# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aminotran_1_2 PF00155.16 gi|15668173|ref|NP_246964.1| - 1.8e-69 234.4 0.0 2e-69 234.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|15668173|ref|NP_246964.1| - 6.1e-11 41.6 0.0 7.6e-11 41.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|15668173|ref|NP_246964.1| - 2.1e-10 39.4 0.1 3.1e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|15668173|ref|NP_246964.1| - 2.2e-10 40.1 0.0 3.2e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|15668173|ref|NP_246964.1| - 3.5e-07 29.6 0.0 6.5e-07 28.7 0.0 1.4 2 0 0 2 2 2 1 Beta-eliminating lyase DUF1246 PF06849.7 gi|15668173|ref|NP_246964.1| - 0.011 15.4 0.6 0.24 11.1 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1246) Aminotran_MocR PF12897.2 gi|15668173|ref|NP_246964.1| - 0.019 13.5 0.1 0.046 12.2 0.0 1.6 1 1 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glyco_hydro_20b PF02838.10 gi|15668173|ref|NP_246964.1| - 0.028 14.9 0.0 0.79 10.2 0.0 2.2 2 0 0 2 2 2 0 Glycosyl hydrolase family 20, domain 2 Met_gamma_lyase PF06838.6 gi|15668173|ref|NP_246964.1| - 0.046 12.0 0.1 0.069 11.4 0.1 1.2 1 0 0 1 1 1 0 Methionine gamma-lyase Nuc-transf PF10127.4 gi|15668174|ref|NP_246965.1| - 1.1e-23 83.8 0.0 1.5e-23 83.4 0.0 1.0 1 0 0 1 1 1 1 Predicted nucleotidyltransferase DUF3804 PF12707.2 gi|15668174|ref|NP_246965.1| - 0.064 12.8 0.6 4.9 6.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3804) DUF523 PF04463.7 gi|15668175|ref|NP_246966.1| - 7e-16 58.2 0.0 9.1e-16 57.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF523) PhnJ PF06007.6 gi|15668175|ref|NP_246966.1| - 0.033 12.9 0.0 0.054 12.2 0.0 1.4 1 1 0 1 1 1 0 Phosphonate metabolism protein PhnJ Tctex-1 PF03645.8 gi|15668175|ref|NP_246966.1| - 0.042 13.6 0.3 0.077 12.8 0.2 1.4 1 0 0 1 1 1 0 Tctex-1 family GyrI-like PF06445.10 gi|15668175|ref|NP_246966.1| - 0.047 13.7 1.3 5.2 7.0 0.0 2.4 2 1 0 2 2 2 0 GyrI-like small molecule binding domain CAP_assoc_N PF14504.1 gi|15668175|ref|NP_246966.1| - 0.053 13.2 1.0 0.09 12.5 0.7 1.3 1 0 0 1 1 1 0 CAP-associated N-terminal DUF4208 PF13907.1 gi|15668175|ref|NP_246966.1| - 0.078 13.1 0.1 0.15 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4208) BcrAD_BadFG PF01869.15 gi|15668176|ref|NP_246967.1| - 1.2e-44 152.6 0.5 2.1e-44 151.8 0.4 1.4 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.16 gi|15668176|ref|NP_246967.1| - 0.0015 17.8 1.0 0.64 9.2 0.1 2.3 2 0 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.11 gi|15668176|ref|NP_246967.1| - 0.0016 18.0 0.0 0.0043 16.7 0.0 1.7 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain DUF1464 PF07318.7 gi|15668176|ref|NP_246967.1| - 0.004 16.0 4.9 0.43 9.3 0.5 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1464) EutA PF06277.6 gi|15668176|ref|NP_246967.1| - 0.0069 15.0 4.7 0.25 9.9 0.3 2.4 1 1 0 2 2 2 2 Ethanolamine utilisation protein EutA Peptidase_M22 PF00814.20 gi|15668176|ref|NP_246967.1| - 0.015 14.8 0.1 0.027 13.9 0.0 1.5 2 0 0 2 2 2 0 Glycoprotease family Phage_CII PF05269.6 gi|15668176|ref|NP_246967.1| - 0.017 15.0 0.6 0.06 13.3 0.1 2.1 2 1 0 2 2 2 0 Bacteriophage CII protein MutL PF13941.1 gi|15668176|ref|NP_246967.1| - 0.028 12.7 1.1 0.49 8.6 0.1 2.6 2 1 1 3 3 3 0 MutL protein PilM_2 PF11104.3 gi|15668176|ref|NP_246967.1| - 0.087 11.6 1.3 6.8 5.4 0.0 2.6 3 0 0 3 3 3 0 Type IV pilus assembly protein PilM; CmcH_NodU PF02543.10 gi|15668176|ref|NP_246967.1| - 0.13 11.3 0.1 0.23 10.5 0.0 1.5 2 0 0 2 2 2 0 Carbamoyltransferase FtsA PF14450.1 gi|15668176|ref|NP_246967.1| - 0.26 11.1 0.2 0.26 11.1 0.1 2.7 2 1 0 2 2 2 0 Cell division protein FtsA Hydant_A_N PF05378.8 gi|15668176|ref|NP_246967.1| - 0.27 10.7 3.7 0.32 10.4 0.1 2.5 2 1 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region FrhB_FdhB_C PF04432.8 gi|15668177|ref|NP_246968.1| - 3e-44 150.2 0.4 3e-44 150.2 0.3 2.0 1 1 1 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|15668177|ref|NP_246968.1| - 9.5e-23 79.8 0.0 1.5e-22 79.2 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.1 gi|15668177|ref|NP_246968.1| - 6.1e-09 35.7 13.4 6.1e-09 35.7 9.3 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668177|ref|NP_246968.1| - 1.1e-05 24.7 16.9 5.9e-05 22.4 1.8 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15668177|ref|NP_246968.1| - 0.00017 21.6 4.7 0.00017 21.6 3.3 3.6 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668177|ref|NP_246968.1| - 0.00024 20.8 20.4 0.00043 20.0 1.2 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668177|ref|NP_246968.1| - 0.0003 21.0 22.3 0.00036 20.8 10.3 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668177|ref|NP_246968.1| - 0.00042 20.0 2.4 0.00042 20.0 1.7 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668177|ref|NP_246968.1| - 0.00051 19.7 2.7 0.00051 19.7 1.9 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668177|ref|NP_246968.1| - 0.00051 20.2 19.6 0.0011 19.1 11.9 2.7 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668177|ref|NP_246968.1| - 0.0019 18.8 11.8 0.11 13.1 0.6 3.4 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain CAP_C PF08603.6 gi|15668177|ref|NP_246968.1| - 0.0052 16.1 4.0 0.078 12.3 0.1 3.0 3 0 0 3 3 3 1 Adenylate cyclase associated (CAP) C terminal Fer4_18 PF13746.1 gi|15668177|ref|NP_246968.1| - 0.0065 16.8 19.9 0.011 16.1 8.8 3.0 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668177|ref|NP_246968.1| - 0.012 16.0 4.4 0.012 16.0 3.1 3.8 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668177|ref|NP_246968.1| - 0.019 15.3 17.3 0.019 15.3 12.0 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668177|ref|NP_246968.1| - 0.039 13.8 0.5 0.039 13.8 0.3 3.3 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668177|ref|NP_246968.1| - 1.2 9.6 17.0 1.9 8.9 2.8 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Molybdopterin PF00384.17 gi|15668178|ref|NP_246969.1| - 7.8e-44 150.0 0.8 6.2e-24 84.5 0.1 2.1 1 1 0 2 2 2 2 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.11 gi|15668178|ref|NP_246969.1| - 2.8e-18 65.4 2.4 5.2e-18 64.6 1.6 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain HGD-D PF06050.8 gi|15668179|ref|NP_246970.1| - 2e-109 365.6 2.7 2.3e-109 365.4 1.9 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component AP_endonuc_2 PF01261.19 gi|15668180|ref|NP_246971.1| - 2.8e-09 36.5 0.0 3.3e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Metalloenzyme PF01676.13 gi|15668182|ref|NP_246973.1| - 1.7e-53 181.6 0.0 2.5e-53 181.0 0.0 1.3 1 0 0 1 1 1 1 Metalloenzyme superfamily PhosphMutase PF10143.4 gi|15668182|ref|NP_246973.1| - 1.2e-47 161.7 0.0 1.9e-47 161.1 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Phosphodiest PF01663.17 gi|15668182|ref|NP_246973.1| - 0.00031 20.2 0.5 0.011 15.0 0.2 2.3 2 1 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|15668182|ref|NP_246973.1| - 0.11 11.6 0.0 0.87 8.7 0.0 2.0 2 0 0 2 2 2 0 Sulfatase Alk_phosphatase PF00245.15 gi|15668182|ref|NP_246973.1| - 0.14 10.7 0.0 0.24 10.0 0.0 1.3 1 0 0 1 1 1 0 Alkaline phosphatase DUF3343 PF11823.3 gi|15668183|ref|NP_246974.1| - 2.5e-20 71.4 0.2 5.1e-20 70.5 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3343) Resolvase PF00239.16 gi|15668185|ref|NP_246977.1| - 1.7e-17 63.5 0.1 2.5e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.2 gi|15668185|ref|NP_246977.1| - 2.7e-10 40.3 0.3 6e-10 39.2 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.18 gi|15668185|ref|NP_246977.1| - 4.2e-09 35.8 0.0 7.4e-09 35.0 0.0 1.4 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.1 gi|15668185|ref|NP_246977.1| - 7.9e-09 35.1 0.9 1.3e-08 34.4 0.1 1.8 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_23 PF13384.1 gi|15668185|ref|NP_246977.1| - 0.00032 20.2 0.1 0.0019 17.7 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|15668185|ref|NP_246977.1| - 0.00099 19.0 0.0 0.0031 17.4 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain DUF3853 PF12964.2 gi|15668185|ref|NP_246977.1| - 0.0034 17.1 0.4 0.02 14.6 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3853) UPF0102 PF02021.12 gi|15668185|ref|NP_246977.1| - 0.016 15.1 5.0 0.06 13.2 0.1 2.9 2 1 1 3 3 3 0 Uncharacterised protein family UPF0102 Glyco_tran_28_C PF04101.11 gi|15668185|ref|NP_246977.1| - 0.022 14.4 0.4 0.036 13.7 0.3 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain HTH_Tnp_ISL3 PF13542.1 gi|15668185|ref|NP_246977.1| - 0.053 12.7 0.0 0.12 11.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 CK_II_beta PF01214.13 gi|15668185|ref|NP_246977.1| - 0.057 12.9 0.8 1.1 8.7 0.5 2.1 1 1 0 1 1 1 0 Casein kinase II regulatory subunit ArsC PF03960.10 gi|15668185|ref|NP_246977.1| - 0.059 13.4 2.6 0.067 13.2 0.2 2.2 3 0 0 3 3 3 0 ArsC family LZ_Tnp_IS481 PF13011.1 gi|15668185|ref|NP_246977.1| - 0.082 13.2 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 P22_AR_C PF10548.4 gi|15668185|ref|NP_246977.1| - 0.092 12.6 0.6 0.36 10.7 0.0 2.3 3 0 0 3 3 3 0 P22AR C-terminal domain Hydrolase_6 PF13344.1 gi|15668186|ref|NP_246978.1| - 0.0017 18.2 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PNK3P PF08645.6 gi|15668186|ref|NP_246978.1| - 0.046 13.1 0.0 0.063 12.7 0.0 1.2 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase CobU PF02283.11 gi|15668186|ref|NP_246978.1| - 0.067 12.6 0.0 0.078 12.3 0.0 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DDE_Tnp_IS240 PF13610.1 gi|15668188|ref|NP_246980.1| - 3.9e-14 52.7 0.0 7e-14 51.9 0.0 1.3 1 0 0 1 1 1 1 DDE domain rve PF00665.21 gi|15668188|ref|NP_246980.1| - 0.00077 19.5 0.0 0.0033 17.5 0.0 1.9 1 1 0 1 1 1 1 Integrase core domain AF0941-like PF14591.1 gi|15668188|ref|NP_246980.1| - 0.056 13.5 1.5 0.093 12.7 1.0 1.4 1 1 0 1 1 1 0 AF0941-like Class_IIIsignal PF04021.7 gi|15668189|ref|NP_246981.1| - 5.5e-07 29.0 3.0 1e-06 28.2 2.1 1.5 1 0 0 1 1 1 1 Class III signal peptide Kinocilin PF15033.1 gi|15668189|ref|NP_246981.1| - 0.051 13.1 1.8 1.7 8.1 1.0 2.5 2 0 0 2 2 2 0 Kinocilin protein GatB_N PF02934.10 gi|15668190|ref|NP_246982.1| - 8.7e-82 274.2 0.5 8.7e-82 274.2 0.4 1.8 2 0 0 2 2 2 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|15668190|ref|NP_246982.1| - 2.1e-32 111.9 2.8 2.1e-32 111.9 1.9 2.8 3 0 0 3 3 3 1 GatB domain GAD PF02938.9 gi|15668190|ref|NP_246982.1| - 1e-24 86.5 0.9 1e-24 86.5 0.6 2.7 2 1 1 3 3 3 1 GAD domain YqeY PF09424.5 gi|15668190|ref|NP_246982.1| - 1.2e-06 28.4 0.4 4e-06 26.7 0.3 2.0 1 0 0 1 1 1 1 Yqey-like protein HHH_5 PF14520.1 gi|15668190|ref|NP_246982.1| - 5.1 7.3 8.5 8.9 6.5 2.9 3.5 3 2 0 3 3 3 0 Helix-hairpin-helix domain Asparaginase PF00710.15 gi|15668191|ref|NP_246983.1| - 3.2e-99 331.7 0.0 3.8e-99 331.4 0.0 1.0 1 0 0 1 1 1 1 Asparaginase RNA_pol_Rpc82 PF05645.8 gi|15668191|ref|NP_246983.1| - 0.088 12.3 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Radical_SAM PF04055.16 gi|15668192|ref|NP_246984.1| - 7.6e-14 52.2 3.2 1.4e-12 48.1 0.2 3.0 2 1 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15668192|ref|NP_246984.1| - 7.1e-10 38.9 0.2 1.9e-09 37.6 0.1 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|15668192|ref|NP_246984.1| - 1.4e-08 34.9 1.8 4.4e-08 33.3 0.5 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain CbiD PF01888.12 gi|15668193|ref|NP_246985.1| - 1.8e-120 400.7 4.7 2.2e-120 400.4 3.3 1.1 1 0 0 1 1 1 1 CbiD DUF1296 PF06972.6 gi|15668193|ref|NP_246985.1| - 0.059 13.3 0.2 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) Archease PF01951.11 gi|15668195|ref|NP_246987.1| - 3.4e-47 159.8 3.4 3.8e-47 159.6 2.4 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) UPF0150 PF03681.10 gi|15668195|ref|NP_246987.1| - 0.0014 18.1 1.1 0.98 9.1 0.0 3.8 4 0 0 4 4 4 1 Uncharacterised protein family (UPF0150) Jag_N PF14804.1 gi|15668195|ref|NP_246987.1| - 0.034 14.1 0.1 1.6 8.8 0.0 2.4 2 0 0 2 2 2 0 Jag N-terminus RTC PF01137.16 gi|15668196|ref|NP_246988.1| - 3.7e-88 294.1 0.1 4.2e-88 293.9 0.1 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.8 gi|15668196|ref|NP_246988.1| - 7.9e-21 74.0 0.1 2.3e-20 72.5 0.1 1.8 2 0 0 2 2 2 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain Nol1_Nop2_Fmu PF01189.12 gi|15668197|ref|NP_246989.1| - 1.3e-94 316.7 0.0 1.5e-94 316.5 0.0 1.0 1 0 0 1 1 1 1 NOL1/NOP2/sun family Methyltransf_31 PF13847.1 gi|15668197|ref|NP_246989.1| - 2.7e-07 30.2 1.9 4.1e-07 29.6 1.3 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|15668197|ref|NP_246989.1| - 3.9e-06 26.9 0.0 5.8e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_15 PF09445.5 gi|15668197|ref|NP_246989.1| - 1.8e-05 24.3 0.1 2.8e-05 23.7 0.1 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.11 gi|15668197|ref|NP_246989.1| - 6.7e-05 22.5 0.7 0.0013 18.3 0.1 2.2 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|15668197|ref|NP_246989.1| - 0.00018 21.5 0.0 0.00024 21.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|15668197|ref|NP_246989.1| - 0.00077 18.5 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|15668197|ref|NP_246989.1| - 0.0011 18.5 0.0 0.0018 17.8 0.0 1.5 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|15668197|ref|NP_246989.1| - 0.0011 18.0 0.1 0.0044 16.0 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase N6_Mtase PF02384.11 gi|15668197|ref|NP_246989.1| - 0.0025 16.9 0.1 0.0036 16.4 0.1 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase Fibrillarin PF01269.12 gi|15668197|ref|NP_246989.1| - 0.0044 15.9 0.0 0.0081 15.1 0.0 1.5 1 0 0 1 1 1 1 Fibrillarin Cons_hypoth95 PF03602.10 gi|15668197|ref|NP_246989.1| - 0.015 14.7 0.0 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Ubie_methyltran PF01209.13 gi|15668197|ref|NP_246989.1| - 0.016 14.3 0.0 0.032 13.3 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|15668197|ref|NP_246989.1| - 0.02 15.2 0.0 0.038 14.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_3 PF01596.12 gi|15668197|ref|NP_246989.1| - 0.031 13.3 0.0 0.059 12.4 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase Exosortase_EpsH PF09721.5 gi|15668198|ref|NP_246990.1| - 5.1e-14 52.1 9.8 6.2e-14 51.8 6.8 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) DUF2417 PF10329.4 gi|15668198|ref|NP_246990.1| - 0.46 9.8 11.9 0.58 9.5 8.2 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) 5TM-5TMR_LYT PF07694.7 gi|15668198|ref|NP_246990.1| - 1.1 8.6 15.4 0.11 11.8 5.9 2.1 2 0 0 2 2 2 0 5TMR of 5TMR-LYT AIRS PF00586.19 gi|15668199|ref|NP_246991.1| - 2.6e-23 82.0 0.0 5.7e-23 80.9 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain HycI PF01750.13 gi|15668200|ref|NP_246993.1| - 4.3e-41 139.4 2.0 5.4e-41 139.1 1.4 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Topo-VIb_trans PF09239.6 gi|15668200|ref|NP_246993.1| - 0.027 13.9 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Topoisomerase VI B subunit, transducer Oxidored_q6 PF01058.17 gi|15668201|ref|NP_246994.1| - 2.1e-32 111.5 3.4 2.1e-32 111.5 2.3 2.2 2 1 1 3 3 3 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|15668201|ref|NP_246994.1| - 1.3e-10 40.4 13.1 1.3e-08 34.1 1.8 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668201|ref|NP_246994.1| - 4.9e-10 39.0 9.9 4.9e-10 39.0 6.9 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668201|ref|NP_246994.1| - 2.2e-07 31.1 10.7 2.2e-07 31.1 7.4 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668201|ref|NP_246994.1| - 6.8e-07 29.4 11.6 6.8e-07 29.4 8.0 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668201|ref|NP_246994.1| - 3.1e-06 26.8 11.0 1.2e-05 24.9 1.5 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668201|ref|NP_246994.1| - 4.2e-06 26.5 25.0 3.7e-05 23.4 8.6 3.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668201|ref|NP_246994.1| - 1.9e-05 24.2 13.7 7.5e-05 22.4 2.1 3.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668201|ref|NP_246994.1| - 7.1e-05 23.4 11.1 0.0016 19.1 0.7 3.1 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668201|ref|NP_246994.1| - 8.7e-05 22.4 24.8 0.00012 21.9 9.5 2.8 3 1 2 5 5 4 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668201|ref|NP_246994.1| - 0.004 17.7 1.2 0.004 17.7 0.9 4.0 4 2 1 5 5 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|15668201|ref|NP_246994.1| - 0.0057 17.0 16.0 0.088 13.2 1.8 3.7 4 0 0 4 4 3 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|15668201|ref|NP_246994.1| - 0.0064 16.7 3.3 0.0064 16.7 2.3 3.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668201|ref|NP_246994.1| - 0.013 15.8 1.6 0.013 15.8 1.1 3.3 4 0 0 4 4 4 0 4Fe-4S dicluster domain FrhB_FdhB_C PF04432.8 gi|15668202|ref|NP_246995.1| - 7e-54 181.5 0.0 1.2e-53 180.7 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|15668202|ref|NP_246995.1| - 1.3e-29 101.8 0.1 2e-29 101.2 0.1 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term FAD_binding_2 PF00890.19 gi|15668203|ref|NP_246996.1| - 5.7e-102 341.6 0.1 7.5e-102 341.2 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 gi|15668203|ref|NP_246996.1| - 1.6e-26 92.6 0.2 6.1e-26 90.7 0.0 1.9 2 0 0 2 2 2 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.9 gi|15668203|ref|NP_246996.1| - 2.2e-09 37.5 0.0 6.9e-08 32.5 0.0 2.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase UPF0051 PF01458.12 gi|15668204|ref|NP_246997.1| - 2.8e-44 151.2 1.2 3.8e-44 150.8 0.8 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.22 gi|15668205|ref|NP_246998.1| - 8.5e-27 94.1 0.0 1.1e-26 93.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|15668205|ref|NP_246998.1| - 2.9e-12 46.3 0.0 3.8e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|15668205|ref|NP_246998.1| - 2.9e-11 43.9 0.8 9.5e-10 38.9 0.5 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|15668205|ref|NP_246998.1| - 3.7e-05 24.1 0.6 5.9e-05 23.4 0.5 1.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|15668205|ref|NP_246998.1| - 0.00098 18.6 0.0 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|15668205|ref|NP_246998.1| - 0.0051 16.2 0.1 0.02 14.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain MutS_V PF00488.16 gi|15668205|ref|NP_246998.1| - 0.012 14.9 0.0 0.65 9.3 0.0 2.1 2 0 0 2 2 2 0 MutS domain V NEMO PF11577.3 gi|15668205|ref|NP_246998.1| - 0.021 14.5 0.2 0.054 13.2 0.1 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO AAA_22 PF13401.1 gi|15668205|ref|NP_246998.1| - 0.026 14.6 0.3 0.23 11.5 0.2 2.1 1 1 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.10 gi|15668205|ref|NP_246998.1| - 0.028 13.0 0.0 0.041 12.5 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein DUF258 PF03193.11 gi|15668205|ref|NP_246998.1| - 0.038 13.1 0.0 0.064 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_14 PF13173.1 gi|15668205|ref|NP_246998.1| - 0.064 13.1 0.5 0.27 11.1 0.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15668205|ref|NP_246998.1| - 0.093 13.5 4.0 1.1 10.0 2.7 2.4 1 1 0 1 1 1 0 AAA domain zf-HC2 PF13490.1 gi|15668205|ref|NP_246998.1| - 0.094 12.6 0.1 0.094 12.6 0.1 2.1 3 0 0 3 3 2 0 Putative zinc-finger AAA_15 PF13175.1 gi|15668205|ref|NP_246998.1| - 0.1 11.6 0.5 0.15 11.0 0.3 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.1 gi|15668205|ref|NP_246998.1| - 0.14 12.0 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|15668205|ref|NP_246998.1| - 0.15 11.5 0.1 0.42 10.0 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA PF00004.24 gi|15668205|ref|NP_246998.1| - 0.22 11.7 0.7 0.85 9.8 0.5 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Ribosomal_S13_N PF08069.7 gi|15668206|ref|NP_246999.1| - 4e-30 103.4 0.3 1e-29 102.1 0.1 1.8 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|15668206|ref|NP_246999.1| - 1.3e-23 82.4 0.4 2.5e-23 81.6 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S15 SAGA-Tad1 PF12767.2 gi|15668206|ref|NP_246999.1| - 0.0083 15.8 0.0 0.01 15.4 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulator of RNA polII, SAGA, subunit HTH_21 PF13276.1 gi|15668206|ref|NP_246999.1| - 0.023 14.6 0.1 0.11 12.5 0.0 2.2 2 0 0 2 2 2 0 HTH-like domain Surf_Ag_VNR PF07244.10 gi|15668206|ref|NP_246999.1| - 0.095 13.1 0.0 4.7 7.6 0.0 2.3 2 0 0 2 2 2 0 Surface antigen variable number repeat RecX PF02631.11 gi|15668206|ref|NP_246999.1| - 0.12 12.5 0.3 7.9 6.7 0.0 2.1 2 0 0 2 2 2 0 RecX family Metallophos PF00149.23 gi|15668207|ref|NP_247000.1| - 4.6e-10 39.2 5.4 1.1e-09 37.9 3.6 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|15668207|ref|NP_247000.1| - 9.6e-06 25.5 0.0 1.4e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF655 PF04919.7 gi|15668208|ref|NP_247001.1| - 4.8e-75 251.2 1.9 5.6e-75 251.0 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.1 gi|15668208|ref|NP_247001.1| - 0.011 15.6 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif Vac_ImportDeg PF09783.4 gi|15668208|ref|NP_247001.1| - 0.17 11.3 1.7 0.22 10.9 1.1 1.3 1 1 0 1 1 1 0 Vacuolar import and degradation protein RNA_pol_Rpb4 PF03874.11 gi|15668209|ref|NP_247002.1| - 1.1e-14 54.3 0.9 1.3e-14 54.1 0.6 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 CDC37_C PF08564.5 gi|15668209|ref|NP_247002.1| - 0.095 12.5 1.0 0.74 9.6 0.1 2.4 1 1 1 3 3 3 0 Cdc37 C terminal domain IF2_N PF04760.10 gi|15668209|ref|NP_247002.1| - 0.099 12.3 0.9 0.099 12.3 0.6 1.9 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HHH_5 PF14520.1 gi|15668209|ref|NP_247002.1| - 0.77 9.9 2.9 15 5.8 1.8 2.3 1 1 1 2 2 2 0 Helix-hairpin-helix domain Ribosomal_L21e PF01157.13 gi|15668210|ref|NP_247003.1| - 4.2e-40 135.5 1.7 4.6e-40 135.4 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e THUMP PF02926.12 gi|15668211|ref|NP_247004.1| - 1.8e-09 37.6 1.8 1.8e-09 37.6 1.3 2.1 2 0 0 2 2 2 1 THUMP domain DUF2202 PF09968.4 gi|15668211|ref|NP_247004.1| - 0.04 13.5 1.1 0.27 10.9 0.1 2.5 2 1 0 3 3 3 0 Uncharacterized protein domain (DUF2202) zinc_ribbon_5 PF13719.1 gi|15668212|ref|NP_247005.1| - 3.1e-06 26.6 0.4 7.4e-06 25.4 0.3 1.7 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668212|ref|NP_247005.1| - 9.5e-06 25.2 0.5 2.4e-05 23.9 0.3 1.8 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|15668212|ref|NP_247005.1| - 7.2e-05 21.8 7.5 0.00029 19.9 3.1 2.8 2 1 0 2 2 2 1 zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|15668212|ref|NP_247005.1| - 0.00028 20.3 1.8 0.0011 18.4 1.1 2.3 1 1 1 2 2 2 1 Ribosomal protein S27 Mu-like_Com PF10122.4 gi|15668212|ref|NP_247005.1| - 0.0014 17.6 0.1 0.22 10.5 0.0 2.5 2 0 0 2 2 2 1 Mu-like prophage protein Com zf-C4_Topoisom PF01396.14 gi|15668212|ref|NP_247005.1| - 0.002 17.5 1.7 1.1 8.8 0.2 2.5 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger Lar_restr_allev PF14354.1 gi|15668212|ref|NP_247005.1| - 0.01 16.1 4.1 0.16 12.3 2.8 2.8 1 1 0 1 1 1 1 Restriction alleviation protein Lar RNHCP PF12647.2 gi|15668212|ref|NP_247005.1| - 0.017 14.9 0.1 0.054 13.3 0.0 1.8 2 0 0 2 2 2 0 RNHCP domain zf-Mss51 PF13824.1 gi|15668212|ref|NP_247005.1| - 0.018 14.8 2.9 2.9 7.8 0.2 2.7 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zinc_ribbon_2 PF13240.1 gi|15668212|ref|NP_247005.1| - 0.021 14.2 7.1 0.37 10.3 0.2 2.8 3 0 0 3 3 2 0 zinc-ribbon domain GFA PF04828.9 gi|15668212|ref|NP_247005.1| - 0.021 14.7 0.6 1.7 8.6 0.0 2.6 2 1 1 3 3 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF329 PF03884.9 gi|15668212|ref|NP_247005.1| - 0.034 13.7 1.8 5.7 6.5 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF329) DZR PF12773.2 gi|15668212|ref|NP_247005.1| - 0.039 13.7 0.8 0.085 12.6 0.2 1.8 2 1 0 2 2 1 0 Double zinc ribbon IBR PF01485.16 gi|15668212|ref|NP_247005.1| - 0.04 13.8 0.6 0.079 12.8 0.4 1.5 1 0 0 1 1 1 0 IBR domain zf-ISL3 PF14690.1 gi|15668212|ref|NP_247005.1| - 0.04 13.9 1.7 2.8 8.0 0.0 2.9 3 0 0 3 3 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1 PF03811.8 gi|15668212|ref|NP_247005.1| - 0.056 12.9 1.1 8.4 5.9 0.1 2.3 2 0 0 2 2 2 0 InsA N-terminal domain Zn_Tnp_IS1595 PF12760.2 gi|15668212|ref|NP_247005.1| - 0.067 13.0 0.5 5.3 6.9 0.0 2.5 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF1817 PF08847.6 gi|15668212|ref|NP_247005.1| - 0.074 12.6 0.0 0.16 11.5 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1817) DUF35_N PF12172.3 gi|15668212|ref|NP_247005.1| - 0.075 12.9 0.4 5.4 7.0 0.0 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) B5 PF03484.10 gi|15668212|ref|NP_247005.1| - 0.075 12.8 0.3 0.5 10.2 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetase B5 domain DNA_RNApol_7kD PF03604.8 gi|15668212|ref|NP_247005.1| - 0.087 12.3 0.4 10 5.6 0.0 2.6 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-tcix PF14952.1 gi|15668212|ref|NP_247005.1| - 0.1 11.9 5.9 1.9 7.8 0.6 2.5 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Ogr_Delta PF04606.7 gi|15668212|ref|NP_247005.1| - 0.15 11.7 0.8 7.5 6.2 0.0 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger CpXC PF14353.1 gi|15668212|ref|NP_247005.1| - 0.19 11.7 1.5 2.7 7.9 0.0 2.7 1 1 1 2 2 2 0 CpXC protein zf-CSL PF05207.8 gi|15668212|ref|NP_247005.1| - 0.26 10.8 2.9 4.3 6.9 0.9 3.0 2 1 0 2 2 2 0 CSL zinc finger UPF0547 PF10571.4 gi|15668212|ref|NP_247005.1| - 0.32 10.7 6.0 4.1 7.1 4.1 2.3 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.5 gi|15668212|ref|NP_247005.1| - 0.51 10.3 7.0 1.4 8.9 3.3 2.6 2 1 0 2 2 1 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.11 gi|15668212|ref|NP_247005.1| - 0.52 10.0 5.6 3.9 7.2 0.1 2.7 3 0 0 3 3 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-CCHC_6 PF15288.1 gi|15668212|ref|NP_247005.1| - 3.3 7.4 6.5 12 5.6 0.2 2.8 3 0 0 3 3 2 0 Zinc knuckle TF_Zn_Ribbon PF08271.7 gi|15668212|ref|NP_247005.1| - 3.9 6.8 8.8 14 5.1 0.5 2.8 2 1 1 3 3 3 0 TFIIB zinc-binding PT-HINT PF07591.6 gi|15668213|ref|NP_247006.1| - 1e-05 25.4 2.6 0.00013 21.8 0.1 3.2 4 0 0 4 4 4 1 Pretoxin HINT domain Intein_splicing PF14890.1 gi|15668213|ref|NP_247006.1| - 0.00057 18.8 0.0 0.002 17.0 0.0 1.8 1 1 0 1 1 1 1 Intein splicing domain PHP PF02811.14 gi|15668213|ref|NP_247006.1| - 0.00081 19.2 0.2 0.0023 17.7 0.0 1.9 2 1 0 2 2 2 1 PHP domain PHP_C PF13263.1 gi|15668213|ref|NP_247006.1| - 0.0019 17.6 0.0 0.0043 16.5 0.0 1.6 1 0 0 1 1 1 1 PHP-associated Hint_2 PF13403.1 gi|15668213|ref|NP_247006.1| - 0.0021 17.9 0.0 0.0042 17.0 0.0 1.5 1 0 0 1 1 1 1 Hint domain HypA PF01155.14 gi|15668213|ref|NP_247006.1| - 0.017 14.7 0.1 0.044 13.4 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Hint PF01079.15 gi|15668213|ref|NP_247006.1| - 0.059 12.5 0.0 0.16 11.1 0.0 1.6 1 1 0 1 1 1 0 Hint module Vint PF14623.1 gi|15668213|ref|NP_247006.1| - 0.1 12.0 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Hint-domain zinc_ribbon_5 PF13719.1 gi|15668213|ref|NP_247006.1| - 0.13 11.8 7.5 0.025 14.1 1.6 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668213|ref|NP_247006.1| - 0.19 11.4 7.4 0.044 13.4 1.6 2.6 2 0 0 2 2 2 0 zinc-ribbon domain AA_kinase PF00696.23 gi|15668214|ref|NP_247007.1| - 1.6e-42 145.6 0.0 1.8e-42 145.5 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family AAA_21 PF13304.1 gi|15668215|ref|NP_247008.1| - 0.34 10.8 13.1 0.43 10.4 9.1 1.2 1 0 0 1 1 1 0 AAA domain Poxvirus_B22R_N PF13169.1 gi|15668215|ref|NP_247008.1| - 2.7 8.2 8.3 1e+02 3.2 5.8 2.5 1 1 0 1 1 1 0 Poxvirus B22R protein N-terminal Methyltransf_10 PF05971.7 gi|15668216|ref|NP_247009.1| - 3.4e-14 52.6 0.1 6.8e-14 51.7 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF890) MTS PF05175.9 gi|15668216|ref|NP_247009.1| - 8.7e-11 41.4 0.0 2.4e-10 40.0 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|15668216|ref|NP_247009.1| - 1.5e-09 37.6 0.7 3.7e-09 36.3 0.5 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15668216|ref|NP_247009.1| - 1.1e-08 35.0 0.0 1.4e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668216|ref|NP_247009.1| - 1.2e-08 35.5 0.0 1.9e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|15668216|ref|NP_247009.1| - 1.3e-07 31.0 0.0 1.9e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.1 gi|15668216|ref|NP_247009.1| - 1.8e-06 28.2 0.0 3.1e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15668216|ref|NP_247009.1| - 6.1e-06 26.6 0.1 1.6e-05 25.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|15668216|ref|NP_247009.1| - 1.7e-05 25.1 0.0 4.3e-05 23.9 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|15668216|ref|NP_247009.1| - 3.8e-05 23.2 0.0 6.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase RrnaAD PF00398.15 gi|15668216|ref|NP_247009.1| - 0.00012 21.1 0.0 0.00017 20.6 0.0 1.4 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase UPF0020 PF01170.13 gi|15668216|ref|NP_247009.1| - 0.00058 19.4 0.0 0.00086 18.9 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Met_10 PF02475.11 gi|15668216|ref|NP_247009.1| - 0.00061 19.4 0.0 0.0011 18.5 0.0 1.6 1 0 0 1 1 1 1 Met-10+ like-protein Spermine_synth PF01564.12 gi|15668216|ref|NP_247009.1| - 0.0032 16.4 0.6 0.02 13.8 0.4 2.0 1 1 0 1 1 1 1 Spermine/spermidine synthase DUF633 PF04816.7 gi|15668216|ref|NP_247009.1| - 0.0055 16.0 1.2 0.0067 15.7 0.1 1.7 2 0 0 2 2 2 1 Family of unknown function (DUF633) Cons_hypoth95 PF03602.10 gi|15668216|ref|NP_247009.1| - 0.008 15.5 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_3 PF01596.12 gi|15668216|ref|NP_247009.1| - 0.0088 15.1 0.1 0.019 14.0 0.0 1.5 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_4 PF02390.12 gi|15668216|ref|NP_247009.1| - 0.026 13.5 0.0 0.048 12.7 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_23 PF13489.1 gi|15668216|ref|NP_247009.1| - 0.043 13.5 0.0 0.055 13.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Beta-Casp PF10996.3 gi|15668217|ref|NP_247010.1| - 2.1e-26 92.3 0.1 4e-26 91.4 0.1 1.5 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|15668217|ref|NP_247010.1| - 3.3e-19 69.3 0.1 5.9e-19 68.4 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|15668217|ref|NP_247010.1| - 6.5e-15 55.1 0.6 1.9e-14 53.7 0.2 1.8 2 1 1 3 3 3 1 Beta-lactamase superfamily domain RMMBL PF07521.7 gi|15668217|ref|NP_247010.1| - 1.1e-07 31.5 0.0 2.3e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|15668217|ref|NP_247010.1| - 0.00084 19.0 0.2 0.0047 16.6 0.0 2.2 2 1 1 3 3 3 1 Beta-lactamase superfamily domain eIF-6 PF01912.13 gi|15668219|ref|NP_247012.1| - 2.2e-66 222.7 3.2 2.6e-66 222.5 2.2 1.0 1 0 0 1 1 1 1 eIF-6 family DUF1371 PF07115.6 gi|15668219|ref|NP_247012.1| - 0.0006 19.9 0.6 0.0012 19.0 0.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1371) Ribosomal_L31e PF01198.14 gi|15668220|ref|NP_247013.1| - 9e-29 98.9 5.3 1.1e-28 98.7 3.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e Pyridoxal_deC PF00282.14 gi|15668221|ref|NP_247014.1| - 2e-28 98.9 0.0 2.7e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_1_2 PF00155.16 gi|15668221|ref|NP_247014.1| - 3.9e-10 39.2 0.1 0.00036 19.6 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|15668221|ref|NP_247014.1| - 4.2e-09 35.6 0.0 1.5e-07 30.4 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|15668221|ref|NP_247014.1| - 0.00014 21.1 0.0 0.00019 20.6 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase GDC-P PF02347.11 gi|15668221|ref|NP_247014.1| - 0.0029 16.3 0.0 0.12 11.0 0.0 2.2 2 0 0 2 2 2 1 Glycine cleavage system P-protein Radical_SAM PF04055.16 gi|15668221|ref|NP_247014.1| - 0.03 14.4 2.1 0.76 9.9 0.1 3.3 2 2 0 2 2 2 0 Radical SAM superfamily DegT_DnrJ_EryC1 PF01041.12 gi|15668221|ref|NP_247014.1| - 0.11 11.5 0.0 0.28 10.1 0.0 1.6 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family PTH2 PF01981.11 gi|15668222|ref|NP_247015.1| - 7.5e-48 161.0 0.1 8.3e-48 160.8 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Rhodanese PF00581.15 gi|15668223|ref|NP_247016.1| - 2.1e-19 69.8 0.0 7.7e-19 68.1 0.0 1.9 1 1 0 1 1 1 1 Rhodanese-like domain B5 PF03484.10 gi|15668223|ref|NP_247016.1| - 0.0072 16.1 1.6 2.6 7.9 0.0 3.0 3 0 0 3 3 3 2 tRNA synthetase B5 domain AAA_18 PF13238.1 gi|15668224|ref|NP_247017.1| - 1.3e-06 28.7 1.1 1.3e-06 28.7 0.7 2.2 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15668224|ref|NP_247017.1| - 9e-06 26.5 3.5 6.3e-05 23.7 2.4 2.2 1 1 0 1 1 1 1 AAA domain FlbT PF07378.6 gi|15668224|ref|NP_247017.1| - 0.0028 17.4 0.7 0.005 16.6 0.5 1.4 1 0 0 1 1 1 1 Flagellar protein FlbT KAP_NTPase PF07693.9 gi|15668224|ref|NP_247017.1| - 0.015 14.2 0.0 0.019 13.9 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain CoaE PF01121.15 gi|15668224|ref|NP_247017.1| - 0.02 14.3 0.0 0.48 9.7 0.0 2.3 2 1 0 2 2 2 0 Dephospho-CoA kinase ABC_tran PF00005.22 gi|15668224|ref|NP_247017.1| - 0.036 14.3 0.7 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 ABC transporter MMR_HSR1 PF01926.18 gi|15668224|ref|NP_247017.1| - 0.041 13.8 0.1 0.11 12.4 0.0 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.1 gi|15668224|ref|NP_247017.1| - 0.11 12.6 0.1 0.29 11.2 0.0 1.8 2 1 0 2 2 2 0 AAA domain DUF2099 PF09872.4 gi|15668225|ref|NP_247018.1| - 5.8e-115 382.7 7.0 6.6e-115 382.5 4.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) DHBP_synthase PF00926.14 gi|15668226|ref|NP_247019.1| - 4.3e-72 241.4 0.0 4.8e-72 241.2 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase TctC PF03401.9 gi|15668226|ref|NP_247019.1| - 0.044 12.6 0.0 0.067 12.1 0.0 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter family receptor CTP-dep_RFKase PF01982.11 gi|15668227|ref|NP_247020.1| - 1.6e-39 134.2 0.1 1.9e-39 134.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF120 Antitoxin-MazE PF04014.13 gi|15668227|ref|NP_247020.1| - 0.012 15.3 0.6 0.049 13.3 0.1 2.1 2 0 0 2 2 2 0 Antidote-toxin recognition MazE Na_H_Exchanger PF00999.16 gi|15668228|ref|NP_247021.1| - 8.2e-52 175.9 35.8 1.1e-51 175.6 24.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family OST3_OST6 PF04756.8 gi|15668228|ref|NP_247021.1| - 0.22 11.0 6.6 0.04 13.4 1.4 2.1 2 0 0 2 2 2 0 OST3 / OST6 family Ammonium_transp PF00909.16 gi|15668229|ref|NP_247022.1| - 4.4e-106 354.7 31.4 5.1e-106 354.5 21.8 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DDDD PF10161.4 gi|15668229|ref|NP_247022.1| - 0.035 13.7 1.1 7.1 6.3 0.1 3.1 2 0 0 2 2 2 0 Putative mitochondrial precursor protein P-II PF00543.17 gi|15668230|ref|NP_247023.1| - 3.1e-40 136.7 3.2 3.5e-40 136.6 2.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Nit_Regul_Hom PF10126.4 gi|15668230|ref|NP_247023.1| - 0.064 13.0 0.4 7.2 6.4 0.0 2.3 1 1 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF1449 PF07290.6 gi|15668230|ref|NP_247023.1| - 0.12 11.7 0.1 0.13 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) PNP_UDP_1 PF01048.15 gi|15668231|ref|NP_247024.1| - 7.6e-47 159.2 0.0 8.5e-47 159.0 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Fer4 PF00037.22 gi|15668232|ref|NP_247025.1| - 1.4e-11 43.4 12.6 2.5e-06 26.8 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668232|ref|NP_247025.1| - 4.4e-11 42.1 12.6 2.8e-06 26.9 1.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668232|ref|NP_247025.1| - 6.9e-09 35.9 23.4 1.1e-06 28.8 9.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668232|ref|NP_247025.1| - 2.3e-07 30.4 14.3 4.9e-07 29.4 10.0 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668232|ref|NP_247025.1| - 5.7e-07 29.6 14.0 5.7e-07 29.6 9.7 1.4 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668232|ref|NP_247025.1| - 7.1e-07 28.7 11.8 0.00073 19.3 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668232|ref|NP_247025.1| - 3.8e-06 27.1 7.0 0.011 16.0 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668232|ref|NP_247025.1| - 2.6e-05 23.9 12.6 4.1e-05 23.3 8.7 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668232|ref|NP_247025.1| - 0.00041 21.0 11.9 0.024 15.3 1.5 2.3 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15668232|ref|NP_247025.1| - 0.00063 19.8 15.2 0.091 13.1 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668232|ref|NP_247025.1| - 0.0015 18.5 13.2 0.081 12.9 9.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain zf-ribbon_3 PF13248.1 gi|15668232|ref|NP_247025.1| - 0.0056 15.8 2.3 0.33 10.1 0.2 2.6 2 0 0 2 2 2 1 zinc-ribbon domain Fer4_11 PF13247.1 gi|15668232|ref|NP_247025.1| - 0.013 15.3 6.3 0.016 15.0 4.4 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668232|ref|NP_247025.1| - 0.026 15.0 13.3 0.046 14.2 2.3 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668232|ref|NP_247025.1| - 0.078 13.5 10.1 0.19 12.2 0.5 2.1 1 1 1 2 2 2 0 4Fe-4S single cluster domain DNA_pol3_a_NII PF11490.3 gi|15668232|ref|NP_247025.1| - 0.11 12.0 3.2 0.076 12.6 1.1 1.5 1 1 0 1 1 1 0 DNA polymerase III polC-type N-terminus II Fer4_13 PF13370.1 gi|15668232|ref|NP_247025.1| - 0.37 11.2 11.6 0.21 11.9 1.0 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15668232|ref|NP_247025.1| - 1.1 9.7 15.4 0.53 10.7 2.9 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain TNFR_c6 PF00020.13 gi|15668232|ref|NP_247025.1| - 1.2 9.2 10.5 1.6 8.8 1.0 2.2 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region DUF678 PF05077.7 gi|15668232|ref|NP_247025.1| - 9 6.3 11.2 9.3 6.3 1.5 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF678) Sua5_yciO_yrdC PF01300.13 gi|15668233|ref|NP_247026.1| - 1e-49 168.1 0.1 1.2e-49 167.9 0.1 1.1 1 0 0 1 1 1 1 Telomere recombination MCPsignal PF00015.16 gi|15668234|ref|NP_247027.1| - 0.0028 17.2 6.4 0.011 15.3 4.4 1.8 1 1 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF948 PF06103.6 gi|15668234|ref|NP_247027.1| - 0.018 14.8 1.8 0.018 14.8 1.2 2.9 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.4 gi|15668234|ref|NP_247027.1| - 0.038 14.1 20.9 0.92 9.6 4.2 3.2 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin-6_N PF09177.6 gi|15668234|ref|NP_247027.1| - 0.043 14.2 11.1 0.16 12.3 1.6 2.7 1 1 1 2 2 2 0 Syntaxin 6, N-terminal T4SS PF07996.6 gi|15668234|ref|NP_247027.1| - 0.056 13.2 3.2 0.11 12.3 2.3 1.6 1 1 0 1 1 1 0 Type IV secretion system proteins WXG100 PF06013.7 gi|15668234|ref|NP_247027.1| - 0.063 13.2 0.5 11 6.0 0.0 3.3 3 0 0 3 3 3 0 Proteins of 100 residues with WXG GrpE PF01025.14 gi|15668234|ref|NP_247027.1| - 0.064 12.8 13.3 0.63 9.5 4.2 3.0 1 1 1 2 2 2 0 GrpE Spc7 PF08317.6 gi|15668234|ref|NP_247027.1| - 0.11 11.1 20.1 0.035 12.7 7.5 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Baculo_PEP_C PF04513.7 gi|15668234|ref|NP_247027.1| - 0.22 11.3 16.9 0.037 13.8 6.0 2.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.7 gi|15668234|ref|NP_247027.1| - 0.26 11.0 10.9 0.41 10.4 2.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Reo_sigmaC PF04582.7 gi|15668234|ref|NP_247027.1| - 0.27 10.3 6.6 0.29 10.2 2.8 2.0 1 1 1 2 2 2 0 Reovirus sigma C capsid protein MitMem_reg PF13012.1 gi|15668234|ref|NP_247027.1| - 0.28 11.2 9.6 0.1 12.7 3.7 2.2 1 1 1 2 2 2 0 Maintenance of mitochondrial structure and function Prominin PF05478.6 gi|15668234|ref|NP_247027.1| - 0.29 8.6 12.2 0.091 10.2 3.2 2.0 1 1 1 2 2 2 0 Prominin BMFP PF04380.8 gi|15668234|ref|NP_247027.1| - 0.31 11.2 3.7 6.8 6.8 0.3 3.2 2 1 0 2 2 2 0 Membrane fusogenic activity Occludin_ELL PF07303.8 gi|15668234|ref|NP_247027.1| - 0.32 11.7 7.2 1.6 9.4 1.3 2.4 1 1 1 2 2 2 0 Occludin homology domain FCH PF00611.18 gi|15668234|ref|NP_247027.1| - 0.42 10.8 3.2 3.2 8.0 0.1 3.2 2 1 1 3 3 3 0 Fes/CIP4, and EFC/F-BAR homology domain DUF2408 PF10303.4 gi|15668234|ref|NP_247027.1| - 0.42 10.7 11.9 3 7.9 8.3 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) DivIVA PF05103.8 gi|15668234|ref|NP_247027.1| - 0.54 10.3 14.0 1.8 8.6 4.7 2.7 1 1 0 2 2 2 0 DivIVA protein ADIP PF11559.3 gi|15668234|ref|NP_247027.1| - 0.76 9.6 14.8 0.12 12.2 5.1 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Tweety PF04906.8 gi|15668234|ref|NP_247027.1| - 0.86 7.9 3.2 0.75 8.1 1.5 1.4 1 1 0 1 1 1 0 Tweety Nup88 PF10168.4 gi|15668234|ref|NP_247027.1| - 0.97 7.1 11.2 0.058 11.2 2.9 1.9 1 1 1 2 2 2 0 Nuclear pore component THOC7 PF05615.8 gi|15668234|ref|NP_247027.1| - 1 9.5 9.9 9.1 6.5 6.9 2.3 1 1 0 1 1 1 0 Tho complex subunit 7 AATF-Che1 PF13339.1 gi|15668234|ref|NP_247027.1| - 1.1 9.4 5.9 1.8 8.7 0.7 2.3 1 1 0 2 2 2 0 Apoptosis antagonizing transcription factor LAGLIDADG_WhiA PF14527.1 gi|15668234|ref|NP_247027.1| - 1.3 8.9 5.2 1.5 8.7 0.8 2.6 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain OEP PF02321.13 gi|15668234|ref|NP_247027.1| - 1.4 8.4 4.9 1.7 8.1 0.2 2.3 2 0 0 2 2 2 0 Outer membrane efflux protein NPV_P10 PF05531.7 gi|15668234|ref|NP_247027.1| - 1.4 9.1 13.4 3.5 7.9 0.2 3.4 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF724 PF05266.9 gi|15668234|ref|NP_247027.1| - 1.7 8.2 12.9 0.25 10.9 1.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF724) Orbi_VP5 PF00901.12 gi|15668234|ref|NP_247027.1| - 1.8 6.6 9.5 3.4 5.7 6.5 1.6 1 1 0 1 1 1 0 Orbivirus outer capsid protein VP5 Fib_alpha PF08702.5 gi|15668234|ref|NP_247027.1| - 2.7 8.1 12.3 0.38 10.8 4.0 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.7 gi|15668234|ref|NP_247027.1| - 2.8 7.6 14.9 3.8 7.2 3.4 2.4 1 1 1 2 2 2 0 Laminin Domain II KxDL PF10241.4 gi|15668234|ref|NP_247027.1| - 3 7.8 7.5 4 7.4 0.6 3.1 1 1 3 4 4 4 0 Uncharacterized conserved protein GLTP PF08718.6 gi|15668234|ref|NP_247027.1| - 3.9 7.4 6.3 4.5 7.3 1.2 2.5 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) bZIP_1 PF00170.16 gi|15668234|ref|NP_247027.1| - 4.3 7.3 16.2 3.2 7.7 0.3 3.7 2 1 1 3 3 3 0 bZIP transcription factor Fzo_mitofusin PF04799.8 gi|15668234|ref|NP_247027.1| - 5.1 6.4 15.7 0.83 9.0 0.5 3.0 1 1 2 3 3 3 0 fzo-like conserved region LOH1CR12 PF10158.4 gi|15668234|ref|NP_247027.1| - 5.8 6.7 8.9 2.6 7.8 0.4 2.5 1 1 1 2 2 2 0 Tumour suppressor protein DUF2935 PF11155.3 gi|15668234|ref|NP_247027.1| - 8.7 6.4 12.8 2.5 8.1 2.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) DUF1664 PF07889.7 gi|15668235|ref|NP_247028.1| - 0.001 18.8 13.9 0.1 12.3 1.3 3.0 1 1 2 3 3 3 2 Protein of unknown function (DUF1664) Lsr2 PF11774.3 gi|15668235|ref|NP_247028.1| - 0.0016 18.3 0.2 0.0027 17.6 0.1 1.4 1 0 0 1 1 1 1 Lsr2 MCPsignal PF00015.16 gi|15668235|ref|NP_247028.1| - 0.0018 17.8 9.3 0.014 14.9 4.0 2.1 1 1 1 2 2 2 2 Methyl-accepting chemotaxis protein (MCP) signalling domain YjcZ PF13990.1 gi|15668235|ref|NP_247028.1| - 0.0039 16.3 3.7 0.026 13.6 0.9 2.0 1 1 1 2 2 2 1 YjcZ-like protein DUF4164 PF13747.1 gi|15668235|ref|NP_247028.1| - 0.0042 17.1 6.7 0.46 10.6 0.1 3.1 2 1 0 3 3 3 1 Domain of unknown function (DUF4164) APG6 PF04111.7 gi|15668235|ref|NP_247028.1| - 0.0061 15.6 9.2 0.0075 15.3 6.4 1.2 1 0 0 1 1 1 1 Autophagy protein Apg6 Spc7 PF08317.6 gi|15668235|ref|NP_247028.1| - 0.0064 15.1 18.4 0.0082 14.8 12.7 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Laminin_II PF06009.7 gi|15668235|ref|NP_247028.1| - 0.0069 16.1 13.7 0.026 14.2 3.9 2.1 1 1 1 2 2 2 1 Laminin Domain II IFT57 PF10498.4 gi|15668235|ref|NP_247028.1| - 0.017 13.8 15.8 0.011 14.4 9.6 1.6 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Tropomyosin PF00261.15 gi|15668235|ref|NP_247028.1| - 0.02 13.9 9.8 0.029 13.4 6.8 1.2 1 0 0 1 1 1 0 Tropomyosin Snapin_Pallidin PF14712.1 gi|15668235|ref|NP_247028.1| - 0.034 14.4 11.8 1.9 8.8 0.1 3.2 2 1 1 3 3 3 0 Snapin/Pallidin Serine_rich PF08824.5 gi|15668235|ref|NP_247028.1| - 0.039 13.6 5.2 0.15 11.8 1.9 2.5 1 1 2 3 3 3 0 Serine rich protein interaction domain Bacillus_HBL PF05791.6 gi|15668235|ref|NP_247028.1| - 0.043 13.1 14.9 0.05 12.9 4.3 2.1 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) DUF745 PF05335.8 gi|15668235|ref|NP_247028.1| - 0.046 13.2 3.8 0.056 12.9 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) APG17 PF04108.7 gi|15668235|ref|NP_247028.1| - 0.06 12.1 13.5 0.088 11.5 3.1 2.1 1 1 1 2 2 2 0 Autophagy protein Apg17 Myosin_tail_1 PF01576.14 gi|15668235|ref|NP_247028.1| - 0.068 10.8 10.0 0.11 10.1 6.9 1.3 1 0 0 1 1 1 0 Myosin tail E2R135 PF11570.3 gi|15668235|ref|NP_247028.1| - 0.075 13.1 0.2 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 rve_2 PF13333.1 gi|15668235|ref|NP_247028.1| - 0.085 12.9 1.2 7.1 6.7 0.1 2.7 1 1 1 2 2 2 0 Integrase core domain Nup54 PF13874.1 gi|15668235|ref|NP_247028.1| - 0.088 12.4 6.6 1.4 8.6 0.2 2.8 1 1 2 3 3 3 0 Nucleoporin complex subunit 54 ALIX_LYPXL_bnd PF13949.1 gi|15668235|ref|NP_247028.1| - 0.089 11.7 12.6 2.8 6.8 8.5 2.6 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV Glu-tRNAGln PF02686.10 gi|15668235|ref|NP_247028.1| - 0.13 12.1 0.6 0.36 10.6 0.4 2.0 1 1 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit FliJ PF02050.11 gi|15668235|ref|NP_247028.1| - 0.13 12.3 3.0 1.5 8.8 0.3 2.8 1 1 1 2 2 2 0 Flagellar FliJ protein Baculo_PEP_C PF04513.7 gi|15668235|ref|NP_247028.1| - 0.18 11.6 15.9 2.8e+02 1.2 11.0 2.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus RHH_1 PF01402.16 gi|15668235|ref|NP_247028.1| - 0.18 11.7 0.2 0.18 11.7 0.1 2.4 2 1 0 2 2 2 0 Ribbon-helix-helix protein, copG family TMPIT PF07851.8 gi|15668235|ref|NP_247028.1| - 0.28 10.2 10.8 0.14 11.1 5.4 1.8 1 1 1 2 2 2 0 TMPIT-like protein RRF_GI PF12614.3 gi|15668235|ref|NP_247028.1| - 0.29 10.9 7.8 0.23 11.2 2.0 2.5 1 1 0 2 2 2 0 Ribosome recycling factor Mod_r PF07200.8 gi|15668235|ref|NP_247028.1| - 0.29 11.0 10.3 0.11 12.3 4.6 2.0 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Sec5 PF15469.1 gi|15668235|ref|NP_247028.1| - 0.29 10.8 15.4 0.052 13.2 3.6 2.1 1 1 1 2 2 2 0 Exocyst complex component Sec5 Reo_sigmaC PF04582.7 gi|15668235|ref|NP_247028.1| - 0.31 10.1 12.1 0.48 9.5 4.6 2.0 1 1 1 2 2 2 0 Reovirus sigma C capsid protein Endotoxin_N PF03945.9 gi|15668235|ref|NP_247028.1| - 0.33 10.3 5.4 0.23 10.8 2.0 1.9 1 1 1 2 2 2 0 delta endotoxin, N-terminal domain Fib_alpha PF08702.5 gi|15668235|ref|NP_247028.1| - 0.36 10.9 14.5 2.2 8.3 4.7 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family SlyX PF04102.7 gi|15668235|ref|NP_247028.1| - 0.36 11.2 7.1 14 6.0 0.5 3.6 1 1 3 4 4 4 0 SlyX Syntaxin-6_N PF09177.6 gi|15668235|ref|NP_247028.1| - 0.38 11.1 10.2 0.66 10.4 3.2 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Laminin_I PF06008.9 gi|15668235|ref|NP_247028.1| - 0.38 10.0 13.3 0.15 11.3 5.8 2.0 1 1 1 2 2 2 0 Laminin Domain I DUF4298 PF14131.1 gi|15668235|ref|NP_247028.1| - 0.42 10.5 5.6 7.7 6.4 0.1 3.0 3 1 1 4 4 3 0 Domain of unknown function (DUF4298) FimP PF09766.4 gi|15668235|ref|NP_247028.1| - 0.47 9.4 12.7 0.6 9.1 8.8 1.1 1 0 0 1 1 1 0 Fms-interacting protein DUF948 PF06103.6 gi|15668235|ref|NP_247028.1| - 0.53 10.1 13.0 0.19 11.6 2.3 3.0 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Alpha-2-MRAP_C PF06401.6 gi|15668235|ref|NP_247028.1| - 0.54 10.0 12.6 0.21 11.4 6.5 1.8 1 1 1 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain HAUS-augmin3 PF14932.1 gi|15668235|ref|NP_247028.1| - 0.54 9.3 11.4 0.86 8.7 7.9 1.4 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 DUF3450 PF11932.3 gi|15668235|ref|NP_247028.1| - 0.61 9.3 4.7 0.51 9.5 2.0 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) Rabaptin PF03528.10 gi|15668235|ref|NP_247028.1| - 0.72 9.7 8.1 0.23 11.3 0.8 2.6 2 1 0 2 2 2 0 Rabaptin DivIVA PF05103.8 gi|15668235|ref|NP_247028.1| - 0.72 9.9 11.6 17 5.4 7.0 2.6 1 1 0 1 1 1 0 DivIVA protein DUF3810 PF12725.2 gi|15668235|ref|NP_247028.1| - 0.74 8.6 7.0 0.67 8.7 3.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Tweety PF04906.8 gi|15668235|ref|NP_247028.1| - 0.81 8.0 6.1 3.2 6.0 4.1 1.9 1 1 0 1 1 1 0 Tweety EAP30 PF04157.11 gi|15668235|ref|NP_247028.1| - 0.82 8.7 5.6 1.1 8.3 0.8 2.2 1 1 1 2 2 2 0 EAP30/Vps36 family IFT46_B_C PF12317.3 gi|15668235|ref|NP_247028.1| - 0.86 8.9 10.9 2.5 7.4 2.8 2.6 1 1 2 3 3 3 0 Intraflagellar transport complex B protein 46 C terminal SNARE PF05739.14 gi|15668235|ref|NP_247028.1| - 1.1 9.0 5.5 1.5 8.5 0.1 3.2 2 2 0 3 3 3 0 SNARE domain Transposase_22 PF02994.9 gi|15668235|ref|NP_247028.1| - 1.1 7.6 13.1 1.5 7.2 9.1 1.2 1 0 0 1 1 1 0 L1 transposable element CENP-F_leu_zip PF10473.4 gi|15668235|ref|NP_247028.1| - 1.2 8.9 15.2 0.62 9.9 6.9 2.3 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DASH_Dad4 PF08650.5 gi|15668235|ref|NP_247028.1| - 1.3 8.9 13.6 0.12 12.2 1.4 3.1 1 1 1 3 3 3 0 DASH complex subunit Dad4 DUF1451 PF07295.6 gi|15668235|ref|NP_247028.1| - 1.3 8.7 5.4 0.37 10.5 1.8 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF1451) IncA PF04156.9 gi|15668235|ref|NP_247028.1| - 1.3 8.5 13.4 12 5.3 9.3 2.0 1 1 0 1 1 1 0 IncA protein Spectrin PF00435.16 gi|15668235|ref|NP_247028.1| - 1.4 9.2 6.8 2 8.7 0.3 2.5 2 1 1 3 3 2 0 Spectrin repeat KxDL PF10241.4 gi|15668235|ref|NP_247028.1| - 1.5 8.7 6.9 1.6 8.7 0.5 2.9 1 1 2 3 3 3 0 Uncharacterized conserved protein UXS1_N PF11803.3 gi|15668235|ref|NP_247028.1| - 1.7 8.4 6.5 5.4 6.8 0.1 3.0 3 1 0 3 3 2 0 UDP-glucuronate decarboxylase N-terminal IFT20 PF14931.1 gi|15668235|ref|NP_247028.1| - 1.7 8.5 9.6 7.3 6.5 3.6 2.9 1 1 1 2 2 2 0 Intraflagellar transport complex B, subunit 20 DUF4200 PF13863.1 gi|15668235|ref|NP_247028.1| - 2 8.3 11.6 4.1 7.3 1.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Prefoldin_2 PF01920.15 gi|15668235|ref|NP_247028.1| - 2.2 8.1 16.6 0.26 11.0 0.4 3.9 1 1 1 3 3 3 0 Prefoldin subunit Vps51 PF08700.6 gi|15668235|ref|NP_247028.1| - 2.3 8.1 15.6 1.5 8.7 2.6 3.2 2 1 1 3 3 3 0 Vps51/Vps67 WEMBL PF05701.6 gi|15668235|ref|NP_247028.1| - 2.4 6.5 15.0 0.87 7.9 7.8 1.7 1 1 0 1 1 1 0 Weak chloroplast movement under blue light Atg14 PF10186.4 gi|15668235|ref|NP_247028.1| - 2.5 6.9 10.0 5.8 5.7 6.9 1.6 1 1 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 ISG65-75 PF11727.3 gi|15668235|ref|NP_247028.1| - 2.6 7.0 7.0 2.8 6.8 3.9 1.7 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF2203 PF09969.4 gi|15668235|ref|NP_247028.1| - 2.8 8.1 5.9 53 4.0 4.1 2.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF2935 PF11155.3 gi|15668235|ref|NP_247028.1| - 3.1 7.8 9.3 26 4.9 3.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) MutS_IV PF05190.13 gi|15668235|ref|NP_247028.1| - 3.1 8.0 10.3 6.5 7.0 4.3 3.1 1 1 3 4 4 4 0 MutS family domain IV Syntaxin PF00804.20 gi|15668235|ref|NP_247028.1| - 3.2 7.9 16.5 1.5 9.0 5.7 2.5 1 1 2 3 3 3 0 Syntaxin FemAB PF02388.11 gi|15668235|ref|NP_247028.1| - 3.3 6.3 8.2 2.8 6.5 2.1 2.0 1 1 1 2 2 2 0 FemAB family Seryl_tRNA_N PF02403.17 gi|15668235|ref|NP_247028.1| - 3.3 7.7 18.2 9.6 6.2 1.0 3.1 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Cauli_AT PF03233.8 gi|15668235|ref|NP_247028.1| - 3.3 7.4 18.7 4.9 6.8 1.4 3.1 1 1 2 3 3 3 0 Aphid transmission protein Syntaxin_2 PF14523.1 gi|15668235|ref|NP_247028.1| - 3.5 7.7 18.8 3.5 7.6 0.5 3.0 1 1 1 2 2 2 0 Syntaxin-like protein DUF641 PF04859.7 gi|15668235|ref|NP_247028.1| - 3.5 7.3 8.0 1.1 9.0 1.3 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Med28 PF11594.3 gi|15668235|ref|NP_247028.1| - 3.8 7.8 11.6 4.7 7.4 3.4 2.4 1 1 1 2 2 2 0 Mediator complex subunit 28 DUF972 PF06156.8 gi|15668235|ref|NP_247028.1| - 3.8 7.8 14.5 1.7e+02 2.5 0.2 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF972) LXG PF04740.7 gi|15668235|ref|NP_247028.1| - 4.9 6.8 17.4 6.6 6.4 1.8 2.2 1 1 1 2 2 2 0 LXG domain of WXG superfamily Uds1 PF15456.1 gi|15668235|ref|NP_247028.1| - 6.3 6.8 11.8 10 6.1 6.0 2.4 2 1 0 2 2 2 0 Up-regulated During Septation DUF16 PF01519.11 gi|15668235|ref|NP_247028.1| - 6.8 6.9 8.9 8.5 6.6 3.6 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF1366 PF07104.6 gi|15668235|ref|NP_247028.1| - 8.4 6.0 15.2 6.4 6.4 5.2 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1366) DUF2117 PF09890.4 gi|15668236|ref|NP_247029.1| - 1.4e-82 276.0 13.6 1.4e-82 276.0 9.4 1.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2117) PAPS_reduct PF01507.14 gi|15668237|ref|NP_247030.1| - 1.9e-52 177.6 0.1 1.2e-51 174.9 0.0 2.0 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.15 gi|15668237|ref|NP_247030.1| - 1.3e-17 63.3 2.8 3.1e-17 62.0 1.9 1.7 1 0 0 1 1 1 1 PUA domain ATP_bind_3 PF01171.15 gi|15668237|ref|NP_247030.1| - 0.0017 17.9 0.0 0.0027 17.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family QueC PF06508.8 gi|15668237|ref|NP_247030.1| - 0.034 13.4 0.0 0.072 12.3 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC FUN14 PF04930.10 gi|15668238|ref|NP_247031.1| - 9.8e-18 64.2 8.7 1.2e-17 64.0 6.1 1.1 1 0 0 1 1 1 1 FUN14 family SPC12 PF06645.8 gi|15668238|ref|NP_247031.1| - 0.83 9.4 4.5 0.93 9.3 1.0 2.1 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) ATPase_gene1 PF09527.5 gi|15668238|ref|NP_247031.1| - 4.2 7.2 11.6 3.1 7.6 0.5 2.7 2 1 0 2 2 2 0 Putative F0F1-ATPase subunit (ATPase_gene1) DUF555 PF04475.7 gi|15668239|ref|NP_247032.1| - 3e-48 162.0 0.5 3.4e-48 161.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF555) AA_kinase PF00696.23 gi|15668240|ref|NP_247033.1| - 2.7e-46 158.0 3.5 3.1e-46 157.8 2.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family DUF1395 PF07160.7 gi|15668241|ref|NP_247034.1| - 0.0071 15.8 3.2 0.0086 15.6 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1395) DivIC PF04977.10 gi|15668241|ref|NP_247034.1| - 0.029 13.8 4.1 0.029 13.8 2.8 1.7 2 0 0 2 2 2 0 Septum formation initiator NDK PF00334.14 gi|15668241|ref|NP_247034.1| - 0.05 13.3 0.2 0.064 13.0 0.1 1.2 1 0 0 1 1 1 0 Nucleoside diphosphate kinase DUF3584 PF12128.3 gi|15668241|ref|NP_247034.1| - 0.054 10.8 2.3 0.058 10.7 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) IncA PF04156.9 gi|15668241|ref|NP_247034.1| - 0.078 12.5 9.9 0.086 12.4 6.8 1.1 1 0 0 1 1 1 0 IncA protein DUF3856 PF12968.2 gi|15668241|ref|NP_247034.1| - 0.12 12.2 0.2 0.18 11.6 0.1 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) DUF695 PF05117.7 gi|15668241|ref|NP_247034.1| - 0.13 12.1 1.3 0.15 11.9 0.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF695) DUF3508 PF12018.3 gi|15668241|ref|NP_247034.1| - 0.15 10.9 1.4 0.62 9.0 1.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3508) DUF1664 PF07889.7 gi|15668241|ref|NP_247034.1| - 0.18 11.6 3.4 0.32 10.8 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1359 PF07097.6 gi|15668241|ref|NP_247034.1| - 0.21 11.6 3.2 0.3 11.1 1.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1359) DUF3713 PF12506.3 gi|15668241|ref|NP_247034.1| - 0.22 11.6 1.7 0.38 10.8 1.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3713) Syntaxin PF00804.20 gi|15668241|ref|NP_247034.1| - 0.26 11.4 8.2 4.4 7.5 5.7 2.1 1 1 0 1 1 1 0 Syntaxin Striatin PF08232.7 gi|15668241|ref|NP_247034.1| - 0.29 11.4 3.9 0.36 11.1 2.7 1.2 1 0 0 1 1 1 0 Striatin family CENP-H PF05837.7 gi|15668241|ref|NP_247034.1| - 0.33 11.1 5.0 0.42 10.8 3.5 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF972 PF06156.8 gi|15668241|ref|NP_247034.1| - 0.34 11.2 4.6 0.43 10.9 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF972) Snapin_Pallidin PF14712.1 gi|15668241|ref|NP_247034.1| - 0.37 11.1 3.4 0.46 10.8 2.4 1.2 1 0 0 1 1 1 0 Snapin/Pallidin Fib_alpha PF08702.5 gi|15668241|ref|NP_247034.1| - 0.39 10.8 4.0 0.69 10.0 2.8 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF342 PF03961.8 gi|15668241|ref|NP_247034.1| - 0.43 8.9 7.7 0.43 8.9 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) Cas_DxTHG PF09455.5 gi|15668241|ref|NP_247034.1| - 0.44 9.6 6.0 0.51 9.4 4.1 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family Vps51 PF08700.6 gi|15668241|ref|NP_247034.1| - 0.48 10.2 3.2 0.25 11.2 0.6 1.7 2 0 0 2 2 2 0 Vps51/Vps67 HSCB_C PF07743.8 gi|15668241|ref|NP_247034.1| - 0.51 10.8 9.3 2.5 8.6 4.5 2.0 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain CDC37_N PF03234.9 gi|15668241|ref|NP_247034.1| - 0.71 10.1 5.0 1.1 9.6 3.4 1.3 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding RICH PF05062.7 gi|15668241|ref|NP_247034.1| - 0.76 9.9 8.0 1.2 9.3 0.1 2.1 2 0 0 2 2 2 0 RICH domain THOC7 PF05615.8 gi|15668241|ref|NP_247034.1| - 0.87 9.8 6.9 1.4 9.1 4.8 1.4 1 1 0 1 1 1 0 Tho complex subunit 7 Lipoprotein_7 PF01540.11 gi|15668241|ref|NP_247034.1| - 0.93 8.4 7.3 1.1 8.1 5.1 1.1 1 0 0 1 1 1 0 Adhesin lipoprotein DUF3829 PF12889.2 gi|15668241|ref|NP_247034.1| - 1.1 8.3 6.0 1.8 7.7 4.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) APG6 PF04111.7 gi|15668241|ref|NP_247034.1| - 1.3 8.0 8.2 1.4 7.9 5.7 1.1 1 0 0 1 1 1 0 Autophagy protein Apg6 Ribosomal_L29 PF00831.18 gi|15668241|ref|NP_247034.1| - 1.3 8.7 0.1 1.3 8.7 0.0 2.8 2 2 1 3 3 3 0 Ribosomal L29 protein Seryl_tRNA_N PF02403.17 gi|15668241|ref|NP_247034.1| - 1.3 9.0 9.3 2.6 8.1 6.5 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain G-gamma PF00631.17 gi|15668241|ref|NP_247034.1| - 1.4 8.7 3.4 5.8 6.7 0.0 2.4 2 1 0 2 2 2 0 GGL domain Spc24 PF08286.6 gi|15668241|ref|NP_247034.1| - 1.4 8.6 6.3 2 8.1 4.4 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Matrilin_ccoil PF10393.4 gi|15668241|ref|NP_247034.1| - 1.7 8.0 4.7 0.99 8.8 1.7 1.8 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin GerPC PF10737.4 gi|15668241|ref|NP_247034.1| - 2.5 7.8 7.4 3 7.5 1.7 2.0 1 1 1 2 2 2 0 Spore germination protein GerPC FlaC_arch PF05377.6 gi|15668241|ref|NP_247034.1| - 3.1 7.7 11.2 0.61 10.0 2.9 2.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4404 PF14357.1 gi|15668241|ref|NP_247034.1| - 4.4 7.8 8.6 11 6.4 4.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) ACCA PF03255.9 gi|15668241|ref|NP_247034.1| - 5.3 6.5 6.7 2.2 7.8 2.4 1.7 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XhlA PF10779.4 gi|15668241|ref|NP_247034.1| - 8.4 6.3 12.0 31 4.5 8.3 1.9 1 1 0 1 1 1 0 Haemolysin XhlA Plasmid_stabil PF05016.9 gi|15668242|ref|NP_247035.1| - 2.6e-09 37.3 1.3 3e-09 37.1 0.9 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Gp49 PF05973.9 gi|15668242|ref|NP_247035.1| - 0.00054 19.9 0.1 0.00067 19.6 0.1 1.1 1 0 0 1 1 1 1 Phage derived protein Gp49-like (DUF891) PYRIN PF02758.11 gi|15668242|ref|NP_247035.1| - 0.044 13.4 0.8 0.068 12.8 0.6 1.3 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain SPOR PF05036.8 gi|15668242|ref|NP_247035.1| - 0.1 12.7 0.0 0.17 12.0 0.0 1.4 1 1 0 1 1 1 0 Sporulation related domain Hydrolase_6 PF13344.1 gi|15668243|ref|NP_247036.1| - 0.017 14.9 0.0 0.019 14.8 0.0 1.0 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|15668244|ref|NP_247037.1| - 0.00075 19.1 0.2 0.00081 19.0 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase STN PF07660.9 gi|15668244|ref|NP_247037.1| - 0.021 14.3 0.8 0.045 13.3 0.0 1.9 2 0 0 2 2 2 0 Secretin and TonB N terminus short domain RHSP PF07999.6 gi|15668244|ref|NP_247037.1| - 0.12 10.9 0.0 0.14 10.7 0.0 1.1 1 0 0 1 1 1 0 Retrotransposon hot spot protein Arch_ATPase PF01637.13 gi|15668245|ref|NP_247038.1| - 5.6e-90 301.1 7.2 5.6e-90 301.1 5.0 1.5 2 0 0 2 2 2 1 Archaeal ATPase AAA_14 PF13173.1 gi|15668245|ref|NP_247038.1| - 4.4e-08 33.0 10.5 3.4e-05 23.7 0.1 3.3 1 1 2 3 3 3 2 AAA domain RNA12 PF10443.4 gi|15668245|ref|NP_247038.1| - 3.6e-07 29.0 0.0 0.00066 18.2 0.1 2.1 2 0 0 2 2 2 2 RNA12 protein AAA_22 PF13401.1 gi|15668245|ref|NP_247038.1| - 2e-06 27.9 0.0 9.2e-06 25.8 0.0 2.1 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|15668245|ref|NP_247038.1| - 3.2e-06 27.2 0.0 9.1e-06 25.7 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|15668245|ref|NP_247038.1| - 3.4e-05 24.0 0.1 0.0013 18.9 0.0 2.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.9 gi|15668245|ref|NP_247038.1| - 0.0043 16.7 0.0 0.018 14.7 0.0 2.1 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_10 PF12846.2 gi|15668245|ref|NP_247038.1| - 0.018 14.4 0.0 0.23 10.8 0.0 2.3 1 1 1 2 2 2 0 AAA-like domain NB-ARC PF00931.17 gi|15668245|ref|NP_247038.1| - 0.019 13.8 0.0 2.4 6.9 0.0 2.6 3 0 0 3 3 3 0 NB-ARC domain MMR_HSR1 PF01926.18 gi|15668245|ref|NP_247038.1| - 0.02 14.8 0.9 0.02 14.8 0.6 2.2 2 2 0 2 2 2 0 50S ribosome-binding GTPase cobW PF02492.14 gi|15668245|ref|NP_247038.1| - 0.03 13.7 0.0 0.086 12.2 0.0 1.8 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.7 gi|15668245|ref|NP_247038.1| - 0.031 13.9 0.0 0.061 12.9 0.0 1.7 1 1 0 1 1 1 0 NACHT domain AAA_17 PF13207.1 gi|15668245|ref|NP_247038.1| - 0.036 14.9 3.1 0.87 10.4 2.1 2.6 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|15668245|ref|NP_247038.1| - 0.056 13.6 0.1 0.68 10.1 0.0 2.6 1 1 2 3 3 3 0 RNA helicase Zot PF05707.7 gi|15668245|ref|NP_247038.1| - 0.063 12.7 0.0 0.2 11.0 0.0 1.9 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) Nit_Regul_Hom PF10126.4 gi|15668245|ref|NP_247038.1| - 0.065 13.0 0.9 0.57 9.9 0.0 2.8 2 1 1 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Viral_helicase1 PF01443.13 gi|15668245|ref|NP_247038.1| - 0.13 11.8 0.3 1.4 8.3 0.0 2.5 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase Arch_ATPase PF01637.13 gi|15668246|ref|NP_247039.1| - 4.2e-78 262.2 6.7 4.2e-78 262.2 4.6 2.0 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|15668246|ref|NP_247039.1| - 3.8e-09 36.7 0.1 6.3e-08 32.8 0.0 2.8 1 1 2 3 3 3 1 AAA domain AAA_14 PF13173.1 gi|15668246|ref|NP_247039.1| - 8.7e-08 32.1 8.7 2.8e-05 24.0 0.2 3.1 2 1 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15668246|ref|NP_247039.1| - 1.2e-07 31.8 0.0 7.1e-07 29.3 0.0 2.2 2 1 1 3 3 3 1 AAA ATPase domain RNA12 PF10443.4 gi|15668246|ref|NP_247039.1| - 3.6e-06 25.7 0.0 0.044 12.2 0.0 3.0 2 1 0 2 2 2 2 RNA12 protein AAA PF00004.24 gi|15668246|ref|NP_247039.1| - 7e-05 23.0 0.3 0.007 16.5 0.0 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.9 gi|15668246|ref|NP_247039.1| - 0.00039 20.1 0.1 0.0029 17.3 0.0 2.4 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B TK PF00265.13 gi|15668246|ref|NP_247039.1| - 0.00041 19.9 0.1 0.0016 18.0 0.0 2.0 2 0 0 2 2 2 1 Thymidine kinase NB-ARC PF00931.17 gi|15668246|ref|NP_247039.1| - 0.0016 17.3 1.3 0.0089 14.9 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain Zot PF05707.7 gi|15668246|ref|NP_247039.1| - 0.0016 17.9 0.0 0.029 13.8 0.0 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) Bac_DnaA PF00308.13 gi|15668246|ref|NP_247039.1| - 0.0019 17.9 1.3 0.0019 17.9 0.9 3.1 2 1 1 3 3 3 1 Bacterial dnaA protein AAA_10 PF12846.2 gi|15668246|ref|NP_247039.1| - 0.0035 16.8 0.4 0.82 9.0 0.0 2.7 2 1 0 3 3 3 1 AAA-like domain AAA_25 PF13481.1 gi|15668246|ref|NP_247039.1| - 0.0048 16.3 0.0 2.5 7.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|15668246|ref|NP_247039.1| - 0.012 16.4 0.1 0.012 16.4 0.0 2.9 1 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|15668246|ref|NP_247039.1| - 0.017 15.3 0.0 0.065 13.4 0.0 2.1 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.1 gi|15668246|ref|NP_247039.1| - 0.023 15.0 6.1 0.037 14.3 0.0 2.7 1 1 2 3 3 3 0 AAA domain AAA_35 PF14516.1 gi|15668246|ref|NP_247039.1| - 0.026 13.1 0.0 0.11 11.1 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain AAA_11 PF13086.1 gi|15668246|ref|NP_247039.1| - 0.05 13.1 0.0 0.1 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|15668246|ref|NP_247039.1| - 0.059 13.0 0.0 0.29 10.8 0.0 2.1 2 0 0 2 2 2 0 NTPase cobW PF02492.14 gi|15668246|ref|NP_247039.1| - 0.065 12.6 0.0 0.37 10.1 0.0 2.2 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.4 gi|15668246|ref|NP_247039.1| - 0.07 12.0 0.0 0.12 11.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.7 gi|15668246|ref|NP_247039.1| - 0.09 12.4 0.0 0.43 10.2 0.0 2.1 2 0 0 2 2 2 0 NACHT domain VWA_2 PF13519.1 gi|15668247|ref|NP_247040.1| - 1.5e-06 28.4 0.0 4e-06 27.0 0.0 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.4 gi|15668247|ref|NP_247040.1| - 0.00017 21.6 0.0 0.00032 20.7 0.0 1.5 1 0 0 1 1 1 1 VWA-like domain (DUF2201) VWA_3 PF13768.1 gi|15668247|ref|NP_247040.1| - 0.00044 19.9 0.0 0.00073 19.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|15668247|ref|NP_247040.1| - 0.0021 17.2 0.0 0.0037 16.4 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.23 gi|15668247|ref|NP_247040.1| - 0.0046 16.6 0.0 0.011 15.4 0.0 1.6 1 1 0 1 1 1 1 von Willebrand factor type A domain Radical_SAM PF04055.16 gi|15668247|ref|NP_247040.1| - 0.065 13.4 0.6 0.28 11.3 0.0 2.2 2 1 1 3 3 3 0 Radical SAM superfamily DUF4175 PF13779.1 gi|15668247|ref|NP_247040.1| - 0.28 8.8 0.0 0.36 8.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) HEAT_2 PF13646.1 gi|15668249|ref|NP_247042.1| - 0.0017 18.6 0.0 0.0082 16.4 0.0 2.1 1 1 1 2 2 2 1 HEAT repeats RE_R_Pab1 PF09522.5 gi|15668249|ref|NP_247042.1| - 0.01 15.7 1.7 2.1 8.3 0.1 2.8 2 1 0 2 2 2 0 R.Pab1 restriction endonuclease HEAT PF02985.17 gi|15668249|ref|NP_247042.1| - 0.013 15.5 0.0 0.039 14.0 0.0 1.8 1 0 0 1 1 1 0 HEAT repeat Arm PF00514.18 gi|15668249|ref|NP_247042.1| - 0.15 11.9 0.0 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat DUF217 PF02697.9 gi|15668249|ref|NP_247042.1| - 0.66 10.2 11.0 1.5 9.1 0.2 3.1 2 2 1 3 3 3 0 Uncharacterized ACR, COG1753 AAA_5 PF07728.9 gi|15668250|ref|NP_247043.1| - 2.1e-26 92.3 0.0 4.1e-26 91.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|15668250|ref|NP_247043.1| - 0.00015 20.7 0.1 0.027 13.2 0.0 3.1 3 0 0 3 3 3 1 MCM2/3/5 family DUF258 PF03193.11 gi|15668250|ref|NP_247043.1| - 0.00063 18.9 0.0 0.0012 18.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_3 PF07726.6 gi|15668250|ref|NP_247043.1| - 0.00091 18.8 0.0 0.0016 18.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 gi|15668250|ref|NP_247043.1| - 0.0011 19.1 0.0 0.0011 19.1 0.0 2.3 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.13 gi|15668250|ref|NP_247043.1| - 0.0069 15.9 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.1 gi|15668250|ref|NP_247043.1| - 0.088 12.7 0.0 0.28 11.1 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain ARS2 PF04959.8 gi|15668250|ref|NP_247043.1| - 1.2 9.3 5.4 7.3 6.7 0.8 3.0 3 1 0 3 3 3 0 Arsenite-resistance protein 2 AAA_17 PF13207.1 gi|15668250|ref|NP_247043.1| - 2.4 8.9 6.9 4.7e+02 1.6 4.8 3.2 1 1 0 1 1 1 0 AAA domain RHH_1 PF01402.16 gi|15668251|ref|NP_247044.1| - 2e-10 40.1 1.8 4.2e-10 39.0 1.3 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family NikR_C PF08753.6 gi|15668251|ref|NP_247044.1| - 2.4e-06 27.3 0.1 3.4e-06 26.8 0.1 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_3 PF12651.2 gi|15668251|ref|NP_247044.1| - 1.5e-05 24.5 3.1 3.7e-05 23.3 2.2 1.7 1 0 0 1 1 1 1 Ribbon-helix-helix domain DUF956 PF06115.6 gi|15668251|ref|NP_247044.1| - 0.15 11.6 1.0 1.6 8.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF956) DUF3211 PF11485.3 gi|15668251|ref|NP_247044.1| - 0.36 10.8 8.6 0.99 9.4 0.9 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3211) Pox_VLTF3 PF04947.9 gi|15668251|ref|NP_247044.1| - 0.82 9.1 4.4 1.3 8.5 2.9 1.5 1 1 1 2 2 2 0 Poxvirus Late Transcription Factor VLTF3 like MCR_beta PF02241.13 gi|15668252|ref|NP_247045.1| - 6.3e-157 520.4 5.0 8.2e-157 520.0 3.4 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|15668252|ref|NP_247045.1| - 1.5e-95 317.8 0.5 2.3e-95 317.2 0.3 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain DUF4147 PF13660.1 gi|15668252|ref|NP_247045.1| - 0.0054 15.8 0.1 0.013 14.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MCR_gamma PF02240.11 gi|15668253|ref|NP_247046.1| - 5.1e-145 481.0 0.6 5.9e-145 480.8 0.4 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_alpha_N PF02745.10 gi|15668254|ref|NP_247047.1| - 2e-165 548.5 0.1 2.6e-165 548.1 0.1 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|15668254|ref|NP_247047.1| - 1.1e-66 222.6 1.9 6.6e-66 220.0 1.6 2.0 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Lipoprotein_3 PF00938.12 gi|15668254|ref|NP_247047.1| - 0.024 14.4 0.1 0.043 13.5 0.0 1.4 1 0 0 1 1 1 0 Lipoprotein MCR_beta_N PF02783.10 gi|15668254|ref|NP_247047.1| - 0.032 13.6 0.0 0.058 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain CbiA PF01656.18 gi|15668255|ref|NP_247048.1| - 4e-25 88.3 0.3 5.4e-25 87.9 0.2 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15668255|ref|NP_247048.1| - 4.5e-09 36.4 0.0 3.4e-08 33.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|15668255|ref|NP_247048.1| - 7e-06 25.3 0.6 0.00013 21.1 0.0 2.6 2 1 0 2 2 2 1 Anion-transporting ATPase AAA_17 PF13207.1 gi|15668255|ref|NP_247048.1| - 3.9e-05 24.4 1.4 8.7e-05 23.3 1.0 1.9 1 1 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|15668255|ref|NP_247048.1| - 7e-05 22.1 1.9 0.00052 19.2 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.15 gi|15668255|ref|NP_247048.1| - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase Zeta_toxin PF06414.7 gi|15668255|ref|NP_247048.1| - 0.00091 18.3 0.2 0.0039 16.3 0.0 2.0 2 0 0 2 2 2 1 Zeta toxin TrkA_N PF02254.13 gi|15668255|ref|NP_247048.1| - 0.0012 18.8 1.0 0.19 11.7 0.0 3.2 2 1 2 4 4 4 1 TrkA-N domain YhjQ PF06564.7 gi|15668255|ref|NP_247048.1| - 0.0014 18.0 0.0 0.023 14.0 0.0 2.0 2 0 0 2 2 2 1 YhjQ protein AAA_18 PF13238.1 gi|15668255|ref|NP_247048.1| - 0.0033 17.7 6.8 0.011 16.1 2.5 2.6 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.5 gi|15668255|ref|NP_247048.1| - 0.0053 15.9 0.1 0.024 13.8 0.0 2.0 2 0 0 2 2 2 1 Chromatin associated protein KTI12 MipZ PF09140.6 gi|15668255|ref|NP_247048.1| - 0.007 15.4 0.0 0.022 13.8 0.0 1.7 2 0 0 2 2 2 1 ATPase MipZ AAA_25 PF13481.1 gi|15668255|ref|NP_247048.1| - 0.0092 15.3 0.0 0.035 13.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.12 gi|15668255|ref|NP_247048.1| - 0.0098 15.7 4.0 0.012 15.4 0.2 2.5 2 1 0 3 3 3 1 Domain of unknown function DUF87 RNA_helicase PF00910.17 gi|15668255|ref|NP_247048.1| - 0.01 15.9 0.0 0.038 14.1 0.1 1.9 2 0 0 2 2 2 0 RNA helicase Miro PF08477.8 gi|15668255|ref|NP_247048.1| - 0.011 16.2 0.5 0.037 14.5 0.2 2.1 2 1 0 2 2 2 0 Miro-like protein ABC_tran PF00005.22 gi|15668255|ref|NP_247048.1| - 0.011 15.9 0.7 0.021 15.1 0.1 1.9 2 1 0 2 2 2 0 ABC transporter PRK PF00485.13 gi|15668255|ref|NP_247048.1| - 0.012 15.1 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family SRP54 PF00448.17 gi|15668255|ref|NP_247048.1| - 0.015 14.7 0.1 0.35 10.2 0.1 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_16 PF13191.1 gi|15668255|ref|NP_247048.1| - 0.015 15.2 0.0 0.033 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain ArgK PF03308.11 gi|15668255|ref|NP_247048.1| - 0.016 14.0 0.0 0.03 13.0 0.0 1.5 1 0 0 1 1 1 0 ArgK protein AAA_10 PF12846.2 gi|15668255|ref|NP_247048.1| - 0.028 13.8 0.2 0.064 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA-like domain LpxK PF02606.9 gi|15668255|ref|NP_247048.1| - 0.031 13.2 0.0 2.4 7.0 0.0 2.1 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase Rad17 PF03215.10 gi|15668255|ref|NP_247048.1| - 0.038 12.6 0.1 0.065 11.9 0.0 1.3 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein TrwB_AAD_bind PF10412.4 gi|15668255|ref|NP_247048.1| - 0.04 12.5 0.1 0.6 8.6 0.1 2.0 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Methyltransf_31 PF13847.1 gi|15668255|ref|NP_247048.1| - 0.072 12.6 1.2 3.9 7.0 0.0 2.6 2 1 0 2 2 2 0 Methyltransferase domain MobB PF03205.9 gi|15668255|ref|NP_247048.1| - 0.1 12.3 2.8 0.43 10.2 0.5 2.7 2 2 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B GTP_EFTU PF00009.22 gi|15668255|ref|NP_247048.1| - 0.24 10.8 1.7 0.71 9.2 1.2 1.9 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Peripla_BP_2 PF01497.13 gi|15668256|ref|NP_247049.1| - 2.5e-30 105.3 0.0 3.7e-30 104.8 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Methyltransf_2 PF00891.13 gi|15668257|ref|NP_247050.1| - 3.7e-11 42.6 0.0 5.9e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_18 PF12847.2 gi|15668257|ref|NP_247050.1| - 4e-06 27.3 0.0 1.7e-05 25.3 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.14 gi|15668257|ref|NP_247050.1| - 0.0016 18.0 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|15668257|ref|NP_247050.1| - 0.039 14.4 0.0 0.16 12.4 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|15668257|ref|NP_247050.1| - 0.061 12.7 0.0 0.098 12.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain PASTA PF03793.14 gi|15668257|ref|NP_247050.1| - 0.078 12.6 0.0 3.7 7.2 0.0 2.5 2 0 0 2 2 2 0 PASTA domain Dimerisation PF08100.6 gi|15668257|ref|NP_247050.1| - 0.15 11.8 0.9 0.33 10.8 0.0 2.0 2 0 0 2 2 2 0 Dimerisation domain FecCD PF01032.13 gi|15668258|ref|NP_247051.1| - 1.8e-98 329.2 34.0 2.1e-98 329.0 23.6 1.0 1 0 0 1 1 1 1 FecCD transport family Imm29 PF15575.1 gi|15668259|ref|NP_247052.1| - 0.011 15.3 0.2 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 29 FAINT PF04385.10 gi|15668259|ref|NP_247052.1| - 0.45 10.3 4.0 1.2 9.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function, DUF529 ABC_tran PF00005.22 gi|15668260|ref|NP_247053.1| - 1.1e-34 119.7 0.0 1.4e-34 119.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15668260|ref|NP_247053.1| - 5.8e-09 36.3 5.8 0.00082 19.4 0.5 2.2 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|15668260|ref|NP_247053.1| - 4.8e-05 22.6 3.3 0.00023 20.4 2.3 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|15668260|ref|NP_247053.1| - 5.5e-05 22.6 0.0 0.00011 21.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_14 PF13173.1 gi|15668260|ref|NP_247053.1| - 0.00017 21.5 0.9 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|15668260|ref|NP_247053.1| - 0.00027 20.1 11.7 0.018 14.0 2.7 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|15668260|ref|NP_247053.1| - 0.00041 20.7 0.5 0.0006 20.1 0.3 1.4 1 1 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|15668260|ref|NP_247053.1| - 0.00054 18.8 0.0 0.00087 18.1 0.0 1.2 1 0 0 1 1 1 1 ArgK protein AAA_16 PF13191.1 gi|15668260|ref|NP_247053.1| - 0.0014 18.6 0.0 0.0059 16.6 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain DUF258 PF03193.11 gi|15668260|ref|NP_247053.1| - 0.0045 16.1 0.0 0.0071 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 ABC_ATPase PF09818.4 gi|15668260|ref|NP_247053.1| - 0.0067 15.0 0.5 0.43 9.1 0.0 2.7 2 1 0 2 2 2 1 Predicted ATPase of the ABC class SbcCD_C PF13558.1 gi|15668260|ref|NP_247053.1| - 0.011 15.6 0.0 0.099 12.5 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.1 gi|15668260|ref|NP_247053.1| - 0.014 15.5 4.4 0.18 11.9 3.1 2.2 1 1 0 1 1 1 0 AAA domain Arch_ATPase PF01637.13 gi|15668260|ref|NP_247053.1| - 0.034 13.8 0.6 0.045 13.4 0.4 1.5 1 1 0 1 1 1 0 Archaeal ATPase MutS_V PF00488.16 gi|15668260|ref|NP_247053.1| - 0.039 13.3 0.0 0.092 12.1 0.0 1.6 2 0 0 2 2 2 0 MutS domain V AAA_18 PF13238.1 gi|15668260|ref|NP_247053.1| - 0.054 13.8 4.2 2.3 8.5 2.9 2.2 1 1 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|15668260|ref|NP_247053.1| - 0.06 12.9 0.1 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 NB-ARC PF00931.17 gi|15668260|ref|NP_247053.1| - 0.067 12.0 2.3 0.13 11.1 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_30 PF13604.1 gi|15668260|ref|NP_247053.1| - 0.084 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|15668260|ref|NP_247053.1| - 0.092 12.5 0.0 0.21 11.3 0.0 1.6 2 0 0 2 2 1 0 Part of AAA domain AAA_10 PF12846.2 gi|15668260|ref|NP_247053.1| - 0.094 12.1 0.3 0.21 10.9 0.1 1.6 1 1 0 1 1 1 0 AAA-like domain DUF87 PF01935.12 gi|15668260|ref|NP_247053.1| - 0.097 12.4 1.0 0.13 12.0 0.7 1.5 1 1 0 1 1 1 0 Domain of unknown function DUF87 Zeta_toxin PF06414.7 gi|15668260|ref|NP_247053.1| - 0.11 11.5 0.0 0.17 10.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.7 gi|15668260|ref|NP_247053.1| - 0.12 12.0 0.1 0.32 10.6 0.0 1.8 2 0 0 2 2 2 0 NACHT domain Peptidase_U32 PF01136.14 gi|15668261|ref|NP_247054.1| - 2.4e-80 268.8 0.2 3.3e-80 268.3 0.1 1.2 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.20 gi|15668261|ref|NP_247054.1| - 0.0022 18.0 1.6 0.0071 16.4 1.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|15668261|ref|NP_247054.1| - 0.033 13.8 1.6 0.13 11.8 0.5 2.4 2 0 0 2 2 2 0 Elongation factor Tu domain 4 Radical_SAM PF04055.16 gi|15668261|ref|NP_247054.1| - 0.053 13.6 0.0 0.18 11.9 0.0 1.9 1 0 0 1 1 1 0 Radical SAM superfamily Na_Ca_ex PF01699.19 gi|15668262|ref|NP_247055.1| - 2.8e-50 169.5 32.0 2.3e-26 92.0 9.1 2.4 2 1 0 2 2 2 2 Sodium/calcium exchanger protein CCG PF02754.11 gi|15668263|ref|NP_247056.1| - 6.8e-42 141.3 1.4 4.9e-21 74.5 0.4 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer2_3 PF13085.1 gi|15668263|ref|NP_247056.1| - 1.3e-27 95.7 0.3 3.9e-27 94.2 0.0 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 gi|15668263|ref|NP_247056.1| - 2.4e-11 43.4 4.7 2.4e-11 43.4 3.3 3.0 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668263|ref|NP_247056.1| - 1.4e-09 37.5 6.1 1.4e-09 37.5 4.2 2.8 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668263|ref|NP_247056.1| - 4.3e-09 36.5 4.4 4.3e-09 36.5 3.1 3.0 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668263|ref|NP_247056.1| - 9.7e-07 29.0 6.3 9.7e-07 29.0 4.4 3.2 4 1 0 4 4 3 1 4Fe-4S dicluster domain Fer2 PF00111.22 gi|15668263|ref|NP_247056.1| - 1.1e-06 28.2 0.2 1.1e-06 28.2 0.1 2.7 3 0 0 3 3 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_18 PF13746.1 gi|15668263|ref|NP_247056.1| - 1.2e-06 28.8 13.4 0.0008 19.7 0.2 4.1 5 0 0 5 5 4 2 4Fe-4S dicluster domain Fer2_4 PF13510.1 gi|15668263|ref|NP_247056.1| - 1.2e-06 28.2 0.0 5.9e-06 25.9 0.0 2.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.1 gi|15668263|ref|NP_247056.1| - 2.8e-06 27.4 9.3 2.8e-06 27.4 6.5 3.9 4 1 1 5 5 5 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668263|ref|NP_247056.1| - 0.01 15.7 1.6 0.01 15.7 1.1 4.9 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668263|ref|NP_247056.1| - 0.015 15.9 16.2 0.016 15.9 7.6 3.4 3 1 1 4 4 3 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|15668263|ref|NP_247056.1| - 0.016 15.0 2.8 0.016 15.0 1.9 4.2 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15668263|ref|NP_247056.1| - 0.034 14.4 1.6 0.034 14.4 1.1 4.6 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668263|ref|NP_247056.1| - 0.043 14.3 4.6 0.43 11.1 0.1 3.2 3 0 0 3 3 2 0 4Fe-4S single cluster domain LAGLIDADG_3 PF14528.1 gi|15668264|ref|NP_247057.1| - 0.00073 19.7 0.9 0.0014 18.8 0.4 1.6 1 1 1 2 2 2 1 LAGLIDADG-like domain KH_1 PF00013.24 gi|15668264|ref|NP_247057.1| - 0.27 10.9 0.1 0.27 10.9 0.1 2.4 2 1 0 2 2 2 0 KH domain MCR_C PF04609.7 gi|15668265|ref|NP_247058.1| - 1.2e-120 401.3 2.8 1.4e-120 401.0 1.9 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C tRNA_anti-like PF12869.2 gi|15668265|ref|NP_247058.1| - 0.13 11.7 1.1 7.4 6.0 0.1 2.2 2 0 0 2 2 2 0 tRNA_anti-like DUF2209 PF09974.4 gi|15668266|ref|NP_247059.1| - 1.8e-56 189.6 5.6 2e-56 189.5 3.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) DUF1241 PF06840.6 gi|15668266|ref|NP_247059.1| - 0.081 12.1 0.9 0.11 11.7 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) TEX12 PF15219.1 gi|15668266|ref|NP_247059.1| - 0.12 12.3 0.3 0.22 11.5 0.2 1.4 1 1 0 1 1 1 0 Testis-expressed 12 DUF95 PF01944.12 gi|15668267|ref|NP_247060.1| - 6.5e-06 25.8 16.8 0.00028 20.5 11.7 2.8 1 1 0 1 1 1 1 Integral membrane protein DUF95 eIF-5_eIF-2B PF01873.12 gi|15668268|ref|NP_247061.1| - 1.8e-43 147.1 0.0 2.2e-43 146.8 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Ribosomal_L37e PF01907.14 gi|15668269|ref|NP_247062.1| - 1e-26 92.4 12.1 1.2e-26 92.2 8.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.2 gi|15668269|ref|NP_247062.1| - 0.0031 17.3 0.8 0.004 16.9 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon Stc1 PF12898.2 gi|15668269|ref|NP_247062.1| - 0.024 14.6 0.8 0.028 14.4 0.6 1.2 1 0 0 1 1 1 0 Stc1 domain HypA PF01155.14 gi|15668269|ref|NP_247062.1| - 0.085 12.5 0.9 0.097 12.3 0.7 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-CSL PF05207.8 gi|15668269|ref|NP_247062.1| - 0.12 11.8 1.4 0.17 11.3 1.0 1.4 1 1 0 1 1 1 0 CSL zinc finger Zn-ribbon_8 PF09723.5 gi|15668269|ref|NP_247062.1| - 0.15 12.0 1.6 13 5.8 0.2 2.1 2 0 0 2 2 2 0 Zinc ribbon domain YhfH PF14149.1 gi|15668269|ref|NP_247062.1| - 0.19 11.5 1.4 4.5 7.1 0.1 2.2 2 0 0 2 2 2 0 YhfH-like protein zf-Mss51 PF13824.1 gi|15668269|ref|NP_247062.1| - 0.21 11.4 1.9 3 7.7 0.1 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ribbon_3 PF13248.1 gi|15668269|ref|NP_247062.1| - 0.26 10.5 3.4 2.2 7.5 2.4 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S14 PF00253.16 gi|15668269|ref|NP_247062.1| - 0.44 9.9 13.1 2.1 7.7 4.2 2.2 1 1 1 2 2 2 0 Ribosomal protein S14p/S29e zinc_ribbon_6 PF14599.1 gi|15668269|ref|NP_247062.1| - 0.46 10.3 2.6 0.72 9.6 1.8 1.4 1 1 0 1 1 1 0 Zinc-ribbon zf-HIT PF04438.11 gi|15668269|ref|NP_247062.1| - 0.49 10.0 5.8 3.3 7.4 0.2 2.2 2 0 0 2 2 2 0 HIT zinc finger zf-LSD1 PF06943.7 gi|15668269|ref|NP_247062.1| - 0.96 9.1 5.1 5.6 6.6 0.5 2.3 2 0 0 2 2 2 0 LSD1 zinc finger DUF35_N PF12172.3 gi|15668269|ref|NP_247062.1| - 1.5 8.8 7.2 2.5 8.1 5.0 1.4 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_RNApol_7kD PF03604.8 gi|15668269|ref|NP_247062.1| - 7.1 6.1 12.1 7.9 6.0 3.7 2.3 1 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit NIL PF09383.5 gi|15668270|ref|NP_247063.1| - 7.4e-13 47.8 0.0 9.4e-13 47.5 0.0 1.1 1 0 0 1 1 1 1 NIL domain Fer4 PF00037.22 gi|15668270|ref|NP_247063.1| - 9.8e-13 47.1 17.5 3.7e-07 29.4 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668270|ref|NP_247063.1| - 2.4e-10 40.6 30.3 7.2e-09 35.8 10.9 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668270|ref|NP_247063.1| - 9.9e-09 34.9 14.2 1.5e-08 34.3 9.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668270|ref|NP_247063.1| - 1.1e-08 34.4 15.4 0.0002 21.0 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668270|ref|NP_247063.1| - 2.8e-08 33.4 27.4 6e-06 25.9 11.6 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668270|ref|NP_247063.1| - 9.5e-08 32.1 15.0 1.5e-05 25.1 11.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668270|ref|NP_247063.1| - 1.4e-06 27.8 17.3 2.8e-05 23.7 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668270|ref|NP_247063.1| - 5.1e-06 26.4 29.4 8.7e-05 22.4 11.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668270|ref|NP_247063.1| - 6.7e-06 25.9 8.7 8.9e-06 25.5 6.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668270|ref|NP_247063.1| - 1.1e-05 25.3 15.1 0.0085 16.3 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668270|ref|NP_247063.1| - 3.9e-05 23.9 13.8 0.0049 17.1 2.1 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668270|ref|NP_247063.1| - 4.7e-05 23.7 16.0 0.0065 16.8 2.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668270|ref|NP_247063.1| - 6.7e-05 23.5 14.8 0.0055 17.4 1.0 2.3 1 1 3 4 4 4 4 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|15668270|ref|NP_247063.1| - 0.018 15.6 15.0 6.3 7.4 10.4 2.5 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15668270|ref|NP_247063.1| - 0.021 15.3 22.5 0.036 14.6 2.9 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain ALS_ss_C PF10369.4 gi|15668270|ref|NP_247063.1| - 0.045 13.4 0.1 0.068 12.9 0.1 1.3 1 0 0 1 1 1 0 Small subunit of acetolactate synthase Fer4_13 PF13370.1 gi|15668270|ref|NP_247063.1| - 1.8 8.9 14.8 20 5.6 10.3 2.2 1 1 0 1 1 1 0 4Fe-4S single cluster domain DUF39 PF01837.11 gi|15668271|ref|NP_247064.1| - 5.6e-146 485.5 0.1 7.2e-146 485.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF39 CBS PF00571.23 gi|15668271|ref|NP_247064.1| - 1.3e-36 124.1 1.6 1.5e-17 63.1 0.0 2.7 2 0 0 2 2 2 2 CBS domain Ribosomal_L9_C PF03948.9 gi|15668271|ref|NP_247064.1| - 0.023 14.7 1.1 0.41 10.7 0.0 2.9 3 0 0 3 3 3 0 Ribosomal protein L9, C-terminal domain SRP54 PF00448.17 gi|15668272|ref|NP_247065.1| - 1.4e-78 262.8 1.1 1.4e-78 262.8 0.7 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|15668272|ref|NP_247065.1| - 8.3e-34 115.9 5.9 2e-33 114.7 0.9 3.2 3 0 0 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.14 gi|15668272|ref|NP_247065.1| - 3.8e-17 62.1 7.5 3.8e-17 62.1 5.2 3.5 3 2 2 5 5 3 1 SRP54-type protein, helical bundle domain CbiA PF01656.18 gi|15668272|ref|NP_247065.1| - 7.6e-10 38.5 0.2 7.6e-10 38.5 0.2 2.3 3 0 0 3 3 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.9 gi|15668272|ref|NP_247065.1| - 6e-07 29.2 0.7 1.2e-05 25.0 0.0 2.6 1 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.14 gi|15668272|ref|NP_247065.1| - 7.4e-07 28.7 1.8 1.6e-06 27.7 0.4 2.1 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.1 gi|15668272|ref|NP_247065.1| - 2.1e-06 27.8 0.4 7.9e-06 26.0 0.0 2.1 2 0 0 2 2 1 1 AAA domain Zeta_toxin PF06414.7 gi|15668272|ref|NP_247065.1| - 6e-06 25.4 0.1 1.6e-05 24.0 0.1 1.7 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.1 gi|15668272|ref|NP_247065.1| - 3.8e-05 23.7 0.0 0.00013 21.9 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.1 gi|15668272|ref|NP_247065.1| - 0.0001 21.9 0.6 0.0005 19.7 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15668272|ref|NP_247065.1| - 0.00016 22.5 1.2 0.00016 22.5 0.8 2.8 2 1 1 3 3 1 1 AAA domain 6PF2K PF01591.13 gi|15668272|ref|NP_247065.1| - 0.00024 20.2 0.3 0.00056 19.0 0.0 1.8 2 0 0 2 2 1 1 6-phosphofructo-2-kinase AAA_33 PF13671.1 gi|15668272|ref|NP_247065.1| - 0.0003 20.6 0.0 0.00064 19.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain ResIII PF04851.10 gi|15668272|ref|NP_247065.1| - 0.00043 20.1 1.6 0.001 18.9 1.1 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.1 gi|15668272|ref|NP_247065.1| - 0.00057 19.5 0.0 0.0014 18.3 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain SRPRB PF09439.5 gi|15668272|ref|NP_247065.1| - 0.00062 19.0 1.0 0.72 9.0 0.1 2.8 1 1 0 2 2 2 2 Signal recognition particle receptor beta subunit AAA_18 PF13238.1 gi|15668272|ref|NP_247065.1| - 0.00075 19.8 0.1 0.00075 19.8 0.1 2.4 2 1 0 2 2 1 1 AAA domain DUF2075 PF09848.4 gi|15668272|ref|NP_247065.1| - 0.0011 18.0 0.2 0.0011 18.0 0.2 1.7 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) MMR_HSR1 PF01926.18 gi|15668272|ref|NP_247065.1| - 0.0011 18.9 2.7 0.0019 18.1 0.1 2.6 3 0 0 3 3 2 1 50S ribosome-binding GTPase APS_kinase PF01583.15 gi|15668272|ref|NP_247065.1| - 0.0011 18.6 0.0 0.003 17.2 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase ArgK PF03308.11 gi|15668272|ref|NP_247065.1| - 0.0037 16.0 0.8 0.017 13.9 0.0 2.3 2 0 0 2 2 2 1 ArgK protein MT0933_antitox PF14013.1 gi|15668272|ref|NP_247065.1| - 0.0039 17.2 1.4 0.061 13.4 0.0 3.0 2 0 0 2 2 2 1 MT0933-like antitoxin protein KTI12 PF08433.5 gi|15668272|ref|NP_247065.1| - 0.004 16.4 0.0 0.0092 15.2 0.0 1.7 1 0 0 1 1 1 1 Chromatin associated protein KTI12 NACHT PF05729.7 gi|15668272|ref|NP_247065.1| - 0.0048 16.5 0.6 0.02 14.5 0.4 2.2 1 1 0 1 1 1 1 NACHT domain AAA_31 PF13614.1 gi|15668272|ref|NP_247065.1| - 0.0054 16.6 0.0 0.11 12.4 0.0 2.6 2 0 0 2 2 2 1 AAA domain LpxK PF02606.9 gi|15668272|ref|NP_247065.1| - 0.0069 15.3 0.1 0.017 14.0 0.0 1.6 2 0 0 2 2 2 1 Tetraacyldisaccharide-1-P 4'-kinase TrwB_AAD_bind PF10412.4 gi|15668272|ref|NP_247065.1| - 0.0076 14.9 0.7 0.019 13.6 0.0 1.8 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.1 gi|15668272|ref|NP_247065.1| - 0.013 14.9 0.6 0.15 11.4 0.4 2.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|15668272|ref|NP_247065.1| - 0.014 15.2 0.1 0.042 13.7 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|15668272|ref|NP_247065.1| - 0.015 15.0 0.0 0.04 13.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF1611 PF07755.6 gi|15668272|ref|NP_247065.1| - 0.016 13.8 0.2 0.082 11.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1611) KduI PF04962.7 gi|15668272|ref|NP_247065.1| - 0.017 14.2 0.1 0.033 13.2 0.0 1.5 2 0 0 2 2 1 0 KduI/IolB family UPF0079 PF02367.12 gi|15668272|ref|NP_247065.1| - 0.021 14.4 0.1 0.09 12.4 0.1 2.1 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 RNA_helicase PF00910.17 gi|15668272|ref|NP_247065.1| - 0.024 14.8 0.1 0.24 11.5 0.0 2.3 1 1 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.12 gi|15668272|ref|NP_247065.1| - 0.029 13.7 0.0 0.029 13.7 0.0 2.5 3 0 0 3 3 3 0 Thymidylate kinase ATP_bind_1 PF03029.12 gi|15668272|ref|NP_247065.1| - 0.029 13.9 0.1 0.15 11.5 0.0 2.4 2 1 0 2 2 1 0 Conserved hypothetical ATP binding protein AAA_10 PF12846.2 gi|15668272|ref|NP_247065.1| - 0.034 13.5 0.4 0.062 12.7 0.2 1.6 1 1 0 1 1 1 0 AAA-like domain IstB_IS21 PF01695.12 gi|15668272|ref|NP_247065.1| - 0.074 12.4 0.2 7.6 5.9 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_28 PF13521.1 gi|15668272|ref|NP_247065.1| - 0.079 12.9 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain PPV_E1_C PF00519.12 gi|15668272|ref|NP_247065.1| - 0.1 11.2 0.1 0.15 10.6 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_29 PF13555.1 gi|15668272|ref|NP_247065.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain G-alpha PF00503.15 gi|15668272|ref|NP_247065.1| - 0.13 10.9 1.9 0.085 11.5 0.1 1.8 2 0 0 2 2 2 0 G-protein alpha subunit Glyco_transf_4 PF13439.1 gi|15668272|ref|NP_247065.1| - 0.19 11.4 0.0 0.64 9.7 0.0 1.8 2 0 0 2 2 2 0 Glycosyltransferase Family 4 AAA PF00004.24 gi|15668272|ref|NP_247065.1| - 0.36 11.0 7.6 0.064 13.4 0.4 3.4 3 3 1 4 4 3 0 ATPase family associated with various cellular activities (AAA) Fe-ADH_2 PF13685.1 gi|15668272|ref|NP_247065.1| - 7.7 5.7 10.5 3 7.0 1.0 3.7 2 2 2 4 4 4 0 Iron-containing alcohol dehydrogenase Flavoprotein PF02441.14 gi|15668273|ref|NP_247066.1| - 4.5e-35 120.1 0.1 5.7e-35 119.8 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein Radical_SAM PF04055.16 gi|15668274|ref|NP_247067.1| - 1.3e-23 83.9 0.2 2.9e-23 82.8 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15668274|ref|NP_247067.1| - 0.00034 20.6 0.1 0.00095 19.1 0.1 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|15668274|ref|NP_247067.1| - 0.00036 20.6 0.2 0.00076 19.6 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain AAA_11 PF13086.1 gi|15668275|ref|NP_247068.1| - 4.5e-61 206.4 0.4 1.6e-60 204.6 0.3 2.0 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.1 gi|15668275|ref|NP_247068.1| - 2.8e-58 196.6 2.4 7.4e-58 195.2 1.7 1.8 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|15668275|ref|NP_247068.1| - 5e-10 38.9 0.0 2.1e-09 36.9 0.0 2.0 2 0 0 2 2 2 1 Part of AAA domain AAA_30 PF13604.1 gi|15668275|ref|NP_247068.1| - 1.3e-09 37.9 0.1 8e-07 28.8 0.0 2.9 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.13 gi|15668275|ref|NP_247068.1| - 6.7e-08 32.3 0.0 0.027 14.0 0.0 3.2 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase PIF1 PF05970.9 gi|15668275|ref|NP_247068.1| - 8.1e-05 21.7 0.3 0.019 13.9 0.0 2.6 2 1 0 2 2 2 1 PIF1-like helicase UvrD_C_2 PF13538.1 gi|15668275|ref|NP_247068.1| - 0.00014 21.9 0.0 0.0012 18.9 0.0 2.6 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.1 gi|15668275|ref|NP_247068.1| - 0.00038 20.6 0.9 0.0082 16.2 0.0 3.3 4 0 0 4 4 3 1 AAA domain Helicase_RecD PF05127.9 gi|15668275|ref|NP_247068.1| - 0.00073 19.2 0.3 0.0051 16.4 0.0 2.5 3 0 0 3 3 3 1 Helicase AAA PF00004.24 gi|15668275|ref|NP_247068.1| - 0.0019 18.4 0.1 0.014 15.6 0.0 2.6 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) T2SE PF00437.15 gi|15668275|ref|NP_247068.1| - 0.002 17.1 0.1 0.0071 15.2 0.0 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein UvrD-helicase PF00580.16 gi|15668275|ref|NP_247068.1| - 0.0021 17.4 6.9 0.0041 16.4 1.5 2.7 2 1 1 3 3 3 1 UvrD/REP helicase N-terminal domain DEAD PF00270.24 gi|15668275|ref|NP_247068.1| - 0.0083 15.6 0.8 0.18 11.2 0.0 2.9 3 0 0 3 3 3 1 DEAD/DEAH box helicase DUF2075 PF09848.4 gi|15668275|ref|NP_247068.1| - 0.0085 15.1 0.2 0.58 9.0 0.0 2.5 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.1 gi|15668275|ref|NP_247068.1| - 0.014 15.4 0.0 0.038 13.9 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.7 gi|15668275|ref|NP_247068.1| - 0.016 14.2 0.0 0.035 13.1 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus PhoH PF02562.11 gi|15668275|ref|NP_247068.1| - 0.016 14.4 0.1 0.1 11.8 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein ResIII PF04851.10 gi|15668275|ref|NP_247068.1| - 0.025 14.4 5.7 0.019 14.8 0.7 2.8 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit TPR_6 PF13174.1 gi|15668275|ref|NP_247068.1| - 0.089 13.2 0.3 14 6.3 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF2722 PF10846.3 gi|15668275|ref|NP_247068.1| - 0.15 11.0 0.5 0.25 10.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) UvrD_C PF13361.1 gi|15668275|ref|NP_247068.1| - 0.31 10.4 0.1 0.31 10.4 0.0 3.4 2 1 1 3 3 3 0 UvrD-like helicase C-terminal domain AAA_17 PF13207.1 gi|15668275|ref|NP_247068.1| - 7.1 7.4 10.6 1.2 9.9 0.5 3.9 2 1 0 3 3 3 0 AAA domain DUF473 PF04322.7 gi|15668276|ref|NP_247069.1| - 9.1e-35 118.8 1.5 1.1e-34 118.6 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF473) YuiB PF14068.1 gi|15668276|ref|NP_247069.1| - 0.03 14.6 0.2 0.044 14.0 0.2 1.3 1 0 0 1 1 1 0 Putative membrane protein HAS-barrel PF09378.5 gi|15668276|ref|NP_247069.1| - 0.07 13.0 0.2 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 HAS barrel domain PAC2 PF09754.4 gi|15668277|ref|NP_247070.1| - 2.2e-34 119.2 0.0 2.7e-34 118.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Pterin_bind PF00809.17 gi|15668278|ref|NP_247071.1| - 6.3e-30 104.1 0.2 1.2e-29 103.2 0.1 1.4 1 0 0 1 1 1 1 Pterin binding enzyme DUF4346 PF14251.1 gi|15668278|ref|NP_247071.1| - 3.7e-10 39.5 0.1 3.7e-09 36.3 0.2 2.5 2 1 0 2 2 2 1 Domain of unknown function (DUF4346) DUF561 PF04481.7 gi|15668278|ref|NP_247071.1| - 0.032 13.1 0.1 0.27 10.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF561) ProRS-C_1 PF09180.6 gi|15668278|ref|NP_247071.1| - 3.4 7.6 5.4 11 6.0 0.0 4.0 5 0 0 5 5 5 0 Prolyl-tRNA synthetase, C-terminal PK PF00224.16 gi|15668279|ref|NP_247072.1| - 1.4e-83 280.4 11.7 2.7e-83 279.4 8.1 1.4 1 1 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.11 gi|15668279|ref|NP_247072.1| - 1.7e-22 79.1 0.1 6.1e-22 77.3 0.0 2.0 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.9 gi|15668279|ref|NP_247072.1| - 1.5e-06 27.2 0.3 3.8e-06 25.9 0.2 1.6 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family Inositol_P PF00459.20 gi|15668280|ref|NP_247073.1| - 1.3e-46 159.1 0.0 1.5e-46 158.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|15668280|ref|NP_247073.1| - 0.00022 20.1 0.0 0.00038 19.3 0.0 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase Amidase_3 PF01520.13 gi|15668280|ref|NP_247073.1| - 0.079 12.7 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase PQ-loop PF04193.9 gi|15668281|ref|NP_247074.1| - 1.4e-10 40.5 1.1 1.4e-10 40.5 0.7 1.7 1 1 0 1 1 1 1 PQ loop repeat MtN3_slv PF03083.11 gi|15668281|ref|NP_247074.1| - 3.1e-08 33.3 3.0 3.5e-08 33.1 2.0 1.1 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange LAB_N PF07578.6 gi|15668281|ref|NP_247074.1| - 0.00063 19.6 0.8 0.00082 19.2 0.5 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain Asp-Al_Ex PF06826.7 gi|15668281|ref|NP_247074.1| - 0.0008 18.9 0.2 0.001 18.5 0.1 1.2 1 0 0 1 1 1 1 Predicted Permease Membrane Region ER_lumen_recept PF00810.13 gi|15668281|ref|NP_247074.1| - 0.02 15.4 0.8 0.031 14.7 0.0 1.6 1 1 1 2 2 2 0 ER lumen protein retaining receptor DUF2996 PF11210.3 gi|15668281|ref|NP_247074.1| - 0.1 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) Steroid_dh PF02544.11 gi|15668281|ref|NP_247074.1| - 0.13 12.0 0.8 0.49 10.1 0.6 1.7 1 1 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase PgaD PF13994.1 gi|15668281|ref|NP_247074.1| - 0.17 11.4 1.5 2.3 7.7 0.1 2.2 1 1 1 2 2 2 0 PgaD-like protein SecD_SecF PF02355.11 gi|15668282|ref|NP_247075.1| - 1.1e-20 73.6 8.1 2.6e-20 72.4 5.6 1.6 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|15668282|ref|NP_247075.1| - 1.1e-06 27.5 0.3 2.4e-06 26.4 0.2 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif ACR_tran PF00873.14 gi|15668282|ref|NP_247075.1| - 0.00029 18.4 6.7 0.00029 18.4 4.6 1.6 2 0 0 2 2 2 1 AcrB/AcrD/AcrF family MMPL PF03176.10 gi|15668282|ref|NP_247075.1| - 0.00066 18.4 6.7 0.0011 17.7 4.6 1.4 1 0 0 1 1 1 1 MMPL family Patched PF02460.13 gi|15668282|ref|NP_247075.1| - 0.13 10.1 10.4 0.18 9.6 7.2 1.1 1 0 0 1 1 1 0 Patched family CdhD PF03599.11 gi|15668283|ref|NP_247076.1| - 2.8e-163 542.9 1.4 3.4e-163 542.6 1.0 1.1 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|15668283|ref|NP_247076.1| - 2.3e-18 65.4 2.6 6.6e-18 63.9 1.8 1.9 1 0 0 1 1 1 1 Putative Fe-S cluster Pterin_bind PF00809.17 gi|15668283|ref|NP_247076.1| - 1.8e-06 27.4 1.2 3.4e-06 26.6 0.9 1.4 1 0 0 1 1 1 1 Pterin binding enzyme DUF2683 PF10884.3 gi|15668283|ref|NP_247076.1| - 0.026 14.4 3.2 0.4 10.6 0.8 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2683) Syntaxin-6_N PF09177.6 gi|15668283|ref|NP_247076.1| - 0.16 12.3 1.3 9.5 6.7 0.9 2.7 1 1 1 2 2 2 0 Syntaxin 6, N-terminal CdhD PF03599.11 gi|15668284|ref|NP_247077.1| - 2.3e-95 319.3 1.1 1.4e-89 300.3 0.0 3.0 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit Pterin_bind PF00809.17 gi|15668284|ref|NP_247077.1| - 0.0033 16.8 0.3 0.35 10.2 0.2 2.7 1 1 0 1 1 1 1 Pterin binding enzyme HSP70 PF00012.15 gi|15668284|ref|NP_247077.1| - 0.035 12.0 0.0 0.053 11.4 0.0 1.1 1 0 0 1 1 1 0 Hsp70 protein Gar1 PF04410.9 gi|15668285|ref|NP_247078.1| - 0.021 14.2 0.1 0.053 12.9 0.1 1.6 1 0 0 1 1 1 0 Gar1/Naf1 RNA binding region Lipoprotein_15 PF03640.10 gi|15668285|ref|NP_247078.1| - 0.11 11.9 0.1 0.2 11.1 0.1 1.3 1 0 0 1 1 1 0 Secreted repeat of unknown function SHOCT PF09851.4 gi|15668286|ref|NP_247079.1| - 0.093 12.2 0.4 1.9 8.0 0.0 2.4 2 0 0 2 2 2 0 Short C-terminal domain STAT1_TAZ2bind PF12162.3 gi|15668286|ref|NP_247079.1| - 0.12 11.7 0.2 17 4.9 0.0 2.3 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain Creatininase PF02633.9 gi|15668287|ref|NP_247080.1| - 5.3e-22 78.0 0.0 1.6e-21 76.5 0.0 1.6 1 1 0 1 1 1 1 Creatinine amidohydrolase Autophagy_Cterm PF10381.4 gi|15668287|ref|NP_247080.1| - 0.13 11.4 0.1 0.24 10.5 0.1 1.5 1 0 0 1 1 1 0 Autophagocytosis associated protein C-terminal Nop10p PF04135.7 gi|15668288|ref|NP_247081.1| - 8.5e-25 86.2 1.2 9.7e-25 86.0 0.8 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family PolC_DP2 PF03833.8 gi|15668288|ref|NP_247081.1| - 6.6e-05 20.8 0.1 6.6e-05 20.8 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 zf-NADH-PPase PF09297.6 gi|15668288|ref|NP_247081.1| - 0.0022 17.4 0.6 0.54 9.8 0.0 2.2 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|15668288|ref|NP_247081.1| - 0.0031 17.3 2.9 0.18 11.6 0.1 2.2 1 1 1 2 2 2 2 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.2 gi|15668288|ref|NP_247081.1| - 0.0031 17.2 1.6 0.0049 16.6 1.1 1.4 1 1 0 1 1 1 1 Double zinc ribbon zf-C4_Topoisom PF01396.14 gi|15668288|ref|NP_247081.1| - 0.0035 16.8 4.3 0.35 10.3 0.4 2.4 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger RecR PF02132.10 gi|15668288|ref|NP_247081.1| - 0.0057 16.0 0.3 0.0077 15.6 0.2 1.3 1 0 0 1 1 1 1 RecR protein UPF0547 PF10571.4 gi|15668288|ref|NP_247081.1| - 0.013 15.2 2.3 0.98 9.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.1 gi|15668288|ref|NP_247081.1| - 0.016 14.3 8.1 0.48 9.7 0.5 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-tcix PF14952.1 gi|15668288|ref|NP_247081.1| - 0.017 14.4 1.3 0.017 14.4 0.9 2.7 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-ISL3 PF14690.1 gi|15668288|ref|NP_247081.1| - 0.04 13.9 5.9 0.35 10.9 0.2 2.3 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_2 PF13240.1 gi|15668288|ref|NP_247081.1| - 0.066 12.7 8.8 0.8 9.2 0.6 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF1272 PF06906.6 gi|15668288|ref|NP_247081.1| - 0.068 13.0 2.8 0.11 12.4 2.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zf-TFIIB PF13453.1 gi|15668288|ref|NP_247081.1| - 0.1 11.7 2.4 4.3 6.6 0.0 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger WASH-7_N PF14745.1 gi|15668288|ref|NP_247081.1| - 0.13 10.4 0.1 0.14 10.3 0.1 1.0 1 0 0 1 1 1 0 WASH complex subunit 7, N-terminal TFIIS_C PF01096.13 gi|15668288|ref|NP_247081.1| - 0.21 11.2 4.0 3.6 7.2 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF1936 PF09151.5 gi|15668288|ref|NP_247081.1| - 0.27 10.7 7.8 2 7.9 0.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1936) zinc_ribbon_5 PF13719.1 gi|15668288|ref|NP_247081.1| - 0.31 10.6 3.4 9.4 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668288|ref|NP_247081.1| - 0.33 10.6 3.6 9.5 6.0 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ogr_Delta PF04606.7 gi|15668288|ref|NP_247081.1| - 0.4 10.3 4.4 1.1 9.0 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Cys_rich_CPCC PF14206.1 gi|15668288|ref|NP_247081.1| - 0.45 10.1 3.0 8.4 6.0 0.1 2.2 1 1 1 2 2 2 0 Cysteine-rich CPCC DNA_ligase_ZBD PF03119.11 gi|15668288|ref|NP_247081.1| - 0.54 10.0 5.2 1.9 8.2 0.4 2.1 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain PhnA_Zn_Ribbon PF08274.7 gi|15668288|ref|NP_247081.1| - 0.55 10.0 4.2 10 5.9 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-H2C2_2 PF13465.1 gi|15668288|ref|NP_247081.1| - 0.58 10.5 3.8 7.7 7.0 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2HC_2 PF13913.1 gi|15668288|ref|NP_247081.1| - 0.67 9.6 8.9 3.7 7.3 0.6 2.6 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-FPG_IleRS PF06827.9 gi|15668288|ref|NP_247081.1| - 0.71 9.5 4.9 5.1 6.8 3.5 2.0 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS DUF1610 PF07754.6 gi|15668288|ref|NP_247081.1| - 0.88 9.7 12.0 1 9.5 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Lar_restr_allev PF14354.1 gi|15668288|ref|NP_247081.1| - 0.94 9.8 7.0 1.2 9.5 0.3 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 gi|15668288|ref|NP_247081.1| - 1.2 9.1 6.8 5.3 7.0 0.4 2.2 1 1 1 2 2 2 0 Zinc ribbon domain Auto_anti-p27 PF06677.7 gi|15668288|ref|NP_247081.1| - 1.2 8.9 8.5 2.5 7.9 0.5 2.3 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) OrfB_Zn_ribbon PF07282.6 gi|15668288|ref|NP_247081.1| - 1.3 8.6 4.8 9.9 5.9 0.1 2.5 1 1 3 4 4 4 0 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|15668288|ref|NP_247081.1| - 1.7 8.5 7.5 2.8 7.8 0.6 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|15668288|ref|NP_247081.1| - 1.9 7.8 7.9 2 7.8 0.5 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding DUF2082 PF09855.4 gi|15668288|ref|NP_247081.1| - 2.1 8.2 6.1 9.1 6.2 0.4 2.2 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-IS66 PF13005.2 gi|15668288|ref|NP_247081.1| - 2.2 8.3 5.7 68 3.5 3.9 2.2 1 1 0 1 1 1 0 zinc-finger binding domain of transposase IS66 zf-HIT PF04438.11 gi|15668288|ref|NP_247081.1| - 2.8 7.6 7.6 11 5.7 0.2 2.6 3 0 0 3 3 3 0 HIT zinc finger Cys_rich_KTR PF14205.1 gi|15668288|ref|NP_247081.1| - 3.2 7.2 6.2 2.7 7.5 0.5 2.2 1 1 1 2 2 2 0 Cysteine-rich KTR zf-dskA_traR PF01258.12 gi|15668288|ref|NP_247081.1| - 3.6 7.4 6.2 3 7.6 0.5 2.2 1 1 1 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DUF3797 PF12677.2 gi|15668288|ref|NP_247081.1| - 3.6 7.2 6.1 9.4 5.9 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-CCHC_5 PF14787.1 gi|15668288|ref|NP_247081.1| - 5.6 6.5 8.6 4.4 6.8 0.4 2.3 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger YhfH PF14149.1 gi|15668288|ref|NP_247081.1| - 5.9 6.7 9.9 4.7 7.0 1.9 2.3 1 1 1 2 2 2 0 YhfH-like protein DUF329 PF03884.9 gi|15668288|ref|NP_247081.1| - 7.8 6.1 6.8 9 5.9 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-CCHC PF00098.18 gi|15668288|ref|NP_247081.1| - 9.1 6.4 7.9 11 6.2 0.3 2.2 2 0 0 2 2 2 0 Zinc knuckle EIF_2_alpha PF07541.7 gi|15668289|ref|NP_247082.1| - 3.2e-36 123.5 1.0 6.9e-36 122.4 0.7 1.6 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|15668289|ref|NP_247082.1| - 3.4e-18 65.4 0.9 3.4e-18 65.4 0.6 2.0 2 1 0 2 2 2 1 S1 RNA binding domain EXOSC1 PF10447.4 gi|15668289|ref|NP_247082.1| - 0.0035 17.2 0.0 2.2 8.3 0.0 2.6 2 0 0 2 2 2 2 Exosome component EXOSC1/CSL4 LON PF02190.11 gi|15668289|ref|NP_247082.1| - 0.12 12.0 1.4 0.25 10.9 1.0 1.6 1 1 0 1 1 1 0 ATP-dependent protease La (LON) domain MCR_D PF02505.9 gi|15668290|ref|NP_247083.1| - 7.6e-71 236.6 1.8 8.8e-71 236.4 1.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D FeS PF04060.8 gi|15668291|ref|NP_247084.1| - 3.6e-16 58.4 2.3 6.8e-16 57.5 1.6 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster ApoC-I PF04691.7 gi|15668291|ref|NP_247084.1| - 0.12 12.0 0.2 0.3 10.7 0.0 1.7 2 0 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) TFIID-18kDa PF02269.11 gi|15668291|ref|NP_247084.1| - 0.13 12.1 0.7 0.29 10.9 0.5 1.6 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit cobW PF02492.14 gi|15668292|ref|NP_247085.1| - 4.3e-18 65.3 0.0 6.9e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.1 gi|15668292|ref|NP_247085.1| - 9.1e-05 22.1 0.1 0.0002 21.0 0.1 1.6 1 0 0 1 1 1 1 Part of AAA domain SRP54 PF00448.17 gi|15668292|ref|NP_247085.1| - 0.00017 21.1 0.0 0.0022 17.4 0.0 2.5 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain ArgK PF03308.11 gi|15668292|ref|NP_247085.1| - 0.00018 20.4 0.2 0.047 12.4 0.1 2.3 2 0 0 2 2 2 2 ArgK protein MobB PF03205.9 gi|15668292|ref|NP_247085.1| - 0.00023 20.8 0.3 0.00051 19.7 0.2 1.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B DUF917 PF06032.7 gi|15668292|ref|NP_247085.1| - 0.0011 17.6 0.0 0.0016 17.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF917) CbiA PF01656.18 gi|15668292|ref|NP_247085.1| - 0.0012 18.3 0.2 0.0029 17.0 0.2 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zot PF05707.7 gi|15668292|ref|NP_247085.1| - 0.0025 17.3 0.0 0.0038 16.7 0.0 1.3 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) Zeta_toxin PF06414.7 gi|15668292|ref|NP_247085.1| - 0.0037 16.3 0.0 0.005 15.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin DUF2075 PF09848.4 gi|15668292|ref|NP_247085.1| - 0.012 14.5 0.1 0.017 14.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_10 PF12846.2 gi|15668292|ref|NP_247085.1| - 0.023 14.1 0.0 0.027 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain PduV-EutP PF10662.4 gi|15668292|ref|NP_247085.1| - 0.024 14.1 0.3 0.37 10.2 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation TK PF00265.13 gi|15668292|ref|NP_247085.1| - 0.034 13.7 0.0 0.066 12.7 0.0 1.5 1 0 0 1 1 1 0 Thymidine kinase TrwB_AAD_bind PF10412.4 gi|15668292|ref|NP_247085.1| - 0.068 11.7 0.0 0.095 11.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Viral_helicase1 PF01443.13 gi|15668292|ref|NP_247085.1| - 0.087 12.3 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.16 gi|15668292|ref|NP_247085.1| - 0.092 12.0 0.3 0.17 11.1 0.2 1.4 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain LpxK PF02606.9 gi|15668292|ref|NP_247085.1| - 0.12 11.3 0.3 0.4 9.5 0.2 1.7 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_18 PF13238.1 gi|15668292|ref|NP_247085.1| - 0.13 12.5 0.9 0.3 11.3 0.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|15668292|ref|NP_247085.1| - 0.16 11.5 0.1 0.25 10.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|15668293|ref|NP_247086.1| - 5.5e-14 52.6 0.1 9.9e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15668293|ref|NP_247086.1| - 1.6e-07 31.5 0.2 5.8e-06 26.4 0.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|15668293|ref|NP_247086.1| - 5.1e-05 22.7 0.0 9.8e-05 21.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|15668293|ref|NP_247086.1| - 0.0001 21.6 1.0 0.00045 19.5 0.5 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|15668293|ref|NP_247086.1| - 0.013 15.5 0.4 0.086 12.9 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15668293|ref|NP_247086.1| - 0.014 16.2 0.2 0.046 14.5 0.0 2.1 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|15668293|ref|NP_247086.1| - 0.015 14.9 0.0 0.038 13.7 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Arch_ATPase PF01637.13 gi|15668293|ref|NP_247086.1| - 0.016 14.9 1.3 0.04 13.5 0.2 2.1 2 1 0 2 2 2 0 Archaeal ATPase AAA_23 PF13476.1 gi|15668293|ref|NP_247086.1| - 0.017 15.4 0.3 0.069 13.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|15668293|ref|NP_247086.1| - 0.021 14.3 0.0 0.047 13.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|15668293|ref|NP_247086.1| - 0.028 14.4 0.1 0.049 13.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.7 gi|15668293|ref|NP_247086.1| - 0.039 13.0 0.1 0.19 10.8 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_30 PF13604.1 gi|15668293|ref|NP_247086.1| - 0.041 13.4 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|15668293|ref|NP_247086.1| - 0.11 12.4 0.1 1.5 8.7 0.0 2.4 1 1 1 2 2 2 0 AAA domain PhoH PF02562.11 gi|15668293|ref|NP_247086.1| - 0.12 11.5 2.7 2.8 7.1 0.1 2.9 2 1 1 3 3 3 0 PhoH-like protein IF-2B PF01008.12 gi|15668294|ref|NP_247087.1| - 2.8e-96 321.8 0.8 3.2e-96 321.6 0.6 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family 2-Hacid_dh_C PF02826.14 gi|15668294|ref|NP_247087.1| - 0.029 13.5 0.0 0.065 12.3 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TraC PF07820.7 gi|15668294|ref|NP_247087.1| - 0.052 13.7 0.3 0.1 12.8 0.2 1.5 1 0 0 1 1 1 0 TraC-like protein Myosin_HC-like PF07058.6 gi|15668294|ref|NP_247087.1| - 0.082 11.9 0.3 0.33 9.9 0.2 1.9 2 1 0 2 2 2 0 Myosin II heavy chain-like CPSase_L_chain PF00289.17 gi|15668294|ref|NP_247087.1| - 0.092 12.8 1.1 4.1 7.5 0.1 2.3 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain ThiF PF00899.16 gi|15668294|ref|NP_247087.1| - 0.11 12.3 0.9 19 5.1 0.5 2.9 2 1 0 2 2 2 0 ThiF family DUF45 PF01863.12 gi|15668295|ref|NP_247088.1| - 1.8e-10 40.9 0.4 2.2e-10 40.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 Peptidase_M56 PF05569.6 gi|15668295|ref|NP_247088.1| - 8.4e-05 21.6 3.5 0.0001 21.3 2.5 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 SprT-like PF10263.4 gi|15668295|ref|NP_247088.1| - 0.00012 21.7 0.1 0.00014 21.5 0.1 1.2 1 0 0 1 1 1 1 SprT-like family TRAPPC-Trs85 PF12739.2 gi|15668295|ref|NP_247088.1| - 0.15 10.6 0.0 0.19 10.3 0.0 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit DUF1002 PF06207.6 gi|15668295|ref|NP_247088.1| - 0.16 11.2 2.0 0.22 10.7 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) WLM PF08325.5 gi|15668295|ref|NP_247088.1| - 0.54 10.1 2.1 0.72 9.7 1.4 1.5 1 1 0 1 1 1 0 WLM domain HSDR_N PF04313.9 gi|298575366|ref|NP_247089.4| - 9.2e-27 94.0 0.2 9.2e-27 94.0 0.1 5.3 5 2 1 6 6 6 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|298575366|ref|NP_247089.4| - 3e-21 76.0 9.3 3e-21 76.0 6.5 4.5 4 1 0 4 4 4 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|298575366|ref|NP_247089.4| - 0.11 12.4 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Helicase conserved C-terminal domain DUF86 PF01934.12 gi|15668296|ref|NP_247090.1| - 7.7e-26 90.0 0.7 9.4e-26 89.7 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 NTP_transf_2 PF01909.18 gi|15668297|ref|NP_247091.1| - 1.7e-20 73.1 3.3 2.1e-20 72.8 2.3 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15668297|ref|NP_247091.1| - 0.0001 22.2 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm Adenyl_cycl_N PF12633.2 gi|15668297|ref|NP_247091.1| - 0.0045 16.5 0.0 0.0048 16.4 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF294 PF03445.8 gi|15668297|ref|NP_247091.1| - 0.035 13.7 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 MdcG PF10620.4 gi|15668297|ref|NP_247091.1| - 0.095 12.2 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG DUF86 PF01934.12 gi|15668298|ref|NP_247092.1| - 1.1e-27 96.0 1.1 1.3e-27 95.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF4268 PF14088.1 gi|15668298|ref|NP_247092.1| - 0.085 12.5 0.1 0.19 11.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4268) NTP_transf_2 PF01909.18 gi|15668299|ref|NP_247093.1| - 3.2e-19 69.0 3.6 3.8e-19 68.8 2.5 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15668299|ref|NP_247093.1| - 0.00088 19.3 0.0 0.00088 19.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm Adenyl_cycl_N PF12633.2 gi|15668299|ref|NP_247093.1| - 0.04 13.4 0.0 0.042 13.3 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain DUF294 PF03445.8 gi|15668299|ref|NP_247093.1| - 0.046 13.3 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 YqjK PF13997.1 gi|15668300|ref|NP_247094.1| - 0.13 12.4 0.0 0.33 11.1 0.0 1.7 1 0 0 1 1 1 0 YqjK-like protein Methylase_S PF01420.14 gi|298575369|ref|NP_247095.2| - 1.3e-61 207.4 21.0 7.8e-42 143.0 9.7 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.11 gi|15668302|ref|NP_247097.1| - 1.3e-54 185.3 0.1 1.7e-54 185.0 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Utp21 PF04192.7 gi|15668302|ref|NP_247097.1| - 0.028 13.5 0.0 0.05 12.6 0.0 1.3 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain BSD PF03909.12 gi|15668302|ref|NP_247097.1| - 0.038 13.7 1.4 0.34 10.6 0.0 3.0 4 0 0 4 4 4 0 BSD domain AP_endonuc_2 PF01261.19 gi|15668303|ref|NP_247099.1| - 2.2e-19 69.6 0.0 2.7e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.9 gi|15668303|ref|NP_247099.1| - 9.3e-06 24.8 0.1 1.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 UV-endonuclease UvdE GCD14 PF08704.5 gi|15668304|ref|NP_247100.1| - 5.2e-31 108.0 0.2 3e-28 98.9 0.0 3.1 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.1 gi|15668304|ref|NP_247100.1| - 4.6e-09 36.0 0.5 8.9e-05 22.1 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668304|ref|NP_247100.1| - 2.8e-08 34.3 0.0 5e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|15668304|ref|NP_247100.1| - 1.1e-06 27.8 0.2 2.7e-06 26.6 0.0 1.6 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family RrnaAD PF00398.15 gi|15668304|ref|NP_247100.1| - 1.2e-06 27.8 0.0 2.1e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|15668304|ref|NP_247100.1| - 7.7e-06 25.5 0.0 1.2e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|15668304|ref|NP_247100.1| - 1.6e-05 24.9 0.0 2.5e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15668304|ref|NP_247100.1| - 0.0013 18.4 0.1 0.0039 16.9 0.0 1.9 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_24 PF13578.1 gi|15668304|ref|NP_247100.1| - 0.0014 19.4 0.0 0.004 17.9 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15668304|ref|NP_247100.1| - 0.0032 17.9 0.1 0.0083 16.5 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|15668304|ref|NP_247100.1| - 0.013 15.4 0.1 0.04 13.9 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase PrmA PF06325.8 gi|15668304|ref|NP_247100.1| - 0.013 14.6 0.2 0.052 12.6 0.0 1.8 1 1 1 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_3 PF01596.12 gi|15668304|ref|NP_247100.1| - 0.017 14.1 0.1 0.027 13.5 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_11 PF08241.7 gi|15668304|ref|NP_247100.1| - 0.017 15.5 0.0 0.061 13.8 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_32 PF13679.1 gi|15668304|ref|NP_247100.1| - 0.055 13.1 0.0 0.089 12.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15668304|ref|NP_247100.1| - 0.06 13.7 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain PTR PF12789.2 gi|15668304|ref|NP_247100.1| - 0.12 12.2 0.2 1.2 9.0 0.0 2.6 3 0 0 3 3 3 0 Phage tail repeat like RNase_HII PF01351.13 gi|15668305|ref|NP_247101.1| - 2.3e-68 229.7 1.7 2.7e-68 229.5 1.2 1.0 1 0 0 1 1 1 1 Ribonuclease HII Ub-RnfH PF03658.9 gi|15668305|ref|NP_247101.1| - 0.014 15.2 0.2 0.025 14.4 0.1 1.4 1 0 0 1 1 1 0 RnfH family Ubiquitin TerB-C PF15615.1 gi|15668305|ref|NP_247101.1| - 0.014 15.6 2.6 0.024 14.9 0.7 1.9 2 1 0 2 2 2 0 TerB-C domain OmpH PF03938.9 gi|15668305|ref|NP_247101.1| - 0.019 14.9 3.2 0.028 14.3 2.2 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4332 PF14229.1 gi|15668305|ref|NP_247101.1| - 0.025 14.5 0.8 0.047 13.6 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) Mgr1 PF08602.5 gi|15668305|ref|NP_247101.1| - 0.21 10.5 3.2 0.3 10.0 2.2 1.3 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit DUF1297 PF06973.7 gi|15668306|ref|NP_247102.1| - 1.2e-87 292.0 0.0 1.6e-87 291.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|15668306|ref|NP_247102.1| - 3.7e-52 175.3 0.0 6.1e-52 174.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|15668306|ref|NP_247102.1| - 5.1e-05 23.0 0.0 0.00018 21.3 0.0 1.9 2 0 0 2 2 2 1 ATP-grasp domain SDH_sah PF01972.11 gi|15668307|ref|NP_247103.1| - 9.5e-164 543.0 1.1 1.1e-163 542.9 0.8 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.18 gi|15668307|ref|NP_247103.1| - 2.8e-11 43.4 0.4 3.4e-09 36.6 0.0 2.2 2 0 0 2 2 2 2 Clp protease ECH PF00378.15 gi|15668307|ref|NP_247103.1| - 7.8e-05 21.9 0.2 0.00035 19.7 0.1 1.9 1 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase family Peptidase_S49 PF01343.13 gi|15668307|ref|NP_247103.1| - 0.0037 17.0 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 CbiA PF01656.18 gi|15668308|ref|NP_247104.1| - 3.1e-15 56.1 0.1 7e-15 54.9 0.1 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GATase_3 PF07685.9 gi|15668308|ref|NP_247104.1| - 6.5e-14 51.8 0.0 1.1e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.1 gi|15668308|ref|NP_247104.1| - 4.5e-12 45.9 0.7 3.1e-09 36.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain SNO PF01174.14 gi|15668308|ref|NP_247104.1| - 1.8e-05 24.4 0.3 4.7e-05 23.0 0.2 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|15668308|ref|NP_247104.1| - 0.00059 19.3 0.1 0.003 17.0 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase class-I Zeta_toxin PF06414.7 gi|15668308|ref|NP_247104.1| - 0.0026 16.8 0.0 0.0047 16.0 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin DUF4066 PF13278.1 gi|15668308|ref|NP_247104.1| - 0.011 15.0 0.0 0.022 14.0 0.0 1.4 1 0 0 1 1 1 0 Putative amidotransferase DJ-1_PfpI PF01965.19 gi|15668308|ref|NP_247104.1| - 0.03 13.7 0.0 0.12 11.8 0.0 1.9 2 0 0 2 2 2 0 DJ-1/PfpI family GATase_5 PF13507.1 gi|15668308|ref|NP_247104.1| - 0.052 12.4 0.0 0.18 10.6 0.0 1.9 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain AAA_17 PF13207.1 gi|15668308|ref|NP_247104.1| - 0.48 11.2 3.5 1.6 9.5 0.1 3.1 2 1 1 3 3 3 0 AAA domain AAA_18 PF13238.1 gi|15668308|ref|NP_247104.1| - 0.66 10.2 0.0 0.66 10.2 0.0 3.0 2 1 1 3 3 3 0 AAA domain Ion_trans_2 PF07885.11 gi|15668309|ref|NP_247105.1| - 4e-16 58.4 6.6 4e-16 58.4 4.6 2.7 2 1 0 2 2 2 1 Ion channel Ion_trans PF00520.26 gi|15668309|ref|NP_247105.1| - 6.7e-13 48.3 27.3 1.1e-12 47.6 16.5 2.6 2 1 0 2 2 2 1 Ion transport protein Ceramidase PF05875.7 gi|15668309|ref|NP_247105.1| - 0.064 12.3 8.7 0.08 12.0 5.2 1.6 1 1 0 1 1 1 0 Ceramidase 7TMR-DISM_7TM PF07695.6 gi|15668309|ref|NP_247105.1| - 1.1 8.8 23.6 3.3 7.3 14.4 2.5 1 1 1 2 2 2 0 7TM diverse intracellular signalling TrkA_N PF02254.13 gi|15668310|ref|NP_247106.1| - 7e-34 116.2 0.5 1.3e-33 115.4 0.1 1.7 2 0 0 2 2 2 1 TrkA-N domain Ion_trans_2 PF07885.11 gi|15668310|ref|NP_247106.1| - 3.9e-17 61.7 13.9 6.7e-17 60.9 9.7 1.4 1 0 0 1 1 1 1 Ion channel TrkA_C PF02080.16 gi|15668310|ref|NP_247106.1| - 1.6e-14 53.1 0.0 3e-14 52.3 0.0 1.4 1 0 0 1 1 1 1 TrkA-C domain Ion_trans PF00520.26 gi|15668310|ref|NP_247106.1| - 0.011 15.0 3.1 0.011 15.0 2.1 1.7 1 1 0 1 1 1 0 Ion transport protein Methyltransf_31 PF13847.1 gi|15668310|ref|NP_247106.1| - 0.03 13.8 0.1 0.077 12.5 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain 3HCDH_N PF02737.13 gi|15668310|ref|NP_247106.1| - 0.042 13.5 0.0 0.069 12.8 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|15668312|ref|NP_247108.1| - 5.9e-21 74.6 0.6 1.5e-20 73.3 0.2 1.7 2 0 0 2 2 2 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|15668312|ref|NP_247108.1| - 2e-05 24.5 0.3 3.2e-05 23.9 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain NAD_Gly3P_dh_N PF01210.18 gi|15668312|ref|NP_247108.1| - 6.7e-05 22.6 0.1 0.0001 22.1 0.1 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Saccharop_dh PF03435.13 gi|15668312|ref|NP_247108.1| - 0.00014 20.9 0.0 0.00014 20.9 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase IlvN PF07991.7 gi|15668312|ref|NP_247108.1| - 0.00018 20.9 0.8 0.00054 19.3 0.6 1.8 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain ELFV_dehydrog PF00208.16 gi|15668312|ref|NP_247108.1| - 0.003 17.1 2.1 0.0081 15.7 1.5 1.7 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.16 gi|15668312|ref|NP_247108.1| - 0.007 16.1 4.3 1.3 8.8 0.1 2.3 1 1 1 2 2 2 2 ThiF family NAD_binding_2 PF03446.10 gi|15668312|ref|NP_247108.1| - 0.0082 15.9 0.0 0.13 12.0 0.0 2.1 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh PF00389.25 gi|15668312|ref|NP_247108.1| - 0.021 14.3 0.3 0.021 14.3 0.2 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 2-Hacid_dh_C PF02826.14 gi|15668312|ref|NP_247108.1| - 0.027 13.6 0.3 0.063 12.4 0.2 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain tRNA-synt_1_2 PF13603.1 gi|15668312|ref|NP_247108.1| - 0.048 12.9 0.9 0.08 12.2 0.3 1.6 1 1 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 FKBP_N PF01346.13 gi|15668312|ref|NP_247108.1| - 0.078 13.0 1.0 0.52 10.3 0.0 2.1 2 0 0 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PTS_IIB PF02302.12 gi|15668312|ref|NP_247108.1| - 0.096 13.1 0.7 0.47 10.9 0.5 2.2 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit DUF1192 PF06698.6 gi|15668312|ref|NP_247108.1| - 0.12 12.2 0.5 8.3 6.3 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) DUF771 PF05595.6 gi|15668312|ref|NP_247108.1| - 0.84 9.5 11.2 0.071 13.0 1.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF771) AdoHcyase_NAD PF00670.16 gi|15668312|ref|NP_247108.1| - 1.1 9.0 5.6 1.3 8.8 0.6 2.2 1 1 1 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Herpes_UL92 PF03048.9 gi|15668312|ref|NP_247108.1| - 2.8 7.4 7.1 0.52 9.8 0.4 2.2 1 1 1 2 2 2 0 UL92 family EcoEI_R_C PF08463.5 gi|15668312|ref|NP_247108.1| - 2.9 7.7 9.9 3.1 7.6 1.8 2.3 2 0 0 2 2 2 0 EcoEI R protein C-terminal MSP7_C PF12948.2 gi|15668312|ref|NP_247108.1| - 6.2 7.0 16.1 0.047 13.9 2.9 2.7 1 1 0 2 2 2 0 MSP7-like protein C-terminal domain DUF4355 PF14265.1 gi|15668312|ref|NP_247108.1| - 7 6.6 12.1 1.3 9.0 3.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) Armet PF10208.4 gi|15668312|ref|NP_247108.1| - 7.2 6.2 8.9 0.51 9.9 0.8 2.3 2 1 0 2 2 2 0 Degradation arginine-rich protein for mis-folding NTP_transf_2 PF01909.18 gi|15668313|ref|NP_247109.1| - 1.5e-14 54.0 3.6 1.7e-14 53.8 2.5 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15668313|ref|NP_247109.1| - 0.0032 17.5 0.1 0.0035 17.3 0.1 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm HEPN PF05168.9 gi|15668314|ref|NP_247110.1| - 3.8e-25 88.0 7.0 4.7e-25 87.7 4.9 1.1 1 0 0 1 1 1 1 HEPN domain DUF1803 PF08820.5 gi|15668314|ref|NP_247110.1| - 0.0063 16.2 1.0 0.013 15.1 0.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1803) AcylCoA_dehyd_C PF12186.3 gi|15668314|ref|NP_247110.1| - 0.027 14.3 0.2 0.046 13.5 0.1 1.4 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal THP2 PF09432.5 gi|15668314|ref|NP_247110.1| - 0.42 10.4 3.4 0.58 10.0 0.7 2.2 2 1 0 2 2 2 0 Tho complex subunit THP2 Shikimate_DH PF01488.15 gi|15668315|ref|NP_247111.1| - 2.6e-41 140.8 0.4 2.6e-41 140.8 0.3 2.2 3 0 0 3 3 2 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.10 gi|15668315|ref|NP_247111.1| - 6.7e-36 123.1 0.5 1.8e-35 121.7 0.1 2.0 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.15 gi|15668315|ref|NP_247111.1| - 4e-15 55.5 1.7 4e-15 55.5 1.2 2.4 3 0 0 3 3 3 1 Glutamyl-tRNAGlu reductase, dimerisation domain OCD_Mu_crystall PF02423.10 gi|15668315|ref|NP_247111.1| - 1.7e-08 33.6 0.0 2.5e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family F420_oxidored PF03807.12 gi|15668315|ref|NP_247111.1| - 1.9e-08 34.6 0.8 1.9e-08 34.6 0.6 2.0 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|15668315|ref|NP_247111.1| - 6e-07 28.7 0.3 1.2e-06 27.8 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|15668315|ref|NP_247111.1| - 4.4e-06 26.8 0.9 9.8e-06 25.7 0.1 2.0 2 0 0 2 2 1 1 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.14 gi|15668315|ref|NP_247111.1| - 7.9e-05 21.7 0.2 0.011 14.7 0.0 2.6 3 0 0 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Saccharop_dh PF03435.13 gi|15668315|ref|NP_247111.1| - 0.00018 20.6 0.1 0.00029 19.9 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_2 PF03446.10 gi|15668315|ref|NP_247111.1| - 0.00045 20.0 0.3 0.0013 18.6 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase TroA PF01297.12 gi|15668315|ref|NP_247111.1| - 0.0014 17.9 0.2 0.0028 16.9 0.1 1.5 1 0 0 1 1 1 1 Periplasmic solute binding protein family DapB_N PF01113.15 gi|15668315|ref|NP_247111.1| - 0.0024 17.7 0.1 0.0096 15.8 0.0 2.1 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.1 gi|15668315|ref|NP_247111.1| - 0.0031 17.5 0.0 0.0058 16.6 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding TrkA_N PF02254.13 gi|15668315|ref|NP_247111.1| - 0.0033 17.4 0.2 0.013 15.5 0.2 2.1 1 0 0 1 1 1 1 TrkA-N domain CPSase_L_chain PF00289.17 gi|15668315|ref|NP_247111.1| - 0.0057 16.7 0.1 0.017 15.2 0.1 1.8 2 0 0 2 2 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain AdoHcyase_NAD PF00670.16 gi|15668315|ref|NP_247111.1| - 0.0085 15.9 0.2 0.033 14.0 0.1 2.0 1 1 1 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OTCace PF00185.19 gi|15668315|ref|NP_247111.1| - 0.01 15.7 0.9 0.023 14.5 0.0 2.1 2 1 1 3 3 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF3530 PF12048.3 gi|15668315|ref|NP_247111.1| - 0.015 14.2 0.1 0.026 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Hydrolase_6 PF13344.1 gi|15668315|ref|NP_247111.1| - 0.016 15.0 0.9 0.051 13.4 0.1 2.3 2 2 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Oxidored_nitro PF00148.14 gi|15668315|ref|NP_247111.1| - 0.032 12.8 0.6 0.12 10.9 0.3 2.0 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Mannitol_dh PF01232.18 gi|15668315|ref|NP_247111.1| - 0.038 13.9 1.3 0.075 12.9 0.1 2.1 2 1 0 2 2 2 0 Mannitol dehydrogenase Rossmann domain IlvN PF07991.7 gi|15668315|ref|NP_247111.1| - 0.049 13.0 0.1 0.086 12.1 0.1 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain GFO_IDH_MocA PF01408.17 gi|15668315|ref|NP_247111.1| - 0.049 14.1 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Hydrolase PF00702.21 gi|15668315|ref|NP_247111.1| - 0.056 13.8 0.4 0.099 13.0 0.3 1.5 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase PK_C PF02887.11 gi|15668315|ref|NP_247111.1| - 0.08 12.4 0.1 1.1 8.7 0.0 2.4 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain Semialdhyde_dh PF01118.19 gi|15668315|ref|NP_247111.1| - 0.09 13.0 0.0 0.28 11.5 0.0 1.9 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Transketolase_C PF02780.15 gi|15668315|ref|NP_247111.1| - 0.093 12.6 1.0 0.16 11.8 0.1 1.9 2 0 0 2 2 1 0 Transketolase, C-terminal domain VWA_2 PF13519.1 gi|15668315|ref|NP_247111.1| - 0.18 11.8 0.1 0.32 11.0 0.0 1.3 1 0 0 1 1 1 0 von Willebrand factor type A domain DUF1664 PF07889.7 gi|15668315|ref|NP_247111.1| - 0.26 11.0 3.8 0.25 11.1 1.2 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF1664) Ribosomal_L22 PF00237.14 gi|15668315|ref|NP_247111.1| - 0.35 10.8 3.2 0.7 9.8 0.1 2.7 3 1 0 3 3 2 0 Ribosomal protein L22p/L17e DUF2007 PF09413.5 gi|15668315|ref|NP_247111.1| - 1.2 9.0 4.4 24 4.8 0.0 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF2007) Hydrolase_3 PF08282.7 gi|15668315|ref|NP_247111.1| - 1.2 8.6 12.4 20 4.6 5.9 3.4 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase DUF1635 PF07795.6 gi|15668315|ref|NP_247111.1| - 2 7.7 6.3 7.8 5.8 2.8 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1635) Dus PF01207.12 gi|15668316|ref|NP_247112.1| - 5.6e-09 35.2 0.0 2.8e-05 23.1 0.0 3.0 3 0 0 3 3 3 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.16 gi|15668316|ref|NP_247112.1| - 0.013 14.4 0.2 0.023 13.6 0.1 1.4 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase DUF655 PF04919.7 gi|15668316|ref|NP_247112.1| - 0.016 14.9 0.2 0.081 12.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF655) Fer4_12 PF13353.1 gi|15668316|ref|NP_247112.1| - 0.024 14.7 0.9 0.28 11.2 0.0 2.5 2 1 0 3 3 3 0 4Fe-4S single cluster domain ApoC-I PF04691.7 gi|15668316|ref|NP_247112.1| - 3.4 7.4 7.4 15 5.3 0.3 3.2 3 0 0 3 3 3 0 Apolipoprotein C-I (ApoC-1) GGDN PF05165.7 gi|15668317|ref|NP_247113.1| - 6e-129 428.3 0.3 6.8e-129 428.1 0.2 1.0 1 0 0 1 1 1 1 GGDN family RQC PF09382.5 gi|15668317|ref|NP_247113.1| - 0.005 16.5 0.0 0.0085 15.7 0.0 1.5 1 0 0 1 1 1 1 RQC domain Zn_peptidase_2 PF04298.7 gi|15668317|ref|NP_247113.1| - 0.039 13.3 0.2 0.26 10.5 0.1 1.9 2 0 0 2 2 2 0 Putative neutral zinc metallopeptidase Phage_FRD3 PF05798.6 gi|15668317|ref|NP_247113.1| - 0.097 12.9 0.0 0.29 11.4 0.0 1.8 1 0 0 1 1 1 0 Bacteriophage FRD3 protein Fer4 PF00037.22 gi|15668318|ref|NP_247114.1| - 5.6e-13 47.8 15.2 2.4e-07 30.0 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668318|ref|NP_247114.1| - 6.2e-11 42.5 8.5 7.5e-11 42.2 5.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668318|ref|NP_247114.1| - 7.9e-10 38.3 10.2 5.9e-05 22.7 0.7 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668318|ref|NP_247114.1| - 1.2e-09 37.6 14.7 7.3e-05 22.4 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668318|ref|NP_247114.1| - 1.8e-08 34.0 12.6 7.1e-08 32.2 8.8 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668318|ref|NP_247114.1| - 2.7e-08 33.9 10.2 4.1e-08 33.3 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668318|ref|NP_247114.1| - 3.6e-08 32.8 15.1 7.3e-05 22.4 2.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668318|ref|NP_247114.1| - 3.6e-08 34.0 9.4 0.0011 19.6 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15668318|ref|NP_247114.1| - 0.00032 20.7 13.5 0.058 13.7 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668318|ref|NP_247114.1| - 0.00057 19.8 10.2 0.0035 17.3 7.2 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668318|ref|NP_247114.1| - 0.0011 19.2 11.1 0.019 15.3 7.7 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668318|ref|NP_247114.1| - 0.0014 19.1 9.2 0.034 14.6 0.3 2.4 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15668318|ref|NP_247114.1| - 0.0023 18.3 16.8 0.16 12.6 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|15668318|ref|NP_247114.1| - 0.0028 18.0 10.4 0.028 14.7 7.2 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15668318|ref|NP_247114.1| - 0.095 13.1 15.7 0.95 9.9 3.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668318|ref|NP_247114.1| - 0.28 11.1 5.8 3.2 7.6 4.1 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Arch_ATPase PF01637.13 gi|15668319|ref|NP_247115.1| - 1.2e-82 277.1 9.3 1.2e-82 277.1 6.5 1.9 2 0 0 2 2 2 1 Archaeal ATPase AAA_16 PF13191.1 gi|15668319|ref|NP_247115.1| - 2e-09 37.7 0.0 5.2e-09 36.3 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.1 gi|15668319|ref|NP_247115.1| - 2.6e-09 37.0 17.3 1.8e-05 24.6 0.3 3.6 1 1 3 4 4 4 2 AAA domain AAA_22 PF13401.1 gi|15668319|ref|NP_247115.1| - 5.7e-06 26.5 0.2 3.6e-05 23.9 0.0 2.3 1 1 1 2 2 2 1 AAA domain AAA_35 PF14516.1 gi|15668319|ref|NP_247115.1| - 1.7e-05 23.5 1.9 0.0038 15.9 0.2 2.8 2 1 0 2 2 2 2 AAA-like domain AAA PF00004.24 gi|15668319|ref|NP_247115.1| - 0.00014 22.0 1.1 0.018 15.2 0.0 3.0 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Zot PF05707.7 gi|15668319|ref|NP_247115.1| - 0.00069 19.1 0.3 0.054 12.9 0.0 2.6 2 1 0 2 2 2 1 Zonular occludens toxin (Zot) RNA12 PF10443.4 gi|15668319|ref|NP_247115.1| - 0.0017 16.9 0.0 0.75 8.2 0.0 2.2 1 1 1 2 2 2 2 RNA12 protein MobB PF03205.9 gi|15668319|ref|NP_247115.1| - 0.0053 16.4 0.0 0.013 15.1 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B TK PF00265.13 gi|15668319|ref|NP_247115.1| - 0.009 15.5 0.3 0.041 13.4 0.1 2.2 1 1 1 2 2 2 1 Thymidine kinase AAA_10 PF12846.2 gi|15668319|ref|NP_247115.1| - 0.0095 15.4 0.0 0.035 13.5 0.0 1.8 1 1 0 2 2 2 1 AAA-like domain cobW PF02492.14 gi|15668319|ref|NP_247115.1| - 0.025 14.0 0.0 0.048 13.1 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.18 gi|15668319|ref|NP_247115.1| - 0.082 12.8 0.1 0.34 10.8 0.1 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.1 gi|15668319|ref|NP_247115.1| - 3.4 7.9 10.6 3.4 7.9 1.3 3.2 1 1 1 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|15668319|ref|NP_247115.1| - 3.4 8.5 5.9 2.6 8.8 0.1 2.8 1 1 1 2 2 2 0 AAA domain TruB_N PF01509.13 gi|15668320|ref|NP_247116.1| - 1.8e-26 93.0 0.0 4.1e-23 82.1 0.0 3.2 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) DKCLD PF08068.7 gi|15668320|ref|NP_247116.1| - 2.1e-25 88.4 1.5 1.6e-24 85.5 0.3 2.7 3 0 0 3 3 3 1 DKCLD (NUC011) domain PUA PF01472.15 gi|15668320|ref|NP_247116.1| - 8.8e-19 67.0 5.7 2e-18 65.8 3.9 1.6 1 0 0 1 1 1 1 PUA domain ATPase_gene1 PF09527.5 gi|15668321|ref|NP_247117.1| - 8.2e-09 35.1 5.4 8.5e-09 35.0 3.7 1.0 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit (ATPase_gene1) UbiA PF01040.13 gi|15668321|ref|NP_247117.1| - 0.0047 16.1 0.7 0.0047 16.1 0.5 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family FUSC_2 PF13515.1 gi|15668321|ref|NP_247117.1| - 0.0053 16.6 0.6 0.0056 16.6 0.4 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein-like PMT PF02366.13 gi|15668321|ref|NP_247117.1| - 0.008 15.5 0.9 0.0092 15.3 0.6 1.0 1 0 0 1 1 1 1 Dolichyl-phosphate-mannose-protein mannosyltransferase MFS_1 PF07690.11 gi|15668321|ref|NP_247117.1| - 0.023 13.4 1.0 0.024 13.3 0.7 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily TauE PF01925.14 gi|15668321|ref|NP_247117.1| - 0.05 13.0 0.3 0.05 13.0 0.2 1.0 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE DUF4491 PF14898.1 gi|15668321|ref|NP_247117.1| - 0.054 13.6 2.2 0.06 13.4 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) UPF0154 PF03672.8 gi|15668321|ref|NP_247117.1| - 0.12 12.0 4.5 2.2 7.9 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) CoA_binding_3 PF13727.1 gi|15668321|ref|NP_247117.1| - 0.15 11.8 0.4 0.16 11.8 0.2 1.0 1 0 0 1 1 1 0 CoA-binding domain DUF1043 PF06295.7 gi|15668321|ref|NP_247117.1| - 0.19 11.4 1.3 0.28 10.8 0.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1043) DUF4181 PF13789.1 gi|15668321|ref|NP_247117.1| - 0.21 11.5 2.6 0.22 11.4 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF2909 PF11137.3 gi|15668321|ref|NP_247117.1| - 0.5 10.1 2.9 5.4 6.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2909) OppC_N PF12911.2 gi|15668321|ref|NP_247117.1| - 1.4 8.2 7.0 0.87 9.0 0.4 2.1 1 1 1 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C SdpI PF13630.1 gi|15668321|ref|NP_247117.1| - 2.4 7.9 5.5 2.9 7.6 3.8 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family P12 PF12669.2 gi|15668321|ref|NP_247117.1| - 6.1 7.1 5.4 0.78 9.9 0.2 1.9 2 0 0 2 2 2 0 Virus attachment protein p12 family V4R PF02830.13 gi|15668322|ref|NP_247118.1| - 2.9e-19 68.6 1.5 4.5e-19 68.0 1.0 1.3 1 0 0 1 1 1 1 V4R domain DUF2507 PF10702.4 gi|15668322|ref|NP_247118.1| - 3e-06 26.8 0.0 4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2507) ATC_hydrolase PF14196.1 gi|15668322|ref|NP_247118.1| - 0.0076 16.6 0.4 0.018 15.4 0.3 1.6 1 1 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase HTH_24 PF13412.1 gi|15668323|ref|NP_247119.1| - 1.4e-17 62.7 3.5 2.2e-17 62.1 1.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|15668323|ref|NP_247119.1| - 2e-16 59.2 0.4 3.5e-16 58.4 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|15668323|ref|NP_247119.1| - 3.4e-14 52.3 0.0 4.5e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 AsnC family HTH_11 PF08279.7 gi|15668323|ref|NP_247119.1| - 5.5e-07 29.1 0.2 5e-06 26.0 0.1 2.2 2 0 0 2 2 2 1 HTH domain HTH_20 PF12840.2 gi|15668323|ref|NP_247119.1| - 7.5e-07 28.8 0.0 6.4e-06 25.8 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|15668323|ref|NP_247119.1| - 9.1e-06 25.9 0.1 7.1e-05 23.0 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|15668323|ref|NP_247119.1| - 1e-05 25.1 0.0 3.6e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.1 gi|15668323|ref|NP_247119.1| - 1.3e-05 24.6 0.1 2.6e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.11 gi|15668323|ref|NP_247119.1| - 1.7e-05 23.9 0.3 3.7e-05 22.9 0.2 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.7 gi|15668323|ref|NP_247119.1| - 2.9e-05 23.4 0.2 9.2e-05 21.8 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 TrmB PF01978.14 gi|15668323|ref|NP_247119.1| - 5.4e-05 22.8 0.0 0.0016 18.1 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|15668323|ref|NP_247119.1| - 7e-05 22.4 0.0 0.00096 18.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_28 PF13518.1 gi|15668323|ref|NP_247119.1| - 0.0002 21.2 0.2 0.00046 20.1 0.1 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|15668323|ref|NP_247119.1| - 0.00025 20.5 0.3 0.00041 19.8 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|15668323|ref|NP_247119.1| - 0.0003 20.4 0.0 0.00071 19.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|15668323|ref|NP_247119.1| - 0.00032 20.2 0.0 0.00062 19.2 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GerE PF00196.14 gi|15668323|ref|NP_247119.1| - 0.00041 19.5 0.0 0.0007 18.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Fe_dep_repress PF01325.14 gi|15668323|ref|NP_247119.1| - 0.00049 19.9 0.0 0.33 10.9 0.0 2.3 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_ISL3 PF13542.1 gi|15668323|ref|NP_247119.1| - 0.00067 18.7 0.0 0.001 18.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 LexA_DNA_bind PF01726.11 gi|15668323|ref|NP_247119.1| - 0.0012 18.3 0.1 0.0039 16.7 0.0 1.8 2 0 0 2 2 2 1 LexA DNA binding domain HTH_DeoR PF08220.7 gi|15668323|ref|NP_247119.1| - 0.0018 17.7 0.3 0.0052 16.2 0.1 1.9 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain Mga PF05043.8 gi|15668323|ref|NP_247119.1| - 0.0022 18.2 0.0 0.0048 17.1 0.0 1.6 2 0 0 2 2 1 1 Mga helix-turn-helix domain HTH_34 PF13601.1 gi|15668323|ref|NP_247119.1| - 0.004 17.1 0.0 0.0078 16.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_29 PF13551.1 gi|15668323|ref|NP_247119.1| - 0.0048 17.0 0.0 0.011 15.9 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn helix PaaX PF07848.7 gi|15668323|ref|NP_247119.1| - 0.0052 16.7 0.3 0.014 15.3 0.1 1.7 2 0 0 2 2 2 1 PaaX-like protein GntR PF00392.16 gi|15668323|ref|NP_247119.1| - 0.021 14.2 0.1 0.057 12.8 0.0 1.8 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family DUF2089 PF09862.4 gi|15668323|ref|NP_247119.1| - 0.036 13.8 0.1 0.061 13.1 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) HrcA_DNA-bdg PF03444.10 gi|15668323|ref|NP_247119.1| - 0.046 13.1 0.2 0.13 11.7 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RPA_C PF08784.6 gi|15668323|ref|NP_247119.1| - 0.063 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HxlR PF01638.12 gi|15668323|ref|NP_247119.1| - 0.064 12.8 0.1 0.13 11.8 0.1 1.7 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_30 PF13556.1 gi|15668323|ref|NP_247119.1| - 0.07 12.7 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|15668323|ref|NP_247119.1| - 0.072 12.9 0.0 0.28 11.0 0.0 1.9 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_10 PF04967.7 gi|15668323|ref|NP_247119.1| - 0.13 11.8 0.0 0.36 10.4 0.0 1.7 2 0 0 2 2 2 0 HTH DNA binding domain FeoC PF09012.5 gi|15668323|ref|NP_247119.1| - 0.14 11.8 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_36 PF13730.1 gi|15668323|ref|NP_247119.1| - 0.17 12.0 0.6 0.38 10.9 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain CdhC PF03598.10 gi|15668324|ref|NP_247120.1| - 5.5e-194 644.3 1.0 8.9e-194 643.6 0.7 1.2 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit RasGAP PF00616.14 gi|15668324|ref|NP_247120.1| - 0.71 9.4 5.9 0.056 13.0 0.4 1.8 2 0 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase ThiS PF02597.15 gi|15668324|ref|NP_247120.1| - 7.9 6.9 10.8 5.5 7.4 0.9 4.3 3 1 1 4 4 4 0 ThiS family Prismane PF03063.15 gi|15668325|ref|NP_247121.1| - 4.3e-97 325.6 16.2 4.7e-85 285.9 0.2 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.2 gi|15668325|ref|NP_247121.1| - 2.3e-07 31.0 15.0 1.4e-06 28.5 5.9 3.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668325|ref|NP_247121.1| - 2.2e-06 27.3 10.6 2.2e-06 27.3 7.4 3.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668325|ref|NP_247121.1| - 4e-06 27.1 7.1 0.025 14.9 0.3 4.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668325|ref|NP_247121.1| - 8e-06 26.0 9.7 8e-06 26.0 6.7 3.7 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668325|ref|NP_247121.1| - 1.6e-05 25.1 14.9 0.012 15.9 0.2 4.1 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668325|ref|NP_247121.1| - 1.7e-05 24.7 20.4 4.2e-05 23.4 8.2 3.7 3 1 2 5 5 4 3 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668325|ref|NP_247121.1| - 0.00039 20.7 5.7 0.11 12.8 0.4 3.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|15668325|ref|NP_247121.1| - 0.00048 20.6 4.7 0.56 10.8 0.3 3.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|15668325|ref|NP_247121.1| - 0.00055 19.7 5.1 0.00055 19.7 3.5 3.8 4 0 0 4 4 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668325|ref|NP_247121.1| - 0.0016 18.1 1.9 0.0016 18.1 1.3 4.6 5 0 0 5 5 3 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668325|ref|NP_247121.1| - 0.003 17.3 1.4 0.003 17.3 1.0 5.0 5 0 0 5 5 3 1 4Fe-4S binding domain Fer4 PF00037.22 gi|15668325|ref|NP_247121.1| - 0.0054 16.2 2.6 0.0054 16.2 1.8 4.8 5 0 0 5 5 3 2 4Fe-4S binding domain Cyclin_C PF02984.14 gi|15668325|ref|NP_247121.1| - 0.22 11.4 0.0 25 4.8 0.0 2.4 2 0 0 2 2 2 0 Cyclin, C-terminal domain Fer4_16 PF13484.1 gi|15668325|ref|NP_247121.1| - 1.2 9.9 24.8 0.26 12.0 8.2 4.4 4 1 1 5 5 5 0 4Fe-4S double cluster binding domain CO_dh PF02552.11 gi|15668326|ref|NP_247122.1| - 7.4e-44 149.2 1.9 9.3e-44 148.9 1.3 1.1 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit RTTN_N PF14726.1 gi|15668326|ref|NP_247122.1| - 0.00063 20.2 0.2 0.0011 19.4 0.1 1.6 2 0 0 2 2 2 1 Rotatin, an armadillo repeat protein, centriole functioning TPP_enzyme_M PF00205.17 gi|15668326|ref|NP_247122.1| - 0.0021 17.8 0.0 0.005 16.5 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Glyco_trans_4_2 PF13477.1 gi|15668326|ref|NP_247122.1| - 0.062 13.1 0.6 0.33 10.7 0.2 1.8 1 1 1 2 2 2 0 Glycosyl transferase 4-like EF-hand_like PF09279.6 gi|15668326|ref|NP_247122.1| - 0.13 12.3 0.2 0.38 10.7 0.0 1.8 2 0 0 2 2 2 0 Phosphoinositide-specific phospholipase C, efhand-like Fer4_11 PF13247.1 gi|15668327|ref|NP_247123.1| - 1.7e-14 53.4 13.5 1.7e-14 53.4 9.4 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668327|ref|NP_247123.1| - 1.5e-12 46.5 41.7 2.7e-08 33.0 4.5 5.9 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668327|ref|NP_247123.1| - 4.9e-10 39.6 31.1 2.8e-05 24.3 10.1 3.8 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668327|ref|NP_247123.1| - 1.2e-09 37.5 41.6 2.2e-05 24.0 4.3 4.9 4 2 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668327|ref|NP_247123.1| - 7.5e-09 35.2 34.4 2.3e-05 24.1 10.2 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668327|ref|NP_247123.1| - 9.6e-08 32.1 31.7 0.00015 21.9 8.7 3.5 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668327|ref|NP_247123.1| - 1.9e-05 24.2 15.6 8.6e-05 22.2 3.5 4.6 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668327|ref|NP_247123.1| - 7.6e-05 22.9 38.9 0.035 14.6 1.5 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668327|ref|NP_247123.1| - 0.00025 21.6 31.4 0.57 10.9 0.9 4.6 4 1 1 5 5 5 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15668327|ref|NP_247123.1| - 0.00052 19.8 34.3 0.06 13.2 5.9 3.9 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668327|ref|NP_247123.1| - 0.0013 19.0 2.5 0.0013 19.0 1.7 4.2 5 1 1 6 6 5 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|15668327|ref|NP_247123.1| - 0.0018 18.4 1.8 0.0018 18.4 1.2 4.8 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668327|ref|NP_247123.1| - 0.0033 17.4 30.9 0.17 11.9 6.6 4.0 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668327|ref|NP_247123.1| - 0.084 13.2 2.6 0.084 13.2 1.8 4.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668327|ref|NP_247123.1| - 1.4 9.5 29.2 3.5 8.2 0.6 4.5 3 2 0 3 3 3 0 4Fe-4S single cluster domain CdhC PF03598.10 gi|15668328|ref|NP_247124.1| - 7e-197 653.8 1.6 8.6e-197 653.5 1.1 1.1 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DUF2098 PF09871.4 gi|15668329|ref|NP_247125.1| - 8.4e-28 96.1 0.9 9.5e-28 95.9 0.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) HAS-barrel PF09378.5 gi|15668329|ref|NP_247125.1| - 0.0021 17.9 4.8 0.0066 16.3 3.3 1.8 1 1 0 1 1 1 1 HAS barrel domain CarD_CdnL_TRCF PF02559.11 gi|15668329|ref|NP_247125.1| - 0.045 13.7 2.7 0.16 12.0 1.9 1.9 1 1 0 1 1 1 0 CarD-like/TRCF domain Reg_prop PF07494.6 gi|15668329|ref|NP_247125.1| - 0.11 12.6 0.1 0.21 11.7 0.1 1.6 1 0 0 1 1 1 0 Two component regulator propeller SelA PF03841.8 gi|15668330|ref|NP_247126.1| - 9.3e-07 27.8 0.1 1.5e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.15 gi|15668330|ref|NP_247126.1| - 2.4e-06 26.1 0.1 9.4e-06 24.1 0.0 1.9 1 1 1 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|15668330|ref|NP_247126.1| - 0.00034 19.4 0.1 0.0007 18.4 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|15668330|ref|NP_247126.1| - 0.00065 18.7 0.0 0.00094 18.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II SHMT PF00464.14 gi|15668330|ref|NP_247126.1| - 0.00087 17.7 0.0 0.0012 17.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.16 gi|15668330|ref|NP_247126.1| - 0.0041 16.2 0.1 0.017 14.2 0.1 1.7 1 1 1 2 2 2 1 Beta-eliminating lyase VirE1 PF12189.3 gi|15668330|ref|NP_247126.1| - 0.035 14.2 0.0 0.081 13.0 0.0 1.5 1 0 0 1 1 1 0 Single-strand DNA-binding protein CobA_CobO_BtuR PF02572.10 gi|15668330|ref|NP_247126.1| - 0.094 12.3 0.1 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Complex1_LYR_1 PF13232.1 gi|15668330|ref|NP_247126.1| - 0.099 12.8 0.3 0.23 11.6 0.2 1.6 1 0 0 1 1 1 0 Complex1_LYR-like DUF128 PF01995.11 gi|15668331|ref|NP_247127.1| - 3e-148 491.1 5.8 5.4e-76 254.6 0.3 2.1 2 0 0 2 2 2 2 Domain of unknown function DUF128 HTH_12 PF08461.5 gi|15668331|ref|NP_247127.1| - 1.3e-31 108.1 2.0 2.8e-31 107.0 1.4 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.1 gi|15668331|ref|NP_247127.1| - 0.035 14.1 2.4 0.19 11.7 0.1 2.9 3 0 0 3 3 3 0 HTH-like domain Ribosomal_S19e PF01090.14 gi|15668331|ref|NP_247127.1| - 0.058 12.8 0.1 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S19e GatB_N PF02934.10 gi|15668332|ref|NP_247128.1| - 1.1e-98 329.6 0.0 1.7e-98 329.0 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|15668332|ref|NP_247128.1| - 1.3e-48 164.5 5.3 1.3e-48 164.5 3.7 2.0 2 0 0 2 2 2 1 GatB domain His_kinase PF06580.8 gi|15668332|ref|NP_247128.1| - 0.11 12.4 0.0 0.38 10.6 0.0 2.0 1 0 0 1 1 1 0 Histidine kinase ALS_ss_C PF10369.4 gi|15668333|ref|NP_247129.1| - 4.7e-30 103.1 0.6 5.2e-29 99.7 0.0 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|15668333|ref|NP_247129.1| - 1.4e-21 76.0 0.2 2.8e-21 75.0 0.2 1.5 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|15668333|ref|NP_247129.1| - 1e-14 53.6 0.4 1.9e-14 52.7 0.2 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|15668333|ref|NP_247129.1| - 3.9e-05 23.9 1.6 6.2e-05 23.2 1.1 1.3 1 0 0 1 1 1 1 ACT domain Acylphosphatase PF00708.13 gi|15668333|ref|NP_247129.1| - 0.00041 20.3 0.3 0.025 14.6 0.2 2.2 2 0 0 2 2 2 1 Acylphosphatase Saccharop_dh_N PF04455.7 gi|15668333|ref|NP_247129.1| - 0.0073 16.4 0.1 0.011 15.7 0.1 1.4 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region NIL PF09383.5 gi|15668333|ref|NP_247129.1| - 0.069 12.7 0.0 3.1 7.4 0.0 2.5 2 1 0 2 2 2 0 NIL domain DUF2766 PF10964.3 gi|15668333|ref|NP_247129.1| - 0.33 10.8 1.9 0.61 10.0 0.4 1.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2766) Beta-Casp PF10996.3 gi|15668334|ref|NP_247130.1| - 7.9e-31 106.6 0.0 2.3e-30 105.1 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|15668334|ref|NP_247130.1| - 9.6e-21 74.3 0.0 1.7e-20 73.4 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|15668334|ref|NP_247130.1| - 1.5e-14 54.0 0.1 2.3e-14 53.3 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.7 gi|15668334|ref|NP_247130.1| - 3.4e-13 49.1 2.0 4e-13 48.9 0.0 2.3 3 0 0 3 3 3 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|15668334|ref|NP_247130.1| - 6.9e-07 29.1 0.0 2.1e-06 27.5 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lipl32 PF12103.3 gi|15668334|ref|NP_247130.1| - 0.0022 17.5 0.2 0.023 14.1 0.0 2.4 3 0 0 3 3 3 1 Surface lipoprotein of Spirochaetales order Robl_LC7 PF03259.12 gi|15668335|ref|NP_247131.1| - 4.2e-10 39.0 0.0 5.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF1310 PF07006.6 gi|15668335|ref|NP_247131.1| - 0.0028 17.1 3.7 0.034 13.6 0.3 2.8 2 1 1 3 3 3 1 Protein of unknown function (DUF1310) DUF2663 PF10864.3 gi|15668335|ref|NP_247131.1| - 0.023 14.8 0.2 0.044 13.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) HTH_CodY PF08222.6 gi|15668335|ref|NP_247131.1| - 0.19 11.0 1.3 1.4 8.2 0.0 2.3 2 0 0 2 2 2 0 CodY helix-turn-helix domain DUF3816 PF12822.2 gi|15668335|ref|NP_247131.1| - 6.8 6.5 7.0 7.3 6.4 4.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3816) DUF2226 PF09987.4 gi|15668336|ref|NP_247132.1| - 8.3e-139 461.7 46.0 9.9e-79 264.5 12.3 3.0 1 1 2 3 3 3 3 Uncharacterized protein conserved in archaea (DUF2226) CDT1 PF08839.6 gi|15668336|ref|NP_247132.1| - 3.5 7.5 7.3 1.3 8.9 0.4 2.7 2 1 1 3 3 3 0 DNA replication factor CDT1 like AIRC PF00731.15 gi|15668337|ref|NP_247133.1| - 6.3e-23 80.7 3.6 1.1e-22 79.9 2.5 1.4 1 0 0 1 1 1 1 AIR carboxylase NAD_kinase PF01513.16 gi|15668337|ref|NP_247133.1| - 0.054 12.2 0.1 0.068 11.9 0.0 1.3 1 0 0 1 1 1 0 ATP-NAD kinase tRNA_deacylase PF04414.7 gi|15668338|ref|NP_247134.1| - 4.6e-72 241.6 0.0 5.5e-72 241.3 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase MoCF_biosynth PF00994.19 gi|15668339|ref|NP_247135.1| - 5.6e-29 100.4 0.1 6.9e-29 100.1 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Acetate_kinase PF00871.12 gi|15668339|ref|NP_247135.1| - 0.051 12.1 0.1 0.058 11.9 0.1 1.2 1 0 0 1 1 1 0 Acetokinase family SPAM PF02090.10 gi|15668339|ref|NP_247135.1| - 0.15 12.0 0.5 0.84 9.6 0.1 1.9 1 1 1 2 2 2 0 Salmonella surface presentation of antigen gene type M protein CBFD_NFYB_HMF PF00808.18 gi|15668340|ref|NP_247136.1| - 3.7e-21 74.9 3.2 4e-21 74.8 2.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|15668340|ref|NP_247136.1| - 8.7e-17 61.0 1.3 9.7e-17 60.8 0.9 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.12 gi|15668340|ref|NP_247136.1| - 8.2e-08 32.0 0.8 8.8e-08 31.9 0.5 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.1 gi|15668340|ref|NP_247136.1| - 3.5e-07 30.3 0.2 3.8e-07 30.1 0.1 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S TFIID_20kDa PF03847.8 gi|15668340|ref|NP_247136.1| - 1.1e-05 25.6 0.3 1.3e-05 25.4 0.2 1.2 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.8 gi|15668340|ref|NP_247136.1| - 1.6e-05 24.5 0.1 1.9e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID-18kDa PF02269.11 gi|15668340|ref|NP_247136.1| - 0.00032 20.4 0.1 0.00035 20.3 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit TFIID-31kDa PF02291.10 gi|15668340|ref|NP_247136.1| - 0.00079 19.2 0.1 0.00086 19.0 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DUF1931 PF09123.6 gi|15668340|ref|NP_247136.1| - 0.0072 16.2 1.2 0.008 16.1 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) DUF22 PF01629.11 gi|15668340|ref|NP_247136.1| - 0.057 12.9 1.3 0.059 12.8 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF22 Methyltransf_5 PF01795.14 gi|15668340|ref|NP_247136.1| - 0.066 12.4 1.1 0.062 12.5 0.8 1.0 1 0 0 1 1 1 0 MraW methylase family DUF2540 PF10802.3 gi|15668340|ref|NP_247136.1| - 0.11 12.1 0.8 0.14 11.8 0.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2540) CENP-T PF15511.1 gi|15668340|ref|NP_247136.1| - 0.13 11.4 0.4 0.17 11.0 0.1 1.3 2 0 0 2 2 2 0 Centromere kinetochore component CENP-T CbiA PF01656.18 gi|15668341|ref|NP_247137.1| - 5.9e-41 140.0 1.0 7.3e-41 139.7 0.7 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15668341|ref|NP_247137.1| - 7.4e-17 61.7 0.0 1.3e-16 60.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|15668341|ref|NP_247137.1| - 1.2e-15 57.4 3.7 2e-14 53.4 2.6 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YhjQ PF06564.7 gi|15668341|ref|NP_247137.1| - 1e-14 54.5 0.0 1.7e-14 53.7 0.0 1.3 1 0 0 1 1 1 1 YhjQ protein MipZ PF09140.6 gi|15668341|ref|NP_247137.1| - 1.5e-11 43.8 0.5 3.9e-11 42.5 0.4 1.6 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|15668341|ref|NP_247137.1| - 1.1e-09 37.8 6.8 1.4e-08 34.1 3.8 2.7 2 1 0 2 2 2 1 Anion-transporting ATPase ParA PF10609.4 gi|15668341|ref|NP_247137.1| - 5.2e-07 29.4 0.2 5.3e-06 26.2 0.1 2.4 2 1 0 2 2 2 1 ParA/MinD ATPase like AAA_26 PF13500.1 gi|15668341|ref|NP_247137.1| - 2.2e-06 27.4 4.3 0.00035 20.2 0.0 2.6 2 1 1 3 3 3 2 AAA domain VirC1 PF07015.6 gi|15668341|ref|NP_247137.1| - 0.00026 20.1 2.1 0.0031 16.6 0.5 2.3 2 0 0 2 2 2 1 VirC1 protein SRP54 PF00448.17 gi|15668341|ref|NP_247137.1| - 0.00065 19.1 2.4 0.0024 17.3 0.8 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_25 PF13481.1 gi|15668341|ref|NP_247137.1| - 0.0021 17.4 0.0 0.0035 16.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15668341|ref|NP_247137.1| - 0.031 15.0 0.8 0.089 13.6 0.5 2.1 1 1 0 1 1 1 0 AAA domain FTHFS PF01268.14 gi|15668341|ref|NP_247137.1| - 0.041 11.8 0.3 0.054 11.4 0.2 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase APS_kinase PF01583.15 gi|15668341|ref|NP_247137.1| - 0.048 13.3 0.1 0.09 12.4 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_19 PF13245.1 gi|15668341|ref|NP_247137.1| - 0.14 11.9 1.5 0.33 10.7 0.8 1.7 2 0 0 2 2 1 0 Part of AAA domain MS_channel PF00924.13 gi|15668342|ref|NP_247138.1| - 9.5e-69 230.8 0.4 9.5e-69 230.8 0.3 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel TM_helix PF05552.7 gi|15668342|ref|NP_247138.1| - 3.3e-05 23.4 1.1 3.3e-05 23.4 0.7 3.2 3 0 0 3 3 3 1 Conserved TM helix RHH_3 PF12651.2 gi|15668342|ref|NP_247138.1| - 0.031 13.9 1.0 1.5 8.5 0.0 3.3 3 0 0 3 3 3 0 Ribbon-helix-helix domain DUF4100 PF13352.1 gi|15668342|ref|NP_247138.1| - 0.24 10.7 3.5 0.45 9.9 1.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4100) DNA_ligase_A_M PF01068.16 gi|15668343|ref|NP_247139.1| - 7e-63 211.6 3.4 1.3e-62 210.7 2.3 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|15668343|ref|NP_247139.1| - 4.1e-49 166.7 1.3 4.4e-48 163.4 0.7 2.2 1 1 1 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|15668343|ref|NP_247139.1| - 1.2e-15 57.6 0.0 4.5e-15 55.8 0.0 2.0 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region mRNA_cap_enzyme PF01331.14 gi|15668343|ref|NP_247139.1| - 0.00033 20.4 1.2 0.00072 19.2 0.8 1.6 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain DUF2071 PF09844.4 gi|15668343|ref|NP_247139.1| - 0.2 11.0 0.0 2.6 7.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (COG2071) PCMT PF01135.14 gi|15668344|ref|NP_247140.1| - 2.8e-86 288.3 0.0 3.4e-86 288.1 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.1 gi|15668344|ref|NP_247140.1| - 1.5e-10 40.8 0.0 2.1e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15668344|ref|NP_247140.1| - 1.3e-07 31.6 0.0 2.1e-07 30.9 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668344|ref|NP_247140.1| - 2.2e-07 31.4 0.0 3.6e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.12 gi|15668344|ref|NP_247140.1| - 1.1e-06 27.8 0.0 1.5e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Fibrillarin PF01269.12 gi|15668344|ref|NP_247140.1| - 0.00017 20.5 0.0 0.00022 20.2 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin CMAS PF02353.15 gi|15668344|ref|NP_247140.1| - 0.00026 20.1 0.0 0.00034 19.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.15 gi|15668344|ref|NP_247140.1| - 0.00085 18.4 0.0 0.0016 17.5 0.0 1.4 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 gi|15668344|ref|NP_247140.1| - 0.0068 15.4 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase GCD14 PF08704.5 gi|15668344|ref|NP_247140.1| - 0.0083 15.6 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_24 PF13578.1 gi|15668344|ref|NP_247140.1| - 0.021 15.6 0.1 0.056 14.2 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain MTS PF05175.9 gi|15668344|ref|NP_247140.1| - 0.043 13.2 0.0 0.095 12.0 0.0 1.5 2 0 0 2 2 2 0 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|15668344|ref|NP_247140.1| - 0.092 11.8 0.0 0.13 11.3 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|15668344|ref|NP_247140.1| - 0.15 11.7 0.0 0.26 10.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain TFX_C PF14601.1 gi|15668345|ref|NP_247141.1| - 1.9e-33 114.0 1.1 3.5e-33 113.2 0.8 1.4 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term Sigma70_r4 PF04545.11 gi|15668345|ref|NP_247141.1| - 3.1e-09 36.0 0.2 5.2e-09 35.2 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.17 gi|15668345|ref|NP_247141.1| - 1.2e-06 28.1 0.5 2.3e-06 27.3 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|15668345|ref|NP_247141.1| - 3.2e-06 27.0 2.0 4.5e-06 26.6 0.6 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|15668345|ref|NP_247141.1| - 0.00019 20.9 0.1 0.00042 19.8 0.0 1.7 1 1 0 1 1 1 1 Homeodomain-like domain HTH_37 PF13744.1 gi|15668345|ref|NP_247141.1| - 0.00032 20.4 2.7 0.00047 19.8 0.3 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain DUF2481 PF10654.4 gi|15668345|ref|NP_247141.1| - 0.00082 19.0 3.1 0.0011 18.6 0.2 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2481) GerE PF00196.14 gi|15668345|ref|NP_247141.1| - 0.00092 18.4 2.5 0.0011 18.2 0.7 2.0 2 1 0 2 2 2 1 Bacterial regulatory proteins, luxR family Trp_repressor PF01371.14 gi|15668345|ref|NP_247141.1| - 0.0016 18.2 0.2 0.0027 17.5 0.2 1.4 1 0 0 1 1 1 1 Trp repressor protein Pex14_N PF04695.8 gi|15668345|ref|NP_247141.1| - 0.003 17.5 0.2 0.0055 16.7 0.1 1.4 1 0 0 1 1 1 1 Peroxisomal membrane anchor protein (Pex14p) conserved region HTH_38 PF13936.1 gi|15668345|ref|NP_247141.1| - 0.0035 16.8 0.2 0.007 15.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|15668345|ref|NP_247141.1| - 0.0041 16.8 0.0 0.0085 15.8 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_28 PF13518.1 gi|15668345|ref|NP_247141.1| - 0.0043 17.0 0.1 0.013 15.4 0.1 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|15668345|ref|NP_247141.1| - 0.0051 16.2 0.1 0.0093 15.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 CPSase_L_D3 PF02787.14 gi|15668345|ref|NP_247141.1| - 0.0057 16.4 0.2 0.012 15.3 0.1 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KorB PF08535.5 gi|15668345|ref|NP_247141.1| - 0.0092 16.1 0.6 0.041 14.0 0.1 2.0 2 0 0 2 2 2 1 KorB domain HTH_31 PF13560.1 gi|15668345|ref|NP_247141.1| - 0.011 15.9 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|15668345|ref|NP_247141.1| - 0.013 15.5 0.1 0.024 14.7 0.1 1.6 1 1 0 1 1 1 0 Winged helix-turn helix HTH_24 PF13412.1 gi|15668345|ref|NP_247141.1| - 0.03 13.6 0.4 0.14 11.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|15668345|ref|NP_247141.1| - 0.037 13.6 0.0 0.058 13.0 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.7 gi|15668345|ref|NP_247141.1| - 0.042 13.4 0.1 0.12 12.0 0.1 1.8 1 0 0 1 1 1 0 HTH domain RepB PF07506.6 gi|15668345|ref|NP_247141.1| - 0.046 13.6 0.1 0.064 13.1 0.1 1.2 1 0 0 1 1 1 0 RepB plasmid partitioning protein MarR PF01047.17 gi|15668345|ref|NP_247141.1| - 0.048 13.3 0.1 0.11 12.2 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.10 gi|15668345|ref|NP_247141.1| - 0.098 12.5 0.0 0.34 10.8 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF4327 PF14217.1 gi|15668345|ref|NP_247141.1| - 0.11 12.2 0.1 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4327) Sigma70_ECF PF07638.6 gi|15668345|ref|NP_247141.1| - 0.13 11.8 0.1 0.3 10.7 0.0 1.6 2 0 0 2 2 2 0 ECF sigma factor eRF1_1 PF03463.10 gi|15668346|ref|NP_247142.1| - 6.3e-36 122.8 0.7 1.1e-35 122.0 0.5 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.10 gi|15668346|ref|NP_247142.1| - 1.6e-28 99.6 0.9 3.5e-28 98.5 0.6 1.6 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|15668346|ref|NP_247142.1| - 5.3e-27 94.3 2.5 6.6e-27 94.0 0.5 2.1 2 1 0 2 2 2 1 eRF1 domain 3 SpoU_sub_bind PF08032.7 gi|15668346|ref|NP_247142.1| - 0.0057 16.7 6.6 0.045 13.9 0.0 3.6 2 2 2 4 4 4 1 RNA 2'-O ribose methyltransferase substrate binding DUF4325 PF14213.1 gi|15668346|ref|NP_247142.1| - 0.035 13.7 0.1 0.14 11.8 0.1 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4325) DUF3750 PF12570.3 gi|15668346|ref|NP_247142.1| - 0.041 14.1 0.0 0.08 13.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3750) DUF211 PF02680.9 gi|15668346|ref|NP_247142.1| - 0.054 13.3 1.1 1.3 8.9 0.0 3.2 2 2 1 3 3 3 0 Uncharacterized ArCR, COG1888 Sigma70_r1_1 PF03979.9 gi|15668346|ref|NP_247142.1| - 1.4 8.8 5.9 9.4 6.2 1.3 3.4 2 1 0 2 2 2 0 Sigma-70 factor, region 1.1 DUF4362 PF14275.1 gi|15668346|ref|NP_247142.1| - 3.7 7.6 8.9 0.27 11.3 0.7 3.0 4 0 0 4 4 4 0 Domain of unknown function (DUF4362) Translin PF01997.11 gi|15668347|ref|NP_247143.1| - 9.8e-37 126.5 2.3 1.2e-36 126.1 1.6 1.1 1 0 0 1 1 1 1 Translin family Syntaxin_2 PF14523.1 gi|15668347|ref|NP_247143.1| - 0.0062 16.5 1.4 0.023 14.7 0.1 2.3 2 0 0 2 2 2 1 Syntaxin-like protein Cass2 PF14526.1 gi|15668347|ref|NP_247143.1| - 0.013 15.5 0.3 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 Integron-associated effector binding protein GSH_synth_ATP PF03917.12 gi|15668347|ref|NP_247143.1| - 0.018 13.6 0.3 0.034 12.7 0.2 1.5 1 1 0 1 1 1 0 Eukaryotic glutathione synthase, ATP binding domain FBP PF07299.6 gi|15668347|ref|NP_247143.1| - 0.13 11.5 1.5 0.16 11.2 0.2 1.7 2 1 0 2 2 2 0 Fibronectin-binding protein (FBP) Ribosomal_L3 PF00297.17 gi|15668348|ref|NP_247144.1| - 3.3e-81 272.5 0.6 3.8e-81 272.3 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.17 gi|15668349|ref|NP_247145.1| - 4e-45 153.5 0.3 4.7e-45 153.3 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.15 gi|15668350|ref|NP_247146.1| - 1.7e-24 85.6 3.2 2.3e-24 85.1 2.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L23 TusA PF01206.12 gi|15668350|ref|NP_247146.1| - 0.0086 15.6 0.3 0.011 15.3 0.2 1.3 1 1 0 1 1 1 1 Sulfurtransferase TusA Tap-RNA_bind PF09162.5 gi|15668350|ref|NP_247146.1| - 0.037 13.5 0.1 0.045 13.3 0.1 1.2 1 0 0 1 1 1 0 Tap, RNA-binding PA28_beta PF02252.13 gi|15668350|ref|NP_247146.1| - 0.055 12.9 0.7 0.064 12.7 0.5 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit Fae PF08714.6 gi|15668350|ref|NP_247146.1| - 0.065 12.9 0.1 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 Formaldehyde-activating enzyme (Fae) Ribosomal_L6 PF00347.18 gi|15668350|ref|NP_247146.1| - 0.28 11.7 1.7 0.76 10.3 0.1 1.9 1 1 1 2 2 2 0 Ribosomal protein L6 Ribosomal_L2_C PF03947.13 gi|15668351|ref|NP_247147.1| - 1.2e-45 154.5 1.8 1.7e-45 154.0 1.3 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|15668351|ref|NP_247147.1| - 8.3e-21 73.7 0.0 3e-20 71.9 0.0 2.0 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.16 gi|15668352|ref|NP_247148.1| - 1.1e-27 95.4 0.2 1.1e-27 95.4 0.1 1.6 2 0 0 2 2 2 1 Ribosomal protein S19 Ribosomal_S18 PF01084.15 gi|15668352|ref|NP_247148.1| - 0.078 12.8 0.7 0.15 11.9 0.5 1.6 1 0 0 1 1 1 0 Ribosomal protein S18 Lumazine_bd_2 PF12893.2 gi|15668353|ref|NP_247149.1| - 0.048 14.2 0.0 0.27 11.7 0.0 2.0 2 0 0 2 2 2 0 Putative lumazine-binding KAP_NTPase PF07693.9 gi|15668354|ref|NP_247150.1| - 1e-18 67.4 1.0 1.2e-18 67.1 0.7 1.0 1 0 0 1 1 1 1 KAP family P-loop domain AAA_16 PF13191.1 gi|15668354|ref|NP_247150.1| - 0.009 16.0 0.0 0.013 15.4 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AATF-Che1 PF13339.1 gi|15668354|ref|NP_247150.1| - 0.02 15.0 0.5 0.38 10.9 0.0 2.1 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor AAA PF00004.24 gi|15668354|ref|NP_247150.1| - 0.025 14.7 0.5 0.047 13.8 0.2 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) COG5 PF10392.4 gi|15668354|ref|NP_247150.1| - 0.053 13.4 0.4 0.57 10.1 0.1 2.1 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Arch_ATPase PF01637.13 gi|15668354|ref|NP_247150.1| - 0.068 12.8 3.3 0.16 11.5 2.3 1.7 1 1 0 1 1 1 0 Archaeal ATPase Spectrin PF00435.16 gi|15668354|ref|NP_247150.1| - 0.099 12.9 1.7 2.4 8.4 0.1 2.2 2 0 0 2 2 2 0 Spectrin repeat Spc24 PF08286.6 gi|15668354|ref|NP_247150.1| - 0.12 12.1 2.6 0.57 9.8 0.4 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 AAA_22 PF13401.1 gi|15668354|ref|NP_247150.1| - 0.12 12.4 0.7 0.21 11.7 0.2 1.6 1 1 1 2 2 2 0 AAA domain RBD-FIP PF09457.5 gi|15668354|ref|NP_247150.1| - 5.2 6.9 8.0 11 5.9 0.3 2.9 3 0 0 3 3 3 0 FIP domain Prefoldin_3 PF13758.1 gi|15668355|ref|NP_247151.1| - 0.059 13.1 0.0 0.068 12.9 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit DUF2789 PF10982.3 gi|15668355|ref|NP_247151.1| - 0.08 12.9 0.0 0.08 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2789) DUF2985 PF11204.3 gi|15668356|ref|NP_247152.1| - 0.86 9.3 6.7 0.33 10.7 2.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2985) FeoB_C PF07664.7 gi|15668356|ref|NP_247152.1| - 9.4 5.7 11.1 0.59 9.5 3.3 2.1 2 1 0 2 2 2 0 Ferrous iron transport protein B C terminus Metaviral_G PF09595.5 gi|15668357|ref|NP_247153.1| - 0.33 10.5 4.3 0.35 10.4 3.0 1.0 1 0 0 1 1 1 0 Metaviral_G glycoprotein DUF3671 PF12420.3 gi|15668357|ref|NP_247153.1| - 5.3 7.0 9.1 5.6 6.9 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function ArgJ PF01960.13 gi|15668358|ref|NP_247154.1| - 6.1e-146 485.7 9.4 7.4e-146 485.5 6.5 1.0 1 0 0 1 1 1 1 ArgJ family Bcl-2 PF00452.14 gi|15668358|ref|NP_247154.1| - 0.0044 17.1 0.2 0.037 14.1 0.0 2.4 2 1 1 3 3 3 1 Apoptosis regulator proteins, Bcl-2 family CGI-121 PF08617.5 gi|15668359|ref|NP_247155.1| - 4.9e-21 75.0 0.3 5.6e-21 74.8 0.2 1.0 1 0 0 1 1 1 1 Kinase binding protein CGI-121 CBS PF00571.23 gi|15668360|ref|NP_247156.1| - 1.1e-29 101.9 4.6 6e-17 61.1 0.2 2.5 2 0 0 2 2 2 2 CBS domain ParBc PF02195.13 gi|15668360|ref|NP_247156.1| - 2.9e-13 49.7 0.5 5e-12 45.7 0.1 2.4 2 0 0 2 2 2 1 ParB-like nuclease domain ParBc_2 PF08857.6 gi|15668360|ref|NP_247156.1| - 0.00024 20.9 0.1 0.0014 18.5 0.0 2.2 1 1 0 1 1 1 1 Putative ParB-like nuclease TusA PF01206.12 gi|15668360|ref|NP_247156.1| - 0.016 14.7 0.1 0.97 9.0 0.0 2.7 2 0 0 2 2 2 0 Sulfurtransferase TusA Acetyltransf_4 PF13420.1 gi|15668360|ref|NP_247156.1| - 0.03 14.2 0.1 0.11 12.4 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain RHD PF00554.17 gi|15668360|ref|NP_247156.1| - 0.34 10.6 2.3 4.2 7.0 1.0 2.7 1 1 1 2 2 2 0 Rel homology domain (RHD) DUF575 PF04746.7 gi|15668360|ref|NP_247156.1| - 8.2 6.5 7.6 52 3.9 0.1 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF575) Ribosomal_S13 PF00416.17 gi|15668361|ref|NP_247157.1| - 9e-33 112.9 0.1 1.1e-32 112.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.6 gi|15668361|ref|NP_247157.1| - 0.0039 15.7 0.0 0.0044 15.6 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) H2TH PF06831.9 gi|15668361|ref|NP_247157.1| - 0.052 13.3 0.0 0.073 12.8 0.0 1.2 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain HHH PF00633.18 gi|15668361|ref|NP_247157.1| - 0.072 12.8 0.0 0.24 11.2 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_6 PF14579.1 gi|15668361|ref|NP_247157.1| - 0.077 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif Cdd1 PF11731.3 gi|15668361|ref|NP_247157.1| - 0.1 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Pathogenicity locus S4 PF01479.20 gi|15668362|ref|NP_247158.1| - 2.9e-19 68.2 2.4 1.2e-17 63.0 0.1 2.4 2 0 0 2 2 2 2 S4 domain Ribosomal_S4 PF00163.14 gi|15668362|ref|NP_247158.1| - 0.019 15.3 7.1 0.035 14.4 3.6 2.2 1 1 1 2 2 2 0 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S11 PF00411.14 gi|15668363|ref|NP_247159.1| - 2.3e-37 127.5 0.3 2.9e-37 127.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 RNA_pol_A_bac PF01000.21 gi|15668364|ref|NP_247160.1| - 4.5e-25 87.9 0.0 1.2e-23 83.3 0.0 2.3 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|15668364|ref|NP_247160.1| - 3.8e-14 51.5 0.0 5.1e-14 51.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_L18e PF00828.14 gi|15668365|ref|NP_247161.1| - 8.1e-18 65.0 1.7 1.1e-17 64.5 1.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Ribosomal_L13 PF00572.13 gi|15668366|ref|NP_247162.1| - 1.6e-29 102.5 0.2 2e-29 102.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 Ribosomal_S9 PF00380.14 gi|15668367|ref|NP_247163.1| - 1.6e-31 109.0 1.6 1.8e-31 108.9 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 NIL PF09383.5 gi|15668367|ref|NP_247163.1| - 0.035 13.6 0.1 0.17 11.4 0.0 1.9 2 0 0 2 2 2 0 NIL domain RNA_pol_N PF01194.12 gi|15668368|ref|NP_247164.1| - 4e-28 97.2 0.6 4.8e-28 96.9 0.4 1.2 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.7 gi|15668368|ref|NP_247164.1| - 0.0004 20.4 0.1 0.00049 20.1 0.1 1.2 1 0 0 1 1 1 1 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) RNA_pol_Rpb6 PF01192.17 gi|15668369|ref|NP_247165.1| - 1.6e-12 46.9 0.0 1.8e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb6 Enolase_N PF03952.11 gi|15668370|ref|NP_247166.1| - 4.3e-08 33.1 0.0 1.2e-07 31.7 0.0 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain Fer4_6 PF12837.2 gi|15668371|ref|NP_247167.1| - 1.7e-10 40.3 15.8 1.6e-05 24.5 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668371|ref|NP_247167.1| - 4.6e-10 39.7 13.2 6.9e-10 39.1 9.2 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668371|ref|NP_247167.1| - 8.9e-10 37.7 17.4 5.1e-08 32.1 3.7 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668371|ref|NP_247167.1| - 7.2e-09 35.7 12.8 8.7e-09 35.5 8.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668371|ref|NP_247167.1| - 1.7e-07 30.9 10.0 2.3e-07 30.5 6.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668371|ref|NP_247167.1| - 4.6e-06 27.2 9.0 0.00088 19.9 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15668371|ref|NP_247167.1| - 1.1e-05 25.1 10.0 1.6e-05 24.6 6.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668371|ref|NP_247167.1| - 3.2e-05 23.9 14.9 0.0018 18.4 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668371|ref|NP_247167.1| - 4.5e-05 23.1 13.4 0.0031 17.3 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668371|ref|NP_247167.1| - 9.3e-05 22.6 7.7 0.004 17.4 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668371|ref|NP_247167.1| - 0.00049 20.0 14.2 0.0049 16.8 8.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668371|ref|NP_247167.1| - 0.00083 19.8 13.5 0.0035 17.8 1.2 2.1 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15668371|ref|NP_247167.1| - 0.00083 19.7 19.3 0.012 16.0 4.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668371|ref|NP_247167.1| - 0.0032 17.8 12.7 0.089 13.2 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668371|ref|NP_247167.1| - 0.009 15.8 6.3 0.012 15.5 4.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668371|ref|NP_247167.1| - 0.21 12.0 11.6 1.8 9.0 2.3 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain C1_1 PF00130.17 gi|15668371|ref|NP_247167.1| - 0.22 11.2 3.7 1.5 8.6 0.1 2.1 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-4CXXC_R1 PF10497.4 gi|15668371|ref|NP_247167.1| - 2.4 8.3 7.1 3.3 7.8 4.9 1.3 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 HupF_HypC PF01455.13 gi|15668372|ref|NP_247168.1| - 7.2e-23 80.3 0.1 8.4e-23 80.1 0.1 1.1 1 0 0 1 1 1 1 HupF/HypC family DUF3006 PF11213.3 gi|15668372|ref|NP_247168.1| - 0.0058 16.3 0.5 0.0067 16.1 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) Ribosomal_L2 PF00181.18 gi|15668372|ref|NP_247168.1| - 0.061 13.2 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 Ribosomal Proteins L2, RNA binding domain SNARE_assoc PF09335.6 gi|15668373|ref|NP_247169.1| - 1.2e-19 70.7 2.1 1.8e-19 70.1 1.4 1.2 1 0 0 1 1 1 1 SNARE associated Golgi protein Sm_multidrug_ex PF06695.6 gi|15668373|ref|NP_247169.1| - 0.011 15.9 0.6 0.037 14.1 0.4 2.0 1 1 0 1 1 1 0 Putative small multi-drug export protein DUF4133 PF13571.1 gi|15668373|ref|NP_247169.1| - 0.25 11.5 1.9 0.25 11.5 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4133) DUF89 PF01937.14 gi|15668374|ref|NP_247170.1| - 4.3e-63 213.2 5.4 4.8e-63 213.0 3.