# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cdc6_C PF09079.11 gi|433637029|ref|YP_007282789.1| - 2.2e-23 82.0 0.2 5e-23 80.9 0.2 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_16 PF13191.6 gi|433637029|ref|YP_007282789.1| - 3.9e-09 37.1 0.5 5.8e-08 33.3 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|433637029|ref|YP_007282789.1| - 1.8e-08 34.9 0.0 0.0028 18.1 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433637029|ref|YP_007282789.1| - 2.9e-08 34.1 0.3 7.8e-06 26.2 0.0 2.7 3 0 0 3 3 2 1 AAA domain TniB PF05621.11 gi|433637029|ref|YP_007282789.1| - 0.0015 17.9 0.1 0.01 15.2 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein Sigma54_activat PF00158.26 gi|433637029|ref|YP_007282789.1| - 0.0024 17.6 0.0 0.0057 16.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|433637029|ref|YP_007282789.1| - 0.0028 17.4 0.0 0.0079 15.9 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|433637029|ref|YP_007282789.1| - 0.0029 16.8 0.0 0.0053 15.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|433637029|ref|YP_007282789.1| - 0.0059 16.7 0.4 3.5 7.7 0.1 2.8 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) T2SSE PF00437.20 gi|433637029|ref|YP_007282789.1| - 0.0075 15.4 0.0 0.015 14.4 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein ATPase_2 PF01637.18 gi|433637029|ref|YP_007282789.1| - 0.01 15.8 0.0 0.15 11.9 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|433637029|ref|YP_007282789.1| - 0.016 15.7 0.0 0.064 13.8 0.0 2.0 1 0 0 1 1 1 0 ABC transporter DEAD PF00270.29 gi|433637029|ref|YP_007282789.1| - 0.036 13.8 0.2 6.6 6.5 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase AAA_18 PF13238.6 gi|433637029|ref|YP_007282789.1| - 0.039 14.5 0.1 0.15 12.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|433637029|ref|YP_007282789.1| - 0.042 13.0 0.0 0.075 12.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_7 PF12775.7 gi|433637029|ref|YP_007282789.1| - 0.047 13.2 0.0 0.081 12.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TIP49 PF06068.13 gi|433637029|ref|YP_007282789.1| - 0.051 12.8 0.5 0.094 11.9 0.0 1.6 2 0 0 2 2 2 0 TIP49 P-loop domain KAP_NTPase PF07693.14 gi|433637029|ref|YP_007282789.1| - 0.056 12.7 0.2 0.19 11.0 0.0 1.8 1 1 0 2 2 2 0 KAP family P-loop domain AAA_assoc_2 PF16193.5 gi|433637029|ref|YP_007282789.1| - 0.059 13.7 0.1 0.18 12.1 0.1 1.8 1 0 0 1 1 1 0 AAA C-terminal domain MSA-2c PF12238.8 gi|433637029|ref|YP_007282789.1| - 0.067 13.2 1.9 0.13 12.2 1.9 1.4 1 0 0 1 1 1 0 Merozoite surface antigen 2c RNA_helicase PF00910.22 gi|433637029|ref|YP_007282789.1| - 0.071 13.5 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase MutS_III PF05192.18 gi|433637029|ref|YP_007282789.1| - 0.11 12.7 4.5 0.51 10.5 4.5 2.0 1 1 0 1 1 1 0 MutS domain III AAA_24 PF13479.6 gi|433637029|ref|YP_007282789.1| - 0.13 12.0 0.8 0.51 10.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain DUF848 PF05852.11 gi|433637029|ref|YP_007282789.1| - 1.5 8.9 5.2 0.54 10.4 1.3 2.2 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Peptidase_S24 PF00717.23 gi|433637030|ref|YP_007282790.1| - 4.5e-06 26.5 0.1 1e-05 25.4 0.1 1.6 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.16 gi|433637031|ref|YP_007282791.1| - 3.1e-14 52.8 0.0 4.7e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.7 gi|433637031|ref|YP_007282791.1| - 5.4e-11 42.9 3.3 1.6e-10 41.4 3.3 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433637031|ref|YP_007282791.1| - 3.6e-09 37.4 0.7 7.9e-09 36.3 0.7 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase MMR_HSR1 PF01926.23 gi|433637032|ref|YP_007282792.1| - 3.2e-15 56.2 0.0 4.3e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|433637032|ref|YP_007282792.1| - 2.1e-11 43.7 0.4 9.8e-05 22.0 0.0 3.3 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|433637032|ref|YP_007282792.1| - 1.8e-07 30.8 0.1 0.00018 21.0 0.1 2.6 2 1 1 3 3 3 2 ADP-ribosylation factor family FeoB_N PF02421.18 gi|433637032|ref|YP_007282792.1| - 3e-05 23.6 0.4 0.0003 20.4 0.4 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|433637032|ref|YP_007282792.1| - 4e-05 23.6 0.0 0.27 11.1 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|433637032|ref|YP_007282792.1| - 0.00014 21.9 0.1 0.00032 20.7 0.0 1.6 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 gi|433637032|ref|YP_007282792.1| - 0.00051 19.5 0.0 0.096 12.1 0.0 2.2 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Septin PF00735.18 gi|433637032|ref|YP_007282792.1| - 0.00056 19.3 0.0 0.00096 18.5 0.0 1.3 1 1 0 1 1 1 1 Septin AAA_18 PF13238.6 gi|433637032|ref|YP_007282792.1| - 0.0016 19.0 0.0 0.0053 17.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|433637032|ref|YP_007282792.1| - 0.0017 17.6 0.0 0.0031 16.7 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain AAA_24 PF13479.6 gi|433637032|ref|YP_007282792.1| - 0.0018 18.0 0.1 0.0036 17.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain Roc PF08477.13 gi|433637032|ref|YP_007282792.1| - 0.0019 18.4 0.0 0.016 15.4 0.0 2.1 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 gi|433637032|ref|YP_007282792.1| - 0.0019 18.6 0.1 0.011 16.2 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|433637032|ref|YP_007282792.1| - 0.006 17.1 0.0 0.0092 16.