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 Imm3 PF14425.1 gi|15668374|ref|NP_247170.1| - 0.0039 17.1 6.6 0.8 9.6 1.6 2.9 2 1 0 2 2 2 2 Immunity protein Imm3 DUF445 PF04286.7 gi|15668374|ref|NP_247170.1| - 0.073 12.5 4.5 0.13 11.7 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF445) PDDEXK_1 PF12705.2 gi|15668374|ref|NP_247170.1| - 0.1 11.9 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily KR PF08659.5 gi|15668374|ref|NP_247170.1| - 0.15 11.7 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 KR domain AIRS_C PF02769.17 gi|15668375|ref|NP_247171.1| - 3.4e-26 92.0 0.0 6.5e-26 91.1 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|15668375|ref|NP_247171.1| - 1.9e-16 60.1 1.1 4.1e-16 58.9 0.8 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain GATase_7 PF13537.1 gi|15668376|ref|NP_247172.1| - 3.9e-25 87.9 0.0 6.6e-25 87.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|15668376|ref|NP_247172.1| - 5.3e-25 87.9 0.0 8.8e-25 87.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|15668376|ref|NP_247172.1| - 3.7e-23 81.8 0.0 1.3e-15 57.0 0.0 2.8 1 1 1 2 2 2 2 Glutamine amidotransferases class-II Pribosyltran PF00156.22 gi|15668376|ref|NP_247172.1| - 9.9e-16 57.5 0.3 3.7e-15 55.7 0.1 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|15668376|ref|NP_247172.1| - 3.8e-12 45.4 0.0 1.4e-11 43.6 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferases class-II Semialdhyde_dhC PF02774.13 gi|15668377|ref|NP_247173.1| - 3.9e-45 153.9 0.0 6.1e-45 153.3 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 gi|15668377|ref|NP_247173.1| - 2.7e-39 134.2 0.0 5.6e-39 133.1 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DXP_reductoisom PF02670.11 gi|15668377|ref|NP_247173.1| - 0.00018 22.0 0.0 0.00045 20.7 0.0 1.7 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DapB_N PF01113.15 gi|15668377|ref|NP_247173.1| - 0.00029 20.7 0.0 0.00059 19.7 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_C PF02800.15 gi|15668377|ref|NP_247173.1| - 0.0051 16.2 0.1 0.076 12.4 0.0 2.3 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFO_IDH_MocA PF01408.17 gi|15668377|ref|NP_247173.1| - 0.0088 16.5 0.0 0.021 15.3 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_10 PF13460.1 gi|15668377|ref|NP_247173.1| - 0.0096 15.9 0.0 0.029 14.3 0.0 1.8 1 1 0 1 1 1 1 NADH(P)-binding Saccharop_dh PF03435.13 gi|15668377|ref|NP_247173.1| - 0.017 14.1 0.0 0.024 13.6 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NAD_binding_3 PF03447.11 gi|15668377|ref|NP_247173.1| - 0.069 13.5 0.0 0.2 12.0 0.0 1.7 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain DUF371 PF04027.8 gi|15668378|ref|NP_247174.1| - 1.5e-58 196.1 2.6 1.7e-58 195.9 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) ETRAMP PF09716.5 gi|15668378|ref|NP_247174.1| - 0.049 13.5 2.7 4.2 7.3 0.1 2.1 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) LsmAD PF06741.8 gi|15668378|ref|NP_247174.1| - 0.073 13.1 0.2 0.93 9.6 0.0 2.2 2 0 0 2 2 2 0 LsmAD domain Acetone_carb_G PF08882.6 gi|15668378|ref|NP_247174.1| - 0.1 12.6 0.1 0.16 12.0 0.1 1.3 1 1 0 1 1 1 0 Acetone carboxylase gamma subunit Flavoprotein PF02441.14 gi|15668380|ref|NP_247176.1| - 2.7e-17 62.6 0.0 3.9e-17 62.1 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.22 gi|15668380|ref|NP_247176.1| - 4.5e-14 51.3 13.8 2.2e-07 30.1 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668380|ref|NP_247176.1| - 4.4e-11 42.1 10.4 1.2e-05 24.9 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668380|ref|NP_247176.1| - 1.4e-10 41.2 4.4 2.9e-05 24.2 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668380|ref|NP_247176.1| - 2.4e-10 40.0 10.4 5.7e-10 38.8 7.3 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668380|ref|NP_247176.1| - 2.2e-09 37.9 6.7 0.0001 22.9 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|15668380|ref|NP_247176.1| - 4.3e-09 36.6 9.0 1.2e-08 35.2 6.4 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668380|ref|NP_247176.1| - 9.1e-09 34.7 9.4 0.00015 21.5 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668380|ref|NP_247176.1| - 2.4e-08 33.8 1.0 0.00027 20.8 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668380|ref|NP_247176.1| - 2.3e-07 30.6 2.6 3.5e-07 30.0 1.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668380|ref|NP_247176.1| - 1.1e-06 28.3 10.1 2e-06 27.5 7.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668380|ref|NP_247176.1| - 4.5e-05 23.4 13.5 0.0042 17.3 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668380|ref|NP_247176.1| - 0.00018 21.8 16.8 0.028 14.9 3.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668380|ref|NP_247176.1| - 0.0013 19.0 11.2 0.011 16.0 1.5 2.4 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668380|ref|NP_247176.1| - 0.004 17.5 13.0 0.029 14.7 2.0 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668380|ref|NP_247176.1| - 0.0042 17.6 7.5 0.49 11.0 0.4 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|15668380|ref|NP_247176.1| - 0.01 16.1 5.4 0.55 10.6 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF137 PF02006.11 gi|15668381|ref|NP_247177.1| - 3.6e-77 257.7 4.3 4.7e-77 257.3 3.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 D5_N PF08706.6 gi|15668381|ref|NP_247177.1| - 0.012 15.6 1.5 0.02 14.9 0.2 1.8 2 0 0 2 2 2 0 D5 N terminal like MCM_N PF14551.1 gi|15668381|ref|NP_247177.1| - 0.1 13.0 0.2 0.22 12.0 0.1 1.6 1 1 0 1 1 1 0 MCM N-terminal domain ATP-grasp_2 PF08442.5 gi|15668382|ref|NP_247178.1| - 3.6e-71 238.7 3.9 3.6e-71 238.7 2.7 1.5 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.14 gi|15668382|ref|NP_247178.1| - 2.3e-12 46.7 1.1 3.5e-12 46.1 0.1 1.7 2 0 0 2 2 2 1 CoA-ligase ATP-grasp_5 PF13549.1 gi|15668382|ref|NP_247178.1| - 1.4e-11 44.0 0.3 3.8e-11 42.6 0.2 1.7 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|15668382|ref|NP_247178.1| - 1.4e-07 31.2 0.8 3.3e-07 30.0 0.6 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_4 PF13535.1 gi|15668382|ref|NP_247178.1| - 3.6e-06 26.8 0.2 1.5e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp PF02222.17 gi|15668382|ref|NP_247178.1| - 0.00099 18.5 0.4 0.0032 16.8 0.2 1.8 2 0 0 2 2 2 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|15668382|ref|NP_247178.1| - 0.003 16.8 0.2 0.0051 16.1 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain HeH PF12949.2 gi|15668382|ref|NP_247178.1| - 0.04 13.4 0.6 0.93 9.0 0.0 3.1 3 0 0 3 3 3 0 HeH/LEM domain TRP PF06011.7 gi|15668383|ref|NP_247179.1| - 0.64 8.5 9.4 0.71 8.3 6.5 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel RIC3 PF15361.1 gi|15668383|ref|NP_247179.1| - 1.9 8.7 4.4 4.2 7.5 3.0 1.6 1 1 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 Ndc1_Nup PF09531.5 gi|15668383|ref|NP_247179.1| - 2.7 6.3 6.3 3.6 5.9 4.4 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup UPF0197 PF05251.7 gi|15668383|ref|NP_247179.1| - 4.6 7.6 10.7 0.42 10.9 2.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0197) Epimerase PF01370.16 gi|15668384|ref|NP_247180.1| - 3e-66 223.2 0.1 3.7e-66 222.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|15668384|ref|NP_247180.1| - 9.8e-28 96.6 0.1 1.3e-27 96.2 0.1 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|15668384|ref|NP_247180.1| - 3.1e-19 68.8 0.0 3.1e-14 52.4 0.0 2.1 1 1 1 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.12 gi|15668384|ref|NP_247180.1| - 5.6e-17 61.5 0.0 6.1e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|15668384|ref|NP_247180.1| - 7.7e-17 61.1 0.2 9.8e-16 57.4 0.1 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|15668384|ref|NP_247180.1| - 1.3e-13 51.3 0.0 1.8e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|15668384|ref|NP_247180.1| - 5.1e-07 29.7 0.0 2e-06 27.8 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|15668384|ref|NP_247180.1| - 5.1e-05 22.6 0.4 0.00055 19.2 0.3 2.1 1 1 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|15668384|ref|NP_247180.1| - 0.00035 20.2 0.0 0.2 11.3 0.0 2.2 2 0 0 2 2 2 2 KR domain Epimerase_Csub PF13950.1 gi|15668384|ref|NP_247180.1| - 0.0017 18.2 0.0 0.0043 16.9 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit TrkA_N PF02254.13 gi|15668384|ref|NP_247180.1| - 0.0053 16.7 0.3 0.011 15.7 0.2 1.5 1 0 0 1 1 1 1 TrkA-N domain Alba PF01918.16 gi|15668385|ref|NP_247181.1| - 8e-18 63.8 3.2 1.2e-17 63.2 2.3 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.3 gi|15668385|ref|NP_247181.1| - 4.3e-05 23.1 0.5 5.1e-05 22.9 0.3 1.2 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P RNA_binding PF01877.12 gi|15668386|ref|NP_247182.1| - 5.4e-35 119.9 4.2 5.4e-35 119.9 2.9 1.5 2 0 0 2 2 2 1 RNA binding tRNA_lig_kinase PF08303.6 gi|15668386|ref|NP_247182.1| - 0.023 14.5 1.7 0.041 13.7 1.2 1.4 1 0 0 1 1 1 0 tRNA ligase kinase domain HypA PF01155.14 gi|15668387|ref|NP_247183.1| - 1.1e-31 108.7 1.7 1.3e-31 108.5 1.2 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Cys_rich_KTR PF14205.1 gi|15668387|ref|NP_247183.1| - 0.017 14.5 0.1 0.017 14.5 0.0 2.5 3 1 0 3 3 3 0 Cysteine-rich KTR FerB PF08150.7 gi|15668387|ref|NP_247183.1| - 0.088 12.8 0.0 4.8 7.3 0.0 2.2 2 0 0 2 2 2 0 FerB (NUC096) domain PTPlike_phytase PF14566.1 gi|15668388|ref|NP_247184.1| - 4.2e-06 26.8 0.0 7.3e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase PF00102.22 gi|15668388|ref|NP_247184.1| - 1.8e-05 24.2 0.0 3.2e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.15 gi|15668388|ref|NP_247184.1| - 9e-05 22.0 0.0 0.00013 21.5 0.0 1.4 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.1 gi|15668388|ref|NP_247184.1| - 0.032 14.4 0.0 0.043 14.0 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family ATP-synt_ab PF00006.20 gi|15668389|ref|NP_247185.1| - 2.9e-63 213.2 0.0 3.7e-63 212.8 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|15668389|ref|NP_247185.1| - 6.5e-18 65.2 0.5 1.2e-17 64.4 0.4 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|15668389|ref|NP_247185.1| - 1.1e-12 47.9 1.9 2.2e-12 47.0 1.3 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|15668389|ref|NP_247185.1| - 9e-06 25.5 0.8 3e-05 23.8 0.6 1.9 1 0 0 1 1 1 1 HAS barrel domain ATP-synt_ab PF00006.20 gi|15668390|ref|NP_247186.1| - 2.9e-95 317.8 0.0 5.9e-95 316.8 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|15668390|ref|NP_247186.1| - 5.3e-21 75.2 0.9 1.3e-20 73.9 0.7 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|15668390|ref|NP_247186.1| - 1.1e-15 57.5 3.1 1.1e-15 57.5 2.2 3.1 3 0 0 3 3 3 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.1 gi|15668390|ref|NP_247186.1| - 0.00016 21.3 2.2 0.0051 16.4 0.1 2.6 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.17 gi|15668390|ref|NP_247186.1| - 0.0054 16.7 0.2 1.4 9.0 0.0 2.8 2 0 0 2 2 2 1 Peptidase family M23 Biotin_lipoyl_2 PF13533.1 gi|15668390|ref|NP_247186.1| - 0.085 12.5 0.1 0.27 10.9 0.0 1.8 1 0 0 1 1 1 0 Biotin-lipoyl like AAA_22 PF13401.1 gi|15668390|ref|NP_247186.1| - 0.1 12.7 0.0 0.38 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATP-synt_F PF01990.12 gi|15668391|ref|NP_247187.1| - 5.2e-23 81.2 2.8 6e-23 81.0 2.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit DUF162 PF02589.10 gi|15668391|ref|NP_247187.1| - 0.0018 17.7 0.1 0.0021 17.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YkgG family COG1556 DUF1241 PF06840.6 gi|15668391|ref|NP_247187.1| - 0.14 11.4 1.7 0.18 11.0 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1241) GARS_N PF02844.10 gi|15668391|ref|NP_247187.1| - 0.19 12.2 0.9 0.85 10.1 0.3 1.9 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain vATP-synt_AC39 PF01992.11 gi|15668392|ref|NP_247188.1| - 1.9e-123 411.8 12.1 2.2e-123 411.6 8.4 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit DUF4240 PF14024.1 gi|15668392|ref|NP_247188.1| - 0.005 16.6 0.8 0.032 14.0 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF4240) DUF3926 PF13080.1 gi|15668392|ref|NP_247188.1| - 0.13 11.7 1.1 0.65 9.5 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3926) vATP-synt_E PF01991.13 gi|15668393|ref|NP_247189.1| - 5e-53 179.3 21.0 5.6e-53 179.1 14.5 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit ATP-synt_B PF00430.13 gi|15668393|ref|NP_247189.1| - 0.00076 19.2 22.1 0.0019 18.0 15.3 1.7 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) HrpE PF06188.7 gi|15668393|ref|NP_247189.1| - 0.046 13.4 9.6 0.2 11.3 6.6 1.9 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E HlyD PF00529.15 gi|15668393|ref|NP_247189.1| - 0.17 11.1 8.4 0.28 10.4 5.9 1.3 1 0 0 1 1 1 0 HlyD family secretion protein DivIVA PF05103.8 gi|15668393|ref|NP_247189.1| - 4.9 7.2 21.9 0.89 9.6 6.4 2.8 2 1 1 3 3 3 0 DivIVA protein V-ATPase_G PF03179.10 gi|15668393|ref|NP_247189.1| - 6.1 7.2 27.7 14 6.0 17.5 2.3 2 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit ATP-synt_C PF00137.16 gi|15668394|ref|NP_247190.1| - 1e-56 188.7 59.3 3.9e-20 71.5 9.4 3.1 3 0 0 3 3 3 3 ATP synthase subunit C DUF4006 PF13179.1 gi|15668394|ref|NP_247190.1| - 2 8.0 11.0 8.6 5.9 0.3 3.4 3 0 0 3 3 3 0 Family of unknown function (DUF4006) V_ATPase_I PF01496.14 gi|15668395|ref|NP_247191.1| - 2.7e-175 584.3 8.0 8.9e-175 582.6 5.5 1.7 1 1 0 1 1 1 1 V-type ATPase 116kDa subunit family DctM PF06808.7 gi|15668395|ref|NP_247191.1| - 0.00049 18.7 15.7 0.00049 18.7 10.9 1.8 2 0 0 2 2 2 1 DctM-like transporters Laminin_II PF06009.7 gi|15668395|ref|NP_247191.1| - 0.016 14.9 6.4 2.9 7.6 0.5 3.1 2 1 1 3 3 3 0 Laminin Domain II DUF948 PF06103.6 gi|15668395|ref|NP_247191.1| - 0.072 12.9 0.3 17 5.3 0.0 3.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4140 PF13600.1 gi|15668395|ref|NP_247191.1| - 0.65 10.4 2.1 2.2 8.7 0.3 2.3 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) FlaC_arch PF05377.6 gi|15668395|ref|NP_247191.1| - 5.1 7.0 12.4 0.33 10.8 1.0 3.6 4 1 0 4 4 4 0 Flagella accessory protein C (FlaC) V-SNARE PF05008.10 gi|15668395|ref|NP_247191.1| - 7.5 6.7 9.8 6.6 6.9 0.7 3.0 3 1 0 3 3 3 0 Vesicle transport v-SNARE protein N-terminus ATP-synt_B PF00430.13 gi|15668396|ref|NP_247192.1| - 0.0001 22.1 31.8 0.0004 20.2 21.9 1.8 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) HrpE PF06188.7 gi|15668396|ref|NP_247192.1| - 0.00019 21.2 9.3 0.00022 21.0 6.4 1.2 1 0 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E DivIVA PF05103.8 gi|15668396|ref|NP_247192.1| - 0.0077 16.2 23.9 0.26 11.3 16.2 2.0 1 1 1 2 2 2 2 DivIVA protein FBP PF07299.6 gi|15668396|ref|NP_247192.1| - 0.044 13.1 8.0 0.056 12.7 5.5 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein (FBP) RRF PF01765.14 gi|15668396|ref|NP_247192.1| - 0.079 12.4 20.1 0.1 12.0 13.9 1.2 1 0 0 1 1 1 0 Ribosome recycling factor GBP_C PF02841.9 gi|15668396|ref|NP_247192.1| - 0.13 11.4 22.0 0.15 11.2 15.2 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4497 PF14924.1 gi|15668396|ref|NP_247192.1| - 0.15 12.3 1.2 0.19 12.0 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) FdhE PF04216.7 gi|15668396|ref|NP_247192.1| - 0.2 11.3 4.2 0.22 11.2 2.9 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation Ribosomal_L22 PF00237.14 gi|15668396|ref|NP_247192.1| - 0.21 11.5 9.7 0.22 11.4 6.0 1.7 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e DUF3552 PF12072.3 gi|15668396|ref|NP_247192.1| - 0.34 10.1 32.2 0.46 9.6 8.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) HemX PF04375.9 gi|15668396|ref|NP_247192.1| - 0.42 9.1 5.8 0.47 9.0 4.0 1.1 1 0 0 1 1 1 0 HemX Effector_1 PF04518.7 gi|15668396|ref|NP_247192.1| - 0.56 9.1 8.9 0.62 8.9 6.1 1.0 1 0 0 1 1 1 0 Effector from type III secretion system DUF3492 PF11997.3 gi|15668396|ref|NP_247192.1| - 0.58 9.6 4.1 0.63 9.5 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) OmpH PF03938.9 gi|15668396|ref|NP_247192.1| - 0.84 9.5 20.0 1 9.2 13.9 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Phage_int_SAM_5 PF13102.1 gi|15668396|ref|NP_247192.1| - 0.85 9.6 10.5 1.2 9.1 7.3 1.2 1 0 0 1 1 1 0 Phage integrase SAM-like domain Cor1 PF04803.7 gi|15668396|ref|NP_247192.1| - 0.91 9.2 14.4 0.086 12.6 1.5 2.1 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region VSG_B PF13206.1 gi|15668396|ref|NP_247192.1| - 1.1 8.3 10.9 1.1 8.2 7.6 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain DUF2877 PF11392.3 gi|15668396|ref|NP_247192.1| - 1.1 9.4 4.7 1.4 9.1 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2877) Sua5_yciO_yrdC PF01300.13 gi|15668396|ref|NP_247192.1| - 1.1 8.4 4.4 1.7 7.8 3.1 1.4 1 1 0 1 1 1 0 Telomere recombination Prismane PF03063.15 gi|15668396|ref|NP_247192.1| - 1.7 6.9 8.9 1.8 6.8 6.2 1.0 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family DUF2252 PF10009.4 gi|15668396|ref|NP_247192.1| - 1.7 7.4 6.4 1.9 7.3 4.4 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) HSP70 PF00012.15 gi|15668396|ref|NP_247192.1| - 1.9 6.3 17.1 2.2 6.0 11.8 1.0 1 0 0 1 1 1 0 Hsp70 protein zf-CpG_bind_C PF12269.3 gi|15668396|ref|NP_247192.1| - 1.9 7.9 9.0 2.2 7.6 6.2 1.2 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF4359 PF14271.1 gi|15668396|ref|NP_247192.1| - 2 8.8 4.5 3.1 8.2 1.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4359) RGS PF00615.14 gi|15668396|ref|NP_247192.1| - 2 8.5 5.2 2.5 8.2 3.6 1.1 1 0 0 1 1 1 0 Regulator of G protein signaling domain MIF4G_like_2 PF09090.6 gi|15668396|ref|NP_247192.1| - 2 7.5 12.4 2.4 7.3 8.6 1.1 1 0 0 1 1 1 0 MIF4G like DUF883 PF05957.8 gi|15668396|ref|NP_247192.1| - 2.2 8.7 12.9 5.9 7.3 5.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) GlutR_dimer PF00745.15 gi|15668396|ref|NP_247192.1| - 2.3 8.1 18.5 0.1 12.5 6.6 2.1 1 1 1 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain vATP-synt_E PF01991.13 gi|15668396|ref|NP_247192.1| - 2.4 7.4 33.6 0.2 10.9 14.5 2.2 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit Prp19_bind PF06991.6 gi|15668396|ref|NP_247192.1| - 2.4 7.3 17.4 3 7.0 12.1 1.2 1 0 0 1 1 1 0 Splicing factor, Prp19-binding domain HAUS6_N PF14661.1 gi|15668396|ref|NP_247192.1| - 3.1 7.0 12.5 3.6 6.8 8.6 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DDE_Tnp_IS66 PF03050.9 gi|15668396|ref|NP_247192.1| - 3.5 6.7 6.5 4 6.5 4.5 1.1 1 0 0 1 1 1 0 Transposase IS66 family Lumazine_bd PF12870.2 gi|15668396|ref|NP_247192.1| - 4.7 7.2 16.2 6.5 6.8 10.8 1.6 1 1 0 1 1 1 0 Lumazine-binding domain DUF4559 PF15112.1 gi|15668396|ref|NP_247192.1| - 5.1 6.1 10.8 5.9 5.9 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Phage_min_cap2 PF06152.6 gi|15668396|ref|NP_247192.1| - 6.2 5.6 14.0 14 4.5 9.7 1.6 1 1 0 1 1 1 0 Phage minor capsid protein 2 Atg14 PF10186.4 gi|15668396|ref|NP_247192.1| - 6.6 5.5 14.0 7.9 5.3 9.7 1.1 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 TMPIT PF07851.8 gi|15668396|ref|NP_247192.1| - 7.3 5.5 10.1 9.1 5.2 7.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein Mitofilin PF09731.4 gi|15668396|ref|NP_247192.1| - 7.3 5.1 21.5 8.4 4.9 14.9 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein FIVAR PF07554.8 gi|15668396|ref|NP_247192.1| - 7.4 6.9 12.5 12 6.2 0.3 3.3 1 1 1 2 2 2 0 Uncharacterised Sugar-binding Domain SIMPL PF04402.9 gi|15668396|ref|NP_247192.1| - 7.5 6.3 15.9 15 5.3 9.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF541) Tho2 PF11262.3 gi|15668396|ref|NP_247192.1| - 7.8 5.4 9.1 11 4.9 6.3 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF2262 PF10020.4 gi|15668396|ref|NP_247192.1| - 8.7 6.5 16.8 12 6.0 11.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) ATP11 PF06644.6 gi|15668396|ref|NP_247192.1| - 8.8 5.7 13.9 9.6 5.6 9.6 1.0 1 0 0 1 1 1 0 ATP11 protein FixO PF02433.10 gi|15668396|ref|NP_247192.1| - 9.7 5.4 6.9 12 5.2 4.8 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO DUF531 PF04407.7 gi|15668397|ref|NP_247193.1| - 9.8e-76 253.4 0.0 1.1e-75 253.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF531) Phage_X PF05155.10 gi|15668397|ref|NP_247193.1| - 0.031 14.2 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 Phage X family DUF91 PF01939.11 gi|15668398|ref|NP_247194.1| - 2.1e-115 383.6 0.4 2.3e-115 383.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF91 Cas_Cas4 PF01930.12 gi|15668398|ref|NP_247194.1| - 0.00017 21.5 0.2 0.0022 17.9 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function DUF83 PDDEXK_4 PF14281.1 gi|15668398|ref|NP_247194.1| - 0.001 18.9 0.7 0.0014 18.5 0.2 1.5 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DUF1703 PF08011.6 gi|15668398|ref|NP_247194.1| - 0.0017 18.0 0.1 0.0047 16.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1703) Antitoxin-MazE PF04014.13 gi|15668398|ref|NP_247194.1| - 0.0048 16.5 0.7 0.92 9.3 0.0 2.5 1 1 1 2 2 2 2 Antidote-toxin recognition MazE HSDR_N_2 PF13588.1 gi|15668398|ref|NP_247194.1| - 0.043 13.6 0.0 0.098 12.4 0.0 1.6 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) HSDR_N PF04313.9 gi|15668398|ref|NP_247194.1| - 0.073 12.8 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Ham1p_like PF01725.11 gi|15668399|ref|NP_247195.1| - 3.6e-57 192.7 0.2 4.1e-57 192.6 0.2 1.0 1 0 0 1 1 1 1 Ham1 family DUF2713 PF10897.3 gi|15668399|ref|NP_247195.1| - 0.047 12.9 0.0 0.078 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2713) DUF4131 PF13567.1 gi|15668400|ref|NP_247196.1| - 0.11 11.8 0.2 0.2 11.0 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) UPF0542 PF15086.1 gi|15668400|ref|NP_247196.1| - 6.9 6.4 6.2 2 8.1 0.0 2.5 2 1 0 2 2 2 0 Uncharacterised protein family UPF0542 MscS_TM PF12794.2 gi|15668401|ref|NP_247197.1| - 0.014 14.0 3.3 0.017 13.7 2.3 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 ABC2_membrane_3 PF12698.2 gi|15668401|ref|NP_247197.1| - 0.9 8.5 23.3 1 8.2 16.2 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4064 PF13273.1 gi|15668401|ref|NP_247197.1| - 2 8.5 9.3 15 5.7 6.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TMEM247 PF15444.1 gi|15668401|ref|NP_247197.1| - 2.7 7.7 9.1 3.4 7.4 6.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 DUF1673 PF07895.6 gi|15668401|ref|NP_247197.1| - 3 7.3 18.8 2.6 7.5 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) Na_Ca_ex PF01699.19 gi|15668401|ref|NP_247197.1| - 3.3 7.2 11.6 4.5 6.8 8.1 1.2 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF443 PF04276.7 gi|15668401|ref|NP_247197.1| - 4.9 6.5 18.8 8.5 5.7 13.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF443) FA_desaturase PF00487.19 gi|15668401|ref|NP_247197.1| - 8 5.8 8.3 10 5.4 5.7 1.1 1 0 0 1 1 1 0 Fatty acid desaturase CitG PF01874.11 gi|15668402|ref|NP_247198.1| - 4.4e-70 236.0 0.0 5.1e-70 235.8 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase ATP-cone PF03477.11 gi|15668402|ref|NP_247198.1| - 0.12 12.8 0.6 0.77 10.2 0.1 2.3 2 0 0 2 2 2 0 ATP cone domain tRNA-synt_2b PF00587.20 gi|15668403|ref|NP_247199.1| - 7.5e-66 220.9 0.6 1.3e-65 220.1 0.4 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|15668403|ref|NP_247199.1| - 7.2e-26 89.9 0.5 2.4e-25 88.2 0.3 2.0 1 0 0 1 1 1 1 Anticodon binding domain E6 PF00518.12 gi|15668403|ref|NP_247199.1| - 0.049 13.9 0.6 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Early Protein (E6) zinc_ribbon_5 PF13719.1 gi|15668403|ref|NP_247199.1| - 0.26 10.9 1.6 11 5.6 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668403|ref|NP_247199.1| - 0.28 10.8 1.7 11 5.8 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain CpXC PF14353.1 gi|15668403|ref|NP_247199.1| - 0.29 11.0 2.7 0.68 9.9 0.3 2.4 2 0 0 2 2 2 0 CpXC protein HTH_5 PF01022.15 gi|15668404|ref|NP_247200.1| - 3.5e-16 58.6 0.2 8.3e-16 57.3 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|15668404|ref|NP_247200.1| - 3.1e-12 46.0 0.0 4.2e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|15668404|ref|NP_247200.1| - 1.8e-09 37.1 0.4 2.7e-09 36.6 0.3 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|15668404|ref|NP_247200.1| - 2.2e-06 26.9 0.8 5.3e-06 25.7 0.1 2.0 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|15668404|ref|NP_247200.1| - 1.1e-05 25.0 0.0 1.3e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|15668404|ref|NP_247200.1| - 1.2e-05 24.9 0.5 2.3e-05 24.0 0.4 1.4 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_11 PF08279.7 gi|15668404|ref|NP_247200.1| - 1.3e-05 24.7 0.3 2.1e-05 24.0 0.0 1.5 2 0 0 2 2 1 1 HTH domain MarR PF01047.17 gi|15668404|ref|NP_247200.1| - 2e-05 24.1 0.0 3.5e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|15668404|ref|NP_247200.1| - 6.5e-05 22.8 0.1 8.6e-05 22.5 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|15668404|ref|NP_247200.1| - 0.0014 18.2 0.0 0.0018 17.7 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.15 gi|15668404|ref|NP_247200.1| - 0.0026 17.8 0.0 0.0039 17.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator Mga PF05043.8 gi|15668404|ref|NP_247200.1| - 0.0035 17.6 0.1 0.0051 17.0 0.0 1.4 1 1 0 1 1 1 1 Mga helix-turn-helix domain IF2_N PF04760.10 gi|15668404|ref|NP_247200.1| - 0.0037 16.8 0.7 0.14 11.8 0.0 2.5 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region HxlR PF01638.12 gi|15668404|ref|NP_247200.1| - 0.0082 15.7 0.1 0.0087 15.6 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_41 PF14502.1 gi|15668404|ref|NP_247200.1| - 0.013 15.1 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_CodY PF08222.6 gi|15668404|ref|NP_247200.1| - 0.013 14.7 0.1 0.023 14.0 0.0 1.5 2 0 0 2 2 1 0 CodY helix-turn-helix domain HTH_27 PF13463.1 gi|15668404|ref|NP_247200.1| - 0.028 14.7 0.1 0.053 13.8 0.0 1.5 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_10 PF04967.7 gi|15668404|ref|NP_247200.1| - 0.029 13.9 0.0 0.05 13.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain GntR PF00392.16 gi|15668404|ref|NP_247200.1| - 0.031 13.6 0.0 0.046 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_40 PF14493.1 gi|15668404|ref|NP_247200.1| - 0.04 14.1 0.2 0.051 13.8 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sulfolobus_pRN PF05584.6 gi|15668404|ref|NP_247200.1| - 0.046 13.7 0.0 0.064 13.2 0.0 1.2 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HTH_28 PF13518.1 gi|15668404|ref|NP_247200.1| - 0.067 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|15668404|ref|NP_247200.1| - 0.083 12.8 0.1 0.25 11.3 0.0 1.8 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.1 gi|15668404|ref|NP_247200.1| - 0.13 12.4 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|15668404|ref|NP_247200.1| - 0.13 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_AsnC-type PF13404.1 gi|15668404|ref|NP_247200.1| - 0.18 11.4 0.4 0.39 10.2 0.1 1.8 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain IncA PF04156.9 gi|15668405|ref|NP_247201.1| - 0.00048 19.7 0.0 0.00057 19.5 0.0 1.1 1 0 0 1 1 1 1 IncA protein AgrB PF04647.10 gi|15668405|ref|NP_247201.1| - 0.0016 17.5 0.3 0.0018 17.4 0.2 1.1 1 0 0 1 1 1 1 Accessory gene regulator B DUF3671 PF12420.3 gi|15668405|ref|NP_247201.1| - 0.0022 17.9 3.3 0.0022 17.9 2.3 1.8 2 0 0 2 2 2 1 Protein of unknown function EcsB PF05975.7 gi|15668405|ref|NP_247201.1| - 0.0028 16.1 0.4 0.0031 16.0 0.3 1.1 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB SCFA_trans PF02667.9 gi|15668405|ref|NP_247201.1| - 0.0053 15.5 0.6 0.0053 15.5 0.4 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter OPA3 PF07047.7 gi|15668405|ref|NP_247201.1| - 0.0056 16.4 0.2 0.0065 16.2 0.1 1.1 1 0 0 1 1 1 1 Optic atrophy 3 protein (OPA3) Chordopox_A13L PF05961.6 gi|15668405|ref|NP_247201.1| - 0.0063 16.4 1.8 0.0086 15.9 1.3 1.2 1 0 0 1 1 1 1 Chordopoxvirus A13L protein ASFV_J13L PF05568.6 gi|15668405|ref|NP_247201.1| - 0.01 15.3 1.8 0.011 15.3 1.3 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF4330 PF14221.1 gi|15668405|ref|NP_247201.1| - 0.018 14.8 0.1 0.022 14.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) Choline_kin_N PF04428.9 gi|15668405|ref|NP_247201.1| - 0.019 14.4 0.8 0.029 13.8 0.6 1.3 1 0 0 1 1 1 0 Choline kinase N terminus ERG2_Sigma1R PF04622.7 gi|15668405|ref|NP_247201.1| - 0.023 13.9 0.3 0.025 13.8 0.2 1.1 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein DUF1312 PF07009.6 gi|15668405|ref|NP_247201.1| - 0.026 14.3 2.7 0.031 14.0 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1312) HN PF00423.14 gi|15668405|ref|NP_247201.1| - 0.033 12.4 2.0 0.035 12.3 1.4 1.0 1 0 0 1 1 1 0 Haemagglutinin-neuraminidase Peptidase_S49_N PF08496.5 gi|15668405|ref|NP_247201.1| - 0.039 13.7 0.5 0.049 13.4 0.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Snapin_Pallidin PF14712.1 gi|15668405|ref|NP_247201.1| - 0.043 14.1 0.4 0.05 13.9 0.3 1.1 1 0 0 1 1 1 0 Snapin/Pallidin Vps5 PF09325.5 gi|15668405|ref|NP_247201.1| - 0.043 13.0 1.4 0.05 12.8 1.0 1.0 1 0 0 1 1 1 0 Vps5 C terminal like Pex24p PF06398.6 gi|15668405|ref|NP_247201.1| - 0.045 12.5 0.1 0.055 12.2 0.1 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Baculo_44 PF04631.7 gi|15668405|ref|NP_247201.1| - 0.047 12.3 0.7 0.059 11.9 0.5 1.0 1 0 0 1 1 1 0 Baculovirus hypothetical protein Selenoprotein_S PF06936.6 gi|15668405|ref|NP_247201.1| - 0.058 12.9 0.2 0.068 12.7 0.2 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Pox_LP_H2 PF03356.10 gi|15668405|ref|NP_247201.1| - 0.059 13.0 0.2 0.065 12.9 0.2 1.0 1 0 0 1 1 1 0 Viral late protein H2 ATP-synt_8 PF00895.15 gi|15668405|ref|NP_247201.1| - 0.072 13.3 0.2 0.092 12.9 0.2 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DUF948 PF06103.6 gi|15668405|ref|NP_247201.1| - 0.084 12.7 0.5 0.11 12.3 0.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) 4HB_MCP_1 PF12729.2 gi|15668405|ref|NP_247201.1| - 0.088 12.1 3.6 0.14 11.4 2.5 1.4 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction OppC_N PF12911.2 gi|15668405|ref|NP_247201.1| - 0.099 12.0 1.6 0.16 11.3 1.1 1.3 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF4446 PF14584.1 gi|15668405|ref|NP_247201.1| - 0.15 11.9 0.6 0.23 11.2 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF2500 PF10694.4 gi|15668405|ref|NP_247201.1| - 0.16 11.9 0.6 0.18 11.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) DUF919 PF06034.6 gi|15668405|ref|NP_247201.1| - 0.22 11.1 3.8 0.29 10.8 2.6 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) 60KD_IMP PF02096.15 gi|15668405|ref|NP_247201.1| - 0.28 10.8 2.2 0.41 10.2 1.5 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein YajC PF02699.10 gi|15668405|ref|NP_247201.1| - 0.29 10.8 5.2 1.1 8.9 3.6 1.9 1 1 0 1 1 1 0 Preprotein translocase subunit DUF1664 PF07889.7 gi|15668405|ref|NP_247201.1| - 0.54 10.0 3.9 0.15 11.8 0.9 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Synaptobrevin PF00957.16 gi|15668405|ref|NP_247201.1| - 5.5 6.6 12.4 13 5.4 0.3 2.1 2 0 0 2 2 2 0 Synaptobrevin PmbA_TldD PF01523.11 gi|15668406|ref|NP_247202.1| - 6.4e-63 212.7 0.9 7.9e-63 212.4 0.6 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Enolase_C PF00113.17 gi|15668407|ref|NP_247203.1| - 7.6e-134 445.3 0.2 9.4e-134 445.0 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|15668407|ref|NP_247203.1| - 2.5e-59 198.9 0.5 4.6e-59 198.0 0.2 1.6 2 0 0 2 2 2 1 Enolase, N-terminal domain MR_MLE PF01188.16 gi|15668407|ref|NP_247203.1| - 4.8e-05 23.8 0.0 0.0001 22.7 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MAAL_C PF07476.6 gi|15668407|ref|NP_247203.1| - 0.00057 18.8 0.1 0.002 17.0 0.0 1.8 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus MR_MLE_C PF13378.1 gi|15668407|ref|NP_247203.1| - 0.0038 17.1 0.0 0.013 15.5 0.0 1.8 2 0 0 2 2 2 1 Enolase C-terminal domain-like DUF4013 PF13197.1 gi|15668408|ref|NP_247204.1| - 1.6e-23 82.8 41.8 1.6e-23 82.8 29.0 2.4 1 1 2 3 3 3 1 Protein of unknown function (DUF4013) Glycos_transf_3 PF00591.16 gi|15668409|ref|NP_247205.1| - 7e-103 343.4 1.5 1.8e-102 342.0 0.2 1.8 2 0 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|15668409|ref|NP_247205.1| - 1.3e-24 85.4 3.2 1.3e-24 85.4 2.2 1.8 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain DUF1402 PF07182.6 gi|15668409|ref|NP_247205.1| - 0.11 11.3 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1402) Cluap1 PF10234.4 gi|15668410|ref|NP_247206.1| - 0.012 14.8 3.5 0.012 14.8 1.2 1.7 1 1 0 1 1 1 0 Clusterin-associated protein-1 Annexin PF00191.15 gi|15668410|ref|NP_247206.1| - 0.049 13.5 1.1 0.098 12.5 0.7 1.6 1 1 0 1 1 1 0 Annexin Duffy_binding PF05424.6 gi|15668410|ref|NP_247206.1| - 0.066 13.0 1.5 0.076 12.8 1.1 1.2 1 0 0 1 1 1 0 Duffy binding domain HeLo PF14479.1 gi|15668410|ref|NP_247206.1| - 0.075 12.7 1.5 0.11 12.2 1.1 1.2 1 0 0 1 1 1 0 Prion-inhibition and propagation CENP-K PF11802.3 gi|15668410|ref|NP_247206.1| - 0.085 12.0 6.2 0.13 11.5 4.3 1.4 1 1 0 1 1 1 0 Centromere-associated protein K IncA PF04156.9 gi|15668410|ref|NP_247206.1| - 0.098 12.2 6.3 0.11 12.1 4.4 1.0 1 0 0 1 1 1 0 IncA protein Glyco_hydro_3 PF00933.16 gi|15668410|ref|NP_247206.1| - 0.11 11.4 0.1 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 N terminal domain DUF2309 PF10070.4 gi|15668410|ref|NP_247206.1| - 0.11 10.5 0.2 0.12 10.4 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) FlgN PF05130.7 gi|15668410|ref|NP_247206.1| - 0.11 12.6 1.6 0.19 12.0 1.1 1.4 1 1 0 1 1 1 0 FlgN protein MobC PF05713.6 gi|15668410|ref|NP_247206.1| - 0.14 12.1 0.9 1.8 8.6 0.6 2.4 1 1 0 1 1 1 0 Bacterial mobilisation protein (MobC) SpoIIIAH PF12685.2 gi|15668410|ref|NP_247206.1| - 0.23 10.9 3.4 0.24 10.8 2.3 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein TMPIT PF07851.8 gi|15668410|ref|NP_247206.1| - 0.4 9.7 4.8 0.42 9.6 3.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein Fib_alpha PF08702.5 gi|15668410|ref|NP_247206.1| - 0.59 10.2 4.4 3.6 7.6 2.9 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF3198 PF11433.3 gi|15668410|ref|NP_247206.1| - 0.67 9.8 7.0 0.18 11.7 2.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Borealin PF10512.4 gi|15668410|ref|NP_247206.1| - 0.69 9.8 2.8 1.1 9.1 0.3 2.0 2 0 0 2 2 2 0 Cell division cycle-associated protein 8 GvpK PF05121.7 gi|15668410|ref|NP_247206.1| - 0.7 9.7 3.8 4 7.3 0.3 2.2 1 1 1 2 2 2 0 Gas vesicle protein K DUF2312 PF10073.4 gi|15668410|ref|NP_247206.1| - 0.89 8.9 8.6 0.26 10.6 2.2 2.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Bromodomain PF00439.20 gi|15668410|ref|NP_247206.1| - 0.94 9.4 3.6 6 6.8 0.2 2.2 1 1 1 2 2 2 0 Bromodomain FlaC_arch PF05377.6 gi|15668410|ref|NP_247206.1| - 1.7 8.5 7.3 20 5.1 5.0 2.3 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Aldolase_2 PF10120.4 gi|15668411|ref|NP_247207.1| - 4.8e-58 195.2 0.0 7e-58 194.7 0.0 1.2 1 0 0 1 1 1 1 Putative aldolase Phos_pyr_kin PF08543.7 gi|15668411|ref|NP_247207.1| - 3.1e-56 190.3 0.0 2.9e-55 187.1 0.0 2.0 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase PGBA_N PF15436.1 gi|15668411|ref|NP_247207.1| - 0.0042 16.3 0.1 0.0078 15.5 0.0 1.4 1 0 0 1 1 1 1 Plasminogen-binding protein pgbA N-terminal Carb_kinase PF01256.12 gi|15668411|ref|NP_247207.1| - 0.011 15.0 0.0 0.018 14.2 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate kinase HK PF02110.10 gi|15668411|ref|NP_247207.1| - 0.16 11.1 0.0 0.7 9.0 0.0 1.8 2 0 0 2 2 2 0 Hydroxyethylthiazole kinase family tRNA-synt_1d PF00750.14 gi|15668412|ref|NP_247208.1| - 7.7e-56 189.4 2.2 1.4e-55 188.5 1.5 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|15668412|ref|NP_247208.1| - 6.3e-36 122.9 0.2 6.3e-36 122.9 0.2 3.3 3 0 0 3 3 3 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|15668412|ref|NP_247208.1| - 2.8e-19 69.4 4.1 2.9e-18 66.1 1.1 3.5 3 0 0 3 3 3 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1g PF09334.6 gi|15668412|ref|NP_247208.1| - 9.8e-08 31.0 1.3 0.014 14.0 0.0 3.7 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.13 gi|15668412|ref|NP_247208.1| - 1.1e-07 30.8 0.2 0.012 14.2 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 gi|15668412|ref|NP_247208.1| - 4e-05 22.9 1.1 7.9e-05 21.9 0.3 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.17 gi|15668412|ref|NP_247208.1| - 0.0034 15.4 1.1 0.0081 14.2 0.2 2.0 1 1 1 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.16 gi|15668412|ref|NP_247208.1| - 0.01 14.5 0.7 3.8 6.0 0.1 2.7 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain RuvA_C PF07499.8 gi|15668412|ref|NP_247208.1| - 0.034 14.3 0.2 0.58 10.3 0.0 2.9 4 0 0 4 4 4 0 RuvA, C-terminal domain IF2_N PF04760.10 gi|15668412|ref|NP_247208.1| - 3.9 7.2 13.6 22 4.8 0.0 4.8 4 0 0 4 4 4 0 Translation initiation factor IF-2, N-terminal region GATase PF00117.23 gi|15668413|ref|NP_247209.1| - 2.6e-54 183.5 0.0 3.2e-54 183.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|15668413|ref|NP_247209.1| - 7.7e-10 38.5 0.1 1.9e-09 37.2 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 DUF2431 PF10354.4 gi|15668414|ref|NP_247210.1| - 0.056 13.3 0.0 0.093 12.6 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF2431) CYTH PF01928.16 gi|15668415|ref|NP_247211.1| - 3.8e-41 140.7 5.4 4.3e-41 140.6 3.7 1.0 1 0 0 1 1 1 1 CYTH domain PUB PF09409.5 gi|15668415|ref|NP_247211.1| - 0.0048 16.6 2.6 0.34 10.6 0.0 2.8 3 0 0 3 3 3 1 PUB domain Cyclophil_like PF04126.8 gi|15668415|ref|NP_247211.1| - 0.0052 16.3 0.4 2.4 7.7 0.0 2.3 2 1 0 2 2 2 2 Cyclophilin-like UBA_3 PF09288.5 gi|15668415|ref|NP_247211.1| - 0.0097 15.4 13.2 0.035 13.7 0.5 4.1 3 2 2 5 5 5 1 Fungal ubiquitin-associated domain Glyoxalase_5 PF14696.1 gi|15668415|ref|NP_247211.1| - 0.015 15.2 0.9 0.22 11.4 0.0 2.2 1 1 1 2 2 2 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal PG_binding_2 PF08823.6 gi|15668415|ref|NP_247211.1| - 0.035 14.1 0.4 15 5.7 0.0 2.8 3 0 0 3 3 3 0 Putative peptidoglycan binding domain Adenine_glyco PF03352.8 gi|15668415|ref|NP_247211.1| - 0.037 13.5 0.5 6.1 6.3 0.0 2.3 2 0 0 2 2 2 0 Methyladenine glycosylase LAGLIDADG_1 PF00961.14 gi|15668415|ref|NP_247211.1| - 0.056 14.0 0.3 0.056 14.0 0.2 2.9 2 1 1 3 3 3 0 LAGLIDADG endonuclease Nro1 PF12753.2 gi|15668415|ref|NP_247211.1| - 0.11 11.4 3.1 0.26 10.1 0.3 2.0 2 0 0 2 2 2 0 Nuclear pore complex subunit Nro1 PGM_PMM_IV PF00408.15 gi|15668415|ref|NP_247211.1| - 0.4 10.7 4.7 0.27 11.2 0.1 2.5 2 1 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF4162 PF13732.1 gi|15668415|ref|NP_247211.1| - 0.82 10.2 5.8 0.7 10.4 1.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4162) NAC PF01849.13 gi|15668415|ref|NP_247211.1| - 0.96 9.0 5.5 0.37 10.3 0.5 2.7 3 0 0 3 3 2 0 NAC domain DUF3567 PF12091.3 gi|15668415|ref|NP_247211.1| - 1.8 8.5 4.9 0.65 10.0 0.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3567) Lipocalin PF00061.18 gi|15668415|ref|NP_247211.1| - 1.9 8.4 6.2 1.3 9.0 0.1 2.5 2 1 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Latarcin PF10279.4 gi|15668415|ref|NP_247211.1| - 3.3 7.9 8.2 14 6.0 3.2 2.8 2 1 0 2 2 2 0 Latarcin precursor Rrf2 PF02082.15 gi|15668416|ref|NP_247212.1| - 4.8e-09 36.2 0.8 9.7e-09 35.2 0.1 1.9 2 0 0 2 2 2 1 Transcriptional regulator HTH_20 PF12840.2 gi|15668416|ref|NP_247212.1| - 2.8e-06 27.0 0.0 5e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain ACT_4 PF13291.1 gi|15668416|ref|NP_247212.1| - 5.7e-06 26.5 2.4 6.8e-06 26.3 0.8 1.8 2 0 0 2 2 1 1 ACT domain ACT PF01842.20 gi|15668416|ref|NP_247212.1| - 6.5e-06 25.5 0.6 1.2e-05 24.6 0.4 1.3 1 0 0 1 1 1 1 ACT domain HrcA_DNA-bdg PF03444.10 gi|15668416|ref|NP_247212.1| - 4.4e-05 22.8 0.2 7.5e-05 22.0 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_5 PF01022.15 gi|15668416|ref|NP_247212.1| - 0.00015 21.3 0.3 0.00053 19.5 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|15668416|ref|NP_247212.1| - 0.00048 19.7 0.1 0.0012 18.4 0.1 1.7 1 0 0 1 1 1 1 HTH domain HTH_34 PF13601.1 gi|15668416|ref|NP_247212.1| - 0.00071 19.5 0.5 0.0087 16.0 0.1 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|15668416|ref|NP_247212.1| - 0.00088 19.5 0.4 0.002 18.3 0.1 1.7 2 0 0 2 2 1 1 Winged helix DNA-binding domain ACT_6 PF13740.1 gi|15668416|ref|NP_247212.1| - 0.0017 18.0 0.2 0.021 14.5 0.0 2.4 2 1 1 3 3 3 1 ACT domain IF2_N PF04760.10 gi|15668416|ref|NP_247212.1| - 0.0069 16.0 0.1 0.02 14.5 0.1 1.9 1 1 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region MarR_2 PF12802.2 gi|15668416|ref|NP_247212.1| - 0.0088 15.6 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|15668416|ref|NP_247212.1| - 0.028 14.2 0.6 0.028 14.2 0.4 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix MarR PF01047.17 gi|15668416|ref|NP_247212.1| - 0.044 13.5 0.0 0.086 12.5 0.0 1.5 1 0 0 1 1 1 0 MarR family Phage_rep_org_N PF09681.5 gi|15668416|ref|NP_247212.1| - 0.053 13.1 0.0 0.097 12.2 0.0 1.4 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_38 PF13936.1 gi|15668416|ref|NP_247212.1| - 0.055 13.0 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_12 PF08461.5 gi|15668416|ref|NP_247212.1| - 0.065 12.9 1.1 0.26 11.0 0.8 2.0 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain TrmB PF01978.14 gi|15668416|ref|NP_247212.1| - 0.12 12.1 0.1 0.34 10.6 0.1 1.8 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Antitoxin-MazE PF04014.13 gi|15668416|ref|NP_247212.1| - 0.5 10.1 3.6 7.8 6.3 0.2 3.2 2 1 1 3 3 3 0 Antidote-toxin recognition MazE SapB_1 PF05184.10 gi|15668416|ref|NP_247212.1| - 1.3 8.9 3.4 9.4 6.1 0.5 2.2 2 0 0 2 2 2 0 Saposin-like type B, region 1 Ribosomal_L41 PF05162.8 gi|15668417|ref|NP_247213.1| - 0.0005 19.6 18.7 0.00063 19.3 13.0 1.2 1 1 0 1 1 1 1 Ribosomal protein L41 DUF3263 PF11662.3 gi|15668417|ref|NP_247213.1| - 2.1 7.8 5.3 2.2 7.8 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) DUF1713 PF08213.6 gi|15668417|ref|NP_247213.1| - 5.3 6.7 13.3 5.2 6.7 9.2 1.1 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1713) Glu-tRNAGln PF02686.10 gi|15668418|ref|NP_247214.1| - 1.5e-08 34.2 1.2 1.8e-08 34.0 0.9 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit DHDPS PF00701.17 gi|15668419|ref|NP_247215.1| - 2.3e-100 334.9 0.3 2.5e-100 334.8 0.2 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family PEP_mutase PF13714.1 gi|15668419|ref|NP_247215.1| - 0.024 13.8 0.0 0.037 13.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase Ribosomal_S17e PF00833.13 gi|15668420|ref|NP_247216.1| - 7.9e-24 83.7 1.9 8.6e-24 83.6 1.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 DUF4326 PF14216.1 gi|15668420|ref|NP_247216.1| - 0.1 13.1 0.1 0.13 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4326) CM_2 PF01817.16 gi|15668421|ref|NP_247217.1| - 8.4e-24 83.4 3.8 1e-23 83.2 2.6 1.1 1 0 0 1 1 1 1 Chorismate mutase type II AKAP7_RIRII_bdg PF10470.4 gi|15668421|ref|NP_247217.1| - 0.00069 19.3 0.7 0.0012 18.6 0.5 1.5 1 0 0 1 1 1 1 PKA-RI-RII subunit binding domain of A-kinase anchor protein DUF313 PF03754.8 gi|15668421|ref|NP_247217.1| - 0.0048 16.8 1.5 0.0059 16.5 1.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF313) Imm2 PF14426.1 gi|15668421|ref|NP_247217.1| - 0.1 12.6 1.7 1.6 8.7 0.0 2.4 2 0 0 2 2 2 0 Immunity protein Imm2 DUF948 PF06103.6 gi|15668421|ref|NP_247217.1| - 0.16 11.8 1.3 0.23 11.3 0.3 1.6 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) GCOM2 PF15328.1 gi|15668421|ref|NP_247217.1| - 0.42 10.3 4.2 0.75 9.4 2.9 1.5 1 1 0 1 1 1 0 Putative GRINL1B complex locus protein 2 DivIC PF04977.10 gi|15668421|ref|NP_247217.1| - 1.4 8.4 9.5 0.04 13.4 1.3 2.0 2 0 0 2 2 2 0 Septum formation initiator PCNA_N PF00705.13 gi|15668422|ref|NP_247218.1| - 7.5e-23 80.4 0.8 7.5e-23 80.4 0.6 2.2 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|15668422|ref|NP_247218.1| - 1.4e-17 63.8 1.3 3.7e-14 52.7 0.1 2.3 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.11 gi|15668422|ref|NP_247218.1| - 1e-08 34.3 0.4 2e-05 23.4 0.2 2.2 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.8 gi|15668422|ref|NP_247218.1| - 4.8e-06 25.8 0.3 6.5e-06 25.4 0.2 1.2 1 0 0 1 1 1 1 Rad9 DNA_pol3_beta_3 PF02768.10 gi|15668422|ref|NP_247218.1| - 0.00055 19.4 2.9 0.00066 19.2 0.3 2.3 3 0 0 3 3 3 1 DNA polymerase III beta subunit, C-terminal domain Sld5 PF05916.6 gi|15668423|ref|NP_247219.1| - 0.031 14.5 0.7 0.059 13.6 0.5 1.5 1 1 0 1 1 1 0 GINS complex protein Ribosomal_L44 PF00935.14 gi|15668424|ref|NP_247220.1| - 2.9e-30 104.0 0.6 2.9e-30 104.0 0.4 1.4 1 1 0 1 1 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.15 gi|15668424|ref|NP_247220.1| - 0.0014 18.8 7.4 0.0024 18.0 2.7 2.3 2 0 0 2 2 2 1 Ribosomal protein L33 Elf1 PF05129.8 gi|15668424|ref|NP_247220.1| - 0.0072 15.9 1.8 0.46 10.2 0.1 2.1 2 0 0 2 2 2 1 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.1 gi|15668424|ref|NP_247220.1| - 0.023 13.9 1.1 2.1 7.6 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_jaz PF12171.3 gi|15668424|ref|NP_247220.1| - 0.048 13.8 3.5 2.2 8.5 0.6 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zinc_ribbon_2 PF13240.1 gi|15668424|ref|NP_247220.1| - 0.065 12.7 4.8 4.7 6.8 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 gi|15668424|ref|NP_247220.1| - 0.085 12.5 1.2 10 5.8 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Lar_restr_allev PF14354.1 gi|15668424|ref|NP_247220.1| - 0.096 12.9 0.3 0.18 12.1 0.2 1.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar Nudix_N_2 PF14803.1 gi|15668424|ref|NP_247220.1| - 0.22 11.2 2.3 5.5 6.7 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal TFIIS_C PF01096.13 gi|15668424|ref|NP_247220.1| - 0.48 10.1 6.9 4.2 7.0 0.2 3.0 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-Di19 PF05605.7 gi|15668424|ref|NP_247220.1| - 0.87 9.7 4.0 2.5 8.2 0.2 2.1 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2 PF00096.21 gi|15668424|ref|NP_247220.1| - 0.94 9.9 5.2 13 6.3 0.3 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type DZR PF12773.2 gi|15668424|ref|NP_247220.1| - 1.4 8.8 6.0 6.3 6.6 4.2 1.9 1 1 0 1 1 1 0 Double zinc ribbon Tnp_zf-ribbon_2 PF13842.1 gi|15668424|ref|NP_247220.1| - 4.6 7.7 7.3 14 6.2 0.5 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-ISL3 PF14690.1 gi|15668424|ref|NP_247220.1| - 5.8 7.0 10.3 6.4 6.8 1.6 2.7 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|15668424|ref|NP_247220.1| - 6 6.7 6.8 13 5.7 0.2 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|15668425|ref|NP_247221.1| - 1.3e-28 98.2 1.8 1.4e-28 98.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-ribbon_3 PF13248.1 gi|15668425|ref|NP_247221.1| - 0.003 16.7 1.5 1 8.6 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15668425|ref|NP_247221.1| - 0.0092 15.5 0.9 0.68 9.5 0.0 2.4 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668425|ref|NP_247221.1| - 0.0095 15.6 0.9 0.83 9.3 0.1 2.4 2 0 0 2 2 2 1 zinc-ribbon domain TFIIS_C PF01096.13 gi|15668425|ref|NP_247221.1| - 0.019 14.6 4.2 0.51 10.0 0.2 2.2 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) zf-C4_Topoisom PF01396.14 gi|15668425|ref|NP_247221.1| - 0.021 14.3 4.9 0.49 9.9 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS1595 PF12760.2 gi|15668425|ref|NP_247221.1| - 0.039 13.7 0.3 0.059 13.1 0.2 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.2 gi|15668425|ref|NP_247221.1| - 0.042 13.6 0.3 0.06 13.1 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS91 PF14319.1 gi|15668425|ref|NP_247221.1| - 0.046 13.2 0.1 0.05 13.1 0.1 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain DUF2614 PF11023.3 gi|15668425|ref|NP_247221.1| - 0.051 13.3 0.2 0.058 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2614) DUF3797 PF12677.2 gi|15668425|ref|NP_247221.1| - 0.065 12.8 0.5 0.065 12.8 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-BED PF02892.10 gi|15668425|ref|NP_247221.1| - 0.066 12.9 0.2 0.31 10.8 0.0 1.9 2 0 0 2 2 2 0 BED zinc finger TF_Zn_Ribbon PF08271.7 gi|15668425|ref|NP_247221.1| - 0.1 11.9 3.0 0.17 11.2 2.1 1.4 1 1 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1 PF03811.8 gi|15668425|ref|NP_247221.1| - 0.11 11.9 1.0 0.35 10.3 0.0 2.0 2 0 0 2 2 2 0 InsA N-terminal domain PADR1 PF08063.7 gi|15668425|ref|NP_247221.1| - 0.14 11.5 1.9 0.18 11.2 0.4 1.7 1 1 1 2 2 2 0 PADR1 (NUC008) domain Zn-ribbon_8 PF09723.5 gi|15668425|ref|NP_247221.1| - 0.17 11.8 2.8 1.2 9.1 2.2 1.9 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2HC5 PF06221.8 gi|15668425|ref|NP_247221.1| - 0.68 9.7 3.2 1.1 9.0 0.1 2.0 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zinc_ribbon_2 PF13240.1 gi|15668425|ref|NP_247221.1| - 1.2 8.6 4.2 8.3 6.0 2.7 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DUF329 PF03884.9 gi|15668425|ref|NP_247221.1| - 1.2 8.7 4.2 5.1 6.7 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF329) DNA_ligase_ZBD PF03119.11 gi|15668425|ref|NP_247221.1| - 1.4 8.6 5.6 6.6 6.5 0.9 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain RNA_POL_M_15KD PF02150.11 gi|15668425|ref|NP_247221.1| - 2.1 8.1 6.2 26 4.6 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DUF1610 PF07754.6 gi|15668425|ref|NP_247221.1| - 9.3 6.4 8.0 2.5 8.2 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Fer4_10 PF13237.1 gi|15668426|ref|NP_247222.1| - 2.6e-05 23.9 14.5 7.5e-05 22.4 10.1 1.7 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668426|ref|NP_247222.1| - 3.4e-05 24.1 8.5 0.00089 19.5 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668426|ref|NP_247222.1| - 4.9e-05 22.7 2.7 4.9e-05 22.7 1.9 2.9 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668426|ref|NP_247222.1| - 0.00033 20.3 2.3 0.00033 20.3 1.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668426|ref|NP_247222.1| - 0.00079 19.3 4.7 0.011 15.7 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668426|ref|NP_247222.1| - 0.0019 17.9 2.9 0.0019 17.9 2.0 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668426|ref|NP_247222.1| - 0.0021 18.2 28.2 0.0082 16.3 2.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668426|ref|NP_247222.1| - 0.0072 16.5 3.3 0.0072 16.5 2.3 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668426|ref|NP_247222.1| - 0.02 15.3 0.1 0.02 15.3 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668426|ref|NP_247222.1| - 0.03 15.0 2.1 0.03 15.0 1.5 2.5 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15668426|ref|NP_247222.1| - 0.049 13.4 15.3 0.14 12.0 10.7 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668426|ref|NP_247222.1| - 2.9 8.3 16.9 0.18 12.1 2.5 2.7 1 1 3 4 4 4 0 4Fe-4S dicluster domain OMPdecase PF00215.19 gi|15668427|ref|NP_247223.1| - 1.1e-46 159.0 2.4 1.3e-46 158.8 1.7 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Trp_syntA PF00290.15 gi|15668427|ref|NP_247223.1| - 0.0045 15.5 5.8 0.3 9.5 1.4 3.0 2 2 2 4 4 4 2 Tryptophan synthase alpha chain Lipocalin_7 PF14651.1 gi|15668427|ref|NP_247223.1| - 0.013 15.2 0.0 0.026 14.2 0.0 1.6 1 1 0 1 1 1 0 Lipocalin / cytosolic fatty-acid binding protein family SSXT PF05030.7 gi|15668427|ref|NP_247223.1| - 0.033 13.7 0.1 0.075 12.6 0.1 1.6 1 0 0 1 1 1 0 SSXT protein (N-terminal region) DUF2325 PF10087.4 gi|15668427|ref|NP_247223.1| - 0.044 13.6 1.5 0.1 12.4 0.3 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) GDPD PF03009.12 gi|15668427|ref|NP_247223.1| - 0.072 12.5 0.2 0.17 11.3 0.1 1.7 1 1 1 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family DUF552 PF04472.7 gi|15668427|ref|NP_247223.1| - 0.63 9.9 5.2 15 5.5 0.1 3.3 4 0 0 4 4 4 0 Protein of unknown function (DUF552) PTS_IIB PF02302.12 gi|15668427|ref|NP_247223.1| - 0.96 9.9 8.0 0.75 10.3 0.2 2.5 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit HycI PF01750.13 gi|15668428|ref|NP_247224.1| - 5e-38 129.5 1.2 5.9e-38 129.3 0.8 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease ThiF PF00899.16 gi|15668428|ref|NP_247224.1| - 0.1 12.4 0.7 3.6 7.3 0.0 2.5 1 1 1 2 2 2 0 ThiF family MspA PF09203.6 gi|15668428|ref|NP_247224.1| - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 MspA Rad51 PF08423.6 gi|15668429|ref|NP_247225.1| - 4.1e-24 84.8 0.3 5e-24 84.5 0.2 1.1 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.1 gi|15668429|ref|NP_247225.1| - 1.3e-08 34.5 0.0 2.9e-08 33.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain RecA PF00154.16 gi|15668429|ref|NP_247225.1| - 2.2e-08 33.5 0.4 2.8e-08 33.2 0.3 1.0 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.1 gi|15668429|ref|NP_247225.1| - 5.6e-08 32.6 0.1 7.7e-08 32.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain Zot PF05707.7 gi|15668429|ref|NP_247225.1| - 3.4e-07 29.9 0.1 4.9e-07 29.4 0.1 1.3 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) KaiC PF06745.8 gi|15668429|ref|NP_247225.1| - 5e-07 29.0 3.4 3.8e-06 26.1 2.4 2.3 1 1 0 1 1 1 1 KaiC AAA_18 PF13238.1 gi|15668429|ref|NP_247225.1| - 0.00083 19.6 0.9 0.0032 17.7 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|15668429|ref|NP_247225.1| - 0.0014 18.8 3.3 0.0067 16.6 2.3 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|15668429|ref|NP_247225.1| - 0.0032 17.1 1.1 0.0052 16.5 0.8 1.3 1 1 0 1 1 1 1 Archaeal ATPase IstB_IS21 PF01695.12 gi|15668429|ref|NP_247225.1| - 0.034 13.5 0.1 0.12 11.8 0.0 1.8 1 1 1 2 2 2 0 IstB-like ATP binding protein AAA_14 PF13173.1 gi|15668429|ref|NP_247225.1| - 0.064 13.1 4.2 0.67 9.8 2.9 2.0 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.1 gi|15668429|ref|NP_247225.1| - 0.085 12.4 0.0 0.086 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15668429|ref|NP_247225.1| - 0.091 13.5 1.1 0.55 11.0 0.7 2.4 1 1 0 1 1 1 0 AAA domain RNA_pol_Rpb1_5 PF04998.12 gi|15668429|ref|NP_247225.1| - 0.12 11.6 0.8 0.15 11.3 0.6 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 AAA_22 PF13401.1 gi|15668429|ref|NP_247225.1| - 0.18 11.9 4.4 3.8 7.6 3.1 2.3 1 1 0 1 1 1 0 AAA domain ComA PF02679.10 gi|15668430|ref|NP_247226.1| - 3.7e-99 330.6 0.1 4.1e-99 330.5 0.1 1.0 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) PDZ PF00595.19 gi|15668430|ref|NP_247226.1| - 0.089 12.9 0.1 0.25 11.5 0.0 1.8 2 0 0 2 2 2 0 PDZ domain (Also known as DHR or GLGF) Isochorismatase PF00857.15 gi|15668430|ref|NP_247226.1| - 0.1 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Isochorismatase family Radical_SAM PF04055.16 gi|15668431|ref|NP_247229.1| - 1.8e-21 77.0 0.9 2e-20 73.6 0.2 2.6 2 1 0 2 2 2 1 Radical SAM superfamily Wyosine_form PF08608.7 gi|15668431|ref|NP_247229.1| - 1.4e-19 69.9 0.0 3.9e-19 68.5 0.0 1.8 1 0 0 1 1 1 1 Wyosine base formation HAD_2 PF13419.1 gi|15668431|ref|NP_247229.1| - 0.077 13.2 0.0 0.2 11.8 0.0 1.7 1 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Mur_ligase_M PF08245.7 gi|15668432|ref|NP_247230.1| - 1e-10 41.9 0.2 2.6e-10 40.6 0.2 1.7 1 1 0 1 1 1 1 Mur ligase middle domain Reovirus_L2 PF06016.6 gi|15668433|ref|NP_247231.1| - 0.043 10.8 0.1 0.051 10.5 0.1 1.1 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) DUF2659 PF10858.3 gi|15668433|ref|NP_247231.1| - 0.81 9.0 13.8 0.37 10.1 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2659) Peptidase_S24 PF00717.18 gi|15668434|ref|NP_247232.1| - 8e-06 25.4 2.2 1e-05 25.0 0.2 2.1 2 1 0 2 2 2 1 Peptidase S24-like UPF0370 PF13980.1 gi|15668434|ref|NP_247232.1| - 0.28 11.0 2.2 0.69 9.7 1.5 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0370) NTPase_I-T PF01931.13 gi|15668435|ref|NP_247233.1| - 8.2e-62 207.8 0.2 1e-61 207.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF84 Gin PF10764.4 gi|15668435|ref|NP_247233.1| - 0.078 12.7 2.0 0.15 11.7 1.4 1.5 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin GTP_EFTU PF00009.22 gi|15668436|ref|NP_247234.1| - 4.1e-28 98.1 1.2 1.4e-24 86.5 0.0 3.1 3 0 0 3 3 3 2 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|15668436|ref|NP_247234.1| - 1e-22 80.0 4.4 3.8e-22 78.2 3.0 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 LAGLIDADG_3 PF14528.1 gi|15668436|ref|NP_247234.1| - 5.7e-19 68.1 11.3 1.9e-18 66.4 1.9 3.9 3 0 0 3 3 3 1 LAGLIDADG-like domain GTP_EFTU_D4 PF14578.1 gi|15668436|ref|NP_247234.1| - 5.7e-13 48.3 1.7 1.5e-12 47.0 0.2 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.20 gi|15668436|ref|NP_247234.1| - 1.4e-12 47.5 1.7 5.4e-10 39.2 0.0 3.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 LAGLIDADG_WhiA PF14527.1 gi|15668436|ref|NP_247234.1| - 7.7e-08 32.1 5.8 0.00048 19.9 0.3 3.7 3 0 0 3 3 3 2 WhiA LAGLIDADG-like domain HTH_3 PF01381.17 gi|15668436|ref|NP_247234.1| - 0.00071 19.3 0.1 0.0029 17.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix ATP_bind_1 PF03029.12 gi|15668436|ref|NP_247234.1| - 0.0016 18.0 0.0 0.0037 16.8 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein Ras PF00071.17 gi|15668436|ref|NP_247234.1| - 0.0032 16.8 0.0 0.015 14.7 0.0 2.1 2 0 0 2 2 2 1 Ras family MMR_HSR1 PF01926.18 gi|15668436|ref|NP_247234.1| - 0.0066 16.3 0.8 0.031 14.2 0.0 2.6 3 0 0 3 3 3 1 50S ribosome-binding GTPase ComZ PF10815.3 gi|15668436|ref|NP_247234.1| - 0.011 15.4 0.4 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 ComZ TPR_11 PF13414.1 gi|15668437|ref|NP_247235.1| - 3.2e-34 116.3 20.1 2e-08 33.7 2.7 5.8 4 1 1 6 6 6 5 TPR repeat TPR_1 PF00515.23 gi|15668437|ref|NP_247235.1| - 7.7e-33 110.7 37.0 4.1e-06 26.1 0.6 8.9 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15668437|ref|NP_247235.1| - 9.3e-33 109.5 25.6 4.1e-05 23.1 0.4 8.5 9 0 0 9 9 8 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15668437|ref|NP_247235.1| - 3.1e-32 110.5 0.6 5.2e-09 36.5 0.0 5.2 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15668437|ref|NP_247235.1| - 5.5e-32 107.1 37.0 0.00013 21.4 0.3 8.9 9 0 0 9 9 8 8 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15668437|ref|NP_247235.1| - 6.6e-27 91.5 0.1 0.00017 21.9 0.0 7.8 3 2 5 8 8 7 6 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15668437|ref|NP_247235.1| - 5.3e-26 90.7 6.7 8.2e-07 29.2 0.2 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15668437|ref|NP_247235.1| - 6.3e-26 90.1 15.6 1.6e-06 27.9 0.1 5.7 1 1 4 6 6 6 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15668437|ref|NP_247235.1| - 6.6e-23 78.9 12.2 0.00022 21.1 0.1 7.6 8 0 0 8 8 7 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|15668437|ref|NP_247235.1| - 1.9e-22 79.1 12.6 7.2e-10 38.8 1.9 4.3 3 1 1 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|15668437|ref|NP_247235.1| - 1.5e-21 75.3 11.5 0.003 17.9 0.0 8.2 9 1 0 9 9 7 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|15668437|ref|NP_247235.1| - 1.6e-17 63.0 0.0 1e-05 25.3 0.0 5.3 3 1 1 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15668437|ref|NP_247235.1| - 2.1e-17 61.4 12.1 0.026 14.3 0.0 8.9 7 1 2 9 9 9 4 Tetratricopeptide repeat NARP1 PF12569.3 gi|15668437|ref|NP_247235.1| - 5.1e-16 58.5 9.1 3.7e-05 22.6 0.6 4.1 2 1 2 4 4 4 4 NMDA receptor-regulated protein 1 DUF3808 PF10300.4 gi|15668437|ref|NP_247235.1| - 2.7e-11 42.7 2.6 0.11 11.0 0.0 4.9 2 1 3 5 5 5 4 Protein of unknown function (DUF3808) TPR_21 PF09976.4 gi|15668437|ref|NP_247235.1| - 1.2e-09 38.2 1.3 0.0095 15.8 0.0 3.9 3 1 1 4 4 4 2 Tetratricopeptide repeat PPR PF01535.15 gi|15668437|ref|NP_247235.1| - 4.5e-08 32.5 8.1 17 5.6 0.1 7.8 8 0 0 8 8 7 0 PPR repeat TPR_15 PF13429.1 gi|15668437|ref|NP_247235.1| - 8.3e-08 31.6 3.1 3.8e-05 22.8 1.2 3.0 3 1 0 3 3 3 1 Tetratricopeptide repeat DUF3856 PF12968.2 gi|15668437|ref|NP_247235.1| - 3e-06 27.1 0.9 0.025 14.4 0.0 3.9 2 1 3 5 5 5 2 Domain of Unknown Function (DUF3856) MIT PF04212.13 gi|15668437|ref|NP_247235.1| - 4.2e-06 26.5 13.1 0.26 11.1 0.9 5.3 4 2 1 5 5 5 3 MIT (microtubule interacting and transport) domain TPR_10 PF13374.1 gi|15668437|ref|NP_247235.1| - 5.9e-06 26.0 0.9 29 4.7 0.0 7.1 7 1 0 8 8 8 0 Tetratricopeptide repeat Apc5 PF12862.2 gi|15668437|ref|NP_247235.1| - 8e-06 25.6 1.9 0.51 10.2 0.1 4.7 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 5 Fis1_TPR_C PF14853.1 gi|15668437|ref|NP_247235.1| - 1.1e-05 25.1 9.8 1.8 8.5 0.0 5.8 5 1 0 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat ATP13 PF12921.2 gi|15668437|ref|NP_247235.1| - 0.00015 21.1 1.1 5 6.4 0.1 4.5 4 2 1 5 5 4 0 Mitochondrial ATPase expression TPR_20 PF14561.1 gi|15668437|ref|NP_247235.1| - 0.00031 20.8 6.9 0.11 12.6 0.1 4.2 2 1 3 5 5 5 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|15668437|ref|NP_247235.1| - 0.003 17.3 9.5 0.25 11.1 0.1 5.7 7 0 0 7 7 5 1 Tetratricopeptide repeat TPR_4 PF07721.9 gi|15668437|ref|NP_247235.1| - 0.0033 17.6 0.0 82 4.0 0.0 5.0 6 0 0 6 6 4 0 Tetratricopeptide repeat RPN7 PF10602.4 gi|15668437|ref|NP_247235.1| - 0.0051 16.2 13.7 0.081 12.2 0.5 5.2 2 2 2 6 6 6 1 26S proteasome subunit RPN7 YfiO PF13525.1 gi|15668437|ref|NP_247235.1| - 0.0079 15.6 2.7 0.61 9.5 0.1 3.2 4 0 0 4 4 3 1 Outer membrane lipoprotein CLTH PF10607.4 gi|15668437|ref|NP_247235.1| - 0.015 14.9 3.5 0.051 13.2 1.7 2.6 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain GTPase_Cys_C PF12631.2 gi|15668437|ref|NP_247235.1| - 0.017 15.5 3.4 18 5.8 0.0 5.1 3 2 3 6 6 6 0 Catalytic cysteine-containing C-terminus of GTPase, MnmE TPR_5 PF12688.2 gi|15668437|ref|NP_247235.1| - 0.025 14.5 0.1 3.9 7.5 0.0 3.1 1 1 1 2 2 2 0 Tetratrico peptide repeat PTS_IIA PF02255.11 gi|15668437|ref|NP_247235.1| - 0.06 13.2 0.6 1.2 9.0 0.0 3.1 3 1 0 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit Sel1 PF08238.7 gi|15668437|ref|NP_247235.1| - 0.17 12.5 5.9 23 5.7 0.1 4.9 5 0 0 5 5 4 0 Sel1 repeat IZUMO PF15005.1 gi|15668437|ref|NP_247235.1| - 0.27 11.2 1.7 0.58 10.2 1.2 1.6 1 0 0 1 1 1 0 Izumo sperm-egg fusion DUF2225 PF09986.4 gi|15668437|ref|NP_247235.1| - 0.27 10.6 8.8 0.47 9.8 3.5 2.7 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2225) NatB_MDM20 PF09797.4 gi|15668437|ref|NP_247235.1| - 0.54 8.9 10.1 3.1 6.4 7.0 2.3 1 1 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit FlgN PF05130.7 gi|15668437|ref|NP_247235.1| - 1.3 9.3 5.1 6.6 6.9 0.4 2.5 1 1 1 2 2 2 0 FlgN protein UBA PF00627.26 gi|15668437|ref|NP_247235.1| - 2.1 8.2 8.8 10 6.1 0.9 4.3 5 0 0 5 5 5 0 UBA/TS-N domain YfdX PF10938.3 gi|15668437|ref|NP_247235.1| - 7.9 6.1 8.0 4.5 6.9 0.1 3.6 3 1 0 3 3 3 0 YfdX protein Fer4_7 PF12838.2 gi|15668438|ref|NP_247236.1| - 2.1e-17 63.2 51.4 9.3e-08 32.3 8.1 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668438|ref|NP_247236.1| - 3e-17 61.6 35.4 1.6e-07 30.8 1.9 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.22 gi|15668438|ref|NP_247236.1| - 6.1e-17 60.4 42.4 6.6e-10 38.1 2.8 5.8 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_11 PF13247.1 gi|15668438|ref|NP_247236.1| - 1.9e-14 53.3 17.8 1.9e-12 46.9 9.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668438|ref|NP_247236.1| - 2.2e-14 53.0 27.3 2.1e-08 33.8 7.2 3.4 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668438|ref|NP_247236.1| - 3.5e-14 51.7 31.5 3.9e-05 23.3 1.8 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668438|ref|NP_247236.1| - 7.1e-14 51.8 52.0 4.2e-07 30.1 7.5 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668438|ref|NP_247236.1| - 4.3e-12 45.6 31.3 2.2e-06 27.3 8.2 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668438|ref|NP_247236.1| - 4e-11 43.4 22.7 0.012 16.3 2.4 4.2 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15668438|ref|NP_247236.1| - 1e-10 41.0 33.0 0.00053 20.1 1.5 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668438|ref|NP_247236.1| - 6.9e-10 38.7 36.3 0.013 16.0 4.5 4.4 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668438|ref|NP_247236.1| - 6.3e-07 29.6 27.7 0.0084 16.4 1.3 4.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668438|ref|NP_247236.1| - 2.7e-05 24.1 32.4 0.017 15.1 2.1 4.0 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668438|ref|NP_247236.1| - 0.0041 17.5 14.7 0.021 15.2 3.2 4.5 1 1 5 6 6 6 2 4Fe-4S dicluster domain Fer4_5 PF12801.2 gi|15668438|ref|NP_247236.1| - 0.097 12.4 2.5 12 5.8 0.3 3.6 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668438|ref|NP_247236.1| - 0.17 12.4 29.4 0.12 12.9 7.4 3.7 2 2 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|15668438|ref|NP_247236.1| - 6.9 7.1 27.5 0.2 12.0 1.0 4.6 4 2 1 5 5 5 0 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15668439|ref|NP_247237.1| - 7.4e-15 54.6 15.3 7.4e-15 54.6 10.6 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668439|ref|NP_247237.1| - 3.1e-12 46.6 27.7 2e-05 24.8 9.2 3.4 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668439|ref|NP_247237.1| - 3.6e-10 39.2 38.8 2e-06 27.4 1.1 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4 PF00037.22 gi|15668439|ref|NP_247237.1| - 1.3e-09 37.2 2.6 1.3e-09 37.2 1.8 5.5 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668439|ref|NP_247237.1| - 1.8e-09 37.2 31.1 6.1e-06 25.9 6.8 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668439|ref|NP_247237.1| - 1.2e-07 31.8 35.3 0.00035 20.7 8.0 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668439|ref|NP_247237.1| - 2.1e-07 30.7 30.0 7.8e-05 22.4 0.9 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668439|ref|NP_247237.1| - 9.6e-07 28.3 32.4 1.3e-05 24.8 0.9 4.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668439|ref|NP_247237.1| - 1.1e-06 28.7 46.5 0.0039 17.6 3.9 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668439|ref|NP_247237.1| - 8.9e-06 26.3 27.5 0.22 12.2 5.8 4.2 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15668439|ref|NP_247237.1| - 1.8e-05 24.6 36.7 0.00083 19.4 1.2 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668439|ref|NP_247237.1| - 0.0021 18.0 27.9 1.1 9.3 8.5 3.8 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668439|ref|NP_247237.1| - 0.007 16.7 7.5 0.067 13.5 0.5 4.4 1 1 5 6 6 6 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668439|ref|NP_247237.1| - 2.8 8.5 31.3 0.15 12.6 7.2 4.1 2 2 0 2 2 1 0 4Fe-4S single cluster domain TPP_enzyme_C PF02775.16 gi|15668440|ref|NP_247238.1| - 8.9e-29 100.0 0.2 1.4e-28 99.4 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|15668440|ref|NP_247238.1| - 0.0027 16.6 0.4 0.0037 16.2 0.3 1.3 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Mur_ligase_C PF02875.16 gi|15668440|ref|NP_247238.1| - 0.12 12.4 0.1 0.31 11.1 0.1 1.6 1 0 0 1 1 1 0 Mur ligase family, glutamate ligase domain HTH_38 PF13936.1 gi|15668440|ref|NP_247238.1| - 0.14 11.7 0.2 0.27 10.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain POR_N PF01855.14 gi|15668441|ref|NP_247239.1| - 2e-84 282.7 1.1 2.5e-84 282.3 0.7 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|15668441|ref|NP_247239.1| - 1.5e-05 24.9 2.4 1.9e-05 24.6 0.0 2.5 4 0 0 4 4 4 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 gi|15668441|ref|NP_247239.1| - 0.00083 18.8 1.2 0.0018 17.7 0.7 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FMN_dh PF01070.13 gi|15668441|ref|NP_247239.1| - 0.047 12.5 0.0 0.065 12.0 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Fer4 PF00037.22 gi|15668442|ref|NP_247240.1| - 1.5e-15 56.0 14.8 1.6e-08 33.7 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668442|ref|NP_247240.1| - 5.5e-12 45.3 9.8 7.2e-12 44.9 6.8 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668442|ref|NP_247240.1| - 2.2e-10 39.9 14.6 3.1e-05 23.6 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668442|ref|NP_247240.1| - 2.8e-10 40.3 7.2 3.7e-10 40.0 5.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668442|ref|NP_247240.1| - 1e-09 38.5 23.9 9e-07 29.0 9.2 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668442|ref|NP_247240.1| - 1.1e-09 37.8 24.1 2.4e-07 30.4 9.6 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668442|ref|NP_247240.1| - 1e-07 31.4 10.9 0.0013 18.5 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668442|ref|NP_247240.1| - 1.5e-07 32.0 11.3 0.0014 19.3 0.9 2.5 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|15668442|ref|NP_247240.1| - 3.4e-05 24.0 6.9 0.016 15.5 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668442|ref|NP_247240.1| - 0.0002 21.1 5.5 0.00025 20.8 3.8 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668442|ref|NP_247240.1| - 0.00024 21.0 11.5 0.054 13.5 1.2 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668442|ref|NP_247240.1| - 0.00038 20.5 11.2 0.0086 16.3 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668442|ref|NP_247240.1| - 0.00094 19.5 10.6 0.0044 17.4 0.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain IceA2 PF05862.6 gi|15668442|ref|NP_247240.1| - 0.032 13.9 0.1 0.065 12.9 0.0 1.4 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein Fer4_13 PF13370.1 gi|15668442|ref|NP_247240.1| - 0.18 12.2 14.3 11 6.4 9.9 2.6 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15668442|ref|NP_247240.1| - 0.4 11.3 16.4 0.29 11.8 3.3 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_5 PF12801.2 gi|15668442|ref|NP_247240.1| - 0.47 10.2 2.0 12 5.8 0.2 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668442|ref|NP_247240.1| - 0.53 10.8 13.9 3.3 8.3 2.3 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain POR PF01558.13 gi|15668443|ref|NP_247241.1| - 3.1e-41 141.1 0.9 3.6e-41 140.9 0.6 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase CCSMST1 PF15013.1 gi|15668445|ref|NP_247243.1| - 0.033 14.0 0.2 0.13 12.2 0.2 2.0 1 0 0 1 1 1 0 CCSMST1 family HTH_3 PF01381.17 gi|15668446|ref|NP_247244.1| - 5.4e-20 70.9 0.0 6.2e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|15668446|ref|NP_247244.1| - 1.3e-16 60.3 0.2 1.6e-16 60.1 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|15668446|ref|NP_247244.1| - 7.5e-10 38.8 0.0 9.1e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.1 gi|15668446|ref|NP_247244.1| - 2.4e-09 37.2 0.0 2.8e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|15668446|ref|NP_247244.1| - 2.3e-05 23.9 0.0 2.8e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15668446|ref|NP_247244.1| - 0.00012 21.6 0.0 0.00019 20.9 0.0 1.4 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.11 gi|15668446|ref|NP_247244.1| - 0.00012 21.2 0.0 0.00027 20.1 0.0 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|15668446|ref|NP_247244.1| - 0.00044 19.8 0.0 0.00098 18.7 0.0 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Crp_2 PF13545.1 gi|15668446|ref|NP_247244.1| - 0.0021 17.7 0.0 0.0039 16.9 0.0 1.5 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain HTH_17 PF12728.2 gi|15668446|ref|NP_247244.1| - 0.0035 17.5 0.0 0.0056 16.9 0.0 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|15668446|ref|NP_247244.1| - 0.0039 16.6 0.0 0.007 15.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|15668446|ref|NP_247244.1| - 0.0053 16.5 0.0 0.0085 15.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.7 gi|15668446|ref|NP_247244.1| - 0.0071 15.8 0.0 0.031 13.8 0.0 1.9 1 1 1 2 2 2 1 HTH DNA binding domain GntR PF00392.16 gi|15668446|ref|NP_247244.1| - 0.011 15.1 0.0 0.06 12.7 0.0 1.9 1 1 1 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_24 PF13412.1 gi|15668446|ref|NP_247244.1| - 0.02 14.2 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Tnp_4 PF13613.1 gi|15668446|ref|NP_247244.1| - 0.021 14.3 0.0 0.04 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_28 PF13518.1 gi|15668446|ref|NP_247244.1| - 0.028 14.4 0.0 0.045 13.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|15668446|ref|NP_247244.1| - 0.029 13.8 0.0 0.069 12.6 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 MarR PF01047.17 gi|15668446|ref|NP_247244.1| - 0.035 13.8 0.0 0.2 11.3 0.0 1.9 2 0 0 2 2 2 0 MarR family NUMOD1 PF07453.8 gi|15668446|ref|NP_247244.1| - 0.036 13.9 0.3 0.11 12.4 0.0 2.0 3 0 0 3 3 1 0 NUMOD1 domain MarR_2 PF12802.2 gi|15668446|ref|NP_247244.1| - 0.042 13.5 0.0 0.058 13.0 0.0 1.2 1 0 0 1 1 1 0 MarR family SAM_1 PF00536.25 gi|15668446|ref|NP_247244.1| - 0.048 13.8 0.1 0.068 13.3 0.1 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Sigma54_DBD PF04552.8 gi|15668446|ref|NP_247244.1| - 0.049 13.1 0.0 0.078 12.4 0.0 1.2 1 1 0 1 1 1 0 Sigma-54, DNA binding domain CENP-B_N PF04218.8 gi|15668446|ref|NP_247244.1| - 0.052 12.9 0.0 0.11 11.9 0.0 1.6 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain TetR_N PF00440.18 gi|15668446|ref|NP_247244.1| - 0.073 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family Phage_CI_repr PF07022.8 gi|15668446|ref|NP_247244.1| - 0.076 13.1 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain MerR PF00376.18 gi|15668446|ref|NP_247244.1| - 0.083 12.4 0.0 0.98 9.0 0.0 2.2 2 0 0 2 2 2 0 MerR family regulatory protein DUF134 PF02001.11 gi|15668446|ref|NP_247244.1| - 0.088 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF134 HTH_AsnC-type PF13404.1 gi|15668446|ref|NP_247244.1| - 0.13 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF357 PF04010.8 gi|15668447|ref|NP_247245.1| - 8e-30 102.3 0.3 1e-29 102.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) RRM_1 PF00076.17 gi|15668447|ref|NP_247245.1| - 0.076 12.6 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Radical_SAM PF04055.16 gi|15668448|ref|NP_247246.1| - 1.4e-18 67.6 0.1 3.1e-18 66.5 0.1 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Shisa PF13908.1 gi|15668449|ref|NP_247247.1| - 0.06 13.5 0.0 0.093 12.9 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3139 PF11337.3 gi|15668449|ref|NP_247247.1| - 0.071 13.3 1.0 0.071 13.3 0.7 3.0 2 2 1 3 3 3 0 Protein of unknown function (DUF3139) ABC2_membrane_3 PF12698.2 gi|15668449|ref|NP_247247.1| - 0.11 11.4 2.5 0.14 11.1 1.8 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.4 gi|15668450|ref|NP_247248.1| - 0.24 9.9 4.3 0.26 9.8 3.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Got1 PF04178.7 gi|15668450|ref|NP_247248.1| - 0.41 10.7 7.2 0.57 10.2 5.0 1.3 1 0 0 1 1 1 0 Got1/Sft2-like family POR_N PF01855.14 gi|15668451|ref|NP_247249.1| - 2.1e-83 279.3 0.1 2.6e-83 279.0 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|15668451|ref|NP_247249.1| - 3.8e-06 26.5 0.2 1.1e-05 25.0 0.1 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.15 gi|15668451|ref|NP_247249.1| - 2e-05 24.5 0.0 4.6e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 gi|15668452|ref|NP_247250.1| - 1e-66 223.6 0.0 3.1e-64 215.6 0.0 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|15668452|ref|NP_247250.1| - 1.1e-51 174.1 0.3 3.5e-51 172.5 0.0 2.0 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.16 gi|15668452|ref|NP_247250.1| - 3.4e-50 169.5 0.0 1.5e-49 167.4 0.0 2.2 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FKBP_C PF00254.23 gi|15668453|ref|NP_247251.1| - 1.2e-22 79.7 0.2 3.4e-22 78.2 0.1 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase YajC PF02699.10 gi|15668453|ref|NP_247251.1| - 0.0077 15.8 0.4 0.024 14.3 0.0 1.9 2 0 0 2 2 2 1 Preprotein translocase subunit UbiA PF01040.13 gi|15668454|ref|NP_247252.1| - 1.1e-45 155.8 14.8 1.3e-45 155.6 10.3 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF4577 PF15145.1 gi|15668454|ref|NP_247252.1| - 7.8 6.4 9.3 7.3 6.5 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4577) NAC PF01849.13 gi|15668455|ref|NP_247253.1| - 5e-16 57.9 1.3 5e-16 57.9 0.9 2.3 2 1 1 3 3 3 1 NAC domain UBA PF00627.26 gi|15668455|ref|NP_247253.1| - 2.5e-07 30.3 0.4 2.5e-07 30.3 0.3 2.2 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.1 gi|15668455|ref|NP_247253.1| - 0.0075 15.7 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 UBA-like domain PRESAN PF09687.5 gi|15668455|ref|NP_247253.1| - 0.01 15.9 0.7 0.01 15.9 0.5 2.2 2 1 1 3 3 3 0 Plasmodium RESA N-terminal CUE PF02845.11 gi|15668455|ref|NP_247253.1| - 0.059 12.8 0.1 0.14 11.6 0.0 1.6 1 0 0 1 1 1 0 CUE domain Hydantoinase_A PF01968.13 gi|15668455|ref|NP_247253.1| - 0.22 10.5 1.4 0.27 10.2 1.0 1.2 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DUF4373 PF14297.1 gi|15668455|ref|NP_247253.1| - 0.96 9.7 3.0 6.3 7.1 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4373) Histone_HNS PF00816.16 gi|15668455|ref|NP_247253.1| - 1.9 9.0 6.6 2.6 8.6 0.2 2.5 1 1 1 2 2 2 0 H-NS histone family MT PF12777.2 gi|15668455|ref|NP_247253.1| - 6.6 5.3 10.3 9.5 4.8 6.7 1.6 1 1 0 1 1 1 0 Microtubule-binding stalk of dynein motor Peptidase_M54 PF07998.6 gi|15668456|ref|NP_247254.1| - 8e-28 97.5 0.1 1.1e-27 97.0 0.1 1.3 1 1 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.19 gi|15668456|ref|NP_247254.1| - 0.00015 21.5 0.0 0.00017 21.3 0.0 1.2 1 0 0 1 1 1 1 Matrixin Metallopep PF12044.3 gi|15668456|ref|NP_247254.1| - 0.043 12.2 0.2 0.06 11.8 0.1 1.1 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M43 PF05572.8 gi|15668456|ref|NP_247254.1| - 0.058 12.9 0.0 0.084 12.4 0.0 1.2 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Pyridox_oxidase PF01243.15 gi|15668457|ref|NP_247255.1| - 5.9e-13 48.6 0.0 8.8e-13 48.0 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Cpn60_TCP1 PF00118.19 gi|15668457|ref|NP_247255.1| - 0.019 13.5 0.3 0.026 13.1 0.2 1.3 1 1 0 1 1 1 0 TCP-1/cpn60 chaperonin family Excalibur PF05901.6 gi|15668457|ref|NP_247255.1| - 0.17 12.2 0.9 0.43 10.9 0.6 1.8 1 1 0 1 1 1 0 Excalibur calcium-binding domain ParA PF10609.4 gi|15668458|ref|NP_247256.1| - 7.8e-36 121.8 0.8 1.9e-35 120.5 0.6 1.7 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|15668458|ref|NP_247256.1| - 9.1e-24 83.9 0.1 1.8e-23 82.9 0.1 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.6 gi|15668458|ref|NP_247256.1| - 2.5e-07 30.0 0.8 1.2e-06 27.8 0.6 1.9 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.13 gi|15668458|ref|NP_247256.1| - 6.8e-07 28.7 0.6 4.1e-05 22.8 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.1 gi|15668458|ref|NP_247256.1| - 4.7e-06 26.6 0.0 1.8e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|15668458|ref|NP_247256.1| - 9.7e-06 24.8 3.4 1.6e-05 24.1 0.2 2.3 2 1 0 2 2 2 1 Anion-transporting ATPase AAA_19 PF13245.1 gi|15668458|ref|NP_247256.1| - 0.00029 20.5 0.3 0.018 14.8 0.1 2.4 2 0 0 2 2 2 1 Part of AAA domain DUF258 PF03193.11 gi|15668458|ref|NP_247256.1| - 0.00046 19.4 0.2 0.00095 18.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 APS_kinase PF01583.15 gi|15668458|ref|NP_247256.1| - 0.00055 19.6 0.0 0.00087 18.9 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase ArgK PF03308.11 gi|15668458|ref|NP_247256.1| - 0.0011 17.8 0.7 0.0019 17.0 0.1 1.7 2 0 0 2 2 2 1 ArgK protein AAA_25 PF13481.1 gi|15668458|ref|NP_247256.1| - 0.0036 16.7 0.0 0.0064 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.1 gi|15668458|ref|NP_247256.1| - 0.005 16.4 0.7 2.1 7.9 0.3 2.2 2 0 0 2 2 2 2 AAA domain YhjQ PF06564.7 gi|15668458|ref|NP_247256.1| - 0.0067 15.8 0.1 0.028 13.7 0.0 1.8 2 0 0 2 2 2 1 YhjQ protein SRP54 PF00448.17 gi|15668458|ref|NP_247256.1| - 0.0086 15.5 1.0 0.029 13.7 0.2 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain VirC1 PF07015.6 gi|15668458|ref|NP_247256.1| - 0.0089 15.1 0.0 0.019 14.0 0.0 1.4 1 0 0 1 1 1 1 VirC1 protein AAA_17 PF13207.1 gi|15668458|ref|NP_247256.1| - 0.0098 16.7 0.5 0.024 15.4 0.1 1.8 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.1 gi|15668458|ref|NP_247256.1| - 0.012 15.8 0.3 0.04 14.2 0.1 1.9 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.7 gi|15668458|ref|NP_247256.1| - 0.025 13.6 0.3 0.093 11.8 0.1 1.8 2 0 0 2 2 2 0 Zeta toxin Glutaredoxin PF00462.19 gi|15668458|ref|NP_247256.1| - 0.046 13.7 0.1 1.1 9.2 0.0 2.8 2 1 1 3 3 3 0 Glutaredoxin AAA_22 PF13401.1 gi|15668458|ref|NP_247256.1| - 0.068 13.3 0.0 0.59 10.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|15668458|ref|NP_247256.1| - 0.07 12.6 0.2 0.13 11.7 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MobB PF03205.9 gi|15668458|ref|NP_247256.1| - 0.091 12.4 0.3 0.19 11.4 0.2 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B T2SE PF00437.15 gi|15668458|ref|NP_247256.1| - 0.1 11.4 0.1 0.17 10.7 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NB-ARC PF00931.17 gi|15668458|ref|NP_247256.1| - 0.11 11.2 0.2 0.24 10.2 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain KTI12 PF08433.5 gi|15668458|ref|NP_247256.1| - 0.12 11.6 0.1 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_30 PF13604.1 gi|15668458|ref|NP_247256.1| - 0.13 11.7 0.3 0.2 11.1 0.2 1.2 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.22 gi|15668458|ref|NP_247256.1| - 0.82 9.0 2.9 1.7 8.0 0.1 2.3 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Methyltransf_31 PF13847.1 gi|15668459|ref|NP_247257.1| - 8e-13 48.2 0.2 1.1e-12 47.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|15668459|ref|NP_247257.1| - 4e-12 45.8 0.4 5.7e-12 45.3 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|15668459|ref|NP_247257.1| - 3.3e-11 43.2 0.0 4.7e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668459|ref|NP_247257.1| - 5.6e-11 43.0 0.1 8.3e-11 42.4 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15668459|ref|NP_247257.1| - 7.7e-10 38.4 0.2 1.9e-09 37.1 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.1 gi|15668459|ref|NP_247257.1| - 2.3e-09 37.4 0.0 3.5e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|15668459|ref|NP_247257.1| - 5.8e-08 32.5 0.0 8.1e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_4 PF02390.12 gi|15668459|ref|NP_247257.1| - 1.7e-07 30.4 0.0 2.9e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.7 gi|15668459|ref|NP_247257.1| - 1.8e-06 28.3 0.0 3.6e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15668459|ref|NP_247257.1| - 4.2e-05 23.3 0.0 5.6e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15668459|ref|NP_247257.1| - 4.3e-05 22.9 0.0 6.3e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|15668459|ref|NP_247257.1| - 7.9e-05 22.2 0.1 0.00012 21.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.7 gi|15668459|ref|NP_247257.1| - 0.00057 20.3 0.0 0.00096 19.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.1 gi|15668459|ref|NP_247257.1| - 0.00059 19.5 0.0 0.00078 19.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FmrO PF07091.6 gi|15668459|ref|NP_247257.1| - 0.00067 18.7 0.0 0.00098 18.1 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) PCMT PF01135.14 gi|15668459|ref|NP_247257.1| - 0.021 14.3 0.0 0.036 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Pox_MCEL PF03291.11 gi|15668459|ref|NP_247257.1| - 0.024 13.5 0.3 0.036 12.9 0.2 1.2 1 0 0 1 1 1 0 mRNA capping enzyme DOT1 PF08123.8 gi|15668459|ref|NP_247257.1| - 0.025 13.8 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_10 PF05971.7 gi|15668459|ref|NP_247257.1| - 0.048 12.7 0.0 0.058 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF890) TehB PF03848.9 gi|15668459|ref|NP_247257.1| - 0.048 12.8 0.1 0.085 12.0 0.1 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB HSP20 PF00011.16 gi|15668460|ref|NP_247258.1| - 6.5e-12 45.2 0.1 8e-12 44.9 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|15668460|ref|NP_247258.1| - 0.03 14.8 0.1 0.051 14.1 0.0 1.5 1 1 0 1 1 1 0 CS domain TFIID-18kDa PF02269.11 gi|15668461|ref|NP_247259.1| - 0.043 13.6 0.4 0.099 12.4 0.1 1.9 1 1 1 2 2 2 0 Transcription initiation factor IID, 18kD subunit HTH_45 PF14947.1 gi|15668462|ref|NP_247260.1| - 9.6e-28 95.8 1.6 1.1e-27 95.6 1.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.1 gi|15668462|ref|NP_247260.1| - 0.0085 15.7 0.5 0.011 15.3 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Topoisom_bac PF01131.15 gi|15668462|ref|NP_247260.1| - 0.019 13.8 0.1 0.026 13.3 0.0 1.2 1 0 0 1 1 1 0 DNA topoisomerase MarR PF01047.17 gi|15668462|ref|NP_247260.1| - 0.12 12.1 0.0 0.38 10.4 0.0 1.8 1 1 1 2 2 2 0 MarR family MerR_1 PF13411.1 gi|15668462|ref|NP_247260.1| - 0.12 12.1 0.2 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 MerR HTH family regulatory protein Transglut_C PF00927.17 gi|15668463|ref|NP_247261.1| - 0.009 16.0 1.0 0.048 13.7 0.6 2.0 1 1 1 2 2 2 1 Transglutaminase family, C-terminal ig like domain LEA_2 PF03168.8 gi|15668463|ref|NP_247261.1| - 0.012 15.9 0.5 0.017 15.5 0.3 1.3 1 0 0 1 1 1 0 Late embryogenesis abundant protein DUF1034 PF06280.7 gi|15668463|ref|NP_247261.1| - 0.02 15.2 0.2 0.028 14.7 0.1 1.4 1 0 0 1 1 1 0 Fn3-like domain (DUF1034) HTH_45 PF14947.1 gi|15668465|ref|NP_247263.1| - 2.4e-27 94.5 2.9 7.7e-27 92.9 2.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix Cnd1 PF12717.2 gi|15668465|ref|NP_247263.1| - 0.005 16.7 3.2 0.0074 16.1 2.2 1.2 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 DUF3116 PF11313.3 gi|15668465|ref|NP_247263.1| - 0.0097 15.4 0.6 0.35 10.4 0.4 2.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3116) CLTH PF10607.4 gi|15668465|ref|NP_247263.1| - 0.81 9.3 5.2 1.2 8.7 3.6 1.7 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain SRP54 PF00448.17 gi|15668466|ref|NP_247264.1| - 1.2e-77 259.7 2.6 1.2e-77 259.7 1.8 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|15668466|ref|NP_247264.1| - 4.8e-14 52.2 11.4 4.8e-14 52.2 7.9 4.8 3 2 1 4 4 3 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.7 gi|15668466|ref|NP_247264.1| - 2.4e-06 26.7 0.5 2.4e-06 26.7 0.3 2.2 2 0 0 2 2 2 1 Zeta toxin ArgK PF03308.11 gi|15668466|ref|NP_247264.1| - 3.3e-06 26.0 2.7 3.3e-06 26.0 1.9 2.0 2 1 0 2 2 2 1 ArgK protein AAA_22 PF13401.1 gi|15668466|ref|NP_247264.1| - 7.9e-06 26.0 0.2 2.4e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.15 gi|15668466|ref|NP_247264.1| - 2.2e-05 24.1 0.0 5.3e-05 22.9 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.1 gi|15668466|ref|NP_247264.1| - 3.5e-05 23.7 0.1 8.3e-05 22.4 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|15668466|ref|NP_247264.1| - 4.8e-05 23.0 1.9 0.00011 21.8 1.3 1.6 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|15668466|ref|NP_247264.1| - 7.3e-05 22.7 1.0 0.0013 18.7 0.1 2.5 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.12 gi|15668466|ref|NP_247264.1| - 8.6e-05 21.9 0.4 8.6e-05 21.9 0.3 4.0 2 2 1 3 3 3 1 Thymidylate kinase AAA_16 PF13191.1 gi|15668466|ref|NP_247264.1| - 0.0001 22.3 0.1 0.0025 17.8 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain MobB PF03205.9 gi|15668466|ref|NP_247264.1| - 0.00013 21.7 16.0 0.00018 21.2 3.8 3.7 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|15668466|ref|NP_247264.1| - 0.00022 20.6 6.0 0.00022 20.6 4.2 3.3 2 2 0 2 2 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.1 gi|15668466|ref|NP_247264.1| - 0.00024 20.8 4.1 0.0085 15.8 0.3 2.4 1 1 1 2 2 2 1 Part of AAA domain YjeF_N PF03853.10 gi|15668466|ref|NP_247264.1| - 0.00062 19.4 9.7 0.0049 16.4 0.4 2.8 2 1 1 3 3 2 2 YjeF-related protein N-terminus cobW PF02492.14 gi|15668466|ref|NP_247264.1| - 0.001 18.5 1.4 0.001 18.5 1.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PPK2 PF03976.9 gi|15668466|ref|NP_247264.1| - 0.0013 18.0 0.3 0.0045 16.3 0.2 2.0 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) ABC_tran PF00005.22 gi|15668466|ref|NP_247264.1| - 0.0017 18.6 3.4 0.016 15.4 0.0 2.6 2 1 0 2 2 2 1 ABC transporter ResIII PF04851.10 gi|15668466|ref|NP_247264.1| - 0.002 17.9 0.3 0.002 17.9 0.2 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit VirC1 PF07015.6 gi|15668466|ref|NP_247264.1| - 0.0038 16.3 0.0 0.0078 15.3 0.0 1.5 1 0 0 1 1 1 1 VirC1 protein AAA_14 PF13173.1 gi|15668466|ref|NP_247264.1| - 0.005 16.7 3.7 0.046 13.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15668466|ref|NP_247264.1| - 0.0097 16.7 0.2 0.0097 16.7 0.1 3.0 2 2 0 2 2 2 1 AAA domain KTI12 PF08433.5 gi|15668466|ref|NP_247264.1| - 0.014 14.5 0.0 0.014 14.5 0.0 2.6 3 1 1 4 4 4 0 Chromatin associated protein KTI12 Glyco_transf_4 PF13439.1 gi|15668466|ref|NP_247264.1| - 0.019 14.6 0.3 1.5 8.4 0.1 2.3 1 1 1 2 2 2 0 Glycosyltransferase Family 4 6PF2K PF01591.13 gi|15668466|ref|NP_247264.1| - 0.019 14.0 2.5 0.022 13.8 0.0 2.2 2 0 0 2 2 2 0 6-phosphofructo-2-kinase AAA PF00004.24 gi|15668466|ref|NP_247264.1| - 0.031 14.4 0.6 0.031 14.4 0.4 3.1 1 1 2 3 3 3 0 ATPase family associated with various cellular activities (AAA) Arf PF00025.16 gi|15668466|ref|NP_247264.1| - 0.037 13.2 3.7 0.13 11.4 0.1 2.7 2 0 0 2 2 2 0 ADP-ribosylation factor family DUF258 PF03193.11 gi|15668466|ref|NP_247264.1| - 0.05 12.7 0.4 0.16 11.1 0.3 2.0 1 1 0 1 1 1 0 Protein of unknown function, DUF258 Miro PF08477.8 gi|15668466|ref|NP_247264.1| - 0.059 13.8 0.1 0.059 13.8 0.1 3.0 2 2 0 2 2 1 0 Miro-like protein LpxK PF02606.9 gi|15668466|ref|NP_247264.1| - 0.06 12.2 2.7 0.1 11.5 0.6 2.2 1 1 1 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase ORC3_N PF07034.6 gi|15668466|ref|NP_247264.1| - 0.064 12.2 0.1 0.064 12.2 0.0 2.2 2 0 0 2 2 2 0 Origin recognition complex (ORC) subunit 3 N-terminus NACHT PF05729.7 gi|15668466|ref|NP_247264.1| - 0.084 12.5 0.2 0.17 11.4 0.1 1.5 1 0 0 1 1 1 0 NACHT domain Fe-ADH PF00465.14 gi|15668466|ref|NP_247264.1| - 0.09 11.3 9.2 0.1 11.2 0.5 2.8 2 1 1 3 3 3 0 Iron-containing alcohol dehydrogenase Abhydrolase_5 PF12695.2 gi|15668466|ref|NP_247264.1| - 0.11 12.2 0.1 1.5 8.5 0.1 2.1 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF2855 PF11017.3 gi|15668466|ref|NP_247264.1| - 0.11 11.6 0.1 0.23 10.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) AAA_25 PF13481.1 gi|15668466|ref|NP_247264.1| - 0.11 11.8 1.3 0.38 10.1 0.9 1.9 1 1 0 1 1 1 0 AAA domain PIG-L PF02585.12 gi|15668466|ref|NP_247264.1| - 0.25 11.8 2.5 0.4 11.1 0.0 2.4 2 1 0 2 2 2 0 GlcNAc-PI de-N-acetylase AAA_5 PF07728.9 gi|15668466|ref|NP_247264.1| - 2 8.1 5.2 1.3 8.7 0.0 2.7 2 1 0 3 3 3 0 AAA domain (dynein-related subfamily) OTCace PF00185.19 gi|15668466|ref|NP_247264.1| - 4.5 7.1 7.0 6.9 6.5 1.9 2.6 2 1 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PhaG_MnhG_YufB PF03334.9 gi|15668467|ref|NP_247265.1| - 2.6e-11 43.4 5.5 5.4e-11 42.3 3.8 1.5 1 1 0 1 1 1 1 Na+/H+ antiporter subunit YwiC PF14256.1 gi|15668467|ref|NP_247265.1| - 0.12 12.4 1.8 0.16 12.0 1.2 1.2 1 0 0 1 1 1 0 YwiC-like protein Thymidylate_kin PF02223.12 gi|15668468|ref|NP_247266.1| - 8.4e-55 185.0 1.3 9.5e-55 184.8 0.9 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.1 gi|15668468|ref|NP_247266.1| - 5e-08 33.0 0.0 6.4e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15668468|ref|NP_247266.1| - 9.3e-07 29.6 0.3 9.7e-06 26.4 0.1 2.1 1 1 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|15668468|ref|NP_247266.1| - 1.3e-05 25.5 2.8 7.2e-05 23.0 1.9 2.2 1 1 0 1 1 1 1 AAA domain SKI PF01202.17 gi|15668468|ref|NP_247266.1| - 2e-05 24.5 2.2 0.0032 17.3 0.3 2.3 2 1 0 2 2 2 2 Shikimate kinase dNK PF01712.14 gi|15668468|ref|NP_247266.1| - 0.0016 18.3 1.0 0.0067 16.3 0.7 1.9 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_33 PF13671.1 gi|15668468|ref|NP_247266.1| - 0.0068 16.2 0.0 0.01 15.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain ADK PF00406.17 gi|15668468|ref|NP_247266.1| - 0.0076 16.1 0.3 0.013 15.4 0.2 1.3 1 1 0 1 1 1 1 Adenylate kinase SLS PF14611.1 gi|15668468|ref|NP_247266.1| - 0.045 13.1 0.2 0.085 12.2 0.1 1.5 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator SRP54 PF00448.17 gi|15668468|ref|NP_247266.1| - 0.055 12.9 0.1 0.54 9.6 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA PF00004.24 gi|15668468|ref|NP_247266.1| - 0.067 13.3 1.8 0.24 11.6 1.3 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DEAD_assoc PF08494.6 gi|15668469|ref|NP_247267.1| - 3.7e-55 186.5 0.2 7.7e-55 185.5 0.2 1.6 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|15668469|ref|NP_247267.1| - 7e-32 110.2 0.1 6.8e-31 107.0 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15668469|ref|NP_247267.1| - 3.6e-15 55.5 0.1 2.2e-14 53.0 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|15668469|ref|NP_247267.1| - 7.9e-10 38.8 0.5 2.7e-09 37.1 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|15668469|ref|NP_247267.1| - 0.00016 20.5 0.4 0.00041 19.2 0.3 1.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain PhoH PF02562.11 gi|15668469|ref|NP_247267.1| - 0.0012 18.1 0.0 0.0033 16.6 0.0 1.8 1 0 0 1 1 1 1 PhoH-like protein AAA_22 PF13401.1 gi|15668469|ref|NP_247267.1| - 0.0039 17.3 0.2 0.075 13.1 0.1 3.0 2 1 0 2 2 2 1 AAA domain Glyco_transf_4 PF13439.1 gi|15668469|ref|NP_247267.1| - 0.013 15.1 0.0 0.033 13.8 0.0 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Oxidored_nitro PF00148.14 gi|15668469|ref|NP_247267.1| - 0.033 12.8 0.2 0.11 11.0 0.0 1.9 3 0 0 3 3 3 0 Nitrogenase component 1 type Oxidoreductase AAA_11 PF13086.1 gi|15668469|ref|NP_247267.1| - 0.084 12.4 0.3 0.98 8.9 0.0 2.6 2 1 1 3 3 3 0 AAA domain E2_bind PF08825.5 gi|15668469|ref|NP_247267.1| - 0.15 11.8 2.0 0.24 11.1 0.1 2.4 3 0 0 3 3 3 0 E2 binding domain FdhD-NarQ PF02634.10 gi|15668470|ref|NP_247268.1| - 2.4e-52 177.7 0.0 1.7e-43 148.7 0.0 2.0 1 1 1 2 2 2 2 FdhD/NarQ family PC4 PF02229.11 gi|15668470|ref|NP_247268.1| - 0.22 10.7 1.8 0.24 10.6 0.1 1.8 2 0 0 2 2 2 0 Transcriptional Coactivator p15 (PC4) Lactamase_B PF00753.22 gi|15668471|ref|NP_247269.1| - 3e-18 66.1 0.1 8.9e-17 61.3 0.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|15668471|ref|NP_247269.1| - 1.4e-05 24.8 0.1 1.8e-05 24.5 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|15668471|ref|NP_247269.1| - 1.7e-05 24.4 0.0 1.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain G8 PF10162.4 gi|15668471|ref|NP_247269.1| - 0.022 14.5 0.4 0.058 13.1 0.1 1.7 2 0 0 2 2 2 0 G8 domain Rib_5-P_isom_A PF06026.9 gi|15668471|ref|NP_247269.1| - 0.051 12.8 0.9 0.071 12.4 0.1 1.7 2 1 0 2 2 2 0 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DUF507 PF04368.8 gi|15668471|ref|NP_247269.1| - 0.11 12.1 0.3 0.11 12.1 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF507) DUF310 PF03750.8 gi|15668472|ref|NP_247270.1| - 0.037 14.2 4.4 0.62 10.2 0.2 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF310) MIT PF04212.13 gi|15668472|ref|NP_247270.1| - 0.081 12.8 0.3 0.31 10.9 0.2 2.0 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_8 PF13181.1 gi|15668472|ref|NP_247270.1| - 1.5 8.7 4.4 1.4 8.9 1.1 2.5 2 1 1 3 3 3 0 Tetratricopeptide repeat Flavodoxin_3 PF12641.2 gi|15668473|ref|NP_247271.1| - 2.3e-16 59.6 2.8 1.1e-13 50.9 0.1 2.0 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_5 PF12724.2 gi|15668473|ref|NP_247271.1| - 2.3e-12 47.1 0.0 2.8e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|15668473|ref|NP_247271.1| - 1.3e-06 27.8 0.2 0.021 14.2 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin Flavodoxin_1 PF00258.20 gi|15668473|ref|NP_247271.1| - 5.6e-05 23.1 0.1 0.00018 21.4 0.1 1.9 1 1 0 1 1 1 1 Flavodoxin FBPase_3 PF01950.11 gi|15668474|ref|NP_247272.1| - 3.8e-187 621.6 0.0 4.3e-187 621.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase LysR_substrate PF03466.15 gi|15668475|ref|NP_247273.1| - 3.3e-38 130.8 0.0 4.1e-38 130.5 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.22 gi|15668475|ref|NP_247273.1| - 4.1e-18 64.8 0.0 1.3e-17 63.2 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family PBP_like PF12727.2 gi|15668475|ref|NP_247273.1| - 9.6e-11 40.9 0.0 3.4e-09 35.9 0.0 2.2 1 1 0 1 1 1 1 PBP superfamily domain HTH_20 PF12840.2 gi|15668475|ref|NP_247273.1| - 0.00026 20.7 0.0 0.0017 18.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain PBP_like_2 PF12849.2 gi|15668475|ref|NP_247273.1| - 0.0011 18.4 0.0 0.0029 17.1 0.0 1.7 1 1 0 1 1 1 1 PBP superfamily domain HTH_5 PF01022.15 gi|15668475|ref|NP_247273.1| - 0.0031 17.1 0.3 0.011 15.3 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|15668475|ref|NP_247273.1| - 0.0049 16.2 2.2 0.014 14.7 0.0 2.8 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding SBP_bac_11 PF13531.1 gi|15668475|ref|NP_247273.1| - 0.011 15.4 0.0 0.027 14.1 0.0 1.7 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein HTH_11 PF08279.7 gi|15668475|ref|NP_247273.1| - 0.029 14.0 0.2 0.29 10.8 0.0 2.6 3 0 0 3 3 3 0 HTH domain HTH_34 PF13601.1 gi|15668475|ref|NP_247273.1| - 0.067 13.2 0.1 0.27 11.2 0.0 2.1 2 1 0 2 2 1 0 Winged helix DNA-binding domain ANT PF03374.9 gi|15668475|ref|NP_247273.1| - 0.07 13.1 0.1 0.3 11.1 0.0 2.1 3 0 0 3 3 3 0 Phage antirepressor protein KilAC domain HTH_Tnp_ISL3 PF13542.1 gi|15668475|ref|NP_247273.1| - 0.075 12.2 0.3 2.4 7.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4 PF04545.11 gi|15668475|ref|NP_247273.1| - 0.083 12.2 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_40 PF14493.1 gi|15668475|ref|NP_247273.1| - 0.093 12.9 0.1 0.27 11.4 0.0 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.17 gi|15668475|ref|NP_247273.1| - 0.1 12.3 0.1 0.36 10.5 0.0 2.0 2 0 0 2 2 2 0 MarR family MarR_2 PF12802.2 gi|15668475|ref|NP_247273.1| - 0.15 11.7 0.1 2.1 8.1 0.0 2.6 3 0 0 3 3 2 0 MarR family Lactamase_B PF00753.22 gi|15668476|ref|NP_247274.1| - 1.8e-14 53.8 0.0 2e-13 50.4 0.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|15668476|ref|NP_247274.1| - 4.6e-07 29.5 0.0 6e-07 29.1 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|15668476|ref|NP_247274.1| - 0.01 15.5 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF1847 PF08901.6 gi|15668476|ref|NP_247274.1| - 0.019 14.4 0.1 0.03 13.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) Radical_SAM PF04055.16 gi|15668476|ref|NP_247274.1| - 0.025 14.7 0.1 0.074 13.2 0.0 1.9 2 0 0 2 2 2 0 Radical SAM superfamily PRA-PH PF01503.12 gi|15668477|ref|NP_247275.1| - 6.9e-18 64.7 0.3 8e-18 64.5 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.12 gi|15668477|ref|NP_247275.1| - 0.0032 17.3 2.3 0.0032 17.3 1.6 2.2 1 1 0 2 2 2 1 MazG nucleotide pyrophosphohydrolase domain Staphostatin_A PF09022.5 gi|15668477|ref|NP_247275.1| - 0.058 13.2 0.2 0.071 12.9 0.2 1.3 1 0 0 1 1 1 0 Staphostatin A CemA PF03040.9 gi|15668477|ref|NP_247275.1| - 0.15 11.6 1.2 0.17 11.4 0.8 1.1 1 0 0 1 1 1 0 CemA family DMRL_synthase PF00885.14 gi|15668478|ref|NP_247276.1| - 2.6e-38 130.9 1.0 3.1e-38 130.6 0.7 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Hexapep PF00132.19 gi|15668479|ref|NP_247277.1| - 1.2e-24 84.6 25.9 8.3e-12 44.0 1.3 4.3 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|15668479|ref|NP_247277.1| - 8e-09 34.9 4.7 8e-09 34.9 3.3 3.9 2 2 2 4 4 4 3 Hexapeptide repeat of succinyl-transferase Voltage_CLC PF00654.15 gi|15668480|ref|NP_247278.1| - 5.6e-68 229.5 25.5 5.6e-68 229.5 17.7 1.7 1 1 1 2 2 2 1 Voltage gated chloride channel DUF3522 PF12036.3 gi|15668480|ref|NP_247278.1| - 0.023 14.5 2.6 1.3 8.7 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3522) DUF758 PF05527.6 gi|15668481|ref|NP_247279.1| - 0.054 13.1 0.7 0.056 13.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF758) Fer4 PF00037.22 gi|15668481|ref|NP_247279.1| - 0.069 12.7 1.8 0.15 11.6 1.3 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain DUF845 PF05820.6 gi|15668481|ref|NP_247279.1| - 1.3 8.7 5.3 1.2 8.8 1.4 1.8 1 1 1 2 2 2 0 Baculovirus protein of unknown function (DUF845) Thioredoxin_3 PF13192.1 gi|15668482|ref|NP_247280.1| - 1.1e-19 70.0 2.2 1.3e-19 69.8 1.5 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|15668482|ref|NP_247280.1| - 7.6e-12 45.0 0.1 1.2e-11 44.3 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.15 gi|15668482|ref|NP_247280.1| - 3.6e-11 42.6 0.2 4.2e-11 42.4 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.1 gi|15668482|ref|NP_247280.1| - 6.7e-10 39.2 0.7 6.7e-05 22.9 0.1 2.0 1 1 1 2 2 2 2 Thioredoxin DSBA PF01323.15 gi|15668482|ref|NP_247280.1| - 2.6e-09 36.9 0.1 0.00056 19.5 0.0 2.0 1 1 1 2 2 2 2 DSBA-like thioredoxin domain DUF836 PF05768.9 gi|15668482|ref|NP_247280.1| - 1.1e-05 25.5 0.0 1.2e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) KaiB PF07689.7 gi|15668482|ref|NP_247280.1| - 1.2e-05 24.6 0.1 1.5e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 KaiB domain Thioredoxin_2 PF13098.1 gi|15668482|ref|NP_247280.1| - 2e-05 24.7 0.5 0.00023 21.3 0.4 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain DUF1223 PF06764.6 gi|15668482|ref|NP_247280.1| - 2.6e-05 24.1 0.1 0.0002 21.2 0.0 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF1223) Thioredoxin_5 PF13743.1 gi|15668482|ref|NP_247280.1| - 0.0078 15.8 0.2 0.057 12.9 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin TrbC_Ftype PF09673.5 gi|15668482|ref|NP_247280.1| - 0.014 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein ABC_transp_aux PF09822.4 gi|15668482|ref|NP_247280.1| - 0.024 14.0 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 ABC-type uncharacterized transport system DUF953 PF06110.6 gi|15668482|ref|NP_247280.1| - 0.033 13.6 0.8 0.07 12.5 0.5 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Thioredoxin_8 PF13905.1 gi|15668482|ref|NP_247280.1| - 0.036 14.1 0.1 1.7 8.7 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin-like DUF1525 PF07511.6 gi|15668482|ref|NP_247280.1| - 0.05 13.5 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) Thioredoxin_6 PF13848.1 gi|15668482|ref|NP_247280.1| - 0.1 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_9 PF14595.1 gi|15668482|ref|NP_247280.1| - 0.12 11.8 0.2 0.14 11.7 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin DUF169 PF02596.10 gi|15668483|ref|NP_247281.1| - 3.3e-72 242.4 0.3 3.7e-72 242.2 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF530 PF04409.7 gi|15668483|ref|NP_247281.1| - 0.062 11.3 0.4 0.087 10.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF530) Arginase PF00491.16 gi|15668484|ref|NP_247282.1| - 1.1e-74 251.1 0.0 1.3e-74 251.0 0.0 1.0 1 0 0 1 1 1 1 Arginase family Robl_LC7 PF03259.12 gi|15668485|ref|NP_247283.1| - 6.5e-24 83.3 1.5 8.3e-24 82.9 1.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.5 gi|15668485|ref|NP_247283.1| - 0.0057 16.2 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting Robl_LC7 PF03259.12 gi|15668486|ref|NP_247284.1| - 9.1e-16 57.2 0.0 1e-15 57.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain YjcQ PF09639.5 gi|15668486|ref|NP_247284.1| - 0.16 12.1 0.7 1.2 9.2 0.0 2.2 1 1 1 2 2 2 0 YjcQ protein Spermine_synth PF01564.12 gi|15668488|ref|NP_247286.1| - 5.9e-93 310.3 0.2 8.3e-93 309.8 0.1 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_PK PF05891.7 gi|15668488|ref|NP_247286.1| - 0.00035 19.9 0.0 0.00053 19.3 0.0 1.3 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase MTS PF05175.9 gi|15668488|ref|NP_247286.1| - 0.00051 19.4 0.0 0.00088 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.7 gi|15668488|ref|NP_247286.1| - 0.002 18.5 0.1 0.0069 16.8 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_30 PF05430.6 gi|15668488|ref|NP_247286.1| - 0.0049 16.5 0.0 0.032 13.9 0.0 2.2 1 1 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_31 PF13847.1 gi|15668488|ref|NP_247286.1| - 0.0059 16.1 0.4 0.032 13.8 0.1 2.1 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668488|ref|NP_247286.1| - 0.013 16.1 0.0 0.023 15.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15668488|ref|NP_247286.1| - 0.032 13.9 0.0 0.34 10.6 0.0 2.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15668488|ref|NP_247286.1| - 0.081 13.2 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15668488|ref|NP_247286.1| - 0.09 12.1 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 LAGLIDADG_3 PF14528.1 gi|15668489|ref|NP_247287.1| - 1.6e-19 69.9 3.5 1.4e-09 38.0 0.0 2.6 2 0 0 2 2 2 2 LAGLIDADG-like domain HTH_7 PF02796.10 gi|15668489|ref|NP_247287.1| - 1.6e-15 56.6 0.9 3.1e-07 30.1 0.1 2.7 2 0 0 2 2 2 2 Helix-turn-helix domain of resolvase HTH_23 PF13384.1 gi|15668489|ref|NP_247287.1| - 2.6e-15 55.5 0.4 4e-07 29.4 0.0 2.4 2 0 0 2 2 2 2 Homeodomain-like domain HTH_38 PF13936.1 gi|15668489|ref|NP_247287.1| - 8.2e-15 54.0 1.6 1.5e-06 27.6 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_28 PF13518.1 gi|15668489|ref|NP_247287.1| - 2.2e-10 40.3 0.6 0.00025 20.9 0.1 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain GerE PF00196.14 gi|15668489|ref|NP_247287.1| - 3.6e-09 35.7 0.1 0.00074 18.7 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.7 gi|15668489|ref|NP_247287.1| - 2.3e-07 30.1 0.1 0.02 14.3 0.0 2.3 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r4 PF04545.11 gi|15668489|ref|NP_247287.1| - 5.8e-07 28.7 0.0 0.00055 19.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.1 gi|15668489|ref|NP_247287.1| - 1.4e-06 27.3 0.0 0.0011 18.1 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain of transposase family ISL3 Terminase_5 PF06056.7 gi|15668489|ref|NP_247287.1| - 1.4e-06 27.7 0.4 0.068 12.7 0.1 2.5 2 0 0 2 2 2 2 Putative ATPase subunit of terminase (gpP-like) CPSase_L_D3 PF02787.14 gi|15668489|ref|NP_247287.1| - 6.4e-06 25.9 0.1 0.092 12.5 0.0 2.9 2 1 1 3 3 3 2 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HTH_17 PF12728.2 gi|15668489|ref|NP_247287.1| - 7.5e-06 26.1 0.2 0.011 15.9 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|15668489|ref|NP_247287.1| - 1.3e-05 25.2 0.1 0.066 13.3 0.0 2.3 2 0 0 2 2 2 2 Winged helix-turn helix LAGLIDADG_WhiA PF14527.1 gi|15668489|ref|NP_247287.1| - 1.4e-05 24.9 4.1 4.1e-05 23.3 0.1 3.0 2 1 1 3 3 3 1 WhiA LAGLIDADG-like domain Sigma70_ECF PF07638.6 gi|15668489|ref|NP_247287.1| - 0.0001 22.0 0.0 0.07 12.7 0.0 2.2 2 0 0 2 2 2 1 ECF sigma factor Hom_end PF05204.9 gi|15668489|ref|NP_247287.1| - 0.00011 22.1 0.0 0.1 12.5 0.0 2.4 2 0 0 2 2 2 1 Homing endonuclease HTH_10 PF04967.7 gi|15668489|ref|NP_247287.1| - 0.0002 20.8 0.1 0.11 12.1 0.0 3.2 3 0 0 3 3 2 1 HTH DNA binding domain HTH_40 PF14493.1 gi|15668489|ref|NP_247287.1| - 0.00021 21.4 0.4 0.7 10.1 0.0 2.9 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15668489|ref|NP_247287.1| - 0.00035 20.1 0.1 0.92 9.2 0.0 2.6 2 0 0 2 2 2 2 HTH domain DUF3853 PF12964.2 gi|15668489|ref|NP_247287.1| - 0.00057 19.6 1.1 0.27 11.0 0.1 2.6 1 1 1 2 2 2 1 Protein of unknown function (DUF3853) Phage_NinH PF06322.6 gi|15668489|ref|NP_247287.1| - 0.00063 19.3 0.3 0.033 13.7 0.0 2.6 2 0 0 2 2 2 1 Phage NinH protein DUF1670 PF07900.6 gi|15668489|ref|NP_247287.1| - 0.00068 18.9 1.8 0.012 14.8 0.1 2.7 3 0 0 3 3 3 1 Protein of unknown function (DUF1670) HTH_24 PF13412.1 gi|15668489|ref|NP_247287.1| - 0.0007 18.9 0.8 1.2 8.5 0.0 3.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_Tnp_Tc3_2 PF01498.13 gi|15668489|ref|NP_247287.1| - 0.00077 19.4 0.5 0.052 13.5 0.2 2.7 2 0 0 2 2 2 1 Transposase CENP-B_N PF04218.8 gi|15668489|ref|NP_247287.1| - 0.00082 18.7 0.3 0.095 12.1 0.1 2.4 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain ANT PF03374.9 gi|15668489|ref|NP_247287.1| - 0.0017 18.3 0.1 0.14 12.1 0.0 2.7 3 0 0 3 3 2 1 Phage antirepressor protein KilAC domain HTH_3 PF01381.17 gi|15668489|ref|NP_247287.1| - 0.0017 18.1 0.4 1.1 9.2 0.1 2.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_Tnp_IS630 PF01710.11 gi|15668489|ref|NP_247287.1| - 0.0036 16.9 2.7 0.35 10.5 0.0 3.0 2 1 1 3 3 3 1 Transposase Phage_antitermQ PF06530.7 gi|15668489|ref|NP_247287.1| - 0.0044 16.5 0.6 1.6 8.3 0.0 2.5 2 0 0 2 2 2 1 Phage antitermination protein Q MarR_2 PF12802.2 gi|15668489|ref|NP_247287.1| - 0.0045 16.6 0.0 0.82 9.3 0.0 2.4 2 0 0 2 2 2 1 MarR family RepB PF07506.6 gi|15668489|ref|NP_247287.1| - 0.006 16.4 0.0 2.9 7.7 0.0 2.2 2 0 0 2 2 2 1 RepB plasmid partitioning protein HTH_36 PF13730.1 gi|15668489|ref|NP_247287.1| - 0.011 15.8 1.8 1.3 9.1 0.0 3.1 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|15668489|ref|NP_247287.1| - 0.012 15.4 0.0 0.76 9.6 0.0 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain MerR_1 PF13411.1 gi|15668489|ref|NP_247287.1| - 0.014 15.1 0.4 3 7.6 0.0 3.2 3 0 0 3 3 3 0 MerR HTH family regulatory protein HTH_Mga PF08280.6 gi|15668489|ref|NP_247287.1| - 0.018 14.8 1.3 1.7 8.4 0.1 3.0 3 0 0 3 3 2 0 M protein trans-acting positive regulator (MGA) HTH domain Endonuc_subdom PF09062.5 gi|15668489|ref|NP_247287.1| - 0.025 15.2 8.4 0.5 11.1 0.2 2.4 1 1 1 2 2 2 0 PI-PfuI Endonuclease subdomain HTH_20 PF12840.2 gi|15668489|ref|NP_247287.1| - 0.034 13.9 0.0 0.76 9.6 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.1 gi|15668489|ref|NP_247287.1| - 0.044 13.3 0.1 0.18 11.4 0.0 1.9 1 1 1 2 2 2 0 PucR C-terminal helix-turn-helix domain HTH_22 PF13309.1 gi|15668489|ref|NP_247287.1| - 0.049 13.4 0.1 3.1 7.6 0.0 2.9 2 0 0 2 2 2 0 HTH domain NUMOD1 PF07453.8 gi|15668489|ref|NP_247287.1| - 0.053 13.3 14.0 0.97 9.3 0.0 4.6 5 0 0 5 5 3 0 NUMOD1 domain HTH_26 PF13443.1 gi|15668489|ref|NP_247287.1| - 0.061 13.5 0.6 1.4 9.1 0.1 2.6 2 1 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Phage_terminase PF10668.4 gi|15668489|ref|NP_247287.1| - 0.065 13.0 0.0 15 5.4 0.0 2.6 2 0 0 2 2 2 0 Phage terminase small subunit TrmB PF01978.14 gi|15668489|ref|NP_247287.1| - 0.066 12.9 4.2 6 6.6 0.0 4.0 5 0 0 5 5 4 0 Sugar-specific transcriptional regulator TrmB DXP_synthase_N PF13292.1 gi|15668489|ref|NP_247287.1| - 0.071 12.0 0.3 0.11 11.3 0.2 1.5 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase HTH_32 PF13565.1 gi|15668489|ref|NP_247287.1| - 0.071 13.9 0.1 0.43 11.4 0.0 2.2 1 1 0 2 2 1 0 Homeodomain-like domain SpoIIID PF12116.3 gi|15668489|ref|NP_247287.1| - 0.088 12.7 1.0 1.2 9.1 0.0 2.7 3 0 0 3 3 2 0 Stage III sporulation protein D HTH_37 PF13744.1 gi|15668489|ref|NP_247287.1| - 0.092 12.5 0.0 0.65 9.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Crp PF00325.15 gi|15668489|ref|NP_247287.1| - 0.15 11.5 0.2 14 5.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family RepA_N PF06970.6 gi|15668489|ref|NP_247287.1| - 0.44 10.3 4.6 8.5 6.2 0.0 3.7 3 0 0 3 3 3 0 Replication initiator protein A (RepA) N-terminus TetR_C_8 PF14278.1 gi|15668489|ref|NP_247287.1| - 1.9 8.9 8.3 0.11 12.9 0.9 2.5 3 0 0 3 3 2 0 Transcriptional regulator C-terminal region AdoMet_dc PF02675.10 gi|15668490|ref|NP_247288.1| - 4.3e-39 132.6 0.0 4.9e-39 132.4 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase PvlArgDC PF01862.11 gi|15668491|ref|NP_247289.1| - 3.2e-49 166.6 0.0 3.6e-49 166.5 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) FTR_C PF02741.10 gi|15668493|ref|NP_247291.1| - 2.1e-69 232.0 3.8 3.4e-69 231.4 2.6 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.13 gi|15668493|ref|NP_247291.1| - 1.3e-66 222.7 0.9 4.2e-66 221.0 0.0 2.2 3 0 0 3 3 3 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF2981 PF11200.3 gi|15668493|ref|NP_247291.1| - 0.073 12.1 0.0 0.097 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) DUF211 PF02680.9 gi|15668494|ref|NP_247292.1| - 2.9e-43 145.5 3.7 3.2e-43 145.4 2.6 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 BRCT PF00533.21 gi|15668494|ref|NP_247292.1| - 0.0098 16.0 0.1 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain ArsA_ATPase PF02374.10 gi|15668494|ref|NP_247292.1| - 0.045 12.7 0.2 0.053 12.5 0.1 1.0 1 0 0 1 1 1 0 Anion-transporting ATPase PilN PF05137.8 gi|15668494|ref|NP_247292.1| - 0.059 13.1 0.0 0.069 12.9 0.0 1.2 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) B5 PF03484.10 gi|15668494|ref|NP_247292.1| - 0.081 12.7 0.8 0.33 10.7 0.3 2.1 1 1 0 1 1 1 0 tRNA synthetase B5 domain HMA PF00403.21 gi|15668494|ref|NP_247292.1| - 0.096 12.8 1.7 0.14 12.3 0.8 1.6 1 1 0 1 1 1 0 Heavy-metal-associated domain YabP PF07873.6 gi|15668494|ref|NP_247292.1| - 0.12 11.9 1.9 0.17 11.4 1.3 1.4 1 0 0 1 1 1 0 YabP family DUF1664 PF07889.7 gi|15668494|ref|NP_247292.1| - 0.15 11.9 0.3 0.2 11.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) MMR_HSR1 PF01926.18 gi|15668495|ref|NP_247293.1| - 3.8e-16 59.0 0.0 5.8e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15668495|ref|NP_247293.1| - 1.9e-10 40.2 0.1 1.7e-09 37.1 0.1 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B DUF258 PF03193.11 gi|15668495|ref|NP_247293.1| - 0.00033 19.8 0.1 0.0014 17.8 0.1 2.1 2 1 0 2 2 2 1 Protein of unknown function, DUF258 GTP_EFTU PF00009.22 gi|15668495|ref|NP_247293.1| - 0.00055 19.4 0.3 0.036 13.5 0.0 2.6 2 2 0 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.5 gi|15668495|ref|NP_247293.1| - 0.00059 19.1 0.1 0.0014 17.9 0.0 1.7 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Miro PF08477.8 gi|15668495|ref|NP_247293.1| - 0.0017 18.8 0.7 0.0076 16.7 0.5 2.2 1 1 0 1 1 1 1 Miro-like protein AAA_17 PF13207.1 gi|15668495|ref|NP_247293.1| - 0.0021 18.8 0.5 0.0038 18.0 0.3 1.6 1 1 0 1 1 1 1 AAA domain Septin PF00735.13 gi|15668495|ref|NP_247293.1| - 0.0075 15.3 0.1 0.019 13.9 0.1 1.9 1 1 0 1 1 1 1 Septin Dynamin_N PF00350.18 gi|15668495|ref|NP_247293.1| - 0.0097 15.7 0.4 0.2 11.4 0.2 2.3 1 1 0 1 1 1 1 Dynamin family ABC_tran PF00005.22 gi|15668495|ref|NP_247293.1| - 0.033 14.5 0.1 0.051 13.8 0.1 1.4 1 1 0 1 1 1 0 ABC transporter ArgK PF03308.11 gi|15668495|ref|NP_247293.1| - 0.033 12.9 1.8 0.22 10.2 0.0 2.4 3 0 0 3 3 3 0 ArgK protein MobB PF03205.9 gi|15668495|ref|NP_247293.1| - 0.035 13.8 0.2 0.076 12.7 0.2 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Arch_ATPase PF01637.13 gi|15668495|ref|NP_247293.1| - 0.048 13.3 2.6 0.14 11.7 0.9 2.1 1 1 1 2 2 2 0 Archaeal ATPase Ras PF00071.17 gi|15668495|ref|NP_247293.1| - 0.053 12.9 1.0 0.65 9.3 0.1 2.3 2 1 0 2 2 2 0 Ras family FixP_N PF14715.1 gi|15668495|ref|NP_247293.1| - 0.066 12.6 0.1 0.16 11.3 0.1 1.7 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP G-alpha PF00503.15 gi|15668495|ref|NP_247293.1| - 0.066 11.8 0.1 0.13 10.9 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit HTH_26 PF13443.1 gi|15668495|ref|NP_247293.1| - 0.074 13.2 0.0 0.19 11.9 0.0 1.7 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain FtsK_SpoIIIE PF01580.13 gi|15668495|ref|NP_247293.1| - 0.1 12.0 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family DAP3 PF10236.4 gi|15668495|ref|NP_247293.1| - 0.12 11.2 0.1 0.2 10.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_29 PF13555.1 gi|15668495|ref|NP_247293.1| - 0.13 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC-3 PF00950.12 gi|15668496|ref|NP_247294.1| - 0.004 16.4 3.3 0.0066 15.7 2.1 1.4 1 1 0 1 1 1 1 ABC 3 transport family TauE PF01925.14 gi|15668496|ref|NP_247294.1| - 0.0043 16.5 0.9 0.0062 16.0 0.6 1.2 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE EamA PF00892.15 gi|15668496|ref|NP_247294.1| - 0.01 15.9 1.0 0.01 15.9 0.7 2.2 1 1 0 2 2 2 1 EamA-like transporter family DUF4199 PF13858.1 gi|15668496|ref|NP_247294.1| - 0.018 14.9 0.6 0.018 14.9 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) YfhO PF09586.5 gi|15668496|ref|NP_247294.1| - 0.019 13.0 0.1 0.027 12.5 0.1 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO O-antigen_lig PF13425.1 gi|15668496|ref|NP_247294.1| - 0.12 12.3 7.9 0.21 11.5 5.5 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein DUF3413 PF11893.3 gi|15668496|ref|NP_247294.1| - 0.24 10.2 2.5 0.26 10.1 1.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3413) Permease PF02405.11 gi|15668496|ref|NP_247294.1| - 0.3 10.5 0.0 0.3 10.5 0.0 2.7 2 1 0 3 3 3 0 Permease CbiQ PF02361.11 gi|15668496|ref|NP_247294.1| - 0.64 9.5 6.8 5.4 6.5 0.0 2.0 2 0 0 2 2 2 0 Cobalt transport protein TctB PF07331.6 gi|15668496|ref|NP_247294.1| - 7.5 6.1 9.6 15 5.2 4.1 2.2 1 1 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family Papilloma_E5A PF05776.7 gi|15668496|ref|NP_247294.1| - 7.9 6.7 10.5 3 8.0 4.2 2.0 2 0 0 2 2 2 0 Papillomavirus E5A protein Ribosomal_S10 PF00338.17 gi|15668497|ref|NP_247295.1| - 8.7e-32 108.8 0.2 9.7e-32 108.6 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|15668498|ref|NP_247296.1| - 1e-57 194.6 0.0 1.4e-57 194.1 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|15668498|ref|NP_247296.1| - 1.1e-31 108.9 2.1 2.2e-31 107.9 0.2 2.4 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|15668498|ref|NP_247296.1| - 4.6e-19 68.3 0.6 2.8e-18 65.7 0.4 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|15668498|ref|NP_247296.1| - 4.9e-09 36.1 0.0 9.1e-09 35.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.1 gi|15668498|ref|NP_247296.1| - 2.6e-07 30.1 0.3 6.3e-07 28.9 0.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Miro PF08477.8 gi|15668498|ref|NP_247296.1| - 4.4e-06 27.1 0.0 2.5e-05 24.7 0.0 2.3 2 1 0 2 2 2 1 Miro-like protein Gtr1_RagA PF04670.7 gi|15668498|ref|NP_247296.1| - 3.6e-05 23.0 0.3 6.1e-05 22.2 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region FeoB_N PF02421.13 gi|15668498|ref|NP_247296.1| - 0.00047 19.4 1.4 0.0033 16.7 0.6 2.4 2 1 0 2 2 2 1 Ferrous iron transport protein B PduV-EutP PF10662.4 gi|15668498|ref|NP_247296.1| - 0.0011 18.5 0.5 0.017 14.6 0.2 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Ras PF00071.17 gi|15668498|ref|NP_247296.1| - 0.0017 17.7 0.2 0.0042 16.4 0.2 1.7 1 0 0 1 1 1 1 Ras family CbiA PF01656.18 gi|15668498|ref|NP_247296.1| - 0.0022 17.4 0.1 0.0051 16.2 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Arf PF00025.16 gi|15668498|ref|NP_247296.1| - 0.0032 16.7 0.4 0.018 14.2 0.1 2.3 3 0 0 3 3 3 1 ADP-ribosylation factor family Dynamin_N PF00350.18 gi|15668498|ref|NP_247296.1| - 0.017 14.9 0.4 2.5 7.9 0.1 2.7 2 1 0 2 2 2 0 Dynamin family SRPRB PF09439.5 gi|15668498|ref|NP_247296.1| - 0.024 13.8 0.2 0.092 11.9 0.1 2.0 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit FMN_dh PF01070.13 gi|15668498|ref|NP_247296.1| - 0.079 11.7 0.1 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 FMN-dependent dehydrogenase SHOCT PF09851.4 gi|15668498|ref|NP_247296.1| - 0.15 11.5 3.4 1.4 8.5 0.6 3.0 3 0 0 3 3 3 0 Short C-terminal domain cobW PF02492.14 gi|15668498|ref|NP_247296.1| - 0.17 11.2 1.0 0.28 10.5 0.2 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Cys_rich_CPCC PF14206.1 gi|298575371|ref|YP_003727983.1| - 0.0067 15.9 0.1 0.011 15.2 0.1 1.3 1 0 0 1 1 1 1 Cysteine-rich CPCC GTP_EFTU_D2 PF03144.20 gi|15668499|ref|NP_247297.1| - 3.3e-12 46.3 0.5 1.3e-11 44.4 0.2 2.1 1 1 1 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|15668499|ref|NP_247297.1| - 5.5e-07 29.1 1.9 2.8e-06 26.8 0.1 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 4 eIF2_C PF09173.6 gi|15668499|ref|NP_247297.1| - 0.00021 21.2 1.0 0.0005 20.0 0.1 2.1 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal Xan_ur_permease PF00860.15 gi|15668500|ref|NP_247298.1| - 4.3e-58 196.6 48.6 5.1e-58 196.4 33.7 1.1 1 0 0 1 1 1 1 Permease family Nitro_FeMo-Co PF02579.12 gi|15668501|ref|NP_247299.1| - 9.5e-12 44.8 0.2 1.5e-11 44.1 0.2 1.3 1 1 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor CAP_assoc_N PF14504.1 gi|15668501|ref|NP_247299.1| - 0.048 13.3 1.6 0.058 13.1 1.1 1.1 1 0 0 1 1 1 0 CAP-associated N-terminal RBB1NT PF08169.6 gi|15668501|ref|NP_247299.1| - 0.12 12.3 0.6 0.21 11.5 0.4 1.5 1 1 0 1 1 1 0 RBB1NT (NUC162) domain Clr5 PF14420.1 gi|15668502|ref|NP_247300.1| - 0.0049 16.7 0.2 0.013 15.3 0.1 1.9 1 1 0 1 1 1 1 Clr5 domain HTH_32 PF13565.1 gi|15668502|ref|NP_247300.1| - 0.019 15.7 0.0 0.072 13.8 0.0 1.9 3 0 0 3 3 3 0 Homeodomain-like domain Terminase_5 PF06056.7 gi|15668502|ref|NP_247300.1| - 0.021 14.3 0.1 0.055 13.0 0.1 1.7 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) HTH_12 PF08461.5 gi|15668502|ref|NP_247300.1| - 0.049 13.3 0.2 0.15 11.8 0.1 1.8 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain DUF1829 PF08862.5 gi|15668502|ref|NP_247300.1| - 0.052 13.8 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF1829 Imm6 PF14434.1 gi|15668502|ref|NP_247300.1| - 0.14 11.8 3.6 0.38 10.4 0.3 2.6 2 1 1 3 3 3 0 Immunity protein Imm6 RecR PF02132.10 gi|15668502|ref|NP_247300.1| - 0.26 10.7 1.1 2.1 7.8 0.1 2.5 2 0 0 2 2 2 0 RecR protein Phage_Mu_F PF04233.9 gi|15668503|ref|NP_247301.1| - 3e-24 85.6 0.0 7.3e-24 84.4 0.0 1.7 1 0 0 1 1 1 1 Phage Mu protein F like protein Hydrolase_3 PF08282.7 gi|15668503|ref|NP_247301.1| - 0.0012 18.4 2.0 0.0044 16.6 1.4 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_tail_S PF05069.8 gi|15668505|ref|NP_247303.1| - 1.9e-09 37.4 0.2 2.4e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 Phage virion morphogenesis family HK97-gp10_like PF04883.7 gi|15668505|ref|NP_247303.1| - 0.00089 20.1 5.3 0.0093 16.8 1.6 2.5 2 1 0 2 2 2 1 Bacteriophage HK97-gp10, putative tail-component YtxC PF08812.6 gi|15668505|ref|NP_247303.1| - 0.0067 15.9 0.0 0.0086 15.5 0.0 1.3 1 1 0 1 1 1 1 YtxC-like family HTH_23 PF13384.1 gi|15668506|ref|NP_247304.1| - 0.015 14.9 0.0 0.027 14.1 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF4131 PF13567.1 gi|15668507|ref|NP_247305.1| - 0.0028 17.1 0.0 0.0034 16.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) DUF1385 PF07136.6 gi|15668507|ref|NP_247305.1| - 0.083 11.9 0.1 0.095 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) YMF19 PF02326.10 gi|15668507|ref|NP_247305.1| - 0.085 13.4 0.1 0.085 13.4 0.1 1.8 1 1 1 2 2 2 0 Plant ATP synthase F0 DUF1426 PF07234.6 gi|15668507|ref|NP_247305.1| - 0.13 12.0 2.7 0.17 11.6 0.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1426) YqzM PF14141.1 gi|15668507|ref|NP_247305.1| - 2.9 7.7 5.7 11 5.9 0.1 2.3 2 0 0 2 2 2 0 YqzM-like protein DUF4227 PF14004.1 gi|15668507|ref|NP_247305.1| - 4.2 7.2 5.5 12 5.7 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4227) HTH_26 PF13443.1 gi|15668508|ref|NP_247306.1| - 0.0038 17.3 0.1 0.0069 16.5 0.0 1.5 1 1 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain DUF2119 PF09892.4 gi|15668508|ref|NP_247306.1| - 0.0047 16.2 0.2 0.0078 15.5 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) HTH_3 PF01381.17 gi|15668508|ref|NP_247306.1| - 0.012 15.4 0.1 0.021 14.6 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.2 gi|15668508|ref|NP_247306.1| - 0.016 15.2 0.1 0.026 14.5 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Arch_ATPase PF01637.13 gi|15668508|ref|NP_247306.1| - 0.028 14.1 0.1 0.033 13.8 0.1 1.0 1 0 0 1 1 1 0 Archaeal ATPase KH_2 PF07650.12 gi|15668508|ref|NP_247306.1| - 0.5 9.9 2.7 0.37 10.3 1.0 1.6 2 1 0 2 2 2 0 KH domain DivIC PF04977.10 gi|15668509|ref|NP_247307.1| - 9e-05 21.8 4.5 9e-05 21.8 3.1 2.1 1 1 0 2 2 2 1 Septum formation initiator TMF_DNA_bd PF12329.3 gi|15668509|ref|NP_247307.1| - 0.002 17.8 3.3 0.002 17.8 2.3 2.0 2 0 0 2 2 2 1 TATA element modulatory factor 1 DNA binding RTBV_P46 PF06216.6 gi|15668509|ref|NP_247307.1| - 0.0032 16.3 0.8 0.0039 16.0 0.6 1.0 1 0 0 1 1 1 1 Rice tungro bacilliform virus P46 protein Bap31 PF05529.7 gi|15668509|ref|NP_247307.1| - 0.0036 16.7 4.4 0.0044 16.5 3.0 1.1 1 0 0 1 1 1 1 B-cell receptor-associated protein 31-like SlyX PF04102.7 gi|15668509|ref|NP_247307.1| - 0.005 17.1 0.2 0.0087 16.4 0.1 1.5 1 1 0 1 1 1 1 SlyX AAA_13 PF13166.1 gi|15668509|ref|NP_247307.1| - 0.005 15.3 4.0 0.0055 15.2 2.7 1.0 1 0 0 1 1 1 1 AAA domain Atg14 PF10186.4 gi|15668509|ref|NP_247307.1| - 0.0052 15.7 2.2 0.006 15.5 1.5 1.1 1 0 0 1 1 1 1 UV radiation resistance protein and autophagy-related subunit 14 TPD52 PF04201.10 gi|15668509|ref|NP_247307.1| - 0.0057 16.3 1.9 0.0069 16.1 1.3 1.3 1 0 0 1 1 1 1 Tumour protein D52 family DUF641 PF04859.7 gi|15668509|ref|NP_247307.1| - 0.0059 16.3 0.9 0.0074 16.0 0.6 1.2 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) ERM PF00769.14 gi|15668509|ref|NP_247307.1| - 0.0066 16.0 6.9 0.0078 15.7 4.8 1.0 1 0 0 1 1 1 1 Ezrin/radixin/moesin family DUF2730 PF10805.3 gi|15668509|ref|NP_247307.1| - 0.0069 16.1 1.0 0.0087 15.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) Spc7 PF08317.6 gi|15668509|ref|NP_247307.1| - 0.0094 14.6 3.9 0.011 14.4 2.7 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF16 PF01519.11 gi|15668509|ref|NP_247307.1| - 0.013 15.7 1.5 0.016 15.4 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 ATG16 PF08614.6 gi|15668509|ref|NP_247307.1| - 0.014 15.1 3.9 0.016 15.0 2.7 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) IncA PF04156.9 gi|15668509|ref|NP_247307.1| - 0.023 14.3 0.8 0.027 14.0 0.6 1.1 1 0 0 1 1 1 0 IncA protein PEARLI-4 PF05278.7 gi|15668509|ref|NP_247307.1| - 0.025 13.9 8.5 0.085 12.2 5.9 1.8 1 1 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF1319 PF07028.6 gi|15668509|ref|NP_247307.1| - 0.026 14.7 2.2 0.031 14.4 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1319) Fib_alpha PF08702.5 gi|15668509|ref|NP_247307.1| - 0.027 14.5 1.6 0.03 14.4 1.1 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family CENP-Q PF13094.1 gi|15668509|ref|NP_247307.1| - 0.062 13.3 2.0 0.077 13.0 1.4 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit FemAB PF02388.11 gi|15668509|ref|NP_247307.1| - 0.077 11.6 3.1 0.09 11.4 2.2 1.0 1 0 0 1 1 1 0 FemAB family UPF0449 PF15136.1 gi|15668509|ref|NP_247307.1| - 0.082 13.1 1.7 0.11 12.7 1.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 Vps51 PF08700.6 gi|15668509|ref|NP_247307.1| - 0.095 12.5 2.7 0.12 12.2 1.5 1.5 1 1 0 1 1 1 0 Vps51/Vps67 DUF1640 PF07798.6 gi|15668509|ref|NP_247307.1| - 0.1 12.6 2.6 0.13 12.2 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) HR1 PF02185.11 gi|15668509|ref|NP_247307.1| - 0.11 12.3 3.7 0.15 11.8 2.5 1.4 1 1 0 1 1 1 0 Hr1 repeat DUF2600 PF10776.4 gi|15668509|ref|NP_247307.1| - 0.11 11.3 0.2 0.13 11.0 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) IATP PF04568.7 gi|15668509|ref|NP_247307.1| - 0.11 12.5 8.8 0.16 11.9 6.1 1.4 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP FlaC_arch PF05377.6 gi|15668509|ref|NP_247307.1| - 0.23 11.4 2.6 0.27 11.1 1.1 1.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4140 PF13600.1 gi|15668509|ref|NP_247307.1| - 0.25 11.7 2.7 0.34 11.3 1.8 1.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) V_ATPase_I PF01496.14 gi|15668509|ref|NP_247307.1| - 0.27 9.0 1.6 0.32 8.7 1.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1433 PF07252.6 gi|15668509|ref|NP_247307.1| - 0.44 10.7 2.7 0.59 10.3 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1433) AKNA PF12443.3 gi|15668509|ref|NP_247307.1| - 0.62 10.1 3.3 1.3 9.1 2.3 1.5 1 1 0 1 1 1 0 AT-hook-containing transcription factor Med9 PF07544.8 gi|15668509|ref|NP_247307.1| - 0.9 9.3 5.9 1.1 9.0 3.6 1.6 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 AAA_23 PF13476.1 gi|15668509|ref|NP_247307.1| - 1.9 8.7 7.4 2.3 8.4 5.1 1.1 1 0 0 1 1 1 0 AAA domain RBD-FIP PF09457.5 gi|15668509|ref|NP_247307.1| - 3.4 7.5 8.3 4.3 7.2 3.4 2.4 1 1 1 2 2 2 0 FIP domain DUF1492 PF07374.6 gi|15668509|ref|NP_247307.1| - 7.6 6.7 6.8 8.4 6.5 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1492) DUF2748 PF10871.3 gi|15668510|ref|NP_247308.1| - 0.32 9.3 4.6 2.2 6.5 3.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2748) eIF-4B PF06273.6 gi|15668510|ref|NP_247308.1| - 0.36 9.5 5.7 0.46 9.1 4.0 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Hom_end_hint PF05203.11 gi|15668510|ref|NP_247308.1| - 0.44 10.2 3.8 0.62 9.7 2.7 1.1 1 0 0 1 1 1 0 Hom_end-associated Hint IncA PF04156.9 gi|15668510|ref|NP_247308.1| - 2 8.0 6.3 2.6 7.6 4.4 1.1 1 0 0 1 1 1 0 IncA protein Linocin_M18 PF04454.7 gi|15668512|ref|NP_247310.1| - 0.00011 21.1 0.6 0.00037 19.4 0.4 1.8 1 1 0 1 1 1 1 Encapsulating protein for peroxidase DUF2922 PF11148.3 gi|15668512|ref|NP_247310.1| - 0.068 12.8 0.9 1.2 8.8 0.0 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2922) DUF3502 PF12010.3 gi|15668514|ref|NP_247312.1| - 0.22 11.5 0.7 3.4 7.6 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3502) DUF2460 PF09343.5 gi|15668515|ref|NP_247313.1| - 0.0017 17.7 0.1 0.0098 15.2 0.0 2.3 2 1 0 2 2 2 1 Conserved hypothetical protein 2217 (DUF2460) HsdM_N PF12161.3 gi|15668516|ref|NP_247314.1| - 0.06 13.7 2.4 0.13 12.6 1.6 1.5 1 1 0 1 1 1 0 HsdM N-terminal domain UCH PF00443.24 gi|15668516|ref|NP_247314.1| - 0.077 12.0 0.5 0.087 11.9 0.3 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Kei1 PF08552.6 gi|15668517|ref|NP_247315.1| - 0.026 14.2 1.7 0.046 13.3 1.2 1.4 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 PhageMin_Tail PF10145.4 gi|15668518|ref|NP_247316.1| - 0.00042 20.0 18.9 0.0009 18.9 7.5 4.0 3 1 0 3 3 3 1 Phage-related minor tail protein Dioxygenase_N PF04444.9 gi|15668518|ref|NP_247316.1| - 0.0083 16.0 0.2 0.91 9.5 0.0 4.1 3 1 1 4 4 4 1 Catechol dioxygenase N terminus AAA_32 PF13654.1 gi|15668518|ref|NP_247316.1| - 0.031 12.9 19.4 0.0079 14.9 1.5 3.3 3 0 0 3 3 3 0 AAA domain Recep_L_domain PF01030.19 gi|15668518|ref|NP_247316.1| - 0.078 12.9 7.4 0.25 11.3 5.1 1.9 1 0 0 1 1 1 0 Receptor L domain Mor PF08765.6 gi|15668518|ref|NP_247316.1| - 0.37 10.5 4.0 0.5 10.1 0.0 3.1 3 0 0 3 3 3 0 Mor transcription activator family VIT1 PF01988.14 gi|15668518|ref|NP_247316.1| - 0.85 9.0 5.5 6.4 6.2 0.0 3.5 4 0 0 4 4 4 0 VIT family COG5 PF10392.4 gi|15668518|ref|NP_247316.1| - 1.4 8.8 10.6 0.72 9.8 3.0 3.3 2 1 1 3 3 3 0 Golgi transport complex subunit 5 Tup_N PF08581.5 gi|15668518|ref|NP_247316.1| - 4.1 7.6 18.7 0.8 9.9 3.3 5.3 4 1 1 5 5 5 0 Tup N-terminal Prominin PF05478.6 gi|15668518|ref|NP_247316.1| - 7.2 4.0 17.9 0.81 7.1 7.4 2.4 3 0 0 3 3 3 0 Prominin Lipoprotein_17 PF04200.7 gi|15668519|ref|NP_247317.1| - 0.34 11.0 7.1 6.7 6.9 2.0 2.3 1 1 1 2 2 2 0 Lipoprotein associated domain KH_1 PF00013.24 gi|15668519|ref|NP_247317.1| - 1.1 8.9 3.4 0.48 10.1 0.2 2.0 2 0 0 2 2 2 0 KH domain Big_2 PF02368.13 gi|15668519|ref|NP_247317.1| - 1.8 8.4 4.8 2.9 7.8 0.1 2.4 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 2) VP4_2 PF08935.5 gi|15668520|ref|NP_247318.1| - 0.4 11.3 7.1 1.4 9.5 4.9 1.9 1 0 0 1 1 1 0 Viral protein VP4 subunit DUF1953 PF09196.5 gi|15668521|ref|NP_247319.1| - 0.06 13.0 1.4 1.7 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1953) Terminase_1 PF03354.10 gi|15668522|ref|NP_247320.1| - 0.077 11.3 0.0 0.09 11.1 0.0 1.1 1 0 0 1 1 1 0 Phage Terminase DUF999 PF06198.6 gi|15668525|ref|NP_247323.1| - 0.0049 16.6 0.1 0.006 16.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF999) DUF4358 PF14270.1 gi|15668525|ref|NP_247323.1| - 0.068 13.0 3.5 0.07 13.0 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4358) DUF469 PF04320.9 gi|15668525|ref|NP_247323.1| - 0.095 13.4 0.2 0.12 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein with unknown function (DUF469) DUF947 PF06102.7 gi|15668525|ref|NP_247323.1| - 0.21 11.4 3.6 0.24 11.1 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF947) MecA_N PF05223.6 gi|15668525|ref|NP_247323.1| - 0.45 10.6 3.6 0.68 10.0 2.5 1.4 1 1 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain DUF3782 PF12644.2 gi|15668525|ref|NP_247323.1| - 2.2 8.1 6.4 2.8 7.8 4.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) DUF837 PF05769.6 gi|15668526|ref|NP_247324.1| - 0.0041 16.6 2.6 0.0049 16.4 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF837) bZIP_2 PF07716.10 gi|15668526|ref|NP_247324.1| - 0.022 14.5 0.3 0.022 14.5 0.2 2.1 2 1 0 2 2 2 0 Basic region leucine zipper NYD-SP28_assoc PF14775.1 gi|15668526|ref|NP_247324.1| - 0.056 13.1 0.4 0.14 11.9 0.3 1.6 1 0 0 1 1 1 0 Sperm tail C-terminal domain CorA PF01544.13 gi|15668526|ref|NP_247324.1| - 0.062 12.3 0.7 0.067 12.2 0.5 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Leu_zip PF15294.1 gi|15668526|ref|NP_247324.1| - 0.14 11.2 3.8 0.16 11.0 2.6 1.0 1 0 0 1 1 1 0 Leucine zipper M_domain PF12938.2 gi|15668526|ref|NP_247324.1| - 0.14 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 M domain of GW182 DUF465 PF04325.8 gi|15668526|ref|NP_247324.1| - 0.52 10.0 6.7 0.54 9.9 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF465) TBPIP PF07106.8 gi|15668526|ref|NP_247324.1| - 0.55 9.7 5.6 1.3 8.5 3.9 1.5 1 1 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) TSC22 PF01166.13 gi|15668526|ref|NP_247324.1| - 2.8 7.9 7.0 3 7.8 0.3 2.6 2 1 0 2 2 2 0 TSC-22/dip/bun family Carn_acyltransf PF00755.15 gi|15668527|ref|NP_247325.1| - 0.0016 16.6 0.0 0.002 16.3 0.0 1.0 1 0 0 1 1 1 1 Choline/Carnitine o-acyltransferase Ufd2P_core PF10408.4 gi|15668527|ref|NP_247325.1| - 0.011 13.9 0.1 0.016 13.4 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin elongating factor core DUF2203 PF09969.4 gi|15668527|ref|NP_247325.1| - 0.1 12.7 0.0 0.17 12.1 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) ATP-synt_Eps PF04627.8 gi|15668528|ref|NP_247326.1| - 0.037 13.5 0.0 0.12 11.9 0.0 1.9 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain TBPIP PF07106.8 gi|15668528|ref|NP_247326.1| - 0.048 13.2 7.7 0.09 12.3 5.1 1.6 1 1 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Remorin_C PF03763.8 gi|15668528|ref|NP_247326.1| - 1.8 8.0 9.8 16 5.0 6.2 2.2 1 1 1 2 2 2 0 Remorin, C-terminal region FliS PF02561.9 gi|15668530|ref|NP_247328.1| - 0.0056 16.5 0.1 0.0062 16.3 0.0 1.0 1 0 0 1 1 1 1 Flagellar protein FliS DUF4398 PF14346.1 gi|15668530|ref|NP_247328.1| - 0.0093 16.0 0.0 0.0096 15.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4398) bPH_4 PF06713.6 gi|15668532|ref|NP_247330.1| - 0.079 12.8 0.2 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial PH domain SecB PF02556.9 gi|15668533|ref|NP_247331.1| - 3.4e-24 85.1 1.3 4.1e-24 84.8 0.9 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB Orthopox_B11R PF07033.6 gi|15668533|ref|NP_247331.1| - 0.023 14.1 4.4 0.023 14.1 3.1 2.2 2 0 0 2 2 2 0 Orthopoxvirus B11R protein DUF3600 PF12207.3 gi|15668534|ref|NP_247332.1| - 0.0027 17.2 0.3 0.0042 16.6 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3600) Tox-ART-HYD1 PF15633.1 gi|15668535|ref|NP_247333.1| - 0.006 17.3 0.2 0.023 15.4 0.0 2.0 2 0 0 2 2 2 1 HYD1 signature containing ADP-ribosyltransferase DUF3990 PF13151.1 gi|15668535|ref|NP_247333.1| - 0.03 13.7 1.1 0.076 12.3 0.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3990) PARP PF00644.15 gi|15668535|ref|NP_247333.1| - 0.043 13.2 0.1 0.15 11.4 0.0 1.8 2 0 0 2 2 2 0 Poly(ADP-ribose) polymerase catalytic domain DUF2393 PF09624.5 gi|15668536|ref|NP_247334.1| - 0.0034 16.9 0.0 0.005 16.3 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2393) DUF3426 PF11906.3 gi|15668536|ref|NP_247334.1| - 0.036 13.7 0.0 0.074 12.7 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3426) HTH_45 PF14947.1 gi|15668537|ref|NP_247335.1| - 9.8e-07 28.5 0.0 2e-06 27.5 0.0 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.9 gi|15668537|ref|NP_247335.1| - 2.7e-06 27.0 0.0 1.4e-05 24.7 0.0 2.0 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HxlR PF01638.12 gi|15668537|ref|NP_247335.1| - 1e-05 25.0 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TrmB PF01978.14 gi|15668537|ref|NP_247335.1| - 2.9e-05 23.6 0.0 4.1e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|15668537|ref|NP_247335.1| - 0.00096 19.1 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|15668537|ref|NP_247335.1| - 0.00097 18.7 1.3 0.0012 18.5 0.0 1.8 2 1 1 3 3 2 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.15 gi|15668537|ref|NP_247335.1| - 0.0024 17.9 0.0 0.004 17.2 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.12 gi|15668537|ref|NP_247335.1| - 0.0026 17.2 0.2 0.0032 16.9 0.1 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit FeoC PF09012.5 gi|15668537|ref|NP_247335.1| - 0.0085 15.7 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_20 PF12840.2 gi|15668537|ref|NP_247335.1| - 0.016 14.9 0.0 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.17 gi|15668537|ref|NP_247335.1| - 0.017 14.7 0.0 0.037 13.7 0.0 1.5 2 0 0 2 2 1 0 MarR family DsrD PF08679.6 gi|15668537|ref|NP_247335.1| - 0.026 14.4 0.2 0.062 13.3 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) HTH_27 PF13463.1 gi|15668537|ref|NP_247335.1| - 0.035 14.4 0.0 0.066 13.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|15668537|ref|NP_247335.1| - 0.046 13.3 0.0 2.6 7.6 0.0 2.5 2 1 0 2 2 2 0 IclR helix-turn-helix domain HTH_Mga PF08280.6 gi|15668537|ref|NP_247335.1| - 0.06 13.1 0.1 0.13 12.0 0.1 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain mTERF PF02536.9 gi|15668537|ref|NP_247335.1| - 0.071 11.6 0.0 0.074 11.6 0.0 1.1 1 0 0 1 1 1 0 mTERF MBD PF01429.14 gi|15668537|ref|NP_247335.1| - 0.1 12.1 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyl-CpG binding domain PCI PF01399.22 gi|15668537|ref|NP_247335.1| - 0.11 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 PCI domain MarR_2 PF12802.2 gi|15668537|ref|NP_247335.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF4049 PF13258.1 gi|15668537|ref|NP_247335.1| - 0.12 11.3 0.4 0.17 10.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4049) DUF2080 PF09853.4 gi|15668538|ref|NP_247336.1| - 1.3e-25 88.8 0.4 1.6e-25 88.5 0.2 1.1 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) MCM PF00493.18 gi|15668539|ref|NP_247337.1| - 1.1e-101 339.9 0.2 1.5e-101 339.5 0.2 1.2 1 0 0 1 1 1 1 MCM2/3/5 family Mg_chelatase PF01078.16 gi|15668539|ref|NP_247337.1| - 1.7e-06 27.3 0.1 0.001 18.2 0.0 2.6 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|15668539|ref|NP_247337.1| - 3.9e-06 26.6 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.24 gi|15668539|ref|NP_247337.1| - 0.0003 21.0 0.0 0.0013 18.9 0.0 2.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|15668539|ref|NP_247337.1| - 0.0011 18.4 0.0 0.0022 17.5 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain RPA_C PF08784.6 gi|15668539|ref|NP_247337.1| - 0.0073 16.7 0.0 0.077 13.4 0.0 2.3 2 0 0 2 2 2 1 Replication protein A C terminal RuvB_N PF05496.7 gi|15668539|ref|NP_247337.1| - 0.014 14.4 0.0 0.032 13.2 0.0 1.6 1 1 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|15668539|ref|NP_247337.1| - 0.044 13.9 0.0 0.91 9.6 0.0 3.2 3 1 0 3 3 3 0 AAA domain RNA_helicase PF00910.17 gi|15668539|ref|NP_247337.1| - 0.055 13.6 0.4 1.8 8.8 0.0 3.1 3 0 0 3 3 3 0 RNA helicase AAA_10 PF12846.2 gi|15668539|ref|NP_247337.1| - 0.058 12.8 0.2 2.5 7.4 0.0 3.1 3 1 0 3 3 3 0 AAA-like domain DUF3987 PF13148.1 gi|15668539|ref|NP_247337.1| - 0.066 11.7 0.2 0.67 8.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_3 PF07726.6 gi|15668539|ref|NP_247337.1| - 0.069 12.7 0.0 0.14 11.7 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mrr_N PF14338.1 gi|15668539|ref|NP_247337.1| - 0.087 12.9 0.0 0.43 10.6 0.0 2.2 1 0 0 1 1 1 0 Mrr N-terminal domain ABC_tran PF00005.22 gi|15668539|ref|NP_247337.1| - 0.11 12.7 0.4 33 4.7 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DUF4423 PF14394.1 gi|15668539|ref|NP_247337.1| - 1.1 8.8 0.0 1.1 8.8 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4423) GreA_GreB PF01272.14 gi|15668540|ref|NP_247338.1| - 0.12 12.0 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term RNase_H_2 PF13482.1 gi|15668541|ref|NP_247339.1| - 1.2e-19 70.7 0.4 1.4e-19 70.4 0.3 1.1 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo1 PF03104.14 gi|15668541|ref|NP_247339.1| - 3.9e-06 25.9 0.7 6.1e-06 25.3 0.5 1.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.4 gi|15668541|ref|NP_247339.1| - 4.1e-05 23.2 0.1 0.00016 21.2 0.1 1.9 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_T PF00929.19 gi|15668541|ref|NP_247339.1| - 0.009 16.3 0.2 0.02 15.1 0.0 1.7 1 1 1 2 2 2 1 Exonuclease DNA_pol_A_exo1 PF01612.15 gi|15668541|ref|NP_247339.1| - 0.016 14.7 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 3'-5' exonuclease Plant_vir_prot PF01307.12 gi|15668541|ref|NP_247339.1| - 0.11 12.2 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Plant viral movement protein DUF2540 PF10802.3 gi|15668542|ref|NP_247340.1| - 8e-31 105.5 3.9 9.4e-31 105.3 2.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2540) Flu_M1 PF00598.14 gi|15668542|ref|NP_247340.1| - 0.011 15.0 0.1 0.012 14.9 0.0 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M1) Phage_integrase PF00589.17 gi|15668543|ref|NP_247341.1| - 4.7e-36 124.0 0.1 7.7e-36 123.3 0.1 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|15668543|ref|NP_247341.1| - 7e-14 51.9 0.5 1.6e-13 50.7 0.3 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|15668543|ref|NP_247341.1| - 0.00036 20.6 1.9 0.0023 18.0 0.2 3.0 4 0 0 4 4 4 1 Phage integrase, N-terminal SAM-like domain DUF3952 PF13130.1 gi|15668544|ref|NP_247342.1| - 0.03 14.3 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3952) CKAP2_C PF15297.1 gi|15668544|ref|NP_247342.1| - 0.033 13.0 1.9 0.038 12.8 1.3 1.1 1 0 0 1 1 1 0 Cytoskeleton-associated protein 2 C-terminus TP6A_N PF04406.9 gi|15668545|ref|NP_247343.1| - 8.3e-21 73.4 0.0 1.3e-20 72.7 0.0 1.3 1 0 0 1 1 1 1 Type IIB DNA topoisomerase ALMS_motif PF15309.1 gi|15668545|ref|NP_247343.1| - 0.13 12.0 0.4 0.33 10.7 0.3 1.7 1 0 0 1 1 1 0 ALMS motif Tubulin PF00091.20 gi|15668546|ref|NP_247344.1| - 2.8e-38 131.9 2.7 2e-37 129.1 1.8 2.0 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|15668546|ref|NP_247344.1| - 1.1e-34 118.3 1.1 4.3e-34 116.4 0.8 2.1 1 0 0 1 1 1 1 FtsZ family, C-terminal domain Tubulin_2 PF13809.1 gi|15668546|ref|NP_247344.1| - 0.014 14.3 1.9 0.028 13.3 1.3 1.5 1 1 0 1 1 1 0 Tubulin like ThiF PF00899.16 gi|15668546|ref|NP_247344.1| - 0.041 13.7 0.2 0.11 12.3 0.1 1.8 2 0 0 2 2 2 0 ThiF family SecE PF00584.15 gi|15668547|ref|NP_247345.1| - 0.0054 16.2 0.0 0.0075 15.8 0.0 1.2 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex IF3_C PF00707.17 gi|15668547|ref|NP_247345.1| - 0.072 12.8 0.1 0.09 12.5 0.1 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain Spt5-NGN PF03439.8 gi|15668548|ref|NP_247346.1| - 1.3e-23 82.5 0.1 2.4e-23 81.6 0.1 1.4 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|15668548|ref|NP_247346.1| - 3.6e-10 39.1 1.3 9.2e-10 37.8 0.9 1.7 1 0 0 1 1 1 1 KOW motif NusG PF02357.14 gi|15668548|ref|NP_247346.1| - 4.8e-05 23.5 0.2 0.00061 19.9 0.0 2.6 2 1 0 2 2 2 1 Transcription termination factor nusG Ribosomal_L11_N PF03946.9 gi|15668549|ref|NP_247347.1| - 2e-25 87.9 1.1 3.6e-25 87.1 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|15668549|ref|NP_247347.1| - 2.4e-24 85.2 0.8 2.4e-24 85.2 0.6 1.5 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain HGTP_anticodon PF03129.15 gi|15668549|ref|NP_247347.1| - 0.15 12.0 0.7 0.91 9.5 0.5 2.1 1 1 0 1 1 1 0 Anticodon binding domain PAP2 PF01569.16 gi|15668550|ref|NP_247348.1| - 1.6e-29 102.2 2.8 4.6e-29 100.7 1.9 1.8 1 0 0 1 1 1 1 PAP2 superfamily SNARE_assoc PF09335.6 gi|15668550|ref|NP_247348.1| - 1.9e-17 63.5 6.7 1.9e-17 63.5 4.6 3.3 3 2 1 4 4 4 1 SNARE associated Golgi protein PAP2_3 PF14378.1 gi|15668550|ref|NP_247348.1| - 1e-05 25.1 0.3 1e-05 25.1 0.2 1.7 2 0 0 2 2 2 1 PAP2 superfamily PAP2_C PF14360.1 gi|15668550|ref|NP_247348.1| - 0.0012 19.0 2.6 0.0012 19.0 1.8 3.0 2 1 0 2 2 2 1 PAP2 superfamily C-terminal Pam17 PF08566.5 gi|15668550|ref|NP_247348.1| - 0.08 12.6 0.2 0.19 11.3 0.1 1.6 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 Wzy_C PF04932.10 gi|15668550|ref|NP_247348.1| - 8.7 6.1 12.4 1.4 8.6 0.2 2.7 3 0 0 3 3 3 0 O-Antigen ligase Cas_Cas6 PF01881.11 gi|15668551|ref|NP_247349.1| - 3.6e-43 147.4 5.6 3.6e-43 147.4 3.9 1.9 2 0 0 2 2 2 1 CRISPR associated protein Cas6 DUF2276 PF10040.4 gi|15668551|ref|NP_247349.1| - 0.021 15.0 0.3 0.6 10.3 0.1 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2276) Methyltransf_31 PF13847.1 gi|15668551|ref|NP_247349.1| - 0.023 14.2 0.1 0.041 13.4 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain DEAD PF00270.24 gi|15668552|ref|NP_247350.1| - 3.8e-09 36.2 0.0 2.7e-08 33.4 0.0 2.5 3 0 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.11 gi|15668552|ref|NP_247350.1| - 9.6e-05 21.6 0.0 0.0015 17.8 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein ResIII PF04851.10 gi|15668552|ref|NP_247350.1| - 0.00024 21.0 3.2 0.0011 18.8 0.0 3.0 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit AAA_22 PF13401.1 gi|15668552|ref|NP_247350.1| - 0.0023 18.0 0.1 0.057 13.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain Helicase_C PF00271.26 gi|15668552|ref|NP_247350.1| - 0.0048 16.7 0.0 0.017 14.9 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HD PF01966.17 gi|15668552|ref|NP_247350.1| - 0.02 14.8 0.2 0.07 13.1 0.1 2.0 1 0 0 1 1 1 0 HD domain Cas_Cas4 PF01930.12 gi|15668553|ref|NP_247351.1| - 2.3e-53 180.4 8.1 2.5e-53 180.2 5.6 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|15668553|ref|NP_247351.1| - 5.8e-06 25.8 0.6 7.2e-06 25.5 0.4 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily SOR PF07682.6 gi|15668553|ref|NP_247351.1| - 0.011 14.2 0.3 0.016 13.7 0.2 1.2 1 1 0 1 1 1 0 Sulphur oxygenase reductase Tat PF00539.13 gi|15668553|ref|NP_247351.1| - 0.035 13.7 0.4 0.067 12.8 0.3 1.5 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) DUF1284 PF06935.6 gi|15668553|ref|NP_247351.1| - 0.53 10.4 4.1 2.6 8.2 2.8 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1284) Tox-REase-9 PF15650.1 gi|15668553|ref|NP_247351.1| - 0.65 10.2 7.8 0.51 10.5 2.6 2.2 1 1 1 2 2 2 0 Restriction endonuclease fold toxin 9 Cas_Cas1 PF01867.11 gi|15668554|ref|NP_247352.1| - 1.3e-81 273.7 0.7 1.5e-81 273.5 0.5 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 HTH_24 PF13412.1 gi|15668555|ref|NP_247353.1| - 2.6e-10 39.5 0.6 4.3e-10 38.8 0.4 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|15668555|ref|NP_247353.1| - 1.5e-09 37.4 0.3 2.5e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|15668555|ref|NP_247353.1| - 2.4e-09 36.7 1.3 7e-09 35.2 0.9 1.8 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|15668555|ref|NP_247353.1| - 6.4e-08 32.1 0.8 6.4e-08 32.1 0.5 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family FeoC PF09012.5 gi|15668555|ref|NP_247353.1| - 3.6e-06 26.5 0.8 6e-06 25.8 0.6 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_20 PF12840.2 gi|15668555|ref|NP_247353.1| - 6.1e-06 25.9 0.1 8.7e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|15668555|ref|NP_247353.1| - 6.7e-06 26.1 0.6 1.5e-05 25.0 0.4 1.5 1 0 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.2 gi|15668555|ref|NP_247353.1| - 1e-05 25.0 0.0 1.4e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|15668555|ref|NP_247353.1| - 3.4e-05 23.3 0.0 5.2e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.1 gi|15668555|ref|NP_247353.1| - 3.5e-05 24.0 0.1 6.2e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|15668555|ref|NP_247353.1| - 3.7e-05 23.2 0.4 8.1e-05 22.1 0.3 1.5 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.14 gi|15668555|ref|NP_247353.1| - 0.00012 21.9 0.4 0.00024 20.9 0.3 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF2250 PF10007.4 gi|15668555|ref|NP_247353.1| - 0.00036 20.3 0.9 0.00036 20.3 0.6 1.8 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_38 PF13936.1 gi|15668555|ref|NP_247353.1| - 0.00047 19.6 0.1 0.00082 18.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.6 gi|15668555|ref|NP_247353.1| - 0.0006 19.5 1.0 0.0011 18.6 0.7 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_28 PF13518.1 gi|15668555|ref|NP_247353.1| - 0.001 19.0 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.1 gi|15668555|ref|NP_247353.1| - 0.0019 18.2 0.7 0.0043 17.1 0.1 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|15668555|ref|NP_247353.1| - 0.0038 17.3 0.0 0.0058 16.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_45 PF14947.1 gi|15668555|ref|NP_247353.1| - 0.0039 16.9 0.6 0.0039 16.9 0.4 2.3 3 0 0 3 3 3 1 Winged helix-turn-helix Sigma70_r4 PF04545.11 gi|15668555|ref|NP_247353.1| - 0.0041 16.3 0.0 0.029 13.6 0.0 2.1 1 1 0 1 1 1 1 Sigma-70, region 4 Rrf2 PF02082.15 gi|15668555|ref|NP_247353.1| - 0.0072 16.4 0.2 0.015 15.3 0.2 1.5 1 0 0 1 1 1 1 Transcriptional regulator RuvB_C PF05491.8 gi|15668555|ref|NP_247353.1| - 0.0079 15.7 0.2 0.022 14.4 0.1 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB C-terminus HTH_40 PF14493.1 gi|15668555|ref|NP_247353.1| - 0.01 16.0 0.6 0.018 15.2 0.1 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain FUR PF01475.14 gi|15668555|ref|NP_247353.1| - 0.014 15.3 0.5 0.74 9.7 0.1 2.4 2 0 0 2 2 2 0 Ferric uptake regulator family HTH_DeoR PF08220.7 gi|15668555|ref|NP_247353.1| - 0.018 14.5 0.1 0.03 13.8 0.1 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain EAP30 PF04157.11 gi|15668555|ref|NP_247353.1| - 0.018 14.2 0.1 0.039 13.0 0.0 1.5 2 0 0 2 2 2 0 EAP30/Vps36 family HTH_34 PF13601.1 gi|15668555|ref|NP_247353.1| - 0.02 14.9 0.3 0.053 13.5 0.2 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_23 PF13384.1 gi|15668555|ref|NP_247353.1| - 0.054 13.1 0.0 0.093 12.4 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Phage_terminase PF10668.4 gi|15668555|ref|NP_247353.1| - 0.078 12.7 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Phage terminase small subunit HTH_AsnC-type PF13404.1 gi|15668555|ref|NP_247353.1| - 0.079 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Hat1_N PF10394.4 gi|15668555|ref|NP_247353.1| - 0.082 12.9 4.7 0.11 12.5 2.8 1.4 1 1 0 1 1 1 0 Histone acetyl transferase HAT1 N-terminus HTH_12 PF08461.5 gi|15668555|ref|NP_247353.1| - 0.088 12.5 1.3 0.33 10.6 0.9 1.9 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_Tnp_Tc3_1 PF11427.3 gi|15668555|ref|NP_247353.1| - 0.11 12.1 0.1 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 Tc3 transposase GerE PF00196.14 gi|15668555|ref|NP_247353.1| - 0.23 10.8 2.4 0.22 10.8 0.4 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family GCN5L1 PF06320.8 gi|15668556|ref|NP_247354.1| - 0.057 13.2 1.2 1.7 8.5 0.1 2.3 1 1 0 2 2 2 0 GCN5-like protein 1 (GCN5L1) DevR PF01905.11 gi|15668557|ref|NP_247355.1| - 9.9e-80 267.2 0.0 1.1e-79 267.0 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 PucR PF07905.6 gi|15668557|ref|NP_247355.1| - 0.044 13.3 0.0 0.092 12.3 0.0 1.5 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family Cas_Cas5d PF09704.5 gi|15668558|ref|NP_247356.1| - 6e-19 68.5 0.0 7.4e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DEAD PF00270.24 gi|15668559|ref|NP_247357.1| - 2.7e-20 72.5 0.4 9.3e-17 61.0 0.0 2.5 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15668559|ref|NP_247357.1| - 8.7e-08 31.9 0.1 3.1e-07 30.1 0.1 2.0 1 1 0 1 1 1 1 Helicase conserved C-terminal domain Peptidase_M13_N PF05649.8 gi|15668559|ref|NP_247357.1| - 0.0071 15.4 0.0 0.017 14.2 0.0 1.6 1 0 0 1 1 1 1 Peptidase family M13 Thioredoxin_3 PF13192.1 gi|15668560|ref|NP_247358.1| - 0.046 13.5 0.3 0.17 11.7 0.0 2.1 3 0 0 3 3 3 0 Thioredoxin domain Cas_Csa4 PF09703.5 gi|15668561|ref|NP_247359.1| - 3.6e-144 480.2 2.2 4.1e-144 480.0 1.5 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csa4) Peptidase_M4 PF01447.13 gi|15668561|ref|NP_247359.1| - 0.03 14.4 0.4 2.3 8.3 0.0 2.2 2 0 0 2 2 2 0 Thermolysin metallopeptidase, catalytic domain CRISPR_Cas2 PF09827.4 gi|15668562|ref|NP_247360.1| - 5e-25 87.4 0.4 5e-25 87.4 0.3 1.5 2 0 0 2 2 2 1 CRISPR associated protein Cas2 GvpG PF05120.7 gi|15668562|ref|NP_247360.1| - 0.048 13.4 0.1 0.097 12.4 0.0 1.5 2 0 0 2 2 2 0 Gas vesicle protein G SHOCT PF09851.4 gi|15668562|ref|NP_247360.1| - 0.12 11.8 0.4 0.12 11.8 0.3 2.0 2 0 0 2 2 2 0 Short C-terminal domain RNA_pol_L_2 PF13656.1 gi|15668563|ref|NP_247361.1| - 6e-29 99.2 0.3 7.1e-29 99.0 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.19 gi|15668563|ref|NP_247361.1| - 3.6e-06 25.9 0.0 5.3e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF2067 PF09840.4 gi|15668564|ref|NP_247362.1| - 3.7e-65 219.0 5.2 4.1e-65 218.8 3.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) TUG-UBL1 PF11470.3 gi|15668564|ref|NP_247362.1| - 0.016 15.0 0.0 32 4.5 0.0 3.3 3 0 0 3 3 3 0 GLUT4 regulating protein TUG XFP_N PF09364.5 gi|15668564|ref|NP_247362.1| - 0.076 11.5 0.0 0.1 11.1 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain DUF2795 PF11387.3 gi|15668564|ref|NP_247362.1| - 0.1 12.4 0.0 0.77 9.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) tRNA-synt_1b PF00579.20 gi|15668565|ref|NP_247363.1| - 1.4e-50 172.1 0.0 1.6e-50 171.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|15668565|ref|NP_247363.1| - 9.6e-05 21.2 1.1 0.18 10.4 0.0 2.9 2 1 1 3 3 3 2 tRNA synthetases class I (K) Glyco_transf_92 PF01697.22 gi|15668566|ref|NP_247364.1| - 0.032 13.5 1.7 0.04 13.2 1.2 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 92 Lipase_GDSL PF00657.17 gi|15668566|ref|NP_247364.1| - 0.089 12.6 0.5 0.13 12.0 0.3 1.3 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase DUF1786 PF08735.5 gi|15668566|ref|NP_247364.1| - 0.12 11.4 0.1 0.12 11.4 0.1 1.3 1 1 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Methyltransf_31 PF13847.1 gi|15668567|ref|NP_247365.1| - 5.7e-13 48.7 2.9 7.5e-13 48.3 2.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15668567|ref|NP_247365.1| - 2.6e-10 40.8 0.2 4.2e-10 40.1 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15668567|ref|NP_247365.1| - 7.3e-08 31.9 0.7 1.1e-07 31.4 0.1 1.5 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|15668567|ref|NP_247365.1| - 1.6e-06 28.1 0.0 2.1e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15668567|ref|NP_247365.1| - 2.3e-06 27.9 0.1 3.5e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|15668567|ref|NP_247365.1| - 2.5e-06 26.6 1.2 3.5e-06 26.1 0.1 1.7 1 1 1 2 2 2 1 Putative methyltransferase RrnaAD PF00398.15 gi|15668567|ref|NP_247365.1| - 3.4e-06 26.2 0.0 5.2e-06 25.6 0.0 1.4 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.8 gi|15668567|ref|NP_247365.1| - 8.1e-06 25.1 1.6 1.5e-05 24.2 1.1 1.5 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|15668567|ref|NP_247365.1| - 1.1e-05 25.1 1.8 1.5e-05 24.6 1.2 1.3 1 1 0 1 1 1 1 Met-10+ like-protein tRNA_U5-meth_tr PF05958.6 gi|15668567|ref|NP_247365.1| - 1.2e-05 24.1 0.2 1.3e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_15 PF09445.5 gi|15668567|ref|NP_247365.1| - 1.8e-05 24.3 0.9 2.5e-05 23.8 0.6 1.3 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.7 gi|15668567|ref|NP_247365.1| - 2.2e-05 24.8 0.0 5.2e-05 23.6 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain GidB PF02527.10 gi|15668567|ref|NP_247365.1| - 4.5e-05 22.6 0.8 5.5e-05 22.3 0.6 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Cons_hypoth95 PF03602.10 gi|15668567|ref|NP_247365.1| - 6.5e-05 22.3 0.1 0.00011 21.6 0.1 1.5 1 1 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.14 gi|15668567|ref|NP_247365.1| - 0.00015 21.3 0.0 0.00028 20.4 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.6 gi|15668567|ref|NP_247365.1| - 0.00031 20.1 0.0 0.00039 19.8 0.0 1.3 1 1 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_25 PF13649.1 gi|15668567|ref|NP_247365.1| - 0.00037 20.7 0.1 0.00074 19.8 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain DOT1 PF08123.8 gi|15668567|ref|NP_247365.1| - 0.0022 17.3 0.7 0.0038 16.5 0.4 1.5 1 1 0 1 1 1 1 Histone methylation protein DOT1 CMAS PF02353.15 gi|15668567|ref|NP_247365.1| - 0.0027 16.8 0.0 0.0037 16.3 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.1 gi|15668567|ref|NP_247365.1| - 0.0041 16.8 0.1 0.0056 16.4 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|15668567|ref|NP_247365.1| - 0.015 14.8 0.1 0.02 14.4 0.1 1.4 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 N6_Mtase PF02384.11 gi|15668567|ref|NP_247365.1| - 0.027 13.5 0.1 0.047 12.7 0.1 1.4 1 1 0 1 1 1 0 N-6 DNA Methylase FtsJ PF01728.14 gi|15668567|ref|NP_247365.1| - 0.027 14.4 0.3 0.041 13.8 0.2 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_5 PF01795.14 gi|15668567|ref|NP_247365.1| - 0.037 13.2 0.1 0.068 12.4 0.0 1.4 1 1 0 1 1 1 0 MraW methylase family Mtr2 PF10429.4 gi|15668567|ref|NP_247365.1| - 0.045 13.5 0.1 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 Ubie_methyltran PF01209.13 gi|15668567|ref|NP_247365.1| - 0.051 12.6 0.5 0.07 12.2 0.3 1.3 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.1 gi|15668567|ref|NP_247365.1| - 0.062 12.9 0.1 0.099 12.3 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain DUF1889 PF08986.5 gi|15668567|ref|NP_247365.1| - 0.084 13.0 0.1 0.16 12.1 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1889) Nol1_Nop2_Fmu PF01189.12 gi|15668567|ref|NP_247365.1| - 0.12 11.7 0.1 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 NOL1/NOP2/sun family CBS PF00571.23 gi|15668568|ref|NP_247366.1| - 7.1e-30 102.5 0.5 6e-14 51.5 0.2 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.17 gi|15668568|ref|NP_247366.1| - 3e-19 68.7 20.6 8.6e-14 50.9 5.3 2.7 2 1 1 3 3 3 2 Peptidase family M50 Peptidase_M50B PF13398.1 gi|15668568|ref|NP_247366.1| - 2.8e-06 26.8 4.4 2.8e-06 26.8 3.0 2.0 2 0 0 2 2 2 1 Peptidase M50B-like Gal4_dimer PF03902.8 gi|15668568|ref|NP_247366.1| - 0.15 12.0 0.1 24 4.9 0.0 2.6 2 0 0 2 2 2 0 Gal4-like dimerisation domain Ribosomal_S27 PF01599.14 gi|15668569|ref|NP_247367.1| - 4.3e-23 80.8 4.8 5.1e-23 80.6 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a GFA PF04828.9 gi|15668569|ref|NP_247367.1| - 0.0025 17.7 0.9 0.83 9.6 0.0 2.0 1 1 1 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme Ribosomal_L37e PF01907.14 gi|15668569|ref|NP_247367.1| - 0.0047 16.6 0.8 0.0082 15.9 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein L37e zinc_ribbon_2 PF13240.1 gi|15668569|ref|NP_247367.1| - 0.037 13.5 0.8 2.6 7.6 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|15668569|ref|NP_247367.1| - 0.038 13.6 3.7 1.1 8.9 2.5 2.3 1 1 1 2 2 2 0 Nudix N-terminal DZR PF12773.2 gi|15668569|ref|NP_247367.1| - 0.038 13.7 1.6 0.062 13.1 1.1 1.4 1 1 0 1 1 1 0 Double zinc ribbon IBR PF01485.16 gi|15668569|ref|NP_247367.1| - 0.051 13.4 0.8 0.067 13.0 0.6 1.1 1 0 0 1 1 1 0 IBR domain Lar_restr_allev PF14354.1 gi|15668569|ref|NP_247367.1| - 0.07 13.4 1.8 0.11 12.7 1.3 1.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|15668569|ref|NP_247367.1| - 0.09 12.4 1.3 0.1 12.2 0.9 1.3 1 1 0 1 1 1 0 Putative transposase DNA-binding domain RNA_POL_M_15KD PF02150.11 gi|15668569|ref|NP_247367.1| - 0.09 12.4 1.0 0.62 9.8 0.0 2.1 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit HypA PF01155.14 gi|15668569|ref|NP_247367.1| - 0.16 11.6 0.2 0.16 11.6 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-HYPF PF07503.7 gi|15668569|ref|NP_247367.1| - 0.23 10.9 2.1 0.89 9.0 0.1 2.2 2 0 0 2 2 2 0 HypF finger Zn-ribbon_8 PF09723.5 gi|15668569|ref|NP_247367.1| - 0.24 11.3 2.4 9.7 6.2 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|15668569|ref|NP_247367.1| - 0.26 10.5 5.2 0.78 9.0 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain FeS PF04060.8 gi|15668569|ref|NP_247367.1| - 0.36 10.4 2.3 0.47 10.0 0.1 2.1 2 0 0 2 2 2 0 Putative Fe-S cluster zf-IS66 PF13005.2 gi|15668569|ref|NP_247367.1| - 0.46 10.5 4.0 3.3 7.7 0.1 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Auto_anti-p27 PF06677.7 gi|15668569|ref|NP_247367.1| - 0.69 9.7 4.0 2.1 8.1 2.8 1.8 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.7 gi|15668569|ref|NP_247367.1| - 0.71 9.2 4.4 2.2 7.6 3.1 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|15668569|ref|NP_247367.1| - 0.73 9.6 5.6 1.4 8.8 3.2 1.9 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DUF1610 PF07754.6 gi|15668569|ref|NP_247367.1| - 3 8.0 8.5 1.8 8.7 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DUF1936 PF09151.5 gi|15668569|ref|NP_247367.1| - 4.4 6.8 7.6 0.83 9.2 0.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1936) Ribosomal_S24e PF01282.14 gi|15668570|ref|NP_247368.1| - 1.5e-25 88.7 0.6 1.8e-25 88.5 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e DUF359 PF04019.7 gi|15668571|ref|NP_247369.1| - 1.9e-41 140.2 0.6 2.3e-41 139.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Spt4 PF06093.8 gi|15668572|ref|NP_247370.1| - 5.2e-14 51.8 0.9 7.9e-14 51.3 0.6 1.3 1 1 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.10 gi|15668572|ref|NP_247370.1| - 8.7e-05 21.8 1.9 0.00011 21.5 1.3 1.2 1 0 0 1 1 1 1 RecR protein CARD PF00619.16 gi|15668572|ref|NP_247370.1| - 0.032 14.0 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 Caspase recruitment domain zf-P11 PF03854.9 gi|15668572|ref|NP_247370.1| - 0.11 12.0 2.1 0.17 11.3 1.5 1.3 1 0 0 1 1 1 0 P-11 zinc finger zf-C3HC4_3 PF13920.1 gi|15668572|ref|NP_247370.1| - 0.18 11.4 2.4 0.23 11.1 1.6 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SHS2_Rpb7-N PF03876.12 gi|15668573|ref|NP_247371.1| - 2.7e-22 78.6 0.2 4.8e-22 77.8 0.2 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|15668573|ref|NP_247371.1| - 3.6e-12 46.1 0.4 8.4e-12 45.0 0.3 1.6 1 0 0 1 1 1 1 S1 RNA binding domain LAGLIDADG_3 PF14528.1 gi|15668574|ref|NP_247372.1| - 2.8e-22 78.7 11.7 6e-17 61.6 0.8 2.8 3 0 0 3 3 3 2 LAGLIDADG-like domain LAGLIDADG_2 PF03161.8 gi|15668574|ref|NP_247372.1| - 0.0022 17.9 0.1 0.0022 17.9 0.1 2.4 3 0 0 3 3 3 1 LAGLIDADG DNA endonuclease family LAGLIDADG_WhiA PF14527.1 gi|15668574|ref|NP_247372.1| - 0.005 16.6 2.0 0.71 9.7 0.0 3.1 3 1 1 4 4 4 1 WhiA LAGLIDADG-like domain DUF1580 PF07618.6 gi|15668574|ref|NP_247372.1| - 0.051 12.9 0.0 0.1 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) Hom_end PF05204.9 gi|15668574|ref|NP_247372.1| - 0.057 13.3 0.0 0.21 11.5 0.0 2.0 1 1 1 2 2 2 0 Homing endonuclease HTH_Tnp_IS630 PF01710.11 gi|15668574|ref|NP_247372.1| - 0.1 12.2 0.3 0.1 12.2 0.2 2.4 3 1 1 4 4 4 0 Transposase HTH_38 PF13936.1 gi|15668574|ref|NP_247372.1| - 0.11 12.0 0.8 1.8 8.1 0.5 2.8 1 1 0 1 1 1 0 Helix-turn-helix domain Spc42p PF11544.3 gi|15668574|ref|NP_247372.1| - 0.17 11.8 6.6 1.5 8.8 1.3 2.9 3 0 0 3 3 3 0 Spindle pole body component Spc42p DUF3287 PF11690.3 gi|15668574|ref|NP_247372.1| - 0.19 11.8 2.1 1.2 9.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) HTH_19 PF12844.2 gi|15668574|ref|NP_247372.1| - 0.3 11.1 3.5 0.21 11.6 0.2 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain PGM_PMM_I PF02878.11 gi|15668575|ref|NP_247373.1| - 2.1e-27 95.2 0.0 4.3e-27 94.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|15668575|ref|NP_247373.1| - 1.2e-22 80.1 0.1 1.1e-21 77.0 0.1 2.3 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|15668575|ref|NP_247373.1| - 8.5e-20 70.8 0.0 1.7e-19 69.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|15668575|ref|NP_247373.1| - 5.9e-14 51.8 0.1 5.6e-13 48.7 0.0 2.5 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DeoC PF01791.4 gi|15668576|ref|NP_247374.1| - 7.5e-67 225.0 0.0 8.9e-67 224.8 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 gi|15668576|ref|NP_247374.1| - 0.0079 15.4 0.9 0.32 10.1 0.2 3.1 2 1 1 3 3 3 1 Phosphoenolpyruvate phosphomutase OMPdecase PF00215.19 gi|15668576|ref|NP_247374.1| - 0.013 14.9 0.5 0.024 14.0 0.1 1.7 2 1 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHquinase_I PF01487.10 gi|15668576|ref|NP_247374.1| - 0.019 14.6 0.0 2 8.0 0.0 2.3 1 1 0 2 2 2 0 Type I 3-dehydroquinase TMP-TENI PF02581.12 gi|15668576|ref|NP_247374.1| - 0.03 13.4 0.0 0.46 9.5 0.0 2.3 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI PucR PF07905.6 gi|15668576|ref|NP_247374.1| - 0.07 12.7 0.1 1.2 8.7 0.0 2.6 3 1 0 3 3 3 0 Purine catabolism regulatory protein-like family UPF0150 PF03681.10 gi|15668576|ref|NP_247374.1| - 0.072 12.7 3.0 0.98 9.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0150) Zn-ribbon_8 PF09723.5 gi|15668577|ref|NP_247375.1| - 0.019 14.8 1.3 0.045 13.7 0.9 1.7 1 1 0 1 1 1 0 Zinc ribbon domain ADK_lid PF05191.9 gi|15668577|ref|NP_247375.1| - 0.021 14.4 0.6 0.06 13.0 0.4 1.8 1 1 0 1 1 1 0 Adenylate kinase, active site lid zf-RING_3 PF14369.1 gi|15668577|ref|NP_247375.1| - 0.025 14.5 0.5 0.036 14.0 0.3 1.3 1 0 0 1 1 1 0 zinc-finger Nudix_N_2 PF14803.1 gi|15668577|ref|NP_247375.1| - 0.026 14.2 2.2 4.9 6.9 0.0 2.8 3 1 0 3 3 3 0 Nudix N-terminal zf-ribbon_3 PF13248.1 gi|15668577|ref|NP_247375.1| - 0.036 13.2 3.4 0.15 11.3 0.3 2.5 3 0 0 3 3 3 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|15668577|ref|NP_247375.1| - 0.088 12.4 0.5 0.16 11.6 0.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TF_Zn_Ribbon PF08271.7 gi|15668577|ref|NP_247375.1| - 0.12 11.7 2.1 5.1 6.4 0.3 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|15668577|ref|NP_247375.1| - 0.13 12.6 0.3 0.13 12.6 0.2 1.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar DZR PF12773.2 gi|15668577|ref|NP_247375.1| - 0.14 12.0 2.6 0.98 9.2 1.3 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-H2C2_2 PF13465.1 gi|15668577|ref|NP_247375.1| - 0.15 12.3 2.2 1.7 9.0 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-ISL3 PF14690.1 gi|15668577|ref|NP_247375.1| - 0.24 11.4 4.1 0.87 9.6 0.1 2.6 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_2 PF13240.1 gi|15668577|ref|NP_247375.1| - 0.62 9.6 6.7 0.28 10.7 2.2 2.2 2 1 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.6 gi|15668577|ref|NP_247375.1| - 0.99 8.9 0.1 0.99 8.9 0.1 2.8 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain DUF2353 PF09789.4 gi|15668578|ref|NP_247376.1| - 0.0081 15.4 2.6 0.01 15.1 1.8 1.0 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) TPR_MLP1_2 PF07926.7 gi|15668578|ref|NP_247376.1| - 0.014 15.1 4.9 0.016 14.9 3.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DivIC PF04977.10 gi|15668578|ref|NP_247376.1| - 0.023 14.1 0.2 0.029 13.8 0.1 1.2 1 0 0 1 1 1 0 Septum formation initiator TMF_DNA_bd PF12329.3 gi|15668578|ref|NP_247376.1| - 0.03 14.1 5.2 0.036 13.8 3.6 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Myosin_HC-like PF07058.6 gi|15668578|ref|NP_247376.1| - 0.04 13.0 0.3 0.046 12.8 0.2 1.1 1 0 0 1 1 1 0 Myosin II heavy chain-like bZIP_1 PF00170.16 gi|15668578|ref|NP_247376.1| - 0.056 13.4 5.8 0.07 13.0 4.0 1.1 1 0 0 1 1 1 0 bZIP transcription factor Med9 PF07544.8 gi|15668578|ref|NP_247376.1| - 0.064 12.9 0.3 0.068 12.9 0.2 1.1 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DUF4140 PF13600.1 gi|15668578|ref|NP_247376.1| - 0.079 13.4 0.2 0.085 13.3 0.2 1.1 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) IncA PF04156.9 gi|15668578|ref|NP_247376.1| - 0.11 12.0 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 IncA protein Ax_dynein_light PF10211.4 gi|15668578|ref|NP_247376.1| - 0.2 11.4 4.1 0.24 11.1 2.8 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain Prefoldin_2 PF01920.15 gi|15668578|ref|NP_247376.1| - 0.28 10.9 6.3 0.35 10.6 4.4 1.1 1 0 0 1 1 1 0 Prefoldin subunit CENP-Q PF13094.1 gi|15668578|ref|NP_247376.1| - 0.52 10.3 7.0 0.61 10.0 4.8 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit TSC22 PF01166.13 gi|15668578|ref|NP_247376.1| - 0.58 10.1 4.9 0.75 9.7 3.4 1.2 1 0 0 1 1 1 0 TSC-22/dip/bun family XhlA PF10779.4 gi|15668578|ref|NP_247376.1| - 0.9 9.5 3.9 1.3 8.9 2.7 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Med21 PF11221.3 gi|15668578|ref|NP_247376.1| - 1 9.3 3.5 1.2 9.1 2.4 1.1 1 0 0 1 1 1 0 Subunit 21 of Mediator complex Memo PF01875.12 gi|15668579|ref|NP_247377.1| - 3.4e-101 337.7 0.1 3.9e-101 337.5 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.13 gi|15668579|ref|NP_247377.1| - 6.8e-05 21.9 0.0 9.6e-05 21.4 0.0 1.4 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase LeuA_dimer PF08502.5 gi|15668579|ref|NP_247377.1| - 0.079 12.7 0.1 0.18 11.6 0.1 1.6 1 1 0 1 1 1 0 LeuA allosteric (dimerisation) domain Mo-nitro_C PF06967.6 gi|15668579|ref|NP_247377.1| - 0.12 12.5 0.2 0.27 11.4 0.0 1.6 2 0 0 2 2 2 0 Mo-dependent nitrogenase C-terminus DUF2112 PF09885.4 gi|15668580|ref|NP_247378.1| - 2.3e-68 228.3 0.1 2.6e-68 228.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) DUF2111 PF09884.4 gi|15668581|ref|NP_247379.1| - 9.6e-36 121.4 3.0 1.2e-35 121.1 2.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) PfkB PF00294.19 gi|15668582|ref|NP_247380.1| - 1.8e-66 224.2 0.0 2.1e-66 224.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase NadA PF02445.11 gi|15668583|ref|NP_247381.1| - 1.3e-115 385.3 0.7 1.4e-115 385.1 0.5 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DinI PF06183.8 gi|15668583|ref|NP_247381.1| - 0.11 12.5 0.0 7.3 6.6 0.0 3.0 2 0 0 2 2 2 0 DinI-like family DUF372 PF04036.7 gi|15668584|ref|NP_247382.1| - 2.6e-22 77.9 0.1 3.5e-22 77.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF372) DUF381 PF04038.7 gi|15668584|ref|NP_247382.1| - 1.8e-18 66.3 2.1 3.2e-18 65.5 1.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF381) Fae PF08714.6 gi|15668584|ref|NP_247382.1| - 0.096 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Formaldehyde-activating enzyme (Fae) CbiA PF01656.18 gi|15668586|ref|NP_247384.1| - 3.7e-19 68.9 0.2 4.9e-19 68.4 0.2 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15668586|ref|NP_247384.1| - 5e-17 62.2 0.0 1.1e-16 61.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|15668586|ref|NP_247384.1| - 4e-06 26.2 2.0 8.5e-05 21.8 1.4 2.2 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|15668586|ref|NP_247384.1| - 0.00027 20.1 2.6 0.018 14.1 0.0 3.2 3 1 0 3 3 3 1 Anion-transporting ATPase MipZ PF09140.6 gi|15668586|ref|NP_247384.1| - 0.00041 19.5 0.0 0.0012 18.0 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ ParA PF10609.4 gi|15668586|ref|NP_247384.1| - 0.0092 15.8 0.3 0.018 14.9 0.2 1.4 1 0 0 1 1 1 1 ParA/MinD ATPase like SRP54 PF00448.17 gi|15668586|ref|NP_247384.1| - 0.035 13.5 0.3 0.25 10.7 0.1 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_25 PF13481.1 gi|15668586|ref|NP_247384.1| - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_26 PF13500.1 gi|15668586|ref|NP_247384.1| - 0.27 10.8 3.1 0.3 10.6 0.3 2.1 2 0 0 2 2 2 0 AAA domain His_biosynth PF00977.16 gi|15668587|ref|NP_247385.1| - 4.6e-92 307.4 1.9 5.4e-92 307.1 1.3 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|15668587|ref|NP_247385.1| - 1.4e-07 30.6 0.0 3.4e-05 22.8 0.0 2.2 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) ThiG PF05690.9 gi|15668587|ref|NP_247385.1| - 5.4e-07 28.9 0.3 0.00077 18.6 0.1 2.1 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|15668587|ref|NP_247385.1| - 3.4e-06 26.4 0.1 0.0041 16.3 0.0 2.4 2 1 0 2 2 2 2 Nitronate monooxygenase PcrB PF01884.12 gi|15668587|ref|NP_247385.1| - 2.2e-05 23.8 3.1 0.00014 21.2 0.1 2.7 2 1 1 3 3 3 1 PcrB family TMP-TENI PF02581.12 gi|15668587|ref|NP_247385.1| - 5.4e-05 22.3 0.3 0.099 11.7 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI DHO_dh PF01180.16 gi|15668587|ref|NP_247385.1| - 0.00096 18.1 0.1 0.026 13.5 0.0 2.1 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase IMPDH PF00478.20 gi|15668587|ref|NP_247385.1| - 0.0012 17.8 0.2 0.5 9.1 0.0 2.3 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain G3P_antiterm PF04309.7 gi|15668587|ref|NP_247385.1| - 0.0053 15.8 0.1 0.23 10.4 0.1 2.3 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator ABC_tran PF00005.22 gi|15668588|ref|NP_247386.1| - 2.4e-32 112.1 0.0 3.9e-32 111.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15668588|ref|NP_247386.1| - 1.3e-10 41.7 0.0 2e-05 24.7 0.0 2.4 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|15668588|ref|NP_247386.1| - 2.8e-08 33.2 0.2 6.5e-06 25.4 0.0 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA PF00004.24 gi|15668588|ref|NP_247386.1| - 1.9e-06 28.1 0.6 1.9e-05 24.8 0.4 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|15668588|ref|NP_247386.1| - 1e-05 25.3 0.2 0.00074 19.2 0.0 2.3 2 0 0 2 2 2 1 Archaeal ATPase SMC_N PF02463.14 gi|15668588|ref|NP_247386.1| - 6.1e-05 22.3 0.1 0.024 13.8 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|15668588|ref|NP_247386.1| - 0.00053 20.2 1.7 0.2 11.9 0.1 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|15668588|ref|NP_247386.1| - 0.0013 18.7 0.0 0.0026 17.7 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|15668588|ref|NP_247386.1| - 0.0019 18.9 1.0 0.026 15.3 0.7 2.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.10 gi|15668588|ref|NP_247386.1| - 0.0019 16.9 0.0 0.0029 16.3 0.0 1.1 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|15668588|ref|NP_247386.1| - 0.0021 18.1 0.1 0.0053 16.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|15668588|ref|NP_247386.1| - 0.0021 17.7 0.0 0.066 12.9 0.0 2.3 2 0 0 2 2 2 1 Part of AAA domain DUF258 PF03193.11 gi|15668588|ref|NP_247386.1| - 0.0041 16.3 0.0 0.0067 15.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_28 PF13521.1 gi|15668588|ref|NP_247386.1| - 0.0047 16.8 0.1 0.16 11.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|15668588|ref|NP_247386.1| - 0.0071 16.2 0.5 0.12 12.3 0.0 2.7 2 1 0 3 3 3 1 AAA domain PduV-EutP PF10662.4 gi|15668588|ref|NP_247386.1| - 0.014 14.8 0.1 0.11 11.9 0.0 2.3 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.7 gi|15668588|ref|NP_247386.1| - 0.022 14.4 0.2 0.081 12.5 0.1 1.9 2 0 0 2 2 2 0 NACHT domain T2SE PF00437.15 gi|15668588|ref|NP_247386.1| - 0.034 13.0 0.0 0.055 12.3 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein SbcCD_C PF13558.1 gi|15668588|ref|NP_247386.1| - 0.055 13.3 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit HTH_30 PF13556.1 gi|15668588|ref|NP_247386.1| - 0.068 12.7 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain NB-ARC PF00931.17 gi|15668588|ref|NP_247386.1| - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.1 gi|15668588|ref|NP_247386.1| - 0.1 12.1 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|15668588|ref|NP_247386.1| - 0.1 12.0 0.1 0.65 9.3 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain Miro PF08477.8 gi|15668588|ref|NP_247386.1| - 0.11 13.0 0.1 0.3 11.5 0.0 1.8 2 0 0 2 2 1 0 Miro-like protein AAA_25 PF13481.1 gi|15668588|ref|NP_247386.1| - 0.13 11.6 0.0 0.28 10.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|15668588|ref|NP_247386.1| - 0.14 12.4 1.3 0.32 11.2 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|15668588|ref|NP_247386.1| - 0.15 11.9 0.3 0.34 10.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.17 gi|15668589|ref|NP_247387.1| - 4.3e-24 85.0 13.9 4.3e-24 85.0 9.6 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DNA_ligase_A_M PF01068.16 gi|15668590|ref|NP_247388.1| - 4.8e-32 110.9 0.6 1.1e-31 109.8 0.4 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.5 gi|15668590|ref|NP_247388.1| - 2.6e-12 46.9 0.4 1.7e-11 44.3 0.1 2.3 2 1 0 2 2 2 1 RNA ligase Ribosomal_S20p PF01649.13 gi|15668590|ref|NP_247388.1| - 3.1 8.2 6.4 1.4 9.3 0.2 3.1 3 0 0 3 3 3 0 Ribosomal protein S20 DZR PF12773.2 gi|15668592|ref|NP_247390.1| - 9.2e-20 70.2 16.1 1.3e-14 53.7 6.8 2.2 2 0 0 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|15668592|ref|NP_247390.1| - 9.1e-19 66.0 15.6 1e-07 30.9 0.9 3.2 3 0 0 3 3 3 3 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15668592|ref|NP_247390.1| - 5.4e-18 63.8 15.3 1.1e-06 27.8 0.8 3.3 3 0 0 3 3 3 3 zinc-ribbon domain UPF0547 PF10571.4 gi|15668592|ref|NP_247390.1| - 1.9e-06 27.4 18.6 0.00029 20.4 0.6 3.6 3 1 0 3 3 3 2 Uncharacterised protein family UPF0547 OrfB_Zn_ribbon PF07282.6 gi|15668592|ref|NP_247390.1| - 7.2e-05 22.3 14.8 0.0085 15.7 1.6 3.4 1 1 1 3 3 3 2 Putative transposase DNA-binding domain zf-C4pol PF14260.1 gi|15668592|ref|NP_247390.1| - 0.0048 16.8 10.9 0.014 15.4 4.4 2.5 1 1 1 2 2 2 1 C4-type zinc-finger of DNA polymerase delta DNA_RNApol_7kD PF03604.8 gi|15668592|ref|NP_247390.1| - 0.005 16.2 21.6 0.027 13.9 2.0 4.1 3 1 0 3 3 3 2 DNA directed RNA polymerase, 7 kDa subunit zf-NADH-PPase PF09297.6 gi|15668592|ref|NP_247390.1| - 0.028 13.9 1.9 0.028 13.9 1.3 4.8 5 1 0 5 5 4 0 NADH pyrophosphatase zinc ribbon domain zf-RING_4 PF14570.1 gi|15668592|ref|NP_247390.1| - 0.028 13.9 2.6 0.028 13.9 1.8 3.2 3 1 0 3 3 3 0 RING/Ubox like zinc-binding domain C1_1 PF00130.17 gi|15668592|ref|NP_247390.1| - 0.029 14.0 3.0 0.029 14.0 2.1 3.4 1 1 2 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C3HC4_3 PF13920.1 gi|15668592|ref|NP_247390.1| - 0.057 13.0 19.2 0.16 11.7 1.1 3.8 3 1 1 4 4 4 0 Zinc finger, C3HC4 type (RING finger) Sgf11 PF08209.6 gi|15668592|ref|NP_247390.1| - 0.095 12.0 0.9 0.095 12.0 0.6 4.8 2 2 3 5 5 5 0 Sgf11 (transcriptional regulation protein) Ribosomal_L32p PF01783.18 gi|15668592|ref|NP_247390.1| - 0.14 12.3 0.7 0.14 12.3 0.5 3.4 1 1 2 3 3 3 0 Ribosomal L32p protein family Zn_ribbon_recom PF13408.1 gi|15668592|ref|NP_247390.1| - 0.42 10.9 15.5 12 6.2 0.1 4.9 3 1 1 4 4 4 0 Recombinase zinc beta ribbon domain DUF1451 PF07295.6 gi|15668592|ref|NP_247390.1| - 0.44 10.3 12.9 0.11 12.3 0.9 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1451) DUF2321 PF10083.4 gi|15668592|ref|NP_247390.1| - 0.91 9.0 8.4 1.2 8.6 0.3 2.8 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2321) RRN7 PF11781.3 gi|15668592|ref|NP_247390.1| - 1.2 8.6 23.0 4.1 6.9 0.1 4.6 3 1 1 4 4 4 0 RNA polymerase I-specific transcription initiation factor Rrn7 DUF164 PF02591.10 gi|15668592|ref|NP_247390.1| - 1.3 8.9 21.7 0.88 9.4 0.2 5.4 4 2 2 6 6 6 0 Putative zinc ribbon domain RNHCP PF12647.2 gi|15668592|ref|NP_247390.1| - 1.4 8.8 12.8 0.87 9.4 1.0 2.8 1 1 2 3 3 3 0 RNHCP domain HypA PF01155.14 gi|15668592|ref|NP_247390.1| - 1.7 8.3 19.9 1.5 8.5 1.3 3.4 1 1 2 3 3 3 0 Hydrogenase expression/synthesis hypA family DUF4187 PF13821.1 gi|15668592|ref|NP_247390.1| - 2.3 7.8 14.6 0.072 12.6 2.0 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4187) C1_4 PF07975.7 gi|15668592|ref|NP_247390.1| - 2.9 7.9 12.4 5.9 6.9 0.9 3.2 3 0 0 3 3 3 0 TFIIH C1-like domain zf-IS66 PF13005.2 gi|15668592|ref|NP_247390.1| - 3.3 7.7 19.4 0.83 9.6 0.2 5.2 3 2 2 5 5 5 0 zinc-finger binding domain of transposase IS66 zf-C3HC4_4 PF15227.1 gi|15668592|ref|NP_247390.1| - 4.1 7.3 17.7 3.9 7.4 4.8 3.3 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING zf-Di19 PF05605.7 gi|15668592|ref|NP_247390.1| - 4.3 7.5 13.2 1.1 9.4 2.2 2.8 1 1 2 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Zn-ribbon_8 PF09723.5 gi|15668592|ref|NP_247390.1| - 6.2 6.8 22.2 1.7 8.7 1.7 4.7 2 1 3 5 5 5 0 Zinc ribbon domain Nudix_N_2 PF14803.1 gi|15668592|ref|NP_247390.1| - 7.1 6.4 24.2 2.9 7.6 1.6 4.9 3 2 2 5 5 4 0 Nudix N-terminal Mut7-C PF01927.11 gi|15668592|ref|NP_247390.1| - 8.4 6.3 13.2 14 5.6 8.0 2.2 1 1 0 1 1 1 0 Mut7-C RNAse domain DUF4215 PF13948.1 gi|15668592|ref|NP_247390.1| - 8.6 6.6 12.1 26 5.1 8.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4215) PHP_C PF13263.1 gi|15668593|ref|NP_247391.1| - 1.3e-15 56.5 0.0 2.6e-15 55.6 0.0 1.5 1 0 0 1 1 1 1 PHP-associated PHP PF02811.14 gi|15668593|ref|NP_247391.1| - 2.7e-06 27.2 0.2 0.01 15.6 0.0 2.3 1 1 0 2 2 2 2 PHP domain DUF3579 PF12112.3 gi|15668593|ref|NP_247391.1| - 0.14 12.1 0.1 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3579) Regulator_TrmB PF11495.3 gi|15668594|ref|NP_247392.1| - 1.2e-06 27.6 0.0 2.5e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Pas_Saposin PF09016.5 gi|15668594|ref|NP_247392.1| - 0.055 13.4 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Pas factor saposin fold DUF70 PF01901.11 gi|15668595|ref|NP_247393.1| - 1.3e-100 336.6 50.1 1.5e-100 336.4 34.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF70 DUF70 PF01901.11 gi|15668596|ref|NP_247394.1| - 1.7e-87 293.5 55.2 2.5e-87 293.0 38.2 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF70 SPOUT_MTase_2 PF14419.1 gi|15668597|ref|NP_247395.1| - 9.4e-86 285.4 0.2 1.6e-85 284.6 0.2 1.3 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP THUMP PF02926.12 gi|15668597|ref|NP_247395.1| - 5.7e-31 107.3 4.4 1.6e-30 105.8 3.1 1.8 1 0 0 1 1 1 1 THUMP domain SpoU_methylase PF00588.14 gi|15668597|ref|NP_247395.1| - 0.025 14.4 0.0 1.4 8.8 0.0 2.7 2 1 0 2 2 2 0 SpoU rRNA Methylase family Spt5-NGN PF03439.8 gi|15668597|ref|NP_247395.1| - 0.032 13.9 0.3 0.14 11.9 0.2 2.2 1 1 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section DUF531 PF04407.7 gi|15668597|ref|NP_247395.1| - 0.036 13.9 0.0 0.088 12.6 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF531) DapB_C PF05173.9 gi|15668598|ref|NP_247396.1| - 3.8e-46 156.1 0.4 6.6e-46 155.3 0.1 1.5 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.15 gi|15668598|ref|NP_247396.1| - 1.3e-39 134.9 3.3 2.3e-39 134.1 2.3 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|15668598|ref|NP_247396.1| - 3.2e-05 24.2 2.1 3.3e-05 24.1 0.2 2.0 3 0 0 3 3 3 1 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.16 gi|15668598|ref|NP_247396.1| - 0.0014 18.1 0.1 0.0026 17.2 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GFO_IDH_MocA PF01408.17 gi|15668598|ref|NP_247396.1| - 0.0039 17.6 0.2 0.012 16.1 0.1 1.7 1 1 1 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.11 gi|15668598|ref|NP_247396.1| - 0.0049 17.2 0.2 0.011 16.0 0.2 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain 3Beta_HSD PF01073.14 gi|15668598|ref|NP_247396.1| - 0.0063 15.2 0.3 0.015 14.0 0.1 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Gp_dh_N PF00044.19 gi|15668598|ref|NP_247396.1| - 0.016 15.2 2.0 0.072 13.0 1.4 2.1 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PSI_PSAK PF01241.13 gi|15668598|ref|NP_247396.1| - 0.53 10.3 2.5 0.75 9.8 0.4 2.2 2 0 0 2 2 2 0 Photosystem I psaG / psaK Arch_ATPase PF01637.13 gi|15668599|ref|NP_247397.1| - 2.8e-14 53.3 1.6 2.9e-14 53.3 1.1 1.0 1 0 0 1 1 1 1 Archaeal ATPase AAA_16 PF13191.1 gi|15668599|ref|NP_247397.1| - 2.3e-05 24.4 0.0 2.4e-05 24.4 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|15668599|ref|NP_247397.1| - 0.00014 21.7 0.2 0.00018 21.4 0.2 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|15668599|ref|NP_247397.1| - 0.00076 19.6 0.0 0.00076 19.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.8 gi|15668599|ref|NP_247397.1| - 0.017 14.0 0.0 0.017 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DAP3 PF10236.4 gi|15668599|ref|NP_247397.1| - 0.039 12.8 0.0 0.042 12.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 DnaB_C PF03796.10 gi|15668599|ref|NP_247397.1| - 0.044 12.6 0.0 0.044 12.6 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DUF258 PF03193.11 gi|15668599|ref|NP_247397.1| - 0.068 12.3 0.0 0.074 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|15668600|ref|NP_247398.1| - 8e-10 38.8 0.1 9e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Archaeal ATPase AAA_22 PF13401.1 gi|15668600|ref|NP_247398.1| - 0.0004 20.5 0.0 0.00048 20.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|15668600|ref|NP_247398.1| - 0.011 15.6 0.1 0.012 15.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF234 PF03008.9 gi|15668601|ref|NP_247399.1| - 4.1e-26 91.0 2.4 5.3e-26 90.6 1.7 1.2 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function DUF4143 PF13635.1 gi|15668601|ref|NP_247399.1| - 3.4e-08 33.5 0.5 5.3e-08 32.9 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) NERD PF08378.6 gi|15668601|ref|NP_247399.1| - 0.0059 16.8 0.2 0.007 16.6 0.1 1.2 1 0 0 1 1 1 1 Nuclease-related domain Peptidase_M4 PF01447.13 gi|15668602|ref|NP_247400.1| - 0.081 13.0 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Thermolysin metallopeptidase, catalytic domain Ribosomal_S7 PF00177.16 gi|15668602|ref|NP_247400.1| - 0.12 11.9 1.5 3.6 7.1 1.1 2.2 1 1 0 1 1 1 0 Ribosomal protein S7p/S5e RNA_binding PF01877.12 gi|15668602|ref|NP_247400.1| - 0.2 11.6 2.3 1.4 8.9 0.1 2.5 2 1 1 3 3 3 0 RNA binding WbqC PF08889.6 gi|15668603|ref|NP_247401.1| - 0.00022 20.7 1.3 0.0003 20.3 0.9 1.4 1 0 0 1 1 1 1 WbqC-like protein family UDPG_MGDP_dh_N PF03721.9 gi|15668604|ref|NP_247402.1| - 2e-58 196.8 2.2 2.8e-58 196.3 0.4 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|15668604|ref|NP_247402.1| - 8.2e-31 106.0 0.6 3e-30 104.2 0.0 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|15668604|ref|NP_247402.1| - 9e-25 86.8 3.0 3.7e-24 84.9 0.3 2.9 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.10 gi|15668604|ref|NP_247402.1| - 5.4e-10 39.3 0.0 1.5e-07 31.3 0.0 3.0 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Methyltransf_31 PF13847.1 gi|15668604|ref|NP_247402.1| - 2.6e-07 30.3 2.2 5.3e-07 29.3 0.2 2.5 2 1 0 2 2 2 1 Methyltransferase domain TrkA_N PF02254.13 gi|15668604|ref|NP_247402.1| - 9.2e-07 28.8 4.5 8.1e-05 22.6 0.0 3.8 4 0 0 4 4 4 1 TrkA-N domain 2-Hacid_dh_C PF02826.14 gi|15668604|ref|NP_247402.1| - 1.2e-06 27.7 0.5 0.00024 20.3 0.1 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|15668604|ref|NP_247402.1| - 2.5e-06 26.9 0.2 2.4e-05 23.8 0.0 2.5 3 0 0 3 3 3 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.13 gi|15668604|ref|NP_247402.1| - 0.00011 21.8 0.0 0.00037 20.1 0.0 1.9 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_18 PF12847.2 gi|15668604|ref|NP_247402.1| - 0.00025 21.6 0.1 0.0028 18.2 0.0 2.7 4 1 0 4 4 3 1 Methyltransferase domain NAD_Gly3P_dh_N PF01210.18 gi|15668604|ref|NP_247402.1| - 0.00049 19.8 0.0 0.093 12.4 0.0 3.3 3 0 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.12 gi|15668604|ref|NP_247402.1| - 0.00098 19.5 2.6 0.41 11.1 0.0 3.7 3 1 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.7 gi|15668604|ref|NP_247402.1| - 0.0023 17.3 0.3 0.88 8.9 0.0 3.3 3 0 0 3 3 3 1 Acetohydroxy acid isomeroreductase, catalytic domain UPF0146 PF03686.8 gi|15668604|ref|NP_247402.1| - 0.0072 16.1 0.1 0.031 14.0 0.1 2.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) NAD_binding_10 PF13460.1 gi|15668604|ref|NP_247402.1| - 0.012 15.6 0.0 1 9.3 0.0 2.5 2 0 0 2 2 2 0 NADH(P)-binding Bombinin PF05298.6 gi|15668604|ref|NP_247402.1| - 0.012 15.1 0.1 0.2 11.0 0.0 2.3 2 0 0 2 2 2 0 Bombinin Ldh_1_N PF00056.18 gi|15668604|ref|NP_247402.1| - 0.015 15.1 0.1 0.22 11.3 0.0 2.5 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Methyltransf_23 PF13489.1 gi|15668604|ref|NP_247402.1| - 0.025 14.3 0.0 0.071 12.8 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain OKR_DC_1_N PF03709.10 gi|15668604|ref|NP_247402.1| - 0.032 14.2 0.0 0.13 12.3 0.0 2.1 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain ThiF PF00899.16 gi|15668604|ref|NP_247402.1| - 0.045 13.5 1.1 0.17 11.7 0.1 2.4 2 0 0 2 2 2 0 ThiF family DAO PF01266.19 gi|15668604|ref|NP_247402.1| - 0.059 12.2 0.1 0.098 11.5 0.1 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox PF00070.22 gi|15668604|ref|NP_247402.1| - 0.065 13.6 0.5 0.66 10.4 0.1 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase CofC PF01983.11 gi|15668604|ref|NP_247402.1| - 0.62 8.9 6.1 11 4.8 0.1 3.5 3 1 1 4 4 4 0 Guanylyl transferase CofC like Arginosuc_synth PF00764.14 gi|15668605|ref|NP_247403.1| - 3.2e-192 638.7 0.3 3.7e-192 638.5 0.2 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.8 gi|15668605|ref|NP_247403.1| - 1e-05 24.9 0.1 3.1e-05 23.3 0.1 1.8 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|15668605|ref|NP_247403.1| - 0.0019 17.7 0.0 0.003 17.1 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.11 gi|15668605|ref|NP_247403.1| - 0.071 11.6 0.0 0.12 10.9 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase dUTPase PF00692.14 gi|15668606|ref|NP_247404.1| - 8.7e-08 31.6 0.0 6e-07 28.9 0.0 2.1 2 1 0 2 2 2 1 dUTPase DCD PF06559.6 gi|15668606|ref|NP_247404.1| - 3.7e-07 28.8 0.0 0.0013 17.2 0.0 3.0 2 1 1 3 3 3 3 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Class_IIIsignal PF04021.7 gi|15668607|ref|NP_247405.1| - 2e-10 40.0 2.3 3.1e-10 39.3 1.6 1.3 1 0 0 1 1 1 1 Class III signal peptide DUF347 PF03988.7 gi|15668607|ref|NP_247405.1| - 0.016 15.1 0.2 0.023 14.5 0.1 1.2 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) ATP13 PF12921.2 gi|15668607|ref|NP_247405.1| - 0.045 13.0 0.1 0.05 12.9 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ATPase expression DUF4330 PF14221.1 gi|15668607|ref|NP_247405.1| - 0.068 13.0 0.8 0.07 12.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) HTH_34 PF13601.1 gi|15668608|ref|NP_247406.1| - 6.2e-22 77.4 0.3 7.1e-22 77.2 0.2 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|15668608|ref|NP_247406.1| - 4.3e-08 32.6 0.3 7.4e-08 31.9 0.0 1.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|15668608|ref|NP_247406.1| - 3.4e-07 29.9 0.0 4.6e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|15668608|ref|NP_247406.1| - 0.00025 20.3 0.0 0.00053 19.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|15668608|ref|NP_247406.1| - 0.00039 20.0 0.0 0.00056 19.5 0.0 1.2 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|15668608|ref|NP_247406.1| - 0.00056 19.6 0.0 0.00084 19.0 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.1 gi|15668608|ref|NP_247406.1| - 0.0062 16.8 0.0 0.0076 16.5 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|15668608|ref|NP_247406.1| - 0.015 14.9 0.1 0.022 14.4 0.0 1.5 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HxlR PF01638.12 gi|15668608|ref|NP_247406.1| - 0.065 12.8 0.1 0.076 12.6 0.1 1.1 1 0 0 1 1 1 0 HxlR-like helix-turn-helix MarR_2 PF12802.2 gi|15668608|ref|NP_247406.1| - 0.07 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 MarR family Mga PF05043.8 gi|15668608|ref|NP_247406.1| - 0.12 12.7 0.7 0.17 12.2 0.1 1.5 2 0 0 2 2 2 0 Mga helix-turn-helix domain DUF4423 PF14394.1 gi|15668608|ref|NP_247406.1| - 0.12 11.9 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) ANT PF03374.9 gi|15668608|ref|NP_247406.1| - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain TrbL PF04610.9 gi|15668609|ref|NP_247407.1| - 0.00019 21.2 3.2 0.00019 21.2 2.2 2.1 1 1 0 2 2 2 1 TrbL/VirB6 plasmid conjugal transfer protein Sdh_cyt PF01127.17 gi|15668609|ref|NP_247407.1| - 2.4 8.0 11.7 0.58 10.0 2.7 2.6 1 1 2 3 3 3 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF86 PF01934.12 gi|15668610|ref|NP_247408.1| - 2.1e-23 82.2 1.0 3.7e-23 81.4 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF86 AIG2 PF06094.7 gi|15668610|ref|NP_247408.1| - 3.9e-09 36.9 0.5 6.2e-09 36.2 0.3 1.3 1 0 0 1 1 1 1 AIG2-like family DUF2853 PF11015.3 gi|15668610|ref|NP_247408.1| - 0.06 13.8 1.2 0.33 11.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2853) NTP_transf_2 PF01909.18 gi|15668611|ref|NP_247409.1| - 2e-16 60.0 1.0 2.3e-16 59.9 0.7 1.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15668611|ref|NP_247409.1| - 0.016 15.2 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm TGT PF01702.13 gi|15668612|ref|NP_247410.1| - 7e-59 198.9 0.0 1.1e-58 198.4 0.0 1.3 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase PUA PF01472.15 gi|15668612|ref|NP_247410.1| - 8.1e-17 60.7 0.1 2.5e-16 59.1 0.0 1.9 2 0 0 2 2 2 1 PUA domain TGT_C2 PF14810.1 gi|15668612|ref|NP_247410.1| - 9.2e-15 54.2 0.1 3e-14 52.6 0.0 2.0 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase TGT_C1 PF14809.1 gi|15668612|ref|NP_247410.1| - 2e-08 33.9 1.3 0.006 16.3 0.1 2.6 1 1 1 2 2 2 2 C1 domain of tRNA-guanine transglycosylase dimerisation DUF4040 PF13244.1 gi|15668613|ref|NP_247411.1| - 1.5e-17 63.3 2.6 1.8e-17 63.0 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) Polysacc_synt_C PF14667.1 gi|15668613|ref|NP_247411.1| - 0.0065 16.2 3.9 0.0079 16.0 2.7 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF3733 PF12534.3 gi|15668613|ref|NP_247411.1| - 0.03 13.5 0.5 0.055 12.7 0.4 1.4 1 0 0 1 1 1 0 Leucine-rich repeat containing protein 8 Caps_synth_CapC PF14102.1 gi|15668613|ref|NP_247411.1| - 0.049 13.7 0.9 0.056 13.5 0.6 1.1 1 0 0 1 1 1 0 Capsule biosynthesis CapC DUF3522 PF12036.3 gi|15668613|ref|NP_247411.1| - 0.081 12.7 1.2 0.088 12.5 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) EmrE PF13536.1 gi|15668613|ref|NP_247411.1| - 0.091 12.9 2.3 0.12 12.6 1.6 1.1 1 0 0 1 1 1 0 Multidrug resistance efflux transporter ATP_synt_I PF03899.10 gi|15668613|ref|NP_247411.1| - 0.24 11.6 4.8 2.8 8.1 4.1 1.8 1 1 1 2 2 2 0 ATP synthase I chain UPF0020 PF01170.13 gi|15668614|ref|NP_247412.1| - 2.1e-66 222.9 0.0 2.7e-66 222.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.12 gi|15668614|ref|NP_247412.1| - 3.8e-32 111.1 2.7 3.8e-32 111.1 1.9 1.9 2 0 0 2 2 2 1 THUMP domain Methyltransf_26 PF13659.1 gi|15668614|ref|NP_247412.1| - 1.9e-17 63.3 0.0 7.1e-17 61.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15668614|ref|NP_247412.1| - 4.1e-07 29.7 2.7 8.7e-06 25.4 1.9 2.3 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15668614|ref|NP_247412.1| - 6.2e-07 28.9 0.1 2.1e-06 27.2 0.1 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_15 PF09445.5 gi|15668614|ref|NP_247412.1| - 1.2e-06 28.1 0.1 4.4e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase N6_N4_Mtase PF01555.13 gi|15668614|ref|NP_247412.1| - 4e-05 23.2 0.1 0.00071 19.1 0.0 2.7 2 1 0 2 2 2 1 DNA methylase Methyltransf_25 PF13649.1 gi|15668614|ref|NP_247412.1| - 0.00012 22.3 0.0 0.00029 21.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.6 gi|15668614|ref|NP_247412.1| - 0.00026 21.2 0.2 0.0033 17.7 0.0 2.3 2 0 0 2 2 2 1 Eco57I restriction-modification methylase Methyltransf_18 PF12847.2 gi|15668614|ref|NP_247412.1| - 0.00038 20.9 0.0 0.0012 19.4 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|15668614|ref|NP_247412.1| - 0.00056 19.0 0.1 0.00092 18.3 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family N6_Mtase PF02384.11 gi|15668614|ref|NP_247412.1| - 0.00089 18.4 0.9 0.015 14.3 0.1 3.3 2 1 0 2 2 2 1 N-6 DNA Methylase Methyltransf_3 PF01596.12 gi|15668614|ref|NP_247412.1| - 0.0098 14.9 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_11 PF08241.7 gi|15668614|ref|NP_247412.1| - 0.024 15.1 0.0 0.067 13.6 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain DUF1253 PF06862.7 gi|15668614|ref|NP_247412.1| - 0.027 12.9 0.0 0.039 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1253) Arch_ATPase PF01637.13 gi|15668615|ref|NP_247413.1| - 2.5e-86 289.2 8.6 2.5e-86 289.2 5.9 1.9 2 0 0 2 2 2 1 Archaeal ATPase RNA12 PF10443.4 gi|15668615|ref|NP_247413.1| - 5.7e-07 28.3 0.4 0.00024 19.7 0.2 2.6 2 1 0 2 2 2 2 RNA12 protein AAA_22 PF13401.1 gi|15668615|ref|NP_247413.1| - 5.8e-07 29.7 0.1 6.7e-06 26.2 0.0 2.5 1 1 2 3 3 3 1 AAA domain AAA PF00004.24 gi|15668615|ref|NP_247413.1| - 5.4e-06 26.6 1.2 0.00036 20.7 0.0 3.0 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|15668615|ref|NP_247413.1| - 6.8e-06 26.1 0.0 3.2e-05 24.0 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.1 gi|15668615|ref|NP_247413.1| - 1.7e-05 24.7 13.6 0.0021 17.9 0.1 3.5 1 1 2 3 3 3 2 AAA domain Zot PF05707.7 gi|15668615|ref|NP_247413.1| - 0.00069 19.1 0.1 0.0034 16.8 0.0 2.1 2 1 0 2 2 2 1 Zonular occludens toxin (Zot) MobB PF03205.9 gi|15668615|ref|NP_247413.1| - 0.013 15.2 2.7 0.043 13.5 0.0 3.1 3 1 1 4 4 4 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_10 PF12846.2 gi|15668615|ref|NP_247413.1| - 0.018 14.5 0.1 2.2 7.6 0.0 2.6 2 1 1 3 3 3 0 AAA-like domain TK PF00265.13 gi|15668615|ref|NP_247413.1| - 0.035 13.6 1.2 0.64 9.5 0.0 2.8 2 1 1 3 3 3 0 Thymidine kinase cobW PF02492.14 gi|15668615|ref|NP_247413.1| - 0.038 13.4 0.0 0.17 11.2 0.0 2.0 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.17 gi|15668615|ref|NP_247413.1| - 0.071 13.2 0.1 0.69 10.1 0.0 2.6 2 1 1 3 3 3 0 RNA helicase DUF2075 PF09848.4 gi|15668615|ref|NP_247413.1| - 0.13 11.2 1.0 1.1 8.1 0.7 2.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) FTCD_C PF04961.7 gi|15668615|ref|NP_247413.1| - 0.46 9.8 2.2 0.51 9.7 0.6 1.7 2 0 0 2 2 2 0 Formiminotransferase-cyclodeaminase MMR_HSR1 PF01926.18 gi|15668615|ref|NP_247413.1| - 3.1 7.7 5.5 1.1 9.1 1.3 2.2 2 2 0 2 2 2 0 50S ribosome-binding GTPase DUF63 PF01889.12 gi|15668616|ref|NP_247414.1| - 1.4e-92 310.6 23.4 1.7e-92 310.3 16.2 1.1 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 EpsG PF14897.1 gi|15668616|ref|NP_247414.1| - 0.17 10.8 33.5 0.31 9.9 9.3 2.2 1 1 1 2 2 2 0 EpsG family TauE PF01925.14 gi|15668617|ref|NP_247415.1| - 1.2e-47 162.4 28.0 1.3e-47 162.2 19.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3767 PF12597.3 gi|15668617|ref|NP_247415.1| - 5.8 6.6 6.0 6.1 6.5 0.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3767) cobW PF02492.14 gi|15668618|ref|NP_247416.1| - 5.7e-44 149.6 2.3 7.4e-44 149.3 1.6 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|15668618|ref|NP_247416.1| - 6.9e-09 34.8 1.9 1.2e-07 30.8 1.3 2.1 1 1 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|15668618|ref|NP_247416.1| - 5.5e-06 26.1 0.3 0.0005 19.7 0.0 2.5 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|15668618|ref|NP_247416.1| - 0.0002 20.8 0.1 0.00046 19.6 0.1 1.7 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain NTPase_1 PF03266.10 gi|15668618|ref|NP_247416.1| - 0.0019 17.8 0.0 0.0043 16.7 0.0 1.6 1 0 0 1 1 1 1 NTPase AAA_16 PF13191.1 gi|15668618|ref|NP_247416.1| - 0.01 15.8 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain KAP_NTPase PF07693.9 gi|15668618|ref|NP_247416.1| - 0.025 13.5 0.0 0.041 12.8 0.0 1.5 1 1 0 1 1 1 0 KAP family P-loop domain TrwB_AAD_bind PF10412.4 gi|15668618|ref|NP_247416.1| - 0.03 12.9 0.0 0.041 12.4 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Pox_A32 PF04665.7 gi|15668618|ref|NP_247416.1| - 0.031 13.5 0.0 0.05 12.9 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein Arch_ATPase PF01637.13 gi|15668618|ref|NP_247416.1| - 0.045 13.4 0.0 0.082 12.5 0.0 1.5 1 0 0 1 1 1 0 Archaeal ATPase UPF0079 PF02367.12 gi|15668618|ref|NP_247416.1| - 0.046 13.3 0.0 0.096 12.3 0.0 1.5 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 Miro PF08477.8 gi|15668618|ref|NP_247416.1| - 0.05 14.1 0.1 21 5.6 0.0 2.9 2 1 0 2 2 2 0 Miro-like protein AAA_22 PF13401.1 gi|15668618|ref|NP_247416.1| - 0.081 13.0 0.0 0.2 11.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|15668618|ref|NP_247416.1| - 0.081 12.4 0.2 3.3 7.1 0.0 2.4 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein Arg_repressor_C PF02863.13 gi|15668618|ref|NP_247416.1| - 0.6 9.6 0.1 0.6 9.6 0.1 3.4 4 0 0 4 4 4 0 Arginine repressor, C-terminal domain KH_1 PF00013.24 gi|15668619|ref|NP_247417.1| - 7.5e-21 73.5 7.2 3.1e-11 42.7 0.8 2.7 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|15668619|ref|NP_247417.1| - 4.5e-10 38.9 4.1 0.00017 21.1 0.6 2.7 2 0 0 2 2 2 2 KH domain KH_2 PF07650.12 gi|15668619|ref|NP_247417.1| - 4.2e-05 23.0 10.1 0.0022 17.5 1.5 3.0 3 0 0 3 3 3 2 KH domain vWA-TerF-like PF10138.4 gi|15668619|ref|NP_247417.1| - 0.04 13.7 0.2 0.071 12.9 0.1 1.7 1 1 0 1 1 1 0 vWA found in TerF C terminus Ribosomal_L6 PF00347.18 gi|15668619|ref|NP_247417.1| - 0.11 12.9 1.6 0.29 11.6 0.1 2.4 2 0 0 2 2 2 0 Ribosomal protein L6 KH_5 PF13184.1 gi|15668619|ref|NP_247417.1| - 0.18 11.6 3.8 0.35 10.6 0.6 2.5 2 0 0 2 2 2 0 NusA-like KH domain KH_4 PF13083.1 gi|15668619|ref|NP_247417.1| - 0.29 10.8 10.9 1 9.0 0.3 3.4 3 1 0 3 3 3 0 KH domain RIO1 PF01163.17 gi|15668620|ref|NP_247418.1| - 4.2e-61 205.6 0.5 4.2e-61 205.6 0.3 1.6 2 0 0 2 2 2 1 RIO1 family APH PF01636.18 gi|15668620|ref|NP_247418.1| - 5.8e-05 22.9 0.0 0.00019 21.2 0.0 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.20 gi|15668620|ref|NP_247418.1| - 0.00099 18.3 0.0 0.0021 17.2 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.15 gi|15668620|ref|NP_247418.1| - 0.018 14.6 0.4 0.092 12.2 0.1 2.2 1 1 0 2 2 2 0 Choline/ethanolamine kinase DUF4294 PF14127.1 gi|15668620|ref|NP_247418.1| - 0.037 13.6 2.2 0.077 12.5 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4294) Fructosamin_kin PF03881.9 gi|15668620|ref|NP_247418.1| - 0.069 12.1 0.4 0.27 10.1 0.0 2.1 3 0 0 3 3 3 0 Fructosamine kinase Frigida PF07899.6 gi|15668620|ref|NP_247418.1| - 0.74 8.5 4.7 0.62 8.7 1.8 1.8 2 0 0 2 2 2 0 Frigida-like protein eIF-1a PF01176.14 gi|15668621|ref|NP_247419.1| - 1.9e-26 91.2 2.3 3.4e-26 90.4 1.0 1.7 2 0 0 2 2 2 1 Translation initiation factor 1A / IF-1 Radical_SAM PF04055.16 gi|15668622|ref|NP_247420.1| - 1.4e-14 54.6 0.1 2.8e-14 53.6 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily BATS PF06968.8 gi|15668622|ref|NP_247420.1| - 0.045 13.5 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Biotin and Thiamin Synthesis associated domain Glyco_hydro_1 PF00232.13 gi|15668623|ref|NP_247421.1| - 0.063 11.4 0.4 0.079 11.1 0.2 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 ANT PF03374.9 gi|15668623|ref|NP_247421.1| - 0.1 12.6 0.1 0.91 9.5 0.0 2.0 2 0 0 2 2 2 0 Phage antirepressor protein KilAC domain Lactamase_B PF00753.22 gi|15668624|ref|NP_247422.1| - 4.8e-10 39.3 0.2 7.9e-10 38.7 0.1 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|15668624|ref|NP_247422.1| - 7.3e-07 28.9 0.0 9e-07 28.6 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|15668624|ref|NP_247422.1| - 4e-05 23.3 0.0 5.8e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain VP9 PF09625.5 gi|15668624|ref|NP_247422.1| - 0.091 12.5 0.5 0.21 11.4 0.2 1.7 2 0 0 2 2 2 0 VP9 protein Cation_efflux PF01545.16 gi|15668625|ref|NP_247423.1| - 9.2e-67 225.0 10.9 1e-66 224.9 7.5 1.0 1 0 0 1 1 1 1 Cation efflux family DUF1700 PF08006.6 gi|15668625|ref|NP_247423.1| - 1.7 7.9 11.3 0.081 12.2 1.4 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1700) PAP2 PF01569.16 gi|15668625|ref|NP_247423.1| - 6.7 6.4 15.7 0.61 9.7 0.5 4.0 1 1 2 3 3 3 0 PAP2 superfamily CBS PF00571.23 gi|15668626|ref|NP_247424.1| - 2.8e-22 78.2 4.8 3.1e-14 52.4 0.1 2.4 2 0 0 2 2 2 2 CBS domain m04gp34like PF12216.3 gi|15668626|ref|NP_247424.1| - 0.011 15.0 0.1 0.015 14.6 0.1 1.2 1 0 0 1 1 1 0 Immune evasion protein DUF99 PF01949.11 gi|15668626|ref|NP_247424.1| - 0.012 14.6 0.3 0.02 14.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF99 PRAI PF00697.17 gi|15668627|ref|NP_247425.1| - 2.4e-32 112.0 0.3 3.2e-32 111.7 0.2 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.12 gi|15668627|ref|NP_247425.1| - 0.089 11.8 0.0 0.19 10.8 0.0 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI DUF1890 PF09001.6 gi|15668628|ref|NP_247426.1| - 2.7e-52 176.4 0.0 3.1e-52 176.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) DUF1894 PF08979.6 gi|15668629|ref|NP_247427.1| - 5.8e-36 122.4 1.3 6.5e-36 122.2 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF2951 PF11166.3 gi|15668629|ref|NP_247427.1| - 0.073 12.9 3.8 0.15 11.9 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) IF-2B PF01008.12 gi|15668630|ref|NP_247428.1| - 1.7e-88 296.2 0.0 2.1e-88 295.9 0.0 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family DUF1847 PF08901.6 gi|15668631|ref|NP_247429.1| - 5.1e-65 217.7 7.4 6e-65 217.5 5.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1847) CitMHS PF03600.11 gi|15668632|ref|NP_247430.1| - 3.9e-17 61.8 27.9 3.9e-17 61.8 19.3 1.7 1 1 1 2 2 2 1 Citrate transporter Peptidase_M20 PF01546.23 gi|15668633|ref|NP_247431.1| - 6.9e-32 110.4 0.0 8.5e-32 110.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|15668633|ref|NP_247431.1| - 4.1e-16 58.7 0.4 2.2e-15 56.3 0.0 2.2 3 0 0 3 3 3 1 Peptidase dimerisation domain Peptidase_M28 PF04389.12 gi|15668633|ref|NP_247431.1| - 0.0042 16.8 0.0 0.0089 15.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M28 Pilin_PilX PF11530.3 gi|15668633|ref|NP_247431.1| - 0.13 11.9 1.9 1.6 8.3 0.2 2.8 3 0 0 3 3 3 0 Minor type IV pilin, PilX Melibiase PF02065.13 gi|15668633|ref|NP_247431.1| - 0.14 10.7 0.8 0.19 10.3 0.0 1.5 2 0 0 2 2 2 0 Melibiase AA_kinase PF00696.23 gi|15668634|ref|NP_247432.1| - 3.5e-17 62.7 0.7 7.3e-17 61.7 0.5 1.5 1 1 0 1 1 1 1 Amino acid kinase family DUF1610 PF07754.6 gi|15668635|ref|NP_247433.1| - 2e-20 72.4 21.2 1.9e-13 50.2 3.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) zf-HIT PF04438.11 gi|15668635|ref|NP_247433.1| - 0.00036 20.0 13.0 0.043 13.4 3.3 3.1 3 0 0 3 3 3 1 HIT zinc finger zf-H2C2_2 PF13465.1 gi|15668635|ref|NP_247433.1| - 0.00065 19.8 13.9 0.25 11.7 0.8 3.8 4 0 0 4 4 4 2 Zinc-finger double domain DUF2296 PF10058.4 gi|15668635|ref|NP_247433.1| - 0.0013 18.3 12.0 0.9 9.3 0.1 3.8 3 1 0 3 3 3 2 Predicted integral membrane metal-binding protein (DUF2296) zf-RING_3 PF14369.1 gi|15668635|ref|NP_247433.1| - 0.0074 16.2 1.0 0.0074 16.2 0.7 2.5 1 1 2 3 3 3 1 zinc-finger DZR PF12773.2 gi|15668635|ref|NP_247433.1| - 0.011 15.5 13.2 0.48 10.2 9.5 2.6 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.14 gi|15668635|ref|NP_247433.1| - 0.015 14.9 1.1 0.015 14.9 0.8 2.1 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_4 PF13717.1 gi|15668635|ref|NP_247433.1| - 0.016 14.9 15.0 3.3 7.4 2.5 4.0 3 1 0 3 3 3 0 zinc-ribbon domain PolC_DP2 PF03833.8 gi|15668635|ref|NP_247433.1| - 0.016 12.8 6.5 0.018 12.7 4.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc_ribbon_2 PF13240.1 gi|15668635|ref|NP_247433.1| - 0.019 14.4 18.0 0.024 14.0 1.6 3.4 2 2 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15668635|ref|NP_247433.1| - 0.02 14.4 14.7 3.1 7.4 2.3 4.0 3 1 0 3 3 3 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|15668635|ref|NP_247433.1| - 0.078 12.6 11.2 0.26 10.9 0.6 2.3 1 1 1 2 2 2 0 Putative transposase DNA-binding domain C1_3 PF07649.7 gi|15668635|ref|NP_247433.1| - 0.091 12.8 1.8 0.091 12.8 1.3 2.7 3 0 0 3 3 2 0 C1-like domain zf-ribbon_3 PF13248.1 gi|15668635|ref|NP_247433.1| - 0.11 11.7 19.4 5.3 6.3 3.7 3.9 1 1 1 2 2 2 0 zinc-ribbon domain DUF4215 PF13948.1 gi|15668635|ref|NP_247433.1| - 0.34 11.1 4.3 0.94 9.7 3.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4215) zf-TFIIB PF13453.1 gi|15668635|ref|NP_247433.1| - 0.51 9.5 12.8 1.4 8.1 4.6 2.6 2 1 0 2 2 2 0 Transcription factor zinc-finger A2L_zn_ribbon PF08792.5 gi|15668635|ref|NP_247433.1| - 0.58 9.6 12.7 5.6 6.5 0.1 3.8 3 1 1 4 4 4 0 A2L zinc ribbon domain Zn-ribbon_8 PF09723.5 gi|15668635|ref|NP_247433.1| - 0.68 9.9 16.5 0.3 11.0 1.2 3.2 1 1 0 2 2 2 0 Zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|15668635|ref|NP_247433.1| - 0.75 9.6 11.6 0.37 10.6 3.4 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-MYND PF01753.13 gi|15668635|ref|NP_247433.1| - 0.81 9.6 10.3 2.2 8.2 0.3 2.3 1 1 0 2 2 2 0 MYND finger zf-Mss51 PF13824.1 gi|15668635|ref|NP_247433.1| - 0.85 9.5 12.5 2.4 8.1 1.5 2.6 2 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Ribosomal_L37ae PF01780.14 gi|15668635|ref|NP_247433.1| - 0.91 9.4 7.8 1.1 9.1 0.3 2.6 1 1 0 2 2 2 0 Ribosomal L37ae protein family zf-AN1 PF01428.11 gi|15668635|ref|NP_247433.1| - 0.96 9.3 13.9 1.5 8.7 2.4 3.0 2 1 1 3 3 3 0 AN1-like Zinc finger zf-UBP PF02148.14 gi|15668635|ref|NP_247433.1| - 1 9.5 6.7 0.82 9.8 0.6 2.5 2 1 1 3 3 3 0 Zn-finger in ubiquitin-hydrolases and other protein C1_1 PF00130.17 gi|15668635|ref|NP_247433.1| - 1 9.1 8.4 1.8 8.3 0.9 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-CHY PF05495.7 gi|15668635|ref|NP_247433.1| - 1.1 9.4 10.8 11 6.2 7.5 2.2 1 1 0 1 1 1 0 CHY zinc finger TFIIS_C PF01096.13 gi|15668635|ref|NP_247433.1| - 1.2 8.8 16.7 5 6.8 0.2 3.9 3 1 1 4 4 4 0 Transcription factor S-II (TFIIS) DUF1272 PF06906.6 gi|15668635|ref|NP_247433.1| - 1.2 9.0 13.9 25 4.8 9.7 2.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zf-RING_5 PF14634.1 gi|15668635|ref|NP_247433.1| - 1.5 8.6 12.6 1 9.1 1.9 2.2 2 1 0 2 2 2 0 zinc-RING finger domain Zn_Tnp_IS1595 PF12760.2 gi|15668635|ref|NP_247433.1| - 1.7 8.5 18.0 2.5 7.9 9.2 3.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|15668635|ref|NP_247433.1| - 1.7 8.1 16.8 1 8.9 1.2 3.2 1 1 2 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit IBR PF01485.16 gi|15668635|ref|NP_247433.1| - 1.8 8.5 12.0 6.8 6.6 8.3 2.1 1 1 0 1 1 1 0 IBR domain zf-B_box PF00643.19 gi|15668635|ref|NP_247433.1| - 1.9 8.4 9.4 14 5.6 4.0 2.8 2 1 0 2 2 2 0 B-box zinc finger TF_Zn_Ribbon PF08271.7 gi|15668635|ref|NP_247433.1| - 1.9 7.8 17.6 0.28 10.5 2.9 3.1 2 1 2 4 4 4 0 TFIIB zinc-binding TerY-C PF15616.1 gi|15668635|ref|NP_247433.1| - 2.2 8.2 10.4 3.1 7.7 6.2 1.9 1 1 1 2 2 2 0 TerY-C metal binding domain Elf1 PF05129.8 gi|15668635|ref|NP_247433.1| - 2.4 7.9 11.9 38 4.0 8.2 2.6 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C3HC4_4 PF15227.1 gi|15668635|ref|NP_247433.1| - 2.7 7.9 12.5 0.11 12.4 1.3 2.4 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-ISL3 PF14690.1 gi|15668635|ref|NP_247433.1| - 3.3 7.8 16.0 3.6 7.6 0.5 3.4 3 1 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ZZ PF00569.12 gi|15668635|ref|NP_247433.1| - 3.3 7.3 10.2 98 2.6 4.5 3.1 2 1 0 2 2 2 0 Zinc finger, ZZ type C1_4 PF07975.7 gi|15668635|ref|NP_247433.1| - 3.4 7.7 11.8 1.9e+02 2.1 8.2 2.7 1 1 0 1 1 1 0 TFIIH C1-like domain Zn_Tnp_IS91 PF14319.1 gi|15668635|ref|NP_247433.1| - 3.4 7.1 10.2 0.93 9.0 0.5 2.1 1 1 1 2 2 2 0 Transposase zinc-binding domain ADK_lid PF05191.9 gi|15668635|ref|NP_247433.1| - 3.8 7.2 8.8 10 5.8 0.2 3.4 4 0 0 4 4 4 0 Adenylate kinase, active site lid zf-NADH-PPase PF09297.6 gi|15668635|ref|NP_247433.1| - 4.1 6.9 14.3 7.4 6.1 0.0 3.9 3 1 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain Rubredoxin PF00301.15 gi|15668635|ref|NP_247433.1| - 5.2 7.0 16.3 8.5 6.3 1.2 3.4 2 2 1 3 3 3 0 Rubredoxin Prok-RING_1 PF14446.1 gi|15668635|ref|NP_247433.1| - 7.6 6.3 13.1 2.2 8.0 0.9 3.1 1 1 2 3 3 3 0 Prokaryotic RING finger family 1 Transp_Tc5_C PF04236.10 gi|15668635|ref|NP_247433.1| - 8.3 6.7 9.2 0.7 10.1 2.9 1.9 2 1 0 2 2 1 0 Tc5 transposase C-terminal domain EF1_GNE PF00736.14 gi|15668636|ref|NP_247434.1| - 6.3e-20 70.6 1.6 6.6e-20 70.5 1.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain MAP PF03642.8 gi|15668636|ref|NP_247434.1| - 0.055 13.7 0.0 0.06 13.5 0.0 1.2 1 0 0 1 1 1 0 MAP domain Ribosomal_L22 PF00237.14 gi|15668637|ref|NP_247435.1| - 5.4e-38 129.1 0.8 6.7e-38 128.8 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.15 gi|15668638|ref|NP_247436.1| - 6.2e-19 67.9 1.8 6.3e-19 67.9 0.3 1.6 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|15668638|ref|NP_247436.1| - 2.3e-17 62.2 0.9 7.7e-17 60.6 0.0 2.2 2 0 0 2 2 2 1 KH domain KH_1 PF00013.24 gi|15668638|ref|NP_247436.1| - 0.009 15.6 0.2 0.009 15.6 0.1 2.1 3 0 0 3 3 3 1 KH domain KH_3 PF13014.1 gi|15668638|ref|NP_247436.1| - 0.025 14.2 0.1 0.025 14.2 0.1 2.3 3 0 0 3 3 3 0 KH domain KH_5 PF13184.1 gi|15668638|ref|NP_247436.1| - 0.03 14.1 0.0 0.081 12.7 0.0 1.8 1 0 0 1 1 1 0 NusA-like KH domain KH_4 PF13083.1 gi|15668638|ref|NP_247436.1| - 0.071 12.7 0.2 0.28 10.8 0.1 2.1 1 1 1 2 2 2 0 KH domain Ribosomal_L29 PF00831.18 gi|15668639|ref|NP_247437.1| - 9.6e-23 79.6 1.9 1.1e-22 79.4 1.3 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein DUF1192 PF06698.6 gi|15668639|ref|NP_247437.1| - 0.021 14.6 0.6 0.021 14.6 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) MRP-L47 PF06984.8 gi|15668639|ref|NP_247437.1| - 0.048 13.5 0.3 0.077 12.9 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) CobT PF06213.7 gi|15668639|ref|NP_247437.1| - 0.1 11.7 0.4 0.097 11.7 0.3 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT SUI1 PF01253.17 gi|15668640|ref|NP_247438.1| - 1.9e-25 88.4 1.9 2.3e-25 88.2 1.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.10 gi|15668640|ref|NP_247438.1| - 0.015 14.4 1.7 0.022 13.9 1.2 1.2 1 0 0 1 1 1 0 DTW domain UPF0086 PF01868.11 gi|15668641|ref|NP_247439.1| - 1.9e-35 120.3 1.6 2.1e-35 120.2 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Alpha-amyl_C PF09071.5 gi|15668641|ref|NP_247439.1| - 0.095 12.4 0.2 0.29 10.9 0.1 1.8 1 1 0 1 1 1 0 Alpha-amylase, C terminal CsrA PF02599.11 gi|15668641|ref|NP_247439.1| - 0.13 11.9 1.6 0.29 10.8 0.0 2.2 2 1 0 2 2 2 0 Global regulator protein family Myosin_N PF02736.14 gi|15668641|ref|NP_247439.1| - 2.5 7.8 5.0 1 9.1 1.8 1.6 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain Ribosomal_S17 PF00366.15 gi|15668642|ref|NP_247440.1| - 1.3e-27 95.6 5.8 1.7e-27 95.2 4.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 DUF2535 PF10751.4 gi|15668642|ref|NP_247440.1| - 0.13 12.4 0.1 0.26 11.4 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2535) Ribosomal_L14 PF00238.14 gi|15668643|ref|NP_247441.1| - 1.4e-36 124.9 0.5 1.5e-36 124.7 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L19 PF01245.15 gi|15668643|ref|NP_247441.1| - 0.028 14.1 0.1 0.039 13.7 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L19 KOW PF00467.24 gi|15668644|ref|NP_247442.1| - 3.4e-09 36.0 1.7 3.4e-09 36.0 1.2 1.6 2 0 0 2 2 2 1 KOW motif AAL_decarboxy PF03306.8 gi|15668644|ref|NP_247442.1| - 0.035 13.1 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase Ribosomal_S4e PF00900.15 gi|15668645|ref|NP_247443.1| - 2.6e-29 100.6 1.0 5.1e-29 99.7 0.7 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|15668645|ref|NP_247443.1| - 3.2e-16 58.8 5.4 5.3e-16 58.1 3.8 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.20 gi|15668645|ref|NP_247443.1| - 1.7e-08 33.7 1.6 7.3e-08 31.7 0.1 2.3 2 0 0 2 2 2 1 S4 domain KOW PF00467.24 gi|15668645|ref|NP_247443.1| - 0.00011 21.7 0.4 0.00011 21.7 0.3 2.4 2 0 0 2 2 2 1 KOW motif S4_2 PF13275.1 gi|15668645|ref|NP_247443.1| - 0.01 15.4 0.8 0.036 13.6 0.1 2.2 2 0 0 2 2 2 0 S4 domain Cadherin-like PF12733.2 gi|15668645|ref|NP_247443.1| - 0.05 13.8 0.1 0.095 12.9 0.1 1.5 1 0 0 1 1 1 0 Cadherin-like beta sandwich domain Ribosomal_L5_C PF00673.16 gi|15668646|ref|NP_247444.1| - 3.3e-30 103.6 0.0 6.5e-30 102.7 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|15668646|ref|NP_247444.1| - 4.8e-23 80.7 0.1 9.7e-23 79.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.16 gi|15669881|ref|NP_247445.1| - 8.6e-17 60.2 2.4 9.2e-17 60.1 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.9 gi|15669881|ref|NP_247445.1| - 0.069 12.7 4.1 0.14 11.8 2.8 1.5 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS Ribosomal_S8 PF00410.14 gi|15668647|ref|NP_247446.1| - 1.9e-27 95.6 0.0 2.4e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.18 gi|15668648|ref|NP_247447.1| - 1.5e-33 115.1 11.9 1.7e-16 60.4 2.5 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.16 gi|15668648|ref|NP_247447.1| - 1.7 8.5 8.2 3.6 7.4 0.7 3.3 2 2 1 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.13 gi|15668649|ref|NP_247448.1| - 9.3e-44 147.9 1.9 9.6e-44 147.9 0.8 1.3 1 1 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.15 gi|15668650|ref|NP_247449.1| - 4.6e-59 198.4 11.7 5.1e-59 198.3 8.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e SHOCT PF09851.4 gi|15668650|ref|NP_247449.1| - 0.082 12.4 1.6 1.4 8.5 0.1 2.6 2 0 0 2 2 2 0 Short C-terminal domain Pex19 PF04614.7 gi|15668650|ref|NP_247449.1| - 0.084 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Pex19 protein family DUF3391 PF11871.3 gi|15668650|ref|NP_247449.1| - 0.13 12.5 1.8 0.25 11.5 1.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3391) DUF4019 PF13211.1 gi|15668650|ref|NP_247449.1| - 0.17 12.1 1.7 2.1 8.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4019) Phage_GPA PF05840.8 gi|15668650|ref|NP_247449.1| - 0.24 10.0 3.6 2 7.0 0.5 2.0 2 0 0 2 2 2 0 Bacteriophage replication gene A protein (GPA) LepA_C PF06421.7 gi|15668650|ref|NP_247449.1| - 2.3 8.1 8.1 4.5 7.2 2.2 2.2 2 0 0 2 2 2 0 GTP-binding protein LepA C-terminus Ribosomal_L18p PF00861.17 gi|15668651|ref|NP_247450.1| - 1.4e-37 128.5 0.5 2e-37 128.0 0.4 1.2 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_L18_c PF14204.1 gi|15668651|ref|NP_247450.1| - 1.4e-15 57.6 1.2 2.7e-15 56.6 0.9 1.5 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_S5 PF00333.15 gi|15668652|ref|NP_247451.1| - 7.6e-30 102.4 5.8 7.6e-30 102.4 4.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|15668652|ref|NP_247451.1| - 1.3e-24 85.2 0.1 2.1e-24 84.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.15 gi|15668653|ref|NP_247452.1| - 5.2e-22 77.1 1.8 2.1e-21 75.2 0.3 2.2 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|15668654|ref|NP_247453.1| - 1.8e-40 138.2 2.1 2.3e-40 137.9 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 SecY PF00344.15 gi|15668655|ref|NP_247454.1| - 4.4e-88 295.5 28.0 5.7e-88 295.1 19.4 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|15668655|ref|NP_247454.1| - 1.9e-10 40.0 2.7 5.2e-09 35.4 0.2 3.5 3 0 0 3 3 3 1 Plug domain of Sec61p DUF2069 PF09842.4 gi|15668655|ref|NP_247454.1| - 0.22 11.4 0.1 0.22 11.4 0.1 2.9 3 0 0 3 3 3 0 Predicted membrane protein (DUF2069) Neur_chan_memb PF02932.11 gi|15668655|ref|NP_247454.1| - 4.6 7.0 5.7 0.72 9.6 0.2 2.0 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region AAA_18 PF13238.1 gi|15668656|ref|NP_247455.1| - 4.5e-17 62.5 0.2 6.3e-17 62.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15668656|ref|NP_247455.1| - 2e-07 31.8 0.0 2.7e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.13 gi|15668656|ref|NP_247455.1| - 9.5e-05 21.5 0.5 0.00014 21.0 0.1 1.4 2 0 0 2 2 2 1 6-phosphofructo-2-kinase SRP54 PF00448.17 gi|15668656|ref|NP_247455.1| - 0.00015 21.2 0.0 0.00018 21.0 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Zeta_toxin PF06414.7 gi|15668656|ref|NP_247455.1| - 0.0018 17.4 0.0 0.0033 16.5 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin NTPase_1 PF03266.10 gi|15668656|ref|NP_247455.1| - 0.0022 17.7 1.1 0.0032 17.1 0.2 1.7 2 0 0 2 2 2 1 NTPase AAA_19 PF13245.1 gi|15668656|ref|NP_247455.1| - 0.0033 17.1 0.1 0.0088 15.7 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain ArgK PF03308.11 gi|15668656|ref|NP_247455.1| - 0.0048 15.7 0.2 0.0092 14.7 0.1 1.4 1 0 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|15668656|ref|NP_247455.1| - 0.0054 16.4 0.3 0.013 15.2 0.2 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 gi|15668656|ref|NP_247455.1| - 0.006 16.4 0.0 0.013 15.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF1884 PF08967.5 gi|15668656|ref|NP_247455.1| - 0.0079 16.2 0.2 0.04 13.9 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1884) Arch_ATPase PF01637.13 gi|15668656|ref|NP_247455.1| - 0.011 15.4 0.6 0.017 14.8 0.4 1.3 1 1 0 1 1 1 0 Archaeal ATPase KTI12 PF08433.5 gi|15668656|ref|NP_247455.1| - 0.011 14.9 0.1 0.014 14.6 0.1 1.3 1 1 0 1 1 1 0 Chromatin associated protein KTI12 Peroxin-22 PF12827.2 gi|15668656|ref|NP_247455.1| - 0.015 15.0 0.1 0.032 13.9 0.1 1.8 1 1 0 1 1 1 0 Peroxisomal biogenesis protein family Glyco_trans_4_2 PF13477.1 gi|15668656|ref|NP_247455.1| - 0.017 14.9 0.1 0.22 11.3 0.0 2.2 1 1 1 2 2 2 0 Glycosyl transferase 4-like AAA_14 PF13173.1 gi|15668656|ref|NP_247455.1| - 0.036 13.9 0.2 0.076 12.9 0.1 1.8 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|15668656|ref|NP_247455.1| - 0.045 13.9 0.1 0.064 13.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|15668656|ref|NP_247455.1| - 0.058 12.2 0.2 0.073 11.9 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.7 gi|15668656|ref|NP_247455.1| - 0.069 12.8 0.0 0.097 12.3 0.0 1.3 1 1 0 1 1 1 0 NACHT domain DUF258 PF03193.11 gi|15668656|ref|NP_247455.1| - 0.07 12.3 0.2 0.11 11.7 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function, DUF258 APS_kinase PF01583.15 gi|15668656|ref|NP_247455.1| - 0.072 12.7 0.0 0.18 11.4 0.0 1.7 1 1 0 1 1 1 0 Adenylylsulphate kinase ATP_bind_1 PF03029.12 gi|15668656|ref|NP_247455.1| - 0.087 12.3 0.2 0.2 11.1 0.1 1.6 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_28 PF13521.1 gi|15668656|ref|NP_247455.1| - 0.24 11.3 1.1 0.92 9.4 0.2 2.2 2 1 0 2 2 2 0 AAA domain Guanylate_kin PF00625.16 gi|15668656|ref|NP_247455.1| - 0.42 10.0 3.2 3.3 7.1 0.1 2.9 2 1 1 3 3 3 0 Guanylate kinase DUF106 PF01956.11 gi|15668657|ref|NP_247456.1| - 9.7e-27 93.5 7.1 1.2e-26 93.2 4.9 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF106 DUF4079 PF13301.1 gi|15668657|ref|NP_247456.1| - 4.3e-05 23.6 0.5 6.8e-05 22.9 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4079) 60KD_IMP PF02096.15 gi|15668657|ref|NP_247456.1| - 4.8e-05 23.1 1.4 6.3e-05 22.7 1.0 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein IncA PF04156.9 gi|15668657|ref|NP_247456.1| - 0.0013 18.3 1.4 0.0019 17.8 1.0 1.2 1 0 0 1 1 1 1 IncA protein DUF2208 PF09973.4 gi|15668657|ref|NP_247456.1| - 0.0044 16.3 5.2 0.0057 15.9 3.6 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) DUF1564 PF07600.6 gi|15668657|ref|NP_247456.1| - 0.0054 16.0 1.3 0.0073 15.6 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1564) HAP1_N PF04849.8 gi|15668657|ref|NP_247456.1| - 0.043 12.7 3.8 0.055 12.4 2.6 1.0 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Bul1_C PF04426.7 gi|15668657|ref|NP_247456.1| - 0.07 12.3 1.9 0.091 11.9 1.3 1.1 1 0 0 1 1 1 0 Bul1 C terminus Uds1 PF15456.1 gi|15668657|ref|NP_247456.1| - 0.086 12.8 1.1 0.12 12.3 0.8 1.1 1 0 0 1 1 1 0 Up-regulated During Septation T2SF PF00482.18 gi|15668657|ref|NP_247456.1| - 0.14 12.1 0.4 0.14 12.1 0.3 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F TRAP-gamma PF07074.7 gi|15668657|ref|NP_247456.1| - 0.19 11.2 2.5 0.34 10.4 1.7 1.5 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) TcpE PF12648.2 gi|15668657|ref|NP_247456.1| - 0.23 11.5 12.8 0.1 12.7 0.5 2.7 2 1 1 3 3 3 0 TcpE family Sec34 PF04136.10 gi|15668657|ref|NP_247456.1| - 0.24 11.0 3.2 1 9.0 2.2 1.9 1 1 0 1 1 1 0 Sec34-like family DUF4446 PF14584.1 gi|15668657|ref|NP_247456.1| - 0.37 10.6 3.2 0.58 9.9 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF1600 PF07667.6 gi|15668657|ref|NP_247456.1| - 0.64 10.1 9.5 0.21 11.6 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1600) FlxA PF14282.1 gi|15668657|ref|NP_247456.1| - 1.5 8.8 5.5 1.9 8.4 3.8 1.1 1 0 0 1 1 1 0 FlxA-like protein T4SS PF07996.6 gi|15668657|ref|NP_247456.1| - 1.6 8.5 6.5 2.1 8.1 4.5 1.1 1 0 0 1 1 1 0 Type IV secretion system proteins Vpu PF00558.14 gi|15668657|ref|NP_247456.1| - 3 7.4 6.0 7.7 6.1 4.1 1.7 1 1 0 1 1 1 0 Vpu protein NYN PF01936.13 gi|15668658|ref|NP_247457.1| - 9.7e-27 94.0 0.1 1.5e-26 93.4 0.1 1.3 1 0 0 1 1 1 1 NYN domain DUF4325 PF14213.1 gi|15668658|ref|NP_247457.1| - 0.36 10.5 3.0 0.45 10.2 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4325) zinc_ribbon_2 PF13240.1 gi|15668659|ref|NP_247458.1| - 0.0035 16.7 13.4 0.42 10.1 0.0 3.6 3 0 0 3 3 3 2 zinc-ribbon domain zf-C2H2 PF00096.21 gi|15668659|ref|NP_247458.1| - 0.0043 17.3 13.2 0.49 10.8 0.7 3.5 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-ribbon_3 PF13248.1 gi|15668659|ref|NP_247458.1| - 0.0048 16.0 17.0 0.079 12.2 1.6 3.4 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.2 gi|15668659|ref|NP_247458.1| - 0.0083 15.9 12.6 0.01 15.6 3.9 2.3 2 0 0 2 2 2 1 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|15668659|ref|NP_247458.1| - 0.038 13.9 3.4 0.038 13.9 2.3 2.8 3 0 0 3 3 3 0 Zinc ribbon domain Ribosomal_S27e PF01667.12 gi|15668659|ref|NP_247458.1| - 0.041 13.4 1.9 0.041 13.4 1.3 2.3 2 1 0 2 2 2 0 Ribosomal protein S27 TF_Zn_Ribbon PF08271.7 gi|15668659|ref|NP_247458.1| - 0.043 13.1 11.2 0.08 12.2 2.5 2.7 2 1 0 2 2 2 0 TFIIB zinc-binding zf-Di19 PF05605.7 gi|15668659|ref|NP_247458.1| - 0.043 13.9 13.7 0.61 10.2 0.4 3.2 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding DUF164 PF02591.10 gi|15668659|ref|NP_247458.1| - 0.053 13.3 6.2 0.93 9.3 0.0 3.2 3 0 0 3 3 3 0 Putative zinc ribbon domain DUF2318 PF10080.4 gi|15668659|ref|NP_247458.1| - 0.068 12.9 2.5 0.16 11.7 1.7 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2318) Ribosomal_L37ae PF01780.14 gi|15668659|ref|NP_247458.1| - 0.07 13.0 4.2 0.96 9.3 0.1 2.5 2 1 0 2 2 2 0 Ribosomal L37ae protein family Sgf11 PF08209.6 gi|15668659|ref|NP_247458.1| - 0.082 12.2 8.9 1.3 8.3 0.1 3.3 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) zf-FCS PF06467.9 gi|15668659|ref|NP_247458.1| - 0.12 11.9 13.8 0.98 9.1 0.3 3.5 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif zf-RING_3 PF14369.1 gi|15668659|ref|NP_247458.1| - 0.13 12.2 10.2 4.8 7.2 0.0 3.3 3 0 0 3 3 3 0 zinc-finger zf-TFIIB PF13453.1 gi|15668659|ref|NP_247458.1| - 0.13 11.4 4.3 0.3 10.3 0.4 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-H2C2_2 PF13465.1 gi|15668659|ref|NP_247458.1| - 0.16 12.3 20.4 0.86 10.0 1.7 3.6 4 0 0 4 4 3 0 Zinc-finger double domain Cys_rich_CPXG PF14255.1 gi|15668659|ref|NP_247458.1| - 0.19 11.5 14.8 2.1 8.2 0.7 3.3 3 0 0 3 3 3 0 Cysteine-rich CPXCG DUF1610 PF07754.6 gi|15668659|ref|NP_247458.1| - 0.23 11.5 0.4 0.23 11.5 0.3 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF1610) FYVE PF01363.16 gi|15668659|ref|NP_247458.1| - 0.25 11.2 4.8 0.11 12.3 0.6 2.1 1 1 1 2 2 2 0 FYVE zinc finger zf-AN1 PF01428.11 gi|15668659|ref|NP_247458.1| - 0.27 11.1 12.8 0.48 10.3 0.2 3.3 3 0 0 3 3 3 0 AN1-like Zinc finger PhnA_Zn_Ribbon PF08274.7 gi|15668659|ref|NP_247458.1| - 0.32 10.8 7.2 6 6.7 0.1 3.2 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Prok-RING_1 PF14446.1 gi|15668659|ref|NP_247458.1| - 0.43 10.3 8.7 0.15 11.8 0.9 2.6 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 zf-ISL3 PF14690.1 gi|15668659|ref|NP_247458.1| - 0.59 10.2 14.5 4.4 7.4 0.3 3.3 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HNH PF01844.18 gi|15668659|ref|NP_247458.1| - 0.65 9.9 7.1 4.4 7.2 0.0 3.1 2 1 0 3 3 3 0 HNH endonuclease zf-C2H2_4 PF13894.1 gi|15668659|ref|NP_247458.1| - 0.76 10.2 13.5 2.1 8.8 0.7 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger CpXC PF14353.1 gi|15668659|ref|NP_247458.1| - 0.78 9.7 11.7 6.1 6.8 0.3 3.1 2 1 1 3 3 3 0 CpXC protein zinc_ribbon_5 PF13719.1 gi|15668659|ref|NP_247458.1| - 0.86 9.2 9.9 0.31 10.6 2.4 2.8 2 1 1 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15668659|ref|NP_247458.1| - 0.99 9.1 9.4 1.1 8.9 2.8 2.9 2 1 1 3 3 3 0 zinc-ribbon domain zf-C2H2_6 PF13912.1 gi|15668659|ref|NP_247458.1| - 1.2 9.1 6.3 21 5.1 0.1 3.6 4 0 0 4 4 3 0 C2H2-type zinc finger IBR PF01485.16 gi|15668659|ref|NP_247458.1| - 1.4 8.8 11.1 7.4 6.5 7.7 2.1 1 1 0 1 1 1 0 IBR domain zf-IS66 PF13005.2 gi|15668659|ref|NP_247458.1| - 1.5 8.8 8.7 9.1 6.3 0.5 3.2 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 zf-C4_Topoisom PF01396.14 gi|15668659|ref|NP_247458.1| - 1.8 8.1 12.0 1.1 8.8 0.6 3.4 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger C1_1 PF00130.17 gi|15668659|ref|NP_247458.1| - 1.9 8.2 9.0 1.8 8.3 2.7 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2HC5 PF06221.8 gi|15668659|ref|NP_247458.1| - 2.2 8.1 10.4 4.6 7.0 0.1 3.1 2 1 1 3 3 3 0 Putative zinc finger motif, C2HC5-type Lar_restr_allev PF14354.1 gi|15668659|ref|NP_247458.1| - 2.3 8.5 12.6 74 3.7 8.7 2.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar FYDLN_acid PF09538.5 gi|15668659|ref|NP_247458.1| - 2.7 8.6 8.8 6.5 7.3 3.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (FYDLN_acid) C1_4 PF07975.7 gi|15668659|ref|NP_247458.1| - 2.7 8.0 11.0 0.26 11.3 1.8 2.8 2 1 1 3 3 3 0 TFIIH C1-like domain DUF116 PF01976.12 gi|15668659|ref|NP_247458.1| - 3 7.3 8.9 0.67 9.4 3.0 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF116 zf-RING_2 PF13639.1 gi|15668659|ref|NP_247458.1| - 3.2 7.6 8.3 1.2 9.0 1.3 2.5 2 1 0 2 2 2 0 Ring finger domain DUF329 PF03884.9 gi|15668659|ref|NP_247458.1| - 3.4 7.2 14.1 7.9 6.1 0.2 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF329) zf-Mss51 PF13824.1 gi|15668659|ref|NP_247458.1| - 4.1 7.3 9.5 3.6 7.5 1.7 2.6 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2HC_2 PF13913.1 gi|15668659|ref|NP_247458.1| - 5.3 6.8 13.7 4.5 7.0 0.2 3.5 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-C3HC4_2 PF13923.1 gi|15668659|ref|NP_247458.1| - 5.4 7.1 9.4 1.1 9.3 1.5 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.1 gi|15668659|ref|NP_247458.1| - 7.8 6.2 11.1 3 7.5 0.1 3.1 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Molybdop_Fe4S4 PF04879.11 gi|15668659|ref|NP_247458.1| - 8.2 6.3 9.6 7 6.5 0.2 3.2 3 0 0 3 3 3 0 Molybdopterin oxidoreductase Fe4S4 domain UPF0547 PF10571.4 gi|15668659|ref|NP_247458.1| - 8.9 6.1 15.2 0.99 9.1 1.3 3.3 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Diphthamide_syn PF01866.12 gi|15668660|ref|NP_247459.1| - 2.1e-79 266.9 3.5 2.5e-77 260.1 2.4 2.1 1 1 0 1 1 1 1 Putative diphthamide synthesis protein DSPc PF00782.15 gi|15668660|ref|NP_247459.1| - 0.0063 16.1 0.2 0.0063 16.1 0.1 2.1 3 0 0 3 3 3 1 Dual specificity phosphatase, catalytic domain Ribosomal_S30AE PF02482.14 gi|15668660|ref|NP_247459.1| - 0.059 13.8 3.4 1.3 9.5 0.0 2.7 3 0 0 3 3 3 0 Sigma 54 modulation protein / S30EA ribosomal protein MS_channel PF00924.13 gi|15668660|ref|NP_247459.1| - 0.067 12.5 1.6 1.1 8.4 0.1 2.7 3 0 0 3 3 3 0 Mechanosensitive ion channel GATase_3 PF07685.9 gi|15668661|ref|NP_247460.1| - 1.9e-37 128.2 0.4 3.1e-37 127.5 0.3 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|15668661|ref|NP_247460.1| - 2.6e-35 121.5 0.1 4.5e-35 120.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|15668661|ref|NP_247460.1| - 1.6e-23 83.3 0.0 3.1e-23 82.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|15668661|ref|NP_247460.1| - 5.4e-07 29.3 0.1 2.8e-05 23.8 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SNO PF01174.14 gi|15668661|ref|NP_247460.1| - 0.0057 16.3 0.0 0.014 14.9 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family SRP54 PF00448.17 gi|15668661|ref|NP_247460.1| - 0.013 14.9 0.3 0.51 9.7 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_31 PF13614.1 gi|15668661|ref|NP_247460.1| - 0.013 15.4 0.0 0.036 13.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain DUF1611 PF07755.6 gi|15668661|ref|NP_247460.1| - 0.016 13.8 0.0 0.3 9.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1611) GATase PF00117.23 gi|15668661|ref|NP_247460.1| - 0.029 13.8 0.1 0.27 10.6 0.0 2.3 2 0 0 2 2 2 0 Glutamine amidotransferase class-I GATase_5 PF13507.1 gi|15668661|ref|NP_247460.1| - 0.043 12.7 0.0 0.074 11.9 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain AAA_17 PF13207.1 gi|15668661|ref|NP_247460.1| - 0.085 13.6 2.9 0.74 10.6 0.9 2.9 2 1 0 2 2 2 0 AAA domain VirC1 PF07015.6 gi|15668661|ref|NP_247460.1| - 0.089 11.8 0.0 0.15 11.1 0.0 1.4 1 0 0 1 1 1 0 VirC1 protein DJ-1_PfpI PF01965.19 gi|15668661|ref|NP_247460.1| - 0.12 11.7 0.0 0.28 10.6 0.0 1.6 1 1 0 1 1 1 0 DJ-1/PfpI family ATP_bind_3 PF01171.15 gi|15668662|ref|NP_247461.1| - 3.9e-16 59.0 0.0 1.2e-08 34.6 0.0 2.2 2 0 0 2 2 2 2 PP-loop family tRNA_Me_trans PF03054.11 gi|15668662|ref|NP_247461.1| - 0.00016 20.3 0.0 0.00021 19.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase YwqJ-deaminase PF14431.1 gi|15668662|ref|NP_247461.1| - 0.032 14.0 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 YwqJ-like deaminase Radical_SAM PF04055.16 gi|15668663|ref|NP_247462.1| - 7.6e-21 74.9 0.2 1.6e-20 73.9 0.1 1.6 2 0 0 2 2 2 1 Radical SAM superfamily DUF3083 PF11281.3 gi|15668663|ref|NP_247462.1| - 0.043 12.9 0.0 0.071 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3083) tRNA-synt_2d PF01409.15 gi|15668664|ref|NP_247463.1| - 9e-100 332.9 0.0 1.7e-99 332.0 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|15668664|ref|NP_247463.1| - 6.8e-09 35.5 0.9 5e-08 32.7 0.1 2.4 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.15 gi|15668664|ref|NP_247463.1| - 8.2e-06 24.8 12.6 0.00016 20.6 0.1 4.1 4 0 0 4 4 4 2 tRNA synthetases class II (D, K and N) tRNA-synt_His PF13393.1 gi|15668664|ref|NP_247463.1| - 0.0011 18.1 0.0 0.091 11.8 0.0 2.6 3 0 0 3 3 3 1 Histidyl-tRNA synthetase KIP1 PF07765.7 gi|15668664|ref|NP_247463.1| - 0.0037 17.0 0.5 0.015 15.1 0.4 2.0 1 0 0 1 1 1 1 KIP1-like protein Phage_C PF12025.3 gi|15668664|ref|NP_247463.1| - 0.047 13.6 0.4 0.16 11.9 0.3 2.0 1 0 0 1 1 1 0 Phage protein C HTH_45 PF14947.1 gi|15668664|ref|NP_247463.1| - 0.1 12.4 7.9 0.069 12.9 3.0 2.6 2 1 0 2 2 2 0 Winged helix-turn-helix DUF3236 PF11576.3 gi|15668665|ref|NP_247464.1| - 2.6e-75 250.9 4.6 3e-75 250.8 3.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3236) IMS PF00817.15 gi|15668665|ref|NP_247464.1| - 0.097 12.4 0.1 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 impB/mucB/samB family Toprim PF01751.17 gi|15668665|ref|NP_247464.1| - 0.098 12.6 1.0 0.21 11.5 0.5 1.7 2 0 0 2 2 2 0 Toprim domain DUF1188 PF06690.6 gi|15668666|ref|NP_247465.1| - 1e-108 362.2 3.1 1.1e-108 362.0 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1188) 3HCDH_N PF02737.13 gi|15668666|ref|NP_247465.1| - 0.035 13.7 0.1 0.16 11.6 0.0 2.0 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ParBc_2 PF08857.6 gi|15668666|ref|NP_247465.1| - 0.079 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative ParB-like nuclease Ldh_1_N PF00056.18 gi|15668667|ref|NP_247466.1| - 6.1e-34 116.8 0.3 1e-33 116.1 0.2 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|15668667|ref|NP_247466.1| - 3.2e-32 111.6 0.0 5.5e-32 110.8 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain UDPG_MGDP_dh_N PF03721.9 gi|15668667|ref|NP_247466.1| - 1.4e-05 24.5 0.1 2.2e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Semialdhyde_dh PF01118.19 gi|15668667|ref|NP_247466.1| - 0.00015 22.0 0.0 0.00026 21.2 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|15668667|ref|NP_247466.1| - 0.0015 18.9 0.1 0.0038 17.6 0.0 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short PF00106.20 gi|15668667|ref|NP_247466.1| - 0.0075 16.1 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase DapB_N PF01113.15 gi|15668667|ref|NP_247466.1| - 0.015 15.2 0.1 0.052 13.4 0.0 1.9 1 1 1 2 2 2 0 Dihydrodipicolinate reductase, N-terminus NAD_Gly3P_dh_N PF01210.18 gi|15668667|ref|NP_247466.1| - 0.018 14.7 0.0 0.055 13.2 0.0 1.8 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Saccharop_dh PF03435.13 gi|15668667|ref|NP_247466.1| - 0.032 13.2 0.1 0.085 11.8 0.0 1.7 2 0 0 2 2 2 0 Saccharopine dehydrogenase DUF2120 PF09893.4 gi|15668668|ref|NP_247467.1| - 2e-60 202.9 5.0 2.6e-60 202.5 3.4 1.2 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) PSDC PF12588.3 gi|15668668|ref|NP_247467.1| - 0.018 14.6 0.0 0.12 11.9 0.0 1.9 2 0 0 2 2 2 0 Phophatidylserine decarboxylase MAS20 PF02064.10 gi|15668668|ref|NP_247467.1| - 0.09 12.6 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 MAS20 protein import receptor DUF3972 PF13118.1 gi|15668669|ref|NP_247468.1| - 0.0056 16.7 2.9 0.0066 16.5 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3972) DUF643 PF04867.7 gi|15668669|ref|NP_247468.1| - 0.0074 16.6 2.9 0.021 15.2 2.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF643) Pox_A14 PF05767.7 gi|15668669|ref|NP_247468.1| - 0.01 15.7 0.4 0.018 15.0 0.3 1.4 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF658 PF04936.7 gi|15668669|ref|NP_247468.1| - 0.018 14.8 0.6 0.022 14.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF658) CAMP_factor PF07373.6 gi|15668669|ref|NP_247468.1| - 0.021 14.3 2.1 0.025 14.0 1.5 1.0 1 0 0 1 1 1 0 CAMP factor (Cfa) WHEP-TRS PF00458.15 gi|15668669|ref|NP_247468.1| - 0.032 13.9 0.3 0.076 12.7 0.0 1.8 2 0 0 2 2 2 0 WHEP-TRS domain DUF1666 PF07891.7 gi|15668669|ref|NP_247468.1| - 0.053 12.9 0.9 0.06 12.7 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) DUF4446 PF14584.1 gi|15668669|ref|NP_247468.1| - 0.062 13.1 0.8 0.085 12.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4006 PF13179.1 gi|15668669|ref|NP_247468.1| - 0.087 12.3 0.5 0.13 11.8 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF4006) DUF2909 PF11137.3 gi|15668669|ref|NP_247468.1| - 0.089 12.5 1.7 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) DUF3201 PF11447.3 gi|15668669|ref|NP_247468.1| - 0.12 11.7 0.2 0.12 11.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3201) DUF3139 PF11337.3 gi|15668669|ref|NP_247468.1| - 0.16 12.2 2.9 0.19 11.9 1.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) DUF106 PF01956.11 gi|15668669|ref|NP_247468.1| - 0.19 11.2 1.1 0.22 11.0 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF106 QRPTase_C PF01729.14 gi|15668670|ref|NP_247469.1| - 6.4e-68 227.5 1.1 8e-68 227.2 0.7 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|15668670|ref|NP_247469.1| - 8.7e-25 86.3 0.0 1.5e-24 85.6 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.14 gi|15668670|ref|NP_247469.1| - 0.0054 15.8 0.0 0.013 14.5 0.0 1.6 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Pterin_bind PF00809.17 gi|15668670|ref|NP_247469.1| - 0.014 14.8 0.2 0.027 13.8 0.2 1.5 1 0 0 1 1 1 0 Pterin binding enzyme B12-binding PF02310.14 gi|15668670|ref|NP_247469.1| - 0.016 15.0 0.7 0.16 11.8 0.0 2.4 2 1 0 2 2 2 0 B12 binding domain Methyltransf_31 PF13847.1 gi|15668670|ref|NP_247469.1| - 0.052 13.1 1.0 0.084 12.4 0.3 1.7 2 0 0 2 2 2 0 Methyltransferase domain TMP-TENI PF02581.12 gi|15668670|ref|NP_247469.1| - 0.068 12.2 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI RNase_P_Rpp14 PF01900.14 gi|15668671|ref|NP_247470.1| - 1.1e-26 92.8 0.0 1.3e-26 92.5 0.0 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family GTP_EFTU PF00009.22 gi|15668672|ref|NP_247471.1| - 1.2e-40 138.9 1.1 2.1e-40 138.1 0.8 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.20 gi|15668672|ref|NP_247471.1| - 1.2e-11 44.5 0.3 1.2e-11 44.5 0.2 3.8 4 1 0 4 4 4 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|15668672|ref|NP_247471.1| - 2.6e-08 33.8 0.1 5.6e-08 32.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase ArgK PF03308.11 gi|15668672|ref|NP_247471.1| - 1.9e-07 30.1 0.3 7.1e-07 28.2 0.1 1.9 2 0 0 2 2 2 1 ArgK protein FeoB_N PF02421.13 gi|15668672|ref|NP_247471.1| - 7.8e-07 28.5 0.9 3.9e-06 26.2 0.6 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.4 gi|15668672|ref|NP_247471.1| - 6.6e-05 22.4 0.9 0.0027 17.1 0.1 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.5 gi|15668672|ref|NP_247471.1| - 0.00051 19.3 1.2 0.0014 17.8 0.6 1.9 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit Miro PF08477.8 gi|15668672|ref|NP_247471.1| - 0.0015 19.0 0.0 0.0036 17.7 0.0 1.7 1 0 0 1 1 1 1 Miro-like protein Arf PF00025.16 gi|15668672|ref|NP_247471.1| - 0.0043 16.3 0.1 0.0075 15.5 0.1 1.5 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU_D4 PF14578.1 gi|15668672|ref|NP_247471.1| - 0.0085 15.7 0.3 0.0085 15.7 0.2 2.6 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D3 PF03143.12 gi|15668672|ref|NP_247471.1| - 0.052 13.7 0.0 0.21 11.7 0.0 2.1 1 0 0 1 1 1 0 Elongation factor Tu C-terminal domain Ribosomal_L35Ae PF01247.13 gi|15668672|ref|NP_247471.1| - 0.08 12.7 0.0 0.29 10.9 0.1 2.0 2 1 0 2 2 2 0 Ribosomal protein L35Ae ATP_bind_1 PF03029.12 gi|15668672|ref|NP_247471.1| - 0.11 12.0 0.0 0.45 10.0 0.0 1.9 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein Hjc PF01870.13 gi|15668674|ref|NP_247473.1| - 3.3e-31 106.7 0.1 4.6e-31 106.2 0.1 1.2 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Mrr_cat PF04471.7 gi|15668674|ref|NP_247473.1| - 2.2e-05 24.2 0.0 2.4e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease FlbD PF06289.6 gi|15668674|ref|NP_247473.1| - 0.015 14.6 0.8 5.9 6.3 0.0 3.0 2 1 1 3 3 3 0 Flagellar protein (FlbD) YcfA PF07927.7 gi|15668674|ref|NP_247473.1| - 0.038 13.8 0.2 0.091 12.6 0.2 1.6 1 0 0 1 1 1 0 YcfA-like protein DUF2102 PF09875.4 gi|15668675|ref|NP_247474.1| - 2.2e-43 146.0 0.1 3.2e-43 145.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) BLUF PF04940.7 gi|15668675|ref|NP_247474.1| - 0.065 12.9 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Sensors of blue-light using FAD Aconitase PF00330.15 gi|15668676|ref|NP_247475.1| - 6.4e-89 298.5 7.1 5.9e-61 206.3 2.3 2.0 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF364 PF04016.7 gi|15668677|ref|NP_247476.1| - 4.9e-41 139.4 0.0 7.6e-41 138.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF364) DUF4213 PF13938.1 gi|15668677|ref|NP_247476.1| - 3e-16 59.3 0.0 7.3e-16 58.0 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4213) DUF2119 PF09892.4 gi|15668678|ref|NP_247477.1| - 9.4e-75 250.1 5.9 1.1e-74 249.9 4.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) DUF3692 PF12469.3 gi|15668678|ref|NP_247477.1| - 0.16 12.2 1.1 0.32 11.2 0.8 1.7 1 1 0 1 1 1 0 CRISPR-associated protein EPSP_synthase PF00275.15 gi|15668679|ref|NP_247478.1| - 5e-142 473.2 0.0 5.8e-142 473.0 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AHH PF14412.1 gi|15668679|ref|NP_247478.1| - 0.035 14.1 0.0 0.11 12.5 0.0 1.8 1 0 0 1 1 1 0 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH Ank_2 PF12796.2 gi|15668679|ref|NP_247478.1| - 0.13 12.5 0.0 0.41 11.0 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) HMGL-like PF00682.14 gi|15668680|ref|NP_247479.1| - 5e-75 252.1 0.5 6.8e-75 251.7 0.3 1.2 1 0 0 1 1 1 1 HMGL-like AP_endonuc_2 PF01261.19 gi|15668680|ref|NP_247479.1| - 0.00077 18.8 0.2 0.12 11.6 0.0 2.3 1 1 1 2 2 2 2 Xylose isomerase-like TIM barrel Bac_luciferase PF00296.15 gi|15668680|ref|NP_247479.1| - 0.13 11.4 0.0 0.29 10.2 0.0 1.5 2 0 0 2 2 2 0 Luciferase-like monooxygenase PK_C PF02887.11 gi|15668681|ref|NP_247480.1| - 1.3e-24 86.0 0.2 1.6e-24 85.7 0.2 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain DUF2334 PF10096.4 gi|15668682|ref|NP_247481.1| - 7.8e-25 87.7 7.8 9.9e-25 87.3 5.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_deac_1 PF01522.16 gi|15668682|ref|NP_247481.1| - 0.0037 16.8 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_trans_1_4 PF13692.1 gi|15668682|ref|NP_247481.1| - 0.091 12.9 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferases group 1 GATase PF00117.23 gi|15668683|ref|NP_247482.1| - 1.6e-38 132.1 0.0 1.7e-38 131.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|15668683|ref|NP_247482.1| - 2e-07 30.7 0.0 4.4e-07 29.6 0.0 1.6 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.14 gi|15668683|ref|NP_247482.1| - 1.2e-06 28.2 0.1 2.4e-06 27.2 0.1 1.5 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|15668683|ref|NP_247482.1| - 0.00059 19.3 0.4 0.0091 15.4 0.2 2.6 1 1 0 1 1 1 1 Peptidase C26 WI12 PF07107.6 gi|15668683|ref|NP_247482.1| - 0.13 12.1 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Wound-induced protein WI12 TBP PF00352.16 gi|15668684|ref|NP_247483.1| - 1.7e-70 232.4 0.2 6.3e-35 118.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|15668684|ref|NP_247483.1| - 2.3e-07 30.7 0.0 0.0066 16.4 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) CENP-F_C_Rb_bdg PF10490.4 gi|15668684|ref|NP_247483.1| - 0.003 16.8 0.3 1.8 7.9 0.1 2.3 2 0 0 2 2 2 2 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Integrase_AP2 PF14657.1 gi|15668684|ref|NP_247483.1| - 0.012 15.3 2.0 0.75 9.6 0.2 2.2 2 0 0 2 2 2 0 AP2-like DNA-binding integrase domain DUF155 PF02582.9 gi|15668684|ref|NP_247483.1| - 0.086 12.7 0.0 9.6 6.0 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Lip_prot_lig_C PF10437.4 gi|15668684|ref|NP_247483.1| - 0.091 12.4 0.1 9 6.0 0.0 2.7 3 1 0 3 3 3 0 Bacterial lipoate protein ligase C-terminus DUF3252 PF11623.3 gi|15668684|ref|NP_247483.1| - 0.099 12.0 0.0 10 5.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3252) Ribosomal_60s PF00428.14 gi|15668685|ref|NP_247484.1| - 8.3e-20 70.9 22.9 9.8e-20 70.7 15.8 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein PepSY_2 PF13670.1 gi|15668685|ref|NP_247484.1| - 0.023 14.6 10.6 0.89 9.5 0.0 2.2 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain GGDN PF05165.7 gi|15668685|ref|NP_247484.1| - 0.024 13.6 1.1 0.024 13.6 0.8 1.1 1 0 0 1 1 1 0 GGDN family VIGSSK PF14773.1 gi|15668685|ref|NP_247484.1| - 0.031 14.1 4.1 0.33 10.8 0.1 2.4 2 0 0 2 2 2 0 Helicase-associated putative binding domain, C-terminal DUF2637 PF10935.3 gi|15668685|ref|NP_247484.1| - 0.056 13.4 6.1 0.076 12.9 4.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2637) TFIID_30kDa PF03540.8 gi|15668685|ref|NP_247484.1| - 0.082 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor TFIID 23-30kDa subunit Sigma70_ner PF04546.8 gi|15668685|ref|NP_247484.1| - 0.13 11.8 3.0 0.15 11.6 2.1 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region ThiG PF05690.9 gi|15668685|ref|NP_247484.1| - 0.18 10.8 6.6 0.19 10.7 4.5 1.1 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG Ribosomal_L10 PF00466.15 gi|15668686|ref|NP_247485.1| - 6.8e-21 74.0 0.2 1.3e-20 73.1 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.14 gi|15668686|ref|NP_247485.1| - 2.5e-07 30.9 15.3 2.7e-07 30.8 9.5 2.0 2 0 0 2 2 2 1 60s Acidic ribosomal protein 7TMR-HDED PF07697.6 gi|15668686|ref|NP_247485.1| - 0.0094 15.7 0.1 0.0094 15.7 0.1 2.8 3 0 0 3 3 3 1 7TM-HD extracellular Ribosomal_L1 PF00687.16 gi|15668687|ref|NP_247486.1| - 3.5e-49 167.1 1.0 4.2e-49 166.8 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Thymidylat_synt PF00303.14 gi|15668688|ref|NP_247487.1| - 1.9e-35 122.1 0.9 1.4e-33 116.0 0.6 2.0 1 1 0 1 1 1 1 Thymidylate synthase L51_S25_CI-B8 PF05047.11 gi|15668688|ref|NP_247487.1| - 0.083 12.6 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain Stn1 PF10451.4 gi|15668690|ref|NP_247489.1| - 0.094 11.5 0.2 0.15 10.9 0.1 1.2 1 0 0 1 1 1 0 Telomere regulation protein Stn1 Fer4 PF00037.22 gi|15668691|ref|NP_247490.1| - 7.5e-49 161.4 68.3 8.1e-11 41.0 3.1 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668691|ref|NP_247490.1| - 9.8e-34 113.8 61.9 2e-09 36.8 3.0 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668691|ref|NP_247490.1| - 3.9e-30 103.4 56.7 7.2e-12 44.9 9.1 4.0 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668691|ref|NP_247490.1| - 8.8e-30 102.8 54.4 1.8e-10 41.0 9.6 3.6 2 1 0 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668691|ref|NP_247490.1| - 4.4e-29 100.0 79.5 5.6e-10 38.8 8.8 4.6 3 2 2 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668691|ref|NP_247490.1| - 1e-27 94.3 54.4 5.8e-06 25.9 2.5 6.4 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668691|ref|NP_247490.1| - 1.2e-27 95.8 93.3 4.9e-09 36.3 8.6 4.3 2 1 3 5 5 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668691|ref|NP_247490.1| - 3.9e-27 94.7 47.2 2.5e-05 24.9 1.0 6.3 6 0 0 6 6 6 6 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668691|ref|NP_247490.1| - 1.8e-18 66.2 47.0 3e-06 27.1 5.9 4.4 1 1 4 5 5 5 5 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668691|ref|NP_247490.1| - 1e-16 61.0 41.5 4.2e-06 27.0 4.9 5.3 3 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668691|ref|NP_247490.1| - 8.9e-15 53.6 60.5 0.00018 21.5 2.5 6.3 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668691|ref|NP_247490.1| - 3.5e-14 53.1 53.6 0.002 18.6 1.7 6.6 4 2 2 6 6 6 6 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15668691|ref|NP_247490.1| - 8.8e-14 51.6 58.2 0.00089 19.6 0.7 6.2 1 1 5 6 6 6 6 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668691|ref|NP_247490.1| - 1.2e-10 41.0 75.3 0.00011 22.4 3.6 6.2 6 0 0 6 6 6 5 4Fe-4S binding domain Fer4_13 PF13370.1 gi|15668691|ref|NP_247490.1| - 5.9e-10 39.3 53.3 0.032 14.6 1.5 6.8 6 1 1 7 7 7 6 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15668691|ref|NP_247490.1| - 2.6e-06 27.2 36.3 0.015 15.1 4.4 3.4 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668692|ref|NP_247491.1| - 4.2e-29 98.9 40.2 2e-09 36.6 3.0 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668692|ref|NP_247491.1| - 7.4e-24 82.5 35.1 3.7e-07 29.7 3.2 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668692|ref|NP_247491.1| - 1.8e-20 72.4 44.4 3.6e-10 39.4 9.5 2.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668692|ref|NP_247491.1| - 4.2e-20 71.8 27.3 5.5e-12 45.8 7.6 2.7 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668692|ref|NP_247491.1| - 4e-19 68.6 42.6 4.4e-10 39.6 9.5 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668692|ref|NP_247491.1| - 1.1e-17 63.6 45.3 3.2e-09 36.5 9.3 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668692|ref|NP_247491.1| - 4.3e-15 54.6 31.5 0.00038 20.1 2.7 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668692|ref|NP_247491.1| - 6e-14 52.5 30.0 3.3e-05 24.5 8.1 3.9 2 1 2 4 4 4 4 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668692|ref|NP_247491.1| - 1.5e-11 44.1 58.6 1.7e-05 24.7 8.5 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668692|ref|NP_247491.1| - 2.6e-10 39.7 35.9 0.0013 18.8 1.7 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668692|ref|NP_247491.1| - 1.1e-09 38.1 39.0 0.0046 17.4 3.1 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668692|ref|NP_247491.1| - 2.7e-09 37.4 25.7 0.00091 19.7 0.5 4.6 4 1 0 4 4 4 4 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|15668692|ref|NP_247491.1| - 3.4e-07 30.5 34.1 0.081 13.2 2.1 4.0 1 1 5 6 6 6 6 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668692|ref|NP_247491.1| - 7.9e-07 29.4 27.6 0.0032 17.8 0.2 4.1 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15668692|ref|NP_247491.1| - 1.9e-05 24.4 17.9 0.015 15.1 4.6 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668692|ref|NP_247491.1| - 2e-05 24.8 27.4 0.011 16.0 1.0 4.4 4 0 0 4 4 4 3 4Fe-4S single cluster domain FpoO PF10621.4 gi|15668692|ref|NP_247491.1| - 4.5 7.3 18.3 5.4 7.1 1.6 3.1 1 1 2 3 3 3 0 F420H2 dehydrogenase subunit FpoO Fer4 PF00037.22 gi|15668693|ref|NP_247492.1| - 3.7e-40 133.9 87.7 6.9e-07 28.6 3.9 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668693|ref|NP_247492.1| - 6.1e-30 103.3 65.0 3.9e-08 33.5 8.3 5.4 2 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668693|ref|NP_247492.1| - 3.9e-28 96.0 77.1 1.1e-05 25.1 1.7 8.4 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668693|ref|NP_247492.1| - 4.8e-28 96.7 70.2 7.4e-11 41.6 8.4 5.6 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668693|ref|NP_247492.1| - 5.5e-26 91.0 52.5 3e-08 34.3 5.0 6.5 6 0 0 6 6 6 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15668693|ref|NP_247492.1| - 1.1e-25 89.2 66.9 9.2e-09 35.0 6.2 5.2 4 1 1 5 5 5 5 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668693|ref|NP_247492.1| - 6.8e-25 87.0 67.9 1.6e-07 31.4 9.3 5.5 4 2 1 5 5 5 5 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668693|ref|NP_247492.1| - 5.5e-22 77.5 53.8 7.8e-07 29.0 2.0 5.7 3 2 3 6 6 6 6 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668693|ref|NP_247492.1| - 6e-21 73.0 78.6 0.00014 21.5 2.5 8.4 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668693|ref|NP_247492.1| - 1e-16 60.9 52.9 4.6e-06 26.8 1.8 7.2 3 2 2 7 7 7 7 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668693|ref|NP_247492.1| - 1.6e-13 50.8 76.1 0.0042 17.4 0.7 8.4 3 1 5 8 8 8 6 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668693|ref|NP_247492.1| - 6.7e-11 41.5 74.4 0.016 15.4 0.9 8.2 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15668693|ref|NP_247492.1| - 3.1e-05 24.4 68.8 0.064 13.8 0.9 8.1 5 3 2 7 7 7 5 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15668693|ref|NP_247492.1| - 0.0013 19.1 92.6 0.39 11.3 3.1 8.2 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_13 PF13370.1 gi|15668693|ref|NP_247492.1| - 0.01 16.2 68.8 0.31 11.4 1.1 8.5 6 2 2 8 8 8 0 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15668693|ref|NP_247492.1| - 0.17 11.7 45.7 0.15 11.9 4.2 4.9 1 1 4 5 5 4 0 4Fe-4S dicluster domain Complex1_49kDa PF00346.14 gi|15668694|ref|NP_247493.1| - 1.1e-30 106.5 0.3 2e-26 92.6 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|15668694|ref|NP_247493.1| - 2.6e-13 49.5 10.0 5.4e-13 48.5 1.4 2.8 2 2 1 3 3 3 2 Nickel-dependent hydrogenase Oxidored_q6 PF01058.17 gi|15668695|ref|NP_247494.1| - 1.3e-30 105.7 0.5 1.6e-30 105.4 0.4 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1959 PF09218.5 gi|15668696|ref|NP_247495.1| - 7.5e-58 193.3 2.4 9.6e-58 193.0 1.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1959) DUF2104 PF09877.4 gi|15668697|ref|NP_247496.1| - 4.9e-37 125.9 5.2 5.2e-37 125.8 3.6 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2104) DUF95 PF01944.12 gi|15668697|ref|NP_247496.1| - 0.063 12.9 3.3 0.076 12.6 2.3 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF95 YjgP_YjgQ PF03739.9 gi|15668697|ref|NP_247496.1| - 0.54 8.9 5.9 0.27 9.9 2.4 1.6 1 1 0 1 1 1 0 Predicted permease YjgP/YjgQ family Cation_efflux PF01545.16 gi|15668697|ref|NP_247496.1| - 0.6 9.1 4.1 1.5 7.7 0.2 2.0 2 0 0 2 2 2 0 Cation efflux family EpsG PF14897.1 gi|15668698|ref|NP_247497.1| - 0.18 10.6 14.9 0.21 10.4 10.3 1.0 1 0 0 1 1 1 0 EpsG family DUF4131 PF13567.1 gi|15668698|ref|NP_247497.1| - 1.1 8.6 3.7 2.2 7.6 2.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) YesK PF14150.1 gi|15668698|ref|NP_247497.1| - 1.5 8.9 11.7 0.68 10.0 2.9 2.1 2 0 0 2 2 2 0 YesK-like protein DPM3 PF08285.6 gi|15668698|ref|NP_247497.1| - 2.7 7.8 8.4 0.63 9.9 1.3 2.0 1 1 1 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF2244 PF10003.4 gi|15668698|ref|NP_247497.1| - 3.9 6.8 5.9 1.9 7.8 2.6 1.5 1 1 0 1 1 1 0 Integral membrane protein (DUF2244) NADHdh PF00146.16 gi|15668699|ref|NP_247498.1| - 1e-21 77.3 15.9 1.3e-21 76.9 11.0 1.1 1 0 0 1 1 1 1 NADH dehydrogenase CytB6-F_Fe-S PF08802.5 gi|15668700|ref|NP_247499.1| - 0.23 11.5 3.3 7 6.7 0.3 2.2 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit DUF912 PF06024.7 gi|15668700|ref|NP_247499.1| - 0.31 11.1 1.0 2 8.5 0.7 1.9 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) NADHdeh_related PF10125.4 gi|15668701|ref|NP_247500.1| - 6e-105 349.2 14.7 6.6e-105 349.0 10.2 1.0 1 0 0 1 1 1 1 NADH dehydrogenase I, subunit N related protein Halogen_Hydrol PF10112.4 gi|15668701|ref|NP_247500.1| - 1.7 7.9 5.3 2.3 7.5 0.1 2.2 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2105 PF09878.4 gi|15668702|ref|NP_247501.1| - 5.1e-93 310.4 12.7 6.1e-93 310.2 8.8 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) DUF2106 PF09879.4 gi|15668703|ref|NP_247502.1| - 2.8e-77 257.3 0.2 3.1e-77 257.1 0.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2106) DUF2107 PF09880.4 gi|15668704|ref|NP_247503.1| - 2.5e-18 65.7 3.1 2.8e-18 65.5 2.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2107) SNF PF00209.13 gi|15668704|ref|NP_247503.1| - 0.033 12.6 0.1 0.038 12.4 0.1 1.0 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family DUF2108 PF09881.4 gi|15668705|ref|NP_247504.1| - 3e-31 107.0 9.8 3.6e-31 106.8 6.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2108) DUF4040 PF13244.1 gi|15668705|ref|NP_247504.1| - 0.3 11.1 2.4 0.59 10.1 1.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4040) BCLP PF12304.3 gi|15668705|ref|NP_247504.1| - 0.37 10.1 4.0 0.43 9.9 2.8 1.3 1 1 0 1 1 1 0 Beta-casein like protein DUF2109 PF09882.4 gi|15668705|ref|NP_247504.1| - 1.2 9.0 5.1 1.2 9.1 2.5 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) SdpI PF13630.1 gi|15668705|ref|NP_247504.1| - 6 6.6 9.5 0.4 10.4 2.9 1.7 2 0 0 2 2 2 0 SdpI/YhfL protein family DUF2109 PF09882.4 gi|15668706|ref|NP_247505.1| - 1.8e-37 127.1 6.1 2e-37 126.9 4.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2109) DUF4131 PF13567.1 gi|15668706|ref|NP_247505.1| - 0.029 13.7 1.5 0.032 13.6 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1240 PF06836.7 gi|15668706|ref|NP_247505.1| - 0.11 12.6 2.3 0.19 12.0 1.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1240) DUF1614 PF07758.6 gi|15668706|ref|NP_247505.1| - 0.18 11.5 1.2 0.2 11.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) DUF4282 PF14110.1 gi|15668706|ref|NP_247505.1| - 2.1 8.5 5.6 5.9 7.1 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) FeoB_C PF07664.7 gi|15668708|ref|NP_247507.1| - 0.012 14.9 2.9 0.058 12.8 0.5 2.1 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus SDF PF00375.13 gi|15668708|ref|NP_247507.1| - 0.041 12.6 1.7 0.057 12.1 1.1 1.2 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family FtsX PF02687.16 gi|15668708|ref|NP_247507.1| - 0.19 11.4 7.4 4.8 6.9 2.8 2.1 1 1 1 2 2 2 0 FtsX-like permease family 7TMR-DISM_7TM PF07695.6 gi|15668708|ref|NP_247507.1| - 0.57 9.8 6.3 0.69 9.5 4.4 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling HTH_3 PF01381.17 gi|15668709|ref|NP_247508.1| - 3.2e-10 39.6 0.2 6.7e-10 38.6 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|15668709|ref|NP_247508.1| - 1.5e-09 37.7 0.2 5e-09 36.0 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|15668709|ref|NP_247508.1| - 2.2e-06 27.7 0.0 4.5e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|15668709|ref|NP_247508.1| - 5.4e-06 26.1 0.3 1.2e-05 25.0 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|15668709|ref|NP_247508.1| - 0.0028 17.2 0.2 0.024 14.2 0.0 2.5 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|15668709|ref|NP_247508.1| - 0.0065 16.6 0.2 0.018 15.2 0.1 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.11 gi|15668709|ref|NP_247508.1| - 1.4 8.2 3.8 5.6 6.3 0.0 3.0 3 0 0 3 3 3 0 Sigma-70, region 4 zf-ZPR1 PF03367.8 gi|15668710|ref|NP_247509.1| - 1.9e-54 183.1 0.0 2.5e-54 182.7 0.0 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Prim_Zn_Ribbon PF08273.7 gi|15668710|ref|NP_247509.1| - 0.00078 19.4 0.3 0.0015 18.5 0.2 1.5 1 1 0 1 1 1 1 Zinc-binding domain of primase-helicase Lar_restr_allev PF14354.1 gi|15668710|ref|NP_247509.1| - 0.027 14.7 0.1 0.058 13.7 0.1 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar TAFH PF07531.9 gi|15668710|ref|NP_247509.1| - 0.056 13.0 0.2 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 NHR1 homology to TAF DnaJ_CXXCXGXG PF00684.14 gi|15668710|ref|NP_247509.1| - 0.084 12.9 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 DnaJ central domain Takusan PF04822.8 gi|15668710|ref|NP_247509.1| - 2.4 7.9 9.0 0.33 10.7 1.0 2.6 3 0 0 3 3 3 0 Takusan Usp PF00582.21 gi|15668711|ref|NP_247510.1| - 2.7e-40 137.8 0.5 3.1e-40 137.6 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.19 gi|15668711|ref|NP_247510.1| - 0.0015 17.8 0.1 0.0023 17.2 0.1 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DXP_reductoisom PF02670.11 gi|15668711|ref|NP_247510.1| - 0.015 15.8 0.2 0.024 15.1 0.2 1.5 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase PTS_IIB PF02302.12 gi|15668711|ref|NP_247510.1| - 0.07 13.6 0.5 0.25 11.8 0.1 1.9 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit FAD_binding_3 PF01494.14 gi|15668712|ref|NP_247511.1| - 5.5e-14 51.9 0.2 8.1e-08 31.6 0.0 2.5 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|15668712|ref|NP_247511.1| - 1.2e-10 41.1 2.9 7e-10 38.5 2.0 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|15668712|ref|NP_247511.1| - 2e-10 39.8 0.1 1.1e-06 27.5 0.0 2.1 1 1 1 2 2 2 2 Tryptophan halogenase DAO PF01266.19 gi|15668712|ref|NP_247511.1| - 4.3e-09 35.7 0.6 0.0018 17.2 0.0 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|15668712|ref|NP_247511.1| - 2.8e-07 29.7 0.0 2.3e-06 26.8 0.0 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein HI0933_like PF03486.9 gi|15668712|ref|NP_247511.1| - 6.6e-07 28.1 0.6 1.3e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.17 gi|15668712|ref|NP_247511.1| - 8e-07 28.2 0.0 8e-07 28.2 0.0 2.2 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|15668712|ref|NP_247511.1| - 1.6e-06 27.2 1.2 6.6e-06 25.2 0.3 2.1 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 gi|15668712|ref|NP_247511.1| - 2.9e-06 26.5 0.5 2.2e-05 23.6 0.0 2.4 3 0 0 3 3 3 1 Thi4 family Pyr_redox_2 PF07992.9 gi|15668712|ref|NP_247511.1| - 2.4e-05 24.2 3.7 4.8e-05 23.3 2.5 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|15668712|ref|NP_247511.1| - 0.00019 21.3 0.0 0.00046 20.1 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.1 gi|15668712|ref|NP_247511.1| - 0.00047 20.2 0.0 0.0008 19.5 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.5 gi|15668712|ref|NP_247511.1| - 0.012 14.5 0.0 0.02 13.7 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase Pyr_redox PF00070.22 gi|15668712|ref|NP_247511.1| - 0.03 14.7 0.2 1.1 9.7 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase H-K_ATPase_N PF09040.6 gi|15668712|ref|NP_247511.1| - 0.15 12.2 1.9 0.44 10.7 0.2 2.4 2 0 0 2 2 2 0 Gastric H+/K+-ATPase, N terminal domain 3HCDH_N PF02737.13 gi|15668712|ref|NP_247511.1| - 0.43 10.1 2.3 2.1 7.9 0.0 2.7 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4 PF00037.22 gi|15668713|ref|NP_247512.1| - 3.1e-13 48.7 15.1 2.2e-07 30.1 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668713|ref|NP_247512.1| - 8.9e-11 41.4 25.3 1.2e-07 31.4 9.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668713|ref|NP_247512.1| - 2.4e-10 39.8 12.2 2.8e-06 26.9 1.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668713|ref|NP_247512.1| - 4.8e-10 38.7 13.4 1.5e-06 27.7 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668713|ref|NP_247512.1| - 6.9e-09 35.9 9.1 8.9e-09 35.6 6.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668713|ref|NP_247512.1| - 8.5e-08 31.9 11.8 1.2e-07 31.4 8.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668713|ref|NP_247512.1| - 9.7e-07 28.9 9.9 0.0047 17.1 0.7 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668713|ref|NP_247512.1| - 2.6e-06 28.0 9.6 0.0099 16.6 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15668713|ref|NP_247512.1| - 1.8e-05 24.6 13.5 0.00048 20.2 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668713|ref|NP_247512.1| - 5.7e-05 23.0 11.0 0.00076 19.4 7.7 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668713|ref|NP_247512.1| - 0.00018 22.0 8.6 0.067 13.7 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15668713|ref|NP_247512.1| - 0.00058 19.7 5.5 0.00065 19.5 3.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668713|ref|NP_247512.1| - 0.006 16.9 12.8 0.1 12.9 2.1 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668713|ref|NP_247512.1| - 0.0097 16.2 10.0 0.19 12.1 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain zf-ribbon_3 PF13248.1 gi|15668713|ref|NP_247512.1| - 0.014 14.6 5.2 0.34 10.1 0.1 2.6 3 0 0 3 3 3 0 zinc-ribbon domain Fer4_3 PF12798.2 gi|15668713|ref|NP_247512.1| - 0.099 13.2 3.8 0.099 13.2 2.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain zf-piccolo PF05715.8 gi|15668713|ref|NP_247512.1| - 0.8 9.7 6.7 0.35 10.9 3.2 1.5 1 1 0 1 1 1 0 Piccolo Zn-finger Fer4_18 PF13746.1 gi|15668713|ref|NP_247512.1| - 1.3 9.5 16.3 0.65 10.4 2.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain MSSP PF03940.8 gi|15668713|ref|NP_247512.1| - 2.1 7.8 9.5 0.24 10.7 1.5 2.0 2 0 0 2 2 2 0 Male specific sperm protein zf-CXXC PF02008.15 gi|15668713|ref|NP_247512.1| - 7.1 6.5 12.3 8.5 6.2 1.3 2.2 2 0 0 2 2 2 0 CXXC zinc finger domain Lactamase_B PF00753.22 gi|15668714|ref|NP_247513.1| - 5.6e-13 48.9 0.0 1.2e-12 47.8 0.0 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|15668714|ref|NP_247513.1| - 3e-12 46.7 0.0 4.6e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|15668714|ref|NP_247513.1| - 0.00041 20.3 0.0 0.00069 19.6 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain YmzC PF14157.1 gi|15668714|ref|NP_247513.1| - 0.03 14.1 0.6 0.066 13.0 0.4 1.5 1 0 0 1 1 1 0 YmzC-like protein UBA_3 PF09288.5 gi|15668714|ref|NP_247513.1| - 0.035 13.6 0.0 0.11 12.1 0.0 1.8 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain Peripla_BP_6 PF13458.1 gi|15668714|ref|NP_247513.1| - 0.17 11.2 0.0 7.9 5.7 0.0 2.0 1 1 1 2 2 2 0 Periplasmic binding protein Hist_deacetyl PF00850.14 gi|15668715|ref|NP_247514.1| - 3e-70 236.9 0.0 4e-70 236.5 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain POR PF01558.13 gi|15668716|ref|NP_247515.1| - 7.5e-39 133.3 0.0 8.9e-39 133.1 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|15668717|ref|NP_247516.1| - 5.2e-38 130.0 0.2 7.6e-38 129.4 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WYL PF13280.1 gi|15668718|ref|NP_247517.1| - 0.0042 16.9 0.0 0.0085 15.9 0.0 1.5 1 0 0 1 1 1 1 WYL domain tRNA-synt_1f PF01921.13 gi|15668719|ref|NP_247518.1| - 1.5e-140 467.9 0.2 2.1e-140 467.4 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|15668719|ref|NP_247518.1| - 5.3e-05 22.0 0.1 0.018 13.7 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|15668719|ref|NP_247518.1| - 0.0017 17.5 0.5 1.9 7.5 0.0 2.8 4 0 0 4 4 4 2 tRNA synthetases class I (C) catalytic domain eIF-5_eIF-2B PF01873.12 gi|15668719|ref|NP_247518.1| - 0.011 15.4 1.0 0.11 12.1 0.1 2.3 2 0 0 2 2 2 0 Domain found in IF2B/IF5 Zn_Tnp_IS1595 PF12760.2 gi|15668719|ref|NP_247518.1| - 0.021 14.5 0.6 0.049 13.4 0.4 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_L7Ae PF01248.21 gi|15668719|ref|NP_247518.1| - 0.12 11.9 1.5 7.6 6.1 0.0 3.2 3 0 0 3 3 3 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DUF2097 PF09870.4 gi|15668720|ref|NP_247519.1| - 2.6e-23 81.9 8.3 3e-23 81.7 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2097) tRNA_anti-codon PF01336.20 gi|15668720|ref|NP_247519.1| - 0.045 13.6 0.2 0.19 11.5 0.1 1.9 1 1 0 1 1 1 0 OB-fold nucleic acid binding domain SAM_2 PF07647.12 gi|15668720|ref|NP_247519.1| - 0.063 13.1 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF3791 PF12668.2 gi|15668720|ref|NP_247519.1| - 0.18 11.4 3.0 8.7 6.0 0.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3791) CTP_transf_2 PF01467.21 gi|15668721|ref|NP_247520.1| - 1.6e-19 70.5 0.0 2.3e-19 69.9 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase HIGH_NTase1 PF05636.6 gi|15668721|ref|NP_247520.1| - 0.0019 17.3 0.0 0.41 9.6 0.0 2.1 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.6 gi|15668721|ref|NP_247520.1| - 0.093 12.1 0.0 0.64 9.4 0.0 2.2 2 1 0 2 2 2 0 Citrate lyase ligase C-terminal domain PPDK_N PF01326.14 gi|15668722|ref|NP_247521.1| - 5.2e-115 383.9 0.2 1.1e-114 382.9 0.0 1.5 2 0 0 2 2 2 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|15668722|ref|NP_247521.1| - 5.5e-88 294.6 0.4 1.3e-87 293.4 0.3 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|15668722|ref|NP_247521.1| - 2.2e-26 91.2 0.4 2.3e-12 46.3 0.0 2.8 2 0 0 2 2 2 2 PEP-utilising enzyme, mobile domain LAGLIDADG_3 PF14528.1 gi|15668722|ref|NP_247521.1| - 1.2e-06 28.6 8.6 0.0039 17.3 0.1 4.4 3 1 0 4 4 4 2 LAGLIDADG-like domain PEP-utilisers_N PF05524.8 gi|15668722|ref|NP_247521.1| - 0.029 14.1 2.0 1.4 8.7 0.0 3.1 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal Ribosomal_L16 PF00252.13 gi|15668723|ref|NP_247522.1| - 2.6e-37 127.5 0.2 3e-37 127.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Glycos_transf_2 PF00535.21 gi|15668724|ref|NP_247523.1| - 4.8e-30 104.4 0.7 6.9e-30 103.9 0.5 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|15668724|ref|NP_247523.1| - 1.1e-07 31.9 0.0 2.9e-07 30.5 0.0 1.7 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|15668724|ref|NP_247523.1| - 2.3e-05 24.6 0.0 4.5e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 NTP_transferase PF00483.18 gi|15668724|ref|NP_247523.1| - 0.0017 17.6 0.1 0.0028 16.9 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase CLN5 PF15014.1 gi|15668724|ref|NP_247523.1| - 0.012 15.0 1.5 0.017 14.4 1.0 1.3 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 5 Tautomerase_3 PF14832.1 gi|15668725|ref|NP_247524.1| - 0.07 13.1 0.8 0.2 11.6 0.6 1.7 1 1 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme ApoL PF05461.6 gi|15668725|ref|NP_247524.1| - 0.078 12.2 0.9 0.097 11.9 0.6 1.1 1 0 0 1 1 1 0 Apolipoprotein L ABC2_membrane_3 PF12698.2 gi|15668725|ref|NP_247524.1| - 1.7 7.6 21.6 4.3 6.2 15.0 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein Aconitase_C PF00694.14 gi|15668725|ref|NP_247524.1| - 2.3 8.3 7.9 1.2 9.2 3.8 1.7 2 0 0 2 2 2 0 Aconitase C-terminal domain DUF2547 PF10818.3 gi|15668725|ref|NP_247524.1| - 3.3 8.3 5.7 1.2 9.8 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2547) DUF4064 PF13273.1 gi|15668725|ref|NP_247524.1| - 7.5 6.7 8.7 2.4 8.3 3.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF948 PF06103.6 gi|15668726|ref|NP_247525.1| - 0.02 14.7 1.4 0.023 14.5 1.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Ninjurin PF04923.7 gi|15668726|ref|NP_247525.1| - 0.04 13.6 0.8 0.041 13.6 0.5 1.1 1 0 0 1 1 1 0 Ninjurin Atg14 PF10186.4 gi|15668726|ref|NP_247525.1| - 0.046 12.6 1.1 0.048 12.6 0.8 1.0 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 7TM_GPCR_Srx PF10328.4 gi|15668726|ref|NP_247525.1| - 0.062 12.3 0.6 0.059 12.4 0.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx RHH_1 PF01402.16 gi|15668726|ref|NP_247525.1| - 0.096 12.6 1.7 0.12 12.3 0.4 1.7 1 1 1 2 2 2 0 Ribbon-helix-helix protein, copG family cwf21 PF08312.7 gi|15668726|ref|NP_247525.1| - 0.13 12.1 3.1 0.16 11.8 2.2 1.1 1 0 0 1 1 1 0 cwf21 domain DUF3782 PF12644.2 gi|15668726|ref|NP_247525.1| - 0.15 11.8 2.6 0.19 11.5 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) DUF4446 PF14584.1 gi|15668726|ref|NP_247525.1| - 0.16 11.7 1.8 0.21 11.3 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Lge1 PF11488.3 gi|15668726|ref|NP_247525.1| - 0.2 11.8 1.3 0.23 11.6 0.9 1.1 1 0 0 1 1 1 0 Transcriptional regulatory protein LGE1 DUF904 PF06005.7 gi|15668726|ref|NP_247525.1| - 0.79 10.0 5.7 1 9.7 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF904) Vpu PF00558.14 gi|15668726|ref|NP_247525.1| - 0.82 9.2 4.8 1.1 8.8 3.3 1.2 1 0 0 1 1 1 0 Vpu protein DivIC PF04977.10 gi|15668726|ref|NP_247525.1| - 0.94 9.0 4.9 1.1 8.8 3.4 1.3 1 1 0 1 1 1 0 Septum formation initiator CbiA PF01656.18 gi|15668727|ref|NP_247526.1| - 5.2e-41 140.2 3.0 6.9e-41 139.7 2.1 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15668727|ref|NP_247526.1| - 1.9e-15 57.1 0.0 2.8e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|15668727|ref|NP_247526.1| - 3.1e-12 46.2 2.7 4.4e-06 26.0 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.6 gi|15668727|ref|NP_247526.1| - 5.5e-11 42.0 0.3 2.5e-10 39.8 0.2 1.9 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|15668727|ref|NP_247526.1| - 4.7e-09 35.7 3.4 1.1e-07 31.2 0.3 2.3 2 0 0 2 2 2 1 Anion-transporting ATPase ParA PF10609.4 gi|15668727|ref|NP_247526.1| - 5.6e-09 35.7 1.4 1e-08 34.8 0.4 1.9 1 1 1 2 2 2 1 ParA/MinD ATPase like AAA_26 PF13500.1 gi|15668727|ref|NP_247526.1| - 8.5e-09 35.3 5.2 2.3e-07 30.6 0.4 2.3 2 0 0 2 2 2 2 AAA domain YhjQ PF06564.7 gi|15668727|ref|NP_247526.1| - 2.8e-07 30.1 0.0 7.2e-07 28.8 0.0 1.7 1 1 0 1 1 1 1 YhjQ protein VirC1 PF07015.6 gi|15668727|ref|NP_247526.1| - 0.00097 18.2 0.8 0.0018 17.4 0.5 1.4 1 0 0 1 1 1 1 VirC1 protein AAA_19 PF13245.1 gi|15668727|ref|NP_247526.1| - 0.0019 17.8 1.7 0.026 14.2 0.1 2.8 3 0 0 3 3 3 1 Part of AAA domain APS_kinase PF01583.15 gi|15668727|ref|NP_247526.1| - 0.0029 17.2 0.0 0.0041 16.7 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase PhoH PF02562.11 gi|15668727|ref|NP_247526.1| - 0.0036 16.5 1.8 0.17 11.0 1.1 2.2 2 0 0 2 2 2 1 PhoH-like protein SRP54 PF00448.17 gi|15668727|ref|NP_247526.1| - 0.0044 16.4 2.0 0.011 15.1 1.4 1.9 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_25 PF13481.1 gi|15668727|ref|NP_247526.1| - 0.0065 15.8 2.4 0.019 14.3 1.6 1.8 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15668727|ref|NP_247526.1| - 0.013 16.3 0.7 0.057 14.2 0.5 1.9 1 1 1 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|15668727|ref|NP_247526.1| - 0.02 14.4 0.2 0.078 12.5 0.3 1.8 2 0 0 2 2 2 0 AAA domain ResIII PF04851.10 gi|15668727|ref|NP_247526.1| - 0.035 13.9 0.3 2.9 7.6 0.2 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit NanE PF04131.9 gi|15668727|ref|NP_247526.1| - 0.044 12.7 1.6 6.7 5.6 0.4 2.9 1 1 2 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase MobB PF03205.9 gi|15668727|ref|NP_247526.1| - 0.063 12.9 0.4 0.21 11.3 0.1 1.9 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|15668727|ref|NP_247526.1| - 0.19 12.0 1.0 0.51 10.6 0.7 1.7 1 1 0 1 1 1 0 AAA domain DUF2121 PF09894.4 gi|15668728|ref|NP_247527.1| - 6.4e-77 257.2 7.7 1.1e-76 256.5 5.3 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) DUF4264 PF14084.1 gi|15668728|ref|NP_247527.1| - 0.014 14.7 1.6 18 4.8 0.2 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF4264) PUA PF01472.15 gi|15668728|ref|NP_247527.1| - 0.016 14.9 0.5 0.064 12.9 0.4 1.9 2 0 0 2 2 2 0 PUA domain ENTH PF01417.15 gi|15668728|ref|NP_247527.1| - 0.058 13.2 0.4 0.058 13.2 0.3 1.6 2 0 0 2 2 2 0 ENTH domain NikR_C PF08753.6 gi|15668729|ref|NP_247528.1| - 1.5e-32 111.2 3.2 2.4e-32 110.6 2.2 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|15668729|ref|NP_247528.1| - 5.1e-11 41.9 0.9 5.1e-11 41.9 0.6 2.1 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family RRM_3 PF08777.6 gi|15668729|ref|NP_247528.1| - 0.13 12.1 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif Radical_SAM PF04055.16 gi|15668730|ref|NP_247529.1| - 9.6e-12 45.3 0.8 2.2e-10 40.9 0.1 2.4 2 0 0 2 2 2 1 Radical SAM superfamily His_biosynth PF00977.16 gi|15668730|ref|NP_247529.1| - 0.0029 16.9 0.0 0.16 11.2 0.1 2.3 2 0 0 2 2 2 2 Histidine biosynthesis protein DUF3223 PF11523.3 gi|15668730|ref|NP_247529.1| - 0.068 13.4 1.5 12 6.2 0.1 3.5 3 1 0 3 3 3 0 Protein of unknown function (DUF3223) NIR_SIR PF01077.17 gi|15668731|ref|NP_247530.1| - 1.1e-27 96.3 1.0 1.5e-27 95.8 0.7 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|15668731|ref|NP_247530.1| - 2.8e-15 55.6 0.0 1e-14 53.8 0.0 1.9 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.22 gi|15668731|ref|NP_247530.1| - 0.00034 20.0 3.4 0.00034 20.0 2.4 2.9 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668731|ref|NP_247530.1| - 0.0058 16.4 10.9 0.0058 16.4 7.6 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668731|ref|NP_247530.1| - 0.011 15.5 8.0 0.011 15.5 5.6 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668731|ref|NP_247530.1| - 0.046 13.5 3.3 0.046 13.5 2.3 3.4 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668731|ref|NP_247530.1| - 0.19 12.1 12.5 0.33 11.3 7.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15668731|ref|NP_247530.1| - 1.6 8.8 13.7 15 5.7 0.1 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668731|ref|NP_247530.1| - 2.3 8.7 19.6 0.11 12.8 2.5 3.4 3 1 0 3 3 3 0 4Fe-4S binding domain CbiJ PF02571.9 gi|15668732|ref|NP_247531.1| - 3.3e-68 229.7 0.0 3.7e-68 229.5 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK AP_endonuc_2 PF01261.19 gi|15668732|ref|NP_247531.1| - 0.004 16.4 0.1 0.0082 15.4 0.0 1.5 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel HGD-D PF06050.8 gi|15668732|ref|NP_247531.1| - 0.0096 14.7 0.3 0.031 13.0 0.0 1.8 2 1 0 2 2 2 1 2-hydroxyglutaryl-CoA dehydratase, D-component MGDG_synth PF06925.6 gi|15668732|ref|NP_247531.1| - 0.042 13.7 0.5 6.8 6.5 0.0 2.4 2 1 0 2 2 2 0 Monogalactosyldiacylglycerol (MGDG) synthase DapB_N PF01113.15 gi|15668732|ref|NP_247531.1| - 0.091 12.6 0.1 0.36 10.7 0.0 2.0 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Beta-Casp PF10996.3 gi|15668732|ref|NP_247531.1| - 0.11 12.4 0.1 5.6 6.9 0.0 2.3 2 0 0 2 2 2 0 Beta-Casp domain Acylphosphatase PF00708.13 gi|15668733|ref|NP_247532.1| - 3.1e-17 62.4 0.2 5.7e-17 61.6 0.0 1.5 2 0 0 2 2 2 1 Acylphosphatase PmbA_TldD PF01523.11 gi|15668733|ref|NP_247532.1| - 0.053 12.8 0.0 0.057 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative modulator of DNA gyrase SMC_Nse1 PF07574.8 gi|15668733|ref|NP_247532.1| - 0.59 9.7 4.9 5.5 6.5 0.5 2.1 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex DUF416 PF04222.7 gi|15668733|ref|NP_247532.1| - 0.64 9.1 4.0 0.89 8.6 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF416) Soyouz_module PF14313.1 gi|15668733|ref|NP_247532.1| - 1 8.9 3.0 1.1 8.8 0.0 2.4 3 0 0 3 3 3 0 N-terminal region of Paramyxovirinae phosphoprotein (P) HCV_NS2 PF01538.13 gi|15668734|ref|NP_247533.1| - 0.13 11.7 2.6 0.16 11.3 1.8 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Mem_trans PF03547.13 gi|15668734|ref|NP_247533.1| - 0.2 9.8 7.3 0.2 9.9 4.5 1.3 1 1 0 1 1 1 0 Membrane transport protein BCHF PF07284.6 gi|15668734|ref|NP_247533.1| - 0.24 11.2 10.6 0.25 11.2 6.7 1.5 1 1 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) DUF4131 PF13567.1 gi|15668734|ref|NP_247533.1| - 0.71 9.2 8.1 4.8 6.5 5.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) L_HGMIC_fpl PF10242.4 gi|15668734|ref|NP_247533.1| - 3.6 7.5 10.5 0.26 11.2 2.0 2.1 1 1 1 2 2 2 0 Lipoma HMGIC fusion partner-like protein UbiA PF01040.13 gi|15668734|ref|NP_247533.1| - 4.9 6.2 12.5 2 7.5 1.0 2.1 2 0 0 2 2 2 0 UbiA prenyltransferase family Peptidase_M42 PF05343.9 gi|15668735|ref|NP_247534.1| - 1.6e-111 371.7 3.9 1.8e-111 371.5 2.7 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.23 gi|15668735|ref|NP_247534.1| - 1.3e-11 44.3 0.0 2.1e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|15668735|ref|NP_247534.1| - 3.4e-06 26.9 0.0 2.4e-05 24.1 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.10 gi|15668735|ref|NP_247534.1| - 0.011 14.3 0.1 0.12 10.8 0.0 2.3 2 1 1 3 3 3 0 Aminopeptidase I zinc metalloprotease (M18) CBS PF00571.23 gi|15668736|ref|NP_247535.1| - 4e-24 84.1 1.5 2.5e-13 49.5 0.4 2.4 3 0 0 3 3 3 2 CBS domain Phage_Cox PF10743.4 gi|15668736|ref|NP_247535.1| - 0.062 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Regulatory phage protein cox EMG1 PF03587.9 gi|15668737|ref|NP_247536.1| - 6.6e-47 159.4 0.6 7.8e-47 159.1 0.4 1.1 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase HTH_24 PF13412.1 gi|15668738|ref|NP_247537.1| - 5.2e-13 48.1 0.1 1e-12 47.2 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|15668738|ref|NP_247537.1| - 2.3e-09 36.7 0.0 4e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|15668738|ref|NP_247537.1| - 1.4e-07 31.0 0.0 2.8e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|15668738|ref|NP_247537.1| - 2.9e-06 26.9 0.1 7.2e-06 25.7 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.7 gi|15668738|ref|NP_247537.1| - 8e-06 25.4 0.1 1.7e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.15 gi|15668738|ref|NP_247537.1| - 2.1e-05 24.0 0.1 7.1e-05 22.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|15668738|ref|NP_247537.1| - 3.4e-05 24.0 0.0 6.3e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|15668738|ref|NP_247537.1| - 9.3e-05 22.0 0.6 0.00023 20.8 0.1 1.9 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.1 gi|15668738|ref|NP_247537.1| - 9.5e-05 22.0 0.0 0.00033 20.2 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4423) HTH_Crp_2 PF13545.1 gi|15668738|ref|NP_247537.1| - 0.00013 21.7 1.1 0.0002 21.1 0.0 1.8 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.2 gi|15668738|ref|NP_247537.1| - 0.0002 21.0 0.0 0.00035 20.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|15668738|ref|NP_247537.1| - 0.00032 20.5 0.0 0.00079 19.3 0.0 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.1 gi|15668738|ref|NP_247537.1| - 0.00034 20.5 0.1 0.0015 18.5 0.0 2.2 2 1 0 2 2 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|15668738|ref|NP_247537.1| - 0.00035 20.6 0.2 0.0014 18.6 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_10 PF04967.7 gi|15668738|ref|NP_247537.1| - 0.0011 18.4 0.0 0.0024 17.4 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_3 PF01381.17 gi|15668738|ref|NP_247537.1| - 0.0033 17.2 0.0 0.0079 16.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_36 PF13730.1 gi|15668738|ref|NP_247537.1| - 0.0034 17.4 0.0 0.01 15.9 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|15668738|ref|NP_247537.1| - 0.0056 16.2 0.0 0.0088 15.6 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.16 gi|15668738|ref|NP_247537.1| - 0.007 15.7 0.1 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Mga PF08280.6 gi|15668738|ref|NP_247537.1| - 0.0071 16.0 0.1 0.07 12.9 0.0 2.2 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_12 PF08461.5 gi|15668738|ref|NP_247537.1| - 0.0095 15.6 0.2 0.02 14.6 0.1 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_40 PF14493.1 gi|15668738|ref|NP_247537.1| - 0.017 15.3 0.1 0.042 14.0 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Topoisom_bac PF01131.15 gi|15668738|ref|NP_247537.1| - 0.017 13.9 0.1 0.024 13.4 0.1 1.2 1 0 0 1 1 1 0 DNA topoisomerase GerE PF00196.14 gi|15668738|ref|NP_247537.1| - 0.024 13.9 0.1 0.061 12.6 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Mrr_N PF14338.1 gi|15668738|ref|NP_247537.1| - 0.027 14.5 0.1 0.091 12.8 0.1 2.0 1 1 0 1 1 1 0 Mrr N-terminal domain DUF387 PF04079.11 gi|15668738|ref|NP_247537.1| - 0.038 13.3 0.4 0.075 12.3 0.1 1.7 2 0 0 2 2 1 0 Putative transcriptional regulators (Ypuh-like) LexA_DNA_bind PF01726.11 gi|15668738|ref|NP_247537.1| - 0.042 13.4 0.0 0.13 11.8 0.0 1.8 1 0 0 1 1 1 0 LexA DNA binding domain Sigma70_r4_2 PF08281.7 gi|15668738|ref|NP_247537.1| - 0.045 13.2 0.1 0.085 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 RepL PF05732.6 gi|15668738|ref|NP_247537.1| - 0.051 12.7 0.1 0.11 11.6 0.0 1.6 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HU-DNA_bdg PF14848.1 gi|15668738|ref|NP_247537.1| - 0.055 13.1 0.4 0.13 11.9 0.2 1.7 1 1 0 1 1 1 0 DNA-binding domain EAP30 PF04157.11 gi|15668738|ref|NP_247537.1| - 0.066 12.3 0.0 0.12 11.5 0.0 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_AsnC-type PF13404.1 gi|15668738|ref|NP_247537.1| - 0.078 12.5 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain KorB PF08535.5 gi|15668738|ref|NP_247537.1| - 0.094 12.8 0.0 0.29 11.2 0.0 1.9 1 1 0 1 1 1 0 KorB domain Sigma70_r4 PF04545.11 gi|15668738|ref|NP_247537.1| - 0.29 10.4 1.2 0.37 10.1 0.1 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 SurE PF01975.12 gi|15668739|ref|NP_247538.1| - 3.4e-58 196.2 0.0 4.1e-58 195.9 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE CheR PF01739.13 gi|15668740|ref|NP_247539.1| - 0.00066 19.0 0.0 0.00083 18.6 0.0 1.2 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Adenylsucc_synt PF00709.16 gi|15668741|ref|NP_247540.1| - 7.3e-95 318.0 5.0 6.8e-46 156.7 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase YARHG PF13308.1 gi|15668742|ref|NP_247541.1| - 0.0072 15.8 3.0 0.22 11.0 0.4 2.1 1 1 1 2 2 2 2 YARHG domain Pox_L5 PF04872.8 gi|15668742|ref|NP_247541.1| - 0.063 12.9 0.4 0.088 12.4 0.2 1.3 1 1 0 1 1 1 0 Poxvirus L5 protein family DNA_methylase PF00145.12 gi|15668743|ref|NP_247542.1| - 9.1e-48 163.0 1.0 4e-31 108.3 0.9 2.0 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.5 gi|15668743|ref|NP_247542.1| - 0.003 17.1 0.3 0.011 15.3 0.0 2.0 2 2 1 3 3 3 1 RNA cap guanine-N2 methyltransferase DUF99 PF01949.11 gi|15668743|ref|NP_247542.1| - 0.045 12.8 0.3 0.22 10.6 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF99 SPT16 PF08644.6 gi|15668743|ref|NP_247542.1| - 0.062 13.1 2.0 0.13 12.0 1.2 1.6 1 1 1 2 2 2 0 FACT complex subunit (SPT16/CDC68) NCD1 PF04904.8 gi|15668743|ref|NP_247542.1| - 0.13 12.0 0.0 0.34 10.6 0.0 1.7 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) tRNA-synt_2c PF01411.14 gi|15668744|ref|NP_247543.1| - 4.6e-161 536.8 1.1 4.6e-161 536.8 0.8 1.4 2 0 0 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|15668744|ref|NP_247543.1| - 6.2e-12 45.2 1.4 2.1e-11 43.4 1.0 2.0 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|15668744|ref|NP_247543.1| - 0.00043 19.9 0.5 0.0015 18.1 0.1 2.2 2 0 0 2 2 2 1 DHHA1 domain DUF2680 PF10925.3 gi|15668744|ref|NP_247543.1| - 1.8 8.4 6.9 0.99 9.3 0.5 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) DUF939 PF06081.6 gi|15668745|ref|NP_247544.1| - 0.45 10.3 8.0 0.036 13.9 1.1 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF939) FeoB_N PF02421.13 gi|15668746|ref|NP_247545.1| - 9.9e-69 229.5 1.0 1.6e-68 228.9 0.7 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|15668746|ref|NP_247545.1| - 2.3e-52 175.4 13.8 7.5e-34 115.9 2.5 2.7 2 0 0 2 2 2 2 Nucleoside recognition MMR_HSR1 PF01926.18 gi|15668746|ref|NP_247545.1| - 7e-19 67.9 0.1 2.1e-18 66.3 0.1 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.7 gi|15668746|ref|NP_247545.1| - 9e-19 66.6 2.2 9e-19 66.6 1.5 2.8 3 0 0 3 3 2 1 Ferrous iron transport protein B C terminus GTP_EFTU PF00009.22 gi|15668746|ref|NP_247545.1| - 9.5e-07 28.4 0.2 4.4e-05 23.0 0.1 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.11 gi|15668746|ref|NP_247545.1| - 1.4e-05 24.3 0.0 2.7e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.5 gi|15668746|ref|NP_247545.1| - 3.7e-05 23.0 0.0 8.5e-05 21.8 0.0 1.6 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Dynamin_N PF00350.18 gi|15668746|ref|NP_247545.1| - 0.00053 19.8 0.1 0.1 12.4 0.0 2.6 2 0 0 2 2 2 1 Dynamin family Arf PF00025.16 gi|15668746|ref|NP_247545.1| - 0.0045 16.2 0.1 0.0089 15.2 0.1 1.5 1 0 0 1 1 1 1 ADP-ribosylation factor family Miro PF08477.8 gi|15668746|ref|NP_247545.1| - 0.021 15.3 0.0 0.042 14.3 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein DUF258 PF03193.11 gi|15668746|ref|NP_247545.1| - 0.15 11.2 0.2 0.92 8.6 0.0 2.4 3 1 0 3 3 3 0 Protein of unknown function, DUF258 DUF3844 PF12955.2 gi|15668746|ref|NP_247545.1| - 0.21 11.7 0.0 0.66 10.1 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) AAA_18 PF13238.1 gi|15668746|ref|NP_247545.1| - 0.23 11.7 4.5 0.88 9.8 0.0 2.9 2 1 1 3 3 3 0 AAA domain FeoA PF04023.9 gi|15668747|ref|NP_247546.1| - 1.5e-17 63.2 0.1 1.7e-17 63.1 0.1 1.0 1 0 0 1 1 1 1 FeoA domain Fe_dep_repr_C PF02742.10 gi|15668748|ref|NP_247547.1| - 1.3e-18 66.4 2.0 2.8e-18 65.3 0.9 1.9 3 0 0 3 3 3 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|15668748|ref|NP_247547.1| - 1.9e-18 66.1 0.0 5.2e-18 64.7 0.0 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.17 gi|15668748|ref|NP_247547.1| - 2.1e-07 30.5 0.0 1.9e-06 27.4 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|15668748|ref|NP_247547.1| - 1.2e-06 28.7 0.0 2.9e-06 27.5 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|15668748|ref|NP_247547.1| - 5.8e-06 25.5 0.1 1.2e-05 24.6 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|15668748|ref|NP_247547.1| - 1.2e-05 24.8 0.0 2.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|15668748|ref|NP_247547.1| - 8.1e-05 22.1 0.0 0.00014 21.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|15668748|ref|NP_247547.1| - 0.00013 21.3 0.0 0.00022 20.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.15 gi|15668748|ref|NP_247547.1| - 0.0012 18.9 0.0 0.0025 17.8 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.7 gi|15668748|ref|NP_247547.1| - 0.0018 17.8 0.0 0.0033 17.0 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_12 PF08461.5 gi|15668748|ref|NP_247547.1| - 0.0052 16.4 0.1 0.015 15.0 0.1 1.8 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain B-block_TFIIIC PF04182.7 gi|15668748|ref|NP_247547.1| - 0.0061 16.3 0.0 0.0085 15.9 0.0 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_Crp_2 PF13545.1 gi|15668748|ref|NP_247547.1| - 0.014 15.1 0.0 0.038 13.7 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain TrmB PF01978.14 gi|15668748|ref|NP_247547.1| - 0.021 14.5 0.1 0.042 13.5 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB FeoC PF09012.5 gi|15668748|ref|NP_247547.1| - 0.027 14.1 0.0 0.06 13.0 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_17 PF12728.2 gi|15668748|ref|NP_247547.1| - 0.028 14.6 0.1 0.45 10.7 0.0 2.8 4 0 0 4 4 4 0 Helix-turn-helix domain HTH_37 PF13744.1 gi|15668748|ref|NP_247547.1| - 0.042 13.6 0.0 0.084 12.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.15 gi|15668748|ref|NP_247547.1| - 0.049 13.3 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|15668748|ref|NP_247547.1| - 0.065 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|15668748|ref|NP_247547.1| - 0.086 12.4 0.0 0.18 11.3 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_34 PF13601.1 gi|15668748|ref|NP_247547.1| - 0.11 12.5 0.1 0.46 10.5 0.1 2.0 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_10 PF04967.7 gi|15668748|ref|NP_247547.1| - 0.12 11.9 0.0 0.31 10.6 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain Porphobil_deam PF01379.15 gi|15668749|ref|NP_247548.1| - 1.2e-77 259.6 0.2 1.9e-77 259.0 0.1 1.3 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|15668749|ref|NP_247548.1| - 7.2e-19 67.6 0.2 1.6e-18 66.5 0.2 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain YhfZ_C PF14503.1 gi|15668749|ref|NP_247548.1| - 0.026 13.8 0.0 0.05 12.9 0.0 1.4 1 0 0 1 1 1 0 YhfZ C-terminal domain ATP_bind_4 PF01902.12 gi|15668750|ref|NP_247549.1| - 8.4e-105 348.9 4.2 9.4e-105 348.8 2.9 1.0 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|15668750|ref|NP_247549.1| - 0.0046 16.2 0.0 0.012 14.8 0.0 1.8 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15668750|ref|NP_247549.1| - 0.03 12.8 0.0 0.049 12.1 0.0 1.4 1 1 0 1 1 1 0 tRNA methyl transferase ThiI PF02568.9 gi|15668750|ref|NP_247549.1| - 0.034 13.6 0.0 0.076 12.4 0.0 1.6 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) DUF1878 PF08963.5 gi|15668750|ref|NP_247549.1| - 0.043 14.0 0.4 0.16 12.2 0.0 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1878) AA_kinase PF00696.23 gi|15668751|ref|NP_247550.1| - 9e-57 192.3 1.5 1.1e-56 192.0 0.2 1.7 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.1 gi|15668751|ref|NP_247550.1| - 6.7e-22 76.7 2.3 1.4e-12 46.9 0.2 2.8 2 0 0 2 2 2 2 ACT domain ACT PF01842.20 gi|15668751|ref|NP_247550.1| - 1.5e-21 75.4 3.6 1.8e-10 40.0 0.1 3.3 3 1 0 3 3 3 2 ACT domain DUF2007 PF09413.5 gi|15668751|ref|NP_247550.1| - 0.082 12.7 0.6 0.64 9.8 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF2007) DUF2361 PF10153.4 gi|15668751|ref|NP_247550.1| - 0.083 13.0 1.3 0.16 12.1 0.9 1.4 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2361) DUF1131 PF06572.7 gi|15668751|ref|NP_247550.1| - 1.2 8.6 6.7 2 7.8 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1131) Antimicrobial_8 PF08103.6 gi|15668751|ref|NP_247550.1| - 1.3 9.1 5.6 0.66 10.0 0.8 2.8 2 0 0 2 2 2 0 Uperin family TPR_1 PF00515.23 gi|15668752|ref|NP_247551.1| - 3.8e-17 61.0 5.8 3.8e-08 32.6 0.8 2.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15668752|ref|NP_247551.1| - 1.1e-13 49.9 5.5 1.7e-06 27.4 0.4 2.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.1 gi|15668752|ref|NP_247551.1| - 1.2e-13 50.4 1.2 1.5e-13 50.1 0.8 1.1 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.1 gi|15668752|ref|NP_247551.1| - 3.9e-12 45.0 5.6 2.1e-06 27.0 1.3 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15668752|ref|NP_247551.1| - 3.1e-09 37.2 0.6 4.1e-09 36.8 0.3 1.3 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15668752|ref|NP_247551.1| - 3.4e-09 36.5 1.3 0.00052 19.8 0.1 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15668752|ref|NP_247551.1| - 1.3e-08 34.3 1.0 6.5e-07 29.0 0.2 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15668752|ref|NP_247551.1| - 1.3e-07 31.7 0.0 2.3e-07 31.0 0.0 1.4 2 0 0 2 2 1 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15668752|ref|NP_247551.1| - 4.3e-06 26.8 0.2 0.0033 17.9 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|15668752|ref|NP_247551.1| - 5.6e-06 26.4 0.4 0.053 14.0 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15668752|ref|NP_247551.1| - 3.3e-05 23.3 2.1 0.029 14.1 0.1 2.8 2 1 1 3 3 3 2 Tetratricopeptide repeat MIT PF04212.13 gi|15668752|ref|NP_247551.1| - 4.7e-05 23.1 2.0 0.0012 18.7 0.4 2.2 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain TPR_9 PF13371.1 gi|15668752|ref|NP_247551.1| - 0.00049 19.9 0.0 0.00059 19.6 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|15668752|ref|NP_247551.1| - 0.0005 20.1 0.7 0.0013 18.8 0.5 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.2 gi|15668752|ref|NP_247551.1| - 0.0012 18.7 0.1 0.0013 18.5 0.1 1.3 1 0 0 1 1 1 1 Domain of Unknown Function (DUF3856) Sel1 PF08238.7 gi|15668752|ref|NP_247551.1| - 0.0012 19.4 4.9 0.0065 17.0 0.5 3.4 2 2 1 3 3 3 1 Sel1 repeat NARP1 PF12569.3 gi|15668752|ref|NP_247551.1| - 0.0019 17.0 0.0 0.0021 16.8 0.0 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 PPR PF01535.15 gi|15668752|ref|NP_247551.1| - 0.0036 17.1 0.7 0.7 10.0 0.0 2.8 3 0 0 3 3 3 1 PPR repeat TPR_10 PF13374.1 gi|15668752|ref|NP_247551.1| - 0.066 13.1 0.1 0.78 9.7 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF357 PF04010.8 gi|15668752|ref|NP_247551.1| - 0.078 12.6 0.3 0.13 11.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF357) Fis1_TPR_C PF14853.1 gi|15668752|ref|NP_247551.1| - 0.081 12.8 0.3 0.75 9.7 0.0 2.1 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.9 gi|15668752|ref|NP_247551.1| - 0.097 13.1 0.2 0.24 11.9 0.0 1.7 2 0 0 2 2 1 0 Tetratricopeptide repeat TPR_3 PF07720.7 gi|15668752|ref|NP_247551.1| - 0.24 11.2 3.3 22 5.0 1.1 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat Ubiq-assoc PF09145.5 gi|15668752|ref|NP_247551.1| - 0.34 10.8 3.5 5.6 6.9 0.1 2.9 3 0 0 3 3 3 0 Ubiquitin-associated OsmC PF02566.14 gi|15668753|ref|NP_247552.1| - 3e-17 62.6 0.1 5.9e-17 61.6 0.1 1.4 1 0 0 1 1 1 1 OsmC-like protein SRI PF08236.6 gi|15668753|ref|NP_247552.1| - 0.078 12.9 1.2 5.1 7.1 0.1 2.3 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain Stk19 PF10494.4 gi|15668753|ref|NP_247552.1| - 0.13 11.6 0.8 0.4 10.0 0.2 2.0 1 1 0 2 2 2 0 Serine-threonine protein kinase 19 S4_2 PF13275.1 gi|15668753|ref|NP_247552.1| - 0.14 11.7 2.5 0.45 10.1 0.4 2.3 2 0 0 2 2 2 0 S4 domain PLDc_N PF13396.1 gi|15668754|ref|NP_247553.1| - 1.4e-11 43.9 10.3 1.4e-11 43.9 7.2 2.2 2 1 0 2 2 2 1 Phospholipase_D-nuclease N-terminal AA_permease_2 PF13520.1 gi|15668754|ref|NP_247553.1| - 0.0023 16.5 7.6 0.0025 16.4 5.3 1.0 1 0 0 1 1 1 1 Amino acid permease NfeD PF01957.13 gi|15668754|ref|NP_247553.1| - 0.0063 16.6 2.5 0.0069 16.5 1.7 1.0 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding SLAC1 PF03595.12 gi|15668754|ref|NP_247553.1| - 0.01 14.4 2.3 0.013 14.1 1.6 1.1 1 0 0 1 1 1 0 Voltage-dependent anion channel DUF2304 PF10066.4 gi|15668754|ref|NP_247553.1| - 0.045 13.6 5.4 0.062 13.1 3.8 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) Glucos_trans_II PF14264.1 gi|15668754|ref|NP_247553.1| - 0.059 12.3 5.2 0.061 12.3 3.3 1.3 1 1 0 1 1 1 0 Glucosyl transferase GtrII DUF981 PF06168.6 gi|15668754|ref|NP_247553.1| - 0.098 12.4 4.0 0.12 12.1 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF981) Tic20 PF09685.5 gi|15668754|ref|NP_247553.1| - 0.17 11.8 0.1 0.17 11.8 0.1 2.1 1 1 1 2 2 2 0 Tic20-like protein FixQ PF05545.6 gi|15668754|ref|NP_247553.1| - 0.2 11.3 0.1 0.2 11.3 0.1 2.7 2 1 0 2 2 1 0 Cbb3-type cytochrome oxidase component FixQ DUF898 PF05987.8 gi|15668754|ref|NP_247553.1| - 0.27 10.0 4.5 0.32 9.8 3.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF2500 PF10694.4 gi|15668754|ref|NP_247553.1| - 0.28 11.2 5.4 0.55 10.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2500) VKOR PF07884.9 gi|15668754|ref|NP_247553.1| - 0.28 11.0 6.2 0.41 10.5 4.3 1.3 1 1 0 1 1 1 0 Vitamin K epoxide reductase family AGTRAP PF06396.6 gi|15668754|ref|NP_247553.1| - 0.37 10.4 3.6 0.42 10.2 2.5 1.1 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) 7tm_1 PF00001.16 gi|15668754|ref|NP_247553.1| - 0.85 8.7 3.9 3.3 6.7 2.7 1.8 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Tetraspannin PF00335.15 gi|15668754|ref|NP_247553.1| - 1.1 8.5 8.8 1.4 8.1 6.1 1.2 1 0 0 1 1 1 0 Tetraspanin family BatA PF07584.6 gi|15668754|ref|NP_247553.1| - 1.2 9.4 3.7 2.8 8.1 0.1 2.1 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal DUF805 PF05656.9 gi|15668754|ref|NP_247553.1| - 1.8 8.3 7.2 4 7.2 5.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Herpes_LMP1 PF05297.6 gi|15668754|ref|NP_247553.1| - 2.2 7.1 4.8 2.5 6.9 3.3 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4064 PF13273.1 gi|15668754|ref|NP_247553.1| - 2.9 8.0 16.0 76 3.4 11.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2628 PF10947.3 gi|15668754|ref|NP_247553.1| - 5.9 6.7 8.5 7.8 6.3 5.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) SHP PF03579.8 gi|15668754|ref|NP_247553.1| - 7.6 5.9 8.0 28 4.1 4.0 2.1 2 0 0 2 2 2 0 Small hydrophobic protein dTMP_synthase PF02593.9 gi|15668755|ref|NP_247554.1| - 1.4e-62 210.9 1.2 1.5e-62 210.7 0.8 1.0 1 0 0 1 1 1 1 Thymidylate synthase DUF1858 PF08984.6 gi|15668755|ref|NP_247554.1| - 0.0022 17.6 0.2 0.42 10.2 0.0 2.7 3 0 0 3 3 3 2 Domain of unknown function (DUF1858) TrkA_N PF02254.13 gi|15668755|ref|NP_247554.1| - 0.024 14.6 0.1 0.068 13.1 0.0 1.8 2 0 0 2 2 2 0 TrkA-N domain SRP9-21 PF05486.7 gi|15668755|ref|NP_247554.1| - 0.079 12.7 0.1 1.2 8.8 0.0 2.3 2 1 0 2 2 2 0 Signal recognition particle 9 kDa protein (SRP9) SLAC1 PF03595.12 gi|15668756|ref|NP_247555.1| - 3.9e-76 255.8 52.0 4.4e-76 255.6 36.1 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel WCOR413 PF05562.6 gi|15668756|ref|NP_247555.1| - 0.016 14.7 4.9 0.046 13.2 3.4 1.8 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 Usp PF00582.21 gi|15668757|ref|NP_247556.1| - 1.2e-35 122.6 0.3 1.5e-35 122.3 0.2 1.1 1 0 0 1 1 1 1 Universal stress protein family Ribonuc_L-PSP PF01042.16 gi|15668757|ref|NP_247556.1| - 0.02 14.6 0.1 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 Endoribonuclease L-PSP Oxidored_nitro PF00148.14 gi|15668757|ref|NP_247556.1| - 0.024 13.2 0.1 0.033 12.8 0.1 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Histone_HNS PF00816.16 gi|15668757|ref|NP_247556.1| - 0.026 15.0 1.5 0.045 14.2 1.1 1.6 1 1 0 1 1 1 0 H-NS histone family ASFV_p27 PF06556.6 gi|15668757|ref|NP_247556.1| - 0.028 14.3 0.1 0.059 13.2 0.1 1.5 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus DXP_reductoisom PF02670.11 gi|15668757|ref|NP_247556.1| - 0.053 14.0 0.8 0.08 13.4 0.5 1.4 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DUF4363 PF14276.1 gi|15668757|ref|NP_247556.1| - 0.053 13.2 1.5 0.071 12.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) CbiA PF01656.18 gi|15668758|ref|NP_247557.1| - 1.2e-35 122.6 0.0 1.4e-35 122.4 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.22 gi|15668758|ref|NP_247557.1| - 2.2e-11 42.8 14.5 1.2e-05 24.6 2.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668758|ref|NP_247557.1| - 1.1e-07 32.1 25.6 7.8e-05 22.9 7.0 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain AAA_31 PF13614.1 gi|15668758|ref|NP_247557.1| - 7.9e-07 29.1 0.0 1.5e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Fer4_10 PF13237.1 gi|15668758|ref|NP_247557.1| - 1.8e-06 27.6 8.6 5.3e-06 26.1 6.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain ArsA_ATPase PF02374.10 gi|15668758|ref|NP_247557.1| - 2e-06 27.0 0.3 4.9e-05 22.5 0.0 2.6 3 0 0 3 3 3 1 Anion-transporting ATPase Fer4_6 PF12837.2 gi|15668758|ref|NP_247557.1| - 3.4e-06 26.6 13.6 0.0032 17.2 1.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15668758|ref|NP_247557.1| - 2.7e-05 24.1 12.4 0.013 15.7 2.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668758|ref|NP_247557.1| - 5.4e-05 23.3 11.1 0.0028 17.9 8.2 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668758|ref|NP_247557.1| - 5.6e-05 22.8 11.5 0.041 13.8 1.8 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668758|ref|NP_247557.1| - 0.0001 22.9 6.5 0.026 15.2 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|15668758|ref|NP_247557.1| - 0.00025 21.3 2.8 0.086 13.1 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain ParA PF10609.4 gi|15668758|ref|NP_247557.1| - 0.001 18.9 0.0 0.0021 17.9 0.0 1.5 1 0 0 1 1 1 1 ParA/MinD ATPase like Fer4_8 PF13183.1 gi|15668758|ref|NP_247557.1| - 0.0017 18.3 6.9 3.6 7.6 7.5 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668758|ref|NP_247557.1| - 0.0018 18.0 11.7 0.27 11.1 8.7 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_17 PF13207.1 gi|15668758|ref|NP_247557.1| - 0.0042 17.9 0.1 0.0042 17.9 0.0 2.6 3 0 0 3 3 2 1 AAA domain ATP_bind_1 PF03029.12 gi|15668758|ref|NP_247557.1| - 0.0051 16.3 0.0 0.015 14.8 0.0 1.8 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Fer4_3 PF12798.2 gi|15668758|ref|NP_247557.1| - 0.0054 17.2 17.3 0.033 14.7 1.5 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain AAA_18 PF13238.1 gi|15668758|ref|NP_247557.1| - 0.0059 16.9 0.6 0.015 15.5 0.1 2.1 1 1 1 2 2 1 1 AAA domain Fer4_NifH PF00142.13 gi|15668758|ref|NP_247557.1| - 0.0074 15.5 0.2 0.019 14.1 0.1 1.8 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_5 PF07728.9 gi|15668758|ref|NP_247557.1| - 0.019 14.6 0.0 0.062 13.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|15668758|ref|NP_247557.1| - 0.051 13.7 1.0 1.2 9.2 0.0 2.9 2 1 1 3 3 3 0 AAA domain AAA_16 PF13191.1 gi|15668758|ref|NP_247557.1| - 0.073 13.0 0.2 0.17 11.8 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_14 PF13173.1 gi|15668758|ref|NP_247557.1| - 0.079 12.8 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.1 gi|15668758|ref|NP_247557.1| - 0.24 11.2 6.2 0.28 11.1 0.1 2.2 2 0 0 2 2 2 0 AAA domain Fer4_18 PF13746.1 gi|15668758|ref|NP_247557.1| - 0.45 10.9 14.2 0.064 13.6 2.0 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain DUF258 PF03193.11 gi|15668758|ref|NP_247557.1| - 0.57 9.3 6.1 0.69 9.0 0.9 2.8 2 1 1 3 3 3 0 Protein of unknown function, DUF258 Fer4_15 PF13459.1 gi|15668758|ref|NP_247557.1| - 0.99 10.0 9.5 1.6 9.3 0.6 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain AAA_29 PF13555.1 gi|15668758|ref|NP_247557.1| - 1.1 8.7 3.5 3.5 7.2 0.4 2.3 2 0 0 2 2 2 0 P-loop containing region of AAA domain CbiA PF01656.18 gi|15668759|ref|NP_247558.1| - 3.9e-42 143.8 0.2 5.2e-42 143.4 0.1 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15668759|ref|NP_247558.1| - 0.0019 18.1 0.0 0.0055 16.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain ParA PF10609.4 gi|15668759|ref|NP_247558.1| - 0.003 17.3 0.1 0.0064 16.3 0.0 1.6 1 0 0 1 1 1 1 ParA/MinD ATPase like ArsA_ATPase PF02374.10 gi|15668759|ref|NP_247558.1| - 0.011 14.8 0.2 0.092 11.7 0.1 2.0 2 0 0 2 2 2 0 Anion-transporting ATPase Fer4_NifH PF00142.13 gi|15668759|ref|NP_247558.1| - 0.015 14.5 0.1 0.046 12.8 0.0 1.9 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family GFO_IDH_MocA PF01408.17 gi|15668759|ref|NP_247558.1| - 0.022 15.2 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold SRP54 PF00448.17 gi|15668759|ref|NP_247558.1| - 0.05 13.0 0.3 9.1 5.6 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MobB PF03205.9 gi|15668759|ref|NP_247558.1| - 0.12 12.0 0.6 0.89 9.2 0.0 2.3 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MipZ PF09140.6 gi|15668759|ref|NP_247558.1| - 0.16 11.0 0.0 0.31 10.0 0.0 1.5 2 0 0 2 2 2 0 ATPase MipZ AAA_17 PF13207.1 gi|15668759|ref|NP_247558.1| - 0.38 11.5 3.2 0.62 10.9 0.3 2.3 2 1 0 2 2 2 0 AAA domain Nitro_FeMo-Co PF02579.12 gi|15668760|ref|NP_247559.1| - 1e-24 86.4 0.1 1.2e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor TM1506 PF08973.5 gi|15668760|ref|NP_247559.1| - 0.071 12.6 0.2 0.13 11.8 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1893) Thioredoxin_3 PF13192.1 gi|15668761|ref|NP_247560.1| - 2.3e-24 84.9 1.4 2.7e-24 84.7 1.0 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|15668761|ref|NP_247560.1| - 0.00028 20.7 2.1 0.0031 17.4 0.2 2.4 1 1 1 2 2 2 1 Glutaredoxin PTS_IIB PF02302.12 gi|15668761|ref|NP_247560.1| - 0.00039 20.8 0.3 0.00047 20.5 0.2 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF836 PF05768.9 gi|15668761|ref|NP_247560.1| - 0.032 14.4 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF2703 PF10865.3 gi|15668761|ref|NP_247560.1| - 0.098 12.5 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) PASTA PF03793.14 gi|15668761|ref|NP_247560.1| - 0.11 12.1 0.1 0.3 10.7 0.0 1.7 2 0 0 2 2 2 0 PASTA domain FlpD PF02662.11 gi|15668761|ref|NP_247560.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit GATase PF00117.23 gi|15668761|ref|NP_247560.1| - 0.13 11.6 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase class-I CGGC PF08821.6 gi|15668762|ref|NP_247561.1| - 1.4e-30 105.5 4.3 1.7e-30 105.2 3.0 1.1 1 0 0 1 1 1 1 CGGC domain OTT_1508_deam PF14441.1 gi|15668762|ref|NP_247561.1| - 0.064 13.0 0.3 0.082 12.7 0.2 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase zf-ribbon_3 PF13248.1 gi|15668763|ref|NP_247562.1| - 0.00046 19.2 7.8 0.0057 15.8 5.4 2.2 1 1 0 1 1 1 1 zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|15668763|ref|NP_247562.1| - 0.00081 18.8 8.8 0.038 13.4 0.1 2.5 2 1 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger zf-ISL3 PF14690.1 gi|15668763|ref|NP_247562.1| - 0.0036 17.3 8.0 0.091 12.8 0.1 2.5 2 1 0 2 2 2 2 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DZR PF12773.2 gi|15668763|ref|NP_247562.1| - 0.0037 17.0 4.4 0.0067 16.2 3.1 1.4 1 1 0 1 1 1 1 Double zinc ribbon Ogr_Delta PF04606.7 gi|15668763|ref|NP_247562.1| - 0.004 16.7 1.4 0.77 9.4 0.1 2.4 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger zinc-ribbons_6 PF07191.7 gi|15668763|ref|NP_247562.1| - 0.0042 16.8 1.9 0.0055 16.4 1.3 1.4 1 0 0 1 1 1 1 zinc-ribbons YhfH PF14149.1 gi|15668763|ref|NP_247562.1| - 0.0047 16.6 0.3 1.2 9.0 0.0 2.2 2 0 0 2 2 2 1 YhfH-like protein Zn_Tnp_IS1595 PF12760.2 gi|15668763|ref|NP_247562.1| - 0.0058 16.4 6.6 9.8 6.0 4.6 2.3 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15668763|ref|NP_247562.1| - 0.006 16.0 5.6 0.46 10.0 1.2 2.4 2 1 0 2 2 2 2 zinc-ribbon domain Zn_ribbon_recom PF13408.1 gi|15668763|ref|NP_247562.1| - 0.011 16.0 6.6 0.1 12.8 0.1 2.2 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-NADH-PPase PF09297.6 gi|15668763|ref|NP_247562.1| - 0.015 14.8 0.2 4 7.0 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.1 gi|15668763|ref|NP_247562.1| - 0.018 14.7 3.2 1.4 8.6 0.3 2.4 2 0 0 2 2 2 0 Nudix N-terminal PolC_DP2 PF03833.8 gi|15668763|ref|NP_247562.1| - 0.018 12.7 0.8 0.02 12.6 0.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 TFIIS_C PF01096.13 gi|15668763|ref|NP_247562.1| - 0.028 14.0 1.0 3.3 7.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) GFA PF04828.9 gi|15668763|ref|NP_247562.1| - 0.037 13.9 1.5 2.8 7.9 0.1 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-C2H2 PF00096.21 gi|15668763|ref|NP_247562.1| - 0.049 13.9 3.7 2.3 8.7 0.4 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Gin PF10764.4 gi|15668763|ref|NP_247562.1| - 0.062 13.0 0.4 8.6 6.1 0.0 2.2 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin DNA_RNApol_7kD PF03604.8 gi|15668763|ref|NP_247562.1| - 0.073 12.5 3.4 0.75 9.3 0.4 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit RRN7 PF11781.3 gi|15668763|ref|NP_247562.1| - 0.082 12.4 0.2 5.6 6.5 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 OrfB_Zn_ribbon PF07282.6 gi|15668763|ref|NP_247562.1| - 0.093 12.4 4.4 0.22 11.1 2.9 1.7 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DNA_ligase_ZBD PF03119.11 gi|15668763|ref|NP_247562.1| - 0.1 12.3 4.2 1.3 8.7 0.1 2.5 3 0 0 3 3 2 0 NAD-dependent DNA ligase C4 zinc finger domain Prok-RING_1 PF14446.1 gi|15668763|ref|NP_247562.1| - 0.11 12.2 6.4 0.33 10.7 1.2 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 CpXC PF14353.1 gi|15668763|ref|NP_247562.1| - 0.12 12.3 2.4 5.5 6.9 0.1 2.1 1 1 1 2 2 2 0 CpXC protein HypA PF01155.14 gi|15668763|ref|NP_247562.1| - 0.13 12.0 1.3 0.17 11.5 0.9 1.3 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-TFIIB PF13453.1 gi|15668763|ref|NP_247562.1| - 0.13 11.5 7.6 0.23 10.6 5.3 1.6 1 1 0 1 1 1 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.5 gi|15668763|ref|NP_247562.1| - 0.15 12.0 8.8 44 4.1 6.3 2.3 1 1 0 1 1 1 0 Zinc ribbon domain DUF329 PF03884.9 gi|15668763|ref|NP_247562.1| - 0.16 11.5 3.9 3.7 7.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF329) A2L_zn_ribbon PF08792.5 gi|15668763|ref|NP_247562.1| - 0.16 11.4 1.7 8.9 5.9 0.1 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-IS66 PF13005.2 gi|15668763|ref|NP_247562.1| - 0.18 11.7 10.6 0.48 10.4 0.4 2.9 1 1 2 3 3 3 0 zinc-finger binding domain of transposase IS66 PhnA_Zn_Ribbon PF08274.7 gi|15668763|ref|NP_247562.1| - 0.2 11.4 9.2 1.1 9.0 0.3 2.6 3 0 0 3 3 2 0 PhnA Zinc-Ribbon zf-C2H2_4 PF13894.1 gi|15668763|ref|NP_247562.1| - 0.23 11.8 3.6 2.3 8.7 0.8 2.3 2 1 0 2 2 2 0 C2H2-type zinc finger TerY-C PF15616.1 gi|15668763|ref|NP_247562.1| - 0.29 11.0 6.0 3.7 7.4 0.9 2.1 1 1 0 2 2 2 0 TerY-C metal binding domain YdjO PF14169.1 gi|15668763|ref|NP_247562.1| - 0.41 10.1 0.1 0.41 10.1 0.1 2.1 1 1 0 2 2 2 0 Cold-inducible protein YdjO XPA_N PF01286.13 gi|15668763|ref|NP_247562.1| - 0.48 10.1 6.2 6.1 6.6 0.1 2.7 2 1 0 2 2 2 0 XPA protein N-terminal zf-C2HC5 PF06221.8 gi|15668763|ref|NP_247562.1| - 0.49 10.1 5.1 0.45 10.3 0.6 2.1 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF4428 PF14471.1 gi|15668763|ref|NP_247562.1| - 0.63 9.8 2.8 9.4 6.0 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) DUF35_N PF12172.3 gi|15668763|ref|NP_247562.1| - 1.2 9.1 5.7 2.7 8.0 0.5 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RING_3 PF14369.1 gi|15668763|ref|NP_247562.1| - 1.4 8.9 6.4 12 5.9 1.8 2.4 2 1 0 2 2 2 0 zinc-finger NOB1_Zn_bind PF08772.6 gi|15668763|ref|NP_247562.1| - 1.6 8.6 4.7 12 5.7 0.6 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like TF_Zn_Ribbon PF08271.7 gi|15668763|ref|NP_247562.1| - 2 7.7 10.5 1.2 8.4 0.2 2.5 2 1 0 2 2 2 0 TFIIB zinc-binding UPF0547 PF10571.4 gi|15668763|ref|NP_247562.1| - 2.1 8.1 10.6 5.1 6.8 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 RNA_POL_M_15KD PF02150.11 gi|15668763|ref|NP_247562.1| - 2.1 8.0 6.3 15 5.3 1.2 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-C3HC4_3 PF13920.1 gi|15668763|ref|NP_247562.1| - 2.5 7.8 6.9 35 4.1 4.8 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-HYPF PF07503.7 gi|15668763|ref|NP_247562.1| - 2.8 7.4 8.2 10 5.6 0.2 2.9 2 1 1 3 3 3 0 HypF finger Cys_rich_KTR PF14205.1 gi|15668763|ref|NP_247562.1| - 3.7 7.0 9.7 2 7.9 1.2 2.6 2 1 0 2 2 2 0 Cysteine-rich KTR Lar_restr_allev PF14354.1 gi|15668763|ref|NP_247562.1| - 4.4 7.6 8.1 1.1e+02 3.2 5.6 2.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-HIT PF04438.11 gi|15668763|ref|NP_247562.1| - 5 6.8 6.7 23 4.7 2.0 2.3 2 1 0 2 2 2 0 HIT zinc finger ADK_lid PF05191.9 gi|15668763|ref|NP_247562.1| - 7.5 6.3 7.4 13 5.5 0.9 2.5 2 1 0 2 2 2 0 Adenylate kinase, active site lid zf-H2C2_2 PF13465.1 gi|15668763|ref|NP_247562.1| - 7.8 6.9 6.3 13 6.3 0.4 2.5 2 1 0 2 2 2 0 Zinc-finger double domain DUF318 PF03773.8 gi|15668764|ref|NP_247563.1| - 3.6e-108 361.1 30.4 4.4e-108 360.8 21.1 1.0 1 0 0 1 1 1 1 Predicted permease Sec62 PF03839.11 gi|15668765|ref|NP_247564.1| - 0.00019 20.9 2.1 0.00025 20.5 1.5 1.1 1 0 0 1 1 1 1 Translocation protein Sec62 DUF2207 PF09972.4 gi|15668765|ref|NP_247564.1| - 0.0011 17.7 2.0 0.0013 17.4 1.4 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Mnd1 PF03962.10 gi|15668765|ref|NP_247564.1| - 0.0036 16.9 5.2 0.0047 16.5 3.6 1.1 1 0 0 1 1 1 1 Mnd1 family EMP24_GP25L PF01105.19 gi|15668765|ref|NP_247564.1| - 0.0063 16.2 6.5 0.012 15.3 4.5 1.5 1 1 0 1 1 1 1 emp24/gp25L/p24 family/GOLD FlxA PF14282.1 gi|15668765|ref|NP_247564.1| - 0.016 15.1 3.4 0.023 14.6 2.3 1.3 1 0 0 1 1 1 0 FlxA-like protein Snapin_Pallidin PF14712.1 gi|15668765|ref|NP_247564.1| - 0.028 14.7 7.1 0.028 14.7 2.4 2.0 1 1 1 2 2 2 0 Snapin/Pallidin DUF1640 PF07798.6 gi|15668765|ref|NP_247564.1| - 0.08 12.9 4.2 0.12 12.3 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF3373 PF11853.3 gi|15668765|ref|NP_247564.1| - 0.086 11.3 1.9 0.11 11.0 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Sas10_Utp3 PF04000.10 gi|15668765|ref|NP_247564.1| - 0.087 13.0 2.9 0.18 12.0 2.0 1.5 1 0 0 1 1 1 0 Sas10/Utp3/C1D family APG6 PF04111.7 gi|15668765|ref|NP_247564.1| - 0.11 11.4 8.4 0.15 11.0 5.8 1.1 1 0 0 1 1 1 0 Autophagy protein Apg6 Syntaxin PF00804.20 gi|15668765|ref|NP_247564.1| - 0.15 12.2 3.6 0.21 11.7 2.5 1.2 1 0 0 1 1 1 0 Syntaxin DUF2951 PF11166.3 gi|15668765|ref|NP_247564.1| - 0.16 11.7 3.8 0.26 11.1 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) Laminin_II PF06009.7 gi|15668765|ref|NP_247564.1| - 0.17 11.6 3.3 0.26 11.0 2.3 1.3 1 0 0 1 1 1 0 Laminin Domain II DUF2115 PF09888.4 gi|15668765|ref|NP_247564.1| - 0.48 10.5 3.6 0.65 10.0 2.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) bZIP_1 PF00170.16 gi|15668765|ref|NP_247564.1| - 0.55 10.2 12.7 0.78 9.7 4.0 2.4 1 1 1 2 2 2 0 bZIP transcription factor OmpH PF03938.9 gi|15668765|ref|NP_247564.1| - 0.6 10.0 4.6 0.82 9.5 3.2 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4337 PF14235.1 gi|15668765|ref|NP_247564.1| - 0.81 9.5 9.7 4.8 6.9 6.7 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF342 PF03961.8 gi|15668765|ref|NP_247564.1| - 1.1 7.6 7.5 1.4 7.2 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) Pox_H7 PF04787.7 gi|15668765|ref|NP_247564.1| - 1.1 9.0 5.3 0.73 9.6 2.0 1.8 1 1 1 2 2 2 0 Late protein H7 DUF972 PF06156.8 gi|15668765|ref|NP_247564.1| - 1.1 9.5 8.4 2.6 8.4 5.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF972) XisI PF08869.6 gi|15668765|ref|NP_247564.1| - 1.5 8.9 6.3 1.6 8.8 3.6 1.6 1 1 1 2 2 2 0 XisI protein DUF106 PF01956.11 gi|15668765|ref|NP_247564.1| - 2 7.9 8.0 4.1 6.8 5.5 1.8 1 1 0 1 1 1 0 Integral membrane protein DUF106 TMF_DNA_bd PF12329.3 gi|15668765|ref|NP_247564.1| - 5.3 6.9 14.5 6.3 6.6 0.5 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding HTH_3 PF01381.17 gi|15668766|ref|NP_247565.1| - 9.7e-12 44.5 5.2 3e-11 42.9 2.6 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|15668766|ref|NP_247565.1| - 5e-08 32.8 2.4 1.3e-07 31.5 1.6 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|15668766|ref|NP_247565.1| - 1.1e-07 31.3 1.3 1.9e-07 30.6 0.8 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|15668766|ref|NP_247565.1| - 7.7e-07 29.2 0.0 1.3e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain NMD3 PF04981.8 gi|15668766|ref|NP_247565.1| - 0.00076 18.6 2.7 0.02 14.0 0.2 2.1 2 0 0 2 2 2 2 NMD3 family HTH_37 PF13744.1 gi|15668766|ref|NP_247565.1| - 0.02 14.6 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.1 gi|15668766|ref|NP_247565.1| - 0.021 14.4 0.1 0.071 12.6 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_20 PF12840.2 gi|15668766|ref|NP_247565.1| - 0.023 14.5 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain zf-C4_ClpX PF06689.8 gi|15668766|ref|NP_247565.1| - 0.029 13.8 1.0 0.049 13.1 0.7 1.4 1 0 0 1 1 1 0 ClpX C4-type zinc finger HTH_26 PF13443.1 gi|15668766|ref|NP_247565.1| - 0.047 13.8 1.2 0.076 13.2 0.2 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Sigma70_r1_1 PF03979.9 gi|15668766|ref|NP_247565.1| - 0.052 13.4 0.7 0.12 12.2 0.5 1.6 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 HTH_17 PF12728.2 gi|15668766|ref|NP_247565.1| - 0.093 12.9 0.0 0.56 10.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|15668766|ref|NP_247565.1| - 0.094 12.4 0.0 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain HTH_5 PF01022.15 gi|15668766|ref|NP_247565.1| - 0.12 12.1 0.5 19 4.9 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family TM_helix PF05552.7 gi|15668767|ref|NP_247566.1| - 0.018 14.6 1.2 0.018 14.6 0.8 2.8 3 0 0 3 3 3 0 Conserved TM helix FtsX PF02687.16 gi|15668767|ref|NP_247566.1| - 2.8 7.7 20.8 1 9.1 5.3 2.3 2 1 0 2 2 2 0 FtsX-like permease family TruD PF01142.13 gi|15668768|ref|NP_247567.1| - 2.2e-81 273.4 0.0 7.8e-80 268.3 0.0 2.7 1 1 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) ATP-grasp_5 PF13549.1 gi|15668770|ref|NP_247570.1| - 1.3e-54 184.7 0.1 2.8e-54 183.6 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|15668770|ref|NP_247570.1| - 6.1e-53 178.1 0.1 5e-52 175.1 0.0 2.4 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|15668770|ref|NP_247570.1| - 2.6e-29 101.7 0.1 2.8e-28 98.3 0.0 2.9 4 0 0 4 4 4 1 CoA binding domain CoA_binding PF02629.14 gi|15668770|ref|NP_247570.1| - 1.4e-19 70.3 0.8 7.2e-19 68.1 0.5 2.3 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.5 gi|15668770|ref|NP_247570.1| - 2.9e-06 26.8 0.1 6.8e-06 25.6 0.1 1.6 1 0 0 1 1 1 1 ATP-grasp domain NAD_Gly3P_dh_N PF01210.18 gi|15668770|ref|NP_247570.1| - 0.011 15.4 0.1 0.042 13.5 0.0 2.0 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ATP-grasp_4 PF13535.1 gi|15668770|ref|NP_247570.1| - 0.021 14.5 0.0 0.1 12.3 0.0 2.0 1 1 1 2 2 2 0 ATP-grasp domain DUF2018 PF09442.5 gi|15668770|ref|NP_247570.1| - 0.044 14.3 0.5 0.044 14.3 0.3 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF2018) Ligase_CoA PF00549.14 gi|15668770|ref|NP_247570.1| - 0.097 12.2 0.0 0.53 9.8 0.0 2.2 2 0 0 2 2 2 0 CoA-ligase Proteasome PF00227.21 gi|15668771|ref|NP_247571.1| - 1.5e-68 229.8 0.2 1.5e-68 229.8 0.2 1.5 2 0 0 2 2 2 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|15668771|ref|NP_247571.1| - 1.6e-14 52.9 0.6 4.2e-14 51.5 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature DNA_pol3_delta2 PF13177.1 gi|15668771|ref|NP_247571.1| - 0.023 14.3 1.0 0.046 13.3 0.7 1.5 1 0 0 1 1 1 0 DNA polymerase III, delta subunit ROS_MUCR PF05443.6 gi|15668771|ref|NP_247571.1| - 0.032 14.0 0.6 0.19 11.4 0.7 2.0 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein PHP PF02811.14 gi|15668771|ref|NP_247571.1| - 0.046 13.5 0.1 0.079 12.7 0.0 1.3 1 1 0 1 1 1 0 PHP domain SBDS PF01172.13 gi|15668772|ref|NP_247572.1| - 2e-27 94.8 0.7 4.4e-27 93.7 0.5 1.6 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|15668772|ref|NP_247572.1| - 2.2e-27 95.2 0.5 3.4e-27 94.6 0.3 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain UPF0262 PF06793.7 gi|15668772|ref|NP_247572.1| - 0.025 14.3 0.3 0.041 13.6 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0262) Ribonucleas_3_3 PF14622.1 gi|15668772|ref|NP_247572.1| - 0.11 12.3 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease-III-like Ribosomal_L37ae PF01780.14 gi|15668773|ref|NP_247573.1| - 3.5e-35 119.7 3.5 3.8e-35 119.6 2.4 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family TF_Zn_Ribbon PF08271.7 gi|15668773|ref|NP_247573.1| - 0.0016 17.7 0.2 0.0027 16.9 0.2 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|15668773|ref|NP_247573.1| - 0.0028 17.2 0.6 0.0051 16.4 0.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Rubredoxin PF00301.15 gi|15668773|ref|NP_247573.1| - 0.0086 15.9 3.9 1.1 9.2 0.3 2.4 2 0 0 2 2 2 2 Rubredoxin DNA_RNApol_7kD PF03604.8 gi|15668773|ref|NP_247573.1| - 0.017 14.6 2.3 1.4 8.4 0.1 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Prok-RING_1 PF14446.1 gi|15668773|ref|NP_247573.1| - 0.023 14.4 1.0 0.033 13.9 0.7 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 A2L_zn_ribbon PF08792.5 gi|15668773|ref|NP_247573.1| - 0.03 13.7 1.2 0.075 12.5 0.9 1.6 1 1 0 1 1 1 0 A2L zinc ribbon domain zf-ribbon_3 PF13248.1 gi|15668773|ref|NP_247573.1| - 0.037 13.2 3.2 3.4 7.0 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|15668773|ref|NP_247573.1| - 0.038 13.8 1.0 0.11 12.3 0.7 1.8 1 1 0 1 1 1 0 Double zinc ribbon DUF4428 PF14471.1 gi|15668773|ref|NP_247573.1| - 0.041 13.6 1.3 0.087 12.5 0.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) RPA_interact_C PF14768.1 gi|15668773|ref|NP_247573.1| - 0.044 14.1 0.0 0.056 13.8 0.0 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal zinc_ribbon_2 PF13240.1 gi|15668773|ref|NP_247573.1| - 0.049 13.1 5.0 0.69 9.4 3.4 2.2 1 1 2 3 3 3 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|15668773|ref|NP_247573.1| - 0.051 13.8 2.1 0.092 13.0 1.4 1.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar NinG PF05766.7 gi|15668773|ref|NP_247573.1| - 0.068 12.9 0.7 0.077 12.7 0.5 1.1 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein zf-Mss51 PF13824.1 gi|15668773|ref|NP_247573.1| - 0.079 12.8 1.3 0.17 11.7 0.0 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1610 PF07754.6 gi|15668773|ref|NP_247573.1| - 0.085 12.9 1.5 0.085 12.9 1.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) DUF2296 PF10058.4 gi|15668773|ref|NP_247573.1| - 0.086 12.6 2.6 3.7 7.3 0.1 2.2 1 1 1 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Zn_Tnp_IS1595 PF12760.2 gi|15668773|ref|NP_247573.1| - 0.11 12.3 2.1 0.18 11.6 1.5 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|15668773|ref|NP_247573.1| - 0.14 12.1 1.6 0.36 10.8 1.0 1.7 1 1 1 2 2 2 0 Zinc ribbon domain Rad50_zn_hook PF04423.9 gi|15668773|ref|NP_247573.1| - 0.16 11.4 0.5 0.35 10.3 0.1 1.8 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C2H2_4 PF13894.1 gi|15668773|ref|NP_247573.1| - 0.19 12.1 1.3 5.7 7.5 0.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger DUF4379 PF14311.1 gi|15668773|ref|NP_247573.1| - 0.3 10.9 3.0 7.5 6.4 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) Desulfoferrod_N PF06397.7 gi|15668773|ref|NP_247573.1| - 0.63 9.4 3.1 0.95 8.9 0.5 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-C2H2 PF00096.21 gi|15668773|ref|NP_247573.1| - 0.69 10.3 2.6 6.5 7.3 0.2 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-HIT PF04438.11 gi|15668773|ref|NP_247573.1| - 1.2 8.8 6.6 0.98 9.1 2.4 2.0 1 1 1 2 2 2 0 HIT zinc finger Auto_anti-p27 PF06677.7 gi|15668773|ref|NP_247573.1| - 1.3 8.8 4.0 3.6 7.4 2.8 1.7 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Ribosomal_L37e PF01907.14 gi|15668773|ref|NP_247573.1| - 1.8 8.4 5.0 1 9.1 1.4 2.0 1 1 1 2 2 2 0 Ribosomal protein L37e zf-BED PF02892.10 gi|15668773|ref|NP_247573.1| - 4.9 6.9 5.8 4.6 7.0 0.2 2.2 1 1 1 2 2 2 0 BED zinc finger zf-ISL3 PF14690.1 gi|15668773|ref|NP_247573.1| - 8 6.5 7.7 4.1 7.5 0.4 2.6 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Brix PF04427.13 gi|15668774|ref|NP_247575.1| - 4e-12 46.1 0.4 6.8e-12 45.4 0.3 1.6 1 1 0 1 1 1 1 Brix domain DUF4270 PF14092.1 gi|15668774|ref|NP_247575.1| - 0.021 13.4 0.1 0.025 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4270) Ribosomal_L18ae PF01775.12 gi|15668775|ref|NP_247577.1| - 2e-09 37.4 0.0 2.5e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal L18ae/LX protein domain PI3Ka PF00613.15 gi|15668775|ref|NP_247577.1| - 0.075 12.1 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) DUF2666 PF10869.3 gi|15668776|ref|NP_247578.1| - 6.2e-58 194.4 10.9 7e-58 194.3 7.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2666) Endonuc-MspI PF09208.5 gi|15668776|ref|NP_247578.1| - 0.0024 16.9 0.4 0.0036 16.4 0.3 1.3 1 0 0 1 1 1 1 Restriction endonuclease MspI DUF4511 PF14974.1 gi|15668776|ref|NP_247578.1| - 0.022 14.4 0.1 0.19 11.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4511) DUF2717 PF10911.3 gi|15668776|ref|NP_247578.1| - 0.055 12.9 0.0 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2717) Phage_connect_1 PF05135.8 gi|15668776|ref|NP_247578.1| - 0.093 12.9 4.0 0.4 10.8 2.0 2.3 1 1 1 2 2 2 0 Phage gp6-like head-tail connector protein ATP-cone PF03477.11 gi|15668776|ref|NP_247578.1| - 0.14 12.5 1.3 0.41 11.1 0.9 1.9 1 1 0 1 1 1 0 ATP cone domain AF0941-like PF14591.1 gi|15668776|ref|NP_247578.1| - 0.41 10.7 7.2 0.84 9.6 4.9 1.7 1 1 0 1 1 1 0 AF0941-like DUF3283 PF11686.3 gi|15668776|ref|NP_247578.1| - 0.95 9.3 3.6 0.83 9.4 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3283) Radical_SAM PF04055.16 gi|15668777|ref|NP_247579.1| - 5.6e-12 46.1 0.6 1.5e-10 41.4 0.2 2.7 2 1 0 2 2 2 1 Radical SAM superfamily BATS PF06968.8 gi|15668777|ref|NP_247579.1| - 0.0021 17.8 0.0 0.0049 16.6 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain CesA PF11439.3 gi|15668777|ref|NP_247579.1| - 0.053 13.4 1.2 0.15 12.0 0.9 1.8 1 0 0 1 1 1 0 Type III secretion system filament chaperone CesA DUF3596 PF12167.3 gi|15668777|ref|NP_247579.1| - 0.44 10.1 2.2 0.67 9.5 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3596) MethyltransfD12 PF02086.10 gi|15668778|ref|NP_247580.1| - 1.8e-82 276.7 12.1 2e-82 276.5 8.4 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_26 PF13659.1 gi|15668778|ref|NP_247580.1| - 0.0046 16.9 0.0 0.0097 15.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Complex1_LYR PF05347.10 gi|15668778|ref|NP_247580.1| - 0.082 12.7 0.4 0.082 12.7 0.3 1.8 2 0 0 2 2 2 0 Complex 1 protein (LYR family) TPX2 PF06886.6 gi|15668778|ref|NP_247580.1| - 3.2 7.8 4.8 1.4 9.0 1.5 1.8 2 0 0 2 2 2 0 Targeting protein for Xklp2 (TPX2) DUF2197 PF09963.4 gi|15668779|ref|NP_247581.1| - 0.059 13.3 1.3 0.56 10.2 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) DpnII PF04556.7 gi|15668780|ref|NP_247582.1| - 4.6e-110 367.1 28.7 5.2e-110 367.0 19.9 1.0 1 0 0 1 1 1 1 DpnII restriction endonuclease SSV1_ORF_D-335 PF07935.6 gi|15668780|ref|NP_247582.1| - 0.14 11.9 2.8 0.15 11.8 0.3 2.3 1 1 1 2 2 2 0 ORF D-335-like protein Thi4 PF01946.12 gi|15668781|ref|NP_247583.1| - 9.5e-101 335.6 2.8 1.2e-100 335.3 1.9 1.1 1 0 0 1 1 1 1 Thi4 family DAO PF01266.19 gi|15668781|ref|NP_247583.1| - 1.3e-15 57.2 5.3 3.1e-10 39.4 0.5 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|15668781|ref|NP_247583.1| - 2.3e-10 40.3 1.5 6.8e-10 38.8 1.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|15668781|ref|NP_247583.1| - 2.6e-10 39.7 6.5 8.6e-07 28.1 0.2 3.0 3 0 0 3 3 3 3 FAD binding domain FAD_oxidored PF12831.2 gi|15668781|ref|NP_247583.1| - 3.1e-09 36.4 1.2 5.7e-09 35.5 0.8 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|15668781|ref|NP_247583.1| - 8.7e-08 32.2 0.0 3.6e-06 26.9 0.1 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|15668781|ref|NP_247583.1| - 1.5e-07 30.8 0.3 2.6e-07 30.0 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|15668781|ref|NP_247583.1| - 3.3e-06 25.8 2.4 3.6e-06 25.7 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.1 gi|15668781|ref|NP_247583.1| - 3.6e-05 23.9 0.5 0.00054 20.0 0.2 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|15668781|ref|NP_247583.1| - 0.00014 20.8 0.3 0.00051 19.0 0.2 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox PF00070.22 gi|15668781|ref|NP_247583.1| - 0.00017 21.9 0.9 0.0012 19.2 0.3 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.19 gi|15668781|ref|NP_247583.1| - 0.00042 19.5 0.1 0.0026 16.8 0.0 1.9 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.1 gi|15668781|ref|NP_247583.1| - 0.0019 18.0 1.7 0.0043 16.8 0.4 2.1 3 0 0 3 3 3 1 FAD-NAD(P)-binding GIDA PF01134.17 gi|15668781|ref|NP_247583.1| - 0.0047 15.8 0.3 0.0047 15.8 0.2 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_7 PF13241.1 gi|15668781|ref|NP_247583.1| - 0.023 14.9 0.1 0.04 14.1 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Trp_halogenase PF04820.9 gi|15668781|ref|NP_247583.1| - 0.025 13.2 0.3 0.17 10.4 0.0 1.9 2 0 0 2 2 2 0 Tryptophan halogenase Shikimate_DH PF01488.15 gi|15668781|ref|NP_247583.1| - 0.034 14.2 0.0 0.084 12.9 0.0 1.6 2 0 0 2 2 1 0 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.13 gi|15668781|ref|NP_247583.1| - 0.053 13.1 0.2 0.13 11.8 0.0 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.16 gi|15668781|ref|NP_247583.1| - 0.066 13.0 0.1 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 ThiF family Aminotran_3 PF00202.16 gi|161579526|ref|NP_247585.2| - 6.9e-72 242.1 0.0 8.1e-72 241.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|161579526|ref|NP_247585.2| - 2.7e-06 26.5 0.0 3.6e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DUF167 PF02594.11 gi|161579526|ref|NP_247585.2| - 0.022 14.6 0.0 5.1 7.0 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised ACR, YggU family COG1872 Beta_elim_lyase PF01212.16 gi|161579526|ref|NP_247585.2| - 0.039 13.0 0.0 0.062 12.4 0.0 1.4 1 1 0 1 1 1 0 Beta-eliminating lyase NTP_transf_2 PF01909.18 gi|15668784|ref|NP_247586.1| - 1.2e-16 60.7 1.5 1.6e-16 60.3 1.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15668784|ref|NP_247586.1| - 0.012 15.6 0.1 0.016 15.2 0.1 1.4 1 1 0 1 1 1 0 DNA polymerase beta palm HEPN PF05168.9 gi|15668785|ref|NP_247587.1| - 1.2e-26 92.8 3.4 1.6e-26 92.5 2.4 1.1 1 0 0 1 1 1 1 HEPN domain DUF4398 PF14346.1 gi|15668785|ref|NP_247587.1| - 0.011 15.8 0.9 0.011 15.8 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4398) Tox-REase-3 PF15647.1 gi|15668785|ref|NP_247587.1| - 0.031 14.0 0.0 0.054 13.2 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 3 ODR4-like PF14778.1 gi|15668785|ref|NP_247587.1| - 0.055 12.1 0.0 0.076 11.6 0.0 1.2 1 0 0 1 1 1 0 Olfactory receptor 4-like ODC_AZ PF02100.12 gi|15668785|ref|NP_247587.1| - 0.1 12.0 0.1 0.15 11.5 0.1 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme PaREP1 PF05942.6 gi|15668785|ref|NP_247587.1| - 0.13 12.1 2.8 0.27 11.1 1.9 1.7 1 1 0 1 1 1 0 Archaeal PaREP1/PaREP8 family Polysacc_synt_C PF14667.1 gi|15668786|ref|NP_247588.1| - 0.071 12.9 7.5 0.084 12.6 5.2 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain DUF2583 PF10762.4 gi|15668786|ref|NP_247588.1| - 0.34 11.0 2.0 0.27 11.3 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2583) EmrE PF13536.1 gi|15668786|ref|NP_247588.1| - 0.65 10.2 7.7 0.86 9.8 5.3 1.2 1 0 0 1 1 1 0 Multidrug resistance efflux transporter Cation_ATPase_C PF00689.16 gi|15668786|ref|NP_247588.1| - 2.3 7.6 7.4 6.5 6.2 4.9 1.7 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF2839 PF10999.3 gi|15668786|ref|NP_247588.1| - 2.7 8.0 7.7 3.7 7.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2839) DUF4199 PF13858.1 gi|15668786|ref|NP_247588.1| - 3.1 7.7 10.0 4.5 7.1 6.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) DUF4131 PF13567.1 gi|15668786|ref|NP_247588.1| - 6.9 6.0 6.6 8 5.8 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DHHA2 PF02833.9 gi|15668788|ref|NP_247590.1| - 1.2e-42 145.1 0.8 3.6e-42 143.5 0.8 1.7 2 0 0 2 2 2 1 DHHA2 domain DHH PF01368.15 gi|15668788|ref|NP_247590.1| - 2.2e-28 98.7 0.0 5.7e-28 97.3 0.0 1.7 1 0 0 1 1 1 1 DHH family AA_permease_2 PF13520.1 gi|15668789|ref|NP_247591.1| - 1.2e-38 132.8 62.7 1.5e-38 132.4 43.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|15668789|ref|NP_247591.1| - 1.2e-22 79.9 62.8 5.5e-22 77.7 43.5 1.9 1 1 0 1 1 1 1 Amino acid permease Trp_Tyr_perm PF03222.8 gi|15668789|ref|NP_247591.1| - 8e-05 21.6 26.3 8e-05 21.6 18.3 2.2 1 1 1 2 2 2 1 Tryptophan/tyrosine permease family SLA_LP_auto_ag PF05889.8 gi|15668790|ref|NP_247592.1| - 3e-175 582.3 0.1 3.5e-175 582.1 0.1 1.0 1 0 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Beta_elim_lyase PF01212.16 gi|15668790|ref|NP_247592.1| - 9.8e-09 34.7 0.0 1.3e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Pyridoxal_deC PF00282.14 gi|15668790|ref|NP_247592.1| - 1.2e-05 23.9 0.0 3.2e-05 22.5 0.0 1.6 1 1 1 2 2 2 1 Pyridoxal-dependent decarboxylase conserved domain Adenine_deam_C PF13382.1 gi|15668790|ref|NP_247592.1| - 0.14 11.2 0.0 5.6 6.0 0.0 2.6 2 0 0 2 2 2 0 Adenine deaminase C-terminal domain MMS22L_N PF14910.1 gi|15668790|ref|NP_247592.1| - 0.16 10.2 0.0 0.23 9.6 0.0 1.1 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal Peptidase_M50 PF02163.17 gi|15668791|ref|NP_247594.1| - 1.3e-17 63.4 11.7 8.4e-17 60.7 8.1 2.2 1 1 0 1 1 1 1 Peptidase family M50 FA_desaturase PF00487.19 gi|15668791|ref|NP_247594.1| - 0.025 14.0 0.7 0.025 14.0 0.5 2.5 1 1 1 2 2 2 0 Fatty acid desaturase TRP PF06011.7 gi|15668791|ref|NP_247594.1| - 0.043 12.3 4.9 0.058 11.9 2.8 1.5 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel PAP2 PF01569.16 gi|15668792|ref|NP_247595.1| - 0.00021 20.9 22.5 0.0085 15.7 15.6 2.6 1 1 0 1 1 1 1 PAP2 superfamily Sec20 PF03908.8 gi|15668792|ref|NP_247595.1| - 0.049 13.3 1.1 0.089 12.5 0.4 1.7 1 1 0 1 1 1 0 Sec20 PDH PF02153.12 gi|15668793|ref|NP_247596.1| - 5.3e-88 294.2 0.2 1.6e-87 292.6 0.1 1.7 2 0 0 2 2 2 1 Prephenate dehydrogenase F420_oxidored PF03807.12 gi|15668793|ref|NP_247596.1| - 1.9e-11 44.2 0.2 5.5e-11 42.7 0.1 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|15668793|ref|NP_247596.1| - 2e-07 31.0 0.0 5.4e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.7 gi|15668793|ref|NP_247596.1| - 1.1e-06 28.1 0.1 2.6e-06 26.8 0.1 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain FDX-ACB PF03147.9 gi|15668793|ref|NP_247596.1| - 6.5e-06 26.2 0.1 2.5e-05 24.3 0.1 2.0 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain Semialdhyde_dh PF01118.19 gi|15668793|ref|NP_247596.1| - 9e-05 22.7 0.1 0.00066 19.9 0.0 2.3 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|15668793|ref|NP_247596.1| - 0.00048 19.8 0.5 0.0019 17.9 0.4 2.0 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.14 gi|15668793|ref|NP_247596.1| - 0.0013 17.8 0.2 0.0089 15.2 0.0 2.2 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|15668793|ref|NP_247596.1| - 0.0026 17.2 0.1 0.0064 15.9 0.0 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Saccharop_dh PF03435.13 gi|15668793|ref|NP_247596.1| - 0.011 14.7 0.0 0.019 13.9 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase adh_short PF00106.20 gi|15668793|ref|NP_247596.1| - 0.042 13.7 0.0 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 short chain dehydrogenase LytR_C PF13399.1 gi|15668793|ref|NP_247596.1| - 0.061 13.6 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator TIR_2 PF13676.1 gi|15668793|ref|NP_247596.1| - 0.1 12.7 0.0 1.7 8.8 0.0 2.4 2 0 0 2 2 2 0 TIR domain KR PF08659.5 gi|15668793|ref|NP_247596.1| - 0.19 11.3 0.0 0.43 10.2 0.0 1.6 1 0 0 1 1 1 0 KR domain DUF123 PF01986.11 gi|15668794|ref|NP_247597.1| - 1.4e-31 108.5 0.5 2.2e-30 104.7 0.1 2.5 3 0 0 3 3 3 1 Domain of unknown function DUF123 HhH-GPD PF00730.20 gi|15668794|ref|NP_247597.1| - 2.6e-26 92.0 0.2 5.8e-26 90.8 0.0 1.7 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|15668794|ref|NP_247597.1| - 4.7e-10 38.5 0.0 1.2e-09 37.2 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|15668794|ref|NP_247597.1| - 0.00036 20.6 1.2 0.019 15.1 0.8 2.4 1 1 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|15668794|ref|NP_247597.1| - 0.0055 16.5 0.0 4.1 7.3 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif DUF22 PF01629.11 gi|15668795|ref|NP_247598.1| - 6e-30 103.0 1.8 7.7e-30 102.6 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF22 ATP-synt_D PF01813.12 gi|15668796|ref|NP_247599.1| - 3.5e-71 238.8 13.4 4e-71 238.6 9.3 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DivIVA PF05103.8 gi|15668796|ref|NP_247599.1| - 0.13 12.2 0.1 0.13 12.2 0.1 2.4 2 1 0 2 2 2 0 DivIVA protein Exonuc_VII_S PF02609.11 gi|15668796|ref|NP_247599.1| - 0.61 9.9 8.2 1.3 8.8 0.3 3.5 3 0 0 3 3 3 0 Exonuclease VII small subunit PaaSYMP PF14738.1 gi|15668796|ref|NP_247599.1| - 2.7 7.7 13.2 0.048 13.3 3.7 1.9 2 1 0 2 2 2 0 Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1 IncA PF04156.9 gi|15668796|ref|NP_247599.1| - 2.9 7.4 7.4 5.8 6.4 0.5 2.3 2 0 0 2 2 2 0 IncA protein GAS PF13851.1 gi|15668796|ref|NP_247599.1| - 4.8 6.3 15.9 0.17 11.0 4.1 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding AIRC PF00731.15 gi|15668797|ref|NP_247600.1| - 1.4e-57 193.2 1.0 1.5e-57 193.0 0.7 1.0 1 0 0 1 1 1 1 AIR carboxylase Fe-ADH_2 PF13685.1 gi|15668797|ref|NP_247600.1| - 0.0017 17.6 0.6 0.0023 17.2 0.1 1.4 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase PrpR_N PF06506.6 gi|15668797|ref|NP_247600.1| - 0.0053 16.1 0.4 0.0064 15.9 0.3 1.3 1 1 0 1 1 1 1 Propionate catabolism activator Glutaredoxin PF00462.19 gi|15668797|ref|NP_247600.1| - 0.0096 15.8 0.2 0.042 13.8 0.0 2.0 2 0 0 2 2 2 1 Glutaredoxin mTERF PF02536.9 gi|15668797|ref|NP_247600.1| - 0.018 13.6 0.1 0.024 13.2 0.1 1.5 1 1 0 1 1 1 0 mTERF DXP_reductoisom PF02670.11 gi|15668797|ref|NP_247600.1| - 0.11 13.0 0.3 1.1 9.7 0.0 2.1 2 0 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sec20 PF03908.8 gi|15668797|ref|NP_247600.1| - 0.11 12.2 0.0 12 5.6 0.0 2.1 2 0 0 2 2 2 0 Sec20 Fumerase_C PF05683.7 gi|15668798|ref|NP_247601.1| - 9.6e-59 197.9 0.1 1.1e-58 197.8 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus DUF316 PF03761.10 gi|15668798|ref|NP_247601.1| - 0.08 12.2 0.1 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF316) DUF167 PF02594.11 gi|15668799|ref|NP_247602.1| - 9.9e-25 86.2 1.7 1.4e-24 85.7 1.2 1.2 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Ribosomal_L11 PF00298.14 gi|15668799|ref|NP_247602.1| - 0.014 15.4 0.1 0.034 14.2 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain RNA_pol_Rpb1_7 PF04990.7 gi|15668799|ref|NP_247602.1| - 0.16 11.6 0.6 0.19 11.4 0.4 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 7 Radical_SAM PF04055.16 gi|15668800|ref|NP_247603.1| - 1.7e-21 77.1 0.8 1.8e-19 70.5 0.0 2.6 2 0 0 2 2 2 2 Radical SAM superfamily Fer4_12 PF13353.1 gi|15668800|ref|NP_247603.1| - 1e-08 35.3 1.4 3.2e-08 33.7 0.0 2.3 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|15668800|ref|NP_247603.1| - 5.9e-08 32.7 0.5 3.9e-07 30.0 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S single cluster domain RimK PF08443.6 gi|15668801|ref|NP_247604.1| - 9.9e-44 149.0 0.3 1.3e-43 148.7 0.2 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|15668801|ref|NP_247604.1| - 1.4e-20 73.1 0.1 1.8e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_4 PF13535.1 gi|15668801|ref|NP_247604.1| - 1.1e-13 51.3 0.0 1.5e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|15668801|ref|NP_247604.1| - 6.8e-11 42.2 0.8 1.6e-10 41.1 0.6 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.1 gi|15668801|ref|NP_247604.1| - 4.7e-08 32.1 0.1 0.00017 20.5 0.0 2.4 1 1 1 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_Ter PF15632.1 gi|15668801|ref|NP_247604.1| - 2.2e-07 29.9 0.0 5.5e-06 25.3 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_TupA PF14305.1 gi|15668801|ref|NP_247604.1| - 0.0093 15.2 0.1 0.03 13.6 0.0 1.8 1 1 0 2 2 2 1 TupA-like ATPgrasp CP_ATPgrasp_1 PF04174.8 gi|15668801|ref|NP_247604.1| - 0.12 11.0 0.0 6 5.3 0.0 2.2 2 0 0 2 2 2 0 A circularly permuted ATPgrasp HTH_3 PF01381.17 gi|15668802|ref|NP_247605.1| - 1.3e-07 31.3 0.1 2.7e-07 30.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|15668802|ref|NP_247605.1| - 6e-05 23.0 0.6 0.00011 22.1 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|15668802|ref|NP_247605.1| - 0.00048 20.2 0.0 0.0012 18.9 0.0 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain PrpR_N PF06506.6 gi|15668802|ref|NP_247605.1| - 0.0078 15.6 0.3 0.013 14.8 0.2 1.4 1 0 0 1 1 1 1 Propionate catabolism activator TrmB PF01978.14 gi|15668802|ref|NP_247605.1| - 0.018 14.7 0.0 0.043 13.5 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_psq PF05225.11 gi|15668802|ref|NP_247605.1| - 0.025 14.1 0.1 0.077 12.5 0.0 1.8 2 0 0 2 2 2 0 helix-turn-helix, Psq domain CTP-dep_RFKase PF01982.11 gi|15668802|ref|NP_247605.1| - 0.044 13.4 0.9 0.097 12.3 0.3 1.7 1 1 0 1 1 1 0 Domain of unknown function DUF120 HTH_17 PF12728.2 gi|15668802|ref|NP_247605.1| - 0.11 12.7 0.3 0.29 11.4 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Tubulin PF00091.20 gi|15668803|ref|NP_247606.1| - 1.1e-37 129.9 2.4 3.5e-37 128.3 1.7 1.7 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|15668803|ref|NP_247606.1| - 1.3e-37 127.7 3.5 6.4e-37 125.5 0.1 3.2 2 1 1 3 3 3 1 FtsZ family, C-terminal domain ThiF PF00899.16 gi|15668803|ref|NP_247606.1| - 0.0058 16.4 1.2 0.021 14.6 0.9 2.1 1 1 0 1 1 1 1 ThiF family TrkA_N PF02254.13 gi|15668803|ref|NP_247606.1| - 0.03 14.3 1.9 0.98 9.4 0.4 3.0 2 0 0 2 2 2 0 TrkA-N domain DUF4147 PF13660.1 gi|15668803|ref|NP_247606.1| - 0.48 9.4 4.4 0.076 12.1 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4147) Metallophos_2 PF12850.2 gi|15668804|ref|NP_247607.1| - 2e-32 112.1 0.0 2.5e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15668804|ref|NP_247607.1| - 1.5e-08 34.2 2.6 5e-06 26.0 1.8 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Antimicrobial_2 PF08023.7 gi|15668804|ref|NP_247607.1| - 0.11 12.8 0.4 0.22 11.8 0.3 1.4 1 0 0 1 1 1 0 Frog antimicrobial peptide 3Beta_HSD PF01073.14 gi|15668804|ref|NP_247607.1| - 0.12 11.0 0.1 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Fer4 PF00037.22 gi|15668805|ref|NP_247608.1| - 1.6e-16 59.0 16.4 2.2e-08 33.3 3.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15668805|ref|NP_247608.1| - 1.8e-10 40.9 26.0 3.5e-08 33.6 10.0 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668805|ref|NP_247608.1| - 7.7e-10 38.2 16.1 1.3e-05 24.8 3.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668805|ref|NP_247608.1| - 1.8e-09 36.9 13.9 4.3e-05 23.1 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668805|ref|NP_247608.1| - 3.8e-09 36.1 25.4 1.3e-06 28.0 9.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668805|ref|NP_247608.1| - 1.2e-08 35.0 10.8 6.8e-05 23.0 1.4 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668805|ref|NP_247608.1| - 4.4e-08 32.8 12.0 9e-05 22.5 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668805|ref|NP_247608.1| - 1e-07 31.6 12.5 4.1e-07 29.7 8.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668805|ref|NP_247608.1| - 1.8e-07 31.8 10.9 0.0015 19.2 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668805|ref|NP_247608.1| - 4.9e-05 23.2 13.2 0.0011 18.9 9.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668805|ref|NP_247608.1| - 5.8e-05 23.5 9.7 0.015 15.8 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15668805|ref|NP_247608.1| - 0.00013 22.2 15.9 0.006 16.9 3.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668805|ref|NP_247608.1| - 0.00037 20.8 12.4 0.1 13.0 0.5 2.5 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|15668805|ref|NP_247608.1| - 0.00041 20.6 13.6 0.051 13.9 1.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668805|ref|NP_247608.1| - 0.0023 18.3 18.4 0.046 14.3 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|15668805|ref|NP_247608.1| - 0.0035 17.1 5.3 0.005 16.7 3.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain RLI PF04068.10 gi|15668805|ref|NP_247608.1| - 0.018 14.6 9.2 0.027 14.0 1.1 3.0 1 1 1 2 2 2 0 Possible Fer4-like domain in RNase L inhibitor, RLI Barwin PF00967.12 gi|15668805|ref|NP_247608.1| - 0.14 11.8 2.8 0.16 11.6 2.0 1.0 1 0 0 1 1 1 0 Barwin family zf-ribbon_3 PF13248.1 gi|15668805|ref|NP_247608.1| - 0.26 10.5 0.2 0.26 10.5 0.1 3.7 3 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15668805|ref|NP_247608.1| - 0.87 9.1 0.2 0.87 9.1 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain DUF3079 PF11278.3 gi|15668805|ref|NP_247608.1| - 5.1 6.7 6.5 1.7 8.2 0.5 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3079) Arch_ATPase PF01637.13 gi|15668806|ref|NP_247609.1| - 1.3e-56 191.8 8.1 1.3e-56 191.8 5.6 2.0 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|15668806|ref|NP_247609.1| - 6.9e-10 39.1 0.0 1.7e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|15668806|ref|NP_247609.1| - 3.7e-08 33.5 0.0 2e-07 31.1 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|15668806|ref|NP_247609.1| - 6.1e-08 32.6 10.4 4.4e-06 26.6 0.1 3.5 2 1 2 4 4 4 2 AAA domain AAA PF00004.24 gi|15668806|ref|NP_247609.1| - 1.5e-06 28.4 0.1 1e-05 25.7 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RNA12 PF10443.4 gi|15668806|ref|NP_247609.1| - 1.4e-05 23.7 0.2 0.019 13.5 0.0 2.5 2 1 0 3 3 3 2 RNA12 protein MobB PF03205.9 gi|15668806|ref|NP_247609.1| - 0.002 17.8 0.0 0.0072 16.0 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.1 gi|15668806|ref|NP_247609.1| - 0.0033 18.2 2.5 0.048 14.4 1.8 2.6 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.17 gi|15668806|ref|NP_247609.1| - 0.011 15.8 0.0 0.053 13.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase DUF2075 PF09848.4 gi|15668806|ref|NP_247609.1| - 0.014 14.4 0.0 0.023 13.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_33 PF13671.1 gi|15668806|ref|NP_247609.1| - 0.033 14.0 0.0 0.074 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|15668806|ref|NP_247609.1| - 0.047 13.3 0.0 0.57 9.8 0.0 2.2 1 1 0 1 1 1 0 NACHT domain NTPase_1 PF03266.10 gi|15668806|ref|NP_247609.1| - 0.066 12.9 0.1 0.28 10.8 0.0 2.1 1 1 0 1 1 1 0 NTPase AAA_10 PF12846.2 gi|15668806|ref|NP_247609.1| - 0.074 12.4 0.0 1.5 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain T2SE PF00437.15 gi|15668806|ref|NP_247609.1| - 0.17 10.7 0.0 0.42 9.4 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_18 PF13238.1 gi|15668806|ref|NP_247609.1| - 0.7 10.2 7.5 0.16 12.2 0.1 2.8 2 2 0 2 2 2 0 AAA domain IMP_cyclohyd PF07826.6 gi|15668807|ref|NP_247610.1| - 1.9e-93 311.3 3.4 2.1e-93 311.2 2.4 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein Thymidylat_synt PF00303.14 gi|15668808|ref|NP_247611.1| - 0.0056 15.7 0.5 0.0076 15.2 0.4 1.3 1 0 0 1 1 1 1 Thymidylate synthase Rubis-subs-bind PF09273.6 gi|15668808|ref|NP_247611.1| - 0.043 13.7 0.0 0.051 13.4 0.0 1.2 1 0 0 1 1 1 0 Rubisco LSMT substrate-binding HEPN PF05168.9 gi|15668809|ref|NP_247612.1| - 0.00056 19.7 5.3 0.39 10.6 3.7 2.9 1 1 0 1 1 1 1 HEPN domain Pox_polyA_pol_N PF12630.2 gi|15668809|ref|NP_247612.1| - 0.58 10.2 6.5 0.14 12.2 0.7 2.4 1 1 1 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain PhoU_div PF01865.11 gi|15668810|ref|NP_247613.1| - 8.8e-62 208.0 16.4 9.9e-62 207.8 11.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 gi|15668810|ref|NP_247613.1| - 0.00047 20.5 14.7 0.0045 17.3 0.7 2.8 1 1 1 2 2 2 1 PhoU domain Sox_C_TAD PF12067.3 gi|15668810|ref|NP_247613.1| - 0.2 11.7 0.4 0.29 11.2 0.3 1.2 1 0 0 1 1 1 0 Sox C-terminal transactivation domain DUF4441 PF14536.1 gi|15668810|ref|NP_247613.1| - 2 8.4 7.9 0.37 10.7 1.