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter RNA_helicase PF00910.22 gi|433637032|ref|YP_007282792.1| - 0.0071 16.7 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 gi|433637032|ref|YP_007282792.1| - 0.0072 16.6 0.5 0.057 13.7 0.1 2.0 1 1 1 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|433637032|ref|YP_007282792.1| - 0.008 16.1 0.0 0.017 15.0 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|433637032|ref|YP_007282792.1| - 0.0081 16.6 0.0 0.015 15.7 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain Dynamin_N PF00350.23 gi|433637032|ref|YP_007282792.1| - 0.013 15.6 0.0 1.1 9.2 0.1 2.3 1 1 1 2 2 2 0 Dynamin family cobW PF02492.19 gi|433637032|ref|YP_007282792.1| - 0.022 14.4 0.2 1.3 8.5 0.2 2.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RuvB_N PF05496.12 gi|433637032|ref|YP_007282792.1| - 0.027 14.2 0.0 0.053 13.3 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 gi|433637032|ref|YP_007282792.1| - 0.04 13.8 0.0 0.063 13.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|433637032|ref|YP_007282792.1| - 0.055 12.7 0.0 0.16 11.2 0.0 1.7 2 1 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 gi|433637032|ref|YP_007282792.1| - 0.069 13.4 0.0 0.13 12.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|433637032|ref|YP_007282792.1| - 0.082 12.5 0.1 0.18 11.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|433637032|ref|YP_007282792.1| - 0.083 12.7 0.0 7 6.4 0.0 2.9 2 1 0 3 3 3 0 Conserved hypothetical ATP binding protein Gtr1_RagA PF04670.12 gi|433637032|ref|YP_007282792.1| - 0.085 12.2 0.0 0.93 8.8 0.0 2.2 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF1184 PF06683.11 gi|433637032|ref|YP_007282792.1| - 0.12 11.9 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1184) DUF2073 PF09846.9 gi|433637033|ref|YP_007282793.1| - 1.1e-43 147.3 0.1 1.4e-43 147.0 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) DUF2072 PF09845.9 gi|433637034|ref|YP_007282794.1| - 1e-34 119.7 1.3 1.4e-16 60.9 0.1 2.2 2 0 0 2 2 2 2 Zn-ribbon containing protein DUF1451 PF07295.11 gi|433637034|ref|YP_007282794.1| - 0.18 11.8 1.8 0.33 11.0 1.2 1.7 2 0 0 2 2 2 0 Zinc-ribbon containing domain Zn-ribbon_8 PF09723.10 gi|433637034|ref|YP_007282794.1| - 0.36 11.0 3.1 0.85 9.8 3.1 1.6 1 0 0 1 1 1 0 Zinc ribbon domain FAM104 PF15434.6 gi|433637034|ref|YP_007282794.1| - 9.4 6.8 7.6 1.6 9.3 2.3 2.2 2 1 0 2 2 2 0 Family 104 Methyltransf_11 PF08241.12 gi|433637038|ref|YP_007282798.1| - 8.3e-23 80.9 0.0 1.4e-22 80.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637038|ref|YP_007282798.1| - 1.3e-18 67.5 0.0 2.2e-18 66.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637038|ref|YP_007282798.1| - 8.6e-14 51.6 0.0 1.2e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433637038|ref|YP_007282798.1| - 7.7e-12 45.3 0.0 1e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637038|ref|YP_007282798.1| - 2.1e-10 41.2 0.0 3.5e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637038|ref|YP_007282798.1| - 2.1e-09 37.1 0.0 4e-09 36.1 0.0 1.4 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_2 PF00891.18 gi|433637038|ref|YP_007282798.1| - 8.2e-06 25.3 0.0 1e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_9 PF08003.11 gi|433637038|ref|YP_007282798.1| - 0.00018 20.5 0.0 0.00034 19.7 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|433637038|ref|YP_007282798.1| - 0.0003 20.2 0.0 0.00039 19.8 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|433637038|ref|YP_007282798.1| - 0.0039 17.2 0.0 0.0063 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|433637038|ref|YP_007282798.1| - 0.013 15.3 0.0 0.017 14.9 0.0 1.3 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Fibrillarin PF01269.17 gi|433637038|ref|YP_007282798.1| - 0.019 14.1 0.0 0.034 13.3 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin MTS PF05175.14 gi|433637038|ref|YP_007282798.1| - 0.019 14.5 0.0 0.051 13.1 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain N6_N4_Mtase PF01555.18 gi|433637038|ref|YP_007282798.1| - 0.027 14.2 0.0 2.7 7.6 0.0 2.2 2 0 0 2 2 2 0 DNA methylase Methyltransf_8 PF05148.15 gi|433637038|ref|YP_007282798.1| - 0.13 12.1 0.0 0.75 9.6 0.0 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase DUF1684 PF07920.11 gi|433637039|ref|YP_007282799.1| - 9.5e-46 155.6 0.1 1.3e-45 155.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1684) tRNA-synt_2 PF00152.20 gi|433637040|ref|YP_007282800.1| - 3.8e-75 252.9 0.0 4.4e-75 252.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|433637040|ref|YP_007282800.1| - 9.2e-13 48.0 0.2 1.6e-12 47.2 0.2 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain PH_17 PF18012.1 gi|433637040|ref|YP_007282800.1| - 0.05 13.3 0.1 0.098 12.4 0.1 1.4 1 0 0 1 1 1 0 PH domain Helicase_C_2 PF13307.6 gi|433637041|ref|YP_007282801.1| - 2.8e-31 109.0 0.0 6.4e-31 107.8 0.0 1.5 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|433637041|ref|YP_007282801.1| - 1.3e-07 31.4 0.0 3.4e-07 30.1 0.0 1.7 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|433637041|ref|YP_007282801.1| - 0.00025 21.1 0.0 0.0072 16.3 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit PhoH PF02562.16 gi|433637041|ref|YP_007282801.1| - 0.0093 15.4 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein DEAD PF00270.29 gi|433637041|ref|YP_007282801.1| - 0.015 15.0 0.0 1 9.1 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|433637041|ref|YP_007282801.1| - 0.048 12.9 0.0 1.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Uds1 PF15456.6 gi|433637041|ref|YP_007282801.1| - 0.049 13.8 0.1 0.13 12.4 0.0 1.7 2 0 0 2 2 2 0 Up-regulated During Septation AAA_16 PF13191.6 gi|433637041|ref|YP_007282801.1| - 0.06 13.7 0.7 0.86 10.0 0.1 2.8 3 1 0 3 3 3 0 AAA ATPase domain HBB PF06777.11 gi|433637041|ref|YP_007282801.1| - 0.074 12.7 0.0 0.24 11.0 0.0 1.8 2 0 0 2 2 2 0 Helical and beta-bridge domain CK2S PF15011.6 gi|433637041|ref|YP_007282801.1| - 0.08 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Casein Kinase 2 substrate AAA_22 PF13401.6 gi|433637041|ref|YP_007282801.1| - 0.1 12.9 0.0 2.5 8.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain Phage_holin_3_6 PF07332.11 gi|433637042|ref|YP_007282802.1| - 0.0011 19.0 4.7 0.0012 18.8 4.7 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III Metal_resist PF13801.6 gi|433637042|ref|YP_007282802.1| - 0.11 12.7 0.8 1.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Heavy-metal resistance LcnG-beta PF11632.8 gi|433637042|ref|YP_007282802.1| - 0.19 11.7 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 Lactococcin G-beta S_4TM PF18159.1 gi|433637042|ref|YP_007282802.1| - 0.28 10.4 0.3 0.33 10.2 0.3 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain CBS PF00571.28 gi|433637043|ref|YP_007282803.1| - 1.4e-27 95.9 6.3 1.4e-15 57.5 2.5 2.1 2 0 0 2 2 2 2 CBS domain TmoB PF06234.12 gi|433637043|ref|YP_007282803.1| - 1.6 8.9 5.8 0.48 10.5 2.5 1.9 2 1 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) DUF4191 PF13829.6 gi|433637044|ref|YP_007282804.1| - 0.18 11.2 0.1 0.18 11.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) CstA PF02554.14 gi|433637045|ref|YP_007282805.1| - 0.014 14.3 4.3 0.017 14.0 4.3 1.1 1 0 0 1 1 1 0 Carbon starvation protein CstA 7TMR-DISM_7TM PF07695.11 gi|433637045|ref|YP_007282805.1| - 0.14 12.1 4.1 0.21 11.5 3.7 1.5 1 1 0 1 1 1 0 7TM diverse intracellular signalling TPP_enzyme_N PF02776.18 gi|433637046|ref|YP_007282806.1| - 1.4e-40 138.7 3.3 2.9e-37 127.9 0.5 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|433637046|ref|YP_007282806.1| - 2e-36 125.1 0.1 4.9e-36 123.8 0.1 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433637046|ref|YP_007282806.1| - 1.2e-31 109.2 0.6 2.2e-31 108.4 0.6 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Porphyrn_cat_1 PF18206.1 gi|433637048|ref|YP_007282808.1| - 0.067 13.8 0.0 0.09 13.4 0.0 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Phage_TTP_1 PF04630.12 gi|433637048|ref|YP_007282808.1| - 0.082 12.2 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Phage tail tube protein EamA PF00892.20 gi|433637049|ref|YP_007282809.1| - 4.5e-42 143.5 30.7 4.1e-23 82.1 9.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 gi|433637049|ref|YP_007282809.1| - 0.0047 16.1 3.5 0.0047 16.1 3.5 2.0 2 0 0 2 2 2 1 Magnesium transporter NIPA Nuc_sug_transp PF04142.15 gi|433637049|ref|YP_007282809.1| - 0.031 13.5 1.4 0.076 12.2 1.3 1.8 1 1 0 1 1 1 0 Nucleotide-sugar transporter UAA PF08449.11 gi|433637049|ref|YP_007282809.1| - 0.13 11.5 3.5 3.8 6.6 0.1 2.2 2 0 0 2 2 2 0 UAA transporter family TMEM234 PF10639.9 gi|433637049|ref|YP_007282809.1| - 6.8 6.8 10.8 6.3 6.9 0.7 3.1 3 0 0 3 3 3 0 Putative transmembrane family 234 Rib_5-P_isom_A PF06026.14 gi|433637050|ref|YP_007282810.1| - 1.1e-60 204.2 0.0 1.3e-60 203.9 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|433637050|ref|YP_007282810.1| - 1.6e-06 28.2 0.4 7.4e-05 22.7 0.2 2.2 2 0 0 2 2 2 2 DeoR C terminal sensor domain RP1-2 PF12042.8 gi|433637050|ref|YP_007282810.1| - 0.045 13.6 2.5 0.069 13.0 2.5 1.2 1 0 0 1 1 1 0 Tubuliform egg casing silk strands structural domain PepSY_2 PF13670.6 gi|433637051|ref|YP_007282811.1| - 0.09 12.8 0.5 0.15 12.1 0.5 1.4 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Phage_holin_3_6 PF07332.11 gi|433637051|ref|YP_007282811.1| - 1.6 8.8 8.3 0.19 11.7 4.0 1.7 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III FMN_dh PF01070.18 gi|433637052|ref|YP_007282812.1| - 2.7e-30 105.6 11.4 6.2e-21 74.8 10.7 2.4 2 1 0 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|433637052|ref|YP_007282812.1| - 0.00065 18.8 10.7 0.013 14.5 8.3 2.8 1 1 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|433637052|ref|YP_007282812.1| - 0.00085 18.5 5.1 0.0023 17.2 5.1 1.7 1 1 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|433637052|ref|YP_007282812.1| - 0.043 13.3 1.1 3.7 7.0 0.1 2.3 2 0 0 2 2 2 0 Histidine biosynthesis protein DUF1931 PF09123.11 gi|433637054|ref|YP_007282814.1| - 0.00026 21.1 1.5 0.00028 21.0 1.