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) PHO4 PF01384.15 gi|15668811|ref|NP_247614.1| - 5.5e-49 166.5 38.3 1.2e-48 165.4 26.5 1.6 1 1 0 1 1 1 1 Phosphate transporter family HycI PF01750.13 gi|15668812|ref|NP_247615.1| - 2.5e-30 104.7 1.6 2.5e-30 104.7 1.1 1.5 2 0 0 2 2 2 1 Hydrogenase maturation protease Arch_ATPase PF01637.13 gi|15668813|ref|NP_247616.1| - 2.6e-87 292.4 11.1 2.6e-87 292.4 7.7 2.0 1 1 1 2 2 2 1 Archaeal ATPase AAA_14 PF13173.1 gi|15668813|ref|NP_247616.1| - 5.2e-06 26.3 14.4 0.00013 21.8 0.5 3.3 1 1 2 3 3 3 2 AAA domain AAA_22 PF13401.1 gi|15668813|ref|NP_247616.1| - 1.6e-05 25.0 0.0 0.0008 19.5 0.0 3.1 1 1 2 3 3 3 1 AAA domain AAA_16 PF13191.1 gi|15668813|ref|NP_247616.1| - 4e-05 23.6 0.0 0.00014 21.8 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain DUF2348 PF09807.4 gi|15668813|ref|NP_247616.1| - 0.0026 16.9 0.9 0.41 9.7 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2348) Nit_Regul_Hom PF10126.4 gi|15668813|ref|NP_247616.1| - 0.0033 17.1 2.3 0.015 15.0 0.1 2.6 2 0 0 2 2 2 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII MobB PF03205.9 gi|15668813|ref|NP_247616.1| - 0.004 16.8 0.1 0.017 14.8 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B FTCD_C PF04961.7 gi|15668813|ref|NP_247616.1| - 0.006 16.0 1.0 0.017 14.5 0.9 1.5 2 0 0 2 2 2 1 Formiminotransferase-cyclodeaminase AAA PF00004.24 gi|15668813|ref|NP_247616.1| - 0.0095 16.1 0.0 0.33 11.1 0.0 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.14 gi|15668813|ref|NP_247616.1| - 0.039 13.3 0.0 0.13 11.6 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.2 gi|15668813|ref|NP_247616.1| - 0.071 12.5 0.2 0.61 9.4 0.0 2.4 3 0 0 3 3 3 0 AAA-like domain TrwB_AAD_bind PF10412.4 gi|15668813|ref|NP_247616.1| - 0.096 11.2 0.1 0.47 9.0 0.0 2.0 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain MMR_HSR1 PF01926.18 gi|15668813|ref|NP_247616.1| - 1.2 9.0 9.6 0.12 12.3 1.8 2.7 2 2 0 2 2 2 0 50S ribosome-binding GTPase tRNA-synt_1 PF00133.17 gi|15668814|ref|NP_247617.1| - 1.7e-69 234.4 0.5 1e-67 228.5 0.4 2.7 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|15668814|ref|NP_247617.1| - 2.3e-29 102.2 0.2 2e-10 39.8 0.0 3.6 2 1 1 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|15668814|ref|NP_247617.1| - 6.8e-26 90.8 0.5 6.8e-26 90.8 0.4 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 gi|15668814|ref|NP_247617.1| - 3.8e-12 45.8 0.7 7.9e-12 44.8 0.0 1.8 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|15668814|ref|NP_247617.1| - 0.0042 16.2 0.2 0.022 13.8 0.0 2.3 3 0 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain Radical_SAM PF04055.16 gi|15668815|ref|NP_247618.1| - 2.7e-10 40.6 0.5 5.2e-09 36.4 0.0 3.1 3 1 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15668815|ref|NP_247618.1| - 6e-06 26.2 0.0 1.6e-05 24.8 0.0 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|15668815|ref|NP_247618.1| - 0.0076 16.3 0.0 0.025 14.7 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF1971 PF09313.6 gi|15668816|ref|NP_247619.1| - 0.023 14.4 0.0 0.071 12.8 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1971) DUF3242 PF11586.3 gi|15668816|ref|NP_247619.1| - 0.14 11.6 5.3 0.46 10.0 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3242) Pyr_redox_2 PF07992.9 gi|15668817|ref|NP_247620.1| - 1.7e-25 90.1 0.2 2.2e-25 89.7 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|15668817|ref|NP_247620.1| - 3.4e-14 53.0 1.5 5.5e-10 39.5 0.0 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|15668817|ref|NP_247620.1| - 8.7e-09 35.2 0.1 0.011 15.3 0.0 3.0 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.1 gi|15668817|ref|NP_247620.1| - 1.1e-07 31.7 0.7 5.7e-07 29.4 0.0 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.1 gi|15668817|ref|NP_247620.1| - 2.5e-07 30.9 0.0 7.1e-07 29.4 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.18 gi|15668817|ref|NP_247620.1| - 1e-06 28.5 0.1 0.037 13.7 0.1 3.0 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_7 PF13241.1 gi|15668817|ref|NP_247620.1| - 1.4e-06 28.4 1.9 0.00038 20.6 0.0 3.2 3 1 0 3 3 3 1 Putative NAD(P)-binding GIDA PF01134.17 gi|15668817|ref|NP_247620.1| - 4.9e-06 25.6 0.0 0.0011 17.9 0.0 2.4 2 1 0 2 2 2 1 Glucose inhibited division protein A DAO PF01266.19 gi|15668817|ref|NP_247620.1| - 8.9e-06 24.8 0.3 6e-05 22.1 0.0 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase ApbA PF02558.11 gi|15668817|ref|NP_247620.1| - 2.3e-05 23.8 0.3 0.35 10.3 0.0 2.9 3 0 0 3 3 3 2 Ketopantoate reductase PanE/ApbA Thi4 PF01946.12 gi|15668817|ref|NP_247620.1| - 8.8e-05 21.7 0.1 0.00024 20.2 0.0 1.8 1 0 0 1 1 1 1 Thi4 family 2-Hacid_dh_C PF02826.14 gi|15668817|ref|NP_247620.1| - 0.00011 21.4 0.0 0.0058 15.8 0.0 2.3 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|15668817|ref|NP_247620.1| - 0.00025 20.2 0.1 0.0011 18.1 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.9 gi|15668817|ref|NP_247620.1| - 0.001 17.6 0.3 0.0029 16.1 0.0 1.9 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.19 gi|15668817|ref|NP_247620.1| - 0.003 16.4 0.1 0.012 14.5 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.16 gi|15668817|ref|NP_247620.1| - 0.0044 16.6 0.0 0.1 12.1 0.0 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.15 gi|15668817|ref|NP_247620.1| - 0.0048 16.9 0.7 6.8 6.8 0.0 3.1 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase IlvN PF07991.7 gi|15668817|ref|NP_247620.1| - 0.0071 15.7 0.0 0.68 9.2 0.0 2.5 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain XdhC_C PF13478.1 gi|15668817|ref|NP_247620.1| - 0.011 16.0 0.0 2.5 8.4 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain Trp_halogenase PF04820.9 gi|15668817|ref|NP_247620.1| - 0.027 13.0 0.1 0.074 11.6 0.0 1.8 2 0 0 2 2 2 0 Tryptophan halogenase NAD_binding_6 PF08030.7 gi|15668817|ref|NP_247620.1| - 0.057 13.3 0.4 0.86 9.4 0.0 2.3 2 0 0 2 2 2 0 Ferric reductase NAD binding domain Oxidored_nitro PF00148.14 gi|15668817|ref|NP_247620.1| - 0.064 11.8 0.0 0.18 10.3 0.0 1.8 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase TrkA_N PF02254.13 gi|15668817|ref|NP_247620.1| - 0.11 12.5 0.5 8.1 6.4 0.1 2.7 2 1 0 2 2 2 0 TrkA-N domain NAD_binding_9 PF13454.1 gi|15668817|ref|NP_247620.1| - 0.19 11.4 0.0 0.52 10.0 0.0 1.7 2 0 0 2 2 1 0 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|15668817|ref|NP_247620.1| - 0.21 10.9 4.5 0.33 10.3 0.0 2.7 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.2 gi|15668817|ref|NP_247620.1| - 0.23 10.4 0.0 0.32 10.0 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase DUF4163 PF13739.1 gi|15668817|ref|NP_247620.1| - 3 8.6 8.6 1.5 9.6 2.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4163) PDT PF00800.13 gi|15668818|ref|NP_247621.1| - 3.8e-58 196.0 0.0 4.8e-58 195.7 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|15668818|ref|NP_247621.1| - 6.3e-11 41.5 0.0 1.3e-10 40.5 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|15668818|ref|NP_247621.1| - 0.00012 22.2 0.0 0.00071 19.8 0.0 2.1 2 1 1 3 3 3 1 ACT domain UPF0158 PF03682.8 gi|15668818|ref|NP_247621.1| - 0.089 12.4 1.0 0.42 10.2 0.2 2.3 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0158) Methyltransf_11 PF08241.7 gi|15668819|ref|NP_247622.1| - 3.9e-18 65.7 0.0 7.5e-18 64.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15668819|ref|NP_247622.1| - 8.5e-14 51.5 0.1 1.4e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15668819|ref|NP_247622.1| - 2.4e-10 40.1 3.1 1.5e-09 37.6 1.1 2.3 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15668819|ref|NP_247622.1| - 1.3e-09 38.4 0.0 3.8e-09 36.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15668819|ref|NP_247622.1| - 2.3e-08 34.3 0.0 4.4e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|15668819|ref|NP_247622.1| - 3.9e-08 33.2 0.9 5.9e-08 32.6 0.4 1.4 1 1 1 2 2 2 1 Hypothetical methyltransferase DREV PF05219.7 gi|15668819|ref|NP_247622.1| - 2.9e-07 29.6 0.2 3.4e-07 29.3 0.1 1.2 1 0 0 1 1 1 1 DREV methyltransferase Ubie_methyltran PF01209.13 gi|15668819|ref|NP_247622.1| - 5e-07 29.0 0.3 8.6e-07 28.3 0.1 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|15668819|ref|NP_247622.1| - 0.00016 22.2 0.2 0.00093 19.7 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|15668819|ref|NP_247622.1| - 0.0039 16.3 0.0 0.0064 15.6 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|15668819|ref|NP_247622.1| - 0.013 14.8 0.6 0.28 10.5 0.4 2.3 1 1 0 1 1 1 0 Methyltransferase small domain AIRS PF00586.19 gi|15668821|ref|NP_247624.1| - 5.7e-18 64.9 1.5 9.2e-18 64.2 0.5 1.7 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|15668821|ref|NP_247624.1| - 8.9e-12 45.2 0.0 1.3e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain PGK PF00162.14 gi|15668822|ref|NP_247625.1| - 2.8e-130 434.3 2.0 3.2e-130 434.1 1.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Phage_HK97_TLTM PF06120.6 gi|15668822|ref|NP_247625.1| - 0.073 12.3 0.1 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Tail length tape measure protein FIVAR PF07554.8 gi|15668822|ref|NP_247625.1| - 0.22 11.8 1.5 7.1 6.9 0.1 3.3 3 0 0 3 3 3 0 Uncharacterised Sugar-binding Domain Peripla_BP_2 PF01497.13 gi|15668823|ref|NP_247626.1| - 2.8e-17 62.6 0.0 3.9e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein DUF386 PF04074.7 gi|15668823|ref|NP_247626.1| - 0.0073 15.8 1.1 0.017 14.6 0.8 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF386) ATG19_autophagy PF12744.2 gi|15668823|ref|NP_247626.1| - 0.38 9.9 2.9 7.8 5.6 0.2 2.2 2 0 0 2 2 2 0 Autophagy protein Atg19, Atg8-binding ALAD PF00490.16 gi|15668824|ref|NP_247627.1| - 3.6e-149 496.0 0.1 4.1e-149 495.8 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Methyltransf_6 PF03737.10 gi|15668825|ref|NP_247628.1| - 2.3e-51 173.7 0.7 2.8e-51 173.4 0.5 1.1 1 0 0 1 1 1 1 Demethylmenaquinone methyltransferase VIT1 PF01988.14 gi|15668826|ref|NP_247629.1| - 2.3e-30 105.6 21.1 2.4e-29 102.3 14.6 1.9 1 1 0 1 1 1 1 VIT family UPF0016 PF01169.14 gi|15668826|ref|NP_247629.1| - 0.19 11.8 9.5 1.6 8.9 2.4 2.5 2 0 0 2 2 2 0 Uncharacterized protein family UPF0016 IspA PF04279.10 gi|15668826|ref|NP_247629.1| - 0.22 11.4 5.0 0.36 10.7 3.4 1.3 1 0 0 1 1 1 0 Intracellular septation protein A DUF2115 PF09888.4 gi|15668827|ref|NP_247630.1| - 7.1e-55 185.5 9.0 7.9e-55 185.3 6.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) Rsbr_N PF08678.5 gi|15668827|ref|NP_247630.1| - 0.0016 18.3 0.4 0.014 15.2 0.1 2.2 3 0 0 3 3 3 1 Rsbr N terminal DUF3781 PF12636.2 gi|15668827|ref|NP_247630.1| - 0.0025 17.7 1.9 0.86 9.5 0.1 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF3781) SNF2_N PF00176.18 gi|15668827|ref|NP_247630.1| - 0.0065 15.2 1.1 0.0098 14.7 0.8 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Prefoldin_2 PF01920.15 gi|15668828|ref|NP_247631.1| - 1.1e-06 28.3 3.8 1.2e-06 28.1 2.6 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF4463 PF14703.1 gi|15668828|ref|NP_247631.1| - 0.0031 17.9 2.6 0.0039 17.6 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4463) SLX9 PF15341.1 gi|15668828|ref|NP_247631.1| - 0.0085 16.5 1.8 0.0085 16.5 1.2 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein SLX9 RE_SinI PF09570.5 gi|15668828|ref|NP_247631.1| - 0.014 14.3 0.6 0.015 14.3 0.4 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease Glyco_hydro_57 PF03065.10 gi|15668828|ref|NP_247631.1| - 0.023 13.6 0.1 0.023 13.6 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Prefoldin PF02996.12 gi|15668828|ref|NP_247631.1| - 0.025 14.2 8.2 0.048 13.3 0.1 2.1 1 1 1 2 2 2 0 Prefoldin subunit Sec6 PF06046.8 gi|15668828|ref|NP_247631.1| - 0.031 12.3 0.4 0.029 12.4 0.3 1.1 1 0 0 1 1 1 0 Exocyst complex component Sec6 DUF3781 PF12636.2 gi|15668828|ref|NP_247631.1| - 0.054 13.4 2.5 5.3 7.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3781) Xpo1 PF08389.7 gi|15668828|ref|NP_247631.1| - 0.059 13.2 0.8 0.068 13.0 0.5 1.4 1 1 0 1 1 1 0 Exportin 1-like protein DUF544 PF04424.8 gi|15668828|ref|NP_247631.1| - 0.07 12.9 0.2 0.074 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF544) F1F0-ATPsyn_F PF10791.4 gi|15668828|ref|NP_247631.1| - 0.089 13.0 0.0 0.096 12.9 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi Cas_DxTHG PF09455.5 gi|15668828|ref|NP_247631.1| - 0.11 11.6 4.1 0.11 11.6 2.8 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family Cas_Csd1 PF09709.5 gi|15668828|ref|NP_247631.1| - 0.13 10.5 1.1 0.15 10.3 0.7 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csd1) SR-25 PF10500.4 gi|15668828|ref|NP_247631.1| - 0.28 10.6 2.9 0.26 10.7 2.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Prefoldin PF02996.12 gi|15668829|ref|NP_247632.1| - 8.8e-28 96.3 6.1 1.1e-27 96.0 4.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit DUF3373 PF11853.3 gi|15668829|ref|NP_247632.1| - 0.075 11.5 1.3 0.17 10.3 0.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3373) Med9 PF07544.8 gi|15668829|ref|NP_247632.1| - 0.13 12.0 2.7 0.21 11.3 0.0 2.5 2 1 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 PEP-utilisers_N PF05524.8 gi|15668829|ref|NP_247632.1| - 0.15 11.8 5.4 1.6 8.5 0.2 2.5 1 1 1 2 2 2 0 PEP-utilising enzyme, N-terminal Seryl_tRNA_N PF02403.17 gi|15668829|ref|NP_247632.1| - 0.15 12.0 12.5 1.1 9.2 0.0 2.4 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain NPV_P10 PF05531.7 gi|15668829|ref|NP_247632.1| - 0.16 12.2 3.4 10 6.4 1.4 2.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Ax_dynein_light PF10211.4 gi|15668829|ref|NP_247632.1| - 0.18 11.6 8.7 0.71 9.6 5.1 2.0 2 0 0 2 2 2 0 Axonemal dynein light chain TMF_TATA_bd PF12325.3 gi|15668829|ref|NP_247632.1| - 0.2 11.4 11.3 1.1 8.9 0.1 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Reo_sigmaC PF04582.7 gi|15668829|ref|NP_247632.1| - 0.21 10.7 0.6 2.1 7.4 0.1 1.9 1 1 1 2 2 2 0 Reovirus sigma C capsid protein Syntaxin PF00804.20 gi|15668829|ref|NP_247632.1| - 0.21 11.7 6.3 2.1 8.5 2.7 2.2 2 0 0 2 2 2 0 Syntaxin DUF948 PF06103.6 gi|15668829|ref|NP_247632.1| - 0.24 11.2 4.5 8.7 6.2 0.1 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.4 gi|15668829|ref|NP_247632.1| - 0.25 11.4 10.2 6.1 7.0 0.0 3.5 1 1 3 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF972 PF06156.8 gi|15668829|ref|NP_247632.1| - 0.28 11.5 10.3 14 6.0 3.1 3.0 1 1 1 3 3 3 0 Protein of unknown function (DUF972) DUF2076 PF09849.4 gi|15668829|ref|NP_247632.1| - 0.43 10.5 6.0 0.24 11.4 2.4 1.8 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2076) TMF_DNA_bd PF12329.3 gi|15668829|ref|NP_247632.1| - 0.53 10.1 13.2 1.7 8.4 0.0 2.9 2 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc24 PF08286.6 gi|15668829|ref|NP_247632.1| - 0.54 9.9 8.2 14 5.4 0.0 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 MerR-DNA-bind PF09278.6 gi|15668829|ref|NP_247632.1| - 0.59 10.5 5.5 4.6 7.6 0.1 2.8 2 1 0 2 2 2 0 MerR, DNA binding DivIC PF04977.10 gi|15668829|ref|NP_247632.1| - 0.62 9.5 0.1 0.62 9.5 0.0 3.0 2 1 1 3 3 3 0 Septum formation initiator Fib_alpha PF08702.5 gi|15668829|ref|NP_247632.1| - 0.65 10.1 5.0 11 6.1 1.4 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Snapin_Pallidin PF14712.1 gi|15668829|ref|NP_247632.1| - 0.68 10.2 5.7 15 5.9 1.7 2.4 2 1 0 2 2 2 0 Snapin/Pallidin IncA PF04156.9 gi|15668829|ref|NP_247632.1| - 0.69 9.4 10.8 53 3.3 7.5 2.1 1 1 0 1 1 1 0 IncA protein Atg14 PF10186.4 gi|15668829|ref|NP_247632.1| - 3 6.7 6.8 2.1 7.2 0.0 2.0 1 1 0 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 DUF4140 PF13600.1 gi|15668829|ref|NP_247632.1| - 4.5 7.7 11.1 2.6 8.5 0.1 2.9 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Pyr_redox_2 PF07992.9 gi|15668830|ref|NP_247633.1| - 8.9e-41 139.9 7.0 2.9e-39 135.0 4.9 3.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|15668830|ref|NP_247633.1| - 1.4e-26 92.7 3.7 6.9e-20 71.2 0.1 3.5 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|15668830|ref|NP_247633.1| - 1.1e-15 57.6 0.2 9.9e-15 54.5 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.1 gi|15668830|ref|NP_247633.1| - 1e-13 51.8 0.7 0.031 14.3 0.0 4.1 4 0 0 4 4 4 4 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|15668830|ref|NP_247633.1| - 4.5e-13 48.8 3.0 3.2e-05 22.9 0.5 4.1 4 0 0 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|15668830|ref|NP_247633.1| - 2.8e-10 39.6 1.2 0.0012 17.8 0.0 4.0 4 0 0 4 4 4 2 FAD binding domain HI0933_like PF03486.9 gi|15668830|ref|NP_247633.1| - 3.6e-10 38.8 1.2 0.031 12.7 0.1 4.3 4 0 0 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.1 gi|15668830|ref|NP_247633.1| - 2.2e-09 37.2 0.6 0.0016 18.4 0.0 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.1 gi|15668830|ref|NP_247633.1| - 5.3e-06 26.6 5.0 0.012 15.8 0.0 3.3 2 1 1 3 3 3 2 Putative NAD(P)-binding GIDA PF01134.17 gi|15668830|ref|NP_247633.1| - 6e-06 25.3 2.8 2.1 7.1 0.1 4.3 4 0 0 4 4 4 2 Glucose inhibited division protein A Lycopene_cycl PF05834.7 gi|15668830|ref|NP_247633.1| - 9.7e-06 24.7 0.6 0.063 12.1 0.0 2.5 3 0 0 3 3 3 2 Lycopene cyclase protein Thi4 PF01946.12 gi|15668830|ref|NP_247633.1| - 1.4e-05 24.3 5.3 0.039 13.0 0.1 3.4 4 0 0 4 4 4 2 Thi4 family K_oxygenase PF13434.1 gi|15668830|ref|NP_247633.1| - 1.5e-05 24.0 0.0 0.00058 18.8 0.0 2.7 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.1 gi|15668830|ref|NP_247633.1| - 3.9e-05 23.4 1.9 1 9.1 0.0 4.0 3 1 1 4 4 4 1 FAD-NAD(P)-binding TrkA_N PF02254.13 gi|15668830|ref|NP_247633.1| - 4.2e-05 23.5 0.8 0.33 10.9 0.0 3.0 2 1 0 2 2 2 2 TrkA-N domain 3HCDH_N PF02737.13 gi|15668830|ref|NP_247633.1| - 5.6e-05 22.8 0.4 0.00021 20.9 0.1 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|15668830|ref|NP_247633.1| - 9e-05 21.6 0.6 0.18 10.8 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|15668830|ref|NP_247633.1| - 0.00024 20.5 0.2 0.022 14.1 0.0 2.6 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|15668830|ref|NP_247633.1| - 0.00044 19.4 0.3 0.1 11.7 0.1 2.7 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Response_reg PF00072.19 gi|15668830|ref|NP_247633.1| - 0.00053 19.9 0.1 1 9.4 0.0 3.3 3 0 0 3 3 3 1 Response regulator receiver domain Amino_oxidase PF01593.19 gi|15668830|ref|NP_247633.1| - 0.00077 18.6 0.3 0.041 12.9 0.0 2.5 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase IlvN PF07991.7 gi|15668830|ref|NP_247633.1| - 0.0011 18.3 0.1 0.49 9.7 0.0 2.4 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain Trp_halogenase PF04820.9 gi|15668830|ref|NP_247633.1| - 0.0052 15.4 2.1 0.17 10.4 0.0 2.6 3 0 0 3 3 3 1 Tryptophan halogenase ApbA PF02558.11 gi|15668830|ref|NP_247633.1| - 0.0058 16.0 0.0 0.36 10.2 0.0 2.5 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|15668830|ref|NP_247633.1| - 0.017 15.0 0.2 0.047 13.5 0.0 1.9 2 0 0 2 2 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase DUF1188 PF06690.6 gi|15668830|ref|NP_247633.1| - 0.019 14.1 0.5 0.25 10.4 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1188) GFO_IDH_MocA PF01408.17 gi|15668830|ref|NP_247633.1| - 0.02 15.3 0.1 11 6.5 0.0 2.7 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_Gly3P_dh_N PF01210.18 gi|15668830|ref|NP_247633.1| - 0.06 13.0 0.0 3.3 7.4 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|15668830|ref|NP_247633.1| - 0.096 12.6 0.0 0.79 9.7 0.0 2.5 1 1 1 2 2 2 0 NADH(P)-binding PepSY_2 PF13670.1 gi|15668830|ref|NP_247633.1| - 0.32 10.9 5.5 0.82 9.6 0.1 3.2 3 1 0 3 3 2 0 Peptidase propeptide and YPEB domain Shikimate_DH PF01488.15 gi|15668830|ref|NP_247633.1| - 1 9.4 6.3 4.9 7.2 0.2 3.6 3 2 1 4 4 4 0 Shikimate / quinate 5-dehydrogenase Peptidase_S49 PF01343.13 gi|15668832|ref|NP_247635.1| - 2.6e-59 199.4 0.3 3.3e-59 199.0 0.2 1.1 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.18 gi|15668832|ref|NP_247635.1| - 4.8e-09 36.1 0.1 2.3e-05 24.1 0.0 2.4 1 1 0 2 2 2 2 Clp protease ECH PF00378.15 gi|15668832|ref|NP_247635.1| - 3.8e-05 22.9 0.3 0.078 12.0 0.0 2.6 2 1 0 2 2 2 2 Enoyl-CoA hydratase/isomerase family SDH_sah PF01972.11 gi|15668832|ref|NP_247635.1| - 0.00018 20.3 0.1 0.00034 19.5 0.0 1.4 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Succ_CoA_lig PF13607.1 gi|15668832|ref|NP_247635.1| - 0.0054 16.3 0.0 0.0093 15.5 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Ligase_CoA PF00549.14 gi|15668832|ref|NP_247635.1| - 0.022 14.3 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 CoA-ligase RRF PF01765.14 gi|15668832|ref|NP_247635.1| - 0.05 13.0 0.1 0.15 11.5 0.0 1.7 1 1 0 1 1 1 0 Ribosome recycling factor Radical_SAM PF04055.16 gi|15668832|ref|NP_247635.1| - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Radical SAM superfamily CRS1_YhbY PF01985.16 gi|15668833|ref|NP_247636.1| - 4.3e-24 84.3 2.1 6.8e-24 83.6 1.4 1.3 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Toprim PF01751.17 gi|15668833|ref|NP_247636.1| - 0.11 12.5 0.7 0.21 11.5 0.1 1.7 2 0 0 2 2 2 0 Toprim domain Cas_Cas2CT1978 PF09707.5 gi|15668833|ref|NP_247636.1| - 0.12 12.3 0.2 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Pilus_CpaD PF09476.5 gi|15668833|ref|NP_247636.1| - 0.14 11.6 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) CBS PF00571.23 gi|15668834|ref|NP_247637.1| - 5.2e-34 115.7 3.1 2.5e-17 62.3 0.1 2.2 2 0 0 2 2 2 2 CBS domain UvrC_HhH_N PF08459.6 gi|15668834|ref|NP_247637.1| - 0.016 14.7 0.1 0.036 13.6 0.0 1.5 1 0 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal RESP18 PF14948.1 gi|15668834|ref|NP_247637.1| - 0.099 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 RESP18 domain OrfB_Zn_ribbon PF07282.6 gi|15668834|ref|NP_247637.1| - 0.11 12.1 0.2 0.21 11.2 0.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain PhnA_Zn_Ribbon PF08274.7 gi|15668834|ref|NP_247637.1| - 0.23 11.3 2.9 11 5.8 0.1 2.3 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-C4_ClpX PF06689.8 gi|15668834|ref|NP_247637.1| - 2.7 7.5 6.8 0.58 9.7 0.1 2.8 3 0 0 3 3 3 0 ClpX C4-type zinc finger DHO_dh PF01180.16 gi|15668835|ref|NP_247638.1| - 1.4e-98 329.4 3.3 1.6e-98 329.2 2.3 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|15668835|ref|NP_247638.1| - 1e-14 54.1 0.9 4e-11 42.3 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|15668835|ref|NP_247638.1| - 5e-05 22.6 4.9 0.00021 20.5 3.4 2.2 1 1 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.16 gi|15668835|ref|NP_247638.1| - 0.0026 17.0 0.5 0.041 13.1 0.0 2.6 2 1 0 2 2 2 1 Histidine biosynthesis protein Radical_SAM PF04055.16 gi|15668835|ref|NP_247638.1| - 0.0094 16.1 0.0 0.98 9.5 0.0 2.3 1 1 1 2 2 2 2 Radical SAM superfamily FMN_dh PF01070.13 gi|15668835|ref|NP_247638.1| - 0.013 14.3 3.8 0.11 11.3 1.9 2.6 2 1 0 2 2 2 0 FMN-dependent dehydrogenase PcrB PF01884.12 gi|15668835|ref|NP_247638.1| - 0.049 12.8 6.1 0.072 12.3 0.3 2.6 3 0 0 3 3 3 0 PcrB family PapG_C PF03628.8 gi|15668835|ref|NP_247638.1| - 0.13 11.8 0.3 0.6 9.8 0.1 1.9 1 1 0 2 2 2 0 PapG chaperone-binding domain ThiG PF05690.9 gi|15668835|ref|NP_247638.1| - 0.15 11.1 2.7 0.36 9.8 1.9 1.6 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG IMPDH PF00478.20 gi|15668835|ref|NP_247638.1| - 0.95 8.2 4.1 0.43 9.3 0.7 1.8 2 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Ribosomal_L34e PF01199.13 gi|15668836|ref|NP_247639.1| - 6.3e-33 112.8 7.4 6.9e-33 112.7 5.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e DUF4428 PF14471.1 gi|15668836|ref|NP_247639.1| - 0.0042 16.8 1.5 0.44 10.3 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4428) DUF2197 PF09963.4 gi|15668836|ref|NP_247639.1| - 0.086 12.8 2.5 0.19 11.6 0.2 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) zf-FPG_IleRS PF06827.9 gi|15668836|ref|NP_247639.1| - 0.14 11.8 2.8 0.23 11.1 0.3 2.2 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-HIT PF04438.11 gi|15668836|ref|NP_247639.1| - 0.49 10.0 3.7 9 6.0 0.3 2.3 2 0 0 2 2 2 0 HIT zinc finger Zn_ribbon_recom PF13408.1 gi|15668836|ref|NP_247639.1| - 7.4 6.9 7.6 0.45 10.8 0.6 2.2 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain Cytidylate_kin2 PF13189.1 gi|15668837|ref|NP_247640.1| - 3.4e-29 102.0 1.9 1.7e-28 99.7 1.3 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|15668837|ref|NP_247640.1| - 1.7e-16 60.7 0.8 2.4e-16 60.2 0.5 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15668837|ref|NP_247640.1| - 1.6e-13 51.5 1.0 2e-12 48.0 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|15668837|ref|NP_247640.1| - 2e-07 31.0 0.0 2.8e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.17 gi|15668837|ref|NP_247640.1| - 2.9e-07 30.4 0.5 1e-05 25.4 0.4 2.2 1 1 0 1 1 1 1 Adenylate kinase Cytidylate_kin PF02224.13 gi|15668837|ref|NP_247640.1| - 6.7e-07 28.8 0.3 9.1e-07 28.4 0.2 1.2 1 0 0 1 1 1 1 Cytidylate kinase SKI PF01202.17 gi|15668837|ref|NP_247640.1| - 1.5e-06 28.1 0.1 2e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 Shikimate kinase dNK PF01712.14 gi|15668837|ref|NP_247640.1| - 9.1e-06 25.6 2.5 0.0008 19.3 1.7 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase Thymidylate_kin PF02223.12 gi|15668837|ref|NP_247640.1| - 4.3e-05 22.9 1.6 0.0052 16.1 0.1 2.3 1 1 0 2 2 2 2 Thymidylate kinase AAA PF00004.24 gi|15668837|ref|NP_247640.1| - 0.00091 19.4 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.1 gi|15668837|ref|NP_247640.1| - 0.016 14.9 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain CoaE PF01121.15 gi|15668837|ref|NP_247640.1| - 0.02 14.2 0.6 3.9 6.8 0.0 2.1 1 1 1 2 2 2 0 Dephospho-CoA kinase AAA_28 PF13521.1 gi|15668837|ref|NP_247640.1| - 0.025 14.5 0.2 0.046 13.6 0.1 1.4 1 1 0 1 1 1 0 AAA domain CCDC50_N PF15295.1 gi|15668837|ref|NP_247640.1| - 1.8 8.4 7.3 2.6 7.9 0.7 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 50 N-terminus KOW PF00467.24 gi|15668838|ref|NP_247641.1| - 2.8e-05 23.6 2.2 4.9e-05 22.8 1.5 1.4 1 0 0 1 1 1 1 KOW motif Ribosomal_L14e PF01929.12 gi|15668838|ref|NP_247641.1| - 3.7e-05 23.9 0.0 5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 GXGXG PF01493.14 gi|15668839|ref|NP_247642.1| - 7.5e-30 103.4 17.3 9.9e-21 73.6 9.4 3.5 1 1 1 2 2 2 2 GXGXG motif TPR_19 PF14559.1 gi|15668840|ref|NP_247643.1| - 1.4e-05 25.3 1.4 0.042 14.2 0.0 3.0 1 1 1 3 3 3 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|15668840|ref|NP_247643.1| - 5.2e-05 23.2 0.2 7.6e-05 22.7 0.1 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 PPR PF01535.15 gi|15668840|ref|NP_247643.1| - 0.0019 18.0 2.3 1.1 9.4 0.0 4.2 4 0 0 4 4 4 1 PPR repeat TPR_2 PF07719.12 gi|15668840|ref|NP_247643.1| - 0.0035 17.1 0.4 2 8.5 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15668840|ref|NP_247643.1| - 0.0061 17.0 0.0 0.19 12.4 0.0 2.8 1 1 2 3 3 3 1 Tetratricopeptide repeat ATP13 PF12921.2 gi|15668840|ref|NP_247643.1| - 0.0071 15.7 0.1 0.025 13.9 0.0 1.9 1 1 1 2 2 2 1 Mitochondrial ATPase expression PPR_2 PF13041.1 gi|15668840|ref|NP_247643.1| - 0.02 14.8 0.6 33 4.5 0.0 3.9 4 0 0 4 4 4 0 PPR repeat family Clathrin PF00637.15 gi|15668840|ref|NP_247643.1| - 0.022 14.3 1.1 0.022 14.3 0.8 2.2 1 1 2 3 3 3 0 Region in Clathrin and VPS SgrR_N PF12793.2 gi|15668840|ref|NP_247643.1| - 0.037 14.0 2.6 4.9 7.1 0.0 3.4 1 1 3 4 4 4 0 Sugar transport-related sRNA regulator N-term TPR_10 PF13374.1 gi|15668840|ref|NP_247643.1| - 0.09 12.7 0.0 6.2 6.8 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat YfdX PF10938.3 gi|15668840|ref|NP_247643.1| - 0.13 11.8 6.3 0.12 12.0 2.0 2.1 1 1 1 2 2 2 0 YfdX protein CLTH PF10607.4 gi|15668840|ref|NP_247643.1| - 0.16 11.6 4.5 3.4 7.3 3.0 2.7 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain DUF4213 PF13938.1 gi|15668840|ref|NP_247643.1| - 0.17 12.0 0.6 0.37 10.9 0.1 1.9 2 2 0 2 2 2 0 Domain of unknown function (DUF4213) Erp_C PF06780.6 gi|15668840|ref|NP_247643.1| - 0.2 11.4 8.3 0.062 13.1 2.3 2.1 1 1 0 2 2 2 0 Erp protein C-terminus TPR_8 PF13181.1 gi|15668840|ref|NP_247643.1| - 0.25 11.2 3.2 4.6 7.2 0.0 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat SPOB_a PF14689.1 gi|15668840|ref|NP_247643.1| - 0.43 10.1 9.6 4.1 7.0 0.1 3.8 2 2 2 4 4 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain Ribosomal_L36e PF01158.13 gi|15668840|ref|NP_247643.1| - 6.3 6.8 7.6 6.6 6.7 1.6 2.2 1 1 0 2 2 2 0 Ribosomal protein L36e TRAM PF01938.15 gi|15668841|ref|NP_247644.1| - 2e-17 62.7 2.0 2.5e-17 62.4 1.4 1.1 1 0 0 1 1 1 1 TRAM domain CxxCxxCC PF03692.10 gi|15668842|ref|NP_247645.1| - 1.6e-18 66.9 1.4 2.4e-18 66.3 1.0 1.3 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain PAP2 PF01569.16 gi|15668843|ref|NP_247646.1| - 4.1e-10 39.4 9.4 4.1e-10 39.4 6.5 2.8 3 1 0 3 3 3 1 PAP2 superfamily PAP2_3 PF14378.1 gi|15668843|ref|NP_247646.1| - 3.7e-07 29.8 3.3 5.4e-07 29.3 2.3 1.5 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.1 gi|15668843|ref|NP_247646.1| - 0.023 14.9 1.5 0.023 14.9 1.0 2.2 2 1 0 2 2 2 0 PAP2 superfamily C-terminal TPP_enzyme_N PF02776.13 gi|15668844|ref|NP_247647.1| - 3e-38 130.9 0.0 4.3e-38 130.4 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|15668844|ref|NP_247647.1| - 9.8e-27 93.4 0.4 3.7e-23 81.7 0.1 3.2 2 1 0 2 2 2 2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|15668844|ref|NP_247647.1| - 1.3e-06 28.1 0.0 2.8e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain zf-C4_Topoisom PF01396.14 gi|15668845|ref|NP_247648.1| - 8.1e-15 54.0 3.9 1.7e-14 52.9 2.7 1.6 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.1 gi|15668845|ref|NP_247648.1| - 0.032 13.4 0.0 0.078 12.2 0.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-CCCH_2 PF14608.1 gi|15668845|ref|NP_247648.1| - 0.099 12.6 1.1 0.19 11.8 0.7 1.4 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type DUF354 PF04007.7 gi|15668846|ref|NP_247649.1| - 1.8e-161 536.6 2.0 2e-161 536.4 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.14 gi|15668846|ref|NP_247649.1| - 0.00051 18.9 0.0 0.00076 18.3 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase LpxB PF02684.10 gi|15668846|ref|NP_247649.1| - 0.033 12.8 0.0 0.058 12.0 0.0 1.3 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase MoeA_N PF03453.12 gi|15668847|ref|NP_247650.1| - 1.5e-46 157.7 0.0 2.3e-46 157.0 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|15668847|ref|NP_247650.1| - 9.6e-37 125.5 0.5 1.2e-35 122.0 0.0 2.1 2 0 0 2 2 2 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|15668847|ref|NP_247650.1| - 1.5e-19 69.6 0.0 6.7e-19 67.6 0.0 2.1 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) 7TMR-HDED PF07697.6 gi|15668847|ref|NP_247650.1| - 0.00066 19.4 0.4 0.012 15.3 0.0 2.5 3 0 0 3 3 3 1 7TM-HD extracellular DHHW PF14286.1 gi|15668847|ref|NP_247650.1| - 0.085 12.1 0.8 0.37 10.0 0.1 2.0 1 1 1 2 2 2 0 DHHW protein PYNP_C PF07831.8 gi|15668848|ref|NP_247651.1| - 5.6e-19 67.3 1.2 1.1e-17 63.1 0.2 2.7 2 0 0 2 2 2 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.16 gi|15668848|ref|NP_247651.1| - 1.2e-15 57.6 0.4 2.9e-15 56.3 0.1 1.8 2 1 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|15668848|ref|NP_247651.1| - 1.5e-15 56.4 0.3 4.9e-15 54.8 0.1 2.0 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain Biotin_lipoyl_2 PF13533.1 gi|15668848|ref|NP_247651.1| - 1.5e-05 24.5 0.7 7.9e-05 22.2 0.0 2.3 2 0 0 2 2 2 1 Biotin-lipoyl like DUF2254 PF10011.4 gi|15668848|ref|NP_247651.1| - 0.0012 17.3 0.0 0.0019 16.7 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) CDC48_N PF02359.13 gi|15668848|ref|NP_247651.1| - 0.0015 18.4 0.0 0.0041 17.0 0.0 1.8 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain Biotin_lipoyl PF00364.17 gi|15668848|ref|NP_247651.1| - 0.0048 16.5 4.5 1.1 8.8 0.0 3.5 2 1 0 3 3 3 2 Biotin-requiring enzyme HlyD_2 PF12700.2 gi|15668848|ref|NP_247651.1| - 0.005 16.0 2.8 0.018 14.2 0.4 2.4 2 1 0 2 2 2 1 HlyD family secretion protein DUF684 PF05075.9 gi|15668848|ref|NP_247651.1| - 0.0052 15.4 0.1 0.0078 14.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF684) Antitoxin-MazE PF04014.13 gi|15668848|ref|NP_247651.1| - 0.058 13.1 0.4 0.25 11.1 0.1 2.2 2 0 0 2 2 2 0 Antidote-toxin recognition MazE DUF3796 PF12676.2 gi|15668849|ref|NP_247652.1| - 0.043 14.0 1.1 0.047 13.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) SRX PF09201.5 gi|15668849|ref|NP_247652.1| - 0.094 12.3 0.6 0.16 11.6 0.4 1.6 1 1 0 1 1 1 0 SRX DUF2312 PF10073.4 gi|15668849|ref|NP_247652.1| - 0.13 11.6 1.7 0.19 11.1 1.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) DEAD PF00270.24 gi|15668850|ref|NP_247653.1| - 1.3e-47 161.4 0.1 3.4e-46 156.8 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15668850|ref|NP_247653.1| - 1.8e-29 101.4 1.1 4.6e-29 100.0 0.1 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|15668850|ref|NP_247653.1| - 8.3e-08 32.2 0.1 1.7e-07 31.2 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.1 gi|15668850|ref|NP_247653.1| - 7.8e-07 28.4 0.0 1.6e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Helicase_C_2 PF13307.1 gi|15668850|ref|NP_247653.1| - 0.0029 17.5 0.0 0.006 16.5 0.0 1.6 1 0 0 1 1 1 1 Helicase C-terminal domain AAA_30 PF13604.1 gi|15668850|ref|NP_247653.1| - 0.0085 15.6 0.0 0.022 14.3 0.0 1.7 2 1 0 2 2 2 1 AAA domain Flavi_DEAD PF07652.9 gi|15668850|ref|NP_247653.1| - 0.084 12.6 0.0 0.19 11.5 0.0 1.8 1 1 0 1 1 1 0 Flavivirus DEAD domain AAA_22 PF13401.1 gi|15668850|ref|NP_247653.1| - 0.51 10.4 2.5 3.2 7.9 0.8 2.9 2 1 0 2 2 2 0 AAA domain Methyltransf_30 PF05430.6 gi|15668851|ref|NP_247654.1| - 6.1e-37 126.0 0.0 1.2e-36 125.0 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_18 PF12847.2 gi|15668851|ref|NP_247654.1| - 9.9e-07 29.3 0.0 6.2e-06 26.7 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15668851|ref|NP_247654.1| - 1.5e-05 24.9 0.0 2.5e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15668851|ref|NP_247654.1| - 0.00041 19.9 0.6 0.7 9.4 0.0 2.7 2 1 0 2 2 2 2 Methyltransferase domain MTS PF05175.9 gi|15668851|ref|NP_247654.1| - 0.014 14.7 0.0 0.033 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.1 gi|15668851|ref|NP_247654.1| - 0.03 14.6 0.0 0.065 13.6 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain RibD_C PF01872.12 gi|15668852|ref|NP_247655.1| - 4.7e-67 225.4 0.1 5.3e-67 225.3 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Takusan PF04822.8 gi|15668852|ref|NP_247655.1| - 0.028 14.1 0.3 0.49 10.1 0.1 2.4 2 1 1 3 3 3 0 Takusan Aldolase PF01081.14 gi|15668852|ref|NP_247655.1| - 0.049 12.7 0.3 0.11 11.6 0.0 1.7 2 0 0 2 2 2 0 KDPG and KHG aldolase Na_sulph_symp PF00939.14 gi|15668853|ref|NP_247656.1| - 2.9e-45 155.0 36.8 4.3e-45 154.4 25.5 1.2 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.11 gi|15668853|ref|NP_247656.1| - 1.2e-22 80.0 40.2 1.4e-21 76.4 23.3 2.4 1 1 2 3 3 3 2 Citrate transporter Ribosomal_S8e PF01201.17 gi|15668854|ref|NP_247657.1| - 2.6e-43 147.3 4.3 2.9e-43 147.1 3.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Radical_SAM PF04055.16 gi|15668855|ref|NP_247658.1| - 2.4e-12 47.3 0.8 2.4e-12 47.3 0.5 2.6 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15668855|ref|NP_247658.1| - 1.3e-08 34.9 0.1 1.3e-08 34.9 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|15668855|ref|NP_247658.1| - 4.1e-08 33.4 0.3 1.1e-07 32.0 0.2 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Rad21_Rec8_N PF04825.8 gi|15668855|ref|NP_247658.1| - 0.03 14.2 0.0 0.058 13.3 0.0 1.5 1 0 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein DUF43 PF01861.11 gi|15668856|ref|NP_247659.1| - 1.1e-103 345.4 0.1 1.5e-103 344.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF43 Cons_hypoth95 PF03602.10 gi|15668856|ref|NP_247659.1| - 6.2e-06 25.7 0.0 1.1e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.1 gi|15668856|ref|NP_247659.1| - 1.7e-05 24.4 0.1 4.3e-05 23.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15668856|ref|NP_247659.1| - 0.00014 21.8 0.0 0.00021 21.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain N6-adenineMlase PF10237.4 gi|15668856|ref|NP_247659.1| - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase Methyltransf_25 PF13649.1 gi|15668856|ref|NP_247659.1| - 0.0083 16.4 0.0 0.016 15.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MarR PF01047.17 gi|15668856|ref|NP_247659.1| - 0.011 15.3 0.2 0.03 14.0 0.2 1.7 1 0 0 1 1 1 0 MarR family RPA_C PF08784.6 gi|15668856|ref|NP_247659.1| - 0.052 13.9 0.1 0.96 9.8 0.0 2.3 2 0 0 2 2 2 0 Replication protein A C terminal Rad60-SLD PF11976.3 gi|15668856|ref|NP_247659.1| - 0.11 12.2 0.9 17 5.1 0.1 2.6 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like Zn-ribbon_8 PF09723.5 gi|15668856|ref|NP_247659.1| - 0.13 12.2 3.5 0.63 10.0 1.3 2.3 2 0 0 2 2 2 0 Zinc ribbon domain FUR PF01475.14 gi|15668856|ref|NP_247659.1| - 0.49 10.3 3.2 1.1 9.1 0.1 2.5 3 0 0 3 3 3 0 Ferric uptake regulator family DUF2072 PF09845.4 gi|15668856|ref|NP_247659.1| - 0.8 9.6 7.1 0.23 11.3 2.6 1.9 2 0 0 2 2 2 0 Zn-ribbon containing protein (DUF2072) A2L_zn_ribbon PF08792.5 gi|15668856|ref|NP_247659.1| - 5.1 6.6 6.7 19 4.8 0.1 3.0 3 0 0 3 3 3 0 A2L zinc ribbon domain AIRS_C PF02769.17 gi|15668857|ref|NP_247660.1| - 2.3e-33 115.3 0.7 3.8e-33 114.6 0.5 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|15668857|ref|NP_247660.1| - 1.4e-16 60.4 0.0 3.4e-16 59.2 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain SOR_SNZ PF01680.12 gi|15668858|ref|NP_247661.1| - 2.9e-112 373.3 7.8 1.9e-109 364.0 4.9 2.5 2 1 1 3 3 3 2 SOR/SNZ family ThiG PF05690.9 gi|15668858|ref|NP_247661.1| - 1.7e-08 33.8 5.9 2.4e-05 23.5 0.0 2.8 2 1 0 3 3 3 2 Thiazole biosynthesis protein ThiG NanE PF04131.9 gi|15668858|ref|NP_247661.1| - 0.00039 19.4 1.0 0.15 10.9 0.0 2.5 2 1 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase OMPdecase PF00215.19 gi|15668858|ref|NP_247661.1| - 0.00049 19.5 0.1 0.0011 18.4 0.1 1.6 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NMO PF03060.10 gi|15668858|ref|NP_247661.1| - 0.0053 15.9 11.0 0.035 13.2 0.2 2.9 2 1 1 3 3 3 2 Nitronate monooxygenase Dus PF01207.12 gi|15668858|ref|NP_247661.1| - 0.0065 15.3 0.3 2.4 6.9 0.0 2.4 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|15668858|ref|NP_247661.1| - 0.024 13.9 1.9 0.64 9.2 0.1 3.0 2 1 1 3 3 3 0 Histidine biosynthesis protein DUF438 PF04282.8 gi|15668858|ref|NP_247661.1| - 0.026 14.2 2.5 2.3 8.0 0.0 3.1 4 0 0 4 4 4 0 Family of unknown function (DUF438) IGPS PF00218.16 gi|15668858|ref|NP_247661.1| - 0.085 11.9 0.1 0.29 10.1 0.0 1.9 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase DUF389 PF04087.9 gi|15668859|ref|NP_247662.1| - 2.1e-35 121.7 16.1 4.6e-35 120.5 11.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF389) Transket_pyr PF02779.19 gi|15668860|ref|NP_247663.1| - 3.5e-45 153.6 0.1 5.4e-45 153.0 0.1 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.15 gi|15668860|ref|NP_247663.1| - 7.7e-31 106.6 0.2 2.9e-30 104.7 0.1 1.9 2 0 0 2 2 2 1 Transketolase, C-terminal domain Ribul_P_3_epim PF00834.14 gi|15668861|ref|NP_247664.1| - 3.3e-82 274.4 2.1 3.9e-82 274.2 1.4 1.1 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.12 gi|15668861|ref|NP_247664.1| - 0.00019 20.7 0.7 0.00027 20.2 0.1 1.6 2 0 0 2 2 2 1 PcrB family TMP-TENI PF02581.12 gi|15668861|ref|NP_247664.1| - 0.017 14.2 0.6 0.1 11.7 0.2 2.1 1 1 1 2 2 2 0 Thiamine monophosphate synthase/TENI Transketolase_N PF00456.16 gi|15668862|ref|NP_247665.1| - 2.2e-75 253.5 0.0 4.2e-75 252.6 0.0 1.4 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.1 gi|15668862|ref|NP_247665.1| - 3.8e-13 48.9 0.0 1.3e-08 34.0 0.0 2.5 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.15 gi|15668862|ref|NP_247665.1| - 1.7e-07 30.2 0.0 2.2e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.16 gi|15668862|ref|NP_247665.1| - 6.1e-06 25.8 0.3 0.00024 20.6 0.2 2.4 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.5 gi|15668862|ref|NP_247665.1| - 3.4e-05 22.5 0.1 6.5e-05 21.6 0.0 1.5 1 1 0 1 1 1 1 XFP N-terminal domain RtcB PF01139.12 gi|15668863|ref|NP_247666.1| - 6.5e-153 509.6 0.5 1.4e-129 432.8 0.8 2.2 2 0 0 2 2 2 2 tRNA-splicing ligase RtcB LAGLIDADG_3 PF14528.1 gi|15668863|ref|NP_247666.1| - 8.2e-24 83.6 7.4 3.1e-18 65.7 0.1 3.8 4 0 0 4 4 4 2 LAGLIDADG-like domain Intein_splicing PF14890.1 gi|15668863|ref|NP_247666.1| - 0.0003 19.8 11.3 0.09 11.6 0.8 4.5 4 1 1 5 5 5 2 Intein splicing domain Radical_SAM PF04055.16 gi|15668864|ref|NP_247667.1| - 7.7e-09 35.9 0.1 1.4e-08 35.1 0.0 1.4 2 0 0 2 2 2 1 Radical SAM superfamily Aminotran_1_2 PF00155.16 gi|15668865|ref|NP_247668.1| - 3.4e-56 190.7 0.0 3.8e-56 190.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|15668865|ref|NP_247668.1| - 3.1e-07 29.0 0.0 4.7e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|15668865|ref|NP_247668.1| - 0.00093 18.3 0.0 0.0015 17.6 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.15 gi|15668865|ref|NP_247668.1| - 0.077 11.5 0.0 0.11 11.0 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain CbiA PF01656.18 gi|15668866|ref|NP_247669.1| - 1.4e-40 138.8 0.7 1.8e-40 138.4 0.5 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|15668866|ref|NP_247669.1| - 1.9e-12 46.9 2.3 5.7e-06 25.7 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|15668866|ref|NP_247669.1| - 2.7e-09 36.4 2.4 3.8e-09 36.0 0.4 2.1 1 1 1 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|15668866|ref|NP_247669.1| - 8.4e-08 32.3 0.1 5.1e-07 29.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain YhjQ PF06564.7 gi|15668866|ref|NP_247669.1| - 1.1e-07 31.4 0.0 2.5e-07 30.3 0.0 1.5 1 1 0 1 1 1 1 YhjQ protein MipZ PF09140.6 gi|15668866|ref|NP_247669.1| - 0.00018 20.6 1.2 0.45 9.5 0.0 2.4 2 1 0 2 2 2 2 ATPase MipZ ATP_bind_1 PF03029.12 gi|15668866|ref|NP_247669.1| - 0.0002 20.9 0.0 0.00033 20.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein KAP_NTPase PF07693.9 gi|15668866|ref|NP_247669.1| - 0.00046 19.2 0.1 0.002 17.1 0.0 1.9 2 0 0 2 2 2 1 KAP family P-loop domain AAA_17 PF13207.1 gi|15668866|ref|NP_247669.1| - 0.00046 20.9 2.4 0.034 14.9 1.7 2.7 1 1 0 1 1 1 1 AAA domain AAA_26 PF13500.1 gi|15668866|ref|NP_247669.1| - 0.0032 17.0 4.5 0.87 9.1 0.5 2.8 2 1 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|15668866|ref|NP_247669.1| - 0.0056 16.6 0.0 0.01 15.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain GTP_EFTU PF00009.22 gi|15668866|ref|NP_247669.1| - 0.0072 15.7 0.5 0.1 12.0 0.1 2.2 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_24 PF13479.1 gi|15668866|ref|NP_247669.1| - 0.0076 15.8 0.1 0.023 14.2 0.1 1.9 1 1 0 1 1 1 1 AAA domain Pox_A32 PF04665.7 gi|15668866|ref|NP_247669.1| - 0.0081 15.4 0.1 2.5 7.3 0.0 2.7 2 1 1 3 3 3 1 Poxvirus A32 protein DUF87 PF01935.12 gi|15668866|ref|NP_247669.1| - 0.0081 16.0 0.7 0.0081 16.0 0.5 2.0 2 1 0 2 2 2 1 Domain of unknown function DUF87 AAA_25 PF13481.1 gi|15668866|ref|NP_247669.1| - 0.0083 15.5 0.1 0.024 14.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|15668866|ref|NP_247669.1| - 0.014 14.3 0.3 0.03 13.2 0.2 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein TrkA_N PF02254.13 gi|15668866|ref|NP_247669.1| - 0.016 15.2 0.8 8 6.4 0.1 2.8 2 1 0 2 2 2 0 TrkA-N domain KTI12 PF08433.5 gi|15668866|ref|NP_247669.1| - 0.019 14.1 0.2 0.053 12.7 0.0 1.8 2 1 0 2 2 2 0 Chromatin associated protein KTI12 RNA_helicase PF00910.17 gi|15668866|ref|NP_247669.1| - 0.025 14.7 0.0 0.12 12.5 0.0 2.1 2 0 0 2 2 2 0 RNA helicase Toprim_4 PF13662.1 gi|15668866|ref|NP_247669.1| - 0.03 14.3 0.1 0.069 13.1 0.0 1.6 1 0 0 1 1 1 0 Toprim domain AAA_22 PF13401.1 gi|15668866|ref|NP_247669.1| - 0.044 13.9 0.2 0.31 11.1 0.2 2.4 1 1 1 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|15668866|ref|NP_247669.1| - 0.048 13.9 0.3 0.048 13.9 0.2 2.5 2 2 0 2 2 2 0 AAA domain MobB PF03205.9 gi|15668866|ref|NP_247669.1| - 0.05 13.2 0.8 0.12 12.0 0.1 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Ras PF00071.17 gi|15668866|ref|NP_247669.1| - 0.068 12.5 1.4 4.5 6.6 0.2 2.6 2 1 0 2 2 2 0 Ras family Miro PF08477.8 gi|15668866|ref|NP_247669.1| - 0.075 13.5 3.8 1.8 9.0 0.4 2.7 2 1 1 3 3 2 0 Miro-like protein AAA_10 PF12846.2 gi|15668866|ref|NP_247669.1| - 0.09 12.2 0.1 0.32 10.3 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain ArgK PF03308.11 gi|15668866|ref|NP_247669.1| - 0.092 11.5 0.8 0.17 10.6 0.1 1.7 2 0 0 2 2 2 0 ArgK protein SRP54 PF00448.17 gi|15668866|ref|NP_247669.1| - 0.11 11.8 3.6 0.63 9.4 0.2 2.6 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.18 gi|15668866|ref|NP_247669.1| - 0.93 9.4 4.6 6.8 6.6 3.2 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF262 PF03235.9 gi|15668867|ref|NP_247670.1| - 6.8e-32 111.2 3.0 6.8e-32 111.2 2.1 2.6 2 1 0 2 2 2 1 Protein of unknown function DUF262 DUF1524 PF07510.6 gi|15668867|ref|NP_247670.1| - 0.00031 20.6 2.3 0.00085 19.1 1.6 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1524) Spore_III_AB PF09548.5 gi|15668867|ref|NP_247670.1| - 0.018 14.8 3.3 0.53 10.0 0.0 2.6 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) VIT1 PF01988.14 gi|15668867|ref|NP_247670.1| - 0.024 14.1 0.1 0.64 9.4 0.2 2.2 2 0 0 2 2 2 0 VIT family DUF4367 PF14285.1 gi|15668868|ref|NP_247671.1| - 1.7e-10 40.5 4.1 1.7e-10 40.5 2.8 3.0 1 1 1 3 3 3 1 Domain of unknown function (DUF4367) LolA PF03548.10 gi|15668868|ref|NP_247671.1| - 3e-07 30.1 1.1 6.4e-07 29.1 0.8 1.5 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.4 gi|15668868|ref|NP_247671.1| - 6.9e-07 28.5 0.7 0.0012 17.9 0.3 2.7 2 0 0 2 2 2 2 Predicted periplasmic protein (DUF2092) UPF0146 PF03686.8 gi|15668869|ref|NP_247672.1| - 2.3e-51 172.9 0.5 2.7e-51 172.6 0.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) TrkA_N PF02254.13 gi|15668869|ref|NP_247672.1| - 0.03 14.3 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Methyltransf_31 PF13847.1 gi|15668869|ref|NP_247672.1| - 0.03 13.8 0.7 0.042 13.4 0.3 1.6 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15668869|ref|NP_247672.1| - 0.052 13.2 0.0 0.054 13.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L39 PF00832.15 gi|15668870|ref|NP_247673.1| - 5.7e-21 73.6 9.6 6.8e-21 73.4 6.7 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Asn_synthase PF00733.16 gi|15668871|ref|NP_247674.1| - 2.3e-06 27.3 0.0 3.2e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|15668871|ref|NP_247674.1| - 0.00017 20.9 0.0 0.00048 19.4 0.0 1.7 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15668871|ref|NP_247674.1| - 0.0058 15.2 0.0 0.0077 14.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase BpuJI_N PF11564.3 gi|15668871|ref|NP_247674.1| - 0.01 14.7 0.1 0.013 14.5 0.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease BpuJI - N terminal PAPS_reduct PF01507.14 gi|15668871|ref|NP_247674.1| - 0.024 14.4 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_4 PF01902.12 gi|15668871|ref|NP_247674.1| - 0.11 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 ATP-binding region dsDNA_bind PF01984.15 gi|15668872|ref|NP_247675.1| - 4.1e-29 100.7 14.2 4.6e-29 100.5 9.9 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DnaB_C PF03796.10 gi|15668872|ref|NP_247675.1| - 0.0047 15.8 1.0 0.0056 15.6 0.7 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain RepB PF07506.6 gi|15668872|ref|NP_247675.1| - 0.04 13.7 2.4 0.062 13.1 1.7 1.3 1 0 0 1 1 1 0 RepB plasmid partitioning protein LKAAEAR PF15478.1 gi|15668872|ref|NP_247675.1| - 0.041 14.1 4.6 0.06 13.6 3.2 1.3 1 0 0 1 1 1 0 Family of unknown function with LKAAEAR motif DUF3782 PF12644.2 gi|15668872|ref|NP_247675.1| - 1.4 8.7 6.8 18 5.2 4.7 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) Ribosomal_S19e PF01090.14 gi|15668873|ref|NP_247676.1| - 7.8e-62 206.8 0.0 8.8e-62 206.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.8 gi|15668873|ref|NP_247676.1| - 0.00042 19.8 0.0 0.0089 15.6 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB C-terminus HTH_45 PF14947.1 gi|15668873|ref|NP_247676.1| - 0.0011 18.6 0.0 0.002 17.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix GntR PF00392.16 gi|15668873|ref|NP_247676.1| - 0.023 14.1 0.1 0.084 12.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HemN_C PF06969.11 gi|15668873|ref|NP_247676.1| - 0.024 14.6 0.0 0.044 13.8 0.0 1.5 1 0 0 1 1 1 0 HemN C-terminal domain DUF4393 PF14337.1 gi|15668873|ref|NP_247676.1| - 0.13 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) ThiF PF00899.16 gi|15668874|ref|NP_247677.1| - 6.8e-12 45.3 0.7 1.3e-11 44.5 0.5 1.4 1 0 0 1 1 1 1 ThiF family TSNR_N PF04705.7 gi|15668874|ref|NP_247677.1| - 0.066 13.0 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Thiostrepton-resistance methylase, N terminus 2-Hacid_dh_C PF02826.14 gi|15668874|ref|NP_247677.1| - 0.092 11.8 0.2 0.53 9.4 0.2 1.9 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Nop PF01798.13 gi|15668875|ref|NP_247678.1| - 9.7e-56 187.2 0.2 9.7e-56 187.2 0.1 2.6 3 0 0 3 3 3 2 Putative snoRNA binding domain NOSIC PF08060.8 gi|15668875|ref|NP_247678.1| - 1.1e-19 69.9 0.2 1.1e-19 69.9 0.2 2.2 3 0 0 3 3 3 1 NOSIC (NUC001) domain DUF986 PF06173.7 gi|15668877|ref|NP_247680.1| - 0.00089 19.0 11.1 0.002 17.9 7.6 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF986) YcxB PF14317.1 gi|15668877|ref|NP_247680.1| - 0.019 14.1 1.1 0.045 13.0 0.8 1.8 1 1 0 1 1 1 0 YcxB-like protein DUF3784 PF12650.2 gi|15668877|ref|NP_247680.1| - 0.19 11.7 10.9 0.085 12.8 4.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) LRR19-TM PF15176.1 gi|15668877|ref|NP_247680.1| - 0.45 10.2 2.2 0.78 9.4 0.1 2.3 2 1 0 2 2 2 0 Leucine-rich repeat family 19 TM domain Fibrillarin PF01269.12 gi|15668878|ref|NP_247681.1| - 1.7e-98 328.1 0.6 1.9e-98 327.9 0.4 1.0 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.9 gi|15668878|ref|NP_247681.1| - 0.027 13.8 0.0 0.05 12.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|15668878|ref|NP_247681.1| - 0.068 13.7 0.0 0.11 13.0 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain IGPD PF00475.13 gi|15668879|ref|NP_247682.1| - 1.3e-57 193.7 0.1 1.8e-57 193.2 0.1 1.2 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Amidohydro_1 PF01979.15 gi|15668880|ref|NP_247683.1| - 1e-44 153.5 0.0 1.2e-44 153.3 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|15668880|ref|NP_247683.1| - 1.5e-05 25.1 0.0 0.0011 19.0 0.0 2.2 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|15668880|ref|NP_247683.1| - 2.6e-05 23.9 0.2 6e-05 22.7 0.1 1.7 1 0 0 1 1 1 1 Amidohydrolase gp45-slide_C PF09116.5 gi|15668880|ref|NP_247683.1| - 0.02 14.8 1.3 0.026 14.4 0.2 1.7 2 0 0 2 2 2 0 gp45 sliding clamp, C terminal A_deaminase PF00962.17 gi|15668880|ref|NP_247683.1| - 0.057 12.3 0.0 0.092 11.6 0.0 1.3 1 0 0 1 1 1 0 Adenosine/AMP deaminase Amidohydro_3 PF07969.6 gi|15668880|ref|NP_247683.1| - 0.12 11.6 0.0 2.6 7.1 0.0 2.2 2 0 0 2 2 2 0 Amidohydrolase family MS_channel PF00924.13 gi|15668881|ref|NP_247684.1| - 3e-48 163.9 8.4 1.2e-47 161.9 5.8 2.0 1 1 0 1 1 1 1 Mechanosensitive ion channel DUF2976 PF11190.3 gi|15668881|ref|NP_247684.1| - 1.3 8.6 10.3 0.11 12.0 3.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) DNA_primase_lrg PF04104.9 gi|15668882|ref|NP_247685.1| - 1.3e-32 113.1 0.2 2e-32 112.4 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Vac14_Fab1_bd PF12755.2 gi|15668882|ref|NP_247685.1| - 0.0005 20.4 0.0 0.0005 20.4 0.0 3.2 4 0 0 4 4 4 1 Vacuolar 14 Fab1-binding region SpoVIF PF14069.1 gi|15668882|ref|NP_247685.1| - 0.027 14.1 3.2 0.13 12.0 0.1 2.9 3 0 0 3 3 3 0 Stage VI sporulation protein F DNA_pol_E_B PF04042.11 gi|15668883|ref|NP_247686.1| - 6.6e-11 41.8 0.0 1.2e-10 40.9 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|15668883|ref|NP_247686.1| - 7.8e-11 42.0 0.2 1.9e-10 40.8 0.0 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15668883|ref|NP_247686.1| - 3.9e-07 29.6 6.0 3.4e-06 26.6 4.2 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Spore_II_R PF09551.5 gi|15668883|ref|NP_247686.1| - 0.54 10.2 7.7 1.3 9.0 5.3 1.7 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) His_biosynth PF00977.16 gi|15668884|ref|NP_247687.1| - 2.6e-41 141.3 4.0 4.4e-41 140.6 2.8 1.3 1 1 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|15668884|ref|NP_247687.1| - 3.7e-06 26.1 0.2 9.4e-06 24.8 0.1 1.8 2 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG PcrB PF01884.12 gi|15668884|ref|NP_247687.1| - 0.00075 18.8 1.7 0.00077 18.7 0.1 1.7 2 0 0 2 2 2 1 PcrB family IGPS PF00218.16 gi|15668884|ref|NP_247687.1| - 0.0021 17.1 0.1 0.6 9.1 0.0 2.4 2 1 0 2 2 2 2 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.15 gi|15668884|ref|NP_247687.1| - 0.033 12.7 0.4 0.14 10.6 0.0 2.0 2 0 0 2 2 2 0 Tryptophan synthase alpha chain Dus PF01207.12 gi|15668884|ref|NP_247687.1| - 0.05 12.4 0.1 0.085 11.6 0.0 1.3 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) PRAI PF00697.17 gi|15668884|ref|NP_247687.1| - 0.076 12.5 0.1 0.11 12.0 0.0 1.6 1 1 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DUF4181 PF13789.1 gi|15668885|ref|NP_247688.1| - 0.027 14.3 13.3 0.032 14.1 9.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF3816 PF12822.2 gi|15668885|ref|NP_247688.1| - 0.043 13.7 11.6 0.061 13.2 8.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) MIG-14_Wnt-bd PF06664.7 gi|15668885|ref|NP_247688.1| - 0.095 11.5 8.4 0.1 11.3 5.8 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF4131 PF13567.1 gi|15668885|ref|NP_247688.1| - 0.57 9.5 5.2 0.69 9.2 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1700 PF08006.6 gi|15668885|ref|NP_247688.1| - 1.1 8.4 15.0 1.3 8.2 10.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF2976 PF11190.3 gi|15668885|ref|NP_247688.1| - 1.6 8.2 9.6 76 2.9 6.6 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2976) Bac_export_2 PF01312.14 gi|15668885|ref|NP_247688.1| - 2.4 6.9 7.4 2.9 6.7 5.1 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family PIRT PF15099.1 gi|15668885|ref|NP_247688.1| - 2.7 7.2 11.4 0.19 10.9 3.7 1.9 1 1 1 2 2 2 0 Phosphoinositide-interacting protein family DUF4231 PF14015.1 gi|15668885|ref|NP_247688.1| - 3.3 7.7 8.5 4.9 7.1 5.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) DUF3043 PF11241.3 gi|15668885|ref|NP_247688.1| - 4 6.9 5.4 1.5 8.4 1.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) Picorna_P3A PF06363.6 gi|15668885|ref|NP_247688.1| - 6.7 6.7 8.4 2.2 8.3 1.5 2.2 1 1 1 2 2 2 0 Picornaviridae P3A protein DUF751 PF05421.6 gi|15668885|ref|NP_247688.1| - 8.4 6.7 13.8 1.2e+02 3.0 5.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF751) TMEM156 PF15106.1 gi|15668885|ref|NP_247688.1| - 9.5 5.3 6.9 1.8 7.7 2.6 1.5 1 1 0 1 1 1 0 TMEM156 protein family TPR_MLP1_2 PF07926.7 gi|15668886|ref|NP_247689.1| - 0.69 9.6 13.1 0.64 9.7 8.2 1.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein HMG-CoA_red PF00368.13 gi|15668887|ref|NP_247690.1| - 1.4e-149 497.8 1.9 1.5e-149 497.7 1.3 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase DUF2316 PF10078.4 gi|15668887|ref|NP_247690.1| - 0.0065 16.4 0.0 0.1 12.5 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2316) CcdA PF07362.7 gi|15668887|ref|NP_247690.1| - 0.035 13.9 0.3 0.19 11.5 0.0 2.3 3 0 0 3 3 3 0 Post-segregation antitoxin CcdA UPF0150 PF03681.10 gi|15668887|ref|NP_247690.1| - 0.11 12.1 0.1 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0150) HR1 PF02185.11 gi|15668887|ref|NP_247690.1| - 0.17 11.6 0.6 0.43 10.3 0.4 1.6 1 0 0 1 1 1 0 Hr1 repeat DUF95 PF01944.12 gi|15668888|ref|NP_247691.1| - 2.3e-24 85.9 20.7 2.9e-24 85.6 14.3 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 Wzz PF02706.10 gi|15668888|ref|NP_247691.1| - 0.037 13.8 1.2 0.037 13.8 0.8 2.7 3 0 0 3 3 3 0 Chain length determinant protein Ribosomal_L40e PF01020.12 gi|15668889|ref|NP_247692.1| - 2.1e-05 23.9 7.4 2.4e-05 23.8 5.1 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 gi|15668889|ref|NP_247692.1| - 0.0025 17.5 1.0 0.003 17.3 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-DHHC PF01529.15 gi|15668889|ref|NP_247692.1| - 0.016 14.6 1.4 0.017 14.5 1.0 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase DNA_RNApol_7kD PF03604.8 gi|15668889|ref|NP_247692.1| - 0.03 13.8 4.4 0.03 13.8 3.0 1.7 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DnaJ_CXXCXGXG PF00684.14 gi|15668889|ref|NP_247692.1| - 0.051 13.6 0.7 0.058 13.4 0.5 1.2 1 0 0 1 1 1 0 DnaJ central domain Peptidase_C74 PF12387.3 gi|15668889|ref|NP_247692.1| - 0.076 12.1 0.9 0.079 12.1 0.6 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase zf-ribbon_3 PF13248.1 gi|15668889|ref|NP_247692.1| - 0.13 11.4 2.8 0.27 10.5 1.9 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15668889|ref|NP_247692.1| - 0.14 11.7 1.4 0.26 10.8 1.0 1.5 1 1 0 1 1 1 0 zinc-ribbon domain DUF2039 PF10217.4 gi|15668889|ref|NP_247692.1| - 0.55 10.2 4.5 1.8 8.6 3.1 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) RNA_POL_M_15KD PF02150.11 gi|15668889|ref|NP_247692.1| - 1.3 8.7 4.9 6.1 6.6 3.4 2.0 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF367 PF04034.8 gi|15668890|ref|NP_247693.1| - 4.1e-57 191.2 0.3 5.8e-57 190.7 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|15668890|ref|NP_247693.1| - 1e-10 40.9 0.6 1.7e-10 40.3 0.4 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI MatE PF01554.13 gi|15668891|ref|NP_247694.1| - 1.9e-65 219.3 40.9 2e-36 125.0 6.9 3.0 3 0 0 3 3 3 2 MatE Polysacc_synt PF01943.12 gi|15668891|ref|NP_247694.1| - 1.8e-09 37.2 15.7 1.8e-09 37.2 10.9 2.6 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|15668891|ref|NP_247694.1| - 5.5e-07 29.4 17.8 5.5e-07 29.4 12.3 4.7 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF1772 PF08592.6 gi|15668891|ref|NP_247694.1| - 0.7 9.6 11.2 1 9.0 0.1 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) UPF0020 PF01170.13 gi|15668892|ref|NP_247695.1| - 2.6e-47 160.7 0.0 4e-47 160.1 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.12 gi|15668892|ref|NP_247695.1| - 2.6e-22 79.2 4.0 2.6e-22 79.2 2.8 1.9 2 0 0 2 2 2 1 THUMP domain Methyltransf_26 PF13659.1 gi|15668892|ref|NP_247695.1| - 1.2e-13 51.0 0.0 1.8e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|15668892|ref|NP_247695.1| - 4.7e-12 45.9 0.0 3.5e-09 36.4 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_31 PF13847.1 gi|15668892|ref|NP_247695.1| - 1.6e-08 34.2 0.4 2.9e-08 33.4 0.1 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|15668892|ref|NP_247695.1| - 3.6e-08 33.1 0.0 5.8e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|15668892|ref|NP_247695.1| - 2.8e-07 30.1 0.0 4.2e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6_Mtase PF02384.11 gi|15668892|ref|NP_247695.1| - 2e-06 27.0 0.0 4.8e-06 25.8 0.0 1.5 1 1 0 1 1 1 1 N-6 DNA Methylase Methyltransf_18 PF12847.2 gi|15668892|ref|NP_247695.1| - 0.00098 19.6 0.0 0.0021 18.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15668892|ref|NP_247695.1| - 0.0058 16.0 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DHC_N1 PF08385.7 gi|15668892|ref|NP_247695.1| - 0.016 13.6 0.4 0.022 13.1 0.3 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 zf-CCHH PF10283.4 gi|15668892|ref|NP_247695.1| - 0.05 13.4 0.6 0.11 12.3 0.4 1.5 1 0 0 1 1 1 0 Zinc-finger (CX5CX6HX5H) motif Methyltransf_23 PF13489.1 gi|15668892|ref|NP_247695.1| - 0.081 12.6 0.0 0.24 11.1 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Thoc2 PF11732.3 gi|15668893|ref|NP_247696.1| - 0.045 13.5 0.2 0.36 10.6 0.1 2.5 2 0 0 2 2 2 0 Transcription- and export-related complex subunit Fe-ADH_2 PF13685.1 gi|15668894|ref|NP_247697.1| - 7.2e-59 199.0 0.3 9.5e-58 195.4 0.2 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|15668894|ref|NP_247697.1| - 3.5e-21 75.2 0.1 1.1e-19 70.3 0.1 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|15668894|ref|NP_247697.1| - 4.1e-10 39.0 4.2 1.4e-08 34.0 2.9 2.8 1 1 0 1 1 1 1 3-dehydroquinate synthase Sua5_yciO_yrdC PF01300.13 gi|15668895|ref|NP_247698.1| - 4.5e-39 133.5 0.0 7.2e-39 132.8 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.7 gi|15668895|ref|NP_247698.1| - 2.5e-34 116.3 13.5 1.5e-17 62.7 1.7 2.5 2 0 0 2 2 2 2 HypF finger Acylphosphatase PF00708.13 gi|15668895|ref|NP_247698.1| - 8.3e-28 96.3 0.1 1.9e-27 95.1 0.1 1.6 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.20 gi|15668895|ref|NP_247698.1| - 0.022 14.2 0.0 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 Glycoprotease family Robl_LC7 PF03259.12 gi|15668896|ref|NP_247699.1| - 2.1e-24 84.8 1.0 2.7e-24 84.5 0.7 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.5 gi|15668896|ref|NP_247699.1| - 0.0073 15.9 0.0 0.0087 15.6 0.0 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting HMD PF03201.11 gi|15668897|ref|NP_247700.1| - 1.3e-36 124.4 2.9 1.9e-36 123.8 1.3 1.9 2 0 0 2 2 2 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase 3HCDH_N PF02737.13 gi|15668897|ref|NP_247700.1| - 0.008 15.8 0.3 0.1 12.2 0.0 2.5 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPS9 PF02204.13 gi|15668897|ref|NP_247700.1| - 0.056 13.4 0.2 0.1 12.6 0.2 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain TFIIA_gamma_N PF02268.11 gi|15668897|ref|NP_247700.1| - 0.13 11.8 0.1 0.44 10.1 0.1 1.9 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain MoaE PF02391.12 gi|15668898|ref|NP_247702.1| - 6.2e-32 109.8 0.1 6.6e-32 109.7 0.1 1.0 1 0 0 1 1 1 1 MoaE protein KMP11 PF03037.11 gi|15668898|ref|NP_247702.1| - 1.1 9.9 0.1 1.1 9.9 0.1 2.6 2 1 0 3 3 3 0 Kinetoplastid membrane protein 11 Chromate_transp PF02417.10 gi|15668899|ref|NP_247703.1| - 4e-84 280.3 42.6 5e-42 143.3 11.8 2.1 2 0 0 2 2 2 2 Chromate transporter Bacteriocin_IIc PF10439.4 gi|15668899|ref|NP_247703.1| - 0.92 9.6 3.9 1.3 9.2 0.6 2.3 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide ABC_tran PF00005.22 gi|15668900|ref|NP_247704.1| - 2.2e-45 154.3 0.0 1.5e-22 80.3 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|15668900|ref|NP_247704.1| - 1.3e-15 58.1 13.5 0.0011 19.0 0.5 4.6 3 2 2 5 5 4 4 AAA domain RLI PF04068.10 gi|15668900|ref|NP_247704.1| - 8.5e-15 54.0 4.9 1.9e-14 52.8 3.4 1.7 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.14 gi|15668900|ref|NP_247704.1| - 1.3e-13 50.6 3.2 1.1e-06 28.0 0.0 3.2 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|15668900|ref|NP_247704.1| - 1.2e-07 32.2 1.1 0.0023 18.3 0.1 2.6 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|15668900|ref|NP_247704.1| - 5.5e-07 30.4 6.2 0.0076 17.0 0.7 3.0 2 2 0 2 2 2 2 AAA domain AAA_25 PF13481.1 gi|15668900|ref|NP_247704.1| - 5.8e-07 29.0 0.4 0.033 13.5 0.0 3.3 4 0 0 4 4 4 2 AAA domain AAA_15 PF13175.1 gi|15668900|ref|NP_247704.1| - 4.3e-06 26.0 4.3 0.041 12.9 0.7 3.9 3 1 1 4 4 4 2 AAA ATPase domain Fer4 PF00037.22 gi|15668900|ref|NP_247704.1| - 4.8e-06 25.9 2.8 4.8e-06 25.9 1.9 3.0 3 0 0 3 3 3 1 4Fe-4S binding domain AAA_18 PF13238.1 gi|15668900|ref|NP_247704.1| - 5.4e-06 26.7 3.4 0.17 12.1 0.7 3.8 2 1 0 2 2 2 2 AAA domain Fer4_6 PF12837.2 gi|15668900|ref|NP_247704.1| - 7.7e-06 25.5 10.6 0.004 16.9 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_22 PF13401.1 gi|15668900|ref|NP_247704.1| - 9.8e-06 25.7 0.0 0.021 14.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain Fer4_7 PF12838.2 gi|15668900|ref|NP_247704.1| - 6.8e-05 23.1 8.8 0.00015 22.0 6.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain DUF258 PF03193.11 gi|15668900|ref|NP_247704.1| - 9e-05 21.7 0.3 0.21 10.7 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function, DUF258 Miro PF08477.8 gi|15668900|ref|NP_247704.1| - 0.00011 22.6 0.3 0.76 10.2 0.0 2.7 2 0 0 2 2 2 2 Miro-like protein MobB PF03205.9 gi|15668900|ref|NP_247704.1| - 0.00025 20.7 1.5 0.56 9.9 0.1 2.5 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.1 gi|15668900|ref|NP_247704.1| - 0.00025 20.4 0.5 0.25 10.9 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain NACHT PF05729.7 gi|15668900|ref|NP_247704.1| - 0.00028 20.5 0.2 0.4 10.3 0.0 2.4 2 0 0 2 2 2 2 NACHT domain AAA PF00004.24 gi|15668900|ref|NP_247704.1| - 0.00039 20.6 0.0 0.67 10.1 0.0 2.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|15668900|ref|NP_247704.1| - 0.0004 20.5 0.1 1.3 9.2 0.0 2.5 2 0 0 2 2 2 2 RNA helicase Fer4_21 PF14697.1 gi|15668900|ref|NP_247704.1| - 0.00049 19.8 8.3 0.0008 19.2 5.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_14 PF13173.1 gi|15668900|ref|NP_247704.1| - 0.0005 19.9 3.3 0.37 10.7 0.1 3.5 3 1 0 3 3 3 1 AAA domain Fer4_10 PF13237.1 gi|15668900|ref|NP_247704.1| - 0.0008 19.1 11.5 0.0027 17.4 8.3 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_33 PF13671.1 gi|15668900|ref|NP_247704.1| - 0.0014 18.5 0.0 0.59 10.0 0.0 3.3 2 2 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|15668900|ref|NP_247704.1| - 0.0018 18.3 1.6 0.88 9.5 0.1 2.7 2 2 0 2 2 2 1 AAA ATPase domain SbcCD_C PF13558.1 gi|15668900|ref|NP_247704.1| - 0.0026 17.6 0.2 2 8.3 0.0 3.0 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Lactococcin PF04369.8 gi|15668900|ref|NP_247704.1| - 0.0026 17.6 0.0 0.23 11.4 0.0 2.4 2 0 0 2 2 2 1 Lactococcin-like family MMR_HSR1 PF01926.18 gi|15668900|ref|NP_247704.1| - 0.0064 16.4 1.6 3.2 7.7 0.4 2.9 2 2 0 2 2 2 0 50S ribosome-binding GTPase DUF87 PF01935.12 gi|15668900|ref|NP_247704.1| - 0.0085 15.9 2.0 4.3 7.1 0.0 3.5 4 0 0 4 4 3 0 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|15668900|ref|NP_247704.1| - 0.01 15.2 0.1 1 8.7 0.0 2.6 2 1 0 2 2 2 0 AAA-like domain AAA_24 PF13479.1 gi|15668900|ref|NP_247704.1| - 0.015 14.8 3.3 0.3 10.6 0.1 2.9 4 0 0 4 4 3 0 AAA domain NTPase_1 PF03266.10 gi|15668900|ref|NP_247704.1| - 0.016 14.9 1.5 1.1 9.0 0.1 2.9 2 0 0 2 2 2 0 NTPase KAP_NTPase PF07693.9 gi|15668900|ref|NP_247704.1| - 0.021 13.8 0.0 0.64 8.9 0.0 2.1 2 0 0 2 2 2 0 KAP family P-loop domain AAA_5 PF07728.9 gi|15668900|ref|NP_247704.1| - 0.03 14.0 1.1 3 7.5 0.0 3.1 4 0 0 4 4 2 0 AAA domain (dynein-related subfamily) Fer4_9 PF13187.1 gi|15668900|ref|NP_247704.1| - 0.031 14.5 10.4 0.067 13.4 7.2 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain VirE PF05272.6 gi|15668900|ref|NP_247704.1| - 0.032 13.7 0.0 1.8 8.0 0.0 2.4 2 0 0 2 2 2 0 Virulence-associated protein E Fer4_2 PF12797.2 gi|15668900|ref|NP_247704.1| - 0.04 13.8 10.3 0.1 12.5 1.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_28 PF13521.1 gi|15668900|ref|NP_247704.1| - 0.048 13.6 0.1 6.8 6.6 0.1 2.6 2 0 0 2 2 2 0 AAA domain Fer4_16 PF13484.1 gi|15668900|ref|NP_247704.1| - 0.053 14.2 1.6 0.053 14.2 1.1 2.5 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Rad17 PF03215.10 gi|15668900|ref|NP_247704.1| - 0.053 12.1 0.0 7.2 5.1 0.0 2.2 2 0 0 2 2 2 0 Rad17 cell cycle checkpoint protein SRP54 PF00448.17 gi|15668900|ref|NP_247704.1| - 0.063 12.7 0.8 0.98 8.8 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ArgK PF03308.11 gi|15668900|ref|NP_247704.1| - 0.068 11.9 3.1 1.5 7.5 0.1 2.3 2 0 0 2 2 2 0 ArgK protein AAA_30 PF13604.1 gi|15668900|ref|NP_247704.1| - 0.074 12.6 0.1 8.6 5.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain UPF0079 PF02367.12 gi|15668900|ref|NP_247704.1| - 0.12 11.9 0.4 0.78 9.3 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 Fer4_11 PF13247.1 gi|15668900|ref|NP_247704.1| - 0.13 12.1 3.8 0.24 11.3 2.6 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain NB-ARC PF00931.17 gi|15668900|ref|NP_247704.1| - 0.14 11.0 3.2 3.7 6.3 0.0 2.4 2 0 0 2 2 2 0 NB-ARC domain ABC_ATPase PF09818.4 gi|15668900|ref|NP_247704.1| - 0.46 9.0 3.4 4.8 5.6 0.0 2.4 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Fer4_8 PF13183.1 gi|15668900|ref|NP_247704.1| - 1.2 9.2 8.3 2.4 8.2 5.7 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668900|ref|NP_247704.1| - 1.4 9.6 14.2 0.06 13.9 2.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668900|ref|NP_247704.1| - 3.1 8.2 8.2 0.38 11.2 2.2 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Iso_dh PF00180.15 gi|15668901|ref|NP_247705.1| - 7.1e-106 354.0 0.2 8e-106 353.8 0.2 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aminotran_3 PF00202.16 gi|15668902|ref|NP_247706.1| - 1e-115 386.2 0.0 1.2e-115 385.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|15668902|ref|NP_247706.1| - 3.8e-08 32.6 0.0 1.4e-05 24.1 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|15668902|ref|NP_247706.1| - 5.4e-06 25.7 0.0 1.1e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|15668902|ref|NP_247706.1| - 0.00083 18.4 0.0 0.0014 17.7 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|15668902|ref|NP_247706.1| - 0.074 11.3 0.0 0.13 10.5 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme SAS4 PF15460.1 gi|15668902|ref|NP_247706.1| - 0.11 12.3 0.1 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 DUF1949 PF09186.6 gi|15668902|ref|NP_247706.1| - 0.19 11.3 1.0 7.8 6.1 0.0 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF1949) Fer4 PF00037.22 gi|15668903|ref|NP_247707.1| - 2.4e-15 55.4 14.0 4.7e-09 35.4 3.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668903|ref|NP_247707.1| - 1.7e-11 44.1 36.9 7.8e-08 32.4 9.0 1.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668903|ref|NP_247707.1| - 4.9e-11 42.8 10.4 8.1e-11 42.1 7.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668903|ref|NP_247707.1| - 8.7e-11 41.4 21.3 1.8e-09 37.2 8.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668903|ref|NP_247707.1| - 3.4e-10 39.3 14.0 9.6e-09 34.7 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668903|ref|NP_247707.1| - 4.4e-10 39.2 6.1 5.9e-10 38.8 4.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668903|ref|NP_247707.1| - 5.3e-09 35.4 12.9 7.3e-07 28.7 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15668903|ref|NP_247707.1| - 3.3e-08 34.1 9.6 0.00096 19.8 1.9 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668903|ref|NP_247707.1| - 9.9e-08 31.9 10.8 2.2e-06 27.5 8.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15668903|ref|NP_247707.1| - 1.8e-06 27.8 11.5 2.8e-06 27.1 0.9 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15668903|ref|NP_247707.1| - 1.9e-06 28.1 8.8 0.00031 21.1 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15668903|ref|NP_247707.1| - 5.5e-05 23.4 12.0 0.00072 19.8 8.3 2.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|15668903|ref|NP_247707.1| - 9.7e-05 22.8 11.6 0.0009 19.7 8.0 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|15668903|ref|NP_247707.1| - 0.00012 22.3 13.2 0.019 15.3 2.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15668903|ref|NP_247707.1| - 0.0017 18.7 18.5 0.004 17.6 3.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|15668903|ref|NP_247707.1| - 0.096 12.5 5.6 0.2 11.5 3.9 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|15668903|ref|NP_247707.1| - 2.3 8.0 5.8 4.3 7.2 4.0 1.7 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster HTH_24 PF13412.1 gi|15668904|ref|NP_247708.1| - 1.4e-16 59.5 1.0 2.1e-16 59.0 0.7 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|15668904|ref|NP_247708.1| - 2.3e-16 59.0 0.3 3.2e-16 58.5 0.2 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|15668904|ref|NP_247708.1| - 1.7e-13 50.0 0.0 2.8e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 AsnC family HTH_11 PF08279.7 gi|15668904|ref|NP_247708.1| - 1.3e-06 27.9 0.2 2.1e-06 27.3 0.2 1.4 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.1 gi|15668904|ref|NP_247708.1| - 1.7e-06 27.4 0.0 2.5e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|15668904|ref|NP_247708.1| - 2.9e-06 27.1 0.1 4.7e-06 26.4 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.2 gi|15668904|ref|NP_247708.1| - 2.9e-06 26.9 0.0 4.2e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.6 gi|15668904|ref|NP_247708.1| - 9.4e-06 25.2 0.0 1.8e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain MarR_2 PF12802.2 gi|15668904|ref|NP_247708.1| - 1.2e-05 24.8 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|15668904|ref|NP_247708.1| - 1.9e-05 24.2 0.0 3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|15668904|ref|NP_247708.1| - 4.5e-05 23.0 0.1 7.1e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|15668904|ref|NP_247708.1| - 8.3e-05 22.2 0.0 0.00028 20.5 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.5 gi|15668904|ref|NP_247708.1| - 0.00027 20.4 0.0 0.00039 19.9 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|15668904|ref|NP_247708.1| - 0.00036 19.9 0.1 0.00059 19.2 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 TFIIE_alpha PF02002.12 gi|15668904|ref|NP_247708.1| - 0.00046 19.6 0.1 0.00065 19.1 0.1 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_38 PF13936.1 gi|15668904|ref|NP_247708.1| - 0.00055 19.4 0.4 0.00095 18.6 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|15668904|ref|NP_247708.1| - 0.00078 19.7 0.1 0.0017 18.6 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|15668904|ref|NP_247708.1| - 0.0012 18.2 0.1 0.002 17.6 0.1 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_29 PF13551.1 gi|15668904|ref|NP_247708.1| - 0.0013 18.8 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_34 PF13601.1 gi|15668904|ref|NP_247708.1| - 0.0014 18.6 0.0 0.0027 17.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|15668904|ref|NP_247708.1| - 0.0014 18.5 0.0 0.0026 17.6 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.1 gi|15668904|ref|NP_247708.1| - 0.0016 18.1 0.0 0.0027 17.4 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HxlR PF01638.12 gi|15668904|ref|NP_247708.1| - 0.0018 17.8 0.0 0.0025 17.3 0.0 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_1 PF00126.22 gi|15668904|ref|NP_247708.1| - 0.0024 17.5 0.0 0.0041 16.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_9 PF08221.6 gi|15668904|ref|NP_247708.1| - 0.003 17.3 0.0 0.0049 16.7 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain CortBP2 PF09727.4 gi|15668904|ref|NP_247708.1| - 0.005 16.3 0.0 0.0071 15.8 0.0 1.1 1 0 0 1 1 1 1 Cortactin-binding protein-2 HTH_Tnp_ISL3 PF13542.1 gi|15668904|ref|NP_247708.1| - 0.0063 15.6 0.0 0.01 14.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4 PF04545.11 gi|15668904|ref|NP_247708.1| - 0.0076 15.5 0.1 0.013 14.7 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_36 PF13730.1 gi|15668904|ref|NP_247708.1| - 0.016 15.3 0.0 0.039 14.0 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|15668904|ref|NP_247708.1| - 0.018 14.8 0.0 0.033 14.0 0.0 1.5 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC DDRGK PF09756.4 gi|15668904|ref|NP_247708.1| - 0.02 14.2 0.1 0.029 13.7 0.1 1.2 1 0 0 1 1 1 0 DDRGK domain Rrf2 PF02082.15 gi|15668904|ref|NP_247708.1| - 0.021 14.9 0.0 0.034 14.2 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Mga PF05043.8 gi|15668904|ref|NP_247708.1| - 0.027 14.7 0.0 0.045 14.0 0.0 1.3 1 0 0 1 1 1 0 Mga helix-turn-helix domain DUF2250 PF10007.4 gi|15668904|ref|NP_247708.1| - 0.036 13.9 0.0 0.06 13.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Phage_terminase PF10668.4 gi|15668904|ref|NP_247708.1| - 0.04 13.6 0.2 0.095 12.4 0.0 1.6 2 0 0 2 2 1 0 Phage terminase small subunit HTH_6 PF01418.12 gi|15668904|ref|NP_247708.1| - 0.044 13.5 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_Tnp_1 PF01527.15 gi|15668904|ref|NP_247708.1| - 0.056 13.4 0.0 0.07 13.0 0.0 1.2 1 0 0 1 1 1 0 Transposase RPA_C PF08784.6 gi|15668904|ref|NP_247708.1| - 0.069 13.5 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HTH_30 PF13556.1 gi|15668904|ref|NP_247708.1| - 0.073 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_12 PF08461.5 gi|15668904|ref|NP_247708.1| - 0.1 12.3 0.4 0.22 11.2 0.3 1.7 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain FeoC PF09012.5 gi|15668904|ref|NP_247708.1| - 0.25 11.0 0.9 0.3 10.8 0.0 1.5 2 0 0 2 2 1 0 FeoC like transcriptional regulator HhH-GPD PF00730.20 gi|15668905|ref|NP_247709.1| - 0.00026 21.2 0.0 0.00056 20.1 0.0 1.7 1 1 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein GrpE PF01025.14 gi|15668905|ref|NP_247709.1| - 0.03 13.8 0.3 0.03 13.8 0.2 2.3 3 0 0 3 3 3 0 GrpE Ribosomal_L12 PF00542.14 gi|15668905|ref|NP_247709.1| - 0.17 11.9 1.0 11 6.1 0.0 3.3 3 1 0 3 3 3 0 Ribosomal protein L7/L12 C-terminal domain FrhB_FdhB_C PF04432.8 gi|15668906|ref|NP_247710.1| - 2.4e-40 137.5 0.9 3.5e-40 137.0 0.6 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|15668906|ref|NP_247710.1| - 3.6e-23 81.2 0.0 6.3e-23 80.4 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term DUF2250 PF10007.4 gi|15668906|ref|NP_247710.1| - 0.06 13.2 0.1 0.16 11.8 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) MalM PF07148.7 gi|15668906|ref|NP_247710.1| - 0.082 12.3 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Maltose operon periplasmic protein precursor (MalM) HTH_Crp_2 PF13545.1 gi|15668906|ref|NP_247710.1| - 0.13 12.1 0.2 0.27 11.0 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Oxidored_q6 PF01058.17 gi|15668907|ref|NP_247711.1| - 3.3e-20 72.0 0.2 3.3e-20 72.0 0.1 1.7 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|15668907|ref|NP_247711.1| - 7.2e-09 34.8 27.0 2.2e-07 30.2 2.1 4.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668907|ref|NP_247711.1| - 2e-07 30.7 11.3 2e-07 30.7 7.8 3.2 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668907|ref|NP_247711.1| - 7.7e-07 29.3 11.8 7.7e-07 29.3 8.1 3.2 4 1 0 4 4 4 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668907|ref|NP_247711.1| - 2.1e-06 27.3 25.9 0.00067 19.4 2.1 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668907|ref|NP_247711.1| - 2.1e-05 24.7 13.0 2.1e-05 24.7 9.0 3.4 3 2 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668907|ref|NP_247711.1| - 0.00019 22.0 4.8 0.00019 22.0 3.4 3.3 2 1 1 3 3 3 1 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15668907|ref|NP_247711.1| - 0.00035 20.5 16.6 0.056 13.4 3.8 3.4 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668907|ref|NP_247711.1| - 0.00073 19.3 20.3 0.1 12.4 1.4 3.8 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668907|ref|NP_247711.1| - 0.00075 19.2 31.1 0.0016 18.2 3.7 4.6 3 1 1 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15668907|ref|NP_247711.1| - 0.03 14.6 3.8 0.03 14.6 2.7 4.6 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15668907|ref|NP_247711.1| - 0.081 13.5 7.8 0.081 13.5 5.4 4.4 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668907|ref|NP_247711.1| - 3.1 8.2 23.9 0.91 9.9 4.5 3.5 2 2 1 3 3 3 0 4Fe-4S dicluster domain NiFeSe_Hases PF00374.14 gi|15668908|ref|NP_247712.1| - 4.7e-09 35.5 0.1 7.3e-07 28.3 0.0 2.4 1 1 1 2 2 2 2 Nickel-dependent hydrogenase Prismane PF03063.15 gi|15668909|ref|NP_247713.1| - 7.2e-147 489.8 2.2 8.3e-147 489.6 1.5 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family CBS PF00571.23 gi|15668910|ref|NP_247714.1| - 1.5e-17 63.0 0.9 3.4e-10 39.5 0.0 2.1 2 0 0 2 2 2 2 CBS domain DUF1462 PF07315.6 gi|15668910|ref|NP_247714.1| - 0.011 15.6 1.2 0.016 15.1 0.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1462) Flavoprotein PF02441.14 gi|15668911|ref|NP_247715.1| - 1.9e-23 82.5 0.0 2.6e-23 82.1 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein DUF4546 PF15079.1 gi|15668911|ref|NP_247715.1| - 0.12 11.4 0.2 0.12 11.4 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4546) FMN_red PF03358.10 gi|15668912|ref|NP_247716.1| - 1.2e-33 115.7 0.0 1.4e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|15668912|ref|NP_247716.1| - 6e-09 35.6 0.0 8.1e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|15668912|ref|NP_247716.1| - 0.0014 18.5 0.0 0.0023 17.9 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Lactamase_B PF00753.22 gi|15668913|ref|NP_247717.1| - 1.1e-26 93.7 0.1 1.6e-26 93.1 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|15668913|ref|NP_247717.1| - 2.6e-13 50.1 0.0 4.2e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin PGM_PMM_I PF02878.11 gi|15668913|ref|NP_247717.1| - 8e-05 22.1 0.0 0.00017 21.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Flavodoxin_5 PF12724.2 gi|15668913|ref|NP_247717.1| - 0.00015 21.7 0.0 0.00025 21.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain UPF0160 PF03690.8 gi|15668913|ref|NP_247717.1| - 0.082 12.3 0.1 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) FMN_red PF03358.10 gi|15668913|ref|NP_247717.1| - 0.089 12.2 0.0 0.45 10.0 0.0 1.9 1 1 0 1 1 1 0 NADPH-dependent FMN reductase DrsE PF02635.10 gi|15668914|ref|NP_247718.1| - 2.2e-09 37.3 0.0 2.5e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family Antitoxin-MazE PF04014.13 gi|15668914|ref|NP_247718.1| - 0.13 11.9 0.1 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Antidote-toxin recognition MazE Rubrerythrin PF02915.12 gi|15668915|ref|NP_247719.1| - 2.3e-38 131.6 8.1 2.8e-38 131.3 5.6 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|15668915|ref|NP_247719.1| - 1.4e-06 28.1 5.2 1.8e-06 27.7 3.6 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.7 gi|15668915|ref|NP_247719.1| - 0.0005 19.9 5.3 0.023 14.5 0.8 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF892) UvrD_C PF13361.1 gi|15668915|ref|NP_247719.1| - 0.0082 15.6 0.6 0.0082 15.6 0.4 1.5 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain Tex_N PF09371.5 gi|15668915|ref|NP_247719.1| - 0.014 14.7 1.1 1.5 8.1 0.1 2.1 2 0 0 2 2 2 0 Tex-like protein N-terminal domain DUF3647 PF12363.3 gi|15668915|ref|NP_247719.1| - 0.025 14.6 0.6 4 7.5 0.1 2.4 2 0 0 2 2 2 0 Phage protein HypA PF01155.14 gi|15668915|ref|NP_247719.1| - 0.026 14.1 0.7 0.063 12.9 0.2 1.8 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Rubredoxin PF00301.15 gi|15668915|ref|NP_247719.1| - 0.066 13.0 1.8 2.1 8.3 0.0 2.5 2 0 0 2 2 2 0 Rubredoxin TRCF PF03461.10 gi|15668915|ref|NP_247719.1| - 0.087 12.7 0.6 15 5.5 0.0 2.5 2 0 0 2 2 2 0 TRCF domain DUF3279 PF11682.3 gi|15668915|ref|NP_247719.1| - 0.23 11.0 4.4 0.22 11.0 2.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3279) Auto_anti-p27 PF06677.7 gi|15668915|ref|NP_247719.1| - 1.1 9.1 3.4 2.3 8.0 2.3 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Rubredoxin PF00301.15 gi|15668916|ref|NP_247720.1| - 5e-23 80.7 4.7 7.3e-23 80.1 3.2 1.3 1 0 0 1 1 1 1 Rubredoxin Cys_rich_CPCC PF14206.1 gi|15668916|ref|NP_247720.1| - 0.081 12.4 5.3 0.088 12.3 0.4 2.1 1 1 1 2 2 2 0 Cysteine-rich CPCC zf-Sec23_Sec24 PF04810.10 gi|15668916|ref|NP_247720.1| - 0.097 12.2 3.1 0.38 10.3 0.1 2.2 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Zn-ribbon_8 PF09723.5 gi|15668916|ref|NP_247720.1| - 0.097 12.6 1.5 9.9 6.2 0.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|15668916|ref|NP_247720.1| - 0.13 11.9 2.6 0.8 9.4 0.6 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Desulfoferrod_N PF06397.7 gi|15668916|ref|NP_247720.1| - 0.15 11.4 0.4 0.15 11.4 0.3 1.7 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-MIZ PF02891.15 gi|15668916|ref|NP_247720.1| - 0.26 10.8 0.3 0.26 10.8 0.2 2.1 2 1 0 2 2 2 0 MIZ/SP-RING zinc finger zf-Mss51 PF13824.1 gi|15668916|ref|NP_247720.1| - 0.55 10.1 2.4 1.1 9.2 0.4 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF2296 PF10058.4 gi|15668916|ref|NP_247720.1| - 1.3 8.8 3.9 11 5.8 0.0 2.3 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) PHD PF00628.24 gi|15668916|ref|NP_247720.1| - 2.4 7.9 5.4 1.4 8.6 0.1 2.3 2 0 0 2 2 2 0 PHD-finger AhpC-TSA PF00578.16 gi|15668917|ref|NP_247721.1| - 2.1e-34 117.8 0.0 3.3e-34 117.2 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.4 gi|15668917|ref|NP_247721.1| - 1.9e-13 49.8 0.1 3.6e-13 48.9 0.1 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.5 gi|15668917|ref|NP_247721.1| - 3.4e-13 49.3 0.0 4.7e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Redoxin Unstab_antitox PF09720.5 gi|15668917|ref|NP_247721.1| - 0.031 13.9 0.2 0.14 11.8 0.1 2.1 2 0 0 2 2 2 0 Putative addiction module component Thioredoxin_8 PF13905.1 gi|15668917|ref|NP_247721.1| - 0.086 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like zf-ribbon_3 PF13248.1 gi|15668918|ref|NP_247722.1| - 0.0038 16.3 11.5 0.31 10.3 0.1 3.1 3 0 0 3 3 3 2 zinc-ribbon domain HypA PF01155.14 gi|15668918|ref|NP_247722.1| - 0.0054 16.4 3.3 0.0054 16.4 2.3 1.3 1 1 0 1 1 1 1 Hydrogenase expression/synthesis hypA family RNA_POL_M_15KD PF02150.11 gi|15668918|ref|NP_247722.1| - 0.0079 15.8 0.1 0.0079 15.8 0.1 2.5 3 0 0 3 3 2 1 RNA polymerases M/15 Kd subunit UPF0547 PF10571.4 gi|15668918|ref|NP_247722.1| - 0.014 15.0 16.0 0.02 14.5 0.2 3.2 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ISL3 PF14690.1 gi|15668918|ref|NP_247722.1| - 0.022 14.7 8.9 0.024 14.6 1.3 2.8 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TF_Zn_Ribbon PF08271.7 gi|15668918|ref|NP_247722.1| - 0.042 13.1 11.1 0.63 9.4 0.0 2.6 2 1 0 2 2 2 0 TFIIB zinc-binding NOB1_Zn_bind PF08772.6 gi|15668918|ref|NP_247722.1| - 0.1 12.4 2.6 0.13 12.1 1.8 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.2 gi|15668918|ref|NP_247722.1| - 0.19 11.5 10.5 0.43 10.4 7.4 1.6 1 1 0 1 1 1 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|15668918|ref|NP_247722.1| - 0.24 11.0 8.5 1.9 8.1 0.1 2.3 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DUF4379 PF14311.1 gi|15668918|ref|NP_247722.1| - 0.27 11.0 9.5 1.9 8.3 5.8 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4379) zinc_ribbon_2 PF13240.1 gi|15668918|ref|NP_247722.1| - 0.27 10.7 14.0 1.9 8.0 2.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Spt4 PF06093.8 gi|15668918|ref|NP_247722.1| - 0.41 10.5 3.4 0.42 10.5 2.4 1.3 1 1 0 1 1 1 0 Spt4/RpoE2 zinc finger DUF3039 PF11238.3 gi|15668918|ref|NP_247722.1| - 0.5 9.8 3.9 0.78 9.2 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) zf-A20 PF01754.11 gi|15668918|ref|NP_247722.1| - 0.78 9.3 0.2 0.78 9.3 0.1 3.6 3 1 0 3 3 3 0 A20-like zinc finger zf-C2HC5 PF06221.8 gi|15668918|ref|NP_247722.1| - 1 9.1 5.6 2.1 8.1 4.1 1.5 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type C1_1 PF00130.17 gi|15668918|ref|NP_247722.1| - 1 9.1 9.4 1.1 9.0 0.3 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RRN7 PF11781.3 gi|15668918|ref|NP_247722.1| - 1.4 8.4 7.6 0.24 10.9 0.7 2.4 2 1 1 3 3 3 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-H2C2_2 PF13465.1 gi|15668918|ref|NP_247722.1| - 1.8 8.9 0.1 1.8 8.9 0.1 2.7 3 0 0 3 3 2 0 Zinc-finger double domain Sgf11 PF08209.6 gi|15668918|ref|NP_247722.1| - 2.2 7.6 6.5 13 5.1 0.1 2.5 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Rubredoxin PF00301.15 gi|15668918|ref|NP_247722.1| - 2.4 8.1 11.9 12 5.8 5.5 2.8 2 1 0 2 2 2 0 Rubredoxin zinc_ribbon_5 PF13719.1 gi|15668918|ref|NP_247722.1| - 2.4 7.7 13.3 0.43 10.2 0.4 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Opy2 PF09463.5 gi|15668918|ref|NP_247722.1| - 2.5 8.2 10.5 1 9.5 4.7 2.1 2 1 0 2 2 2 0 Opy2 protein zinc_ribbon_4 PF13717.1 gi|15668918|ref|NP_247722.1| - 3.4 7.4 12.4 1.1 9.0 0.5 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|15668918|ref|NP_247722.1| - 3.6 7.3 8.1 7.7 6.3 5.6 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-C2H2 PF00096.21 gi|15668918|ref|NP_247722.1| - 4.1 7.9 10.5 3.1 8.3 0.1 2.9 3 0 0 3 3 3 0 Zinc finger, C2H2 type DUF329 PF03884.9 gi|15668918|ref|NP_247722.1| - 6.9 6.3 9.4 14 5.3 6.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF329) DUF2072 PF09845.4 gi|15668918|ref|NP_247722.1| - 7.3 6.5 7.1 8.9 6.2 4.9 1.4 1 1 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) zf-tcix PF14952.1 gi|15668918|ref|NP_247722.1| - 7.5 5.9 10.4 18 4.7 0.1 2.3 2 1 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn-ribbon_8 PF09723.5 gi|15668918|ref|NP_247722.1| - 7.6 6.5 15.6 1.2 9.1 6.3 2.6 2 1 0 2 2 2 0 Zinc ribbon domain MTH865 PF07747.6 gi|15668919|ref|NP_247723.1| - 4.7e-32 109.4 0.5 5.7e-32 109.1 0.3 1.1 1 0 0 1 1 1 1 MTH865-like family V4R PF02830.13 gi|15668920|ref|NP_247724.1| - 1.1e-20 73.2 1.7 1.5e-20 72.7 1.2 1.2 1 0 0 1 1 1 1 V4R domain DUF2507 PF10702.4 gi|15668920|ref|NP_247724.1| - 1.6e-09 37.4 0.0 1.9e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2507) MAAL_C PF07476.6 gi|15668920|ref|NP_247724.1| - 0.00083 18.3 0.0 0.0013 17.7 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Chlorophyllase2 PF12740.2 gi|15668920|ref|NP_247724.1| - 0.012 14.4 0.0 0.017 14.0 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme TusA PF01206.12 gi|15668920|ref|NP_247724.1| - 0.076 12.6 0.2 0.17 11.5 0.0 1.6 2 0 0 2 2 2 0 Sulfurtransferase TusA 2Fe-2S_thioredx PF01257.14 gi|15668920|ref|NP_247724.1| - 0.077 12.5 0.2 0.088 12.4 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin Rubredoxin PF00301.15 gi|15668921|ref|NP_247725.1| - 3e-22 78.2 3.2 3.3e-22 78.0 2.2 1.0 1 0 0 1 1 1 1 Rubredoxin zinc_ribbon_2 PF13240.1 gi|15668921|ref|NP_247725.1| - 0.036 13.5 0.5 0.076 12.5 0.1 1.7 2 0 0 2 2 2 0 zinc-ribbon domain Elf1 PF05129.8 gi|15668921|ref|NP_247725.1| - 0.076 12.7 0.0 0.095 12.4 0.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like OrfB_Zn_ribbon PF07282.6 gi|15668921|ref|NP_247725.1| - 0.12 12.0 0.4 3.2 7.4 0.0 2.0 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|15668921|ref|NP_247725.1| - 0.18 11.7 1.2 0.18 11.7 0.0 1.7 2 0 0 2 2 2 0 Zinc ribbon domain DUF1610 PF07754.6 gi|15668921|ref|NP_247725.1| - 0.29 11.2 0.5 0.29 11.2 0.4 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) zf-Mss51 PF13824.1 gi|15668921|ref|NP_247725.1| - 1.2 9.0 3.5 2.1 8.2 0.1 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Desulfoferrodox PF01880.13 gi|15668922|ref|NP_247726.1| - 1.9e-29 101.7 0.2 2.2e-29 101.5 0.1 1.1 1 0 0 1 1 1 1 Desulfoferrodoxin CMD PF02627.15 gi|15668923|ref|NP_247727.1| - 1.1e-12 47.6 0.0 1.2e-12 47.4 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family NAC PF01849.13 gi|15668923|ref|NP_247727.1| - 0.00035 20.0 0.5 0.00088 18.7 0.3 1.7 1 0 0 1 1 1 1 NAC domain Myosin_head PF00063.16 gi|15668923|ref|NP_247727.1| - 0.04 11.9 0.1 0.04 11.9 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) WIYLD PF10440.4 gi|15668923|ref|NP_247727.1| - 0.12 12.3 0.1 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-binding WIYLD domain CCG PF02754.11 gi|15668924|ref|NP_247728.1| - 1.8e-38 130.3 6.7 1.1e-20 73.4 0.5 2.8 3 0 0 3 3 3 2 Cysteine-rich domain DUF2024 PF09630.5 gi|15668924|ref|NP_247728.1| - 0.012 15.3 0.1 0.11 12.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) Fer4_8 PF13183.1 gi|15668925|ref|NP_247729.1| - 2.3e-12 46.7 7.9 4.5e-12 45.8 5.1 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15668925|ref|NP_247729.1| - 1e-10 41.7 8.2 2.4e-10 40.6 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668925|ref|NP_247729.1| - 2.5e-08 33.5 7.5 1.3e-07 31.3 4.2 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15668925|ref|NP_247729.1| - 2.4e-07 30.9 17.7 7.7e-07 29.2 5.9 2.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668925|ref|NP_247729.1| - 9e-07 29.1 8.8 9.8e-07 29.0 5.1 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668925|ref|NP_247729.1| - 0.00011 22.5 11.1 0.00097 19.5 0.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668925|ref|NP_247729.1| - 0.00042 20.1 5.4 0.00095 18.9 3.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668925|ref|NP_247729.1| - 0.0085 16.8 14.2 0.033 14.9 7.8 2.5 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|15668925|ref|NP_247729.1| - 0.0089 15.5 12.5 0.26 10.9 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15668925|ref|NP_247729.1| - 0.0095 15.8 11.2 0.55 10.2 1.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668925|ref|NP_247729.1| - 0.036 13.9 12.6 0.13 12.1 1.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15668925|ref|NP_247729.1| - 0.13 12.6 10.1 1.6 9.2 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|15668925|ref|NP_247729.1| - 1.3 8.7 8.2 0.46 10.1 0.7 2.4 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_13 PF13370.1 gi|15668925|ref|NP_247729.1| - 4.7 7.6 9.0 7 7.1 0.2 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain V4R PF02830.13 gi|15668926|ref|NP_247730.1| - 5.5e-20 70.9 1.7 8e-20 70.4 1.2 1.2 1 0 0 1 1 1 1 V4R domain DUF2507 PF10702.4 gi|15668926|ref|NP_247730.1| - 0.0024 17.5 0.0 0.0049 16.5 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2507) DUF3937 PF13073.1 gi|15668926|ref|NP_247730.1| - 0.088 12.6 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Rubrerythrin PF02915.12 gi|15668927|ref|NP_247731.1| - 1.9e-15 57.4 6.1 2e-14 54.0 4.2 1.9 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|15668927|ref|NP_247731.1| - 6.8e-07 29.1 3.6 1.6e-05 24.6 2.5 2.1 1 1 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.1 gi|15668927|ref|NP_247731.1| - 0.0045 16.9 0.8 0.67 9.8 0.1 2.2 2 0 0 2 2 2 2 Ferritin-like domain Mob_Pre PF01076.14 gi|15668927|ref|NP_247731.1| - 0.022 14.4 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 Plasmid recombination enzyme ATC_hydrolase PF14196.1 gi|15668927|ref|NP_247731.1| - 0.034 14.5 1.5 0.045 14.1 1.0 1.4 1 0 0 1 1 1 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase Hemerythrin PF01814.18 gi|15668928|ref|NP_247732.1| - 1.5e-14 54.3 0.6 1.8e-14 54.0 0.4 1.1 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain 4HB_MCP_1 PF12729.2 gi|15668928|ref|NP_247732.1| - 0.021 14.1 0.5 0.031 13.6 0.4 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction PNPase PF03726.9 gi|15668928|ref|NP_247732.1| - 0.088 13.0 0.3 9.9 6.5 0.2 2.3 2 0 0 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DUF4090 PF13319.1 gi|15668928|ref|NP_247732.1| - 0.11 12.4 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4090) Lactamase_B PF00753.22 gi|15668929|ref|NP_247733.1| - 6.3e-24 84.7 0.1 1.2e-23 83.8 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|15668929|ref|NP_247733.1| - 9.9e-12 45.0 0.1 2.4e-11 43.7 0.0 1.7 2 0 0 2 2 2 1 Flavodoxin Lactamase_B_2 PF12706.2 gi|15668929|ref|NP_247733.1| - 9.9e-05 21.9 0.2 0.00016 21.2 0.1 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain PGM_PMM_I PF02878.11 gi|15668929|ref|NP_247733.1| - 0.0008 18.9 0.1 0.0021 17.5 0.0 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Hydrolase_4 PF12146.3 gi|15668929|ref|NP_247733.1| - 0.005 16.6 0.2 3.7 7.4 0.0 2.7 3 0 0 3 3 3 2 Putative lysophospholipase Fer4_5 PF12801.2 gi|15668930|ref|NP_247734.1| - 4.5e-16 58.3 23.7 7.5e-12 44.8 3.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.22 gi|15668930|ref|NP_247734.1| - 2.1e-10 39.7 14.1 2.1e-05 23.8 1.0 4.2 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668930|ref|NP_247734.1| - 7.2e-09 35.5 8.7 1.3e-05 25.1 0.5 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15668930|ref|NP_247734.1| - 6.6e-08 32.0 13.9 8.8e-05 22.2 0.8 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15668930|ref|NP_247734.1| - 8.5e-08 31.9 16.7 8.9e-05 22.2 3.0 3.0 3 1 0 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15668930|ref|NP_247734.1| - 3.3e-07 30.0 15.6 7.4e-07 28.8 9.2 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668930|ref|NP_247734.1| - 8.7e-07 29.2 22.7 0.00032 21.0 9.0 2.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668930|ref|NP_247734.1| - 9.4e-07 28.4 17.2 4.1e-05 23.2 0.7 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15668930|ref|NP_247734.1| - 0.00015 21.9 13.8 0.00015 21.9 9.6 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668930|ref|NP_247734.1| - 0.00017 21.9 2.0 0.00017 21.9 1.4 3.6 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15668930|ref|NP_247734.1| - 0.0055 17.2 11.1 0.053 14.0 1.0 2.5 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|15668930|ref|NP_247734.1| - 0.0067 16.6 4.0 0.0067 16.6 2.8 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain DUF808 PF05661.7 gi|15668930|ref|NP_247734.1| - 0.018 13.8 0.4 0.029 13.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF808) Fer4_3 PF12798.2 gi|15668930|ref|NP_247734.1| - 0.025 15.1 25.5 0.24 12.0 1.6 4.0 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668930|ref|NP_247734.1| - 0.16 12.3 21.4 0.45 10.8 5.6 3.2 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15668930|ref|NP_247734.1| - 0.47 11.2 19.9 0.14 12.9 1.1 3.5 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_5 PF12801.2 gi|15668931|ref|NP_247735.1| - 1.7e-18 66.1 37.3 1.6e-14 53.3 1.8 4.0 3 1 1 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15668931|ref|NP_247735.1| - 6.1e-05 22.9 14.0 0.023 14.7 2.5 3.6 4 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15668931|ref|NP_247735.1| - 0.00059 19.3 14.2 0.057 13.0 1.5 4.7 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15668931|ref|NP_247735.1| - 0.0011 18.6 16.8 0.0018 18.0 10.3 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15668931|ref|NP_247735.1| - 0.0034 17.1 11.3 0.016 15.0 0.7 3.2 4 1 0 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15668931|ref|NP_247735.1| - 0.0045 17.3 1.9 0.0045 17.3 1.3 3.7 3 1 1 4 4 4 1 4Fe-4S dicluster domain DUF4013 PF13197.1 gi|15668931|ref|NP_247735.1| - 0.0063 15.8 7.0 0.0063 15.8 4.9 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4013) Fer4_9 PF13187.1 gi|15668931|ref|NP_247735.1| - 0.012 15.8 18.5 0.041 14.1 10.0 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15668931|ref|NP_247735.1| - 0.077 12.9 0.8 0.077 12.9 0.5 3.7 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15668931|ref|NP_247735.1| - 0.15 11.9 14.8 0.1 12.5 1.7 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15668931|ref|NP_247735.1| - 0.6 10.4 24.7 0.21 11.9 5.0 3.5 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15668931|ref|NP_247735.1| - 2.3 8.6 20.2 0.44 10.9 8.8 3.1 3 1 2 5 5 4 0 4Fe-4S dicluster domain UPF0104 PF03706.8 gi|15668931|ref|NP_247735.1| - 3.2 6.9 16.1 4.2 6.5 11.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0104) DUF2367 PF10164.4 gi|15668931|ref|NP_247735.1| - 4.9 7.0 9.2 0.49 10.2 2.6 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2367) OrfB_Zn_ribbon PF07282.6 gi|15668932|ref|NP_247736.1| - 6e-25 86.6 1.6 1e-24 85.9 0.1 2.1 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|15668932|ref|NP_247736.1| - 1.2e-06 28.1 6.1 1.2e-06 28.1 4.2 1.4 1 1 0 1 1 1 1 Probable transposase DZR PF12773.2 gi|15668932|ref|NP_247736.1| - 0.051 13.3 1.1 0.087 12.6 0.8 1.3 1 0 0 1 1 1 0 Double zinc ribbon Pox_A22 PF04848.8 gi|15668932|ref|NP_247736.1| - 0.059 13.2 5.0 0.24 11.2 3.5 2.0 1 1 0 1 1 1 0 Poxvirus A22 protein PFU PF09070.6 gi|15668932|ref|NP_247736.1| - 0.071 13.1 0.8 0.18 11.8 0.3 1.9 1 1 1 2 2 2 0 PFU (PLAA family ubiquitin binding) Apolipoprotein PF01442.13 gi|15668932|ref|NP_247736.1| - 0.079 12.4 0.0 0.091 12.2 0.0 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Bromodomain PF00439.20 gi|15668932|ref|NP_247736.1| - 0.64 9.9 6.7 0.19 11.6 0.7 2.7 3 0 0 3 3 3 0 Bromodomain Rho_N PF07498.7 gi|15668933|ref|NP_247737.1| - 0.062 13.0 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Rho termination factor, N-terminal domain Phage_CP76 PF06892.6 gi|15668934|ref|NP_247738.1| - 0.072 12.4 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Phage regulatory protein CII (CP76) DnaB_2 PF07261.6 gi|15668934|ref|NP_247738.1| - 0.074 12.6 0.1 1.3 8.6 0.0 2.5 1 1 2 3 3 3 0 Replication initiation and membrane attachment DUF2202 PF09968.4 gi|15668935|ref|NP_247739.1| - 3.3e-77 257.6 4.8 3.9e-77 257.4 3.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein domain (DUF2202) Rubrerythrin PF02915.12 gi|15668935|ref|NP_247739.1| - 0.00014 22.1 1.3 0.12 12.7 0.2 2.6 1 1 1 2 2 2 2 Rubrerythrin Ferritin_2 PF13668.1 gi|15668935|ref|NP_247739.1| - 0.0041 17.0 0.0 0.11 12.4 0.0 2.1 1 1 1 2 2 2 1 Ferritin-like domain Ribosomal_L19e PF01280.15 gi|15668935|ref|NP_247739.1| - 0.008 15.9 0.2 0.02 14.6 0.1 1.7 1 0 0 1 1 1 1 Ribosomal protein L19e TPPII_N PF12583.3 gi|15668935|ref|NP_247739.1| - 0.04 14.0 0.0 0.07 13.2 0.0 1.5 1 1 0 1 1 1 0 Tripeptidyl peptidase II N terminal CW_binding_2 PF04122.7 gi|15668936|ref|NP_247740.1| - 3.2e-14 52.8 0.6 2.2e-09 37.4 0.0 2.5 3 0 0 3 3 3 2 Putative cell wall binding repeat 2 CorA PF01544.13 gi|15668936|ref|NP_247740.1| - 0.011 14.8 0.5 0.018 14.0 0.4 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4363 PF14276.1 gi|15668936|ref|NP_247740.1| - 0.032 13.9 4.0 0.23 11.1 2.8 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4363) dTMP_synthase PF02593.9 gi|15668938|ref|NP_247742.1| - 4.8e-78 261.4 1.4 5.4e-78 261.2 0.9 1.0 1 0 0 1 1 1 1 Thymidylate synthase Lip_prot_lig_C PF10437.4 gi|15668938|ref|NP_247742.1| - 0.01 15.4 0.5 0.04 13.5 0.2 2.1 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Fe_hyd_SSU PF02256.12 gi|15668938|ref|NP_247742.1| - 2.4 8.2 7.6 2.5 8.1 0.1 3.1 4 0 0 4 4 4 0 Iron hydrogenase small subunit Ric8 PF10165.4 gi|15668939|ref|NP_247743.1| - 0.051 12.3 0.0 0.054 12.3 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn DUF2306 PF10067.4 gi|15668940|ref|NP_247744.1| - 2.7 8.1 9.5 0.66 10.1 3.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2306) DUF3487 PF11990.3 gi|15668940|ref|NP_247744.1| - 7.7 5.9 10.4 0.38 10.1 2.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) DrsE PF02635.10 gi|15668941|ref|NP_247745.1| - 1.3e-16 60.7 0.0 4.2e-16 59.0 0.0 1.8 2 0 0 2 2 2 1 DsrE/DsrF-like family TusA PF01206.12 gi|15668941|ref|NP_247745.1| - 2.1e-16 59.2 0.2 3.5e-13 48.9 0.0 2.3 2 0 0 2 2 2 2 Sulfurtransferase TusA DrsE_2 PF13686.1 gi|15668941|ref|NP_247745.1| - 1e-10 41.5 0.0 6e-06 26.0 0.0 2.6 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family STN PF07660.9 gi|15668941|ref|NP_247745.1| - 0.042 13.4 0.1 0.13 11.8 0.1 1.9 1 0 0 1 1 1 0 Secretin and TonB N terminus short domain DUF3801 PF12687.2 gi|15668941|ref|NP_247745.1| - 0.42 10.1 3.2 0.89 9.0 0.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3801) TatD_DNase PF01026.16 gi|15668942|ref|NP_247746.1| - 1.4e-29 103.0 0.2 1.6e-29 102.8 0.1 1.0 1 0 0 1 1 1 1 TatD related DNase PTE PF02126.13 gi|15668942|ref|NP_247746.1| - 0.0037 16.3 0.0 0.0059 15.6 0.0 1.3 1 0 0 1 1 1 1 Phosphotriesterase family BsuBI_PstI_RE PF06616.6 gi|15668942|ref|NP_247746.1| - 0.0038 16.0 0.0 0.0051 15.6 0.0 1.2 1 0 0 1 1 1 1 BsuBI/PstI restriction endonuclease C-terminus SLAC1 PF03595.12 gi|15668943|ref|NP_247747.1| - 4.9e-77 258.7 53.0 5.5e-77 258.6 36.7 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Cupin_2 PF07883.6 gi|15668945|ref|NP_247749.1| - 6.8e-06 25.4 0.0 8.7e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain KduI PF04962.7 gi|15668945|ref|NP_247749.1| - 2.4e-05 23.5 0.0 3e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 KduI/IolB family Cupin_1 PF00190.17 gi|15668945|ref|NP_247749.1| - 0.0001 21.7 0.1 0.00016 21.1 0.0 1.3 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|15668945|ref|NP_247749.1| - 0.00017 20.8 0.0 0.00022 20.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.13 gi|15668945|ref|NP_247749.1| - 0.0005 19.7 0.7 0.00063 19.3 0.5 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|15668945|ref|NP_247749.1| - 0.011 15.6 0.2 0.014 15.3 0.2 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like AraC_binding PF02311.14 gi|15668945|ref|NP_247749.1| - 0.013 15.2 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF4437 PF14499.1 gi|15668945|ref|NP_247749.1| - 0.1 11.4 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4437) Prismane PF03063.15 gi|298575370|ref|NP_247750.3| - 1.5e-174 581.2 0.1 1.6e-174 581.0 0.1 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DUF3231 PF11553.3 gi|298575370|ref|NP_247750.3| - 0.11 12.0 0.1 8 5.9 0.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3231) Ovate PF04844.8 gi|298575370|ref|NP_247750.3| - 0.24 11.2 0.9 0.62 9.8 0.1 2.0 2 0 0 2 2 2 0 Transcriptional repressor, ovate CGGC PF08821.6 gi|15668947|ref|NP_247751.1| - 9.8e-16 57.7 0.9 1.1e-15 57.6 0.6 1.0 1 0 0 1 1 1 1 CGGC domain B12-binding PF02310.14 gi|15668947|ref|NP_247751.1| - 0.023 14.5 0.0 0.026 14.3 0.0 1.0 1 0 0 1 1 1 0 B12 binding domain PTCB-BRCT PF12738.2 gi|15668947|ref|NP_247751.1| - 0.025 14.4 0.0 3.3 7.6 0.0 2.1 1 1 1 2 2 2 0 twin BRCT domain Ribosomal_L12 PF00542.14 gi|15668947|ref|NP_247751.1| - 0.028 14.4 0.9 0.14 12.1 0.6 1.9 1 1 0 1 1 1 0 Ribosomal protein L7/L12 C-terminal domain zf-HC5HC2H_2 PF13832.1 gi|15668947|ref|NP_247751.1| - 0.19 11.7 1.1 0.19 11.7 0.7 1.2 1 1 0 1 1 1 0 PHD-zinc-finger like domain RHH_1 PF01402.16 gi|15668948|ref|NP_247752.1| - 4.3e-10 39.0 0.4 2e-09 36.9 0.1 2.1 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family NikR_C PF08753.6 gi|15668948|ref|NP_247752.1| - 2.8e-06 27.0 0.1 4.4e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain DUF4375 PF14300.1 gi|15668948|ref|NP_247752.1| - 0.051 13.5 0.1 0.099 12.6 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) F420_ligase PF01996.11 gi|15668949|ref|NP_247753.1| - 1.8e-72 243.1 1.7 2e-72 242.9 1.2 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase LsmAD PF06741.8 gi|15668949|ref|NP_247753.1| - 0.17 11.9 0.2 27 4.9 0.0 2.4 1 1 1 2 2 2 0 LsmAD domain HTH_7 PF02796.10 gi|15668950|ref|NP_247754.1| - 3.3e-06 26.8 0.1 1.9e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_17 PF12728.2 gi|15668950|ref|NP_247754.1| - 8.9e-05 22.6 1.2 0.0017 18.5 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|15668950|ref|NP_247754.1| - 0.00015 21.2 0.0 0.00039 19.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|15668950|ref|NP_247754.1| - 0.0019 17.7 0.0 0.0038 16.8 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_ECF PF07638.6 gi|15668950|ref|NP_247754.1| - 0.0023 17.6 0.0 0.0032 17.1 0.0 1.2 1 0 0 1 1 1 1 ECF sigma factor HTH_40 PF14493.1 gi|15668950|ref|NP_247754.1| - 0.006 16.7 0.1 0.019 15.1 0.0 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain GerE PF00196.14 gi|15668950|ref|NP_247754.1| - 0.0087 15.3 0.0 0.016 14.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.11 gi|15668950|ref|NP_247754.1| - 0.019 14.2 0.0 0.054 12.8 0.0 1.8 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_28 PF13518.1 gi|15668950|ref|NP_247754.1| - 0.019 14.9 0.0 0.047 13.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain SpoIIID PF12116.3 gi|15668950|ref|NP_247754.1| - 0.022 14.6 0.3 0.048 13.5 0.0 1.8 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_24 PF13412.1 gi|15668950|ref|NP_247754.1| - 0.027 13.8 0.0 0.095 12.1 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding CarD_CdnL_TRCF PF02559.11 gi|15668950|ref|NP_247754.1| - 0.036 14.1 0.5 0.089 12.8 0.3 1.9 1 1 0 1 1 1 0 CarD-like/TRCF domain DUF2481 PF10654.4 gi|15668950|ref|NP_247754.1| - 0.044 13.4 0.9 0.069 12.8 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2481) Sigma70_r4_2 PF08281.7 gi|15668950|ref|NP_247754.1| - 0.059 12.8 0.0 0.41 10.1 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 Terminase_5 PF06056.7 gi|15668950|ref|NP_247754.1| - 0.1 12.1 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_ISL3 PF13542.1 gi|15668950|ref|NP_247754.1| - 0.15 11.2 0.0 0.46 9.7 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Imm47 PF15586.1 gi|15668950|ref|NP_247754.1| - 0.25 11.1 2.4 1.7 8.4 0.3 2.4 2 0 0 2 2 2 0 Immunity protein 47 MerR_1 PF13411.1 gi|15668950|ref|NP_247754.1| - 0.66 9.7 4.6 0.39 10.5 0.4 2.7 3 1 1 4 4 4 0 MerR HTH family regulatory protein Phage_integrase PF00589.17 gi|15668951|ref|NP_247755.1| - 6.9e-11 42.1 0.2 9.3e-11 41.6 0.2 1.2 1 0 0 1 1 1 1 Phage integrase family DUF1371 PF07115.6 gi|15668951|ref|NP_247755.1| - 0.4 10.8 5.8 0.63 10.2 0.3 3.0 2 1 0 3 3 3 0 Protein of unknown function (DUF1371) TP_methylase PF00590.15 gi|15668952|ref|NP_247756.1| - 3.6e-43 147.7 0.0 4.1e-43 147.5 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TrmB PF01978.14 gi|15668953|ref|NP_247757.1| - 0.0067 16.1 0.8 0.017 14.7 0.6 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.14 gi|15668953|ref|NP_247757.1| - 0.019 14.8 1.9 0.028 14.3 0.1 2.2 2 1 0 2 2 2 0 Ferric uptake regulator family PadR PF03551.9 gi|15668953|ref|NP_247757.1| - 0.038 13.7 1.3 8 6.3 0.1 2.4 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_36 PF13730.1 gi|15668953|ref|NP_247757.1| - 0.072 13.2 2.5 0.34 11.0 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_IclR PF09339.5 gi|15668953|ref|NP_247757.1| - 0.079 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.15 gi|15668953|ref|NP_247757.1| - 0.12 12.0 0.0 0.27 10.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|15668953|ref|NP_247757.1| - 0.2 11.0 0.1 0.2 11.0 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Arch_ATPase PF01637.13 gi|15668955|ref|NP_247759.1| - 7.7e-14 51.9 0.0 1.5e-13 51.0 0.0 1.5 1 1 0 1 1 1 1 Archaeal ATPase HTH_5 PF01022.15 gi|15668955|ref|NP_247759.1| - 4.6e-13 48.6 0.0 1.9e-12 46.6 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family AAA_16 PF13191.1 gi|15668955|ref|NP_247759.1| - 5.8e-10 39.4 0.0 2e-09 37.6 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|15668955|ref|NP_247759.1| - 3.5e-05 24.0 0.0 0.00016 21.8 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|15668955|ref|NP_247759.1| - 9.6e-05 21.3 0.1 0.051 12.4 0.0 2.2 2 0 0 2 2 2 2 NB-ARC domain AAA_22 PF13401.1 gi|15668955|ref|NP_247759.1| - 0.00011 22.3 0.0 0.00037 20.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain DUF2791 PF10923.3 gi|15668955|ref|NP_247759.1| - 0.00028 19.6 0.1 0.0054 15.3 0.0 2.2 2 0 0 2 2 2 1 P-loop Domain of unknown function (DUF2791) MarR_2 PF12802.2 gi|15668955|ref|NP_247759.1| - 0.00028 20.5 0.0 0.0006 19.4 0.0 1.6 1 0 0 1 1 1 1 MarR family ABC_tran PF00005.22 gi|15668955|ref|NP_247759.1| - 0.00068 19.9 0.2 0.0025 18.1 0.1 2.0 2 1 0 2 2 2 1 ABC transporter HTH_38 PF13936.1 gi|15668955|ref|NP_247759.1| - 0.00072 19.0 0.1 0.0026 17.2 0.0 2.1 2 0 0 2 2 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|15668955|ref|NP_247759.1| - 0.00085 19.4 0.0 0.0024 17.9 0.0 1.8 1 0 0 1 1 1 1 Penicillinase repressor HTH_27 PF13463.1 gi|15668955|ref|NP_247759.1| - 0.0023 18.2 0.0 0.0096 16.2 0.0 2.1 2 0 0 2 2 1 1 Winged helix DNA-binding domain Sigma70_r4_2 PF08281.7 gi|15668955|ref|NP_247759.1| - 0.0039 16.6 0.0 0.016 14.6 0.0 2.1 1 1 0 1 1 1 1 Sigma-70, region 4 TrmB PF01978.14 gi|15668955|ref|NP_247759.1| - 0.0041 16.8 0.1 0.009 15.7 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF815 PF05673.8 gi|15668955|ref|NP_247759.1| - 0.0043 16.0 0.6 0.0078 15.1 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_14 PF13173.1 gi|15668955|ref|NP_247759.1| - 0.005 16.7 0.3 1.5 8.7 0.2 2.8 2 1 0 2 2 1 1 AAA domain MarR PF01047.17 gi|15668955|ref|NP_247759.1| - 0.0054 16.4 0.0 0.012 15.2 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|15668955|ref|NP_247759.1| - 0.0056 16.0 0.0 0.015 14.6 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PaaX PF07848.7 gi|15668955|ref|NP_247759.1| - 0.016 15.2 0.0 0.041 13.8 0.0 1.8 1 0 0 1 1 1 0 PaaX-like protein Fe_dep_repress PF01325.14 gi|15668955|ref|NP_247759.1| - 0.018 14.9 0.0 0.057 13.3 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.15 gi|15668955|ref|NP_247759.1| - 0.018 15.1 0.2 0.74 9.9 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulator AAA_10 PF12846.2 gi|15668955|ref|NP_247759.1| - 0.026 13.9 0.6 0.35 10.2 0.1 2.5 2 1 0 3 3 3 0 AAA-like domain DUF258 PF03193.11 gi|15668955|ref|NP_247759.1| - 0.027 13.6 0.0 0.056 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_30 PF13604.1 gi|15668955|ref|NP_247759.1| - 0.035 13.6 0.0 0.1 12.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain Miro PF08477.8 gi|15668955|ref|NP_247759.1| - 0.045 14.2 0.1 0.16 12.4 0.1 2.0 1 1 0 1 1 1 0 Miro-like protein HTH_20 PF12840.2 gi|15668955|ref|NP_247759.1| - 0.054 13.3 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|15668955|ref|NP_247759.1| - 0.056 13.0 0.0 0.16 11.6 0.0 1.7 1 0 0 1 1 1 0 HTH domain FeoC PF09012.5 gi|15668955|ref|NP_247759.1| - 0.076 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator AAA_5 PF07728.9 gi|15668955|ref|NP_247759.1| - 0.093 12.4 0.1 0.55 9.9 0.1 2.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) HTH_IclR PF09339.5 gi|15668955|ref|NP_247759.1| - 0.094 12.3 0.0 0.22 11.1 0.0 1.7 1 1 0 1 1 1 0 IclR helix-turn-helix domain MobB PF03205.9 gi|15668955|ref|NP_247759.1| - 0.098 12.3 0.1 0.3 10.7 0.0 1.8 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B HTH_Tnp_ISL3 PF13542.1 gi|15668955|ref|NP_247759.1| - 0.11 11.6 0.0 0.43 9.8 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain of transposase family ISL3 GCHY-1 PF02649.9 gi|15668956|ref|NP_247760.1| - 9.9e-86 287.3 1.6 1.1e-85 287.2 1.1 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 LYTB PF02401.13 gi|15668956|ref|NP_247760.1| - 0.051 12.4 1.7 0.53 9.1 0.0 2.1 2 0 0 2 2 2 0 LytB protein RecX PF02631.11 gi|15668956|ref|NP_247760.1| - 0.077 13.2 0.1 13 6.0 0.0 2.6 3 0 0 3 3 3 0 RecX family ATP-grasp_3 PF02655.9 gi|15668957|ref|NP_247761.1| - 1.7e-40 138.5 0.1 3.2e-40 137.6 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|15668957|ref|NP_247761.1| - 9.6e-12 45.0 0.0 2.3e-11 43.7 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|15668957|ref|NP_247761.1| - 2.7e-11 42.8 0.1 2.3e-09 36.4 0.0 2.8 2 1 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.6 gi|15668957|ref|NP_247761.1| - 1.8e-08 34.0 0.2 3.8e-08 33.0 0.1 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|15668957|ref|NP_247761.1| - 1.1e-05 24.6 0.1 3.8e-05 22.9 0.0 1.9 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.1 gi|15668957|ref|NP_247761.1| - 0.00026 19.8 0.2 0.00044 19.1 0.1 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp Drc1-Sld2 PF11719.3 gi|15668957|ref|NP_247761.1| - 0.039 13.0 0.4 0.058 12.4 0.3 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein TFIIE_alpha PF02002.12 gi|15668958|ref|NP_247762.1| - 4.1e-40 135.5 5.0 4.1e-40 135.5 3.5 1.7 2 0 0 2 2 2 1 TFIIE alpha subunit TF_Zn_Ribbon PF08271.7 gi|15668958|ref|NP_247762.1| - 3.9e-08 32.4 2.1 8.1e-08 31.4 1.5 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding TrmB PF01978.14 gi|15668958|ref|NP_247762.1| - 0.00011 21.7 0.9 0.00044 19.9 0.0 2.3 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB Sigma70_r3 PF04539.11 gi|15668958|ref|NP_247762.1| - 0.00017 21.4 1.0 0.00028 20.7 0.0 1.9 3 0 0 3 3 1 1 Sigma-70 region 3 HTH_9 PF08221.6 gi|15668958|ref|NP_247762.1| - 0.00026 20.8 0.0 0.0005 19.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Rad50_zn_hook PF04423.9 gi|15668958|ref|NP_247762.1| - 0.00033 20.0 0.6 0.00033 20.0 0.4 3.7 3 1 1 4 4 4 1 Rad50 zinc hook motif HypA PF01155.14 gi|15668958|ref|NP_247762.1| - 0.0011 18.6 0.1 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Rrf2 PF02082.15 gi|15668958|ref|NP_247762.1| - 0.0026 17.8 0.0 0.005 16.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator DUF2202 PF09968.4 gi|15668958|ref|NP_247762.1| - 0.0041 16.8 0.8 0.0084 15.7 0.5 1.5 1 0 0 1 1 1 1 Uncharacterized protein domain (DUF2202) HTH_24 PF13412.1 gi|15668958|ref|NP_247762.1| - 0.0085 15.4 1.6 0.062 12.6 0.0 2.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding GntR PF00392.16 gi|15668958|ref|NP_247762.1| - 0.014 14.8 0.2 0.053 12.9 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.14 gi|15668958|ref|NP_247762.1| - 0.023 14.6 0.1 0.081 12.8 0.0 2.0 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_5 PF01022.15 gi|15668958|ref|NP_247762.1| - 0.033 13.8 0.0 0.074 12.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF2095 PF09868.4 gi|15668958|ref|NP_247762.1| - 0.05 13.3 0.4 0.05 13.3 0.3 2.0 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2095) Sigma70_r4_2 PF08281.7 gi|15668958|ref|NP_247762.1| - 0.052 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DZR PF12773.2 gi|15668958|ref|NP_247762.1| - 0.061 13.1 0.4 0.1 12.4 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon HTH_20 PF12840.2 gi|15668958|ref|NP_247762.1| - 0.07 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Prefoldin_2 PF01920.15 gi|15668958|ref|NP_247762.1| - 0.096 12.4 0.1 0.096 12.4 0.1 3.0 4 0 0 4 4 4 0 Prefoldin subunit zf-Di19 PF05605.7 gi|15668958|ref|NP_247762.1| - 0.1 12.7 0.2 4.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_5 PF13719.1 gi|15668958|ref|NP_247762.1| - 0.14 11.7 1.5 0.71 9.4 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|15668958|ref|NP_247762.1| - 0.14 11.3 0.3 5.4 6.2 0.0 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger HTH_IclR PF09339.5 gi|15668958|ref|NP_247762.1| - 0.17 11.4 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain zinc_ribbon_4 PF13717.1 gi|15668958|ref|NP_247762.1| - 0.19 11.4 2.3 0.45 10.2 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|15668958|ref|NP_247762.1| - 0.5 9.6 5.4 4 6.7 0.8 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HD PF01966.17 gi|15668959|ref|NP_247763.1| - 7.1e-20 71.2 1.0 7.1e-20 71.2 0.7 1.4 2 0 0 2 2 2 1 HD domain HDOD PF08668.7 gi|15668959|ref|NP_247763.1| - 4.1e-05 22.9 0.0 0.002 17.4 0.0 2.2 1 1 1 2 2 2 2 HDOD domain ApbA PF02558.11 gi|15668959|ref|NP_247763.1| - 0.11 11.9 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA T2SF PF00482.18 gi|15668960|ref|NP_247764.1| - 3.5e-11 43.0 2.5 3.5e-11 43.0 1.7 2.5 2 1 1 3 3 3 1 Type II secretion system (T2SS), protein F Phasin PF05597.6 gi|15668960|ref|NP_247764.1| - 0.17 11.6 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) T2SF PF00482.18 gi|15668961|ref|NP_247765.1| - 4e-14 52.5 0.5 4e-14 52.5 0.4 2.8 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F DUF2207 PF09972.4 gi|15668961|ref|NP_247765.1| - 6.7 5.1 8.9 0.29 9.6 0.6 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) T2SE PF00437.15 gi|15668962|ref|NP_247766.1| - 6.9e-58 195.6 0.0 7.8e-55 185.6 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein PT-HINT PF07591.6 gi|15668962|ref|NP_247766.1| - 8.6e-10 38.6 2.1 2.2e-09 37.2 1.4 1.7 1 0 0 1 1 1 1 Pretoxin HINT domain Hint PF01079.15 gi|15668962|ref|NP_247766.1| - 1.2e-06 27.9 0.1 2.1e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Hint module AAA_29 PF13555.1 gi|15668962|ref|NP_247766.1| - 0.00019 20.8 0.2 0.0028 17.1 0.1 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|15668962|ref|NP_247766.1| - 0.0005 20.3 0.1 0.0016 18.7 0.0 1.9 2 0 0 2 2 2 1 ABC transporter FtsK_SpoIIIE PF01580.13 gi|15668962|ref|NP_247766.1| - 0.00054 19.5 0.4 0.0011 18.5 0.0 1.6 2 0 0 2 2 2 1 FtsK/SpoIIIE family E1-E2_ATPase PF00122.15 gi|15668962|ref|NP_247766.1| - 0.012 14.7 0.2 0.026 13.5 0.0 1.6 2 0 0 2 2 2 0 E1-E2 ATPase AAA_10 PF12846.2 gi|15668962|ref|NP_247766.1| - 0.015 14.7 0.0 0.029 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA-like domain Zeta_toxin PF06414.7 gi|15668962|ref|NP_247766.1| - 0.019 14.0 0.0 0.036 13.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.1 gi|15668962|ref|NP_247766.1| - 0.047 14.0 2.5 0.23 11.7 0.0 3.2 4 0 0 4 4 3 0 AAA domain AAA_19 PF13245.1 gi|15668962|ref|NP_247766.1| - 0.054 13.2 0.1 0.23 11.2 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain DEAD PF00270.24 gi|15668962|ref|NP_247766.1| - 0.11 11.9 0.0 0.34 10.3 0.0 1.8 1 0 0 1 1 1 0 DEAD/DEAH box helicase LVIVD PF08309.6 gi|15668962|ref|NP_247766.1| - 0.12 11.3 0.7 0.72 8.8 0.0 2.4 2 0 0 2 2 2 0 LVIVD repeat AAA_16 PF13191.1 gi|15668962|ref|NP_247766.1| - 0.18 11.8 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain TFIIB PF00382.14 gi|15668963|ref|NP_247767.1| - 4e-46 154.6 1.4 1.4e-22 79.3 0.2 2.6 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|15668963|ref|NP_247767.1| - 2.3e-16 58.8 2.8 9e-16 56.9 2.0 2.1 2 0 0 2 2 2 1 TFIIB zinc-binding HTH_AsnC-type PF13404.1 gi|15668963|ref|NP_247767.1| - 0.0037 16.7 0.2 0.023 14.2 0.1 2.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.11 gi|15668963|ref|NP_247767.1| - 0.0046 16.2 0.3 0.068 12.4 0.1 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 zf-ribbon_3 PF13248.1 gi|15668963|ref|NP_247767.1| - 0.017 14.2 1.7 0.032 13.4 1.2 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|15668963|ref|NP_247767.1| - 0.018 15.3 4.3 0.04 14.2 2.0 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar LAGLIDADG_3 PF14528.1 gi|15668963|ref|NP_247767.1| - 0.25 11.5 6.5 7 6.9 1.9 3.1 2 0 0 2 2 2 0 LAGLIDADG-like domain HTH_24 PF13412.1 gi|15668963|ref|NP_247767.1| - 0.5 9.7 0.0 0.5 9.7 0.0 4.0 6 0 0 6 6 6 0 Winged helix-turn-helix DNA-binding Gar1 PF04410.9 gi|15668964|ref|NP_247768.1| - 0.0003 20.2 1.1 0.00036 20.0 0.7 1.3 1 1 0 1 1 1 1 Gar1/Naf1 RNA binding region TRAM PF01938.15 gi|15668964|ref|NP_247768.1| - 0.0065 16.2 1.4 0.01 15.5 0.4 1.7 2 0 0 2 2 2 1 TRAM domain Cyclase PF04199.8 gi|15668965|ref|NP_247769.1| - 2.1e-10 40.5 0.0 5.5e-09 35.9 0.0 2.0 1 1 0 1 1 1 1 Putative cyclase HMD PF03201.11 gi|15668966|ref|NP_247770.1| - 1.6e-41 140.1 0.3 3.3e-41 139.1 0.2 1.5 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.10 gi|15668966|ref|NP_247770.1| - 0.0043 16.8 0.0 0.011 15.5 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase OCD_Mu_crystall PF02423.10 gi|15668966|ref|NP_247770.1| - 0.083 11.6 0.0 0.18 10.5 0.0 1.6 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Radical_SAM PF04055.16 gi|15668967|ref|NP_247771.1| - 8.6e-15 55.2 1.3 8.6e-15 55.2 0.9 2.1 2 0 0 2 2 2 1 Radical SAM superfamily BATS PF06968.8 gi|15668967|ref|NP_247771.1| - 2.9e-07 30.2 0.1 6.7e-06 25.8 0.1 2.9 2 1 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain IMPDH PF00478.20 gi|15668967|ref|NP_247771.1| - 0.01 14.7 0.0 0.017 14.0 0.0 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain NmrA PF05368.8 gi|15668967|ref|NP_247771.1| - 0.028 13.6 0.1 1.1 8.4 0.0 2.3 1 1 0 2 2 2 0 NmrA-like family 7TMR-DISM_7TM PF07695.6 gi|15668968|ref|NP_247772.1| - 0.0076 15.9 14.9 0.01 15.4 10.3 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling Prefoldin PF02996.12 gi|15668969|ref|NP_247773.1| - 0.021 14.4 2.0 0.034 13.8 0.5 1.9 1 1 1 2 2 2 0 Prefoldin subunit Fibrillarin_2 PF10113.4 gi|15668970|ref|NP_247774.1| - 2.3e-268 890.6 2.1 2.7e-268 890.3 1.5 1.0 1 0 0 1 1 1 1 Fibrillarin-like archaeal protein Sec8_exocyst PF04048.9 gi|15668970|ref|NP_247774.1| - 0.19 11.3 2.2 0.4 10.2 1.5 1.5 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF2969 PF11184.3 gi|15668971|ref|NP_247775.1| - 0.0025 17.8 0.1 0.0031 17.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2969) ApoB100_C PF12491.3 gi|15668971|ref|NP_247775.1| - 0.079 12.6 1.1 0.26 10.9 0.2 2.0 2 0 0 2 2 2 0 Apolipoprotein B100 C terminal DUF2283 PF10049.4 gi|15668972|ref|NP_247776.1| - 3.2e-14 52.5 4.5 5.9e-14 51.6 3.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) DUF4479 PF14794.1 gi|15668972|ref|NP_247776.1| - 0.083 12.4 0.0 0.2 11.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4479) DUF457 PF04307.9 gi|15668973|ref|NP_247777.1| - 6e-27 93.8 18.8 1.5e-13 50.3 4.9 2.0 2 0 0 2 2 2 2 Predicted membrane-bound metal-dependent hydrolase (DUF457) Lyase_1 PF00206.15 gi|15668974|ref|NP_247778.1| - 2.5e-62 210.8 0.1 4.4e-62 210.0 0.0 1.4 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|15668974|ref|NP_247778.1| - 4.4e-20 71.5 0.0 3.7e-18 65.3 0.0 2.7 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal ADSL_C PF10397.4 gi|15668974|ref|NP_247778.1| - 0.009 16.0 0.1 0.027 14.4 0.1 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus DUF1002 PF06207.6 gi|15668974|ref|NP_247778.1| - 0.019 14.3 1.6 0.064 12.5 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) DUF2150 PF09920.4 gi|15668974|ref|NP_247778.1| - 0.026 14.1 0.4 0.026 14.1 0.3 2.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2150) DUF1048 PF06304.6 gi|15668974|ref|NP_247778.1| - 0.026 14.8 3.2 0.42 10.9 0.0 4.2 4 1 0 4 4 4 0 Protein of unknown function (DUF1048) MRP-S27 PF10037.4 gi|15668974|ref|NP_247778.1| - 0.059 12.2 2.1 0.083 11.7 0.3 1.9 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S27 DUF389 PF04087.9 gi|15668975|ref|NP_247779.1| - 1.5 8.7 7.4 0.36 10.7 1.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF389) Voltage_CLC PF00654.15 gi|15668976|ref|NP_247780.1| - 0.06 12.3 8.1 0.078 11.9 5.6 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel DUF95 PF01944.12 gi|15668977|ref|NP_247781.1| - 1.1e-37 129.3 12.9 1.2e-37 129.1 8.9 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF95 DUF4396 PF14342.1 gi|15668977|ref|NP_247781.1| - 0.081 13.0 0.1 0.081 13.0 0.1 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4396) Yip1 PF04893.12 gi|15668978|ref|NP_247782.1| - 1.9e-27 95.8 7.9 2.3e-27 95.5 5.5 1.0 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|15668978|ref|NP_247782.1| - 1.5e-14 53.9 7.5 1.8e-14 53.7 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) ABC2_membrane_4 PF12730.2 gi|15668978|ref|NP_247782.1| - 0.0013 17.9 11.8 0.0016 17.6 8.2 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein SSF PF00474.12 gi|15668978|ref|NP_247782.1| - 0.0035 16.0 3.3 0.0044 15.7 2.3 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family 5TM-5TMR_LYT PF07694.7 gi|15668978|ref|NP_247782.1| - 0.0061 15.9 8.0 0.01 15.2 5.6 1.4 1 1 0 1 1 1 1 5TMR of 5TMR-LYT Adeno_GP19K PF04881.8 gi|15668978|ref|NP_247782.1| - 0.012 15.3 0.3 0.018 14.8 0.2 1.3 1 0 0 1 1 1 0 Adenovirus GP19K Polysacc_synt_C PF14667.1 gi|15668978|ref|NP_247782.1| - 0.018 14.8 7.6 0.058 13.2 2.3 2.1 1 1 1 2 2 2 0 Polysaccharide biosynthesis C-terminal domain TM_helix PF05552.7 gi|15668978|ref|NP_247782.1| - 0.076 12.6 0.3 0.076 12.6 0.2 2.8 3 0 0 3 3 3 0 Conserved TM helix Oxidored_q1_C PF01010.14 gi|15668978|ref|NP_247782.1| - 0.29 10.6 3.8 0.35 10.3 2.7 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus ABC2_membrane_5 PF13346.1 gi|15668978|ref|NP_247782.1| - 0.35 10.1 20.0 0.34 10.1 4.4 2.1 1 1 1 2 2 2 0 ABC-2 family transporter protein K1 PF02960.9 gi|15668978|ref|NP_247782.1| - 0.88 9.6 4.5 1.7 8.7 0.1 2.2 1 1 1 2 2 2 0 K1 glycoprotein DUF3816 PF12822.2 gi|15668978|ref|NP_247782.1| - 1.5 8.7 18.7 2.7 7.8 12.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3816) DUF454 PF04304.8 gi|15668978|ref|NP_247782.1| - 2.5 8.2 7.7 7.1 6.7 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF454) SecE PF00584.15 gi|15668978|ref|NP_247782.1| - 4.6 6.9 13.3 1.7 8.3 2.6 2.5 1 1 1 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex CARDB PF07705.6 gi|15668979|ref|NP_247783.1| - 7.9e-07 29.0 26.2 1.5e-05 25.0 1.7 4.5 3 1 1 4 4 4 3 CARDB DUF912 PF06024.7 gi|15668979|ref|NP_247783.1| - 0.0059 16.6 1.5 0.018 15.0 0.2 2.4 2 0 0 2 2 2 1 Nucleopolyhedrovirus protein of unknown function (DUF912) FERM_C PF09380.5 gi|15668980|ref|NP_247784.1| - 0.16 12.2 0.5 0.3 11.3 0.4 1.4 1 0 0 1 1 1 0 FERM C-terminal PH-like domain Glyco_transf_22 PF03901.12 gi|15668980|ref|NP_247784.1| - 1.1 8.2 10.7 0.63 8.9 0.6 2.1 1 1 1 2 2 2 0 Alg9-like mannosyltransferase family NfeD PF01957.13 gi|15668980|ref|NP_247784.1| - 3.9 7.6 9.0 0.91 9.6 2.7 2.1 1 1 1 2 2 2 0 NfeD-like C-terminal, partner-binding PRA1 PF03208.14 gi|15668980|ref|NP_247784.1| - 9.9 5.4 10.7 15 4.8 7.4 1.3 1 0 0 1 1 1 0 PRA1 family protein ABC_tran PF00005.22 gi|15668981|ref|NP_247785.1| - 1.7e-37 128.7 0.0 2.6e-37 128.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15668981|ref|NP_247785.1| - 5.6e-13 49.5 0.0 6.6e-07 29.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|15668981|ref|NP_247785.1| - 1.1e-08 34.6 1.0 1.4e-06 27.6 0.7 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|15668981|ref|NP_247785.1| - 5e-06 25.8 0.5 0.047 12.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 gi|15668981|ref|NP_247785.1| - 1.9e-05 25.0 0.5 0.0012 19.1 0.3 2.3 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|15668981|ref|NP_247785.1| - 0.00032 20.4 0.1 0.0015 18.3 0.0 2.0 1 1 0 1 1 1 1 Archaeal ATPase AAA_29 PF13555.1 gi|15668981|ref|NP_247785.1| - 0.00033 20.1 0.0 0.0006 19.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|15668981|ref|NP_247785.1| - 0.00082 18.5 0.0 0.0014 17.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|15668981|ref|NP_247785.1| - 0.0015 18.5 0.1 0.0056 16.6 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.1 gi|15668981|ref|NP_247785.1| - 0.0015 17.0 0.0 0.18 10.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|15668981|ref|NP_247785.1| - 0.011 15.1 0.0 0.1 11.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|15668981|ref|NP_247785.1| - 0.012 15.2 0.0 0.35 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|15668981|ref|NP_247785.1| - 0.015 15.4 0.3 0.35 11.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|15668981|ref|NP_247785.1| - 0.025 14.4 0.0 0.23 11.3 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_24 PF13479.1 gi|15668981|ref|NP_247785.1| - 0.027 14.0 0.1 6.3 6.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|15668981|ref|NP_247785.1| - 0.038 13.4 0.0 0.17 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain AAA_17 PF13207.1 gi|15668981|ref|NP_247785.1| - 0.045 14.5 1.5 0.16 12.8 1.0 2.3 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|15668981|ref|NP_247785.1| - 0.059 12.7 0.0 2.8 7.3 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.1 gi|15668981|ref|NP_247785.1| - 0.067 13.5 4.4 0.072 13.4 0.2 2.3 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|15668981|ref|NP_247785.1| - 0.071 13.0 0.3 0.37 10.7 0.2 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.17 gi|15668981|ref|NP_247785.1| - 0.073 11.9 0.1 0.15 10.8 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_19 PF13245.1 gi|15668981|ref|NP_247785.1| - 0.078 12.7 0.0 0.75 9.5 0.0 2.3 3 0 0 3 3 3 0 Part of AAA domain AAA_14 PF13173.1 gi|15668981|ref|NP_247785.1| - 0.1 12.4 0.0 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|15668981|ref|NP_247785.1| - 0.12 11.2 0.0 0.21 10.4 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein PrgI PF12666.2 gi|15668982|ref|NP_247786.1| - 1.4 9.1 7.7 0.79 9.9 2.2 2.2 2 1 0 2 2 2 0 PrgI family protein MARVEL PF01284.18 gi|15668982|ref|NP_247786.1| - 3.5 7.4 12.0 5.1 6.9 7.9 1.6 1 1 1 2 2 2 0 Membrane-associating domain MacB_PCD PF12704.2 gi|15668983|ref|NP_247787.1| - 4e-26 92.0 0.9 4e-26 92.0 0.6 3.1 3 1 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|15668983|ref|NP_247787.1| - 1.2e-22 79.9 17.2 1.2e-22 79.9 11.9 2.2 2 0 0 2 2 2 1 FtsX-like permease family P68HR PF08061.6 gi|15668983|ref|NP_247787.1| - 0.024 14.3 0.4 0.046 13.4 0.2 1.4 1 0 0 1 1 1 0 P68HR (NUC004) repeat DUF4191 PF13829.1 gi|15668983|ref|NP_247787.1| - 0.27 10.3 7.1 1.6 7.8 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4191) DUF2953 PF11167.3 gi|15668983|ref|NP_247787.1| - 8.5 6.3 8.2 29 4.6 0.5 3.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) TPR_11 PF13414.1 gi|15668984|ref|NP_247788.1| - 1.4e-51 171.9 54.9 7.7e-12 44.6 1.6 5.0 2 1 5 7 7 7 6 TPR repeat TPR_1 PF00515.23 gi|15668984|ref|NP_247788.1| - 7.4e-35 117.1 48.6 1.3e-08 34.0 0.3 7.7 6 2 1 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15668984|ref|NP_247788.1| - 2.6e-33 111.2 40.5 1.5e-07 30.8 0.1 7.6 6 2 1 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15668984|ref|NP_247788.1| - 3.8e-25 85.7 48.1 6e-05 22.5 0.2 8.2 6 2 2 8 8 7 7 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15668984|ref|NP_247788.1| - 1.1e-22 79.7 18.1 7.4e-09 35.4 0.1 6.1 2 1 4 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15668984|ref|NP_247788.1| - 4.7e-21 74.9 1.1 2.3e-07 31.2 0.0 4.6 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_6 PF13174.1 gi|15668984|ref|NP_247788.1| - 9.7e-19 66.4 12.2 7.4e-05 22.9 0.0 6.8 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15668984|ref|NP_247788.1| - 1e-17 62.4 10.7 0.0079 15.9 0.0 6.8 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15668984|ref|NP_247788.1| - 1.6e-16 59.2 0.0 0.0046 17.4 0.0 7.0 3 2 4 7 7 7 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15668984|ref|NP_247788.1| - 5.1e-16 58.7 9.7 6.9e-08 32.7 0.1 5.4 2 1 5 7 7 7 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15668984|ref|NP_247788.1| - 8.7e-14 50.5 26.7 0.00021 21.2 0.1 8.1 9 1 0 9 9 8 4 Tetratricopeptide repeat Apc3 PF12895.2 gi|15668984|ref|NP_247788.1| - 1.9e-13 50.3 34.6 3.8e-06 26.9 2.1 4.7 1 1 5 6 6 6 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.1 gi|15668984|ref|NP_247788.1| - 7.8e-09 35.2 0.0 1.8e-05 24.4 0.0 4.0 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|15668984|ref|NP_247788.1| - 1.8e-06 27.2 4.0 9.1e-06 24.9 2.8 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat ChAPs PF09295.5 gi|15668984|ref|NP_247788.1| - 0.00013 20.9 1.0 0.037 12.8 0.1 2.4 2 1 1 3 3 3 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_20 PF14561.1 gi|15668984|ref|NP_247788.1| - 0.00084 19.4 0.0 0.61 10.2 0.0 3.3 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|15668984|ref|NP_247788.1| - 0.0046 16.8 0.0 2 8.4 0.0 4.1 5 0 0 5 5 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|15668984|ref|NP_247788.1| - 0.0047 16.7 7.8 0.01 15.7 0.2 4.0 3 1 1 4 4 3 1 Fis1 C-terminal tetratricopeptide repeat PPR PF01535.15 gi|15668984|ref|NP_247788.1| - 0.037 13.9 8.1 5.6 7.1 0.2 5.0 4 0 0 4 4 4 0 PPR repeat MIT PF04212.13 gi|15668984|ref|NP_247788.1| - 0.041 13.7 19.7 3.9 7.4 0.1 6.1 6 1 1 7 7 6 0 MIT (microtubule interacting and transport) domain CAMP_factor PF07373.6 gi|15668984|ref|NP_247788.1| - 0.044 13.2 0.1 0.086 12.3 0.1 1.4 1 0 0 1 1 1 0 CAMP factor (Cfa) Foie-gras_1 PF11817.3 gi|15668984|ref|NP_247788.1| - 0.045 13.2 6.6 1.2 8.6 0.1 3.2 3 0 0 3 3 3 0 Foie gras liver health family 1 APP_E2 PF12925.2 gi|15668984|ref|NP_247788.1| - 0.089 12.3 1.1 0.88 9.1 0.2 2.3 2 1 0 2 2 2 0 E2 domain of amyloid precursor protein Pup PF05639.6 gi|15668984|ref|NP_247788.1| - 0.15 12.5 2.1 9.3 6.8 0.4 2.5 2 0 0 2 2 2 0 Pup-like protein SusD-like_3 PF14322.1 gi|15668984|ref|NP_247788.1| - 0.2 11.7 6.5 0.77 9.7 4.5 2.2 1 1 0 1 1 1 0 Starch-binding associating with outer membrane Sel1 PF08238.7 gi|15668984|ref|NP_247788.1| - 0.4 11.3 24.0 4.9 7.9 0.2 6.8 6 1 1 7 7 7 0 Sel1 repeat DUF2989 PF11207.3 gi|15668984|ref|NP_247788.1| - 0.78 9.1 11.2 12 5.3 6.1 3.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2989) Prefoldin PF02996.12 gi|15668984|ref|NP_247788.1| - 7.8 6.1 13.3 12 5.6 0.3 4.2 5 0 0 5 5 3 0 Prefoldin subunit SapB_1 PF05184.10 gi|15668984|ref|NP_247788.1| - 9.4 6.1 11.6 9.1 6.2 0.0 4.0 5 0 0 5 5 4 0 Saposin-like type B, region 1 AIRS_C PF02769.17 gi|15668985|ref|NP_247789.1| - 3.9e-12 46.4 0.0 1.8e-11 44.2 0.0 2.2 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|15668985|ref|NP_247789.1| - 3.7e-11 43.1 0.1 6.6e-11 42.3 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain BcrAD_BadFG PF01869.15 gi|15668986|ref|NP_247790.1| - 2.3e-67 227.1 7.1 3e-67 226.7 4.9 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Peptidase_M22 PF00814.20 gi|15668986|ref|NP_247790.1| - 0.0031 17.0 0.0 0.44 10.0 0.0 2.3 2 0 0 2 2 2 2 Glycoprotease family Hydant_A_N PF05378.8 gi|15668986|ref|NP_247790.1| - 0.013 15.0 1.6 0.013 15.0 1.1 2.7 3 0 0 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.1 gi|15668986|ref|NP_247790.1| - 0.031 14.1 1.8 0.16 11.7 0.5 2.8 2 1 0 2 2 2 0 Cell division protein FtsA FGGY_N PF00370.16 gi|15668986|ref|NP_247790.1| - 0.087 12.1 0.6 4 6.6 0.0 2.3 1 1 0 2 2 2 0 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.11 gi|15668986|ref|NP_247790.1| - 0.11 12.1 0.7 0.26 10.8 0.5 1.6 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Arch_ATPase PF01637.13 gi|15668987|ref|NP_247791.1| - 3e-84 282.3 7.9 5.3e-84 281.5 5.5 1.4 1 0 0 1 1 1 1 Archaeal ATPase AAA_14 PF13173.1 gi|15668987|ref|NP_247791.1| - 2.4e-10 40.4 7.4 1.4e-05 25.0 0.3 3.0 1 1 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15668987|ref|NP_247791.1| - 7.6e-07 29.3 0.0 1.6e-06 28.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_35 PF14516.1 gi|15668987|ref|NP_247791.1| - 1.3e-05 24.0 0.0 0.0045 15.6 0.0 2.7 2 1 0 2 2 2 2 AAA-like domain AAA PF00004.24 gi|15668987|ref|NP_247791.1| - 0.00015 21.9 0.1 0.019 15.1 0.0 2.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|15668987|ref|NP_247791.1| - 0.00034 20.7 0.0 0.0029 17.7 0.0 2.5 1 1 1 2 2 2 1 AAA domain Zot PF05707.7 gi|15668987|ref|NP_247791.1| - 0.0011 18.5 0.0 0.058 12.8 0.0 2.2 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_10 PF12846.2 gi|15668987|ref|NP_247791.1| - 0.0044 16.5 0.2 0.015 14.7 0.2 2.0 1 1 0 1 1 1 1 AAA-like domain MobB PF03205.9 gi|15668987|ref|NP_247791.1| - 0.0051 16.5 0.0 0.016 14.9 0.0 1.8 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B DUF2433 PF10360.4 gi|15668987|ref|NP_247791.1| - 0.013 15.8 0.1 0.057 13.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2433) cobW PF02492.14 gi|15668987|ref|NP_247791.1| - 0.017 14.5 0.0 0.058 12.8 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TK PF00265.13 gi|15668987|ref|NP_247791.1| - 0.028 13.9 0.1 0.079 12.5 0.1 1.9 1 1 1 2 2 2 0 Thymidine kinase MMR_HSR1 PF01926.18 gi|15668987|ref|NP_247791.1| - 0.12 12.3 0.7 0.32 10.9 0.1 2.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase DUF2113 PF09886.4 gi|15668988|ref|NP_247792.1| - 4e-58 195.6 4.9 4.5e-58 195.5 3.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) Hex_IIIa PF02455.11 gi|15668988|ref|NP_247792.1| - 0.1 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) Gp49 PF05973.9 gi|15668988|ref|NP_247792.1| - 0.11 12.5 0.5 15 5.6 0.0 2.9 1 1 1 2 2 2 0 Phage derived protein Gp49-like (DUF891) Exosortase_EpsH PF09721.5 gi|15668989|ref|NP_247793.1| - 0.026 13.7 2.6 0.035 13.3 1.8 1.1 1 0 0 1 1 1 0 Transmembrane exosortase (Exosortase_EpsH) DUF2157 PF09925.4 gi|15668989|ref|NP_247793.1| - 0.048 13.2 6.5 0.035 13.7 2.4 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) NfeD PF01957.13 gi|15668989|ref|NP_247793.1| - 2.5 8.2 6.5 0.31 11.1 1.5 1.6 2 0 0 2 2 2 0 NfeD-like C-terminal, partner-binding SdpI PF13630.1 gi|15668989|ref|NP_247793.1| - 4.9 6.9 8.9 0.77 9.5 1.6 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Radical_SAM PF04055.16 gi|15668990|ref|NP_247794.1| - 2e-22 80.1 4.5 2.8e-21 76.3 2.2 2.8 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15668990|ref|NP_247794.1| - 0.00031 20.7 1.1 0.0096 15.9 0.8 2.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Rota_NS53 PF00981.12 gi|15668990|ref|NP_247794.1| - 0.0018 17.0 0.1 0.0029 16.3 0.1 1.2 1 0 0 1 1 1 1 Rotavirus RNA-binding Protein 53 (NS53) Hydrolase_6 PF13344.1 gi|15668990|ref|NP_247794.1| - 0.013 15.3 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF1848 PF08902.6 gi|15668990|ref|NP_247794.1| - 0.018 14.5 1.5 0.35 10.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1848) CH PF00307.26 gi|15668990|ref|NP_247794.1| - 0.037 14.0 0.3 2.7 8.0 0.1 2.7 2 0 0 2 2 2 0 Calponin homology (CH) domain DUF366 PF04017.7 gi|15668991|ref|NP_247795.1| - 3e-77 258.0 6.3 3.6e-77 257.7 4.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF366) Peptidase_M24 PF00557.19 gi|15668992|ref|NP_247796.1| - 1.5e-55 187.9 0.0 1.9e-55 187.6 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|15668992|ref|NP_247796.1| - 1.1e-07 32.4 0.0 3.5e-07 30.7 0.0 1.9 1 1 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DUF98 PF01947.11 gi|15668993|ref|NP_247797.1| - 4.4e-21 75.1 0.4 1.5e-16 60.4 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF98) Chor_lyase PF04345.8 gi|15668993|ref|NP_247797.1| - 0.13 11.6 0.0 0.21 11.0 0.0 1.6 1 1 0 1 1 1 0 Chorismate lyase Radical_SAM PF04055.16 gi|15668994|ref|NP_247798.1| - 2.8e-21 76.3 0.3 1.2e-20 74.3 0.1 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|15668994|ref|NP_247798.1| - 6.5e-07 29.5 0.0 1.5e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DZR PF12773.2 gi|15668994|ref|NP_247798.1| - 0.015 15.0 0.1 0.015 15.0 0.1 2.7 3 0 0 3 3 3 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|15668994|ref|NP_247798.1| - 0.076 12.2 6.7 0.16 11.2 0.7 3.2 2 1 1 3 3 3 0 zinc-ribbon domain UPF0547 PF10571.4 gi|15668994|ref|NP_247798.1| - 0.14 11.8 0.2 0.14 11.8 0.1 3.2 3 2 0 3 3 3 0 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 gi|15668994|ref|NP_247798.1| - 0.15 11.6 0.1 0.15 11.6 0.1 3.4 3 0 0 3 3 3 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|15668994|ref|NP_247798.1| - 0.16 11.3 6.5 0.29 10.4 0.0 3.2 3 0 0 3 3 3 0 TFIIB zinc-binding zf-BED PF02892.10 gi|15668994|ref|NP_247798.1| - 1.9 8.2 10.4 5 6.9 0.9 3.4 3 0 0 3 3 3 0 BED zinc finger ATP-synt_D PF01813.12 gi|15668995|ref|NP_247799.1| - 0.00055 19.5 7.5 0.00094 18.7 5.2 1.3 1 1 0 1 1 1 1 ATP synthase subunit D DUF1664 PF07889.7 gi|15668995|ref|NP_247799.1| - 0.021 14.6 13.4 0.019 14.7 3.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Syntaxin-6_N PF09177.6 gi|15668995|ref|NP_247799.1| - 0.034 14.5 13.3 0.069 13.5 4.7 2.6 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF2461 PF09365.5 gi|15668995|ref|NP_247799.1| - 0.079 12.3 2.4 0.11 11.9 0.4 2.0 2 0 0 2 2 2 0 Conserved hypothetical protein (DUF2461) Baculo_PEP_C PF04513.7 gi|15668995|ref|NP_247799.1| - 0.14 11.9 6.8 0.043 13.6 2.0 1.9 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus THF_DHG_CYH PF00763.18 gi|15668995|ref|NP_247799.1| - 0.15 12.1 5.3 0.53 10.3 0.2 2.3 1 1 1 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3375 PF11855.3 gi|15668995|ref|NP_247799.1| - 0.15 10.7 7.4 0.048 12.4 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3375) G10 PF01125.12 gi|15668995|ref|NP_247799.1| - 0.16 11.4 3.4 0.32 10.5 2.4 1.4 1 0 0 1 1 1 0 G10 protein FlxA PF14282.1 gi|15668995|ref|NP_247799.1| - 0.26 11.2 34.4 0.069 13.1 15.4 2.5 2 1 0 2 2 2 0 FlxA-like protein Mitofilin PF09731.4 gi|15668995|ref|NP_247799.1| - 0.28 9.7 6.6 0.41 9.2 4.6 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein MIS13 PF08202.6 gi|15668995|ref|NP_247799.1| - 0.36 9.8 11.9 1 8.3 0.3 2.1 1 1 1 2 2 2 0 Mis12-Mtw1 protein family DUF3251 PF11622.3 gi|15668995|ref|NP_247799.1| - 0.38 10.1 15.2 0.33 10.3 5.9 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3251) DUF1515 PF07439.6 gi|15668995|ref|NP_247799.1| - 0.41 10.4 5.5 3 7.6 0.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) GvpK PF05121.7 gi|15668995|ref|NP_247799.1| - 0.54 10.1 9.3 2.3 8.1 1.6 2.8 2 1 1 3 3 3 0 Gas vesicle protein K M_domain PF12938.2 gi|15668995|ref|NP_247799.1| - 0.54 10.0 9.3 0.026 14.3 2.7 1.6 2 0 0 2 2 2 0 M domain of GW182 WXG100 PF06013.7 gi|15668995|ref|NP_247799.1| - 0.55 10.2 6.9 3.8 7.5 2.5 3.0 3 1 0 3 3 3 0 Proteins of 100 residues with WXG COG2 PF06148.6 gi|15668995|ref|NP_247799.1| - 0.65 9.8 7.5 2.3 8.0 2.4 2.2 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DNA_repr_REX1B PF14966.1 gi|15668995|ref|NP_247799.1| - 0.68 10.3 9.7 0.21 11.9 2.4 2.4 1 1 0 2 2 2 0 DNA repair REX1-B Pico_P2B PF01552.12 gi|15668995|ref|NP_247799.1| - 0.79 9.9 0.1 0.79 9.9 0.0 2.5 2 1 0 2 2 2 0 Picornavirus 2B protein AAA_13 PF13166.1 gi|15668995|ref|NP_247799.1| - 0.8 8.0 15.4 0.91 7.9 10.7 1.1 1 0 0 1 1 1 0 AAA domain Cbl_N PF02262.11 gi|15668995|ref|NP_247799.1| - 0.87 9.3 8.5 0.17 11.5 1.0 2.3 1 1 1 2 2 2 0 CBL proto-oncogene N-terminal domain 1 NPV_P10 PF05531.7 gi|15668995|ref|NP_247799.1| - 0.95 9.7 11.9 0.2 11.9 4.5 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein THOC7 PF05615.8 gi|15668995|ref|NP_247799.1| - 0.98 9.6 19.2 0.76 10.0 3.6 3.1 2 1 1 3 3 3 0 Tho complex subunit 7 Sec5 PF15469.1 gi|15668995|ref|NP_247799.1| - 1.1 8.9 11.4 4.8 6.8 3.7 2.4 1 1 1 2 2 2 0 Exocyst complex component Sec5 SecA_DEAD PF07517.9 gi|15668995|ref|NP_247799.1| - 1.3 8.2 6.3 1.7 7.8 4.4 1.1 1 0 0 1 1 1 0 SecA DEAD-like domain DUF3347 PF11827.3 gi|15668995|ref|NP_247799.1| - 1.4 8.8 8.6 0.51 10.3 4.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) DUF948 PF06103.6 gi|15668995|ref|NP_247799.1| - 1.7 8.5 10.1 0.39 10.6 3.6 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF972 PF06156.8 gi|15668995|ref|NP_247799.1| - 1.8 8.9 15.0 0.34 11.2 4.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF972) Blo-t-5 PF11642.3 gi|15668995|ref|NP_247799.1| - 1.9 8.2 10.2 0.31 10.8 2.8 2.2 2 0 0 2 2 2 0 Mite allergen Blo t 5 V-SNARE PF05008.10 gi|15668995|ref|NP_247799.1| - 2 8.6 17.4 0.24 11.5 3.3 3.4 2 2 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus ISG65-75 PF11727.3 gi|15668995|ref|NP_247799.1| - 2.1 7.3 6.9 2.1 7.3 4.0 1.5 1 1 0 1 1 1 0 Invariant surface glycoprotein Mod_r PF07200.8 gi|15668995|ref|NP_247799.1| - 2.3 8.1 15.2 0.45 10.4 6.2 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein PIN_2 PF10130.4 gi|15668995|ref|NP_247799.1| - 2.4 8.2 9.7 1.8 8.5 2.8 2.1 1 1 1 2 2 2 0 PIN domain Syntaxin_2 PF14523.1 gi|15668995|ref|NP_247799.1| - 2.5 8.1 18.5 0.51 10.4 8.5 2.2 1 1 0 2 2 2 0 Syntaxin-like protein DUF3800 PF12686.2 gi|15668995|ref|NP_247799.1| - 2.6 7.6 8.4 3.1 7.3 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) DUF1845 PF08900.6 gi|15668995|ref|NP_247799.1| - 2.8 7.1 9.7 1.9 7.6 1.9 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1845) NuA4 PF09340.5 gi|15668995|ref|NP_247799.1| - 3.2 7.4 13.5 0.75 9.4 0.3 3.3 1 1 1 3 3 3 0 Histone acetyltransferase subunit NuA4 FadA PF09403.5 gi|15668995|ref|NP_247799.1| - 3.2 7.7 13.4 1.3 8.9 2.7 2.7 1 1 1 2 2 2 0 Adhesion protein FadA SPX PF03105.14 gi|15668995|ref|NP_247799.1| - 3.5 7.3 10.0 2.4 7.8 5.6 1.6 1 1 1 2 2 2 0 SPX domain TBPIP PF07106.8 gi|15668995|ref|NP_247799.1| - 4.2 6.9 19.6 0.47 9.9 7.1 2.2 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) COG5 PF10392.4 gi|15668995|ref|NP_247799.1| - 4.4 7.2 10.0 1.2 9.1 3.7 2.0 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Uds1 PF15456.1 gi|15668995|ref|NP_247799.1| - 4.4 7.3 7.5 3.8 7.5 0.9 2.7 1 1 1 2 2 2 0 Up-regulated During Septation DUF2779 PF11074.3 gi|15668995|ref|NP_247799.1| - 4.5 7.3 7.4 14 5.7 5.1 1.9 1 1 0 1 1 1 0 Domain of unknown function(DUF2779) Fzo_mitofusin PF04799.8 gi|15668995|ref|NP_247799.1| - 4.5 6.6 14.3 1 8.7 2.9 2.8 1 1 2 3 3 3 0 fzo-like conserved region CENP-Q PF13094.1 gi|15668995|ref|NP_247799.1| - 4.9 7.1 8.6 20 5.1 5.4 2.0 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF4391 PF14335.1 gi|15668995|ref|NP_247799.1| - 5.6 6.2 20.1 9.7 5.5 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4391) DUF4618 PF15397.1 gi|15668995|ref|NP_247799.1| - 6 6.1 19.7 0.12 11.7 3.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF2802 PF10975.3 gi|15668995|ref|NP_247799.1| - 8.4 6.2 18.2 1.1 9.1 4.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2802) DUF2746 PF10874.3 gi|15668995|ref|NP_247799.1| - 9 6.5 10.3 1 9.6 0.3 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF2746) Allexi_40kDa PF05549.6 gi|15668995|ref|NP_247799.1| - 9.5 5.4 9.9 2.4 7.3 4.3 1.7 1 1 0 2 2 2 0 Allexivirus 40kDa protein Acylphosphatase PF00708.13 gi|15668996|ref|NP_247800.1| - 2.2e-15 56.5 0.1 9.6e-15 54.4 0.0 1.8 2 0 0 2 2 2 1 Acylphosphatase KxDL PF10241.4 gi|15668996|ref|NP_247800.1| - 0.053 13.4 1.9 0.59 10.0 0.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein Prefoldin_2 PF01920.15 gi|15668996|ref|NP_247800.1| - 9.8 6.0 11.7 2.2 8.0 1.4 2.8 2 1 0 2 2 2 0 Prefoldin subunit AMMECR1 PF01871.12 gi|15668997|ref|NP_247801.1| - 1.1e-63 213.3 0.0 1.4e-63 213.1 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 VWA_2 PF13519.1 gi|15668998|ref|NP_247802.1| - 2.1e-09 37.7 0.0 4.4e-09 36.6 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.4 gi|15668998|ref|NP_247802.1| - 5e-05 23.3 0.0 0.00013 21.9 0.0 1.7 1 0 0 1 1 1 1 VWA-like domain (DUF2201) VWA PF00092.23 gi|15668998|ref|NP_247802.1| - 6.3e-05 22.7 2.4 7.4e-05 22.5 0.2 2.2 3 0 0 3 3 3 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|15668998|ref|NP_247802.1| - 0.00075 18.6 0.0 0.0013 17.9 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein HTH_38 PF13936.1 gi|15668998|ref|NP_247802.1| - 0.0052 16.3 3.3 0.011 15.2 0.1 3.0 4 0 0 4 4 4 1 Helix-turn-helix domain THP2 PF09432.5 gi|15668998|ref|NP_247802.1| - 0.65 9.8 4.8 0.84 9.5 0.4 2.8 1 1 2 3 3 3 0 Tho complex subunit THP2 RasGAP PF00616.14 gi|15668998|ref|NP_247802.1| - 1.4 8.5 8.6 0.32 10.6 3.5 1.7 2 1 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase AAA_5 PF07728.9 gi|15668999|ref|NP_247803.1| - 1.8e-26 92.5 0.0 4.8e-26 91.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.24 gi|15668999|ref|NP_247803.1| - 0.00035 20.7 0.1 0.001 19.2 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.18 gi|15668999|ref|NP_247803.1| - 0.001 17.9 0.0 0.029 13.1 0.0 2.5 3 0 0 3 3 3 1 MCM2/3/5 family AAA_3 PF07726.6 gi|15668999|ref|NP_247803.1| - 0.0011 18.5 0.0 0.0019 17.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 gi|15668999|ref|NP_247803.1| - 0.0031 16.7 0.0 0.0062 15.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 Viral_helicase1 PF01443.13 gi|15668999|ref|NP_247803.1| - 0.0072 15.8 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.1 gi|15668999|ref|NP_247803.1| - 0.1 12.5 0.0 0.26 11.2 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain TP_methylase PF00590.15 gi|15669000|ref|NP_247804.1| - 3.4e-31 108.6 0.0 3.9e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DS PF01916.12 gi|15669001|ref|NP_247805.1| - 2.2e-148 493.2 0.5 2.7e-148 492.9 0.3 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase ATP-grasp_3 PF02655.9 gi|15669002|ref|NP_247806.1| - 3.1e-40 137.6 0.5 4.7e-40 137.0 0.3 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|15669002|ref|NP_247806.1| - 1e-10 41.6 0.0 1.7e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|15669002|ref|NP_247806.1| - 1.5e-05 23.9 0.1 5.2e-05 22.1 0.0 1.7 1 1 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.6 gi|15669002|ref|NP_247806.1| - 5.8e-05 22.6 0.5 0.00017 21.1 0.3 1.8 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|15669002|ref|NP_247806.1| - 0.0045 16.4 1.2 0.045 13.1 0.2 2.4 2 1 0 2 2 2 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.12 gi|15669002|ref|NP_247806.1| - 0.0066 15.7 0.1 0.011 15.0 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Ribosomal_L38e PF01781.13 gi|15669002|ref|NP_247806.1| - 0.0098 15.6 3.8 5.2 6.8 0.0 3.5 2 1 1 3 3 3 1 Ribosomal L38e protein family DUF4343 PF14243.1 gi|15669002|ref|NP_247806.1| - 0.016 15.0 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4343) ATPgrasp_ST PF14397.1 gi|15669002|ref|NP_247806.1| - 0.11 11.5 0.2 0.11 11.5 0.1 2.9 3 1 1 4 4 4 0 Sugar-transfer associated ATP-grasp KH_2 PF07650.12 gi|15669003|ref|NP_247807.1| - 0.033 13.7 5.0 0.037 13.5 1.7 2.5 2 1 0 2 2 2 0 KH domain Phage_Gp111 PF07410.6 gi|15669003|ref|NP_247807.1| - 0.072 13.2 0.5 0.17 12.0 0.3 1.6 1 0 0 1 1 1 0 Streptococcus thermophilus bacteriophage Gp111 protein Kri1 PF05178.7 gi|15669003|ref|NP_247807.1| - 0.5 10.6 3.2 1.7 8.9 2.2 2.0 1 1 0 1 1 1 0 KRI1-like family PS_Dcarbxylase PF02666.10 gi|15669004|ref|NP_247808.1| - 2.8e-42 144.3 0.2 3.3e-42 144.0 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Peptidase_M23 PF01551.17 gi|15669004|ref|NP_247808.1| - 0.00012 22.0 1.9 3.8 7.6 0.1 3.5 2 1 1 3 3 3 3 Peptidase family M23 Biotin_lipoyl PF00364.17 gi|15669004|ref|NP_247808.1| - 0.00054 19.5 0.3 0.93 9.1 0.0 3.3 4 0 0 4 4 4 2 Biotin-requiring enzyme RnfC_N PF13375.1 gi|15669004|ref|NP_247808.1| - 0.0065 16.1 0.3 5 6.9 0.0 3.2 3 1 1 4 4 4 2 RnfC Barrel sandwich hybrid domain Apocytochr_F_C PF01333.14 gi|15669004|ref|NP_247808.1| - 0.054 13.3 0.1 3 7.7 0.1 3.0 2 1 0 2 2 2 0 Apocytochrome F, C-terminal tRNA_anti-codon PF01336.20 gi|15669005|ref|NP_247809.1| - 1e-15 57.3 0.8 2.7e-11 43.1 0.2 2.3 1 1 1 2 2 2 2 OB-fold nucleic acid binding domain DUF4131 PF13567.1 gi|15669005|ref|NP_247809.1| - 0.00014 21.3 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) Ada_Zn_binding PF02805.11 gi|15669005|ref|NP_247809.1| - 0.0029 17.1 0.0 0.0087 15.6 0.0 1.9 1 1 0 1 1 1 1 Metal binding domain of Ada Peptidase_S24 PF00717.18 gi|15669005|ref|NP_247809.1| - 0.067 12.8 1.0 1.5 8.5 0.1 2.8 3 1 0 3 3 3 0 Peptidase S24-like FTCD_C PF04961.7 gi|15669006|ref|NP_247810.1| - 0.0015 17.9 0.2 0.0018 17.6 0.1 1.1 1 0 0 1 1 1 1 Formiminotransferase-cyclodeaminase LETM1 PF07766.8 gi|15669006|ref|NP_247810.1| - 0.022 13.7 0.5 0.024 13.6 0.3 1.1 1 0 0 1 1 1 0 LETM1-like protein VASP_tetra PF08776.6 gi|15669006|ref|NP_247810.1| - 2.9 7.2 7.9 12 5.3 5.5 2.1 1 1 0 1 1 1 0 VASP tetramerisation domain Arch_ATPase PF01637.13 gi|15669007|ref|NP_247811.1| - 2.2e-11 43.9 0.1 2.5e-11 43.7 0.1 1.0 1 0 0 1 1 1 1 Archaeal ATPase ADPrib_exo_Tox PF03496.9 gi|15669007|ref|NP_247811.1| - 0.1 11.8 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme Arch_ATPase PF01637.13 gi|15669008|ref|NP_247812.1| - 3.4e-12 46.5 0.3 3.8e-12 46.4 0.2 1.1 1 0 0 1 1 1 1 Archaeal ATPase S_layer_N PF05123.7 gi|15669009|ref|NP_247813.1| - 3.1e-97 325.6 20.2 3.1e-97 325.6 14.0 2.2 2 0 0 2 2 2 1 S-layer like family, N-terminal region S_layer_C PF05124.7 gi|15669009|ref|NP_247813.1| - 2.6e-83 279.0 16.0 2.6e-83 279.0 11.1 3.0 2 1 1 3 3 3 1 S-layer like family, C-terminal region CbiA PF01656.18 gi|15669010|ref|NP_247814.1| - 4.5e-41 140.4 0.5 5.4e-41 140.1 0.4 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|15669010|ref|NP_247814.1| - 1.7e-11 43.8 0.6 7.2e-05 22.0 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|15669010|ref|NP_247814.1| - 1.5e-08 34.0 2.0 1.8e-05 23.9 0.0 2.4 3 0 0 3 3 3 2 Anion-transporting ATPase AAA_26 PF13500.1 gi|15669010|ref|NP_247814.1| - 1.9e-06 27.6 1.6 0.00065 19.3 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_31 PF13614.1 gi|15669010|ref|NP_247814.1| - 4.6e-05 23.4 0.0 0.004 17.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|15669010|ref|NP_247814.1| - 9.2e-05 22.2 1.4 0.0014 18.3 0.0 2.3 2 0 0 2 2 2 1 NTPase YhjQ PF06564.7 gi|15669010|ref|NP_247814.1| - 0.00014 21.3 0.0 0.16 11.3 0.0 2.1 2 0 0 2 2 2 2 YhjQ protein AAA_16 PF13191.1 gi|15669010|ref|NP_247814.1| - 0.00081 19.4 0.0 0.0019 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|15669010|ref|NP_247814.1| - 0.00081 20.2 0.9 0.0035 18.1 0.6 2.3 1 1 0 1 1 1 1 AAA domain PTS_IIB PF02302.12 gi|15669010|ref|NP_247814.1| - 0.0024 18.3 0.1 1.5 9.3 0.0 2.7 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit ParA PF10609.4 gi|15669010|ref|NP_247814.1| - 0.007 16.2 0.4 0.015 15.1 0.1 1.7 2 0 0 2 2 1 1 ParA/MinD ATPase like AAA_22 PF13401.1 gi|15669010|ref|NP_247814.1| - 0.013 15.6 0.2 0.19 11.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|15669010|ref|NP_247814.1| - 0.019 14.4 0.1 0.056 12.9 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_10 PF12846.2 gi|15669010|ref|NP_247814.1| - 0.025 14.0 0.2 0.12 11.8 0.1 1.9 1 1 0 1 1 1 0 AAA-like domain TrwB_AAD_bind PF10412.4 gi|15669010|ref|NP_247814.1| - 0.03 12.9 0.0 1.5 7.3 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_30 PF13604.1 gi|15669010|ref|NP_247814.1| - 0.046 13.3 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.9 gi|15669010|ref|NP_247814.1| - 0.056 13.1 0.3 0.33 10.6 0.0 2.2 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|15669010|ref|NP_247814.1| - 0.077 11.7 0.3 0.15 10.8 0.0 1.7 2 0 0 2 2 2 0 ArgK protein IstB_IS21 PF01695.12 gi|15669010|ref|NP_247814.1| - 0.096 12.0 0.1 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF87 PF01935.12 gi|15669010|ref|NP_247814.1| - 0.14 11.9 4.0 0.62 9.8 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function DUF87 AAA_18 PF13238.1 gi|15669010|ref|NP_247814.1| - 0.16 12.3 1.7 0.19 12.0 0.0 2.0 2 1 0 2 2 2 0 AAA domain Radical_SAM PF04055.16 gi|15669011|ref|NP_247815.1| - 8.3e-28 97.6 0.3 1.2e-27 97.0 0.2 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.8 gi|15669011|ref|NP_247815.1| - 7e-27 93.6 0.1 2.7e-26 91.7 0.0 1.9 2 0 0 2 2 2 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.1 gi|15669011|ref|NP_247815.1| - 1.6e-12 47.7 0.2 2.6e-12 47.0 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|15669011|ref|NP_247815.1| - 6e-11 42.4 0.1 1.1e-10 41.5 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain FKBP_C PF00254.23 gi|15669012|ref|NP_247816.1| - 7.1e-17 61.2 0.0 1.5e-16 60.1 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase YajC PF02699.10 gi|15669012|ref|NP_247816.1| - 0.1 12.2 0.9 0.24 11.1 0.2 1.9 2 0 0 2 2 2 0 Preprotein translocase subunit NfeD PF01957.13 gi|15669013|ref|NP_247817.1| - 7.7e-21 74.7 8.2 1.1e-20 74.1 5.7 1.3 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding DUF3784 PF12650.2 gi|15669013|ref|NP_247817.1| - 8.4 6.4 11.9 0.93 9.4 4.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) Band_7 PF01145.20 gi|15669014|ref|NP_247818.1| - 3.1e-38 131.4 3.0 3.5e-38 131.2 2.1 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family FlgN PF05130.7 gi|15669014|ref|NP_247818.1| - 0.016 15.4 0.8 0.023 14.9 0.6 1.2 1 0 0 1 1 1 0 FlgN protein Band_7_1 PF13421.1 gi|15669014|ref|NP_247818.1| - 0.027 14.0 0.3 0.035 13.6 0.2 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family eRF1_2 PF03464.10 gi|15669016|ref|NP_247820.1| - 1.8e-39 135.1 0.0 4.6e-39 133.7 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|15669016|ref|NP_247820.1| - 7e-34 116.4 2.0 2.2e-33 114.8 1.4 1.9 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|15669016|ref|NP_247820.1| - 2e-24 85.6 0.0 4.1e-24 84.6 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 1 Lar_restr_allev PF14354.1 gi|15669016|ref|NP_247820.1| - 0.003 17.8 0.3 0.51 10.6 0.0 2.4 2 0 0 2 2 2 1 Restriction alleviation protein Lar HypA PF01155.14 gi|15669016|ref|NP_247820.1| - 0.034 13.8 0.6 0.074 12.7 0.4 1.6 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family RNA_POL_M_15KD PF02150.11 gi|15669016|ref|NP_247820.1| - 0.048 13.3 1.4 0.46 10.2 0.1 2.4 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DUF3396 PF11876.3 gi|15669016|ref|NP_247820.1| - 0.053 12.6 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3396) DUF2969 PF11184.3 gi|15669016|ref|NP_247820.1| - 0.096 12.7 0.6 0.23 11.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2969) SIR2 PF02146.12 gi|15669016|ref|NP_247820.1| - 0.11 12.2 0.1 0.2 11.3 0.1 1.4 1 0 0 1 1 1 0 Sir2 family zinc_ribbon_5 PF13719.1 gi|15669016|ref|NP_247820.1| - 0.12 11.9 0.2 9.6 5.8 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain NAD_synthase PF02540.12 gi|15669017|ref|NP_247821.1| - 5.7e-05 22.1 0.2 0.00017 20.5 0.0 1.9 3 0 0 3 3 3 1 NAD synthase ATP_bind_3 PF01171.15 gi|15669017|ref|NP_247821.1| - 0.00019 21.0 0.1 0.0013 18.2 0.1 2.3 1 1 0 2 2 2 1 PP-loop family PAPS_reduct PF01507.14 gi|15669017|ref|NP_247821.1| - 0.0013 18.5 0.1 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.16 gi|15669017|ref|NP_247821.1| - 0.01 15.3 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 0 Asparagine synthase ThiI PF02568.9 gi|15669017|ref|NP_247821.1| - 0.054 12.9 5.0 0.29 10.5 0.1 3.1 2 2 1 3 3 3 0 Thiamine biosynthesis protein (ThiI) DHH PF01368.15 gi|15669018|ref|NP_247822.1| - 2.6e-14 53.1 0.6 4.7e-14 52.2 0.4 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|15669018|ref|NP_247822.1| - 4.8e-14 51.7 2.9 6.9e-14 51.3 1.1 2.0 2 0 0 2 2 2 1 DHHA1 domain Cauli_AT PF03233.8 gi|15669018|ref|NP_247822.1| - 0.13 11.9 4.3 0.3 10.7 0.1 3.0 3 0 0 3 3 3 0 Aphid transmission protein NRDD PF13597.1 gi|15669019|ref|NP_247823.1| - 1.4e-139 465.6 8.3 1.1e-54 185.5 0.1 3.3 3 0 0 3 3 3 3 Anaerobic ribonucleoside-triphosphate reductase LAGLIDADG_3 PF14528.1 gi|15669019|ref|NP_247823.1| - 2e-26 92.0 25.0 4.6e-10 39.5 0.2 7.0 7 0 0 7 7 7 4 LAGLIDADG-like domain ATP-cone PF03477.11 gi|15669019|ref|NP_247823.1| - 1.7e-17 63.5 12.9 3e-10 40.3 0.3 3.7 3 0 0 3 3 3 2 ATP cone domain Hom_end PF05204.9 gi|15669019|ref|NP_247823.1| - 5.4e-12 45.6 0.3 0.00013 21.8 0.0 3.8 3 0 0 3 3 3 2 Homing endonuclease Hint PF01079.15 gi|15669019|ref|NP_247823.1| - 0.00067 18.9 0.0 0.0058 15.8 0.0 2.1 2 0 0 2 2 2 1 Hint module Class_IIIsignal PF04021.7 gi|15669020|ref|NP_247824.1| - 3e-10 39.4 0.6 6e-10 38.4 0.4 1.6 1 0 0 1 1 1 1 Class III signal peptide TarH PF02203.10 gi|15669020|ref|NP_247824.1| - 0.073 12.8 0.4 0.095 12.5 0.3 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF3333 PF11812.3 gi|15669020|ref|NP_247824.1| - 0.075 13.0 0.6 0.23 11.4 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) WRKY PF03106.10 gi|15669022|ref|NP_247826.1| - 0.078 12.8 1.5 0.35 10.7 0.1 2.4 2 0 0 2 2 2 0 WRKY DNA -binding domain DUF515 PF04415.7 gi|15669023|ref|NP_247827.1| - 5e-131 436.7 32.7 1.1e-99 333.4 17.6 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF515) GA PF01468.12 gi|15669023|ref|NP_247827.1| - 0.00064 19.8 3.3 0.00064 19.8 2.3 2.4 3 0 0 3 3 3 1 GA module Acetyltransf_11 PF13720.1 gi|15669023|ref|NP_247827.1| - 0.0012 19.0 1.8 0.042 14.0 0.2 3.5 2 1 1 3 3 3 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Chordopox_A13L PF05961.6 gi|15669023|ref|NP_247827.1| - 0.0013 18.6 1.8 0.004 17.0 0.5 2.4 1 1 0 2 2 2 1 Chordopoxvirus A13L protein EcsB PF05975.7 gi|15669023|ref|NP_247827.1| - 0.0067 14.9 0.2 0.0098 14.3 0.2 1.1 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB Class_IIIsignal PF04021.7 gi|15669024|ref|NP_247828.1| - 1.1e-10 40.8 0.7 2.5e-10 39.7 0.5 1.6 1 0 0 1 1 1 1 Class III signal peptide DUF2953 PF11167.3 gi|15669024|ref|NP_247828.1| - 5.5 6.9 6.7 8.2 6.4 0.3 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF2953) Arc_PepC PF06819.6 gi|15669025|ref|NP_247829.1| - 9.7e-38 128.5 9.5 9.7e-38 128.5 6.6 1.8 2 0 0 2 2 2 1 Archaeal Peptidase A24 C-terminal Domain Peptidase_A24 PF01478.13 gi|15669025|ref|NP_247829.1| - 1.4e-11 44.4 12.3 1.4e-11 44.4 8.5 3.3 3 1 0 3 3 3 1 Type IV leader peptidase family zf-like PF04071.7 gi|15669026|ref|NP_247830.1| - 2.5e-34 116.8 8.1 3.2e-34 116.4 5.6 1.1 1 0 0 1 1 1 1 Cysteine-rich small domain HD PF01966.17 gi|15669027|ref|NP_247831.1| - 5.7e-16 58.6 1.9 1.4e-15 57.3 1.3 1.6 1 0 0 1 1 1 1 HD domain TraI_2 PF07514.6 gi|15669027|ref|NP_247831.1| - 1.4e-07 30.6 0.2 2.1e-06 26.7 0.1 2.5 2 1 0 2 2 2 1 Putative helicase dTMP_synthase PF02593.9 gi|15669028|ref|NP_247832.1| - 1e-63 214.6 0.2 1.1e-63 214.4 0.2 1.0 1 0 0 1 1 1 1 Thymidylate synthase RhoGEF PF00621.15 gi|15669028|ref|NP_247832.1| - 0.091 12.6 0.2 0.12 12.2 0.2 1.2 1 0 0 1 1 1 0 RhoGEF domain DNA_primase_S PF01896.14 gi|15669029|ref|NP_247833.1| - 4.7e-15 55.6 2.1 7.1e-15 55.0 1.4 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase small subunit D5_N PF08706.6 gi|15669029|ref|NP_247833.1| - 0.03 14.4 1.0 0.03 14.4 0.7 2.1 2 1 1 3 3 3 0 D5 N terminal like DUF4428 PF14471.1 gi|15669029|ref|NP_247833.1| - 0.039 13.7 0.8 0.039 13.7 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) Hydantoinase_A PF01968.13 gi|15669030|ref|NP_247834.1| - 1.7e-32 112.6 0.0 5.5e-31 107.7 0.0 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.1 gi|15669030|ref|NP_247834.1| - 0.0023 16.3 0.0 0.089 11.0 0.0 2.1 2 0 0 2 2 2 2 MutL protein Hydant_A_N PF05378.8 gi|15669030|ref|NP_247834.1| - 0.0078 15.7 4.2 0.59 9.6 0.1 3.6 3 1 1 4 4 4 1 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.1 gi|15669030|ref|NP_247834.1| - 0.061 13.1 1.9 2.6 7.8 0.1 3.2 2 1 0 2 2 2 0 Cell division protein FtsA Mer2 PF09074.5 gi|15669030|ref|NP_247834.1| - 0.076 12.9 1.1 0.19 11.6 0.1 1.9 2 0 0 2 2 2 0 Mer2 OKR_DC_1_N PF03709.10 gi|15669030|ref|NP_247834.1| - 0.097 12.7 0.6 0.93 9.5 0.0 2.2 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain DUF512 PF04459.7 gi|15669031|ref|NP_247835.1| - 7.4e-32 110.0 0.1 1.3e-31 109.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF512) Radical_SAM PF04055.16 gi|15669031|ref|NP_247835.1| - 2.4e-14 53.8 18.1 4.1e-11 43.3 8.9 3.8 2 2 0 2 2 2 2 Radical SAM superfamily MCR_beta PF02241.13 gi|15669032|ref|NP_247836.1| - 1.6e-160 532.1 4.9 2.2e-160 531.7 3.4 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|15669032|ref|NP_247836.1| - 9.9e-94 311.9 1.8 1.8e-93 311.0 1.2 1.4 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain MCR_D PF02505.9 gi|15669033|ref|NP_247837.1| - 2.5e-72 241.4 0.2 2.9e-72 241.2 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_C PF04609.7 gi|15669034|ref|NP_247838.1| - 3.4e-47 160.4 7.1 2.1e-41 141.5 2.2 3.1 1 1 1 2 2 2 2 Methyl-coenzyme M reductase operon protein C MCR_gamma PF02240.11 gi|15669035|ref|NP_247839.1| - 2.9e-145 481.9 0.9 3.3e-145 481.7 0.6 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_alpha_N PF02745.10 gi|15669036|ref|NP_247840.1| - 3.7e-167 554.2 0.1 4.6e-167 553.8 0.1 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|15669036|ref|NP_247840.1| - 6.2e-66 220.1 3.6 1.3e-65 219.1 2.5 1.6 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Lipoprotein_3 PF00938.12 gi|15669036|ref|NP_247840.1| - 0.04 13.6 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 Lipoprotein MtrE PF04206.7 gi|15669037|ref|NP_247841.1| - 2.4e-141 469.4 15.3 2.7e-141 469.2 10.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E DUF2929 PF11151.3 gi|15669037|ref|NP_247841.1| - 5.5 7.1 17.3 0.34 11.0 0.9 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2929) DUF3816 PF12822.2 gi|15669037|ref|NP_247841.1| - 5.7 6.7 22.2 0.86 9.4 1.3 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF3816) MtrD PF04207.7 gi|15669038|ref|NP_247842.1| - 1.6e-108 361.2 27.5 1.8e-108 361.0 19.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrC PF04211.8 gi|15669039|ref|NP_247843.1| - 1.9e-123 410.6 21.9 2.1e-123 410.4 15.2 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C Phage_holin_3 PF05106.7 gi|15669039|ref|NP_247843.1| - 0.15 12.0 0.1 0.15 12.0 0.0 2.9 1 1 2 3 3 3 0 Phage holin family (Lysis protein S) DUF997 PF06196.7 gi|15669039|ref|NP_247843.1| - 0.17 11.3 5.3 0.087 12.3 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF997) DUF4131 PF13567.1 gi|15669039|ref|NP_247843.1| - 0.35 10.2 12.4 11 5.4 3.5 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2456 PF10445.4 gi|15669039|ref|NP_247843.1| - 5.5 6.9 10.3 1.1 9.2 1.4 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2456) MtrB PF05440.7 gi|15669040|ref|NP_247844.1| - 4.5e-43 145.2 0.0 5e-43 145.0 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrA PF04208.9 gi|15669041|ref|NP_247845.1| - 1.4e-89 298.2 1.7 1.7e-89 297.8 1.2 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.5 gi|15669041|ref|NP_247845.1| - 0.071 12.3 0.3 0.15 11.3 0.2 1.6 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrF PF09472.5 gi|15669042|ref|NP_247846.1| - 2.2e-27 94.0 0.1 2.4e-27 93.9 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrG PF04210.8 gi|15669043|ref|NP_247847.1| - 2.8e-35 119.8 0.9 3.4e-35 119.5 0.7 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G HalX PF08663.5 gi|15669043|ref|NP_247847.1| - 0.0014 18.5 0.2 0.0018 18.2 0.1 1.1 1 0 0 1 1 1 1 HalX domain YqfD PF06898.6 gi|15669043|ref|NP_247847.1| - 0.013 14.2 0.0 0.013 14.1 0.0 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Ribosomal_L29 PF00831.18 gi|15669043|ref|NP_247847.1| - 0.035 13.7 0.5 0.049 13.3 0.3 1.2 1 0 0 1 1 1 0 Ribosomal L29 protein Foamy_virus_ENV PF03408.9 gi|15669043|ref|NP_247847.1| - 0.079 10.4 0.1 0.08 10.4 0.1 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein DUF2605 PF10792.4 gi|15669043|ref|NP_247847.1| - 0.098 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2605) MtrH PF02007.13 gi|161579524|ref|NP_247848.2| - 1.6e-153 509.9 0.8 1.9e-153 509.7 0.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit V4R PF02830.13 gi|15669045|ref|NP_247849.1| - 8e-19 67.2 2.3 8e-19 67.2 1.6 1.6 2 0 0 2 2 2 1 V4R domain DUF2507 PF10702.4 gi|15669045|ref|NP_247849.1| - 1.1e-06 28.3 0.0 2.1e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2507) DUF2096 PF09869.4 gi|15669046|ref|NP_247850.1| - 1.3e-71 239.9 3.9 1.5e-71 239.7 2.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) SLS PF14611.1 gi|15669046|ref|NP_247850.1| - 0.045 13.1 0.0 0.076 12.4 0.0 1.5 1 1 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator KH_1 PF00013.24 gi|15669046|ref|NP_247850.1| - 0.1 12.2 1.6 2.3 7.9 1.1 2.3 1 1 0 1 1 1 0 KH domain OrfB_Zn_ribbon PF07282.6 gi|15669047|ref|NP_247851.1| - 3.5e-25 87.4 0.1 4.3e-25 87.1 0.0 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.1 gi|15669047|ref|NP_247851.1| - 0.0036 16.4 0.3 0.086 12.0 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|15669047|ref|NP_247851.1| - 0.011 15.5 0.6 0.065 13.0 0.4 2.0 1 1 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|15669047|ref|NP_247851.1| - 0.012 15.0 0.6 0.081 12.4 0.0 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn_Tnp_IS1595 PF12760.2 gi|15669047|ref|NP_247851.1| - 0.013 15.3 0.5 0.02 14.7 0.3 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Yippee-Mis18 PF03226.9 gi|15669047|ref|NP_247851.1| - 0.085 12.9 0.3 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zinc_ribbon_2 PF13240.1 gi|15669047|ref|NP_247851.1| - 0.11 12.0 3.1 0.36 10.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|15669047|ref|NP_247851.1| - 0.13 11.9 0.6 1.6 8.4 0.0 2.1 2 0 0 2 2 2 0 Nudix N-terminal zf-TFIIB PF13453.1 gi|15669047|ref|NP_247851.1| - 0.13 11.4 1.0 0.25 10.5 0.7 1.4 1 1 0 1 1 1 0 Transcription factor zinc-finger TF_Zn_Ribbon PF08271.7 gi|15669047|ref|NP_247851.1| - 1 8.7 4.8 2.3 7.5 2.8 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding Prim_Zn_Ribbon PF08273.7 gi|15669047|ref|NP_247851.1| - 5.7 7.0 7.1 57 3.9 4.9 2.2 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase DUF749 PF05370.6 gi|15669049|ref|NP_247853.1| - 4.4e-40 135.5 6.3 5.3e-40 135.2 4.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF749) DUF3213 PF11491.3 gi|15669049|ref|NP_247853.1| - 0.066 13.0 2.2 0.086 12.7 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3213) SpoU_sub_bind PF08032.7 gi|15669049|ref|NP_247853.1| - 0.14 12.2 1.9 0.51 10.5 0.2 2.1 1 1 1 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding DUF2118 PF09891.4 gi|15669050|ref|NP_247854.1| - 7.3e-57 191.2 3.9 8.3e-57 191.1 2.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) polyprenyl_synt PF00348.12 gi|15669051|ref|NP_247855.1| - 1.3e-77 260.2 1.2 1.6e-77 259.8 0.8 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase SQS_PSY PF00494.14 gi|15669051|ref|NP_247855.1| - 0.0002 20.7 0.1 0.00035 19.9 0.0 1.5 2 0 0 2 2 2 1 Squalene/phytoene synthase Terpene_synth_C PF03936.11 gi|15669051|ref|NP_247855.1| - 0.016 14.4 0.0 0.045 12.9 0.0 1.8 1 1 1 2 2 2 0 Terpene synthase family, metal binding domain DUF2122 PF09895.4 gi|15669051|ref|NP_247855.1| - 0.16 12.1 2.2 0.42 10.8 0.4 2.5 1 1 1 3 3 3 0 RecB-family nuclease (DUF2122) DUF2229 PF09989.4 gi|15669051|ref|NP_247855.1| - 0.19 11.1 2.5 0.22 10.9 0.5 1.9 2 0 0 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF2262 PF10020.4 gi|15669051|ref|NP_247855.1| - 2.6 8.2 10.9 11 6.1 0.0 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2262) Lactamase_B PF00753.22 gi|15669052|ref|NP_247856.1| - 5.3e-21 75.1 1.7 1.4e-20 73.7 1.2 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|15669052|ref|NP_247856.1| - 6.7e-10 38.6 0.4 2e-09 37.1 0.3 1.8 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|15669052|ref|NP_247856.1| - 3.2e-07 30.0 0.2 2.9e-05 23.6 0.1 2.2 2 0 0 2 2 2 2 Beta-lactamase superfamily domain PDEase_II PF02112.10 gi|15669052|ref|NP_247856.1| - 0.0038 16.2 0.1 0.0056 15.6 0.1 1.2 1 0 0 1 1 1 1 cAMP phosphodiesterases class-II FMN_dh PF01070.13 gi|15669053|ref|NP_247857.1| - 1.9e-28 99.3 0.0 3.1e-19 69.0 0.0 2.1 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|15669053|ref|NP_247857.1| - 0.00017 20.6 3.6 0.11 11.4 0.5 2.9 4 0 0 4 4 4 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.12 gi|15669053|ref|NP_247857.1| - 0.00019 20.4 0.3 0.0069 15.3 0.0 2.4 2 1 0 2 2 2 1 Conserved region in glutamate synthase CCG PF02754.11 gi|15669054|ref|NP_247858.1| - 2.1e-41 139.8 3.3 3.9e-20 71.6 0.1 2.4 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|15669055|ref|NP_247859.1| - 2.6e-12 46.5 6.3 4.2e-12 45.8 4.4 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15669055|ref|NP_247859.1| - 1.2e-10 41.5 6.2 2.1e-10 40.7 4.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15669055|ref|NP_247859.1| - 7.5e-06 25.6 9.3 1.9e-05 24.3 6.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669055|ref|NP_247859.1| - 7.7e-06 26.0 9.7 3.9e-05 23.8 7.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669055|ref|NP_247859.1| - 3.1e-05 24.6 3.3 0.088 13.