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) CBFD_NFYB_HMF PF00808.23 gi|433637054|ref|YP_007282814.1| - 0.0016 18.7 0.1 0.0024 18.1 0.1 1.5 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone GIY-YIG PF01541.24 gi|433637055|ref|YP_007282815.1| - 5.8e-17 61.7 0.1 6.6e-17 61.6 0.1 1.0 1 0 0 1 1 1 1 GIY-YIG catalytic domain T5orf172 PF10544.9 gi|433637055|ref|YP_007282815.1| - 0.018 15.6 0.3 0.021 15.4 0.3 1.2 1 0 0 1 1 1 0 T5orf172 domain FMN_red PF03358.15 gi|433637056|ref|YP_007282816.1| - 6.9e-31 107.1 0.0 8.4e-31 106.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|433637056|ref|YP_007282816.1| - 1.2e-10 41.4 0.0 1.9e-10 40.8 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|433637056|ref|YP_007282816.1| - 0.079 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin domain PGM_PMM_I PF02878.16 gi|433637059|ref|YP_007282819.1| - 2e-37 127.9 0.0 3.7e-37 127.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|433637059|ref|YP_007282819.1| - 7.3e-25 87.6 1.9 9.3e-25 87.2 0.3 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|433637059|ref|YP_007282819.1| - 6.3e-22 77.9 0.0 1.2e-21 77.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|433637059|ref|YP_007282819.1| - 2.5e-16 59.6 0.1 9.6e-16 57.7 0.1 2.1 1 1 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Unstab_antitox PF09720.10 gi|433637059|ref|YP_007282819.1| - 0.24 11.5 5.6 11 6.2 0.1 3.3 2 1 0 2 2 2 0 Putative addiction module component Ogr_Delta PF04606.12 gi|433637060|ref|YP_007282820.1| - 0.0081 16.1 0.4 0.05 13.6 0.2 2.0 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger DNA_ligase_ZBD PF03119.16 gi|433637060|ref|YP_007282820.1| - 0.023 14.7 2.3 0.12 12.4 2.3 2.3 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain NUDIX PF00293.28 gi|433637061|ref|YP_007282821.1| - 4.7e-20 72.0 1.1 7e-20 71.4 1.1 1.2 1 0 0 1 1 1 1 NUDIX domain NUDIX PF00293.28 gi|433637062|ref|YP_007282822.1| - 2.7e-14 53.3 0.2 3.2e-14 53.1 0.2 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|433637062|ref|YP_007282822.1| - 0.047 13.7 0.1 0.1 12.6 0.1 1.4 1 1 0 1 1 1 0 NUDIX domain Me-amine-dh_L PF02975.14 gi|433637062|ref|YP_007282822.1| - 0.047 14.2 0.0 0.11 13.0 0.0 1.6 1 1 0 1 1 1 0 Methylamine dehydrogenase, L chain Acetyltransf_7 PF13508.7 gi|433637063|ref|YP_007282823.1| - 6.8e-10 39.2 0.0 9.4e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433637063|ref|YP_007282823.1| - 5.1e-09 36.4 0.0 6e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433637063|ref|YP_007282823.1| - 2e-07 31.0 0.0 3.1e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433637063|ref|YP_007282823.1| - 0.0024 18.0 0.0 0.005 16.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|433637063|ref|YP_007282823.1| - 0.0052 16.9 0.0 0.033 14.3 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433637063|ref|YP_007282823.1| - 0.013 15.5 0.1 0.047 13.7 0.1 1.8 1 1 0 1 1 1 0 FR47-like protein PanZ PF12568.8 gi|433637063|ref|YP_007282823.1| - 0.035 13.8 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ ThiS PF02597.20 gi|433637064|ref|YP_007282824.1| - 0.00055 20.5 0.0 0.00068 20.2 0.0 1.3 1 1 0 1 1 1 1 ThiS family Nramp PF01566.18 gi|433637065|ref|YP_007282825.1| - 9.7e-12 44.5 20.1 5e-11 42.2 18.5 2.3 1 1 1 2 2 2 1 Natural resistance-associated macrophage protein TENA_THI-4 PF03070.16 gi|433637066|ref|YP_007282826.1| - 8.7e-47 159.6 0.9 9.7e-47 159.5 0.9 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Haem_oxygenas_2 PF14518.6 gi|433637066|ref|YP_007282826.1| - 0.08 12.7 4.2 0.14 11.9 4.2 1.5 1 1 0 1 1 1 0 Iron-containing redox enzyme Peptidase_S66C PF17676.1 gi|433637067|ref|YP_007282827.1| - 2.7e-25 89.3 0.0 4e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain Peptidase_S66 PF02016.15 gi|433637067|ref|YP_007282827.1| - 3.5e-25 88.5 0.0 5.7e-25 87.8 0.0 1.4 1 0 0 1 1 1 1 LD-carboxypeptidase N-terminal domain zf-Di19 PF05605.12 gi|433637068|ref|YP_007282828.1| - 0.059 13.7 2.8 0.43 10.9 3.1 1.9 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_9 PF16293.5 gi|433637068|ref|YP_007282828.1| - 0.16 11.8 0.2 0.29 11.0 0.2 1.4 1 1 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Rep_fac_C PF08542.11 gi|433637069|ref|YP_007282829.1| - 6.2e-22 77.8 0.0 1.4e-21 76.7 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|433637069|ref|YP_007282829.1| - 4.7e-17 62.7 0.0 4.4e-16 59.5 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|433637069|ref|YP_007282829.1| - 1.3e-15 57.5 0.0 7.2e-12 45.4 0.0 2.2 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA_16 PF13191.6 gi|433637069|ref|YP_007282829.1| - 9.6e-06 26.1 0.9 0.015 15.7 0.0 2.9 2 2 1 3 3 3 2 AAA ATPase domain AAA_assoc_2 PF16193.5 gi|433637069|ref|YP_007282829.1| - 2.7e-05 24.4 0.2 7.7e-05 22.9 0.2 1.9 1 0 0 1 1 1 1 AAA C-terminal domain RuvB_N PF05496.12 gi|433637069|ref|YP_007282829.1| - 2.8e-05 23.9 0.0 0.00092 19.0 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|433637069|ref|YP_007282829.1| - 5.8e-05 23.1 0.0 0.0001 22.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|433637069|ref|YP_007282829.1| - 0.00039 20.4 0.0 0.00078 19.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|433637069|ref|YP_007282829.1| - 0.00058 20.2 0.1 0.46 10.7 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_3 PF07726.11 gi|433637069|ref|YP_007282829.1| - 0.0014 18.5 0.0 0.0028 17.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ResIII PF04851.15 gi|433637069|ref|YP_007282829.1| - 0.0056 16.7 0.0 0.038 14.0 0.0 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DNA_pol3_delta PF06144.13 gi|433637069|ref|YP_007282829.1| - 0.012 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit IstB_IS21 PF01695.17 gi|433637069|ref|YP_007282829.1| - 0.014 15.1 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|433637069|ref|YP_007282829.1| - 0.017 14.8 0.0 0.52 10.0 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|433637069|ref|YP_007282829.1| - 0.018 14.6 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|433637069|ref|YP_007282829.1| - 0.021 14.2 0.0 3.1 7.1 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 gi|433637069|ref|YP_007282829.1| - 0.027 13.7 0.0 0.11 11.7 0.0 1.8 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_2 PF07724.14 gi|433637069|ref|YP_007282829.1| - 0.032 14.4 0.0 0.2 11.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|433637069|ref|YP_007282829.1| - 0.035 14.1 0.0 0.19 11.7 0.0 2.1 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) SNF2_N PF00176.23 gi|433637069|ref|YP_007282829.1| - 0.036 12.8 0.0 0.054 12.2 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF3400 PF11880.8 gi|433637069|ref|YP_007282829.1| - 0.044 13.3 0.0 0.097 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) AAA_18 PF13238.6 gi|433637069|ref|YP_007282829.1| - 0.084 13.4 0.0 0.32 11.5 0.0 2.0 1 1 1 2 2 2 0 AAA domain TetR_C_12 PF16914.5 gi|433637069|ref|YP_007282829.1| - 0.11 12.7 0.0 0.31 11.2 0.0 1.8 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal GAF_2 PF13185.6 gi|433637070|ref|YP_007282830.1| - 4e-31 108.1 2.6 2.9e-15 56.8 0.2 2.7 2 0 0 2 2 2 2 GAF domain GAF PF01590.26 gi|433637070|ref|YP_007282830.1| - 3.9e-18 66.4 0.0 1.4e-08 35.5 0.0 2.8 3 0 0 3 3 3 2 GAF domain GAF_3 PF13492.6 gi|433637070|ref|YP_007282830.1| - 2.5e-17 63.4 0.0 4.5e-07 30.3 0.0 3.6 3 0 0 3 3 3 3 GAF domain HATPase_c PF02518.26 gi|433637070|ref|YP_007282830.1| - 6.9e-14 52.3 0.0 1.5e-13 51.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|433637070|ref|YP_007282830.1| - 3.9e-11 42.8 5.1 6.1e-11 42.2 0.2 3.5 3 1 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|433637070|ref|YP_007282830.1| - 1.2e-06 28.4 0.1 3e-05 23.9 0.1 3.1 3 0 0 3 3 3 1 PAS domain PAS_4 PF08448.10 gi|433637070|ref|YP_007282830.1| - 1.9e-06 28.1 2.1 2e-06 28.0 0.1 2.2 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|433637070|ref|YP_007282830.1| - 2.6e-05 24.4 0.0 8.2e-05 22.8 0.0 1.9 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|433637070|ref|YP_007282830.1| - 3.7e-05 23.7 0.0 9.3e-05 22.4 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|433637070|ref|YP_007282830.1| - 0.0045 17.0 1.1 0.01 15.8 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain TetR_C_33 PF13305.6 gi|433637070|ref|YP_007282830.1| - 1.7 9.4 5.3 3.1 8.6 0.0 3.7 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain TIP49 PF06068.13 gi|433637074|ref|YP_007282834.1| - 0.076 12.2 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain PPP1R26_N PF15740.5 gi|433637074|ref|YP_007282834.1| - 0.092 11.4 0.2 0.12 11.0 0.2 1.1 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 26 N-terminus Relaxase PF03432.14 gi|433637075|ref|YP_007282835.1| - 0.023 14.3 0.1 0.057 13.0 0.0 1.6 1 1 0 1 1 1 0 Relaxase/Mobilisation nuclease domain MCD_N PF17408.2 gi|433637077|ref|YP_007282837.1| - 0.015 15.5 0.2 0.027 14.6 0.1 1.5 1 1 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain HTH_20 PF12840.7 gi|433637077|ref|YP_007282837.1| - 0.035 14.2 1.8 0.06 13.4 1.8 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|433637077|ref|YP_007282837.1| - 0.061 13.2 0.1 0.087 12.7 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF4157 PF13699.6 gi|433637078|ref|YP_007282838.1| - 8.8e-32 109.2 1.3 3.3e-31 107.3 1.3 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) GH-E PF14410.6 gi|433637078|ref|YP_007282838.1| - 2e-24 85.7 3.2 4.5e-24 84.6 3.2 1.6 1 0 0 1 1 1 1 HNH/ENDO VII superfamily nuclease with conserved GHE residues Ank_5 PF13857.6 gi|433637079|ref|YP_007282839.1| - 3.5e-25 87.7 1.4 2.2e-09 37.4 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 gi|433637079|ref|YP_007282839.1| - 1.9e-18 66.8 0.1 9.1e-14 51.8 0.2 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 gi|433637079|ref|YP_007282839.1| - 2.5e-17 63.0 0.0 3.1e-09 37.2 0.0 2.6 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 gi|433637079|ref|YP_007282839.1| - 2.2e-14 52.1 0.0 0.00025 21.2 0.0 4.6 5 0 0 5 5 5 3 Ankyrin repeat Ank PF00023.30 gi|433637079|ref|YP_007282839.1| - 4.2e-11 42.8 0.1 0.0017 18.7 0.3 3.9 4 0 0 4 4 4 2 Ankyrin repeat Glycos_transf_N PF04413.16 gi|433637079|ref|YP_007282839.1| - 0.066 12.9 0.0 0.091 12.4 0.0 1.3 1 0 0 1 1 1 0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PQQ PF01011.21 gi|433637081|ref|YP_007282841.1| - 0.003 17.4 0.1 0.2 11.7 0.0 2.9 3 1 0 3 3 3 1 PQQ enzyme repeat PQQ_2 