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|15669055|ref|NP_247859.1| - 7.8e-05 22.9 8.7 0.00027 21.2 6.3 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15669055|ref|NP_247859.1| - 0.00064 20.0 10.1 0.013 15.9 0.3 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669055|ref|NP_247859.1| - 0.00068 19.4 5.3 0.0014 18.4 3.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15669055|ref|NP_247859.1| - 0.002 17.6 12.1 0.075 12.6 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15669055|ref|NP_247859.1| - 0.011 15.5 11.0 0.45 10.5 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669055|ref|NP_247859.1| - 0.02 14.7 10.4 0.05 13.4 0.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|15669055|ref|NP_247859.1| - 0.023 14.2 5.7 0.071 12.7 0.2 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.2 gi|15669055|ref|NP_247859.1| - 0.67 10.4 12.0 2.7 8.5 2.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|15669055|ref|NP_247859.1| - 1.4 9.6 15.4 1.8 9.2 2.2 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Radical_SAM PF04055.16 gi|15669056|ref|NP_247860.1| - 4.9e-29 101.6 1.5 1.9e-28 99.7 0.1 2.4 2 1 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|15669056|ref|NP_247860.1| - 1.9e-11 43.8 0.1 1.6e-09 37.6 0.0 2.7 2 1 1 3 3 3 1 B12 binding domain UPF0004 PF00919.15 gi|15669056|ref|NP_247860.1| - 0.053 13.3 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein family UPF0004 HIT PF01230.18 gi|15669057|ref|NP_247861.1| - 3.6e-33 113.9 0.1 4.4e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|15669057|ref|NP_247861.1| - 5.7e-18 65.2 0.1 6.7e-18 65.0 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding Radical_SAM PF04055.16 gi|15669058|ref|NP_247862.1| - 6.5e-25 88.2 1.6 8.6e-25 87.8 0.4 1.8 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.15 gi|15669058|ref|NP_247862.1| - 3.6e-22 78.0 0.3 1e-21 76.5 0.2 1.8 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 gi|15669058|ref|NP_247862.1| - 2.2e-12 46.5 1.6 4.5e-12 45.5 1.1 1.6 1 0 0 1 1 1 1 TRAM domain Phg_2220_C PF09524.5 gi|15669058|ref|NP_247862.1| - 0.027 14.4 0.1 0.09 12.7 0.1 1.9 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) UPF0180 PF03698.8 gi|15669058|ref|NP_247862.1| - 0.064 13.1 0.3 0.3 10.9 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) CBS PF00571.23 gi|15669059|ref|NP_247863.1| - 3.1e-30 103.6 1.1 3.2e-15 55.6 0.0 2.0 2 0 0 2 2 2 2 CBS domain CobU PF02283.11 gi|15669059|ref|NP_247863.1| - 0.017 14.4 0.0 0.023 14.1 0.0 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Put_Phosphatase PF06888.7 gi|15669059|ref|NP_247863.1| - 0.073 12.2 0.0 0.077 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative Phosphatase FAD_binding_4 PF01565.18 gi|15669059|ref|NP_247863.1| - 0.1 12.1 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain SMC_hinge PF06470.8 gi|15669059|ref|NP_247863.1| - 0.11 12.4 0.1 5.7 6.9 0.0 2.2 2 0 0 2 2 2 0 SMC proteins Flexible Hinge Domain Rad51 PF08423.6 gi|15669060|ref|NP_247864.1| - 3.7e-89 298.0 0.1 4.8e-89 297.6 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.1 gi|15669060|ref|NP_247864.1| - 1.1e-17 63.9 0.9 3.6e-17 62.2 0.6 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix domain AAA_25 PF13481.1 gi|15669060|ref|NP_247864.1| - 4.7e-14 52.2 0.0 9e-14 51.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|15669060|ref|NP_247864.1| - 2.1e-10 40.1 0.4 1.5e-09 37.3 0.3 1.9 1 1 0 1 1 1 1 recA bacterial DNA recombination protein KaiC PF06745.8 gi|15669060|ref|NP_247864.1| - 3e-10 39.6 0.4 6.9e-09 35.1 0.3 2.3 1 1 0 1 1 1 1 KaiC HHH PF00633.18 gi|15669060|ref|NP_247864.1| - 1.2e-09 37.3 0.9 0.00011 21.6 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|15669060|ref|NP_247864.1| - 5.1e-06 26.2 0.0 1.7e-05 24.6 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_8 PF14716.1 gi|15669060|ref|NP_247864.1| - 5e-05 23.4 0.1 0.082 13.0 0.0 3.2 3 0 0 3 3 3 1 Helix-hairpin-helix domain HHH_3 PF12836.2 gi|15669060|ref|NP_247864.1| - 0.00013 21.8 0.0 0.081 12.8 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.4 gi|15669060|ref|NP_247864.1| - 0.0016 17.9 0.0 0.023 14.2 0.0 2.7 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda DnaB_C PF03796.10 gi|15669060|ref|NP_247864.1| - 0.0029 16.5 0.0 0.099 11.5 0.0 2.1 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_33 PF13671.1 gi|15669060|ref|NP_247864.1| - 0.0093 15.8 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Sec63 PF02889.11 gi|15669060|ref|NP_247864.1| - 0.016 14.4 0.0 0.024 13.8 0.0 1.2 1 0 0 1 1 1 0 Sec63 Brl domain Cdd1 PF11731.3 gi|15669060|ref|NP_247864.1| - 0.016 15.0 0.0 0.07 13.0 0.0 2.1 2 0 0 2 2 2 0 Pathogenicity locus IMS_HHH PF11798.3 gi|15669060|ref|NP_247864.1| - 0.017 15.1 0.1 0.13 12.3 0.0 2.6 3 0 0 3 3 3 0 IMS family HHH motif PAXNEB PF05625.6 gi|15669060|ref|NP_247864.1| - 0.099 11.4 0.1 0.17 10.6 0.1 1.3 1 0 0 1 1 1 0 PAXNEB protein FrhB_FdhB_C PF04432.8 gi|15669061|ref|NP_247865.1| - 7e-44 149.0 0.2 7e-44 149.0 0.2 2.3 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus NIR_SIR PF01077.17 gi|15669061|ref|NP_247865.1| - 8.5e-37 125.9 1.7 1.4e-36 125.1 0.6 1.8 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain FrhB_FdhB_N PF04422.8 gi|15669061|ref|NP_247865.1| - 4.1e-21 74.6 0.1 9e-21 73.5 0.0 1.6 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_7 PF12838.2 gi|15669061|ref|NP_247865.1| - 1.4e-14 54.2 29.6 0.00015 22.0 3.8 4.6 4 0 0 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669061|ref|NP_247865.1| - 1.6e-13 50.7 29.4 0.00019 21.5 0.4 4.7 4 0 0 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15669061|ref|NP_247865.1| - 2.8e-12 45.6 57.0 1.3e-07 30.9 3.6 6.2 7 0 0 7 7 6 3 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15669061|ref|NP_247865.1| - 6.4e-12 45.0 35.6 3.6e-05 23.4 10.5 4.6 3 1 2 5 5 5 4 4Fe-4S dicluster domain NIR_SIR_ferr PF03460.12 gi|15669061|ref|NP_247865.1| - 5e-11 42.0 0.0 2.3e-10 39.9 0.0 2.2 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4_6 PF12837.2 gi|15669061|ref|NP_247865.1| - 2.3e-10 39.8 37.6 4.5e-06 26.2 2.1 5.4 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_2 PF12797.2 gi|15669061|ref|NP_247865.1| - 3.1e-09 36.2 38.0 0.00053 19.7 2.0 5.7 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15669061|ref|NP_247865.1| - 6.8e-09 36.3 25.9 0.0046 17.6 1.1 5.5 4 1 2 6 6 6 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15669061|ref|NP_247865.1| - 2.6e-08 33.6 33.2 6.8e-06 25.8 8.8 4.1 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15669061|ref|NP_247865.1| - 1.6e-07 31.6 31.4 0.0076 16.6 0.8 5.4 5 0 0 5 5 5 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15669061|ref|NP_247865.1| - 1.8e-07 31.0 28.5 0.024 14.6 9.9 5.3 3 2 3 6 6 6 5 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15669061|ref|NP_247865.1| - 0.00075 19.8 34.6 0.15 12.4 0.8 5.6 3 2 3 6 6 6 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15669061|ref|NP_247865.1| - 0.0015 18.6 44.2 0.048 14.0 1.9 5.7 6 0 0 6 6 5 3 4Fe-4S binding domain DUF4375 PF14300.1 gi|15669061|ref|NP_247865.1| - 0.055 13.4 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Coiled-coil_56 PF09813.4 gi|15669061|ref|NP_247865.1| - 0.29 11.1 1.5 0.74 9.8 0.4 2.1 2 0 0 2 2 1 0 Coiled-coil domain-containing protein 56 Fer4_3 PF12798.2 gi|15669061|ref|NP_247865.1| - 0.89 10.2 59.2 0.21 12.2 4.1 6.3 7 0 0 7 7 5 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15669061|ref|NP_247865.1| - 1.6 9.3 36.5 0.13 12.8 2.1 6.4 4 2 2 6 6 6 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|15669061|ref|NP_247865.1| - 5.1 7.5 29.7 2.1 8.7 0.0 5.7 5 1 1 6 6 6 0 4Fe-4S single cluster domain Gate PF07670.9 gi|15669062|ref|NP_247866.1| - 1e-16 60.8 16.1 2e-08 34.0 2.8 2.9 3 2 0 3 3 3 2 Nucleoside recognition Peripla_BP_2 PF01497.13 gi|15669063|ref|NP_247867.1| - 8.8e-20 70.8 0.1 1.4e-19 70.1 0.1 1.3 1 0 0 1 1 1 1 Periplasmic binding protein ABC_tran PF00005.22 gi|15669064|ref|NP_247868.1| - 2.9e-29 102.0 0.0 4.4e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669064|ref|NP_247868.1| - 6.1e-14 52.6 2.4 3.7e-06 27.1 0.0 2.6 3 0 0 3 3 3 2 AAA domain AAA_14 PF13173.1 gi|15669064|ref|NP_247868.1| - 2.7e-08 33.7 0.4 1.5e-05 24.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|15669064|ref|NP_247868.1| - 4.5e-08 33.2 0.1 1.5e-07 31.5 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|15669064|ref|NP_247868.1| - 7.4e-08 32.5 1.0 8.2e-07 29.2 0.7 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|15669064|ref|NP_247868.1| - 2.8e-06 26.7 0.6 5e-05 22.6 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|15669064|ref|NP_247868.1| - 3.3e-06 26.5 0.0 7.1e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Arch_ATPase PF01637.13 gi|15669064|ref|NP_247868.1| - 2.3e-05 24.2 1.6 6.2e-05 22.8 1.0 1.9 1 1 0 1 1 1 1 Archaeal ATPase AAA_17 PF13207.1 gi|15669064|ref|NP_247868.1| - 0.00013 22.7 3.3 0.0012 19.6 2.3 2.5 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|15669064|ref|NP_247868.1| - 0.00017 20.8 10.0 0.023 13.7 0.1 2.6 2 1 0 3 3 3 2 AAA ATPase domain AAA_25 PF13481.1 gi|15669064|ref|NP_247868.1| - 0.00021 20.7 0.7 0.025 13.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|15669064|ref|NP_247868.1| - 0.00022 21.5 3.0 0.00035 20.9 1.9 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|15669064|ref|NP_247868.1| - 0.00026 21.1 3.5 0.004 17.3 2.4 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|15669064|ref|NP_247868.1| - 0.0011 18.4 0.4 0.028 13.8 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain NACHT PF05729.7 gi|15669064|ref|NP_247868.1| - 0.0018 17.9 0.4 0.0066 16.1 0.0 1.9 2 0 0 2 2 2 1 NACHT domain ATP-synt_ab PF00006.20 gi|15669064|ref|NP_247868.1| - 0.0019 17.7 0.0 0.0024 17.4 0.0 1.4 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_19 PF13245.1 gi|15669064|ref|NP_247868.1| - 0.0026 17.4 0.1 0.0078 15.9 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain AAA_5 PF07728.9 gi|15669064|ref|NP_247868.1| - 0.0027 17.4 0.2 0.014 15.0 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) MutS_V PF00488.16 gi|15669064|ref|NP_247868.1| - 0.0031 16.9 0.2 0.015 14.7 0.0 1.9 2 0 0 2 2 2 1 MutS domain V MobB PF03205.9 gi|15669064|ref|NP_247868.1| - 0.004 16.8 0.6 0.0095 15.6 0.1 2.0 2 0 0 2 2 1 1 Molybdopterin guanine dinucleotide synthesis protein B DUF258 PF03193.11 gi|15669064|ref|NP_247868.1| - 0.004 16.3 0.0 0.0093 15.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_30 PF13604.1 gi|15669064|ref|NP_247868.1| - 0.0085 15.6 0.0 0.02 14.4 0.0 1.6 2 0 0 2 2 1 1 AAA domain Rad17 PF03215.10 gi|15669064|ref|NP_247868.1| - 0.012 14.3 1.0 0.053 12.1 0.1 2.0 1 1 1 2 2 2 0 Rad17 cell cycle checkpoint protein RNA_helicase PF00910.17 gi|15669064|ref|NP_247868.1| - 0.016 15.3 0.1 0.044 13.9 0.0 1.7 1 0 0 1 1 1 0 RNA helicase UPF0079 PF02367.12 gi|15669064|ref|NP_247868.1| - 0.017 14.7 0.0 0.044 13.4 0.0 1.7 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 Zeta_toxin PF06414.7 gi|15669064|ref|NP_247868.1| - 0.017 14.2 0.4 0.11 11.5 0.0 2.4 2 2 0 2 2 2 0 Zeta toxin ABC_ATPase PF09818.4 gi|15669064|ref|NP_247868.1| - 0.021 13.4 1.3 0.061 11.9 0.1 2.2 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NTPase_1 PF03266.10 gi|15669064|ref|NP_247868.1| - 0.04 13.6 2.0 0.35 10.5 0.1 2.6 1 1 1 2 2 2 0 NTPase T2SE PF00437.15 gi|15669064|ref|NP_247868.1| - 0.04 12.8 0.1 0.15 10.9 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.1 gi|15669064|ref|NP_247868.1| - 0.046 13.5 0.1 0.069 13.0 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|15669064|ref|NP_247868.1| - 0.054 11.9 0.5 2.2 6.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.1 gi|15669064|ref|NP_247868.1| - 0.055 13.4 0.1 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|15669064|ref|NP_247868.1| - 0.079 12.1 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.1 gi|15669064|ref|NP_247868.1| - 0.096 12.2 0.1 0.17 11.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|15669064|ref|NP_247868.1| - 0.098 12.0 0.1 0.19 11.1 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DEAD PF00270.24 gi|15669064|ref|NP_247868.1| - 0.12 11.9 0.2 1.8 8.0 0.1 2.7 2 1 0 2 2 2 0 DEAD/DEAH box helicase AAA_18 PF13238.1 gi|15669064|ref|NP_247868.1| - 0.12 12.7 4.0 0.67 10.2 1.7 2.7 1 1 1 2 2 2 0 AAA domain Miro PF08477.8 gi|15669064|ref|NP_247868.1| - 0.12 12.8 0.0 0.37 11.2 0.0 1.8 1 0 0 1 1 1 0 Miro-like protein cobW PF02492.14 gi|15669064|ref|NP_247868.1| - 0.12 11.8 0.7 0.31 10.4 0.3 2.0 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain IstB_IS21 PF01695.12 gi|15669064|ref|NP_247868.1| - 0.13 11.7 0.5 0.75 9.1 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein MMR_HSR1 PF01926.18 gi|15669064|ref|NP_247868.1| - 0.4 10.6 3.0 1.2 9.0 2.1 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF2913 PF11140.3 gi|15669065|ref|NP_247869.1| - 0.017 14.3 0.1 0.019 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2913) DUF718 PF05336.8 gi|15669065|ref|NP_247869.1| - 0.053 13.3 0.1 0.063 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF718) TPR_12 PF13424.1 gi|15669066|ref|NP_247870.1| - 1.7e-11 43.8 20.3 5e-06 26.3 0.8 5.7 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15669066|ref|NP_247870.1| - 5.4e-07 28.9 7.6 1.6 8.7 0.0 6.7 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15669066|ref|NP_247870.1| - 0.0032 17.2 37.6 0.48 10.4 0.6 8.0 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|15669066|ref|NP_247870.1| - 0.042 13.4 37.0 0.13 11.8 4.3 6.3 4 2 2 6 6 6 0 TPR repeat TPR_1 PF00515.23 gi|15669066|ref|NP_247870.1| - 1.4 8.6 40.1 0.2 11.3 0.6 8.0 9 0 0 9 9 9 0 Tetratricopeptide repeat PPR PF01535.15 gi|15669066|ref|NP_247870.1| - 2 8.5 9.7 41 4.4 0.2 5.8 6 0 0 6 6 6 0 PPR repeat FecCD PF01032.13 gi|15669067|ref|NP_247871.1| - 1.9e-57 194.4 33.2 3.1e-57 193.7 23.0 1.3 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.12 gi|15669067|ref|NP_247871.1| - 4.5e-06 26.1 16.3 4.5e-06 26.1 11.3 2.9 2 1 1 3 3 3 1 ABC 3 transport family DUF3007 PF11460.3 gi|15669067|ref|NP_247871.1| - 0.7 9.9 6.3 0.2 11.7 1.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3007) Peripla_BP_2 PF01497.13 gi|15669068|ref|NP_247873.1| - 3.6e-26 91.7 0.0 7.1e-26 90.7 0.0 1.4 2 0 0 2 2 2 1 Periplasmic binding protein DUF3153 PF11353.3 gi|15669068|ref|NP_247873.1| - 0.029 13.8 0.0 0.044 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3153) Fer4_NifH PF00142.13 gi|15669069|ref|NP_247874.1| - 6.2e-118 392.9 3.8 7.1e-118 392.7 2.6 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|15669069|ref|NP_247874.1| - 5.5e-14 52.0 0.1 8.8e-14 51.3 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|15669069|ref|NP_247874.1| - 2.2e-08 33.4 0.2 4.1e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|15669069|ref|NP_247874.1| - 1.5e-07 31.5 0.0 3.1e-06 27.1 0.0 2.5 3 0 0 3 3 3 1 AAA domain ArgK PF03308.11 gi|15669069|ref|NP_247874.1| - 4.3e-05 22.4 0.2 7.5e-05 21.6 0.1 1.3 1 0 0 1 1 1 1 ArgK protein AAA_16 PF13191.1 gi|15669069|ref|NP_247874.1| - 8.5e-05 22.6 0.0 0.00022 21.2 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.1 gi|15669069|ref|NP_247874.1| - 0.0003 20.2 0.2 0.00076 18.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.17 gi|15669069|ref|NP_247874.1| - 0.00053 19.4 0.4 0.0014 18.1 0.2 1.7 2 0 0 2 2 1 1 SRP54-type protein, GTPase domain AAA_19 PF13245.1 gi|15669069|ref|NP_247874.1| - 0.00068 19.3 0.1 0.0018 18.0 0.1 1.7 1 0 0 1 1 1 1 Part of AAA domain RNA_helicase PF00910.17 gi|15669069|ref|NP_247874.1| - 0.00069 19.7 0.0 0.0023 18.0 0.0 1.9 2 0 0 2 2 2 1 RNA helicase AAA_10 PF12846.2 gi|15669069|ref|NP_247874.1| - 0.0007 19.1 0.1 0.0014 18.0 0.0 1.5 2 0 0 2 2 2 1 AAA-like domain MipZ PF09140.6 gi|15669069|ref|NP_247874.1| - 0.00086 18.4 0.0 0.0017 17.4 0.0 1.4 1 0 0 1 1 1 1 ATPase MipZ DUF87 PF01935.12 gi|15669069|ref|NP_247874.1| - 0.0028 17.5 0.0 0.005 16.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF87 ATP_bind_1 PF03029.12 gi|15669069|ref|NP_247874.1| - 0.0075 15.8 0.8 0.033 13.7 0.1 2.0 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_24 PF13479.1 gi|15669069|ref|NP_247874.1| - 0.017 14.6 0.1 0.03 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|15669069|ref|NP_247874.1| - 0.023 14.2 0.1 0.054 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.9 gi|15669069|ref|NP_247874.1| - 0.024 14.3 0.2 0.058 13.1 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.10 gi|15669069|ref|NP_247874.1| - 0.069 12.8 0.2 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 NTPase VirC1 PF07015.6 gi|15669069|ref|NP_247874.1| - 0.071 12.1 0.1 0.12 11.3 0.1 1.3 1 0 0 1 1 1 0 VirC1 protein AAA_26 PF13500.1 gi|15669069|ref|NP_247874.1| - 0.076 12.6 0.1 0.26 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|15669069|ref|NP_247874.1| - 0.082 13.0 0.0 0.2 11.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|15669069|ref|NP_247874.1| - 0.083 12.3 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_5 PF07728.9 gi|15669069|ref|NP_247874.1| - 0.087 12.5 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.7 gi|15669069|ref|NP_247874.1| - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Thymidylate_kin PF02223.12 gi|15669069|ref|NP_247874.1| - 0.14 11.5 0.2 1 8.7 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase TrwB_AAD_bind PF10412.4 gi|15669069|ref|NP_247874.1| - 0.18 10.4 0.1 0.29 9.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain YhjQ PF06564.7 gi|15669069|ref|NP_247874.1| - 0.18 11.1 0.0 0.57 9.4 0.0 1.7 2 0 0 2 2 2 0 YhjQ protein Gate PF07670.9 gi|15669070|ref|NP_247875.1| - 1.1e-22 80.0 15.2 3.5e-13 49.4 3.5 2.8 2 2 0 2 2 2 2 Nucleoside recognition OTCace PF00185.19 gi|15669071|ref|NP_247876.1| - 9.3e-55 184.8 0.0 2.2e-54 183.6 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|15669071|ref|NP_247876.1| - 4.7e-50 168.9 0.0 6.4e-50 168.5 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MTS PF05175.9 gi|15669072|ref|NP_247877.1| - 1.6e-53 180.5 0.1 1.8e-53 180.3 0.1 1.0 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|15669072|ref|NP_247877.1| - 2e-14 53.4 0.3 2.6e-14 53.0 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15669072|ref|NP_247877.1| - 6e-13 48.8 0.0 7.9e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|15669072|ref|NP_247877.1| - 1.5e-12 47.2 1.3 1.8e-12 46.9 0.9 1.2 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) tRNA_U5-meth_tr PF05958.6 gi|15669072|ref|NP_247877.1| - 1.9e-09 36.7 0.0 2.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.11 gi|15669072|ref|NP_247877.1| - 1.2e-08 34.7 0.6 1.8e-08 34.1 0.3 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|15669072|ref|NP_247877.1| - 3.3e-08 34.0 0.0 4.8e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15669072|ref|NP_247877.1| - 1.4e-07 31.7 0.0 2e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|15669072|ref|NP_247877.1| - 6.3e-07 29.0 0.3 1e-06 28.3 0.2 1.3 1 1 0 1 1 1 1 Putative methyltransferase Cons_hypoth95 PF03602.10 gi|15669072|ref|NP_247877.1| - 1.1e-06 28.1 0.0 1.3e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 RrnaAD PF00398.15 gi|15669072|ref|NP_247877.1| - 1e-05 24.7 0.0 1.3e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.7 gi|15669072|ref|NP_247877.1| - 3.1e-05 24.3 0.1 5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|15669072|ref|NP_247877.1| - 3.1e-05 23.5 0.0 5.6e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.7 gi|15669072|ref|NP_247877.1| - 3.2e-05 24.3 0.0 8.3e-05 23.0 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain CMAS PF02353.15 gi|15669072|ref|NP_247877.1| - 5.7e-05 22.3 0.3 7e-05 22.0 0.2 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|15669072|ref|NP_247877.1| - 0.00013 21.2 1.7 0.00017 20.8 1.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family GidB PF02527.10 gi|15669072|ref|NP_247877.1| - 0.00016 20.8 0.3 0.00021 20.5 0.2 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G UPF0020 PF01170.13 gi|15669072|ref|NP_247877.1| - 0.00051 19.6 0.0 0.00073 19.1 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.1 gi|15669072|ref|NP_247877.1| - 0.00085 19.0 0.1 0.0013 18.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain DUF43 PF01861.11 gi|15669072|ref|NP_247877.1| - 0.00096 18.1 0.3 0.0014 17.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF43 TehB PF03848.9 gi|15669072|ref|NP_247877.1| - 0.0012 18.0 2.3 0.0015 17.6 0.8 1.8 2 1 0 2 2 2 1 Tellurite resistance protein TehB NodS PF05401.6 gi|15669072|ref|NP_247877.1| - 0.0012 18.2 0.0 0.0021 17.4 0.0 1.4 1 1 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.14 gi|15669072|ref|NP_247877.1| - 0.0013 18.3 0.2 0.0017 17.9 0.1 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_Mtase PF02384.11 gi|15669072|ref|NP_247877.1| - 0.0022 17.1 0.0 0.0032 16.5 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase SPOUT_MTase_2 PF14419.1 gi|15669072|ref|NP_247877.1| - 0.0025 17.0 0.2 0.0031 16.7 0.1 1.2 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP TRM PF02005.11 gi|15669072|ref|NP_247877.1| - 0.0031 16.4 0.1 0.0036 16.3 0.1 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltrans_SAM PF10672.4 gi|15669072|ref|NP_247877.1| - 0.004 16.0 0.1 0.0045 15.8 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_4 PF02390.12 gi|15669072|ref|NP_247877.1| - 0.0053 15.8 0.2 0.0099 14.9 0.1 1.6 1 1 0 1 1 1 1 Putative methyltransferase N6_N4_Mtase PF01555.13 gi|15669072|ref|NP_247877.1| - 0.0063 16.0 1.1 0.072 12.5 0.1 2.1 1 1 0 2 2 2 1 DNA methylase FmrO PF07091.6 gi|15669072|ref|NP_247877.1| - 0.027 13.4 0.1 0.042 12.8 0.1 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Met_10 PF02475.11 gi|15669073|ref|NP_247878.1| - 2.8e-74 249.0 1.3 4e-74 248.5 0.9 1.2 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.8 gi|15669073|ref|NP_247878.1| - 7.5e-08 31.8 0.2 1.9e-07 30.5 0.1 1.5 1 1 1 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|15669073|ref|NP_247878.1| - 1.8e-07 30.8 0.1 3.7e-07 29.8 0.1 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.9 gi|15669073|ref|NP_247878.1| - 2.2e-07 30.4 0.0 4.2e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|15669073|ref|NP_247878.1| - 2.2e-06 27.7 0.0 5e-06 26.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669073|ref|NP_247878.1| - 2.1e-05 24.1 0.1 8.1e-05 22.2 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669073|ref|NP_247878.1| - 2.3e-05 24.9 0.0 4.4e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669073|ref|NP_247878.1| - 3.9e-05 23.1 0.0 7.6e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 DNA_methylase PF00145.12 gi|15669073|ref|NP_247878.1| - 0.00012 21.3 0.4 0.0004 19.6 0.0 1.8 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase TRM PF02005.11 gi|15669073|ref|NP_247878.1| - 0.00012 21.1 1.5 0.00017 20.6 1.0 1.4 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase MethyltransfD12 PF02086.10 gi|15669073|ref|NP_247878.1| - 0.00044 19.7 0.1 0.00067 19.1 0.1 1.4 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase N6_N4_Mtase PF01555.13 gi|15669073|ref|NP_247878.1| - 0.0077 15.7 0.0 0.02 14.4 0.0 1.7 1 0 0 1 1 1 1 DNA methylase Methyltransf_11 PF08241.7 gi|15669073|ref|NP_247878.1| - 0.015 15.7 0.0 0.035 14.6 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PRMT5 PF05185.11 gi|15669073|ref|NP_247878.1| - 0.02 13.8 0.1 0.031 13.2 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase DUF1390 PF07150.6 gi|15669073|ref|NP_247878.1| - 0.038 13.3 3.0 0.053 12.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1390) Methyltransf_12 PF08242.7 gi|15669073|ref|NP_247878.1| - 0.085 13.3 0.0 0.27 11.7 0.0 1.9 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.4 gi|15669073|ref|NP_247878.1| - 0.096 12.1 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Rad17 PF03215.10 gi|15669074|ref|NP_247879.1| - 6.6e-19 67.9 7.2 6.7e-12 44.8 0.0 3.2 2 2 2 4 4 4 2 Rad17 cell cycle checkpoint protein AAA PF00004.24 gi|15669074|ref|NP_247879.1| - 6.6e-16 58.7 1.3 1.3e-15 57.7 0.0 2.1 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|15669074|ref|NP_247879.1| - 2.2e-11 43.2 0.6 1.7e-10 40.3 0.0 2.4 3 0 0 3 3 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 gi|15669074|ref|NP_247879.1| - 1.6e-08 34.5 0.1 7.1e-08 32.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.8 gi|15669074|ref|NP_247879.1| - 1.4e-07 30.7 1.8 1.5e-07 30.6 0.0 2.1 3 0 0 3 3 2 1 Protein of unknown function (DUF815) AAA_16 PF13191.1 gi|15669074|ref|NP_247879.1| - 2.6e-07 30.7 0.6 7.8e-05 22.7 0.0 3.2 2 1 1 3 3 3 1 AAA ATPase domain AAA_17 PF13207.1 gi|15669074|ref|NP_247879.1| - 3.5e-07 31.0 0.1 3.5e-07 31.0 0.1 3.5 2 1 0 3 3 3 1 AAA domain AAA_22 PF13401.1 gi|15669074|ref|NP_247879.1| - 7.7e-07 29.3 2.7 0.00015 21.8 0.0 4.0 2 2 1 3 3 3 1 AAA domain IstB_IS21 PF01695.12 gi|15669074|ref|NP_247879.1| - 1.4e-06 27.8 0.0 6.7e-06 25.6 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein Zeta_toxin PF06414.7 gi|15669074|ref|NP_247879.1| - 9.4e-06 24.8 0.0 2.8e-05 23.3 0.0 1.8 1 0 0 1 1 1 1 Zeta toxin Arch_ATPase PF01637.13 gi|15669074|ref|NP_247879.1| - 1.4e-05 24.9 0.1 1.4e-05 24.9 0.1 3.7 2 1 1 3 3 1 1 Archaeal ATPase NACHT PF05729.7 gi|15669074|ref|NP_247879.1| - 4.2e-05 23.2 0.0 0.034 13.7 0.0 2.5 2 0 0 2 2 2 2 NACHT domain AAA_5 PF07728.9 gi|15669074|ref|NP_247879.1| - 6.5e-05 22.6 0.0 0.00026 20.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.1 gi|15669074|ref|NP_247879.1| - 9.3e-05 22.3 0.0 0.00022 21.0 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|15669074|ref|NP_247879.1| - 0.00015 21.7 0.2 0.00058 19.8 0.0 2.1 2 0 0 2 2 1 1 AAA domain RNA_helicase PF00910.17 gi|15669074|ref|NP_247879.1| - 0.00094 19.3 0.2 0.0038 17.3 0.0 2.2 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.1 gi|15669074|ref|NP_247879.1| - 0.0018 18.5 0.0 0.0018 18.5 0.0 3.7 3 1 0 3 3 2 1 AAA domain Mg_chelatase PF01078.16 gi|15669074|ref|NP_247879.1| - 0.003 16.7 0.0 0.0061 15.7 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.1 gi|15669074|ref|NP_247879.1| - 0.0043 16.7 0.0 0.01 15.5 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain tRNA_lig_kinase PF08303.6 gi|15669074|ref|NP_247879.1| - 0.0085 15.9 3.1 0.6 9.9 0.0 3.4 2 1 1 3 3 3 1 tRNA ligase kinase domain T2SE PF00437.15 gi|15669074|ref|NP_247879.1| - 0.009 14.9 0.0 0.044 12.6 0.0 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_25 PF13481.1 gi|15669074|ref|NP_247879.1| - 0.011 15.1 0.0 0.028 13.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.1 gi|15669074|ref|NP_247879.1| - 0.018 15.0 0.0 0.043 13.8 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.22 gi|15669074|ref|NP_247879.1| - 0.024 14.9 0.0 0.024 14.9 0.0 2.9 2 1 0 2 2 2 0 ABC transporter SKI PF01202.17 gi|15669074|ref|NP_247879.1| - 0.038 13.8 7.2 0.11 12.3 0.0 2.8 3 0 0 3 3 2 0 Shikimate kinase ResIII PF04851.10 gi|15669074|ref|NP_247879.1| - 0.21 11.4 0.0 0.21 11.4 0.0 3.6 2 2 1 3 3 2 0 Type III restriction enzyme, res subunit DNA_pol_B PF00136.16 gi|15669075|ref|NP_247880.1| - 4.4e-86 289.4 17.0 3.6e-61 207.3 3.1 4.0 4 0 0 4 4 4 3 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|15669075|ref|NP_247880.1| - 1.6e-40 139.0 11.7 1.6e-40 139.0 8.1 3.4 3 1 0 3 3 3 1 DNA polymerase family B, exonuclease domain LAGLIDADG_3 PF14528.1 gi|15669075|ref|NP_247880.1| - 2.3e-11 43.7 20.6 8.6e-08 32.3 0.8 6.2 4 2 1 5 5 5 3 LAGLIDADG-like domain RNase_H_2 PF13482.1 gi|15669075|ref|NP_247880.1| - 2.1e-09 37.4 1.0 2.1e-09 37.4 0.7 2.7 2 0 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.4 gi|15669075|ref|NP_247880.1| - 1.8e-06 27.6 0.3 5.4e-06 26.0 0.2 1.8 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB Hom_end_hint PF05203.11 gi|15669075|ref|NP_247880.1| - 3.3e-05 23.7 2.3 7.8e-05 22.5 0.5 2.5 2 1 0 2 2 2 1 Hom_end-associated Hint Vint PF14623.1 gi|15669075|ref|NP_247880.1| - 0.0013 18.2 0.6 0.0044 16.5 0.0 2.2 2 0 0 2 2 2 1 Hint-domain Intein_splicing PF14890.1 gi|15669075|ref|NP_247880.1| - 0.0013 17.6 33.6 0.018 13.9 4.8 4.9 4 1 0 4 4 4 3 Intein splicing domain Hint PF01079.15 gi|15669075|ref|NP_247880.1| - 0.03 13.5 0.0 2.4 7.2 0.0 2.4 2 0 0 2 2 2 0 Hint module T2SJ PF11612.3 gi|15669075|ref|NP_247880.1| - 0.23 11.2 0.0 15 5.2 0.0 2.3 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein J PBP_like PF12727.2 gi|15669076|ref|NP_247881.1| - 9e-60 200.9 0.0 2.2e-59 199.6 0.0 1.6 2 0 0 2 2 2 1 PBP superfamily domain MoeA_N PF03453.12 gi|15669076|ref|NP_247881.1| - 4.2e-58 195.2 0.2 6.9e-58 194.5 0.2 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|15669076|ref|NP_247881.1| - 1.4e-30 105.5 0.1 2.7e-30 104.6 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|15669076|ref|NP_247881.1| - 1.1e-17 63.7 0.0 3.2e-17 62.2 0.0 1.9 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) OpuAC PF04069.7 gi|15669076|ref|NP_247881.1| - 0.04 13.2 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system Phosphonate-bd PF12974.2 gi|15669076|ref|NP_247881.1| - 0.075 12.4 0.1 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein GATase PF00117.23 gi|15669076|ref|NP_247881.1| - 0.12 11.7 0.0 0.28 10.6 0.0 1.6 1 0 0 1 1 1 0 Glutamine amidotransferase class-I T2SE PF00437.15 gi|15669076|ref|NP_247881.1| - 0.15 10.9 0.1 0.41 9.4 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein CofC PF01983.11 gi|15669077|ref|NP_247882.1| - 3.1e-110 366.2 4.4 3.5e-110 366.0 3.1 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|15669077|ref|NP_247882.1| - 3.6e-08 33.6 0.0 5.9e-08 32.9 0.0 1.3 2 0 0 2 2 2 1 MobA-like NTP transferase domain DUF2064 PF09837.4 gi|15669077|ref|NP_247882.1| - 6.8e-07 28.9 0.0 1.1e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) YflT PF11181.3 gi|15669077|ref|NP_247882.1| - 0.0044 17.1 0.3 0.01 15.9 0.2 1.7 1 0 0 1 1 1 1 Heat induced stress protein YflT Lactamase_B PF00753.22 gi|15669078|ref|NP_247883.1| - 6e-24 84.7 0.0 7.4e-24 84.4 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|15669078|ref|NP_247883.1| - 5.5e-07 29.3 0.0 6.1e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|15669078|ref|NP_247883.1| - 5.4e-05 22.9 0.0 7.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain NAD_binding_6 PF08030.7 gi|15669079|ref|NP_247884.1| - 0.1 12.5 2.8 0.28 11.0 2.0 1.7 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Auto_anti-p27 PF06677.7 gi|15669080|ref|NP_247885.1| - 3.1e-20 71.6 3.7 5.5e-20 70.8 2.6 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.2 gi|15669080|ref|NP_247885.1| - 0.033 14.0 2.7 0.062 13.1 1.9 1.4 1 0 0 1 1 1 0 Double zinc ribbon GFA PF04828.9 gi|15669080|ref|NP_247885.1| - 0.091 12.7 0.5 0.22 11.5 0.4 1.6 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme gp32 PF08804.5 gi|15669080|ref|NP_247885.1| - 0.092 12.8 0.6 0.15 12.1 0.4 1.5 1 1 0 1 1 1 0 gp32 DNA binding protein like Prok-RING_1 PF14446.1 gi|15669080|ref|NP_247885.1| - 0.53 10.0 4.5 0.33 10.7 1.8 1.6 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Arch_flagellin PF01917.11 gi|15669081|ref|NP_247886.1| - 1.2e-74 250.0 5.2 1.4e-74 249.8 3.6 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.11 gi|15669082|ref|NP_247887.1| - 2.9e-70 235.7 7.9 3.4e-70 235.5 5.5 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.11 gi|15669083|ref|NP_247888.1| - 2.3e-56 190.4 6.3 2.7e-56 190.2 4.3 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin FlaC_arch PF05377.6 gi|15669084|ref|NP_247889.1| - 3.1e-22 78.1 10.6 9.4e-21 73.4 4.3 2.4 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) TelA PF05816.6 gi|15669084|ref|NP_247889.1| - 9.8e-05 21.2 4.5 0.00011 21.0 3.1 1.1 1 0 0 1 1 1 1 Toxic anion resistance protein (TelA) CENP-F_leu_zip PF10473.4 gi|15669084|ref|NP_247889.1| - 0.00084 19.2 9.3 0.0029 17.4 1.1 2.2 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin_1 PF12718.2 gi|15669084|ref|NP_247889.1| - 0.00095 19.0 7.8 0.00095 19.0 5.4 2.0 1 1 1 2 2 2 1 Tropomyosin like DivIC PF04977.10 gi|15669084|ref|NP_247889.1| - 0.0017 17.7 2.3 0.46 9.9 0.5 2.5 2 0 0 2 2 2 1 Septum formation initiator MAD PF05557.8 gi|15669084|ref|NP_247889.1| - 0.0024 16.0 4.3 0.0026 15.9 3.0 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein Occludin_ELL PF07303.8 gi|15669084|ref|NP_247889.1| - 0.003 18.2 1.9 0.23 12.1 0.3 2.4 1 1 1 2 2 2 1 Occludin homology domain Prefoldin PF02996.12 gi|15669084|ref|NP_247889.1| - 0.0034 17.0 4.0 0.16 11.6 0.3 2.4 2 0 0 2 2 2 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|15669084|ref|NP_247889.1| - 0.0043 16.8 6.9 0.31 10.8 0.7 2.5 2 0 0 2 2 2 2 Prefoldin subunit bZIP_1 PF00170.16 gi|15669084|ref|NP_247889.1| - 0.0043 16.9 8.6 0.17 11.8 1.6 2.4 2 0 0 2 2 2 1 bZIP transcription factor DUF342 PF03961.8 gi|15669084|ref|NP_247889.1| - 0.0046 15.4 5.9 0.0056 15.1 4.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF342) HALZ PF02183.13 gi|15669084|ref|NP_247889.1| - 0.0049 16.5 7.3 0.37 10.5 1.2 2.4 2 0 0 2 2 2 2 Homeobox associated leucine zipper DUF1978 PF09321.5 gi|15669084|ref|NP_247889.1| - 0.0055 16.1 1.2 0.013 14.9 0.7 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF1978) Spc7 PF08317.6 gi|15669084|ref|NP_247889.1| - 0.0067 15.1 7.3 0.008 14.8 5.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein DASH_Spc19 PF08287.6 gi|15669084|ref|NP_247889.1| - 0.0094 15.5 3.2 0.015 14.9 2.2 1.2 1 0 0 1 1 1 1 Spc19 Reo_sigmaC PF04582.7 gi|15669084|ref|NP_247889.1| - 0.011 14.9 0.9 0.016 14.4 0.6 1.3 1 1 0 1 1 1 0 Reovirus sigma C capsid protein LXG PF04740.7 gi|15669084|ref|NP_247889.1| - 0.011 15.4 2.7 0.014 15.1 1.3 1.5 1 1 0 1 1 1 0 LXG domain of WXG superfamily GvpK PF05121.7 gi|15669084|ref|NP_247889.1| - 0.015 15.1 8.6 0.73 9.6 0.3 3.2 2 1 1 3 3 3 0 Gas vesicle protein K Rab5-bind PF09311.6 gi|15669084|ref|NP_247889.1| - 0.02 14.7 2.1 0.57 10.0 0.1 2.2 2 0 0 2 2 2 0 Rabaptin-like protein ADIP PF11559.3 gi|15669084|ref|NP_247889.1| - 0.027 14.3 3.4 0.81 9.5 0.3 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding ATP_bind_4 PF01902.12 gi|15669084|ref|NP_247889.1| - 0.03 13.6 0.6 0.053 12.8 0.2 1.5 1 1 0 1 1 1 0 ATP-binding region Spectrin PF00435.16 gi|15669084|ref|NP_247889.1| - 0.031 14.5 2.6 0.18 12.0 1.8 2.1 1 1 0 1 1 1 0 Spectrin repeat Fib_alpha PF08702.5 gi|15669084|ref|NP_247889.1| - 0.032 14.3 3.3 0.047 13.8 2.3 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Cep57_CLD PF14073.1 gi|15669084|ref|NP_247889.1| - 0.033 14.0 2.9 0.077 12.8 2.0 1.6 1 1 0 1 1 1 0 Centrosome localisation domain of Cep57 CENP-Q PF13094.1 gi|15669084|ref|NP_247889.1| - 0.039 13.9 6.1 0.41 10.6 0.4 2.1 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF2431 PF10354.4 gi|15669084|ref|NP_247889.1| - 0.04 13.8 1.2 0.074 13.0 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF2431) DUF972 PF06156.8 gi|15669084|ref|NP_247889.1| - 0.041 14.2 9.6 0.078 13.3 1.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF972) HCR PF07111.7 gi|15669084|ref|NP_247889.1| - 0.042 11.8 1.1 0.044 11.7 0.8 1.1 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) SPX PF03105.14 gi|15669084|ref|NP_247889.1| - 0.043 13.6 0.1 0.062 13.0 0.1 1.4 1 1 0 1 1 1 0 SPX domain Cob_adeno_trans PF01923.13 gi|15669084|ref|NP_247889.1| - 0.045 13.5 0.4 0.057 13.2 0.3 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase V_ATPase_I PF01496.14 gi|15669084|ref|NP_247889.1| - 0.049 11.5 5.3 0.054 11.3 3.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc24 PF08286.6 gi|15669084|ref|NP_247889.1| - 0.05 13.2 11.5 6.5 6.4 7.7 2.5 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 BLOC1_2 PF10046.4 gi|15669084|ref|NP_247889.1| - 0.052 13.6 7.2 0.17 12.0 1.1 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Herpes_U30 PF04523.8 gi|15669084|ref|NP_247889.1| - 0.053 10.9 0.7 0.055 10.9 0.5 1.0 1 0 0 1 1 1 0 Herpes virus tegument protein U30 DUF2450 PF10475.4 gi|15669084|ref|NP_247889.1| - 0.054 12.3 4.0 0.069 12.0 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function N-terminal domain (DUF2450) CCDC155 PF14662.1 gi|15669084|ref|NP_247889.1| - 0.057 13.0 7.3 0.066 12.8 4.1 1.7 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 RasGAP_C PF03836.10 gi|15669084|ref|NP_247889.1| - 0.058 13.0 2.1 0.088 12.4 1.0 1.7 1 1 0 1 1 1 0 RasGAP C-terminus IncA PF04156.9 gi|15669084|ref|NP_247889.1| - 0.058 12.9 5.9 0.18 11.3 4.1 1.7 1 1 0 1 1 1 0 IncA protein zf-C4H2 PF10146.4 gi|15669084|ref|NP_247889.1| - 0.064 13.2 8.1 0.083 12.9 5.6 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein GAS PF13851.1 gi|15669084|ref|NP_247889.1| - 0.071 12.3 8.5 0.11 11.6 0.5 2.1 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Prominin PF05478.6 gi|15669084|ref|NP_247889.1| - 0.073 10.5 2.4 0.089 10.3 1.7 1.1 1 0 0 1 1 1 0 Prominin COG2 PF06148.6 gi|15669084|ref|NP_247889.1| - 0.075 12.8 5.2 0.063 13.1 1.5 2.2 2 1 0 2 2 1 0 COG (conserved oligomeric Golgi) complex component, COG2 CorA PF01544.13 gi|15669084|ref|NP_247889.1| - 0.079 11.9 6.6 0.11 11.4 4.6 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein HlyD PF00529.15 gi|15669084|ref|NP_247889.1| - 0.086 12.1 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 HlyD family secretion protein TMF_TATA_bd PF12325.3 gi|15669084|ref|NP_247889.1| - 0.09 12.5 11.4 0.048 13.3 4.7 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DMPK_coil PF08826.5 gi|15669084|ref|NP_247889.1| - 0.094 12.6 0.6 0.094 12.6 0.4 2.8 3 0 0 3 3 2 0 DMPK coiled coil domain like Vps5 PF09325.5 gi|15669084|ref|NP_247889.1| - 0.1 11.8 2.3 1 8.5 0.3 2.1 1 1 1 2 2 2 0 Vps5 C terminal like Mnd1 PF03962.10 gi|15669084|ref|NP_247889.1| - 0.11 12.1 2.5 0.18 11.4 1.7 1.5 1 1 0 1 1 1 0 Mnd1 family Cast PF10174.4 gi|15669084|ref|NP_247889.1| - 0.12 10.3 6.3 0.19 9.7 0.5 1.6 1 1 1 2 2 2 0 RIM-binding protein of the cytomatrix active zone DUF3829 PF12889.2 gi|15669084|ref|NP_247889.1| - 0.12 11.5 2.8 0.15 11.2 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) DUF2681 PF10883.3 gi|15669084|ref|NP_247889.1| - 0.12 12.5 0.7 1.6 8.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) Med9 PF07544.8 gi|15669084|ref|NP_247889.1| - 0.13 12.0 2.3 1.3 8.8 0.3 2.2 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 ArsA_ATPase PF02374.10 gi|15669084|ref|NP_247889.1| - 0.13 11.2 2.8 0.18 10.7 1.9 1.4 1 1 0 1 1 1 0 Anion-transporting ATPase AKNA PF12443.3 gi|15669084|ref|NP_247889.1| - 0.14 12.1 2.0 1.4 8.9 0.0 2.7 2 1 1 3 3 3 0 AT-hook-containing transcription factor Lebercilin PF15619.1 gi|15669084|ref|NP_247889.1| - 0.15 11.4 4.9 0.74 9.2 0.5 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Baculo_PEP_C PF04513.7 gi|15669084|ref|NP_247889.1| - 0.16 11.7 8.7 0.2 11.4 1.3 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus CENP-F_N PF10481.4 gi|15669084|ref|NP_247889.1| - 0.18 11.1 3.0 0.49 9.7 2.1 1.6 1 1 0 1 1 1 0 Cenp-F N-terminal domain TBPIP PF07106.8 gi|15669084|ref|NP_247889.1| - 0.2 11.1 11.6 0.49 9.9 4.9 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) FlxA PF14282.1 gi|15669084|ref|NP_247889.1| - 0.22 11.4 1.9 12 5.9 0.1 2.3 2 0 0 2 2 2 0 FlxA-like protein ATG16 PF08614.6 gi|15669084|ref|NP_247889.1| - 0.25 11.1 7.5 1.2 8.9 1.2 2.2 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Snapin_Pallidin PF14712.1 gi|15669084|ref|NP_247889.1| - 0.26 11.5 5.3 1.7 9.0 3.2 2.3 1 1 0 1 1 1 0 Snapin/Pallidin Syntaxin-6_N PF09177.6 gi|15669084|ref|NP_247889.1| - 0.34 11.3 4.7 2.5 8.5 0.4 2.6 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Seryl_tRNA_N PF02403.17 gi|15669084|ref|NP_247889.1| - 0.35 10.9 6.6 2.4 8.2 0.7 2.7 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF1664 PF07889.7 gi|15669084|ref|NP_247889.1| - 0.36 10.6 5.2 0.53 10.1 0.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF2730 PF10805.3 gi|15669084|ref|NP_247889.1| - 0.38 10.4 7.2 0.16 11.7 0.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) bZIP_2 PF07716.10 gi|15669084|ref|NP_247889.1| - 0.4 10.5 8.0 0.66 9.8 0.8 2.5 2 1 0 2 2 2 0 Basic region leucine zipper NPV_P10 PF05531.7 gi|15669084|ref|NP_247889.1| - 0.44 10.8 6.7 16 5.8 4.6 2.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.7 gi|15669084|ref|NP_247889.1| - 0.44 10.2 6.0 1.5 8.5 3.9 2.0 1 1 0 1 1 1 0 Laminin Domain II THOC7 PF05615.8 gi|15669084|ref|NP_247889.1| - 0.46 10.7 7.0 0.39 10.9 0.6 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 DUF1640 PF07798.6 gi|15669084|ref|NP_247889.1| - 0.49 10.4 9.2 0.42 10.6 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) XhlA PF10779.4 gi|15669084|ref|NP_247889.1| - 0.49 10.3 12.1 0.54 10.2 1.8 2.6 2 1 0 2 2 2 0 Haemolysin XhlA Kinetocho_Slk19 PF12709.2 gi|15669084|ref|NP_247889.1| - 0.49 10.4 5.5 6.9 6.8 0.6 2.3 2 0 0 2 2 2 0 Central kinetochore-associated DUF4446 PF14584.1 gi|15669084|ref|NP_247889.1| - 0.57 9.9 3.6 2.3 8.0 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4200 PF13863.1 gi|15669084|ref|NP_247889.1| - 0.58 10.1 5.1 2.5 8.0 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) YvrJ PF12841.2 gi|15669084|ref|NP_247889.1| - 0.64 9.3 4.2 1.4 8.2 0.2 2.7 2 0 0 2 2 2 0 YvrJ protein family Ax_dynein_light PF10211.4 gi|15669084|ref|NP_247889.1| - 0.72 9.6 7.0 1.1 9.1 0.5 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain APG6 PF04111.7 gi|15669084|ref|NP_247889.1| - 0.73 8.8 6.8 0.59 9.1 0.4 2.0 1 1 1 2 2 2 0 Autophagy protein Apg6 TMF_DNA_bd PF12329.3 gi|15669084|ref|NP_247889.1| - 0.77 9.6 15.1 0.28 11.0 2.1 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Sec2p PF06428.6 gi|15669084|ref|NP_247889.1| - 0.85 9.5 6.1 3.9 7.3 1.1 2.4 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Fzo_mitofusin PF04799.8 gi|15669084|ref|NP_247889.1| - 1 8.7 5.5 4.9 6.4 0.2 2.2 1 1 1 2 2 2 0 fzo-like conserved region EMP24_GP25L PF01105.19 gi|15669084|ref|NP_247889.1| - 1 9.0 6.6 2 8.0 0.8 2.8 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD DUF904 PF06005.7 gi|15669084|ref|NP_247889.1| - 1.2 9.4 14.7 0.25 11.6 2.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF904) DUF948 PF06103.6 gi|15669084|ref|NP_247889.1| - 1.2 9.0 5.4 5.7 6.8 0.4 2.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) ORF6C PF10552.4 gi|15669084|ref|NP_247889.1| - 1.3 8.7 8.1 6.8 6.4 0.4 2.6 1 1 0 2 2 2 0 ORF6C domain Herpes_BLRF2 PF05812.7 gi|15669084|ref|NP_247889.1| - 2.5 7.9 7.5 1.7 8.4 0.6 2.3 2 1 0 2 2 2 0 Herpesvirus BLRF2 protein TPR_MLP1_2 PF07926.7 gi|15669084|ref|NP_247889.1| - 2.9 7.6 8.8 9.2 6.0 5.8 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Cep57_CLD_2 PF14197.1 gi|15669084|ref|NP_247889.1| - 2.9 7.8 6.9 1.4 8.9 0.5 2.5 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 CCDC92 PF14916.1 gi|15669084|ref|NP_247889.1| - 3 7.5 6.2 4.6 6.9 0.8 2.3 2 0 0 2 2 2 0 Coiled-coil domain of unknown function DUF2497 PF10691.4 gi|15669084|ref|NP_247889.1| - 3.1 7.8 11.4 0.85 9.6 3.4 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2497) IFP_35_N PF07334.8 gi|15669084|ref|NP_247889.1| - 4.4 7.3 6.1 8.8 6.3 1.8 2.5 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DASH_Dad3 PF08656.5 gi|15669084|ref|NP_247889.1| - 6.4 6.5 10.3 11 5.8 1.2 3.1 2 2 0 2 2 2 0 DASH complex subunit Dad3 DivIVA PF05103.8 gi|15669084|ref|NP_247889.1| - 8.1 6.5 9.8 13 5.8 0.8 2.5 2 1 0 2 2 1 0 DivIVA protein Arch_fla_DE PF04659.8 gi|15669085|ref|NP_247890.1| - 7.7e-36 121.9 0.6 2.7e-35 120.1 0.0 2.2 2 0 0 2 2 2 1 Archaeal flagella protein DUF3636 PF12331.3 gi|15669085|ref|NP_247890.1| - 0.016 14.7 0.2 0.031 13.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) Arch_fla_DE PF04659.8 gi|15669086|ref|NP_247891.1| - 7.1e-35 118.8 0.0 9.3e-35 118.4 0.0 1.2 1 0 0 1 1 1 1 Archaeal flagella protein DUF3730 PF12530.3 gi|15669086|ref|NP_247891.1| - 0.014 15.3 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) DUF1874 PF08960.5 gi|15669086|ref|NP_247891.1| - 0.059 13.1 0.0 0.069 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1874) Arch_flagellin PF01917.11 gi|15669087|ref|NP_247892.1| - 4.9e-06 26.2 2.5 9.3e-06 25.3 1.7 1.6 1 1 0 1 1 1 1 Archaebacterial flagellin Col_cuticle_N PF01484.12 gi|15669087|ref|NP_247892.1| - 0.02 14.5 1.0 0.035 13.8 0.7 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain Cadherin_pro PF08758.6 gi|15669087|ref|NP_247892.1| - 0.045 13.5 0.0 0.091 12.5 0.0 1.5 1 1 0 1 1 1 0 Cadherin prodomain like Arch_flagellin PF01917.11 gi|15669088|ref|NP_247893.1| - 2.4e-19 69.7 5.7 4.3e-19 68.8 4.0 1.4 1 1 0 1 1 1 1 Archaebacterial flagellin Membrane_bind PF14564.1 gi|15669088|ref|NP_247893.1| - 0.013 15.6 1.0 0.055 13.6 0.2 1.9 1 1 1 2 2 2 0 Membrane binding DUF1573 PF07610.6 gi|15669088|ref|NP_247893.1| - 0.081 12.5 0.1 7.1 6.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1573) KaiC PF06745.8 gi|15669089|ref|NP_247894.1| - 1.1e-14 54.1 0.2 1.5e-14 53.7 0.1 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|15669089|ref|NP_247894.1| - 9.6e-10 38.1 0.0 1.7e-09 37.3 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|15669089|ref|NP_247894.1| - 0.001 19.1 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_35 PF14516.1 gi|15669089|ref|NP_247894.1| - 0.0014 17.3 0.0 0.0019 16.9 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain AAA PF00004.24 gi|15669089|ref|NP_247894.1| - 0.002 18.2 0.3 0.005 17.0 0.2 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad51 PF08423.6 gi|15669089|ref|NP_247894.1| - 0.0034 16.3 0.1 0.0076 15.1 0.1 1.8 1 1 0 1 1 1 1 Rad51 AAA_14 PF13173.1 gi|15669089|ref|NP_247894.1| - 0.0045 16.8 1.8 0.042 13.7 1.2 2.1 1 1 0 1 1 1 1 AAA domain RecA PF00154.16 gi|15669089|ref|NP_247894.1| - 0.0061 15.6 0.1 0.074 12.1 0.0 2.0 2 0 0 2 2 2 1 recA bacterial DNA recombination protein NACHT PF05729.7 gi|15669089|ref|NP_247894.1| - 0.013 15.2 0.0 0.033 13.8 0.0 1.8 1 1 0 1 1 1 0 NACHT domain Arch_ATPase PF01637.13 gi|15669089|ref|NP_247894.1| - 0.015 15.0 0.5 0.023 14.3 0.4 1.3 1 0 0 1 1 1 0 Archaeal ATPase PAXNEB PF05625.6 gi|15669089|ref|NP_247894.1| - 0.017 13.9 0.0 0.031 13.1 0.0 1.4 1 0 0 1 1 1 0 PAXNEB protein DAP3 PF10236.4 gi|15669089|ref|NP_247894.1| - 0.02 13.8 0.0 0.088 11.7 0.0 1.8 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 IstB_IS21 PF01695.12 gi|15669089|ref|NP_247894.1| - 0.033 13.5 0.0 0.085 12.2 0.0 1.7 1 1 1 2 2 2 0 IstB-like ATP binding protein KTI12 PF08433.5 gi|15669089|ref|NP_247894.1| - 0.045 12.9 0.0 0.079 12.1 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 UPF0079 PF02367.12 gi|15669089|ref|NP_247894.1| - 0.069 12.7 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_28 PF13521.1 gi|15669089|ref|NP_247894.1| - 0.094 12.6 0.0 0.15 12.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain DnaB_C PF03796.10 gi|15669089|ref|NP_247894.1| - 0.11 11.3 0.0 0.19 10.5 0.0 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain T2SE PF00437.15 gi|15669090|ref|NP_247895.1| - 1e-46 159.0 0.0 1.7e-46 158.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|15669090|ref|NP_247895.1| - 9.4e-05 21.8 0.0 0.00029 20.3 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|15669090|ref|NP_247895.1| - 0.014 15.5 0.0 0.06 13.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|15669090|ref|NP_247895.1| - 0.022 15.0 0.0 0.045 14.0 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.1 gi|15669090|ref|NP_247895.1| - 0.041 14.7 0.4 1.8 9.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain DUF4303 PF14136.1 gi|15669090|ref|NP_247895.1| - 0.091 12.4 0.0 0.17 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) FtsK_SpoIIIE PF01580.13 gi|15669090|ref|NP_247895.1| - 0.099 12.1 0.0 0.27 10.6 0.0 1.7 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_16 PF13191.1 gi|15669090|ref|NP_247895.1| - 0.17 11.8 0.0 0.39 10.6 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.1 gi|15669090|ref|NP_247895.1| - 0.26 11.5 4.0 0.14 12.4 0.7 1.9 2 0 0 2 2 2 0 AAA domain T2SF PF00482.18 gi|15669091|ref|NP_247896.1| - 4.1e-20 71.9 0.1 2e-12 47.1 0.1 3.9 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F Arc_PepC_II PF06847.6 gi|15669092|ref|NP_247897.1| - 1.6e-20 73.2 0.1 1.6e-20 73.2 0.1 2.9 2 1 1 3 3 3 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.13 gi|15669092|ref|NP_247897.1| - 7.1e-16 58.2 12.5 1.4e-15 57.3 8.3 1.7 1 1 0 1 1 1 1 Type IV leader peptidase family YqzM PF14141.1 gi|15669092|ref|NP_247897.1| - 0.18 11.6 7.8 0.72 9.6 5.4 2.1 1 0 0 1 1 1 0 YqzM-like protein Dynein_light PF01221.13 gi|15669094|ref|NP_247899.1| - 0.045 13.7 0.1 0.098 12.6 0.1 1.5 1 0 0 1 1 1 0 Dynein light chain type 1 DUF1495 PF07381.6 gi|15669095|ref|NP_247900.1| - 2.1e-37 126.6 0.8 2.4e-37 126.4 0.6 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) DUF505 PF04458.7 gi|15669095|ref|NP_247900.1| - 0.023 12.8 0.0 0.033 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Methyltransf_31 PF13847.1 gi|15669096|ref|NP_247901.1| - 3.1e-18 65.7 1.9 6e-17 61.6 0.1 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669096|ref|NP_247901.1| - 3.3e-13 49.9 0.1 2.1e-12 47.3 0.0 2.3 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|15669096|ref|NP_247901.1| - 6e-10 39.4 0.0 2.3e-09 37.6 0.0 2.0 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669096|ref|NP_247901.1| - 4.3e-09 36.2 0.0 6.9e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669096|ref|NP_247901.1| - 8.1e-07 29.6 0.0 2.5e-06 28.0 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15669096|ref|NP_247901.1| - 1.9e-06 28.1 0.0 4.3e-06 27.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|15669096|ref|NP_247901.1| - 3.5e-06 26.6 0.0 5.2e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.13 gi|15669096|ref|NP_247901.1| - 7.1e-06 25.2 0.2 2.7e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family CMAS PF02353.15 gi|15669096|ref|NP_247901.1| - 0.0011 18.1 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|15669096|ref|NP_247901.1| - 0.0071 15.7 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|15669096|ref|NP_247901.1| - 0.015 14.4 0.0 0.03 13.4 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|15669096|ref|NP_247901.1| - 0.21 11.6 0.0 0.39 10.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Radical_SAM PF04055.16 gi|15669097|ref|NP_247902.1| - 1.1e-19 71.2 0.3 1.1e-16 61.5 0.1 2.1 1 1 1 2 2 2 2 Radical SAM superfamily Fer4_12 PF13353.1 gi|15669097|ref|NP_247902.1| - 2.6e-13 50.2 0.8 4.6e-13 49.4 0.6 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|15669097|ref|NP_247902.1| - 8e-12 45.2 0.8 1.6e-11 44.2 0.6 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain PUF PF00806.14 gi|15669097|ref|NP_247902.1| - 0.021 14.2 0.4 0.054 12.9 0.3 1.7 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat CobN-Mg_chel PF02514.11 gi|15669098|ref|NP_247903.1| - 0 1314.0 0.0 0 1313.8 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase LexA_DNA_bind PF01726.11 gi|15669098|ref|NP_247903.1| - 0.0006 19.3 0.0 0.0018 17.7 0.0 1.8 1 0 0 1 1 1 1 LexA DNA binding domain HTH_36 PF13730.1 gi|15669098|ref|NP_247903.1| - 0.0081 16.2 0.0 0.097 12.8 0.0 3.0 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.17 gi|15669098|ref|NP_247903.1| - 0.14 11.8 0.0 0.46 10.2 0.0 1.8 1 0 0 1 1 1 0 MarR family Plasmid_stabil PF05016.9 gi|15669099|ref|NP_247904.1| - 2.9e-13 50.0 0.3 3.2e-13 49.8 0.2 1.0 1 0 0 1 1 1 1 Plasmid stabilisation system protein Gp49 PF05973.9 gi|15669099|ref|NP_247904.1| - 0.014 15.4 0.1 0.017 15.1 0.1 1.2 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) Plasmid_killer PF05015.8 gi|15669099|ref|NP_247904.1| - 0.071 13.2 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Plasmid maintenance system killer protein VWA_2 PF13519.1 gi|15669100|ref|NP_247905.1| - 1.7e-10 41.2 0.0 2e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|15669100|ref|NP_247905.1| - 0.0018 17.9 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.16 gi|15669101|ref|NP_247906.1| - 1.9e-11 43.5 0.1 1.1e-06 27.9 0.0 2.6 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|15669101|ref|NP_247906.1| - 3.8e-10 39.6 0.2 5.6e-06 26.1 0.0 2.8 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|15669101|ref|NP_247906.1| - 3e-05 22.9 9.5 3.7e-05 22.6 1.0 3.4 3 2 0 3 3 3 1 MCM2/3/5 family AAA_16 PF13191.1 gi|15669101|ref|NP_247906.1| - 0.0005 20.1 0.0 0.017 15.1 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|15669101|ref|NP_247906.1| - 0.00059 19.9 0.1 0.0049 17.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain HSDR_N PF04313.9 gi|15669101|ref|NP_247906.1| - 0.0039 16.9 0.7 0.0088 15.7 0.4 1.7 1 1 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) Sigma54_activat PF00158.21 gi|15669101|ref|NP_247906.1| - 0.0053 16.2 0.0 2.6 7.4 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.6 gi|15669101|ref|NP_247906.1| - 0.051 13.1 0.0 3.5 7.2 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase_2 PF13335.1 gi|15669101|ref|NP_247906.1| - 0.052 13.9 0.2 0.14 12.5 0.2 1.8 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activ_2 PF14532.1 gi|15669101|ref|NP_247906.1| - 0.058 13.4 0.1 11 6.0 0.0 3.0 2 1 1 3 3 3 0 Sigma-54 interaction domain AAA PF00004.24 gi|15669101|ref|NP_247906.1| - 0.063 13.4 0.9 0.54 10.4 0.1 2.9 2 2 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|15669101|ref|NP_247906.1| - 0.15 12.8 7.5 3.4 8.5 1.8 3.3 2 1 0 2 2 2 0 AAA domain Metallophos_2 PF12850.2 gi|15669102|ref|NP_247907.1| - 3.1e-28 98.6 0.0 6.3e-28 97.5 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15669102|ref|NP_247907.1| - 9.8e-16 57.7 2.1 1.3e-15 57.3 1.4 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.6 gi|15669102|ref|NP_247907.1| - 0.031 12.3 0.1 0.046 11.7 0.1 1.3 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase DFP PF04127.10 gi|15669103|ref|NP_247908.1| - 1.6e-49 168.0 0.1 7e-49 165.9 0.0 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|15669103|ref|NP_247908.1| - 9.7e-29 99.6 1.8 5.4e-28 97.2 0.1 2.5 2 1 0 2 2 2 1 Flavoprotein F420_oxidored PF03807.12 gi|15669103|ref|NP_247908.1| - 0.055 13.9 1.2 3.6 8.0 0.2 3.9 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent PIN PF01850.16 gi|15669104|ref|NP_247909.1| - 1.9e-13 50.8 0.4 2.8e-13 50.2 0.3 1.2 1 0 0 1 1 1 1 PIN domain Pox_VLTF3 PF04947.9 gi|15669104|ref|NP_247909.1| - 0.023 14.2 6.3 0.023 14.2 3.8 1.5 1 1 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like PIN_2 PF10130.4 gi|15669104|ref|NP_247909.1| - 0.06 13.3 0.1 0.079 12.9 0.0 1.4 1 1 0 1 1 1 0 PIN domain Bin3 PF06859.7 gi|15669104|ref|NP_247909.1| - 0.088 12.8 0.1 0.22 11.5 0.0 1.8 2 1 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) Galactosyl_T PF01762.16 gi|15669104|ref|NP_247909.1| - 0.1 12.1 0.2 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Galactosyltransferase DUF2972 PF11186.3 gi|15669104|ref|NP_247909.1| - 0.66 9.8 11.9 0.69 9.7 1.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2972) NAD_binding_3 PF03447.11 gi|15669105|ref|NP_247910.1| - 1.7e-28 99.3 0.9 6.5e-28 97.4 0.1 2.2 3 0 0 3 3 3 1 Homoserine dehydrogenase, NAD binding domain DUF108 PF01958.13 gi|15669105|ref|NP_247910.1| - 9.1e-28 96.3 0.5 1.3e-27 95.8 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 GFO_IDH_MocA PF01408.17 gi|15669105|ref|NP_247910.1| - 1.5e-07 31.9 0.2 4.5e-07 30.4 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.12 gi|15669105|ref|NP_247910.1| - 1.1e-06 28.9 1.1 1.1e-06 28.9 0.8 2.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.15 gi|15669105|ref|NP_247910.1| - 4.3e-05 23.4 1.1 6.3e-05 22.8 0.2 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.10 gi|15669105|ref|NP_247910.1| - 0.0003 20.6 0.1 0.00054 19.8 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Semialdhyde_dh PF01118.19 gi|15669105|ref|NP_247910.1| - 0.014 15.6 0.1 0.03 14.6 0.1 1.6 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Vps16_C PF04840.7 gi|15669105|ref|NP_247910.1| - 0.048 12.6 0.3 0.067 12.1 0.2 1.1 1 0 0 1 1 1 0 Vps16, C-terminal region Gp_dh_N PF00044.19 gi|15669105|ref|NP_247910.1| - 0.084 12.8 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PRC PF05239.11 gi|15669106|ref|NP_247911.1| - 1.3e-16 60.1 0.5 1.5e-16 60.0 0.3 1.0 1 0 0 1 1 1 1 PRC-barrel domain NAD_kinase PF01513.16 gi|15669107|ref|NP_247912.1| - 1.7e-74 250.1 1.3 4.1e-74 248.9 0.9 1.7 1 0 0 1 1 1 1 ATP-NAD kinase Inositol_P PF00459.20 gi|15669107|ref|NP_247912.1| - 3.2e-26 92.2 0.1 4.2e-16 59.0 0.0 2.1 2 0 0 2 2 2 2 Inositol monophosphatase family FBPase PF00316.15 gi|15669107|ref|NP_247912.1| - 0.0016 17.3 0.0 0.0024 16.7 0.0 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase IGPS PF00218.16 gi|15669108|ref|NP_247913.1| - 1.7e-70 236.9 3.5 1.9e-70 236.8 2.4 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.14 gi|15669108|ref|NP_247913.1| - 0.0011 18.5 2.7 0.0021 17.6 0.1 2.2 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain CMV_1a PF12467.3 gi|15669108|ref|NP_247913.1| - 0.12 12.7 0.4 0.18 12.1 0.3 1.3 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein family PDZ PF00595.19 gi|15669108|ref|NP_247913.1| - 1.3 9.2 4.2 4.6 7.4 0.1 2.7 2 1 1 3 3 3 0 PDZ domain (Also known as DHR or GLGF) DUF552 PF04472.7 gi|15669109|ref|NP_247914.1| - 1.9e-11 43.7 0.8 3e-11 43.0 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF552) PIF1 PF05970.9 gi|15669109|ref|NP_247914.1| - 0.052 12.4 0.1 0.063 12.2 0.1 1.1 1 0 0 1 1 1 0 PIF1-like helicase NPHI_C PF08469.5 gi|15669109|ref|NP_247914.1| - 0.072 12.9 2.6 0.14 12.0 0.4 2.3 1 1 1 2 2 2 0 Nucleoside triphosphatase I C-terminal MMR_HSR1 PF01926.18 gi|15669110|ref|NP_247915.1| - 3.6e-20 72.0 0.0 5.1e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15669110|ref|NP_247915.1| - 1.7e-11 43.6 0.0 2.4e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|15669110|ref|NP_247915.1| - 2.5e-10 40.1 0.0 7.8e-08 31.9 0.0 2.1 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.18 gi|15669110|ref|NP_247915.1| - 5.1e-10 39.4 0.1 9.1e-05 22.3 0.0 2.3 2 0 0 2 2 2 2 Dynamin family Gtr1_RagA PF04670.7 gi|15669110|ref|NP_247915.1| - 2.7e-07 29.9 0.0 3.8e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Arf PF00025.16 gi|15669110|ref|NP_247915.1| - 1.4e-06 27.6 0.1 0.024 13.8 0.0 2.2 2 0 0 2 2 2 2 ADP-ribosylation factor family Miro PF08477.8 gi|15669110|ref|NP_247915.1| - 2.6e-05 24.6 0.1 0.00012 22.5 0.0 2.0 1 1 0 1 1 1 1 Miro-like protein cobW PF02492.14 gi|15669110|ref|NP_247915.1| - 0.00012 21.5 0.0 0.00023 20.6 0.0 1.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.13 gi|15669110|ref|NP_247915.1| - 0.00041 19.4 0.4 0.45 9.4 0.0 2.1 1 1 0 2 2 2 2 Septin PduV-EutP PF10662.4 gi|15669110|ref|NP_247915.1| - 0.0011 18.4 0.0 0.12 11.8 0.0 2.2 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.22 gi|15669110|ref|NP_247915.1| - 0.0091 16.2 0.0 0.0095 16.2 0.0 1.3 1 1 0 1 1 1 1 ABC transporter AAA_28 PF13521.1 gi|15669110|ref|NP_247915.1| - 0.0096 15.8 0.1 0.021 14.8 0.0 1.5 2 0 0 2 2 2 1 AAA domain G-alpha PF00503.15 gi|15669110|ref|NP_247915.1| - 0.012 14.3 0.1 0.55 8.8 0.1 2.2 2 0 0 2 2 2 0 G-protein alpha subunit Ras PF00071.17 gi|15669110|ref|NP_247915.1| - 0.013 14.8 0.1 1.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Ras family ATP_bind_1 PF03029.12 gi|15669110|ref|NP_247915.1| - 0.026 14.0 0.1 0.19 11.2 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.1 gi|15669110|ref|NP_247915.1| - 0.034 14.4 0.3 0.05 13.9 0.2 1.5 1 1 0 1 1 1 0 AAA domain MutL PF13941.1 gi|15669110|ref|NP_247915.1| - 0.035 12.4 0.0 0.039 12.2 0.0 1.1 1 0 0 1 1 1 0 MutL protein DUF258 PF03193.11 gi|15669110|ref|NP_247915.1| - 0.05 12.7 0.0 0.17 11.0 0.0 1.9 3 0 0 3 3 3 0 Protein of unknown function, DUF258 NOG1 PF06858.9 gi|15669110|ref|NP_247915.1| - 0.057 13.3 0.2 0.21 11.4 0.0 2.0 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) AAA_29 PF13555.1 gi|15669110|ref|NP_247915.1| - 0.061 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.1 gi|15669110|ref|NP_247915.1| - 0.098 12.2 0.0 0.14 11.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain DUF1743 PF08489.6 gi|15669111|ref|NP_247916.1| - 2.1e-30 104.8 2.0 5.5e-29 100.3 0.0 2.7 2 1 1 3 3 3 2 Domain of unknown function (DUF1743) CBS PF00571.23 gi|15669112|ref|NP_247917.1| - 6.8e-34 115.3 5.1 1.6e-16 59.7 0.3 2.1 2 0 0 2 2 2 2 CBS domain Cache_3 PF14827.1 gi|15669112|ref|NP_247917.1| - 0.01 15.7 0.7 3 7.7 0.0 2.3 1 1 1 2 2 2 0 Sensory domain of two-component sensor kinase Thioredoxin_3 PF13192.1 gi|15669112|ref|NP_247917.1| - 0.033 14.0 0.4 0.033 14.0 0.3 2.1 2 1 0 2 2 2 0 Thioredoxin domain DUF1071 PF06378.6 gi|15669112|ref|NP_247917.1| - 0.086 11.9 0.8 3.9 6.5 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1071) DUF3659 PF12396.3 gi|15669112|ref|NP_247917.1| - 0.3 10.8 2.0 5.4 6.7 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) Methylase_S PF01420.14 gi|15669113|ref|NP_247918.1| - 0.0099 15.8 1.3 0.024 14.6 0.9 1.7 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain 7TM-7TMR_HD PF07698.6 gi|15669113|ref|NP_247918.1| - 2.1 7.7 26.0 0.18 11.2 7.5 2.5 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase CbiA PF01656.18 gi|15669114|ref|NP_247919.1| - 4.5e-19 68.6 1.1 7.5e-19 67.8 0.3 1.6 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15669114|ref|NP_247919.1| - 3.3e-11 43.3 0.1 1.3e-10 41.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.13 gi|15669114|ref|NP_247919.1| - 2.1e-08 33.6 3.6 1.8e-05 24.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.6 gi|15669114|ref|NP_247919.1| - 1.8e-06 27.2 0.0 2.9e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|15669114|ref|NP_247919.1| - 6e-06 25.5 2.4 1.5e-05 24.1 0.1 2.5 3 0 0 3 3 3 1 Anion-transporting ATPase VirC1 PF07015.6 gi|15669114|ref|NP_247919.1| - 9.7e-05 21.5 0.3 0.00017 20.7 0.2 1.4 1 0 0 1 1 1 1 VirC1 protein YhjQ PF06564.7 gi|15669114|ref|NP_247919.1| - 0.00023 20.6 0.0 0.001 18.4 0.0 2.0 1 1 0 1 1 1 1 YhjQ protein AAA_25 PF13481.1 gi|15669114|ref|NP_247919.1| - 0.0015 17.9 0.3 0.0053 16.1 0.3 1.9 2 1 0 2 2 2 1 AAA domain CPSase_L_D3 PF02787.14 gi|15669114|ref|NP_247919.1| - 0.0027 17.4 1.2 0.0045 16.7 0.5 1.6 2 0 0 2 2 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PhoH PF02562.11 gi|15669114|ref|NP_247919.1| - 0.005 16.1 0.9 0.0076 15.4 0.2 1.6 2 0 0 2 2 2 1 PhoH-like protein AAA_19 PF13245.1 gi|15669114|ref|NP_247919.1| - 0.021 14.5 0.2 0.078 12.7 0.2 1.8 2 0 0 2 2 2 0 Part of AAA domain FliG_C PF01706.11 gi|15669114|ref|NP_247919.1| - 0.027 14.4 0.4 0.046 13.6 0.3 1.4 1 0 0 1 1 1 0 FliG C-terminal domain DUF2779 PF11074.3 gi|15669114|ref|NP_247919.1| - 0.07 13.1 0.1 0.14 12.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) APS_kinase PF01583.15 gi|15669114|ref|NP_247919.1| - 0.088 12.4 0.1 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase ResIII PF04851.10 gi|15669114|ref|NP_247919.1| - 0.14 12.0 1.9 0.41 10.4 0.1 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit SRP54 PF00448.17 gi|15669114|ref|NP_247919.1| - 0.15 11.5 1.1 0.36 10.2 0.6 1.8 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain HxlR PF01638.12 gi|15669115|ref|NP_247920.1| - 8.4e-11 41.3 0.4 2.1e-10 40.0 0.3 1.6 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.1 gi|15669115|ref|NP_247920.1| - 1.4e-09 37.6 1.1 2e-09 37.0 0.8 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_12 PF08461.5 gi|15669115|ref|NP_247920.1| - 0.00055 19.5 0.2 0.0008 19.0 0.1 1.2 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain DUF4364 PF14277.1 gi|15669115|ref|NP_247920.1| - 0.0013 18.3 0.1 0.0015 18.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_Crp_2 PF13545.1 gi|15669115|ref|NP_247920.1| - 0.0019 17.9 0.0 0.0032 17.2 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain BpuJI_N PF11564.3 gi|15669115|ref|NP_247920.1| - 0.0042 16.0 0.3 0.0048 15.8 0.2 1.0 1 0 0 1 1 1 1 Restriction endonuclease BpuJI - N terminal DUF61 PF01886.11 gi|15669115|ref|NP_247920.1| - 0.0043 16.8 0.5 0.0055 16.5 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function DUF61 HTH_24 PF13412.1 gi|15669115|ref|NP_247920.1| - 0.0065 15.8 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HemN_C PF06969.11 gi|15669115|ref|NP_247920.1| - 0.089 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 HemN C-terminal domain DUF2513 PF10711.4 gi|15669115|ref|NP_247920.1| - 0.13 12.3 0.4 0.2 11.7 0.3 1.3 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) Peptidase_C23 PF05379.6 gi|15669115|ref|NP_247920.1| - 0.14 12.1 0.1 0.82 9.6 0.1 1.9 1 1 1 2 2 2 0 Carlavirus endopeptidase Maf PF02545.9 gi|15669116|ref|NP_247921.1| - 0.013 14.6 0.3 0.013 14.6 0.2 1.0 1 0 0 1 1 1 0 Maf-like protein SPARC_Ca_bdg PF10591.4 gi|15669116|ref|NP_247921.1| - 0.071 13.1 0.8 0.12 12.4 0.5 1.3 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region BamHI PF02923.10 gi|15669116|ref|NP_247921.1| - 0.091 12.6 0.3 0.097 12.5 0.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BamHI NIF3 PF01784.13 gi|15669117|ref|NP_247922.1| - 6.3e-57 192.9 0.2 7.5e-57 192.6 0.1 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) Leptin PF02024.10 gi|15669117|ref|NP_247922.1| - 0.098 12.3 0.0 10 5.7 0.0 2.2 2 0 0 2 2 2 0 Leptin MTS PF05175.9 gi|15669118|ref|NP_247923.1| - 1.1e-25 90.0 0.0 1.2e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|15669118|ref|NP_247923.1| - 1.3e-19 70.3 0.0 1.7e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669118|ref|NP_247923.1| - 6.1e-17 61.6 0.1 7.6e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|15669118|ref|NP_247923.1| - 1.6e-16 60.2 0.5 2.6e-16 59.6 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.2 gi|15669118|ref|NP_247923.1| - 1.2e-15 57.9 0.0 1.8e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|15669118|ref|NP_247923.1| - 3.5e-09 36.5 0.1 5.1e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein DUF43 PF01861.11 gi|15669118|ref|NP_247923.1| - 1.1e-07 31.1 0.0 1.5e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF43 Methyltransf_23 PF13489.1 gi|15669118|ref|NP_247923.1| - 1.6e-07 31.1 0.0 3e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|15669118|ref|NP_247923.1| - 1.7e-07 31.5 0.0 5.3e-07 30.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669118|ref|NP_247923.1| - 3.1e-07 30.7 0.0 5.8e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15669118|ref|NP_247923.1| - 5.8e-07 29.8 0.0 8.5e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669118|ref|NP_247923.1| - 1.9e-06 27.3 0.0 2.9e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltrans_SAM PF10672.4 gi|15669118|ref|NP_247923.1| - 4.5e-06 25.7 0.1 7e-06 25.0 0.0 1.2 1 1 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_4 PF02390.12 gi|15669118|ref|NP_247923.1| - 2.3e-05 23.5 0.3 0.00018 20.6 0.1 1.9 2 0 0 2 2 2 1 Putative methyltransferase N6_Mtase PF02384.11 gi|15669118|ref|NP_247923.1| - 2.6e-05 23.4 0.0 3.2e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase UPF0020 PF01170.13 gi|15669118|ref|NP_247923.1| - 3.5e-05 23.4 0.0 5.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_16 PF10294.4 gi|15669118|ref|NP_247923.1| - 3.8e-05 23.1 0.1 5.1e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 Putative methyltransferase TRM PF02005.11 gi|15669118|ref|NP_247923.1| - 8.9e-05 21.5 0.0 0.0005 19.1 0.0 1.8 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.5 gi|15669118|ref|NP_247923.1| - 0.0001 21.8 0.0 0.00017 21.1 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MethyltransfD12 PF02086.10 gi|15669118|ref|NP_247923.1| - 0.00024 20.6 0.4 0.24 10.7 0.0 2.1 1 1 1 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_3 PF01596.12 gi|15669118|ref|NP_247923.1| - 0.0017 17.4 0.0 0.0031 16.5 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase ADH_zinc_N PF00107.21 gi|15669118|ref|NP_247923.1| - 0.0034 16.9 0.0 0.0054 16.2 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase RrnaAD PF00398.15 gi|15669118|ref|NP_247923.1| - 0.0091 15.0 0.0 0.0091 15.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|15669118|ref|NP_247923.1| - 0.013 16.3 0.0 0.019 15.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.6 gi|15669118|ref|NP_247923.1| - 0.017 13.8 0.0 0.028 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) tRNA_U5-meth_tr PF05958.6 gi|15669118|ref|NP_247923.1| - 0.021 13.5 0.3 0.029 13.0 0.2 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DUF2431 PF10354.4 gi|15669118|ref|NP_247923.1| - 0.024 14.6 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2431) FtsJ PF01728.14 gi|15669118|ref|NP_247923.1| - 0.038 13.9 0.0 0.049 13.6 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase PCMT PF01135.14 gi|15669118|ref|NP_247923.1| - 0.043 13.3 0.0 0.063 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.13 gi|15669118|ref|NP_247923.1| - 0.05 12.7 0.2 0.082 12.0 0.1 1.5 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Eco57I PF07669.6 gi|15669118|ref|NP_247923.1| - 0.069 13.5 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Eco57I restriction-modification methylase DOT1 PF08123.8 gi|15669118|ref|NP_247923.1| - 0.14 11.4 0.2 0.54 9.5 0.1 1.7 1 1 1 2 2 2 0 Histone methylation protein DOT1 CMAS PF02353.15 gi|15669118|ref|NP_247923.1| - 0.17 10.9 0.0 0.55 9.2 0.0 1.8 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Lyase_1 PF00206.15 gi|15669119|ref|NP_247924.1| - 7.7e-63 212.5 0.7 1.2e-62 211.8 0.5 1.3 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|15669119|ref|NP_247924.1| - 5.8e-32 109.5 5.7 8.6e-32 108.9 0.2 3.3 4 0 0 4 4 4 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.6 gi|15669119|ref|NP_247924.1| - 6.1e-06 26.0 0.9 6.1e-06 26.0 0.6 2.2 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminal ASL_C2 PF14698.1 gi|15669119|ref|NP_247924.1| - 0.0021 18.1 0.2 0.031 14.3 0.0 2.7 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal FumaraseC_C PF10415.4 gi|15669119|ref|NP_247924.1| - 0.0045 17.0 1.8 0.01 15.8 0.1 2.5 2 0 0 2 2 2 1 Fumarase C C-terminus AMP_N PF05195.11 gi|15669119|ref|NP_247924.1| - 0.061 12.7 0.0 0.17 11.2 0.0 1.7 1 0 0 1 1 1 0 Aminopeptidase P, N-terminal domain CbiC PF02570.10 gi|15669120|ref|NP_247925.1| - 2.6e-69 232.6 1.5 2.9e-69 232.4 1.1 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase ThiI PF02568.9 gi|15669121|ref|NP_247926.1| - 6.4e-85 283.5 0.9 6.4e-85 283.5 0.7 1.9 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|15669121|ref|NP_247926.1| - 4.8e-33 114.0 7.1 4.8e-33 114.0 4.9 2.5 2 0 0 2 2 2 1 THUMP domain QueC PF06508.8 gi|15669121|ref|NP_247926.1| - 5.4e-06 25.8 0.2 7.5e-05 22.1 0.1 2.6 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15669121|ref|NP_247926.1| - 0.00052 18.6 1.6 0.0018 16.8 0.2 2.5 2 1 1 3 3 3 1 tRNA methyl transferase Nitro_FeMo-Co PF02579.12 gi|15669121|ref|NP_247926.1| - 0.011 15.7 0.1 0.44 10.6 0.0 2.4 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor tRNA_NucTran2_2 PF13735.1 gi|15669121|ref|NP_247926.1| - 0.041 13.6 0.1 0.096 12.5 0.1 1.7 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative DUF956 PF06115.6 gi|15669121|ref|NP_247926.1| - 0.15 11.6 1.8 23 4.6 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF956) CBFD_NFYB_HMF PF00808.18 gi|15669122|ref|NP_247927.1| - 3.7e-21 74.9 3.2 4e-21 74.8 2.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|15669122|ref|NP_247927.1| - 1.1e-16 60.6 1.3 1.3e-16 60.4 0.9 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.12 gi|15669122|ref|NP_247927.1| - 8.2e-08 32.0 0.8 8.8e-08 31.9 0.5 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.1 gi|15669122|ref|NP_247927.1| - 6.3e-07 29.4 0.2 7e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S TFIID_20kDa PF03847.8 gi|15669122|ref|NP_247927.1| - 1.5e-05 25.1 0.3 1.8e-05 24.9 0.2 1.2 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.8 gi|15669122|ref|NP_247927.1| - 1.5e-05 24.6 0.1 1.8e-05 24.3 0.1 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID-18kDa PF02269.11 gi|15669122|ref|NP_247927.1| - 0.00055 19.6 0.1 0.00061 19.5 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit TFIID-31kDa PF02291.10 gi|15669122|ref|NP_247927.1| - 0.00076 19.2 0.1 0.00083 19.1 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DUF1931 PF09123.6 gi|15669122|ref|NP_247927.1| - 0.0071 16.2 1.2 0.008 16.1 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) DUF22 PF01629.11 gi|15669122|ref|NP_247927.1| - 0.049 13.1 1.1 0.051 13.0 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF22 Methyltransf_5 PF01795.14 gi|15669122|ref|NP_247927.1| - 0.061 12.5 1.0 0.057 12.6 0.7 1.0 1 0 0 1 1 1 0 MraW methylase family DUF2540 PF10802.3 gi|15669122|ref|NP_247927.1| - 0.11 12.1 0.8 0.14 11.8 0.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2540) CENP-T PF15511.1 gi|15669122|ref|NP_247927.1| - 0.13 11.4 0.4 0.17 11.0 0.1 1.3 2 0 0 2 2 2 0 Centromere kinetochore component CENP-T DUF92 PF01940.11 gi|15669123|ref|NP_247928.1| - 6.3e-65 218.4 11.4 7.6e-65 218.2 7.9 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF92 MIP PF00230.15 gi|15669123|ref|NP_247928.1| - 0.99 8.8 6.6 0.087 12.2 0.7 2.1 3 0 0 3 3 3 0 Major intrinsic protein DUF2881 PF11087.3 gi|15669123|ref|NP_247928.1| - 6.6 6.3 12.4 2.3 7.7 0.3 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF2881) Fer4 PF00037.22 gi|15669124|ref|NP_247929.1| - 3.2e-33 112.0 59.0 3.8e-09 35.7 2.7 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669124|ref|NP_247929.1| - 2.2e-22 77.8 57.4 4.2e-05 23.2 3.6 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669124|ref|NP_247929.1| - 4.6e-21 74.9 44.4 2.3e-08 34.2 8.8 4.5 2 2 2 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15669124|ref|NP_247929.1| - 7.4e-20 70.4 70.5 3.5e-07 29.9 8.0 4.5 2 2 2 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669124|ref|NP_247929.1| - 2.1e-18 65.0 55.2 2.8e-05 23.7 2.4 6.2 6 0 0 6 6 6 6 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15669124|ref|NP_247929.1| - 9e-15 54.6 51.7 5.6e-06 26.5 0.9 5.0 1 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669124|ref|NP_247929.1| - 3.5e-14 52.3 51.9 5.7e-05 22.9 2.1 4.4 2 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15669124|ref|NP_247929.1| - 2.9e-12 45.8 57.3 7e-05 22.8 1.4 6.2 6 0 0 6 6 6 5 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15669124|ref|NP_247929.1| - 2e-11 44.4 47.8 0.00017 22.2 0.7 5.9 3 2 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15669124|ref|NP_247929.1| - 5.4e-11 42.3 47.3 0.0027 17.7 9.2 5.1 2 2 2 4 4 4 4 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15669124|ref|NP_247929.1| - 6.2e-09 36.0 47.9 0.0031 17.8 0.1 6.1 2 1 4 6 6 6 4 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15669124|ref|NP_247929.1| - 2e-07 31.0 68.0 0.00013 22.2 4.3 6.2 6 0 0 6 6 6 5 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15669124|ref|NP_247929.1| - 1.2e-06 28.9 52.1 0.06 13.9 1.2 6.4 4 2 2 6 6 6 4 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15669124|ref|NP_247929.1| - 0.0001 22.6 49.9 0.00012 22.4 0.1 5.8 4 2 1 5 5 4 3 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15669124|ref|NP_247929.1| - 0.00027 20.7 31.8 0.00094 19.0 2.5 3.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15669124|ref|NP_247929.1| - 0.00047 20.4 54.8 0.036 14.4 1.2 6.3 5 1 1 6 6 6 3 4Fe-4S single cluster domain DUF434 PF04256.7 gi|15669125|ref|NP_247930.1| - 7.8e-25 86.0 0.6 1.4e-24 85.1 0.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF434) NMT1 PF09084.6 gi|15669125|ref|NP_247930.1| - 0.069 12.7 2.3 1.4 8.4 1.6 2.2 1 1 0 1 1 1 0 NMT1/THI5 like DUF2072 PF09845.4 gi|15669125|ref|NP_247930.1| - 0.092 12.6 2.2 0.13 12.1 0.3 1.9 2 0 0 2 2 2 0 Zn-ribbon containing protein (DUF2072) DUF3740 PF12548.3 gi|15669125|ref|NP_247930.1| - 0.6 10.3 7.2 4 7.7 2.7 2.8 2 1 1 3 3 3 0 Sulfatase protein Metallophos_2 PF12850.2 gi|15669126|ref|NP_247931.1| - 2e-28 99.1 0.7 2.3e-28 98.9 0.5 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15669126|ref|NP_247931.1| - 4.5e-08 32.7 6.8 6.8e-07 28.8 4.7 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|15669126|ref|NP_247931.1| - 0.0075 15.4 0.2 0.23 10.6 0.0 2.3 1 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily GARS_A PF01071.14 gi|15669127|ref|NP_247932.1| - 1.8e-65 220.1 1.4 1.8e-65 220.1 1.0 1.8 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|15669127|ref|NP_247932.1| - 7.1e-30 103.4 1.5 3.4e-29 101.2 0.4 2.3 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|15669127|ref|NP_247932.1| - 2.6e-23 81.9 1.2 6.1e-23 80.8 0.3 2.0 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|15669127|ref|NP_247932.1| - 1.2e-16 61.0 0.0 2.7e-16 59.8 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|15669127|ref|NP_247932.1| - 2.1e-06 27.6 0.0 7.8e-06 25.8 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|15669127|ref|NP_247932.1| - 0.00064 18.5 0.0 0.0061 15.3 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 gi|15669127|ref|NP_247932.1| - 0.043 13.1 0.2 0.14 11.4 0.1 1.9 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain RTP PF02334.11 gi|15669127|ref|NP_247932.1| - 0.69 9.8 7.9 0.17 11.8 0.4 2.8 3 0 0 3 3 3 0 Replication terminator protein UPF0014 PF03649.8 gi|15669128|ref|NP_247933.1| - 2.2e-119 397.1 32.5 2.5e-119 397.0 22.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) CxxCxxCC PF03692.10 gi|15669129|ref|NP_247934.1| - 4.4e-12 46.3 7.9 4.4e-12 46.3 5.5 1.8 2 0 0 2 2 2 1 Putative zinc- or iron-chelating domain zf-C2H2_7 PF15269.1 gi|15669129|ref|NP_247934.1| - 0.99 9.3 5.7 18 5.3 1.2 2.6 2 0 0 2 2 2 0 Zinc-finger TPR_11 PF13414.1 gi|15669130|ref|NP_247935.1| - 6.4e-46 153.8 37.0 1.8e-12 46.7 1.6 5.3 3 2 3 6 6 6 6 TPR repeat TPR_1 PF00515.23 gi|15669130|ref|NP_247935.1| - 1.3e-41 138.5 37.4 7.9e-10 37.9 1.0 9.1 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15669130|ref|NP_247935.1| - 2.7e-37 123.6 27.4 6.3e-09 35.0 0.7 9.2 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15669130|ref|NP_247935.1| - 3.5e-35 117.1 36.9 7.6e-07 28.4 0.4 8.8 9 0 0 9 9 9 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15669130|ref|NP_247935.1| - 3.9e-29 100.4 17.7 1.5e-08 34.4 0.2 5.9 3 2 2 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15669130|ref|NP_247935.1| - 2.8e-26 89.6 0.6 0.00057 20.2 0.0 8.9 2 2 7 9 9 9 6 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15669130|ref|NP_247935.1| - 2.3e-24 83.2 12.2 1.9e-06 27.2 0.2 7.9 7 1 1 8 8 8 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15669130|ref|NP_247935.1| - 2.3e-24 83.5 15.8 0.0034 17.4 0.0 7.8 7 1 1 8 8 7 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15669130|ref|NP_247935.1| - 3.6e-24 84.8 7.1 6.5e-07 29.5 0.3 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15669130|ref|NP_247935.1| - 3.8e-24 84.7 3.2 7.5e-07 29.6 0.0 5.4 2 2 4 7 7 7 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|15669130|ref|NP_247935.1| - 6.5e-23 80.3 4.2 4e-07 29.7 0.0 6.5 3 3 4 7 7 7 4 Tetratricopeptide repeat Apc3 PF12895.2 gi|15669130|ref|NP_247935.1| - 1.5e-21 76.3 18.0 2.8e-09 36.9 1.5 3.3 3 0 0 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 gi|15669130|ref|NP_247935.1| - 6.7e-15 54.8 3.2 1.9e-05 23.6 0.2 4.3 1 1 3 4 4 4 4 NMDA receptor-regulated protein 1 TPR_6 PF13174.1 gi|15669130|ref|NP_247935.1| - 1e-12 47.5 13.7 0.15 12.5 0.1 7.0 7 0 0 7 7 7 4 Tetratricopeptide repeat DUF3856 PF12968.2 gi|15669130|ref|NP_247935.1| - 5.6e-09 35.9 0.6 0.2 11.5 0.0 4.3 3 1 0 3 3 3 3 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.1 gi|15669130|ref|NP_247935.1| - 9.5e-09 35.0 11.6 0.006 16.4 0.1 6.7 6 1 1 7 7 7 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|15669130|ref|NP_247935.1| - 7.2e-08 32.1 13.2 0.014 15.2 0.0 6.4 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_15 PF13429.1 gi|15669130|ref|NP_247935.1| - 8.3e-08 31.6 1.2 0.28 10.2 0.1 4.4 2 2 1 4 4 4 2 Tetratricopeptide repeat MIT PF04212.13 gi|15669130|ref|NP_247935.1| - 1e-07 31.6 14.4 0.072 12.9 0.3 5.5 4 1 1 5 5 5 3 MIT (microtubule interacting and transport) domain RPN7 PF10602.4 gi|15669130|ref|NP_247935.1| - 2.6e-07 30.2 10.6 0.017 14.5 0.2 5.0 2 2 2 5 5 5 2 26S proteasome subunit RPN7 TPR_5 PF12688.2 gi|15669130|ref|NP_247935.1| - 9.9e-06 25.5 0.0 0.009 16.0 0.0 3.4 3 1 1 4 4 4 1 Tetratrico peptide repeat TPR_4 PF07721.9 gi|15669130|ref|NP_247935.1| - 1e-05 25.4 0.0 2.2 8.9 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 gi|15669130|ref|NP_247935.1| - 4.7e-05 23.6 0.1 0.35 11.0 0.0 3.2 3 0 0 3 3 3 2 Alkyl sulfatase dimerisation DUF2225 PF09986.4 gi|15669130|ref|NP_247935.1| - 0.00042 19.8 7.7 0.05 13.0 0.4 3.6 1 1 1 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2225) Nuc_rec_co-act PF08815.5 gi|15669130|ref|NP_247935.1| - 0.0016 17.8 0.0 0.005 16.3 0.0 1.8 1 0 0 1 1 1 1 Nuclear receptor coactivator PPR PF01535.15 gi|15669130|ref|NP_247935.1| - 0.0018 18.0 12.3 20 5.4 0.0 7.1 8 0 0 8 8 7 0 PPR repeat Sel1 PF08238.7 gi|15669130|ref|NP_247935.1| - 0.0025 18.4 11.5 0.085 13.5 0.5 5.1 6 0 0 6 6 4 1 Sel1 repeat FAT PF02259.18 gi|15669130|ref|NP_247935.1| - 0.011 14.7 1.6 0.18 10.7 0.8 2.5 2 2 1 3 3 3 0 FAT domain BTAD PF03704.12 gi|15669130|ref|NP_247935.1| - 0.026 14.8 0.5 0.95 9.7 0.0 2.6 3 0 0 3 3 2 0 Bacterial transcriptional activator domain Ubiq-assoc PF09145.5 gi|15669130|ref|NP_247935.1| - 0.035 13.9 3.1 35 4.3 0.0 4.8 3 1 1 4 4 4 0 Ubiquitin-associated TPR_21 PF09976.4 gi|15669130|ref|NP_247935.1| - 0.038 13.9 0.3 22 4.9 0.1 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1033 PF06279.6 gi|15669130|ref|NP_247935.1| - 0.068 12.9 0.5 16 5.3 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1033) SHNi-TPR PF10516.4 gi|15669130|ref|NP_247935.1| - 0.22 10.8 2.5 27 4.1 0.0 3.8 4 0 0 4 4 4 0 SHNi-TPR TPR_11 PF13414.1 gi|15669131|ref|NP_247936.1| - 1.4e-46 155.9 26.9 4.2e-13 48.7 1.8 5.9 2 2 3 6 6 6 6 TPR repeat TPR_1 PF00515.23 gi|15669131|ref|NP_247936.1| - 5.9e-44 145.9 28.3 3.7e-10 38.9 0.3 8.8 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15669131|ref|NP_247936.1| - 2.3e-41 136.4 25.6 5.2e-08 32.1 0.1 8.8 8 1 1 9 9 9 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15669131|ref|NP_247936.1| - 4.4e-41 135.5 26.6 1.3e-08 34.1 0.3 9.1 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15669131|ref|NP_247936.1| - 2.9e-32 110.6 7.4 1.8e-10 41.1 0.2 6.1 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15669131|ref|NP_247936.1| - 1.3e-29 101.9 19.8 4.1e-08 33.0 0.1 6.3 2 2 3 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15669131|ref|NP_247936.1| - 7.9e-29 97.4 7.7 9.1e-05 22.3 0.0 7.4 8 0 0 8 8 7 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15669131|ref|NP_247936.1| - 1.4e-28 96.3 5.6 0.00012 21.5 0.1 7.5 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15669131|ref|NP_247936.1| - 3.7e-28 95.4 4.0 0.00013 22.3 0.0 9.0 2 2 7 9 9 9 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15669131|ref|NP_247936.1| - 3.8e-23 81.5 5.9 3.9e-06 27.1 0.1 5.1 3 1 3 6 6 6 6 Tetratricopeptide repeat TPR_6 PF13174.1 gi|15669131|ref|NP_247936.1| - 2.3e-20 71.5 9.2 0.0029 17.9 0.1 7.4 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|15669131|ref|NP_247936.1| - 5e-20 71.1 8.2 4.3e-07 29.6 0.1 4.9 3 1 3 6 6 5 4 Tetratricopeptide repeat NARP1 PF12569.3 gi|15669131|ref|NP_247936.1| - 1.8e-17 63.3 0.2 7.4e-08 31.5 0.2 4.5 1 1 4 5 5 5 4 NMDA receptor-regulated protein 1 Apc3 PF12895.2 gi|15669131|ref|NP_247936.1| - 3.2e-17 62.4 31.3 2.4e-05 24.4 0.8 4.3 1 1 4 5 5 5 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|15669131|ref|NP_247936.1| - 1.2e-10 40.8 0.1 0.059 12.4 0.0 4.5 1 1 1 4 4 4 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|15669131|ref|NP_247936.1| - 9e-09 35.0 12.8 0.0011 18.7 0.2 5.9 6 1 1 7 7 7 2 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.13 gi|15669131|ref|NP_247936.1| - 9.1e-09 35.0 13.4 0.0013 18.5 0.7 6.4 4 3 2 6 6 6 2 MIT (microtubule interacting and transport) domain RPN7 PF10602.4 gi|15669131|ref|NP_247936.1| - 1.3e-08 34.3 10.3 0.016 14.6 0.2 5.8 4 2 1 6 6 6 3 26S proteasome subunit RPN7 PPR PF01535.15 gi|15669131|ref|NP_247936.1| - 9.2e-08 31.5 13.0 2.3 8.3 0.1 7.1 7 0 0 7 7 6 3 PPR repeat DUF3856 PF12968.2 gi|15669131|ref|NP_247936.1| - 1.4e-07 31.4 5.4 0.29 10.9 0.0 6.0 1 1 5 6 6 6 1 Domain of Unknown Function (DUF3856) TPR_10 PF13374.1 gi|15669131|ref|NP_247936.1| - 5e-07 29.4 7.4 1.4 8.9 0.2 7.1 8 0 0 8 8 7 1 Tetratricopeptide repeat DUF2225 PF09986.4 gi|15669131|ref|NP_247936.1| - 4.4e-06 26.3 2.5 0.073 12.5 0.1 4.0 1 1 2 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2225) BTAD PF03704.12 gi|15669131|ref|NP_247936.1| - 6.4e-06 26.5 0.1 0.33 11.2 0.0 3.4 3 0 0 3 3 3 1 Bacterial transcriptional activator domain FAT PF02259.18 gi|15669131|ref|NP_247936.1| - 8.1e-06 25.0 0.1 2.8e-05 23.2 0.0 1.8 1 1 0 2 2 2 1 FAT domain DUF3808 PF10300.4 gi|15669131|ref|NP_247936.1| - 1.4e-05 23.8 0.4 2.1 6.8 0.0 4.5 1 1 2 5 5 5 2 Protein of unknown function (DUF3808) TPR_4 PF07721.9 gi|15669131|ref|NP_247936.1| - 5.5e-05 23.2 0.0 35 5.2 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_5 PF12688.2 gi|15669131|ref|NP_247936.1| - 5.9e-05 23.0 1.2 1.1 9.2 0.0 5.2 3 1 3 7 7 6 1 Tetratrico peptide repeat ChAPs PF09295.5 gi|15669131|ref|NP_247936.1| - 0.00018 20.3 0.3 0.1 11.3 0.0 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) Coatomer_E PF04733.9 gi|15669131|ref|NP_247936.1| - 0.0027 16.9 0.3 1.1 8.4 0.0 3.1 3 1 1 4 4 4 1 Coatomer epsilon subunit TPR_21 PF09976.4 gi|15669131|ref|NP_247936.1| - 0.0053 16.6 0.6 75 3.2 0.0 4.5 4 1 1 5 5 5 0 Tetratricopeptide repeat SNAP PF14938.1 gi|15669131|ref|NP_247936.1| - 0.0063 15.6 3.3 1 8.4 0.3 4.0 2 2 0 4 4 4 1 Soluble NSF attachment protein, SNAP Sel1 PF08238.7 gi|15669131|ref|NP_247936.1| - 0.016 15.8 10.4 4.6 8.0 0.1 5.4 6 0 0 6 6 5 0 Sel1 repeat Clathrin PF00637.15 gi|15669131|ref|NP_247936.1| - 0.14 11.7 6.4 0.64 9.6 1.6 3.7 1 1 2 3 3 3 0 Region in Clathrin and VPS Helicase_C_2 PF13307.1 gi|15669132|ref|NP_247937.1| - 2.8e-29 102.2 0.0 7e-29 100.9 0.0 1.7 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD PF00270.24 gi|15669132|ref|NP_247937.1| - 1e-10 41.3 0.0 9.8e-07 28.4 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.10 gi|15669132|ref|NP_247937.1| - 3.3e-09 36.8 0.6 1.5e-07 31.4 0.4 2.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DNA_pol3_delta PF06144.8 gi|15669132|ref|NP_247937.1| - 0.0026 17.3 1.2 0.0026 17.3 0.9 2.1 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Helicase_C PF00271.26 gi|15669132|ref|NP_247937.1| - 0.007 16.2 0.1 0.38 10.6 0.1 3.1 2 1 0 2 2 2 1 Helicase conserved C-terminal domain AAA_22 PF13401.1 gi|15669132|ref|NP_247937.1| - 0.055 13.6 0.0 11 6.1 0.0 2.6 2 0 0 2 2 2 0 AAA domain SNF2_N PF00176.18 gi|15669132|ref|NP_247937.1| - 0.061 12.1 0.1 0.17 10.6 0.1 1.8 1 1 0 1 1 1 0 SNF2 family N-terminal domain AAA_19 PF13245.1 gi|15669132|ref|NP_247937.1| - 0.12 12.1 0.0 0.77 9.5 0.0 2.2 2 0 0 2 2 2 0 Part of AAA domain DEAD_2 PF06733.10 gi|15669132|ref|NP_247937.1| - 0.29 10.5 10.5 1.4 8.3 7.3 2.1 1 1 0 1 1 1 0 DEAD_2 FliS PF02561.9 gi|15669132|ref|NP_247937.1| - 0.7 9.7 6.5 0.072 12.9 1.0 1.9 2 0 0 2 2 2 0 Flagellar protein FliS LEA_2 PF03168.8 gi|15669133|ref|NP_247938.1| - 0.0025 18.1 0.1 0.0076 16.6 0.0 1.9 1 1 1 2 2 2 1 Late embryogenesis abundant protein Gastrin PF00918.12 gi|15669133|ref|NP_247938.1| - 0.02 15.6 0.5 0.034 14.9 0.4 1.3 1 0 0 1 1 1 0 Gastrin/cholecystokinin family Rib PF08428.5 gi|15669133|ref|NP_247938.1| - 0.3 10.8 4.3 1 9.1 0.3 2.7 2 0 0 2 2 2 0 Rib/alpha-like repeat HTH_34 PF13601.1 gi|15669134|ref|NP_247939.1| - 2.7e-08 33.7 0.2 3.9e-08 33.2 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.9 gi|15669134|ref|NP_247939.1| - 7.6e-08 32.0 0.4 1.7e-07 30.9 0.3 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_20 PF12840.2 gi|15669134|ref|NP_247939.1| - 4.4e-07 29.5 0.0 6.1e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|15669134|ref|NP_247939.1| - 5.8e-06 25.9 0.2 9.4e-06 25.2 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|15669134|ref|NP_247939.1| - 2.6e-05 23.6 1.2 3.6e-05 23.1 0.4 1.5 1 1 1 2 2 2 1 TFIIE alpha subunit MarR PF01047.17 gi|15669134|ref|NP_247939.1| - 4.6e-05 23.0 0.2 7.3e-05 22.3 0.2 1.3 1 0 0 1 1 1 1 MarR family HxlR PF01638.12 gi|15669134|ref|NP_247939.1| - 9.3e-05 21.9 0.5 0.00013 21.5 0.3 1.4 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|15669134|ref|NP_247939.1| - 0.00032 20.2 0.0 0.00045 19.7 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_45 PF14947.1 gi|15669134|ref|NP_247939.1| - 0.00062 19.5 0.5 0.00062 19.5 0.3 1.8 1 1 1 2 2 2 1 Winged helix-turn-helix Mrr_N PF14338.1 gi|15669134|ref|NP_247939.1| - 0.0011 18.9 0.3 1.2 9.3 0.0 2.6 1 1 2 3 3 3 2 Mrr N-terminal domain Replic_Relax PF13814.1 gi|15669134|ref|NP_247939.1| - 0.0028 17.5 0.1 0.0032 17.3 0.0 1.1 1 0 0 1 1 1 1 Replication-relaxation MarR_2 PF12802.2 gi|15669134|ref|NP_247939.1| - 0.003 17.1 0.0 0.0058 16.2 0.0 1.5 1 1 1 2 2 2 1 MarR family HTH_24 PF13412.1 gi|15669134|ref|NP_247939.1| - 0.0064 15.8 0.3 0.02 14.2 0.2 1.9 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding FeoC PF09012.5 gi|15669134|ref|NP_247939.1| - 0.0088 15.7 0.1 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_5 PF01022.15 gi|15669134|ref|NP_247939.1| - 0.0088 15.6 0.5 0.015 14.9 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|15669134|ref|NP_247939.1| - 0.013 15.8 0.1 0.024 14.9 0.0 1.5 2 0 0 2 2 1 0 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|15669134|ref|NP_247939.1| - 0.017 15.0 1.8 0.24 11.3 1.3 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Penicillinase_R PF03965.11 gi|15669134|ref|NP_247939.1| - 0.017 15.1 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Penicillinase repressor DUF1495 PF07381.6 gi|15669134|ref|NP_247939.1| - 0.044 13.4 0.1 0.18 11.4 0.1 2.0 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) Fe_dep_repress PF01325.14 gi|15669134|ref|NP_247939.1| - 0.047 13.6 0.1 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF1803 PF08820.5 gi|15669134|ref|NP_247939.1| - 0.082 12.6 0.2 0.14 11.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) z-alpha PF02295.12 gi|15669134|ref|NP_247939.1| - 0.085 12.6 0.3 0.17 11.6 0.2 1.5 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain Rrf2 PF02082.15 gi|15669134|ref|NP_247939.1| - 0.09 12.9 0.9 0.29 11.2 0.1 2.1 2 1 0 2 2 2 0 Transcriptional regulator DASH_Dad1 PF08649.5 gi|15669134|ref|NP_247939.1| - 0.096 12.4 1.8 0.26 10.9 0.0 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad1 DUF1080 PF06439.6 gi|15669135|ref|NP_247940.1| - 1.1e-07 31.9 0.4 1.3e-07 31.6 0.3 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1080) Toxin_R_bind_N PF07953.7 gi|15669135|ref|NP_247940.1| - 0.066 12.7 0.7 0.13 11.7 0.5 1.4 1 0 0 1 1 1 0 Clostridium neurotoxin, N-terminal receptor binding TRM PF02005.11 gi|15669136|ref|NP_247941.1| - 2.5e-136 454.5 0.6 2.9e-136 454.3 0.4 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.1 gi|15669136|ref|NP_247941.1| - 2.1e-05 24.1 0.6 4.3e-05 23.1 0.0 1.8 2 1 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.11 gi|15669136|ref|NP_247941.1| - 3.7e-05 23.3 0.0 6.6e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Met-10+ like-protein HTH_24 PF13412.1 gi|15669136|ref|NP_247941.1| - 0.00043 19.6 0.0 0.046 13.1 0.0 3.0 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Arena_nucleocap PF00843.12 gi|15669136|ref|NP_247941.1| - 0.022 12.6 0.0 0.029 12.2 0.0 1.1 1 0 0 1 1 1 0 Arenavirus nucleocapsid protein MTS PF05175.9 gi|15669136|ref|NP_247941.1| - 0.025 13.9 0.0 0.072 12.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase small domain tRNA-synt_1 PF00133.17 gi|15669137|ref|NP_247942.1| - 3.9e-200 665.8 15.1 3.9e-200 665.8 10.5 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|15669137|ref|NP_247942.1| - 4.7e-30 104.5 3.7 6.2e-11 41.5 0.0 4.2 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|15669137|ref|NP_247942.1| - 2.1e-27 95.7 1.3 8.9e-27 93.7 0.9 2.2 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 gi|15669137|ref|NP_247942.1| - 2.6e-08 33.4 3.7 1.6e-07 30.8 0.3 2.7 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|15669137|ref|NP_247942.1| - 3.8e-08 32.8 0.1 2.2e-06 27.0 0.0 2.7 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|15669137|ref|NP_247942.1| - 7.1e-06 24.9 0.0 0.00044 19.0 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class I (K) DUF2922 PF11148.3 gi|15669137|ref|NP_247942.1| - 0.031 13.9 0.0 0.12 12.0 0.0 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2922) DUF3510 PF12022.3 gi|15669138|ref|NP_247943.1| - 0.029 14.4 2.5 0.056 13.5 0.3 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF3510) DUF2312 PF10073.4 gi|15669138|ref|NP_247943.1| - 0.19 11.1 0.2 0.19 11.1 0.1 2.8 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) BLOC1_2 PF10046.4 gi|15669138|ref|NP_247943.1| - 0.63 10.2 8.8 1.7 8.8 1.8 2.3 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF356 PF04009.7 gi|15669139|ref|NP_247944.1| - 1.3e-43 147.3 1.0 1.6e-43 147.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF356) DUF1894 PF08979.6 gi|15669139|ref|NP_247944.1| - 0.019 14.9 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1894) UPF0278 PF08745.6 gi|15669140|ref|NP_247945.1| - 7.2e-96 319.3 0.1 8.2e-96 319.1 0.1 1.0 1 0 0 1 1 1 1 UPF0278 family SRI PF08236.6 gi|15669140|ref|NP_247945.1| - 0.021 14.7 0.3 6.7 6.7 0.0 2.4 1 1 1 2 2 2 0 SRI (Set2 Rpb1 interacting) domain HIGH_NTase1 PF05636.6 gi|15669141|ref|NP_247946.1| - 1.4e-17 63.8 0.3 1.3e-13 50.7 0.0 2.4 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.6 gi|15669141|ref|NP_247946.1| - 0.0023 17.4 0.0 0.097 12.1 0.0 2.4 2 0 0 2 2 2 1 Citrate lyase ligase C-terminal domain ATP-sulfurylase PF01747.12 gi|15669141|ref|NP_247946.1| - 0.0053 16.0 0.0 0.066 12.5 0.0 2.2 2 0 0 2 2 2 1 ATP-sulfurylase DUF3217 PF11506.3 gi|15669141|ref|NP_247946.1| - 0.039 13.6 2.6 0.085 12.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3217) CTP_transf_2 PF01467.21 gi|15669141|ref|NP_247946.1| - 0.12 12.4 0.0 2.2 8.3 0.0 2.4 2 0 0 2 2 2 0 Cytidylyltransferase DUF554 PF04474.7 gi|15669141|ref|NP_247946.1| - 0.12 11.5 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF554) DUF655 PF04919.7 gi|15669141|ref|NP_247946.1| - 0.21 11.2 4.8 2.9 7.5 0.8 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF655) Prefoldin PF02996.12 gi|15669142|ref|NP_247947.1| - 4.6e-24 84.3 7.6 7.2e-24 83.7 5.2 1.3 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|15669142|ref|NP_247947.1| - 2.9e-06 26.9 13.2 0.0039 16.9 0.4 2.2 1 1 1 2 2 2 2 Prefoldin subunit DUF848 PF05852.6 gi|15669142|ref|NP_247947.1| - 0.0036 17.1 5.2 0.0036 17.1 3.6 2.1 2 0 0 2 2 2 1 Gammaherpesvirus protein of unknown function (DUF848) BRO1 PF03097.13 gi|15669142|ref|NP_247947.1| - 0.0044 15.8 2.3 0.0056 15.4 1.6 1.1 1 0 0 1 1 1 1 BRO1-like domain Hormone_1 PF00103.15 gi|15669142|ref|NP_247947.1| - 0.0071 15.7 4.8 0.061 12.6 0.4 2.0 2 0 0 2 2 2 1 Somatotropin hormone family Baculo_PEP_C PF04513.7 gi|15669142|ref|NP_247947.1| - 0.0082 15.9 5.0 0.6 9.9 0.2 2.1 2 0 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus IncA PF04156.9 gi|15669142|ref|NP_247947.1| - 0.014 14.9 11.9 0.26 10.8 3.1 2.0 2 0 0 2 2 2 0 IncA protein HsbA PF12296.3 gi|15669142|ref|NP_247947.1| - 0.071 12.9 4.2 0.052 13.4 0.7 2.0 2 0 0 2 2 2 0 Hydrophobic surface binding protein A FlxA PF14282.1 gi|15669142|ref|NP_247947.1| - 0.079 12.9 21.0 0.071 13.0 6.2 2.3 2 1 0 2 2 2 0 FlxA-like protein Toxin_YhaV PF11663.3 gi|15669142|ref|NP_247947.1| - 0.087 12.5 3.8 0.15 11.8 1.4 1.9 2 0 0 2 2 2 0 Toxin with endonuclease activity YhaV Filament PF00038.16 gi|15669142|ref|NP_247947.1| - 0.12 11.8 14.8 0.081 12.3 2.8 2.0 2 0 0 2 2 2 0 Intermediate filament protein BUD22 PF09073.5 gi|15669142|ref|NP_247947.1| - 0.13 11.3 8.2 0.15 11.1 5.7 1.1 1 0 0 1 1 1 0 BUD22 Syntaxin-6_N PF09177.6 gi|15669142|ref|NP_247947.1| - 0.27 11.6 8.2 2.6 8.4 1.2 2.5 2 1 0 2 2 2 0 Syntaxin 6, N-terminal AATF-Che1 PF13339.1 gi|15669142|ref|NP_247947.1| - 0.4 10.8 7.5 0.071 13.2 2.0 1.9 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor Syntaxin_2 PF14523.1 gi|15669142|ref|NP_247947.1| - 0.43 10.6 9.2 1.3 9.1 2.5 2.2 2 0 0 2 2 2 0 Syntaxin-like protein TPR_MLP1_2 PF07926.7 gi|15669142|ref|NP_247947.1| - 0.47 10.2 15.2 0.37 10.5 4.9 2.3 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein GAS PF13851.1 gi|15669142|ref|NP_247947.1| - 0.48 9.5 16.5 1.2 8.3 0.7 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.6 gi|15669142|ref|NP_247947.1| - 0.49 10.3 9.5 4.6 7.2 0.8 3.1 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) BLOC1_2 PF10046.4 gi|15669142|ref|NP_247947.1| - 0.59 10.3 13.5 0.37 10.9 1.8 2.4 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tho2 PF11262.3 gi|15669142|ref|NP_247947.1| - 0.91 8.5 12.2 0.37 9.8 3.9 2.0 2 0 0 2 2 2 0 Transcription factor/nuclear export subunit protein 2 CDC37_N PF03234.9 gi|15669142|ref|NP_247947.1| - 1 9.6 10.0 1.2 9.4 6.9 1.2 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding UTP15_C PF09384.5 gi|15669142|ref|NP_247947.1| - 1 9.0 6.2 0.48 10.1 0.8 2.4 2 1 1 3 3 3 0 UTP15 C terminal DUF948 PF06103.6 gi|15669142|ref|NP_247947.1| - 1.2 8.9 8.4 0.69 9.8 1.4 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.6 gi|15669142|ref|NP_247947.1| - 1.3 7.6 15.7 0.96 8.0 2.7 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Spc24 PF08286.6 gi|15669142|ref|NP_247947.1| - 1.6 8.4 10.1 4.3 7.0 0.1 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 bZIP_2 PF07716.10 gi|15669142|ref|NP_247947.1| - 2.1 8.2 10.6 0.79 9.5 0.6 2.8 2 1 0 2 2 2 0 Basic region leucine zipper ZYG-11_interact PF05884.7 gi|15669142|ref|NP_247947.1| - 2.7 6.9 5.5 0.4 9.7 0.3 1.8 2 0 0 2 2 2 0 Interactor of ZYG-11 Sas10_Utp3 PF04000.10 gi|15669142|ref|NP_247947.1| - 2.9 8.1 6.0 82 3.5 2.7 3.0 2 1 0 2 2 2 0 Sas10/Utp3/C1D family FliD_N PF02465.13 gi|15669142|ref|NP_247947.1| - 3.7 7.9 9.9 0.42 10.9 0.3 2.4 1 1 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF1840 PF08895.6 gi|15669142|ref|NP_247947.1| - 3.8 7.5 8.1 0.77 9.8 2.7 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1840) Prominin PF05478.6 gi|15669142|ref|NP_247947.1| - 4.8 4.5 10.1 0.6 7.5 1.5 2.0 2 0 0 2 2 2 0 Prominin APG6 PF04111.7 gi|15669142|ref|NP_247947.1| - 4.9 6.0 14.5 2.2 7.2 4.3 2.0 2 0 0 2 2 2 0 Autophagy protein Apg6 DUF2203 PF09969.4 gi|15669142|ref|NP_247947.1| - 5.2 7.3 7.1 18 5.6 2.2 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) HSCB_C PF07743.8 gi|15669142|ref|NP_247947.1| - 5.3 7.5 12.1 14 6.2 5.3 2.6 2 2 0 2 2 2 0 HSCB C-terminal oligomerisation domain DUF972 PF06156.8 gi|15669142|ref|NP_247947.1| - 7.9 6.8 13.2 2.3 8.5 3.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF972) MNHE PF01899.11 gi|15669143|ref|NP_247948.1| - 1.2e-15 57.5 0.1 1.2e-15 57.4 0.1 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit S_layer_C PF05124.7 gi|15669144|ref|NP_247949.1| - 2.9e-40 138.2 12.7 2.9e-40 138.2 8.8 3.5 2 2 0 3 3 3 1 S-layer like family, C-terminal region DUF2996 PF11210.3 gi|15669144|ref|NP_247949.1| - 0.13 12.5 0.2 0.52 10.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2996) Aminotran_1_2 PF00155.16 gi|15669145|ref|NP_247950.1| - 3e-62 210.6 0.0 3.5e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.8 gi|15669145|ref|NP_247950.1| - 1.5e-09 36.9 0.2 6.4e-08 31.6 0.1 2.1 2 0 0 2 2 2 1 Allinase Aminotran_5 PF00266.14 gi|15669145|ref|NP_247950.1| - 2.2e-09 36.5 0.2 2.4e-07 29.8 0.1 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|15669145|ref|NP_247950.1| - 2.9e-07 29.1 1.1 4.8e-07 28.3 0.1 1.6 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|15669145|ref|NP_247950.1| - 0.0003 19.9 0.4 0.00046 19.3 0.3 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Semialdhyde_dh PF01118.19 gi|15669145|ref|NP_247950.1| - 0.084 13.1 0.0 3.9 7.8 0.0 2.3 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Aminotran_5 PF00266.14 gi|15669149|ref|NP_247954.1| - 1.1e-42 146.1 0.0 1.3e-42 145.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|15669149|ref|NP_247954.1| - 2e-06 26.3 0.2 3.5e-06 25.5 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|15669149|ref|NP_247954.1| - 1.4e-05 24.1 0.0 2.9e-05 23.2 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|15669149|ref|NP_247954.1| - 0.0011 18.1 0.2 0.005 16.0 0.1 1.9 1 1 0 1 1 1 1 Beta-eliminating lyase FAD_oxidored PF12831.2 gi|15669149|ref|NP_247954.1| - 0.031 13.3 0.0 0.28 10.2 0.0 1.9 2 0 0 2 2 2 0 FAD dependent oxidoreductase DUF2982 PF11201.3 gi|15669149|ref|NP_247954.1| - 0.09 12.1 0.0 0.2 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2982) Transaldolase PF00923.14 gi|15669150|ref|NP_247955.1| - 1.8e-65 220.9 0.9 1.2e-64 218.2 0.6 2.0 1 1 0 1 1 1 1 Transaldolase MCM PF00493.18 gi|15669151|ref|NP_247956.1| - 8.7e-99 330.4 2.4 1.9e-97 326.0 0.1 2.7 2 1 0 2 2 2 1 MCM2/3/5 family Mg_chelatase PF01078.16 gi|15669151|ref|NP_247956.1| - 1.2e-10 40.8 0.0 7.1e-07 28.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|15669151|ref|NP_247956.1| - 2.2e-07 30.6 0.0 5.1e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM_N PF14551.1 gi|15669151|ref|NP_247956.1| - 0.00057 20.3 0.3 0.00057 20.3 0.2 2.9 3 1 0 3 3 3 1 MCM N-terminal domain AAA_16 PF13191.1 gi|15669151|ref|NP_247956.1| - 0.0082 16.1 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|15669151|ref|NP_247956.1| - 0.016 15.3 0.0 0.047 13.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain RPA_C PF08784.6 gi|15669151|ref|NP_247956.1| - 0.032 14.6 0.0 0.076 13.4 0.0 1.6 1 0 0 1 1 1 0 Replication protein A C terminal AAA_3 PF07726.6 gi|15669151|ref|NP_247956.1| - 0.074 12.6 0.0 18 4.9 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.1 gi|15669151|ref|NP_247956.1| - 0.13 12.0 0.3 0.41 10.4 0.2 1.8 1 0 0 1 1 1 0 Part of AAA domain Rpr2 PF04032.11 gi|15669152|ref|NP_247957.1| - 9.9e-24 83.0 0.3 1.5e-23 82.4 0.2 1.3 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain ADK_lid PF05191.9 gi|15669152|ref|NP_247957.1| - 0.0015 18.1 0.5 1.5 8.5 0.3 2.3 2 0 0 2 2 2 2 Adenylate kinase, active site lid A2L_zn_ribbon PF08792.5 gi|15669152|ref|NP_247957.1| - 0.0022 17.4 0.6 0.94 9.0 0.0 2.2 2 0 0 2 2 2 2 A2L zinc ribbon domain FYTT PF07078.6 gi|15669152|ref|NP_247957.1| - 0.016 14.5 1.2 0.017 14.4 0.8 1.1 1 0 0 1 1 1 0 Forty-two-three protein zf-ribbon_3 PF13248.1 gi|15669152|ref|NP_247957.1| - 0.06 12.5 0.3 9.3 5.6 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_3 PF13878.1 gi|15669152|ref|NP_247957.1| - 0.068 12.7 0.2 10 5.7 0.0 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DZR PF12773.2 gi|15669152|ref|NP_247957.1| - 0.093 12.5 0.2 0.18 11.6 0.1 1.5 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.1 gi|15669152|ref|NP_247957.1| - 0.12 12.0 0.3 2.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_4 PF13717.1 gi|15669152|ref|NP_247957.1| - 0.25 11.0 2.5 1.2 8.8 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15669152|ref|NP_247957.1| - 0.35 10.4 2.6 1.5 8.4 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|15669152|ref|NP_247957.1| - 1.9 8.3 4.9 21 5.0 1.0 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Hydantoinase_B PF02538.9 gi|15669153|ref|NP_247958.1| - 1.8e-224 745.8 2.1 2.1e-224 745.6 1.4 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.13 gi|15669154|ref|NP_247959.1| - 1.1e-98 329.8 0.2 6e-97 324.2 0.0 2.5 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|15669154|ref|NP_247959.1| - 2.1e-54 183.7 1.4 7.1e-54 181.9 0.0 2.5 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region MGDG_synth PF06925.6 gi|15669154|ref|NP_247959.1| - 0.0057 16.5 0.1 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Sugar-bind PF04198.8 gi|15669154|ref|NP_247959.1| - 0.11 11.4 0.0 0.32 9.8 0.0 1.7 2 0 0 2 2 2 0 Putative sugar-binding domain MutL PF13941.1 gi|15669154|ref|NP_247959.1| - 0.41 8.9 2.3 5.1 5.2 0.0 2.6 3 0 0 3 3 3 0 MutL protein TP_methylase PF00590.15 gi|15669155|ref|NP_247960.1| - 2.6e-53 180.8 0.1 3e-53 180.6 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|15669155|ref|NP_247960.1| - 0.076 13.1 0.4 0.13 12.3 0.3 1.6 1 1 0 1 1 1 0 Radical SAM superfamily Adeno_52K PF03052.10 gi|15669155|ref|NP_247960.1| - 0.083 12.1 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Radical_SAM PF04055.16 gi|15669156|ref|NP_247961.1| - 2.5e-18 66.7 0.2 8.4e-18 65.0 0.1 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|15669156|ref|NP_247961.1| - 8.1e-06 25.7 0.0 0.00027 20.7 0.0 2.8 3 0 0 3 3 3 1 B12 binding domain Pneumovirus_M2 PF06436.6 gi|15669156|ref|NP_247961.1| - 0.05 12.8 0.5 3.9 6.6 0.1 2.5 2 0 0 2 2 2 0 Pneumovirus matrix protein 2 (M2) DJ-1_PfpI PF01965.19 gi|15669157|ref|NP_247962.1| - 1.3e-36 125.2 0.1 1.8e-36 124.7 0.1 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|15669157|ref|NP_247962.1| - 2.2e-13 49.8 0.0 3.6e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Putative amidotransferase DUF677 PF05055.7 gi|15669157|ref|NP_247962.1| - 0.057 12.0 0.2 0.1 11.2 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF677) Hydrolase PF00702.21 gi|15669158|ref|NP_247963.1| - 2.9e-18 67.0 0.2 5.1e-18 66.2 0.2 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|15669158|ref|NP_247963.1| - 9.9e-14 51.9 0.1 1.3e-13 51.5 0.0 1.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|15669158|ref|NP_247963.1| - 3.5e-05 23.5 1.3 0.028 13.9 0.0 2.9 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|15669158|ref|NP_247963.1| - 0.0011 19.2 0.0 0.013 15.7 0.0 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DNA_photolyase PF00875.13 gi|15669158|ref|NP_247963.1| - 0.11 12.3 0.0 4.2 7.1 0.0 2.2 2 0 0 2 2 2 0 DNA photolyase Macro PF01661.16 gi|15669158|ref|NP_247963.1| - 0.12 12.3 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Macro domain GHMP_kinases_N PF00288.21 gi|15669159|ref|NP_247964.1| - 8.4e-08 32.1 0.1 1.7e-07 31.2 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|15669159|ref|NP_247964.1| - 0.0065 16.6 0.2 0.16 12.1 0.0 2.6 3 0 0 3 3 3 1 GHMP kinases C terminal CbiX PF01903.12 gi|15669160|ref|NP_247965.1| - 4.9e-36 123.0 2.6 6.5e-36 122.6 1.8 1.2 1 0 0 1 1 1 1 CbiX CbiK PF06180.6 gi|15669160|ref|NP_247965.1| - 3.7e-06 26.2 0.1 4.9e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) NTPase_1 PF03266.10 gi|15669160|ref|NP_247965.1| - 9e-05 22.2 0.0 0.00012 21.8 0.0 1.1 1 0 0 1 1 1 1 NTPase Ferrochelatase PF00762.14 gi|15669160|ref|NP_247965.1| - 0.00021 20.3 0.0 0.00026 20.0 0.0 1.1 1 0 0 1 1 1 1 Ferrochelatase Zip PF02535.17 gi|15669160|ref|NP_247965.1| - 0.00078 18.5 2.6 0.00086 18.3 1.8 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter GSH-S_ATP PF02955.11 gi|15669160|ref|NP_247965.1| - 0.062 12.4 0.0 0.086 11.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain PDGF_N PF04692.8 gi|15669160|ref|NP_247965.1| - 0.064 13.7 2.1 0.12 12.8 1.4 1.4 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region Ribosomal_S5 PF00333.15 gi|15669160|ref|NP_247965.1| - 0.15 11.7 0.3 0.36 10.6 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein S5, N-terminal domain Innate_immun PF12782.2 gi|15669160|ref|NP_247965.1| - 0.98 8.5 9.6 1.1 8.4 6.7 1.1 1 0 0 1 1 1 0 Invertebrate innate immunity transcript family BAF1_ABF1 PF04684.8 gi|15669160|ref|NP_247965.1| - 1.3 7.8 9.1 1.4 7.6 6.3 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor SelP_N PF04592.9 gi|15669160|ref|NP_247965.1| - 4 6.7 13.3 5.4 6.3 9.2 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region NicO PF03824.11 gi|15669160|ref|NP_247965.1| - 5.9 6.1 6.3 7.7 5.7 4.4 1.2 1 0 0 1 1 1 0 High-affinity nickel-transport protein Peptidase_M50 PF02163.17 gi|15669161|ref|NP_247966.1| - 2.8e-23 81.8 3.2 2.8e-23 81.8 2.2 2.6 2 2 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 gi|15669161|ref|NP_247966.1| - 3.9e-09 36.2 0.0 9.2e-09 35.0 0.0 1.6 1 0 0 1 1 1 1 PDZ domain PDZ_1 PF12812.2 gi|15669161|ref|NP_247966.1| - 0.0015 18.4 0.0 0.0038 17.0 0.0 1.7 1 0 0 1 1 1 1 PDZ-like domain PDZ PF00595.19 gi|15669161|ref|NP_247966.1| - 0.002 18.2 0.0 0.0098 16.0 0.0 2.1 2 0 0 2 2 2 1 PDZ domain (Also known as DHR or GLGF) MarC PF01914.12 gi|15669162|ref|NP_247967.1| - 4.1e-74 248.1 12.7 4.6e-74 247.9 8.8 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF1129 PF06570.6 gi|15669162|ref|NP_247967.1| - 0.15 11.3 7.1 0.47 9.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF2721 PF11026.3 gi|15669162|ref|NP_247967.1| - 1.3 8.7 8.2 2.5 7.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF3099 PF11298.3 gi|15669162|ref|NP_247967.1| - 9.7 6.0 7.8 1 9.1 0.4 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF3099) PAPS_reduct PF01507.14 gi|15669163|ref|NP_247968.1| - 1.6e-54 184.3 0.0 3.2e-54 183.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.8 gi|15669163|ref|NP_247968.1| - 0.0064 15.7 0.0 0.013 14.7 0.0 1.5 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC DUF3067 PF11267.3 gi|15669163|ref|NP_247968.1| - 0.029 14.4 0.1 0.12 12.4 0.1 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3067) PIN PF01850.16 gi|15669164|ref|NP_247969.1| - 7.7e-28 97.2 0.5 8.8e-28 97.0 0.3 1.0 1 0 0 1 1 1 1 PIN domain DUF104 PF01954.11 gi|15669165|ref|NP_247970.1| - 9.5e-17 60.7 8.1 1.2e-16 60.5 5.6 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF104 Translin PF01997.11 gi|15669166|ref|NP_247971.1| - 0.029 13.9 3.6 0.18 11.3 1.1 2.3 2 0 0 2 2 2 0 Translin family PhaP_Bmeg PF09602.5 gi|15669166|ref|NP_247971.1| - 0.059 13.1 0.7 0.088 12.6 0.5 1.3 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) DUF4398 PF14346.1 gi|15669166|ref|NP_247971.1| - 0.14 12.2 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4398) Duffy_binding PF05424.6 gi|15669166|ref|NP_247971.1| - 0.28 11.0 5.8 0.55 10.0 4.0 1.5 1 1 0 1 1 1 0 Duffy binding domain PepSY_TM_2 PF13703.1 gi|15669166|ref|NP_247971.1| - 0.29 11.3 0.2 0.29 11.3 0.1 2.4 2 1 0 2 2 2 0 PepSY-associated TM helix Syntaxin-6_N PF09177.6 gi|15669166|ref|NP_247971.1| - 0.3 11.5 2.8 0.73 10.2 0.7 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF2524 PF10732.4 gi|15669166|ref|NP_247971.1| - 0.41 10.8 1.8 0.69 10.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2524) YlbD_coat PF14071.1 gi|15669166|ref|NP_247971.1| - 0.67 10.0 4.1 1.4 9.0 1.1 2.1 1 1 1 2 2 2 0 Putative coat protein DHHA1 PF02272.14 gi|15669167|ref|NP_247972.1| - 3.9e-15 55.3 0.0 2.7e-14 52.6 0.0 2.3 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.15 gi|15669167|ref|NP_247972.1| - 6.1e-15 55.1 0.5 1.1e-14 54.2 0.3 1.4 1 0 0 1 1 1 1 DHH family NDUF_B8 PF05821.6 gi|15669167|ref|NP_247972.1| - 0.016 14.8 0.1 0.029 14.0 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) DUF2276 PF10040.4 gi|15669168|ref|NP_247973.1| - 0.11 12.7 1.2 1.4 9.1 0.7 2.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2276) RAMPs PF03787.10 gi|15669168|ref|NP_247973.1| - 2.3 7.9 4.7 4.5 7.0 3.2 1.4 1 1 0 1 1 1 0 RAMP superfamily Cas_Cas6 PF01881.11 gi|15669168|ref|NP_247973.1| - 5.6 7.1 8.6 13 5.9 5.9 1.6 1 1 0 1 1 1 0 CRISPR associated protein Cas6 NdhL PF10716.4 gi|15669169|ref|NP_247974.1| - 0.0073 16.0 0.6 5.4 6.8 0.0 2.7 2 0 0 2 2 2 2 NADH dehydrogenase transmembrane subunit CDP-OH_P_tran_2 PF08009.6 gi|15669169|ref|NP_247974.1| - 0.051 13.3 0.5 0.051 13.3 0.4 3.1 4 0 0 4 4 4 0 CDP-alcohol phosphatidyltransferase 2 DUF3810 PF12725.2 gi|15669169|ref|NP_247974.1| - 0.086 11.7 0.5 0.15 10.9 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) MFS_1 PF07690.11 gi|15669169|ref|NP_247974.1| - 0.56 8.8 11.9 0.26 9.9 5.8 2.1 2 1 0 2 2 2 0 Major Facilitator Superfamily DUF4064 PF13273.1 gi|15669169|ref|NP_247974.1| - 3.2 7.9 15.9 1.7 8.7 6.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4418 PF14387.1 gi|15669169|ref|NP_247974.1| - 4.5 7.0 10.1 0.48 10.1 1.2 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4418) DUF4097 PF13349.1 gi|15669169|ref|NP_247974.1| - 8.5 5.8 11.4 0.097 12.2 0.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4097) Ribosomal_S3Ae PF01015.13 gi|15669170|ref|NP_247975.1| - 3e-70 235.5 4.7 3.4e-70 235.3 3.3 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Cyt-b5 PF00173.23 gi|15669170|ref|NP_247975.1| - 0.033 14.0 0.0 0.062 13.1 0.0 1.5 1 0 0 1 1 1 0 Cytochrome b5-like Heme/Steroid binding domain zf-DNL PF05180.7 gi|15669171|ref|NP_247976.1| - 5.4e-05 22.8 0.4 0.00011 21.7 0.3 1.5 1 0 0 1 1 1 1 DNL zinc finger zf-ribbon_3 PF13248.1 gi|15669171|ref|NP_247976.1| - 0.00077 18.5 1.0 0.12 11.5 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15669171|ref|NP_247976.1| - 0.0013 18.2 1.5 0.085 12.4 0.0 3.4 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15669171|ref|NP_247976.1| - 0.008 15.8 2.7 0.32 10.7 0.0 3.5 4 0 0 4 4 4 1 zinc-ribbon domain zf-ISL3 PF14690.1 gi|15669171|ref|NP_247976.1| - 0.013 15.5 0.5 0.35 10.9 0.0 2.4 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TF_Zn_Ribbon PF08271.7 gi|15669171|ref|NP_247976.1| - 0.016 14.5 2.4 0.067 12.5 1.7 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|15669171|ref|NP_247976.1| - 0.029 14.6 0.5 0.082 13.2 0.4 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar DNA_RNApol_7kD PF03604.8 gi|15669171|ref|NP_247976.1| - 0.03 13.8 0.5 8.8 5.8 0.0 2.6 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit A2L_zn_ribbon PF08792.5 gi|15669171|ref|NP_247976.1| - 0.034 13.6 2.1 5.9 6.4 0.0 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain Sgf11 PF08209.6 gi|15669171|ref|NP_247976.1| - 0.067 12.5 2.1 3.6 6.9 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zinc_ribbon_2 PF13240.1 gi|15669171|ref|NP_247976.1| - 0.085 12.3 2.9 2.4 7.7 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain GTP_EFTU_D2 PF03144.20 gi|15669171|ref|NP_247976.1| - 0.11 12.6 0.3 0.27 11.3 0.1 1.7 2 0 0 2 2 1 0 Elongation factor Tu domain 2 DUF3797 PF12677.2 gi|15669171|ref|NP_247976.1| - 0.16 11.5 4.5 6.8 6.3 0.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Cas_Csa5 PF09702.5 gi|15669171|ref|NP_247976.1| - 0.37 10.8 2.0 0.63 10.1 0.4 2.0 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Csa5) Zn-ribbon_8 PF09723.5 gi|15669171|ref|NP_247976.1| - 1.5 8.8 4.5 12 5.9 3.1 2.2 1 1 0 1 1 1 0 Zinc ribbon domain UPF0547 PF10571.4 gi|15669171|ref|NP_247976.1| - 2.5 7.9 4.5 7.5 6.3 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF1610 PF07754.6 gi|15669171|ref|NP_247976.1| - 9.1 6.4 11.3 6.7 6.9 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Ribosomal_S2 PF00318.15 gi|15669172|ref|NP_247977.1| - 2.9e-37 127.9 0.0 1.3e-17 63.7 0.0 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Ribosomal_L15e PF00827.12 gi|15669173|ref|NP_247978.1| - 6.3e-92 306.3 5.5 7.3e-92 306.1 3.8 1.0 1 0 0 1 1 1 1 Ribosomal L15 DUF3889 PF13028.1 gi|15669173|ref|NP_247978.1| - 0.15 11.7 1.5 3.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3889) DUF2874 PF11396.3 gi|15669173|ref|NP_247978.1| - 0.16 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2874) RE_MjaI PF09568.5 gi|15669174|ref|NP_247979.1| - 2.8e-71 238.5 6.9 3.5e-71 238.2 4.8 1.1 1 0 0 1 1 1 1 MjaI restriction endonuclease N6_N4_Mtase PF01555.13 gi|15669175|ref|NP_247980.1| - 1.4e-50 171.9 0.2 1.6e-50 171.7 0.2 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|15669175|ref|NP_247980.1| - 3e-10 40.1 0.0 0.00015 21.8 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|15669175|ref|NP_247980.1| - 0.0021 17.6 0.0 0.36 10.3 0.0 2.3 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Prefoldin_2 PF01920.15 gi|15669177|ref|NP_247982.1| - 4.2e-29 100.4 26.4 4.6e-29 100.2 18.3 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF812 PF05667.6 gi|15669177|ref|NP_247982.1| - 0.00054 18.6 9.6 0.00063 18.3 6.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Prefoldin PF02996.12 gi|15669177|ref|NP_247982.1| - 0.0011 18.5 19.2 0.011 15.3 4.9 2.3 1 1 1 2 2 2 2 Prefoldin subunit FlaC_arch PF05377.6 gi|15669177|ref|NP_247982.1| - 0.0024 17.7 18.3 0.0067 16.2 4.8 2.4 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.4 gi|15669177|ref|NP_247982.1| - 0.0057 16.5 24.9 0.023 14.5 4.8 2.1 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.6 gi|15669177|ref|NP_247982.1| - 0.0063 15.2 13.5 0.048 12.3 0.8 2.0 2 0 0 2 2 2 2 Spc7 kinetochore protein Laminin_II PF06009.7 gi|15669177|ref|NP_247982.1| - 0.014 15.1 13.9 0.047 13.4 9.7 1.8 1 1 0 1 1 1 0 Laminin Domain II DUF3418 PF11898.3 gi|15669177|ref|NP_247982.1| - 0.019 13.4 7.4 0.021 13.2 5.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) TBPIP PF07106.8 gi|15669177|ref|NP_247982.1| - 0.019 14.5 17.7 0.2 11.1 4.2 2.1 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Uds1 PF15456.1 gi|15669177|ref|NP_247982.1| - 0.02 14.8 13.0 0.024 14.6 9.0 1.1 1 0 0 1 1 1 0 Up-regulated During Septation DUF972 PF06156.8 gi|15669177|ref|NP_247982.1| - 0.022 15.1 19.2 0.098 13.0 4.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF972) DUF4140 PF13600.1 gi|15669177|ref|NP_247982.1| - 0.027 14.8 10.6 0.17 12.3 1.4 2.3 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Baculo_p24 PF05073.7 gi|15669177|ref|NP_247982.1| - 0.032 13.8 7.0 0.039 13.5 4.9 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Enamelin PF15362.1 gi|15669177|ref|NP_247982.1| - 0.053 11.6 0.5 0.056 11.5 0.3 1.0 1 0 0 1 1 1 0 Enamelin Rab5-bind PF09311.6 gi|15669177|ref|NP_247982.1| - 0.069 13.0 19.4 0.038 13.8 4.3 2.2 2 0 0 2 2 2 0 Rabaptin-like protein FUSC PF04632.7 gi|15669177|ref|NP_247982.1| - 0.084 11.2 0.3 0.1 11.0 0.2 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family ABC1 PF03109.11 gi|15669177|ref|NP_247982.1| - 0.085 12.8 4.7 0.36 10.7 0.3 2.0 2 0 0 2 2 2 0 ABC1 family Baculo_PEP_C PF04513.7 gi|15669177|ref|NP_247982.1| - 0.088 12.6 9.2 0.92 9.3 6.4 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus YlqD PF11068.3 gi|15669177|ref|NP_247982.1| - 0.15 12.0 21.1 0.2 11.6 5.4 2.2 2 0 0 2 2 2 0 YlqD protein DUF4407 PF14362.1 gi|15669177|ref|NP_247982.1| - 0.18 10.7 6.3 0.23 10.3 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Imm6 PF14434.1 gi|15669177|ref|NP_247982.1| - 0.19 11.4 5.7 0.078 12.6 1.8 1.8 1 1 1 2 2 2 0 Immunity protein Imm6 BLOC1_2 PF10046.4 gi|15669177|ref|NP_247982.1| - 0.2 11.8 15.4 1.4 9.1 3.3 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 XhlA PF10779.4 gi|15669177|ref|NP_247982.1| - 0.24 11.3 15.7 0.61 10.0 5.0 2.4 2 1 0 2 2 2 0 Haemolysin XhlA MutS_III PF05192.13 gi|15669177|ref|NP_247982.1| - 0.24 11.1 2.1 0.32 10.7 1.4 1.0 1 0 0 1 1 1 0 MutS domain III IncA PF04156.9 gi|15669177|ref|NP_247982.1| - 0.29 10.6 26.7 1.5 8.3 18.5 1.8 1 1 0 1 1 1 0 IncA protein T4SS PF07996.6 gi|15669177|ref|NP_247982.1| - 0.3 10.9 11.5 0.19 11.5 4.8 2.1 2 0 0 2 2 2 0 Type IV secretion system proteins DUF4201 PF13870.1 gi|15669177|ref|NP_247982.1| - 0.34 10.3 20.1 0.048 13.1 2.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4201) Apt1 PF10351.4 gi|15669177|ref|NP_247982.1| - 0.38 9.5 8.8 0.49 9.2 6.1 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DivIVA PF05103.8 gi|15669177|ref|NP_247982.1| - 0.42 10.6 14.2 2.3 8.2 1.0 2.2 2 0 0 2 2 2 0 DivIVA protein NPV_P10 PF05531.7 gi|15669177|ref|NP_247982.1| - 0.46 10.7 11.7 1.5 9.1 1.1 2.6 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.1 gi|15669177|ref|NP_247982.1| - 0.48 10.3 24.6 0.1 12.5 6.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Atg14 PF10186.4 gi|15669177|ref|NP_247982.1| - 0.49 9.2 14.4 0.75 8.6 10.0 1.3 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Reo_sigmaC PF04582.7 gi|15669177|ref|NP_247982.1| - 0.51 9.4 2.2 1.4 8.0 1.5 1.6 1 1 0 1 1 1 0 Reovirus sigma C capsid protein Prefoldin_3 PF13758.1 gi|15669177|ref|NP_247982.1| - 0.53 10.0 8.2 0.74 9.6 5.7 1.2 1 0 0 1 1 1 0 Prefoldin subunit PRP1_N PF06424.7 gi|15669177|ref|NP_247982.1| - 0.55 10.5 8.6 1.3 9.3 6.0 1.6 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal Snapin_Pallidin PF14712.1 gi|15669177|ref|NP_247982.1| - 0.56 10.5 17.9 0.5 10.7 3.8 2.2 2 0 0 2 2 2 0 Snapin/Pallidin Rotamase PF00639.16 gi|15669177|ref|NP_247982.1| - 0.56 10.9 8.1 0.16 12.7 0.8 2.3 1 1 1 2 2 2 0 PPIC-type PPIASE domain Filament PF00038.16 gi|15669177|ref|NP_247982.1| - 0.61 9.5 20.3 4.9 6.5 4.6 2.1 1 1 1 2 2 2 0 Intermediate filament protein WXG100 PF06013.7 gi|15669177|ref|NP_247982.1| - 0.63 10.0 8.4 4 7.4 0.1 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG PilJ PF13675.1 gi|15669177|ref|NP_247982.1| - 0.66 10.3 8.8 1.1 9.5 0.4 2.3 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term Sipho_Gp157 PF05565.6 gi|15669177|ref|NP_247982.1| - 0.68 9.5 13.7 1.2 8.6 9.5 1.4 1 1 0 1 1 1 0 Siphovirus Gp157 PspA_IM30 PF04012.7 gi|15669177|ref|NP_247982.1| - 0.69 9.2 18.1 0.99 8.7 5.3 2.2 2 0 0 2 2 2 0 PspA/IM30 family Ax_dynein_light PF10211.4 gi|15669177|ref|NP_247982.1| - 0.7 9.7 18.7 0.14 11.9 4.8 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain Bcr-Abl_Oligo PF09036.5 gi|15669177|ref|NP_247982.1| - 0.7 9.8 6.6 0.12 12.2 0.5 2.0 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain AAA_13 PF13166.1 gi|15669177|ref|NP_247982.1| - 0.71 8.2 18.0 0.42 9.0 4.8 1.9 1 1 1 2 2 2 0 AAA domain TIR-like PF10137.4 gi|15669177|ref|NP_247982.1| - 0.73 9.4 3.8 0.8 9.3 0.5 1.9 2 0 0 2 2 2 0 Predicted nucleotide-binding protein containing TIR-like domain COG5 PF10392.4 gi|15669177|ref|NP_247982.1| - 0.78 9.6 9.7 1.7 8.6 6.1 1.9 1 1 0 1 1 1 0 Golgi transport complex subunit 5 Mnd1 PF03962.10 gi|15669177|ref|NP_247982.1| - 0.86 9.2 19.1 3.6 7.2 4.2 2.1 1 1 1 2 2 2 0 Mnd1 family DUF4164 PF13747.1 gi|15669177|ref|NP_247982.1| - 0.89 9.7 13.6 0.99 9.5 2.3 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) Vfa1 PF08432.5 gi|15669177|ref|NP_247982.1| - 0.93 9.4 7.9 1.2 9.1 5.5 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Laminin_I PF06008.9 gi|15669177|ref|NP_247982.1| - 0.93 8.7 18.5 66 2.6 13.1 2.0 1 1 0 1 1 1 0 Laminin Domain I CDC37_N PF03234.9 gi|15669177|ref|NP_247982.1| - 1.2 9.4 18.7 11 6.3 13.0 1.9 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding Ribosomal_S20p PF01649.13 gi|15669177|ref|NP_247982.1| - 1.2 9.5 4.5 82 3.6 3.2 2.3 1 1 0 1 1 1 0 Ribosomal protein S20 Exonuc_VII_L PF02601.10 gi|15669177|ref|NP_247982.1| - 1.2 8.2 9.7 1.4 7.9 6.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Myosin_tail_1 PF01576.14 gi|15669177|ref|NP_247982.1| - 1.4 6.5 24.7 7 4.2 17.2 1.8 1 1 0 1 1 1 0 Myosin tail Tropomyosin_1 PF12718.2 gi|15669177|ref|NP_247982.1| - 1.4 8.7 25.9 1.4 8.7 8.5 1.8 1 1 0 2 2 2 0 Tropomyosin like DUF87 PF01935.12 gi|15669177|ref|NP_247982.1| - 1.5 8.6 5.4 1.7 8.3 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF87 ALIX_LYPXL_bnd PF13949.1 gi|15669177|ref|NP_247982.1| - 1.5 7.7 18.2 5.6 5.8 12.8 1.6 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV DUF4446 PF14584.1 gi|15669177|ref|NP_247982.1| - 1.6 8.5 14.9 1.1 9.0 3.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF2400 PF09674.5 gi|15669177|ref|NP_247982.1| - 1.6 8.3 8.4 2.2 7.9 1.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2400) Sec16 PF12932.2 gi|15669177|ref|NP_247982.1| - 1.7 8.6 4.9 2.4 8.1 3.4 1.3 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region Vac_Fusion PF02346.11 gi|15669177|ref|NP_247982.1| - 1.7 8.0 9.3 2.1 7.8 1.4 2.3 2 0 0 2 2 2 0 Chordopoxvirus fusion protein AMP-binding_C_2 PF14535.1 gi|15669177|ref|NP_247982.1| - 1.8 8.6 9.1 37 4.4 6.3 2.3 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain DNA_topoisoIV PF00521.15 gi|15669177|ref|NP_247982.1| - 1.8 7.2 11.7 2.3 6.9 8.1 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A Med9 PF07544.8 gi|15669177|ref|NP_247982.1| - 2 8.1 16.3 28 4.5 11.3 2.3 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 5_nucleotid PF05761.9 gi|15669177|ref|NP_247982.1| - 2.2 6.7 11.1 0.09 11.2 1.2 2.0 1 1 1 2 2 2 0 5' nucleotidase family Spc24 PF08286.6 gi|15669177|ref|NP_247982.1| - 2.3 7.9 22.0 6.4 6.5 6.1 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Seryl_tRNA_N PF02403.17 gi|15669177|ref|NP_247982.1| - 2.5 8.1 20.0 1.5 8.8 10.1 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Prominin PF05478.6 gi|15669177|ref|NP_247982.1| - 2.7 5.4 15.4 10 3.5 2.8 1.8 1 1 1 2 2 2 0 Prominin DASH_Dam1 PF08653.5 gi|15669177|ref|NP_247982.1| - 2.8 7.7 6.6 2.1 8.1 0.2 2.8 2 2 0 2 2 2 0 DASH complex subunit Dam1 FliD_N PF02465.13 gi|15669177|ref|NP_247982.1| - 3.2 8.1 13.0 2.2 8.6 2.7 2.2 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF2968 PF11180.3 gi|15669177|ref|NP_247982.1| - 3.3 7.0 21.3 3.3 7.0 3.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Med4 PF10018.4 gi|15669177|ref|NP_247982.1| - 3.5 6.9 21.2 6.2 6.1 4.8 2.0 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DASH_Spc34 PF08657.5 gi|15669177|ref|NP_247982.1| - 3.8 7.1 15.4 5.1 6.6 8.1 2.0 1 1 1 2 2 2 0 DASH complex subunit Spc34 SPOUT_MTase PF02590.12 gi|15669177|ref|NP_247982.1| - 3.9 7.1 7.7 1.9 8.1 0.2 2.0 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase Arc_PepC_II PF06847.6 gi|15669177|ref|NP_247982.1| - 4 7.9 6.6 13 6.2 0.2 2.1 1 1 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II TMCO5 PF14992.1 gi|15669177|ref|NP_247982.1| - 4 6.4 21.0 8 5.5 14.6 1.4 1 1 0 1 1 1 0 TMCO5 family Nsp1_C PF05064.8 gi|15669177|ref|NP_247982.1| - 4.1 7.0 19.1 4.4 6.9 3.7 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region Flagellin_N PF00669.15 gi|15669177|ref|NP_247982.1| - 4.3 7.1 8.3 2.5 7.9 2.5 2.0 1 1 1 2 2 2 0 Bacterial flagellin N-terminal helical region DUF4618 PF15397.1 gi|15669177|ref|NP_247982.1| - 4.3 6.5 24.7 1.5 8.1 7.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) Borrelia_P83 PF05262.6 gi|15669177|ref|NP_247982.1| - 4.6 5.3 12.8 6.3 4.9 8.9 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein Mga PF05043.8 gi|15669177|ref|NP_247982.1| - 4.6 7.5 8.4 5.3 7.4 1.5 2.2 1 1 1 2 2 2 0 Mga helix-turn-helix domain V_ATPase_I PF01496.14 gi|15669177|ref|NP_247982.1| - 4.7 4.9 17.8 24 2.6 12.4 1.7 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF342 PF03961.8 gi|15669177|ref|NP_247982.1| - 4.7 5.5 17.5 8.9 4.5 12.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF342) DUF1664 PF07889.7 gi|15669177|ref|NP_247982.1| - 4.9 6.9 13.9 2 8.2 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.5 gi|15669177|ref|NP_247982.1| - 4.9 7.2 18.7 60 3.7 12.5 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family HemX PF04375.9 gi|15669177|ref|NP_247982.1| - 5.1 5.5 12.2 12 4.4 8.4 1.6 1 1 0 1 1 1 0 HemX DUF2408 PF10303.4 gi|15669177|ref|NP_247982.1| - 5.5 7.1 17.9 3 7.9 2.7 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) Syntaxin-6_N PF09177.6 gi|15669177|ref|NP_247982.1| - 5.6 7.4 13.1 6.7 7.1 1.9 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal ATG16 PF08614.6 gi|15669177|ref|NP_247982.1| - 6.2 6.6 19.4 1.4 8.6 2.4 2.0 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Cortex-I_coil PF09304.5 gi|15669177|ref|NP_247982.1| - 6.5 6.8 22.7 3.6 7.6 5.9 2.1 1 1 0 2 2 2 0 Cortexillin I, coiled coil DUF489 PF04356.7 gi|15669177|ref|NP_247982.1| - 6.6 6.2 9.8 11 5.5 6.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF489) FliD_C PF07195.7 gi|15669177|ref|NP_247982.1| - 6.7 5.9 10.3 0.77 9.0 1.7 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus DUF948 PF06103.6 gi|15669177|ref|NP_247982.1| - 7.1 6.5 14.6 0.98 9.3 3.0 2.3 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Herpes_UL6 PF01763.11 gi|15669177|ref|NP_247982.1| - 7.2 4.6 17.6 2.9 5.9 2.7 2.0 1 1 1 2 2 2 0 Herpesvirus UL6 like GP41 PF00517.12 gi|15669177|ref|NP_247982.1| - 7.3 6.0 9.3 1.8 8.0 0.5 2.2 2 0 0 2 2 2 0 Retroviral envelope protein DUF4404 PF14357.1 gi|15669177|ref|NP_247982.1| - 7.6 7.0 17.9 3.3 8.1 4.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) KfrA_N PF11740.3 gi|15669177|ref|NP_247982.1| - 7.9 6.9 16.7 2.3 8.6 2.5 2.1 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term SlyX PF04102.7 gi|15669177|ref|NP_247982.1| - 8.7 6.8 22.1 1.1 9.6 3.2 2.5 2 1 0 2 2 2 0 SlyX Fmp27_WPPW PF10359.4 gi|15669177|ref|NP_247982.1| - 9.3 4.5 13.8 15 3.8 9.6 1.3 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain CENP-Q PF13094.1 gi|15669177|ref|NP_247982.1| - 9.9 6.1 22.4 7.2 6.6 4.1 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DHH PF01368.15 gi|15669178|ref|NP_247983.1| - 1.2e-19 70.4 0.2 2e-19 69.6 0.1 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|15669178|ref|NP_247983.1| - 1.8e-13 49.9 1.3 1.3e-12 47.2 0.3 2.2 2 0 0 2 2 2 1 DHHA1 domain DrsE PF02635.10 gi|15669179|ref|NP_247984.1| - 1e-25 90.1 0.1 1.1e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.1 gi|15669179|ref|NP_247984.1| - 2.3e-05 24.1 0.3 0.0031 17.3 0.0 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DsrH PF04077.7 gi|15669179|ref|NP_247984.1| - 0.00097 18.7 0.0 0.0036 16.9 0.0 1.8 1 1 0 1 1 1 1 DsrH like protein TusA PF01206.12 gi|15669180|ref|NP_247985.1| - 1.6e-24 85.2 0.1 1.8e-24 85.1 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|15669180|ref|NP_247985.1| - 7e-05 22.3 0.0 0.00014 21.3 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) GHMP_kinases_C PF08544.8 gi|15669180|ref|NP_247985.1| - 0.035 14.2 0.0 0.048 13.8 0.0 1.2 1 0 0 1 1 1 0 GHMP kinases C terminal NLE PF08154.7 gi|15669181|ref|NP_247986.1| - 0.0056 16.6 0.1 0.011 15.7 0.0 1.5 1 0 0 1 1 1 1 NLE (NUC135) domain Ribosomal_L14e PF01929.12 gi|15669181|ref|NP_247986.1| - 0.018 15.3 0.6 0.047 14.0 0.4 1.8 1 0 0 1 1 1 0 Ribosomal protein L14 DUF4258 PF14076.1 gi|15669181|ref|NP_247986.1| - 1 9.4 6.9 1.3 9.1 0.3 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4258) BH4 PF02180.12 gi|15669181|ref|NP_247986.1| - 1.5 8.4 3.6 0.61 9.6 0.4 2.0 2 0 0 2 2 2 0 Bcl-2 homology region 4 HEPN PF05168.9 gi|15669182|ref|NP_247987.1| - 0.011 15.6 0.8 0.047 13.5 0.4 2.1 1 1 0 1 1 1 0 HEPN domain Latarcin PF10279.4 gi|15669182|ref|NP_247987.1| - 0.16 12.1 1.2 0.66 10.2 0.9 2.2 1 1 0 1 1 1 0 Latarcin precursor Erp_C PF06780.6 gi|15669182|ref|NP_247987.1| - 1 9.1 7.0 1.3 8.8 0.7 2.4 1 1 0 2 2 2 0 Erp protein C-terminus HypD PF01924.11 gi|15669183|ref|NP_247988.1| - 8.4e-150 498.4 0.5 9.5e-150 498.2 0.4 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HEM4 PF02602.10 gi|15669184|ref|NP_247989.1| - 4.8e-47 160.1 0.0 5.5e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD ABC2_membrane_3 PF12698.2 gi|15669184|ref|NP_247989.1| - 0.018 14.0 0.7 0.023 13.7 0.5 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Pico_P2A PF00947.14 gi|15669185|ref|NP_247990.1| - 0.1 12.4 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Picornavirus core protein 2A PmbA_TldD PF01523.11 gi|15669186|ref|NP_247991.1| - 1.9e-85 286.6 0.8 2.5e-85 286.3 0.5 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Ribosomal_L32e PF01655.13 gi|15669186|ref|NP_247991.1| - 0.14 12.2 0.1 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L32 SHOCT PF09851.4 gi|15669187|ref|NP_247992.1| - 0.0013 18.1 0.3 0.0084 15.5 0.0 2.2 2 0 0 2 2 2 1 Short C-terminal domain DUF1394 PF07159.7 gi|15669187|ref|NP_247992.1| - 0.031 13.3 0.3 0.046 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1394) PRESAN PF09687.5 gi|15669187|ref|NP_247992.1| - 0.097 12.7 4.2 0.15 12.1 2.9 1.2 1 0 0 1 1 1 0 Plasmodium RESA N-terminal Sec16_C PF12931.2 gi|15669187|ref|NP_247992.1| - 0.12 12.0 0.2 0.18 11.5 0.1 1.1 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 Cpn60_TCP1 PF00118.19 gi|15669188|ref|NP_247993.1| - 2.1e-177 590.6 18.5 2.3e-177 590.4 12.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF1729 PF08354.5 gi|15669188|ref|NP_247993.1| - 0.027 14.2 0.6 0.13 12.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1729) tRNA-synt_His PF13393.1 gi|15669189|ref|NP_247994.1| - 5.5e-76 255.5 0.0 7.1e-76 255.2 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|15669189|ref|NP_247994.1| - 2.4e-26 92.3 0.3 4.1e-26 91.6 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|15669189|ref|NP_247994.1| - 2.5e-13 49.7 1.0 2.5e-13 49.7 0.7 2.1 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2 PF00152.15 gi|15669189|ref|NP_247994.1| - 8.3e-07 28.0 3.5 0.00056 18.7 0.6 2.5 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.15 gi|15669189|ref|NP_247994.1| - 3.5e-05 23.1 0.1 0.00012 21.3 0.0 2.0 2 1 0 2 2 2 1 tRNA synthetases class II core domain (F) YqzH PF14164.1 gi|15669189|ref|NP_247994.1| - 0.93 9.4 3.8 1.6 8.7 0.1 2.9 3 0 0 3 3 3 0 YqzH-like protein RimK PF08443.6 gi|15669190|ref|NP_247995.1| - 9.8e-71 237.1 0.1 1.3e-70 236.7 0.1 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 gi|15669190|ref|NP_247995.1| - 1.3e-14 54.3 0.0 1.8e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|15669190|ref|NP_247995.1| - 6.6e-11 42.3 0.0 1.6e-10 41.1 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 gi|15669190|ref|NP_247995.1| - 2.7e-10 39.6 0.0 3.8e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain CPSase_L_D2 PF02786.12 gi|15669190|ref|NP_247995.1| - 5.7e-05 22.5 0.0 0.00031 20.0 0.0 1.9 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.17 gi|15669190|ref|NP_247995.1| - 0.0015 17.8 0.0 0.0029 16.9 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|15669190|ref|NP_247995.1| - 0.002 16.9 0.1 0.011 14.5 0.1 1.9 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_YheCD PF14398.1 gi|15669190|ref|NP_247995.1| - 0.0081 14.9 0.2 0.16 10.7 0.0 2.3 2 1 0 2 2 2 1 YheC/D like ATP-grasp GARS_A PF01071.14 gi|15669190|ref|NP_247995.1| - 0.031 13.8 0.1 0.047 13.2 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ins134_P3_kin PF05770.6 gi|15669190|ref|NP_247995.1| - 0.061 12.3 0.0 1.9 7.4 0.0 2.2 2 0 0 2 2 2 0 Inositol 1, 3, 4-trisphosphate 5/6-kinase ATP-grasp_5 PF13549.1 gi|15669190|ref|NP_247995.1| - 0.099 11.8 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain DisA_N PF02457.11 gi|15669191|ref|NP_247996.1| - 2.8e-29 100.7 0.2 2.8e-29 100.7 0.1 2.7 3 1 0 3 3 3 1 DisA bacterial checkpoint controller nucleotide-binding PK_C PF02887.11 gi|15669191|ref|NP_247996.1| - 1.5e-09 37.3 1.1 6.3e-06 25.7 0.1 3.0 2 1 1 3 3 3 2 Pyruvate kinase, alpha/beta domain ParA PF10609.4 gi|15669191|ref|NP_247996.1| - 0.039 13.8 0.2 9.6 6.1 0.0 2.8 3 0 0 3 3 3 0 ParA/MinD ATPase like Aconitase PF00330.15 gi|15669192|ref|NP_247997.1| - 1.6e-91 307.1 4.6 2.8e-60 204.1 1.3 2.0 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) CBS PF00571.23 gi|15669193|ref|NP_247998.1| - 8e-20 70.3 2.4 2e-10 40.2 0.0 2.6 3 0 0 3 3 3 2 CBS domain Cache_3 PF14827.1 gi|15669193|ref|NP_247998.1| - 0.042 13.7 0.1 10 6.0 0.0 2.6 3 0 0 3 3 3 0 Sensory domain of two-component sensor kinase TAFII28 PF04719.9 gi|15669193|ref|NP_247998.1| - 0.061 13.1 0.8 0.49 10.2 0.0 2.6 2 1 1 3 3 3 0 hTAFII28-like protein conserved region Sar8_2 PF03058.9 gi|15669193|ref|NP_247998.1| - 0.082 13.2 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Sar8.2 family HTH_11 PF08279.7 gi|15669194|ref|NP_247999.1| - 6.2e-14 51.3 0.0 9.7e-14 50.7 0.0 1.3 1 0 0 1 1 1 1 HTH domain HrcA_DNA-bdg PF03444.10 gi|15669194|ref|NP_247999.1| - 3.4e-05 23.1 0.0 0.00014 21.1 0.0 1.9 1 1 1 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DUF4441 PF14536.1 gi|15669194|ref|NP_247999.1| - 0.61 10.0 4.7 1.1 9.2 3.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Arch_ATPase PF01637.13 gi|15669195|ref|NP_248000.1| - 1.3e-54 185.3 10.2 1.3e-54 185.3 7.0 1.8 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|15669195|ref|NP_248000.1| - 1.6e-07 31.5 0.0 5e-07 29.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|15669195|ref|NP_248000.1| - 3e-07 30.6 0.0 2.3e-06 27.7 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|15669195|ref|NP_248000.1| - 3.4e-07 30.2 9.1 4.4e-05 23.3 0.0 3.4 2 1 1 3 3 3 2 AAA domain AAA PF00004.24 gi|15669195|ref|NP_248000.1| - 1.4e-06 28.5 0.3 7e-06 26.2 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA12 PF10443.4 gi|15669195|ref|NP_248000.1| - 0.00021 19.9 0.3 0.017 13.6 0.0 2.4 3 0 0 3 3 3 1 RNA12 protein RecA PF00154.16 gi|15669195|ref|NP_248000.1| - 0.0015 17.6 0.0 0.0038 16.3 0.0 1.6 2 0 0 2 2 2 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|15669195|ref|NP_248000.1| - 0.0017 17.8 0.0 0.0062 16.0 0.0 1.9 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) DUF2075 PF09848.4 gi|15669195|ref|NP_248000.1| - 0.0054 15.7 0.0 0.0084 15.1 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.7 gi|15669195|ref|NP_248000.1| - 0.0056 16.3 0.1 0.031 13.9 0.0 2.2 2 1 0 2 2 2 1 NACHT domain MobB PF03205.9 gi|15669195|ref|NP_248000.1| - 0.0075 15.9 0.0 0.021 14.5 0.0 1.9 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.1 gi|15669195|ref|NP_248000.1| - 0.0087 16.8 0.5 0.034 14.9 0.3 2.3 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|15669195|ref|NP_248000.1| - 0.023 13.6 0.0 0.043 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TK PF00265.13 gi|15669195|ref|NP_248000.1| - 0.024 14.1 1.8 0.41 10.1 0.0 3.0 3 0 0 3 3 3 0 Thymidine kinase AAA_25 PF13481.1 gi|15669195|ref|NP_248000.1| - 0.026 13.9 0.0 0.13 11.6 0.0 2.0 1 1 0 1 1 1 0 AAA domain tRNA-synt_1 PF00133.17 gi|15669196|ref|NP_248001.1| - 2.9e-160 534.1 5.8 1.9e-159 531.5 4.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|15669196|ref|NP_248001.1| - 3e-34 117.9 1.0 8e-34 116.6 0.7 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|15669196|ref|NP_248001.1| - 4.2e-27 94.8 10.1 4.5e-16 58.5 0.0 4.1 4 0 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|15669196|ref|NP_248001.1| - 7.7e-06 25.2 0.0 0.025 13.7 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|15669196|ref|NP_248001.1| - 1.2e-05 24.1 0.0 0.00014 20.7 0.4 2.4 2 1 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.1 gi|15669196|ref|NP_248001.1| - 2.1e-05 23.9 0.2 0.00032 20.0 0.0 2.8 2 1 1 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.14 gi|15669196|ref|NP_248001.1| - 0.0053 15.6 0.0 4.1 6.1 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (R) DZR PF12773.2 gi|15669196|ref|NP_248001.1| - 0.0075 16.0 1.6 0.18 11.6 0.1 3.1 3 0 0 3 3 3 1 Double zinc ribbon IBR PF01485.16 gi|15669196|ref|NP_248001.1| - 0.0097 15.7 0.9 13 5.7 0.1 3.3 3 0 0 3 3 3 0 IBR domain tRNA-synt_1b PF00579.20 gi|15669196|ref|NP_248001.1| - 0.055 12.5 0.0 1.4 7.9 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Nudix_N_2 PF14803.1 gi|15669196|ref|NP_248001.1| - 0.097 12.3 3.5 0.086 12.5 0.4 2.4 2 0 0 2 2 2 0 Nudix N-terminal DNA_ligase_ZBD PF03119.11 gi|15669196|ref|NP_248001.1| - 0.2 11.3 1.5 1.1 9.0 0.2 2.6 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-TFIIB PF13453.1 gi|15669196|ref|NP_248001.1| - 0.9 8.7 3.5 12 5.2 0.1 3.2 2 1 1 3 3 3 0 Transcription factor zinc-finger ADK_lid PF05191.9 gi|15669196|ref|NP_248001.1| - 1.1 8.9 7.5 3 7.5 3.2 3.0 2 1 0 2 2 2 0 Adenylate kinase, active site lid DUF1610 PF07754.6 gi|15669196|ref|NP_248001.1| - 2.2 8.4 8.3 8.3 6.6 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-ribbon_3 PF13248.1 gi|15669196|ref|NP_248001.1| - 2.5 7.4 7.5 1 8.6 0.1 3.4 4 0 0 4 4 4 0 zinc-ribbon domain Aminotran_4 PF01063.14 gi|15669197|ref|NP_248002.1| - 1.2e-55 188.4 0.0 1.4e-55 188.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class IV DUF1945 PF09178.5 gi|15669197|ref|NP_248002.1| - 0.056 13.3 0.3 2.5 8.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1945) PhoU PF01895.14 gi|15669198|ref|NP_248003.1| - 4.6e-32 110.3 12.5 2.6e-19 69.4 2.2 2.6 3 0 0 3 3 3 2 PhoU domain BBS2_Mid PF14783.1 gi|15669198|ref|NP_248003.1| - 0.059 13.1 1.5 0.33 10.7 0.0 2.2 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region FliD_C PF07195.7 gi|15669198|ref|NP_248003.1| - 1.8 7.7 7.0 0.43 9.8 0.4 2.6 3 0 0 3 3 3 0 Flagellar hook-associated protein 2 C-terminus Arch_ATPase PF01637.13 gi|15669199|ref|NP_248004.1| - 6.7e-87 291.0 12.5 6.7e-87 291.0 8.6 1.9 1 1 1 2 2 2 1 Archaeal ATPase RNA12 PF10443.4 gi|15669199|ref|NP_248004.1| - 9.6e-11 40.8 0.0 0.00016 20.2 0.0 2.2 2 0 0 2 2 2 2 RNA12 protein AAA_14 PF13173.1 gi|15669199|ref|NP_248004.1| - 6.6e-08 32.5 14.1 5e-05 23.2 0.6 3.6 1 1 1 3 3 3 2 AAA domain AAA PF00004.24 gi|15669199|ref|NP_248004.1| - 7.5e-08 32.6 0.9 0.24 11.5 0.0 3.3 2 1 1 3 3 3 3 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|15669199|ref|NP_248004.1| - 1.2e-06 28.7 1.1 3.6e-05 23.9 0.0 3.3 1 1 2 3 3 3 1 AAA domain AAA_16 PF13191.1 gi|15669199|ref|NP_248004.1| - 2e-06 27.9 0.0 7e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain MobB PF03205.9 gi|15669199|ref|NP_248004.1| - 0.0023 17.6 0.0 0.0058 16.3 0.0 1.9 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_10 PF12846.2 gi|15669199|ref|NP_248004.1| - 0.0023 17.4 0.1 0.057 12.8 0.0 2.5 1 1 2 3 3 3 1 AAA-like domain cobW PF02492.14 gi|15669199|ref|NP_248004.1| - 0.013 14.9 0.0 0.078 12.4 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain KAP_NTPase PF07693.9 gi|15669199|ref|NP_248004.1| - 0.013 14.4 0.6 2.4 7.0 0.0 2.3 1 1 1 2 2 2 0 KAP family P-loop domain NB-ARC PF00931.17 gi|15669199|ref|NP_248004.1| - 0.015 14.1 0.1 0.54 9.0 0.0 2.6 3 0 0 3 3 3 0 NB-ARC domain TK PF00265.13 gi|15669199|ref|NP_248004.1| - 0.024 14.1 2.6 0.13 11.7 0.0 3.0 3 1 1 4 4 4 0 Thymidine kinase Zot PF05707.7 gi|15669199|ref|NP_248004.1| - 0.029 13.8 0.2 0.33 10.4 0.0 2.4 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) Nit_Regul_Hom PF10126.4 gi|15669199|ref|NP_248004.1| - 0.047 13.4 4.3 0.17 11.6 0.1 3.2 3 1 0 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF3922 PF13059.1 gi|15669199|ref|NP_248004.1| - 0.053 13.7 1.2 2.4 8.3 0.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3992) AAA_17 PF13207.1 gi|15669199|ref|NP_248004.1| - 0.063 14.0 3.9 1.5 9.6 2.7 2.9 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|15669199|ref|NP_248004.1| - 0.2 11.6 5.6 0.052 13.5 0.9 2.3 2 2 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.1 gi|15669199|ref|NP_248004.1| - 2.2 8.6 6.8 1.1 9.5 0.1 3.1 1 1 1 3 3 3 0 AAA domain PhoU PF01895.14 gi|15669200|ref|NP_248005.1| - 0.0012 19.2 0.6 0.0012 19.2 0.4 2.1 2 1 1 3 3 3 1 PhoU domain FliS PF02561.9 gi|15669200|ref|NP_248005.1| - 0.32 10.8 3.0 0.58 10.0 2.1 1.5 1 1 0 1 1 1 0 Flagellar protein FliS Orthopox_B11R PF07033.6 gi|15669200|ref|NP_248005.1| - 2.5 7.6 10.2 1.6 8.2 1.3 2.5 1 1 1 2 2 2 0 Orthopoxvirus B11R protein ABC_tran PF00005.22 gi|15669201|ref|NP_248006.1| - 3e-32 111.7 0.0 4.1e-32 111.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669201|ref|NP_248006.1| - 3.8e-13 50.0 0.0 1e-05 25.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|15669201|ref|NP_248006.1| - 2.1e-07 30.4 0.1 3.4e-05 23.1 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|15669201|ref|NP_248006.1| - 0.00015 22.1 0.4 0.00033 21.0 0.0 1.7 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|15669201|ref|NP_248006.1| - 0.00021 20.4 0.2 0.25 10.3 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|15669201|ref|NP_248006.1| - 0.00032 19.9 0.0 0.0006 19.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|15669201|ref|NP_248006.1| - 0.00035 20.7 0.1 0.0011 19.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|15669201|ref|NP_248006.1| - 0.00084 18.8 0.0 0.0017 17.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|15669201|ref|NP_248006.1| - 0.0023 17.9 0.0 0.018 15.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.10 gi|15669201|ref|NP_248006.1| - 0.0049 15.6 0.0 0.009 14.7 0.0 1.4 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_10 PF12846.2 gi|15669201|ref|NP_248006.1| - 0.0059 16.0 0.0 0.025 14.0 0.0 1.9 1 1 1 2 2 2 1 AAA-like domain AAA_33 PF13671.1 gi|15669201|ref|NP_248006.1| - 0.006 16.4 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15669201|ref|NP_248006.1| - 0.008 16.9 0.4 0.025 15.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.4 gi|15669201|ref|NP_248006.1| - 0.023 13.3 0.0 0.96 7.9 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Adeno_IVa2 PF02456.10 gi|15669201|ref|NP_248006.1| - 0.033 12.8 0.0 0.34 9.4 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_18 PF13238.1 gi|15669201|ref|NP_248006.1| - 0.041 14.1 0.0 0.079 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|15669201|ref|NP_248006.1| - 0.045 13.6 0.0 0.13 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.1 gi|15669201|ref|NP_248006.1| - 0.07 12.8 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 0 Part of AAA domain AAA_25 PF13481.1 gi|15669201|ref|NP_248006.1| - 0.13 11.6 0.0 0.31 10.4 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA PF00004.24 gi|15669201|ref|NP_248006.1| - 0.14 12.3 0.0 1.1 9.4 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.20 gi|15669201|ref|NP_248006.1| - 0.17 11.3 0.1 0.6 9.5 0.1 1.9 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain BPD_transp_1 PF00528.17 gi|15669202|ref|NP_248007.1| - 8.3e-15 54.7 16.9 8.3e-15 54.7 11.7 2.5 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component FtsX PF02687.16 gi|15669202|ref|NP_248007.1| - 2.7 7.7 28.8 0.91 9.2 6.0 3.8 2 1 1 3 3 3 0 FtsX-like permease family DUF3042 PF11240.3 gi|15669202|ref|NP_248007.1| - 5.1 6.9 8.2 19 5.1 0.2 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) BPD_transp_1 PF00528.17 gi|15669203|ref|NP_248008.1| - 2.4e-13 50.0 14.7 2.4e-13 50.0 10.2 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF996 PF06195.8 gi|15669203|ref|NP_248008.1| - 0.045 13.7 0.8 0.045 13.7 0.5 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF996) Holin_BlyA PF05102.7 gi|15669203|ref|NP_248008.1| - 0.12 12.0 6.5 0.072 12.8 2.4 2.3 2 0 0 2 2 2 0 holin, BlyA family PIRT PF15099.1 gi|15669203|ref|NP_248008.1| - 0.17 11.0 1.5 0.4 9.9 0.1 2.2 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family Amastin PF07344.6 gi|15669203|ref|NP_248008.1| - 6.7 6.3 7.2 0.82 9.2 0.7 2.3 2 1 0 2 2 2 0 Amastin surface glycoprotein PBP_like_2 PF12849.2 gi|15669204|ref|NP_248009.1| - 1.6e-51 175.4 0.9 2.1e-51 175.0 0.6 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.20 gi|15669204|ref|NP_248009.1| - 2.9e-27 96.2 7.7 3.7e-27 95.8 5.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.2 gi|15669204|ref|NP_248009.1| - 2.1e-06 26.7 0.0 1.2e-05 24.3 0.0 2.0 1 1 0 1 1 1 1 PBP superfamily domain QueC PF06508.8 gi|15669205|ref|NP_248010.1| - 6.9e-07 28.7 0.0 2e-05 23.9 0.0 2.3 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|15669205|ref|NP_248010.1| - 4.6e-06 26.2 0.2 2.8e-05 23.6 0.0 2.2 3 0 0 3 3 3 1 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.14 gi|15669205|ref|NP_248010.1| - 2.4e-05 24.2 0.0 8.8e-05 22.3 0.0 2.0 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.15 gi|15669205|ref|NP_248010.1| - 8.5e-05 22.1 0.0 0.00016 21.2 0.0 1.4 1 0 0 1 1 1 1 PP-loop family ATP_bind_4 PF01902.12 gi|15669205|ref|NP_248010.1| - 0.0043 16.4 0.4 0.015 14.7 0.1 2.0 2 1 0 2 2 2 1 ATP-binding region NAD_synthase PF02540.12 gi|15669205|ref|NP_248010.1| - 0.01 14.7 0.1 0.03 13.2 0.0 1.8 2 1 0 2 2 2 0 NAD synthase YycC PF14174.1 gi|15669205|ref|NP_248010.1| - 0.036 13.7 0.0 1.5 8.5 0.0 3.0 3 0 0 3 3 3 0 YycC-like protein Exonuc_V_gamma PF04257.9 gi|15669205|ref|NP_248010.1| - 0.06 11.3 0.0 0.081 10.8 0.0 1.1 1 0 0 1 1 1 0 Exodeoxyribonuclease V, gamma subunit eIF_4G1 PF12152.3 gi|15669206|ref|NP_248011.1| - 0.019 14.8 0.7 0.042 13.7 0.5 1.5 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4G1 IncA PF04156.9 gi|15669206|ref|NP_248011.1| - 0.041 13.4 0.1 0.05 13.1 0.0 1.2 1 0 0 1 1 1 0 IncA protein DUF373 PF04123.8 gi|15669206|ref|NP_248011.1| - 0.14 11.1 4.0 0.21 10.5 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF4577 PF15145.1 gi|15669206|ref|NP_248011.1| - 6.1 6.7 6.6 12 5.8 4.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) 2-Hacid_dh_C PF02826.14 gi|15669207|ref|NP_248012.1| - 5.1e-70 234.2 0.1 5.2e-69 230.9 0.0 2.4 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|15669207|ref|NP_248012.1| - 2.2e-46 156.6 0.6 2.2e-46 156.6 0.4 1.9 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.20 gi|15669207|ref|NP_248012.1| - 2.2e-12 46.1 1.6 9.9e-11 40.8 0.0 3.3 3 0 0 3 3 3 1 ACT domain NAD_binding_2 PF03446.10 gi|15669207|ref|NP_248012.1| - 1.5e-10 41.1 1.7 4.8e-10 39.5 0.0 2.4 3 0 0 3 3 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_C PF03720.10 gi|15669207|ref|NP_248012.1| - 5.5e-05 23.2 0.1 0.0018 18.3 0.0 2.5 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.12 gi|15669207|ref|NP_248012.1| - 0.0001 22.6 4.4 0.00059 20.2 0.0 3.3 3 1 1 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.16 gi|15669207|ref|NP_248012.1| - 0.00014 21.7 1.9 0.012 15.4 0.1 2.4 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.7 gi|15669207|ref|NP_248012.1| - 0.00023 20.5 0.4 0.011 15.0 0.0 2.8 2 1 1 3 3 3 1 Acetohydroxy acid isomeroreductase, catalytic domain ACT_4 PF13291.1 gi|15669207|ref|NP_248012.1| - 0.00041 20.6 1.6 0.0028 17.9 0.0 2.9 3 0 0 3 3 3 1 ACT domain NAD_Gly3P_dh_N PF01210.18 gi|15669207|ref|NP_248012.1| - 0.011 15.4 0.6 0.54 9.9 0.0 2.8 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACT_5 PF13710.1 gi|15669207|ref|NP_248012.1| - 0.023 14.5 0.0 0.55 10.0 0.0 2.6 2 0 0 2 2 2 0 ACT domain Keratin_assoc PF09775.4 gi|15669207|ref|NP_248012.1| - 0.076 12.5 0.1 0.42 10.1 0.0 2.0 2 0 0 2 2 2 0 Keratinocyte-associated protein 2 Resolvase PF00239.16 gi|15669207|ref|NP_248012.1| - 0.11 12.3 0.1 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Resolvase, N terminal domain NAD_binding_7 PF13241.1 gi|15669207|ref|NP_248012.1| - 0.53 10.5 3.3 2 8.7 0.1 3.4 3 2 0 3 3 3 0 Putative NAD(P)-binding GATase PF00117.23 gi|15669208|ref|NP_248013.1| - 2.2e-49 167.5 0.0 3.2e-49 166.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.17 gi|15669208|ref|NP_248013.1| - 4e-47 158.9 0.1 6.6e-47 158.2 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.8 gi|15669208|ref|NP_248013.1| - 6.1e-09 35.6 0.3 7.7e-07 28.7 0.2 2.2 1 1 0 1 1 1 1 Peptidase C26 DUF3847 PF12958.2 gi|15669208|ref|NP_248013.1| - 0.023 14.4 0.2 0.088 12.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3847) HD PF01966.17 gi|15669209|ref|NP_248014.1| - 3.5e-10 39.9 1.0 6.1e-10 39.1 0.7 1.5 1 0 0 1 1 1 1 HD domain RecO_C PF02565.10 gi|15669209|ref|NP_248014.1| - 0.067 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Recombination protein O C terminal LEDGF PF11467.3 gi|15669210|ref|NP_248015.1| - 0.0069 16.0 1.7 0.013 15.2 1.2 1.7 1 1 0 1 1 1 1 Lens epithelium-derived growth factor (LEDGF) Use1 PF09753.4 gi|15669210|ref|NP_248015.1| - 0.01 15.2 3.2 0.01 15.2 2.2 1.8 2 0 0 2 2 2 0 Membrane fusion protein Use1 DASH_Dam1 PF08653.5 gi|15669210|ref|NP_248015.1| - 0.02 14.6 2.0 1.8 8.3 0.2 2.6 2 0 0 2 2 2 0 DASH complex subunit Dam1 IZUMO PF15005.1 gi|15669210|ref|NP_248015.1| - 0.053 13.5 4.1 0.068 13.2 2.4 1.5 1 1 0 1 1 1 0 Izumo sperm-egg fusion Pox_F16 PF04708.7 gi|15669210|ref|NP_248015.1| - 0.087 12.0 6.2 0.048 12.9 2.9 1.6 1 1 1 2 2 2 0 Poxvirus F16 protein Baculo_PEP_C PF04513.7 gi|15669210|ref|NP_248015.1| - 0.13 12.1 2.6 0.36 10.6 1.8 1.8 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus RRF_GI PF12614.3 gi|15669210|ref|NP_248015.1| - 0.14 11.9 2.8 0.15 11.8 0.9 1.8 1 1 0 2 2 2 0 Ribosome recycling factor Fzo_mitofusin PF04799.8 gi|15669210|ref|NP_248015.1| - 0.17 11.2 7.1 1.1 8.6 0.3 2.5 1 1 1 2 2 2 0 fzo-like conserved region PspB PF06667.7 gi|15669210|ref|NP_248015.1| - 0.19 11.7 4.2 5 7.1 0.4 2.7 2 0 0 2 2 2 0 Phage shock protein B PCRF PF03462.13 gi|15669210|ref|NP_248015.1| - 0.35 10.5 4.3 0.51 10.0 0.3 2.4 2 1 0 2 2 2 0 PCRF domain DASH_Dad3 PF08656.5 gi|15669210|ref|NP_248015.1| - 0.35 10.5 7.8 3.5 7.3 1.8 2.9 1 1 1 2 2 2 0 DASH complex subunit Dad3 NPV_P10 PF05531.7 gi|15669210|ref|NP_248015.1| - 0.36 11.1 5.9 29 5.0 4.1 2.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Prefoldin PF02996.12 gi|15669210|ref|NP_248015.1| - 0.68 9.5 9.4 2.6 7.7 3.1 2.8 2 1 0 2 2 2 0 Prefoldin subunit Occludin_ELL PF07303.8 gi|15669210|ref|NP_248015.1| - 0.77 10.5 7.3 3.7 8.3 0.4 2.4 2 0 0 2 2 2 0 Occludin homology domain DUF3782 PF12644.2 gi|15669210|ref|NP_248015.1| - 1.1 9.1 8.2 1.3e+02 2.4 5.7 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) Syntaxin-6_N PF09177.6 gi|15669210|ref|NP_248015.1| - 1.8 9.0 6.2 1.6 9.1 1.2 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal TFIIE_beta PF02186.10 gi|15669210|ref|NP_248015.1| - 2.8 7.9 6.1 3.9 7.5 0.2 3.0 1 1 2 3 3 3 0 TFIIE beta subunit core domain Prefoldin_2 PF01920.15 gi|15669210|ref|NP_248015.1| - 2.9 7.7 13.6 0.051 13.3 2.5 2.7 2 1 1 3 3 3 0 Prefoldin subunit HSCB_C PF07743.8 gi|15669210|ref|NP_248015.1| - 3.4 8.1 9.8 0.57 10.6 2.4 2.4 2 1 0 2 2 2 0 HSCB C-terminal oligomerisation domain IncA PF04156.9 gi|15669210|ref|NP_248015.1| - 4.6 6.8 12.0 3.1 7.3 0.6 2.5 2 1 0 2 2 2 0 IncA protein IATP PF04568.7 gi|15669210|ref|NP_248015.1| - 6 6.9 5.8 3.9 7.5 0.6 2.4 2 0 0 2 2 2 0 Mitochondrial ATPase inhibitor, IATP ING PF12998.2 gi|15669210|ref|NP_248015.1| - 8.4 6.7 10.7 6.2 7.1 0.0 3.3 3 1 0 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding Syntaxin PF00804.20 gi|15669210|ref|NP_248015.1| - 10 6.3 9.4 12 6.0 4.8 2.3 1 1 1 2 2 2 0 Syntaxin PUA PF01472.15 gi|15669211|ref|NP_248016.1| - 3.5e-13 49.0 0.0 8.4e-13 47.8 0.0 1.6 1 0 0 1 1 1 1 PUA domain TGT PF01702.13 gi|15669211|ref|NP_248016.1| - 3.1e-09 36.4 0.4 2.2e-06 27.1 0.0 2.7 2 1 1 3 3 3 2 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.1 gi|15669211|ref|NP_248016.1| - 1.6e-06 27.8 0.0 4.1e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase EcoEI_R_C PF08463.5 gi|15669211|ref|NP_248016.1| - 0.047 13.5 1.5 0.071 12.9 0.4 1.8 2 0 0 2 2 2 0 EcoEI R protein C-terminal ABC_tran PF00005.22 gi|15669212|ref|NP_248017.1| - 2.9e-23 82.6 0.0 6.2e-23 81.6 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669212|ref|NP_248017.1| - 6.7e-13 49.2 3.0 5.9e-09 36.2 0.3 2.3 1 1 1 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|15669212|ref|NP_248017.1| - 7.5e-05 23.1 7.2 0.00011 22.5 5.0 1.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|15669212|ref|NP_248017.1| - 0.014 14.6 0.8 3.1 6.9 0.0 2.7 2 1 1 3 3 3 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|15669212|ref|NP_248017.1| - 0.022 13.9 0.0 0.051 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SbcCD_C PF13558.1 gi|15669212|ref|NP_248017.1| - 0.027 14.3 0.0 0.082 12.8 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SRP54 PF00448.17 gi|15669212|ref|NP_248017.1| - 0.094 12.1 0.1 0.21 10.9 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.1 gi|15669212|ref|NP_248017.1| - 0.12 11.9 0.0 0.28 10.7 0.0 1.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|15669212|ref|NP_248017.1| - 0.12 11.8 0.0 0.28 10.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|15669212|ref|NP_248017.1| - 0.19 10.1 5.3 1.9 6.8 0.1 2.5 2 1 1 3 3 3 0 AAA domain ABC2_membrane_3 PF12698.2 gi|15669213|ref|NP_248018.1| - 3.6e-49 167.6 34.6 4.2e-49 167.4 24.0 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Erf4 PF10256.4 gi|15669213|ref|NP_248018.1| - 0.036 13.9 0.1 0.11 12.3 0.0 1.9 1 1 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family RAMP PF04901.8 gi|15669213|ref|NP_248018.1| - 0.089 12.5 1.4 3 7.6 0.0 3.1 2 1 1 3 3 3 0 Receptor activity modifying family SDH_alpha PF03313.10 gi|15669214|ref|NP_248019.1| - 4e-38 131.0 0.0 8.1e-38 130.0 0.0 1.4 1 1 0 1 1 1 1 Serine dehydratase alpha chain AAA_10 PF12846.2 gi|15669214|ref|NP_248019.1| - 0.088 12.2 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain ThiC PF01964.13 gi|161579523|ref|NP_248020.2| - 8.5e-201 666.9 1.9 9.6e-201 666.7 1.3 1.0 1 0 0 1 1 1 1 ThiC family tRNA_int_endo PF01974.12 gi|161579523|ref|NP_248020.2| - 0.025 14.3 0.0 0.84 9.4 0.0 2.6 2 0 0 2 2 2 0 tRNA intron endonuclease, catalytic C-terminal domain ADH_zinc_N PF00107.21 gi|161579523|ref|NP_248020.2| - 0.035 13.6 0.5 2.7 7.5 0.3 2.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Complex1_49kDa PF00346.14 gi|15669216|ref|NP_248021.1| - 1e-27 96.8 0.0 4.4e-22 78.3 0.0 2.3 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|15669216|ref|NP_248021.1| - 4.2e-14 52.2 2.5 1.9e-13 50.0 0.1 2.5 2 1 1 3 3 3 1 Nickel-dependent hydrogenase Topo-VIb_trans PF09239.6 gi|15669217|ref|NP_248022.1| - 3.9e-62 208.5 0.0 9.6e-62 207.2 0.0 1.6 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|15669217|ref|NP_248022.1| - 1.9e-14 53.3 0.9 4e-14 52.2 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|15669217|ref|NP_248022.1| - 1.4e-10 40.9 0.0 3.1e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Med29 PF11568.3 gi|15669217|ref|NP_248022.1| - 0.0068 16.4 0.4 0.014 15.4 0.3 1.5 1 0 0 1 1 1 1 Mediator complex subunit 29 Costars PF14705.1 gi|15669217|ref|NP_248022.1| - 0.0088 16.0 0.4 0.065 13.2 0.0 2.7 2 1 0 2 2 2 1 Costars DUF365 PF04033.7 gi|15669217|ref|NP_248022.1| - 0.046 13.7 7.8 0.65 10.0 0.2 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF365) DUF2458 PF10454.4 gi|15669217|ref|NP_248022.1| - 7.1 6.5 10.2 0.32 10.8 1.7 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2458) RrnaAD PF00398.15 gi|15669218|ref|NP_248023.1| - 1.5e-56 191.3 1.1 1.8e-56 191.1 0.8 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|15669218|ref|NP_248023.1| - 2.6e-06 27.4 0.0 3.6e-06 27.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669218|ref|NP_248023.1| - 5.7e-06 26.0 2.3 4e-05 23.2 1.6 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669218|ref|NP_248023.1| - 0.00011 21.9 0.0 0.00016 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15669218|ref|NP_248023.1| - 0.0002 20.7 0.0 0.0004 19.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|15669218|ref|NP_248023.1| - 0.00024 21.6 0.0 0.00039 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|15669218|ref|NP_248023.1| - 0.00047 19.2 1.8 0.0005 19.1 0.1 1.8 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_11 PF08241.7 gi|15669218|ref|NP_248023.1| - 0.00069 20.0 0.0 0.0079 16.6 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain DOT1 PF08123.8 gi|15669218|ref|NP_248023.1| - 0.0048 16.2 0.0 0.011 15.0 0.0 1.5 1 0 0 1 1 1 1 Histone methylation protein DOT1 NodS PF05401.6 gi|15669218|ref|NP_248023.1| - 0.0069 15.7 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_25 PF13649.1 gi|15669218|ref|NP_248023.1| - 0.015 15.6 0.0 0.039 14.3 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.1 gi|15669218|ref|NP_248023.1| - 0.021 14.5 0.3 0.084 12.5 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain DREV PF05219.7 gi|15669218|ref|NP_248023.1| - 0.029 13.2 0.0 0.059 12.2 0.0 1.5 1 0 0 1 1 1 0 DREV methyltransferase PCMT PF01135.14 gi|15669218|ref|NP_248023.1| - 0.043 13.3 0.0 0.08 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_17 PF12692.2 gi|15669218|ref|NP_248023.1| - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase DUF3782 PF12644.2 gi|15669218|ref|NP_248023.1| - 0.11 12.3 0.1 0.18 11.5 0.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) CTP_transf_2 PF01467.21 gi|15669219|ref|NP_248024.1| - 8.3e-20 71.4 0.1 1.2e-19 70.9 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|15669219|ref|NP_248024.1| - 0.0029 17.2 1.0 0.01 15.4 0.7 1.9 1 1 0 1 1 1 1 FAD synthetase IF3_C PF00707.17 gi|15669219|ref|NP_248024.1| - 0.027 14.2 1.1 0.042 13.5 0.8 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain PTS_IIB PF02302.12 gi|15669219|ref|NP_248024.1| - 0.037 14.5 1.2 0.054 13.9 0.7 1.4 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit DUF2099 PF09872.4 gi|15669219|ref|NP_248024.1| - 0.082 11.9 0.3 0.098 11.6 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2099) Mem_trans PF03547.13 gi|15669220|ref|NP_248025.1| - 7.4e-66 222.0 31.5 7.5e-36 123.2 5.3 2.0 1 1 1 2 2 2 2 Membrane transport protein DUF373 PF04123.8 gi|15669221|ref|NP_248026.1| - 3.4e-101 338.7 15.2 3.9e-101 338.5 10.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) ODV-E18 PF10717.4 gi|15669221|ref|NP_248026.1| - 0.21 11.0 6.5 0.22 11.0 1.3 2.3 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF2663 PF10864.3 gi|15669221|ref|NP_248026.1| - 0.45 10.7 13.5 2.1 8.5 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2663) Selenoprotein_S PF06936.6 gi|15669221|ref|NP_248026.1| - 1.1 8.8 2.8 1.2 8.6 0.1 2.2 2 1 0 2 2 2 0 Selenoprotein S (SelS) CorA PF01544.13 gi|15669222|ref|NP_248027.1| - 5.1e-76 255.5 9.8 6.3e-76 255.1 6.8 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein SRP19 PF01922.12 gi|15669223|ref|NP_248028.1| - 2e-27 95.5 0.6 2.2e-27 95.4 0.4 1.0 1 0 0 1 1 1 1 SRP19 protein LAGLIDADG_3 PF14528.1 gi|15669223|ref|NP_248028.1| - 0.00048 20.3 0.4 0.012 15.7 0.1 2.1 1 1 1 2 2 2 1 LAGLIDADG-like domain MTD PF01993.13 gi|15669224|ref|NP_248029.1| - 2.5e-160 531.8 12.2 2.8e-160 531.7 8.5 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Bac_DNA_binding PF00216.16 gi|15669224|ref|NP_248029.1| - 0.0061 16.5 0.3 0.018 15.0 0.1 1.8 2 0 0 2 2 2 1 Bacterial DNA-binding protein DUF1492 PF07374.6 gi|15669224|ref|NP_248029.1| - 0.15 12.2 0.5 0.42 10.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1492) Zip PF02535.17 gi|15669225|ref|NP_248030.1| - 4.4e-24 85.0 20.8 1.2e-22 80.3 3.4 2.2 1 1 1 2 2 2 2 ZIP Zinc transporter MFS_1 PF07690.11 gi|15669225|ref|NP_248030.1| - 4.3 5.9 21.5 1.4 7.5 5.3 2.1 2 0 0 2 2 2 0 Major Facilitator Superfamily DUF872 PF05915.7 gi|15669225|ref|NP_248030.1| - 7 6.5 10.9 8 6.3 3.5 2.3 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) PALP PF00291.20 gi|15669226|ref|NP_248031.1| - 1.2e-45 156.0 0.3 1.7e-45 155.5 0.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.15 gi|15669227|ref|NP_248032.1| - 8.3e-97 322.7 0.8 9.7e-97 322.5 0.6 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|15669227|ref|NP_248032.1| - 9.4e-07 28.3 0.3 5.3e-06 25.8 0.2 2.0 1 1 1 2 2 2 1 Histidine biosynthesis protein BtpA PF03437.10 gi|15669227|ref|NP_248032.1| - 0.0001 21.6 0.1 0.0002 20.6 0.0 1.6 2 0 0 2 2 2 1 BtpA family PcrB PF01884.12 gi|15669227|ref|NP_248032.1| - 0.00011 21.5 2.6 0.00044 19.5 0.9 2.2 2 0 0 2 2 2 1 PcrB family PHP PF02811.14 gi|15669227|ref|NP_248032.1| - 0.018 14.8 0.2 0.12 12.1 0.1 2.2 1 1 0 1 1 1 0 PHP domain Ribul_P_3_epim PF00834.14 gi|15669227|ref|NP_248032.1| - 0.021 13.9 0.2 0.051 12.6 0.1 1.7 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family Response_reg PF00072.19 gi|15669227|ref|NP_248032.1| - 0.096 12.6 0.0 0.39 10.7 0.0 2.2 1 1 0 1 1 1 0 Response regulator receiver domain PucR PF07905.6 gi|15669227|ref|NP_248032.1| - 0.098 12.2 0.0 0.47 10.0 0.0 2.1 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family P4Ha_N PF08336.6 gi|15669227|ref|NP_248032.1| - 0.18 11.6 0.8 6.1 6.6 0.0 2.6 2 0 0 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region RNA_pol_Rpb5_C PF01191.14 gi|15669228|ref|NP_248033.1| - 9.8e-32 108.3 2.2 1.1e-31 108.2 1.5 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain MinC_N PF05209.8 gi|15669228|ref|NP_248033.1| - 0.016 14.9 0.1 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 Septum formation inhibitor MinC, N-terminal domain RNA_pol_Rpb2_1 PF04563.10 gi|15669229|ref|NP_248034.1| - 1.2e-59 200.7 0.0 1.4e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.9 gi|15669229|ref|NP_248034.1| - 1.6e-26 92.9 0.0 2.4e-26 92.3 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.11 gi|15669229|ref|NP_248034.1| - 4.7e-24 83.9 0.0 8e-24 83.1 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_6 PF00562.23 gi|15669230|ref|NP_248035.1| - 6.7e-129 430.0 0.0 9.3e-129 429.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_4 PF04566.8 gi|15669230|ref|NP_248035.1| - 1.1e-27 95.5 0.3 2.7e-27 94.3 0.2 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_7 PF04560.15 gi|15669230|ref|NP_248035.1| - 8.5e-27 93.2 0.0 1.9e-26 92.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_5 PF04567.12 gi|15669230|ref|NP_248035.1| - 3.6e-17 62.0 2.4 8.7e-17 60.8 1.7 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_45 PF10385.4 gi|15669230|ref|NP_248035.1| - 0.0088 15.8 0.1 0.031 14.0 0.1 1.9 1 0 0 1 1 1 1 RNA polymerase beta subunit external 1 domain TF_Zn_Ribbon PF08271.7 gi|15669230|ref|NP_248035.1| - 0.036 13.3 1.9 0.079 12.3 1.3 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding ActA PF05058.7 gi|15669230|ref|NP_248035.1| - 0.1 10.5 0.2 0.13 10.1 0.1 1.1 1 0 0 1 1 1 0 ActA Protein Auto_anti-p27 PF06677.7 gi|15669230|ref|NP_248035.1| - 1.2 8.9 4.6 2.9 7.7 3.2 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-tcix PF14952.1 gi|15669230|ref|NP_248035.1| - 4 6.8 5.0 0.67 9.3 0.1 2.0 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding RNA_pol_Rpb1_1 PF04997.7 gi|15669231|ref|NP_248036.1| - 5.7e-94 315.1 4.8 5.7e-93 311.8 0.1 3.2 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|15669231|ref|NP_248036.1| - 1.9e-61 206.8 0.3 1.1e-43 149.0 0.0 3.5 3 0 0 3 3 3 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.13 gi|15669231|ref|NP_248036.1| - 1.1e-36 125.9 0.6 2.3e-35 121.6 0.0 2.9 3 0 0 3 3 3 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.12 gi|15669231|ref|NP_248036.1| - 1.4e-32 111.6 0.0 3.9e-32 110.1 0.0 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.12 gi|15669231|ref|NP_248036.1| - 2.8e-29 102.2 0.1 2.8e-29 102.2 0.0 2.5 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 5 Intein_splicing PF14890.1 gi|15669231|ref|NP_248036.1| - 2.9e-15 56.0 8.6 2.2e-13 49.8 6.0 2.6 1 1 0 1 1 1 1 Intein splicing domain LAGLIDADG_3 PF14528.1 gi|15669231|ref|NP_248036.1| - 0.00017 21.7 0.9 0.00017 21.7 0.6 3.6 3 0 0 3 3 3 1 LAGLIDADG-like domain zf-ribbon_3 PF13248.1 gi|15669231|ref|NP_248036.1| - 0.0065 15.6 0.2 5 6.4 0.0 2.9 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15669231|ref|NP_248036.1| - 0.051 13.0 1.6 11 5.6 0.1 3.1 2 0 0 2 2 2 0 zinc-ribbon domain RNA_pol_Rpb1_5 PF04998.12 gi|15669232|ref|NP_248037.1| - 1.4e-49 168.8 1.6 1.3e-37 129.5 0.6 2.6 2 0 0 2 2 2 2 RNA polymerase Rpb1, domain 5 LAGLIDADG_3 PF14528.1 gi|15669232|ref|NP_248037.1| - 1.1e-20 73.6 7.6 1.1e-16 60.8 0.2 3.4 3 0 0 3 3 3 2 LAGLIDADG-like domain Intein_splicing PF14890.1 gi|15669232|ref|NP_248037.1| - 2.8e-12 46.1 7.0 2.8e-12 46.1 4.9 3.0 2 1 0 2 2 2 1 Intein splicing domain Hom_end PF05204.9 gi|15669232|ref|NP_248037.1| - 7.5e-05 22.6 1.5 0.48 10.4 0.0 3.6 2 1 1 3 3 3 2 Homing endonuclease LAGLIDADG_WhiA PF14527.1 gi|15669232|ref|NP_248037.1| - 0.00077 19.2 0.7 0.83 9.5 0.1 3.3 2 1 0 2 2 2 2 WhiA LAGLIDADG-like domain LsmAD PF06741.8 gi|15669232|ref|NP_248037.1| - 0.096 12.7 2.0 0.16 12.0 0.2 2.3 2 0 0 2 2 2 0 LsmAD domain Bac_DNA_binding PF00216.16 gi|15669232|ref|NP_248037.1| - 1.8 8.6 7.9 1.2 9.2 0.1 3.9 5 0 0 5 5 5 0 Bacterial DNA-binding protein Ribosomal_L7Ae PF01248.21 gi|15669233|ref|NP_248038.1| - 3.9e-22 77.5 0.1 4.4e-22 77.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KH_5 PF13184.1 gi|15669234|ref|NP_248039.1| - 2.3e-16 59.3 3.8 2.6e-16 59.1 0.1 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_2 PF07650.12 gi|15669234|ref|NP_248039.1| - 1.8e-14 53.0 9.4 7.1e-14 51.1 0.2 2.4 1 1 1 2 2 2 2 KH domain KH_1 PF00013.24 gi|15669234|ref|NP_248039.1| - 1e-06 28.2 5.5 8.5e-05 22.1 0.1 2.6 2 1 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|15669234|ref|NP_248039.1| - 0.038 13.6 0.5 0.14 11.8 0.0 2.1 2 0 0 2 2 2 0 KH domain KH_4 PF13083.1 gi|15669234|ref|NP_248039.1| - 0.039 13.5 1.5 0.81 9.3 0.1 2.6 2 0 0 2 2 2 0 KH domain Ribosom_S12_S23 PF00164.20 gi|15669235|ref|NP_248040.1| - 2.6e-40 136.6 0.4 3e-40 136.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.16 gi|15669236|ref|NP_248041.1| - 2e-42 144.2 6.0 2.3e-42 144.0 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e GTP_EFTU PF00009.22 gi|15669237|ref|NP_248042.1| - 1.1e-61 207.5 0.0 1.9e-61 206.7 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|15669237|ref|NP_248042.1| - 8.9e-33 112.4 0.1 2.1e-32 111.2 0.1 1.7 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_C PF00679.19 gi|15669237|ref|NP_248042.1| - 9.6e-27 92.6 0.1 4.8e-26 90.4 0.0 2.3 3 0 0 3 3 3 1 Elongation factor G C-terminus EFG_II PF14492.1 gi|15669237|ref|NP_248042.1| - 1.6e-23 82.3 0.4 4.1e-23 81.0 0.3 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.20 gi|15669237|ref|NP_248042.1| - 6.4e-16 58.2 0.2 3.2e-15 55.9 0.0 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 DUF552 PF04472.7 gi|15669238|ref|NP_248043.1| - 0.017 15.0 0.1 0.042 13.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF552) AAA_18 PF13238.1 gi|15669239|ref|NP_248044.1| - 4.4e-28 98.1 2.8 4.4e-28 98.1 2.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15669239|ref|NP_248044.1| - 7.1e-18 65.5 4.2 1.7e-17 64.3 2.6 1.8 1 1 1 2 2 2 1 AAA domain SKI PF01202.17 gi|15669239|ref|NP_248044.1| - 1.3e-07 31.6 0.8 1.9e-06 27.8 0.5 2.1 1 1 0 1 1 1 1 Shikimate kinase AAA_28 PF13521.1 gi|15669239|ref|NP_248044.1| - 6.4e-07 29.4 0.0 1.3e-06 28.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|15669239|ref|NP_248044.1| - 3.6e-06 26.8 0.0 0.0011 18.9 0.0 2.8 1 1 1 2 2 2 1 AAA domain Thymidylate_kin PF02223.12 gi|15669239|ref|NP_248044.1| - 1.6e-05 24.3 5.1 0.0053 16.1 0.0 3.0 1 1 2 3 3 3 1 Thymidylate kinase AAA PF00004.24 gi|15669239|ref|NP_248044.1| - 2e-05 24.7 0.3 0.00011 22.4 0.1 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Cytidylate_kin2 PF13189.1 gi|15669239|ref|NP_248044.1| - 5.4e-05 23.1 1.9 0.00021 21.2 0.6 2.2 1 1 1 2 2 2 1 Cytidylate kinase-like family CoaE PF01121.15 gi|15669239|ref|NP_248044.1| - 0.00046 19.6 0.1 0.0011 18.4 0.0 1.7 2 0 0 2 2 1 1 Dephospho-CoA kinase KTI12 PF08433.5 gi|15669239|ref|NP_248044.1| - 0.00069 18.9 0.1 0.0041 16.3 0.0 1.9 2 0 0 2 2 2 1 Chromatin associated protein KTI12 NTPase_1 PF03266.10 gi|15669239|ref|NP_248044.1| - 0.0016 18.1 9.9 0.013 15.1 1.4 3.2 2 1 1 3 3 3 1 NTPase AAA_14 PF13173.1 gi|15669239|ref|NP_248044.1| - 0.0023 17.8 0.9 0.0023 17.8 0.6 2.0 1 1 1 2 2 2 1 AAA domain RuvB_N PF05496.7 gi|15669239|ref|NP_248044.1| - 0.0024 16.9 0.0 0.0044 16.1 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Viral_helicase1 PF01443.13 gi|15669239|ref|NP_248044.1| - 0.0046 16.5 0.1 0.011 15.2 0.0 1.6 1 1 1 2 2 2 1 Viral (Superfamily 1) RNA helicase KaiC PF06745.8 gi|15669239|ref|NP_248044.1| - 0.006 15.7 7.9 7.4 5.6 5.5 2.5 1 1 0 1 1 1 0 KaiC AAA_22 PF13401.1 gi|15669239|ref|NP_248044.1| - 0.0069 16.5 0.4 0.017 15.2 0.3 2.0 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.10 gi|15669239|ref|NP_248044.1| - 0.0077 14.9 0.0 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AMP-binding_C_2 PF14535.1 gi|15669239|ref|NP_248044.1| - 0.012 15.6 3.0 0.015 15.3 0.8 2.1 1 1 1 2 2 2 0 AMP-binding enzyme C-terminal domain ADK PF00406.17 gi|15669239|ref|NP_248044.1| - 0.012 15.5 1.0 2 8.2 0.7 2.4 1 1 0 1 1 1 0 Adenylate kinase RNA_helicase PF00910.17 gi|15669239|ref|NP_248044.1| - 0.013 15.6 0.0 0.034 14.3 0.0 1.7 2 0 0 2 2 1 0 RNA helicase dNK PF01712.14 gi|15669239|ref|NP_248044.1| - 0.014 15.3 2.2 0.014 15.3 1.5 2.2 1 1 1 2 2 2 0 Deoxynucleoside kinase AAA_19 PF13245.1 gi|15669239|ref|NP_248044.1| - 0.015 15.0 0.0 0.043 13.5 0.0 1.8 2 0 0 2 2 1 0 Part of AAA domain MazG-like PF12643.2 gi|15669239|ref|NP_248044.1| - 0.015 15.2 4.3 0.098 12.6 0.6 2.3 2 0 0 2 2 2 0 MazG-like family DUF258 PF03193.11 gi|15669239|ref|NP_248044.1| - 0.017 14.3 0.0 0.033 13.