PF13360.6 gi|433637081|ref|YP_007282841.1| - 0.096 12.3 0.0 0.2 11.2 0.0 1.3 1 1 0 1 1 1 0 PQQ-like domain Oxidored_FMN PF00724.20 gi|433637083|ref|YP_007282843.1| - 6e-64 216.5 0.0 7e-64 216.2 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 gi|433637083|ref|YP_007282843.1| - 0.019 14.1 0.0 0.035 13.2 0.0 1.4 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) Cupin_2 PF07883.11 gi|433637084|ref|YP_007282844.1| - 2.4e-09 36.7 1.3 6.9e-09 35.3 1.3 1.8 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|433637084|ref|YP_007282844.1| - 0.0052 16.5 0.3 0.014 15.1 0.3 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|433637084|ref|YP_007282844.1| - 0.0085 16.0 0.3 0.016 15.1 0.2 1.5 1 1 0 1 1 1 1 AraC-like ligand binding domain Zn_Tnp_IS1595 PF12760.7 gi|433637084|ref|YP_007282844.1| - 0.025 14.6 0.2 0.039 13.9 0.2 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Glyoxalase_3 PF13468.6 gi|433637084|ref|YP_007282844.1| - 0.095 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase-like domain HypA PF01155.19 gi|433637084|ref|YP_007282844.1| - 0.11 12.6 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nudix_N_2 PF14803.6 gi|433637084|ref|YP_007282844.1| - 0.18 11.8 3.6 0.45 10.5 3.6 1.6 1 0 0 1 1 1 0 Nudix N-terminal DUF2270 PF10028.9 gi|433637085|ref|YP_007282845.1| - 2.3e-74 249.0 6.2 2.6e-74 248.8 6.2 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2270) DUF485 PF04341.12 gi|433637085|ref|YP_007282845.1| - 0.057 13.4 0.7 0.057 13.4 0.7 2.2 2 1 0 2 2 2 0 Protein of unknown function, DUF485 SPC12 PF06645.13 gi|433637085|ref|YP_007282845.1| - 0.18 11.9 1.9 2.8 8.1 0.3 2.4 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) MASE3 PF17159.4 gi|433637085|ref|YP_007282845.1| - 1.9 8.0 6.8 1.7 8.2 0.4 2.1 2 0 0 2 2 2 0 Membrane-associated sensor domain FA_desaturase PF00487.24 gi|433637085|ref|YP_007282845.1| - 5.3 6.8 9.8 3.4 7.5 2.0 2.1 1 1 1 2 2 2 0 Fatty acid desaturase NAD_binding_10 PF13460.6 gi|433637086|ref|YP_007282846.1| - 1.6e-44 152.0 0.8 1.8e-44 151.8 0.8 1.0 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|433637086|ref|YP_007282846.1| - 1.1e-10 41.5 0.0 1.3e-10 41.3 0.0 1.2 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|433637086|ref|YP_007282846.1| - 2.7e-08 33.6 0.0 5.5e-08 32.6 0.0 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|433637086|ref|YP_007282846.1| - 0.015 14.4 0.1 0.065 12.3 0.1 1.9 1 1 0 1 1 1 0 RmlD substrate binding domain HIM1 PF08732.10 gi|433637086|ref|YP_007282846.1| - 0.018 14.6 0.0 0.062 12.8 0.0 1.8 1 1 1 2 2 2 0 HIM1 KR PF08659.10 gi|433637086|ref|YP_007282846.1| - 0.023 14.6 0.3 3.6 7.5 0.2 2.4 1 1 0 2 2 2 0 KR domain 3Beta_HSD PF01073.19 gi|433637086|ref|YP_007282846.1| - 0.024 13.7 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family GNAT_like PF18407.1 gi|433637086|ref|YP_007282846.1| - 0.083 13.2 1.8 0.13 12.7 0.2 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyltransferase like domain GDP_Man_Dehyd PF16363.5 gi|433637086|ref|YP_007282846.1| - 0.17 11.3 0.0 0.54 9.6 0.0 1.8 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase adh_short PF00106.25 gi|433637087|ref|YP_007282847.1| - 6.2e-31 107.4 0.0 7.1e-31 107.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|433637087|ref|YP_007282847.1| - 1.9e-29 102.9 0.0 2.3e-29 102.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|433637087|ref|YP_007282847.1| - 4.8e-09 36.4 0.0 6.3e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433637087|ref|YP_007282847.1| - 0.00011 21.7 0.0 0.00035 20.1 0.0 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|433637087|ref|YP_007282847.1| - 0.00013 21.2 0.0 0.00017 20.9 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|433637087|ref|YP_007282847.1| - 0.0021 17.2 0.0 0.0032 16.6 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|433637087|ref|YP_007282847.1| - 0.0054 16.3 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3HCDH_N PF02737.18 gi|433637087|ref|YP_007282847.1| - 0.028 14.3 1.0 0.045 13.6 1.0 1.4 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDP_Man_Dehyd PF16363.5 gi|433637087|ref|YP_007282847.1| - 0.048 13.0 0.0 0.1 12.0 0.0 1.5 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase DUF417 PF04224.12 gi|433637088|ref|YP_007282848.1| - 0.00019 21.0 8.3 0.0067 16.0 0.1 2.2 1 1 0 2 2 2 2 Protein of unknown function, DUF417 DoxX PF07681.12 gi|433637088|ref|YP_007282848.1| - 0.00056 20.4 6.1 0.00056 20.4 6.1 1.7 2 0 0 2 2 2 1 DoxX DoxX_2 PF13564.6 gi|433637088|ref|YP_007282848.1| - 0.0044 17.1 8.1 0.0083 16.2 8.1 1.7 1 1 0 1 1 1 1 DoxX-like family MFS_1 PF07690.16 gi|433637089|ref|YP_007282849.1| - 2.3e-40 138.6 39.6 2.3e-40 138.6 39.6 2.1 2 1 0 2 2 2 1 Major Facilitator Superfamily Na_H_Exchanger PF00999.21 gi|433637090|ref|YP_007282850.1| - 1.1e-30 106.7 55.6 1.3e-30 106.4 55.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Na_H_antiporter PF03553.14 gi|433637092|ref|YP_007282852.1| - 1.5e-78 264.1 22.6 1.5e-78 264.1 22.6 2.7 3 0 0 3 3 3 1 Na+/H+ antiporter family CitMHS PF03600.16 gi|433637092|ref|YP_007282852.1| - 0.00038 19.8 46.5 0.12 11.6 12.1 2.7 1 1 1 2 2 2 2 Citrate transporter MarR_2 PF12802.7 gi|433637093|ref|YP_007282853.1| - 0.00093 19.0 0.1 0.0021 17.9 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433637093|ref|YP_007282853.1| - 0.0036 17.1 0.1 0.018 14.9 0.1 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_29 PF13551.6 gi|433637093|ref|YP_007282853.1| - 0.03 14.3 0.1 0.12 12.5 0.1 2.1 1 1 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|433637093|ref|YP_007282853.1| - 0.039 13.9 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|433637093|ref|YP_007282853.1| - 0.041 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|433637093|ref|YP_007282853.1| - 0.13 12.7 0.0 0.26 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|433637093|ref|YP_007282853.1| - 0.17 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family OsmC PF02566.19 gi|433637094|ref|YP_007282854.1| - 2.2e-11 44.1 0.1 5.2e-11 42.9 0.0 1.6 2 0 0 2 2 2 1 OsmC-like protein PAS_8 PF13188.7 gi|433637095|ref|YP_007282855.1| - 0.0016 18.4 0.2 0.03 14.3 0.0 3.0 3 0 0 3 3 3 1 PAS domain PAS_4 PF08448.10 gi|433637095|ref|YP_007282855.1| - 0.0045 17.2 4.5 0.17 12.1 0.1 3.1 3 0 0 3 3 3 2 PAS fold CortBP2 PF09727.9 gi|433637095|ref|YP_007282855.1| - 0.035 14.0 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 Cortactin-binding protein-2 RTC PF01137.21 gi|433637096|ref|YP_007282856.1| - 0.047 12.9 0.1 0.57 9.3 0.0 2.1 2 0 0 2 2 2 0 RNA 3'-terminal phosphate cyclase PT-VENN PF04829.13 gi|433637096|ref|YP_007282856.1| - 0.64 10.1 0.0 0.64 10.1 0.0 2.9 3 1 0 3 3 3 0 Pre-toxin domain with VENN motif 3HCDH_RFF PF18321.1 gi|433637097|ref|YP_007282857.1| - 0.0099 16.3 0.2 0.26 11.8 0.1 2.8 3 0 0 3 3 3 1 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain tRNA-synt_2c PF01411.19 gi|433637098|ref|YP_007282858.1| - 1.1e-114 384.0 0.0 1.4e-114 383.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|433637098|ref|YP_007282858.1| - 5.2e-16 59.3 4.3 7.5e-16 58.8 2.7 2.1 2 0 0 2 2 2 1 DHHA1 domain tRNA_SAD PF07973.14 gi|433637098|ref|YP_007282858.1| - 6e-12 45.5 0.7 6e-12 45.5 0.7 1.8 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain CHASE3 PF05227.13 gi|433637098|ref|YP_007282858.1| - 2 8.3 8.0 0.38 10.7 3.4 2.2 2 0 0 2 2 2 0 CHASE3 domain Trypsin_2 PF13365.6 gi|433637101|ref|YP_007282861.1| - 2.2e-26 93.5 4.0 4.6e-26 92.5 4.0 1.5 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|433637101|ref|YP_007282861.1| - 2.1e-09 37.6 0.3 4e-09 36.7 0.3 1.5 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|433637101|ref|YP_007282861.1| - 3.2e-06 27.1 1.5 1.2e-05 25.2 1.5 1.8 1 1 0 1 1 1 1 Trypsin Peptidase_S3 PF00944.19 gi|433637101|ref|YP_007282861.1| - 0.022 14.6 0.3 0.022 14.6 0.3 2.0 2 0 0 2 2 2 0 Alphavirus core protein Gly_reductase PF09338.11 gi|433637101|ref|YP_007282861.1| - 0.043 12.2 0.4 0.062 11.7 0.4 1.1 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase component B subunits Peptidase_S46 PF10459.9 gi|433637101|ref|YP_007282861.1| - 0.075 11.7 0.9 0.12 11.0 0.9 1.2 1 0 0 1 1 1 0 Peptidase S46 Peptidase_S29 PF02907.15 gi|433637101|ref|YP_007282861.1| - 0.083 12.6 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease THUMP PF02926.17 gi|433637102|ref|YP_007282862.1| - 1.4e-07 31.7 0.0 2.8e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 THUMP domain DnaJ_CXXCXGXG PF00684.19 gi|433637102|ref|YP_007282862.1| - 0.0018 18.6 0.5 0.0018 18.6 0.5 2.4 3 0 0 3 3 3 1 DnaJ central domain HHA PF05321.11 gi|433637102|ref|YP_007282862.1| - 0.079 13.3 0.2 1.3 9.4 0.0 2.5 2 0 0 2 2 2 0 Haemolysin expression modulating protein Anti-TRAP PF15777.5 gi|433637102|ref|YP_007282862.1| - 1.1 9.3 10.1 0.95 9.5 4.8 3.2 2 1 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF3382 PF11862.8 gi|433637103|ref|YP_007282863.1| - 0.11 12.8 1.0 0.12 12.6 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) RHH_1 PF01402.21 gi|433637104|ref|YP_007282864.1| - 1.2e-09 37.7 0.2 1.2e-09 37.7 0.2 2.5 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|433637104|ref|YP_007282864.1| - 0.00094 19.3 0.1 0.0018 18.4 0.0 1.5 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system ParE_toxin PF05016.15 gi|433637105|ref|YP_007282865.1| - 1.3e-07 32.1 0.4 1.6e-07 31.9 0.4 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE NBD_C PF17042.5 gi|433637106|ref|YP_007282866.1| - 0.13 12.7 2.4 0.17 12.4 2.4 1.3 1 1 0 1 1 1 0 Nucleotide-binding C-terminal domain RNase_HII PF01351.18 gi|433637107|ref|YP_007282867.1| - 9.5e-36 123.5 0.0 1.3e-35 123.1 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease HII Peptidase_M3 PF01432.20 gi|433637109|ref|YP_007282869.1| - 3.1e-68 231.1 0.1 5.6e-68 230.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.10 gi|433637109|ref|YP_007282869.1| - 1.2e-23 83.2 0.5 5.5e-23 81.0 0.0 2.5 2 0 0 2 2 2 1 Oligopeptidase F Sipho_Gp157 PF05565.11 gi|433637109|ref|YP_007282869.1| - 1 9.4 5.2 0.48 10.4 1.5 2.3 3 0 0 3 3 3 0 Siphovirus Gp157 AAA PF00004.29 gi|433637110|ref|YP_007282870.1| - 5.5e-44 149.8 0.6 1.9e-43 148.0 0.1 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|433637110|ref|YP_007282870.1| - 9.7e-16 57.3 0.5 2.5e-15 56.0 0.5 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|433637110|ref|YP_007282870.1| - 1.2e-07 32.0 0.0 3e-07 30.