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 PRK PF00485.13 gi|15669239|ref|NP_248044.1| - 0.021 14.3 0.1 0.075 12.5 0.1 2.0 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.7 gi|15669239|ref|NP_248044.1| - 0.025 13.6 0.6 0.083 11.9 0.1 2.1 2 1 0 2 2 2 0 Zeta toxin AAA_21 PF13304.1 gi|15669239|ref|NP_248044.1| - 0.052 13.5 1.0 0.075 12.9 0.7 1.5 1 1 0 1 1 1 0 AAA domain Kinase-PPPase PF03618.9 gi|15669239|ref|NP_248044.1| - 0.058 12.8 1.5 5 6.5 0.2 2.1 1 1 1 2 2 2 0 Kinase/pyrophosphorylase Seryl_tRNA_N PF02403.17 gi|15669239|ref|NP_248044.1| - 0.064 13.2 7.8 0.25 11.3 0.0 3.0 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain ABC_tran PF00005.22 gi|15669239|ref|NP_248044.1| - 0.078 13.2 0.4 0.11 12.7 0.3 1.7 1 1 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.18 gi|15669239|ref|NP_248044.1| - 0.078 12.9 2.4 0.35 10.8 1.7 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.1 gi|15669239|ref|NP_248044.1| - 0.083 12.8 0.1 0.092 12.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain ArgK PF03308.11 gi|15669239|ref|NP_248044.1| - 0.099 11.4 0.8 0.16 10.6 0.1 1.7 2 0 0 2 2 2 0 ArgK protein NanE PF04131.9 gi|15669239|ref|NP_248044.1| - 0.12 11.3 0.9 0.18 10.7 0.2 1.6 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase AAA_5 PF07728.9 gi|15669239|ref|NP_248044.1| - 0.24 11.1 1.7 0.5 10.0 0.2 2.3 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) PTPS PF01242.14 gi|15669239|ref|NP_248044.1| - 0.24 11.1 2.0 0.91 9.2 1.4 2.0 1 1 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase AAA_24 PF13479.1 gi|15669239|ref|NP_248044.1| - 0.29 10.6 4.5 0.099 12.2 1.1 1.7 2 1 0 2 2 2 0 AAA domain Fe-S_assembly PF04384.8 gi|15669239|ref|NP_248044.1| - 0.41 11.0 3.0 4.8 7.6 0.2 2.9 3 0 0 3 3 3 0 Iron-sulphur cluster assembly Chordopox_L2 PF05803.7 gi|15669239|ref|NP_248044.1| - 1.1 8.8 3.5 4 7.1 0.3 2.3 2 1 0 2 2 2 0 Chordopoxvirus L2 protein MobB PF03205.9 gi|15669239|ref|NP_248044.1| - 2.6 7.7 5.3 2.2 7.9 1.7 2.3 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|15669239|ref|NP_248044.1| - 10 5.4 8.4 1.6e+02 1.5 5.8 2.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain CmcH_NodU PF02543.10 gi|15669240|ref|NP_248045.1| - 4e-115 384.7 0.0 5e-115 384.4 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase Peptidase_M22 PF00814.20 gi|15669240|ref|NP_248045.1| - 2.4e-05 23.9 0.0 3.8e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Glycoprotease family KH_5 PF13184.1 gi|15669240|ref|NP_248045.1| - 0.083 12.7 2.1 0.16 11.8 0.5 2.2 2 0 0 2 2 2 0 NusA-like KH domain Sua5_yciO_yrdC PF01300.13 gi|15669240|ref|NP_248045.1| - 0.13 11.4 0.0 0.27 10.4 0.0 1.5 1 0 0 1 1 1 0 Telomere recombination DUF77 PF01910.12 gi|15669241|ref|NP_248046.1| - 1.7e-29 101.3 0.3 1.9e-29 101.1 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF77 Ykof PF07615.6 gi|15669241|ref|NP_248046.1| - 2.7e-05 24.2 0.0 3.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 YKOF-related Family DUF3510 PF12022.3 gi|15669241|ref|NP_248046.1| - 9.2e-05 22.5 0.2 0.00012 22.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3510) RuvA_C PF07499.8 gi|15669241|ref|NP_248046.1| - 0.14 12.3 0.6 1.4 9.1 0.0 2.3 3 0 0 3 3 3 0 RuvA, C-terminal domain HTH_38 PF13936.1 gi|15669242|ref|NP_248047.1| - 8.6e-07 28.4 0.2 8.6e-07 28.4 0.1 2.4 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|15669242|ref|NP_248047.1| - 6.2e-06 25.6 0.1 1.4e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.7 gi|15669242|ref|NP_248047.1| - 0.00016 21.2 2.0 0.00083 18.9 0.0 2.5 2 1 0 2 2 2 1 HTH domain Sigma70_r4_2 PF08281.7 gi|15669242|ref|NP_248047.1| - 0.00033 20.0 0.6 0.0009 18.6 0.0 2.0 2 1 1 3 3 1 1 Sigma-70, region 4 HTH_40 PF14493.1 gi|15669242|ref|NP_248047.1| - 0.00049 20.2 11.3 0.034 14.3 7.4 2.9 1 1 1 2 2 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|15669242|ref|NP_248047.1| - 0.0011 19.1 0.7 0.0019 18.3 0.4 1.4 1 1 0 1 1 1 1 Winged helix-turn helix Terminase_5 PF06056.7 gi|15669242|ref|NP_248047.1| - 0.002 17.6 0.0 0.0062 16.0 0.0 1.8 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) FlaC_arch PF05377.6 gi|15669242|ref|NP_248047.1| - 0.0022 17.8 11.4 0.013 15.3 6.3 2.8 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) GerE PF00196.14 gi|15669242|ref|NP_248047.1| - 0.0023 17.2 0.2 0.0057 15.9 0.0 1.7 2 0 0 2 2 1 1 Bacterial regulatory proteins, luxR family HTH_19 PF12844.2 gi|15669242|ref|NP_248047.1| - 0.0024 17.8 0.9 0.0024 17.8 0.6 2.6 1 1 1 2 2 2 1 Helix-turn-helix domain KorB PF08535.5 gi|15669242|ref|NP_248047.1| - 0.0032 17.6 2.2 0.13 12.4 1.1 2.4 1 1 0 1 1 1 1 KorB domain Sigma70_r4 PF04545.11 gi|15669242|ref|NP_248047.1| - 0.0041 16.4 0.2 0.012 14.8 0.1 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 NYD-SP28_assoc PF14775.1 gi|15669242|ref|NP_248047.1| - 0.0043 16.7 1.9 0.011 15.4 1.3 1.7 1 0 0 1 1 1 1 Sperm tail C-terminal domain HTH_20 PF12840.2 gi|15669242|ref|NP_248047.1| - 0.0059 16.3 0.0 0.014 15.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Mto2_bdg PF12808.2 gi|15669242|ref|NP_248047.1| - 0.0063 16.5 3.6 0.015 15.3 2.5 1.7 1 0 0 1 1 1 1 Micro-tubular organiser Mto1 C-term Mto2-binding region HTH_24 PF13412.1 gi|15669242|ref|NP_248047.1| - 0.0068 15.7 0.0 0.0068 15.7 0.0 2.3 3 0 0 3 3 1 1 Winged helix-turn-helix DNA-binding CCDC92 PF14916.1 gi|15669242|ref|NP_248047.1| - 0.0084 15.6 4.0 0.017 14.6 2.7 1.5 1 0 0 1 1 1 1 Coiled-coil domain of unknown function HTH_3 PF01381.17 gi|15669242|ref|NP_248047.1| - 0.0094 15.7 0.3 0.0094 15.7 0.2 2.7 2 0 0 2 2 2 1 Helix-turn-helix Cluap1 PF10234.4 gi|15669242|ref|NP_248047.1| - 0.011 14.9 10.3 0.013 14.6 7.2 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 HTH_31 PF13560.1 gi|15669242|ref|NP_248047.1| - 0.013 15.6 0.2 0.029 14.5 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.1 gi|15669242|ref|NP_248047.1| - 0.019 14.9 0.1 0.048 13.6 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_17 PF12728.2 gi|15669242|ref|NP_248047.1| - 0.021 15.0 0.6 0.41 10.9 0.4 2.8 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.7 gi|15669242|ref|NP_248047.1| - 0.022 14.2 0.9 0.051 13.1 0.1 2.1 3 0 0 3 3 1 0 DeoR-like helix-turn-helix domain HALZ PF02183.13 gi|15669242|ref|NP_248047.1| - 0.025 14.3 8.1 0.076 12.7 5.6 1.8 1 0 0 1 1 1 0 Homeobox associated leucine zipper APG6 PF04111.7 gi|15669242|ref|NP_248047.1| - 0.025 13.6 11.4 0.033 13.2 7.9 1.3 1 0 0 1 1 1 0 Autophagy protein Apg6 DivIC PF04977.10 gi|15669242|ref|NP_248047.1| - 0.027 13.9 5.8 0.027 13.9 4.0 2.6 2 1 0 2 2 2 0 Septum formation initiator DUF148 PF02520.12 gi|15669242|ref|NP_248047.1| - 0.027 14.2 4.9 0.047 13.4 3.4 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF148 EAP30 PF04157.11 gi|15669242|ref|NP_248047.1| - 0.027 13.6 4.6 0.49 9.5 0.0 2.1 2 0 0 2 2 2 0 EAP30/Vps36 family AAA_23 PF13476.1 gi|15669242|ref|NP_248047.1| - 0.029 14.7 10.4 0.034 14.4 7.2 1.2 1 0 0 1 1 1 0 AAA domain Myb_DNA-bind_6 PF13921.1 gi|15669242|ref|NP_248047.1| - 0.034 14.2 0.8 0.15 12.1 0.0 2.2 1 1 1 2 2 2 0 Myb-like DNA-binding domain TrmB PF01978.14 gi|15669242|ref|NP_248047.1| - 0.034 13.8 4.2 0.2 11.4 0.0 3.0 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB bZIP_1 PF00170.16 gi|15669242|ref|NP_248047.1| - 0.037 13.9 12.4 0.11 12.4 8.6 1.9 1 0 0 1 1 1 0 bZIP transcription factor LXG PF04740.7 gi|15669242|ref|NP_248047.1| - 0.038 13.7 3.6 0.038 13.7 2.5 1.9 2 0 0 2 2 2 0 LXG domain of WXG superfamily HTH_Tnp_1 PF01527.15 gi|15669242|ref|NP_248047.1| - 0.045 13.7 3.1 0.28 11.1 2.1 2.1 1 1 0 1 1 1 0 Transposase DUF2316 PF10078.4 gi|15669242|ref|NP_248047.1| - 0.052 13.5 3.7 1.4 8.9 0.0 2.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2316) HTH_10 PF04967.7 gi|15669242|ref|NP_248047.1| - 0.055 13.0 0.8 0.19 11.3 0.0 2.1 2 0 0 2 2 2 0 HTH DNA binding domain TPR_MLP1_2 PF07926.7 gi|15669242|ref|NP_248047.1| - 0.068 12.9 11.7 0.097 12.4 8.1 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Sigma70_ECF PF07638.6 gi|15669242|ref|NP_248047.1| - 0.073 12.7 4.4 0.38 10.3 0.0 2.2 1 1 1 2 2 2 0 ECF sigma factor MarR_2 PF12802.2 gi|15669242|ref|NP_248047.1| - 0.077 12.6 0.1 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 MarR family Phage_terminase PF10668.4 gi|15669242|ref|NP_248047.1| - 0.089 12.5 0.3 0.23 11.2 0.0 1.8 2 0 0 2 2 1 0 Phage terminase small subunit Hemerythrin PF01814.18 gi|15669242|ref|NP_248047.1| - 0.1 12.7 7.1 0.86 9.7 2.6 2.2 1 1 1 2 2 2 0 Hemerythrin HHE cation binding domain Tho2 PF11262.3 gi|15669242|ref|NP_248047.1| - 0.11 11.5 6.4 0.17 10.9 4.4 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ADIP PF11559.3 gi|15669242|ref|NP_248047.1| - 0.11 12.3 8.4 0.19 11.6 5.7 1.5 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Prominin PF05478.6 gi|15669242|ref|NP_248047.1| - 0.12 9.9 1.3 0.13 9.7 0.9 1.2 1 0 0 1 1 1 0 Prominin LexA_DNA_bind PF01726.11 gi|15669242|ref|NP_248047.1| - 0.13 11.8 0.5 1.9 8.0 0.1 2.5 1 1 1 2 2 2 0 LexA DNA binding domain Herpes_UL6 PF01763.11 gi|15669242|ref|NP_248047.1| - 0.15 10.2 6.0 0.17 10.0 4.2 1.2 1 1 0 1 1 1 0 Herpesvirus UL6 like DUF4164 PF13747.1 gi|15669242|ref|NP_248047.1| - 0.16 12.1 11.1 0.52 10.4 4.9 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4164) Nup88 PF10168.4 gi|15669242|ref|NP_248047.1| - 0.16 9.7 12.3 0.19 9.5 8.5 1.1 1 0 0 1 1 1 0 Nuclear pore component DUF2390 PF09523.5 gi|15669242|ref|NP_248047.1| - 0.16 12.1 0.2 0.16 12.1 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2390) DUF2681 PF10883.3 gi|15669242|ref|NP_248047.1| - 0.17 12.1 5.0 0.36 11.0 3.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) CDC37_N PF03234.9 gi|15669242|ref|NP_248047.1| - 0.17 12.1 6.2 0.21 11.8 4.3 1.2 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding NPV_P10 PF05531.7 gi|15669242|ref|NP_248047.1| - 0.19 12.0 1.5 2.9 8.2 1.2 2.4 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF619 PF04768.8 gi|15669242|ref|NP_248047.1| - 0.22 10.9 1.2 0.42 10.0 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF619) COG2 PF06148.6 gi|15669242|ref|NP_248047.1| - 0.24 11.2 6.2 6.2 6.7 1.9 2.2 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DrrA_P4M PF14860.1 gi|15669242|ref|NP_248047.1| - 0.24 11.1 11.0 5.7 6.7 7.0 2.5 1 1 1 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain DivIVA PF05103.8 gi|15669242|ref|NP_248047.1| - 0.29 11.1 14.0 0.29 11.1 7.7 2.2 1 1 1 2 2 2 0 DivIVA protein DUF550 PF04447.7 gi|15669242|ref|NP_248047.1| - 0.36 10.4 3.7 2.2 7.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF550) P4Ha_N PF08336.6 gi|15669242|ref|NP_248047.1| - 0.41 10.4 8.1 0.84 9.4 0.2 2.2 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DNA_topoisoIV PF00521.15 gi|15669242|ref|NP_248047.1| - 0.42 9.3 7.9 0.41 9.4 5.5 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A HTH_27 PF13463.1 gi|15669242|ref|NP_248047.1| - 0.43 10.9 2.0 0.55 10.5 0.2 2.1 2 1 0 2 2 1 0 Winged helix DNA-binding domain Ax_dynein_light PF10211.4 gi|15669242|ref|NP_248047.1| - 0.65 9.8 12.0 0.93 9.2 8.3 1.4 1 0 0 1 1 1 0 Axonemal dynein light chain DUF2175 PF09943.4 gi|15669242|ref|NP_248047.1| - 0.76 9.8 11.5 0.49 10.4 6.1 2.1 2 1 1 3 3 2 0 Uncharacterized protein conserved in archaea (DUF2175) tRNA-synt_His PF13393.1 gi|15669242|ref|NP_248047.1| - 0.77 8.7 4.5 0.97 8.4 3.0 1.3 1 1 0 1 1 1 0 Histidyl-tRNA synthetase COG5 PF10392.4 gi|15669242|ref|NP_248047.1| - 0.79 9.6 5.2 1.9 8.4 2.9 2.0 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Med30 PF11315.3 gi|15669242|ref|NP_248047.1| - 0.85 9.7 8.6 1.2 9.2 5.9 1.3 1 0 0 1 1 1 0 Mediator complex subunit 30 Bacillus_HBL PF05791.6 gi|15669242|ref|NP_248047.1| - 1.3 8.3 6.9 1.3 8.3 3.6 1.8 1 1 0 2 2 1 0 Bacillus haemolytic enterotoxin (HBL) Atg14 PF10186.4 gi|15669242|ref|NP_248047.1| - 1.3 7.8 7.4 1.6 7.6 5.1 1.1 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Sigma70_r3 PF04539.11 gi|15669242|ref|NP_248047.1| - 1.3 8.9 10.9 3.8 7.4 0.0 2.9 3 1 0 3 3 2 0 Sigma-70 region 3 DUF3373 PF11853.3 gi|15669242|ref|NP_248047.1| - 1.4 7.3 4.9 2 6.8 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Vfa1 PF08432.5 gi|15669242|ref|NP_248047.1| - 1.7 8.6 9.3 0.38 10.7 4.4 1.4 2 0 0 2 2 1 0 AAA-ATPase Vps4-associated protein 1 DUF4446 PF14584.1 gi|15669242|ref|NP_248047.1| - 1.7 8.4 7.2 1.7 8.4 3.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Seryl_tRNA_N PF02403.17 gi|15669242|ref|NP_248047.1| - 1.7 8.7 17.2 4.5 7.3 11.8 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Spc24 PF08286.6 gi|15669242|ref|NP_248047.1| - 2.6 7.7 11.2 0.73 9.5 5.4 1.8 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF883 PF05957.8 gi|15669242|ref|NP_248047.1| - 2.8 8.3 10.0 5.3 7.5 2.4 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) ISG65-75 PF11727.3 gi|15669242|ref|NP_248047.1| - 2.9 6.8 11.5 3.6 6.5 7.7 1.4 1 1 0 1 1 1 0 Invariant surface glycoprotein CPSase_L_D3 PF02787.14 gi|15669242|ref|NP_248047.1| - 3.8 7.3 6.7 29 4.4 0.0 2.3 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PhoU PF01895.14 gi|15669242|ref|NP_248047.1| - 4.3 7.8 11.4 1.9 9.0 4.8 2.4 1 1 2 3 3 2 0 PhoU domain DUF4404 PF14357.1 gi|15669242|ref|NP_248047.1| - 4.5 7.7 8.8 4.1 7.9 3.9 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4404) IncA PF04156.9 gi|15669242|ref|NP_248047.1| - 5.6 6.5 11.9 7.3 6.1 8.0 1.5 1 1 0 1 1 1 0 IncA protein HSP70 PF00012.15 gi|15669242|ref|NP_248047.1| - 5.7 4.7 11.6 6.4 4.5 7.8 1.3 1 1 0 1 1 1 0 Hsp70 protein HDV_ag PF01517.13 gi|15669242|ref|NP_248047.1| - 5.8 6.5 10.7 14 5.3 5.9 2.0 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen TMF_DNA_bd PF12329.3 gi|15669242|ref|NP_248047.1| - 6 6.7 23.7 4.1 7.2 13.2 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Med4 PF10018.4 gi|15669242|ref|NP_248047.1| - 6.4 6.1 12.5 6.8 6.0 7.1 1.9 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF972 PF06156.8 gi|15669242|ref|NP_248047.1| - 7.2 7.0 13.0 9.6 6.6 6.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF972) TMPIT PF07851.8 gi|15669242|ref|NP_248047.1| - 7.3 5.5 7.0 12 4.8 4.7 1.5 1 1 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.6 gi|15669242|ref|NP_248047.1| - 9.3 6.1 9.1 3.8 7.4 2.5 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) V_ATPase_I PF01496.14 gi|15669242|ref|NP_248047.1| - 9.8 3.8 12.2 20 2.8 8.5 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family UDPG_MGDP_dh_N PF03721.9 gi|15669243|ref|NP_248048.1| - 1.5e-62 210.2 0.1 4e-62 208.8 0.1 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|15669243|ref|NP_248048.1| - 4.3e-35 119.7 0.3 9.8e-31 105.8 0.0 3.3 3 0 0 3 3 3 2 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|15669243|ref|NP_248048.1| - 8.6e-27 93.3 0.5 1.8e-25 89.1 0.1 3.1 2 1 1 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LAGLIDADG_3 PF14528.1 gi|15669243|ref|NP_248048.1| - 7.7e-15 54.9 13.5 9.5e-10 38.5 0.1 4.1 3 1 1 4 4 4 2 LAGLIDADG-like domain NAD_Gly3P_dh_N PF01210.18 gi|15669243|ref|NP_248048.1| - 2.6e-06 27.2 0.0 0.0023 17.6 0.0 3.5 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|15669243|ref|NP_248048.1| - 0.00011 21.6 0.0 0.00029 20.2 0.0 1.8 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|15669243|ref|NP_248048.1| - 0.00013 21.8 0.0 0.00072 19.4 0.0 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|15669243|ref|NP_248048.1| - 0.0023 17.6 0.0 0.0045 16.6 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Hom_end PF05204.9 gi|15669243|ref|NP_248048.1| - 0.018 14.9 0.0 0.042 13.7 0.0 1.6 1 0 0 1 1 1 0 Homing endonuclease F420_oxidored PF03807.12 gi|15669243|ref|NP_248048.1| - 0.02 15.2 0.3 8.5 6.8 0.0 4.2 4 2 0 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh PF00389.25 gi|15669243|ref|NP_248048.1| - 0.17 11.3 0.2 1.2 8.6 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Epimerase PF01370.16 gi|15669244|ref|NP_248049.1| - 5.4e-57 192.9 0.0 7.3e-57 192.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|15669244|ref|NP_248049.1| - 3.1e-17 62.4 0.0 4.1e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|15669244|ref|NP_248049.1| - 1e-15 57.3 0.0 7.8e-15 54.5 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|15669244|ref|NP_248049.1| - 4.5e-15 55.0 0.0 5.9e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|15669244|ref|NP_248049.1| - 6.1e-09 35.1 0.0 1.8e-06 27.0 0.0 2.1 2 0 0 2 2 2 2 Male sterility protein Epimerase_Csub PF13950.1 gi|15669244|ref|NP_248049.1| - 1.4e-05 24.9 0.0 3.6e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit adh_short PF00106.20 gi|15669244|ref|NP_248049.1| - 0.0017 18.3 0.0 0.0025 17.7 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Methyltransf_31 PF13847.1 gi|15669244|ref|NP_248049.1| - 0.1 12.1 0.1 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Asn_synthase PF00733.16 gi|15669245|ref|NP_248050.1| - 1e-48 166.1 0.0 1.3e-48 165.7 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.1 gi|15669245|ref|NP_248050.1| - 9.4e-37 125.5 0.0 4.4e-36 123.3 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|15669245|ref|NP_248050.1| - 1e-33 116.1 0.0 1.9e-33 115.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|15669245|ref|NP_248050.1| - 4.5e-06 25.6 0.0 0.11 11.2 0.0 3.2 1 1 2 3 3 3 3 Glutamine amidotransferases class-II DUF3700 PF12481.3 gi|15669245|ref|NP_248050.1| - 1.8e-05 24.0 0.3 3.6e-05 23.0 0.2 1.4 1 0 0 1 1 1 1 Aluminium induced protein Glycos_transf_2 PF00535.21 gi|15669246|ref|NP_248051.1| - 1.3e-36 125.8 1.2 1.3e-36 125.8 0.9 1.5 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|15669246|ref|NP_248051.1| - 5.1e-16 59.1 0.0 6.6e-16 58.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|15669246|ref|NP_248051.1| - 4.5e-11 42.3 10.7 6.2e-11 41.9 7.3 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|15669246|ref|NP_248051.1| - 0.00039 20.2 0.0 0.00066 19.4 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Rhamno_transf PF11316.3 gi|15669246|ref|NP_248051.1| - 0.021 14.0 0.1 0.055 12.6 0.0 1.7 1 1 1 2 2 2 0 Putative rhamnosyl transferase CmcH_NodU PF02543.10 gi|15669247|ref|NP_248052.1| - 6.7e-133 443.2 0.0 1e-132 442.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyltransferase Peptidase_M22 PF00814.20 gi|15669247|ref|NP_248052.1| - 0.075 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family Glycos_transf_1 PF00534.15 gi|15669248|ref|NP_248053.1| - 7.7e-33 113.3 2.8 1.8e-31 108.8 0.3 3.1 2 2 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|15669248|ref|NP_248053.1| - 1.6e-11 44.4 0.0 3e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|15669248|ref|NP_248053.1| - 2.9e-06 27.1 4.2 8e-06 25.7 2.9 1.8 1 0 0 1 1 1 1 Glycosyl transferase 4-like Alg14 PF08660.6 gi|15669248|ref|NP_248053.1| - 0.03 14.3 0.2 0.072 13.0 0.1 1.6 1 1 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like Glyco_trans_1_3 PF13528.1 gi|15669248|ref|NP_248053.1| - 0.04 13.1 0.2 0.15 11.2 0.1 2.1 2 1 0 2 2 2 0 Glycosyl transferase family 1 PIG-L PF02585.12 gi|15669248|ref|NP_248053.1| - 0.2 12.1 0.0 1.2 9.6 0.0 2.1 2 0 0 2 2 2 0 GlcNAc-PI de-N-acetylase Polysacc_synt_2 PF02719.10 gi|15669250|ref|NP_248055.1| - 1.5e-115 385.1 0.4 1.8e-115 384.9 0.3 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|15669250|ref|NP_248055.1| - 1.2e-25 89.7 0.2 1.9e-25 89.1 0.1 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|15669250|ref|NP_248055.1| - 1.4e-21 77.0 0.0 9e-21 74.3 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|15669250|ref|NP_248055.1| - 8.6e-13 47.8 0.0 3.1e-11 42.7 0.0 2.1 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|15669250|ref|NP_248055.1| - 1.3e-12 47.2 1.4 2.8e-11 42.8 0.9 2.4 1 1 1 2 2 2 1 Male sterility protein adh_short PF00106.20 gi|15669250|ref|NP_248055.1| - 3.1e-12 46.7 0.0 5.3e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|15669250|ref|NP_248055.1| - 2.9e-09 37.1 0.0 4.5e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 gi|15669250|ref|NP_248055.1| - 6.1e-08 32.2 0.1 9.4e-08 31.5 0.1 1.3 1 0 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|15669250|ref|NP_248055.1| - 1.8e-06 27.7 0.0 3e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 KR domain TrkA_N PF02254.13 gi|15669250|ref|NP_248055.1| - 2.8e-06 27.3 0.3 9.2e-06 25.6 0.2 2.1 1 1 0 1 1 1 1 TrkA-N domain Saccharop_dh PF03435.13 gi|15669250|ref|NP_248055.1| - 8.8e-05 21.6 0.1 0.00016 20.7 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase Shikimate_DH PF01488.15 gi|15669250|ref|NP_248055.1| - 0.00076 19.5 0.1 0.002 18.2 0.1 1.7 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Methyltransf_25 PF13649.1 gi|15669250|ref|NP_248055.1| - 0.014 15.7 0.0 0.036 14.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain DapB_N PF01113.15 gi|15669250|ref|NP_248055.1| - 0.03 14.2 0.1 0.066 13.1 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.12 gi|15669250|ref|NP_248055.1| - 0.05 14.0 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent T2SE PF00437.15 gi|15669250|ref|NP_248055.1| - 0.11 11.4 0.1 0.28 10.0 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein Acetyltransf_3 PF13302.1 gi|15669251|ref|NP_248056.1| - 4.4e-22 78.7 0.2 8.5e-22 77.8 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Glyco_trans_1_3 PF13528.1 gi|15669251|ref|NP_248056.1| - 4.9e-10 39.1 0.7 0.00045 19.5 0.0 3.1 2 1 1 3 3 3 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|15669251|ref|NP_248056.1| - 8.2e-08 32.0 0.0 2.4e-07 30.5 0.0 1.8 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Acetyltransf_4 PF13420.1 gi|15669251|ref|NP_248056.1| - 5.3e-07 29.6 1.1 1.2e-06 28.5 0.1 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|15669251|ref|NP_248056.1| - 1.4e-06 28.2 0.0 4e-06 26.7 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DUF354 PF04007.7 gi|15669251|ref|NP_248056.1| - 1.2e-05 24.3 6.0 1.5e-05 24.0 1.5 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.14 gi|15669251|ref|NP_248056.1| - 2.5e-05 23.2 0.0 5.4e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_1 PF00534.15 gi|15669251|ref|NP_248056.1| - 3.6e-05 23.2 0.0 8.7e-05 21.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Acetyltransf_8 PF13523.1 gi|15669251|ref|NP_248056.1| - 0.00011 22.1 0.1 0.00055 19.8 0.1 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Peroxin-22 PF12827.2 gi|15669251|ref|NP_248056.1| - 0.00012 21.7 1.6 0.00033 20.3 1.1 1.7 1 0 0 1 1 1 1 Peroxisomal biogenesis protein family Glyco_trans_1_4 PF13692.1 gi|15669251|ref|NP_248056.1| - 0.0035 17.4 0.0 0.0087 16.2 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 FR47 PF08445.5 gi|15669251|ref|NP_248056.1| - 0.026 14.2 0.0 0.054 13.2 0.0 1.6 1 0 0 1 1 1 0 FR47-like protein DUF4319 PF14203.1 gi|15669251|ref|NP_248056.1| - 0.12 11.9 1.5 0.37 10.3 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4319) Oxidored_nitro PF00148.14 gi|15669251|ref|NP_248056.1| - 0.17 10.4 0.0 1.2 7.6 0.0 2.0 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase SpoU_sub_bind PF08032.7 gi|15669251|ref|NP_248056.1| - 1.7 8.8 4.1 3.2 7.9 0.2 3.2 3 0 0 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding CTP_transf_3 PF02348.14 gi|15669252|ref|NP_248057.1| - 1.5e-49 168.5 0.2 1.9e-49 168.2 0.1 1.1 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.2 gi|15669252|ref|NP_248057.1| - 0.00033 20.7 0.0 0.00045 20.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF3194 PF11419.3 gi|15669252|ref|NP_248057.1| - 0.041 14.0 0.9 0.27 11.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3194) T4_Gp59_N PF08993.5 gi|15669252|ref|NP_248057.1| - 0.049 13.6 0.0 9.4 6.3 0.0 2.7 2 0 0 2 2 2 0 T4 gene Gp59 loader of gp41 DNA helicase IspD PF01128.14 gi|15669252|ref|NP_248057.1| - 0.15 11.5 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep PF00132.19 gi|15669253|ref|NP_248058.1| - 5.6e-15 54.0 18.8 1.1e-11 43.6 2.6 4.1 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|15669253|ref|NP_248058.1| - 1.5e-09 37.1 17.1 4.4e-08 32.5 1.8 3.1 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase NeuB PF03102.9 gi|15669254|ref|NP_248059.1| - 1.7e-95 318.8 0.0 2.3e-95 318.3 0.0 1.2 1 0 0 1 1 1 1 NeuB family SAF PF08666.7 gi|15669254|ref|NP_248059.1| - 5.5e-08 33.0 0.0 2.5e-07 30.9 0.0 2.1 2 0 0 2 2 2 1 SAF domain DegT_DnrJ_EryC1 PF01041.12 gi|15669255|ref|NP_248060.1| - 1.4e-142 475.0 0.0 1.6e-142 474.9 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 gi|15669255|ref|NP_248060.1| - 1.8e-06 27.1 0.1 3e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|15669255|ref|NP_248060.1| - 1.1e-05 24.7 0.0 1.6e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.14 gi|15669255|ref|NP_248060.1| - 0.001 17.9 0.3 0.0031 16.2 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Polysacc_synt PF01943.12 gi|15669256|ref|NP_248061.1| - 2.6e-57 194.1 39.8 2.6e-57 194.1 27.6 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|15669256|ref|NP_248061.1| - 1.7e-25 89.5 21.5 1.7e-25 89.5 14.9 4.2 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|15669256|ref|NP_248061.1| - 2.6e-09 36.9 53.8 4.7e-09 36.0 21.9 2.3 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein MatE PF01554.13 gi|15669256|ref|NP_248061.1| - 6.7e-09 35.5 34.3 3e-07 30.2 8.5 4.2 2 2 2 4 4 4 2 MatE MVIN PF03023.9 gi|15669256|ref|NP_248061.1| - 0.0012 17.3 45.1 0.0016 16.9 31.1 1.3 1 1 0 1 1 1 1 MviN-like protein Glycos_transf_1 PF00534.15 gi|15669257|ref|NP_248062.1| - 8.8e-38 129.4 1.2 1.8e-37 128.3 0.8 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|15669257|ref|NP_248062.1| - 2.9e-18 66.3 0.0 3.6e-17 62.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|15669257|ref|NP_248062.1| - 7.1e-13 48.6 0.0 1.1e-12 48.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|15669257|ref|NP_248062.1| - 1.3e-08 35.0 0.0 3.6e-08 33.5 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|15669257|ref|NP_248062.1| - 0.00027 21.1 0.0 0.00034 20.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain DUF867 PF05908.6 gi|15669257|ref|NP_248062.1| - 0.029 13.4 0.0 0.06 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF867) DUF1972 PF09314.6 gi|15669257|ref|NP_248062.1| - 0.18 11.2 7.4 0.22 10.9 2.1 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1972) DUF208 PF02677.9 gi|15669257|ref|NP_248062.1| - 0.36 10.5 2.0 0.69 9.6 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized BCR, COG1636 Glyco_hydro_2_N PF02837.13 gi|15669258|ref|NP_248063.1| - 0.028 13.9 0.1 0.052 13.0 0.1 1.5 1 1 0 1 1 1 0 Glycosyl hydrolases family 2, sugar binding domain Myosin_TH1 PF06017.8 gi|15669258|ref|NP_248063.1| - 0.11 11.7 0.3 0.15 11.3 0.2 1.1 1 0 0 1 1 1 0 Myosin tail Ibs_toxin PF13956.1 gi|15669258|ref|NP_248063.1| - 4 7.3 9.8 0.19 11.5 1.8 2.3 2 0 0 2 2 2 0 Toxin Ibs, type I toxin-antitoxin system Torsin PF06309.6 gi|15669259|ref|NP_248064.1| - 0.0075 16.1 0.2 0.015 15.2 0.1 1.4 1 0 0 1 1 1 1 Torsin DUSP PF06337.7 gi|15669259|ref|NP_248064.1| - 0.011 16.1 0.9 0.026 14.9 0.6 1.8 1 1 0 1 1 1 0 DUSP domain Ta0938 PF11494.3 gi|15669259|ref|NP_248064.1| - 0.023 14.8 0.4 0.047 13.7 0.3 1.6 1 0 0 1 1 1 0 Ta0938 ARID PF01388.16 gi|15669259|ref|NP_248064.1| - 0.046 13.5 0.8 0.47 10.3 0.2 2.5 2 0 0 2 2 2 0 ARID/BRIGHT DNA binding domain Ribosomal_L1 PF00687.16 gi|15669260|ref|NP_248065.1| - 0.031 13.6 1.7 0.037 13.3 1.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family PAH PF02671.16 gi|15669260|ref|NP_248065.1| - 0.15 11.6 0.6 0.31 10.6 0.4 1.6 1 1 0 1 1 1 0 Paired amphipathic helix repeat DUF2304 PF10066.4 gi|15669260|ref|NP_248065.1| - 0.27 11.1 0.2 0.27 11.1 0.1 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Fib_alpha PF08702.5 gi|15669260|ref|NP_248065.1| - 0.76 9.8 3.0 1 9.4 2.1 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family RIO1 PF01163.17 gi|15669261|ref|NP_248066.1| - 2.4e-56 190.0 0.1 3.3e-56 189.6 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.6 gi|15669261|ref|NP_248066.1| - 4.5e-14 52.2 0.1 1.2e-13 50.9 0.0 1.8 2 0 0 2 2 2 1 Rio2, N-terminal Pkinase PF00069.20 gi|15669261|ref|NP_248066.1| - 1.2e-09 37.7 0.0 1.8e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.9 gi|15669261|ref|NP_248066.1| - 2.7e-06 26.6 0.0 4.9e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.18 gi|15669261|ref|NP_248066.1| - 3.7e-06 26.8 0.1 0.00041 20.1 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Choline_kinase PF01633.15 gi|15669261|ref|NP_248066.1| - 0.0031 17.1 0.0 0.011 15.3 0.0 2.0 1 1 0 1 1 1 1 Choline/ethanolamine kinase YcbB PF08664.5 gi|15669262|ref|NP_248067.1| - 0.053 13.3 1.0 0.059 13.1 0.7 1.2 1 0 0 1 1 1 0 YcbB domain DUF4413 PF14372.1 gi|15669262|ref|NP_248067.1| - 0.1 12.5 0.6 0.32 11.0 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4413) DDE_Tnp_1_3 PF13612.1 gi|15669262|ref|NP_248067.1| - 0.11 12.1 1.2 0.15 11.8 0.8 1.2 1 0 0 1 1 1 0 Transposase DDE domain MSC PF09402.5 gi|15669262|ref|NP_248067.1| - 0.17 10.5 1.2 0.2 10.3 0.8 1.2 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain DUF668 PF05003.7 gi|15669262|ref|NP_248067.1| - 0.18 12.0 1.5 0.3 11.3 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF668) HTH_12 PF08461.5 gi|15669262|ref|NP_248067.1| - 0.26 11.0 2.9 0.4 10.4 2.0 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Phage_min_cap2 PF06152.6 gi|15669262|ref|NP_248067.1| - 0.26 10.2 2.9 0.31 9.9 2.0 1.1 1 0 0 1 1 1 0 Phage minor capsid protein 2 DUF592 PF04574.8 gi|15669262|ref|NP_248067.1| - 3.1 7.3 7.5 3 7.3 4.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF592) Chorismate_bind PF00425.13 gi|15669263|ref|NP_248068.1| - 8.5e-94 313.6 0.0 1.2e-93 313.2 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|15669263|ref|NP_248068.1| - 2.8e-26 92.2 0.1 7.7e-25 87.5 0.0 2.4 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region Arch_ATPase PF01637.13 gi|15669264|ref|NP_248069.1| - 7.1e-53 179.7 9.8 7.1e-53 179.7 6.8 1.9 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|15669264|ref|NP_248069.1| - 3.2e-09 37.0 0.0 8.7e-09 35.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|15669264|ref|NP_248069.1| - 2.3e-08 34.2 0.0 4.7e-07 29.9 0.0 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|15669264|ref|NP_248069.1| - 5.3e-07 29.5 9.3 2.7e-05 24.0 0.1 3.2 2 1 2 4 4 4 2 AAA domain RNA12 PF10443.4 gi|15669264|ref|NP_248069.1| - 1.8e-06 26.7 0.8 0.0061 15.0 0.0 2.9 1 1 1 2 2 2 2 RNA12 protein AAA PF00004.24 gi|15669264|ref|NP_248069.1| - 1.7e-05 24.9 0.2 6.9e-05 23.0 0.2 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_PrkA PF08298.6 gi|15669264|ref|NP_248069.1| - 0.00054 18.7 0.1 0.00054 18.7 0.1 1.9 2 0 0 2 2 2 1 PrkA AAA domain DUF2075 PF09848.4 gi|15669264|ref|NP_248069.1| - 0.0016 17.5 0.0 0.0028 16.6 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.17 gi|15669264|ref|NP_248069.1| - 0.0061 16.7 0.3 0.054 13.6 0.0 2.7 3 1 1 4 4 4 1 RNA helicase MobB PF03205.9 gi|15669264|ref|NP_248069.1| - 0.0068 16.1 0.0 0.026 14.2 0.0 2.0 2 0 0 2 2 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.1 gi|15669264|ref|NP_248069.1| - 0.022 15.5 4.0 0.078 13.7 0.1 2.9 1 1 1 2 2 2 0 AAA domain NACHT PF05729.7 gi|15669264|ref|NP_248069.1| - 0.027 14.1 0.0 7.1 6.2 0.0 2.2 2 0 0 2 2 2 0 NACHT domain RecA PF00154.16 gi|15669264|ref|NP_248069.1| - 0.038 13.0 0.0 0.066 12.2 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein TK PF00265.13 gi|15669264|ref|NP_248069.1| - 0.038 13.5 6.1 0.098 12.2 0.0 3.2 2 1 1 4 4 4 0 Thymidine kinase PH_11 PF15413.1 gi|15669264|ref|NP_248069.1| - 0.044 14.0 0.6 0.1 12.8 0.1 2.0 2 0 0 2 2 2 0 Pleckstrin homology domain ABC_tran PF00005.22 gi|15669264|ref|NP_248069.1| - 0.061 13.6 0.1 0.72 10.1 0.0 2.3 2 1 0 2 2 2 0 ABC transporter AAA_33 PF13671.1 gi|15669264|ref|NP_248069.1| - 0.092 12.6 0.0 0.16 11.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|15669264|ref|NP_248069.1| - 0.15 11.4 0.0 1 8.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|15669264|ref|NP_248069.1| - 3.5 7.6 6.3 16 5.5 0.1 3.5 2 2 0 2 2 2 0 50S ribosome-binding GTPase tRNA-synt_2b PF00587.20 gi|15669265|ref|NP_248070.1| - 2.8e-11 43.2 0.1 7.7e-11 41.8 0.1 1.7 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) UPF0104 PF03706.8 gi|15669266|ref|NP_248071.1| - 1e-32 113.6 15.7 1.1e-32 113.4 10.9 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) TctA PF01970.11 gi|15669267|ref|NP_248072.1| - 2.6e-61 207.3 43.5 2.9e-61 207.1 30.2 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family UPF0047 PF01894.12 gi|15669269|ref|NP_248074.1| - 3.1e-42 143.0 0.0 3.6e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 TetR_C_8 PF14278.1 gi|15669269|ref|NP_248074.1| - 0.13 12.6 0.0 0.59 10.5 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region TrmB PF01978.14 gi|15669270|ref|NP_248075.1| - 2.7e-21 75.0 0.1 4.2e-21 74.4 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|15669270|ref|NP_248075.1| - 1.1e-05 25.0 0.1 4.8e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 MarR family TFIIE_alpha PF02002.12 gi|15669270|ref|NP_248075.1| - 1.8e-05 24.1 1.5 2.3e-05 23.8 1.1 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_24 PF13412.1 gi|15669270|ref|NP_248075.1| - 2.5e-05 23.5 0.0 5.3e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|15669270|ref|NP_248075.1| - 7.3e-05 22.2 0.0 0.00012 21.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.16 gi|15669270|ref|NP_248075.1| - 0.00053 19.3 0.1 0.001 18.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.17 gi|15669270|ref|NP_248075.1| - 0.00056 19.5 0.0 0.0009 18.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_9 PF08221.6 gi|15669270|ref|NP_248075.1| - 0.00066 19.5 0.0 0.0031 17.3 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_5 PF01022.15 gi|15669270|ref|NP_248075.1| - 0.0012 18.4 0.0 0.0028 17.2 0.0 1.6 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family Penicillinase_R PF03965.11 gi|15669270|ref|NP_248075.1| - 0.0026 17.8 0.1 0.0038 17.2 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_38 PF13936.1 gi|15669270|ref|NP_248075.1| - 0.0033 16.9 0.0 0.0063 16.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15669270|ref|NP_248075.1| - 0.0068 16.0 0.1 0.02 14.5 0.0 1.9 2 0 0 2 2 2 1 HTH domain HTH_28 PF13518.1 gi|15669270|ref|NP_248075.1| - 0.0077 16.2 1.6 0.021 14.8 0.0 2.2 3 0 0 3 3 2 1 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|15669270|ref|NP_248075.1| - 0.0098 15.8 0.0 0.056 13.3 0.0 2.1 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.1 gi|15669270|ref|NP_248075.1| - 0.015 15.5 0.1 0.041 14.2 0.0 1.7 1 1 0 2 2 2 0 Winged helix DNA-binding domain HTH_AsnC-type PF13404.1 gi|15669270|ref|NP_248075.1| - 0.018 14.6 0.1 0.04 13.4 0.1 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|15669270|ref|NP_248075.1| - 0.02 14.3 0.0 0.035 13.5 0.0 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_20 PF12840.2 gi|15669270|ref|NP_248075.1| - 0.026 14.3 0.0 0.054 13.2 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|15669270|ref|NP_248075.1| - 0.041 13.5 0.0 0.1 12.2 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain Phage_rep_org_N PF09681.5 gi|15669270|ref|NP_248075.1| - 0.042 13.4 0.0 0.12 11.9 0.0 1.7 1 1 1 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) PurA PF04845.8 gi|15669270|ref|NP_248075.1| - 0.047 12.8 0.1 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 PurA ssDNA and RNA-binding protein HTH_CodY PF08222.6 gi|15669270|ref|NP_248075.1| - 0.049 12.9 0.5 0.078 12.3 0.1 1.6 2 0 0 2 2 2 0 CodY helix-turn-helix domain Rio2_N PF09202.6 gi|15669270|ref|NP_248075.1| - 0.051 13.6 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 Rio2, N-terminal Rrf2 PF02082.15 gi|15669270|ref|NP_248075.1| - 0.056 13.5 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_36 PF13730.1 gi|15669270|ref|NP_248075.1| - 0.058 13.5 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.4 gi|15669270|ref|NP_248075.1| - 0.069 13.0 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) DUF2172 PF09940.4 gi|15669270|ref|NP_248075.1| - 0.074 11.4 0.0 0.1 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2172) DUF4423 PF14394.1 gi|15669270|ref|NP_248075.1| - 0.12 11.9 0.0 0.2 11.1 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Ribosomal_L12 PF00542.14 gi|15669270|ref|NP_248075.1| - 0.14 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 C-terminal domain DUF3194 PF11419.3 gi|15669270|ref|NP_248075.1| - 0.2 11.8 1.5 23 5.2 0.1 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF3194) FMN_red PF03358.10 gi|15669271|ref|NP_248076.1| - 7.7e-39 132.6 0.0 9.1e-39 132.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|15669271|ref|NP_248076.1| - 1.5e-12 47.4 0.0 1.8e-12 47.1 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Fer4_8 PF13183.1 gi|15669271|ref|NP_248076.1| - 0.0044 17.0 0.1 0.0064 16.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Flavodoxin_5 PF12724.2 gi|15669271|ref|NP_248076.1| - 0.022 14.7 0.0 0.031 14.2 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain Fer4_10 PF13237.1 gi|15669271|ref|NP_248076.1| - 0.022 14.5 0.5 0.039 13.7 0.3 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669271|ref|NP_248076.1| - 0.031 14.1 0.4 0.048 13.5 0.3 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|15669271|ref|NP_248076.1| - 0.069 12.7 0.3 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Shikimate_dh_N PF08501.6 gi|15669272|ref|NP_248077.1| - 1.2e-33 115.0 0.1 3.3e-33 113.5 0.0 1.8 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|15669272|ref|NP_248077.1| - 2.2e-13 50.4 0.6 5e-13 49.3 0.4 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 gi|15669272|ref|NP_248077.1| - 0.00018 20.6 0.2 0.00027 20.0 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase F420_oxidored PF03807.12 gi|15669272|ref|NP_248077.1| - 0.00042 20.6 0.1 0.00093 19.5 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|15669272|ref|NP_248077.1| - 0.072 13.3 0.4 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding RNase_Zc3h12a PF11977.3 gi|15669273|ref|NP_248078.1| - 0.0027 17.5 3.3 0.0027 17.5 0.7 2.2 2 1 0 2 2 2 1 Zc3h12a-like Ribonuclease NYN domain DNA_pol_lambd_f PF10391.4 gi|15669273|ref|NP_248078.1| - 0.0082 15.6 0.1 6.9 6.3 0.0 3.9 4 0 0 4 4 4 1 Fingers domain of DNA polymerase lambda Sp100 PF03172.8 gi|15669273|ref|NP_248078.1| - 0.023 14.6 1.0 1.8 8.6 0.4 2.7 2 0 0 2 2 2 0 Sp100 domain SinI PF08671.5 gi|15669273|ref|NP_248078.1| - 0.14 11.6 2.2 0.68 9.4 0.1 3.2 3 0 0 3 3 3 0 Anti-repressor SinI NTP_transf_2 PF01909.18 gi|15669274|ref|NP_248079.1| - 5.4e-08 33.0 0.5 5.4e-08 33.0 0.4 2.3 2 1 1 3 3 3 1 Nucleotidyltransferase domain DUF1814 PF08843.6 gi|15669274|ref|NP_248079.1| - 0.071 12.8 0.6 0.43 10.3 0.1 2.2 2 0 0 2 2 2 0 Nucleotidyl transferase of unknown function (DUF1814) GHMP_kinases_N PF00288.21 gi|15669275|ref|NP_248080.1| - 1.9e-15 56.6 0.0 4.1e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|15669275|ref|NP_248080.1| - 1e-14 54.4 0.0 2.2e-14 53.4 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal UvrD-helicase PF00580.16 gi|15669275|ref|NP_248080.1| - 0.016 14.5 2.4 0.021 14.1 1.6 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain IDEAL PF08858.5 gi|15669275|ref|NP_248080.1| - 0.048 13.1 0.5 0.16 11.5 0.3 1.8 1 0 0 1 1 1 0 IDEAL domain TRM PF02005.11 gi|15669275|ref|NP_248080.1| - 0.078 11.8 1.2 0.1 11.5 0.1 1.7 2 0 0 2 2 2 0 N2,N2-dimethylguanosine tRNA methyltransferase Occludin_ELL PF07303.8 gi|15669275|ref|NP_248080.1| - 0.21 12.3 5.0 0.45 11.2 3.5 1.5 1 0 0 1 1 1 0 Occludin homology domain DASH_Dad1 PF08649.5 gi|15669275|ref|NP_248080.1| - 9 6.0 10.5 7.2 6.3 1.3 3.5 4 0 0 4 4 4 0 DASH complex subunit Dad1 ABC_tran PF00005.22 gi|15669276|ref|NP_248081.1| - 1.7e-35 122.2 0.0 4e-35 121.1 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|15669276|ref|NP_248081.1| - 5.4e-17 62.6 0.1 1e-12 48.6 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|15669276|ref|NP_248081.1| - 8e-09 35.0 0.0 4.9e-08 32.4 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|15669276|ref|NP_248081.1| - 5.8e-06 25.6 0.0 0.00017 20.8 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|15669276|ref|NP_248081.1| - 0.00019 20.9 0.1 0.00034 20.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|15669276|ref|NP_248081.1| - 0.018 15.3 0.1 0.032 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Peptidase_M23 PF01551.17 gi|15669276|ref|NP_248081.1| - 0.037 14.0 0.0 3.7 7.6 0.0 2.4 2 0 0 2 2 2 0 Peptidase family M23 SbcCD_C PF13558.1 gi|15669276|ref|NP_248081.1| - 0.053 13.4 0.0 0.33 10.8 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF258 PF03193.11 gi|15669276|ref|NP_248081.1| - 0.068 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_13 PF13166.1 gi|15669276|ref|NP_248081.1| - 0.087 11.2 0.1 6.3 5.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|15669276|ref|NP_248081.1| - 0.097 12.8 0.0 4 7.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain CbiQ PF02361.11 gi|15669277|ref|NP_248082.1| - 2.1e-52 177.9 9.9 2.1e-52 177.9 6.9 1.4 2 0 0 2 2 2 1 Cobalt transport protein CbiN PF02553.10 gi|15669278|ref|NP_248083.1| - 9.5e-34 115.2 0.3 1.1e-33 114.9 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiM PF01891.11 gi|15669279|ref|NP_248084.1| - 1.5e-55 188.0 16.4 1.7e-55 187.8 11.4 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ATP-synt_J PF04911.7 gi|15669279|ref|NP_248084.1| - 0.012 15.0 0.0 0.051 13.0 0.0 2.2 2 0 0 2 2 2 0 ATP synthase j chain NicO PF03824.11 gi|15669280|ref|NP_248085.1| - 7.7e-40 136.9 20.8 8e-22 77.8 6.1 2.0 1 1 1 2 2 2 2 High-affinity nickel-transport protein DsbD_2 PF13386.1 gi|15669280|ref|NP_248085.1| - 3e-11 43.4 9.5 4.7e-10 39.5 6.5 2.3 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD PF02683.10 gi|15669280|ref|NP_248085.1| - 3.8e-08 33.2 14.9 2.9e-06 27.0 1.4 2.1 2 0 0 2 2 2 2 Cytochrome C biogenesis protein transmembrane region DUF2162 PF09930.4 gi|15669280|ref|NP_248085.1| - 5.6e-07 28.9 7.9 8.3e-07 28.3 5.5 1.4 1 0 0 1 1 1 1 Predicted transporter (DUF2162) RseC_MucC PF04246.7 gi|15669280|ref|NP_248085.1| - 0.095 12.2 3.0 0.19 11.3 0.1 2.4 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Tetraspannin PF00335.15 gi|15669280|ref|NP_248085.1| - 0.72 9.0 15.6 0.0088 15.3 3.4 2.8 2 2 0 2 2 2 0 Tetraspanin family DUF202 PF02656.10 gi|15669280|ref|NP_248085.1| - 2.6 8.3 10.3 3.5 7.9 0.2 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF202) Radical_SAM PF04055.16 gi|15669281|ref|NP_248086.1| - 5e-13 49.5 0.2 8.1e-13 48.8 0.2 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Seryl_tRNA_N PF02403.17 gi|15669281|ref|NP_248086.1| - 0.026 14.5 0.3 0.72 9.8 0.0 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Evr1_Alr PF04777.8 gi|15669281|ref|NP_248086.1| - 0.47 10.3 4.7 0.82 9.6 0.2 2.6 2 1 0 2 2 2 0 Erv1 / Alr family YcaO PF02624.11 gi|15669282|ref|NP_248087.1| - 1.5e-81 274.4 0.0 1.9e-81 274.1 0.0 1.1 1 0 0 1 1 1 1 YcaO-like family DUF1743 PF08489.6 gi|15669283|ref|NP_248088.1| - 7.9e-42 141.7 0.0 1.6e-41 140.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.20 gi|15669283|ref|NP_248088.1| - 8.3e-09 35.1 0.3 2.2e-08 33.8 0.2 1.8 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OrfB_Zn_ribbon PF07282.6 gi|15669283|ref|NP_248088.1| - 0.0044 16.6 0.6 0.012 15.2 0.4 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain C1_1 PF00130.17 gi|15669283|ref|NP_248088.1| - 0.0077 15.9 2.6 0.014 15.0 1.8 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn_Tnp_IS1595 PF12760.2 gi|15669283|ref|NP_248088.1| - 0.045 13.5 3.9 0.089 12.6 2.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.2 gi|15669283|ref|NP_248088.1| - 0.048 13.4 1.4 0.12 12.1 1.0 1.6 1 0 0 1 1 1 0 Double zinc ribbon IBR PF01485.16 gi|15669283|ref|NP_248088.1| - 0.054 13.3 2.2 0.14 12.0 1.5 1.6 1 0 0 1 1 1 0 IBR domain MSA-2c PF12238.3 gi|15669283|ref|NP_248088.1| - 0.062 12.9 3.0 0.12 12.0 2.1 1.3 1 0 0 1 1 1 0 Merozoite surface antigen 2c zinc-ribbons_6 PF07191.7 gi|15669283|ref|NP_248088.1| - 0.063 13.0 1.5 0.093 12.5 0.4 1.7 2 0 0 2 2 2 0 zinc-ribbons Zn_ribbon_recom PF13408.1 gi|15669283|ref|NP_248088.1| - 0.15 12.3 4.8 0.5 10.6 3.3 1.9 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain zf-IS66 PF13005.2 gi|15669283|ref|NP_248088.1| - 5.2 7.1 6.2 0.53 10.2 0.2 2.2 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 Semialdhyde_dh PF01118.19 gi|161579522|ref|NP_248089.2| - 7.3e-36 123.1 0.0 1.2e-35 122.3 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|161579522|ref|NP_248089.2| - 1.5e-31 109.6 0.0 2.1e-31 109.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|161579522|ref|NP_248089.2| - 2.8e-05 24.5 0.0 5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Saccharop_dh PF03435.13 gi|161579522|ref|NP_248089.2| - 0.0078 15.2 0.0 0.011 14.7 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase DapB_N PF01113.15 gi|161579522|ref|NP_248089.2| - 0.0089 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.1 gi|161579522|ref|NP_248089.2| - 0.0095 15.9 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|161579522|ref|NP_248089.2| - 0.058 12.8 0.0 0.12 11.7 0.0 1.6 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Orn_Arg_deC_N PF02784.11 gi|15669285|ref|NP_248090.1| - 6.2e-63 212.3 0.2 2.6e-62 210.2 0.1 1.8 2 0 0 2 2 2 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|15669285|ref|NP_248090.1| - 8.2e-22 77.1 0.0 1.3e-21 76.4 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.15 gi|15669285|ref|NP_248090.1| - 0.031 13.8 0.0 0.081 12.4 0.0 1.7 1 1 0 1 1 1 0 Alanine racemase, N-terminal domain UPF0180 PF03698.8 gi|15669285|ref|NP_248090.1| - 0.052 13.3 0.1 0.21 11.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) LAGLIDADG_2 PF03161.8 gi|15669286|ref|NP_248091.1| - 4.9e-24 85.2 2.0 6.2e-24 84.8 1.4 1.1 1 0 0 1 1 1 1 LAGLIDADG DNA endonuclease family LAGLIDADG_WhiA PF14527.1 gi|15669286|ref|NP_248091.1| - 9.1e-05 22.2 0.1 0.0005 19.8 0.0 1.9 2 0 0 2 2 2 1 WhiA LAGLIDADG-like domain LAGLIDADG_3 PF14528.1 gi|15669286|ref|NP_248091.1| - 0.00047 20.3 2.4 0.016 15.4 0.2 2.6 2 0 0 2 2 2 1 LAGLIDADG-like domain CPSase_L_D3 PF02787.14 gi|15669286|ref|NP_248091.1| - 0.012 15.3 0.0 0.024 14.3 0.0 1.5 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HTH_23 PF13384.1 gi|15669286|ref|NP_248091.1| - 0.022 14.4 0.0 0.088 12.4 0.0 2.1 1 0 0 1 1 1 0 Homeodomain-like domain DUF603 PF04645.7 gi|15669286|ref|NP_248091.1| - 0.043 13.7 0.0 0.072 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF603 CRAL_TRIO PF00650.15 gi|15669286|ref|NP_248091.1| - 0.058 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 CRAL/TRIO domain DUF556 PF04476.8 gi|15669287|ref|NP_248092.1| - 2e-134 446.1 5.8 2.2e-134 446.0 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF556) DeoC PF01791.4 gi|15669287|ref|NP_248092.1| - 0.00031 20.1 6.7 0.0044 16.3 2.9 2.9 2 1 0 2 2 2 1 DeoC/LacD family aldolase QRPTase_C PF01729.14 gi|15669287|ref|NP_248092.1| - 0.0014 18.2 0.2 0.16 11.4 0.0 2.3 1 1 0 2 2 2 2 Quinolinate phosphoribosyl transferase, C-terminal domain Pterin_bind PF00809.17 gi|15669287|ref|NP_248092.1| - 0.025 13.9 0.3 0.12 11.7 0.0 2.2 3 0 0 3 3 3 0 Pterin binding enzyme PGM_PMM_I PF02878.11 gi|15669288|ref|NP_248093.1| - 6.7e-36 122.8 0.3 1.6e-35 121.5 0.1 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.11 gi|15669288|ref|NP_248093.1| - 3.4e-24 85.0 0.0 7.5e-24 83.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.11 gi|15669288|ref|NP_248093.1| - 1.2e-19 70.5 0.0 3.4e-19 69.0 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.15 gi|15669288|ref|NP_248093.1| - 6.7e-14 51.6 0.1 2.4e-13 49.8 0.0 2.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain NTP_transferase PF00483.18 gi|15669289|ref|NP_248094.1| - 6.8e-44 150.0 0.1 1.1e-43 149.3 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|15669289|ref|NP_248094.1| - 2.1e-20 71.2 16.3 1.4e-05 24.3 0.5 4.4 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|15669289|ref|NP_248094.1| - 4.3e-13 49.6 0.0 5.5e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|15669289|ref|NP_248094.1| - 4.5e-05 22.9 19.6 0.026 14.0 0.1 5.0 5 1 1 6 6 6 4 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|15669289|ref|NP_248094.1| - 9.2e-05 22.0 0.0 0.00015 21.3 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.14 gi|15669289|ref|NP_248094.1| - 0.028 14.0 1.1 0.12 11.9 0.1 2.0 1 1 0 2 2 2 0 Cytidylyltransferase MltA PF03562.12 gi|15669289|ref|NP_248094.1| - 0.1 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 MltA specific insert domain Bactofilin PF04519.8 gi|15669289|ref|NP_248094.1| - 0.68 9.9 8.5 0.45 10.5 3.0 2.7 3 1 0 3 3 3 0 Polymer-forming cytoskeletal dUTPase PF00692.14 gi|15669290|ref|NP_248095.1| - 4.7e-12 45.4 0.0 7.9e-12 44.7 0.0 1.3 1 0 0 1 1 1 1 dUTPase DCD PF06559.6 gi|15669290|ref|NP_248095.1| - 0.0081 14.5 0.0 0.017 13.5 0.0 1.5 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Plasmid_stabil PF05016.9 gi|15669291|ref|NP_248096.1| - 8.2e-11 42.1 0.8 9.1e-11 42.0 0.6 1.0 1 0 0 1 1 1 1 Plasmid stabilisation system protein GHMP_kinases_N PF00288.21 gi|15669292|ref|NP_248097.1| - 2.2e-14 53.2 1.9 4.3e-14 52.3 1.3 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|15669292|ref|NP_248097.1| - 4.4e-08 33.2 0.0 1.1e-07 31.9 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal WHIM1 PF15612.1 gi|15669292|ref|NP_248097.1| - 0.027 14.4 0.0 0.05 13.5 0.0 1.5 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 TrkA_N PF02254.13 gi|15669293|ref|NP_248098.1| - 2.7e-32 111.2 2.2 5.3e-32 110.2 1.5 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|15669293|ref|NP_248098.1| - 2.6e-15 55.7 0.3 9.1e-15 54.0 0.1 2.0 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|15669293|ref|NP_248098.1| - 5.1e-06 26.6 0.7 1.3e-05 25.4 0.1 1.9 2 1 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|15669293|ref|NP_248098.1| - 1.1e-05 24.9 0.8 5e-05 22.7 0.2 2.1 1 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|15669293|ref|NP_248098.1| - 0.00017 21.2 0.1 0.00027 20.6 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.16 gi|15669293|ref|NP_248098.1| - 0.00071 19.4 0.5 0.0012 18.7 0.3 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.10 gi|15669293|ref|NP_248098.1| - 0.00078 19.3 0.1 0.0013 18.5 0.1 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DAO PF01266.19 gi|15669293|ref|NP_248098.1| - 0.0024 16.8 0.0 0.0025 16.7 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.18 gi|15669293|ref|NP_248098.1| - 0.0029 17.3 0.0 0.007 16.0 0.0 1.7 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|15669293|ref|NP_248098.1| - 0.0034 16.8 0.2 0.01 15.3 0.0 1.9 2 1 0 2 2 2 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|15669293|ref|NP_248098.1| - 0.0077 16.6 0.5 0.032 14.6 0.1 2.2 2 1 1 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent UPF0146 PF03686.8 gi|15669293|ref|NP_248098.1| - 0.01 15.6 0.2 0.027 14.2 0.2 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Pyr_redox_2 PF07992.9 gi|15669293|ref|NP_248098.1| - 0.02 14.7 0.5 0.084 12.7 0.3 2.0 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_31 PF13847.1 gi|15669293|ref|NP_248098.1| - 0.025 14.1 0.5 0.12 11.9 0.1 1.9 1 1 0 2 2 2 0 Methyltransferase domain ELFV_dehydrog PF00208.16 gi|15669293|ref|NP_248098.1| - 0.031 13.8 0.1 0.037 13.5 0.1 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NAD_binding_10 PF13460.1 gi|15669293|ref|NP_248098.1| - 0.057 13.4 0.1 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 NADH(P)-binding Pyr_redox PF00070.22 gi|15669293|ref|NP_248098.1| - 0.12 12.8 0.3 0.46 10.9 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|15669293|ref|NP_248098.1| - 0.36 9.9 2.5 0.67 9.0 1.5 1.6 1 1 0 1 1 1 0 Thi4 family DUF483 PF04467.7 gi|15669294|ref|NP_248099.1| - 5.6e-56 188.1 1.5 7.5e-56 187.6 1.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF483) DUF288 PF03385.12 gi|15669295|ref|NP_248100.1| - 0.0073 14.8 2.9 0.011 14.1 1.9 1.4 1 1 0 1 1 1 1 Protein of unknown function, DUF288 Herpes_UL6 PF01763.11 gi|15669295|ref|NP_248100.1| - 0.019 13.1 6.9 0.024 12.8 4.8 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Hemagglutinin PF00509.13 gi|15669295|ref|NP_248100.1| - 0.021 12.9 1.1 0.031 12.4 0.8 1.2 1 0 0 1 1 1 0 Haemagglutinin COX6B PF02297.12 gi|15669295|ref|NP_248100.1| - 0.028 14.4 1.2 0.045 13.7 0.8 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb Syntaxin_2 PF14523.1 gi|15669295|ref|NP_248100.1| - 0.071 13.1 5.2 0.098 12.6 0.7 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Arteri_nucleo PF01481.11 gi|15669295|ref|NP_248100.1| - 0.1 12.6 0.3 0.15 12.1 0.2 1.3 1 1 0 1 1 1 0 Arterivirus nucleocapsid protein LXG PF04740.7 gi|15669295|ref|NP_248100.1| - 0.11 12.3 6.3 0.16 11.7 4.4 1.2 1 0 0 1 1 1 0 LXG domain of WXG superfamily tRNA-synt_2 PF00152.15 gi|15669295|ref|NP_248100.1| - 0.14 10.9 4.1 0.16 10.6 2.8 1.1 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Imm5 PF14423.1 gi|15669295|ref|NP_248100.1| - 0.25 10.9 3.7 0.33 10.5 2.6 1.2 1 0 0 1 1 1 0 Immunity protein Imm5 DUF2533 PF10752.4 gi|15669295|ref|NP_248100.1| - 0.44 10.8 2.9 1.1 9.6 1.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2533) Fib_alpha PF08702.5 gi|15669295|ref|NP_248100.1| - 1.8 8.7 7.2 3.1 7.9 5.0 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ACCA PF03255.9 gi|15669295|ref|NP_248100.1| - 3.6 7.1 6.8 0.6 9.6 0.5 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Prefoldin_3 PF13758.1 gi|15669295|ref|NP_248100.1| - 3.7 7.3 9.6 98 2.8 6.6 2.2 1 1 0 1 1 1 0 Prefoldin subunit DUF1640 PF07798.6 gi|15669295|ref|NP_248100.1| - 5.2 7.0 11.7 7.7 6.5 8.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) B5 PF03484.10 gi|15669296|ref|NP_248101.1| - 4.8e-20 71.1 2.4 8e-16 57.6 0.1 3.6 4 0 0 4 4 4 2 tRNA synthetase B5 domain B3_4 PF03483.12 gi|15669296|ref|NP_248101.1| - 1.7e-16 60.1 0.3 5.6e-16 58.4 0.0 1.8 2 0 0 2 2 2 1 B3/4 domain tRNA-synt_2d PF01409.15 gi|15669296|ref|NP_248101.1| - 7.1e-08 31.9 0.0 1.5e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Pribosyltran PF00156.22 gi|15669297|ref|NP_248102.1| - 4.8e-16 58.6 5.5 7.9e-16 57.9 3.2 1.8 2 1 0 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|15669297|ref|NP_248102.1| - 0.00018 20.8 0.0 0.00035 19.8 0.0 1.3 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase GARS_C PF02843.11 gi|15669297|ref|NP_248102.1| - 0.04 14.0 0.0 0.071 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain Ribosomal_L18p PF00861.17 gi|15669297|ref|NP_248102.1| - 0.051 13.7 1.8 0.14 12.3 1.2 1.7 1 1 0 1 1 1 0 Ribosomal L18p/L5e family PRTase_2 PF15609.1 gi|15669297|ref|NP_248102.1| - 0.056 12.7 0.4 0.13 11.5 0.1 1.7 2 0 0 2 2 2 0 Phosphoribosyl transferase PDZ PF00595.19 gi|15669297|ref|NP_248102.1| - 0.065 13.4 1.5 0.073 13.2 0.2 1.6 2 0 0 2 2 2 0 PDZ domain (Also known as DHR or GLGF) DUF530 PF04409.7 gi|15669298|ref|NP_248103.1| - 6.6e-180 598.5 37.7 8.6e-137 456.3 17.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF530) tRNA_NucTransf2 PF09249.6 gi|15669299|ref|NP_248104.1| - 3.5e-45 152.5 0.1 7.1e-45 151.5 0.1 1.6 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|15669299|ref|NP_248104.1| - 4.2e-17 62.2 1.0 4.2e-17 62.2 0.7 2.5 3 0 0 3 3 3 1 Nucleotidyltransferase domain LXG PF04740.7 gi|15669299|ref|NP_248104.1| - 0.41 10.4 3.4 0.41 10.4 0.4 2.2 3 0 0 3 3 3 0 LXG domain of WXG superfamily Glycos_transf_4 PF00953.16 gi|15669300|ref|NP_248105.1| - 1.4e-27 96.4 17.4 1.4e-27 96.4 12.0 2.2 3 0 0 3 3 3 1 Glycosyl transferase family 4 DUF4341 PF14241.1 gi|15669300|ref|NP_248105.1| - 2.6 7.8 9.9 1.2 8.9 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4341) Form_Nir_trans PF01226.12 gi|15669301|ref|NP_248106.1| - 0.0094 14.8 0.2 0.0094 14.8 0.1 2.0 2 0 0 2 2 2 1 Formate/nitrite transporter 7tm_7 PF08395.7 gi|15669301|ref|NP_248106.1| - 0.024 13.6 0.1 0.028 13.4 0.1 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor 2TM PF13239.1 gi|15669301|ref|NP_248106.1| - 0.03 14.3 0.3 0.03 14.3 0.2 2.4 2 1 0 2 2 2 0 2TM domain FA_desaturase PF00487.19 gi|15669301|ref|NP_248106.1| - 0.045 13.1 0.5 0.21 11.0 0.0 1.9 2 0 0 2 2 2 0 Fatty acid desaturase DUF2207 PF09972.4 gi|15669301|ref|NP_248106.1| - 0.14 10.7 10.9 0.071 11.6 0.8 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) YlaC PF10777.4 gi|15669301|ref|NP_248106.1| - 2 7.9 5.1 10 5.6 0.1 2.2 2 0 0 2 2 2 0 Inner membrane protein YlaC FixP_N PF14715.1 gi|15669301|ref|NP_248106.1| - 3.5 7.0 8.0 5.7 6.4 0.1 3.0 3 0 0 3 3 3 0 N-terminal domain of cytochrome oxidase-cbb3, FixP BtpA PF03437.10 gi|15669302|ref|NP_248107.1| - 9.2e-122 405.1 2.3 1e-121 404.9 1.6 1.0 1 0 0 1 1 1 1 BtpA family PcrB PF01884.12 gi|15669302|ref|NP_248107.1| - 0.0022 17.2 2.0 0.017 14.3 0.1 2.7 2 1 1 3 3 3 1 PcrB family UPF0128 PF03673.8 gi|15669302|ref|NP_248107.1| - 0.068 12.4 0.0 1.5 8.0 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0128) Asn_synthase PF00733.16 gi|15669303|ref|NP_248108.1| - 7.9e-77 258.1 0.1 1.3e-76 257.5 0.1 1.3 1 0 0 1 1 1 1 Asparagine synthase GATase_6 PF13522.1 gi|15669303|ref|NP_248108.1| - 4.9e-37 126.8 0.0 1.4e-36 125.4 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|15669303|ref|NP_248108.1| - 2.7e-35 120.8 0.0 5e-35 119.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|15669303|ref|NP_248108.1| - 3.9e-08 32.4 0.0 0.037 12.7 0.0 3.2 1 1 2 3 3 3 3 Glutamine amidotransferases class-II DUF3700 PF12481.3 gi|15669303|ref|NP_248108.1| - 0.0006 19.0 0.0 0.0013 18.0 0.0 1.5 1 0 0 1 1 1 1 Aluminium induced protein NAD_synthase PF02540.12 gi|15669303|ref|NP_248108.1| - 0.0069 15.3 0.0 0.012 14.4 0.0 1.4 1 0 0 1 1 1 1 NAD synthase Prefoldin PF02996.12 gi|15669303|ref|NP_248108.1| - 0.017 14.7 1.5 0.15 11.7 0.3 2.7 3 0 0 3 3 3 0 Prefoldin subunit TPR_2 PF07719.12 gi|15669303|ref|NP_248108.1| - 0.07 13.0 0.6 0.19 11.7 0.4 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat IFRD PF05004.8 gi|15669303|ref|NP_248108.1| - 0.082 11.9 0.1 0.15 11.1 0.1 1.3 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) tRNA_Me_trans PF03054.11 gi|15669303|ref|NP_248108.1| - 0.11 10.9 0.4 0.29 9.6 0.3 1.7 1 1 0 1 1 1 0 tRNA methyl transferase NTP_transf_3 PF12804.2 gi|15669304|ref|NP_248109.1| - 2.9e-15 56.6 0.0 3.5e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.18 gi|15669304|ref|NP_248109.1| - 9.7e-06 25.0 0.0 1.1e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.14 gi|15669304|ref|NP_248109.1| - 1.8e-05 24.3 0.0 0.00023 20.7 0.0 2.0 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.14 gi|15669304|ref|NP_248109.1| - 0.00031 20.4 0.1 0.00057 19.5 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase PRC PF05239.11 gi|15669305|ref|NP_248110.1| - 1.8e-15 56.5 0.9 2e-15 56.4 0.6 1.0 1 0 0 1 1 1 1 PRC-barrel domain DAP_epimerase PF01678.14 gi|15669306|ref|NP_248111.1| - 5.5e-73 242.5 2.8 5.6e-39 132.7 0.0 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.11 gi|15669306|ref|NP_248111.1| - 0.0003 20.1 0.0 0.0019 17.4 0.0 2.0 1 1 1 2 2 2 1 Phenazine biosynthesis-like protein HTH_1 PF00126.22 gi|15669307|ref|NP_248112.1| - 4e-12 45.7 0.0 5.9e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.1 gi|15669307|ref|NP_248112.1| - 0.0055 16.0 0.8 0.014 14.7 0.6 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GerE PF00196.14 gi|15669307|ref|NP_248112.1| - 0.035 13.4 0.3 0.24 10.7 0.2 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family MarR_2 PF12802.2 gi|15669307|ref|NP_248112.1| - 0.039 13.6 0.0 0.078 12.6 0.0 1.4 1 0 0 1 1 1 0 MarR family PIN PF01850.16 gi|15669308|ref|NP_248113.1| - 8.6e-06 26.0 0.0 1.2e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 PIN domain DUF217 PF02697.9 gi|15669309|ref|NP_248114.1| - 6.2e-22 77.6 6.4 7.4e-22 77.3 4.5 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 RHH_1 PF01402.16 gi|15669309|ref|NP_248114.1| - 0.0036 17.1 1.1 0.0036 17.1 0.7 2.6 2 1 0 2 2 2 1 Ribbon-helix-helix protein, copG family DegV PF02645.11 gi|15669309|ref|NP_248114.1| - 0.0092 15.0 0.5 0.01 14.9 0.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein, DegV family COG1307 PLU-1 PF08429.6 gi|15669309|ref|NP_248114.1| - 0.015 14.2 1.0 0.016 14.1 0.7 1.0 1 0 0 1 1 1 0 PLU-1-like protein DUF2191 PF09957.4 gi|15669309|ref|NP_248114.1| - 0.051 13.3 1.2 0.16 11.8 0.9 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2191) Snurportin1 PF11538.3 gi|15669309|ref|NP_248114.1| - 0.28 11.0 0.3 0.28 11.0 0.2 1.7 2 1 0 2 2 2 0 Snurportin1 Methyltransf_11 PF08241.7 gi|15669310|ref|NP_248115.1| - 9.1e-21 74.1 0.0 2.1e-20 72.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669310|ref|NP_248115.1| - 4.8e-15 55.6 0.0 6.1e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669310|ref|NP_248115.1| - 1.2e-11 44.3 1.2 4.6e-11 42.5 0.7 1.7 1 1 1 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|15669310|ref|NP_248115.1| - 1.1e-08 34.4 1.9 1.2e-07 31.1 0.1 2.4 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|15669310|ref|NP_248115.1| - 1.5e-08 34.9 0.0 3.6e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|15669310|ref|NP_248115.1| - 1e-06 29.0 0.0 1.9e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669310|ref|NP_248115.1| - 1e-06 29.3 0.0 2e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|15669310|ref|NP_248115.1| - 3e-05 23.4 0.0 5.5e-05 22.6 0.0 1.5 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.10 gi|15669310|ref|NP_248115.1| - 0.00016 21.3 0.4 0.00073 19.2 0.3 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase N6_N4_Mtase PF01555.13 gi|15669310|ref|NP_248115.1| - 0.00039 19.9 1.2 0.0018 17.7 0.1 2.3 2 1 0 2 2 2 1 DNA methylase IF2_N PF04760.10 gi|15669310|ref|NP_248115.1| - 0.0078 15.8 0.6 0.027 14.1 0.1 2.2 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region ADH_zinc_N PF00107.21 gi|15669310|ref|NP_248115.1| - 0.033 13.7 0.1 0.1 12.1 0.0 1.8 2 1 0 2 2 2 0 Zinc-binding dehydrogenase PTS_IIB PF02302.12 gi|15669310|ref|NP_248115.1| - 0.037 14.4 3.1 0.065 13.7 0.3 2.2 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit LXG PF04740.7 gi|15669310|ref|NP_248115.1| - 0.047 13.4 1.3 0.07 12.9 0.9 1.2 1 0 0 1 1 1 0 LXG domain of WXG superfamily DREV PF05219.7 gi|15669310|ref|NP_248115.1| - 0.074 11.9 0.0 0.094 11.5 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.9 gi|15669310|ref|NP_248115.1| - 0.079 12.3 0.1 0.36 10.1 0.1 2.0 1 1 0 1 1 1 0 Methyltransferase small domain GSH-S_N PF02951.9 gi|15669310|ref|NP_248115.1| - 0.12 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain DEAD PF00270.24 gi|15669311|ref|NP_248116.1| - 1.7e-26 92.7 0.0 5.3e-26 91.1 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase LAGLIDADG_3 PF14528.1 gi|15669311|ref|NP_248116.1| - 2.7e-19 69.1 1.8 2.4e-18 66.1 0.3 3.3 2 0 0 2 2 2 1 LAGLIDADG-like domain ResIII PF04851.10 gi|15669311|ref|NP_248116.1| - 7.4e-11 42.2 0.3 1.9e-10 40.9 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.1 gi|15669311|ref|NP_248116.1| - 3.4e-08 33.5 0.8 1.7e-07 31.3 0.5 2.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.4 gi|15669311|ref|NP_248116.1| - 3.8e-05 23.1 0.0 0.00014 21.3 0.0 2.1 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda LAGLIDADG_WhiA PF14527.1 gi|15669311|ref|NP_248116.1| - 0.0079 16.0 4.5 0.017 14.9 0.1 3.5 2 1 1 3 3 3 1 WhiA LAGLIDADG-like domain Hint PF01079.15 gi|15669311|ref|NP_248116.1| - 0.0091 15.2 0.0 0.018 14.2 0.0 1.4 1 0 0 1 1 1 1 Hint module Helicase_C PF00271.26 gi|15669311|ref|NP_248116.1| - 0.078 12.8 0.1 15 5.5 0.0 2.6 2 0 0 2 2 2 0 Helicase conserved C-terminal domain PT-HINT PF07591.6 gi|15669311|ref|NP_248116.1| - 0.31 10.9 8.0 0.14 11.9 0.2 3.4 3 0 0 3 3 3 0 Pretoxin HINT domain MMR_HSR1 PF01926.18 gi|15669313|ref|NP_248118.1| - 5.7e-19 68.1 1.3 5.7e-19 68.1 0.9 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15669313|ref|NP_248118.1| - 3.5e-11 42.6 1.6 7.4e-11 41.5 1.1 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP-bdg_N PF13167.1 gi|15669313|ref|NP_248118.1| - 1e-10 41.6 1.0 1e-10 41.6 0.7 2.0 2 0 0 2 2 2 1 GTP-binding GTPase N-terminal GTP_EFTU PF00009.22 gi|15669313|ref|NP_248118.1| - 1.5e-08 34.2 7.3 8.6e-08 31.8 2.6 2.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|15669313|ref|NP_248118.1| - 1.5e-06 28.6 1.3 2.5e-06 27.9 0.2 2.0 2 0 0 2 2 1 1 Miro-like protein DUF258 PF03193.11 gi|15669313|ref|NP_248118.1| - 0.00028 20.1 1.0 0.00079 18.6 0.1 2.1 3 0 0 3 3 3 1 Protein of unknown function, DUF258 PduV-EutP PF10662.4 gi|15669313|ref|NP_248118.1| - 0.0014 18.1 4.6 0.032 13.7 3.2 2.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.22 gi|15669313|ref|NP_248118.1| - 0.0015 18.8 2.7 0.0021 18.3 0.3 2.3 2 1 1 3 3 3 1 ABC transporter Dynamin_N PF00350.18 gi|15669313|ref|NP_248118.1| - 0.0017 18.1 9.2 0.0044 16.8 0.2 3.7 3 1 2 5 5 5 1 Dynamin family SRPRB PF09439.5 gi|15669313|ref|NP_248118.1| - 0.0029 16.8 5.4 0.0032 16.6 2.2 2.2 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit cobW PF02492.14 gi|15669313|ref|NP_248118.1| - 0.0066 15.9 5.8 0.59 9.5 0.9 2.6 1 1 1 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain Arf PF00025.16 gi|15669313|ref|NP_248118.1| - 0.0089 15.2 4.8 0.038 13.2 3.2 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family Virul_Fac PF10139.4 gi|15669313|ref|NP_248118.1| - 0.013 13.4 0.1 0.021 12.7 0.1 1.3 1 0 0 1 1 1 0 Putative bacterial virulence factor Ras PF00071.17 gi|15669313|ref|NP_248118.1| - 0.025 13.9 3.8 0.085 12.2 1.0 2.6 2 1 0 2 2 2 0 Ras family Gtr1_RagA PF04670.7 gi|15669313|ref|NP_248118.1| - 0.067 12.3 3.8 0.27 10.3 2.6 2.2 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF1192 PF06698.6 gi|15669313|ref|NP_248118.1| - 2.2 8.1 5.6 28 4.6 0.5 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) Arch_ATPase PF01637.13 gi|15669313|ref|NP_248118.1| - 3.3 7.3 13.6 0.064 12.9 2.9 2.6 1 1 2 3 3 3 0 Archaeal ATPase Syntaxin-6_N PF09177.6 gi|15669313|ref|NP_248118.1| - 8.4 6.8 8.2 1.6 9.2 0.0 3.6 4 2 0 4 4 4 0 Syntaxin 6, N-terminal TatD_DNase PF01026.16 gi|15669314|ref|NP_248119.1| - 2e-30 105.8 0.0 2.6e-30 105.4 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase AP_endonuc_2 PF01261.19 gi|15669314|ref|NP_248119.1| - 0.039 13.2 0.0 0.066 12.4 0.0 1.3 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel RsbU_N PF08673.5 gi|15669314|ref|NP_248119.1| - 0.16 11.9 2.4 1.3 9.1 0.0 3.0 3 0 0 3 3 3 0 Phosphoserine phosphatase RsbU, N-terminal domain C5-epim_C PF06662.8 gi|15669315|ref|NP_248120.1| - 1.2e-55 187.7 8.0 1.8e-55 187.1 5.6 1.3 1 0 0 1 1 1 1 D-glucuronyl C5-epimerase C-terminus DUF1680 PF07944.7 gi|15669315|ref|NP_248120.1| - 0.023 12.9 0.9 1.9 6.6 0.0 2.1 2 0 0 2 2 2 0 Putative glycosyl hydrolase of unknown function (DUF1680) DUF3394 PF11874.3 gi|15669315|ref|NP_248120.1| - 0.085 12.3 0.2 0.13 11.7 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3394) Glyco_hydro_88 PF07470.8 gi|15669315|ref|NP_248120.1| - 0.095 11.7 3.4 0.12 11.3 0.1 2.2 2 0 0 2 2 2 0 Glycosyl Hydrolase Family 88 DUF59 PF01883.14 gi|15669316|ref|NP_248121.1| - 1.1e-23 83.0 0.4 1.4e-23 82.6 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF59 DUF411 PF04214.8 gi|15669316|ref|NP_248121.1| - 0.0043 16.5 0.2 0.01 15.3 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function, DUF SBP_bac_5 PF00496.17 gi|15669316|ref|NP_248121.1| - 0.026 13.3 0.0 0.026 13.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle BON PF04972.12 gi|15669316|ref|NP_248121.1| - 0.1 12.3 0.4 0.25 11.1 0.3 1.7 1 0 0 1 1 1 0 BON domain Peptidase_M22 PF00814.20 gi|15669317|ref|NP_248122.1| - 5.2e-91 304.8 0.0 7e-91 304.4 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Pkinase PF00069.20 gi|15669317|ref|NP_248122.1| - 3.7e-07 29.5 0.4 6.1e-07 28.8 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.17 gi|15669317|ref|NP_248122.1| - 7.8e-07 28.6 0.1 1.3e-06 27.8 0.1 1.3 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|15669317|ref|NP_248122.1| - 1.9e-06 27.8 0.0 0.016 14.9 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.9 gi|15669317|ref|NP_248122.1| - 0.00015 20.9 0.2 0.00074 18.6 0.1 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.12 gi|15669317|ref|NP_248122.1| - 0.00029 20.0 0.0 0.00056 19.0 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase CmcH_NodU PF02543.10 gi|15669317|ref|NP_248122.1| - 0.0078 15.3 0.0 0.012 14.7 0.0 1.2 1 0 0 1 1 1 1 Carbamoyltransferase Choline_kinase PF01633.15 gi|15669317|ref|NP_248122.1| - 0.12 11.9 2.0 0.29 10.6 1.2 1.6 1 1 1 2 2 2 0 Choline/ethanolamine kinase FKBP_C PF00254.23 gi|15669317|ref|NP_248122.1| - 0.12 12.3 0.0 0.57 10.2 0.0 2.1 2 0 0 2 2 2 0 FKBP-type peptidyl-prolyl cis-trans isomerase GMP_synt_C PF00958.17 gi|15669318|ref|NP_248123.1| - 1.2e-36 124.3 0.2 3.6e-36 122.7 0.0 1.9 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|15669318|ref|NP_248123.1| - 2.4e-13 49.5 0.2 6.8e-08 31.6 0.0 2.2 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.11 gi|15669318|ref|NP_248123.1| - 1.9e-06 26.7 0.0 0.00014 20.5 0.0 2.1 2 0 0 2 2 2 2 tRNA methyl transferase ThiI PF02568.9 gi|15669318|ref|NP_248123.1| - 2.7e-06 26.9 0.1 6.8e-06 25.6 0.0 1.6 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.16 gi|15669318|ref|NP_248123.1| - 3.2e-06 26.8 0.1 5.8e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|15669318|ref|NP_248123.1| - 7.3e-06 25.4 0.0 0.00073 18.8 0.0 2.2 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.14 gi|15669318|ref|NP_248123.1| - 5.8e-05 22.9 0.0 9.5e-05 22.2 0.0 1.6 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Arginosuc_synth PF00764.14 gi|15669318|ref|NP_248123.1| - 0.00026 20.1 0.1 0.00043 19.4 0.1 1.3 1 0 0 1 1 1 1 Arginosuccinate synthase ATP_bind_3 PF01171.15 gi|15669318|ref|NP_248123.1| - 0.0004 19.9 0.0 0.00064 19.2 0.0 1.4 1 0 0 1 1 1 1 PP-loop family NAD_Gly3P_dh_N PF01210.18 gi|15669318|ref|NP_248123.1| - 0.068 12.8 0.0 0.88 9.2 0.0 2.5 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AAA_25 PF13481.1 gi|15669318|ref|NP_248123.1| - 0.079 12.3 0.1 0.16 11.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain UPF0058 PF01893.11 gi|15669319|ref|NP_248124.1| - 1.3e-30 105.2 6.4 1.8e-30 104.8 4.4 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 DUF4160 PF13711.1 gi|15669319|ref|NP_248124.1| - 0.022 14.6 0.2 0.046 13.5 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4160) UbiD PF01977.11 gi|15669320|ref|NP_248125.1| - 2.2e-104 349.1 0.0 2.7e-104 348.8 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ScpA_ScpB PF02616.9 gi|15669321|ref|NP_248126.1| - 1.1e-57 195.4 16.7 1.3e-57 195.2 11.6 1.0 1 0 0 1 1 1 1 ScpA/B protein DUF615 PF04751.9 gi|15669321|ref|NP_248126.1| - 0.0074 15.9 1.2 0.017 14.7 0.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF615) HSP70 PF00012.15 gi|15669321|ref|NP_248126.1| - 0.034 12.0 10.2 0.038 11.8 7.0 1.1 1 0 0 1 1 1 0 Hsp70 protein Desmo_N PF06771.6 gi|15669321|ref|NP_248126.1| - 0.067 13.1 1.9 0.15 11.9 1.1 1.6 1 1 0 1 1 1 0 Viral Desmoplakin N-terminus Fib_alpha PF08702.5 gi|15669321|ref|NP_248126.1| - 0.075 13.1 6.3 0.098 12.7 3.8 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF908 PF06012.7 gi|15669321|ref|NP_248126.1| - 0.091 12.0 1.7 0.098 11.9 1.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) V_ATPase_I PF01496.14 gi|15669321|ref|NP_248126.1| - 0.13 10.1 6.3 0.15 9.9 4.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PcfK PF14058.1 gi|15669321|ref|NP_248126.1| - 0.33 11.0 16.0 0.6 10.2 11.1 1.4 1 1 0 1 1 1 0 PcfK-like protein Z1 PF10593.4 gi|15669321|ref|NP_248126.1| - 0.6 9.2 3.2 0.94 8.6 2.2 1.4 1 0 0 1 1 1 0 Z1 domain DUF87 PF01935.12 gi|15669321|ref|NP_248126.1| - 0.7 9.6 9.2 2.7 7.7 6.3 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF87 Protocadherin PF08374.6 gi|15669321|ref|NP_248126.1| - 3.4 7.2 9.8 11 5.5 6.8 1.8 1 1 1 2 2 2 0 Protocadherin CDC45 PF02724.9 gi|15669321|ref|NP_248126.1| - 6.5 4.6 12.0 8.9 4.2 8.3 1.1 1 0 0 1 1 1 0 CDC45-like protein MoaC PF01967.16 gi|15669322|ref|NP_248127.1| - 1.2e-55 186.8 4.9 1.4e-55 186.7 3.4 1.0 1 0 0 1 1 1 1 MoaC family DUF3297 PF11730.3 gi|15669322|ref|NP_248127.1| - 0.056 13.1 0.1 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Radical_SAM PF04055.16 gi|15669323|ref|NP_248128.1| - 3.6e-22 79.2 1.2 9.1e-22 77.9 0.1 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|15669323|ref|NP_248128.1| - 7.1e-08 32.3 0.1 2.8e-07 30.4 0.1 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|15669323|ref|NP_248128.1| - 0.0014 18.7 0.4 0.0058 16.7 0.3 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|15669323|ref|NP_248128.1| - 0.031 14.3 0.1 0.095 12.8 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CTP_transf_1 PF01148.15 gi|15669324|ref|NP_248129.1| - 1.2e-13 51.2 20.3 3.6e-08 33.3 9.8 2.3 1 1 1 2 2 2 2 Cytidylyltransferase family DUF3353 PF11833.3 gi|15669324|ref|NP_248129.1| - 1.5 8.2 6.3 5 6.5 3.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3353) PRA1 PF03208.14 gi|15669324|ref|NP_248129.1| - 5.2 6.3 11.8 1 8.6 2.6 2.1 2 0 0 2 2 2 0 PRA1 family protein LEA_2 PF03168.8 gi|15669325|ref|NP_248130.1| - 5.4e-14 52.3 0.2 8.5e-14 51.7 0.1 1.3 1 0 0 1 1 1 1 Late embryogenesis abundant protein Vac7 PF12751.2 gi|15669325|ref|NP_248130.1| - 0.00037 19.4 0.2 0.00058 18.8 0.1 1.2 1 0 0 1 1 1 1 Vacuolar segregation subunit 7 DUF3712 PF12505.3 gi|15669325|ref|NP_248130.1| - 0.0081 16.1 0.9 0.38 10.7 0.0 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF3712) OsmC PF02566.14 gi|15669325|ref|NP_248130.1| - 0.018 15.1 0.1 0.1 12.8 0.0 2.0 2 0 0 2 2 2 0 OsmC-like protein DUF3324 PF11797.3 gi|15669325|ref|NP_248130.1| - 0.048 13.3 0.6 0.14 11.8 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function C-terminal (DUF3324) PepSY_2 PF13670.1 gi|15669325|ref|NP_248130.1| - 0.1 12.5 0.0 0.3 11.0 0.0 1.8 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain DUF1538 PF07556.6 gi|15669325|ref|NP_248130.1| - 0.13 11.3 0.0 0.15 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1538) RNase_P_p30 PF01876.11 gi|15669326|ref|NP_248131.1| - 9.6e-37 125.5 0.2 1.2e-36 125.2 0.1 1.1 1 0 0 1 1 1 1 RNase P subunit p30 AP_endonuc_2 PF01261.19 gi|15669326|ref|NP_248131.1| - 0.011 15.0 0.1 0.28 10.4 0.0 2.1 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel TatD_DNase PF01026.16 gi|15669326|ref|NP_248131.1| - 0.1 11.8 0.2 0.33 10.1 0.1 1.8 1 1 0 1 1 1 0 TatD related DNase 2-ph_phosp PF04029.9 gi|15669327|ref|NP_248132.1| - 1.6e-62 210.4 2.1 2e-62 210.2 1.5 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase DUF116 PF01976.12 gi|15669328|ref|NP_248133.1| - 1e-50 171.2 0.1 1.3e-50 171.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 SpoU_sub_bind PF08032.7 gi|15669328|ref|NP_248133.1| - 0.1 12.7 0.0 0.25 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding Rab5ip PF07019.7 gi|15669328|ref|NP_248133.1| - 0.65 10.1 5.8 1.1 9.4 4.0 1.4 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) ArsA_ATPase PF02374.10 gi|15669329|ref|NP_248134.1| - 4.6e-125 416.7 0.9 5.4e-125 416.4 0.7 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.18 gi|15669329|ref|NP_248134.1| - 5.5e-14 52.0 0.4 1.8e-13 50.3 0.3 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|15669329|ref|NP_248134.1| - 9.4e-07 28.8 0.1 1.2e-05 25.3 0.0 2.4 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|15669329|ref|NP_248134.1| - 7.3e-06 25.5 2.7 0.00092 18.7 0.5 2.7 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.13 gi|15669329|ref|NP_248134.1| - 0.00015 21.0 0.1 0.00048 19.3 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YhjQ PF06564.7 gi|15669329|ref|NP_248134.1| - 0.0006 19.2 0.0 0.002 17.5 0.0 1.7 1 1 1 2 2 2 1 YhjQ protein ArgK PF03308.11 gi|15669329|ref|NP_248134.1| - 0.0012 17.6 0.3 0.0038 16.0 0.1 1.8 2 0 0 2 2 2 1 ArgK protein AAA_25 PF13481.1 gi|15669329|ref|NP_248134.1| - 0.0015 18.0 0.2 0.005 16.2 0.0 1.9 2 1 0 2 2 2 1 AAA domain ParA PF10609.4 gi|15669329|ref|NP_248134.1| - 0.0021 17.8 0.1 0.024 14.5 0.0 2.4 2 0 0 2 2 2 1 ParA/MinD ATPase like AAA_10 PF12846.2 gi|15669329|ref|NP_248134.1| - 0.0027 17.1 0.0 0.0036 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain CTP_synth_N PF06418.9 gi|15669329|ref|NP_248134.1| - 0.015 14.3 2.2 0.32 10.0 0.3 2.2 2 0 0 2 2 2 0 CTP synthase N-terminus ResIII PF04851.10 gi|15669329|ref|NP_248134.1| - 0.019 14.7 0.3 0.071 12.9 0.2 1.9 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit MipZ PF09140.6 gi|15669329|ref|NP_248134.1| - 0.021 13.8 0.8 0.098 11.7 0.2 2.0 1 1 0 2 2 2 0 ATPase MipZ MobB PF03205.9 gi|15669329|ref|NP_248134.1| - 0.024 14.3 0.3 0.072 12.7 0.2 1.8 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PhoH PF02562.11 gi|15669329|ref|NP_248134.1| - 0.026 13.7 0.1 0.086 12.0 0.0 1.8 2 0 0 2 2 2 0 PhoH-like protein DUF815 PF05673.8 gi|15669329|ref|NP_248134.1| - 0.03 13.2 0.5 0.067 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NB-ARC PF00931.17 gi|15669329|ref|NP_248134.1| - 0.033 13.0 0.6 0.088 11.6 0.4 1.6 1 0 0 1 1 1 0 NB-ARC domain AAA_17 PF13207.1 gi|15669329|ref|NP_248134.1| - 0.034 14.9 0.4 0.16 12.8 0.2 2.3 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|15669329|ref|NP_248134.1| - 0.036 13.4 0.0 0.079 12.3 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein ATP_bind_1 PF03029.12 gi|15669329|ref|NP_248134.1| - 0.049 13.1 0.5 0.12 11.8 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_26 PF13500.1 gi|15669329|ref|NP_248134.1| - 0.056 13.0 0.4 0.34 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain MS_channel PF00924.13 gi|15669330|ref|NP_248135.1| - 4.2e-66 222.2 5.6 4.2e-66 222.2 3.9 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel 7TMR-DISM_7TM PF07695.6 gi|15669330|ref|NP_248135.1| - 0.0066 16.1 4.6 0.0066 16.1 3.2 2.1 2 0 0 2 2 2 1 7TM diverse intracellular signalling AflR PF08493.5 gi|15669330|ref|NP_248135.1| - 0.078 12.0 0.0 0.11 11.4 0.0 1.2 1 0 0 1 1 1 0 Aflatoxin regulatory protein SpoVAB PF13782.1 gi|15669330|ref|NP_248135.1| - 0.53 10.2 6.2 0.61 10.0 0.2 2.7 2 1 0 2 2 2 0 Stage V sporulation protein AB CbiG_C PF01890.11 gi|15669331|ref|NP_248136.1| - 2.1e-31 108.6 0.0 3.3e-31 108.0 0.0 1.3 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_N PF11760.3 gi|15669331|ref|NP_248136.1| - 1.7e-23 82.1 0.0 4.5e-23 80.7 0.0 1.7 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal Orthopox_F6 PF06601.7 gi|15669331|ref|NP_248136.1| - 0.0036 17.1 0.5 0.096 12.6 0.1 2.5 2 0 0 2 2 2 1 Orthopoxvirus F6 protein Delta_lysin PF05372.6 gi|15669331|ref|NP_248136.1| - 2.6 7.4 5.4 0.52 9.7 0.1 2.6 3 0 0 3 3 3 0 Delta lysin family DUF1955 PF09205.5 gi|15669332|ref|NP_248137.1| - 0.062 12.8 0.1 0.068 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) DUF4423 PF14394.1 gi|15669332|ref|NP_248137.1| - 0.081 12.4 0.1 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Gp_dh_C PF02800.15 gi|15669333|ref|NP_248138.1| - 1.1e-33 115.9 0.1 1.5e-33 115.4 0.1 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|15669333|ref|NP_248138.1| - 4e-19 69.0 0.2 2e-18 66.7 0.0 2.1 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|15669333|ref|NP_248138.1| - 2.3e-08 34.0 0.2 6.9e-08 32.4 0.1 1.8 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.14 gi|15669333|ref|NP_248138.1| - 0.015 14.4 0.1 0.038 13.1 0.0 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 gi|15669333|ref|NP_248138.1| - 0.025 14.8 0.0 0.05 13.9 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|15669333|ref|NP_248138.1| - 0.06 13.7 0.1 0.16 12.3 0.1 1.8 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|15669333|ref|NP_248138.1| - 0.071 13.1 0.3 0.53 10.2 0.0 2.5 3 0 0 3 3 3 0 TrkA-N domain Pentapeptide_3 PF13576.1 gi|15669334|ref|NP_248139.1| - 4.5e-13 48.8 54.7 1.3e-06 28.1 6.5 4.8 2 1 5 7 7 7 5 Pentapeptide repeats (9 copies) Pentapeptide_4 PF13599.1 gi|15669334|ref|NP_248139.1| - 1 9.2 22.1 1.1e+03 -0.5 15.3 3.9 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) TFIIS_C PF01096.13 gi|15669335|ref|NP_248140.1| - 1.1e-20 72.9 7.8 1.1e-20 72.9 5.4 3.0 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.11 gi|15669335|ref|NP_248140.1| - 4.1e-14 51.9 2.3 4.1e-14 51.9 1.6 3.5 4 0 0 4 4 4 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.2 gi|15669335|ref|NP_248140.1| - 1.1e-05 25.1 15.3 3.4e-05 23.5 4.1 2.7 2 1 1 3 3 3 1 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|15669335|ref|NP_248140.1| - 7.7e-05 21.7 13.4 0.0059 15.7 1.3 3.3 3 0 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|15669335|ref|NP_248140.1| - 0.00011 21.7 16.5 0.037 13.7 0.5 4.3 3 1 1 4 4 4 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15669335|ref|NP_248140.1| - 0.00012 21.5 16.7 0.031 13.8 0.3 4.3 3 1 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15669335|ref|NP_248140.1| - 0.00022 20.5 16.9 0.015 14.8 1.8 3.4 3 0 0 3 3 3 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|15669335|ref|NP_248140.1| - 0.00083 18.9 12.4 0.027 14.1 3.5 2.5 2 1 0 2 2 2 2 Putative transposase DNA-binding domain UPF0547 PF10571.4 gi|15669335|ref|NP_248140.1| - 0.00086 18.9 15.2 0.28 10.9 0.0 4.7 5 0 0 5 5 5 1 Uncharacterised protein family UPF0547 DZR PF12773.2 gi|15669335|ref|NP_248140.1| - 0.0027 17.4 12.8 0.074 12.8 0.6 2.7 2 1 0 2 2 2 2 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|15669335|ref|NP_248140.1| - 0.0066 15.8 9.3 1.7 8.1 0.0 3.5 3 0 0 3 3 3 1 DNA directed RNA polymerase, 7 kDa subunit Elf1 PF05129.8 gi|15669335|ref|NP_248140.1| - 0.013 15.1 10.4 0.12 12.0 1.2 2.8 2 2 0 2 2 2 0 Transcription elongation factor Elf1 like Auto_anti-p27 PF06677.7 gi|15669335|ref|NP_248140.1| - 0.015 15.0 4.7 0.015 15.0 3.3 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF2387 PF09526.5 gi|15669335|ref|NP_248140.1| - 0.032 14.1 15.9 1.1 9.1 1.5 3.1 1 1 2 3 3 3 0 Probable metal-binding protein (DUF2387) Cys_rich_CPCC PF14206.1 gi|15669335|ref|NP_248140.1| - 0.046 13.2 0.3 0.046 13.2 0.2 2.6 2 1 0 2 2 2 0 Cysteine-rich CPCC zinc-ribbons_6 PF07191.7 gi|15669335|ref|NP_248140.1| - 0.065 13.0 1.0 0.065 13.0 0.7 2.7 2 1 0 2 2 2 0 zinc-ribbons TF_Zn_Ribbon PF08271.7 gi|15669335|ref|NP_248140.1| - 0.075 12.3 14.6 0.58 9.5 2.9 3.3 2 2 0 2 2 2 0 TFIIB zinc-binding Ribosomal_L37e PF01907.14 gi|15669335|ref|NP_248140.1| - 0.13 12.1 10.3 2.3 8.0 0.2 3.2 2 1 1 3 3 3 0 Ribosomal protein L37e HypA PF01155.14 gi|15669335|ref|NP_248140.1| - 0.13 11.9 11.7 0.36 10.5 0.7 3.0 1 1 2 3 3 3 0 Hydrogenase expression/synthesis hypA family zf-C4_Topoisom PF01396.14 gi|15669335|ref|NP_248140.1| - 0.15 11.5 14.3 0.23 10.9 1.0 3.4 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger IBR PF01485.16 gi|15669335|ref|NP_248140.1| - 0.25 11.2 14.5 0.2 11.5 0.7 3.0 2 1 0 2 2 2 0 IBR domain Zn-ribbon_8 PF09723.5 gi|15669335|ref|NP_248140.1| - 0.43 10.5 19.4 2.1 8.3 1.0 4.4 3 1 0 4 4 4 0 Zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|15669335|ref|NP_248140.1| - 0.45 10.0 14.5 7.7 6.1 0.7 3.9 3 1 0 3 3 3 0 A2L zinc ribbon domain RecR PF02132.10 gi|15669335|ref|NP_248140.1| - 0.76 9.2 10.6 0.43 10.0 1.4 3.7 3 1 0 3 3 3 0 RecR protein Terminase_GpA PF05876.7 gi|15669335|ref|NP_248140.1| - 0.92 7.7 10.7 0.042 12.2 3.8 1.4 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) Desulfoferrod_N PF06397.7 gi|15669335|ref|NP_248140.1| - 1.1 8.6 8.7 2.7 7.4 0.2 2.8 3 0 0 3 3 2 0 Desulfoferrodoxin, N-terminal domain Nudix_N_2 PF14803.1 gi|15669335|ref|NP_248140.1| - 1.4 8.6 11.0 18 5.1 0.1 4.0 4 0 0 4 4 4 0 Nudix N-terminal zf-ISL3 PF14690.1 gi|15669335|ref|NP_248140.1| - 1.6 8.8 13.5 4.8 7.3 0.2 3.9 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-HIT PF04438.11 gi|15669335|ref|NP_248140.1| - 1.7 8.3 16.3 8.5 6.1 0.5 4.3 4 0 0 4 4 4 0 HIT zinc finger zf-RING_5 PF14634.1 gi|15669335|ref|NP_248140.1| - 1.7 8.3 10.9 15 5.4 1.1 3.2 3 0 0 3 3 3 0 zinc-RING finger domain Rubredoxin PF00301.15 gi|15669335|ref|NP_248140.1| - 1.8 8.5 16.7 7.5 6.5 0.3 4.6 3 1 1 4 4 4 0 Rubredoxin Ribosomal_L32p PF01783.18 gi|15669335|ref|NP_248140.1| - 2.3 8.4 6.1 46 4.2 0.5 3.3 3 1 0 3 3 3 0 Ribosomal L32p protein family VP_N-CPKC PF11475.3 gi|15669335|ref|NP_248140.1| - 2.7 7.6 9.3 9.1 5.9 0.3 3.3 3 0 0 3 3 3 0 Virion protein N terminal domain zf-Mss51 PF13824.1 gi|15669335|ref|NP_248140.1| - 3.1 7.7 15.3 9.7 6.1 1.5 3.2 1 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-TFIIB PF13453.1 gi|15669335|ref|NP_248140.1| - 5 6.4 15.6 6.5 6.0 0.2 3.7 3 1 0 3 3 3 0 Transcription factor zinc-finger zf-DNA_Pol PF08996.5 gi|15669335|ref|NP_248140.1| - 5.9 6.1 9.5 0.13 11.6 0.8 2.2 1 1 1 2 2 2 0 DNA Polymerase alpha zinc finger PolC_DP2 PF03833.8 gi|15669335|ref|NP_248140.1| - 9.2 3.7 8.2 0.71 7.4 1.5 1.8 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 NUDIX PF00293.23 gi|15669336|ref|NP_248141.1| - 1e-23 83.4 0.0 1.4e-23 83.0 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|15669336|ref|NP_248141.1| - 0.011 15.1 0.0 0.025 13.9 0.0 1.7 1 1 0 1 1 1 0 NUDIX domain DUF99 PF01949.11 gi|15669337|ref|NP_248142.1| - 1.2e-66 223.3 0.4 1.4e-66 223.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 DUF1268 PF06896.6 gi|15669338|ref|NP_248143.1| - 0.018 15.3 0.9 0.026 14.8 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1268) DUF2656 PF10847.3 gi|15669338|ref|NP_248143.1| - 0.079 12.8 0.1 1.9 8.3 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2656) FTA4 PF13093.1 gi|15669338|ref|NP_248143.1| - 0.21 11.0 4.4 0.28 10.6 3.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 AAA_23 PF13476.1 gi|15669338|ref|NP_248143.1| - 2.2 8.5 15.8 2.6 8.3 10.9 1.0 1 0 0 1 1 1 0 AAA domain CTK3_C PF12350.3 gi|15669338|ref|NP_248143.1| - 2.4 8.2 12.2 0.18 11.8 1.0 2.1 1 1 1 2 2 2 0 CTD kinase subunit gamma CTK3 C-terminus Ribosomal_L37 PF08561.5 gi|15669338|ref|NP_248143.1| - 4.6 6.8 11.4 1.6e+02 1.9 7.6 2.3 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L37 INCENP_ARK-bind PF03941.10 gi|15669339|ref|NP_248144.1| - 0.084 12.7 0.2 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region RRF PF01765.14 gi|15669339|ref|NP_248144.1| - 0.094 12.1 2.8 0.12 11.7 1.9 1.1 1 0 0 1 1 1 0 Ribosome recycling factor Tox-ART-HYE1 PF15634.1 gi|15669339|ref|NP_248144.1| - 0.1 11.5 1.5 0.12 11.3 1.1 1.0 1 0 0 1 1 1 0 HYE1 signature containing ADP-ribosyltransferase Ivy PF08816.6 gi|15669340|ref|NP_248145.1| - 0.054 13.4 1.5 0.06 13.3 1.0 1.2 1 0 0 1 1 1 0 Inhibitor of vertebrate lysozyme (Ivy) Phage_P2_GpE PF06528.7 gi|15669340|ref|NP_248145.1| - 0.37 10.2 2.2 0.51 9.8 1.1 1.5 1 1 1 2 2 2 0 Phage P2 GpE RRP14 PF15459.1 gi|15669340|ref|NP_248145.1| - 0.95 9.5 6.8 1.5 8.9 4.7 1.3 1 0 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 HD PF01966.17 gi|15669341|ref|NP_248146.1| - 2e-19 69.8 0.2 4.8e-19 68.5 0.1 1.7 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 gi|15669341|ref|NP_248146.1| - 0.00051 19.3 0.0 0.0012 18.1 0.0 1.6 1 0 0 1 1 1 1 HDOD domain HD_3 PF13023.1 gi|15669341|ref|NP_248146.1| - 0.033 13.9 0.2 5.1 6.8 0.0 2.5 2 0 0 2 2 2 0 HD domain TrmB PF01978.14 gi|15669341|ref|NP_248146.1| - 0.062 13.0 0.0 0.18 11.5 0.0 1.9 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Radical_SAM_N PF08497.5 gi|15669342|ref|NP_248147.1| - 1.7e-116 388.4 0.2 2.6e-116 387.8 0.2 1.3 1 0 0 1 1 1 1 Radical SAM N-terminal Radical_SAM PF04055.16 gi|15669342|ref|NP_248147.1| - 3.2e-13 50.1 2.8 1.3e-12 48.2 0.7 2.6 3 0 0 3 3 3 1 Radical SAM superfamily DUF3362 PF11842.3 gi|15669342|ref|NP_248147.1| - 1.3e-08 34.8 0.1 2.4e-08 34.0 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) B12-binding PF02310.14 gi|15669342|ref|NP_248147.1| - 0.11 12.4 0.0 20 5.0 0.0 2.5 2 0 0 2 2 2 0 B12 binding domain AzlD PF05437.7 gi|15669343|ref|NP_248148.1| - 1e-14 54.2 2.7 1.2e-14 54.0 1.9 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) DUF1212 PF06738.7 gi|15669343|ref|NP_248148.1| - 0.0047 16.4 0.9 0.16 11.4 0.4 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1212) Ost4 PF10215.4 gi|15669343|ref|NP_248148.1| - 0.12 11.8 0.1 0.12 11.8 0.1 2.0 2 0 0 2 2 2 0 Oligosaccaryltransferase FUSC PF04632.7 gi|15669344|ref|NP_248149.1| - 1.3 7.4 4.8 1.3 7.3 3.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family AAA PF00004.24 gi|15669345|ref|NP_248150.1| - 1.6e-102 338.9 1.3 1e-49 168.1 0.0 3.5 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|15669345|ref|NP_248150.1| - 1.4e-30 105.0 0.0 7.8e-30 102.6 0.0 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|15669345|ref|NP_248150.1| - 2.2e-17 63.5 0.1 2.1e-08 34.2 0.0 3.1 3 1 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|15669345|ref|NP_248150.1| - 3.1e-17 62.3 0.0 3.9e-08 32.6 0.0 2.7 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|15669345|ref|NP_248150.1| - 1.4e-15 57.8 0.0 9.7e-08 32.2 0.0 3.4 3 0 0 3 3 3 2 AAA ATPase domain CDC48_2 PF02933.12 gi|15669345|ref|NP_248150.1| - 3.2e-15 55.5 1.0 2.3e-14 52.7 0.5 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.9 gi|15669345|ref|NP_248150.1| - 7.2e-15 54.9 2.0 3.4e-06 26.8 0.0 4.3 3 3 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|15669345|ref|NP_248150.1| - 3.8e-14 53.5 1.9 2.5e-06 28.3 0.0 4.1 2 1 1 3 3 3 2 AAA domain AAA_22 PF13401.1 gi|15669345|ref|NP_248150.1| - 1.9e-13 50.6 3.3 0.00013 22.1 0.0 5.3 3 2 0 3 3 3 2 AAA domain AAA_33 PF13671.1 gi|15669345|ref|NP_248150.1| - 6.1e-13 48.8 0.0 4.3e-06 26.6 0.0 2.6 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.8 gi|15669345|ref|NP_248150.1| - 1.3e-12 47.2 4.0 8.8e-06 24.6 0.0 3.3 3 0 0 3 3 2 2 TIP49 C-terminus AAA_14 PF13173.1 gi|15669345|ref|NP_248150.1| - 1.7e-12 47.3 0.0 3.9e-05 23.5 0.0 3.4 3 0 0 3 3 3 2 AAA domain Zeta_toxin PF06414.7 gi|15669345|ref|NP_248150.1| - 1.4e-11 43.9 0.8 2.8e-05 23.3 0.0 3.7 3 1 0 4 4 3 2 Zeta toxin IstB_IS21 PF01695.12 gi|15669345|ref|NP_248150.1| - 1.5e-09 37.5 0.0 0.00097 18.5 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_19 PF13245.1 gi|15669345|ref|NP_248150.1| - 1.7e-09 37.2 0.9 0.0011 18.6 0.0 3.2 3 0 0 3 3 2 2 Part of AAA domain Vps4_C PF09336.5 gi|15669345|ref|NP_248150.1| - 3.8e-09 36.3 2.3 7.3e-06 25.7 0.0 3.3 3 0 0 3 3 2 2 Vps4 C terminal oligomerisation domain AAA_28 PF13521.1 gi|15669345|ref|NP_248150.1| - 1.1e-08 35.2 0.0 0.0011 18.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|15669345|ref|NP_248150.1| - 4.9e-08 32.6 0.1 0.014 14.8 0.0 4.0 2 2 0 2 2 2 2 Sigma-54 interaction domain DUF815 PF05673.8 gi|15669345|ref|NP_248150.1| - 9.6e-08 31.2 0.0 0.00082 18.3 0.0 2.8 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.1 gi|15669345|ref|NP_248150.1| - 9.6e-08 32.1 0.0 0.018 15.0 0.0 2.7 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_18 PF13238.1 gi|15669345|ref|NP_248150.1| - 3.3e-07 30.6 6.2 0.0073 16.6 0.0 4.1 4 0 0 4 4 3 2 AAA domain Mg_chelatase PF01078.16 gi|15669345|ref|NP_248150.1| - 3.3e-07 29.6 0.4 0.035 13.2 0.1 3.0 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|15669345|ref|NP_248150.1| - 9e-07 28.4 8.8 0.24 10.7 0.5 4.5 2 2 1 3 3 3 3 AAA domain PhoH PF02562.11 gi|15669345|ref|NP_248150.1| - 1.1e-06 28.0 2.6 0.12 11.5 0.0 3.6 3 0 0 3 3 3 2 PhoH-like protein RNA_helicase PF00910.17 gi|15669345|ref|NP_248150.1| - 4.7e-06 26.7 0.0 0.22 11.7 0.0 3.0 2 0 0 2 2 2 2 RNA helicase AAA_3 PF07726.6 gi|15669345|ref|NP_248150.1| - 7.3e-06 25.6 0.0 0.13 11.9 0.0 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|15669345|ref|NP_248150.1| - 9.8e-06 24.6 1.6 0.28 10.0 0.0 3.9 4 0 0 4 4 3 2 NB-ARC domain ABC_tran PF00005.22 gi|15669345|ref|NP_248150.1| - 1.2e-05 25.5 0.1 0.25 11.6 0.0 3.2 3 0 0 3 3 2 2 ABC transporter NACHT PF05729.7 gi|15669345|ref|NP_248150.1| - 0.00016 21.3 1.5 0.36 10.4 0.0 3.6 4 0 0 4 4 3 1 NACHT domain AAA_24 PF13479.1 gi|15669345|ref|NP_248150.1| - 0.00017 21.2 1.4 0.44 10.0 0.0 3.3 3 0 0 3 3 2 2 AAA domain KaiC PF06745.8 gi|15669345|ref|NP_248150.1| - 0.00017 20.7 15.1 0.42 9.7 0.0 5.5 3 2 2 5 5 5 2 KaiC ATP-synt_ab PF00006.20 gi|15669345|ref|NP_248150.1| - 0.00021 20.8 0.0 0.96 8.9 0.0 3.0 2 1 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain ResIII PF04851.10 gi|15669345|ref|NP_248150.1| - 0.00058 19.7 1.7 0.35 10.6 0.0 3.4 3 0 0 3 3 2 1 Type III restriction enzyme, res subunit UPF0079 PF02367.12 gi|15669345|ref|NP_248150.1| - 0.00061 19.4 0.2 2 8.0 0.0 3.0 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_30 PF13604.1 gi|15669345|ref|NP_248150.1| - 0.0013 18.3 0.1 1.1 8.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain Parvo_NS1 PF01057.12 gi|15669345|ref|NP_248150.1| - 0.0013 17.6 0.0 1.3 7.8 0.0 2.5 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 DUF2075 PF09848.4 gi|15669345|ref|NP_248150.1| - 0.0016 17.5 2.0 0.57 9.0 0.0 3.0 3 0 0 3 3 3 1 Uncharacterized conserved protein (DUF2075) SKI PF01202.17 gi|15669345|ref|NP_248150.1| - 0.0026 17.6 1.0 1.2 8.9 0.0 2.9 3 0 0 3 3 2 1 Shikimate kinase AAA_10 PF12846.2 gi|15669345|ref|NP_248150.1| - 0.0054 16.2 9.9 0.39 10.1 0.2 4.1 4 1 0 4 4 3 1 AAA-like domain APS_kinase PF01583.15 gi|15669345|ref|NP_248150.1| - 0.0058 16.2 0.1 2.2 7.9 0.0 3.2 3 0 0 3 3 3 1 Adenylylsulphate kinase Baculo_PEP_C PF04513.7 gi|15669345|ref|NP_248150.1| - 0.0066 16.2 5.3 0.06 13.1 2.9 2.7 2 1 0 2 2 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus IPT PF01745.11 gi|15669345|ref|NP_248150.1| - 0.0095 15.1 0.2 1.7 7.7 0.0 2.6 2 0 0 2 2 2 1 Isopentenyl transferase Viral_helicase1 PF01443.13 gi|15669345|ref|NP_248150.1| - 0.01 15.3 0.0 0.78 9.2 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Molydop_binding PF01568.16 gi|15669345|ref|NP_248150.1| - 0.012 15.4 0.0 0.05 13.4 0.0 2.0 2 0 0 2 2 1 0 Molydopterin dinucleotide binding domain Allexi_40kDa PF05549.6 gi|15669345|ref|NP_248150.1| - 0.012 14.8 1.3 0.024 13.9 0.9 1.5 1 0 0 1 1 1 0 Allexivirus 40kDa protein Toxin_52 PF15605.1 gi|15669345|ref|NP_248150.1| - 0.015 15.2 1.3 2.8 7.8 0.0 3.1 2 0 0 2 2 2 0 Putative toxin 52 PduV-EutP PF10662.4 gi|15669345|ref|NP_248150.1| - 0.016 14.6 0.3 7.3 6.0 0.0 3.1 4 0 0 4 4 2 0 Ethanolamine utilisation - propanediol utilisation AFG1_ATPase PF03969.11 gi|15669345|ref|NP_248150.1| - 0.017 13.9 0.1 3.9 6.1 0.0 2.9 3 0 0 3 3 3 0 AFG1-like ATPase MobB PF03205.9 gi|15669345|ref|NP_248150.1| - 0.023 14.3 0.3 2.4 7.8 0.0 3.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF1677 PF07911.8 gi|15669345|ref|NP_248150.1| - 0.034 14.3 0.0 0.74 10.0 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1677) AAA_29 PF13555.1 gi|15669345|ref|NP_248150.1| - 0.036 13.5 0.0 10 5.7 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain cobW PF02492.14 gi|15669345|ref|NP_248150.1| - 0.055 12.9 3.8 1.3 8.3 0.0 3.3 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Baculo_p24 PF05073.7 gi|15669345|ref|NP_248150.1| - 0.056 13.0 5.8 0.16 11.5 4.0 1.7 1 0 0 1 1 1 0 Baculovirus P24 capsid protein MMR_HSR1 PF01926.18 gi|15669345|ref|NP_248150.1| - 0.089 12.7 4.2 1.1 9.2 0.0 3.4 3 2 0 3 3 2 0 50S ribosome-binding GTPase Glutaredoxin2_C PF04399.8 gi|15669345|ref|NP_248150.1| - 0.11 12.1 6.0 0.063 12.8 1.2 2.7 1 1 2 3 3 3 0 Glutaredoxin 2, C terminal domain Reo_sigmaC PF04582.7 gi|15669345|ref|NP_248150.1| - 0.14 11.3 2.4 0.45 9.6 0.8 2.1 1 1 1 2 2 2 0 Reovirus sigma C capsid protein AAA_11 PF13086.1 gi|15669345|ref|NP_248150.1| - 0.21 11.1 9.2 7.1 6.1 0.0 3.4 2 1 0 2 2 2 0 AAA domain WXG100 PF06013.7 gi|15669345|ref|NP_248150.1| - 0.36 10.8 2.6 11 6.0 0.1 4.3 5 1 0 6 6 4 0 Proteins of 100 residues with WXG DUF885 PF05960.6 gi|15669345|ref|NP_248150.1| - 0.55 9.3 6.1 0.91 8.6 4.2 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) AAA_13 PF13166.1 gi|15669345|ref|NP_248150.1| - 0.86 7.9 19.2 0.28 9.5 11.3 1.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|15669345|ref|NP_248150.1| - 0.91 9.2 13.8 5 6.8 0.0 5.0 4 2 2 6 6 4 0 NTPase APG6 PF04111.7 gi|15669345|ref|NP_248150.1| - 2.9 6.8 13.9 0.44 9.5 6.8 1.7 2 0 0 2 2 1 0 Autophagy protein Apg6 NAAA-beta PF15508.1 gi|15669345|ref|NP_248150.1| - 3.3 8.1 6.0 49 4.3 0.3 4.5 3 1 2 5 5 4 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Syntaxin-6_N PF09177.6 gi|15669345|ref|NP_248150.1| - 3.4 8.1 11.6 20 5.6 2.4 3.7 2 1 2 4 4 3 0 Syntaxin 6, N-terminal DUF2203 PF09969.4 gi|15669345|ref|NP_248150.1| - 4 7.6 10.5 0.55 10.4 1.7 3.4 2 1 2 4 4 3 0 Uncharacterized conserved protein (DUF2203) GrpE PF01025.14 gi|15669345|ref|NP_248150.1| - 6.1 6.3 18.1 12 5.4 10.1 3.0 2 1 0 2 2 2 0 GrpE TBPIP PF07106.8 gi|15669345|ref|NP_248150.1| - 6.5 6.2 24.8 0.77 9.2 12.2 3.0 3 1 1 4 4 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) eIF-5_eIF-2B PF01873.12 gi|15669346|ref|NP_248151.1| - 5.5e-06 26.0 6.7 0.0081 15.8 0.3 2.1 2 0 0 2 2 2 2 Domain found in IF2B/IF5 Elf1 PF05129.8 gi|15669346|ref|NP_248151.1| - 0.00012 21.7 7.9 0.015 14.9 0.9 2.2 2 0 0 2 2 2 2 Transcription elongation factor Elf1 like DZR PF12773.2 gi|15669346|ref|NP_248151.1| - 0.00018 21.2 5.0 0.095 12.5 0.4 2.3 2 0 0 2 2 2 2 Double zinc ribbon DUF2387 PF09526.5 gi|15669346|ref|NP_248151.1| - 0.001 18.9 5.1 0.091 12.6 0.3 2.2 2 0 0 2 2 2 2 Probable metal-binding protein (DUF2387) PDCD2_C PF04194.8 gi|15669346|ref|NP_248151.1| - 0.0051 16.4 2.2 0.34 10.4 0.1 2.3 1 1 1 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain C1_1 PF00130.17 gi|15669346|ref|NP_248151.1| - 0.0055 16.4 9.0 0.083 12.6 0.9 2.3 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn_Tnp_IS1595 PF12760.2 gi|15669346|ref|NP_248151.1| - 0.0061 16.3 11.3 0.52 10.1 0.1 3.8 1 1 3 4 4 4 2 Transposase zinc-ribbon domain zf-CHY PF05495.7 gi|15669346|ref|NP_248151.1| - 0.0075 16.4 8.0 0.54 10.4 0.9 2.2 2 0 0 2 2 2 2 CHY zinc finger Zn-ribbon_8 PF09723.5 gi|15669346|ref|NP_248151.1| - 0.01 15.7 7.5 0.32 10.9 0.4 2.7 2 2 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|15669346|ref|NP_248151.1| - 0.011 14.8 9.7 0.19 10.9 0.2 3.7 4 0 0 4 4 4 0 zinc-ribbon domain NMD3 PF04981.8 gi|15669346|ref|NP_248151.1| - 0.012 14.7 11.5 0.079 12.0 1.4 2.1 1 1 1 2 2 2 0 NMD3 family Baculo_ME53 PF06061.6 gi|15669346|ref|NP_248151.1| - 0.013 14.4 12.9 0.059 12.3 2.2 2.2 1 1 1 2 2 2 0 Baculoviridae ME53 Lar_restr_allev PF14354.1 gi|15669346|ref|NP_248151.1| - 0.036 14.3 6.4 4.4 7.6 4.4 2.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar CPSase_L_D3 PF02787.14 gi|15669346|ref|NP_248151.1| - 0.036 13.8 0.1 0.29 10.8 0.0 1.9 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SNAPc_SNAP43 PF09808.4 gi|15669346|ref|NP_248151.1| - 0.036 13.7 0.1 0.061 12.9 0.1 1.3 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Sgf11 PF08209.6 gi|15669346|ref|NP_248151.1| - 0.037 13.3 11.0 3 7.2 0.2 4.1 4 0 0 4 4 4 0 Sgf11 (transcriptional regulation protein) DUF35_N PF12172.3 gi|15669346|ref|NP_248151.1| - 0.039 13.8 6.4 1.7 8.6 0.2 3.3 4 0 0 4 4 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-CCHC PF00098.18 gi|15669346|ref|NP_248151.1| - 0.043 13.7 20.4 2.1 8.4 0.4 4.2 4 0 0 4 4 4 0 Zinc knuckle C1_4 PF07975.7 gi|15669346|ref|NP_248151.1| - 0.046 13.7 10.8 0.44 10.6 1.1 2.2 2 0 0 2 2 2 0 TFIIH C1-like domain DNA_RNApol_7kD PF03604.8 gi|15669346|ref|NP_248151.1| - 0.061 12.7 13.4 0.35 10.3 2.7 3.1 2 2 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-CCHC_6 PF15288.1 gi|15669346|ref|NP_248151.1| - 0.075 12.7 5.5 1.9 8.2 0.5 2.7 2 0 0 2 2 2 0 Zinc knuckle zf-MYND PF01753.13 gi|15669346|ref|NP_248151.1| - 0.11 12.3 10.6 0.56 10.1 1.9 2.5 2 0 0 2 2 2 0 MYND finger zinc_ribbon_2 PF13240.1 gi|15669346|ref|NP_248151.1| - 0.24 10.9 14.1 1.2 8.6 0.1 3.9 3 1 0 3 3 3 0 zinc-ribbon domain DUF164 PF02591.10 gi|15669346|ref|NP_248151.1| - 0.29 11.0 5.1 6.8 6.6 0.0 2.7 3 0 0 3 3 2 0 Putative zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|15669346|ref|NP_248151.1| - 0.31 10.7 11.7 3.4 7.3 1.4 3.4 2 2 2 4 4 4 0 Putative transposase DNA-binding domain Herpes_UL49_1 PF03117.9 gi|15669346|ref|NP_248151.1| - 0.41 9.6 7.3 1.6 7.7 0.6 2.1 1 1 1 2 2 2 0 UL49 family Cytochrom_c3_2 PF14537.1 gi|15669346|ref|NP_248151.1| - 0.51 10.7 4.9 1.1 9.6 3.4 1.6 1 1 0 1 1 1 0 Cytochrome c3 zinc_ribbon_4 PF13717.1 gi|15669346|ref|NP_248151.1| - 0.72 9.5 16.2 2 8.1 2.4 3.6 2 2 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 gi|15669346|ref|NP_248151.1| - 0.78 9.4 9.3 4.4 7.0 0.6 2.6 1 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Ribosomal_L32p PF01783.18 gi|15669346|ref|NP_248151.1| - 0.79 9.9 7.6 5.3 7.3 0.0 3.7 3 1 0 3 3 3 0 Ribosomal L32p protein family DUF581 PF04570.9 gi|15669346|ref|NP_248151.1| - 0.86 8.9 8.3 1.9 7.8 0.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF581) zinc_ribbon_5 PF13719.1 gi|15669346|ref|NP_248151.1| - 0.88 9.2 15.7 3.4 7.3 2.5 3.6 2 2 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.1 gi|15669346|ref|NP_248151.1| - 1.7 8.9 9.6 0.73 10.1 0.5 2.9 2 1 1 3 3 3 0 Recombinase zinc beta ribbon domain TFIIS_C PF01096.13 gi|15669346|ref|NP_248151.1| - 1.7 8.3 15.4 4.2 7.0 0.1 4.1 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS) zf-HYPF PF07503.7 gi|15669346|ref|NP_248151.1| - 2 7.8 9.6 0.31 10.4 0.5 3.2 3 0 0 3 3 3 0 HypF finger DUF1847 PF08901.6 gi|15669346|ref|NP_248151.1| - 2.7 7.4 7.0 0.21 11.0 0.8 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1847) DUF1451 PF07295.6 gi|15669346|ref|NP_248151.1| - 2.8 7.7 10.3 5 6.8 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1451) Cytochrom_CIII PF02085.11 gi|15669346|ref|NP_248151.1| - 3.9 7.6 7.8 27 4.9 5.3 2.0 1 1 0 1 1 1 0 Class III cytochrome C family Ribosomal_S27e PF01667.12 gi|15669346|ref|NP_248151.1| - 4.8 6.8 9.0 11 5.6 0.9 2.5 2 0 0 2 2 2 0 Ribosomal protein S27 DUF2082 PF09855.4 gi|15669346|ref|NP_248151.1| - 7.1 6.5 12.9 0.65 9.8 0.2 3.1 2 2 1 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) IBR PF01485.16 gi|15669346|ref|NP_248151.1| - 9.3 6.2 16.4 36 4.3 0.3 4.1 2 2 1 3 3 3 0 IBR domain zinc_ribbon_6 PF14599.1 gi|15669346|ref|NP_248151.1| - 9.8 6.0 11.6 1.5 8.6 0.6 3.0 2 2 1 3 3 3 0 Zinc-ribbon ATP_bind_3 PF01171.15 gi|15669347|ref|NP_248152.1| - 4.9e-16 58.7 0.0 2.3e-15 56.5 0.0 1.9 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|15669347|ref|NP_248152.1| - 3.7e-05 22.4 0.1 5.3e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase RecR PF02132.10 gi|15669347|ref|NP_248152.1| - 4.7e-05 22.7 1.9 4.7e-05 22.7 1.3 2.9 3 0 0 3 3 3 1 RecR protein PAPS_reduct PF01507.14 gi|15669347|ref|NP_248152.1| - 6.6e-05 22.7 0.0 0.00027 20.8 0.0 1.9 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.12 gi|15669347|ref|NP_248152.1| - 0.039 12.8 0.0 0.069 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD synthase Asn_synthase PF00733.16 gi|15669347|ref|NP_248152.1| - 0.079 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase tRNA_anti-codon PF01336.20 gi|15669348|ref|NP_248153.1| - 6.8e-54 179.6 19.4 1.9e-23 82.0 0.5 6.2 5 1 1 6 6 6 4 OB-fold nucleic acid binding domain Rep_fac-A_C PF08646.5 gi|15669348|ref|NP_248153.1| - 1.9e-13 50.3 0.3 1.2e-09 38.0 0.0 4.5 4 1 0 4 4 4 1 Replication factor-A C terminal domain DUF1967 PF09269.6 gi|15669348|ref|NP_248153.1| - 0.0013 18.3 3.9 3.4 7.3 0.0 4.9 5 0 0 5 5 5 1 Domain of unknown function (DUF1967) DUF3127 PF11325.3 gi|15669348|ref|NP_248153.1| - 0.0014 18.5 2.1 0.45 10.5 0.1 3.7 4 0 0 4 4 4 1 Domain of unknown function (DUF3127) POT1 PF02765.12 gi|15669348|ref|NP_248153.1| - 0.045 13.6 0.1 1.2 8.9 0.0 2.4 2 0 0 2 2 2 0 Telomeric single stranded DNA binding POT1/CDC13 CpXC PF14353.1 gi|15669348|ref|NP_248153.1| - 0.056 13.4 0.2 0.18 11.7 0.0 1.9 1 1 0 1 1 1 0 CpXC protein Molydop_binding PF01568.16 gi|15669348|ref|NP_248153.1| - 0.059 13.2 5.4 28 4.5 0.0 5.0 6 0 0 6 6 6 0 Molydopterin dinucleotide binding domain RNA_pol_Rpb5_C PF01191.14 gi|15669348|ref|NP_248153.1| - 0.14 11.8 2.4 6 6.5 0.0 4.1 4 0 0 4 4 4 0 RNA polymerase Rpb5, C-terminal domain NfeD PF01957.13 gi|15669348|ref|NP_248153.1| - 0.23 11.5 5.0 0.29 11.2 0.1 3.2 4 0 0 4 4 4 0 NfeD-like C-terminal, partner-binding Desulfoferrod_N PF06397.7 gi|15669348|ref|NP_248153.1| - 0.35 10.3 3.2 9.4 5.7 1.3 3.5 3 1 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain A2L_zn_ribbon PF08792.5 gi|15669348|ref|NP_248153.1| - 0.77 9.2 3.9 0.63 9.5 0.5 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain UPF0547 PF10571.4 gi|15669348|ref|NP_248153.1| - 0.87 9.3 3.2 2 8.1 2.2 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Amidase PF01425.16 gi|15669349|ref|NP_248154.1| - 5.8e-128 427.4 0.0 6.5e-128 427.3 0.0 1.0 1 0 0 1 1 1 1 Amidase PRKCSH-like PF12999.2 gi|15669349|ref|NP_248154.1| - 3.1 7.3 5.0 4.6 6.7 0.1 2.4 2 0 0 2 2 2 0 Glucosidase II beta subunit-like Ribosomal_L2 PF00181.18 gi|15669350|ref|NP_248155.1| - 0.1 12.5 0.6 0.38 10.7 0.1 2.3 1 1 1 2 2 2 0 Ribosomal Proteins L2, RNA binding domain Metallophos_2 PF12850.2 gi|15669351|ref|NP_248156.1| - 4.6e-17 62.2 0.1 1e-16 61.1 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15669351|ref|NP_248156.1| - 1.7e-11 43.8 0.2 2.5e-11 43.3 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|15669351|ref|NP_248156.1| - 4.8e-08 32.4 0.0 8.9e-07 28.3 0.0 2.3 1 1 1 2 2 2 1 Metallophosphoesterase, calcineurin superfamily Lactamase_B_3 PF13483.1 gi|15669352|ref|NP_248157.1| - 1.8e-21 76.5 0.1 2.3e-21 76.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|15669352|ref|NP_248157.1| - 1.2e-15 57.5 0.0 1.6e-15 57.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|15669352|ref|NP_248157.1| - 7.6e-12 45.2 0.7 1.1e-11 44.7 0.5 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily ROK PF00480.15 gi|15669352|ref|NP_248157.1| - 0.022 14.5 0.6 0.28 11.0 0.1 2.1 1 1 0 2 2 2 0 ROK family HTH_3 PF01381.17 gi|15669353|ref|NP_248158.1| - 6.8e-14 51.4 0.3 3.9e-13 49.0 0.0 2.4 3 0 0 3 3 3 1 Helix-turn-helix HTH_19 PF12844.2 gi|15669353|ref|NP_248158.1| - 5.8e-09 35.8 0.0 3.3e-08 33.4 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|15669353|ref|NP_248158.1| - 1.9e-06 27.9 0.0 4.7e-06 26.7 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15669353|ref|NP_248158.1| - 0.0021 17.6 0.2 0.0088 15.6 0.0 2.2 2 0 0 2 2 2 1 HTH domain HTH_26 PF13443.1 gi|15669353|ref|NP_248158.1| - 0.0034 17.5 0.0 0.017 15.3 0.0 2.2 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_7 PF02796.10 gi|15669353|ref|NP_248158.1| - 0.055 13.3 0.1 0.16 11.8 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase NOD PF06816.8 gi|15669353|ref|NP_248158.1| - 0.072 12.1 1.7 11 5.2 0.0 3.5 4 0 0 4 4 4 0 NOTCH protein MerR PF00376.18 gi|15669353|ref|NP_248158.1| - 0.13 11.8 0.1 0.3 10.6 0.0 1.6 1 0 0 1 1 1 0 MerR family regulatory protein Fer4 PF00037.22 gi|15669354|ref|NP_248159.1| - 3.6e-08 32.6 7.2 0.00017 21.0 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15669354|ref|NP_248159.1| - 8.4e-06 25.4 7.3 0.0024 17.6 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669354|ref|NP_248159.1| - 1e-05 25.1 11.5 0.0013 18.4 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669354|ref|NP_248159.1| - 4.6e-05 23.1 9.3 0.015 15.1 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain HTH_3 PF01381.17 gi|15669354|ref|NP_248159.1| - 0.002 17.8 0.1 0.004 16.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|15669354|ref|NP_248159.1| - 0.0022 18.0 0.3 0.0046 16.9 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Fer4_15 PF13459.1 gi|15669354|ref|NP_248159.1| - 0.0026 18.2 8.9 0.15 12.6 1.1 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|15669354|ref|NP_248159.1| - 0.012 15.9 7.0 0.42 10.9 6.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669354|ref|NP_248159.1| - 0.012 15.4 12.1 0.18 11.6 8.1 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF2250 PF10007.4 gi|15669354|ref|NP_248159.1| - 0.025 14.4 0.3 4.4 7.2 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Fer4_7 PF12838.2 gi|15669354|ref|NP_248159.1| - 0.052 13.9 11.9 0.25 11.7 8.3 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669354|ref|NP_248159.1| - 0.053 14.2 5.5 0.23 12.2 1.3 2.3 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15669354|ref|NP_248159.1| - 0.095 12.7 10.6 2.1 8.4 8.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF4422 PF14393.1 gi|15669354|ref|NP_248159.1| - 0.1 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4422) Fer4_3 PF12798.2 gi|15669354|ref|NP_248159.1| - 0.61 10.7 12.1 0.17 12.4 1.9 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|15669354|ref|NP_248159.1| - 3.1 8.2 14.7 3.7 8.0 2.2 2.6 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|15669354|ref|NP_248159.1| - 4.7 7.6 13.2 3 8.2 1.7 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15669354|ref|NP_248159.1| - 5 7.6 9.4 8.1e+02 0.5 6.5 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15669355|ref|NP_248160.1| - 4.8e-57 187.4 96.8 1.1e-08 34.3 3.1 8.3 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669355|ref|NP_248160.1| - 3e-39 133.1 66.2 1.7e-11 44.3 4.4 5.3 4 1 1 5 5 5 5 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15669355|ref|NP_248160.1| - 1.6e-37 125.7 94.9 4.1e-06 26.4 2.5 8.6 9 0 0 9 9 9 8 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15669355|ref|NP_248160.1| - 1.3e-31 108.1 70.3 3.2e-08 33.2 6.9 7.2 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669355|ref|NP_248160.1| - 1.9e-29 101.6 73.6 8.2e-08 32.4 6.6 6.7 4 3 3 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669355|ref|NP_248160.1| - 1.9e-28 98.0 72.8 2.9e-07 30.2 7.0 6.1 2 1 6 8 8 8 8 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669355|ref|NP_248160.1| - 5.4e-28 97.5 63.4 1.4e-06 28.9 6.4 7.5 5 2 3 8 8 8 8 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15669355|ref|NP_248160.1| - 8.1e-28 96.2 57.2 4.9e-08 32.8 4.6 5.3 5 0 0 5 5 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669355|ref|NP_248160.1| - 3.5e-26 89.5 82.2 0.00049 19.8 2.0 8.5 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15669355|ref|NP_248160.1| - 1.2e-17 63.9 64.3 1.5e-06 28.4 1.9 7.0 2 2 6 8 8 8 8 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15669355|ref|NP_248160.1| - 3.4e-16 58.1 84.3 0.0035 17.5 1.4 8.4 8 1 0 8 8 8 6 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15669355|ref|NP_248160.1| - 8.9e-15 54.8 59.6 0.027 14.8 1.4 8.3 8 0 0 8 8 8 7 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15669355|ref|NP_248160.1| - 1.1e-13 51.5 70.6 0.036 14.6 0.5 8.8 8 1 0 8 8 8 8 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15669355|ref|NP_248160.1| - 3.6e-06 27.1 114.9 0.026 15.0 5.7 8.7 9 0 0 9 9 8 6 4Fe-4S binding domain Fer4_11 PF13247.1 gi|15669355|ref|NP_248160.1| - 8.5e-06 25.5 46.5 0.43 10.4 4.8 6.3 2 2 4 6 6 6 4 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15669355|ref|NP_248160.1| - 9.7e-05 22.6 81.3 0.66 10.4 1.6 8.6 7 1 0 7 7 7 6 4Fe-4S single cluster domain CH PF00307.26 gi|15669355|ref|NP_248160.1| - 0.43 10.6 5.4 1.5 8.8 0.3 3.5 2 1 2 4 4 4 0 Calponin homology (CH) domain Fer4 PF00037.22 gi|15669356|ref|NP_248161.1| - 1.9e-18 65.2 15.8 6.3e-10 38.2 3.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669356|ref|NP_248161.1| - 2.4e-13 49.3 13.9 3.8e-07 29.6 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669356|ref|NP_248161.1| - 2.1e-12 47.2 7.9 2.1e-06 28.0 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15669356|ref|NP_248161.1| - 3.4e-11 42.7 5.2 2.8e-05 23.8 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669356|ref|NP_248161.1| - 1.1e-10 40.7 14.1 2e-05 24.2 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|15669356|ref|NP_248161.1| - 1.9e-10 40.8 9.7 3.8e-10 39.8 6.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669356|ref|NP_248161.1| - 2.4e-10 40.9 6.2 5.8e-05 23.7 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|15669356|ref|NP_248161.1| - 1.7e-09 37.5 5.8 2.5e-09 37.0 4.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669356|ref|NP_248161.1| - 3.7e-09 36.3 10.3 2.6e-05 23.9 1.0 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15669356|ref|NP_248161.1| - 3.9e-07 29.8 13.1 0.0026 17.9 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15669356|ref|NP_248161.1| - 1.2e-06 28.8 9.8 0.0015 18.8 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15669356|ref|NP_248161.1| - 1.9e-06 28.0 24.3 0.0054 17.1 5.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15669356|ref|NP_248161.1| - 1.1e-05 25.8 12.0 0.018 15.6 3.6 2.8 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|15669356|ref|NP_248161.1| - 3e-05 24.2 10.5 0.00035 20.8 7.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15669356|ref|NP_248161.1| - 0.00033 20.4 4.1 0.0013 18.6 2.8 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15669356|ref|NP_248161.1| - 0.039 14.3 13.1 0.36 11.2 2.7 2.6 2 1 1 3 3 3 0 4Fe-4S single cluster domain Arteri_Gl PF00951.13 gi|15669356|ref|NP_248161.1| - 0.084 12.4 0.1 0.096 12.2 0.0 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Fer4_20 PF14691.1 gi|15669356|ref|NP_248161.1| - 0.099 12.2 4.5 0.95 9.1 0.5 2.1 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MTHFR_C PF12225.3 gi|15669356|ref|NP_248161.1| - 0.12 11.8 3.0 2.6 7.6 0.2 2.2 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal zf-U11-48K PF05253.7 gi|15669356|ref|NP_248161.1| - 1.4 8.7 4.0 2 8.2 0.4 2.2 2 0 0 2 2 2 0 U11-48K-like CHHC zinc finger Fer4_19 PF06902.6 gi|15669356|ref|NP_248161.1| - 2.8 7.8 6.6 7.1 6.5 0.2 2.4 2 1 0 2 2 2 0 Divergent 4Fe-4S mono-cluster RseC_MucC PF04246.7 gi|15669356|ref|NP_248161.1| - 4.3 6.9 6.2 1.5 8.3 0.7 2.0 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC HCV_NS2 PF01538.13 gi|15669356|ref|NP_248161.1| - 5 6.5 5.8 4.2 6.7 0.1 2.0 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS2 Molydop_binding PF01568.16 gi|15669357|ref|NP_248162.1| - 2.8e-24 85.0 0.0 3.3e-24 84.7 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.13 gi|15669357|ref|NP_248162.1| - 6.5e-05 22.8 0.0 0.00013 21.8 0.0 1.4 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain UFD1 PF03152.9 gi|15669357|ref|NP_248162.1| - 0.034 13.2 0.0 0.91 8.6 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin fusion degradation protein UFD1 Rad9_Rad53_bind PF08605.5 gi|15669357|ref|NP_248162.1| - 0.065 13.0 0.1 0.14 11.9 0.1 1.5 2 0 0 2 2 2 0 Fungal Rad9-like Rad53-binding Amidohydro_3 PF07969.6 gi|15669358|ref|NP_248163.1| - 7.8e-72 242.6 0.1 9.1e-72 242.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|15669358|ref|NP_248163.1| - 7.2e-13 48.1 0.1 8.9e-12 44.6 0.0 2.6 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|15669358|ref|NP_248163.1| - 2e-06 28.0 0.0 0.0065 16.5 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|15669358|ref|NP_248163.1| - 2e-05 24.4 0.0 0.072 12.7 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family YbjQ_1 PF01906.12 gi|15669359|ref|NP_248164.1| - 1.7e-15 57.3 1.5 4.9e-09 36.5 0.1 2.1 1 1 1 2 2 2 2 Putative heavy-metal-binding SeleniumBinding PF11524.3 gi|15669359|ref|NP_248164.1| - 0.00044 20.3 1.1 0.00088 19.3 0.8 1.5 1 1 0 1 1 1 1 Selenium binding protein GXGXG PF01493.14 gi|15669360|ref|NP_248165.1| - 3.6e-49 166.5 19.6 4.6e-49 166.1 13.6 1.1 1 0 0 1 1 1 1 GXGXG motif DUF2683 PF10884.3 gi|15669361|ref|NP_248166.1| - 7.5e-38 128.3 7.6 8.4e-38 128.1 5.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) Mistic PF11458.3 gi|15669361|ref|NP_248166.1| - 0.002 18.4 0.9 0.0028 18.0 0.6 1.2 1 0 0 1 1 1 1 Membrane-integrating protein Mistic DsrC PF04358.8 gi|15669361|ref|NP_248166.1| - 0.053 13.7 0.2 0.066 13.4 0.2 1.1 1 0 0 1 1 1 0 DsrC like protein NOSIC PF08060.8 gi|15669361|ref|NP_248166.1| - 0.054 13.3 1.6 0.23 11.2 0.3 2.2 2 0 0 2 2 2 0 NOSIC (NUC001) domain DUF4433 PF14487.1 gi|15669361|ref|NP_248166.1| - 0.089 12.5 0.2 0.094 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4433) RHH_1 PF01402.16 gi|15669361|ref|NP_248166.1| - 0.11 12.4 0.3 0.23 11.3 0.1 1.7 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Wx5_PLAF3D7 PF09688.5 gi|15669361|ref|NP_248166.1| - 0.19 11.6 2.5 0.25 11.2 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) GIY-YIG PF01541.19 gi|15669361|ref|NP_248166.1| - 0.36 11.2 5.5 0.41 11.0 0.1 2.2 1 1 1 2 2 2 0 GIY-YIG catalytic domain Plasmid_stabil PF05016.9 gi|15669362|ref|NP_248167.1| - 1.2e-08 35.1 0.2 1.4e-08 35.0 0.1 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Toxin_YhaV PF11663.3 gi|15669362|ref|NP_248167.1| - 0.0044 16.7 0.5 0.006 16.3 0.3 1.2 1 0 0 1 1 1 1 Toxin with endonuclease activity YhaV TAF1D PF15333.1 gi|15669362|ref|NP_248167.1| - 0.0052 16.6 0.5 0.0064 16.2 0.4 1.1 1 0 0 1 1 1 1 TATA box-binding protein-associated factor 1D Bromodomain PF00439.20 gi|15669362|ref|NP_248167.1| - 0.0062 16.4 0.3 0.01 15.6 0.2 1.4 1 1 0 1 1 1 1 Bromodomain P4Ha_N PF08336.6 gi|15669362|ref|NP_248167.1| - 0.037 13.8 0.5 0.037 13.8 0.3 1.1 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region AAA_4 PF04326.9 gi|15669362|ref|NP_248167.1| - 0.076 13.1 1.0 0.095 12.8 0.7 1.1 1 0 0 1 1 1 0 Divergent AAA domain YcxB PF14317.1 gi|15669362|ref|NP_248167.1| - 0.083 12.1 0.0 0.19 11.0 0.0 1.6 1 1 0 1 1 1 0 YcxB-like protein FliD_N PF02465.13 gi|15669362|ref|NP_248167.1| - 0.11 12.8 0.1 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus CTP_synth_N PF06418.9 gi|15669363|ref|NP_248168.1| - 9.7e-136 451.2 0.0 1.2e-135 450.9 0.0 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|15669363|ref|NP_248168.1| - 4.2e-54 182.9 0.0 7.1e-54 182.1 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|15669363|ref|NP_248168.1| - 7.5e-07 28.8 0.0 2.1e-06 27.3 0.0 1.8 2 0 0 2 2 2 1 Peptidase C26 CbiA PF01656.18 gi|15669363|ref|NP_248168.1| - 1.5e-05 24.4 0.1 2.4e-05 23.8 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Chorismate_synt PF01264.16 gi|15669364|ref|NP_248169.1| - 3.4e-147 489.4 0.0 3.8e-147 489.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase BCIP PF13862.1 gi|15669364|ref|NP_248169.1| - 0.059 12.8 0.1 0.099 12.1 0.1 1.3 1 0 0 1 1 1 0 p21-C-terminal region-binding protein AAA PF00004.24 gi|15669365|ref|NP_248170.1| - 1.2e-44 151.6 0.2 2.6e-44 150.6 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|15669365|ref|NP_248170.1| - 1.6e-07 31.4 0.0 1.6e-07 31.4 0.0 2.3 3 0 0 3 3 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|15669365|ref|NP_248170.1| - 7.5e-07 28.4 0.0 1.7e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_5 PF07728.9 gi|15669365|ref|NP_248170.1| - 1.6e-06 27.9 0.1 1e-05 25.2 0.1 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|15669365|ref|NP_248170.1| - 1.4e-05 25.2 1.7 0.0003 20.9 0.2 2.9 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|15669365|ref|NP_248170.1| - 2.4e-05 24.4 1.5 0.00059 19.8 0.0 2.4 2 1 1 3 3 2 1 AAA ATPase domain AAA_17 PF13207.1 gi|15669365|ref|NP_248170.1| - 4.3e-05 24.3 3.2 0.0001 23.0 0.0 2.7 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.8 gi|15669365|ref|NP_248170.1| - 4.7e-05 22.4 0.0 0.00012 21.1 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF815) IstB_IS21 PF01695.12 gi|15669365|ref|NP_248170.1| - 0.00054 19.4 0.0 0.0011 18.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein RNA_helicase PF00910.17 gi|15669365|ref|NP_248170.1| - 0.00067 19.7 0.0 0.0045 17.1 0.0 2.3 2 0 0 2 2 2 1 RNA helicase AAA_14 PF13173.1 gi|15669365|ref|NP_248170.1| - 0.00085 19.2 2.1 0.0023 17.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|15669365|ref|NP_248170.1| - 0.0014 18.5 0.6 0.003 17.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|15669365|ref|NP_248170.1| - 0.0015 17.6 0.1 0.0034 16.4 0.0 1.6 2 0 0 2 2 1 1 Zeta toxin AAA_3 PF07726.6 gi|15669365|ref|NP_248170.1| - 0.0017 17.9 0.1 0.0055 16.3 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.8 gi|15669365|ref|NP_248170.1| - 0.0018 17.1 0.1 0.0018 17.1 0.0 1.9 2 0 0 2 2 2 1 TIP49 C-terminus KaiC PF06745.8 gi|15669365|ref|NP_248170.1| - 0.002 17.2 0.6 0.12 11.5 0.0 2.6 1 1 1 2 2 2 1 KaiC AAA_19 PF13245.1 gi|15669365|ref|NP_248170.1| - 0.003 17.2 0.4 0.0076 15.9 0.3 1.6 1 0 0 1 1 1 1 Part of AAA domain Mg_chelatase PF01078.16 gi|15669365|ref|NP_248170.1| - 0.005 16.0 0.1 0.013 14.6 0.0 1.6 2 0 0 2 2 1 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.1 gi|15669365|ref|NP_248170.1| - 0.0073 16.1 0.0 0.018 14.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|15669365|ref|NP_248170.1| - 0.0074 16.5 0.1 0.0074 16.5 0.0 2.7 3 0 0 3 3 2 1 AAA domain Bac_DnaA PF00308.13 gi|15669365|ref|NP_248170.1| - 0.0099 15.5 0.6 0.43 10.1 0.0 3.2 2 1 1 3 3 3 1 Bacterial dnaA protein AAA_24 PF13479.1 gi|15669365|ref|NP_248170.1| - 0.011 15.2 1.4 0.027 14.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|15669365|ref|NP_248170.1| - 0.022 14.1 1.4 0.15 11.4 0.1 2.5 1 1 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|15669365|ref|NP_248170.1| - 0.022 14.2 0.1 0.24 10.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain PhoH PF02562.11 gi|15669365|ref|NP_248170.1| - 0.027 13.6 0.5 0.098 11.8 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein Parvo_NS1 PF01057.12 gi|15669365|ref|NP_248170.1| - 0.09 11.6 0.0 0.18 10.6 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NACHT PF05729.7 gi|15669365|ref|NP_248170.1| - 0.14 11.7 0.3 0.52 9.9 0.0 2.0 2 0 0 2 2 2 0 NACHT domain HDV_ag PF01517.13 gi|15669365|ref|NP_248170.1| - 0.31 10.6 5.6 12 5.5 2.9 2.4 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen ResIII PF04851.10 gi|15669365|ref|NP_248170.1| - 0.47 10.2 0.0 0.47 10.2 0.0 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Arch_ATPase PF01637.13 gi|15669365|ref|NP_248170.1| - 0.6 9.7 8.3 0.18 11.4 0.1 3.1 2 1 0 2 2 2 0 Archaeal ATPase AAA_11 PF13086.1 gi|15669365|ref|NP_248170.1| - 3.1 7.3 6.1 0.77 9.2 0.0 2.4 2 1 0 2 2 2 0 AAA domain V_ATPase_I PF01496.14 gi|15669365|ref|NP_248170.1| - 7 4.3 9.6 8.3 4.1 4.7 1.9 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Glycos_transf_1 PF00534.15 gi|15669366|ref|NP_248171.1| - 3.5e-40 137.2 2.0 7.5e-40 136.1 0.2 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|15669366|ref|NP_248171.1| - 1.6e-18 67.1 0.0 1.3e-17 64.1 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|15669366|ref|NP_248171.1| - 8.6e-17 61.2 2.4 1.7e-16 60.3 1.6 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|15669366|ref|NP_248171.1| - 4.4e-14 52.5 0.0 6.2e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|15669366|ref|NP_248171.1| - 1.1e-13 51.2 0.0 2.7e-13 49.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|15669366|ref|NP_248171.1| - 6.1e-09 36.2 0.0 9.2e-09 35.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain DUF3492 PF11997.3 gi|15669366|ref|NP_248171.1| - 0.00056 19.5 2.5 0.011 15.2 0.1 2.9 2 1 1 3 3 3 1 Domain of unknown function (DUF3492) UPF0118 PF01594.11 gi|15669367|ref|NP_248172.1| - 1.1e-71 241.4 39.0 1.4e-71 241.1 27.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 CTP_transf_2 PF01467.21 gi|15669368|ref|NP_248173.1| - 3.1e-20 72.8 0.0 6.8e-20 71.6 0.0 1.5 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|15669368|ref|NP_248173.1| - 0.0022 17.6 0.0 0.0035 16.9 0.0 1.6 1 1 0 1 1 1 1 FAD synthetase NMT1_2 PF13379.1 gi|15669369|ref|NP_248174.1| - 1.2e-13 51.0 0.0 1.4e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 NMT1-like family SBP_bac_1 PF01547.20 gi|15669369|ref|NP_248174.1| - 0.058 13.1 0.2 0.14 11.8 0.2 1.6 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.15 gi|15669369|ref|NP_248174.1| - 0.091 11.9 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.1 gi|15669370|ref|NP_248175.1| - 2e-24 86.3 0.4 2.4e-24 86.0 0.3 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|15669370|ref|NP_248175.1| - 0.0068 16.0 0.0 0.0093 15.5 0.0 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Swi5 PF07061.6 gi|15669370|ref|NP_248175.1| - 0.017 14.9 0.5 0.046 13.4 0.0 1.9 2 0 0 2 2 2 0 Swi5 NAD_binding_8 PF13450.1 gi|15669371|ref|NP_248176.1| - 0.0042 17.0 0.1 0.0098 15.9 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.14 gi|15669371|ref|NP_248176.1| - 0.077 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain DUF2124 PF09897.4 gi|15669372|ref|NP_248177.1| - 7.1e-57 191.2 0.5 8.2e-57 191.0 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) TIP49 PF06068.8 gi|15669372|ref|NP_248177.1| - 0.01 14.6 0.0 0.013 14.2 0.0 1.1 1 0 0 1 1 1 0 TIP49 C-terminus Flavodoxin_5 PF12724.2 gi|15669372|ref|NP_248177.1| - 0.038 13.9 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain GATase PF00117.23 gi|15669372|ref|NP_248177.1| - 0.095 12.1 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I DMRL_synthase PF00885.14 gi|15669373|ref|NP_248178.1| - 6.9e-19 67.9 0.0 7.8e-19 67.7 0.0 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase EH_Signature PF15611.1 gi|15669373|ref|NP_248178.1| - 0.053 12.5 0.0 0.057 12.4 0.0 1.0 1 0 0 1 1 1 0 EH_Signature domain AFOR_N PF02730.10 gi|15669374|ref|NP_248179.1| - 5.7e-21 74.7 0.0 1.1e-20 73.9 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain AFOR_C PF01314.13 gi|15669374|ref|NP_248179.1| - 2.2e-18 66.0 0.0 8.9e-18 64.1 0.0 1.9 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SBP_bac_11 PF13531.1 gi|15669375|ref|NP_248180.1| - 9.9e-36 123.5 0.0 1.8e-35 122.6 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|15669375|ref|NP_248180.1| - 3.5e-18 66.3 0.7 4.6e-18 66.0 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.1 gi|15669375|ref|NP_248180.1| - 0.046 13.0 1.9 0.28 10.4 0.0 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein AP_endonuc_2 PF01261.19 gi|15669376|ref|NP_248181.1| - 1.8e-28 99.3 0.0 3.3e-28 98.4 0.0 1.4 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel SAM_2 PF07647.12 gi|15669376|ref|NP_248181.1| - 0.077 12.8 0.1 0.26 11.1 0.0 2.0 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) ADP_ribosyl_GH PF03747.9 gi|15669377|ref|NP_248182.1| - 5.1e-66 223.3 0.0 5.8e-66 223.2 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Rick_17kDa_Anti PF05433.10 gi|15669377|ref|NP_248182.1| - 1.1 9.0 3.5 9.4 5.9 0.0 2.9 3 0 0 3 3 3 0 Glycine zipper 2TM domain DUF4013 PF13197.1 gi|15669378|ref|NP_248183.1| - 1.4e-28 99.3 36.3 1.4e-28 99.3 25.2 2.8 2 1 1 3 3 3 1 Protein of unknown function (DUF4013) FlpD PF02662.11 gi|15669893|ref|NP_248185.1| - 2.4e-46 156.4 0.2 2.7e-46 156.2 0.1 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit DFP PF04127.10 gi|15669893|ref|NP_248185.1| - 0.0019 17.8 0.0 0.0023 17.6 0.0 1.1 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Oxidored_q6 PF01058.17 gi|15669379|ref|NP_248186.1| - 4.9e-34 116.7 0.0 7.5e-34 116.1 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1643 PF07799.7 gi|15669379|ref|NP_248186.1| - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1643) NiFeSe_Hases PF00374.14 gi|298575368|ref|NP_248187.2| - 1.9e-35 122.6 1.2 1.4e-24 86.8 0.0 3.0 1 1 1 3 3 3 3 Nickel-dependent hydrogenase RRF PF01765.14 gi|298575368|ref|NP_248187.2| - 0.0085 15.5 0.2 0.022 14.2 0.1 1.7 1 0 0 1 1 1 1 Ribosome recycling factor Fer4 PF00037.22 gi|15669380|ref|NP_248188.1| - 1.4e-54 179.6 122.4 2.1e-07 30.2 1.9 12.2 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669380|ref|NP_248188.1| - 3.4e-46 155.4 93.7 2.6e-12 46.8 5.2 8.5 4 1 6 10 10 10 9 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15669380|ref|NP_248188.1| - 1.6e-35 119.4 120.4 2.6e-05 23.9 1.0 11.9 12 0 0 12 12 12 11 4Fe-4S binding domain Fer4_16 PF13484.1 gi|15669380|ref|NP_248188.1| - 2.5e-35 121.0 93.5 1.3e-06 28.9 6.3 11.1 5 4 6 11 11 11 11 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|15669380|ref|NP_248188.1| - 5.1e-35 119.0 100.4 5.1e-08 32.5 6.8 8.5 3 2 6 10 10 10 9 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669380|ref|NP_248188.1| - 4.1e-34 116.6 105.4 1.7e-08 34.5 9.4 8.6 4 2 7 11 11 11 11 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15669380|ref|NP_248188.1| - 1.8e-28 98.3 86.8 5.1e-08 32.8 5.6 8.6 7 2 3 10 10 10 8 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|15669380|ref|NP_248188.1| - 1e-27 95.7 102.2 1.1e-07 31.5 9.2 9.1 5 2 3 9 9 9 7 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669380|ref|NP_248188.1| - 1.1e-25 87.9 114.8 0.00033 20.3 2.5 12.2 12 0 0 12 12 12 10 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15669380|ref|NP_248188.1| - 1.3e-16 59.4 112.9 0.023 15.0 2.5 12.0 12 0 0 12 12 12 9 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15669380|ref|NP_248188.1| - 1.1e-15 57.7 96.7 0.0016 18.7 0.4 10.7 5 3 4 9 9 9 7 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15669380|ref|NP_248188.1| - 1e-13 50.7 145.5 0.0049 17.3 3.9 12.4 12 0 0 12 12 12 9 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15669380|ref|NP_248188.1| - 1.6e-12 47.6 111.1 0.005 17.2 1.7 11.8 7 3 5 12 12 12 8 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|15669380|ref|NP_248188.1| - 1.4e-08 34.5 71.8 0.00084 19.1 6.5 6.7 2 2 4 6 6 6 4 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15669380|ref|NP_248188.1| - 1.8e-06 28.4 98.2 0.012 16.1 2.8 11.1 7 4 4 11 11 11 6 4Fe-4S single cluster domain HMGL-like PF00682.14 gi|15669381|ref|NP_248190.1| - 3.6e-85 285.3 0.4 9.7e-85 283.9 0.3 1.7 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|15669381|ref|NP_248190.1| - 3.7e-37 127.0 6.1 7.9e-37 126.0 4.2 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain AP_endonuc_2 PF01261.19 gi|15669381|ref|NP_248190.1| - 0.019 14.2 0.2 0.13 11.5 0.0 2.4 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel Imm45 PF15603.1 gi|15669381|ref|NP_248190.1| - 1.8 8.7 5.7 0.98 9.6 0.2 3.2 2 1 1 3 3 3 0 Immunity protein 45 AA_permease_2 PF13520.1 gi|15669382|ref|NP_248191.1| - 3.4e-23 81.8 59.6 5.7e-23 81.1 41.3 1.4 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|15669382|ref|NP_248191.1| - 2.3e-08 32.8 54.7 9.9e-08 30.7 37.9 1.9 1 1 0 1 1 1 1 Amino acid permease tRNA-Thr_ED PF08915.6 gi|15669383|ref|NP_248192.1| - 7e-57 191.2 0.1 1.4e-56 190.2 0.1 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|15669383|ref|NP_248192.1| - 2.8e-25 88.8 2.0 9.2e-25 87.1 0.6 2.1 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|15669383|ref|NP_248192.1| - 1.5e-24 85.7 3.4 2.4e-24 85.0 1.6 2.0 2 0 0 2 2 2 1 Anticodon binding domain DUF1122 PF06557.6 gi|15669383|ref|NP_248192.1| - 0.012 14.8 0.0 0.035 13.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1122) Glycoamylase PF10091.4 gi|15669383|ref|NP_248192.1| - 0.043 12.8 0.0 0.073 12.1 0.0 1.3 1 0 0 1 1 1 0 Putative glucoamylase DHH PF01368.15 gi|15669384|ref|NP_248193.1| - 6.5e-14 51.7 0.2 1.2e-13 50.9 0.1 1.4 1 0 0 1 1 1 1 DHH family S1 PF00575.18 gi|15669384|ref|NP_248193.1| - 2.5e-10 40.2 0.2 2.5e-10 40.2 0.2 3.5 5 0 0 5 5 5 1 S1 RNA binding domain DnaJ_CXXCXGXG PF00684.14 gi|15669384|ref|NP_248193.1| - 1.9e-07 31.0 8.3 1.9e-07 31.0 5.8 2.9 1 1 1 2 2 2 2 DnaJ central domain tRNA_anti-codon PF01336.20 gi|15669384|ref|NP_248193.1| - 2.8e-06 27.0 0.5 1.2e-05 25.0 0.3 2.1 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain DUF1356 PF07092.7 gi|15669384|ref|NP_248193.1| - 0.89 8.7 4.6 6.6 5.8 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1356) Stc1 PF12898.2 gi|15669384|ref|NP_248193.1| - 1.6 8.8 8.5 0.27 11.3 0.1 2.7 1 1 1 2 2 2 0 Stc1 domain zf-RING_3 PF14369.1 gi|15669384|ref|NP_248193.1| - 2.2 8.3 5.4 13 5.8 0.1 3.6 3 0 0 3 3 3 0 zinc-finger DUF2122 PF09895.4 gi|15669385|ref|NP_248194.1| - 9e-34 115.8 0.0 1.3e-33 115.3 0.0 1.2 1 0 0 1 1 1 1 RecB-family nuclease (DUF2122) DNA_methylase PF00145.12 gi|15669386|ref|NP_248195.1| - 3.5e-48 164.4 0.3 2.3e-33 115.7 0.0 3.1 2 1 0 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_26 PF13659.1 gi|15669386|ref|NP_248195.1| - 3.5e-05 23.8 0.0 8.2e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|15669386|ref|NP_248195.1| - 0.0013 18.3 0.0 0.0025 17.3 0.0 1.5 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Ribosomal_L24e PF01246.15 gi|15669387|ref|NP_248196.1| - 2.2e-34 117.1 1.4 2.4e-34 117.0 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.9 gi|15669387|ref|NP_248196.1| - 4.1e-06 26.3 2.6 6.3e-06 25.7 1.8 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif YHS PF04945.8 gi|15669387|ref|NP_248196.1| - 0.0088 15.8 1.6 0.013 15.2 1.1 1.3 1 0 0 1 1 1 1 YHS domain DUF2116 PF09889.4 gi|15669387|ref|NP_248196.1| - 0.041 13.6 3.0 0.45 10.3 0.8 2.2 2 1 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) PRESAN PF09687.5 gi|15669387|ref|NP_248196.1| - 0.049 13.6 0.4 0.052 13.6 0.3 1.1 1 0 0 1 1 1 0 Plasmodium RESA N-terminal ICAM_N PF03921.9 gi|15669387|ref|NP_248196.1| - 0.064 12.7 0.0 0.072 12.5 0.0 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain NosL PF05573.7 gi|15669387|ref|NP_248196.1| - 0.12 12.0 0.2 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 NosL ATPase-cat_bd PF12156.3 gi|15669387|ref|NP_248196.1| - 0.18 12.3 1.0 0.22 12.0 0.7 1.3 1 1 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase zf-ribbon_3 PF13248.1 gi|15669387|ref|NP_248196.1| - 0.36 10.0 2.3 1 8.6 1.6 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-C4_ClpX PF06689.8 gi|15669387|ref|NP_248196.1| - 0.37 10.3 3.0 0.71 9.4 2.0 1.6 1 1 0 1 1 1 0 ClpX C4-type zinc finger zinc_ribbon_2 PF13240.1 gi|15669387|ref|NP_248196.1| - 0.46 10.0 0.2 0.46 10.0 0.1 2.1 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_S28e PF01200.13 gi|15669388|ref|NP_248197.1| - 1e-31 108.4 2.2 1.2e-31 108.2 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.21 gi|15669389|ref|NP_248198.1| - 5.4e-31 105.9 2.2 6.7e-31 105.6 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.1 gi|15669389|ref|NP_248198.1| - 0.0004 20.1 0.0 0.00064 19.4 0.0 1.4 1 0 0 1 1 1 1 PELOTA RNA binding domain MazG-like PF12643.2 gi|15669389|ref|NP_248198.1| - 0.094 12.6 0.3 0.16 11.8 0.2 1.4 1 0 0 1 1 1 0 MazG-like family HisG PF01634.13 gi|15669390|ref|NP_248199.1| - 6.6e-58 194.8 0.4 9.3e-58 194.4 0.3 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|15669390|ref|NP_248199.1| - 2.3e-28 97.9 0.2 4.7e-28 96.9 0.1 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain Cas_DxTHG PF09455.5 gi|15669390|ref|NP_248199.1| - 0.044 12.9 1.1 0.06 12.4 0.7 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family DUF1788 PF08747.6 gi|15669390|ref|NP_248199.1| - 0.085 12.7 0.1 0.23 11.3 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1788) UPF0058 PF01893.11 gi|15669391|ref|NP_248200.1| - 7.3e-32 109.2 2.8 8.9e-32 109.0 1.9 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 DUF4181 PF13789.1 gi|15669391|ref|NP_248200.1| - 0.057 13.3 0.3 0.082 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) Toprim_4 PF13662.1 gi|15669392|ref|NP_248201.1| - 7.1e-11 41.9 0.5 2.1e-10 40.4 0.1 2.1 2 0 0 2 2 2 1 Toprim domain Toprim PF01751.17 gi|15669392|ref|NP_248201.1| - 5e-06 26.4 3.1 1.6e-05 24.8 0.1 3.0 3 0 0 3 3 3 1 Toprim domain Toprim_2 PF13155.1 gi|15669392|ref|NP_248201.1| - 0.0069 16.6 0.0 0.079 13.2 0.0 2.4 2 0 0 2 2 2 1 Toprim-like DRTGG PF07085.7 gi|15669392|ref|NP_248201.1| - 0.03 13.9 0.6 1.4 8.5 0.1 2.6 2 0 0 2 2 2 0 DRTGG domain Acetyltransf_1 PF00583.19 gi|15669393|ref|NP_248202.1| - 9.3e-24 83.2 0.1 1.5e-23 82.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|15669393|ref|NP_248202.1| - 8.5e-16 58.1 0.0 1.1e-15 57.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|15669393|ref|NP_248202.1| - 1.3e-15 57.2 0.1 2.4e-15 56.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|15669393|ref|NP_248202.1| - 3.1e-13 49.6 0.0 4.1e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|15669393|ref|NP_248202.1| - 4.2e-13 49.5 0.1 5.9e-13 49.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|15669393|ref|NP_248202.1| - 3.8e-12 46.3 0.1 5.5e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|15669393|ref|NP_248202.1| - 7.8e-12 45.5 0.2 1.1e-11 45.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|15669393|ref|NP_248202.1| - 3.2e-11 42.8 0.0 5.1e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|15669393|ref|NP_248202.1| - 8.8e-09 35.1 0.0 1.7e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.1 gi|15669393|ref|NP_248202.1| - 8.2e-08 32.3 0.0 1.3e-07 31.6 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain AdoMet_Synthase PF01941.14 gi|15669394|ref|NP_248203.1| - 1e-185 616.9 8.5 1.2e-185 616.7 5.9 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) TBCA PF02970.11 gi|15669394|ref|NP_248203.1| - 0.019 15.0 2.9 0.047 13.7 2.0 1.7 1 0 0 1 1 1 0 Tubulin binding cofactor A IFT20 PF14931.1 gi|15669394|ref|NP_248203.1| - 0.047 13.5 0.2 0.56 10.1 0.1 2.5 2 1 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 S-AdoMet_synt_N PF00438.15 gi|15669394|ref|NP_248203.1| - 0.077 13.2 3.1 0.18 12.0 0.2 2.9 2 1 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain Syntaxin PF00804.20 gi|15669394|ref|NP_248203.1| - 0.76 9.9 2.6 4.9 7.3 0.1 2.5 3 0 0 3 3 3 0 Syntaxin DUF2031 PF09592.5 gi|15669394|ref|NP_248203.1| - 4 6.5 7.9 4.6 6.3 0.8 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2031) F-actin_cap_A PF01267.12 gi|298575367|ref|NP_248204.2| - 0.026 13.5 0.5 0.057 12.4 0.3 1.6 1 1 0 1 1 1 0 F-actin capping protein alpha subunit N6_N4_Mtase PF01555.13 gi|298575372|ref|YP_003727984.1| - 5.2e-18 65.3 1.0 5.2e-18 65.3 0.7 1.5 2 0 0 2 2 2 1 DNA methylase Methyltransf_26 PF13659.1 gi|298575372|ref|YP_003727984.1| - 4.1e-06 26.8 0.0 6.8e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|298575372|ref|YP_003727984.1| - 0.0043 16.6 0.0 0.0057 16.2 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_Mtase PF02384.11 gi|298575372|ref|YP_003727984.1| - 0.057 12.4 0.0 0.072 12.1 0.0 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase Methyltransf_31 PF13847.1 gi|298575372|ref|YP_003727984.1| - 0.1 12.1 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PAC2 PF09754.4 gi|15669395|ref|NP_248205.1| - 9.7e-52 175.9 0.0 1.1e-51 175.7 0.0 1.0 1 0 0 1 1 1 1 PAC2 family HHH_2 PF12826.2 gi|15669395|ref|NP_248205.1| - 0.0056 16.5 1.4 2.8 7.9 0.1 3.7 3 1 0 3 3 3 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.15 gi|15669395|ref|NP_248205.1| - 0.009 16.2 0.2 5.4 7.3 0.0 2.8 2 0 0 2 2 2 2 5'-3' exonuclease, C-terminal SAM fold CDP-OH_P_transf PF01066.16 gi|15669397|ref|NP_248207.1| - 8.5e-12 45.2 4.4 8.5e-12 45.2 3.0 3.2 2 1 1 3 3 3 1 CDP-alcohol phosphatidyltransferase Pigment_DH PF06324.6 gi|15669397|ref|NP_248207.1| - 0.19 11.0 3.8 0.61 9.4 2.6 2.0 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) Peptidase_A24 PF01478.13 gi|15669397|ref|NP_248207.1| - 5.6 7.1 16.7 0.096 12.8 2.0 3.1 1 1 1 2 2 2 0 Type IV leader peptidase family Peptidase_M56 PF05569.6 gi|15669398|ref|NP_248208.1| - 5.2e-08 32.2 1.4 5.7e-08 32.0 0.9 1.0 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF45 PF01863.12 gi|15669398|ref|NP_248208.1| - 3e-05 23.9 0.1 3.5e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 Peptidase_M48 PF01435.13 gi|15669398|ref|NP_248208.1| - 9.1e-05 22.1 0.0 9.8e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 DUF955 PF06114.8 gi|15669398|ref|NP_248208.1| - 0.0001 22.0 0.2 0.00014 21.5 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF955) SprT-like PF10263.4 gi|15669398|ref|NP_248208.1| - 0.00019 21.1 0.1 0.00023 20.8 0.1 1.1 1 0 0 1 1 1 1 SprT-like family DUF2201_N PF13203.1 gi|15669398|ref|NP_248208.1| - 0.0053 15.9 0.0 0.0057 15.8 0.0 1.1 1 0 0 1 1 1 1 Putative metallopeptidase domain Phage_int_SAM_3 PF14659.1 gi|15669398|ref|NP_248208.1| - 0.39 11.0 4.3 0.48 10.7 0.9 2.5 1 1 1 2 2 2 0 Phage integrase, N-terminal SAM-like domain HSDR_N PF04313.9 gi|15669399|ref|NP_248209.1| - 2.5e-37 128.4 7.5 2.5e-37 128.4 5.2 4.9 6 2 0 6 6 6 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|15669399|ref|NP_248209.1| - 4.5e-17 62.4 0.4 4.5e-17 62.4 0.3 3.6 3 2 1 4 4 4 1 Type III restriction enzyme, res subunit Glyco_hydro_108 PF05838.7 gi|15669399|ref|NP_248209.1| - 0.044 13.9 0.0 0.16 12.0 0.0 2.0 1 0 0 1 1 1 0 Glycosyl hydrolase 108 NTP_transf_2 PF01909.18 gi|15669400|ref|NP_248210.1| - 5.7e-18 65.0 0.6 7.3e-18 64.6 0.4 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15669400|ref|NP_248210.1| - 0.0001 22.2 0.0 0.00011 22.1 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm Nuc-transf PF10127.4 gi|15669400|ref|NP_248210.1| - 0.069 12.4 0.0 0.079 12.2 0.0 1.1 1 0 0 1 1 1 0 Predicted nucleotidyltransferase Adenyl_cycl_N PF12633.2 gi|15669400|ref|NP_248210.1| - 0.081 12.4 0.0 0.083 12.4 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain RBD-FIP PF09457.5 gi|15669400|ref|NP_248210.1| - 0.39 10.5 6.1 1.9 8.3 0.4 2.2 2 0 0 2 2 2 0 FIP domain DUF86 PF01934.12 gi|15669401|ref|NP_248211.1| - 1.2e-25 89.4 0.9 1.5e-25 89.1 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Peptidase_C5 PF00770.13 gi|15669401|ref|NP_248211.1| - 0.11 12.0 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Adenovirus endoprotease NTP_transf_2 PF01909.18 gi|15669402|ref|NP_248212.1| - 5.4e-20 71.5 3.7 6.4e-20 71.2 2.6 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15669402|ref|NP_248212.1| - 0.00055 19.9 0.0 0.0006 19.8 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm Adenyl_cycl_N PF12633.2 gi|15669402|ref|NP_248212.1| - 0.038 13.5 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain MdcG PF10620.4 gi|15669402|ref|NP_248212.1| - 0.17 11.4 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG Methylase_S PF01420.14 gi|15669403|ref|NP_248213.1| - 4.8e-73 244.6 20.7 1.6e-42 145.3 3.6 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain TatD_DNase PF01026.16 gi|15669403|ref|NP_248213.1| - 0.11 11.6 0.1 0.2 10.8 0.1 1.3 1 0 0 1 1 1 0 TatD related DNase DUF3040 PF11239.3 gi|15669404|ref|NP_248214.1| - 3.9 7.5 5.8 3.3 7.8 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) N6_Mtase PF02384.11 gi|15669405|ref|NP_248215.1| - 4.6e-110 367.5 0.3 7.2e-110 366.9 0.2 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_26 PF13659.1 gi|15669405|ref|NP_248215.1| - 3.1e-06 27.1 0.0 6.5e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|15669405|ref|NP_248215.1| - 4.2e-06 26.4 0.0 1.2e-05 24.9 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 HsdM_N PF12161.3 gi|15669405|ref|NP_248215.1| - 0.0003 21.2 4.4 0.0003 21.2 3.0 3.1 3 1 1 4 4 4 1 HsdM N-terminal domain HTH_27 PF13463.1 gi|15669405|ref|NP_248215.1| - 0.0019 18.5 0.1 0.0063 16.8 0.1 1.9 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|15669405|ref|NP_248215.1| - 0.0031 17.1 0.4 0.021 14.4 0.1 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|15669405|ref|NP_248215.1| - 0.0067 16.1 0.1 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 MarR family Gelsolin PF00626.17 gi|15669405|ref|NP_248215.1| - 0.019 14.6 0.0 0.044 13.4 0.0 1.5 1 0 0 1 1 1 0 Gelsolin repeat PadR PF03551.9 gi|15669405|ref|NP_248215.1| - 0.043 13.5 1.0 0.43 10.3 0.2 2.5 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family CorA PF01544.13 gi|15669405|ref|NP_248215.1| - 0.047 12.7 4.4 0.049 12.6 1.5 2.0 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF2513 PF10711.4 gi|15669405|ref|NP_248215.1| - 0.073 13.1 1.3 0.16 12.1 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) Cep57_CLD_2 PF14197.1 gi|15669405|ref|NP_248215.1| - 1.7 8.6 7.9 45 4.0 0.2 3.9 4 0 0 4 4 4 0 Centrosome localisation domain of PPC89 DUF389 PF04087.9 gi|15669406|ref|NP_248216.1| - 6.4e-25 87.7 13.4 6.4e-25 87.7 9.3 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF389) Glycos_transf_2 PF00535.21 gi|15669407|ref|NP_248217.1| - 3.3e-27 95.2 0.0 4.2e-27 94.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|15669407|ref|NP_248217.1| - 3.6e-06 26.9 0.0 4.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|15669407|ref|NP_248217.1| - 9.8e-05 22.5 0.0 0.00016 21.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Toprim_4 PF13662.1 gi|15669407|ref|NP_248217.1| - 0.056 13.4 0.0 0.28 11.1 0.0 2.0 1 1 0 1 1 1 0 Toprim domain Borrelia_lipo_2 PF06238.6 gi|15669407|ref|NP_248217.1| - 0.099 12.7 1.0 0.3 11.1 0.0 2.2 2 0 0 2 2 2 0 Borrelia burgdorferi BBR25 lipoprotein MrpF_PhaF PF04066.8 gi|15669408|ref|NP_248218.1| - 0.031 14.5 4.4 0.031 14.5 3.1 1.6 2 0 0 2 2 2 0 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABC2_membrane_5 PF13346.1 gi|15669408|ref|NP_248218.1| - 0.069 12.4 4.9 0.074 12.3 3.4 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2270 PF10028.4 gi|15669408|ref|NP_248218.1| - 0.1 12.0 1.6 0.11 11.9 1.0 1.2 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2270) DUF2157 PF09925.4 gi|15669408|ref|NP_248218.1| - 0.19 11.3 5.3 0.24 10.9 3.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) ATP-synt_A PF00119.15 gi|15669408|ref|NP_248218.1| - 0.66 9.4 5.0 0.8 9.1 3.5 1.3 1 1 0 1 1 1 0 ATP synthase A chain 5TM-5TMR_LYT PF07694.7 gi|15669408|ref|NP_248218.1| - 0.73 9.1 7.4 0.94 8.7 5.1 1.0 1 0 0 1 1 1 0 5TMR of 5TMR-LYT DUF61 PF01886.11 gi|15669409|ref|NP_248219.1| - 8.5e-44 148.5 7.7 9.7e-44 148.4 5.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 Tn916-Xis PF09035.5 gi|15669409|ref|NP_248219.1| - 0.0018 18.2 0.2 0.0043 17.1 0.1 1.7 1 1 0 1 1 1 1 Excisionase from transposon Tn916 DUF3944 PF13099.1 gi|15669409|ref|NP_248219.1| - 0.047 13.1 0.1 0.088 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) Desmo_N PF06771.6 gi|15669409|ref|NP_248219.1| - 0.081 12.8 0.9 12 5.9 0.1 2.4 2 1 0 2 2 2 0 Viral Desmoplakin N-terminus NdhN PF11909.3 gi|15669409|ref|NP_248219.1| - 0.1 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 NADH-quinone oxidoreductase cyanobacterial subunit N CBS PF00571.23 gi|15669410|ref|NP_248220.1| - 6.3e-63 208.3 11.7 1.6e-15 56.5 0.1 4.1 4 0 0 4 4 4 4 CBS domain Peptidase_S51 PF03575.12 gi|15669410|ref|NP_248220.1| - 0.018 14.8 0.1 0.059 13.1 0.0 1.9 2 0 0 2 2 2 0 Peptidase family S51 DUF2758 PF10957.3 gi|15669410|ref|NP_248220.1| - 0.042 13.6 1.1 2.8 7.8 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2758) E1-E2_ATPase PF00122.15 gi|15669411|ref|NP_248221.1| - 9.9e-66 221.0 8.3 9.9e-66 221.0 5.7 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|15669411|ref|NP_248221.1| - 5.5e-28 98.8 0.6 1e-27 97.9 0.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|15669411|ref|NP_248221.1| - 5e-18 64.3 0.0 1.6e-17 62.6 0.0 2.0 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|15669411|ref|NP_248221.1| - 6.5e-13 49.2 0.0 1.6e-12 48.0 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|15669411|ref|NP_248221.1| - 6.4e-06 25.9 5.9 2.9e-05 23.7 0.3 3.2 2 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|15669411|ref|NP_248221.1| - 5.2e-05 23.1 0.1 0.00013 21.8 0.1 1.6 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Radical_SAM PF04055.16 gi|15669412|ref|NP_248222.1| - 6e-23 81.8 5.1 6.7e-23 81.6 2.5 1.7 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|15669412|ref|NP_248222.1| - 4e-15 56.1 0.8 7e-15 55.3 0.1 1.7 1 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|15669412|ref|NP_248222.1| - 7.5e-13 48.5 0.4 2.7e-12 46.7 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain Glutaredoxin PF00462.19 gi|15669412|ref|NP_248222.1| - 0.0084 16.0 0.4 0.067 13.1 0.0 2.4 2 0 0 2 2 2 1 Glutaredoxin DJ-1_PfpI PF01965.19 gi|15669412|ref|NP_248222.1| - 0.019 14.4 0.0 0.046 13.1 0.0 1.6 1 0 0 1 1 1 0 DJ-1/PfpI family DUF4062 PF13271.1 gi|15669412|ref|NP_248222.1| - 0.08 12.9 0.3 0.17 11.9 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) PADR1 PF08063.7 gi|15669412|ref|NP_248222.1| - 0.56 9.6 3.2 0.44 9.9 0.3 2.0 2 0 0 2 2 2 0 PADR1 (NUC008) domain eIF-5a PF01287.15 gi|15669413|ref|NP_248223.1| - 1.1e-13 50.9 0.2 1.7e-13 50.2 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|15669413|ref|NP_248223.1| - 1.5e-07 31.1 0.2 1.1e-05 25.2 0.0 2.2 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain KOW PF00467.24 gi|15669413|ref|NP_248223.1| - 0.00035 20.1 3.6 0.00078 19.0 0.6 2.9 3 1 0 3 3 3 1 KOW motif EFP PF01132.15 gi|15669413|ref|NP_248223.1| - 0.09 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain CPSase_L_D2 PF02786.12 gi|15669414|ref|NP_248224.1| - 5e-83 277.5 0.7 8.9e-83 276.7 0.5 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|15669414|ref|NP_248224.1| - 7.7e-46 154.7 0.1 2e-45 153.4 0.1 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 gi|15669414|ref|NP_248224.1| - 8.6e-43 144.6 0.0 1.7e-42 143.7 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATPgrasp_Ter PF15632.1 gi|15669414|ref|NP_248224.1| - 9.9e-20 70.5 0.1 1.5e-19 69.9 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_4 PF13535.1 gi|15669414|ref|NP_248224.1| - 5.9e-16 58.7 0.0 1.3e-15 57.5 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|15669414|ref|NP_248224.1| - 6.4e-14 51.8 0.0 2.1e-13 50.1 0.0 1.9 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|15669414|ref|NP_248224.1| - 4.1e-11 42.7 0.2 4.1e-10 39.4 0.2 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.14 gi|15669414|ref|NP_248224.1| - 1.7e-06 27.7 0.1 3.9e-06 26.5 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.9 gi|15669414|ref|NP_248224.1| - 3.8e-06 26.8 0.1 7.2e-06 25.9 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|15669414|ref|NP_248224.1| - 2.4e-05 23.7 0.3 6e-05 22.4 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain AP_endonuc_2 PF01261.19 gi|15669414|ref|NP_248224.1| - 9.9e-05 21.7 0.2 0.004 16.4 0.0 3.3 2 1 1 3 3 3 1 Xylose isomerase-like TIM barrel UPF0150 PF03681.10 gi|15669414|ref|NP_248224.1| - 0.0011 18.5 2.3 0.059 12.9 0.0 3.2 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0150) ATP-grasp_5 PF13549.1 gi|15669414|ref|NP_248224.1| - 0.0038 16.4 0.0 0.0093 15.1 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain DUF504 PF04457.7 gi|15669414|ref|NP_248224.1| - 0.037 14.1 0.0 0.11 12.6 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF504) DUF2082 PF09855.4 gi|15669415|ref|NP_248225.1| - 1.9e-31 107.6 2.5 2.2e-31 107.5 1.7 1.0 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TF_Zn_Ribbon PF08271.7 gi|15669415|ref|NP_248225.1| - 0.00029 20.0 2.2 0.00075 18.7 1.5 1.8 1 1 0 1 1 1 1 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|15669415|ref|NP_248225.1| - 0.00055 20.1 0.2 0.00077 19.7 0.1 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-ISL3 PF14690.1 gi|15669415|ref|NP_248225.1| - 0.0017 18.3 2.3 0.47 10.5 0.1 2.2 1 1 1 2 2 2 2 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|15669415|ref|NP_248225.1| - 0.0018 18.0 0.4 0.64 9.8 0.1 2.2 2 0 0 2 2 2 1 Transposase zinc-ribbon domain DUF3797 PF12677.2 gi|15669415|ref|NP_248225.1| - 0.0018 17.8 0.3 0.088 12.4 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF3797) zf-ribbon_3 PF13248.1 gi|15669415|ref|NP_248225.1| - 0.0035 16.5 1.9 0.66 9.2 0.3 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DUF2225 PF09986.4 gi|15669415|ref|NP_248225.1| - 0.0058 16.1 3.4 0.021 14.2 2.3 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) A2L_zn_ribbon PF08792.5 gi|15669415|ref|NP_248225.1| - 0.0068 15.8 3.6 0.71 9.4 0.3 2.4 2 0 0 2 2 2 2 A2L zinc ribbon domain TFIIS_C PF01096.13 gi|15669415|ref|NP_248225.1| - 0.0089 15.6 3.3 0.7 9.5 0.2 2.3 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) zf-H2C2_2 PF13465.1 gi|15669415|ref|NP_248225.1| - 0.011 15.9 3.0 1.4 9.3 0.4 2.2 2 0 0 2 2 2 0 Zinc-finger double domain Rubredoxin PF00301.15 gi|15669415|ref|NP_248225.1| - 0.012 15.4 1.6 0.26 11.1 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin zf-Sec23_Sec24 PF04810.10 gi|15669415|ref|NP_248225.1| - 0.023 14.2 1.9 0.15 11.6 0.1 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger CpXC PF14353.1 gi|15669415|ref|NP_248225.1| - 0.025 14.5 1.6 0.086 12.8 1.1 1.8 1 1 0 1 1 1 0 CpXC protein zf-DNA_Pol PF08996.5 gi|15669415|ref|NP_248225.1| - 0.033 13.5 0.8 0.077 12.3 0.6 1.4 1 1 0 1 1 1 0 DNA Polymerase alpha zinc finger zinc_ribbon_4 PF13717.1 gi|15669415|ref|NP_248225.1| - 0.033 13.8 2.2 3.2 7.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.13 gi|15669415|ref|NP_248225.1| - 0.039 13.0 1.2 0.039 13.0 0.9 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-C4_Topoisom PF01396.14 gi|15669415|ref|NP_248225.1| - 0.043 13.3 1.3 1 8.9 0.2 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DNA_RNApol_7kD PF03604.8 gi|15669415|ref|NP_248225.1| - 0.049 13.1 2.6 0.23 10.9 0.1 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.5 gi|15669415|ref|NP_248225.1| - 0.054 13.4 0.5 3.6 7.5 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|15669415|ref|NP_248225.1| - 0.056 13.0 2.8 3 7.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF2387 PF09526.5 gi|15669415|ref|NP_248225.1| - 0.073 12.9 1.7 0.46 10.4 1.2 1.9 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Ribosomal_S27e PF01667.12 gi|15669415|ref|NP_248225.1| - 0.081 12.4 1.2 3.7 7.1 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein S27 ZZ PF00569.12 gi|15669415|ref|NP_248225.1| - 0.086 12.3 0.6 2 8.0 0.0 2.1 2 0 0 2 2 2 0 Zinc finger, ZZ type Elf1 PF05129.8 gi|15669415|ref|NP_248225.1| - 0.096 12.3 1.7 0.16 11.7 1.2 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like YokU PF14122.1 gi|15669415|ref|NP_248225.1| - 0.12 12.1 0.2 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 YokU-like protein zf-TFIIB PF13453.1 gi|15669415|ref|NP_248225.1| - 0.12 11.5 0.5 0.3 10.3 0.4 1.6 1 1 0 1 1 1 0 Transcription factor zinc-finger zf-trcl PF13451.1 gi|15669415|ref|NP_248225.1| - 0.13 11.8 2.2 4.5 6.9 0.1 2.2 2 0 0 2 2 2 0 Probable zinc-binding domain OrfB_Zn_ribbon PF07282.6 gi|15669415|ref|NP_248225.1| - 0.15 11.7 1.1 6.1 6.5 0.2 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-Mss51 PF13824.1 gi|15669415|ref|NP_248225.1| - 0.17 11.7 2.9 6.7 6.6 0.1 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 FeS PF04060.8 gi|15669415|ref|NP_248225.1| - 0.19 11.3 1.8 0.36 10.4 0.0 2.0 2 0 0 2 2 2 0 Putative Fe-S cluster zinc_ribbon_2 PF13240.1 gi|15669415|ref|NP_248225.1| - 0.23 10.9 7.8 1.6 8.3 1.8 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2296 PF10058.4 gi|15669415|ref|NP_248225.1| - 0.29 10.9 2.2 2.8 7.7 0.1 2.3 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) zf-HIT PF04438.11 gi|15669415|ref|NP_248225.1| - 0.3 10.7 3.2 1.3 8.7 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger ADK_lid PF05191.9 gi|15669415|ref|NP_248225.1| - 0.46 10.1 2.2 6.4 6.5 0.2 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid DZR PF12773.2 gi|15669415|ref|NP_248225.1| - 0.6 9.9 2.9 3.7 7.4 2.0 1.9 1 1 0 1 1 1 0 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|15669415|ref|NP_248225.1| - 1 9.1 6.6 5.7 6.7 0.1 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DUF1610 PF07754.6 gi|15669415|ref|NP_248225.1| - 1.3 9.1 6.5 1.1 9.4 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-C2H2 PF00096.21 gi|15669415|ref|NP_248225.1| - 3 8.3 5.1 21 5.7 0.2 2.5 3 0 0 3 3 2 0 Zinc finger, C2H2 type PYC_OADA PF02436.13 gi|15669416|ref|NP_248226.1| - 1.3e-69 233.5 0.3 2.9e-69 232.4 0.2 1.6 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.14 gi|15669416|ref|NP_248226.1| - 5.9e-44 150.5 0.0 7.9e-44 150.0 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.17 gi|15669416|ref|NP_248226.1| - 1.2e-20 72.8 6.7 1.2e-20 72.8 4.6 2.2 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|15669416|ref|NP_248226.1| - 8.1e-18 63.8 2.4 1e-08 34.6 0.1 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD PF00529.15 gi|15669416|ref|NP_248226.1| - 2.4e-09 36.9 2.4 7.9e-05 22.1 0.1 2.2 1 1 1 2 2 2 2 HlyD family secretion protein HlyD_2 PF12700.2 gi|15669416|ref|NP_248226.1| - 3.7e-08 32.9 1.6 3.6e-05 23.1 0.1 2.5 1 1 1 2 2 2 2 HlyD family secretion protein RnfC_N PF13375.1 gi|15669416|ref|NP_248226.1| - 2.8e-05 23.7 3.1 5.7e-05 22.7 1.3 2.2 2 1 0 2 2 2 1 RnfC Barrel sandwich hybrid domain NQRA PF05896.6 gi|15669416|ref|NP_248226.1| - 8.4e-05 21.8 1.0 0.00015 21.0 0.7 1.4 1 0 0 1 1 1 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HlyD_3 PF13437.1 gi|15669416|ref|NP_248226.1| - 0.00015 22.0 2.8 0.26 11.6 0.0 3.1 3 0 0 3 3 3 2 HlyD family secretion protein TGT PF01702.13 gi|15669416|ref|NP_248226.1| - 0.00038 19.8 0.1 0.00066 19.0 0.1 1.3 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase GCV_H PF01597.14 gi|15669416|ref|NP_248226.1| - 0.0017 18.0 2.5 0.0046 16.6 1.2 2.2 1 1 1 2 2 2 1 Glycine cleavage H-protein DUF561 PF04481.7 gi|15669416|ref|NP_248226.1| - 0.0021 17.0 0.0 1.7 7.5 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF561) DUF2118 PF09891.4 gi|15669416|ref|NP_248226.1| - 0.0029 17.3 1.0 0.0099 15.5 0.3 2.1 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) QRPTase_N PF02749.11 gi|15669416|ref|NP_248226.1| - 0.05 13.4 0.2 2 8.2 0.0 2.6 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, N-terminal domain Peptidase_M23 PF01551.17 gi|15669416|ref|NP_248226.1| - 0.11 12.5 0.6 0.99 9.5 0.1 2.4 1 1 1 2 2 2 0 Peptidase family M23 PYNP_C PF07831.8 gi|15669416|ref|NP_248226.1| - 0.42 10.0 4.1 1.1 8.7 0.2 2.8 3 0 0 3 3 3 0 Pyrimidine nucleoside phosphorylase C-terminal domain HrcA_DNA-bdg PF03444.10 gi|15669417|ref|NP_248227.1| - 5.2e-38 128.3 1.0 7.2e-38 127.8 0.1 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.23 gi|15669417|ref|NP_248227.1| - 6.7e-33 112.2 6.5 9.2e-20 70.1 1.0 2.8 3 0 0 3 3 3 2 CBS domain HTH_11 PF08279.7 gi|15669417|ref|NP_248227.1| - 3.9e-07 29.6 0.2 1.2e-06 27.9 0.0 2.0 2 0 0 2 2 2 1 HTH domain Rrf2 PF02082.15 gi|15669417|ref|NP_248227.1| - 1.4e-06 28.3 0.0 4.4e-06 26.7 0.0 1.9 2 0 0 2 2 1 1 Transcriptional regulator HTH_38 PF13936.1 gi|15669417|ref|NP_248227.1| - 0.00067 19.1 0.1 0.0018 17.8 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.2 gi|15669417|ref|NP_248227.1| - 0.016 14.9 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|15669417|ref|NP_248227.1| - 0.02 15.2 0.1 0.057 13.7 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|15669417|ref|NP_248227.1| - 0.022 14.1 0.9 0.13 11.6 0.5 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|15669417|ref|NP_248227.1| - 0.048 13.3 0.0 0.088 12.4 0.0 1.4 1 0 0 1 1 1 0 MarR family Phage_terminase PF10668.4 gi|15669417|ref|NP_248227.1| - 0.085 12.6 0.2 0.88 9.4 0.0 2.4 2 0 0 2 2 2 0 Phage terminase small subunit HTH_5 PF01022.15 gi|15669417|ref|NP_248227.1| - 0.12 12.1 0.0 0.29 10.8 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Aconitase_2_N PF06434.8 gi|15669417|ref|NP_248227.1| - 0.13 11.6 1.4 0.27 10.6 0.9 1.7 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus Methyltransf_26 PF13659.1 gi|15669418|ref|NP_248228.1| - 9.7e-15 54.6 0.0 1.5e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669418|ref|NP_248228.1| - 7.7e-12 45.0 0.1 1.9e-11 43.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669418|ref|NP_248228.1| - 2.2e-11 44.3 0.0 4.2e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|15669418|ref|NP_248228.1| - 3.4e-10 40.2 0.0 2.8e-09 37.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|15669418|ref|NP_248228.1| - 9.2e-09 34.8 0.0 1.5e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.10 gi|15669418|ref|NP_248228.1| - 5.4e-08 32.4 0.0 9.5e-08 31.6 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Spermine_synth PF01564.12 gi|15669418|ref|NP_248228.1| - 1.5e-07 30.6 0.0 4.6e-07 29.0 0.0 1.6 1 1 0 1 1 1 1 Spermine/spermidine synthase Ubie_methyltran PF01209.13 gi|15669418|ref|NP_248228.1| - 4.1e-07 29.3 0.0 3.3e-06 26.3 0.0 2.1 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Met_10 PF02475.11 gi|15669418|ref|NP_248228.1| - 7.1e-07 29.0 0.1 1.6e-06 27.8 0.0 1.6 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_15 PF09445.5 gi|15669418|ref|NP_248228.1| - 1e-05 25.1 0.0 1.8e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_N4_Mtase PF01555.13 gi|15669418|ref|NP_248228.1| - 1.2e-05 24.9 0.4 0.0026 17.2 0.0 2.8 3 0 0 3 3 3 1 DNA methylase Methyltransf_30 PF05430.6 gi|15669418|ref|NP_248228.1| - 1.2e-05 24.9 0.0 2.9e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase UPF0020 PF01170.13 gi|15669418|ref|NP_248228.1| - 3.4e-05 23.4 0.0 5.9e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|15669418|ref|NP_248228.1| - 6.5e-05 23.2 0.0 0.00012 22.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669418|ref|NP_248228.1| - 0.00013 21.7 0.0 0.00038 20.2 0.0 1.8 2 1 0 2 2 1 1 Methyltransferase domain PCMT PF01135.14 gi|15669418|ref|NP_248228.1| - 0.00099 18.6 0.1 0.011 15.2 0.1 2.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.15 gi|15669418|ref|NP_248228.1| - 0.0077 15.3 0.0 0.014 14.5 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase SAM_MT PF04445.8 gi|15669418|ref|NP_248228.1| - 0.0093 15.1 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase N6_Mtase PF02384.11 gi|15669418|ref|NP_248228.1| - 0.01 14.9 0.0 0.023 13.7 0.0 1.5 1 0 0 1 1 1 0 N-6 DNA Methylase Methyltransf_24 PF13578.1 gi|15669418|ref|NP_248228.1| - 0.014 16.2 0.0 0.03 15.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Glyco_transf_4 PF13439.1 gi|15669418|ref|NP_248228.1| - 0.11 12.2 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 DUF1965 PF09248.5 gi|15669418|ref|NP_248228.1| - 0.13 12.1 0.0 2.5 8.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1965) Cas_Cas6 PF01881.11 gi|15669419|ref|NP_248229.1| - 3.1e-34 118.4 6.8 5.2e-34 117.7 4.7 1.3 1 0 0 1 1 1 1 CRISPR associated protein Cas6 RuBisCO_large PF00016.15 gi|15669420|ref|NP_248230.1| - 6.2e-85 284.7 0.3 8.2e-85 284.3 0.2 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.11 gi|15669420|ref|NP_248230.1| - 3.2e-21 75.3 0.0 7.2e-18 64.4 0.0 2.6 2 1 0 2 2 2 2 Ribulose bisphosphate carboxylase large chain, N-terminal domain Beta-Casp PF10996.3 gi|15669421|ref|NP_248231.1| - 1.7e-35 121.6 0.0 4.9e-35 120.2 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|15669421|ref|NP_248231.1| - 3.7e-25 88.6 1.2 6.4e-25 87.9 0.8 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|15669421|ref|NP_248231.1| - 3.9e-14 52.1 0.6 1.8e-13 50.0 0.0 2.6 3 0 0 3 3 3 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|15669421|ref|NP_248231.1| - 1.1e-09 38.1 0.2 4.1e-09 36.2 0.1 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_2 PF07650.12 gi|15669421|ref|NP_248231.1| - 2.4e-05 23.7 8.4 3.3e-05 23.3 0.9 3.3 1 1 1 2 2 2 1 KH domain Lactamase_B_3 PF13483.1 gi|15669421|ref|NP_248231.1| - 0.00021 21.0 0.0 0.00076 19.2 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_4 PF13083.1 gi|15669421|ref|NP_248231.1| - 0.0011 18.6 0.3 0.0011 18.6 0.2 2.1 2 0 0 2 2 2 1 KH domain KH_1 PF00013.24 gi|15669421|ref|NP_248231.1| - 0.037 13.6 1.1 0.14 11.7 0.7 2.1 1 0 0 1 1 1 0 KH domain Proteasome PF00227.21 gi|15669422|ref|NP_248232.1| - 1.7e-58 197.0 0.1 2.1e-58 196.7 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit RuvA_C PF07499.8 gi|15669422|ref|NP_248232.1| - 0.067 13.3 0.1 0.32 11.1 0.0 2.1 2 0 0 2 2 2 0 RuvA, C-terminal domain ProRS-C_2 PF09181.5 gi|15669423|ref|NP_248233.1| - 4.7e-30 103.3 5.4 4.7e-30 103.3 3.8 2.5 3 0 0 3 3 3 1 Prolyl-tRNA synthetase, C-terminal tRNA-synt_2b PF00587.20 gi|15669423|ref|NP_248233.1| - 2.3e-23 82.6 0.4 2.3e-23 82.6 0.3 2.2 3 0 0 3 3 3 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|15669423|ref|NP_248233.1| - 3e-20 71.9 0.9 7.9e-20 70.6 0.6 1.7 1 0 0 1 1 1 1 Anticodon binding domain LEDGF PF11467.3 gi|15669423|ref|NP_248233.1| - 0.054 13.2 0.2 0.7 9.6 0.0 2.5 2 0 0 2 2 2 0 Lens epithelium-derived growth factor (LEDGF) ProRS-C_1 PF09180.6 gi|15669423|ref|NP_248233.1| - 0.055 13.3 0.8 0.94 9.4 0.1 2.6 2 1 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal DUF3882 PF07066.6 gi|15669424|ref|NP_248234.1| - 0.057 13.2 3.9 0.068 13.0 0.6 2.3 1 1 1 2 2 2 0 Lactococcus phage M3 protein DIX PF00778.12 gi|15669424|ref|NP_248234.1| - 0.11 12.2 1.2 1.7 8.4 0.1 2.6 2 1 0 2 2 2 0 DIX domain DUF1091 PF06477.8 gi|15669425|ref|NP_248235.1| - 0.034 14.5 0.5 0.04 14.3 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1091) DMPK_coil PF08826.5 gi|15669425|ref|NP_248235.1| - 0.081 12.8 1.3 0.13 12.2 0.9 1.3 1 0 0 1 1 1 0 DMPK coiled coil domain like FliL PF03748.9 gi|15669425|ref|NP_248235.1| - 0.11 12.4 0.3 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL YtxH PF12732.2 gi|15669425|ref|NP_248235.1| - 1.8 8.9 5.6 6.2 7.2 3.9 1.8 1 1 0 1 1 1 0 YtxH-like protein KaiC PF06745.8 gi|15669426|ref|NP_248236.1| - 1.9e-05 23.9 0.0 2.1e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.1 gi|15669426|ref|NP_248236.1| - 2.5e-05 24.3 0.0 2.7e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain Thymidylate_kin PF02223.12 gi|15669426|ref|NP_248236.1| - 0.00029 20.2 0.1 0.00033 20.0 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_30 PF13604.1 gi|15669426|ref|NP_248236.1| - 0.00093 18.8 0.0 0.001 18.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_35 PF14516.1 gi|15669426|ref|NP_248236.1| - 0.00094 17.9 0.0 0.001 17.7 0.0 1.0 1 0 0 1 1 1 1 AAA-like domain APS_kinase PF01583.15 gi|15669426|ref|NP_248236.1| - 0.001 18.7 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase MobB PF03205.9 gi|15669426|ref|NP_248236.1| - 0.0012 18.5 0.2 0.0016 18.1 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.1 gi|15669426|ref|NP_248236.1| - 0.0019 18.3 0.1 0.0021 18.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|15669426|ref|NP_248236.1| - 0.0037 16.7 0.0 0.0043 16.5 0.0 1.1 1 0 0 1 1 1 1 AAA-like domain Arch_ATPase PF01637.13 gi|15669426|ref|NP_248236.1| - 0.0045 16.7 0.1 0.0047 16.6 0.0 1.1 1 0 0 1 1 1 1 Archaeal ATPase NACHT PF05729.7 gi|15669426|ref|NP_248236.1| - 0.0054 16.4 0.0 0.0062 16.2 0.0 1.1 1 0 0 1 1 1 1 NACHT domain ArgK PF03308.11 gi|15669426|ref|NP_248236.1| - 0.0055 15.5 0.0 0.0061 15.3 0.0 1.0 1 0 0 1 1 1 1 ArgK protein AAA_33 PF13671.1 gi|15669426|ref|NP_248236.1| - 0.0058 16.5 0.0 0.0078 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.17 gi|15669426|ref|NP_248236.1| - 0.0061 15.4 0.0 0.0061 15.4 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain IstB_IS21 PF01695.12 gi|15669426|ref|NP_248236.1| - 0.0086 15.5 0.0 0.0087 15.4 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein SRP54 PF00448.17 gi|15669426|ref|NP_248236.1| - 0.016 14.6 0.1 0.019 14.3 0.1 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_19 PF13245.1 gi|15669426|ref|NP_248236.1| - 0.018 14.7 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Part of AAA domain AAA PF00004.24 gi|15669426|ref|NP_248236.1| - 0.018 15.2 0.1 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.10 gi|15669426|ref|NP_248236.1| - 0.019 14.6 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.1 gi|15669426|ref|NP_248236.1| - 0.019 15.2 0.3 0.034 14.4 0.1 1.5 2 0 0 2 2 1 0 AAA domain AAA_5 PF07728.9 gi|15669426|ref|NP_248236.1| - 0.023 14.4 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.21 gi|15669426|ref|NP_248236.1| - 0.025 14.0 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain Gtr1_RagA PF04670.7 gi|15669426|ref|NP_248236.1| - 0.046 12.8 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region KTI12 PF08433.5 gi|15669426|ref|NP_248236.1| - 0.046 12.9 0.0 0.056 12.6 0.0 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ATP-synt_ab PF00006.20 gi|15669426|ref|NP_248236.1| - 0.054 12.9 0.0 0.056 12.9 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ABC_tran PF00005.22 gi|15669426|ref|NP_248236.1| - 0.055 13.7 0.0 0.06 13.6 0.0 1.1 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.1 gi|15669426|ref|NP_248236.1| - 0.056 14.2 0.1 0.076 13.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.13 gi|15669426|ref|NP_248236.1| - 0.056 12.9 0.0 0.072 12.6 0.0 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_14 PF13173.1 gi|15669426|ref|NP_248236.1| - 0.059 13.2 0.1 0.067 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|15669426|ref|NP_248236.1| - 0.062 13.1 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_24 PF13479.1 gi|15669426|ref|NP_248236.1| - 0.1 12.1 0.2 0.11 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain LpxK PF02606.9 gi|15669426|ref|NP_248236.1| - 0.12 11.3 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase T2SE PF00437.15 gi|15669426|ref|NP_248236.1| - 0.12 11.2 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein PIF1 PF05970.9 gi|15669426|ref|NP_248236.1| - 0.12 11.2 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase ABC_tran PF00005.22 gi|15669427|ref|NP_248237.1| - 2.3e-54 183.3 0.0 2.3e-26 92.6 0.0 2.5 3 0 0 3 3 2 2 ABC transporter AAA_21 PF13304.1 gi|15669427|ref|NP_248237.1| - 6.7e-12 45.9 0.3 0.0042 17.0 0.1 4.2 3 1 0 3 3 3 2 AAA domain DUF258 PF03193.11 gi|15669427|ref|NP_248237.1| - 1.2e-07 31.1 0.2 0.012 14.8 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|15669427|ref|NP_248237.1| - 8.9e-07 28.3 0.7 0.046 12.9 0.0 3.5 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.1 gi|15669427|ref|NP_248237.1| - 5.9e-06 26.3 0.0 0.038 13.9 0.0 2.7 3 0 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.1 gi|15669427|ref|NP_248237.1| - 6.4e-06 25.6 0.5 0.03 13.8 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|15669427|ref|NP_248237.1| - 8.6e-05 21.7 6.3 0.00054 19.1 0.0 3.6 3 1 0 3 3 3 1 AAA ATPase domain AAA_22 PF13401.1 gi|15669427|ref|NP_248237.1| - 0.0002 21.5 2.2 0.62 10.1 0.1 3.2 2 2 0 2 2 2 2 AAA domain SbcCD_C PF13558.1 gi|15669427|ref|NP_248237.1| - 0.00021 21.1 0.0 0.21 11.5 0.0 3.2 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|15669427|ref|NP_248237.1| - 0.00057 19.4 3.4 0.72 9.2 0.3 3.5 3 1 0 3 3 3 2 AAA-like domain Zeta_toxin PF06414.7 gi|15669427|ref|NP_248237.1| - 0.00063 18.8 4.2 0.48 9.4 0.0 3.9 4 0 0 4 4 4 1 Zeta toxin NB-ARC PF00931.17 gi|15669427|ref|NP_248237.1| - 0.0011 17.9 0.2 0.085 11.7 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain Mg_chelatase PF01078.16 gi|15669427|ref|NP_248237.1| - 0.0025 16.9 0.0 0.048 12.8 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_23 PF13476.1 gi|15669427|ref|NP_248237.1| - 0.0046 17.3 4.6 0.085 13.1 0.0 2.9 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|15669427|ref|NP_248237.1| - 0.005 16.7 0.2 0.71 9.7 0.1 2.7 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|15669427|ref|NP_248237.1| - 0.0053 17.0 2.8 0.13 12.5 0.1 3.3 4 0 0 4 4 3 1 AAA domain UPF0079 PF02367.12 gi|15669427|ref|NP_248237.1| - 0.0081 15.7 1.0 0.24 11.0 0.0 2.6 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_19 PF13245.1 gi|15669427|ref|NP_248237.1| - 0.0096 15.6 1.8 0.13 11.9 0.2 2.9 3 1 0 3 3 2 1 Part of AAA domain AAA_25 PF13481.1 gi|15669427|ref|NP_248237.1| - 0.013 14.8 1.0 1.5 8.2 0.0 2.7 3 0 0 3 3 2 0 AAA domain IstB_IS21 PF01695.12 gi|15669427|ref|NP_248237.1| - 0.018 14.4 1.2 3.4 7.0 0.0 3.3 4 0 0 4 4 3 0 IstB-like ATP binding protein AAA_17 PF13207.1 gi|15669427|ref|NP_248237.1| - 0.018 15.8 1.3 0.018 15.8 0.9 3.1 3 2 0 3 3 2 0 AAA domain MobB PF03205.9 gi|15669427|ref|NP_248237.1| - 0.036 13.7 3.5 0.28 10.8 0.0 3.4 4 0 0 4 4 4 0 Molybdopterin guanine dinucleotide synthesis protein B PduV-EutP PF10662.4 gi|15669427|ref|NP_248237.1| - 0.04 13.3 0.1 1.4 8.3 0.0 2.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA PF00004.24 gi|15669427|ref|NP_248237.1| - 0.042 14.0 2.7 0.3 11.2 0.1 3.3 4 0 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.1 gi|15669427|ref|NP_248237.1| - 0.046 13.2 0.1 2.9 7.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain Miro PF08477.8 gi|15669427|ref|NP_248237.1| - 0.051 14.0 1.1 6.3 7.3 0.0 2.9 3 0 0 3 3 2 0 Miro-like protein ATP-synt_ab PF00006.20 gi|15669427|ref|NP_248237.1| - 0.056 12.9 0.0 0.23 10.9 0.0 2.1 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF2225 PF09986.4 gi|15669427|ref|NP_248237.1| - 0.065 12.6 0.1 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) FtsK_SpoIIIE PF01580.13 gi|15669427|ref|NP_248237.1| - 0.073 12.5 0.4 5.6 6.3 0.1 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_28 PF13521.1 gi|15669427|ref|NP_248237.1| - 0.099 12.5 0.3 1.8 8.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain RNA_helicase PF00910.17 gi|15669427|ref|NP_248237.1| - 0.1 12.7 0.6 7.6 6.7 0.0 2.9 3 0 0 3 3 2 0 RNA helicase MMR_HSR1 PF01926.18 gi|15669427|ref|NP_248237.1| - 0.19 11.6 3.2 8.7 6.3 0.2 3.5 3 1 0 3 3 3 0 50S ribosome-binding GTPase Terminase_2 PF03592.11 gi|15669427|ref|NP_248237.1| - 0.24 11.7 1.7 16 5.7 0.0 2.4 2 0 0 2 2 2 0 Terminase small subunit NOB1_Zn_bind PF08772.6 gi|15669427|ref|NP_248237.1| - 0.25 11.2 1.5 0.91 9.3 1.0 1.9 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like NACHT PF05729.7 gi|15669427|ref|NP_248237.1| - 0.26 10.9 7.6 3.5 7.2 0.3 3.2 3 0 0 3 3 3 0 NACHT domain zinc_ribbon_2 PF13240.1 gi|15669427|ref|NP_248237.1| - 0.28 10.7 3.9 2.7 7.5 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain AAA_24 PF13479.1 gi|15669427|ref|NP_248237.1| - 0.32 10.5 2.7 9.2 5.7 0.3 2.4 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|15669427|ref|NP_248237.1| - 0.87 9.3 9.9 2.6 7.8 0.0 3.3 2 1 1 3 3 3 0 Domain of unknown function DUF87 DUF134 PF02001.11 gi|15669428|ref|NP_248238.1| - 1.9e-42 143.4 0.1 2.2e-42 143.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.7 gi|15669428|ref|NP_248238.1| - 4e-05 22.9 0.1 6.3e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.11 gi|15669428|ref|NP_248238.1| - 0.0025 17.0 0.1 0.0044 16.3 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_8 PF02954.14 gi|15669428|ref|NP_248238.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_17 PF12728.2 gi|15669428|ref|NP_248238.1| - 0.019 15.1 0.9 0.036 14.3 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.17 gi|15669428|ref|NP_248238.1| - 0.048 13.5 0.0 0.2 11.4 0.0 2.0 1 1 0 2 2 2 0 Helix-turn-helix HTH_23 PF13384.1 gi|15669428|ref|NP_248238.1| - 0.05 13.2 0.1 0.12 12.0 0.0 1.6 1 1 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.1 gi|15669428|ref|NP_248238.1| - 0.15 12.1 0.1 0.15 12.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Nit_Regul_Hom PF10126.4 gi|15669429|ref|NP_248239.1| - 1.9e-49 166.0 0.1 2e-49 165.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII Nit_Regul_Hom PF10126.4 gi|15669430|ref|NP_248240.1| - 9.9e-46 154.0 3.7 1.1e-45 153.9 2.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII AAA_32 PF13654.1 gi|15669430|ref|NP_248240.1| - 0.039 12.6 0.1 0.042 12.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain SpoU_methylase PF00588.14 gi|15669430|ref|NP_248240.1| - 0.047 13.5 0.0 0.061 13.1 0.0 1.2 1 0 0 1 1 1 0 SpoU rRNA Methylase family ATP-synt_F PF01990.12 gi|15669430|ref|NP_248240.1| - 0.072 13.4 0.2 0.09 13.1 0.1 1.2 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit Pox_TAA1 PF03295.9 gi|15669430|ref|NP_248240.1| - 0.085 12.5 0.2 0.15 11.7 0.1 1.4 1 0 0 1 1 1 0 Poxvirus trans-activator protein A1 C-terminal DnaJ PF00226.26 gi|15669430|ref|NP_248240.1| - 0.094 12.4 0.2 0.16 11.6 0.0 1.6 2 0 0 2 2 2 0 DnaJ domain Ferritin PF00210.19 gi|15669430|ref|NP_248240.1| - 0.1 12.3 0.5 0.15 11.8 0.4 1.3 1 0 0 1 1 1 0 Ferritin-like domain CoA_binding PF02629.14 gi|15669431|ref|NP_248241.1| - 1.7e-32 111.7 7.7 1.3e-31 108.9 2.0 2.5 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.14 gi|15669431|ref|NP_248241.1| - 2.8e-18 65.9 0.7 5.3e-18 65.0 0.5 1.5 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.1 gi|15669431|ref|NP_248241.1| - 6.6e-12 45.2 0.3 1.5e-11 44.0 0.0 1.7 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|15669431|ref|NP_248241.1| - 1.2e-06 28.6 0.0 1e-05 25.6 0.0 2.2 2 0 0 2 2 2 1 CoA binding domain GFO_IDH_MocA PF01408.17 gi|15669431|ref|NP_248241.1| - 0.0084 16.6 1.0 0.018 15.5 0.2 1.9 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.7 gi|15669431|ref|NP_248241.1| - 0.024 14.0 0.4 0.024 14.0 0.3 1.8 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain SIS PF01380.17 gi|15669432|ref|NP_248242.1| - 3.5e-16 59.0 0.0 4.8e-16 58.5 0.0 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.1 gi|15669432|ref|NP_248242.1| - 1e-08 34.9 1.3 4.6e-05 23.1 0.2 2.3 1 1 1 2 2 2 2 SIS domain 2-Hacid_dh_C PF02826.14 gi|15669432|ref|NP_248242.1| - 0.028 13.5 0.0 0.044 12.9 0.0 1.4 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PS_pyruv_trans PF04230.8 gi|15669432|ref|NP_248242.1| - 0.62 9.7 2.7 2.1 7.9 1.4 1.8 1 1 1 2 2 2 0 Polysaccharide pyruvyl transferase DUF2481 PF10654.4 gi|15669433|ref|NP_248243.1| - 0.088 12.5 0.1 0.2 11.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2481) DHQS PF01959.11 gi|15669434|ref|NP_248244.1| - 7.2e-158 524.8 4.4 8.1e-158 524.7 3.1 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) DUF2577 PF10844.3 gi|15669434|ref|NP_248244.1| - 0.0025 17.8 0.1 0.55 10.3 0.0 2.9 2 1 0 2 2 2 1 Protein of unknown function (DUF2577) CdhD PF03599.11 gi|15669434|ref|NP_248244.1| - 0.0026 16.2 2.8 0.53 8.7 0.4 2.2 1 1 1 2 2 2 2 CO dehydrogenase/acetyl-CoA synthase delta subunit Hint PF01079.15 gi|15669434|ref|NP_248244.1| - 0.005 16.0 0.0 0.15 11.2 0.0 2.3 2 0 0 2 2 2 1 Hint module Dicty_CAR PF05462.6 gi|15669435|ref|NP_248245.1| - 0.22 10.4 9.7 0.25 10.1 6.7 1.2 1 0 0 1 1 1 0 Slime mold cyclic AMP receptor DUF3397 PF11877.3 gi|15669435|ref|NP_248245.1| - 0.34 10.9 15.9 0.96 9.4 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) DUF1673 PF07895.6 gi|15669435|ref|NP_248245.1| - 0.48 9.9 10.6 0.6 9.6 7.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Tic20 PF09685.5 gi|15669435|ref|NP_248245.1| - 1.8 8.5 12.8 0.64 10.0 3.6 2.2 2 0 0 2 2 2 0 Tic20-like protein Halogen_Hydrol PF10112.4 gi|15669435|ref|NP_248245.1| - 4.1 6.7 5.6 5.9 6.2 1.0 2.0 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PcrB PF01884.12 gi|15669436|ref|NP_248246.1| - 2.1e-102 341.3 2.9 2.4e-102 341.1 2.0 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|15669436|ref|NP_248246.1| - 4.7e-05 22.7 0.5 0.00024 20.4 0.0 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein Trp_syntA PF00290.15 gi|15669436|ref|NP_248246.1| - 0.00028 19.5 0.2 0.16 10.4 0.0 2.3 2 0 0 2 2 2 2 Tryptophan synthase alpha chain NanE PF04131.9 gi|15669436|ref|NP_248246.1| - 0.0011 17.9 0.5 0.23 10.3 0.0 2.5 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.16 gi|15669436|ref|NP_248246.1| - 0.012 14.5 1.0 0.017 14.1 0.1 1.6 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase BtpA PF03437.10 gi|15669436|ref|NP_248246.1| - 0.013 14.7 0.1 0.65 9.2 0.0 2.1 2 0 0 2 2 2 0 BtpA family MoCF_biosynth PF00994.19 gi|15669436|ref|NP_248246.1| - 0.019 14.3 0.0 0.056 12.8 0.0 1.8 2 0 0 2 2 2 0 Probable molybdopterin binding domain Spore_YhaL PF14147.1 gi|15669436|ref|NP_248246.1| - 0.02 14.3 0.7 0.047 13.1 0.5 1.7 1 0 0 1 1 1 0 Sporulation protein YhaL DUF535 PF04393.8 gi|15669436|ref|NP_248246.1| - 0.057 12.3 0.0 0.078 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF535) Methyltransf_11 PF08241.7 gi|15669437|ref|NP_248247.1| - 4.5e-20 71.9 0.1 1.3e-19 70.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669437|ref|NP_248247.1| - 2.8e-14 53.1 0.0 3.8e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669437|ref|NP_248247.1| - 2.7e-12 46.5 1.5 4.6e-12 45.7 1.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|15669437|ref|NP_248247.1| - 1.7e-11 43.7 2.2 3.4e-11 42.7 1.5 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|15669437|ref|NP_248247.1| - 1.5e-10 41.3 0.0 5.5e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669437|ref|NP_248247.1| - 1.5e-09 38.1 0.0 3.7e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|15669437|ref|NP_248247.1| - 1.2e-07 31.6 2.6 1.5e-06 28.0 0.4 2.1 1 1 1 2 2 2 1 Hypothetical methyltransferase CMAS PF02353.15 gi|15669437|ref|NP_248247.1| - 4.1e-07 29.3 0.2 8.8e-07 28.2 0.1 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.2 gi|15669437|ref|NP_248247.1| - 1.1e-06 29.1 0.0 3.1e-06 27.7 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain MetW PF07021.7 gi|15669437|ref|NP_248247.1| - 6.4e-06 25.6 0.1 9.7e-06 25.0 0.1 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW N6_N4_Mtase PF01555.13 gi|15669437|ref|NP_248247.1| - 0.001 18.6 4.5 0.23 10.9 1.2 2.5 2 1 0 2 2 2 2 DNA methylase Methyltransf_26 PF13659.1 gi|15669437|ref|NP_248247.1| - 0.0076 16.2 0.0 0.077 13.0 0.0 2.3 2 1 0 2 2 2 1 Methyltransferase domain RrnaAD PF00398.15 gi|15669437|ref|NP_248247.1| - 0.0097 14.9 0.1 0.019 13.9 0.0 1.5 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|15669437|ref|NP_248247.1| - 0.011 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) p450 PF00067.17 gi|15669437|ref|NP_248247.1| - 0.019 13.5 2.3 0.026 13.0 0.1 1.9 2 0 0 2 2 2 0 Cytochrome P450 DUF3635 PF12330.3 gi|15669437|ref|NP_248247.1| - 0.04 13.9 1.6 0.052 13.6 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3635) UPF0254 PF06787.6 gi|15669438|ref|NP_248248.1| - 3.7e-69 231.3 0.2 4.1e-69 231.1 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0254) Ubiq-assoc PF09145.5 gi|15669438|ref|NP_248248.1| - 0.0012 18.6 5.6 0.015 15.1 0.1 3.6 4 0 0 4 4 4 1 Ubiquitin-associated CinA PF02464.12 gi|15669438|ref|NP_248248.1| - 0.12 11.8 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Competence-damaged protein SecD_SecF PF02355.11 gi|15669439|ref|NP_248249.1| - 4e-52 176.1 14.9 5.9e-52 175.6 10.3 1.2 1 0 0 1 1 1 1 Protein export membrane protein Patched PF02460.13 gi|15669439|ref|NP_248249.1| - 1.4e-06 26.5 10.7 2.1e-06 25.9 7.4 1.2 1 0 0 1 1 1 1 Patched family Sec_GG PF07549.9 gi|15669439|ref|NP_248249.1| - 1.4e-05 24.0 0.2 3.2e-05 22.8 0.1 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Sterol-sensing PF12349.3 gi|15669439|ref|NP_248249.1| - 0.0001 21.7 6.6 0.00021 20.7 4.6 1.5 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.14 gi|15669439|ref|NP_248249.1| - 0.0096 13.3 11.5 0.012 13.0 8.0 1.2 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF3043 PF11241.3 gi|15669439|ref|NP_248249.1| - 5.3 6.6 12.0 3 7.4 0.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) HTH_24 PF13412.1 gi|15669440|ref|NP_248250.1| - 1.2e-09 37.3 0.7 1.2e-09 37.3 0.5 2.7 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|15669440|ref|NP_248250.1| - 1.9e-05 24.2 0.9 6.6e-05 22.5 0.1 2.3 2 0 0 2 2 1 1 MarR family MarR_2 PF12802.2 gi|15669440|ref|NP_248250.1| - 2.8e-05 23.6 0.0 6.4e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|15669440|ref|NP_248250.1| - 8.5e-05 22.1 2.0 0.0002 21.0 0.1 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|15669440|ref|NP_248250.1| - 0.00016 21.1 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TFIIE_alpha PF02002.12 gi|15669440|ref|NP_248250.1| - 0.00058 19.3 0.4 0.00058 19.3 0.3 3.1 2 2 0 2 2 1 1 TFIIE alpha subunit IncA PF04156.9 gi|15669440|ref|NP_248250.1| - 0.00074 19.1 14.7 0.0016 18.0 10.1 1.6 1 1 0 1 1 1 1 IncA protein HTH_27 PF13463.1 gi|15669440|ref|NP_248250.1| - 0.0014 18.9 0.3 0.0051 17.1 0.2 2.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_37 PF13744.1 gi|15669440|ref|NP_248250.1| - 0.0014 18.3 0.0 0.0058 16.3 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|15669440|ref|NP_248250.1| - 0.0016 18.1 0.6 0.0042 16.8 0.1 1.9 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain Tropomyosin_1 PF12718.2 gi|15669440|ref|NP_248250.1| - 0.0045 16.8 24.5 0.062 13.1 6.9 2.2 1 1 1 2 2 2 2 Tropomyosin like Leu_zip PF15294.1 gi|15669440|ref|NP_248250.1| - 0.0091 15.1 6.0 0.0091 15.1 4.2 2.4 1 1 1 2 2 2 1 Leucine zipper HTH_DeoR PF08220.7 gi|15669440|ref|NP_248250.1| - 0.011 15.3 0.2 0.028 13.9 0.2 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DUF977 PF06163.6 gi|15669440|ref|NP_248250.1| - 0.015 15.0 1.2 0.038 13.7 0.1 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) Phage_rep_O PF04492.8 gi|15669440|ref|NP_248250.1| - 0.019 15.1 2.1 0.032 14.4 0.1 2.3 2 1 0 2 2 2 0 Bacteriophage replication protein O DivIC PF04977.10 gi|15669440|ref|NP_248250.1| - 0.025 14.0 25.7 0.023 14.1 2.7 3.8 1 1 2 3 3 3 0 Septum formation initiator bZIP_1 PF00170.16 gi|15669440|ref|NP_248250.1| - 0.027 14.4 3.6 0.027 14.4 2.5 3.8 1 1 3 4 4 3 0 bZIP transcription factor Sigma70_r4 PF04545.11 gi|15669440|ref|NP_248250.1| - 0.036 13.3 0.0 0.095 12.0 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HemX PF04375.9 gi|15669440|ref|NP_248250.1| - 0.038 12.5 1.4 0.16 10.5 0.1 1.9 1 1 1 2 2 2 0 HemX Rio2_N PF09202.6 gi|15669440|ref|NP_248250.1| - 0.042 13.9 1.9 0.43 10.6 0.1 2.9 2 0 0 2 2 2 0 Rio2, N-terminal Reo_sigmaC PF04582.7 gi|15669440|ref|NP_248250.1| - 0.049 12.8 3.0 0.13 11.3 2.1 1.7 1 1 0 1 1 1 0 Reovirus sigma C capsid protein DUF972 PF06156.8 gi|15669440|ref|NP_248250.1| - 0.051 13.9 18.8 0.42 10.9 3.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF972) HTH_5 PF01022.15 gi|15669440|ref|NP_248250.1| - 0.056 13.1 0.1 0.15 11.7 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF489 PF04356.7 gi|15669440|ref|NP_248250.1| - 0.073 12.6 4.4 0.14 11.7 3.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF489) SlyX PF04102.7 gi|15669440|ref|NP_248250.1| - 0.089 13.1 8.3 1.1 9.6 0.2 3.2 1 1 2 3 3 3 0 SlyX Penicillinase_R PF03965.11 gi|15669440|ref|NP_248250.1| - 0.091 12.8 4.6 0.071 13.2 0.5 2.4 2 0 0 2 2 2 0 Penicillinase repressor Spc7 PF08317.6 gi|15669440|ref|NP_248250.1| - 0.093 11.3 24.1 0.16 10.5 8.8 2.2 1 1 0 2 2 2 0 Spc7 kinetochore protein HTH_23 PF13384.1 gi|15669440|ref|NP_248250.1| - 0.11 12.1 0.0 0.29 10.8 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_36 PF13730.1 gi|15669440|ref|NP_248250.1| - 0.13 12.3 0.0 0.13 12.3 0.0 3.3 4 0 0 4 4 2 0 Helix-turn-helix domain TMF_DNA_bd PF12329.3 gi|15669440|ref|NP_248250.1| - 0.16 11.7 30.2 0.92 9.3 9.6 2.7 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding ATG16 PF08614.6 gi|15669440|ref|NP_248250.1| - 0.17 11.6 23.6 1.3 8.8 14.7 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) ADIP PF11559.3 gi|15669440|ref|NP_248250.1| - 0.19 11.6 20.9 0.44 10.4 4.4 2.3 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding UPF0118 PF01594.11 gi|15669440|ref|NP_248250.1| - 0.19 10.6 6.5 0.063 12.2 0.2 2.6 2 1 1 3 3 3 0 Domain of unknown function DUF20 DUF2681 PF10883.3 gi|15669440|ref|NP_248250.1| - 0.25 11.5 11.3 0.059 13.5 1.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) Prefoldin PF02996.12 gi|15669440|ref|NP_248250.1| - 0.38 10.3 22.1 0.15 11.6 1.9 3.4 1 1 2 3 3 3 0 Prefoldin subunit Rootletin PF15035.1 gi|15669440|ref|NP_248250.1| - 0.53 10.2 13.7 2.3 8.1 9.5 1.8 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Ly49 PF08391.5 gi|15669440|ref|NP_248250.1| - 0.57 10.3 12.3 0.044 13.9 2.5 2.6 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region Mnd1 PF03962.10 gi|15669440|ref|NP_248250.1| - 0.72 9.4 23.0 1.2 8.7 10.7 2.4 2 1 0 2 2 2 0 Mnd1 family NEMO PF11577.3 gi|15669440|ref|NP_248250.1| - 1 9.1 12.9 0.96 9.2 3.3 3.3 2 1 0 2 2 2 0 NF-kappa-B essential modulator NEMO DUF869 PF05911.6 gi|15669440|ref|NP_248250.1| - 1.3 7.1 22.5 0.46 8.6 13.9 1.4 1 1 0 1 1 1 0 Plant protein of unknown function (DUF869) Med15 PF09606.5 gi|15669440|ref|NP_248250.1| - 1.5 6.9 4.5 2.1 6.4 3.1 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal OmpH PF03938.9 gi|15669440|ref|NP_248250.1| - 1.5 8.7 12.7 3.8 7.4 8.8 1.6 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.1 gi|15669440|ref|NP_248250.1| - 1.6 7.5 13.4 0.32 9.9 1.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.5 gi|15669440|ref|NP_248250.1| - 1.8 8.7 22.0 3.9 7.6 12.0 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4140 PF13600.1 gi|15669440|ref|NP_248250.1| - 1.9 8.9 10.0 17 5.9 0.1 3.7 2 1 2 4 4 3 0 N-terminal domain of unknown function (DUF4140) CDC37_N PF03234.9 gi|15669440|ref|NP_248250.1| - 2.2 8.5 21.3 1.2 9.4 13.2 1.6 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding IL6 PF00489.12 gi|15669440|ref|NP_248250.1| - 2.5 7.6 7.7 7.8 6.0 1.5 2.3 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family Macoilin PF09726.4 gi|15669440|ref|NP_248250.1| - 2.9 6.0 20.9 24 3.0 14.3 1.9 1 1 0 1 1 1 0 Transmembrane protein Snapin_Pallidin PF14712.1 gi|15669440|ref|NP_248250.1| - 3.7 7.9 15.8 4.8 7.5 2.7 2.6 1 1 1 2 2 2 0 Snapin/Pallidin TMPIT PF07851.8 gi|15669440|ref|NP_248250.1| - 3.8 6.5 17.9 0.19 10.7 3.1 2.4 1 1 1 2 2 2 0 TMPIT-like protein Atg14 PF10186.4 gi|15669440|ref|NP_248250.1| - 4.1 6.2 22.2 4.1 6.2 3.8 2.4 1 1 1 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 TBPIP PF07106.8 gi|15669440|ref|NP_248250.1| - 4.2 6.8 27.5 3.8 7.0 14.2 2.8 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF948 PF06103.6 gi|15669440|ref|NP_248250.1| - 4.3 7.2 10.7 9.9 6.1 1.8 3.0 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.7 gi|15669440|ref|NP_248250.1| - 5.5 6.8 14.5 2.8 7.7 2.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.9 gi|15669440|ref|NP_248250.1| - 6.2 6.3 19.7 1.9e+02 1.5 13.7 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) APG6 PF04111.7 gi|15669440|ref|NP_248250.1| - 8.2 5.3 21.3 4.5 6.2 12.8 1.9 1 1 0 1 1 1 0 Autophagy protein Apg6 Ead_Ea22 PF13935.1 gi|15669440|ref|NP_248250.1| - 8.3 6.7 14.2 1.6 9.0 3.3 2.4 1 1 1 2 2 2 0 Ead/Ea22-like protein AKNA PF12443.3 gi|15669440|ref|NP_248250.1| - 8.7 6.4 10.7 1.5 8.8 0.5 2.8 1 1 2 3 3 3 0 AT-hook-containing transcription factor Glyco_trans_1_3 PF13528.1 gi|15669441|ref|NP_248251.1| - 7.6e-42 143.6 0.0 1.2e-41 142.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|15669441|ref|NP_248251.1| - 8.4e-30 103.6 0.2 3.2e-29 101.7 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.13 gi|15669441|ref|NP_248251.1| - 2.6e-07 29.5 0.0 4.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase KH_5 PF13184.1 gi|15669441|ref|NP_248251.1| - 0.066 13.0 0.1 0.066 13.0 0.1 2.8 3 0 0 3 3 3 0 NusA-like KH domain MRP-S28 PF10213.4 gi|15669441|ref|NP_248251.1| - 2.2 8.3 5.1 0.52 10.3 0.8 1.9 3 0 0 3 3 3 0 Mitochondrial ribosomal subunit protein UPF0052 PF01933.13 gi|15669442|ref|NP_248252.1| - 1.7e-63 214.7 0.4 2.1e-63 214.4 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 THUMP PF02926.12 gi|15669443|ref|NP_248253.1| - 5.5e-29 100.9 4.8 5.5e-29 100.9 3.3 2.4 2 1 1 3 3 3 1 THUMP domain FtsJ PF01728.14 gi|15669443|ref|NP_248253.1| - 3.9e-12 46.5 0.0 6.2e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_23 PF13489.1 gi|15669443|ref|NP_248253.1| - 6.7e-06 25.9 0.0 2.9e-05 23.8 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669443|ref|NP_248253.1| - 0.041 13.4 1.0 0.14 11.7 0.7 1.9 1 0 0 1 1 1 0 Methyltransferase domain Cullin_Nedd8 PF10557.4 gi|15669443|ref|NP_248253.1| - 8.7 6.2 10.7 8.5 6.2 0.1 3.6 4 0 0 4 4 4 0 Cullin protein neddylation domain CBFD_NFYB_HMF PF00808.18 gi|15669444|ref|NP_248254.1| - 1.8e-17 63.1 1.5 1.9e-17 63.0 1.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|15669444|ref|NP_248254.1| - 6.4e-12 45.4 0.3 7.2e-12 45.2 0.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.12 gi|15669444|ref|NP_248254.1| - 1.4e-05 24.9 1.1 1.6e-05 24.7 0.8 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.1 gi|15669444|ref|NP_248254.1| - 4.9e-05 23.4 0.4 5.7e-05 23.2 0.2 1.2 1 1 0 1 1 1 1 Kinetochore component CENP-S Bromo_TP PF07524.8 gi|15669444|ref|NP_248254.1| - 0.019 14.6 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated TFIID-31kDa PF02291.10 gi|15669444|ref|NP_248254.1| - 0.021 14.6 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.8 gi|15669444|ref|NP_248254.1| - 0.024 14.8 0.1 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A TFIID-18kDa PF02269.11 gi|15669444|ref|NP_248254.1| - 0.053 13.3 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CENP-T PF15511.1 gi|15669444|ref|NP_248254.1| - 0.12 11.5 0.2 0.17 11.1 0.1 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T AA_kinase PF00696.23 gi|15669445|ref|NP_248255.1| - 1.1e-33 116.7 2.8 1.4e-33 116.4 2.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family Mur_ligase_C PF02875.16 gi|15669445|ref|NP_248255.1| - 0.1 12.6 0.0 2.9 7.9 0.0 2.7 2 1 0 2 2 2 0 Mur ligase family, glutamate ligase domain Ribosomal_S6e PF01092.14 gi|15669446|ref|NP_248256.1| - 2.6e-49 166.0 0.2 3e-49 165.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|15669447|ref|NP_248257.1| - 1.9e-44 151.3 0.0 2.9e-44 150.7 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|15669447|ref|NP_248257.1| - 7.7e-34 115.6 1.1 2.4e-33 114.0 0.1 2.1 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|15669447|ref|NP_248257.1| - 1.9e-06 27.9 0.9 1.9e-06 27.9 0.7 2.0 2 0 0 2 2 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|15669447|ref|NP_248257.1| - 0.0017 18.2 0.0 0.0063 16.4 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase PduV-EutP PF10662.4 gi|15669447|ref|NP_248257.1| - 0.0026 17.2 0.2 0.95 8.9 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation Nop10p PF04135.7 gi|15669447|ref|NP_248257.1| - 0.0034 17.0 1.9 0.0064 16.1 1.3 1.4 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.10 gi|15669447|ref|NP_248257.1| - 0.0044 16.4 2.4 0.0097 15.3 1.7 1.6 1 0 0 1 1 1 1 RecR protein FeoB_N PF02421.13 gi|15669447|ref|NP_248257.1| - 0.012 14.9 0.9 1.1 8.5 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B PolC_DP2 PF03833.8 gi|15669447|ref|NP_248257.1| - 0.018 12.7 0.1 0.026 12.2 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 MMR_HSR1_C PF08438.5 gi|15669447|ref|NP_248257.1| - 0.056 13.6 0.1 0.14 12.3 0.1 1.7 1 0 0 1 1 1 0 GTPase of unknown function C-terminal PhnA_Zn_Ribbon PF08274.7 gi|15669447|ref|NP_248257.1| - 0.064 13.0 0.1 3 7.7 0.0 2.6 1 1 1 2 2 2 0 PhnA Zinc-Ribbon zf-tcix PF14952.1 gi|15669447|ref|NP_248257.1| - 0.21 10.9 5.9 0.66 9.3 4.1 1.8 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding DUF35_N PF12172.3 gi|15669447|ref|NP_248257.1| - 0.22 11.4 1.5 0.41 10.6 1.1 1.5 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.1 gi|15669447|ref|NP_248257.1| - 3 7.1 7.6 47 3.3 0.7 2.1 1 1 1 2 2 2 0 zinc-ribbon domain NurA PF09376.5 gi|15669448|ref|NP_248258.1| - 1.8e-39 135.7 6.2 2.2e-39 135.4 4.3 1.1 1 0 0 1 1 1 1 NurA domain tRNA-synt_1g PF09334.6 gi|15669449|ref|NP_248259.1| - 6.9e-155 515.5 0.4 9.2e-155 515.1 0.3 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.15 gi|15669449|ref|NP_248259.1| - 1.1e-32 111.6 0.8 2.1e-32 110.8 0.5 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.17 gi|15669449|ref|NP_248259.1| - 8.9e-29 99.9 5.2 1.6e-10 39.6 0.4 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 gi|15669449|ref|NP_248259.1| - 9.7e-15 54.4 0.0 1.7e-07 30.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.8 gi|15669449|ref|NP_248259.1| - 1e-07 31.8 1.2 1e-07 31.8 0.8 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1d PF00750.14 gi|15669449|ref|NP_248259.1| - 0.0016 17.2 1.2 0.43 9.3 0.0 2.6 1 1 1 2 2 2 2 tRNA synthetases class I (R) tRNA-synt_1f PF01921.13 gi|15669449|ref|NP_248259.1| - 0.011 14.4 0.4 0.2 10.3 0.0 2.6 3 0 0 3 3 3 0 tRNA synthetases class I (K) DZR PF12773.2 gi|15669449|ref|NP_248259.1| - 0.013 15.3 7.4 0.03 14.1 5.1 1.7 1 0 0 1 1 1 0 Double zinc ribbon UPF0547 PF10571.4 gi|15669449|ref|NP_248259.1| - 0.049 13.3 1.4 0.17 11.5 1.0 1.9 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 ILVD_EDD PF00920.16 gi|15669449|ref|NP_248259.1| - 0.054 11.9 0.0 0.091 11.1 0.0 1.2 1 0 0 1 1 1 0 Dehydratase family Endostatin PF06482.6 gi|15669449|ref|NP_248259.1| - 0.17 11.2 0.2 0.29 10.5 0.1 1.2 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin zinc-ribbons_6 PF07191.7 gi|15669449|ref|NP_248259.1| - 1.1 9.1 4.6 2.6 7.8 3.2 1.7 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.1 gi|15669449|ref|NP_248259.1| - 3.8 7.1 14.3 0.14 11.7 3.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DUF1272 PF06906.6 gi|15669449|ref|NP_248259.1| - 4.6 7.1 7.6 2.6 7.9 1.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) AIRS_C PF02769.17 gi|15669450|ref|NP_248260.1| - 1.2e-59 200.7 1.8 4.2e-32 111.2 0.1 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|15669450|ref|NP_248260.1| - 7e-48 160.8 0.9 2.9e-26 91.5 0.1 2.5 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain NDK PF00334.14 gi|15669451|ref|NP_248261.1| - 4.1e-60 201.4 0.9 4.5e-60 201.3 0.6 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DNA_pol3_a_NII PF11490.3 gi|15669451|ref|NP_248261.1| - 0.019 14.5 0.9 0.019 14.5 0.6 1.5 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus II Toprim_3 PF13362.1 gi|15669451|ref|NP_248261.1| - 0.083 13.1 0.1 0.51 10.6 0.0 2.1 2 0 0 2 2 2 0 Toprim domain DUF3236 PF11576.3 gi|15669451|ref|NP_248261.1| - 0.087 12.2 0.3 0.86 8.9 0.0 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3236) Peripla_BP_6 PF13458.1 gi|15669452|ref|NP_248262.1| - 3.2e-36 125.3 0.0 4e-36 125.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.23 gi|15669452|ref|NP_248262.1| - 5e-29 101.1 0.0 6.3e-29 100.8 0.0 1.0 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.1 gi|15669452|ref|NP_248262.1| - 1.4e-07 30.5 0.2 3.1e-07 29.4 0.1 1.6 1 1 0 1 1 1 1 Periplasmic binding protein domain LppC PF04348.8 gi|15669452|ref|NP_248262.1| - 0.016 13.7 0.0 0.026 13.0 0.0 1.4 1 0 0 1 1 1 0 LppC putative lipoprotein ABC_tran PF00005.22 gi|15669453|ref|NP_248263.1| - 1.8e-32 112.4 0.0 2.4e-32 112.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669453|ref|NP_248263.1| - 5.9e-12 46.1 0.6 4.4e-10 40.0 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|15669453|ref|NP_248263.1| - 7.6e-08 31.7 0.1 1.9e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|15669453|ref|NP_248263.1| - 2.5e-07 31.2 2.1 4.2e-07 30.5 1.4 1.5 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|15669453|ref|NP_248263.1| - 6.2e-06 25.5 0.5 5.3e-05 22.5 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|15669453|ref|NP_248263.1| - 0.00012 21.2 1.3 0.0003 19.9 0.2 2.0 2 0 0 2 2 2 1 AAA ATPase domain Arch_ATPase PF01637.13 gi|15669453|ref|NP_248263.1| - 0.00014 21.6 0.1 0.00019 21.2 0.0 1.3 1 0 0 1 1 1 1 Archaeal ATPase MMR_HSR1 PF01926.18 gi|15669453|ref|NP_248263.1| - 0.00022 21.1 0.2 0.00054 19.9 0.2 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF258 PF03193.11 gi|15669453|ref|NP_248263.1| - 0.00034 19.8 0.0 0.00056 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 T2SE PF00437.15 gi|15669453|ref|NP_248263.1| - 0.0028 16.6 0.2 0.0051 15.7 0.0 1.5 2 0 0 2 2 1 1 Type II/IV secretion system protein AAA_10 PF12846.2 gi|15669453|ref|NP_248263.1| - 0.0028 17.1 0.0 0.0079 15.6 0.0 1.7 2 0 0 2 2 2 1 AAA-like domain AAA_16 PF13191.1 gi|15669453|ref|NP_248263.1| - 0.003 17.5 0.0 0.0068 16.4 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_13 PF13166.1 gi|15669453|ref|NP_248263.1| - 0.0038 15.7 0.0 0.005 15.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain MobB PF03205.9 gi|15669453|ref|NP_248263.1| - 0.0048 16.6 0.0 0.0093 15.6 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.1 gi|15669453|ref|NP_248263.1| - 0.0063 16.4 0.1 0.019 14.9 0.0 1.8 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|15669453|ref|NP_248263.1| - 0.0088 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_5 PF07728.9 gi|15669453|ref|NP_248263.1| - 0.0088 15.7 0.0 0.014 15.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ABC_ATPase PF09818.4 gi|15669453|ref|NP_248263.1| - 0.01 14.4 0.2 0.016 13.7 0.1 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class DUF2813 PF11398.3 gi|15669453|ref|NP_248263.1| - 0.01 14.9 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_30 PF13604.1 gi|15669453|ref|NP_248263.1| - 0.016 14.7 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|15669453|ref|NP_248263.1| - 0.023 13.8 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|15669453|ref|NP_248263.1| - 0.025 13.9 0.0 0.046 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15669453|ref|NP_248263.1| - 0.03 15.1 0.2 0.075 13.8 0.1 1.7 2 1 0 2 2 1 0 AAA domain AAA_22 PF13401.1 gi|15669453|ref|NP_248263.1| - 0.038 14.1 0.0 0.081 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|15669453|ref|NP_248263.1| - 0.054 13.3 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|15669453|ref|NP_248263.1| - 0.062 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein FtsK_SpoIIIE PF01580.13 gi|15669453|ref|NP_248263.1| - 0.083 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family cobW PF02492.14 gi|15669453|ref|NP_248263.1| - 0.1 12.0 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.17 gi|15669453|ref|NP_248263.1| - 0.11 12.6 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.7 gi|15669453|ref|NP_248263.1| - 0.13 11.9 0.0 0.22 11.1 0.0 1.6 1 1 0 1 1 1 0 NACHT domain MutS_V PF00488.16 gi|15669453|ref|NP_248263.1| - 0.15 11.4 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 MutS domain V BCA_ABC_TP_C PF12399.3 gi|15669453|ref|NP_248263.1| - 0.2 11.3 0.6 2.2 8.0 0.0 2.3 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter ABC_tran PF00005.22 gi|15669454|ref|NP_248264.1| - 5.8e-18 65.5 0.0 8.2e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669454|ref|NP_248264.1| - 3.8e-06 27.0 0.0 5e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|15669454|ref|NP_248264.1| - 0.0052 16.6 0.1 0.084 12.8 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TAFII28 PF04719.9 gi|15669454|ref|NP_248264.1| - 0.028 14.2 0.3 4.9 7.0 0.0 2.3 1 1 1 2 2 2 0 hTAFII28-like protein conserved region BPD_transp_2 PF02653.11 gi|15669455|ref|NP_248265.1| - 2.4e-50 171.0 41.7 2.9e-50 170.7 28.9 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component CytB6-F_Fe-S PF08802.5 gi|15669455|ref|NP_248265.1| - 1.5 8.9 0.0 1.5 8.9 0.0 3.2 4 0 0 4 4 4 0 Cytochrome B6-F complex Fe-S subunit BPD_transp_2 PF02653.11 gi|15669456|ref|NP_248266.1| - 1.3e-66 224.3 38.3 2.6e-66 223.3 26.6 1.5 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component Aconitase_C PF00694.14 gi|15669457|ref|NP_248267.1| - 3.9e-23 81.9 0.1 1.4e-22 80.1 0.1 1.8 1 1 1 2 2 2 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|15669457|ref|NP_248267.1| - 1.5e-09 37.5 0.2 4e-08 32.9 0.2 2.0 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus DUF3006 PF11213.3 gi|15669457|ref|NP_248267.1| - 0.0065 16.1 0.1 4.2 7.1 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF3006) Antitoxin-MazE PF04014.13 gi|15669457|ref|NP_248267.1| - 0.7 9.6 2.8 0.58 9.9 0.6 1.9 2 0 0 2 2 2 0 Antidote-toxin recognition MazE PTPS PF01242.14 gi|15669458|ref|NP_248268.1| - 3e-26 91.5 0.0 3.8e-26 91.1 0.0 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF43 PF01861.11 gi|15669459|ref|NP_248269.1| - 1.2e-124 414.1 1.1 1.5e-124 413.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF43 Methyltransf_31 PF13847.1 gi|15669459|ref|NP_248269.1| - 1.1e-07 31.5 0.1 3.8e-07 29.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Spermine_synth PF01564.12 gi|15669459|ref|NP_248269.1| - 0.00044 19.2 0.0 0.00087 18.2 0.0 1.5 1 0 0 1 1 1 1 Spermine/spermidine synthase GidB PF02527.10 gi|15669459|ref|NP_248269.1| - 0.002 17.2 0.1 0.0038 16.3 0.1 1.4 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MTS PF05175.9 gi|15669459|ref|NP_248269.1| - 0.022 14.1 0.0 0.063 12.6 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|15669459|ref|NP_248269.1| - 0.048 13.7 0.0 0.063 13.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669459|ref|NP_248269.1| - 0.049 13.0 0.0 0.078 12.3 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 RrnaAD PF00398.15 gi|15669459|ref|NP_248269.1| - 0.054 12.5 0.2 0.26 10.2 0.0 2.0 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase DUF4443 PF14544.1 gi|15669459|ref|NP_248269.1| - 0.063 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4443) TP_methylase PF00590.15 gi|15669460|ref|NP_248270.1| - 4e-17 62.6 0.0 4.9e-17 62.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Na_H_Exchanger PF00999.16 gi|15669461|ref|NP_248271.1| - 2.1e-70 237.1 51.0 2.4e-70 236.9 35.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family ILVD_EDD PF00920.16 gi|15669462|ref|NP_248272.1| - 3.3e-222 738.5 0.8 3.7e-222 738.3 0.6 1.0 1 0 0 1 1 1 1 Dehydratase family Aconitase_C PF00694.14 gi|15669463|ref|NP_248273.1| - 2.9e-21 75.9 0.0 4.3e-21 75.4 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|15669463|ref|NP_248273.1| - 0.00036 20.0 0.2 0.0026 17.2 0.0 2.0 1 1 1 2 2 2 1 Aconitate hydratase 2 N-terminus DUF3969 PF13108.1 gi|15669464|ref|NP_248274.1| - 0.037 13.6 0.2 0.074 12.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) Tetraspannin PF00335.15 gi|15669466|ref|NP_248276.1| - 0.013 14.7 0.0 0.016 14.4 0.0 1.2 1 0 0 1 1 1 0 Tetraspanin family PepSY_TM_2 PF13703.1 gi|15669466|ref|NP_248276.1| - 0.041 14.0 0.1 0.062 13.4 0.1 1.2 1 0 0 1 1 1 0 PepSY-associated TM helix OAD_gamma PF04277.8 gi|15669466|ref|NP_248276.1| - 0.089 13.1 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Met_asp_mut_E PF06368.6 gi|15669466|ref|NP_248276.1| - 0.17 10.0 0.4 3.4 5.7 0.3 2.0 2 0 0 2 2 2 0 Methylaspartate mutase E chain (MutE) DUF2976 PF11190.3 gi|15669466|ref|NP_248276.1| - 2.5 7.6 5.6 4.3 6.9 3.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) DUF553 PF04473.7 gi|15669468|ref|NP_248278.1| - 3.3e-41 140.1 5.7 7.8e-41 138.8 3.9 1.7 1 0 0 1 1 1 1 Transglutaminase-like domain S_layer_C PF05124.7 gi|15669468|ref|NP_248278.1| - 1.3e-06 28.2 0.1 1.3e-06 28.2 0.1 3.0 3 0 0 3 3 3 1 S-layer like family, C-terminal region Transglut_core PF01841.14 gi|15669468|ref|NP_248278.1| - 3e-06 27.4 0.0 5.3e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily TerY-C PF15616.1 gi|15669468|ref|NP_248278.1| - 0.015 15.2 0.6 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 TerY-C metal binding domain Peptidase_A24 PF01478.13 gi|15669469|ref|NP_248279.1| - 7.5e-19 67.8 24.8 9.9e-17 61.0 17.2 2.4 1 1 0 1 1 1 1 Type IV leader peptidase family Arc_PepC_II PF06847.6 gi|15669469|ref|NP_248279.1| - 6.5e-13 48.9 0.3 1.9e-12 47.4 0.2 1.9 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminus Type II T2SF PF00482.18 gi|15669474|ref|NP_248284.1| - 5.4e-23 81.2 1.7 6.5e-15 55.1 0.1 4.3 3 1 1 4 4 4 2 Type II secretion system (T2SS), protein F T2SE PF00437.15 gi|15669475|ref|NP_248285.1| - 1.3e-38 132.5 0.0 1.7e-38 132.1 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_17 PF13207.1 gi|15669475|ref|NP_248285.1| - 0.023 15.5 0.0 0.1 13.3 0.0 2.1 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|15669475|ref|NP_248285.1| - 0.058 12.9 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|15669475|ref|NP_248285.1| - 0.066 13.3 0.0 0.22 11.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|15669475|ref|NP_248285.1| - 0.091 13.0 0.0 0.24 11.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|15669475|ref|NP_248285.1| - 0.13 12.5 0.0 0.37 11.0 0.0 1.7 2 0 0 2 2 2 0 ABC transporter Zeta_toxin PF06414.7 gi|15669475|ref|NP_248285.1| - 0.14 11.2 0.0 0.21 10.6 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin MreB_Mbl PF06723.8 gi|15669476|ref|NP_248286.1| - 0.1 11.1 0.8 0.15 10.5 0.6 1.2 1 0 0 1 1 1 0 MreB/Mbl protein DUF1160 PF06648.6 gi|15669477|ref|NP_248287.1| - 0.039 13.7 4.6 0.051 13.3 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) Minor_capsid_1 PF10665.4 gi|15669477|ref|NP_248287.1| - 0.059 13.2 1.3 0.081 12.7 0.8 1.5 1 1 0 1 1 1 0 Minor capsid protein Dfp1_Him1_M PF08630.5 gi|15669479|ref|NP_248289.1| - 0.067 12.9 0.1 0.13 12.0 0.1 1.5 1 0 0 1 1 1 0 Dfp1/Him1, central region O-antigen_lig PF13425.1 gi|15669479|ref|NP_248289.1| - 0.13 12.2 4.9 3 7.8 0.3 2.4 2 0 0 2 2 2 0 O-antigen ligase like membrane protein MORN_2 PF07661.8 gi|15669480|ref|NP_248290.1| - 3.8 7.8 6.1 0.55 10.4 0.3 2.8 2 1 0 2 2 2 0 MORN repeat variant A2M_N PF01835.14 gi|15669483|ref|NP_248293.1| - 0.09 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 MG2 domain Fumerase PF05681.9 gi|15669484|ref|NP_248294.1| - 3.6e-103 344.3 0.3 4.2e-103 344.1 0.2 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) PHP PF02811.14 gi|15669485|ref|NP_248295.1| - 1.5e-15 57.4 1.1 3.3e-15 56.3 0.7 1.7 1 1 0 1 1 1 1 PHP domain RNase_P_p30 PF01876.11 gi|15669485|ref|NP_248295.1| - 0.00095 18.4 0.0 0.0019 17.4 0.0 1.5 1 1 0 1 1 1 1 RNase P subunit p30 PGA_cap PF09587.5 gi|15669485|ref|NP_248295.1| - 0.0065 15.8 0.1 0.0095 15.3 0.1 1.2 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Amidohydro_1 PF01979.15 gi|15669485|ref|NP_248295.1| - 0.057 13.0 0.1 0.19 11.3 0.1 1.8 1 1 0 1 1 1 0 Amidohydrolase family Dus PF01207.12 gi|15669485|ref|NP_248295.1| - 0.077 11.8 0.0 0.14 10.9 0.0 1.3 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) BATS PF06968.8 gi|15669486|ref|NP_248296.1| - 1.1e-23 82.9 0.0 4.4e-22 77.7 0.0 2.3 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.16 gi|15669486|ref|NP_248296.1| - 1.8e-14 54.2 0.6 3.8e-13 49.9 0.3 2.5 1 1 0 2 2 2 1 Radical SAM superfamily BioW PF03744.8 gi|15669487|ref|NP_248297.1| - 3e-100 334.5 4.2 3.3e-100 334.4 2.9 1.0 1 0 0 1 1 1 1 6-carboxyhexanoate--CoA ligase DUF162 PF02589.10 gi|15669487|ref|NP_248297.1| - 0.041 13.4 0.1 0.73 9.3 0.0 2.8 2 1 1 3 3 3 0 Uncharacterised ACR, YkgG family COG1556 Aminotran_1_2 PF00155.16 gi|15669488|ref|NP_248298.1| - 1.5e-63 214.9 0.0 1.7e-63 214.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|15669488|ref|NP_248298.1| - 5.7e-07 28.1 0.0 9.1e-07 27.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|15669488|ref|NP_248298.1| - 0.0019 16.9 0.0 0.0029 16.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.15 gi|15669488|ref|NP_248298.1| - 0.0068 14.9 0.1 0.033 12.7 0.0 1.9 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Aminotran_3 PF00202.16 gi|15669488|ref|NP_248298.1| - 0.0088 14.9 0.0 0.12 11.1 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-III Beta_elim_lyase PF01212.16 gi|15669488|ref|NP_248298.1| - 0.01 15.0 0.0 0.019 14.1 0.0 1.5 1 1 0 1 1 1 0 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|15669488|ref|NP_248298.1| - 0.011 14.7 0.3 0.091 11.7 0.2 2.0 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family SHMT PF00464.14 gi|15669488|ref|NP_248298.1| - 0.016 13.5 0.1 0.036 12.4 0.0 1.5 1 1 0 1 1 1 0 Serine hydroxymethyltransferase AAA_26 PF13500.1 gi|15669489|ref|NP_248299.1| - 1e-49 168.8 0.1 1.2e-49 168.6 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.18 gi|15669489|ref|NP_248299.1| - 2.1e-10 40.3 1.3 4.9e-10 39.1 0.9 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF1611 PF07755.6 gi|15669489|ref|NP_248299.1| - 1.4e-05 23.9 0.1 0.0011 17.7 0.1 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1611) KdpD PF02702.12 gi|15669489|ref|NP_248299.1| - 0.0038 16.3 0.3 0.016 14.3 0.0 1.9 2 0 0 2 2 2 1 Osmosensitive K+ channel His kinase sensor domain AAA_17 PF13207.1 gi|15669489|ref|NP_248299.1| - 0.0067 17.2 0.3 0.011 16.5 0.2 1.6 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|15669489|ref|NP_248299.1| - 0.0075 15.9 0.1 0.095 12.4 0.0 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_31 PF13614.1 gi|15669489|ref|NP_248299.1| - 0.0096 15.8 0.1 1.1 9.1 0.1 3.0 2 1 0 2 2 2 1 AAA domain CTP_synth_N PF06418.9 gi|15669489|ref|NP_248299.1| - 0.013 14.5 1.1 2.6 7.0 0.1 2.7 3 0 0 3 3 3 0 CTP synthase N-terminus Torsin PF06309.6 gi|15669489|ref|NP_248299.1| - 0.044 13.6 0.0 0.079 12.8 0.0 1.4 1 0 0 1 1 1 0 Torsin MipZ PF09140.6 gi|15669489|ref|NP_248299.1| - 0.048 12.7 0.0 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ ArsA_ATPase PF02374.10 gi|15669489|ref|NP_248299.1| - 0.094 11.7 2.3 5.3 5.9 0.1 2.7 3 0 0 3 3 3 0 Anion-transporting ATPase AAA_18 PF13238.1 gi|15669489|ref|NP_248299.1| - 0.18 12.1 1.7 0.48 10.7 1.2 1.8 1 1 0 1 1 1 0 AAA domain Aminotran_3 PF00202.16 gi|15669490|ref|NP_248300.1| - 2.6e-102 342.1 0.0 3e-102 341.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Arch_ATPase PF01637.13 gi|15669491|ref|NP_248301.1| - 1.6e-84 283.2 14.1 3.5e-70 236.3 3.7 3.0 3 0 0 3 3 3 2 Archaeal ATPase AAA_22 PF13401.1 gi|15669491|ref|NP_248301.1| - 5.4e-06 26.5 0.2 3.4e-05 24.0 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|15669491|ref|NP_248301.1| - 7e-06 25.9 12.9 0.0002 21.2 0.2 3.4 2 2 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15669491|ref|NP_248301.1| - 8.4e-06 25.8 0.0 2.7e-05 24.2 0.0 1.9 2 1 0 2 2 1 1 AAA ATPase domain AAA_35 PF14516.1 gi|15669491|ref|NP_248301.1| - 1.8e-05 23.5 0.0 0.019 13.5 0.0 2.5 2 0 0 2 2 2 2 AAA-like domain AAA PF00004.24 gi|15669491|ref|NP_248301.1| - 0.00035 20.7 0.0 0.013 15.7 0.0 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|15669491|ref|NP_248301.1| - 0.0078 15.6 0.2 0.22 10.8 0.0 2.7 2 1 0 3 3 3 1 AAA-like domain cobW PF02492.14 gi|15669491|ref|NP_248301.1| - 0.012 15.1 0.0 0.076 12.4 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.9 gi|15669491|ref|NP_248301.1| - 0.034 13.8 0.0 0.13 11.9 0.0 2.0 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Nit_Regul_Hom PF10126.4 gi|15669491|ref|NP_248301.1| - 0.041 13.6 0.8 0.82 9.4 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII MMR_HSR1 PF01926.18 gi|15669491|ref|NP_248301.1| - 0.055 13.4 4.0 0.043 13.7 0.8 2.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase RNA_helicase PF00910.17 gi|15669491|ref|NP_248301.1| - 0.055 13.6 0.4 1.7 8.8 0.0 3.0 2 1 1 3 3 3 0 RNA helicase KAP_NTPase PF07693.9 gi|15669491|ref|NP_248301.1| - 0.066 12.1 0.5 0.92 8.4 0.0 2.2 1 1 0 2 2 2 0 KAP family P-loop domain FTCD_C PF04961.7 gi|15669491|ref|NP_248301.1| - 0.067 12.5 0.9 0.11 11.8 0.6 1.3 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase AAA_32 PF13654.1 gi|15669491|ref|NP_248301.1| - 0.087 11.4 0.9 4.4 5.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain TK PF00265.13 gi|15669491|ref|NP_248301.1| - 0.37 10.3 3.2 1.2 8.6 0.0 3.0 3 1 1 4 4 4 0 Thymidine kinase AAA_17 PF13207.1 gi|15669491|ref|NP_248301.1| - 0.57 11.0 6.6 0.93 10.3 0.2 2.8 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|15669491|ref|NP_248301.1| - 7.4 6.8 8.4 1.9 8.8 0.2 3.1 2 2 0 2 2 2 0 AAA domain Fer4 PF00037.22 gi|15669492|ref|NP_248302.1| - 2.9e-13 48.8 15.5 2.4e-07 30.0 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15669492|ref|NP_248302.1| - 9.8e-10 38.1 7.9 4.9e-06 26.3 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15669492|ref|NP_248302.1| - 1e-09 38.0 6.2 0.00017 21.2 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669492|ref|NP_248302.1| - 2.5e-09 37.2 9.1 4.1e-09 36.5 6.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15669492|ref|NP_248302.1| - 4.5e-09 36.5 8.3 7e-09 35.9 5.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15669492|ref|NP_248302.1| - 2.9e-08 33.6 0.6 0.0035 17.3 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15669492|ref|NP_248302.1| - 5.9e-08 32.2 13.5 8.3e-06 25.4 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15669492|ref|NP_248302.1| - 1.1e-06 28.8 1.2 0.046 14.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669492|ref|NP_248302.1| - 2.5e-06 28.1 8.4 4.3e-06 27.3 5.8 1.4 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|15669492|ref|NP_248302.1| - 4.9e-06 26.4 12.3 0.0087 16.3 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|15669492|ref|NP_248302.1| - 8.6e-06 26.0 4.5 0.002 18.5 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669492|ref|NP_248302.1| - 2.5e-05 23.9 14.6 0.01 15.7 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15669492|ref|NP_248302.1| - 0.0015 19.0 4.9 0.08 13.5 1.0 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|15669492|ref|NP_248302.1| - 0.082 13.3 9.1 1.8 9.0 2.1 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|15669492|ref|NP_248302.1| - 1.7 9.3 17.4 0.13 12.8 4.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.22 gi|15669493|ref|NP_248303.1| - 1.4e-70 230.3 149.0 1.7e-07 30.5 2.9 14.9 15 0 0 15 15 15 14 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669493|ref|NP_248303.1| - 7.2e-50 167.1 123.5 6.1e-09 36.1 6.2 9.9 6 2 4 10 10 10 10 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669493|ref|NP_248303.1| - 6.1e-45 151.3 127.1 3.2e-08 33.6 6.7 10.3 4 2 9 13 13 13 13 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|15669493|ref|NP_248303.1| - 2.2e-41 138.0 151.1 7.5e-05 22.4 1.9 14.3 14 0 0 14 14 14 14 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15669493|ref|NP_248303.1| - 4.5e-39 132.0 136.4 7.2e-09 35.3 7.0 10.0 3 3 11 14 14 14 14 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669493|ref|NP_248303.1| - 1.5e-35 121.7 122.7 0.00024 21.7 0.2 14.3 9 4 6 15 15 15 14 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|15669493|ref|NP_248303.1| - 7.6e-32 108.9 130.5 7.1e-07 28.9 5.7 11.1 6 4 6 12 12 12 9 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|15669493|ref|NP_248303.1| - 2.2e-31 107.6 114.2 4.7e-06 26.5 3.2 10.2 5 3 5 10 10 10 10 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669493|ref|NP_248303.1| - 1.5e-30 103.2 131.3 9.4e-05 22.1 1.9 14.3 14 0 0 14 14 14 12 4Fe-4S binding domain Fer4_17 PF13534.1 gi|15669493|ref|NP_248303.1| - 7.6e-22 77.4 124.9 1.5e-05 25.2 3.4 12.1 5 3 5 11 11 11 10 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|15669493|ref|NP_248303.1| - 9.7e-20 69.5 169.2 0.0089 16.5 3.0 14.4 14 0 0 14 14 14 12 4Fe-4S binding domain Fer4_4 PF12800.2 gi|15669493|ref|NP_248303.1| - 9.9e-15 53.5 148.1 0.021 15.1 1.0 14.4 12 2 2 14 14 14 10 4Fe-4S binding domain Fer4_15 PF13459.1 gi|15669493|ref|NP_248303.1| - 2.8e-11 43.8 121.0 0.0074 16.8 1.3 14.5 9 4 4 13 13 13 5 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|15669493|ref|NP_248303.1| - 5e-10 39.6 141.7 0.051 14.0 1.0 14.1 4 3 9 13 13 13 9 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|15669493|ref|NP_248303.1| - 3.4e-09 36.9 132.1 0.051 13.9 0.6 14.8 13 2 0 13 13 13 8 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15669493|ref|NP_248303.1| - 0.00011 22.0 90.0 0.0059 16.4 8.5 8.6 3 3 4 7 7 7 3 4Fe-4S dicluster domain TPR_17 PF13431.1 gi|15669493|ref|NP_248303.1| - 0.1 12.8 3.1 19 5.7 0.0 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat HEPN PF05168.9 gi|15669494|ref|NP_248304.1| - 2.4e-33 114.5 0.3 3e-33 114.2 0.2 1.0 1 0 0 1 1 1 1 HEPN domain CTK3_C PF12350.3 gi|15669494|ref|NP_248304.1| - 0.034 14.1 0.7 0.13 12.2 0.2 2.0 2 0 0 2 2 2 0 CTD kinase subunit gamma CTK3 C-terminus NTP_transf_2 PF01909.18 gi|15669495|ref|NP_248305.1| - 1.4e-13 50.9 1.2 2.4e-13 50.2 0.8 1.5 1 1 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15669495|ref|NP_248305.1| - 0.003 17.6 0.0 0.0046 17.0 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase beta palm DUF1614 PF07758.6 gi|15669496|ref|NP_248306.1| - 0.0095 15.6 2.5 0.11 12.2 0.5 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1614) VanZ PF04892.7 gi|15669496|ref|NP_248306.1| - 0.06 13.3 0.3 0.073 13.0 0.2 1.3 1 0 0 1 1 1 0 VanZ like family TatC PF00902.13 gi|15669496|ref|NP_248306.1| - 0.82 9.0 5.9 0.92 8.8 4.1 1.1 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF2628 PF10947.3 gi|15669496|ref|NP_248306.1| - 1.8 8.3 4.3 2.4 7.9 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) MnhB PF04039.8 gi|15669497|ref|NP_248307.1| - 1.5e-35 121.9 22.3 2.6e-34 117.9 11.1 2.6 2 1 0 2 2 2 2 Domain related to MnhB subunit of Na+/H+ antiporter DUF2976 PF11190.3 gi|15669498|ref|NP_248308.1| - 0.19 11.2 2.0 0.22 11.0 0.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) Herpes_LMP1 PF05297.6 gi|15669498|ref|NP_248308.1| - 0.39 9.5 1.5 0.44 9.4 1.0 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Oxidored_q1 PF00361.15 gi|15669499|ref|NP_248309.1| - 3.3e-39 134.7 21.3 3.3e-39 134.7 14.8 3.3 1 1 1 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains NADHdeh_related PF10125.4 gi|15669499|ref|NP_248309.1| - 2.4e-11 43.2 15.2 2.4e-11 43.2 10.5 2.6 2 1 1 3 3 3 1 NADH dehydrogenase I, subunit N related protein Oxidored_q2 PF00420.19 gi|15669500|ref|NP_248310.1| - 7.3e-20 70.3 4.5 8.9e-20 70.0 3.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.4 gi|15669500|ref|NP_248310.1| - 0.00018 21.2 3.3 0.00018 21.2 2.3 2.0 2 0 0 2 2 2 1 Predicted membrane protein (DUF2108) DUF621 PF04789.10 gi|15669500|ref|NP_248310.1| - 1.4 7.8 6.3 3.6 6.5 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF621) DUF2107 PF09880.4 gi|15669500|ref|NP_248310.1| - 3 7.7 7.3 7.4 6.5 5.0 1.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2107) AP_endonuc_2 PF01261.19 gi|15669501|ref|NP_248311.1| - 3.5e-38 131.0 0.3 1.4e-37 129.1 0.1 1.8 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel UxuA PF03786.8 gi|15669501|ref|NP_248311.1| - 0.00054 18.6 0.1 0.00081 18.0 0.0 1.2 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2_N PF07582.7 gi|15669501|ref|NP_248311.1| - 0.004 16.6 0.0 0.01 15.3 0.0 1.7 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus DUF2392 PF10288.4 gi|15669501|ref|NP_248311.1| - 0.012 15.8 0.1 0.041 14.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2392) DUF4250 PF14056.1 gi|15669501|ref|NP_248311.1| - 0.041 13.6 2.2 1.4 8.7 0.1 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4250) HIRAN PF08797.6 gi|15669501|ref|NP_248311.1| - 0.046 13.6 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 HIRAN domain UPF0565 PF10561.4 gi|15669501|ref|NP_248311.1| - 0.051 12.4 0.0 0.088 11.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 WSN PF02206.13 gi|15669501|ref|NP_248311.1| - 0.64 9.8 2.8 21 4.9 0.1 3.4 3 1 1 4 4 4 0 Domain of unknown function Radical_SAM PF04055.16 gi|15669502|ref|NP_248312.1| - 6.8e-16 58.8 1.6 7.9e-16 58.6 0.3 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15669502|ref|NP_248312.1| - 0.013 15.5 0.0 0.035 14.1 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF521 PF04412.8 gi|15669503|ref|NP_248313.1| - 1e-162 541.2 0.0 1.2e-162 541.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) DUF1955 PF09205.5 gi|15669503|ref|NP_248313.1| - 0.042 13.3 3.5 0.14 11.6 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1955) Aconitase PF00330.15 gi|15669503|ref|NP_248313.1| - 0.055 11.9 0.5 0.078 11.4 0.3 1.1 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) CobD_Cbib PF03186.8 gi|15669504|ref|NP_248314.1| - 3.9e-92 308.4 0.0 4.7e-92 308.2 0.0 1.0 1 0 0 1 1 1 1 CobD/Cbib protein DUF3767 PF12597.3 gi|15669504|ref|NP_248314.1| - 0.0017 18.0 0.0 0.03 14.0 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3767) QueT PF06177.6 gi|15669504|ref|NP_248314.1| - 0.037 14.0 2.4 0.056 13.4 0.5 2.1 2 0 0 2 2 2 0 QueT transporter Clp1 PF06807.9 gi|15669505|ref|NP_248315.1| - 7.1e-10 38.9 0.1 0.00022 21.0 0.0 2.2 2 0 0 2 2 2 2 Pre-mRNA cleavage complex II protein Clp1 MobB PF03205.9 gi|15669505|ref|NP_248315.1| - 1.2e-07 31.5 0.0 3.3e-07 30.0 0.0 1.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|15669505|ref|NP_248315.1| - 1.7e-06 27.5 0.1 4.3e-06 26.2 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.17 gi|15669505|ref|NP_248315.1| - 0.0018 17.7 0.5 0.27 10.6 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MipZ PF09140.6 gi|15669505|ref|NP_248315.1| - 0.0026 16.9 0.0 0.0077 15.3 0.0 1.8 1 1 0 1 1 1 1 ATPase MipZ MMR_HSR1 PF01926.18 gi|15669505|ref|NP_248315.1| - 0.0091 15.9 0.7 0.032 14.1 0.5 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.18 gi|15669505|ref|NP_248315.1| - 0.013 15.2 0.1 0.23 11.2 0.0 2.2 2 0 0 2 2 2 0 Dynamin family AAA_17 PF13207.1 gi|15669505|ref|NP_248315.1| - 0.017 15.8 1.7 0.12 13.1 0.0 2.6 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.4 gi|15669505|ref|NP_248315.1| - 0.018 14.5 0.0 0.039 13.4 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation MutL PF13941.1 gi|15669505|ref|NP_248315.1| - 0.036 12.3 0.0 0.07 11.4 0.0 1.4 1 0 0 1 1 1 0 MutL protein G-alpha PF00503.15 gi|15669505|ref|NP_248315.1| - 0.042 12.5 0.0 0.085 11.5 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit APS_kinase PF01583.15 gi|15669505|ref|NP_248315.1| - 0.057 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase CoaE PF01121.15 gi|15669505|ref|NP_248315.1| - 0.058 12.7 0.0 0.13 11.6 0.0 1.6 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA PF00004.24 gi|15669505|ref|NP_248315.1| - 0.074 13.2 0.0 0.15 12.3 0.0 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|15669505|ref|NP_248315.1| - 0.081 12.3 0.3 0.15 11.4 0.1 1.5 2 0 0 2 2 2 0 AAA-like domain GTP_EFTU PF00009.22 gi|15669505|ref|NP_248315.1| - 0.11 11.9 0.3 0.37 10.1 0.2 1.9 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.1 gi|15669505|ref|NP_248315.1| - 0.12 12.3 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Torsin PF06309.6 gi|15669505|ref|NP_248315.1| - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Torsin DUF504 PF04457.7 gi|15669506|ref|NP_248316.1| - 2.8e-20 72.2 0.3 3.6e-20 71.8 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF504) MFS_1 PF07690.11 gi|15669507|ref|NP_248317.1| - 2.9e-37 128.2 34.7 8.6e-21 74.0 8.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Lon_C PF05362.8 gi|15669508|ref|NP_248318.1| - 1.3e-12 47.4 1.7 2.9e-12 46.3 1.2 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.1 gi|15669508|ref|NP_248318.1| - 0.00029 20.3 0.2 0.0065 15.9 0.0 2.3 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase DUF4398 PF14346.1 gi|15669508|ref|NP_248318.1| - 0.00064 19.7 7.3 0.59 10.2 0.1 3.7 2 1 2 4 4 4 2 Domain of unknown function (DUF4398) SNF PF00209.13 gi|15669509|ref|NP_248319.1| - 3.6e-111 372.1 44.1 3.4e-76 256.8 16.9 2.0 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family Fcf1 PF04900.7 gi|15669510|ref|NP_248320.1| - 1.3e-14 54.0 0.4 1.8e-14 53.6 0.3 1.2 1 0 0 1 1 1 1 Fcf1 PIN PF01850.16 gi|15669510|ref|NP_248320.1| - 2.9e-08 34.0 1.4 5.5e-07 29.9 1.0 2.0 1 1 0 1 1 1 1 PIN domain PIN_4 PF13638.1 gi|15669510|ref|NP_248320.1| - 7.5e-05 22.8 3.4 0.012 15.7 0.4 1.9 1 1 1 2 2 2 2 PIN domain NAD_binding_7 PF13241.1 gi|15669510|ref|NP_248320.1| - 0.0056 16.9 0.4 0.0094 16.1 0.3 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding RNase_Zc3h12a PF11977.3 gi|15669510|ref|NP_248320.1| - 0.0089 15.8 0.2 0.011 15.5 0.1 1.3 1 1 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain THDPS_N PF14790.1 gi|15669510|ref|NP_248320.1| - 0.014 15.0 0.8 0.021 14.4 0.6 1.3 1 0 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal DUF188 PF02639.9 gi|15669510|ref|NP_248320.1| - 0.026 13.9 0.2 0.034 13.5 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 DUF4411 PF14367.1 gi|15669510|ref|NP_248320.1| - 0.088 12.5 2.5 0.64 9.7 1.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4411) Mut7-C PF01927.11 gi|15669510|ref|NP_248320.1| - 0.14 12.1 0.1 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Mut7-C RNAse domain Piwi PF02171.12 gi|15669511|ref|NP_248321.1| - 3.4e-56 190.4 0.1 1e-55 188.8 0.0 1.9 2 0 0 2 2 2 1 Piwi domain Bromodomain PF00439.20 gi|15669511|ref|NP_248321.1| - 0.04 13.8 9.0 1.4 8.9 0.1 4.1 4 0 0 4 4 4 0 Bromodomain AAA_23 PF13476.1 gi|15669512|ref|NP_248322.1| - 4.8e-27 95.6 19.4 4.8e-27 95.6 13.5 9.1 1 1 4 6 6 2 1 AAA domain SMC_N PF02463.14 gi|15669512|ref|NP_248322.1| - 4.1e-15 55.6 41.0 1.3e-10 40.9 1.2 3.4 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain Rad50_zn_hook PF04423.9 gi|15669512|ref|NP_248322.1| - 3e-13 49.0 6.7 3e-13 49.0 4.7 13.4 13 3 2 15 15 14 1 Rad50 zinc hook motif AAA_13 PF13166.1 gi|15669512|ref|NP_248322.1| - 8.7e-09 34.4 145.1 2.5e-06 26.2 14.9 5.9 2 1 5 7 7 7 6 AAA domain SbcCD_C PF13558.1 gi|15669512|ref|NP_248322.1| - 3.7e-08 33.1 0.0 8.9e-08 31.9 0.0 1.6 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.1 gi|15669512|ref|NP_248322.1| - 2.3e-07 30.2 0.0 4.3e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain IncA PF04156.9 gi|15669512|ref|NP_248322.1| - 8.4e-06 25.5 116.8 0.0011 18.6 6.4 7.0 2 1 4 6 6 6 2 IncA protein AAA_27 PF13514.1 gi|15669512|ref|NP_248322.1| - 0.00011 20.0 94.2 0.049 11.3 18.3 7.0 4 2 2 7 7 7 5 AAA domain NPV_P10 PF05531.7 gi|15669512|ref|NP_248322.1| - 0.0016 18.6 64.9 1.4 9.2 0.4 11.3 4 3 6 11 11 10 3 Nucleopolyhedrovirus P10 protein AAA_21 PF13304.1 gi|15669512|ref|NP_248322.1| - 0.0019 18.2 15.6 0.0019 18.2 10.8 5.7 1 1 2 3 3 1 1 AAA domain Reo_sigmaC PF04582.7 gi|15669512|ref|NP_248322.1| - 0.013 14.7 15.5 0.16 11.0 0.2 5.0 3 3 1 5 5 5 0 Reovirus sigma C capsid protein AAA_16 PF13191.1 gi|15669512|ref|NP_248322.1| - 0.023 14.6 0.0 0.19 11.6 0.0 2.6 1 0 0 1 1 1 0 AAA ATPase domain BLOC1_2 PF10046.4 gi|15669512|ref|NP_248322.1| - 0.04 14.0 127.0 0.016 15.2 3.2 13.5 3 2 12 15 15 15 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FliD_N PF02465.13 gi|15669512|ref|NP_248322.1| - 0.17 12.2 51.2 0.28 11.5 0.6 9.5 5 2 4 9 9 9 0 Flagellar hook-associated protein 2 N-terminus DUF2968 PF11180.3 gi|15669512|ref|NP_248322.1| - 0.27 10.5 40.5 0.061 12.6 0.9 5.7 5 1 1 6 6 6 0 Protein of unknown function (DUF2968) PilJ PF13675.1 gi|15669512|ref|NP_248322.1| - 0.28 11.5 20.6 0.86 9.9 0.0 6.8 5 2 2 7 7 7 0 Type IV pili methyl-accepting chemotaxis transducer N-term zf-AD PF07776.10 gi|15669512|ref|NP_248322.1| - 0.32 11.0 5.0 0.24 11.4 0.4 3.2 3 0 0 3 3 2 0 Zinc-finger associated domain (zf-AD) FtsK_SpoIIIE PF01580.13 gi|15669512|ref|NP_248322.1| - 0.48 9.8 2.3 11 5.3 0.0 3.5 3 1 0 3 3 3 0 FtsK/SpoIIIE family WXG100 PF06013.7 gi|15669512|ref|NP_248322.1| - 0.82 9.7 21.3 2 8.4 0.3 8.5 10 2 1 11 11 10 0 Proteins of 100 residues with WXG MCPsignal PF00015.16 gi|15669512|ref|NP_248322.1| - 1.1 8.6 29.3 5.9 6.3 0.6 6.7 3 1 1 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF3584 PF12128.3 gi|15669512|ref|NP_248322.1| - 4.4 4.4 96.8 0.27 8.5 12.0 3.4 1 1 1 3 3 3 0 Protein of unknown function (DUF3584) Metallophos PF00149.23 gi|15669513|ref|NP_248323.1| - 9e-21 74.1 1.4 1.9e-20 73.1 0.9 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|15669513|ref|NP_248323.1| - 4.6e-13 49.2 0.0 7.4e-13 48.6 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain MobB PF03205.9 gi|15669514|ref|NP_248324.1| - 5.1e-32 110.4 2.9 7.5e-32 109.9 2.0 1.2 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B FeS PF04060.8 gi|15669514|ref|NP_248324.1| - 7.2e-09 35.0 0.6 1.3e-08 34.2 0.4 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster cobW PF02492.14 gi|15669514|ref|NP_248324.1| - 7.1e-06 25.5 1.8 8.5e-06 25.3 0.2 1.7 1 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.18 gi|15669514|ref|NP_248324.1| - 0.0004 20.3 0.7 0.00076 19.4 0.5 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase Miro PF08477.8 gi|15669514|ref|NP_248324.1| - 0.0006 20.3 0.7 0.0012 19.3 0.5 1.7 1 1 0 1 1 1 1 Miro-like protein AAA_14 PF13173.1 gi|15669514|ref|NP_248324.1| - 0.0011 18.8 0.9 0.0017 18.2 0.7 1.6 1 1 0 1 1 1 1 AAA domain GTP_EFTU PF00009.22 gi|15669514|ref|NP_248324.1| - 0.0022 17.4 2.9 0.0024 17.3 0.8 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Arch_ATPase PF01637.13 gi|15669514|ref|NP_248324.1| - 0.032 13.9 0.2 0.045 13.4 0.1 1.4 1 0 0 1 1 1 0 Archaeal ATPase ABC_tran PF00005.22 gi|15669514|ref|NP_248324.1| - 0.038 14.2 0.0 0.047 13.9 0.0 1.2 1 0 0 1 1 1 0 ABC transporter Glyco_hydro_20b PF02838.10 gi|15669514|ref|NP_248324.1| - 0.095 13.2 0.3 0.27 11.7 0.2 1.7 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 AAA_16 PF13191.1 gi|15669514|ref|NP_248324.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain Viral_helicase1 PF01443.13 gi|15669514|ref|NP_248324.1| - 0.11 11.9 0.1 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase vATP-synt_E PF01991.13 gi|15669514|ref|NP_248324.1| - 0.12 11.6 2.1 1.2 8.3 0.1 2.1 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit HTH_5 PF01022.15 gi|15669515|ref|NP_248325.1| - 3.5e-22 77.8 0.1 5.4e-22 77.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|15669515|ref|NP_248325.1| - 8.2e-17 60.7 0.0 1e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|15669515|ref|NP_248325.1| - 6.5e-06 25.7 0.0 9.6e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|15669515|ref|NP_248325.1| - 9.3e-06 24.9 0.2 1.5e-05 24.2 0.0 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|15669515|ref|NP_248325.1| - 0.00011 22.1 0.0 0.00015 21.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|15669515|ref|NP_248325.1| - 0.00067 19.3 0.0 0.00089 18.9 0.0 1.1 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.11 gi|15669515|ref|NP_248325.1| - 0.0011 19.0 0.0 0.0013 18.7 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor TFIIE_alpha PF02002.12 gi|15669515|ref|NP_248325.1| - 0.0032 16.9 0.1 0.0047 16.4 0.0 1.3 1 1 0 1 1 1 1 TFIIE alpha subunit DUF2250 PF10007.4 gi|15669515|ref|NP_248325.1| - 0.0049 16.7 0.0 0.0071 16.2 0.0 1.3 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.1 gi|15669515|ref|NP_248325.1| - 0.026 14.0 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Rrf2 PF02082.15 gi|15669515|ref|NP_248325.1| - 0.03 14.4 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_DeoR PF08220.7 gi|15669515|ref|NP_248325.1| - 0.031 13.8 0.1 0.07 12.6 0.0 1.6 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain Cdc6_C PF09079.6 gi|15669515|ref|NP_248325.1| - 0.042 13.5 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal MarR_2 PF12802.2 gi|15669515|ref|NP_248325.1| - 0.072 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_23 PF13384.1 gi|15669515|ref|NP_248325.1| - 0.12 12.0 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_IclR PF09339.5 gi|15669515|ref|NP_248325.1| - 0.13 11.8 0.0 0.67 9.5 0.0 1.9 1 1 1 2 2 2 0 IclR helix-turn-helix domain TGS PF02824.16 gi|15669516|ref|NP_248326.1| - 1.5e-24 85.5 0.0 3.1e-24 84.5 0.0 1.6 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.18 gi|15669516|ref|NP_248326.1| - 7.5e-20 71.0 0.3 1.7e-19 69.8 0.1 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15669516|ref|NP_248326.1| - 4.2e-14 52.1 0.7 2.5e-11 43.0 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B cobW PF02492.14 gi|15669516|ref|NP_248326.1| - 0.00033 20.1 1.0 0.36 10.2 0.1 2.6 2 1 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.22 gi|15669516|ref|NP_248326.1| - 0.0005 19.5 1.0 0.041 13.3 0.0 3.2 2 1 1 3 3 3 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.18 gi|15669516|ref|NP_248326.1| - 0.0035 17.1 0.2 1.3 8.8 0.1 2.4 1 1 1 2 2 2 1 Dynamin family DUF258 PF03193.11 gi|15669516|ref|NP_248326.1| - 0.01 15.0 0.2 0.037 13.2 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF258 MobB PF03205.9 gi|15669516|ref|NP_248326.1| - 0.02 14.5 0.2 0.14 11.8 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATP_bind_1 PF03029.12 gi|15669516|ref|NP_248326.1| - 0.026 14.0 0.1 1.9 7.9 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Lip_prot_lig_C PF10437.4 gi|15669516|ref|NP_248326.1| - 0.03 13.9 0.3 0.16 11.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus CTP_transf_1 PF01148.15 gi|15669516|ref|NP_248326.1| - 0.041 13.5 0.6 0.057 13.0 0.4 1.2 1 0 0 1 1 1 0 Cytidylyltransferase family ArgK PF03308.11 gi|15669516|ref|NP_248326.1| - 0.042 12.6 0.1 0.12 11.1 0.0 1.8 2 0 0 2 2 2 0 ArgK protein Arf PF00025.16 gi|15669516|ref|NP_248326.1| - 0.06 12.5 0.2 3.8 6.7 0.0 2.4 2 0 0 2 2 2 0 ADP-ribosylation factor family SRPRB PF09439.5 gi|15669516|ref|NP_248326.1| - 0.066 12.4 1.3 0.25 10.5 0.0 2.2 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit AAA_28 PF13521.1 gi|15669516|ref|NP_248326.1| - 0.16 11.9 0.2 0.45 10.4 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|15669516|ref|NP_248326.1| - 0.23 11.7 1.9 2.3 8.5 0.0 2.7 2 1 0 2 2 2 0 AAA domain TaqI_C PF12950.2 gi|15669518|ref|NP_248329.1| - 3.3e-05 23.6 0.5 0.00011 21.9 0.2 1.9 1 1 0 2 2 2 1 TaqI-like C-terminal specificity domain Peptidase_M24 PF00557.19 gi|15669519|ref|NP_248330.1| - 3.6e-44 150.8 0.0 4.4e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 PgpA PF04608.8 gi|15669520|ref|NP_248331.1| - 1.8e-18 66.6 0.0 2.1e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A Cation_ATPase_N PF00690.21 gi|15669520|ref|NP_248331.1| - 0.0037 16.7 0.0 0.0056 16.1 0.0 1.2 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Acylphosphatase PF00708.13 gi|15669521|ref|NP_248332.1| - 1.4e-05 25.0 0.0 2.8e-05 24.1 0.0 1.5 1 1 0 1 1 1 1 Acylphosphatase RuvA_N PF01330.16 gi|15669521|ref|NP_248332.1| - 0.0076 16.0 0.0 0.02 14.6 0.0 1.7 1 0 0 1 1 1 1 RuvA N terminal domain Mnd1 PF03962.10 gi|15669521|ref|NP_248332.1| - 0.0083 15.8 0.6 0.01 15.5 0.4 1.1 1 0 0 1 1 1 1 Mnd1 family Snf7 PF03357.16 gi|15669521|ref|NP_248332.1| - 0.021 14.2 0.2 0.03 13.7 0.1 1.3 1 0 0 1 1 1 0 Snf7 Med28 PF11594.3 gi|15669521|ref|NP_248332.1| - 0.026 14.7 2.5 0.04 14.1 1.7 1.6 1 1 0 1 1 1 0 Mediator complex subunit 28 RNA_pol_Rpb4 PF03874.11 gi|15669521|ref|NP_248332.1| - 0.039 13.9 2.0 0.45 10.5 0.5 2.1 1 1 1 2 2 2 0 RNA polymerase Rpb4 LOH1CR12 PF10158.4 gi|15669521|ref|NP_248332.1| - 0.042 13.6 0.9 0.067 12.9 0.3 1.7 2 0 0 2 2 2 0 Tumour suppressor protein Syntaxin-6_N PF09177.6 gi|15669521|ref|NP_248332.1| - 0.061 13.7 0.8 0.14 12.5 0.5 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Peptidase_S74 PF13884.1 gi|15669521|ref|NP_248332.1| - 0.063 13.4 0.4 1.2 9.3 0.1 2.6 1 1 1 2 2 2 0 Chaperone of endosialidase RasGAP PF00616.14 gi|15669521|ref|NP_248332.1| - 0.075 12.6 2.5 0.12 12.0 1.7 1.4 1 1 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase DUF2316 PF10078.4 gi|15669521|ref|NP_248332.1| - 0.079 12.9 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2316) RPW8 PF05659.6 gi|15669521|ref|NP_248332.1| - 0.084 12.4 0.8 1.6 8.2 0.2 2.2 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF2087 PF09860.4 gi|15669521|ref|NP_248332.1| - 0.13 12.0 1.6 0.93 9.2 0.3 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2087) XhlA PF10779.4 gi|15669521|ref|NP_248332.1| - 0.24 11.3 3.7 0.52 10.2 2.6 1.6 1 0 0 1 1 1 0 Haemolysin XhlA DUF4083 PF13314.1 gi|15669521|ref|NP_248332.1| - 0.36 10.6 2.9 0.28 11.0 0.8 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DASH_Dad1 PF08649.5 gi|15669521|ref|NP_248332.1| - 0.5 10.1 3.1 1.3 8.7 0.6 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad1 DUF2972 PF11186.3 gi|15669521|ref|NP_248332.1| - 0.85 9.4 9.0 0.88 9.4 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2972) MMR_HSR1_C PF08438.5 gi|15669522|ref|NP_248333.1| - 3.7e-37 126.8 0.4 8.8e-37 125.6 0.3 1.7 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|15669522|ref|NP_248333.1| - 5e-23 81.2 0.0 5.9e-22 77.8 0.0 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 gi|15669522|ref|NP_248333.1| - 7.2e-16 57.7 0.0 1.3e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|15669522|ref|NP_248333.1| - 2.2e-12 46.4 0.3 1.3e-09 37.4 0.0 2.7 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|15669522|ref|NP_248333.1| - 2.7e-05 23.6 0.1 0.1 11.9 0.1 3.2 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain ArgK PF03308.11 gi|15669522|ref|NP_248333.1| - 0.0078 15.0 0.2 0.15 10.8 0.0 2.4 2 0 0 2 2 2 1 ArgK protein Miro PF08477.8 gi|15669522|ref|NP_248333.1| - 0.012 16.0 0.0 0.18 12.3 0.0 2.7 2 2 0 2 2 2 0 Miro-like protein Dynamin_N PF00350.18 gi|15669522|ref|NP_248333.1| - 0.016 14.9 0.8 1.2 8.8 0.0 3.5 3 1 1 4 4 4 0 Dynamin family YchF-GTPase_C PF06071.8 gi|15669522|ref|NP_248333.1| - 0.05 13.4 0.1 0.73 9.6 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF933) DUF4423 PF14394.1 gi|15669522|ref|NP_248333.1| - 0.058 12.9 1.3 0.91 9.0 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) AAA_17 PF13207.1 gi|15669522|ref|NP_248333.1| - 0.073 13.8 4.4 2 9.2 0.0 3.0 1 1 1 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|15669522|ref|NP_248333.1| - 0.42 10.9 0.0 0.42 10.9 0.0 3.0 2 1 0 2 2 2 0 AAA domain DUF3336 PF11815.3 gi|15669523|ref|NP_248334.1| - 0.11 12.0 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3336) DUF2765 PF10963.3 gi|15669523|ref|NP_248334.1| - 0.12 12.3 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2765) EamA PF00892.15 gi|15669524|ref|NP_248335.1| - 4.8e-22 78.3 19.7 6.1e-22 77.9 13.6 1.1 1 0 0 1 1 1 1 EamA-like transporter family EmrE PF13536.1 gi|15669524|ref|NP_248335.1| - 6.8e-06 26.2 21.1 7.1e-06 26.1 9.0 2.1 1 1 1 2 2 2 1 Multidrug resistance efflux transporter UPF0546 PF10639.4 gi|15669524|ref|NP_248335.1| - 0.00056 19.7 8.1 0.0012 18.6 5.6 1.7 1 1 0 1 1 1 1 Uncharacterised protein family UPF0546 UAA PF08449.6 gi|15669524|ref|NP_248335.1| - 0.0059 15.5 10.5 0.0067 15.3 7.1 1.3 1 1 0 1 1 1 1 UAA transporter family Multi_Drug_Res PF00893.14 gi|15669524|ref|NP_248335.1| - 0.018 15.4 11.8 0.018 15.4 8.2 2.5 1 1 0 2 2 2 0 Small Multidrug Resistance protein Sugar_transport PF06800.7 gi|15669524|ref|NP_248335.1| - 0.097 11.7 16.6 0.12 11.4 11.5 1.1 1 0 0 1 1 1 0 Sugar transport protein TPT PF03151.11 gi|15669524|ref|NP_248335.1| - 0.31 10.6 14.7 3.4 7.3 10.2 2.5 1 1 0 1 1 1 0 Triose-phosphate Transporter family Nuc_sug_transp PF04142.10 gi|15669524|ref|NP_248335.1| - 0.5 9.4 11.2 0.048 12.7 4.0 1.8 1 1 1 2 2 2 0 Nucleotide-sugar transporter Mg_trans_NIPA PF05653.9 gi|15669524|ref|NP_248335.1| - 5 6.0 19.1 0.17 10.7 6.6 2.1 1 1 1 2 2 2 0 Magnesium transporter NIPA CoA_binding_3 PF13727.1 gi|15669524|ref|NP_248335.1| - 5.5 6.7 7.2 1.6 8.5 2.7 1.7 1 1 1 2 2 2 0 CoA-binding domain DUF2938 PF11158.3 gi|15669524|ref|NP_248335.1| - 6.3 6.1 9.6 0.32 10.3 0.6 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2938) MerC PF03203.9 gi|15669524|ref|NP_248335.1| - 8.9 6.7 12.3 30 5.0 2.9 2.1 1 1 1 2 2 2 0 MerC mercury resistance protein NTP_transferase PF00483.18 gi|15669525|ref|NP_248336.1| - 1.6e-30 106.1 0.1 2.8e-30 105.4 0.1 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|15669525|ref|NP_248336.1| - 2.3e-10 40.7 0.0 2.9e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.21 gi|15669525|ref|NP_248336.1| - 4.5e-07 29.7 0.0 6.8e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF3782 PF12644.2 gi|15669525|ref|NP_248336.1| - 0.0098 15.6 0.1 0.021 14.6 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3782) IspD PF01128.14 gi|15669525|ref|NP_248336.1| - 0.031 13.7 0.0 0.057 12.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SIS_2 PF13580.1 gi|15669526|ref|NP_248337.1| - 4.8e-22 78.1 0.1 6.4e-22 77.7 0.1 1.2 1 0 0 1 1 1 1 SIS domain SIS PF01380.17 gi|15669526|ref|NP_248337.1| - 0.00036 20.1 0.0 0.00052 19.6 0.0 1.3 1 0 0 1 1 1 1 SIS domain PfkB PF00294.19 gi|15669527|ref|NP_248338.1| - 3.7e-07 29.5 0.0 4.3e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|15669527|ref|NP_248338.1| - 0.0004 19.6 0.0 0.00046 19.4 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.12 gi|15669528|ref|NP_248339.1| - 5.1e-06 25.9 0.0 6.7e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase HMD PF03201.11 gi|15669529|ref|NP_248340.1| - 1.1e-40 137.5 2.6 2e-40 136.6 1.8 1.5 1 0 0 1 1 1 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase NAD_binding_2 PF03446.10 gi|15669529|ref|NP_248340.1| - 0.024 14.4 0.9 0.057 13.2 0.0 2.0 2 1 1 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|15669529|ref|NP_248340.1| - 0.035 13.7 3.4 0.17 11.5 0.0 2.9 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GTP_EFTU PF00009.22 gi|15669530|ref|NP_248341.1| - 1.6e-18 66.8 0.7 1.3e-16 60.5 0.5 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|15669530|ref|NP_248341.1| - 6.2e-14 52.5 0.3 7.6e-14 52.2 0.2 1.1 1 0 0 1 1 1 1 Miro-like protein MMR_HSR1 PF01926.18 gi|15669530|ref|NP_248341.1| - 1.9e-11 43.9 0.4 2.5e-11 43.5 0.2 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.17 gi|15669530|ref|NP_248341.1| - 2.8e-09 36.5 0.4 3.6e-09 36.2 0.3 1.2 1 0 0 1 1 1 1 Ras family Arf PF00025.16 gi|15669530|ref|NP_248341.1| - 1.1e-08 34.5 0.5 2.6e-08 33.2 0.3 1.6 1 1 0 1 1 1 1 ADP-ribosylation factor family FeoB_N PF02421.13 gi|15669530|ref|NP_248341.1| - 7.8e-07 28.4 0.5 5.1e-06 25.8 0.3 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B MobB PF03205.9 gi|15669530|ref|NP_248341.1| - 1.5e-05 24.7 0.4 3e-05 23.7 0.3 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ATP_bind_1 PF03029.12 gi|15669530|ref|NP_248341.1| - 0.00042 19.9 0.0 0.028 13.9 0.0 2.3 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.18 gi|15669530|ref|NP_248341.1| - 0.0015 18.3 0.2 0.32 10.7 0.1 2.1 1 1 1 2 2 2 1 Dynamin family SRPRB PF09439.5 gi|15669530|ref|NP_248341.1| - 0.0023 17.1 0.2 0.0031 16.7 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.4 gi|15669530|ref|NP_248341.1| - 0.0055 16.1 0.6 0.013 15.0 0.4 1.9 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation DUF258 PF03193.11 gi|15669530|ref|NP_248341.1| - 0.0059 15.8 0.2 0.013 14.6 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_28 PF13521.1 gi|15669530|ref|NP_248341.1| - 0.0074 16.2 0.0 0.0094 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|15669530|ref|NP_248341.1| - 0.012 14.4 0.4 2.1 7.0 0.1 2.6 1 1 1 2 2 2 0 ArgK protein NTPase_1 PF03266.10 gi|15669530|ref|NP_248341.1| - 0.017 14.8 0.4 0.032 13.9 0.3 1.4 1 0 0 1 1 1 0 NTPase CbiA PF01656.18 gi|15669530|ref|NP_248341.1| - 0.022 14.1 0.4 1.7 8.0 0.1 2.1 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.1 gi|15669530|ref|NP_248341.1| - 0.023 14.8 0.0 0.032 14.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|15669530|ref|NP_248341.1| - 0.025 14.7 0.1 0.036 14.2 0.0 1.6 1 1 0 1 1 1 0 RNA helicase AAA_14 PF13173.1 gi|15669530|ref|NP_248341.1| - 0.035 13.9 0.1 0.053 13.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15669530|ref|NP_248341.1| - 0.056 14.2 0.3 0.087 13.6 0.2 1.7 1 1 0 1 1 1 0 AAA domain Septin PF00735.13 gi|15669530|ref|NP_248341.1| - 0.056 12.4 0.1 0.098 11.6 0.0 1.5 2 0 0 2 2 2 0 Septin AIG1 PF04548.11 gi|15669530|ref|NP_248341.1| - 0.06 12.4 0.4 0.28 10.2 0.3 1.8 1 1 0 1 1 1 0 AIG1 family Pox_A32 PF04665.7 gi|15669530|ref|NP_248341.1| - 0.091 12.0 0.0 0.17 11.1 0.0 1.5 1 0 0 1 1 1 0 Poxvirus A32 protein Terminase_GpA PF05876.7 gi|15669530|ref|NP_248341.1| - 0.098 10.9 0.0 7.2 4.8 0.0 2.0 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) G-alpha PF00503.15 gi|15669530|ref|NP_248341.1| - 0.1 11.2 0.4 0.14 10.8 0.0 1.6 2 0 0 2 2 2 0 G-protein alpha subunit Robl_LC7 PF03259.12 gi|15669531|ref|NP_248342.1| - 6.4e-24 83.3 1.5 8.3e-24 82.9 1.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.5 gi|15669531|ref|NP_248342.1| - 0.0055 16.3 0.0 0.0063 16.1 0.0 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting DegT_DnrJ_EryC1 PF01041.12 gi|15669532|ref|NP_248343.1| - 0.18 10.7 0.0 0.26 10.2 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family C1_1 PF00130.17 gi|15669533|ref|NP_248344.1| - 0.22 11.2 5.7 1.1 9.0 0.4 2.6 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ammonium_transp PF00909.16 gi|15669534|ref|NP_248345.1| - 1.9e-111 372.4 32.0 2.1e-111 372.2 22.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.17 gi|15669535|ref|NP_248346.1| - 3.1e-40 136.7 3.2 3.5e-40 136.6 2.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Nit_Regul_Hom PF10126.4 gi|15669535|ref|NP_248346.1| - 0.065 13.0 0.4 7.2 6.4 0.0 2.3 1 1 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF1449 PF07290.6 gi|15669535|ref|NP_248346.1| - 0.13 11.5 0.1 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) TPR_1 PF00515.23 gi|15669536|ref|NP_248347.1| - 6.9e-54 177.3 38.4 1.1e-09 37.5 0.3 9.1 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15669536|ref|NP_248347.1| - 1.2e-51 168.4 26.5 1.1e-06 28.1 0.1 9.1 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15669536|ref|NP_248347.1| - 1.2e-47 159.6 0.1 2.8e-08 34.1 0.0 6.0 1 1 5 7 7 7 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|15669536|ref|NP_248347.1| - 1e-46 156.4 17.1 6e-15 54.6 0.5 5.1 4 1 1 5 5 5 5 TPR repeat TPR_12 PF13424.1 gi|15669536|ref|NP_248347.1| - 8.1e-39 131.4 22.4 2.7e-08 33.6 0.4 6.0 2 2 5 7 7 7 7 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15669536|ref|NP_248347.1| - 3e-36 123.5 21.6 5.6e-09 36.2 0.1 5.3 2 1 5 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15669536|ref|NP_248347.1| - 3.3e-36 120.3 35.5 1.5e-07 30.6 0.0 8.9 7 2 2 9 9 9 7 Tetratricopeptide repeat TPR_17 PF13431.1 gi|15669536|ref|NP_248347.1| - 2e-33 111.7 15.9 1.7e-05 24.6 0.1 8.4 9 1 0 9 9 8 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15669536|ref|NP_248347.1| - 7.8e-32 106.8 0.0 0.00072 19.9 0.0 8.6 1 1 8 9 9 9 7 Tetratricopeptide repeat Apc3 PF12895.2 gi|15669536|ref|NP_248347.1| - 1.3e-28 98.9 12.0 9.7e-10 38.4 0.7 4.0 2 2 3 5 5 5 5 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 gi|15669536|ref|NP_248347.1| - 2.9e-23 82.4 6.3 5.5e-06 25.4 0.0 4.8 1 1 4 5 5 5 4 NMDA receptor-regulated protein 1 TPR_9 PF13371.1 gi|15669536|ref|NP_248347.1| - 3.9e-23 81.0 0.0 2.9e-06 27.0 0.0 5.9 2 2 4 6 6 6 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15669536|ref|NP_248347.1| - 1.8e-19 67.9 7.6 0.0089 15.7 0.0 8.4 8 1 1 9 9 9 4 Tetratricopeptide repeat TPR_6 PF13174.1 gi|15669536|ref|NP_248347.1| - 1.7e-18 65.7 15.0 0.09 13.2 0.0 8.3 9 0 0 9 9 8 4 Tetratricopeptide repeat TPR_15 PF13429.1 gi|15669536|ref|NP_248347.1| - 8.7e-15 54.5 1.5 4.8e-07 29.1 0.0 3.3 1 1 1 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|15669536|ref|NP_248347.1| - 7.2e-13 48.2 19.6 0.028 14.2 0.0 8.0 9 0 0 9 9 8 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|15669536|ref|NP_248347.1| - 5.4e-12 45.2 2.0 0.7 9.9 0.0 7.1 7 0 0 7 7 7 3 Tetratricopeptide repeat DUF3808 PF10300.4 gi|15669536|ref|NP_248347.1| - 6.6e-09 34.8 0.3 0.0017 17.0 0.0 3.7 1 1 2 3 3 3 2 Protein of unknown function (DUF3808) DUF3856 PF12968.2 gi|15669536|ref|NP_248347.1| - 8.2e-07 28.9 0.4 7.4 6.3 0.0 5.6 2 2 2 5 5 5 0 Domain of Unknown Function (DUF3856) PPR PF01535.15 gi|15669536|ref|NP_248347.1| - 2.1e-06 27.2 14.8 5 7.3 0.1 8.3 9 0 0 9 9 8 0 PPR repeat SNAP PF14938.1 gi|15669536|ref|NP_248347.1| - 9.2e-06 25.0 0.6 0.33 10.0 0.0 4.3 3 2 0 3 3 3 1 Soluble NSF attachment protein, SNAP RPN7 PF10602.4 gi|15669536|ref|NP_248347.1| - 9.7e-06 25.0 4.0 0.0067 15.8 0.2 3.9 2 1 2 4 4 4 2 26S proteasome subunit RPN7 Coatomer_E PF04733.9 gi|15669536|ref|NP_248347.1| - 1.2e-05 24.6 0.1 0.00014 21.1 0.0 2.2 2 1 1 3 3 3 1 Coatomer epsilon subunit TPR_21 PF09976.4 gi|15669536|ref|NP_248347.1| - 1.7e-05 24.7 0.9 0.93 9.4 0.0 4.0 3 2 0 4 4 4 2 Tetratricopeptide repeat TPR_5 PF12688.2 gi|15669536|ref|NP_248347.1| - 3.3e-05 23.9 0.0 1.2 9.1 0.0 4.4 2 2 3 5 5 5 1 Tetratrico peptide repeat MIT PF04212.13 gi|15669536|ref|NP_248347.1| - 0.00034 20.4 12.4 0.013 15.3 0.3 5.9 7 2 0 7 7 5 1 MIT (microtubule interacting and transport) domain BTAD PF03704.12 gi|15669536|ref|NP_248347.1| - 0.001 19.4 0.0 4.1 7.6 0.0 3.4 2 1 1 3 3 3 1 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|15669536|ref|NP_248347.1| - 0.002 18.2 0.0 1.1 9.3 0.0 3.5 2 2 2 4 4 4 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|15669536|ref|NP_248347.1| - 0.0066 16.2 0.9 3.6 7.4 0.1 4.8 5 0 0 5 5 5 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 gi|15669536|ref|NP_248347.1| - 0.016 15.4 0.1 16 5.7 0.0 4.0 2 1 3 6 6 6 0 Alkyl sulfatase dimerisation HrpB1_HrpK PF09613.5 gi|15669536|ref|NP_248347.1| - 0.027 13.9 0.0 4 6.9 0.0 3.2 3 1 0 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) PPTA PF01239.17 gi|15669536|ref|NP_248347.1| - 0.03 13.6 3.8 0.89 9.0 0.0 4.2 4 0 0 4 4 4 0 Protein prenyltransferase alpha subunit repeat ATP13 PF12921.2 gi|15669536|ref|NP_248347.1| - 0.07 12.4 0.8 2.2 7.6 0.0 3.1 3 1 0 3 3 3 0 Mitochondrial ATPase expression FAT PF02259.18 gi|15669536|ref|NP_248347.1| - 0.075 12.0 0.0 0.34 9.8 0.0 2.1 2 1 0 2 2 2 0 FAT domain ChAPs PF09295.5 gi|15669536|ref|NP_248347.1| - 0.097 11.4 0.0 0.27 9.9 0.0 1.6 1 1 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) Gln-synt_C PF00120.19 gi|15669537|ref|NP_248348.1| - 5e-103 343.7 0.0 6.4e-103 343.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|15669537|ref|NP_248348.1| - 3.2e-30 103.5 0.0 6.3e-30 102.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain QueC PF06508.8 gi|15669538|ref|NP_248349.1| - 1.1e-71 240.4 0.1 1.2e-71 240.2 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15669538|ref|NP_248349.1| - 1.1e-06 27.4 0.0 1.7e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase ATP_bind_3 PF01171.15 gi|15669538|ref|NP_248349.1| - 3.7e-06 26.5 0.0 1.2e-05 24.8 0.0 1.8 1 1 0 1 1 1 1 PP-loop family NAD_synthase PF02540.12 gi|15669538|ref|NP_248349.1| - 4.5e-06 25.7 0.2 7.7e-06 24.9 0.0 1.6 2 0 0 2 2 2 1 NAD synthase Asn_synthase PF00733.16 gi|15669538|ref|NP_248349.1| - 6.5e-06 25.8 0.0 9.8e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.9 gi|15669538|ref|NP_248349.1| - 9e-06 25.2 0.3 5.9e-05 22.6 0.2 2.2 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Arginosuc_synth PF00764.14 gi|15669538|ref|NP_248349.1| - 0.00096 18.2 0.0 0.0015 17.6 0.0 1.3 1 0 0 1 1 1 1 Arginosuccinate synthase DeoC PF01791.4 gi|15669538|ref|NP_248349.1| - 0.041 13.1 0.1 2.2 7.4 0.0 2.1 2 0 0 2 2 2 0 DeoC/LacD family aldolase TPR_3 PF07720.7 gi|15669539|ref|NP_248350.1| - 4.3e-13 48.7 2.9 1.1e-12 47.5 2.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.12 gi|15669539|ref|NP_248350.1| - 0.0043 16.8 4.0 0.052 13.4 0.3 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TFIIA_gamma_N PF02268.11 gi|15669539|ref|NP_248350.1| - 0.005 16.4 0.1 0.015 14.8 0.1 1.8 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain TPR_1 PF00515.23 gi|15669539|ref|NP_248350.1| - 0.011 15.3 6.5 0.019 14.5 0.4 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF939_C PF11728.3 gi|15669539|ref|NP_248350.1| - 0.021 14.6 2.5 0.13 12.1 0.1 2.8 3 0 0 3 3 3 0 DUF939 C-terminal domain TPR_11 PF13414.1 gi|15669539|ref|NP_248350.1| - 0.04 13.5 1.0 0.04 13.5 0.7 2.8 2 1 1 3 3 3 0 TPR repeat DUF3023 PF11224.3 gi|15669539|ref|NP_248350.1| - 0.054 13.1 0.2 0.054 13.1 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3023) TPR_12 PF13424.1 gi|15669539|ref|NP_248350.1| - 0.07 13.0 0.1 0.64 9.9 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15669539|ref|NP_248350.1| - 1.1 9.2 11.7 0.048 13.4 1.2 3.8 3 1 0 3 3 3 0 Tetratricopeptide repeat FrhB_FdhB_C PF04432.8 gi|15669540|ref|NP_248351.1| - 9e-42 142.2 0.1 2.4e-41 140.8 0.1 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|15669540|ref|NP_248351.1| - 2.2e-21 75.4 0.1 3.7e-21 74.7 0.1 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|15669540|ref|NP_248351.1| - 6.9e-08 31.7 3.0 6.9e-08 31.7 2.0 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669540|ref|NP_248351.1| - 1.1e-06 28.2 2.2 1.1e-06 28.2 1.5 3.1 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|15669540|ref|NP_248351.1| - 2.4e-06 27.2 15.0 7.8e-05 22.3 11.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669540|ref|NP_248351.1| - 8.2e-06 25.4 3.9 8.2e-06 25.4 2.7 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15669540|ref|NP_248351.1| - 4.1e-05 23.5 11.4 0.0015 18.4 1.8 2.8 3 1 0 3 3 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|15669540|ref|NP_248351.1| - 0.00022 21.5 20.0 0.00027 21.2 11.6 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|15669540|ref|NP_248351.1| - 0.00037 20.5 2.3 0.00037 20.5 1.6 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15669540|ref|NP_248351.1| - 0.00062 19.5 0.5 0.00062 19.5 0.3 3.3 3 1 1 4 4 4 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669540|ref|NP_248351.1| - 0.0012 19.0 2.4 0.0012 19.0 1.7 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|15669540|ref|NP_248351.1| - 0.0015 18.8 0.8 0.0015 18.8 0.5 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15669540|ref|NP_248351.1| - 0.0066 16.7 0.5 0.0066 16.7 0.3 3.0 4 0 0 4 4 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669540|ref|NP_248351.1| - 0.014 16.1 2.8 0.014 16.1 1.9 3.1 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|15669540|ref|NP_248351.1| - 0.018 15.5 7.6 0.018 15.5 5.2 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|15669540|ref|NP_248351.1| - 0.05 13.9 9.1 0.12 12.8 0.6 3.1 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|15669540|ref|NP_248351.1| - 0.45 10.4 8.3 2.1 8.2 5.7 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|15669540|ref|NP_248351.1| - 0.77 10.3 12.3 0.12 12.9 2.7 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain GXGXG PF01493.14 gi|15669541|ref|NP_248352.1| - 2.5e-53 180.0 9.5 2.9e-53 179.8 6.6 1.0 1 0 0 1 1 1 1 GXGXG motif BSD PF03909.12 gi|15669541|ref|NP_248352.1| - 0.043 13.5 0.1 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 BSD domain Glu_synthase PF01645.12 gi|15669542|ref|NP_248353.1| - 4.2e-148 493.1 0.1 6e-148 492.6 0.1 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|15669542|ref|NP_248353.1| - 1.1e-14 54.0 3.1 2.3e-10 39.8 1.0 3.2 3 0 0 3 3 3 2 FMN-dependent dehydrogenase Glu_syn_central PF04898.9 gi|15669542|ref|NP_248353.1| - 1.4e-08 34.3 0.1 0.00039 19.7 0.0 2.4 2 0 0 2 2 2 2 Glutamate synthase central domain IMPDH PF00478.20 gi|15669542|ref|NP_248353.1| - 4.9e-08 32.2 3.4 3.4e-07 29.4 0.9 2.7 3 0 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain Fer4_7 PF12838.2 gi|15669542|ref|NP_248353.1| - 2.5e-06 27.7 18.1 0.0067 16.7 2.6 3.5 3 1 0 3 3 3 2 4Fe-4S dicluster domain NMO PF03060.10 gi|15669542|ref|NP_248353.1| - 3.3e-06 26.5 3.2 5.5e-06 25.7 2.2 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase Fer4_10 PF13237.1 gi|15669542|ref|NP_248353.1| - 6e-06 25.9 17.6 0.00011 21.9 9.0 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain DHO_dh PF01180.16 gi|15669542|ref|NP_248353.1| - 3.6e-05 22.8 5.9 0.00017 20.6 2.4 2.7 2 1 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4 PF00037.22 gi|15669542|ref|NP_248353.1| - 0.0001 21.7 22.5 0.00032 20.1 1.3 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|15669542|ref|NP_248353.1| - 0.0001 22.0 8.5 0.0001 22.0 5.9 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|15669542|ref|NP_248353.1| - 0.00016 21.8 10.3 0.00016 21.8 7.1 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|15669542|ref|NP_248353.1| - 0.00039 21.0 0.6 0.00039 21.0 0.4 3.3 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain His_biosynth PF00977.16 gi|15669542|ref|NP_248353.1| - 0.0013 18.0 0.2 0.0032 16.7 0.1 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_6 PF12837.2 gi|15669542|ref|NP_248353.1| - 0.002 17.9 1.5 0.002 17.9 1.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|15669542|ref|NP_248353.1| - 0.0076 16.2 15.4 0.11 12.5 8.5 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669542|ref|NP_248353.1| - 0.0086 15.9 23.6 0.017 15.0 1.4 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain PcrB PF01884.12 gi|15669542|ref|NP_248353.1| - 0.071 12.3 1.2 3.9 6.6 0.2 2.3 1 1 0 2 2 2 0 PcrB family Fer4_18 PF13746.1 gi|15669542|ref|NP_248353.1| - 2 8.8 16.6 0.86 10.0 1.6 3.3 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|15669542|ref|NP_248353.1| - 2 8.8 17.9 6.9 7.1 1.8 3.4 2 1 1 4 4 4 0 4Fe-4S dicluster domain NAD_synthase PF02540.12 gi|15669543|ref|NP_248355.1| - 3.5e-104 346.9 0.1 4.1e-104 346.7 0.1 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|15669543|ref|NP_248355.1| - 1.6e-13 49.9 0.0 1.3e-07 30.4 0.0 2.8 3 0 0 3 3 3 2 tRNA methyl transferase QueC PF06508.8 gi|15669543|ref|NP_248355.1| - 0.00057 19.2 0.0 0.0028 16.9 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|15669543|ref|NP_248355.1| - 0.00067 19.2 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.9 gi|15669543|ref|NP_248355.1| - 0.0016 17.9 0.2 0.0057 16.1 0.0 1.9 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) HTH_40 PF14493.1 gi|15669543|ref|NP_248355.1| - 0.018 15.2 0.4 0.061 13.5 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|15669543|ref|NP_248355.1| - 0.022 14.4 0.0 0.13 11.9 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain HTH_7 PF02796.10 gi|15669543|ref|NP_248355.1| - 0.026 14.3 0.0 0.092 12.6 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase ATP_bind_3 PF01171.15 gi|15669543|ref|NP_248355.1| - 0.084 12.3 0.0 0.23 10.9 0.0 1.8 2 0 0 2 2 2 0 PP-loop family PAPS_reduct PF01507.14 gi|15669543|ref|NP_248355.1| - 0.1 12.4 0.0 0.36 10.6 0.0 1.9 2 1 1 3 3 3 0 Phosphoadenosine phosphosulfate reductase family TraO PF10626.4 gi|15669544|ref|NP_248357.1| - 0.067 12.5 0.2 0.089 12.1 0.1 1.4 1 1 0 1 1 1 0 Conjugative transposon protein TraO RseC_MucC PF04246.7 gi|15669544|ref|NP_248357.1| - 7.1 6.1 5.6 51 3.4 2.5 2.4 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF505 PF04458.7 gi|15669545|ref|NP_248358.1| - 4.4e-237 787.9 38.1 5e-237 787.7 26.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HxlR PF01638.12 gi|15669545|ref|NP_248358.1| - 0.0016 18.0 1.2 0.26 10.9 0.0 4.4 4 0 0 4 4 4 1 HxlR-like helix-turn-helix AAA_assoc_C PF09821.4 gi|15669545|ref|NP_248358.1| - 0.059 13.6 3.5 1.7 8.9 0.1 3.7 3 1 1 4 4 4 0 C-terminal AAA-associated domain Rio2_N PF09202.6 gi|15669545|ref|NP_248358.1| - 0.12 12.4 2.1 0.6 10.2 0.1 3.0 3 0 0 3 3 3 0 Rio2, N-terminal Protoglobin PF11563.3 gi|15669546|ref|NP_248359.1| - 1e-11 44.7 0.6 1.3e-11 44.4 0.4 1.1 1 0 0 1 1 1 1 Protoglobin DUF445 PF04286.7 gi|15669546|ref|NP_248359.1| - 0.0022 17.5 3.6 0.0029 17.2 2.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF445) Phage_connect_1 PF05135.8 gi|15669546|ref|NP_248359.1| - 0.0073 16.4 7.4 0.084 13.0 1.9 2.2 2 0 0 2 2 2 1 Phage gp6-like head-tail connector protein DUF2357 PF09823.4 gi|15669546|ref|NP_248359.1| - 0.015 14.3 0.7 0.022 13.8 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) Ku_PK_bind PF08785.6 gi|15669546|ref|NP_248359.1| - 0.027 14.3 3.1 0.038 13.8 1.0 2.1 1 1 1 2 2 2 0 Ku C terminal domain like NAAA-beta PF15508.1 gi|15669546|ref|NP_248359.1| - 0.099 13.0 1.5 0.93 9.8 0.1 2.3 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase PolyA_pol PF01743.15 gi|15669546|ref|NP_248359.1| - 0.12 12.5 0.8 0.29 11.3 0.4 1.8 1 1 0 1 1 1 0 Poly A polymerase head domain PMC2NT PF08066.7 gi|15669546|ref|NP_248359.1| - 0.13 12.5 2.5 7.8 6.8 0.1 2.5 2 0 0 2 2 2 0 PMC2NT (NUC016) domain DUF3510 PF12022.3 gi|15669546|ref|NP_248359.1| - 0.14 12.2 3.2 0.28 11.2 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) ApoC-I PF04691.7 gi|15669546|ref|NP_248359.1| - 0.57 9.9 5.0 0.38 10.4 0.6 2.5 2 1 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) Kin17_mid PF10357.4 gi|15669546|ref|NP_248359.1| - 0.57 9.8 6.0 0.72 9.4 0.7 2.3 1 1 0 2 2 2 0 Domain of Kin17 curved DNA-binding protein RAMPs PF03787.10 gi|15669546|ref|NP_248359.1| - 0.66 9.7 3.2 0.81 9.4 2.2 1.2 1 0 0 1 1 1 0 RAMP superfamily Xpo1 PF08389.7 gi|15669546|ref|NP_248359.1| - 0.8 9.5 3.9 1.2 9.0 0.2 2.1 1 1 1 2 2 2 0 Exportin 1-like protein Sterile PF03015.14 gi|15669546|ref|NP_248359.1| - 4.4 7.6 6.6 1.1 9.5 1.8 2.1 2 2 0 2 2 2 0 Male sterility protein TrkA_N PF02254.13 gi|15669547|ref|NP_248360.1| - 6.9e-31 106.6 0.1 1.3e-30 105.7 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|15669547|ref|NP_248360.1| - 6.2e-16 57.7 0.0 1.1e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 TrkA-C domain Ion_trans_2 PF07885.11 gi|15669547|ref|NP_248360.1| - 6.6e-16 57.7 15.9 1.1e-15 57.0 11.0 1.3 1 0 0 1 1 1 1 Ion channel Meckelin PF09773.4 gi|15669547|ref|NP_248360.1| - 0.0069 14.2 2.2 0.01 13.6 1.5 1.1 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) DUF1027 PF06265.6 gi|15669547|ref|NP_248360.1| - 0.019 14.8 0.5 0.29 11.0 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1027) Methyltransf_12 PF08242.7 gi|15669547|ref|NP_248360.1| - 0.037 14.4 0.0 0.3 11.6 0.0 2.2 2 1 0 2 2 2 0 Methyltransferase domain DUF4013 PF13197.1 gi|15669547|ref|NP_248360.1| - 0.051 12.9 6.3 0.11 11.8 4.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4013) Ion_trans PF00520.26 gi|15669547|ref|NP_248360.1| - 0.46 9.7 7.5 1.1 8.4 5.2 1.7 1 1 0 1 1 1 0 Ion transport protein Halogen_Hydrol PF10112.4 gi|15669548|ref|NP_248361.1| - 1 8.7 5.3 0.55 9.6 2.4 1.4 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2809 PF10990.3 gi|15669548|ref|NP_248361.1| - 1.4 9.3 8.6 0.44 10.9 2.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2809) KaiC PF06745.8 gi|15669549|ref|NP_248362.1| - 6.7e-90 300.1 0.0 7.6e-90 299.9 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|15669549|ref|NP_248362.1| - 2.6e-07 30.2 0.0 3.9e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain GvpD PF07088.6 gi|15669549|ref|NP_248362.1| - 0.00089 17.6 0.0 0.13 10.5 0.0 2.1 2 0 0 2 2 2 2 GvpD gas vesicle protein DnaB_C PF03796.10 gi|15669549|ref|NP_248362.1| - 0.0037 16.1 0.0 0.0054 15.6 0.0 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_17 PF13207.1 gi|15669549|ref|NP_248362.1| - 0.0057 17.4 0.1 0.014 16.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain PPV_E1_C PF00519.12 gi|15669549|ref|NP_248362.1| - 0.0083 14.7 0.0 0.012 14.2 0.0 1.1 1 0 0 1 1 1 1 Papillomavirus helicase NTPase_1 PF03266.10 gi|15669549|ref|NP_248362.1| - 0.0086 15.8 0.1 0.052 13.2 0.1 2.0 1 1 0 1 1 1 1 NTPase AAA_19 PF13245.1 gi|15669549|ref|NP_248362.1| - 0.013 15.2 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_22 PF13401.1 gi|15669549|ref|NP_248362.1| - 0.015 15.4 0.0 0.024 14.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|15669549|ref|NP_248362.1| - 0.018 14.8 0.0 0.026 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|15669549|ref|NP_248362.1| - 0.026 14.4 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|15669549|ref|NP_248362.1| - 0.029 13.2 0.0 0.042 12.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF2075 PF09848.4 gi|15669549|ref|NP_248362.1| - 0.054 12.4 0.0 0.062 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.1 gi|15669549|ref|NP_248362.1| - 0.11 12.8 0.1 0.28 11.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain HutP PF09021.6 gi|15669549|ref|NP_248362.1| - 0.11 12.6 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 HutP F420_ligase PF01996.11 gi|15669551|ref|NP_248364.1| - 3.6e-48 163.5 0.0 5.6e-48 162.9 0.0 1.3 1 1 0 1 1 1 1 F420-0:Gamma-glutamyl ligase NADHdh PF00146.16 gi|15669552|ref|NP_248365.1| - 1.9e-08 33.7 13.5 1.7e-05 24.0 0.7 2.5 2 1 1 3 3 3 3 NADH dehydrogenase DUF2499 PF10693.4 gi|15669552|ref|NP_248365.1| - 0.051 13.6 0.7 0.17 11.9 0.5 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2499) Oxidored_q6 PF01058.17 gi|15669553|ref|NP_248366.1| - 4.6e-26 90.9 0.9 5.7e-26 90.6 0.6 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1490 PF07371.7 gi|15669553|ref|NP_248366.1| - 0.075 12.9 0.3 0.17 11.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) TruD PF01142.13 gi|161579521|ref|NP_248367.2| - 8.9e-91 304.3 0.4 1.1e-90 304.0 0.3 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) AsnC_trans_reg PF01037.16 gi|161579521|ref|NP_248367.2| - 0.072 12.7 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 AsnC family Lumazine_bd PF12870.2 gi|161579521|ref|NP_248367.2| - 0.93 9.5 7.0 0.99 9.4 1.4 2.9 2 1 1 3 3 3 0 Lumazine-binding domain TraB PF01963.12 gi|15669555|ref|NP_248368.1| - 1.1e-47 162.6 0.0 1.6e-47 162.1 0.0 1.2 1 0 0 1 1 1 1 TraB family DUF606 PF04657.8 gi|15669555|ref|NP_248368.1| - 0.0051 16.8 2.0 0.01 15.9 1.4 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF606 DUF2189 PF09955.4 gi|15669555|ref|NP_248368.1| - 0.015 15.2 1.3 0.032 14.1 0.9 1.6 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) DUF399 PF04187.8 gi|15669555|ref|NP_248368.1| - 0.047 13.1 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF399 DUF2540 PF10802.3 gi|15669555|ref|NP_248368.1| - 2.6 7.7 7.5 0.21 11.2 0.3 2.8 3 1 1 4 4 4 0 Protein of unknown function (DUF2540) Pribosyltran_N PF13793.1 gi|15669556|ref|NP_248369.1| - 7e-31 106.3 1.3 7.7e-28 96.5 0.3 2.5 2 1 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|15669556|ref|NP_248369.1| - 1.8e-18 66.4 1.7 2.9e-18 65.7 0.1 2.1 3 0 0 3 3 3 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|15669556|ref|NP_248369.1| - 8.6e-09 35.3 3.0 1.8e-08 34.3 0.9 2.0 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|15669556|ref|NP_248369.1| - 3.8e-07 29.5 0.2 3.2e-06 26.4 0.0 2.1 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|15669556|ref|NP_248369.1| - 0.0079 15.5 0.1 0.034 13.4 0.1 1.9 1 1 1 2 2 2 1 Phosphoribosyl transferase CbiG_N PF11760.3 gi|15669556|ref|NP_248369.1| - 0.085 12.5 0.2 1.7 8.4 0.0 3.0 3 0 0 3 3 3 0 Cobalamin synthesis G N-terminal ABC_tran PF00005.22 gi|15669557|ref|NP_248370.1| - 1.3e-35 122.6 0.0 1.8e-35 122.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669557|ref|NP_248370.1| - 3.5e-08 33.7 10.7 4.3e-07 30.1 3.7 2.7 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|15669557|ref|NP_248370.1| - 5.8e-07 28.9 0.2 2.7e-06 26.7 0.2 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|15669557|ref|NP_248370.1| - 1.2e-05 24.7 0.0 2.2e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|15669557|ref|NP_248370.1| - 3.5e-05 24.2 1.5 3.5e-05 24.2 1.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|15669557|ref|NP_248370.1| - 0.00019 21.4 0.0 0.00027 20.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|15669557|ref|NP_248370.1| - 0.00038 19.6 0.0 0.0007 18.8 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function, DUF258 AAA_10 PF12846.2 gi|15669557|ref|NP_248370.1| - 0.0055 16.1 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA-like domain SbcCD_C PF13558.1 gi|15669557|ref|NP_248370.1| - 0.0059 16.4 0.0 0.038 13.9 0.0 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.1 gi|15669557|ref|NP_248370.1| - 0.011 15.4 0.0 0.037 13.7 0.0 1.8 2 0 0 2 2 2 0 Part of AAA domain Mg_chelatase PF01078.16 gi|15669557|ref|NP_248370.1| - 0.012 14.7 0.0 0.025 13.7 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA PF00004.24 gi|15669557|ref|NP_248370.1| - 0.029 14.5 0.3 0.26 11.5 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.12 gi|15669557|ref|NP_248370.1| - 0.048 13.0 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein ABC_ATPase PF09818.4 gi|15669557|ref|NP_248370.1| - 0.081 11.4 0.0 0.18 10.3 0.0 1.6 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_22 PF13401.1 gi|15669557|ref|NP_248370.1| - 0.1 12.7 0.2 0.18 11.9 0.1 1.6 1 1 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.17 gi|15669558|ref|NP_248371.1| - 3.6e-21 75.5 13.1 3.6e-21 75.5 9.1 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2231 PF09990.4 gi|15669558|ref|NP_248371.1| - 0.0049 17.1 2.9 0.005 17.1 0.6 2.1 2 0 0 2 2 2 1 Predicted membrane protein (DUF2231) EVE PF01878.13 gi|15669559|ref|NP_248372.1| - 0.027 14.5 0.6 0.035 14.1 0.4 1.3 1 0 0 1 1 1 0 EVE domain Transketolase_C PF02780.15 gi|15669561|ref|NP_248374.1| - 0.016 15.1 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 Transketolase, C-terminal domain DUF3343 PF11823.3 gi|15669561|ref|NP_248374.1| - 0.019 14.1 0.0 0.063 12.5 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Pyr_redox PF00070.22 gi|15669561|ref|NP_248374.1| - 0.052 13.9 0.0 1.7 9.1 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF3213 PF11491.3 gi|15669561|ref|NP_248374.1| - 1.5 8.7 5.4 1.7 8.5 0.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3213) Prenyltransf PF01255.14 gi|15669562|ref|NP_248375.1| - 5.2e-88 293.9 0.3 6.5e-88 293.5 0.2 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Anti-adapt_IraP PF10796.4 gi|15669562|ref|NP_248375.1| - 0.021 15.2 1.1 0.64 10.4 0.1 2.8 2 1 1 3 3 3 0 Sigma-S stabilisation anti-adaptor protein Seryl_tRNA_N PF02403.17 gi|15669562|ref|NP_248375.1| - 0.15 12.0 2.1 0.25 11.3 0.7 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain PrcB_C PF14343.1 gi|15669563|ref|NP_248376.1| - 2e-12 46.6 2.9 3.7e-12 45.7 2.0 1.5 1 0 0 1 1 1 1 PrcB C-terminal Borrelia_REV PF03978.8 gi|15669563|ref|NP_248376.1| - 2.4 7.8 8.1 1.3 8.7 3.9 1.7 1 1 1 2 2 2 0 Borrelia burgdorferi REV protein Myco_arth_vir_N PF09610.5 gi|15669563|ref|NP_248376.1| - 3 7.8 5.9 1.3 9.0 0.4 2.5 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Lactamase_B_2 PF12706.2 gi|15669564|ref|NP_248377.1| - 7.8e-17 61.4 0.0 9.8e-17 61.1 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|15669564|ref|NP_248377.1| - 3.3e-06 26.9 0.0 5.9e-06 26.0 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|15669564|ref|NP_248377.1| - 9.8e-06 25.3 0.4 8.2e-05 22.3 0.3 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Polysacc_synt PF01943.12 gi|15669565|ref|NP_248378.1| - 2.3e-47 161.5 32.7 2.3e-47 161.5 22.7 2.0 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|15669565|ref|NP_248378.1| - 1.1e-20 73.9 46.7 9.9e-16 57.8 10.7 4.1 3 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|15669565|ref|NP_248378.1| - 4.2e-06 26.4 47.4 0.0002 20.8 12.5 3.3 1 1 2 3 3 3 2 Polysaccharide biosynthesis protein MatE PF01554.13 gi|15669565|ref|NP_248378.1| - 4.3e-05 23.1 18.8 4.3e-05 23.1 13.0 3.9 2 2 1 3 3 3 1 MatE FtsJ PF01728.14 gi|15669566|ref|NP_248379.1| - 4e-58 196.3 0.0 5.1e-58 196.0 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.1 gi|15669566|ref|NP_248379.1| - 2.5e-07 30.4 0.3 1.5e-06 27.8 0.2 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669566|ref|NP_248379.1| - 0.00012 21.8 0.0 0.00032 20.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltrans_Mon PF14314.1 gi|15669566|ref|NP_248379.1| - 0.00066 17.6 0.1 0.0008 17.3 0.1 1.1 1 0 0 1 1 1 1 Virus-capping methyltransferase PCMT PF01135.14 gi|15669566|ref|NP_248379.1| - 0.012 15.1 0.0 0.025 14.1 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.1 gi|15669566|ref|NP_248379.1| - 0.039 14.3 0.0 0.1 12.9 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669566|ref|NP_248379.1| - 0.049 14.2 0.2 0.21 12.1 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.6 gi|15669566|ref|NP_248379.1| - 0.049 12.3 0.0 0.085 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) tRNA-synt_1c PF00749.16 gi|15669567|ref|NP_248380.1| - 1.9e-84 283.0 0.0 3.4e-84 282.2 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|15669567|ref|NP_248380.1| - 7.7e-33 113.6 0.4 1.5e-32 112.6 0.3 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1f PF01921.13 gi|15669567|ref|NP_248380.1| - 0.0013 17.4 0.1 0.47 9.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|15669567|ref|NP_248380.1| - 0.0026 16.6 0.1 0.0065 15.3 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (R) PepSY_2 PF13670.1 gi|15669567|ref|NP_248380.1| - 2.9 7.8 4.7 5.1 7.0 0.4 2.9 3 0 0 3 3 3 0 Peptidase propeptide and YPEB domain CPSase_L_D2 PF02786.12 gi|15669568|ref|NP_248381.1| - 1.8e-77 259.3 0.2 2.7e-77 258.8 0.1 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|15669568|ref|NP_248381.1| - 3.3e-22 78.6 0.0 7.7e-22 77.4 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain ATP-grasp_4 PF13535.1 gi|15669568|ref|NP_248381.1| - 2.2e-18 66.6 0.0 4e-18 65.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D3 PF02787.14 gi|15669568|ref|NP_248381.1| - 7.1e-18 64.5 1.5 2e-17 63.0 1.1 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATPgrasp_Ter PF15632.1 gi|15669568|ref|NP_248381.1| - 1.7e-16 59.8 0.0 7e-08 31.5 0.0 2.1 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|15669568|ref|NP_248381.1| - 7.7e-08 31.9 0.1 3.1e-07 30.0 0.1 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|15669568|ref|NP_248381.1| - 1.3e-05 25.1 0.3 2.8e-05 24.0 0.2 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|15669568|ref|NP_248381.1| - 1.6e-05 24.3 0.1 3.4e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain DUF433 PF04255.9 gi|15669568|ref|NP_248381.1| - 0.0022 17.3 0.1 0.73 9.2 0.0 2.8 2 0 0 2 2 2 1 Protein of unknown function (DUF433) GARS_A PF01071.14 gi|15669568|ref|NP_248381.1| - 0.0024 17.4 0.1 0.0058 16.2 0.1 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.1 gi|15669568|ref|NP_248381.1| - 0.012 14.8 0.1 1.9 7.6 0.0 2.6 1 1 1 2 2 2 0 ATP-grasp domain Epimerase PF01370.16 gi|15669568|ref|NP_248381.1| - 0.025 14.0 0.0 0.048 13.0 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family ATP-grasp_2 PF08442.5 gi|15669568|ref|NP_248381.1| - 0.36 10.1 5.6 0.05 12.9 0.2 2.4 2 1 0 2 2 2 0 ATP-grasp domain NTP_transf_2 PF01909.18 gi|15669569|ref|NP_248382.1| - 4.3e-24 84.6 2.9 5.1e-24 84.4 2.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|15669569|ref|NP_248382.1| - 0.0012 18.8 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm DUF294 PF03445.8 gi|15669569|ref|NP_248382.1| - 0.028 14.0 0.0 0.032 13.8 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Adenyl_cycl_N PF12633.2 gi|15669569|ref|NP_248382.1| - 0.04 13.4 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain DUF4269 PF14091.1 gi|15669569|ref|NP_248382.1| - 0.08 12.8 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) Scaffolding_pro PF11418.3 gi|15669569|ref|NP_248382.1| - 0.096 13.0 0.4 0.45 10.8 0.0 1.9 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF86 PF01934.12 gi|15669570|ref|NP_248383.1| - 3.2e-14 52.6 0.2 3.8e-14 52.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 CPSase_L_D2 PF02786.12 gi|15669571|ref|NP_248384.1| - 2.1e-40 138.2 0.1 3.4e-40 137.6 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.14 gi|15669571|ref|NP_248384.1| - 3.4e-27 94.6 0.4 1.5e-26 92.6 0.0 2.2 2 0 0 2 2 2 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.17 gi|15669571|ref|NP_248384.1| - 1.4e-26 92.2 0.8 3.3e-25 87.8 0.0 3.2 4 0 0 4 4 4 1 MGS-like domain CPSase_L_chain PF00289.17 gi|15669571|ref|NP_248384.1| - 5.6e-25 87.5 0.1 1.7e-24 86.0 0.0 1.9 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain ATP-grasp_4 PF13535.1 gi|15669571|ref|NP_248384.1| - 5.9e-17 61.9 0.1 1.6e-16 60.5 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|15669571|ref|NP_248384.1| - 7.6e-16 57.7 0.1 4.5e-15 55.2 0.1 2.0 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|15669571|ref|NP_248384.1| - 4.2e-09 36.0 0.1 9.1e-09 34.9 0.1 1.6 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.17 gi|15669571|ref|NP_248384.1| - 6.1e-09 35.4 0.1 1.2e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|15669571|ref|NP_248384.1| - 1.6e-07 31.3 0.1 3.5e-07 30.2 0.1 1.6 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|15669571|ref|NP_248384.1| - 4.7e-06 26.2 0.2 1.5e-05 24.6 0.1 1.8 1 1 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.1 gi|15669571|ref|NP_248384.1| - 0.0048 16.1 0.1 0.025 13.8 0.0 2.1 2 0 0 2 2 2 1 ATP-grasp domain HTH_37 PF13744.1 gi|15669571|ref|NP_248384.1| - 0.037 13.8 0.5 0.12 12.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Hydrolase PF00702.21 gi|15669571|ref|NP_248384.1| - 0.094 13.1 2.2 1.6 9.0 0.0 3.0 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase EVE PF01878.13 gi|15669572|ref|NP_248385.1| - 1.2e-24 86.9 1.0 1.4e-24 86.7 0.7 1.0 1 0 0 1 1 1 1 EVE domain Dev_Cell_Death PF10539.4 gi|15669572|ref|NP_248385.1| - 0.00022 20.7 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 Development and cell death domain HPD PF05044.7 gi|15669572|ref|NP_248385.1| - 0.0082 15.8 0.7 0.031 13.9 0.5 1.8 1 1 0 1 1 1 1 Homeo-prospero domain TatD_DNase PF01026.16 gi|15669573|ref|NP_248386.1| - 1.3e-30 106.4 0.3 1.6e-30 106.1 0.2 1.0 1 0 0 1 1 1 1 TatD related DNase Nitroreductase PF00881.19 gi|15669574|ref|NP_248387.1| - 1.4e-28 99.8 0.0 1.6e-28 99.6 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family Trm56 PF01994.11 gi|15669575|ref|NP_248388.1| - 8.3e-56 186.9 0.2 1.1e-55 186.5 0.1 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SPOUT_MTase_2 PF14419.1 gi|15669575|ref|NP_248388.1| - 0.00024 20.3 0.1 0.00032 19.9 0.0 1.3 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP DUF531 PF04407.7 gi|15669575|ref|NP_248388.1| - 0.088 12.6 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF531) DUF111 PF01969.12 gi|15669577|ref|NP_248390.1| - 1.2e-121 406.1 0.1 1.4e-121 405.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 AdoHcyase PF05221.12 gi|15669578|ref|NP_248391.1| - 9e-69 231.3 0.2 1e-68 231.2 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|15669578|ref|NP_248391.1| - 6.4e-55 185.4 1.6 6.4e-55 185.4 1.1 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|15669578|ref|NP_248391.1| - 1.4e-10 40.5 0.2 6.3e-10 38.4 0.1 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|15669578|ref|NP_248391.1| - 1.5e-06 27.6 0.1 3e-06 26.7 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain AlaDh_PNT_C PF01262.16 gi|15669578|ref|NP_248391.1| - 0.0011 18.6 3.0 0.0057 16.2 2.1 2.2 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain adh_short_C2 PF13561.1 gi|15669578|ref|NP_248391.1| - 0.017 14.9 0.0 1.6 8.4 0.0 2.3 1 1 1 2 2 2 0 Enoyl-(Acyl carrier protein) reductase TrkA_N PF02254.13 gi|15669578|ref|NP_248391.1| - 0.019 14.9 0.2 0.063 13.2 0.1 2.0 2 0 0 2 2 2 0 TrkA-N domain Hydantoinase_A PF01968.13 gi|15669578|ref|NP_248391.1| - 0.072 12.1 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase Pyr_redox_2 PF07992.9 gi|15669578|ref|NP_248391.1| - 0.097 12.5 0.0 1.6 8.5 0.0 2.3 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Robl_LC7 PF03259.12 gi|15669579|ref|NP_248392.1| - 2.1e-16 59.2 0.0 2.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain RGM_C PF06534.8 gi|15669580|ref|NP_248393.1| - 0.025 13.7 0.0 0.028 13.5 0.0 1.1 1 0 0 1 1 1 0 Repulsive guidance molecule (RGM) C-terminus HsdM_N PF12161.3 gi|15669580|ref|NP_248393.1| - 0.045 14.1 1.0 0.093 13.1 0.5 1.7 1 1 1 2 2 2 0 HsdM N-terminal domain Aminotran_1_2 PF00155.16 gi|15669581|ref|NP_248394.1| - 2.6e-44 151.6 0.0 3.3e-44 151.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|15669581|ref|NP_248394.1| - 0.14 10.8 0.0 0.24 10.0 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V HMGL-like PF00682.14 gi|15669582|ref|NP_248395.1| - 2.1e-72 243.5 0.3 4.1e-72 242.6 0.2 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|15669582|ref|NP_248395.1| - 2.2e-31 108.4 2.5 4.6e-31 107.3 1.8 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF2838 PF10998.3 gi|15669584|ref|NP_248397.1| - 0.016 15.0 0.2 3.1 7.7 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2838) MORN_2 PF07661.8 gi|15669584|ref|NP_248397.1| - 0.13 12.3 4.8 16 5.9 0.2 4.4 3 0 0 3 3 3 0 MORN repeat variant Antig_Caf1 PF09255.5 gi|15669585|ref|NP_248398.1| - 0.083 12.7 0.0 0.098 12.5 0.0 1.2 1 0 0 1 1 1 0 Caf1 Capsule antigen DUF4330 PF14221.1 gi|15669585|ref|NP_248398.1| - 0.12 12.2 0.3 0.18 11.6 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4330) DUF2963 PF11178.3 gi|15669585|ref|NP_248398.1| - 0.18 11.2 1.1 0.41 10.0 0.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2963) Lectin_legB PF00139.14 gi|15669586|ref|NP_248399.1| - 4.2e-63 212.9 9.0 1.2e-32 113.1 0.1 3.7 3 0 0 3 3 3 2 Legume lectin domain Beta_helix PF13229.1 gi|15669586|ref|NP_248399.1| - 2.5e-29 102.0 216.8 1.4e-10 41.1 32.7 13.8 8 2 6 15 15 15 6 Right handed beta helix region A2M_N PF01835.14 gi|15669586|ref|NP_248399.1| - 4e-05 23.8 0.1 0.07 13.3 0.0 3.5 3 0 0 3 3 3 2 MG2 domain DUF3464 PF11947.3 gi|15669587|ref|NP_248400.1| - 0.43 10.0 4.7 0.8 9.1 3.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3464) HTH_24 PF13412.1 gi|15669588|ref|NP_248401.1| - 1.8e-18 65.6 2.7 1.1e-08 34.2 0.1 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|15669588|ref|NP_248401.1| - 8.9e-18 63.8 0.0 4.5e-09 35.9 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.15 gi|15669588|ref|NP_248401.1| - 1.1e-14 53.8 0.1 4.6e-07 29.4 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|15669588|ref|NP_248401.1| - 2.5e-10 39.9 2.7 0.00046 19.8 0.0 2.9 3 0 0 3 3 3 2 Sugar-specific transcriptional regulator TrmB RepL PF05732.6 gi|15669588|ref|NP_248401.1| - 2.5e-07 30.0 0.2 0.0076 15.4 0.0 2.5 2 0 0 2 2 2 2 Firmicute plasmid replication protein (RepL) Penicillinase_R PF03965.11 gi|15669588|ref|NP_248401.1| - 7.8e-07 29.1 0.0 0.04 14.0 0.0 2.6 3 0 0 3 3 2 2 Penicillinase repressor MarR PF01047.17 gi|15669588|ref|NP_248401.1| - 4.2e-05 23.1 0.1 0.052 13.2 0.0 2.5 2 0 0 2 2 2 2 MarR family HTH_34 PF13601.1 gi|15669588|ref|NP_248401.1| - 7.7e-05 22.6 0.5 0.16 12.0 0.0 3.0 3 1 0 3 3 3 2 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|15669588|ref|NP_248401.1| - 0.00014 21.9 0.0 0.16 12.1 0.0 2.4 2 0 0 2 2 2 2 Transcriptional regulator HTH_12 PF08461.5 gi|15669588|ref|NP_248401.1| - 0.00016 21.2 0.3 0.059 13.1 0.0 2.9 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain DUF2250 PF10007.4 gi|15669588|ref|NP_248401.1| - 0.00059 19.6 0.9 0.045 13.6 0.2 2.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) Phage_rep_org_N PF09681.5 gi|15669588|ref|NP_248401.1| - 0.00088 18.8 0.0 0.45 10.0 0.1 2.6 2 0 0 2 2 2 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_27 PF13463.1 gi|15669588|ref|NP_248401.1| - 0.003 17.8 0.0 0.87 9.9 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF4423 PF14394.1 gi|15669588|ref|NP_248401.1| - 0.0042 16.6 0.1 0.1 12.1 0.0 2.5 3 0 0 3 3 2 1 Domain of unknown function (DUF4423) RPA_C PF08784.6 gi|15669588|ref|NP_248401.1| - 0.0058 17.0 0.0 3.3 8.1 0.0 2.4 2 0 0 2 2 2 1 Replication protein A C terminal HTH_36 PF13730.1 gi|15669588|ref|NP_248401.1| - 0.0059 16.6 0.1 0.024 14.7 0.1 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain Glyco_hydro_42M PF08532.5 gi|15669588|ref|NP_248401.1| - 0.0088 15.2 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain MarR_2 PF12802.2 gi|15669588|ref|NP_248401.1| - 0.015 14.9 0.0 6.3 6.5 0.0 2.3 2 0 0 2 2 2 0 MarR family FaeA PF04703.7 gi|15669588|ref|NP_248401.1| - 0.025 14.7 0.1 0.11 12.7 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein HTH_11 PF08279.7 gi|15669588|ref|NP_248401.1| - 0.031 13.9 2.0 0.066 12.8 0.1 2.5 3 0 0 3 3 2 0 HTH domain HTH_30 PF13556.1 gi|15669588|ref|NP_248401.1| - 0.046 13.3 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_DeoR PF08220.7 gi|15669588|ref|NP_248401.1| - 0.047 13.2 0.0 0.3 10.6 0.0 2.1 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain PaaX PF07848.7 gi|15669588|ref|NP_248401.1| - 0.049 13.6 0.1 0.23 11.4 0.0 2.2 2 0 0 2 2 2 0 PaaX-like protein B-block_TFIIIC PF04182.7 gi|15669588|ref|NP_248401.1| - 0.058 13.2 0.5 2.6 7.9 0.0 2.7 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC HTH_Tnp_IS630 PF01710.11 gi|15669588|ref|NP_248401.1| - 0.08 12.6 0.3 5.9 6.5 0.0 2.6 2 0 0 2 2 2 0 Transposase AAA_18 PF13238.1 gi|15669589|ref|NP_248402.1| - 1.2e-19 70.9 2.0 3.9e-19 69.2 0.1 1.9 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15669589|ref|NP_248402.1| - 6e-12 46.4 1.1 2.7e-11 44.3 0.1 2.0 1 1 1 2 2 2 1 AAA domain ADK PF00406.17 gi|15669589|ref|NP_248402.1| - 0.00066 19.5 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.1 gi|15669589|ref|NP_248402.1| - 0.0029 17.4 0.0 0.012 15.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|15669589|ref|NP_248402.1| - 0.019 13.7 0.3 0.047 12.4 0.0 1.8 2 0 0 2 2 2 0 ArgK protein KTI12 PF08433.5 gi|15669589|ref|NP_248402.1| - 0.025 13.7 0.5 0.37 9.9 0.1 2.3 2 1 0 2 2 2 0 Chromatin associated protein KTI12 Sec34 PF04136.10 gi|15669589|ref|NP_248402.1| - 0.027 14.1 1.2 1.8 8.2 0.3 2.2 2 0 0 2 2 2 0 Sec34-like family CoaE PF01121.15 gi|15669589|ref|NP_248402.1| - 0.045 13.1 0.1 0.39 10.0 0.0 2.2 1 1 1 2 2 2 0 Dephospho-CoA kinase AAA_30 PF13604.1 gi|15669589|ref|NP_248402.1| - 0.18 11.3 0.0 0.42 10.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain PRK PF00485.13 gi|15669589|ref|NP_248402.1| - 0.24 10.9 1.2 7.3 6.0 0.1 2.5 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family Class_IIIsignal PF04021.7 gi|15669590|ref|NP_248403.1| - 1.7e-11 43.3 3.7 2.4e-11 42.9 2.6 1.2 1 0 0 1 1 1 1 Class III signal peptide ABC_membrane PF00664.18 gi|15669590|ref|NP_248403.1| - 0.0049 16.3 1.0 0.0059 16.0 0.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region UPF0118 PF01594.11 gi|15669590|ref|NP_248403.1| - 0.045 12.7 1.3 0.046 12.6 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF20 Sigma_reg_N PF13800.1 gi|15669590|ref|NP_248403.1| - 0.086 12.8 1.9 0.11 12.5 1.3 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Arch_flagellin PF01917.11 gi|15669590|ref|NP_248403.1| - 0.087 12.4 1.3 0.1 12.2 0.9 1.0 1 0 0 1 1 1 0 Archaebacterial flagellin Glucos_trans_II PF14264.1 gi|15669590|ref|NP_248403.1| - 0.095 11.6 0.9 0.092 11.7 0.6 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII TarH PF02203.10 gi|15669590|ref|NP_248403.1| - 0.11 12.3 1.0 0.12 12.1 0.7 1.0 1 0 0 1 1 1 0 Tar ligand binding domain homologue AcylCoA_dehyd_C PF12186.3 gi|15669590|ref|NP_248403.1| - 0.13 12.1 0.1 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal DUF1180 PF06679.7 gi|15669590|ref|NP_248403.1| - 0.14 12.0 0.2 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) DEAD PF00270.24 gi|15669591|ref|NP_248404.1| - 9.1e-29 100.1 0.2 2.5e-27 95.4 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15669591|ref|NP_248404.1| - 7.1e-15 54.6 0.0 3e-14 52.6 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|15669591|ref|NP_248404.1| - 4e-08 33.3 0.0 1.3e-07 31.6 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C_2 PF13307.1 gi|15669591|ref|NP_248404.1| - 0.037 13.9 0.1 0.59 10.0 0.0 2.8 2 0 0 2 2 2 0 Helicase C-terminal domain MtrD PF04207.7 gi|15669592|ref|NP_248405.1| - 0.0042 16.5 0.2 0.0071 15.7 0.1 1.2 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D DUF4097 PF13349.1 gi|15669592|ref|NP_248405.1| - 0.026 14.0 9.1 1.9 7.9 0.5 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4097) DUF1628 PF07790.6 gi|15669592|ref|NP_248405.1| - 0.064 14.0 3.6 0.089 13.5 0.5 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1628) DUF1469 PF07332.6 gi|15669592|ref|NP_248405.1| - 0.079 12.6 0.2 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF3185 PF11381.3 gi|15669592|ref|NP_248405.1| - 0.55 10.0 4.8 1.7 8.4 3.3 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) DUF1628 PF07790.6 gi|15669593|ref|NP_248406.1| - 0.013 16.2 0.1 0.034 14.9 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1628) DUF1469 PF07332.6 gi|15669593|ref|NP_248406.1| - 0.11 12.2 0.2 0.17 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) CBS PF00571.23 gi|15669594|ref|NP_248407.1| - 1.9e-58 193.9 13.4 1.6e-17 62.9 0.4 4.3 4 0 0 4 4 4 4 CBS domain Acylphosphatase PF00708.13 gi|15669595|ref|NP_248408.1| - 8.5e-14 51.4 0.0 8.7e-14 51.3 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase PyrI PF01948.13 gi|15669596|ref|NP_248409.1| - 1.6e-33 114.5 8.5 1.6e-33 114.5 5.9 1.5 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|15669596|ref|NP_248409.1| - 9.1e-19 66.6 5.4 1.5e-18 65.9 3.7 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF126 PF01989.11 gi|15669597|ref|NP_248410.1| - 2.2e-29 100.9 0.0 4e-29 100.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF126 PEP-utilizers PF00391.18 gi|15669597|ref|NP_248410.1| - 0.05 13.1 0.6 0.087 12.3 0.4 1.4 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain NOG1 PF06858.9 gi|15669598|ref|NP_248411.1| - 1.4e-23 82.5 1.3 3e-23 81.4 0.9 1.6 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.18 gi|15669598|ref|NP_248411.1| - 3.1e-19 69.0 0.1 7e-19 67.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15669598|ref|NP_248411.1| - 3.5e-17 62.1 0.4 6e-17 61.3 0.3 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.4 gi|15669598|ref|NP_248411.1| - 1.5e-13 50.4 0.1 3.5e-13 49.2 0.1 1.6 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.22 gi|15669598|ref|NP_248411.1| - 7.3e-08 32.0 1.0 5.2e-05 22.7 0.3 2.6 1 1 0 2 2 2 2 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|15669598|ref|NP_248411.1| - 1.7e-07 31.7 0.0 3.5e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Miro-like protein Arf PF00025.16 gi|15669598|ref|NP_248411.1| - 2e-07 30.4 3.1 0.00011 21.4 0.8 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family cobW PF02492.14 gi|15669598|ref|NP_248411.1| - 5.8e-06 25.8 0.7 0.0016 17.9 0.1 2.3 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain DUF258 PF03193.11 gi|15669598|ref|NP_248411.1| - 5.4e-05 22.4 0.1 0.0033 16.6 0.0 2.9 2 1 0 2 2 2 1 Protein of unknown function, DUF258 SRPRB PF09439.5 gi|15669598|ref|NP_248411.1| - 7.8e-05 21.9 0.7 0.00016 20.9 0.5 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_17 PF13207.1 gi|15669598|ref|NP_248411.1| - 0.0007 20.4 1.3 0.0032 18.2 0.9 2.2 1 1 0 1 1 1 1 AAA domain Dynamin_N PF00350.18 gi|15669598|ref|NP_248411.1| - 0.002 17.9 1.3 0.49 10.1 0.0 2.8 1 1 2 3 3 3 1 Dynamin family Ras PF00071.17 gi|15669598|ref|NP_248411.1| - 0.0065 15.8 1.0 0.5 9.7 0.1 2.4 2 0 0 2 2 2 1 Ras family DUF137 PF02006.11 gi|15669598|ref|NP_248411.1| - 0.016 14.5 0.2 0.077 12.3 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function DUF137 MobB PF03205.9 gi|15669598|ref|NP_248411.1| - 0.018 14.7 0.5 0.067 12.9 0.0 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|15669598|ref|NP_248411.1| - 0.024 14.9 4.1 0.24 11.7 2.8 2.6 1 1 0 1 1 1 0 AAA domain ArgK PF03308.11 gi|15669598|ref|NP_248411.1| - 0.039 12.7 0.3 1.2 7.7 0.0 2.4 2 0 0 2 2 2 0 ArgK protein DUF1967 PF09269.6 gi|15669598|ref|NP_248411.1| - 0.062 12.9 1.4 1.5 8.4 0.1 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1967) AAA_14 PF13173.1 gi|15669598|ref|NP_248411.1| - 0.066 13.1 2.2 0.61 9.9 1.1 2.9 2 1 0 2 2 2 0 AAA domain AAA PF00004.24 gi|15669598|ref|NP_248411.1| - 0.069 13.3 1.4 2.2 8.4 0.3 3.2 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.5 gi|15669598|ref|NP_248411.1| - 0.076 12.2 0.5 0.24 10.5 0.0 2.0 3 0 0 3 3 3 0 Chromatin associated protein KTI12 ATP_bind_1 PF03029.12 gi|15669598|ref|NP_248411.1| - 0.081 12.4 0.1 0.95 8.9 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_25 PF13481.1 gi|15669598|ref|NP_248411.1| - 0.082 12.3 0.1 0.5 9.7 0.0 2.3 2 1 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|15669598|ref|NP_248411.1| - 0.18 11.4 0.6 16 5.0 0.0 2.9 3 0 0 3 3 3 0 NACHT domain UPF0113 PF03657.8 gi|15669600|ref|NP_248413.1| - 9.6e-64 213.9 6.0 1.1e-63 213.7 4.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0113) Nol1_Nop2_Fmu_2 PF13636.1 gi|15669600|ref|NP_248413.1| - 0.037 14.0 0.1 0.091 12.8 0.0 1.6 1 1 1 2 2 2 0 pre-rRNA processing and ribosome biogenesis Aldedh PF00171.17 gi|15669601|ref|NP_248414.1| - 1.4e-156 521.4 0.1 1.8e-156 521.1 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|15669601|ref|NP_248414.1| - 6.2e-06 25.1 0.0 1.1e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.6 gi|15669601|ref|NP_248414.1| - 0.0029 16.8 0.1 0.0063 15.7 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1487) Pro_isomerase PF00160.16 gi|15669602|ref|NP_248415.1| - 2.2e-05 24.7 1.5 0.33 11.1 0.0 3.8 3 1 0 3 3 3 2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PASTA PF03793.14 gi|15669602|ref|NP_248415.1| - 0.0027 17.3 0.1 0.0084 15.7 0.1 1.9 1 0 0 1 1 1 1 PASTA domain Imm-NTF2 PF15655.1 gi|15669602|ref|NP_248415.1| - 0.15 12.5 0.3 0.15 12.5 0.2 2.5 3 0 0 3 3 3 0 NTF2 fold immunity protein YbjQ_1 PF01906.12 gi|15669603|ref|NP_248416.1| - 1.4e-24 86.5 3.7 2.2e-24 85.8 2.6 1.3 1 1 0 1 1 1 1 Putative heavy-metal-binding SRP14 PF02290.10 gi|15669603|ref|NP_248416.1| - 0.054 13.4 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle 14kD protein Tannase PF07519.6 gi|15669603|ref|NP_248416.1| - 0.061 12.0 0.0 0.066 11.9 0.0 1.1 1 0 0 1 1 1 0 Tannase and feruloyl esterase SRR PF07709.6 gi|15669603|ref|NP_248416.1| - 0.1 12.8 1.4 0.28 11.5 0.9 1.8 1 0 0 1 1 1 0 Seven Residue Repeat Phage_GPA PF05840.8 gi|15669604|ref|NP_248417.1| - 0.00021 20.1 0.1 0.0003 19.6 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage replication gene A protein (GPA) N_NLPC_P60 PF12912.2 gi|15669604|ref|NP_248417.1| - 0.0091 16.0 0.0 0.022 14.8 0.0 1.7 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term HTH_6 PF01418.12 gi|15669604|ref|NP_248417.1| - 0.034 13.8 0.0 0.067 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family CS PF04969.11 gi|15669604|ref|NP_248417.1| - 0.086 13.3 6.9 0.16 12.5 0.9 3.2 3 0 0 3 3 3 0 CS domain Spore_YhaL PF14147.1 gi|15669604|ref|NP_248417.1| - 0.35 10.3 3.0 13 5.3 0.3 2.6 2 0 0 2 2 2 0 Sporulation protein YhaL tRNA-synt_1b PF00579.20 gi|15669605|ref|NP_248418.1| - 1.2e-62 211.6 0.0 1.5e-62 211.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) AIRS_C PF02769.17 gi|15669606|ref|NP_248419.1| - 9.2e-17 61.4 0.1 1.9e-16 60.4 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|15669606|ref|NP_248419.1| - 4.6e-12 46.0 1.0 9.2e-12 45.0 0.7 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NYD-SP28 PF14772.1 gi|15669606|ref|NP_248419.1| - 0.075 13.1 0.3 0.075 13.1 0.2 1.9 2 0 0 2 2 2 0 Sperm tail Lon_C PF05362.8 gi|15669607|ref|NP_248420.1| - 2.2e-27 95.7 0.2 4.4e-27 94.7 0.1 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Mg_chelatase PF01078.16 gi|15669607|ref|NP_248420.1| - 3.8e-13 49.0 0.1 3.1e-06 26.4 0.0 2.9 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_32 PF13654.1 gi|15669607|ref|NP_248420.1| - 7.3e-13 48.0 0.0 7.4e-10 38.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|15669607|ref|NP_248420.1| - 7.9e-11 41.7 0.0 6.3e-07 29.0 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.1 gi|15669607|ref|NP_248420.1| - 5.6e-09 35.5 0.2 1.2e-08 34.4 0.1 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase MCM PF00493.18 gi|15669607|ref|NP_248420.1| - 6.3e-08 31.7 1.0 0.0056 15.5 0.0 2.7 2 1 0 2 2 2 2 MCM2/3/5 family AAA_5 PF07728.9 gi|15669607|ref|NP_248420.1| - 4.8e-07 29.5 0.0 0.039 13.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|15669607|ref|NP_248420.1| - 7e-05 21.9 0.0 0.17 10.8 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA PF00004.24 gi|15669607|ref|NP_248420.1| - 0.00021 21.5 0.0 0.016 15.4 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.8 gi|15669607|ref|NP_248420.1| - 0.0011 17.7 0.1 0.97 8.0 0.0 3.0 3 0 0 3 3 3 1 TIP49 C-terminus AAA_16 PF13191.1 gi|15669607|ref|NP_248420.1| - 0.0023 17.9 0.0 0.0044 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain Sigma54_activ_2 PF14532.1 gi|15669607|ref|NP_248420.1| - 0.0032 17.5 0.3 3.2 7.8 0.0 3.0 4 0 0 4 4 3 1 Sigma-54 interaction domain AAA_22 PF13401.1 gi|15669607|ref|NP_248420.1| - 0.004 17.3 0.0 0.58 10.2 0.0 2.7 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|15669607|ref|NP_248420.1| - 0.0041 16.5 0.0 0.0078 15.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein FeoB_N PF02421.13 gi|15669607|ref|NP_248420.1| - 0.024 13.9 0.1 4.2 6.6 0.0 3.2 3 1 0 3 3 3 0 Ferrous iron transport protein B NTPase_1 PF03266.10 gi|15669607|ref|NP_248420.1| - 0.042 13.5 0.0 2.7 7.6 0.0 2.6 2 0 0 2 2 2 0 NTPase DUF815 PF05673.8 gi|15669607|ref|NP_248420.1| - 0.053 12.4 0.0 0.092 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_19 PF13245.1 gi|15669607|ref|NP_248420.1| - 0.11 12.2 0.0 0.32 10.7 0.0 1.8 1 0 0 1 1 1 0 Part of AAA domain AAA_30 PF13604.1 gi|15669607|ref|NP_248420.1| - 0.12 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|15669607|ref|NP_248420.1| - 0.13 11.7 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|15669607|ref|NP_248420.1| - 0.17 11.0 0.0 0.35 10.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 PIG-P PF08510.7 gi|15669607|ref|NP_248420.1| - 1.9 8.1 4.5 0.97 9.0 1.4 1.7 2 0 0 2 2 1 0 PIG-P Mlp PF03304.8 gi|15669608|ref|NP_248421.1| - 0.0032 17.4 10.1 0.0032 17.4 7.0 1.5 2 0 0 2 2 2 1 Mlp lipoprotein family DUF342 PF03961.8 gi|15669608|ref|NP_248421.1| - 0.0072 14.7 10.2 0.0089 14.4 7.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF342) HSCB_C PF07743.8 gi|15669608|ref|NP_248421.1| - 0.0082 16.5 4.7 0.018 15.5 3.2 1.7 1 1 0 1 1 1 1 HSCB C-terminal oligomerisation domain SecA_DEAD PF07517.9 gi|15669608|ref|NP_248421.1| - 0.024 13.9 1.4 0.034 13.4 1.0 1.3 1 0 0 1 1 1 0 SecA DEAD-like domain DUF2232 PF09991.4 gi|15669608|ref|NP_248421.1| - 0.051 12.5 5.2 0.039 12.9 2.4 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2232) Exonuc_VII_L PF02601.10 gi|15669608|ref|NP_248421.1| - 0.055 12.6 3.0 0.059 12.5 2.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit E1-E2_ATPase PF00122.15 gi|15669608|ref|NP_248421.1| - 0.057 12.4 0.7 0.088 11.8 0.3 1.3 1 1 0 1 1 1 0 E1-E2 ATPase DUF4337 PF14235.1 gi|15669608|ref|NP_248421.1| - 0.061 13.1 0.9 0.081 12.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Synaptobrevin PF00957.16 gi|15669608|ref|NP_248421.1| - 0.1 12.2 10.5 0.67 9.5 7.3 2.0 1 1 0 1 1 1 0 Synaptobrevin GlnE PF03710.10 gi|15669608|ref|NP_248421.1| - 0.12 11.6 0.2 0.14 11.3 0.1 1.1 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase KNOX2 PF03791.8 gi|15669608|ref|NP_248421.1| - 0.12 11.6 1.3 0.4 9.9 0.9 2.0 1 1 0 1 1 1 0 KNOX2 domain DUF2278 PF10042.4 gi|15669608|ref|NP_248421.1| - 0.16 11.7 1.3 0.21 11.2 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2278) DUF4375 PF14300.1 gi|15669608|ref|NP_248421.1| - 0.23 11.4 6.7 0.14 12.1 3.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) T2SF PF00482.18 gi|15669608|ref|NP_248421.1| - 0.29 11.0 2.4 0.85 9.5 1.6 1.9 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein F PMT_C PF11647.3 gi|15669608|ref|NP_248421.1| - 0.3 10.7 2.4 0.46 10.1 0.6 2.2 1 1 1 2 2 2 0 C-terminal region of Pasteurella multocida toxin residues 569-1285 Syntaxin PF00804.20 gi|15669608|ref|NP_248421.1| - 0.35 11.0 10.7 0.68 10.1 7.4 1.5 1 0 0 1 1 1 0 Syntaxin AAA_23 PF13476.1 gi|15669608|ref|NP_248421.1| - 0.35 11.1 10.1 0.46 10.7 7.0 1.3 1 0 0 1 1 1 0 AAA domain DUF4419 PF14388.1 gi|15669608|ref|NP_248421.1| - 0.38 9.9 4.6 0.087 12.0 1.1 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4419) YtxH PF12732.2 gi|15669608|ref|NP_248421.1| - 0.47 10.8 7.0 0.51 10.7 1.4 2.2 1 1 1 2 2 2 0 YtxH-like protein Imm5 PF14423.1 gi|15669608|ref|NP_248421.1| - 0.5 9.9 6.8 2 7.9 4.8 1.8 1 1 0 1 1 1 0 Immunity protein Imm5 DUF4559 PF15112.1 gi|15669608|ref|NP_248421.1| - 0.5 9.4 9.5 0.69 9.0 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Tox-REase-7 PF15649.1 gi|15669608|ref|NP_248421.1| - 0.74 9.9 5.5 0.51 10.5 2.0 2.0 1 1 1 2 2 2 0 Restriction endonuclease fold toxin 7 COG2 PF06148.6 gi|15669608|ref|NP_248421.1| - 0.77 9.6 7.4 0.71 9.7 2.8 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF912 PF06024.7 gi|15669608|ref|NP_248421.1| - 0.83 9.7 7.8 1.7 8.7 5.4 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) MitMem_reg PF13012.1 gi|15669608|ref|NP_248421.1| - 0.92 9.6 11.8 0.52 10.4 4.6 2.3 1 1 1 2 2 2 0 Maintenance of mitochondrial structure and function DUF1451 PF07295.6 gi|15669608|ref|NP_248421.1| - 1.3 8.7 5.3 4.3 7.1 3.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1451) DUF4200 PF13863.1 gi|15669608|ref|NP_248421.1| - 1.7 8.6 16.2 9.4 6.2 11.2 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DUF2935 PF11155.3 gi|15669608|ref|NP_248421.1| - 1.8 8.6 9.1 8.3 6.5 6.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) DUF1664 PF07889.7 gi|15669608|ref|NP_248421.1| - 1.8 8.3 8.7 3.4 7.4 2.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) EMP24_GP25L PF01105.19 gi|15669608|ref|NP_248421.1| - 1.9 8.1 9.1 2.5 7.7 2.8 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD DUF2203 PF09969.4 gi|15669608|ref|NP_248421.1| - 2.1 8.5 5.2 5.2 7.3 3.6 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF2951 PF11166.3 gi|15669608|ref|NP_248421.1| - 5 7.0 14.8 8.7 6.2 5.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) GP41 PF00517.12 gi|15669608|ref|NP_248421.1| - 7.4 6.0 12.6 27 4.2 8.7 1.9 1 1 0 1 1 1 0 Retroviral envelope protein DUF4163 PF13739.1 gi|15669608|ref|NP_248421.1| - 8.8 7.1 12.1 53 4.6 6.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4163) Aldolase_II PF00596.16 gi|15669609|ref|NP_248422.1| - 1.4e-42 145.4 0.0 1.5e-42 145.2 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain UPF0147 PF03685.8 gi|15669610|ref|NP_248423.1| - 2.3e-37 126.7 1.3 2.7e-37 126.4 0.9 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.7 gi|15669610|ref|NP_248423.1| - 0.002 18.2 0.2 1.3 9.1 0.0 2.2 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0253) Intein_splicing PF14890.1 gi|15669611|ref|NP_248424.1| - 3.2e-159 529.0 15.9 3.2e-159 529.0 11.0 2.2 3 0 0 3 3 3 1 Intein splicing domain SIS PF01380.17 gi|15669611|ref|NP_248424.1| - 1.3e-36 125.0 2.9 4e-24 84.6 0.4 2.4 2 0 0 2 2 2 2 SIS domain GATase_2 PF00310.16 gi|15669611|ref|NP_248424.1| - 1e-21 77.0 0.3 4.4e-15 55.2 0.0 2.3 2 0 0 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|15669611|ref|NP_248424.1| - 1.7e-21 76.2 0.0 5.1e-21 74.6 0.0 1.9 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|15669611|ref|NP_248424.1| - 5.5e-20 71.6 0.0 1.2e-19 70.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain LAGLIDADG_3 PF14528.1 gi|15669611|ref|NP_248424.1| - 5.8e-19 68.1 13.2 5.7e-14 52.1 0.9 4.7 4 0 0 4 4 4 2 LAGLIDADG-like domain HTH_19 PF12844.2 gi|15669611|ref|NP_248424.1| - 2.1e-10 40.4 4.1 9.7e-10 38.3 1.2 3.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|15669611|ref|NP_248424.1| - 8e-10 38.4 0.4 3.4e-09 36.4 0.3 2.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|15669611|ref|NP_248424.1| - 1.3e-06 28.5 0.0 2.6e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain GATase_4 PF13230.1 gi|15669611|ref|NP_248424.1| - 1.9e-05 23.5 0.7 4e-05 22.4 0.5 1.5 1 0 0 1 1 1 1 Glutamine amidotransferases class-II HTH_25 PF13413.1 gi|15669611|ref|NP_248424.1| - 6.5e-05 22.4 0.1 0.0003 20.3 0.0 2.2 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|15669611|ref|NP_248424.1| - 0.00083 19.1 0.0 0.0022 17.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|15669611|ref|NP_248424.1| - 0.001 19.2 0.2 0.0026 17.9 0.1 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Hint PF01079.15 gi|15669611|ref|NP_248424.1| - 0.0066 15.6 0.1 0.017 14.3 0.0 1.6 1 0 0 1 1 1 1 Hint module SIS_2 PF13580.1 gi|15669611|ref|NP_248424.1| - 0.018 14.7 0.2 27 4.4 0.0 3.7 2 1 1 3 3 3 0 SIS domain GATase_3 PF07685.9 gi|15669612|ref|NP_248425.1| - 1.1e-28 99.7 0.1 1.8e-28 99.1 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|15669612|ref|NP_248425.1| - 9.3e-24 83.9 0.2 1.4e-23 83.3 0.1 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|15669612|ref|NP_248425.1| - 1.4e-17 63.9 0.6 1.7e-09 37.6 0.0 2.4 1 1 1 2 2 2 2 AAA domain SNO PF01174.14 gi|15669612|ref|NP_248425.1| - 0.081 12.5 0.0 0.23 11.0 0.0 1.7 1 0 0 1 1 1 0 SNO glutamine amidotransferase family LAGLIDADG_3 PF14528.1 gi|15669613|ref|NP_248426.1| - 1.6e-47 159.5 28.5 6.8e-17 61.4 0.2 7.8 7 0 0 7 7 7 6 LAGLIDADG-like domain Intein_splicing PF14890.1 gi|15669613|ref|NP_248426.1| - 7.3e-39 133.5 22.0 3.6e-13 49.1 0.0 5.0 4 2 0 4 4 4 4 Intein splicing domain Rep_fac_C PF08542.6 gi|15669613|ref|NP_248426.1| - 1.3e-24 85.9 0.1 1.3e-24 85.9 0.1 6.1 5 1 2 7 7 7 1 Replication factor C C-terminal domain HTH_3 PF01381.17 gi|15669613|ref|NP_248426.1| - 2.4e-07 30.5 0.8 6.9e-06 25.8 0.1 3.7 3 0 0 3 3 3 1 Helix-turn-helix RuvB_N PF05496.7 gi|15669613|ref|NP_248426.1| - 7.1e-06 25.2 0.0 3.7e-05 22.8 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus DNA_pol3_delta2 PF13177.1 gi|15669613|ref|NP_248426.1| - 0.00075 19.1 18.5 0.013 15.1 0.2 5.9 5 2 0 5 5 5 2 DNA polymerase III, delta subunit AAA PF00004.24 gi|15669613|ref|NP_248426.1| - 0.0062 16.7 3.1 1.5 8.9 0.0 4.2 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) Hint PF01079.15 gi|15669613|ref|NP_248426.1| - 0.0072 15.5 0.0 0.57 9.3 0.0 2.6 2 0 0 2 2 2 1 Hint module HTH_19 PF12844.2 gi|15669613|ref|NP_248426.1| - 0.023 14.7 0.3 0.023 14.7 0.2 5.4 7 0 0 7 7 7 0 Helix-turn-helix domain AAA_16 PF13191.1 gi|15669613|ref|NP_248426.1| - 0.15 12.0 0.0 0.82 9.6 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Oxidored_nitro PF00148.14 gi|15669614|ref|NP_248427.1| - 1.4e-15 56.8 0.0 2.4e-15 56.1 0.0 1.4 2 0 0 2 2 2 1 Nitrogenase component 1 type Oxidoreductase Nit_Regul_Hom PF10126.4 gi|15669614|ref|NP_248427.1| - 0.09 12.5 0.3 4.8 7.0 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII SHOCT PF09851.4 gi|15669614|ref|NP_248427.1| - 1.9 8.0 7.9 0.44 10.1 0.3 3.0 3 0 0 3 3 3 0 Short C-terminal domain tRNA_int_endo PF01974.12 gi|15669615|ref|NP_248428.1| - 6.3e-30 102.8 0.5 1.2e-29 101.9 0.3 1.5 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|15669615|ref|NP_248428.1| - 3.6e-19 68.0 0.2 7.5e-19 67.0 0.1 1.6 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain Sen15 PF09631.5 gi|15669615|ref|NP_248428.1| - 0.00095 19.3 0.0 0.002 18.3 0.0 1.6 1 0 0 1 1 1 1 Sen15 protein tRNA_int_end_N2 PF12928.2 gi|15669615|ref|NP_248428.1| - 0.06 12.8 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 tRNA-splicing endonuclease subunit sen54 N-term Ldh_2 PF02615.9 gi|15669616|ref|NP_248429.1| - 2.7e-147 489.8 0.4 3e-147 489.7 0.2 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Ribosomal_S3_C PF00189.15 gi|15669616|ref|NP_248429.1| - 0.059 13.5 0.5 0.69 10.1 0.0 2.6 3 0 0 3 3 3 0 Ribosomal protein S3, C-terminal domain CBS PF00571.23 gi|15669617|ref|NP_248430.1| - 4.6e-37 125.5 7.1 1.7e-20 72.5 0.9 2.3 2 0 0 2 2 2 2 CBS domain PRC PF05239.11 gi|15669617|ref|NP_248430.1| - 0.0014 18.4 1.7 0.5 10.2 0.0 2.6 2 0 0 2 2 2 2 PRC-barrel domain Trypsin_2 PF13365.1 gi|15669617|ref|NP_248430.1| - 0.004 17.1 0.1 0.087 12.8 0.0 2.3 2 0 0 2 2 2 1 Trypsin-like peptidase domain DUF3659 PF12396.3 gi|15669617|ref|NP_248430.1| - 0.0071 15.9 0.8 0.65 9.7 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3659) Cache_3 PF14827.1 gi|15669617|ref|NP_248430.1| - 0.028 14.2 0.4 7.1 6.5 0.0 2.4 2 1 0 2 2 2 0 Sensory domain of two-component sensor kinase Peptidase_S32 PF05579.8 gi|15669617|ref|NP_248430.1| - 0.053 12.4 0.0 0.7 8.8 0.0 2.0 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 Peptidase_S7 PF00949.16 gi|15669617|ref|NP_248430.1| - 0.084 12.2 0.0 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease PP2C_C PF07830.8 gi|15669617|ref|NP_248430.1| - 0.092 12.8 1.1 4.7 7.3 0.2 2.3 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain Peptidase_S46 PF10459.4 gi|15669617|ref|NP_248430.1| - 0.099 11.0 0.4 0.34 9.2 0.0 1.9 2 0 0 2 2 2 0 Peptidase S46 DUF643 PF04867.7 gi|15669617|ref|NP_248430.1| - 4.5 7.7 5.9 1.3 9.4 0.7 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF643) GHMP_kinases_N PF00288.21 gi|15669618|ref|NP_248431.1| - 4.4e-06 26.6 0.3 8.1e-06 25.8 0.2 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|15669618|ref|NP_248431.1| - 0.0013 18.9 0.0 0.0027 17.8 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal YqeY PF09424.5 gi|15669618|ref|NP_248431.1| - 0.027 14.2 0.1 0.045 13.6 0.1 1.3 1 0 0 1 1 1 0 Yqey-like protein ODC_AZ PF02100.12 gi|15669618|ref|NP_248431.1| - 0.056 12.9 0.0 0.099 12.1 0.0 1.4 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Nop16 PF09420.5 gi|15669618|ref|NP_248431.1| - 0.089 12.8 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 TPR_11 PF13414.1 gi|15669619|ref|NP_248432.1| - 1.6e-53 178.2 35.4 1.4e-14 53.4 2.0 6.8 5 2 0 6 6 6 6 TPR repeat TPR_2 PF07719.12 gi|15669619|ref|NP_248432.1| - 2e-50 164.6 38.6 2.7e-07 29.9 0.1 11.8 11 1 1 12 12 12 10 Tetratricopeptide repeat TPR_1 PF00515.23 gi|15669619|ref|NP_248432.1| - 7.4e-48 158.2 48.0 3.2e-08 32.8 0.2 11.5 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_16 PF13432.1 gi|15669619|ref|NP_248432.1| - 5.4e-35 119.3 0.1 9.2e-07 29.3 0.0 6.4 4 1 1 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|15669619|ref|NP_248432.1| - 6.1e-35 116.3 63.7 2.3e-05 23.8 0.7 12.0 9 3 2 11 11 11 10 Tetratricopeptide repeat TPR_19 PF14559.1 gi|15669619|ref|NP_248432.1| - 2.4e-30 104.6 10.4 3.3e-07 30.5 0.1 6.6 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|15669619|ref|NP_248432.1| - 1.8e-28 98.2 33.1 0.00011 22.0 2.0 9.2 5 4 4 9 9 9 7 Tetratricopeptide repeat TPR_14 PF13428.1 gi|15669619|ref|NP_248432.1| - 5.3e-25 85.6 0.0 0.025 15.1 0.0 10.1 4 3 7 11 11 10 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|15669619|ref|NP_248432.1| - 2.5e-23 82.0 33.9 9.9e-08 32.0 0.2 6.7 2 1 5 7 7 7 7 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.1 gi|15669619|ref|NP_248432.1| - 6.7e-23 78.9 28.3 7.7e-06 25.7 0.5 9.3 8 1 1 9 9 8 5 Tetratricopeptide repeat TPR_6 PF13174.1 gi|15669619|ref|NP_248432.1| - 1.8e-18 65.6 20.9 0.0013 19.0 0.0 10.2 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|15669619|ref|NP_248432.1| - 1.8e-13 49.2 12.9 0.14 12.0 0.0 9.4 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_15 PF13429.1 gi|15669619|ref|NP_248432.1| - 1e-12 47.7 8.3 1.3e-06 27.7 0.1 4.6 2 2 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|15669619|ref|NP_248432.1| - 1.4e-12 47.2 0.0 0.033 14.0 0.0 6.1 5 3 3 8 8 8 4 Tetratricopeptide repeat NARP1 PF12569.3 gi|15669619|ref|NP_248432.1| - 2.5e-12 46.3 14.0 0.00019 20.3 1.6 4.4 3 1 1 4 4 4 4 NMDA receptor-regulated protein 1 TPR_21 PF09976.4 gi|15669619|ref|NP_248432.1| - 4.3e-12 46.1 3.4 0.0002 21.3 0.1 5.7 3 1 3 6 6 6 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|15669619|ref|NP_248432.1| - 3.3e-09 36.4 24.0 0.00052 19.8 0.4 7.7 7 0 0 7 7 7 2 Fis1 C-terminal tetratricopeptide repeat TPR_20 PF14561.1 gi|15669619|ref|NP_248432.1| - 2.1e-07 30.9 0.3 4.9 7.3 0.0 5.1 4 1 1 5 5 5 1 Tetratricopeptide repeat Apc5 PF12862.2 gi|15669619|ref|NP_248432.1| - 1.2e-06 28.2 1.6 0.3 10.9 0.0 5.4 4 1 0 4 4 4 1 Anaphase-promoting complex subunit 5 TPR_10 PF13374.1 gi|15669619|ref|NP_248432.1| - 1.4e-05 24.8 4.0 7.9 6.5 0.0 6.1 6 0 0 6 6 6 0 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|15669619|ref|NP_248432.1| - 0.00087 19.0 0.9 10 6.0 0.0 4.7 4 0 0 4 4 4 0 Rapsyn N-terminal myristoylation and linker region DUF627 PF04781.7 gi|15669619|ref|NP_248432.1| - 0.0017 17.9 10.8 2.3 7.8 0.3 5.7 3 1 1 4 4 4 1 Protein of unknown function (DUF627) DUF247 PF03140.10 gi|15669619|ref|NP_248432.1| - 0.0059 15.6 0.0 0.012 14.6 0.0 1.4 1 0 0 1 1 1 1 Plant protein of unknown function DUF3856 PF12968.2 gi|15669619|ref|NP_248432.1| - 0.013 15.2 5.8 6 6.6 0.9 5.8 3 3 0 3 3 3 0 Domain of Unknown Function (DUF3856) SHNi-TPR PF10516.4 gi|15669619|ref|NP_248432.1| - 0.065 12.4 0.9 0.84 8.9 0.0 3.4 3 0 0 3 3 3 0 SHNi-TPR TPR_3 PF07720.7 gi|15669619|ref|NP_248432.1| - 0.085 12.6 0.5 0.085 12.6 0.3 8.9 10 0 0 10 10 9 0 Tetratricopeptide repeat MIT PF04212.13 gi|15669619|ref|NP_248432.1| - 0.15 11.9 27.6 15 5.5 0.0 8.6 7 3 1 8 8 8 0 MIT (microtubule interacting and transport) domain DUF87 PF01935.12 gi|15669620|ref|NP_248433.1| - 1.2e-48 165.9 0.3 2e-48 165.2 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|15669620|ref|NP_248433.1| - 1.1e-19 71.0 0.0 2.5e-19 69.8 0.0 1.6 1 1 0 1 1 1 1 AAA-like domain DUF853 PF05872.7 gi|15669620|ref|NP_248433.1| - 1.2e-07 30.4 0.1 0.00022 19.7 0.0 2.3 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.4 gi|15669620|ref|NP_248433.1| - 1.4e-07 30.4 0.0 1.6e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain HAS-barrel PF09378.5 gi|15669620|ref|NP_248433.1| - 1.6e-05 24.6 4.6 1.6e-05 24.6 3.2 2.3 2 0 0 2 2 2 1 HAS barrel domain Zot PF05707.7 gi|15669620|ref|NP_248433.1| - 0.0018 17.7 0.0 0.004 16.6 0.0 1.5 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) FtsK_SpoIIIE PF01580.13 gi|15669620|ref|NP_248433.1| - 0.011 15.2 0.0 0.034 13.6 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family CbiA PF01656.18 gi|15669620|ref|NP_248433.1| - 0.11 11.8 0.0 0.11 11.8 0.0 1.9 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PRA-CH PF01502.13 gi|15669621|ref|NP_248434.1| - 1.1e-35 121.1 0.3 1.6e-35 120.5 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase BBS2_Mid PF14783.1 gi|15669621|ref|NP_248434.1| - 0.038 13.7 0.1 0.064 13.0 0.1 1.4 1 1 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region Radical_SAM PF04055.16 gi|15669622|ref|NP_248435.1| - 6.6e-18 65.4 0.8 9e-17 61.7 0.3 2.1 2 0 0 2 2 2 1 Radical SAM superfamily SinI PF08671.5 gi|15669622|ref|NP_248435.1| - 0.02 14.3 0.7 0.11 11.8 0.0 2.7 3 0 0 3 3 3 0 Anti-repressor SinI PASTA PF03793.14 gi|15669622|ref|NP_248435.1| - 0.078 12.6 0.1 2.9 7.5 0.0 2.7 3 0 0 3 3 3 0 PASTA domain PUA PF01472.15 gi|15669623|ref|NP_248436.1| - 2.1e-24 85.0 2.6 2.1e-24 85.0 1.8 1.7 2 0 0 2 2 2 1 PUA domain DUF1947 PF09183.5 gi|15669623|ref|NP_248436.1| - 0.0015 18.2 3.2 0.0051 16.5 2.2 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF1947) MFS_2 PF13347.1 gi|15669624|ref|NP_248437.1| - 0.025 13.0 0.6 0.034 12.5 0.4 1.1 1 0 0 1 1 1 0 MFS/sugar transport protein DUF3981 PF13139.1 gi|15669624|ref|NP_248437.1| - 0.29 11.1 3.9 0.5 10.3 2.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) HhH-GPD PF00730.20 gi|15669625|ref|NP_248438.1| - 4.9e-21 75.0 0.0 8.4e-21 74.2 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|15669625|ref|NP_248438.1| - 3.7e-05 23.1 0.0 0.00011 21.7 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|15669625|ref|NP_248438.1| - 0.0094 16.1 0.5 0.022 14.9 0.3 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|15669625|ref|NP_248438.1| - 0.042 13.7 0.0 0.16 11.8 0.0 2.0 1 1 0 1 1 1 0 Helix-hairpin-helix motif FF PF01846.14 gi|15669625|ref|NP_248438.1| - 0.067 13.1 0.0 7.3 6.6 0.0 2.7 2 0 0 2 2 2 0 FF domain DUF2972 PF11186.3 gi|15669625|ref|NP_248438.1| - 0.73 9.6 9.6 0.15 11.9 1.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2972) S1 PF00575.18 gi|15669626|ref|NP_248439.1| - 0.031 14.3 0.1 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 S1 RNA binding domain LSM PF01423.17 gi|15669626|ref|NP_248439.1| - 0.034 13.6 0.2 0.051 13.1 0.2 1.5 1 1 0 1 1 1 0 LSM domain Flag1_repress PF03614.8 gi|15669626|ref|NP_248439.1| - 0.051 13.1 0.0 0.051 13.1 0.0 1.1 1 0 0 1 1 1 0 Repressor of phase-1 flagellin Ehbp PF10622.4 gi|15669627|ref|NP_248440.1| - 4.1e-43 145.2 1.4 1e-42 143.9 0.9 1.5 1 1 0 1 1 1 1 Energy-converting hydrogenase B subunit P (EhbP) HAD_2 PF13419.1 gi|15669628|ref|NP_248441.1| - 1e-28 100.7 0.0 1.4e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|15669628|ref|NP_248441.1| - 4e-14 53.5 0.0 9.6e-13 49.0 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|15669628|ref|NP_248441.1| - 2.1e-11 43.3 0.0 4.1e-11 42.4 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|15669628|ref|NP_248441.1| - 1.2e-06 28.8 0.1 1.6e-06 28.4 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|15669628|ref|NP_248441.1| - 0.0056 16.5 0.0 0.36 10.7 0.0 2.4 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase CobS PF02654.10 gi|15669629|ref|NP_248442.1| - 1.1e-88 296.7 11.2 1.3e-88 296.5 7.8 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase SNase PF00565.12 gi|15669630|ref|NP_248443.1| - 1.6e-32 111.9 0.2 2.3e-32 111.4 0.1 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue DUF2729 PF10870.3 gi|15669630|ref|NP_248443.1| - 2.3 8.0 6.2 1.2 8.9 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2729) GHMP_kinases_N PF00288.21 gi|15669631|ref|NP_248444.1| - 5.6e-13 48.7 0.1 1.5e-12 47.4 0.1 1.7 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|15669631|ref|NP_248444.1| - 2.8e-05 24.2 0.0 5e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal CobN-Mg_chel PF02514.11 gi|15669632|ref|NP_248445.1| - 0 1178.0 0.0 0 1177.7 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase 2-Hacid_dh PF00389.25 gi|15669632|ref|NP_248445.1| - 0.021 14.2 0.0 0.079 12.4 0.0 1.9 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DUF4097 PF13349.1 gi|15669633|ref|NP_248446.1| - 0.006 16.1 0.0 0.013 15.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4097) DUF1523 PF07509.6 gi|15669633|ref|NP_248446.1| - 0.008 15.4 0.0 0.014 14.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1523) Tic20 PF09685.5 gi|15669634|ref|NP_248447.1| - 2.3e-16 59.7 4.6 3e-16 59.3 3.2 1.1 1 0 0 1 1 1 1 Tic20-like protein Bax1-I PF01027.15 gi|15669634|ref|NP_248447.1| - 0.39 10.2 8.0 0.74 9.3 5.5 1.4 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF1206 PF06724.6 gi|15669634|ref|NP_248447.1| - 0.86 9.3 4.5 0.52 10.0 1.3 1.9 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) XPG_I PF00867.13 gi|15669635|ref|NP_248448.1| - 3.4e-27 94.3 0.0 8e-27 93.1 0.0 1.7 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.12 gi|15669635|ref|NP_248448.1| - 1.6e-17 63.6 0.0 3e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain UVR PF02151.14 gi|15669635|ref|NP_248448.1| - 0.0011 18.3 11.2 0.0016 17.8 6.6 2.2 1 1 1 2 2 2 1 UvrB/uvrC motif HSCB_C PF07743.8 gi|15669635|ref|NP_248448.1| - 0.041 14.3 5.6 0.051 14.0 0.2 2.8 3 0 0 3 3 3 0 HSCB C-terminal oligomerisation domain Metallophos_2 PF12850.2 gi|15669636|ref|NP_248449.1| - 4.6e-08 33.0 1.9 1.3e-07 31.5 1.3 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|15669636|ref|NP_248449.1| - 1.4e-06 27.9 10.2 4.7e-06 26.1 7.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Ycf34 PF10718.4 gi|15669636|ref|NP_248449.1| - 0.054 13.8 0.2 0.1 12.9 0.2 1.4 1 0 0 1 1 1 0 Hypothetical chloroplast protein Ycf34 NAD_binding_1 PF00175.16 gi|15669637|ref|NP_248450.1| - 7.7e-16 58.6 0.0 1.2e-15 57.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|15669637|ref|NP_248450.1| - 1.7e-14 53.0 9.3 3.4e-14 52.0 6.4 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|15669637|ref|NP_248450.1| - 1.4e-06 28.2 0.0 3.2e-06 27.1 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.7 gi|15669637|ref|NP_248450.1| - 0.0027 17.6 0.0 0.34 10.8 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain Peptidase_M42 PF05343.9 gi|15669637|ref|NP_248450.1| - 0.032 12.9 0.0 0.7 8.6 0.0 2.1 2 0 0 2 2 2 0 M42 glutamyl aminopeptidase Glyco_trans_4_2 PF13477.1 gi|15669637|ref|NP_248450.1| - 0.058 13.2 0.0 0.095 12.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|15669637|ref|NP_248450.1| - 0.17 11.6 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Fae PF08714.6 gi|15669638|ref|NP_248451.1| - 3.6e-36 124.2 0.3 7.9e-36 123.1 0.0 1.7 2 0 0 2 2 2 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.19 gi|15669638|ref|NP_248451.1| - 1.2e-22 80.4 0.1 1.1e-21 77.3 0.1 2.0 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family N6_N4_Mtase PF01555.13 gi|15669639|ref|NP_248452.1| - 1.2e-35 123.1 0.0 9.9e-15 54.6 0.1 3.1 2 1 1 3 3 3 3 DNA methylase Methyltransf_26 PF13659.1 gi|15669639|ref|NP_248452.1| - 3.6e-11 43.1 0.0 9.4e-11 41.7 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|15669639|ref|NP_248452.1| - 1.8e-05 24.3 0.7 0.012 15.2 0.5 2.7 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.13 gi|15669639|ref|NP_248452.1| - 2.2e-05 24.1 0.1 0.0025 17.4 0.0 2.9 3 0 0 3 3 3 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|15669639|ref|NP_248452.1| - 0.14 11.7 2.1 0.22 11.0 0.1 2.4 2 1 0 2 2 2 0 Methyltransferase domain RE_TdeIII PF09520.5 gi|15669640|ref|NP_248453.1| - 1.1e-26 93.7 3.3 1.1e-26 93.7 2.3 2.0 2 1 0 2 2 2 1 Type II restriction endonuclease, TdeIII RE_EcoO109I PF14511.1 gi|15669640|ref|NP_248453.1| - 0.00082 18.8 0.2 0.0033 16.8 0.0 2.1 1 1 1 2 2 2 1 Type II restriction endonuclease EcoO109I Pyr_redox_2 PF07992.9 gi|15669641|ref|NP_248454.1| - 4.4e-07 29.9 1.6 2.2e-05 24.4 1.1 2.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|15669641|ref|NP_248454.1| - 7.8e-05 22.6 0.3 0.00037 20.4 0.2 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|15669641|ref|NP_248454.1| - 0.00024 20.1 0.1 0.0041 16.0 0.1 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|15669641|ref|NP_248454.1| - 0.00034 19.2 0.0 0.59 8.5 0.0 2.5 2 0 0 2 2 2 2 HI0933-like protein Lycopene_cycl PF05834.7 gi|15669641|ref|NP_248454.1| - 0.0035 16.3 0.0 0.0058 15.5 0.0 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_2 PF00890.19 gi|15669641|ref|NP_248454.1| - 0.004 16.0 0.0 0.013 14.3 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain Intron_maturas2 PF01348.16 gi|15669641|ref|NP_248454.1| - 0.0089 16.0 1.0 0.021 14.7 0.7 1.6 1 0 0 1 1 1 1 Type II intron maturase Fer4 PF00037.22 gi|15669641|ref|NP_248454.1| - 0.0092 15.5 1.0 0.017 14.7 0.7 1.4 1 0 0 1 1 1 1 4Fe-4S binding domain FAD_binding_3 PF01494.14 gi|15669641|ref|NP_248454.1| - 0.01 14.9 0.0 0.014 14.4 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain GMC_oxred_C PF05199.8 gi|15669641|ref|NP_248454.1| - 0.011 16.0 0.0 0.034 14.4 0.0 1.8 1 1 0 1 1 1 0 GMC oxidoreductase GMC_oxred_N PF00732.14 gi|15669641|ref|NP_248454.1| - 0.013 14.6 0.1 0.2 10.7 0.0 2.7 2 1 0 2 2 2 0 GMC oxidoreductase TrkA_N PF02254.13 gi|15669641|ref|NP_248454.1| - 0.041 13.8 0.4 0.13 12.2 0.0 2.0 2 1 0 2 2 2 0 TrkA-N domain Fer4_2 PF12797.2 gi|15669641|ref|NP_248454.1| - 0.07 13.0 2.7 0.15 12.0 1.9 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669641|ref|NP_248454.1| - 0.3 11.0 4.2 0.57 10.1 2.9 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain DUF2114 PF09887.4 gi|15669642|ref|NP_248455.1| - 5.6e-231 766.5 3.4 6.7e-231 766.2 2.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) PrmA PF06325.8 gi|15669643|ref|NP_248456.1| - 7.8e-17 61.3 2.0 8.8e-17 61.1 0.8 1.4 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|15669643|ref|NP_248456.1| - 6.3e-14 52.0 0.8 6.3e-14 52.0 0.5 1.7 1 1 1 2 2 2 1 Met-10+ like-protein Methyltransf_31 PF13847.1 gi|15669643|ref|NP_248456.1| - 4e-12 45.9 0.6 5.1e-12 45.6 0.4 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669643|ref|NP_248456.1| - 8.1e-11 42.4 0.0 1.4e-10 41.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15669643|ref|NP_248456.1| - 2e-10 40.6 0.0 3.1e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|15669643|ref|NP_248456.1| - 8.8e-08 31.4 0.1 1.6e-07 30.6 0.0 1.3 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.9 gi|15669643|ref|NP_248456.1| - 9.5e-08 31.6 0.1 1.8e-07 30.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|15669643|ref|NP_248456.1| - 6.7e-06 26.5 0.0 1.2e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PRMT5 PF05185.11 gi|15669643|ref|NP_248456.1| - 7.9e-06 25.0 0.4 1e-05 24.7 0.3 1.1 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_25 PF13649.1 gi|15669643|ref|NP_248456.1| - 2.4e-05 24.6 0.0 3.9e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|15669643|ref|NP_248456.1| - 4.6e-05 22.5 0.1 8.5e-05 21.6 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase PCMT PF01135.14 gi|15669643|ref|NP_248456.1| - 5.3e-05 22.8 0.0 0.00011 21.8 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) tRNA_U5-meth_tr PF05958.6 gi|15669643|ref|NP_248456.1| - 0.00089 18.0 0.1 0.0014 17.4 0.1 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_23 PF13489.1 gi|15669643|ref|NP_248456.1| - 0.0021 17.7 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669643|ref|NP_248456.1| - 0.0022 18.4 0.0 0.004 17.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|15669643|ref|NP_248456.1| - 0.0036 16.4 0.1 0.01 14.9 0.0 1.6 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Cons_hypoth95 PF03602.10 gi|15669643|ref|NP_248456.1| - 0.0036 16.7 0.0 0.0056 16.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.13 gi|15669643|ref|NP_248456.1| - 0.024 14.1 0.1 0.035 13.5 0.0 1.2 1 0 0 1 1 1 0 DNA methylase Methyltransf_15 PF09445.5 gi|15669643|ref|NP_248456.1| - 0.025 14.1 0.1 0.047 13.2 0.1 1.4 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DREV PF05219.7 gi|15669643|ref|NP_248456.1| - 0.025 13.4 0.1 0.031 13.1 0.1 1.2 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_16 PF10294.4 gi|15669643|ref|NP_248456.1| - 0.028 13.9 0.0 0.046 13.1 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase Ubie_methyltran PF01209.13 gi|15669643|ref|NP_248456.1| - 0.068 12.2 0.5 0.12 11.4 0.1 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.1 gi|15669643|ref|NP_248456.1| - 0.1 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF447 PF04289.7 gi|15669644|ref|NP_248457.1| - 7.3e-49 165.7 0.2 8.3e-49 165.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) DHquinase_I PF01487.10 gi|15669645|ref|NP_248458.1| - 6.9e-66 222.0 0.1 7.8e-66 221.9 0.1 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase BBE PF08031.7 gi|15669645|ref|NP_248458.1| - 0.098 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Berberine and berberine like Alpha-amylase PF00128.19 gi|15669646|ref|NP_248459.1| - 0.013 14.9 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Alpha amylase, catalytic domain DUF1128 PF06569.6 gi|15669646|ref|NP_248459.1| - 0.044 13.5 0.1 0.13 11.9 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1128) DHDPS PF00701.17 gi|15669646|ref|NP_248459.1| - 0.099 11.2 0.0 0.19 10.2 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family AP_endonuc_2 PF01261.19 gi|15669646|ref|NP_248459.1| - 0.14 11.3 0.0 0.38 9.9 0.0 1.7 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel Histidinol_dh PF00815.15 gi|15669647|ref|NP_248460.1| - 3e-186 619.0 4.9 3.4e-186 618.8 3.4 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase 3-dmu-9_3-mt PF06983.8 gi|15669647|ref|NP_248460.1| - 0.0027 17.9 0.9 2.4 8.4 0.1 2.4 2 0 0 2 2 2 2 3-demethylubiquinone-9 3-methyltransferase UvrD-helicase PF00580.16 gi|15669647|ref|NP_248460.1| - 0.031 13.5 5.6 1 8.6 0.7 2.3 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain FlgN PF05130.7 gi|15669647|ref|NP_248460.1| - 2.5 8.3 5.2 0.61 10.3 0.4 2.3 2 1 0 2 2 2 0 FlgN protein DUF2076 PF09849.4 gi|15669648|ref|NP_248461.1| - 2.5e-06 27.7 0.0 2.9e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) Zip PF02535.17 gi|15669648|ref|NP_248461.1| - 0.02 13.8 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FtsX PF02687.16 gi|15669648|ref|NP_248461.1| - 0.025 14.3 0.7 7.2 6.3 1.3 2.1 2 0 0 2 2 2 0 FtsX-like permease family MacB_PCD PF12704.2 gi|15669648|ref|NP_248461.1| - 0.036 13.6 1.8 0.056 13.0 1.3 1.4 1 1 0 1 1 1 0 MacB-like periplasmic core domain DUF2627 PF11118.3 gi|15669648|ref|NP_248461.1| - 0.062 13.4 1.0 0.1 12.7 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) DUF3592 PF12158.3 gi|15669648|ref|NP_248461.1| - 0.077 12.7 0.0 0.087 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) 4HB_MCP_1 PF12729.2 gi|15669648|ref|NP_248461.1| - 1.1 8.5 5.8 1.4 8.2 0.2 2.2 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DUF3647 PF12363.3 gi|15669648|ref|NP_248461.1| - 2.5 8.2 6.0 49 4.0 4.3 2.1 1 1 1 2 2 2 0 Phage protein Neurensin PF14927.1 gi|15669648|ref|NP_248461.1| - 3.1 7.1 5.1 5.3 6.4 3.5 1.6 1 1 0 1 1 1 0 Neurensin ACT PF01842.20 gi|15669649|ref|NP_248462.1| - 5.5e-08 32.1 0.0 5.3e-07 28.9 0.0 2.2 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.1 gi|15669649|ref|NP_248462.1| - 0.00081 19.6 0.0 0.0021 18.3 0.0 1.8 2 0 0 2 2 2 1 ACT domain Transketolase_C PF02780.15 gi|15669649|ref|NP_248462.1| - 0.019 14.8 0.4 0.61 10.0 0.0 2.2 1 1 1 2 2 2 0 Transketolase, C-terminal domain TPP_enzyme_M PF00205.17 gi|15669649|ref|NP_248462.1| - 0.03 14.0 0.8 0.2 11.4 0.1 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain Oxidored_nitro PF00148.14 gi|15669649|ref|NP_248462.1| - 0.076 11.6 0.1 6.5 5.2 0.0 2.3 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase PcrB PF01884.12 gi|15669649|ref|NP_248462.1| - 0.088 12.0 2.5 3.8 6.6 0.3 2.3 1 1 1 2 2 2 0 PcrB family Adenine_deam_C PF13382.1 gi|15669650|ref|NP_248463.1| - 3.1e-49 166.4 0.1 7.2e-49 165.2 0.0 1.6 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|15669650|ref|NP_248463.1| - 1.5e-37 130.0 0.1 5.9e-35 121.5 0.0 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|15669650|ref|NP_248463.1| - 3.1e-10 39.7 0.3 1e-09 38.0 0.2 1.9 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|15669650|ref|NP_248463.1| - 4.4e-06 26.9 0.0 0.09 12.7 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 gi|15669650|ref|NP_248463.1| - 0.037 13.2 0.1 0.64 9.1 0.0 2.1 2 0 0 2 2 2 0 Amidohydrolase family V4R PF02830.13 gi|15669651|ref|NP_248464.1| - 2.2e-17 62.6 0.1 3.4e-17 62.0 0.1 1.3 1 0 0 1 1 1 1 V4R domain DUF2507 PF10702.4 gi|15669651|ref|NP_248464.1| - 7.5e-05 22.3 0.0 0.0001 21.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2507) DnaB_2 PF07261.6 gi|15669651|ref|NP_248464.1| - 0.059 12.9 0.1 0.14 11.7 0.1 1.6 1 0 0 1 1 1 0 Replication initiation and membrane attachment Rsbr_N PF08678.5 gi|15669652|ref|NP_248465.1| - 0.014 15.2 2.9 0.019 14.8 0.5 2.0 1 1 1 2 2 2 0 Rsbr N terminal Telomerase_RBD PF12009.3 gi|15669652|ref|NP_248465.1| - 0.032 14.1 0.7 0.049 13.5 0.5 1.3 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain DUF4368 PF14287.1 gi|15669652|ref|NP_248465.1| - 0.1 12.4 1.4 2 8.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4368) RB_A PF01858.12 gi|15669652|ref|NP_248465.1| - 0.13 11.9 2.6 0.12 11.9 0.3 2.0 1 1 1 2 2 2 0 Retinoblastoma-associated protein A domain Complex1_LYR_2 PF13233.1 gi|15669652|ref|NP_248465.1| - 0.56 10.7 2.7 5.4 7.5 2.1 2.3 1 1 1 2 2 2 0 Complex1_LYR-like UPF0128 PF03673.8 gi|15669654|ref|NP_248467.1| - 5.2e-111 369.2 1.9 5.9e-111 369.0 1.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0128) MMR_HSR1 PF01926.18 gi|15669655|ref|NP_248468.1| - 7.1e-22 77.5 5.3 4.7e-17 62.0 0.1 2.9 2 1 1 3 3 3 2 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|15669655|ref|NP_248468.1| - 1.3e-11 44.0 1.7 7.2e-08 31.8 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.18 gi|15669655|ref|NP_248468.1| - 8e-10 38.7 3.4 0.001 18.9 0.1 3.5 2 1 1 3 3 3 3 Dynamin family GTP_EFTU PF00009.22 gi|15669655|ref|NP_248468.1| - 1.8e-07 30.7 3.8 1.4e-05 24.6 0.2 3.8 3 2 0 3 3 3 1 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|15669655|ref|NP_248468.1| - 1.1e-05 25.9 0.7 0.0094 16.4 0.0 3.1 3 0 0 3 3 3 1 Miro-like protein DUF258 PF03193.11 gi|15669655|ref|NP_248468.1| - 2.8e-05 23.3 0.1 5.5e-05 22.3 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AIG1 PF04548.11 gi|15669655|ref|NP_248468.1| - 0.0012 18.0 0.1 0.0058 15.7 0.0 2.2 2 0 0 2 2 2 1 AIG1 family DUF86 PF01934.12 gi|15669655|ref|NP_248468.1| - 0.0039 16.8 0.4 0.5 10.0 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function DUF86 ABC_tran PF00005.22 gi|15669655|ref|NP_248468.1| - 0.0061 16.8 1.2 0.021 15.0 0.8 2.1 1 1 0 1 1 1 1 ABC transporter ArgK PF03308.11 gi|15669655|ref|NP_248468.1| - 0.007 15.1 1.2 0.026 13.3 0.2 2.2 3 0 0 3 3 3 1 ArgK protein PduV-EutP PF10662.4 gi|15669655|ref|NP_248468.1| - 0.04 13.3 0.3 0.66 9.4 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Mrr_cat PF04471.7 gi|15669655|ref|NP_248468.1| - 0.46 10.3 2.8 11 5.8 0.0 2.9 2 1 1 3 3 3 0 Restriction endonuclease AAA_18 PF13238.1 gi|15669655|ref|NP_248468.1| - 0.71 10.1 5.0 1.2 9.4 1.2 3.1 2 1 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|15669655|ref|NP_248468.1| - 0.71 10.7 5.1 1.5 9.6 1.2 3.0 1 1 1 2 2 2 0 AAA domain PALP PF00291.20 gi|15669656|ref|NP_248469.1| - 4.4e-75 252.7 0.2 5.2e-75 252.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACP_syn_III_C PF08541.5 gi|15669656|ref|NP_248469.1| - 0.014 15.3 0.1 0.51 10.3 0.0 2.7 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DDE_Tnp_IS240 PF13610.1 gi|15669657|ref|NP_248470.1| - 2.7e-15 56.5 0.0 4.9e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 DDE domain rve PF00665.21 gi|15669657|ref|NP_248470.1| - 0.00016 21.7 0.0 0.00047 20.2 0.0 1.7 1 1 0 1 1 1 1 Integrase core domain AF0941-like PF14591.1 gi|15669657|ref|NP_248470.1| - 0.12 12.4 1.4 0.18 11.8 1.0 1.4 1 0 0 1 1 1 0 AF0941-like SKN1 PF03935.10 gi|15669658|ref|NP_248471.1| - 0.00042 18.5 0.2 0.00056 18.1 0.2 1.1 1 0 0 1 1 1 1 Beta-glucan synthesis-associated protein (SKN1) Calcyon PF06387.6 gi|15669658|ref|NP_248471.1| - 0.1 11.9 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) PKD PF00801.15 gi|15669659|ref|NP_248472.1| - 2.7e-63 209.6 50.8 9e-15 54.1 0.4 10.0 10 0 0 10 10 10 9 PKD domain ChitinaseA_N PF08329.5 gi|15669659|ref|NP_248472.1| - 0.0067 16.1 0.0 14 5.4 0.0 4.1 4 0 0 4 4 4 2 Chitinase A, N-terminal domain Class_IIIsignal PF04021.7 gi|15669660|ref|NP_248473.1| - 6.1e-09 35.2 2.2 8.7e-09 34.8 1.5 1.2 1 0 0 1 1 1 1 Class III signal peptide Exosortase_EpsH PF09721.5 gi|15669661|ref|NP_248474.1| - 0.00096 18.4 9.4 0.0017 17.6 6.5 1.4 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) DUF2341 PF10102.4 gi|15669662|ref|NP_248475.1| - 5.6e-30 103.3 0.8 5.6e-30 103.3 0.5 4.0 2 1 1 3 3 3 1 Domain of unknown function (DUF2341) DUF3898 PF13037.1 gi|15669663|ref|NP_248476.1| - 0.14 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) DUF2341 PF10102.4 gi|15669664|ref|NP_248477.1| - 1.6e-17 63.4 3.8 1.6e-17 63.4 2.7 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF2341) Meth_synt_2 PF01717.13 gi|15669665|ref|NP_248478.1| - 1.9e-97 326.1 0.9 2.1e-97 325.9 0.7 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|15669665|ref|NP_248478.1| - 4.9e-10 39.1 0.5 2.1e-09 37.0 0.1 1.8 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.12 gi|15669665|ref|NP_248478.1| - 0.0054 15.7 1.1 0.029 13.3 0.3 2.3 2 1 0 2 2 2 1 Uroporphyrinogen decarboxylase (URO-D) TK PF00265.13 gi|15669665|ref|NP_248478.1| - 0.033 13.7 0.6 0.063 12.8 0.1 1.7 1 1 0 2 2 2 0 Thymidine kinase PIN PF01850.16 gi|15669666|ref|NP_248479.1| - 4.5e-06 26.9 0.0 9.2e-06 25.9 0.0 1.5 1 1 0 1 1 1 1 PIN domain UPF0278 PF08745.6 gi|15669666|ref|NP_248479.1| - 0.00015 21.0 0.1 0.00032 20.0 0.1 1.6 1 1 0 1 1 1 1 UPF0278 family PIN_2 PF10130.4 gi|15669666|ref|NP_248479.1| - 0.00043 20.3 0.0 0.00063 19.7 0.0 1.3 1 0 0 1 1 1 1 PIN domain ADK_lid PF05191.9 gi|15669666|ref|NP_248479.1| - 0.014 15.0 2.5 0.024 14.2 0.9 2.0 2 0 0 2 2 2 0 Adenylate kinase, active site lid Nudix_N_2 PF14803.1 gi|15669666|ref|NP_248479.1| - 0.083 12.5 0.3 11 5.8 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal Sigma70_r4_2 PF08281.7 gi|15669667|ref|NP_248480.1| - 6.4e-06 25.5 0.1 1.3e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.14 gi|15669667|ref|NP_248480.1| - 0.0034 16.6 0.2 0.0034 16.6 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_24 PF13412.1 gi|15669667|ref|NP_248480.1| - 0.0049 16.2 0.1 0.016 14.5 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|15669667|ref|NP_248480.1| - 0.023 14.3 0.0 0.053 13.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain DNA_pol3_delta PF06144.8 gi|15669667|ref|NP_248480.1| - 0.14 11.6 4.8 0.2 11.1 0.3 2.1 1 1 1 2 2 2 0 DNA polymerase III, delta subunit PNPase PF03726.9 gi|15669667|ref|NP_248480.1| - 0.36 11.1 5.6 0.1 12.9 0.6 2.1 2 1 0 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain SpoU_methylase PF00588.14 gi|15669668|ref|NP_248481.1| - 2.5e-37 127.8 0.0 4.1e-37 127.1 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family DUF1027 PF06265.6 gi|15669668|ref|NP_248481.1| - 0.072 12.9 0.3 0.46 10.3 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1027) Glyco_hydro_114 PF03537.8 gi|15669669|ref|NP_248482.1| - 3.8e-19 68.2 0.3 9.5e-19 66.9 0.1 1.8 2 0 0 2 2 2 1 Glycoside-hydrolase family GH114 Flavodoxin_NdrI PF07972.6 gi|15669669|ref|NP_248482.1| - 0.039 13.8 0.5 1.4 8.8 0.0 2.8 3 0 0 3 3 3 0 NrdI Flavodoxin like ATP_bind_3 PF01171.15 gi|15669670|ref|NP_248483.1| - 3.5e-12 46.1 0.0 1.5e-11 44.0 0.0 1.9 1 1 1 2 2 2 1 PP-loop family ThiI PF02568.9 gi|15669670|ref|NP_248483.1| - 2.3e-06 27.2 0.0 3.7e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.11 gi|15669670|ref|NP_248483.1| - 1.4e-05 23.8 0.0 3.9e-05 22.3 0.0 1.8 1 1 0 1 1 1 1 tRNA methyl transferase QueC PF06508.8 gi|15669670|ref|NP_248483.1| - 3.9e-05 23.0 0.1 0.00012 21.4 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 gi|15669670|ref|NP_248483.1| - 0.00029 19.7 0.0 0.00054 18.9 0.0 1.4 1 0 0 1 1 1 1 NAD synthase PAPS_reduct PF01507.14 gi|15669670|ref|NP_248483.1| - 0.00058 19.7 0.0 0.0016 18.2 0.0 1.9 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Rhodanese PF00581.15 gi|15669670|ref|NP_248483.1| - 0.013 15.8 0.1 0.031 14.6 0.1 1.6 1 0 0 1 1 1 0 Rhodanese-like domain Asn_synthase PF00733.16 gi|15669670|ref|NP_248483.1| - 0.032 13.7 0.0 0.056 12.9 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase RecR PF02132.10 gi|15669670|ref|NP_248483.1| - 0.052 12.9 5.4 0.24 10.8 1.1 2.6 2 0 0 2 2 2 0 RecR protein Zn_Tnp_IS1595 PF12760.2 gi|15669670|ref|NP_248483.1| - 5.9 6.7 11.8 1 9.2 0.4 3.7 3 1 0 3 3 3 0 Transposase zinc-ribbon domain Aminotran_1_2 PF00155.16 gi|15669671|ref|NP_248484.1| - 1.2e-36 126.4 0.0 1.6e-36 125.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|15669671|ref|NP_248484.1| - 0.0038 16.4 0.0 0.0062 15.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_MocR PF12897.2 gi|15669671|ref|NP_248484.1| - 0.0042 15.6 0.0 0.0091 14.6 0.0 1.5 2 0 0 2 2 2 1 Alanine-glyoxylate amino-transferase CxxCxxCC PF03692.10 gi|15669672|ref|NP_248485.1| - 0.0024 18.3 10.7 0.3 11.6 7.4 2.3 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Saccharop_dh_N PF04455.7 gi|15669673|ref|NP_248486.1| - 1.2e-40 137.7 0.0 2.5e-40 136.7 0.0 1.6 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region TPP_enzyme_M PF00205.17 gi|15669673|ref|NP_248486.1| - 0.023 14.4 0.0 0.075 12.7 0.0 1.9 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Shikimate_DH PF01488.15 gi|15669673|ref|NP_248486.1| - 0.037 14.1 0.2 0.15 12.1 0.0 1.9 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF2100 PF09873.4 gi|15669674|ref|NP_248487.1| - 1.5e-92 308.8 18.1 1.7e-92 308.7 12.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2100) DUF1828 PF08861.5 gi|15669674|ref|NP_248487.1| - 0.077 12.6 0.7 2.4 7.8 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function DUF1828 Ribosomal_L4 PF00573.17 gi|15669674|ref|NP_248487.1| - 3.6 6.9 5.5 5.6 6.2 2.2 2.3 1 1 0 2 2 2 0 Ribosomal protein L4/L1 family AAA_18 PF13238.1 gi|15669675|ref|NP_248488.1| - 8.7e-13 48.7 0.1 1.6e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|15669675|ref|NP_248488.1| - 9.6e-09 36.0 1.6 1e-08 36.0 0.1 1.9 2 1 0 2 2 2 1 AAA domain ATP-cone PF03477.11 gi|15669675|ref|NP_248488.1| - 8.4e-08 32.5 1.4 4.2e-07 30.2 0.1 2.3 2 0 0 2 2 2 1 ATP cone domain Zeta_toxin PF06414.7 gi|15669675|ref|NP_248488.1| - 1.4e-05 24.2 0.1 6.1e-05 22.2 0.0 1.9 2 1 0 2 2 2 1 Zeta toxin Cytidylate_kin2 PF13189.1 gi|15669675|ref|NP_248488.1| - 0.0091 15.9 0.0 0.0091 15.9 0.0 2.6 3 0 0 3 3 3 1 Cytidylate kinase-like family AAA_28 PF13521.1 gi|15669675|ref|NP_248488.1| - 0.026 14.4 0.0 0.091 12.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|15669675|ref|NP_248488.1| - 0.034 14.0 0.0 0.11 12.3 0.0 2.0 2 1 0 2 2 2 0 AAA domain PRESAN PF09687.5 gi|15669675|ref|NP_248488.1| - 0.077 13.0 0.7 0.077 13.0 0.5 2.4 3 0 0 3 3 3 0 Plasmodium RESA N-terminal DUF2633 PF11119.3 gi|15669676|ref|NP_248489.1| - 0.62 9.8 2.8 1.1 9.0 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) TrkH PF02386.11 gi|15669678|ref|NP_248491.1| - 6.4e-62 209.1 40.6 6.8e-62 209.0 20.5 3.1 2 2 0 2 2 2 2 Cation transport protein ATP-grasp PF02222.17 gi|15669679|ref|NP_248492.1| - 8.7e-62 207.4 0.0 1.5e-61 206.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|15669679|ref|NP_248492.1| - 4.1e-21 75.5 0.1 1.3e-20 73.9 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|15669679|ref|NP_248492.1| - 3.4e-12 46.1 0.0 1.5e-11 44.0 0.0 2.1 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.1 gi|15669679|ref|NP_248492.1| - 2.7e-09 36.2 0.0 1.1e-07 30.9 0.0 2.2 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon RimK PF08443.6 gi|15669679|ref|NP_248492.1| - 1.3e-08 34.5 0.0 4e-08 32.9 0.0 1.8 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.14 gi|15669679|ref|NP_248492.1| - 6.4e-08 32.3 0.1 3.3e-07 30.0 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPSase_L_D2 PF02786.12 gi|15669679|ref|NP_248492.1| - 7.4e-08 31.9 0.1 1.8e-07 30.7 0.0 1.7 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.9 gi|15669679|ref|NP_248492.1| - 1.3e-07 31.5 0.1 8.9e-07 28.9 0.0 2.3 1 1 1 2 2 2 1 ATP-grasp domain CPSase_L_chain PF00289.17 gi|15669679|ref|NP_248492.1| - 0.00022 21.2 0.1 0.00062 19.8 0.1 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain 2-Hacid_dh_C PF02826.14 gi|15669679|ref|NP_248492.1| - 0.0061 15.7 0.3 0.013 14.6 0.0 1.8 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YHYH PF14240.1 gi|15669679|ref|NP_248492.1| - 0.046 13.3 0.0 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 YHYH protein Epimerase PF01370.16 gi|15669679|ref|NP_248492.1| - 0.047 13.1 0.0 0.088 12.2 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family ATPgrasp_ST PF14397.1 gi|15669679|ref|NP_248492.1| - 0.12 11.4 0.0 0.37 9.8 0.0 1.7 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Radical_SAM PF04055.16 gi|15669680|ref|NP_248493.1| - 3.2e-28 98.9 1.6 4.4e-28 98.5 0.4 1.8 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|15669680|ref|NP_248493.1| - 6.9e-16 58.2 0.0 3.3e-15 56.0 0.0 2.1 2 0 0 2 2 2 1 B12 binding domain Surf_Ag_VNR PF07244.10 gi|15669680|ref|NP_248493.1| - 0.00035 20.9 0.0 0.0018 18.6 0.0 2.2 1 0 0 1 1 1 1 Surface antigen variable number repeat AP_endonuc_2 PF01261.19 gi|15669680|ref|NP_248493.1| - 0.0075 15.5 0.0 0.13 11.5 0.0 2.5 2 1 1 3 3 3 1 Xylose isomerase-like TIM barrel NAD_binding_8 PF13450.1 gi|15669681|ref|NP_248494.1| - 1.3e-10 41.0 0.3 7.4e-10 38.7 0.3 2.1 1 1 1 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|15669681|ref|NP_248494.1| - 0.061 12.1 0.2 0.12 11.2 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.14 gi|15669681|ref|NP_248494.1| - 0.085 11.8 0.3 0.17 10.8 0.2 1.5 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.22 gi|15669681|ref|NP_248494.1| - 0.087 13.2 1.9 18 5.8 0.2 3.3 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase MCM PF00493.18 gi|15669682|ref|NP_248495.1| - 2e-107 358.8 2.9 3.1e-107 358.1 2.0 1.3 1 0 0 1 1 1 1 MCM2/3/5 family Mg_chelatase PF01078.16 gi|15669682|ref|NP_248495.1| - 6.9e-09 35.1 0.1 2.3e-06 26.9 0.0 2.8 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM_N PF14551.1 gi|15669682|ref|NP_248495.1| - 2.1e-08 34.7 0.5 2.1e-08 34.7 0.4 3.3 3 1 0 3 3 3 1 MCM N-terminal domain AAA_5 PF07728.9 gi|15669682|ref|NP_248495.1| - 4.6e-06 26.3 0.0 2.7e-05 23.9 0.0 2.3 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) Cas_NE0113 PF09623.5 gi|15669682|ref|NP_248495.1| - 0.0011 18.4 0.6 0.0026 17.2 0.4 1.6 1 0 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) AAA_3 PF07726.6 gi|15669682|ref|NP_248495.1| - 0.0013 18.3 0.0 0.0033 17.0 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|15669682|ref|NP_248495.1| - 0.0021 17.5 0.0 0.078 12.4 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain Imm31 PF15595.1 gi|15669682|ref|NP_248495.1| - 0.0022 17.7 0.2 0.0083 15.8 0.1 2.1 1 1 0 1 1 1 1 Immunity protein 31 A2L_zn_ribbon PF08792.5 gi|15669682|ref|NP_248495.1| - 0.16 11.4 0.6 1 8.8 0.0 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Sgf11 PF08209.6 gi|15669682|ref|NP_248495.1| - 0.23 10.8 0.3 0.39 10.0 0.2 1.4 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) FYDLN_acid PF09538.5 gi|15669682|ref|NP_248495.1| - 4.1 8.0 8.1 46 4.6 0.0 3.2 2 1 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Cation_ATPase_C PF00689.16 gi|15669683|ref|NP_248496.1| - 2.1 7.8 10.5 2.6 7.5 7.3 1.2 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus FtsX PF02687.16 gi|15669683|ref|NP_248496.1| - 7 6.4 12.6 49 3.7 8.7 2.0 1 1 0 1 1 1 0 FtsX-like permease family Amidohydro_1 PF01979.15 gi|15669684|ref|NP_248497.1| - 2.2e-18 67.0 1.9 1.4e-17 64.3 1.3 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|15669684|ref|NP_248497.1| - 6e-11 42.0 0.0 2.4e-10 40.0 0.0 2.2 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|15669684|ref|NP_248497.1| - 6.5e-09 36.2 0.0 0.00061 19.9 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 gi|15669684|ref|NP_248497.1| - 0.03 13.5 0.0 5.9 6.0 0.0 2.3 2 0 0 2 2 2 0 Amidohydrolase family DUF2207 PF09972.4 gi|15669685|ref|NP_248498.1| - 1.5 7.2 6.5 1.6 7.2 4.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4199 PF13858.1 gi|15669685|ref|NP_248498.1| - 7.6 6.4 17.5 5.4 6.9 2.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF2085 PF09858.4 gi|15669686|ref|NP_248499.1| - 2.6e-37 126.7 1.7 2.6e-37 126.7 1.2 1.8 2 0 0 2 2 2 1 Predicted membrane protein (DUF2085) Rhomboid PF01694.17 gi|15669686|ref|NP_248499.1| - 2.2 8.3 10.3 21 5.1 7.2 2.2 1 1 0 1 1 1 0 Rhomboid family SWIM PF04434.12 gi|15669687|ref|NP_248500.1| - 3.4e-06 26.4 0.8 5.8e-06 25.6 0.5 1.4 1 0 0 1 1 1 1 SWIM zinc finger Cas_Cas02710 PF09670.5 gi|15669687|ref|NP_248500.1| - 2.3e-05 23.2 1.0 4.1e-05 22.3 0.7 1.5 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) DUF2222 PF09984.4 gi|15669687|ref|NP_248500.1| - 0.013 14.9 0.1 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized signal transduction histidine kinase domain (DUF2222) AAA PF00004.24 gi|15669688|ref|NP_248501.1| - 7.3e-41 139.4 0.0 1.7e-40 138.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|15669688|ref|NP_248501.1| - 3.6e-11 42.5 0.0 3.4e-10 39.3 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_2 PF07724.9 gi|15669688|ref|NP_248501.1| - 2.2e-09 37.4 0.0 4.3e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) TIP49 PF06068.8 gi|15669688|ref|NP_248501.1| - 6.7e-07 28.3 0.0 1e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 TIP49 C-terminus DUF815 PF05673.8 gi|15669688|ref|NP_248501.1| - 1.4e-06 27.4 0.0 8.6e-05 21.5 0.0 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF815) AAA_5 PF07728.9 gi|15669688|ref|NP_248501.1| - 4.5e-06 26.4 0.0 2.9e-05 23.8 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|15669688|ref|NP_248501.1| - 1.2e-05 25.5 0.0 0.0003 20.9 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|15669688|ref|NP_248501.1| - 1.7e-05 24.8 0.0 0.00015 21.8 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.12 gi|15669688|ref|NP_248501.1| - 6.2e-05 22.4 0.0 0.0001 21.7 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_17 PF13207.1 gi|15669688|ref|NP_248501.1| - 0.00022 22.0 0.1 0.00087 20.0 0.0 2.3 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.1 gi|15669688|ref|NP_248501.1| - 0.00023 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|15669688|ref|NP_248501.1| - 0.00067 18.8 0.0 0.0016 17.6 0.0 1.6 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.1 gi|15669688|ref|NP_248501.1| - 0.0015 18.4 0.0 0.0031 17.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Bac_DnaA PF00308.13 gi|15669688|ref|NP_248501.1| - 0.0024 17.5 0.0 0.0046 16.6 0.0 1.5 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_18 PF13238.1 gi|15669688|ref|NP_248501.1| - 0.0024 18.1 0.0 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|15669688|ref|NP_248501.1| - 0.0046 16.3 0.2 0.095 12.0 0.0 2.2 1 1 1 2 2 2 1 AAA domain RNA_helicase PF00910.17 gi|15669688|ref|NP_248501.1| - 0.0051 16.9 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 RNA helicase KaiC PF06745.8 gi|15669688|ref|NP_248501.1| - 0.012 14.7 0.1 0.61 9.1 0.0 2.5 1 1 2 3 3 3 0 KaiC Parvo_NS1 PF01057.12 gi|15669688|ref|NP_248501.1| - 0.012 14.4 0.0 0.02 13.7 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.7 gi|15669688|ref|NP_248501.1| - 0.013 14.6 0.0 0.02 13.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.1 gi|15669688|ref|NP_248501.1| - 0.016 15.2 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.1 gi|15669688|ref|NP_248501.1| - 0.017 15.2 0.0 0.049 13.6 0.0 1.7 2 1 0 2 2 1 0 Sigma-54 interaction domain AAA_24 PF13479.1 gi|15669688|ref|NP_248501.1| - 0.02 14.4 0.0 0.035 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain DNA_pol3_delta2 PF13177.1 gi|15669688|ref|NP_248501.1| - 0.023 14.3 0.3 11 5.6 0.0 3.2 2 2 1 3 3 3 0 DNA polymerase III, delta subunit PhoH PF02562.11 gi|15669688|ref|NP_248501.1| - 0.024 13.8 0.0 0.042 13.0 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_19 PF13245.1 gi|15669688|ref|NP_248501.1| - 0.05 13.3 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain Sigma54_activat PF00158.21 gi|15669688|ref|NP_248501.1| - 0.052 13.0 0.0 0.14 11.6 0.0 1.8 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_3 PF07726.6 gi|15669688|ref|NP_248501.1| - 0.069 12.7 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ResIII PF04851.10 gi|15669688|ref|NP_248501.1| - 0.089 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit SDH_sah PF01972.11 gi|15669689|ref|NP_248502.1| - 1.3e-161 536.0 3.1 1.5e-161 535.8 2.2 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.18 gi|15669689|ref|NP_248502.1| - 3.3e-08 33.4 2.1 2.1e-07 30.7 1.5 2.0 1 1 0 1 1 1 1 Clp protease ECH PF00378.15 gi|15669689|ref|NP_248502.1| - 0.0002 20.5 0.1 0.00046 19.3 0.1 1.6 1 1 1 2 2 2 1 Enoyl-CoA hydratase/isomerase family Peptidase_S49 PF01343.13 gi|15669689|ref|NP_248502.1| - 0.00066 19.4 0.1 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 Glyco_transf_5 PF08323.6 gi|15669689|ref|NP_248502.1| - 0.029 13.8 0.0 0.044 13.2 0.0 1.4 1 0 0 1 1 1 0 Starch synthase catalytic domain DUF192 PF02643.10 gi|15669690|ref|NP_248503.1| - 8.7e-18 63.9 0.1 1e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Peptidase_M20 PF01546.23 gi|15669691|ref|NP_248504.1| - 1.4e-19 70.3 0.0 1.9e-19 69.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|15669691|ref|NP_248504.1| - 7e-14 51.5 0.0 1.3e-13 50.6 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain DUF3199 PF11436.3 gi|15669691|ref|NP_248504.1| - 0.014 15.1 0.2 0.034 14.0 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) N6_N4_Mtase PF01555.13 gi|15669692|ref|NP_248505.1| - 2.2e-55 187.6 1.0 2.9e-55 187.2 0.7 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|15669692|ref|NP_248505.1| - 1.4e-13 50.8 0.0 2.2e-05 24.4 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|15669692|ref|NP_248505.1| - 5.5e-08 32.5 0.0 0.0018 17.8 0.0 2.3 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.5 gi|15669692|ref|NP_248505.1| - 0.00018 21.1 0.1 0.097 12.2 0.0 2.4 2 0 0 2 2 2 2 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.7 gi|15669692|ref|NP_248505.1| - 0.00022 21.6 0.0 0.11 12.9 0.0 3.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|15669692|ref|NP_248505.1| - 0.0026 17.3 0.4 0.21 11.1 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669692|ref|NP_248505.1| - 0.033 13.5 0.0 0.45 9.8 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical protein 95 VPR PF00522.13 gi|15669692|ref|NP_248505.1| - 0.051 13.4 0.1 0.3 10.9 0.0 2.1 2 0 0 2 2 2 0 VPR/VPX protein Methyltransf_18 PF12847.2 gi|15669692|ref|NP_248505.1| - 0.072 13.6 0.0 0.62 10.6 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669692|ref|NP_248505.1| - 0.073 13.5 0.0 3.9 7.9 0.0 2.7 3 0 0 3 3 3 0 Methyltransferase domain MutS_V PF00488.16 gi|15669693|ref|NP_248506.1| - 0.022 14.1 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 MutS domain V zf-C4_Topoisom PF01396.14 gi|15669693|ref|NP_248506.1| - 0.023 14.1 0.2 2.1 7.9 0.1 2.6 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Phage_min_cap2 PF06152.6 gi|15669693|ref|NP_248506.1| - 0.23 10.3 4.4 0.12 11.3 0.4 1.9 2 0 0 2 2 2 0 Phage minor capsid protein 2 VRR_NUC PF08774.6 gi|15669694|ref|NP_248507.1| - 0.036 14.0 0.1 0.061 13.3 0.0 1.4 1 0 0 1 1 1 0 VRR-NUC domain Mrr_cat PF04471.7 gi|15669694|ref|NP_248507.1| - 0.055 13.2 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 Restriction endonuclease F420_oxidored PF03807.12 gi|15669695|ref|NP_248508.1| - 1.6e-23 82.9 2.0 5.2e-23 81.3 0.6 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.19 gi|15669695|ref|NP_248508.1| - 9.5e-05 22.6 1.0 0.001 19.3 0.1 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain PDH PF02153.12 gi|15669695|ref|NP_248508.1| - 0.00012 21.0 0.2 0.00026 19.9 0.1 1.5 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|15669695|ref|NP_248508.1| - 0.00034 20.3 0.1 0.00048 19.8 0.1 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Saccharop_dh PF03435.13 gi|15669695|ref|NP_248508.1| - 0.00091 18.3 0.2 0.0032 16.5 0.0 1.9 2 0 0 2 2 2 1 Saccharopine dehydrogenase Shikimate_DH PF01488.15 gi|15669695|ref|NP_248508.1| - 0.0031 17.5 0.0 0.0099 15.9 0.0 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase PTS_IIB PF02302.12 gi|15669695|ref|NP_248508.1| - 0.0059 17.0 4.7 0.13 12.7 0.4 2.3 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit adh_short PF00106.20 gi|15669695|ref|NP_248508.1| - 0.012 15.5 0.2 0.021 14.7 0.1 1.4 1 0 0 1 1 1 0 short chain dehydrogenase TrkA_N PF02254.13 gi|15669695|ref|NP_248508.1| - 0.014 15.4 1.3 0.02 14.9 0.2 1.7 2 0 0 2 2 2 0 TrkA-N domain Complex1_51K PF01512.12 gi|15669695|ref|NP_248508.1| - 0.039 13.6 0.1 0.06 13.0 0.1 1.3 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit FMN_red PF03358.10 gi|15669695|ref|NP_248508.1| - 0.05 13.1 0.1 0.13 11.7 0.0 1.8 2 0 0 2 2 2 0 NADPH-dependent FMN reductase NAD_binding_10 PF13460.1 gi|15669695|ref|NP_248508.1| - 0.11 12.4 0.3 0.18 11.7 0.1 1.6 1 1 1 2 2 2 0 NADH(P)-binding BON PF04972.12 gi|15669695|ref|NP_248508.1| - 0.44 10.3 2.6 2.9 7.7 0.0 2.7 2 0 0 2 2 2 0 BON domain Lactamase_B_2 PF12706.2 gi|15669696|ref|NP_248509.1| - 3.8e-35 121.2 0.0 5.7e-35 120.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|15669696|ref|NP_248509.1| - 1.7e-13 50.6 1.3 2.5e-12 46.8 0.0 2.7 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|15669696|ref|NP_248509.1| - 2.8e-05 23.5 0.0 5.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 tRNase Z endonuclease TrmB PF01978.14 gi|15669697|ref|NP_248510.1| - 7e-21 73.7 0.0 1e-20 73.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|15669697|ref|NP_248510.1| - 3.7e-07 29.7 0.0 4.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.12 gi|15669697|ref|NP_248510.1| - 7.3e-07 28.6 0.4 9.7e-07 28.2 0.3 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.17 gi|15669697|ref|NP_248510.1| - 6.2e-06 25.8 0.0 9.7e-06 25.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|15669697|ref|NP_248510.1| - 7.2e-06 25.4 0.0 9.8e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|15669697|ref|NP_248510.1| - 8.5e-06 25.0 0.1 1.5e-05 24.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.14 gi|15669697|ref|NP_248510.1| - 0.0002 21.2 0.1 0.00062 19.6 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.7 gi|15669697|ref|NP_248510.1| - 0.00042 19.9 0.0 0.00068 19.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain GntR PF00392.16 gi|15669697|ref|NP_248510.1| - 0.0012 18.1 0.1 0.002 17.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_27 PF13463.1 gi|15669697|ref|NP_248510.1| - 0.0024 18.1 0.0 0.0038 17.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_38 PF13936.1 gi|15669697|ref|NP_248510.1| - 0.0025 17.3 0.0 0.004 16.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.15 gi|15669697|ref|NP_248510.1| - 0.0026 17.8 0.0 0.0046 17.0 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HrcA_DNA-bdg PF03444.10 gi|15669697|ref|NP_248510.1| - 0.0026 17.1 0.0 0.0038 16.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Penicillinase_R PF03965.11 gi|15669697|ref|NP_248510.1| - 0.0044 17.1 0.1 0.0056 16.7 0.1 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_Tnp_Tc3_1 PF11427.3 gi|15669697|ref|NP_248510.1| - 0.011 15.2 0.0 0.021 14.4 0.0 1.5 1 0 0 1 1 1 0 Tc3 transposase Phage_rep_org_N PF09681.5 gi|15669697|ref|NP_248510.1| - 0.012 15.1 0.1 0.087 12.4 0.0 2.2 1 1 1 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_5 PF01022.15 gi|15669697|ref|NP_248510.1| - 0.016 14.8 0.0 0.028 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.1 gi|15669697|ref|NP_248510.1| - 0.022 14.8 0.0 0.044 13.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|15669697|ref|NP_248510.1| - 0.034 13.9 0.0 0.057 13.2 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_23 PF13384.1 gi|15669697|ref|NP_248510.1| - 0.037 13.6 0.0 0.076 12.6 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Stk19 PF10494.4 gi|15669697|ref|NP_248510.1| - 0.04 13.3 0.3 0.041 13.2 0.2 1.1 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 HTH_29 PF13551.1 gi|15669697|ref|NP_248510.1| - 0.042 14.0 0.0 0.35 11.0 0.0 2.1 1 1 1 2 2 2 0 Winged helix-turn helix DUF148 PF02520.12 gi|15669697|ref|NP_248510.1| - 0.063 13.0 2.1 1.8 8.3 0.4 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF148 DUF4423 PF14394.1 gi|15669697|ref|NP_248510.1| - 0.069 12.6 0.2 0.13 11.7 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Sigma54_DBD PF04552.8 gi|15669697|ref|NP_248510.1| - 0.08 12.4 0.1 0.12 11.8 0.0 1.4 1 1 0 1 1 1 0 Sigma-54, DNA binding domain DUF2250 PF10007.4 gi|15669697|ref|NP_248510.1| - 0.085 12.7 0.1 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_AsnC-type PF13404.1 gi|15669697|ref|NP_248510.1| - 0.12 11.9 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain RP-C PF03428.8 gi|15669697|ref|NP_248510.1| - 0.13 11.7 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_45 PF14947.1 gi|15669697|ref|NP_248510.1| - 0.13 12.0 0.6 0.24 11.2 0.0 1.7 2 1 0 2 2 2 0 Winged helix-turn-helix Prefoldin PF02996.12 gi|15669697|ref|NP_248510.1| - 0.14 11.8 1.2 0.63 9.7 0.6 1.9 1 1 1 2 2 2 0 Prefoldin subunit Epimerase_2 PF02350.14 gi|15669698|ref|NP_248511.1| - 3.4e-124 414.1 0.6 3.8e-124 413.9 0.4 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.1 gi|15669698|ref|NP_248511.1| - 3.8e-05 23.5 0.1 3.8e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|15669698|ref|NP_248511.1| - 0.17 11.9 0.0 0.31 11.1 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain ERCC4 PF02732.10 gi|15669699|ref|NP_248512.1| - 5.3e-25 87.8 0.2 5.3e-25 87.8 0.2 2.5 2 0 0 2 2 2 1 ERCC4 domain DEAD PF00270.24 gi|15669699|ref|NP_248512.1| - 9.7e-23 80.5 0.3 9.7e-23 80.5 0.2 3.6 4 0 0 4 4 4 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15669699|ref|NP_248512.1| - 1.3e-19 69.8 0.2 7.5e-19 67.3 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|15669699|ref|NP_248512.1| - 6.5e-19 68.4 0.4 6.5e-19 68.4 0.3 3.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit HHH_2 PF12826.2 gi|15669699|ref|NP_248512.1| - 4.8e-11 42.3 0.4 2.5e-10 40.0 0.1 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|15669699|ref|NP_248512.1| - 2.9e-09 36.9 7.8 1.3e-08 34.9 0.1 4.3 3 1 0 3 3 3 1 Helix-hairpin-helix domain HHH PF00633.18 gi|15669699|ref|NP_248512.1| - 1.2e-08 34.2 2.8 5.6e-07 28.9 0.1 3.3 3 0 0 3 3 2 1 Helix-hairpin-helix motif Helicase_C_2 PF13307.1 gi|15669699|ref|NP_248512.1| - 0.00028 20.8 1.6 0.078 12.9 0.0 3.3 3 0 0 3 3 3 1 Helicase C-terminal domain SecA_DEAD PF07517.9 gi|15669699|ref|NP_248512.1| - 0.0077 15.5 0.0 0.0077 15.5 0.0 2.8 2 1 0 2 2 2 1 SecA DEAD-like domain HHH_8 PF14716.1 gi|15669699|ref|NP_248512.1| - 0.012 15.7 1.5 0.96 9.6 0.1 2.9 1 1 1 2 2 2 0 Helix-hairpin-helix domain NPCC PF08058.6 gi|15669699|ref|NP_248512.1| - 0.037 13.8 0.2 0.15 11.9 0.1 2.0 1 0 0 1 1 1 0 Nuclear pore complex component AAA_19 PF13245.1 gi|15669699|ref|NP_248512.1| - 0.078 12.7 0.1 0.34 10.6 0.1 2.1 1 0 0 1 1 1 0 Part of AAA domain HhH-GPD PF00730.20 gi|15669699|ref|NP_248512.1| - 0.086 13.1 1.7 0.8 10.0 0.0 3.3 4 0 0 4 4 4 0 HhH-GPD superfamily base excision DNA repair protein Helicase_RecD PF05127.9 gi|15669699|ref|NP_248512.1| - 0.21 11.2 0.0 0.21 11.2 0.0 3.2 4 0 0 4 4 4 0 Helicase CARDB PF07705.6 gi|15669700|ref|NP_248513.1| - 5.3e-08 32.8 5.0 0.027 14.5 0.1 3.4 3 0 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|15669700|ref|NP_248513.1| - 0.00021 21.2 0.0 0.06 13.3 0.0 3.2 3 1 0 3 3 3 1 NPCBM-associated, NEW3 domain of alpha-galactosidase Arrestin_C PF02752.17 gi|15669700|ref|NP_248513.1| - 0.058 13.5 4.4 0.65 10.0 0.1 3.2 3 1 0 3 3 3 0 Arrestin (or S-antigen), C-terminal domain BatA PF07584.6 gi|15669700|ref|NP_248513.1| - 0.14 12.3 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal MacB_PCD PF12704.2 gi|15669701|ref|NP_248514.1| - 3.2e-49 167.6 0.1 3.2e-49 167.6 0.0 2.1 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|15669701|ref|NP_248514.1| - 5.2e-23 81.0 19.0 8.9e-22 77.1 9.8 2.5 2 0 0 2 2 2 2 FtsX-like permease family tRNA_edit PF04073.10 gi|15669701|ref|NP_248514.1| - 0.14 12.0 0.1 1.7 8.4 0.0 2.5 3 0 0 3 3 3 0 Aminoacyl-tRNA editing domain ABC_tran PF00005.22 gi|15669702|ref|NP_248515.1| - 5.8e-37 127.0 0.0 7.8e-37 126.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669702|ref|NP_248515.1| - 6.3e-13 49.3 0.0 1.1e-06 28.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|15669702|ref|NP_248515.1| - 1.9e-08 33.8 0.3 6.1e-07 28.8 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Arch_ATPase PF01637.13 gi|15669702|ref|NP_248515.1| - 1.6e-06 28.0 0.2 2.3e-06 27.5 0.1 1.5 1 1 0 1 1 1 1 Archaeal ATPase AAA_22 PF13401.1 gi|15669702|ref|NP_248515.1| - 4.2e-06 26.9 0.1 8.2e-05 22.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|15669702|ref|NP_248515.1| - 5.8e-06 25.5 0.0 9.7e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 NTPase_1 PF03266.10 gi|15669702|ref|NP_248515.1| - 5.4e-05 22.9 0.1 0.15 11.7 0.0 2.2 2 0 0 2 2 2 2 NTPase AAA_16 PF13191.1 gi|15669702|ref|NP_248515.1| - 9e-05 22.5 0.0 0.00012 22.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|15669702|ref|NP_248515.1| - 9.4e-05 21.8 0.0 0.00018 20.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|15669702|ref|NP_248515.1| - 0.00038 19.9 0.0 0.0093 15.3 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|15669702|ref|NP_248515.1| - 0.00054 19.1 0.2 0.087 11.8 0.1 2.1 1 1 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.10 gi|15669702|ref|NP_248515.1| - 0.00081 18.1 0.1 0.0012 17.5 0.1 1.3 1 1 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_13 PF13166.1 gi|15669702|ref|NP_248515.1| - 0.00091 17.8 0.0 0.24 9.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.17 gi|15669702|ref|NP_248515.1| - 0.0012 19.0 0.0 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 RNA helicase AAA_18 PF13238.1 gi|15669702|ref|NP_248515.1| - 0.0012 19.0 0.2 0.012 15.9 0.1 2.2 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|15669702|ref|NP_248515.1| - 0.0014 18.6 0.1 0.0031 17.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain G-alpha PF00503.15 gi|15669702|ref|NP_248515.1| - 0.0014 17.4 0.1 0.0015 17.3 0.1 1.1 1 0 0 1 1 1 1 G-protein alpha subunit MMR_HSR1 PF01926.18 gi|15669702|ref|NP_248515.1| - 0.0021 18.0 0.1 0.0047 16.8 0.1 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_17 PF13207.1 gi|15669702|ref|NP_248515.1| - 0.0045 17.7 0.2 0.0086 16.8 0.1 1.7 1 1 0 1 1 1 1 AAA domain MutS_V PF00488.16 gi|15669702|ref|NP_248515.1| - 0.007 15.7 0.0 0.71 9.2 0.0 2.1 2 0 0 2 2 2 1 MutS domain V AAA_10 PF12846.2 gi|15669702|ref|NP_248515.1| - 0.0071 15.8 0.1 0.019 14.4 0.0 1.7 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|15669702|ref|NP_248515.1| - 0.0072 16.2 0.0 0.014 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|15669702|ref|NP_248515.1| - 0.0072 16.5 0.5 0.13 12.4 0.3 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.1 gi|15669702|ref|NP_248515.1| - 0.0095 16.2 0.5 0.014 15.7 0.3 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|15669702|ref|NP_248515.1| - 0.019 14.8 0.1 0.032 14.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.1 gi|15669702|ref|NP_248515.1| - 0.028 14.3 0.1 0.18 11.7 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit T2SE PF00437.15 gi|15669702|ref|NP_248515.1| - 0.03 13.2 0.2 0.099 11.5 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein Mg_chelatase PF01078.16 gi|15669702|ref|NP_248515.1| - 0.034 13.3 0.2 0.11 11.6 0.0 1.9 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI NACHT PF05729.7 gi|15669702|ref|NP_248515.1| - 0.037 13.6 0.1 0.074 12.7 0.0 1.6 1 1 0 1 1 1 0 NACHT domain Septin PF00735.13 gi|15669702|ref|NP_248515.1| - 0.038 13.0 0.0 0.063 12.2 0.0 1.3 1 0 0 1 1 1 0 Septin AAA_24 PF13479.1 gi|15669702|ref|NP_248515.1| - 0.041 13.4 0.0 1.6 8.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain Miro PF08477.8 gi|15669702|ref|NP_248515.1| - 0.051 14.0 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein PduV-EutP PF10662.4 gi|15669702|ref|NP_248515.1| - 0.064 12.7 0.1 0.15 11.5 0.1 1.7 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.9 gi|15669702|ref|NP_248515.1| - 0.093 12.4 0.0 0.26 11.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.17 gi|15669702|ref|NP_248515.1| - 0.1 11.4 0.0 0.13 11.0 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain Adeno_IVa2 PF02456.10 gi|15669702|ref|NP_248515.1| - 0.13 10.9 0.0 0.23 10.0 0.0 1.4 1 0 0 1 1 1 0 Adenovirus IVa2 protein ATP-synt_ab PF00006.20 gi|15669702|ref|NP_248515.1| - 0.13 11.7 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF1931 PF09123.6 gi|15669703|ref|NP_248516.1| - 7.7e-47 158.7 6.4 8.6e-47 158.5 4.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) CBFD_NFYB_HMF PF00808.18 gi|15669703|ref|NP_248516.1| - 0.012 15.7 6.1 0.015 15.3 1.3 2.4 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone GlutR_dimer PF00745.15 gi|15669703|ref|NP_248516.1| - 0.053 13.4 0.2 0.053 13.4 0.1 2.2 2 1 0 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain 4HB_MCP_1 PF12729.2 gi|15669703|ref|NP_248516.1| - 0.076 12.3 1.2 0.1 11.9 0.2 1.7 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction tRNA-synt_2 PF00152.15 gi|15669703|ref|NP_248516.1| - 0.084 11.6 0.4 0.096 11.4 0.3 1.2 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) DUF1810 PF08837.6 gi|15669703|ref|NP_248516.1| - 0.13 11.8 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) TYW3 PF02676.9 gi|15669704|ref|NP_248517.1| - 1.6e-57 193.9 0.0 1.8e-57 193.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase TYW3 Plectin PF00681.15 gi|15669704|ref|NP_248517.1| - 0.13 11.8 0.0 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 Plectin repeat CMD PF02627.15 gi|15669705|ref|NP_248518.1| - 1.2e-13 50.6 0.0 1.4e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family ubiquitin PF00240.18 gi|15669705|ref|NP_248518.1| - 0.064 12.6 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family Topoisom_bac PF01131.15 gi|15669706|ref|NP_248519.1| - 8e-87 291.6 11.7 2.8e-57 194.4 1.1 3.9 4 0 0 4 4 4 2 DNA topoisomerase Toprim PF01751.17 gi|15669706|ref|NP_248519.1| - 7.9e-23 80.3 1.9 2.6e-22 78.6 0.2 2.9 2 0 0 2 2 2 1 Toprim domain LAGLIDADG_3 PF14528.1 gi|15669706|ref|NP_248519.1| - 1.2e-13 51.0 13.9 3.1e-12 46.5 0.5 5.7 5 0 0 5 5 5 2 LAGLIDADG-like domain DEAD PF00270.24 gi|15669706|ref|NP_248519.1| - 1.6e-13 50.4 0.2 6e-13 48.6 0.2 2.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15669706|ref|NP_248519.1| - 1.1e-08 34.7 0.5 0.0053 16.5 0.1 4.4 3 2 0 3 3 3 2 Helicase conserved C-terminal domain SecA_DEAD PF07517.9 gi|15669706|ref|NP_248519.1| - 0.00033 20.0 0.2 0.001 18.3 0.1 1.9 1 0 0 1 1 1 1 SecA DEAD-like domain Img2 PF05046.9 gi|15669706|ref|NP_248519.1| - 0.00082 19.5 1.5 0.05 13.8 0.1 3.3 2 0 0 2 2 2 1 Mitochondrial large subunit ribosomal protein (Img2) FHIPEP PF00771.15 gi|15669706|ref|NP_248519.1| - 0.052 11.8 1.4 0.099 10.9 0.3 1.9 2 0 0 2 2 2 0 FHIPEP family zf-C4pol PF14260.1 gi|15669706|ref|NP_248519.1| - 5.9 6.9 5.5 15 5.6 3.8 1.7 1 0 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta HTH_27 PF13463.1 gi|15669707|ref|NP_248520.1| - 0.014 15.7 0.0 0.79 10.0 0.0 3.0 3 0 0 3 3 3 0 Winged helix DNA-binding domain APG17 PF04108.7 gi|15669707|ref|NP_248520.1| - 0.39 9.4 4.6 0.96 8.1 0.1 2.1 2 0 0 2 2 2 0 Autophagy protein Apg17 AIG2 PF06094.7 gi|15669708|ref|NP_248521.1| - 6.1e-24 84.4 0.1 7.1e-24 84.2 0.1 1.0 1 0 0 1 1 1 1 AIG2-like family AIG2_2 PF13772.1 gi|15669708|ref|NP_248521.1| - 1.7e-05 24.8 0.0 2.4e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 AIG2-like family GCK PF07802.6 gi|15669708|ref|NP_248521.1| - 0.053 13.6 0.1 0.088 12.9 0.0 1.3 1 0 0 1 1 1 0 GCK domain DUF2192 PF09958.4 gi|15669708|ref|NP_248521.1| - 0.085 12.0 0.2 0.12 11.6 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) GATase_4 PF13230.1 gi|15669709|ref|NP_248522.1| - 7.7e-79 264.1 0.0 1e-78 263.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_2 PF00310.16 gi|15669709|ref|NP_248522.1| - 1.4e-09 37.1 0.0 9.8e-07 27.7 0.0 2.7 2 1 0 2 2 2 1 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|15669709|ref|NP_248522.1| - 1.1e-08 35.1 0.0 3.3e-08 33.5 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain DUF613 PF04764.7 gi|15669709|ref|NP_248522.1| - 0.018 14.9 2.2 2.3 8.1 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF613) GATase_7 PF13537.1 gi|15669709|ref|NP_248522.1| - 0.036 13.8 0.0 0.1 12.3 0.0 1.8 2 0 0 2 2 2 0 Glutamine amidotransferase domain HTH_12 PF08461.5 gi|15669709|ref|NP_248522.1| - 0.08 12.6 0.8 0.19 11.4 0.6 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Cullin_Nedd8 PF10557.4 gi|15669709|ref|NP_248522.1| - 1.7 8.5 4.1 2.4 8.0 0.8 2.5 2 1 0 2 2 2 0 Cullin protein neddylation domain HTH_24 PF13412.1 gi|15669709|ref|NP_248522.1| - 4.8 6.6 5.8 2.6 7.4 0.3 2.8 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding TM2 PF05154.11 gi|15669710|ref|NP_248523.1| - 1.6e-15 57.0 3.3 2.1e-15 56.6 2.3 1.2 1 0 0 1 1 1 1 TM2 domain DUF4234 PF14018.1 gi|15669710|ref|NP_248523.1| - 0.012 15.2 0.6 0.029 14.1 0.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) Pox_A28 PF04584.9 gi|15669710|ref|NP_248523.1| - 0.17 11.7 1.0 0.34 10.7 0.1 1.7 2 0 0 2 2 2 0 Poxvirus A28 family CPSase_L_D3 PF02787.14 gi|15669713|ref|NP_248526.1| - 0.03 14.0 3.0 0.4 10.4 0.1 2.9 2 0 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HD_4 PF13328.1 gi|15669713|ref|NP_248526.1| - 0.1 12.3 0.7 1.6 8.4 0.1 2.4 2 1 0 2 2 2 0 HD domain FAM180 PF15173.1 gi|15669713|ref|NP_248526.1| - 0.44 10.3 4.1 1.4 8.7 0.3 2.7 2 1 1 3 3 3 0 FAM180 family DUF4546 PF15079.1 gi|15669713|ref|NP_248526.1| - 5 6.2 9.5 0.42 9.7 1.4 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4546) His_kinase PF06580.8 gi|15669713|ref|NP_248526.1| - 5.4 7.0 10.7 0.2 11.6 0.8 3.5 3 2 1 4 4 4 0 Histidine kinase AAA_30 PF13604.1 gi|15669714|ref|NP_248527.1| - 2.5e-28 99.0 0.0 4.3e-28 98.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.1 gi|15669714|ref|NP_248527.1| - 3.8e-20 71.9 2.4 7.6e-20 70.9 0.2 2.7 3 0 0 3 3 1 1 UvrD-like helicase C-terminal domain HHH_4 PF14490.1 gi|15669714|ref|NP_248527.1| - 1.4e-19 69.5 1.2 3.7e-19 68.2 0.1 2.4 2 0 0 2 2 1 1 Helix-hairpin-helix containing domain AAA_19 PF13245.1 gi|15669714|ref|NP_248527.1| - 8e-12 44.7 0.1 1.4e-11 43.9 0.1 1.4 1 0 0 1 1 1 1 Part of AAA domain Viral_helicase1 PF01443.13 gi|15669714|ref|NP_248527.1| - 2.7e-11 43.4 0.0 2.3e-05 24.0 0.0 3.4 2 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_11 PF13086.1 gi|15669714|ref|NP_248527.1| - 8.8e-08 32.0 6.6 0.0036 16.9 0.0 3.8 4 0 0 4 4 4 2 AAA domain AAA_22 PF13401.1 gi|15669714|ref|NP_248527.1| - 2.8e-06 27.4 1.2 1.2e-05 25.4 0.0 2.7 3 0 0 3 3 2 1 AAA domain T2SE PF00437.15 gi|15669714|ref|NP_248527.1| - 0.00014 20.8 0.3 0.0003 19.8 0.2 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein Helicase_RecD PF05127.9 gi|15669714|ref|NP_248527.1| - 0.00028 20.5 0.0 0.00071 19.2 0.0 1.7 1 0 0 1 1 1 1 Helicase AAA PF00004.24 gi|15669714|ref|NP_248527.1| - 0.00097 19.3 1.0 0.021 15.0 0.0 3.4 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.11 gi|15669714|ref|NP_248527.1| - 0.001 18.3 0.2 0.023 13.9 0.2 2.7 1 1 0 1 1 1 1 PhoH-like protein DEAD PF00270.24 gi|15669714|ref|NP_248527.1| - 0.0041 16.6 0.4 0.036 13.5 0.1 2.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Zeta_toxin PF06414.7 gi|15669714|ref|NP_248527.1| - 0.0055 15.8 0.7 1.7 7.6 0.0 3.0 3 0 0 3 3 3 1 Zeta toxin DUF258 PF03193.11 gi|15669714|ref|NP_248527.1| - 0.0087 15.2 0.1 0.027 13.6 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function, DUF258 ABC_tran PF00005.22 gi|15669714|ref|NP_248527.1| - 0.025 14.8 1.2 0.11 12.7 0.0 2.7 3 0 0 3 3 3 0 ABC transporter RNA_helicase PF00910.17 gi|15669714|ref|NP_248527.1| - 0.026 14.6 0.3 0.5 10.5 0.0 2.9 2 0 0 2 2 2 0 RNA helicase DUF853 PF05872.7 gi|15669714|ref|NP_248527.1| - 0.058 11.7 0.1 0.094 11.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_17 PF13207.1 gi|15669714|ref|NP_248527.1| - 0.064 14.0 0.2 0.064 14.0 0.1 5.9 5 3 1 6 6 2 0 AAA domain NACHT PF05729.7 gi|15669714|ref|NP_248527.1| - 0.092 12.3 0.4 0.25 11.0 0.2 1.7 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.1 gi|15669714|ref|NP_248527.1| - 0.093 12.7 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.1 gi|15669714|ref|NP_248527.1| - 0.097 12.2 0.1 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain FAD_binding_3 PF01494.14 gi|15669715|ref|NP_248528.1| - 2.3e-12 46.6 0.1 2.1e-10 40.2 0.0 2.6 1 1 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.9 gi|15669715|ref|NP_248528.1| - 0.00024 19.8 0.1 0.014 14.0 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.7 gi|15669715|ref|NP_248528.1| - 0.0003 19.8 0.0 0.00099 18.1 0.0 1.7 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.9 gi|15669715|ref|NP_248528.1| - 0.028 14.3 3.3 0.041 13.7 2.3 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|15669715|ref|NP_248528.1| - 0.03 13.4 0.2 0.055 12.5 0.1 1.5 1 0 0 1 1 1 0 Thi4 family HI0933_like PF03486.9 gi|15669715|ref|NP_248528.1| - 0.04 12.3 0.5 0.069 11.6 0.4 1.4 1 0 0 1 1 1 0 HI0933-like protein NAD_binding_8 PF13450.1 gi|15669715|ref|NP_248528.1| - 0.093 12.7 0.1 0.46 10.5 0.1 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Na_H_Exchanger PF00999.16 gi|15669716|ref|NP_248529.1| - 1.7e-50 171.6 40.8 2.1e-50 171.3 28.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Scs3p PF10261.4 gi|15669716|ref|NP_248529.1| - 0.023 13.7 1.4 0.051 12.6 1.0 1.6 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM GWT1 PF06423.7 gi|15669716|ref|NP_248529.1| - 6.2 6.9 8.2 0.62 10.1 0.1 3.0 3 2 0 3 3 3 0 GWT1 TP_methylase PF00590.15 gi|15669717|ref|NP_248530.1| - 7.4e-43 146.6 0.0 8.5e-43 146.5 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CRCB PF02537.10 gi|15669718|ref|NP_248531.1| - 3.5e-32 110.7 12.2 3.9e-32 110.5 8.4 1.0 1 0 0 1 1 1 1 CrcB-like protein DUF190 PF02641.10 gi|15669719|ref|NP_248532.1| - 6.8e-42 141.4 1.4 7.7e-42 141.2 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 STT3 PF02516.9 gi|15669720|ref|NP_248533.1| - 4.2e-168 560.2 37.7 5.3e-168 559.9 26.1 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit ApbE PF02424.10 gi|15669721|ref|NP_248534.1| - 1.8e-21 76.5 1.8 2.4e-21 76.2 1.2 1.1 1 0 0 1 1 1 1 ApbE family Tic20 PF09685.5 gi|15669722|ref|NP_248535.1| - 2.2e-19 69.4 6.0 3.5e-19 68.7 4.2 1.3 1 0 0 1 1 1 1 Tic20-like protein Glycos_transf_4 PF00953.16 gi|15669722|ref|NP_248535.1| - 0.34 10.6 8.0 0.54 10.0 5.5 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 4 DUF3099 PF11298.3 gi|15669722|ref|NP_248535.1| - 2.6 7.8 7.9 0.38 10.5 2.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) TIM PF00121.13 gi|15669723|ref|NP_248536.1| - 1.8e-32 112.3 4.2 9.5e-31 106.7 2.9 2.0 1 1 0 1 1 1 1 Triosephosphate isomerase NMO PF03060.10 gi|15669723|ref|NP_248536.1| - 8e-07 28.5 0.4 1.3e-06 27.8 0.3 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.13 gi|15669723|ref|NP_248536.1| - 2.4e-05 23.3 0.4 2.4e-05 23.3 0.3 1.6 2 0 0 2 2 2 1 FMN-dependent dehydrogenase IGPS PF00218.16 gi|15669723|ref|NP_248536.1| - 3.1e-05 23.1 0.3 6.5e-05 22.1 0.2 1.5 1 1 0 1 1 1 1 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.15 gi|15669723|ref|NP_248536.1| - 3.3e-05 22.5 0.8 5.7e-05 21.7 0.5 1.4 1 1 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|15669723|ref|NP_248536.1| - 4.5e-05 22.8 1.6 0.00041 19.6 0.1 2.5 3 0 0 3 3 3 1 Histidine biosynthesis protein ThiG PF05690.9 gi|15669723|ref|NP_248536.1| - 6.1e-05 22.2 0.6 6.1e-05 22.2 0.4 2.2 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG PcrB PF01884.12 gi|15669723|ref|NP_248536.1| - 0.00025 20.4 4.6 0.00044 19.5 1.8 2.0 1 1 0 2 2 2 1 PcrB family TIM-br_sig_trns PF09370.5 gi|15669723|ref|NP_248536.1| - 0.016 14.2 0.1 0.031 13.3 0.1 1.4 1 1 0 1 1 1 0 TIM-barrel signal transduction protein Glu_synthase PF01645.12 gi|15669723|ref|NP_248536.1| - 0.022 13.7 0.3 0.035 13.0 0.2 1.4 1 1 0 1 1 1 0 Conserved region in glutamate synthase Hydrolase_like PF13242.1 gi|15669723|ref|NP_248536.1| - 0.057 13.1 0.1 1.3 8.8 0.1 2.3 2 0 0 2 2 2 0 HAD-hyrolase-like Dus PF01207.12 gi|15669723|ref|NP_248536.1| - 0.096 11.4 0.4 6.9 5.3 0.1 2.1 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) Hydrolase_6 PF13344.1 gi|15669723|ref|NP_248536.1| - 0.1 12.4 0.1 0.29 11.0 0.0 1.8 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DNA_binding_1 PF01035.15 gi|15669724|ref|NP_248537.1| - 1e-27 95.7 0.0 1.4e-27 95.2 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Sigma70_r4_2 PF08281.7 gi|15669724|ref|NP_248537.1| - 0.024 14.0 0.0 0.057 12.8 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_38 PF13936.1 gi|15669724|ref|NP_248537.1| - 0.12 11.9 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|15669724|ref|NP_248537.1| - 0.12 11.7 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Acetyltransf_1 PF00583.19 gi|15669725|ref|NP_248538.1| - 1e-19 70.3 0.3 1.4e-19 69.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|15669725|ref|NP_248538.1| - 1.9e-12 47.3 0.0 2.8e-12 46.7 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|15669725|ref|NP_248538.1| - 5.6e-12 45.6 0.3 7.7e-12 45.2 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|15669725|ref|NP_248538.1| - 2.6e-10 40.4 0.1 4.6e-10 39.6 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|15669725|ref|NP_248538.1| - 9e-10 38.6 0.0 2.3e-09 37.3 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|15669725|ref|NP_248538.1| - 1.6e-05 25.0 0.3 5.5e-05 23.3 0.2 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|15669725|ref|NP_248538.1| - 7.8e-05 22.3 0.0 0.00012 21.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|15669725|ref|NP_248538.1| - 9.8e-05 22.2 0.0 0.0018 18.1 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF3749 PF12568.3 gi|15669725|ref|NP_248538.1| - 0.04 13.5 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|15669725|ref|NP_248538.1| - 0.056 13.3 0.0 0.093 12.6 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Methylase_S PF01420.14 gi|15669726|ref|NP_248539.1| - 6.3e-59 198.7 17.5 1.2e-29 103.4 1.1 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain Chordopox_A30L PF06015.7 gi|15669726|ref|NP_248539.1| - 6.6 6.4 8.8 0.091 12.3 0.7 2.0 2 0 0 2 2 2 0 Chordopoxvirus A30L protein His_biosynth PF00977.16 gi|15669727|ref|NP_248540.1| - 1.9e-75 253.0 6.6 2.2e-75 252.8 4.6 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|15669727|ref|NP_248540.1| - 1.6e-11 43.6 0.4 5.1e-05 22.2 0.1 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|15669727|ref|NP_248540.1| - 5.8e-10 38.8 5.5 4.4e-07 29.3 0.2 2.3 2 0 0 2 2 2 2 PcrB family ThiG PF05690.9 gi|15669727|ref|NP_248540.1| - 8.6e-10 38.1 0.5 0.00031 19.8 0.0 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|15669727|ref|NP_248540.1| - 1e-07 31.4 0.2 4.4e-05 22.8 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Trp_syntA PF00290.15 gi|15669727|ref|NP_248540.1| - 1.6e-07 30.1 2.6 0.004 15.7 0.2 2.2 2 0 0 2 2 2 2 Tryptophan synthase alpha chain DeoC PF01791.4 gi|15669727|ref|NP_248540.1| - 1.2e-06 27.9 0.2 0.0017 17.7 0.0 2.5 2 1 0 2 2 2 2 DeoC/LacD family aldolase DHO_dh PF01180.16 gi|15669727|ref|NP_248540.1| - 4.1e-06 25.9 2.5 0.0023 16.9 0.3 3.1 3 0 0 3 3 3 1 Dihydroorotate dehydrogenase NanE PF04131.9 gi|15669727|ref|NP_248540.1| - 4.1e-06 25.8 0.4 0.0081 15.1 0.0 2.4 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.12 gi|15669727|ref|NP_248540.1| - 1.9e-05 23.8 0.9 0.021 13.9 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI QRPTase_C PF01729.14 gi|15669727|ref|NP_248540.1| - 3e-05 23.6 1.7 0.11 12.0 0.1 2.1 2 0 0 2 2 2 2 Quinolinate phosphoribosyl transferase, C-terminal domain IGPS PF00218.16 gi|15669727|ref|NP_248540.1| - 8.9e-05 21.6 0.2 0.0078 15.3 0.0 2.7 2 1 0 2 2 2 1 Indole-3-glycerol phosphate synthase PEP_mutase PF13714.1 gi|15669727|ref|NP_248540.1| - 0.00012 21.3 0.0 0.014 14.6 0.0 2.1 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase G3P_antiterm PF04309.7 gi|15669727|ref|NP_248540.1| - 0.0003 19.8 2.6 0.0077 15.2 0.2 2.3 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Ribul_P_3_epim PF00834.14 gi|15669727|ref|NP_248540.1| - 0.004 16.2 2.8 1.9 7.5 0.1 3.1 3 1 0 3 3 3 2 Ribulose-phosphate 3 epimerase family FMN_dh PF01070.13 gi|15669727|ref|NP_248540.1| - 0.004 16.0 2.0 0.085 11.6 0.1 2.1 2 0 0 2 2 2 1 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|15669727|ref|NP_248540.1| - 0.0041 16.0 2.6 0.21 10.4 0.4 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain CutC PF03932.9 gi|15669727|ref|NP_248540.1| - 0.0049 16.1 0.8 0.068 12.4 0.0 2.9 2 2 3 5 5 5 1 CutC family TIM PF00121.13 gi|15669727|ref|NP_248540.1| - 0.024 13.7 1.9 0.16 11.0 0.2 2.1 2 0 0 2 2 2 0 Triosephosphate isomerase SBDS PF01172.13 gi|15669727|ref|NP_248540.1| - 0.034 13.9 0.1 0.079 12.7 0.1 1.7 1 0 0 1 1 1 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein ThiF PF00899.16 gi|15669727|ref|NP_248540.1| - 0.054 13.3 0.4 0.66 9.7 0.1 2.6 2 1 0 2 2 2 0 ThiF family Radical_SAM PF04055.16 gi|15669727|ref|NP_248540.1| - 0.085 13.0 3.0 1 9.4 0.1 2.2 1 1 1 2 2 2 0 Radical SAM superfamily Pyr_redox PF00070.22 gi|15669727|ref|NP_248540.1| - 0.085 13.2 2.0 0.18 12.2 0.2 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DUF4113 PF13438.1 gi|15669727|ref|NP_248540.1| - 0.16 11.5 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) T2SE PF00437.15 gi|15669728|ref|NP_248541.1| - 2.3e-14 52.9 0.0 4.5e-14 51.9 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 gi|15669728|ref|NP_248541.1| - 2.5e-09 36.6 1.1 1.5e-08 34.1 0.8 2.4 1 0 0 1 1 1 1 KH domain PIN PF01850.16 gi|15669728|ref|NP_248541.1| - 3.4e-08 33.8 0.1 1.2e-07 32.1 0.1 2.0 1 0 0 1 1 1 1 PIN domain KH_3 PF13014.1 gi|15669728|ref|NP_248541.1| - 1.6e-05 24.4 0.4 5.6e-05 22.6 0.3 2.0 1 0 0 1 1 1 1 KH domain AAA_17 PF13207.1 gi|15669728|ref|NP_248541.1| - 2.1e-05 25.3 3.1 0.00012 22.8 0.0 3.6 3 2 0 3 3 3 1 AAA domain ArgK PF03308.11 gi|15669728|ref|NP_248541.1| - 8.5e-05 21.4 0.0 0.00029 19.7 0.0 1.9 1 0 0 1 1 1 1 ArgK protein PIN_4 PF13638.1 gi|15669728|ref|NP_248541.1| - 9.7e-05 22.4 0.2 0.00053 20.0 0.0 2.2 2 0 0 2 2 2 1 PIN domain AAA_16 PF13191.1 gi|15669728|ref|NP_248541.1| - 0.00016 21.6 0.0 0.00032 20.7 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|15669728|ref|NP_248541.1| - 0.00044 19.9 0.0 0.0009 18.9 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_29 PF13555.1 gi|15669728|ref|NP_248541.1| - 0.00072 19.0 0.0 0.003 17.0 0.0 2.0 1 0 0 1 1 1 1 P-loop containing region of AAA domain KH_2 PF07650.12 gi|15669728|ref|NP_248541.1| - 0.00089 18.7 5.5 0.00089 18.7 3.8 3.3 2 1 0 2 2 2 1 KH domain ATP_bind_1 PF03029.12 gi|15669728|ref|NP_248541.1| - 0.001 18.7 0.1 0.0021 17.6 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein ABC_tran PF00005.22 gi|15669728|ref|NP_248541.1| - 0.0011 19.2 0.1 0.0048 17.2 0.0 2.2 3 0 0 3 3 1 1 ABC transporter AAA_14 PF13173.1 gi|15669728|ref|NP_248541.1| - 0.0014 18.5 0.0 0.023 14.5 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_30 PF13604.1 gi|15669728|ref|NP_248541.1| - 0.0015 18.1 0.0 0.0065 16.0 0.0 2.0 3 0 0 3 3 2 1 AAA domain NTPase_1 PF03266.10 gi|15669728|ref|NP_248541.1| - 0.0016 18.2 0.0 0.0096 15.6 0.0 2.4 2 0 0 2 2 1 1 NTPase AAA_10 PF12846.2 gi|15669728|ref|NP_248541.1| - 0.0016 17.9 0.0 0.0045 16.4 0.0 1.8 1 0 0 1 1 1 1 AAA-like domain Thymidylate_kin PF02223.12 gi|15669728|ref|NP_248541.1| - 0.0023 17.3 2.1 0.011 15.0 0.0 3.2 4 0 0 4 4 4 1 Thymidylate kinase AAA_33 PF13671.1 gi|15669728|ref|NP_248541.1| - 0.0044 16.9 0.0 0.011 15.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain KH_4 PF13083.1 gi|15669728|ref|NP_248541.1| - 0.0074 15.8 5.2 0.016 14.8 0.5 3.9 2 1 0 2 2 2 1 KH domain AAA_22 PF13401.1 gi|15669728|ref|NP_248541.1| - 0.0075 16.4 0.0 0.022 14.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|15669728|ref|NP_248541.1| - 0.01 16.1 0.0 0.01 16.1 0.0 3.5 4 1 0 4 4 3 0 AAA domain AAA_5 PF07728.9 gi|15669728|ref|NP_248541.1| - 0.014 15.1 0.0 0.038 13.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Sigma54_activ_2 PF14532.1 gi|15669728|ref|NP_248541.1| - 0.018 15.1 0.0 0.12 12.4 0.0 2.3 2 1 0 2 2 2 0 Sigma-54 interaction domain Miro PF08477.8 gi|15669728|ref|NP_248541.1| - 0.041 14.3 0.0 0.16 12.5 0.0 2.0 1 0 0 1 1 1 0 Miro-like protein AAA_25 PF13481.1 gi|15669728|ref|NP_248541.1| - 0.042 13.2 0.0 0.11 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain DAP3 PF10236.4 gi|15669728|ref|NP_248541.1| - 0.042 12.7 0.0 0.096 11.6 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Zeta_toxin PF06414.7 gi|15669728|ref|NP_248541.1| - 0.044 12.8 0.0 0.11 11.5 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.24 gi|15669728|ref|NP_248541.1| - 0.045 13.9 0.0 0.22 11.7 0.0 2.2 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.1 gi|15669728|ref|NP_248541.1| - 0.051 13.5 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.9 gi|15669728|ref|NP_248541.1| - 0.067 12.1 0.0 0.15 10.9 0.0 1.5 1 0 0 1 1 1 0 PIF1-like helicase NACHT PF05729.7 gi|15669728|ref|NP_248541.1| - 0.074 12.7 0.0 0.27 10.9 0.0 2.0 2 0 0 2 2 1 0 NACHT domain DUF258 PF03193.11 gi|15669728|ref|NP_248541.1| - 0.1 11.7 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 IstB_IS21 PF01695.12 gi|15669728|ref|NP_248541.1| - 0.11 11.9 0.0 0.2 11.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.17 gi|15669728|ref|NP_248541.1| - 0.11 12.6 0.0 0.28 11.3 0.0 1.7 1 0 0 1 1 1 0 RNA helicase PHP PF02811.14 gi|15669728|ref|NP_248541.1| - 0.13 12.0 0.8 3.6 7.3 0.1 2.7 1 1 0 2 2 2 0 PHP domain KH_5 PF13184.1 gi|15669728|ref|NP_248541.1| - 1.2 8.9 8.1 0.074 12.8 0.4 2.9 4 0 0 4 4 2 0 NusA-like KH domain Bac_luciferase PF00296.15 gi|15669729|ref|NP_248542.1| - 3e-74 249.9 0.0 3.3e-74 249.7 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase FlgM PF04316.8 gi|15669729|ref|NP_248542.1| - 0.011 15.6 0.0 0.026 14.4 0.0 1.6 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM PHP PF02811.14 gi|15669729|ref|NP_248542.1| - 0.026 14.3 0.1 0.077 12.7 0.0 1.9 2 0 0 2 2 2 0 PHP domain RNA_pol_Rpb1_5 PF04998.12 gi|15669730|ref|NP_248543.1| - 0.36 10.0 3.8 0.54 9.4 2.6 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Pyr_redox_2 PF07992.9 gi|15669731|ref|NP_248544.1| - 4.9e-36 124.5 0.0 7e-36 124.0 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|15669731|ref|NP_248544.1| - 3.4e-15 56.6 0.2 3.7e-10 40.1 0.0 3.0 1 1 2 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|15669731|ref|NP_248544.1| - 5.2e-08 33.1 1.6 5.2e-08 33.1 1.1 3.1 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|15669731|ref|NP_248544.1| - 6e-08 31.9 7.0 0.0006 18.7 0.6 3.2 3 1 1 4 4 4 2 FAD binding domain FAD_oxidored PF12831.2 gi|15669731|ref|NP_248544.1| - 3.4e-05 23.1 0.0 0.026 13.6 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase DAO PF01266.19 gi|15669731|ref|NP_248544.1| - 9e-05 21.5 0.5 0.2 10.5 0.0 3.0 2 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|15669731|ref|NP_248544.1| - 0.00014 20.4 6.2 0.01 14.3 0.8 3.5 3 1 1 4 4 4 1 HI0933-like protein NAD_binding_9 PF13454.1 gi|15669731|ref|NP_248544.1| - 0.0025 17.6 0.3 1.7 8.3 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding GMC_oxred_N PF00732.14 gi|15669731|ref|NP_248544.1| - 0.0039 16.3 0.0 0.0068 15.5 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase Thi4 PF01946.12 gi|15669731|ref|NP_248544.1| - 0.0046 16.0 1.9 0.0086 15.1 0.3 2.0 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.1 gi|15669731|ref|NP_248544.1| - 0.011 15.6 0.1 0.019 14.9 0.1 1.4 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|15669731|ref|NP_248544.1| - 0.013 14.4 7.8 0.26 10.0 0.1 3.5 3 1 1 4 4 4 0 Glucose inhibited division protein A Tox-REase-2 PF15646.1 gi|15669731|ref|NP_248544.1| - 0.017 15.0 0.4 6 6.7 0.0 2.4 1 1 1 2 2 2 0 Restriction endonuclease fold toxin 2 K_oxygenase PF13434.1 gi|15669731|ref|NP_248544.1| - 0.047 12.6 0.2 2.5 6.9 0.0 2.6 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) CW_binding_2 PF04122.7 gi|15669731|ref|NP_248544.1| - 0.074 13.2 1.6 0.21 11.8 0.1 2.4 3 0 0 3 3 3 0 Putative cell wall binding repeat 2 DNA_pol3_beta PF00712.14 gi|15669731|ref|NP_248544.1| - 0.1 12.5 3.6 1.5 8.7 0.9 2.2 2 0 0 2 2 2 0 DNA polymerase III beta subunit, N-terminal domain FAD_binding_3 PF01494.14 gi|15669731|ref|NP_248544.1| - 0.14 11.1 0.0 0.2 10.6 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain DNA_pol_B_thumb PF14791.1 gi|15669732|ref|NP_248545.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase beta thumb KTI12 PF08433.5 gi|15669733|ref|NP_248546.1| - 5.9e-60 202.7 8.6 4.8e-59 199.7 6.0 1.9 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_33 PF13671.1 gi|15669733|ref|NP_248546.1| - 9.7e-21 74.1 0.0 1.7e-20 73.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|15669733|ref|NP_248546.1| - 5.2e-14 52.6 0.5 5.2e-14 52.6 0.4 2.4 1 1 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|15669733|ref|NP_248546.1| - 9.1e-11 42.6 7.5 3.4e-09 37.5 5.2 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|15669733|ref|NP_248546.1| - 5.1e-06 26.7 0.0 1.2e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) APS_kinase PF01583.15 gi|15669733|ref|NP_248546.1| - 6.7e-06 25.8 0.2 2.5e-05 23.9 0.0 2.0 2 1 0 2 2 2 1 Adenylylsulphate kinase Zeta_toxin PF06414.7 gi|15669733|ref|NP_248546.1| - 1.2e-05 24.5 0.3 0.00015 20.8 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin AAA_14 PF13173.1 gi|15669733|ref|NP_248546.1| - 2.1e-05 24.4 0.6 2.1e-05 24.4 0.4 2.5 1 1 2 3 3 3 1 AAA domain SKI PF01202.17 gi|15669733|ref|NP_248546.1| - 4.9e-05 23.2 1.7 0.00021 21.1 1.1 2.1 1 1 0 1 1 1 1 Shikimate kinase AAA_31 PF13614.1 gi|15669733|ref|NP_248546.1| - 9.7e-05 22.3 0.1 0.00029 20.8 0.0 1.9 2 1 0 2 2 2 1 AAA domain SRP54 PF00448.17 gi|15669733|ref|NP_248546.1| - 0.00018 21.0 0.1 0.00095 18.6 0.0 2.0 1 1 0 2 2 2 1 SRP54-type protein, GTPase domain Thymidylate_kin PF02223.12 gi|15669733|ref|NP_248546.1| - 0.00028 20.3 4.4 0.2 10.9 0.3 2.8 2 1 0 3 3 3 2 Thymidylate kinase AAA_16 PF13191.1 gi|15669733|ref|NP_248546.1| - 0.00058 19.8 0.0 0.0011 18.9 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.9 gi|15669733|ref|NP_248546.1| - 0.0011 18.7 0.0 0.0031 17.2 0.0 1.8 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) DnaB_C PF03796.10 gi|15669733|ref|NP_248546.1| - 0.0013 17.6 0.3 0.056 12.3 0.0 2.4 2 1 0 2 2 2 1 DnaB-like helicase C terminal domain NTPase_1 PF03266.10 gi|15669733|ref|NP_248546.1| - 0.0014 18.3 0.1 0.0014 18.3 0.0 2.1 2 1 0 2 2 2 1 NTPase ArsA_ATPase PF02374.10 gi|15669733|ref|NP_248546.1| - 0.0015 17.6 3.5 0.0041 16.1 0.0 2.4 2 1 0 2 2 2 1 Anion-transporting ATPase AAA_10 PF12846.2 gi|15669733|ref|NP_248546.1| - 0.002 17.6 2.2 0.0036 16.7 1.5 1.6 1 1 0 1 1 1 1 AAA-like domain AAA_22 PF13401.1 gi|15669733|ref|NP_248546.1| - 0.0023 18.0 0.4 0.01 15.9 0.3 2.4 1 1 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|15669733|ref|NP_248546.1| - 0.0026 16.5 3.6 0.0045 15.8 0.0 2.3 2 1 0 2 2 2 1 ArgK protein RNA_helicase PF00910.17 gi|15669733|ref|NP_248546.1| - 0.0029 17.7 2.1 0.0091 16.1 0.1 2.3 2 1 0 2 2 2 1 RNA helicase CbiA PF01656.18 gi|15669733|ref|NP_248546.1| - 0.003 16.9 4.8 0.012 15.0 3.3 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_3 PF07726.6 gi|15669733|ref|NP_248546.1| - 0.0033 17.0 0.0 0.16 11.5 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) CPT PF07931.7 gi|15669733|ref|NP_248546.1| - 0.0048 16.5 0.1 0.45 10.1 0.0 2.3 1 1 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein MobB PF03205.9 gi|15669733|ref|NP_248546.1| - 0.0053 16.4 3.9 0.0069 16.1 0.0 2.5 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B 6PF2K PF01591.13 gi|15669733|ref|NP_248546.1| - 0.0077 15.3 0.0 0.0077 15.3 0.0 3.1 2 1 0 3 3 3 1 6-phosphofructo-2-kinase ATP_bind_1 PF03029.12 gi|15669733|ref|NP_248546.1| - 0.011 15.2 0.8 0.13 11.7 0.0 2.4 2 1 1 3 3 3 0 Conserved hypothetical ATP binding protein Fringe PF02434.11 gi|15669733|ref|NP_248546.1| - 0.033 13.3 0.1 0.063 12.4 0.1 1.4 1 0 0 1 1 1 0 Fringe-like AAA_30 PF13604.1 gi|15669733|ref|NP_248546.1| - 0.039 13.5 0.0 0.079 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|15669733|ref|NP_248546.1| - 0.046 13.1 0.0 0.11 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|15669733|ref|NP_248546.1| - 0.061 13.2 0.0 0.17 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain ADK PF00406.17 gi|15669733|ref|NP_248546.1| - 0.073 12.9 1.8 12 5.8 0.0 2.5 2 1 0 2 2 2 0 Adenylate kinase Viral_helicase1 PF01443.13 gi|15669733|ref|NP_248546.1| - 0.075 12.5 0.0 0.15 11.5 0.0 1.6 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase CLAMP PF14769.1 gi|15669733|ref|NP_248546.1| - 0.087 12.9 0.7 0.22 11.6 0.1 2.0 2 0 0 2 2 1 0 Flagellar C1a complex subunit C1a-32 Fer4_NifH PF00142.13 gi|15669733|ref|NP_248546.1| - 0.09 11.9 1.3 0.36 9.9 0.0 2.2 2 1 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family IstB_IS21 PF01695.12 gi|15669733|ref|NP_248546.1| - 0.097 12.0 0.1 0.29 10.5 0.0 1.8 2 1 0 2 2 1 0 IstB-like ATP binding protein NACHT PF05729.7 gi|15669733|ref|NP_248546.1| - 0.13 11.9 0.0 0.31 10.6 0.0 1.6 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.22 gi|15669733|ref|NP_248546.1| - 0.15 12.3 2.7 0.67 10.2 1.8 2.1 1 1 0 1 1 1 0 ABC transporter Mg_chelatase PF01078.16 gi|15669733|ref|NP_248546.1| - 0.17 11.0 0.0 0.29 10.2 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.18 gi|15669733|ref|NP_248546.1| - 0.28 11.1 4.7 2.1 8.3 3.3 2.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase P-mevalo_kinase PF04275.9 gi|15669733|ref|NP_248546.1| - 2.1 8.0 9.1 6 6.6 0.9 3.1 2 1 0 2 2 2 0 Phosphomevalonate kinase Cor1 PF04803.7 gi|15669733|ref|NP_248546.1| - 3.7 7.3 13.4 1.3 8.7 5.6 2.8 2 2 1 3 3 3 0 Cor1/Xlr/Xmr conserved region DUF327 PF03885.8 gi|15669734|ref|NP_248547.1| - 0.0042 16.9 3.1 0.0053 16.6 2.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF327) NPV_P10 PF05531.7 gi|15669734|ref|NP_248547.1| - 0.006 16.7 2.5 0.22 11.8 0.2 2.1 1 1 1 2 2 2 2 Nucleopolyhedrovirus P10 protein Syntaxin_2 PF14523.1 gi|15669734|ref|NP_248547.1| - 0.03 14.3 0.9 0.038 14.0 0.6 1.2 1 0 0 1 1 1 0 Syntaxin-like protein DUF4200 PF13863.1 gi|15669734|ref|NP_248547.1| - 0.034 14.1 6.6 0.044 13.7 4.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) RRF_GI PF12614.3 gi|15669734|ref|NP_248547.1| - 0.042 13.6 0.9 0.054 13.3 0.6 1.1 1 0 0 1 1 1 0 Ribosome recycling factor Exo70 PF03081.10 gi|15669734|ref|NP_248547.1| - 0.043 12.6 0.3 0.049 12.4 0.2 1.0 1 0 0 1 1 1 0 Exo70 exocyst complex subunit DUF4455 PF14643.1 gi|15669734|ref|NP_248547.1| - 0.044 12.4 2.6 0.052 12.1 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) FlgN PF05130.7 gi|15669734|ref|NP_248547.1| - 0.044 14.0 0.2 0.054 13.7 0.1 1.1 1 0 0 1 1 1 0 FlgN protein APC2 PF08672.6 gi|15669734|ref|NP_248547.1| - 0.048 13.9 0.9 1.1 9.5 0.2 2.2 1 1 1 2 2 2 0 Anaphase promoting complex (APC) subunit 2 DUF4559 PF15112.1 gi|15669734|ref|NP_248547.1| - 0.056 12.6 3.0 0.065 12.3 2.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Sp100 PF03172.8 gi|15669734|ref|NP_248547.1| - 0.082 12.8 0.1 0.097 12.6 0.1 1.3 1 0 0 1 1 1 0 Sp100 domain TRM PF02005.11 gi|15669734|ref|NP_248547.1| - 0.11 11.4 0.5 0.13 11.1 0.3 1.1 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase EF-hand_8 PF13833.1 gi|15669734|ref|NP_248547.1| - 0.13 11.9 0.3 0.34 10.5 0.2 1.7 2 0 0 2 2 2 0 EF-hand domain pair Syntaxin PF00804.20 gi|15669734|ref|NP_248547.1| - 0.14 12.2 4.2 0.2 11.8 2.9 1.3 1 0 0 1 1 1 0 Syntaxin AAA_13 PF13166.1 gi|15669734|ref|NP_248547.1| - 0.19 10.1 4.6 0.19 10.1 3.2 1.0 1 0 0 1 1 1 0 AAA domain IncA PF04156.9 gi|15669734|ref|NP_248547.1| - 0.35 10.4 3.0 0.43 10.1 2.1 1.1 1 0 0 1 1 1 0 IncA protein UPF0122 PF04297.9 gi|15669734|ref|NP_248547.1| - 0.41 10.6 5.9 0.53 10.3 4.1 1.2 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF1664 PF07889.7 gi|15669734|ref|NP_248547.1| - 0.56 10.0 4.7 1.7 8.4 3.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2762 PF10960.3 gi|15669734|ref|NP_248547.1| - 3.7 7.3 7.4 3.1 7.5 1.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2762) UPF0158 PF03682.8 gi|15669735|ref|NP_248548.1| - 0.0021 17.7 0.3 0.0027 17.3 0.2 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0158) FUN14 PF04930.10 gi|15669735|ref|NP_248548.1| - 0.094 12.9 0.4 0.17 12.1 0.3 1.5 1 1 0 1 1 1 0 FUN14 family Amidohydro_1 PF01979.15 gi|15669736|ref|NP_248549.1| - 1.7e-70 238.3 0.1 2.2e-70 237.9 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|15669736|ref|NP_248549.1| - 4.1e-14 52.1 0.7 1.6e-13 50.2 0.0 2.3 3 0 0 3 3 3 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|15669736|ref|NP_248549.1| - 6.8e-12 45.9 0.0 5.1e-08 33.2 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_3 PF07969.6 gi|15669736|ref|NP_248549.1| - 6e-09 35.6 0.0 1.6e-07 30.8 0.0 2.5 2 1 0 2 2 2 1 Amidohydrolase family A_deaminase PF00962.17 gi|15669736|ref|NP_248549.1| - 0.00086 18.3 0.1 0.002 17.1 0.0 1.6 2 0 0 2 2 2 1 Adenosine/AMP deaminase TatD_DNase PF01026.16 gi|15669736|ref|NP_248549.1| - 0.0029 16.8 0.1 0.017 14.3 0.0 2.1 2 1 0 2 2 2 1 TatD related DNase AAA_21 PF13304.1 gi|15669737|ref|NP_248550.1| - 6.7e-09 36.1 64.4 9.9e-07 29.0 19.1 5.0 2 2 1 3 3 3 2 AAA domain ABC_tran PF00005.22 gi|15669737|ref|NP_248550.1| - 0.00034 20.9 0.0 0.0013 19.0 0.0 2.1 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.14 gi|15669737|ref|NP_248550.1| - 0.0008 18.6 3.6 0.0032 16.7 0.5 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FAD_binding_8 PF08022.7 gi|15669737|ref|NP_248550.1| - 0.038 13.8 0.0 0.22 11.4 0.0 2.3 2 0 0 2 2 2 0 FAD-binding domain HTH_1 PF00126.22 gi|15669737|ref|NP_248550.1| - 0.12 12.1 0.0 0.9 9.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family RTX_C PF08339.5 gi|15669737|ref|NP_248550.1| - 0.13 11.9 3.6 0.19 11.4 0.0 2.7 3 0 0 3 3 3 0 RTX C-terminal domain KH_5 PF13184.1 gi|15669737|ref|NP_248550.1| - 0.18 11.6 4.2 0.69 9.7 0.7 3.4 2 1 1 3 3 3 0 NusA-like KH domain IlvN PF07991.7 gi|15669738|ref|NP_248551.1| - 1.5e-74 248.8 0.6 2.2e-74 248.3 0.4 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|15669738|ref|NP_248551.1| - 6.8e-58 194.7 0.4 9.7e-58 194.2 0.3 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 gi|15669738|ref|NP_248551.1| - 3.1e-07 30.7 0.1 7.1e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|15669738|ref|NP_248551.1| - 2.4e-06 26.8 0.0 4e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|15669738|ref|NP_248551.1| - 3.4e-06 26.9 0.0 6.8e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.16 gi|15669738|ref|NP_248551.1| - 2e-05 24.5 0.1 4.6e-05 23.3 0.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.14 gi|15669738|ref|NP_248551.1| - 0.0092 16.4 0.1 0.024 15.1 0.1 1.7 1 0 0 1 1 1 1 CoA binding domain YfaZ PF07437.6 gi|15669738|ref|NP_248551.1| - 0.052 12.9 0.0 0.091 12.1 0.0 1.3 1 0 0 1 1 1 0 YfaZ precursor CoA_binding_2 PF13380.1 gi|15669738|ref|NP_248551.1| - 0.13 12.4 0.1 0.47 10.6 0.0 1.9 2 0 0 2 2 2 0 CoA binding domain NAD_binding_7 PF13241.1 gi|15669738|ref|NP_248551.1| - 0.14 12.4 0.1 0.54 10.5 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.18 gi|15669738|ref|NP_248551.1| - 0.43 10.3 1.8 11 5.7 0.3 3.0 3 1 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AAA_14 PF13173.1 gi|15669739|ref|NP_248552.1| - 9.8e-37 125.7 1.0 9.8e-37 125.7 0.7 2.7 3 1 0 3 3 3 1 AAA domain DUF4143 PF13635.1 gi|15669739|ref|NP_248552.1| - 8.2e-12 45.1 0.6 2.4e-11 43.6 0.4 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) HTH_3 PF01381.17 gi|15669740|ref|NP_248553.1| - 1.1e-10 41.2 0.1 3.6e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|15669740|ref|NP_248553.1| - 2.1e-07 30.8 0.3 1.3e-06 28.3 0.0 2.4 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|15669740|ref|NP_248553.1| - 0.0043 17.2 0.0 0.0073 16.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DRTGG PF07085.7 gi|15669740|ref|NP_248553.1| - 0.017 14.7 0.1 0.059 12.9 0.0 1.9 2 0 0 2 2 2 0 DRTGG domain Aminotran_MocR PF12897.2 gi|15669740|ref|NP_248553.1| - 0.02 13.4 0.0 0.03 12.8 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase NUMOD1 PF07453.8 gi|15669740|ref|NP_248553.1| - 0.05 13.4 0.0 0.17 11.7 0.0 2.0 1 0 0 1 1 1 0 NUMOD1 domain ACP_syn_III_C PF08541.5 gi|15669741|ref|NP_248554.1| - 2.1e-10 40.4 0.0 6.6e-10 38.8 0.0 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_N PF01154.12 gi|15669741|ref|NP_248554.1| - 5.8e-06 25.9 0.1 7.8e-06 25.5 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.5 gi|15669741|ref|NP_248554.1| - 1e-05 25.1 1.1 2.6e-05 23.8 0.7 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_C PF08540.5 gi|15669741|ref|NP_248554.1| - 0.00032 20.2 0.1 0.0088 15.5 0.0 2.1 1 1 1 2 2 2 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.18 gi|15669741|ref|NP_248554.1| - 0.024 13.6 0.1 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain NTP_transf_2 PF01909.18 gi|15669742|ref|NP_248555.1| - 1.9e-11 44.1 1.0 3e-11 43.4 0.6 1.5 1 1 0 1 1 1 1 Nucleotidyltransferase domain Myb_DNA-bind_5 PF13873.1 gi|15669742|ref|NP_248555.1| - 0.00024 20.9 0.5 0.00034 20.4 0.4 1.2 1 0 0 1 1 1 1 Myb/SANT-like DNA-binding domain DUF86 PF01934.12 gi|15669743|ref|NP_248556.1| - 1.7e-14 53.4 0.7 2.2e-14 53.1 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF4145 PF13643.1 gi|15669743|ref|NP_248556.1| - 0.00046 20.0 0.7 0.00066 19.4 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) COG5 PF10392.4 gi|15669743|ref|NP_248556.1| - 0.015 15.2 0.2 0.028 14.3 0.2 1.3 1 1 0 1 1 1 0 Golgi transport complex subunit 5 CLASP_N PF12348.3 gi|15669743|ref|NP_248556.1| - 0.04 13.2 0.1 0.05 12.9 0.1 1.1 1 0 0 1 1 1 0 CLASP N terminal NTase_sub_bind PF08780.6 gi|15669743|ref|NP_248556.1| - 0.077 12.7 0.1 0.1 12.3 0.1 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase substrate binding protein like SNase PF00565.12 gi|15669743|ref|NP_248556.1| - 0.12 12.6 0.4 0.17 12.1 0.3 1.2 1 0 0 1 1 1 0 Staphylococcal nuclease homologue Sec5 PF15469.1 gi|15669743|ref|NP_248556.1| - 0.56 9.9 3.4 0.66 9.6 2.4 1.1 1 0 0 1 1 1 0 Exocyst complex component Sec5 Thiolase_N PF00108.18 gi|15669744|ref|NP_248557.1| - 1.4e-12 47.1 0.6 4.7e-11 42.1 0.1 2.3 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|15669744|ref|NP_248557.1| - 5.7e-12 45.1 0.3 4.3e-11 42.2 0.1 2.3 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|15669744|ref|NP_248557.1| - 4.5e-07 29.6 6.0 5.2e-06 26.1 2.5 2.7 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 gi|15669744|ref|NP_248557.1| - 1.4e-05 24.6 0.7 0.0015 18.1 0.3 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.17 gi|15669744|ref|NP_248557.1| - 0.0063 16.3 1.6 0.13 12.1 0.1 3.0 3 1 0 3 3 3 1 Beta-ketoacyl synthase, C-terminal domain RNA_bind_2 PF10133.4 gi|15669746|ref|NP_248559.1| - 8.2e-24 83.4 4.7 8.9e-24 83.2 3.3 1.0 1 0 0 1 1 1 1 Predicted RNA-binding protein KOW PF00467.24 gi|15669746|ref|NP_248559.1| - 0.12 12.1 2.4 0.31 10.8 0.1 2.1 2 0 0 2 2 2 0 KOW motif DUF35 PF01796.12 gi|15669747|ref|NP_248560.1| - 1.3e-23 83.0 0.1 1.8e-23 82.5 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|15669747|ref|NP_248560.1| - 1.2e-08 34.6 2.2 1.7e-08 34.1 1.5 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_4 PF13717.1 gi|15669747|ref|NP_248560.1| - 0.0011 18.5 2.8 0.96 9.1 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|15669747|ref|NP_248560.1| - 0.0017 17.8 2.8 0.91 9.1 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|15669747|ref|NP_248560.1| - 0.03 14.1 2.7 0.05 13.4 1.9 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_3 PF13920.1 gi|15669747|ref|NP_248560.1| - 0.071 12.7 3.2 0.11 12.1 2.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|15669747|ref|NP_248560.1| - 0.18 11.0 5.1 1.1 8.5 4.0 2.0 1 1 1 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|15669747|ref|NP_248560.1| - 0.44 10.3 3.1 3.6 7.4 2.7 2.1 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HTH_5 PF01022.15 gi|15669748|ref|NP_248561.1| - 1.9e-17 62.6 0.3 2.8e-17 62.0 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|15669748|ref|NP_248561.1| - 3.6e-08 33.1 0.0 4.8e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|15669748|ref|NP_248561.1| - 1.2e-07 31.2 0.3 2.7e-07 30.2 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|15669748|ref|NP_248561.1| - 6.1e-07 28.7 0.4 9.6e-07 28.0 0.3 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HxlR PF01638.12 gi|15669748|ref|NP_248561.1| - 1.9e-05 24.1 0.3 3e-05 23.5 0.2 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Fe_dep_repress PF01325.14 gi|15669748|ref|NP_248561.1| - 2.5e-05 24.1 0.2 6.5e-05 22.7 0.1 1.7 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.2 gi|15669748|ref|NP_248561.1| - 5.4e-05 22.7 0.0 8.9e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|15669748|ref|NP_248561.1| - 9.3e-05 22.0 0.1 0.00016 21.3 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|15669748|ref|NP_248561.1| - 9.5e-05 22.6 0.0 0.00016 21.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_38 PF13936.1 gi|15669748|ref|NP_248561.1| - 0.0001 21.7 0.2 0.00023 20.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.4 gi|15669748|ref|NP_248561.1| - 0.00011 22.0 3.2 0.0074 16.1 1.2 2.5 2 1 0 2 2 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_45 PF14947.1 gi|15669748|ref|NP_248561.1| - 0.00013 21.7 4.4 0.00013 21.7 3.0 1.5 2 0 0 2 2 1 1 Winged helix-turn-helix HTH_IclR PF09339.5 gi|15669748|ref|NP_248561.1| - 0.00022 20.7 0.0 0.00034 20.1 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_10 PF04967.7 gi|15669748|ref|NP_248561.1| - 0.00026 20.5 0.0 0.00045 19.7 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain DUF3116 PF11313.3 gi|15669748|ref|NP_248561.1| - 0.00033 20.2 3.6 0.00071 19.1 2.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) HTH_11 PF08279.7 gi|15669748|ref|NP_248561.1| - 0.00042 19.9 0.2 0.00067 19.2 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_3 PF01381.17 gi|15669748|ref|NP_248561.1| - 0.00056 19.7 0.3 0.0013 18.5 0.1 1.7 1 1 1 2 2 1 1 Helix-turn-helix DUF4364 PF14277.1 gi|15669748|ref|NP_248561.1| - 0.00066 19.3 0.9 0.0075 15.8 0.1 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4364) Baculo_E56 PF04639.7 gi|15669748|ref|NP_248561.1| - 0.00084 18.0 3.9 0.13 10.9 0.5 2.1 2 0 0 2 2 2 2 Baculoviral E56 protein, specific to ODV envelope HTH_23 PF13384.1 gi|15669748|ref|NP_248561.1| - 0.001 18.6 0.0 0.0021 17.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain B-block_TFIIIC PF04182.7 gi|15669748|ref|NP_248561.1| - 0.0013 18.5 0.1 0.0027 17.5 0.1 1.6 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC DUF2513 PF10711.4 gi|15669748|ref|NP_248561.1| - 0.0028 17.6 0.2 0.0045 17.0 0.2 1.3 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_Crp_2 PF13545.1 gi|15669748|ref|NP_248561.1| - 0.0035 17.0 0.0 0.0055 16.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_34 PF13601.1 gi|15669748|ref|NP_248561.1| - 0.0046 16.9 0.5 0.0046 16.9 0.3 1.6 2 0 0 2 2 1 1 Winged helix DNA-binding domain HTH_40 PF14493.1 gi|15669748|ref|NP_248561.1| - 0.007 16.5 0.2 0.0089 16.2 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_12 PF08461.5 gi|15669748|ref|NP_248561.1| - 0.0076 15.9 0.1 0.04 13.6 0.1 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_28 PF13518.1 gi|15669748|ref|NP_248561.1| - 0.011 15.7 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1495 PF07381.6 gi|15669748|ref|NP_248561.1| - 0.011 15.3 0.6 0.15 11.7 0.4 2.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) NUMOD1 PF07453.8 gi|15669748|ref|NP_248561.1| - 0.012 15.4 0.3 0.012 15.4 0.2 2.4 2 0 0 2 2 2 0 NUMOD1 domain HTH_19 PF12844.2 gi|15669748|ref|NP_248561.1| - 0.017 15.1 0.6 0.029 14.4 0.4 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.1 gi|15669748|ref|NP_248561.1| - 0.027 14.6 0.7 0.1 12.7 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DctQ PF04290.7 gi|15669748|ref|NP_248561.1| - 0.028 14.2 0.7 0.039 13.7 0.5 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component Tetraspannin PF00335.15 gi|15669748|ref|NP_248561.1| - 0.032 13.5 3.3 0.046 12.9 2.3 1.2 1 0 0 1 1 1 0 Tetraspanin family HTH_17 PF12728.2 gi|15669748|ref|NP_248561.1| - 0.034 14.3 0.0 0.08 13.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.12 gi|15669748|ref|NP_248561.1| - 0.042 13.3 1.0 0.077 12.5 0.7 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_29 PF13551.1 gi|15669748|ref|NP_248561.1| - 0.051 13.7 0.0 0.081 13.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_26 PF13443.1 gi|15669748|ref|NP_248561.1| - 0.054 13.7 0.2 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain KorB PF08535.5 gi|15669748|ref|NP_248561.1| - 0.058 13.5 0.0 0.095 12.8 0.0 1.4 1 0 0 1 1 1 0 KorB domain SpoIIID PF12116.3 gi|15669748|ref|NP_248561.1| - 0.058 13.3 0.2 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 Stage III sporulation protein D Sigma70_r4 PF04545.11 gi|15669748|ref|NP_248561.1| - 0.059 12.6 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 PadR PF03551.9 gi|15669748|ref|NP_248561.1| - 0.065 13.0 0.7 0.17 11.7 0.5 1.7 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family DUF771 PF05595.6 gi|15669748|ref|NP_248561.1| - 0.067 13.0 0.9 0.12 12.2 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF771) LexA_DNA_bind PF01726.11 gi|15669748|ref|NP_248561.1| - 0.071 12.6 0.1 0.2 11.2 0.0 1.7 2 0 0 2 2 1 0 LexA DNA binding domain DUF2976 PF11190.3 gi|15669748|ref|NP_248561.1| - 0.13 11.8 5.8 0.12 11.9 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) W2 PF02020.13 gi|15669748|ref|NP_248561.1| - 0.14 12.1 0.3 0.21 11.5 0.2 1.3 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon Beta_propel PF09826.4 gi|15669749|ref|NP_248562.1| - 5e-152 506.8 7.5 1.2e-150 502.2 5.2 2.0 1 1 0 1 1 1 1 Beta propeller domain ETRAMP PF09716.5 gi|15669749|ref|NP_248562.1| - 0.028 14.3 1.3 0.12 12.3 0.9 2.2 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) tRNA-synt_2 PF00152.15 gi|15669750|ref|NP_248563.1| - 1.3e-100 336.4 0.6 1.7e-100 336.0 0.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|15669750|ref|NP_248563.1| - 1.3e-15 56.9 0.4 2.8e-15 55.9 0.3 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|15669750|ref|NP_248563.1| - 0.0055 15.9 0.1 0.1 11.7 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) Gate PF07670.9 gi|15669751|ref|NP_248564.1| - 4.7e-07 29.6 18.2 3.7e-06 26.8 1.2 3.2 2 2 1 3 3 3 2 Nucleoside recognition Met_10 PF02475.11 gi|15669752|ref|NP_248565.1| - 7.8e-75 250.8 3.2 9.5e-75 250.5 2.2 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_31 PF13847.1 gi|15669752|ref|NP_248565.1| - 1.7e-05 24.4 0.1 5.6e-05 22.7 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|15669752|ref|NP_248565.1| - 2.9e-05 23.2 0.2 0.00017 20.7 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_18 PF12847.2 gi|15669752|ref|NP_248565.1| - 6e-05 23.5 0.0 0.00011 22.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15669752|ref|NP_248565.1| - 7.9e-05 22.6 0.0 0.00017 21.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|15669752|ref|NP_248565.1| - 9.9e-05 21.7 0.0 0.00022 20.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain GidB PF02527.10 gi|15669752|ref|NP_248565.1| - 0.0012 18.0 0.2 0.0043 16.2 0.0 1.9 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G DNA_methylase PF00145.12 gi|15669752|ref|NP_248565.1| - 0.0028 16.8 0.0 0.0049 16.0 0.0 1.4 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase RrnaAD PF00398.15 gi|15669752|ref|NP_248565.1| - 0.0031 16.5 0.0 0.0041 16.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PRMT5 PF05185.11 gi|15669752|ref|NP_248565.1| - 0.0053 15.7 0.3 0.016 14.1 0.1 1.7 1 1 1 2 2 2 1 PRMT5 arginine-N-methyltransferase Methyltransf_15 PF09445.5 gi|15669752|ref|NP_248565.1| - 0.019 14.5 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|15669752|ref|NP_248565.1| - 0.038 13.3 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 PrmA PF06325.8 gi|15669752|ref|NP_248565.1| - 0.043 12.9 0.0 0.063 12.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ACT_6 PF13740.1 gi|15669753|ref|NP_248566.1| - 1.1e-20 73.1 0.9 1.2e-20 72.9 0.6 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|15669753|ref|NP_248566.1| - 6.9e-11 41.4 0.7 8.9e-11 41.0 0.5 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|15669753|ref|NP_248566.1| - 1.5e-06 28.4 1.8 1.9e-06 28.1 1.2 1.2 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.1 gi|15669753|ref|NP_248566.1| - 1.3e-05 24.6 0.6 2.1e-05 23.9 0.4 1.4 1 0 0 1 1 1 1 ACT domain NTPase_1 PF03266.10 gi|15669754|ref|NP_248567.1| - 2.8e-58 196.3 1.8 3.2e-58 196.1 1.2 1.0 1 0 0 1 1 1 1 NTPase AAA_17 PF13207.1 gi|15669754|ref|NP_248567.1| - 8.5e-09 36.2 1.1 1.6e-08 35.4 0.8 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|15669754|ref|NP_248567.1| - 1.5e-08 35.0 2.4 2.5e-08 34.2 1.6 1.5 1 1 0 1 1 1 1 AAA domain DUF2478 PF10649.4 gi|15669754|ref|NP_248567.1| - 1.7e-07 30.7 0.0 8.3e-07 28.4 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF2478) AAA PF00004.24 gi|15669754|ref|NP_248567.1| - 1e-06 28.9 1.2 2.6e-06 27.6 0.8 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ArgK PF03308.11 gi|15669754|ref|NP_248567.1| - 2.5e-06 26.4 0.1 5.3e-06 25.3 0.1 1.6 1 0 0 1 1 1 1 ArgK protein Arch_ATPase PF01637.13 gi|15669754|ref|NP_248567.1| - 1.5e-05 24.8 2.0 2.1e-05 24.3 1.1 1.5 1 1 0 1 1 1 1 Archaeal ATPase IstB_IS21 PF01695.12 gi|15669754|ref|NP_248567.1| - 2e-05 24.0 0.5 0.016 14.6 0.1 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein MobB PF03205.9 gi|15669754|ref|NP_248567.1| - 3.1e-05 23.6 1.2 8.1e-05 22.3 0.8 1.9 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|15669754|ref|NP_248567.1| - 4.5e-05 22.9 1.4 0.0062 15.9 0.2 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_22 PF13401.1 gi|15669754|ref|NP_248567.1| - 4.7e-05 23.5 0.7 0.00036 20.6 0.4 2.2 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.5 gi|15669754|ref|NP_248567.1| - 9.9e-05 21.6 0.6 0.00071 18.8 0.4 2.1 1 1 0 1 1 1 1 Chromatin associated protein KTI12 APS_kinase PF01583.15 gi|15669754|ref|NP_248567.1| - 0.00012 21.7 0.0 0.00019 21.1 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase NB-ARC PF00931.17 gi|15669754|ref|NP_248567.1| - 0.00022 20.1 0.5 0.00029 19.8 0.2 1.3 1 1 0 1 1 1 1 NB-ARC domain AAA_14 PF13173.1 gi|15669754|ref|NP_248567.1| - 0.00028 20.7 0.7 0.00076 19.3 0.5 1.9 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.12 gi|15669754|ref|NP_248567.1| - 0.00041 19.7 1.6 0.0023 17.3 0.5 2.3 2 1 0 2 2 2 1 Thymidylate kinase AAA_16 PF13191.1 gi|15669754|ref|NP_248567.1| - 0.00041 20.3 0.0 0.00057 19.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.7 gi|15669754|ref|NP_248567.1| - 0.00046 19.3 0.1 0.01 14.9 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus DUF2075 PF09848.4 gi|15669754|ref|NP_248567.1| - 0.0006 18.8 0.4 0.0012 17.8 0.2 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_10 PF12846.2 gi|15669754|ref|NP_248567.1| - 0.0006 19.3 0.5 0.0014 18.1 0.1 1.5 1 1 0 1 1 1 1 AAA-like domain CbiA PF01656.18 gi|15669754|ref|NP_248567.1| - 0.0007 19.0 3.3 0.011 15.1 0.2 2.2 2 1 1 3 3 3 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.1 gi|15669754|ref|NP_248567.1| - 0.001 18.6 0.2 0.0038 16.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.7 gi|15669754|ref|NP_248567.1| - 0.0011 18.6 0.5 0.0024 17.5 0.2 1.7 2 0 0 2 2 2 1 NACHT domain PhoH PF02562.11 gi|15669754|ref|NP_248567.1| - 0.0018 17.5 0.8 0.0031 16.7 0.6 1.4 1 1 0 1 1 1 1 PhoH-like protein AAA_28 PF13521.1 gi|15669754|ref|NP_248567.1| - 0.0037 17.2 0.2 0.0068 16.3 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|15669754|ref|NP_248567.1| - 0.0042 16.8 0.1 0.0089 15.7 0.1 1.5 1 0 0 1 1 1 1 Part of AAA domain AAA_5 PF07728.9 gi|15669754|ref|NP_248567.1| - 0.0053 16.4 1.7 0.064 12.9 0.1 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) DnaB_C PF03796.10 gi|15669754|ref|NP_248567.1| - 0.0063 15.4 0.1 0.09 11.6 0.0 2.0 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain KdpD PF02702.12 gi|15669754|ref|NP_248567.1| - 0.0079 15.3 1.7 0.068 12.3 1.2 2.0 1 1 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain AAA_33 PF13671.1 gi|15669754|ref|NP_248567.1| - 0.0082 16.0 0.1 0.026 14.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|15669754|ref|NP_248567.1| - 0.01 15.2 2.4 0.033 13.5 0.2 2.1 1 1 0 2 2 2 0 AAA domain ArsA_ATPase PF02374.10 gi|15669754|ref|NP_248567.1| - 0.014 14.4 0.2 0.027 13.5 0.1 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_24 PF13479.1 gi|15669754|ref|NP_248567.1| - 0.014 14.9 2.3 0.081 12.4 0.2 2.3 2 1 0 2 2 2 0 AAA domain Bac_DnaA PF00308.13 gi|15669754|ref|NP_248567.1| - 0.016 14.8 0.6 0.23 11.0 0.1 2.1 2 0 0 2 2 2 0 Bacterial dnaA protein Viral_helicase1 PF01443.13 gi|15669754|ref|NP_248567.1| - 0.017 14.6 0.4 0.16 11.4 0.2 2.2 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.17 gi|15669754|ref|NP_248567.1| - 0.023 14.8 0.1 0.15 12.2 0.0 2.1 2 0 0 2 2 2 0 RNA helicase cobW PF02492.14 gi|15669754|ref|NP_248567.1| - 0.026 13.9 1.2 0.082 12.3 0.8 1.8 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Telomere_Sde2_2 PF13297.1 gi|15669754|ref|NP_248567.1| - 0.032 13.4 0.1 3.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Telomere stability C-terminal Pox_A32 PF04665.7 gi|15669754|ref|NP_248567.1| - 0.033 13.4 1.2 2 7.6 0.1 2.1 2 0 0 2 2 2 0 Poxvirus A32 protein MipZ PF09140.6 gi|15669754|ref|NP_248567.1| - 0.043 12.8 0.4 0.16 11.0 0.3 2.1 1 1 0 1 1 1 0 ATPase MipZ KaiC PF06745.8 gi|15669754|ref|NP_248567.1| - 0.047 12.8 2.2 0.093 11.8 1.6 1.5 1 1 0 1 1 1 0 KaiC AAA_11 PF13086.1 gi|15669754|ref|NP_248567.1| - 0.057 12.9 0.5 0.58 9.6 0.0 2.0 1 1 1 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|15669754|ref|NP_248567.1| - 0.057 13.3 2.4 0.11 12.4 1.6 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase LpxK PF02606.9 gi|15669754|ref|NP_248567.1| - 0.072 12.0 0.6 0.14 11.0 0.4 1.4 1 1 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase ATP-synt_ab PF00006.20 gi|15669754|ref|NP_248567.1| - 0.096 12.1 0.1 0.093 12.2 0.1 1.2 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_31 PF13614.1 gi|15669754|ref|NP_248567.1| - 0.1 12.4 0.0 0.21 11.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|15669754|ref|NP_248567.1| - 0.11 12.0 0.3 0.36 10.3 0.1 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Zeta_toxin PF06414.7 gi|15669754|ref|NP_248567.1| - 0.15 11.1 0.1 0.31 10.1 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin MFS_1 PF07690.11 gi|15669755|ref|NP_248568.1| - 7.6e-57 192.6 57.8 5.6e-54 183.1 31.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|15669755|ref|NP_248568.1| - 2.5e-12 46.1 48.5 8.7e-12 44.3 12.6 3.0 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|15669755|ref|NP_248568.1| - 7.7e-06 24.3 21.6 5.3e-05 21.5 15.0 1.9 1 1 0 1 1 1 1 Transmembrane secretion effector PUCC PF03209.10 gi|15669755|ref|NP_248568.1| - 0.005 15.6 9.5 0.005 15.6 6.6 2.6 2 2 0 2 2 2 2 PUCC protein MFS_2 PF13347.1 gi|15669755|ref|NP_248568.1| - 0.52 8.6 53.9 0.34 9.2 13.9 2.9 1 1 1 3 3 3 0 MFS/sugar transport protein OATP PF03137.15 gi|15669755|ref|NP_248568.1| - 3.1 5.7 30.1 0.045 11.7 4.0 3.7 2 2 1 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family NPCBM_assoc PF10633.4 gi|15669756|ref|NP_248569.1| - 4.6e-14 52.2 0.0 0.014 15.4 0.0 5.1 4 1 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|15669756|ref|NP_248569.1| - 1.7e-11 44.0 21.4 0.00082 19.3 0.2 5.6 3 2 3 6 6 6 4 CARDB DUF11 PF01345.13 gi|15669756|ref|NP_248569.1| - 7.6e-06 25.8 5.4 0.033 14.2 0.0 4.2 4 0 0 4 4 4 2 Domain of unknown function DUF11 DUF4352 PF11611.3 gi|15669756|ref|NP_248569.1| - 1.8e-05 24.8 11.4 0.025 14.7 0.4 4.3 4 1 0 4 4 4 2 Domain of unknown function (DUF4352) TRAP_beta PF05753.9 gi|15669756|ref|NP_248569.1| - 0.00041 19.5 8.8 0.21 10.7 0.1 4.0 5 0 0 5 5 5 2 Translocon-associated protein beta (TRAPB) Transglut_C PF00927.17 gi|15669756|ref|NP_248569.1| - 0.00048 20.1 0.7 9.1 6.3 0.0 4.2 3 1 1 4 4 4 1 Transglutaminase family, C-terminal ig like domain Spo0M PF07070.6 gi|15669756|ref|NP_248569.1| - 0.0017 17.7 0.0 0.15 11.3 0.0 2.7 1 1 1 2 2 2 1 SpoOM protein CBM49 PF09478.5 gi|15669756|ref|NP_248569.1| - 0.0063 16.5 2.5 0.063 13.3 0.1 3.7 3 1 1 4 4 4 1 Carbohydrate binding domain CBM49 Fn3-like PF14310.1 gi|15669756|ref|NP_248569.1| - 0.033 14.1 0.0 15 5.5 0.0 3.6 3 0 0 3 3 3 0 Fibronectin type III-like domain Arrestin_C PF02752.17 gi|15669756|ref|NP_248569.1| - 0.037 14.1 10.7 0.64 10.1 1.0 3.8 3 1 0 3 3 3 0 Arrestin (or S-antigen), C-terminal domain AP3B1_C PF14796.1 gi|15669756|ref|NP_248569.1| - 0.057 13.1 0.1 7.2 6.2 0.0 3.3 3 0 0 3 3 3 0 Clathrin-adaptor complex-3 beta-1 subunit C-terminal DUF2393 PF09624.5 gi|15669756|ref|NP_248569.1| - 0.063 12.8 17.0 0.61 9.6 0.1 5.4 4 1 1 5 5 5 0 Protein of unknown function (DUF2393) BACON PF13004.2 gi|15669756|ref|NP_248569.1| - 0.98 9.6 11.8 29 4.9 3.0 5.0 3 2 0 3 3 2 0 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal Peptidase_M73 PF12389.3 gi|15669756|ref|NP_248569.1| - 1.3 8.4 7.0 2.1 7.7 1.9 3.1 3 1 1 4 4 4 0 Camelysin metallo-endopeptidase MMPL PF03176.10 gi|15669757|ref|NP_248570.1| - 2.8e-37 128.2 0.1 3.6e-37 127.8 0.1 1.2 1 0 0 1 1 1 1 MMPL family Patched PF02460.13 gi|15669757|ref|NP_248570.1| - 6.4e-10 37.6 6.7 7.4e-09 34.1 3.3 2.0 2 0 0 2 2 2 2 Patched family Sterol-sensing PF12349.3 gi|15669757|ref|NP_248570.1| - 9.2e-08 31.6 0.5 9.2e-08 31.6 0.4 1.6 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.11 gi|15669757|ref|NP_248570.1| - 1e-06 28.1 5.9 1.9e-06 27.2 4.1 1.4 1 0 0 1 1 1 1 Protein export membrane protein ACR_tran PF00873.14 gi|15669757|ref|NP_248570.1| - 9.1e-06 23.3 6.2 1.9e-05 22.3 4.3 1.5 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family UPF0104 PF03706.8 gi|15669757|ref|NP_248570.1| - 3.7 6.7 12.6 0.028 13.6 0.9 2.5 2 1 0 3 3 3 0 Uncharacterised protein family (UPF0104) HTH_5 PF01022.15 gi|15669758|ref|NP_248571.1| - 8.9e-14 50.8 0.3 6.2e-13 48.1 0.1 2.4 2 1 1 3 3 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|15669758|ref|NP_248571.1| - 1.5e-09 37.3 1.3 7.7e-09 35.1 0.1 2.2 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|15669758|ref|NP_248571.1| - 7.9e-09 35.0 0.0 2.3e-08 33.5 0.0 1.8 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|15669758|ref|NP_248571.1| - 6.1e-07 28.7 0.0 6.1e-07 28.7 0.0 3.2 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|15669758|ref|NP_248571.1| - 9.3e-07 28.5 0.0 2.3e-06 27.3 0.0 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15669758|ref|NP_248571.1| - 9.2e-06 25.2 0.2 4.2e-05 23.1 0.0 2.2 2 0 0 2 2 2 1 HTH domain MarR PF01047.17 gi|15669758|ref|NP_248571.1| - 1.5e-05 24.5 0.4 5.6e-05 22.7 0.0 2.2 3 0 0 3 3 2 1 MarR family HTH_IclR PF09339.5 gi|15669758|ref|NP_248571.1| - 1.9e-05 24.1 0.0 0.00026 20.4 0.0 2.5 2 1 1 3 3 3 1 IclR helix-turn-helix domain Fe_dep_repress PF01325.14 gi|15669758|ref|NP_248571.1| - 0.00026 20.8 0.0 0.00074 19.4 0.0 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.1 gi|15669758|ref|NP_248571.1| - 0.00029 21.0 0.0 0.00086 19.5 0.0 1.8 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|15669758|ref|NP_248571.1| - 0.00051 20.0 0.5 0.0011 18.9 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain PadR PF03551.9 gi|15669758|ref|NP_248571.1| - 0.00095 18.8 1.9 0.027 14.2 0.0 2.9 2 2 1 3 3 3 1 Transcriptional regulator PadR-like family DUF4423 PF14394.1 gi|15669758|ref|NP_248571.1| - 0.0027 17.2 1.3 0.005 16.4 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) HTH_36 PF13730.1 gi|15669758|ref|NP_248571.1| - 0.0041 17.2 1.6 0.0048 16.9 0.1 2.0 2 2 0 2 2 2 1 Helix-turn-helix domain HTH_41 PF14502.1 gi|15669758|ref|NP_248571.1| - 0.0058 16.2 0.7 0.024 14.2 0.0 2.4 2 1 1 3 3 3 1 Helix-turn-helix domain DUF2203 PF09969.4 gi|15669758|ref|NP_248571.1| - 0.0092 16.2 1.2 1.4 9.1 0.0 2.1 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2203) Rrf2 PF02082.15 gi|15669758|ref|NP_248571.1| - 0.018 15.1 0.2 0.074 13.1 0.0 2.2 3 0 0 3 3 2 0 Transcriptional regulator FUR PF01475.14 gi|15669758|ref|NP_248571.1| - 0.019 14.9 0.4 0.035 14.0 0.3 1.7 1 1 0 1 1 1 0 Ferric uptake regulator family B-block_TFIIIC PF04182.7 gi|15669758|ref|NP_248571.1| - 0.024 14.4 0.0 0.044 13.6 0.0 1.5 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC DUF387 PF04079.11 gi|15669758|ref|NP_248571.1| - 0.027 13.8 0.7 0.091 12.1 0.0 2.0 1 1 0 2 2 2 0 Putative transcriptional regulators (Ypuh-like) PAX PF00292.13 gi|15669758|ref|NP_248571.1| - 0.029 14.0 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 'Paired box' domain K-box PF01486.12 gi|15669758|ref|NP_248571.1| - 0.041 13.6 1.1 0.041 13.6 0.8 1.8 2 0 0 2 2 1 0 K-box region HHH_5 PF14520.1 gi|15669758|ref|NP_248571.1| - 0.056 13.6 3.6 1 9.5 2.2 3.0 1 1 0 1 1 1 0 Helix-hairpin-helix domain HTH_12 PF08461.5 gi|15669758|ref|NP_248571.1| - 0.084 12.6 2.0 0.28 10.9 0.0 2.6 2 2 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_23 PF13384.1 gi|15669758|ref|NP_248571.1| - 0.088 12.4 0.0 0.37 10.4 0.0 2.1 3 0 0 3 3 1 0 Homeodomain-like domain NusB PF01029.13 gi|15669758|ref|NP_248571.1| - 0.24 11.3 3.3 1.9 8.4 0.8 2.1 2 0 0 2 2 2 0 NusB family DUF2129 PF09902.4 gi|15669758|ref|NP_248571.1| - 0.48 10.2 2.3 12 5.8 0.0 3.2 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2129) DUF3782 PF12644.2 gi|15669758|ref|NP_248571.1| - 6.4 6.6 10.6 1.7 8.4 4.5 2.2 3 1 0 3 3 1 0 Protein of unknown function (DUF3782) RNA_binding PF01877.12 gi|15669759|ref|NP_248572.1| - 8.3e-28 96.8 0.6 8.3e-28 96.8 0.4 1.7 2 0 0 2 2 2 1 RNA binding LepA_C PF06421.7 gi|15669759|ref|NP_248572.1| - 0.054 13.3 0.4 0.27 11.1 0.0 2.0 1 1 1 2 2 2 0 GTP-binding protein LepA C-terminus FokI_C PF02980.11 gi|15669759|ref|NP_248572.1| - 0.063 12.9 0.1 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 Restriction endonuclease FokI, catalytic domain RNA_GG_bind PF10258.4 gi|15669759|ref|NP_248572.1| - 0.12 12.0 1.5 8.7 6.1 0.0 2.5 1 1 1 2 2 2 0 PHAX RNA-binding domain DUF3983 PF13137.1 gi|15669759|ref|NP_248572.1| - 0.18 11.5 0.2 0.18 11.5 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3983) DUF87 PF01935.12 gi|15669760|ref|NP_248573.1| - 2.8e-53 181.1 3.6 4.8e-53 180.3 2.5 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|15669760|ref|NP_248573.1| - 3.8e-18 65.9 0.8 1.7e-16 60.5 0.6 2.1 1 1 0 1 1 1 1 AAA-like domain HAS-barrel PF09378.5 gi|15669760|ref|NP_248573.1| - 5.6e-12 45.4 0.8 5.6e-12 45.4 0.5 2.0 2 0 0 2 2 2 1 HAS barrel domain DUF853 PF05872.7 gi|15669760|ref|NP_248573.1| - 4.3e-10 38.5 0.0 1.5e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.4 gi|15669760|ref|NP_248573.1| - 1.5e-05 23.7 0.0 8.8e-05 21.2 0.0 2.0 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.13 gi|15669760|ref|NP_248573.1| - 0.00014 21.4 1.5 0.27 10.6 0.0 2.7 2 1 0 2 2 2 2 FtsK/SpoIIIE family CbiA PF01656.18 gi|15669760|ref|NP_248573.1| - 0.02 14.2 0.0 0.04 13.3 0.0 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP-synt_E_2 PF08112.6 gi|15669760|ref|NP_248573.1| - 4.7 7.3 7.8 1.8 8.7 0.5 3.4 3 0 0 3 3 3 0 ATP synthase epsilon subunit DUF4212 PF13937.1 gi|15669761|ref|NP_248574.1| - 0.067 13.2 0.1 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) DUF1664 PF07889.7 gi|15669761|ref|NP_248574.1| - 0.43 10.3 3.0 0.97 9.2 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) DUF771 PF05595.6 gi|15669762|ref|NP_248575.1| - 0.0062 16.4 3.3 0.021 14.7 0.3 2.8 2 1 1 3 3 3 1 Domain of unknown function (DUF771) Chordopox_A35R PF05989.7 gi|15669762|ref|NP_248575.1| - 0.011 15.3 0.1 0.017 14.7 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus A35R protein FERM_C PF09380.5 gi|15669762|ref|NP_248575.1| - 0.088 13.0 1.0 0.21 11.8 0.7 1.6 1 0 0 1 1 1 0 FERM C-terminal PH-like domain LigT_PEase PF02834.11 gi|15669763|ref|NP_248576.1| - 2.3e-36 123.6 0.0 1.1e-17 63.7 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.4 gi|15669763|ref|NP_248576.1| - 4.7e-12 46.0 1.6 1.2e-11 44.7 1.1 1.6 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.1 gi|15669763|ref|NP_248576.1| - 2.5e-10 40.2 0.0 3e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily DUF2361 PF10153.4 gi|15669763|ref|NP_248576.1| - 0.065 13.4 4.0 0.13 12.4 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2361) Dpoe2NT PF12213.3 gi|15669763|ref|NP_248576.1| - 0.068 13.0 0.2 0.14 12.0 0.2 1.5 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal TA0956 PF11513.3 gi|15669763|ref|NP_248576.1| - 0.28 11.2 7.8 8.2 6.5 0.1 3.2 2 1 1 3 3 3 0 Thermoplasma acidophilum protein TA0956 B5 PF03484.10 gi|15669763|ref|NP_248576.1| - 1.7 8.5 4.0 7.5 6.4 0.5 2.8 2 1 0 2 2 2 0 tRNA synthetase B5 domain CbiM PF01891.11 gi|15669764|ref|NP_248577.1| - 5.4e-64 215.5 10.3 6e-64 215.4 7.1 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region 5TM-5TMR_LYT PF07694.7 gi|15669764|ref|NP_248577.1| - 0.76 9.0 14.1 2 7.7 9.8 1.8 1 1 0 1 1 1 0 5TMR of 5TMR-LYT 7TMR-DISM_7TM PF07695.6 gi|15669764|ref|NP_248577.1| - 0.9 9.1 10.1 0.17 11.5 0.4 2.4 2 1 0 2 2 2 0 7TM diverse intracellular signalling DUF3816 PF12822.2 gi|15669764|ref|NP_248577.1| - 2.2 8.1 25.7 1 9.2 15.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3816) Na_Ca_ex PF01699.19 gi|15669764|ref|NP_248577.1| - 7.1 6.2 12.8 32 4.1 7.9 2.6 1 1 1 2 2 2 0 Sodium/calcium exchanger protein PDGLE PF13190.1 gi|15669765|ref|NP_248578.1| - 3.1e-16 58.8 0.5 3.7e-16 58.5 0.4 1.1 1 0 0 1 1 1 1 PDGLE domain DUF3309 PF11752.3 gi|15669765|ref|NP_248578.1| - 0.0051 16.5 7.3 0.17 11.6 0.4 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3309) CbiQ PF02361.11 gi|15669766|ref|NP_248579.1| - 5e-50 170.1 9.0 8.3e-50 169.4 6.3 1.3 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.22 gi|15669767|ref|NP_248580.1| - 4.8e-31 107.8 0.0 6.9e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|15669767|ref|NP_248580.1| - 2.5e-18 67.0 2.5 2.2e-16 60.6 0.2 2.9 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|15669767|ref|NP_248580.1| - 2e-11 43.5 0.0 3.9e-11 42.6 0.0 1.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|15669767|ref|NP_248580.1| - 9.4e-08 31.5 2.5 0.0048 16.0 0.0 2.4 2 1 1 3 3 3 2 AAA ATPase domain AAA_23 PF13476.1 gi|15669767|ref|NP_248580.1| - 2.1e-06 28.1 0.1 3.2e-06 27.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 gi|15669767|ref|NP_248580.1| - 1e-05 24.2 0.1 0.066 11.6 0.0 2.5 1 1 2 3 3 3 2 AAA domain AAA_14 PF13173.1 gi|15669767|ref|NP_248580.1| - 0.00027 20.8 1.2 0.012 15.5 0.0 2.5 2 1 0 2 2 2 1 AAA domain SbcCD_C PF13558.1 gi|15669767|ref|NP_248580.1| - 0.00069 19.4 0.0 0.019 14.8 0.0 2.5 2 1 0 2 2 1 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.1 gi|15669767|ref|NP_248580.1| - 0.00081 19.7 0.1 0.2 11.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|15669767|ref|NP_248580.1| - 0.00084 19.1 0.6 0.0053 16.4 0.1 2.2 1 1 1 2 2 2 1 Archaeal ATPase AAA_29 PF13555.1 gi|15669767|ref|NP_248580.1| - 0.0018 17.7 0.0 0.0034 16.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|15669767|ref|NP_248580.1| - 0.011 14.9 0.0 0.023 13.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_28 PF13521.1 gi|15669767|ref|NP_248580.1| - 0.016 15.2 0.1 0.038 13.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain Cytomega_gL PF01801.11 gi|15669767|ref|NP_248580.1| - 0.016 14.7 0.4 0.03 13.7 0.1 1.6 2 0 0 2 2 2 0 Cytomegalovirus glycoprotein L AAA_24 PF13479.1 gi|15669767|ref|NP_248580.1| - 0.017 14.7 0.1 0.07 12.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|15669767|ref|NP_248580.1| - 0.018 15.8 0.3 0.042 14.6 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|15669767|ref|NP_248580.1| - 0.031 14.4 0.1 0.44 10.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.1 gi|15669767|ref|NP_248580.1| - 0.035 13.8 0.4 0.064 13.0 0.0 1.6 2 0 0 2 2 1 0 Part of AAA domain NACHT PF05729.7 gi|15669767|ref|NP_248580.1| - 0.046 13.3 0.1 0.091 12.4 0.1 1.5 1 0 0 1 1 1 0 NACHT domain UPF0079 PF02367.12 gi|15669767|ref|NP_248580.1| - 0.05 13.2 0.1 0.17 11.5 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 AAA_16 PF13191.1 gi|15669767|ref|NP_248580.1| - 0.051 13.5 0.0 0.48 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain KaiC PF06745.8 gi|15669767|ref|NP_248580.1| - 0.075 12.1 0.0 5.5 6.0 0.0 2.3 2 0 0 2 2 2 0 KaiC ABC_ATPase PF09818.4 gi|15669767|ref|NP_248580.1| - 0.11 11.0 0.0 1.4 7.4 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_30 PF13604.1 gi|15669767|ref|NP_248580.1| - 0.15 11.6 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|15669767|ref|NP_248580.1| - 0.16 11.8 0.0 0.58 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|15669767|ref|NP_248580.1| - 0.18 11.5 1.0 0.39 10.4 0.1 2.0 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF1998 PF09369.5 gi|15669768|ref|NP_248581.1| - 2.1e-17 63.4 0.0 2.6e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) DEAD PF00270.24 gi|15669770|ref|NP_248583.1| - 2.2e-27 95.6 0.0 6.3e-27 94.1 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|15669770|ref|NP_248583.1| - 2.6e-17 62.4 0.0 4.6e-16 58.4 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Helicase_C_2 PF13307.1 gi|15669770|ref|NP_248583.1| - 0.034 14.1 0.0 6.4 6.7 0.0 2.6 2 0 0 2 2 2 0 Helicase C-terminal domain AAA_11 PF13086.1 gi|15669770|ref|NP_248583.1| - 0.096 12.2 0.3 6.9 6.1 0.0 2.6 2 1 1 3 3 3 0 AAA domain GATase PF00117.23 gi|15669771|ref|NP_248584.1| - 6.6e-48 162.7 0.3 7.3e-48 162.5 0.2 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|15669771|ref|NP_248584.1| - 8.6e-18 64.5 0.2 5.4e-16 58.7 0.0 2.2 1 1 1 2 2 2 2 Peptidase C26 LemA PF04011.7 gi|15669772|ref|NP_248585.1| - 6.2e-70 234.1 6.3 7e-70 233.9 4.4 1.0 1 0 0 1 1 1 1 LemA family DUF948 PF06103.6 gi|15669772|ref|NP_248585.1| - 0.0099 15.7 8.6 0.8 9.6 0.1 2.9 1 1 2 3 3 3 2 Bacterial protein of unknown function (DUF948) TcdB_N PF12918.2 gi|15669772|ref|NP_248585.1| - 0.014 15.4 1.0 1.8 8.6 0.1 2.8 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain Hemerythrin PF01814.18 gi|15669772|ref|NP_248585.1| - 0.034 14.3 0.0 0.048 13.8 0.0 1.1 1 0 0 1 1 1 0 Hemerythrin HHE cation binding domain TMF_DNA_bd PF12329.3 gi|15669772|ref|NP_248585.1| - 0.048 13.4 5.7 2 8.2 0.1 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding RNA_pol_Rpb4 PF03874.11 gi|15669772|ref|NP_248585.1| - 0.052 13.5 2.2 0.3 11.0 0.4 2.1 1 1 1 2 2 2 0 RNA polymerase Rpb4 Baculo_PEP_C PF04513.7 gi|15669772|ref|NP_248585.1| - 0.13 12.1 5.4 0.28 11.0 2.5 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4446 PF14584.1 gi|15669772|ref|NP_248585.1| - 0.13 12.0 7.2 0.34 10.7 1.5 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) MutS_III PF05192.13 gi|15669772|ref|NP_248585.1| - 0.13 12.0 0.5 0.16 11.7 0.4 1.1 1 0 0 1 1 1 0 MutS domain III LUC7 PF03194.10 gi|15669772|ref|NP_248585.1| - 0.18 11.2 1.7 0.24 10.8 1.2 1.1 1 0 0 1 1 1 0 LUC7 N_terminus Col_cuticle_N PF01484.12 gi|15669772|ref|NP_248585.1| - 0.3 10.8 1.4 0.47 10.1 0.2 2.0 2 0 0 2 2 1 0 Nematode cuticle collagen N-terminal domain DUF2779 PF11074.3 gi|15669772|ref|NP_248585.1| - 0.3 11.1 3.7 6.4 6.8 2.5 2.3 1 1 0 1 1 1 0 Domain of unknown function(DUF2779) Spectrin PF00435.16 gi|15669772|ref|NP_248585.1| - 0.32 11.2 1.9 7.2 6.9 0.2 2.3 1 1 1 2 2 2 0 Spectrin repeat Cauli_AT PF03233.8 gi|15669772|ref|NP_248585.1| - 0.43 10.2 3.9 0.84 9.3 2.6 1.6 1 1 0 1 1 1 0 Aphid transmission protein IncA PF04156.9 gi|15669772|ref|NP_248585.1| - 0.89 9.1 11.1 4.6 6.7 7.7 2.1 1 1 0 1 1 1 0 IncA protein TBPIP PF07106.8 gi|15669772|ref|NP_248585.1| - 0.9 9.0 7.8 1.8 8.0 1.6 2.1 1 1 2 3 3 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF1517 PF07466.6 gi|15669772|ref|NP_248585.1| - 2.1 7.2 8.5 0.7 8.8 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1517) DUF2207 PF09972.4 gi|15669773|ref|NP_248586.1| - 6.1e-97 325.3 25.0 6.1e-97 325.3 17.3 1.6 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) Fork_head PF00250.13 gi|15669773|ref|NP_248586.1| - 0.014 15.4 0.1 0.046 13.7 0.1 1.8 1 0 0 1 1 1 0 Fork head domain DUF4476 PF14771.1 gi|15669773|ref|NP_248586.1| - 0.07 13.1 0.3 0.16 12.0 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) TP_methylase PF00590.15 gi|15669774|ref|NP_248587.1| - 1.8e-51 174.8 0.1 2.1e-51 174.5 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|15669774|ref|NP_248587.1| - 2.6e-06 27.6 0.4 1.5e-05 25.2 0.2 2.0 1 1 0 1 1 1 1 Radical SAM superfamily TPP_enzyme_M PF00205.17 gi|15669774|ref|NP_248587.1| - 0.0071 16.1 0.0 0.016 14.9 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain HU-DNA_bdg PF14848.1 gi|15669774|ref|NP_248587.1| - 0.069 12.8 2.3 1.2 8.8 0.1 3.0 2 1 1 3 3 3 0 DNA-binding domain PLU-1 PF08429.6 gi|15669775|ref|NP_248588.1| - 0.027 13.3 2.3 0.028 13.3 1.6 1.0 1 0 0 1 1 1 0 PLU-1-like protein COG2 PF06148.6 gi|15669775|ref|NP_248588.1| - 0.066 13.0 2.9 0.073 12.9 2.0 1.2 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Viral_P18 PF04521.8 gi|15669775|ref|NP_248588.1| - 0.55 9.6 2.9 0.63 9.4 2.0 1.1 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein DUF2304 PF10066.4 gi|15669776|ref|NP_248589.1| - 5.8e-43 145.4 5.3 6.5e-43 145.2 3.7 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Bax1-I PF01027.15 gi|15669776|ref|NP_248589.1| - 0.0071 15.9 4.0 0.0086 15.7 2.8 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Spore_YabQ PF09578.5 gi|15669776|ref|NP_248589.1| - 0.015 15.1 3.3 0.015 15.1 2.3 2.1 2 0 0 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) Cytochrom_B_C PF00032.12 gi|15669776|ref|NP_248589.1| - 0.46 10.7 8.2 0.25 11.5 2.4 2.0 1 1 1 2 2 2 0 Cytochrome b(C-terminal)/b6/petD YvrJ PF12841.2 gi|15669776|ref|NP_248589.1| - 1.9 7.8 6.2 0.12 11.6 0.5 1.8 2 0 0 2 2 2 0 YvrJ protein family OTCace_N PF02729.16 gi|15669777|ref|NP_248590.1| - 3.9e-50 169.2 0.0 6.6e-50 168.4 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|15669777|ref|NP_248590.1| - 3.1e-33 114.8 0.0 4.7e-33 114.2 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TatD_DNase PF01026.16 gi|15669778|ref|NP_248591.1| - 8.2e-63 211.9 0.9 9.8e-63 211.7 0.6 1.0 1 0 0 1 1 1 1 TatD related DNase Transketolase_C PF02780.15 gi|15669778|ref|NP_248591.1| - 0.049 13.5 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Transketolase, C-terminal domain CesA PF11439.3 gi|15669778|ref|NP_248591.1| - 0.07 13.0 0.3 0.07 13.0 0.2 2.4 2 1 0 2 2 2 0 Type III secretion system filament chaperone CesA UPF0066 PF01980.11 gi|15669779|ref|NP_248592.1| - 6.1e-35 119.7 0.0 7e-35 119.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0066 DeoC PF01791.4 gi|15669781|ref|NP_248594.1| - 4.6e-37 127.5 0.0 5.7e-37 127.2 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Carb_kinase PF01256.12 gi|15669782|ref|NP_248595.1| - 2.4e-71 239.8 0.0 4.2e-71 239.0 0.0 1.4 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|15669782|ref|NP_248595.1| - 2.9e-30 105.0 0.0 5.6e-30 104.1 0.0 1.4 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.10 gi|15669782|ref|NP_248595.1| - 0.098 11.8 0.1 0.33 10.0 0.0 1.8 2 0 0 2 2 2 0 Hydroxyethylthiazole kinase family PHP PF02811.14 gi|15669783|ref|NP_248596.1| - 3.2e-15 56.3 0.0 1.5e-14 54.1 0.0 1.8 1 1 0 1 1 1 1 PHP domain DHH PF01368.15 gi|15669783|ref|NP_248596.1| - 0.012 15.2 0.0 0.03 13.9 0.0 1.7 2 0 0 2 2 2 0 DHH family PHP_C PF13263.1 gi|15669784|ref|NP_248597.1| - 5.7e-05 22.5 0.0 9.7e-05 21.7 0.0 1.4 1 0 0 1 1 1 1 PHP-associated Gate PF07670.9 gi|15669785|ref|NP_248598.1| - 0.00018 21.3 2.1 0.00018 21.3 1.5 2.9 2 1 0 2 2 2 2 Nucleoside recognition DUF2755 PF10954.3 gi|15669785|ref|NP_248598.1| - 0.053 13.2 1.2 0.097 12.3 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2755) SHOCT PF09851.4 gi|15669785|ref|NP_248598.1| - 0.25 10.8 0.8 0.53 9.8 0.2 1.8 2 0 0 2 2 2 0 Short C-terminal domain DUF4149 PF13664.1 gi|15669785|ref|NP_248598.1| - 1.1 9.3 9.4 4.8 7.2 2.1 2.6 2 2 0 2 2 2 0 Domain of unknown function (DUF4149) PMT PF02366.13 gi|15669786|ref|NP_248599.1| - 0.012 14.9 0.6 0.015 14.7 0.4 1.2 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase PHO4 PF01384.15 gi|15669786|ref|NP_248599.1| - 0.077 11.6 0.5 0.09 11.4 0.3 1.1 1 0 0 1 1 1 0 Phosphate transporter family ATPase_gene1 PF09527.5 gi|15669786|ref|NP_248599.1| - 0.79 9.5 8.9 2.6 7.9 1.8 2.3 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit (ATPase_gene1) SAICAR_synt PF01259.13 gi|15669787|ref|NP_248601.1| - 3.1e-62 209.9 0.6 3.8e-62 209.6 0.4 1.0 1 0 0 1 1 1 1 SAICAR synthetase IF2_N PF04760.10 gi|15669787|ref|NP_248601.1| - 0.023 14.3 0.8 0.093 12.3 0.6 2.0 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region Pox_J1 PF03338.10 gi|15669787|ref|NP_248601.1| - 0.044 13.4 0.0 0.088 12.4 0.0 1.4 1 0 0 1 1 1 0 Poxvirus J1 protein PurS PF02700.9 gi|15669788|ref|NP_248602.1| - 2.6e-32 110.5 2.5 2.9e-32 110.4 1.7 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase HAD PF12710.2 gi|15669789|ref|NP_248603.1| - 9.7e-20 71.5 0.1 1.2e-19 71.2 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|15669789|ref|NP_248603.1| - 3.2e-15 56.4 3.9 2.8e-11 43.4 0.2 3.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|15669789|ref|NP_248603.1| - 1.3e-13 51.9 4.8 3.8e-12 47.0 3.3 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|15669789|ref|NP_248603.1| - 2.2e-11 43.3 0.1 1.2e-09 37.7 0.1 2.1 1 1 0 1 1 1 1 Putative Phosphatase HAD_2 PF13419.1 gi|15669789|ref|NP_248603.1| - 4e-11 43.4 0.0 8e-11 42.4 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|15669789|ref|NP_248603.1| - 0.014 14.7 0.0 0.34 10.1 0.0 2.1 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase Hydrolase_like PF13242.1 gi|15669789|ref|NP_248603.1| - 0.018 14.7 0.0 0.039 13.6 0.0 1.5 1 0 0 1 1 1 0 HAD-hyrolase-like DUF705 PF05152.7 gi|15669789|ref|NP_248603.1| - 0.068 12.1 0.0 1.2 7.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF705) UPF0104 PF03706.8 gi|15669790|ref|NP_248604.1| - 1.1e-46 159.4 28.6 1.5e-46 159.0 19.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Iso_dh PF00180.15 gi|15669791|ref|NP_248605.1| - 3e-107 358.5 0.1 3.5e-107 358.3 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DnaB_2 PF07261.6 gi|15669791|ref|NP_248605.1| - 0.00039 19.9 0.2 2.3 7.8 0.0 3.3 3 0 0 3 3 3 2 Replication initiation and membrane attachment SHMT PF00464.14 gi|15669792|ref|NP_248606.1| - 9.4e-83 277.7 0.0 1.2e-82 277.4 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.16 gi|15669792|ref|NP_248606.1| - 4.3e-07 29.3 0.0 6e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|15669792|ref|NP_248606.1| - 1.5e-06 27.4 0.0 4.2e-06 25.9 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.8 gi|15669792|ref|NP_248606.1| - 0.0016 17.2 0.0 0.005 15.6 0.0 1.8 2 0 0 2 2 2 1 L-seryl-tRNA selenium transferase Thiolase_C PF02803.13 gi|15669792|ref|NP_248606.1| - 0.012 14.9 0.1 0.032 13.6 0.0 1.7 2 0 0 2 2 2 0 Thiolase, C-terminal domain DBI_PRT PF02277.12 gi|15669794|ref|NP_248608.1| - 8.3e-47 159.8 0.5 2.2e-46 158.4 0.3 1.6 1 1 1 2 2 2 1 Phosphoribosyltransferase PAPS_reduct PF01507.14 gi|15669795|ref|NP_248609.1| - 3.2e-06 27.0 0.0 5e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.12 gi|15669795|ref|NP_248609.1| - 0.00022 20.2 0.0 0.00062 18.7 0.0 1.6 2 0 0 2 2 2 1 NAD synthase ATP_bind_3 PF01171.15 gi|15669795|ref|NP_248609.1| - 0.00079 18.9 0.0 0.0013 18.2 0.0 1.4 1 0 0 1 1 1 1 PP-loop family ATP_bind_4 PF01902.12 gi|15669795|ref|NP_248609.1| - 0.002 17.5 0.1 0.0032 16.8 0.0 1.3 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|15669795|ref|NP_248609.1| - 0.011 15.0 0.0 0.018 14.3 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15669795|ref|NP_248609.1| - 0.035 12.6 0.0 0.054 12.0 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase Arginosuc_synth PF00764.14 gi|15669795|ref|NP_248609.1| - 0.064 12.2 0.0 0.091 11.7 0.0 1.2 1 0 0 1 1 1 0 Arginosuccinate synthase Asn_synthase PF00733.16 gi|15669795|ref|NP_248609.1| - 0.1 12.1 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase DUF46 PF01864.12 gi|15669796|ref|NP_248610.1| - 1.5e-87 291.9 10.8 1.8e-87 291.7 7.5 1.0 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|15669796|ref|NP_248610.1| - 4.2e-05 23.3 9.1 8.9e-05 22.2 2.6 2.2 1 1 1 2 2 2 2 Cytidylyltransferase family ACT PF01842.20 gi|15669797|ref|NP_248611.1| - 1.1e-12 47.0 2.2 8.9e-12 44.2 0.1 2.7 3 0 0 3 3 3 1 ACT domain ACT_4 PF13291.1 gi|15669797|ref|NP_248611.1| - 1.3e-07 31.8 0.2 3.5e-07 30.4 0.1 1.7 2 0 0 2 2 2 1 ACT domain Saccharop_dh_N PF04455.7 gi|15669797|ref|NP_248611.1| - 0.024 14.7 2.5 0.091 12.8 0.5 2.5 1 1 2 3 3 3 0 LOR/SDH bifunctional enzyme conserved region DUF4265 PF14085.1 gi|15669797|ref|NP_248611.1| - 0.067 12.9 0.2 0.16 11.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4265) DUF356 PF04009.7 gi|15669797|ref|NP_248611.1| - 0.083 12.9 0.7 0.18 11.9 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF356) ACT_6 PF13740.1 gi|15669797|ref|NP_248611.1| - 0.084 12.5 0.0 19 5.0 0.0 2.6 2 1 0 2 2 2 0 ACT domain TBPIP PF07106.8 gi|15669797|ref|NP_248611.1| - 0.095 12.2 1.6 0.18 11.3 1.1 1.4 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Thr_dehydrat_C PF00585.13 gi|15669797|ref|NP_248611.1| - 0.13 11.9 0.0 0.46 10.1 0.0 1.8 2 0 0 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase Homoserine_dh PF00742.14 gi|15669798|ref|NP_248612.1| - 6.9e-60 201.7 3.1 1.7e-59 200.4 0.3 2.4 2 1 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|15669798|ref|NP_248612.1| - 4.3e-16 59.3 0.2 2e-15 57.1 0.1 2.0 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|15669798|ref|NP_248612.1| - 1.4e-06 28.1 1.6 5.2e-06 26.2 1.0 2.0 1 1 1 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Gp_dh_N PF00044.19 gi|15669798|ref|NP_248612.1| - 0.00021 21.3 1.1 0.0033 17.4 0.8 2.4 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.17 gi|15669798|ref|NP_248612.1| - 0.017 15.5 0.2 0.046 14.2 0.1 1.8 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold 3HCDH_N PF02737.13 gi|15669798|ref|NP_248612.1| - 0.03 13.9 1.1 0.081 12.5 0.8 1.7 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATLF PF07737.6 gi|15669798|ref|NP_248612.1| - 0.036 13.4 0.2 0.062 12.6 0.1 1.4 1 0 0 1 1 1 0 Anthrax toxin lethal factor, N- and C-terminal domain Saccharop_dh PF03435.13 gi|15669798|ref|NP_248612.1| - 0.044 12.7 0.1 0.064 12.2 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase TrkA_N PF02254.13 gi|15669798|ref|NP_248612.1| - 0.051 13.5 0.2 0.17 11.8 0.1 2.0 1 1 0 1 1 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.14 gi|15669798|ref|NP_248612.1| - 0.16 11.1 1.1 4.2 6.4 0.2 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Rib_5-P_isom_A PF06026.9 gi|15669799|ref|NP_248613.1| - 6.9e-62 207.7 1.7 8.6e-62 207.4 1.2 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|15669799|ref|NP_248613.1| - 7.9e-11 41.8 0.1 7.4e-07 28.9 0.0 2.3 1 1 1 2 2 2 2 DeoR C terminal sensor domain Pro_Al_protease PF02983.9 gi|15669799|ref|NP_248613.1| - 0.053 13.4 0.0 6.2 6.8 0.0 2.4 2 0 0 2 2 2 0 Alpha-lytic protease prodomain ADP_PFK_GK PF04587.10 gi|15669800|ref|NP_248614.1| - 1.9e-181 603.1 4.6 2.2e-181 602.9 3.2 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region DUF1548 PF07579.6 gi|15669800|ref|NP_248614.1| - 0.032 14.3 0.4 0.55 10.3 0.1 2.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1548) Dpoe2NT PF12213.3 gi|15669800|ref|NP_248614.1| - 0.22 11.4 2.5 0.76 9.7 0.1 3.0 3 0 0 3 3 3 0 DNA polymerases epsilon N terminal PGI PF00342.14 gi|15669801|ref|NP_248615.1| - 2.1e-57 194.6 0.6 2.6e-57 194.3 0.4 1.1 1 0 0 1 1 1 1 Phosphoglucose isomerase Glyco_transf_5 PF08323.6 gi|15669802|ref|NP_248616.1| - 1.1e-30 106.8 0.0 2.4e-30 105.8 0.0 1.5 1 0 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.15 gi|15669802|ref|NP_248616.1| - 8.9e-22 77.3 0.0 1.8e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|15669802|ref|NP_248616.1| - 1.7e-09 37.9 0.0 3.6e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|15669802|ref|NP_248616.1| - 0.0053 16.9 0.0 0.0085 16.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|15669803|ref|NP_248617.1| - 3.6e-53 179.5 0.0 5.2e-53 178.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|15669803|ref|NP_248617.1| - 1.5e-26 93.3 1.1 1.9e-13 50.5 0.2 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.1 gi|15669803|ref|NP_248617.1| - 1.4e-22 80.5 0.0 6.5e-20 71.8 0.0 3.0 3 0 0 3 3 3 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|15669803|ref|NP_248617.1| - 3.7e-22 78.9 0.0 7.5e-22 77.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|15669803|ref|NP_248617.1| - 7.8e-16 58.2 0.0 3.3e-15 56.2 0.0 2.0 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|15669803|ref|NP_248617.1| - 6.5e-13 48.7 0.3 3.4e-11 43.1 0.0 2.4 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|15669803|ref|NP_248617.1| - 3.4e-11 43.2 0.0 7.6e-11 42.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_20 PF00982.16 gi|15669803|ref|NP_248617.1| - 0.00075 18.0 0.0 0.097 11.1 0.0 2.6 3 0 0 3 3 3 2 Glycosyltransferase family 20 DUF2582 PF10771.4 gi|15669804|ref|NP_248618.1| - 9.5e-22 76.6 2.2 1e-21 76.5 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2582) Pox_I6 PF04595.8 gi|15669804|ref|NP_248618.1| - 0.032 12.9 0.0 0.033 12.9 0.0 1.0 1 0 0 1 1 1 0 Poxvirus I6-like family UPF0180 PF03698.8 gi|15669804|ref|NP_248618.1| - 0.074 12.9 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) Arch_ATPase PF01637.13 gi|15669805|ref|NP_248619.1| - 7.5e-80 267.9 7.1 7.5e-80 267.9 4.9 1.5 2 0 0 2 2 2 1 Archaeal ATPase AAA_14 PF13173.1 gi|15669805|ref|NP_248619.1| - 3.1e-05 23.8 13.5 0.0061 16.4 0.1 3.6 1 1 2 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15669805|ref|NP_248619.1| - 6.6e-05 22.9 0.0 0.00061 19.8 0.0 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|15669805|ref|NP_248619.1| - 0.00022 21.3 0.1 0.0031 17.6 0.0 2.7 1 1 2 3 3 3 1 AAA domain MMR_HSR1 PF01926.18 gi|15669805|ref|NP_248619.1| - 0.0081 16.1 0.0 0.024 14.5 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_17 PF13207.1 gi|15669805|ref|NP_248619.1| - 0.012 16.4 0.7 0.18 12.6 0.5 2.8 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|15669805|ref|NP_248619.1| - 0.013 14.9 0.1 0.065 12.6 0.0 2.1 3 0 0 3 3 3 0 AAA-like domain AAA_18 PF13238.1 gi|15669805|ref|NP_248619.1| - 0.056 13.7 2.0 0.31 11.3 0.0 2.7 2 2 0 2 2 2 0 AAA domain DUF2281 PF10047.4 gi|15669805|ref|NP_248619.1| - 0.086 13.1 1.6 6.4 7.1 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2281) FANCI_S3 PF14677.1 gi|15669805|ref|NP_248619.1| - 0.3 10.4 4.3 0.15 11.4 0.1 2.4 4 0 0 4 4 4 0 FANCI solenoid 3 Glyco_hydro_15 PF00723.16 gi|15669806|ref|NP_248620.1| - 2.4e-12 46.1 0.6 0.00017 20.2 0.1 3.9 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 DUF608 PF04685.8 gi|15669806|ref|NP_248620.1| - 0.00031 19.5 1.4 0.00035 19.3 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF608 ZapA PF05164.8 gi|15669806|ref|NP_248620.1| - 0.039 13.9 0.0 1.4 8.9 0.0 2.8 2 1 1 3 3 3 0 Cell division protein ZapA Glyco_transf_36 PF06165.6 gi|15669806|ref|NP_248620.1| - 0.076 12.8 1.0 0.12 12.2 0.1 1.8 2 0 0 2 2 2 0 Glycosyltransferase family 36 Prenyltrans_1 PF13243.1 gi|15669806|ref|NP_248620.1| - 0.12 12.4 0.4 0.47 10.4 0.2 2.2 2 1 0 2 2 2 0 Prenyltransferase-like Prenyltrans PF00432.16 gi|15669806|ref|NP_248620.1| - 0.22 11.1 1.0 2.5 7.7 0.0 2.9 3 0 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat Glyco_hydro_57 PF03065.10 gi|15669807|ref|NP_248621.1| - 1.7e-84 283.8 6.0 2.1e-83 280.2 4.2 2.2 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.16 gi|15669807|ref|NP_248621.1| - 7.5e-09 35.2 0.0 1.4e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase MarR PF01047.17 gi|15669807|ref|NP_248621.1| - 0.092 12.4 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family Metalloenzyme PF01676.13 gi|15669808|ref|NP_248622.1| - 3.2e-69 233.1 0.0 3.7e-69 232.9 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily PhosphMutase PF10143.4 gi|15669808|ref|NP_248622.1| - 4e-67 225.1 0.0 8.7e-67 224.0 0.0 1.5 2 0 0 2 2 2 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Phosphodiest PF01663.17 gi|15669808|ref|NP_248622.1| - 4.8e-06 26.1 0.3 3.8e-05 23.1 0.1 2.1 2 1 0 3 3 3 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4445 PF14574.1 gi|15669808|ref|NP_248622.1| - 0.0098 14.1 0.3 0.055 11.6 0.1 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4445) DUF1027 PF06265.6 gi|15669808|ref|NP_248622.1| - 0.051 13.4 0.2 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1027) Sulfatase PF00884.18 gi|15669808|ref|NP_248622.1| - 0.064 12.4 0.0 0.42 9.7 0.0 1.9 2 0 0 2 2 2 0 Sulfatase CbiZ PF01955.13 gi|15669809|ref|NP_248623.1| - 4.3e-64 215.8 0.9 5e-64 215.6 0.7 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase PLDc PF00614.17 gi|15669809|ref|NP_248623.1| - 0.71 9.7 2.7 0.9 9.4 0.0 2.5 3 0 0 3 3 3 0 Phospholipase D Active site motif AP_endonuc_2 PF01261.19 gi|15669810|ref|NP_248624.1| - 1.5e-26 93.0 0.0 2.2e-26 92.4 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel KH_3 PF13014.1 gi|15669810|ref|NP_248624.1| - 0.082 12.5 0.0 0.24 11.0 0.0 1.9 2 0 0 2 2 2 0 KH domain DUF4041 PF13250.1 gi|15669810|ref|NP_248624.1| - 4 7.0 11.5 1.1 8.8 0.2 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4041) CheF-arch PF04283.7 gi|15669811|ref|NP_248625.1| - 3.2e-66 222.7 5.7 3.5e-66 222.5 4.0 1.0 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea IMPDH PF00478.20 gi|15669812|ref|NP_248626.1| - 1.1e-144 481.6 8.9 1.3e-144 481.4 6.2 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 gi|15669812|ref|NP_248626.1| - 2.9e-33 113.3 9.8 5.2e-17 61.3 0.4 3.2 3 0 0 3 3 3 2 CBS domain NMO PF03060.10 gi|15669812|ref|NP_248626.1| - 4.9e-15 55.5 8.0 3.8e-10 39.4 2.8 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 gi|15669812|ref|NP_248626.1| - 1.3e-14 53.7 7.6 6.5e-12 44.9 6.0 3.1 2 1 0 2 2 2 1 FMN-dependent dehydrogenase Glu_synthase PF01645.12 gi|15669812|ref|NP_248626.1| - 1.9e-06 27.0 5.8 4e-06 26.0 4.1 1.5 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.16 gi|15669812|ref|NP_248626.1| - 4.3e-06 26.1 3.8 4.3e-06 26.1 2.7 2.4 2 1 0 2 2 2 1 Histidine biosynthesis protein DHO_dh PF01180.16 gi|15669812|ref|NP_248626.1| - 6.7e-05 21.9 4.3 0.0015 17.5 0.7 2.6 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase ThiG PF05690.9 gi|15669812|ref|NP_248626.1| - 0.00011 21.4 4.8 0.00079 18.5 2.8 2.3 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG PcrB PF01884.12 gi|15669812|ref|NP_248626.1| - 0.00067 18.9 14.3 0.022 14.0 0.5 3.6 3 1 0 4 4 4 2 PcrB family Dus PF01207.12 gi|15669812|ref|NP_248626.1| - 0.00086 18.2 0.2 0.0018 17.1 0.1 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF561 PF04481.7 gi|15669812|ref|NP_248626.1| - 0.0023 16.9 2.1 0.041 12.8 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF561) TMP-TENI PF02581.12 gi|15669812|ref|NP_248626.1| - 0.009 15.1 5.1 0.36 9.9 1.0 2.5 1 1 1 2 2 2 2 Thiamine monophosphate synthase/TENI EAL PF00563.15 gi|15669812|ref|NP_248626.1| - 0.046 13.2 0.8 0.15 11.5 0.1 2.0 2 0 0 2 2 2 0 EAL domain HTH_Tnp_Mu_1 PF02316.11 gi|15669812|ref|NP_248626.1| - 0.068 12.8 0.6 0.22 11.2 0.2 2.0 1 1 1 2 2 2 0 Mu DNA-binding domain DUF131 PF01998.12 gi|15669813|ref|NP_248627.1| - 1.7e-21 75.3 2.9 1.7e-21 75.3 2.0 2.0 1 1 1 2 2 2 1 Protein of unknown function DUF131 DUF4064 PF13273.1 gi|15669813|ref|NP_248627.1| - 0.0024 17.9 6.9 0.0034 17.4 4.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) PTR2 PF00854.16 gi|15669813|ref|NP_248627.1| - 0.017 13.9 0.3 0.017 13.9 0.2 2.0 2 0 0 2 2 2 0 POT family Neurensin PF14927.1 gi|15669813|ref|NP_248627.1| - 0.027 13.8 0.6 0.043 13.1 0.0 1.5 1 1 0 1 1 1 0 Neurensin YwiC PF14256.1 gi|15669813|ref|NP_248627.1| - 0.03 14.4 0.3 0.036 14.1 0.2 1.1 1 0 0 1 1 1 0 YwiC-like protein DUF2371 PF10177.4 gi|15669813|ref|NP_248627.1| - 0.074 12.9 1.0 0.1 12.4 0.7 1.3 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) PRA1 PF03208.14 gi|15669813|ref|NP_248627.1| - 0.12 11.7 2.7 0.17 11.2 1.9 1.3 1 0 0 1 1 1 0 PRA1 family protein TerC PF03741.11 gi|15669813|ref|NP_248627.1| - 0.17 11.2 5.1 3.9 6.8 3.5 2.0 1 1 0 1 1 1 0 Integral membrane protein TerC family Tetraspannin PF00335.15 gi|15669813|ref|NP_248627.1| - 0.23 10.7 8.0 1.6 7.9 5.6 1.9 1 1 0 1 1 1 0 Tetraspanin family DUF4097 PF13349.1 gi|15669813|ref|NP_248627.1| - 0.25 10.8 0.1 0.25 10.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) Choline_transpo PF04515.7 gi|15669813|ref|NP_248627.1| - 0.35 9.5 4.2 1.4 7.5 2.8 1.8 1 1 0 1 1 1 0 Plasma-membrane choline transporter SUR7 PF06687.7 gi|15669813|ref|NP_248627.1| - 0.4 10.2 2.4 0.51 9.8 1.7 1.1 1 0 0 1 1 1 0 SUR7/PalI family ABC2_membrane PF01061.19 gi|15669813|ref|NP_248627.1| - 0.56 9.3 10.8 0.82 8.7 7.5 1.3 1 0 0 1 1 1 0 ABC-2 type transporter DUF2162 PF09930.4 gi|15669813|ref|NP_248627.1| - 0.79 8.8 8.3 2.3 7.3 5.7 1.8 1 1 0 1 1 1 0 Predicted transporter (DUF2162) PIG-P PF08510.7 gi|15669813|ref|NP_248627.1| - 1.8 8.2 6.7 12 5.5 0.0 2.1 2 0 0 2 2 2 0 PIG-P PMP22_Claudin PF00822.15 gi|15669813|ref|NP_248627.1| - 1.9 8.0 7.6 4.3 6.9 0.2 2.1 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family DUF1980 PF09323.5 gi|15669813|ref|NP_248627.1| - 2.8 7.6 5.3 0.32 10.7 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) ATP-synt_8 PF00895.15 gi|15669813|ref|NP_248627.1| - 2.9 8.1 7.3 3.3 7.9 0.1 2.3 2 0 0 2 2 2 0 ATP synthase protein 8 ABC2_membrane_3 PF12698.2 gi|15669813|ref|NP_248627.1| - 4.6 6.1 13.1 7.1 5.5 9.1 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.4 gi|15669813|ref|NP_248627.1| - 5.2 5.5 6.7 7.3 5.0 4.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Cupin_2 PF07883.6 gi|15669814|ref|NP_248628.1| - 8.6e-20 70.0 0.0 1.4e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.13 gi|15669814|ref|NP_248628.1| - 4.2e-10 39.4 0.0 4.9e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.14 gi|15669814|ref|NP_248628.1| - 1.7e-09 37.5 0.0 2.4e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.17 gi|15669814|ref|NP_248628.1| - 9.3e-08 31.6 0.0 1.2e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Cupin GPI PF06560.6 gi|15669814|ref|NP_248628.1| - 1.5e-07 30.6 0.3 2.7e-07 29.7 0.1 1.5 2 0 0 2 2 2 1 Glucose-6-phosphate isomerase (GPI) Cupin_3 PF05899.7 gi|15669814|ref|NP_248628.1| - 5.2e-06 25.7 0.0 7.5e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) CENP-C_C PF11699.3 gi|15669814|ref|NP_248628.1| - 0.00018 21.4 0.0 0.00026 20.8 0.0 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like ARD PF03079.9 gi|15669814|ref|NP_248628.1| - 0.0029 17.5 0.0 0.0041 17.0 0.0 1.2 1 0 0 1 1 1 1 ARD/ARD' family Auxin_BP PF02041.11 gi|15669814|ref|NP_248628.1| - 0.0055 16.1 0.0 0.011 15.1 0.0 1.6 1 1 0 1 1 1 1 Auxin binding protein Ectoine_synth PF06339.7 gi|15669814|ref|NP_248628.1| - 0.0089 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 Ectoine synthase EutQ PF06249.7 gi|15669814|ref|NP_248628.1| - 0.011 15.3 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ JmjC PF02373.17 gi|15669814|ref|NP_248628.1| - 0.031 14.5 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_8 PF13621.1 gi|15669814|ref|NP_248628.1| - 0.092 12.2 0.0 1.2 8.5 0.0 2.0 1 1 1 2 2 2 0 Cupin-like domain Cupin_6 PF12852.2 gi|15669814|ref|NP_248628.1| - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Cupin Cupin_4 PF08007.7 gi|15669814|ref|NP_248628.1| - 0.11 11.6 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 Cupin superfamily protein DUF1971 PF09313.6 gi|15669814|ref|NP_248628.1| - 0.14 11.9 0.2 0.62 9.8 0.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF1971) BPL_LplA_LipB PF03099.14 gi|15669815|ref|NP_248629.1| - 1e-17 64.2 0.1 1.8e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.12 gi|15669815|ref|NP_248629.1| - 3.2e-06 26.7 1.1 3.2e-06 26.7 0.8 1.7 2 0 0 2 2 2 1 Biotin protein ligase C terminal domain DUF4208 PF13907.1 gi|15669815|ref|NP_248629.1| - 0.041 14.0 0.4 0.079 13.1 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4208) ArsC PF03960.10 gi|15669815|ref|NP_248629.1| - 0.049 13.7 1.6 0.9 9.6 1.1 2.1 2 0 0 2 2 2 0 ArsC family Radical_SAM PF04055.16 gi|15669816|ref|NP_248630.1| - 4.8e-22 78.9 0.0 1.2e-21 77.6 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 gi|15669816|ref|NP_248630.1| - 3.2e-13 49.5 0.0 7.1e-13 48.4 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain TRAM PF01938.15 gi|15669816|ref|NP_248630.1| - 1.4e-12 47.2 0.4 2.9e-12 46.1 0.3 1.6 1 0 0 1 1 1 1 TRAM domain FIST PF08495.5 gi|15669819|ref|NP_248633.1| - 2.3e-35 121.5 0.0 3.5e-35 120.9 0.0 1.3 1 0 0 1 1 1 1 FIST N domain FIST_C PF10442.4 gi|15669819|ref|NP_248633.1| - 2.6e-17 63.0 0.0 1e-16 61.1 0.0 2.0 2 0 0 2 2 2 1 FIST C domain TrmB PF01978.14 gi|15669819|ref|NP_248633.1| - 2.1e-10 40.1 0.3 5.1e-10 38.9 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|15669819|ref|NP_248633.1| - 1.8e-05 24.0 0.8 4.9e-05 22.6 0.5 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|15669819|ref|NP_248633.1| - 0.00014 21.9 0.1 0.00036 20.5 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_5 PF01022.15 gi|15669819|ref|NP_248633.1| - 0.00023 20.7 0.5 0.00062 19.3 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PadR PF03551.9 gi|15669819|ref|NP_248633.1| - 0.0016 18.1 0.3 0.0048 16.6 0.2 1.8 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_20 PF12840.2 gi|15669819|ref|NP_248633.1| - 0.0056 16.4 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|15669819|ref|NP_248633.1| - 0.025 14.5 0.4 0.092 12.7 0.2 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF4476 PF14771.1 gi|15669819|ref|NP_248633.1| - 0.051 13.6 0.1 0.18 11.8 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) HTH_IclR PF09339.5 gi|15669819|ref|NP_248633.1| - 0.098 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|15669819|ref|NP_248633.1| - 0.13 11.9 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 MarR family TFIIE_alpha PF02002.12 gi|15669819|ref|NP_248633.1| - 2.6 7.6 11.3 0.22 11.0 3.5 2.5 3 0 0 3 3 3 0 TFIIE alpha subunit Toprim_4 PF13662.1 gi|15669820|ref|NP_248634.1| - 1.8e-09 37.4 0.1 3.1e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|15669820|ref|NP_248634.1| - 1.7e-07 31.1 0.4 1.1e-06 28.5 0.3 2.0 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 gi|15669820|ref|NP_248634.1| - 0.009 16.3 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Toprim-like Toprim_3 PF13362.1 gi|15669820|ref|NP_248634.1| - 0.029 14.6 0.0 0.044 14.0 0.0 1.3 1 0 0 1 1 1 0 Toprim domain FbpA PF05833.6 gi|15669822|ref|NP_248636.1| - 1.8e-111 372.9 27.7 2.4e-111 372.5 19.2 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|15669822|ref|NP_248636.1| - 2.1e-26 91.6 0.6 6.4e-26 90.0 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF814) Ribosomal_S13 PF00416.17 gi|15669822|ref|NP_248636.1| - 0.00057 20.3 2.1 0.00057 20.3 1.5 3.1 1 1 0 2 2 2 1 Ribosomal protein S13/S18 TPR_8 PF13181.1 gi|15669822|ref|NP_248636.1| - 2.8 7.9 7.3 0.78 9.6 1.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat UPF0179 PF03684.8 gi|15669823|ref|NP_248637.1| - 2.1e-56 189.4 6.6 2.4e-56 189.3 4.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) EGL-1 PF11430.3 gi|15669823|ref|NP_248637.1| - 7.9 6.1 6.6 11 5.7 0.6 2.6 3 0 0 3 3 3 0 Programmed cell death activator EGL-1 ABC_ATPase PF09818.4 gi|15669824|ref|NP_248638.1| - 1.1e-100 337.3 0.0 1.3e-100 337.1 0.0 1.0 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_23 PF13476.1 gi|15669824|ref|NP_248638.1| - 4.9e-08 33.5 0.7 0.00012 22.4 0.0 2.7 2 1 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|15669824|ref|NP_248638.1| - 2.8e-05 24.2 0.2 0.003 17.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.22 gi|15669824|ref|NP_248638.1| - 9.1e-05 22.7 0.6 0.0069 16.6 0.2 2.4 1 1 1 2 2 2 1 ABC transporter Arch_ATPase PF01637.13 gi|15669824|ref|NP_248638.1| - 0.0017 18.1 10.7 0.0068 16.1 0.2 2.5 2 1 0 2 2 2 2 Archaeal ATPase AAA_21 PF13304.1 gi|15669824|ref|NP_248638.1| - 0.0025 17.8 0.1 0.0025 17.8 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|15669824|ref|NP_248638.1| - 0.034 13.6 0.1 0.064 12.7 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain EutA PF06277.6 gi|15669824|ref|NP_248638.1| - 0.045 12.3 0.0 0.086 11.4 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutA AAA_14 PF13173.1 gi|15669824|ref|NP_248638.1| - 0.14 12.0 5.5 4.3 7.2 0.0 3.7 4 0 0 4 4 4 0 AAA domain Lactamase_B_2 PF12706.2 gi|15669825|ref|NP_248639.1| - 2e-06 27.5 0.2 2.5e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|15669825|ref|NP_248639.1| - 5.3e-05 22.9 0.0 0.00012 21.7 0.0 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|15669825|ref|NP_248639.1| - 0.00043 19.9 0.5 0.00088 18.9 0.3 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily PolC_DP2 PF03833.8 gi|15669826|ref|NP_248640.1| - 0 1469.1 9.5 0 1469.1 6.6 2.2 2 1 0 2 2 2 1 DNA polymerase II large subunit DP2 zf-ribbon_3 PF13248.1 gi|15669826|ref|NP_248640.1| - 0.00066 18.8 3.3 0.00066 18.8 2.3 2.8 3 0 0 3 3 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|15669826|ref|NP_248640.1| - 0.023 14.1 9.1 6.9 6.2 0.0 4.1 4 0 0 4 4 4 0 zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|15669826|ref|NP_248640.1| - 0.039 13.4 0.2 0.039 13.4 0.2 3.0 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger DZR PF12773.2 gi|15669826|ref|NP_248640.1| - 0.044 13.5 4.1 0.75 9.6 0.1 2.5 2 0 0 2 2 2 0 Double zinc ribbon Prok-RING_4 PF14447.1 gi|15669826|ref|NP_248640.1| - 0.068 12.7 1.7 0.2 11.1 1.2 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DNA_ligase_ZBD PF03119.11 gi|15669826|ref|NP_248640.1| - 1 9.1 5.7 13 5.5 0.1 3.6 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain DUF35_N PF12172.3 gi|15669826|ref|NP_248640.1| - 1 9.3 9.7 0.37 10.7 0.4 3.3 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C2HC5 PF06221.8 gi|15669826|ref|NP_248640.1| - 1 9.1 5.4 3 7.6 0.3 2.6 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF1272 PF06906.6 gi|15669826|ref|NP_248640.1| - 1.1 9.1 5.4 2.8 7.8 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Lar_restr_allev PF14354.1 gi|15669826|ref|NP_248640.1| - 2.7 8.3 9.5 26 5.2 0.1 3.7 2 2 1 3 3 3 0 Restriction alleviation protein Lar UPF0547 PF10571.4 gi|15669826|ref|NP_248640.1| - 5.5 6.7 10.5 15 5.3 0.4 3.3 2 1 1 3 3 3 0 Uncharacterised protein family UPF0547 DUF2072 PF09845.4 gi|15669826|ref|NP_248640.1| - 5.9 6.8 12.1 0.12 12.2 0.4 3.5 3 0 0 3 3 3 0 Zn-ribbon containing protein (DUF2072) Phosphorylase PF00343.15 gi|15669827|ref|NP_248641.1| - 3.4e-08 31.8 3.7 5.7e-05 21.2 0.0 4.1 3 1 1 4 4 4 3 Carbohydrate phosphorylase DUF3327 PF11806.3 gi|15669827|ref|NP_248641.1| - 0.074 13.3 0.0 7.5 6.8 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3327) DUF3417 PF11897.3 gi|15669827|ref|NP_248641.1| - 0.12 12.2 1.8 0.32 10.9 0.0 2.6 4 0 0 4 4 4 0 Protein of unknown function (DUF3417) Radical_SAM PF04055.16 gi|15669828|ref|NP_248642.1| - 2.5e-20 73.3 0.5 3.9e-20 72.6 0.4 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|15669828|ref|NP_248642.1| - 1e-13 51.6 0.9 2.3e-13 50.4 0.4 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|15669828|ref|NP_248642.1| - 3e-11 43.3 0.1 8.2e-11 41.9 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DNA_pol3_beta_3 PF02768.10 gi|15669828|ref|NP_248642.1| - 0.0083 15.6 0.1 0.017 14.6 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase III beta subunit, C-terminal domain FlaG PF03646.10 gi|15669828|ref|NP_248642.1| - 0.048 13.8 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 FlaG protein ApoA-II PF04711.8 gi|15669828|ref|NP_248642.1| - 0.061 13.2 0.0 0.12 12.2 0.0 1.6 1 1 0 1 1 1 0 Apolipoprotein A-II (ApoA-II) TrkA_N PF02254.13 gi|15669829|ref|NP_248643.1| - 6.6e-24 84.1 1.1 2e-23 82.5 0.5 2.2 2 0 0 2 2 2 1 TrkA-N domain DHH PF01368.15 gi|15669829|ref|NP_248643.1| - 3.6e-15 55.8 0.1 9.8e-15 54.4 0.1 1.7 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|15669829|ref|NP_248643.1| - 2.2e-11 43.3 0.4 5.5e-11 41.9 0.3 1.7 1 0 0 1 1 1 1 DHHA1 domain NAD_binding_7 PF13241.1 gi|15669829|ref|NP_248643.1| - 1.4e-07 31.7 0.2 6.1e-07 29.6 0.2 2.0 1 0 0 1 1 1 1 Putative NAD(P)-binding NAD_binding_2 PF03446.10 gi|15669829|ref|NP_248643.1| - 0.00064 19.5 0.4 0.0024 17.7 0.0 2.1 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase Saccharop_dh PF03435.13 gi|15669829|ref|NP_248643.1| - 0.0016 17.4 0.2 0.0025 16.8 0.2 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NmrA PF05368.8 gi|15669829|ref|NP_248643.1| - 0.005 16.1 0.1 0.0091 15.2 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.1 gi|15669829|ref|NP_248643.1| - 0.023 14.7 0.1 0.043 13.8 0.1 1.5 1 0 0 1 1 1 0 NADH(P)-binding dTMP_synthase PF02593.9 gi|15669829|ref|NP_248643.1| - 0.028 13.7 6.4 0.18 11.1 0.1 2.8 3 1 0 3 3 3 0 Thymidylate synthase MAF_flag10 PF01973.13 gi|15669830|ref|NP_248644.1| - 1.2e-42 145.2 1.3 1.7e-42 144.7 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 Alba PF01918.16 gi|15669830|ref|NP_248644.1| - 0.065 12.8 0.0 2.1 8.0 0.0 2.5 1 1 1 2 2 2 0 Alba OrfB_Zn_ribbon PF07282.6 gi|15669831|ref|NP_248645.1| - 6.6e-17 60.9 1.6 8.2e-17 60.6 0.4 1.8 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|15669831|ref|NP_248645.1| - 2.6e-08 33.5 4.6 3.2e-08 33.2 2.8 1.5 1 1 0 1 1 1 1 Probable transposase Prok-RING_1 PF14446.1 gi|15669831|ref|NP_248645.1| - 0.013 15.2 0.3 0.013 15.2 0.2 1.6 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.7 gi|15669831|ref|NP_248645.1| - 0.022 14.5 1.9 0.028 14.1 0.7 1.6 2 0 0 2 2 2 0 zinc-ribbons DUF2318 PF10080.4 gi|15669831|ref|NP_248645.1| - 0.031 14.0 0.6 0.076 12.7 0.4 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DZR PF12773.2 gi|15669831|ref|NP_248645.1| - 0.037 13.8 1.7 0.066 13.0 1.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon MGDG_synth PF06925.6 gi|15669831|ref|NP_248645.1| - 0.049 13.5 0.4 0.13 12.1 0.3 1.7 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase RNA_POL_M_15KD PF02150.11 gi|15669831|ref|NP_248645.1| - 0.071 12.8 0.9 0.16 11.6 0.7 1.6 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit PHD PF00628.24 gi|15669831|ref|NP_248645.1| - 0.13 11.9 1.8 0.25 11.0 1.3 1.5 1 0 0 1 1 1 0 PHD-finger TF_Zn_Ribbon PF08271.7 gi|15669831|ref|NP_248645.1| - 0.27 10.5 1.5 0.68 9.3 0.0 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding MCH PF02289.11 gi|15669832|ref|NP_248646.1| - 2.3e-166 552.4 4.2 2.6e-166 552.3 2.9 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) AAA_14 PF13173.1 gi|15669833|ref|NP_248647.1| - 2.4e-25 88.9 0.3 2.4e-25 88.9 0.2 2.0 2 1 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|15669833|ref|NP_248647.1| - 1.8e-07 31.1 8.1 1.5e-06 28.0 1.7 3.2 1 1 2 3 3 3 2 Archaeal ATPase Bac_DnaA PF00308.13 gi|15669833|ref|NP_248647.1| - 1.4e-06 28.1 0.8 1.4e-06 28.1 0.5 1.9 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_16 PF13191.1 gi|15669833|ref|NP_248647.1| - 1.2e-05 25.4 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.17 gi|15669833|ref|NP_248647.1| - 6e-05 22.0 2.6 0.0019 17.1 0.0 3.2 2 2 2 4 4 4 1 NB-ARC domain AAA_25 PF13481.1 gi|15669833|ref|NP_248647.1| - 0.00061 19.2 0.0 0.0016 17.8 0.0 1.6 2 0 0 2 2 2 1 AAA domain DAP3 PF10236.4 gi|15669833|ref|NP_248647.1| - 0.00067 18.6 0.0 0.0012 17.8 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 AAA PF00004.24 gi|15669833|ref|NP_248647.1| - 0.0009 19.4 0.0 0.0049 17.0 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|15669833|ref|NP_248647.1| - 0.0012 18.9 0.4 0.17 12.0 0.3 2.8 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.8 gi|15669833|ref|NP_248647.1| - 0.005 15.7 0.1 0.009 14.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) SRP54 PF00448.17 gi|15669833|ref|NP_248647.1| - 0.0053 16.2 0.0 0.01 15.2 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Arf PF00025.16 gi|15669833|ref|NP_248647.1| - 0.032 13.4 0.1 0.066 12.4 0.0 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family NACHT PF05729.7 gi|15669833|ref|NP_248647.1| - 0.086 12.4 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.1 gi|15669833|ref|NP_248647.1| - 0.25 11.6 6.2 0.4 10.9 3.6 1.9 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|15669833|ref|NP_248647.1| - 0.48 11.2 3.7 0.62 10.8 0.5 2.8 2 1 0 2 2 2 0 AAA domain NAD_synthase PF02540.12 gi|15669834|ref|NP_248648.1| - 5.9e-07 28.6 0.0 1.2e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|15669834|ref|NP_248648.1| - 8.9e-06 25.1 3.0 9.4e-06 25.0 0.1 2.3 2 1 0 3 3 3 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|15669834|ref|NP_248648.1| - 2.1e-05 23.2 0.3 3.9e-05 22.3 0.2 1.5 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|15669834|ref|NP_248648.1| - 0.00022 20.8 0.0 0.00042 19.8 0.0 1.4 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.9 gi|15669834|ref|NP_248648.1| - 0.0046 16.4 0.1 0.0088 15.5 0.1 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.15 gi|15669834|ref|NP_248648.1| - 0.051 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 PP-loop family DUF1690 PF07956.6 gi|15669834|ref|NP_248648.1| - 0.062 13.2 1.4 0.14 12.1 1.0 1.6 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) AHH PF14412.1 gi|15669834|ref|NP_248648.1| - 0.95 9.4 3.7 2.3 8.2 0.1 2.8 3 0 0 3 3 3 0 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH DUF1258 PF06869.7 gi|15669835|ref|NP_248649.1| - 0.039 13.0 0.1 0.042 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) Sarcoglycan_1 PF04790.8 gi|15669835|ref|NP_248649.1| - 0.068 12.3 0.6 0.098 11.8 0.4 1.3 1 1 0 1 1 1 0 Sarcoglycan complex subunit protein Methyltrn_RNA_2 PF04013.7 gi|15669836|ref|NP_248650.1| - 1.4e-89 298.9 0.0 1.5e-89 298.8 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase PhoU PF01895.14 gi|15669837|ref|NP_248651.1| - 3.3e-21 75.5 16.5 6.1e-14 52.2 2.7 2.6 3 0 0 3 3 2 2 PhoU domain HTH_24 PF13412.1 gi|15669837|ref|NP_248651.1| - 3.4e-06 26.3 1.7 4.8e-06 25.8 0.2 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.12 gi|15669837|ref|NP_248651.1| - 0.00016 21.1 9.7 0.0013 18.2 1.9 2.8 2 1 0 2 2 2 2 TFIIE alpha subunit HTH_Crp_2 PF13545.1 gi|15669837|ref|NP_248651.1| - 0.00019 21.1 0.0 0.00064 19.4 0.0 2.0 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|15669837|ref|NP_248651.1| - 0.00053 19.6 0.1 0.0036 16.9 0.0 2.3 3 0 0 3 3 3 1 MarR family HTH_37 PF13744.1 gi|15669837|ref|NP_248651.1| - 0.00074 19.2 0.1 0.0022 17.7 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|15669837|ref|NP_248651.1| - 0.00086 18.9 0.4 0.003 17.2 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 gi|15669837|ref|NP_248651.1| - 0.0013 18.7 0.0 0.0052 16.8 0.0 2.0 1 0 0 1 1 1 1 Transcriptional regulator Sigma70_r4 PF04545.11 gi|15669837|ref|NP_248651.1| - 0.0014 17.9 0.1 0.0034 16.6 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.17 gi|15669837|ref|NP_248651.1| - 0.0028 17.4 0.2 0.012 15.4 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_23 PF13384.1 gi|15669837|ref|NP_248651.1| - 0.003 17.1 0.0 0.0061 16.1 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_19 PF12844.2 gi|15669837|ref|NP_248651.1| - 0.0041 17.1 1.8 0.081 12.9 0.0 2.9 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|15669837|ref|NP_248651.1| - 0.0044 16.6 0.7 0.015 14.9 0.0 2.2 2 0 0 2 2 2 1 HTH domain MarR PF01047.17 gi|15669837|ref|NP_248651.1| - 0.017 14.8 0.0 0.042 13.5 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.1 gi|15669837|ref|NP_248651.1| - 0.019 14.9 0.0 0.043 13.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|15669837|ref|NP_248651.1| - 0.044 13.2 0.4 0.47 9.9 0.0 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_17 PF12728.2 gi|15669837|ref|NP_248651.1| - 0.06 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Condensin2nSMC PF12422.3 gi|15669837|ref|NP_248651.1| - 0.18 11.5 2.0 2.9 7.5 0.5 2.8 1 1 1 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit Fib_alpha PF08702.5 gi|15669837|ref|NP_248651.1| - 2.4 8.2 8.9 0.81 9.8 1.1 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family YkuI_C PF10388.4 gi|15669837|ref|NP_248651.1| - 3.3 7.3 9.6 0.37 10.4 1.7 2.3 2 1 0 2 2 2 0 EAL-domain associated signalling protein domain DUF1664 PF07889.7 gi|15669837|ref|NP_248651.1| - 7.1 6.4 11.3 9.3 6.0 0.7 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) V4R PF02830.13 gi|15669838|ref|NP_248652.1| - 6.2e-21 74.0 1.3 6.2e-21 74.0 0.9 1.5 2 0 0 2 2 2 1 V4R domain DUF2507 PF10702.4 gi|15669838|ref|NP_248652.1| - 1e-10 41.3 0.2 3e-10 39.8 0.1 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF2507) SMC_N PF02463.14 gi|15669839|ref|NP_248653.1| - 2.6e-59 200.1 64.6 3.5e-37 127.7 0.4 3.6 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.8 gi|15669839|ref|NP_248653.1| - 4.4e-32 110.5 2.2 5.5e-32 110.2 0.1 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.1 gi|15669839|ref|NP_248653.1| - 1.3e-13 51.5 45.3 8.2e-09 35.8 15.5 5.4 1 1 2 4 4 4 2 AAA domain AAA_29 PF13555.1 gi|15669839|ref|NP_248653.1| - 6.1e-10 38.4 0.0 1.2e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Reo_sigmaC PF04582.7 gi|15669839|ref|NP_248653.1| - 0.00064 18.9 28.5 0.049 12.8 3.1 5.5 2 2 3 6 6 6 4 Reovirus sigma C capsid protein AAA_23 PF13476.1 gi|15669839|ref|NP_248653.1| - 0.0011 19.2 210.6 79 3.4 23.3 7.7 2 2 2 4 4 4 0 AAA domain CCDC155 PF14662.1 gi|15669839|ref|NP_248653.1| - 0.0022 17.6 19.9 0.0022 17.6 13.8 7.6 2 2 5 7 7 7 1 Coiled-coil region of CCDC155 ABC_tran PF00005.22 gi|15669839|ref|NP_248653.1| - 0.0051 17.1 0.0 0.0051 17.1 0.0 6.2 3 2 0 3 3 3 1 ABC transporter AAA_16 PF13191.1 gi|15669839|ref|NP_248653.1| - 0.24 11.3 2.8 0.83 9.6 0.0 3.3 3 0 0 3 3 3 0 AAA ATPase domain DUF996 PF06195.8 gi|15669840|ref|NP_248654.1| - 1.1e-33 116.1 25.7 1.1e-33 116.1 17.8 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF996) DUF973 PF06157.6 gi|15669840|ref|NP_248654.1| - 0.0026 16.7 35.6 0.19 10.6 5.9 2.9 1 1 1 2 2 2 2 Protein of unknown function (DUF973) DUF2975 PF11188.3 gi|15669840|ref|NP_248654.1| - 0.21 11.2 23.2 4.1 7.1 8.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) DUF1469 PF07332.6 gi|15669840|ref|NP_248654.1| - 1.3 8.7 20.0 0.18 11.5 0.7 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF1469) Tetraspannin PF00335.15 gi|15669840|ref|NP_248654.1| - 2.9 7.1 26.6 0.63 9.2 1.6 2.1 1 1 0 2 2 2 0 Tetraspanin family BCHF PF07284.6 gi|15669840|ref|NP_248654.1| - 5.1 6.9 13.1 10 5.9 6.5 2.5 1 1 1 2 2 2 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) CobD_Cbib PF03186.8 gi|15669840|ref|NP_248654.1| - 8.9 5.2 9.2 0.8 8.7 0.8 2.2 1 1 1 2 2 2 0 CobD/Cbib protein Radical_SAM PF04055.16 gi|15669841|ref|NP_248655.1| - 1.2e-17 64.6 0.2 1.8e-17 63.9 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|15669841|ref|NP_248655.1| - 1.7e-15 57.0 0.0 2.9e-15 56.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|15669841|ref|NP_248655.1| - 7.5e-13 48.7 0.0 1.2e-12 48.0 0.0 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain SRP19 PF01922.12 gi|15669841|ref|NP_248655.1| - 0.1 13.2 0.2 0.36 11.4 0.1 1.9 2 0 0 2 2 2 0 SRP19 protein Pribosyltran PF00156.22 gi|15669842|ref|NP_248656.1| - 1.1e-21 76.7 0.9 2.9e-21 75.4 0.3 1.7 1 1 1 2 2 2 1 Phosphoribosyl transferase domain HTH_11 PF08279.7 gi|15669842|ref|NP_248656.1| - 0.00042 19.9 0.1 0.0019 17.7 0.1 2.2 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.7 gi|15669842|ref|NP_248656.1| - 0.001 18.4 0.1 0.0022 17.3 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.1 gi|15669842|ref|NP_248656.1| - 0.0013 18.1 0.1 0.015 14.6 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|15669842|ref|NP_248656.1| - 0.0043 16.6 0.0 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.10 gi|15669842|ref|NP_248656.1| - 0.0047 16.7 0.1 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4 PF04545.11 gi|15669842|ref|NP_248656.1| - 0.0056 15.9 0.1 0.015 14.6 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.14 gi|15669842|ref|NP_248656.1| - 0.015 14.6 0.1 0.031 13.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_Mga PF08280.6 gi|15669842|ref|NP_248656.1| - 0.035 13.8 0.9 8.7 6.1 0.0 2.6 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_28 PF13518.1 gi|15669842|ref|NP_248656.1| - 0.036 14.0 0.0 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain PRTase_2 PF15609.1 gi|15669842|ref|NP_248656.1| - 0.044 13.0 0.1 0.13 11.5 0.0 1.9 1 1 0 2 2 2 0 Phosphoribosyl transferase HTH_DeoR PF08220.7 gi|15669842|ref|NP_248656.1| - 0.049 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Endonuc-MspI PF09208.5 gi|15669842|ref|NP_248656.1| - 0.058 12.4 3.8 0.071 12.1 2.6 1.2 1 0 0 1 1 1 0 Restriction endonuclease MspI HTH_10 PF04967.7 gi|15669842|ref|NP_248656.1| - 0.061 12.9 0.1 0.14 11.7 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_ECF PF07638.6 gi|15669842|ref|NP_248656.1| - 0.062 12.9 0.2 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 ECF sigma factor MerR_1 PF13411.1 gi|15669842|ref|NP_248656.1| - 0.081 12.6 0.1 0.25 11.1 0.0 1.9 2 0 0 2 2 2 0 MerR HTH family regulatory protein CRAL_TRIO PF00650.15 gi|15669842|ref|NP_248656.1| - 0.093 12.2 0.0 0.28 10.6 0.0 1.8 2 0 0 2 2 2 0 CRAL/TRIO domain UPRTase PF14681.1 gi|15669842|ref|NP_248656.1| - 0.1 11.8 0.1 0.13 11.4 0.0 1.4 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase UPF0150 PF03681.10 gi|15669842|ref|NP_248656.1| - 0.12 11.9 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0150) MerR PF00376.18 gi|15669842|ref|NP_248656.1| - 0.13 11.8 0.3 0.35 10.4 0.0 1.9 2 0 0 2 2 2 0 MerR family regulatory protein Mga PF05043.8 gi|15669842|ref|NP_248656.1| - 0.14 12.4 1.2 2.5 8.4 0.3 2.4 2 0 0 2 2 2 0 Mga helix-turn-helix domain LacI PF00356.16 gi|15669842|ref|NP_248656.1| - 0.16 11.5 0.9 0.45 10.1 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family CBFD_NFYB_HMF PF00808.18 gi|15669843|ref|NP_248657.1| - 2.4e-13 49.9 3.3 2.4e-13 49.9 2.3 1.5 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|15669843|ref|NP_248657.1| - 3.6e-07 30.1 0.3 7.4e-07 29.2 0.2 1.5 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 DUF1931 PF09123.6 gi|15669843|ref|NP_248657.1| - 6.6e-05 22.8 1.8 7.2e-05 22.7 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) MerR_2 PF13591.1 gi|15669843|ref|NP_248657.1| - 0.0038 16.7 0.2 0.0071 15.9 0.0 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein CENP-S PF15630.1 gi|15669843|ref|NP_248657.1| - 0.0091 16.1 0.3 0.012 15.7 0.2 1.3 1 0 0 1 1 1 1 Kinetochore component CENP-S PIN_2 PF10130.4 gi|15669843|ref|NP_248657.1| - 0.093 12.7 0.8 0.14 12.1 0.6 1.3 1 0 0 1 1 1 0 PIN domain Wbp11 PF09429.5 gi|15669843|ref|NP_248657.1| - 0.6 10.1 4.6 0.51 10.3 2.3 1.6 1 1 1 2 2 2 0 WW domain binding protein 11 GATase_5 PF13507.1 gi|15669844|ref|NP_248658.1| - 7.5e-47 159.3 0.0 9.5e-47 159.0 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.19 gi|15669844|ref|NP_248658.1| - 1.5e-06 27.7 0.0 3.3e-06 26.6 0.0 1.5 1 1 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.23 gi|15669844|ref|NP_248658.1| - 1.2e-05 24.8 0.0 1.4e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|15669844|ref|NP_248658.1| - 0.00017 21.2 0.1 0.00032 20.3 0.1 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.14 gi|15669844|ref|NP_248658.1| - 0.015 14.9 0.0 0.026 14.1 0.0 1.5 1 0 0 1 1 1 0 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|15669844|ref|NP_248658.1| - 0.044 13.2 0.1 0.078 12.4 0.1 1.5 1 1 0 1 1 1 0 Peptidase C26 Methyltrans_SAM PF10672.4 gi|15669845|ref|NP_248659.1| - 2.5e-16 59.3 0.1 3.3e-16 58.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_31 PF13847.1 gi|15669845|ref|NP_248659.1| - 1.7e-15 56.9 0.2 3.6e-15 55.8 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|15669845|ref|NP_248659.1| - 1.1e-13 51.2 0.9 1.6e-13 50.7 0.6 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|15669845|ref|NP_248659.1| - 3.2e-13 50.2 0.0 6.5e-13 49.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|15669845|ref|NP_248659.1| - 4.4e-13 49.2 0.0 7.1e-13 48.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669845|ref|NP_248659.1| - 2.1e-11 43.5 0.1 5.5e-11 42.1 0.0 1.7 2 0 0 2 2 2 1 Conserved hypothetical protein 95 MTS PF05175.9 gi|15669845|ref|NP_248659.1| - 1e-09 37.9 0.0 1.8e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|15669845|ref|NP_248659.1| - 5.5e-09 35.5 0.0 8.8e-09 34.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|15669845|ref|NP_248659.1| - 1.7e-08 34.1 0.0 4e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PUA PF01472.15 gi|15669845|ref|NP_248659.1| - 1.5e-07 31.0 0.0 3.6e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 PUA domain Methyltransf_25 PF13649.1 gi|15669845|ref|NP_248659.1| - 3.4e-07 30.5 0.0 7.6e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|15669845|ref|NP_248659.1| - 1.3e-06 28.5 0.0 2.6e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase UPF0020 PF01170.13 gi|15669845|ref|NP_248659.1| - 1.6e-06 27.7 0.0 3e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 TRM PF02005.11 gi|15669845|ref|NP_248659.1| - 2.8e-06 26.5 0.5 5.3e-06 25.5 0.0 1.6 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase N6_Mtase PF02384.11 gi|15669845|ref|NP_248659.1| - 3.9e-06 26.1 0.0 7.3e-06 25.2 0.0 1.6 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_23 PF13489.1 gi|15669845|ref|NP_248659.1| - 4.1e-06 26.6 0.0 6.7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|15669845|ref|NP_248659.1| - 7.9e-06 25.1 0.0 1.5e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.7 gi|15669845|ref|NP_248659.1| - 2.9e-05 24.4 0.0 6.1e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|15669845|ref|NP_248659.1| - 5.7e-05 22.3 0.0 0.00011 21.4 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|15669845|ref|NP_248659.1| - 9.3e-05 22.8 0.0 0.0002 21.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.12 gi|15669845|ref|NP_248659.1| - 0.00028 20.0 0.0 0.00069 18.7 0.0 1.6 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_10 PF05971.7 gi|15669845|ref|NP_248659.1| - 0.0016 17.6 0.0 0.0028 16.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF890) tRNA_U5-meth_tr PF05958.6 gi|15669845|ref|NP_248659.1| - 0.0043 15.7 1.0 0.0072 15.0 0.1 1.8 2 1 0 2 2 2 1 tRNA (Uracil-5-)-methyltransferase DHquinase_II PF01220.14 gi|15669845|ref|NP_248659.1| - 0.058 12.7 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Dehydroquinase class II TPMT PF05724.6 gi|15669845|ref|NP_248659.1| - 0.084 12.2 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) GRIP PF01465.15 gi|15669845|ref|NP_248659.1| - 0.094 12.2 1.4 2.2 7.8 0.1 3.0 3 0 0 3 3 3 0 GRIP domain NMD3 PF04981.8 gi|15669846|ref|NP_248660.1| - 2.6e-66 223.1 0.9 3.7e-66 222.6 0.6 1.2 1 0 0 1 1 1 1 NMD3 family Thioredoxin_2 PF13098.1 gi|15669846|ref|NP_248660.1| - 0.034 14.3 3.1 0.29 11.3 0.1 2.7 3 0 0 3 3 3 0 Thioredoxin-like domain PSD4 PF07631.6 gi|15669846|ref|NP_248660.1| - 0.064 13.6 0.2 0.14 12.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1592) TRADD_N PF09034.5 gi|15669846|ref|NP_248660.1| - 0.097 12.6 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 TRADD, N-terminal domain DZR PF12773.2 gi|15669846|ref|NP_248660.1| - 0.097 12.5 1.6 0.89 9.4 0.3 2.3 2 1 0 2 2 2 0 Double zinc ribbon SAM_adeno_trans PF01887.11 gi|15669847|ref|NP_248661.1| - 5.1e-77 258.4 0.5 1.3e-76 257.0 0.3 1.6 1 1 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase PAS_3 PF08447.6 gi|15669847|ref|NP_248661.1| - 0.042 13.9 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 PAS fold Topoisom_bac PF01131.15 gi|15669848|ref|NP_248662.1| - 1.7e-121 405.8 5.7 2.3e-121 405.4 4.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.14 gi|15669848|ref|NP_248662.1| - 4e-48 160.6 41.2 1.3e-18 66.2 3.7 4.3 5 0 0 5 5 4 3 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.17 gi|15669848|ref|NP_248662.1| - 9e-21 73.7 0.5 3.7e-20 71.7 0.0 2.3 2 0 0 2 2 2 1 Toprim domain DUF1272 PF06906.6 gi|15669848|ref|NP_248662.1| - 0.00035 20.3 11.9 0.2 11.5 0.4 3.6 3 0 0 3 3 3 3 Protein of unknown function (DUF1272) ADK_lid PF05191.9 gi|15669848|ref|NP_248662.1| - 0.00039 20.0 12.1 0.69 9.6 0.2 4.7 4 0 0 4 4 4 2 Adenylate kinase, active site lid zinc_ribbon_2 PF13240.1 gi|15669848|ref|NP_248662.1| - 0.0034 16.7 14.0 0.2 11.1 0.2 4.2 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.2 gi|15669848|ref|NP_248662.1| - 0.0065 16.2 3.1 0.0065 16.2 2.2 3.2 1 1 1 2 2 2 1 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|15669848|ref|NP_248662.1| - 0.016 14.5 7.9 2.3 7.6 0.1 3.9 3 0 0 3 3 3 0 TFIIB zinc-binding DUF2310 PF10071.4 gi|15669848|ref|NP_248662.1| - 0.017 14.1 0.7 7.4 5.4 0.0 3.1 2 1 1 3 3 3 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) SAP PF02037.22 gi|15669848|ref|NP_248662.1| - 0.019 14.4 1.2 0.055 12.9 0.1 2.5 2 0 0 2 2 2 0 SAP domain Topo_Zn_Ribbon PF08272.6 gi|15669848|ref|NP_248662.1| - 0.023 14.0 0.2 2.1 7.7 0.0 3.3 3 0 0 3 3 3 0 Topoisomerase I zinc-ribbon-like zf-TFIIB PF13453.1 gi|15669848|ref|NP_248662.1| - 0.05 12.8 5.6 7.9 5.7 0.1 3.9 3 0 0 3 3 3 0 Transcription factor zinc-finger HTH_27 PF13463.1 gi|15669848|ref|NP_248662.1| - 0.052 13.8 0.2 0.15 12.4 0.1 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain DNA_ligase_ZBD PF03119.11 gi|15669848|ref|NP_248662.1| - 0.18 11.5 14.7 2 8.2 0.1 4.7 4 0 0 4 4 4 0 NAD-dependent DNA ligase C4 zinc finger domain zf-IS66 PF13005.2 gi|15669848|ref|NP_248662.1| - 0.26 11.2 13.5 12 6.0 0.0 4.5 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 Zn_ribbon_recom PF13408.1 gi|15669848|ref|NP_248662.1| - 0.31 11.3 24.4 0.25 11.6 2.4 4.3 3 1 1 4 4 3 0 Recombinase zinc beta ribbon domain PADR1 PF08063.7 gi|15669848|ref|NP_248662.1| - 0.35 10.2 14.3 1.5 8.2 0.8 3.6 3 0 0 3 3 3 0 PADR1 (NUC008) domain PhnA_Zn_Ribbon PF08274.7 gi|15669848|ref|NP_248662.1| - 1.2 8.9 9.5 26 4.6 0.0 4.6 4 1 0 4 4 4 0 PhnA Zinc-Ribbon zf-ISL3 PF14690.1 gi|15669848|ref|NP_248662.1| - 2.6 8.1 13.2 12 5.9 0.1 3.9 4 0 0 4 4 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Methyltrans_SAM PF10672.4 gi|15669849|ref|NP_248663.1| - 5.9e-19 68.0 0.0 8.3e-19 67.5 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_31 PF13847.1 gi|15669849|ref|NP_248663.1| - 4.1e-16 58.9 0.2 1.8e-15 56.8 0.1 2.0 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.11 gi|15669849|ref|NP_248663.1| - 5.8e-14 52.1 0.2 9.7e-14 51.4 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|15669849|ref|NP_248663.1| - 1.1e-13 51.2 0.0 1.7e-13 50.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|15669849|ref|NP_248663.1| - 1.1e-12 48.5 0.0 1.9e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|15669849|ref|NP_248663.1| - 5.1e-10 39.0 0.0 8.5e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.9 gi|15669849|ref|NP_248663.1| - 2.5e-09 36.7 0.0 4.1e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|15669849|ref|NP_248663.1| - 1.1e-08 34.5 0.1 4.6e-08 32.5 0.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|15669849|ref|NP_248663.1| - 7.3e-08 32.1 0.0 1.3e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.1 gi|15669849|ref|NP_248663.1| - 6.6e-07 29.6 0.0 3.1e-06 27.4 0.0 2.2 3 1 0 3 3 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|15669849|ref|NP_248663.1| - 1.7e-06 27.8 0.0 3e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|15669849|ref|NP_248663.1| - 2.2e-06 27.3 0.0 6.2e-06 25.9 0.0 1.7 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 FtsJ PF01728.14 gi|15669849|ref|NP_248663.1| - 2.3e-06 27.7 0.0 3.8e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRM PF02005.11 gi|15669849|ref|NP_248663.1| - 5.4e-06 25.5 0.0 7.5e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase N6_Mtase PF02384.11 gi|15669849|ref|NP_248663.1| - 1.6e-05 24.1 0.0 2.9e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase CMAS PF02353.15 gi|15669849|ref|NP_248663.1| - 1.7e-05 24.0 0.0 2.9e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|15669849|ref|NP_248663.1| - 4.8e-05 22.5 0.3 9.9e-05 21.5 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 gi|15669849|ref|NP_248663.1| - 7e-05 23.2 0.0 0.00018 21.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|15669849|ref|NP_248663.1| - 0.00015 22.1 0.0 0.00032 21.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.12 gi|15669849|ref|NP_248663.1| - 0.0003 19.9 0.0 0.00056 19.0 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_10 PF05971.7 gi|15669849|ref|NP_248663.1| - 0.00076 18.7 0.0 0.0016 17.6 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF890) tRNA_U5-meth_tr PF05958.6 gi|15669849|ref|NP_248663.1| - 0.032 12.9 0.0 0.057 12.1 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase TPMT PF05724.6 gi|15669849|ref|NP_248663.1| - 0.071 12.5 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DUF760 PF05542.6 gi|15669849|ref|NP_248663.1| - 0.11 12.6 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF760) HTH_24 PF13412.1 gi|15669850|ref|NP_248664.1| - 5.6e-05 22.4 0.1 0.00012 21.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PCI PF01399.22 gi|15669850|ref|NP_248664.1| - 0.00018 21.7 1.1 0.00026 21.2 0.8 1.2 1 0 0 1 1 1 1 PCI domain Rep_fac-A_3 PF08661.6 gi|15669850|ref|NP_248664.1| - 0.00027 20.7 0.1 0.00047 20.0 0.0 1.4 1 0 0 1 1 1 1 Replication factor A protein 3 Rrf2 PF02082.15 gi|15669850|ref|NP_248664.1| - 0.005 16.9 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.7 gi|15669850|ref|NP_248664.1| - 0.0083 15.7 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 1 HTH domain DUF977 PF06163.6 gi|15669850|ref|NP_248664.1| - 0.0096 15.6 0.1 0.034 13.8 0.0 1.9 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF977) Cytochrom_C550 PF14495.1 gi|15669850|ref|NP_248664.1| - 0.012 15.0 0.0 0.02 14.3 0.0 1.4 1 0 0 1 1 1 0 Cytochrome c-550 domain TrmB PF01978.14 gi|15669850|ref|NP_248664.1| - 0.02 14.5 0.6 0.071 12.8 0.1 2.3 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_Mga PF08280.6 gi|15669850|ref|NP_248664.1| - 0.021 14.5 1.4 0.028 14.1 0.2 1.7 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_AsnC-type PF13404.1 gi|15669850|ref|NP_248664.1| - 0.11 12.0 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Pribosyltran PF00156.22 gi|15669851|ref|NP_248665.1| - 3.2e-22 78.5 0.6 3.2e-22 78.5 0.4 1.5 2 0 0 2 2 2 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|15669851|ref|NP_248665.1| - 7.3e-06 25.3 0.0 1e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|15669851|ref|NP_248665.1| - 0.0001 21.7 0.1 0.00015 21.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase FAA_hydrolase PF01557.13 gi|15669852|ref|NP_248666.1| - 7.8e-69 231.4 0.0 9.3e-69 231.1 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Peptidase_U32 PF01136.14 gi|15669853|ref|NP_248667.1| - 3.6e-19 68.6 0.0 5.7e-19 67.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 Arch_ATPase PF01637.13 gi|15669855|ref|NP_248669.1| - 1.3e-78 263.8 8.8 1.3e-78 263.8 6.1 1.9 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|15669855|ref|NP_248669.1| - 2.7e-08 34.0 0.0 4e-07 30.2 0.0 2.7 1 1 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|15669855|ref|NP_248669.1| - 1.2e-07 31.6 13.2 2e-06 27.6 0.7 3.1 2 2 1 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15669855|ref|NP_248669.1| - 2.9e-06 27.3 0.0 7.8e-06 26.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|15669855|ref|NP_248669.1| - 3.1e-06 27.3 0.1 0.00014 22.0 0.0 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RNA12 PF10443.4 gi|15669855|ref|NP_248669.1| - 9.4e-05 21.0 0.2 0.68 8.3 0.0 3.2 1 1 2 4 4 4 2 RNA12 protein AAA_17 PF13207.1 gi|15669855|ref|NP_248669.1| - 0.00022 22.0 3.6 0.0052 17.5 2.5 2.8 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|15669855|ref|NP_248669.1| - 0.0006 19.5 0.0 0.0017 18.0 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|15669855|ref|NP_248669.1| - 0.0014 18.9 0.8 0.0014 18.9 0.5 3.0 1 1 1 2 2 2 1 AAA domain KAP_NTPase PF07693.9 gi|15669855|ref|NP_248669.1| - 0.0019 17.2 0.8 0.0079 15.2 0.6 2.0 1 1 0 1 1 1 1 KAP family P-loop domain AAA_10 PF12846.2 gi|15669855|ref|NP_248669.1| - 0.0041 16.5 0.0 0.034 13.5 0.0 2.3 3 0 0 3 3 3 1 AAA-like domain Zot PF05707.7 gi|15669855|ref|NP_248669.1| - 0.0055 16.1 0.0 0.057 12.8 0.0 2.1 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_25 PF13481.1 gi|15669855|ref|NP_248669.1| - 0.0061 15.9 0.0 5.6 6.3 0.0 2.9 2 1 0 2 2 2 1 AAA domain TK PF00265.13 gi|15669855|ref|NP_248669.1| - 0.0062 16.1 2.8 0.065 12.7 0.0 3.1 3 1 1 4 4 4 1 Thymidine kinase NACHT PF05729.7 gi|15669855|ref|NP_248669.1| - 0.011 15.3 0.0 0.072 12.7 0.0 2.3 2 1 0 2 2 2 0 NACHT domain cobW PF02492.14 gi|15669855|ref|NP_248669.1| - 0.012 15.1 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.17 gi|15669855|ref|NP_248669.1| - 0.024 14.8 0.0 0.098 12.8 0.0 2.1 2 0 0 2 2 2 0 RNA helicase KaiC PF06745.8 gi|15669855|ref|NP_248669.1| - 0.042 12.9 0.1 0.12 11.4 0.0 1.8 1 1 0 1 1 1 0 KaiC MMR_HSR1 PF01926.18 gi|15669855|ref|NP_248669.1| - 0.062 13.2 1.1 0.14 12.1 0.2 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase NTPase_1 PF03266.10 gi|15669855|ref|NP_248669.1| - 0.077 12.7 0.1 0.82 9.3 0.0 2.6 2 1 1 3 3 3 0 NTPase PhoU PF01895.14 gi|15669855|ref|NP_248669.1| - 0.1 13.0 3.2 0.34 11.3 0.6 2.8 2 1 0 2 2 2 0 PhoU domain ABC_tran PF00005.22 gi|15669855|ref|NP_248669.1| - 0.1 12.8 0.0 0.25 11.6 0.0 1.8 1 1 0 1 1 1 0 ABC transporter RICH PF05062.7 gi|15669855|ref|NP_248669.1| - 1.4 9.1 7.3 0.3 11.2 0.4 3.0 2 0 0 2 2 2 0 RICH domain tRNA-synt_2d PF01409.15 gi|15669856|ref|NP_248670.1| - 8.4e-67 224.9 0.0 1.7e-61 207.6 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|15669856|ref|NP_248670.1| - 4.9e-06 26.2 0.1 2.7e-05 23.7 0.1 2.2 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.15 gi|15669856|ref|NP_248670.1| - 0.0028 16.4 0.1 1.7 7.3 0.0 2.7 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) EntA_Immun PF08951.5 gi|15669856|ref|NP_248670.1| - 0.45 10.6 4.0 0.42 10.7 0.4 2.6 3 0 0 3 3 3 0 Enterocin A Immunity SNO PF01174.14 gi|15669857|ref|NP_248671.1| - 1.2e-84 282.5 0.1 1.4e-84 282.4 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|15669857|ref|NP_248671.1| - 1.2e-08 34.6 0.0 1.9e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|15669857|ref|NP_248671.1| - 1.6e-05 24.5 0.2 2.3e-05 24.0 0.1 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain UPF0180 PF03698.8 gi|15669857|ref|NP_248671.1| - 0.0004 20.1 0.2 0.0055 16.5 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0180) Peptidase_C26 PF07722.8 gi|15669857|ref|NP_248671.1| - 0.0016 17.9 0.3 0.077 12.4 0.1 2.8 1 1 1 2 2 2 1 Peptidase C26 DUF4066 PF13278.1 gi|15669857|ref|NP_248671.1| - 0.0016 17.6 0.0 0.0034 16.6 0.0 1.5 2 0 0 2 2 2 1 Putative amidotransferase DJ-1_PfpI PF01965.19 gi|15669857|ref|NP_248671.1| - 0.0018 17.7 0.0 0.0023 17.3 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_S51 PF03575.12 gi|15669857|ref|NP_248671.1| - 0.063 13.0 0.1 0.091 12.5 0.1 1.3 1 0 0 1 1 1 0 Peptidase family S51 ABC_tran PF00005.22 gi|15669858|ref|NP_248672.1| - 7.4e-54 181.7 0.2 6.5e-29 100.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|15669858|ref|NP_248672.1| - 3.8e-18 66.4 7.4 7.4e-08 32.6 0.2 4.4 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|15669858|ref|NP_248672.1| - 1.7e-12 47.1 7.2 1.4e-07 30.9 0.1 4.2 3 1 1 4 4 4 2 AAA ATPase domain DUF258 PF03193.11 gi|15669858|ref|NP_248672.1| - 1.8e-10 40.2 0.1 2.6e-05 23.4 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|15669858|ref|NP_248672.1| - 3e-09 37.0 4.4 0.003 17.6 0.7 4.2 3 1 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|15669858|ref|NP_248672.1| - 3.4e-07 30.4 0.0 0.016 15.1 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_17 PF13207.1 gi|15669858|ref|NP_248672.1| - 5.2e-07 30.4 4.7 0.0052 17.5 0.1 3.5 3 1 0 3 3 3 2 AAA domain SMC_N PF02463.14 gi|15669858|ref|NP_248672.1| - 9.7e-07 28.2 1.3 0.011 14.9 0.9 3.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|15669858|ref|NP_248672.1| - 1.2e-06 27.9 0.2 0.0088 15.5 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA PF00004.24 gi|15669858|ref|NP_248672.1| - 1.4e-05 25.3 0.4 2.2 8.4 0.0 4.6 3 1 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|15669858|ref|NP_248672.1| - 1.8e-05 24.3 0.1 0.065 12.6 0.0 2.5 2 0 0 2 2 2 2 AAA-like domain AAA_25 PF13481.1 gi|15669858|ref|NP_248672.1| - 2.7e-05 23.6 0.0 4.1 6.7 0.0 4.1 4 0 0 4 4 4 0 AAA domain SbcCD_C PF13558.1 gi|15669858|ref|NP_248672.1| - 3.3e-05 23.7 0.0 0.0033 17.2 0.0 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit MobB PF03205.9 gi|15669858|ref|NP_248672.1| - 7.3e-05 22.5 0.1 0.081 12.6 0.0 2.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.1 gi|15669858|ref|NP_248672.1| - 0.00012 21.9 1.9 0.42 10.5 0.0 4.0 3 2 1 4 4 4 1 AAA domain AAA_23 PF13476.1 gi|15669858|ref|NP_248672.1| - 0.00025 21.4 5.7 0.019 15.3 1.8 2.6 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|15669858|ref|NP_248672.1| - 0.00037 20.8 5.7 0.1 12.9 0.3 3.6 4 1 0 4 4 3 2 AAA domain NB-ARC PF00931.17 gi|15669858|ref|NP_248672.1| - 0.00075 18.4 0.7 0.95 8.2 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain Miro PF08477.8 gi|15669858|ref|NP_248672.1| - 0.00078 19.9 0.0 0.34 11.3 0.0 2.6 2 0 0 2 2 2 1 Miro-like protein IstB_IS21 PF01695.12 gi|15669858|ref|NP_248672.1| - 0.0011 18.4 0.8 0.49 9.7 0.0 3.8 4 0 0 4 4 4 1 IstB-like ATP binding protein AAA_30 PF13604.1 gi|15669858|ref|NP_248672.1| - 0.0013 18.3 0.0 0.47 10.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.10 gi|15669858|ref|NP_248672.1| - 0.0014 17.4 0.0 0.14 10.7 0.0 2.2 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein UPF0079 PF02367.12 gi|15669858|ref|NP_248672.1| - 0.0015 18.1 0.4 1 9.0 0.1 2.6 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_24 PF13479.1 gi|15669858|ref|NP_248672.1| - 0.0062 16.1 1.2 3.7 7.0 0.0 3.3 4 0 0 4 4 3 0 AAA domain AAA_33 PF13671.1 gi|15669858|ref|NP_248672.1| - 0.0064 16.3 0.0 0.76 9.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain ArgK PF03308.11 gi|15669858|ref|NP_248672.1| - 0.008 14.9 0.3 0.044 12.5 0.0 2.0 2 0 0 2 2 2 1 ArgK protein FtsK_SpoIIIE PF01580.13 gi|15669858|ref|NP_248672.1| - 0.018 14.5 0.1 2.8 7.3 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family PRK PF00485.13 gi|15669858|ref|NP_248672.1| - 0.019 14.5 0.1 1.1 8.7 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family MMR_HSR1 PF01926.18 gi|15669858|ref|NP_248672.1| - 0.019 14.9 3.2 0.15 12.0 0.1 2.9 2 2 0 2 2 2 0 50S ribosome-binding GTPase RNA_helicase PF00910.17 gi|15669858|ref|NP_248672.1| - 0.022 14.9 0.1 9.4 6.4 0.0 2.5 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.12 gi|15669858|ref|NP_248672.1| - 0.022 14.5 1.8 0.91 9.2 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function DUF87 Fe_dep_repr_C PF02742.10 gi|15669858|ref|NP_248672.1| - 0.022 14.4 0.0 0.069 12.8 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain ATP-synt_ab PF00006.20 gi|15669858|ref|NP_248672.1| - 0.027 13.9 0.0 2.2 7.7 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_5 PF07728.9 gi|15669858|ref|NP_248672.1| - 0.029 14.0 1.6 4.5 6.9 0.0 3.5 4 0 0 4 4 4 0 AAA domain (dynein-related subfamily) PhoH PF02562.11 gi|15669858|ref|NP_248672.1| - 0.068 12.3 0.0 1.9 7.6 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein Zeta_toxin PF06414.7 gi|15669858|ref|NP_248672.1| - 0.077 12.0 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_19 PF13245.1 gi|15669858|ref|NP_248672.1| - 0.085 12.6 0.1 11 5.9 0.0 3.0 3 0 0 3 3 2 0 Part of AAA domain Sigma54_activat PF00158.21 gi|15669858|ref|NP_248672.1| - 0.099 12.1 0.2 27 4.2 0.0 3.2 3 0 0 3 3 3 0 Sigma-54 interaction domain PduV-EutP PF10662.4 gi|15669858|ref|NP_248672.1| - 0.11 11.9 0.1 7.6 6.0 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.7 gi|15669858|ref|NP_248672.1| - 0.16 11.6 2.1 11 5.5 0.1 2.8 2 1 0 2 2 2 0 NACHT domain AAA_28 PF13521.1 gi|15669858|ref|NP_248672.1| - 0.16 11.9 0.0 24 4.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain NTP_transf_3 PF12804.2 gi|15669859|ref|NP_248673.1| - 2.2e-26 92.8 0.0 2.7e-26 92.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain STAT2_C PF12188.3 gi|15669859|ref|NP_248673.1| - 0.87 9.4 5.0 5.4 6.8 0.0 3.1 3 1 1 4 4 4 0 Signal transducer and activator of transcription 2 C terminal DUF711 PF05167.7 gi|15669861|ref|NP_248675.1| - 5.9e-177 588.3 9.4 7.3e-177 588.0 6.5 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) Cas_DxTHG PF09455.5 gi|15669862|ref|NP_248676.1| - 2.6e-70 237.5 25.6 2.6e-70 237.5 17.8 1.8 2 0 0 2 2 2 1 CRISPR-associated (Cas) DxTHG family DUF964 PF06133.6 gi|15669862|ref|NP_248676.1| - 0.0042 17.0 1.7 0.055 13.4 0.1 2.8 2 0 0 2 2 2 1 Protein of unknown function (DUF964) RAMPs PF03787.10 gi|15669863|ref|NP_248677.1| - 1.7e-24 86.8 9.0 2.3e-24 86.4 6.2 1.1 1 0 0 1 1 1 1 RAMP superfamily RAMPs PF03787.10 gi|15669864|ref|NP_248678.1| - 7.9e-06 25.8 17.3 7.9e-06 25.8 12.0 2.2 2 1 0 2 2 2 1 RAMP superfamily IL34 PF15036.1 gi|15669864|ref|NP_248678.1| - 0.007 15.9 0.8 0.015 14.9 0.5 1.6 1 1 0 1 1 1 1 Interleukin 34 Cas_Cmr3 PF09700.5 gi|15669864|ref|NP_248678.1| - 0.0087 15.5 0.2 0.014 14.8 0.1 1.5 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.10 gi|15669865|ref|NP_248679.1| - 4.5e-17 62.5 5.4 4.5e-17 62.5 3.7 1.4 1 1 0 1 1 1 1 RAMP superfamily zf-CXXC PF02008.15 gi|15669865|ref|NP_248679.1| - 0.046 13.5 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 CXXC zinc finger domain DUF310 PF03750.8 gi|15669866|ref|NP_248680.1| - 9e-36 122.6 2.9 1e-35 122.4 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF310) Glu-tRNAGln PF02686.10 gi|15669866|ref|NP_248680.1| - 0.023 14.5 0.7 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit DUF4200 PF13863.1 gi|15669866|ref|NP_248680.1| - 0.14 12.1 2.6 0.23 11.4 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF2935 PF11155.3 gi|15669866|ref|NP_248680.1| - 0.23 11.5 2.1 0.6 10.2 1.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) GrpE PF01025.14 gi|15669866|ref|NP_248680.1| - 0.35 10.3 2.6 0.73 9.3 1.8 1.6 1 1 0 1 1 1 0 GrpE AKAP95 PF04988.7 gi|15669867|ref|NP_248681.1| - 0.052 13.3 0.2 0.052 13.3 0.2 1.0 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) DUF3888 PF13027.1 gi|15669867|ref|NP_248681.1| - 0.11 12.3 0.2 0.14 12.0 0.1 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3888) HD PF01966.17 gi|15669868|ref|NP_248682.1| - 1.8e-11 44.1 0.4 5.8e-11 42.4 0.3 1.9 1 0 0 1 1 1 1 HD domain DUF1241 PF06840.6 gi|15669869|ref|NP_248683.1| - 0.038 13.2 0.1 0.062 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Cas_DxTHG PF09455.5 gi|15669870|ref|NP_248684.1| - 9.9e-78 261.9 16.1 9.9e-78 261.9 11.1 2.5 2 1 0 2 2 2 1 CRISPR-associated (Cas) DxTHG family Ground-like PF04155.13 gi|15669870|ref|NP_248684.1| - 0.46 10.8 3.1 0.47 10.7 0.1 2.6 2 0 0 2 2 2 0 Ground-like domain PseudoU_synth_1 PF01416.15 gi|15669871|ref|NP_248685.1| - 6.9e-26 90.7 0.0 2.9e-21 75.8 0.0 2.3 2 1 0 2 2 2 2 tRNA pseudouridine synthase Baculo_DNA_bind PF04786.7 gi|15669871|ref|NP_248685.1| - 0.011 14.9 0.2 2.5 7.1 0.0 2.9 3 0 0 3 3 3 0 ssDNA binding protein HATPase_c_5 PF14501.1 gi|15669872|ref|NP_248686.1| - 0.03 14.0 0.1 0.063 12.9 0.0 1.5 1 1 0 1 1 1 0 GHKL domain MarC PF01914.12 gi|15669873|ref|NP_248687.1| - 1.2e-76 256.4 12.9 1.3e-76 256.2 8.9 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.11 gi|15669873|ref|NP_248687.1| - 0.00013 21.5 14.1 0.00093 18.6 8.7 2.2 1 1 0 1 1 1 1 Integral membrane protein TerC family LysE PF01810.13 gi|15669873|ref|NP_248687.1| - 0.0022 17.3 6.6 0.0034 16.6 4.5 1.4 1 1 0 1 1 1 1 LysE type translocator DUF1772 PF08592.6 gi|15669873|ref|NP_248687.1| - 3 7.5 6.3 0.83 9.3 0.3 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF1772) SLA_LP_auto_ag PF05889.8 gi|15669874|ref|NP_248688.1| - 2.1e-36 125.2 0.4 3.1e-36 124.6 0.3 1.2 1 0 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Aminotran_5 PF00266.14 gi|15669874|ref|NP_248688.1| - 6.8e-17 61.2 0.0 9.2e-17 60.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|15669874|ref|NP_248688.1| - 1.2e-09 37.6 0.0 1.6e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|15669874|ref|NP_248688.1| - 1.7e-08 33.9 0.0 2.6e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|15669874|ref|NP_248688.1| - 0.0001 21.4 0.0 0.00016 20.8 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.15 gi|15669874|ref|NP_248688.1| - 0.0078 14.8 0.0 0.022 13.3 0.0 1.7 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain RHH_1 PF01402.16 gi|15669875|ref|NP_248689.1| - 6.4e-06 25.8 3.8 3.2e-05 23.6 0.0 2.9 2 1 1 3 3 3 1 Ribbon-helix-helix protein, copG family UPF0203 PF05254.7 gi|15669875|ref|NP_248689.1| - 0.01 15.6 0.8 0.018 14.8 0.5 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF3829 PF12889.2 gi|15669875|ref|NP_248689.1| - 0.034 13.3 1.9 0.037 13.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) Hat1_N PF10394.4 gi|15669875|ref|NP_248689.1| - 0.14 12.2 1.9 0.17 11.9 1.3 1.1 1 0 0 1 1 1 0 Histone acetyl transferase HAT1 N-terminus TraC PF07820.7 gi|15669875|ref|NP_248689.1| - 0.24 11.6 1.9 11 6.3 0.2 2.1 1 1 1 2 2 2 0 TraC-like protein DUF4337 PF14235.1 gi|15669875|ref|NP_248689.1| - 0.45 10.3 2.8 0.54 10.0 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) RRM_3 PF08777.6 gi|15669875|ref|NP_248689.1| - 0.84 9.5 6.6 0.92 9.3 4.6 1.3 1 1 0 1 1 1 0 RNA binding motif PIN_3 PF13470.1 gi|15669876|ref|NP_248690.1| - 5e-18 65.9 0.0 6.3e-18 65.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.4 gi|15669876|ref|NP_248690.1| - 0.0008 19.4 0.1 0.027 14.5 0.1 2.2 1 1 0 1 1 1 1 PIN domain PIN PF01850.16 gi|15669876|ref|NP_248690.1| - 0.0021 18.3 0.1 0.014 15.7 0.0 2.0 1 1 0 1 1 1 1 PIN domain DUF4411 PF14367.1 gi|15669876|ref|NP_248690.1| - 0.071 12.8 0.2 2.4 7.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4411) RNase_Zc3h12a PF11977.3 gi|15669876|ref|NP_248690.1| - 0.083 12.7 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain Mut7-C PF01927.11 gi|15669876|ref|NP_248690.1| - 0.092 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF39 PF01837.11 gi|15669877|ref|NP_248691.1| - 3.5e-97 325.1 0.1 4.3e-97 324.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF39 Fer4_21 PF14697.1 gi|15669877|ref|NP_248691.1| - 0.0072 16.1 8.6 0.017 14.9 6.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|15669877|ref|NP_248691.1| - 0.0096 15.6 12.8 0.025 14.3 8.4 2.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|15669877|ref|NP_248691.1| - 0.012 15.5 11.6 0.15 12.0 1.0 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|15669877|ref|NP_248691.1| - 0.022 14.6 2.0 0.022 14.6 1.4 2.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|15669877|ref|NP_248691.1| - 0.14 12.5 11.3 0.65 10.4 7.9 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF4043 PF13252.1 gi|15669877|ref|NP_248691.1| - 0.16 10.9 0.0 0.26 10.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4043) Fer4_9 PF13187.1 gi|15669877|ref|NP_248691.1| - 0.18 12.0 14.0 1.9 8.8 9.4 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|15669877|ref|NP_248691.1| - 6.1 6.6 21.5 5.7 6.7 3.2 4.3 3 2 0 3 3 3 0 4Fe-4S binding domain Peptidase_M48 PF01435.13 gi|15669878|ref|NP_248692.1| - 2.2e-42 145.1 0.0 3.6e-42 144.4 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|15669878|ref|NP_248692.1| - 0.00022 20.2 0.8 0.00022 20.2 0.6 1.7 2 1 0 2 2 2 1 BlaR1 peptidase M56 MgtE PF01769.11 gi|15669878|ref|NP_248692.1| - 0.67 10.2 5.8 0.24 11.6 0.3 2.1 2 0 0 2 2 2 0 Divalent cation transporter ABC2_membrane_3 PF12698.2 gi|15669878|ref|NP_248692.1| - 0.94 8.4 6.6 0.78 8.7 0.2 2.1 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF4231 PF14015.1 gi|15669878|ref|NP_248692.1| - 2.9 7.8 4.7 0.45 10.5 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4231)