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|433637110|ref|YP_007282870.1| - 3.5e-06 27.1 1.6 1.2e-05 25.4 0.3 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|433637110|ref|YP_007282870.1| - 4.5e-06 26.5 0.0 1.8e-05 24.6 0.0 1.9 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|433637110|ref|YP_007282870.1| - 7e-06 26.5 2.7 0.00053 20.4 0.0 3.1 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 gi|433637110|ref|YP_007282870.1| - 0.0002 20.6 0.0 0.00036 19.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|433637110|ref|YP_007282870.1| - 0.00033 21.2 0.2 0.0048 17.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|433637110|ref|YP_007282870.1| - 0.00058 20.2 4.8 0.0039 17.5 0.9 2.9 2 1 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|433637110|ref|YP_007282870.1| - 0.0018 17.6 0.1 0.0047 16.2 0.1 1.7 1 1 1 2 2 2 1 TIP49 P-loop domain Mg_chelatase PF01078.21 gi|433637110|ref|YP_007282870.1| - 0.0018 17.7 0.1 0.0039 16.6 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Prot_ATP_ID_OB PF16450.5 gi|433637110|ref|YP_007282870.1| - 0.0032 17.4 0.4 0.0098 15.8 0.1 2.0 2 0 0 2 2 1 1 Proteasomal ATPase OB C-terminal domain AAA_14 PF13173.6 gi|433637110|ref|YP_007282870.1| - 0.0036 17.3 0.0 0.0076 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|433637110|ref|YP_007282870.1| - 0.0044 16.8 0.0 0.0088 15.8 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|433637110|ref|YP_007282870.1| - 0.0048 17.2 1.9 0.0091 16.2 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|433637110|ref|YP_007282870.1| - 0.0052 17.2 0.4 0.015 15.7 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|433637110|ref|YP_007282870.1| - 0.0071 16.5 1.7 0.011 15.9 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|433637110|ref|YP_007282870.1| - 0.012 15.2 8.2 0.14 11.7 0.2 3.4 2 1 1 3 3 3 0 AAA domain ATPase PF06745.13 gi|433637110|ref|YP_007282870.1| - 0.013 14.9 3.8 0.22 10.9 0.0 3.0 2 1 0 3 3 3 0 KaiC AAA_24 PF13479.6 gi|433637110|ref|YP_007282870.1| - 0.014 15.1 0.3 0.014 15.1 0.3 2.1 2 1 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|433637110|ref|YP_007282870.1| - 0.018 15.0 0.2 0.24 11.3 0.0 2.4 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|433637110|ref|YP_007282870.1| - 0.018 15.0 0.4 0.076 12.9 0.1 2.1 2 0 0 2 2 2 0 NACHT domain RNA_helicase PF00910.22 gi|433637110|ref|YP_007282870.1| - 0.02 15.3 0.0 0.05 14.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 gi|433637110|ref|YP_007282870.1| - 0.021 14.6 0.1 0.1 12.3 0.0 2.1 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|433637110|ref|YP_007282870.1| - 0.03 13.9 0.0 0.072 12.6 0.0 1.6 2 0 0 2 2 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|433637110|ref|YP_007282870.1| - 0.03 14.3 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SHE3 PF17078.5 gi|433637110|ref|YP_007282870.1| - 0.036 13.8 0.2 0.062 13.0 0.2 1.4 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 AAA_11 PF13086.6 gi|433637110|ref|YP_007282870.1| - 0.047 13.5 0.2 0.48 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|433637110|ref|YP_007282870.1| - 0.057 12.8 0.0 1.5 8.2 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein ATPase_2 PF01637.18 gi|433637110|ref|YP_007282870.1| - 0.057 13.3 0.0 0.84 9.5 0.0 2.2 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea Parvo_NS1 PF01057.17 gi|433637110|ref|YP_007282870.1| - 0.06 12.4 0.0 0.1 11.6 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 gi|433637110|ref|YP_007282870.1| - 0.061 13.2 0.0 0.11 12.3 0.0 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Hrs_helical PF12210.8 gi|433637110|ref|YP_007282870.1| - 0.065 13.8 1.5 5.5 7.6 0.0 2.5 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Zeta_toxin PF06414.12 gi|433637110|ref|YP_007282870.1| - 0.074 12.3 0.8 0.81 8.9 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin Taxilin PF09728.9 gi|433637110|ref|YP_007282870.1| - 0.089 12.0 1.5 0.16 11.1 1.5 1.3 1 0 0 1 1 1 0 Myosin-like coiled-coil protein DUF2959 PF11172.8 gi|433637110|ref|YP_007282870.1| - 0.092 12.9 0.9 0.21 11.7 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) PhoH PF02562.16 gi|433637110|ref|YP_007282870.1| - 0.11 11.9 0.9 0.24 10.8 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein ABC_tran PF00005.27 gi|433637110|ref|YP_007282870.1| - 0.17 12.4 0.6 0.64 10.5 0.0 2.1 3 1 0 3 3 1 0 ABC transporter Syntaxin-6_N PF09177.11 gi|433637110|ref|YP_007282870.1| - 0.19 12.3 1.9 0.42 11.2 0.5 2.3 3 0 0 3 3 1 0 Syntaxin 6, N-terminal Nsp1_C PF05064.13 gi|433637110|ref|YP_007282870.1| - 0.22 11.3 1.3 0.62 9.9 1.3 1.7 1 0 0 1 1 1 0 Nsp1-like C-terminal region Nup88 PF10168.9 gi|433637110|ref|YP_007282870.1| - 0.34 8.7 1.6 0.48 8.2 1.6 1.1 1 0 0 1 1 1 0 Nuclear pore component DUF3043 PF11241.8 gi|433637111|ref|YP_007282871.1| - 0.011 15.8 0.7 0.012 15.6 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF3963 PF13124.6 gi|433637111|ref|YP_007282871.1| - 0.18 11.8 0.4 0.18 11.8 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) DUF3005 PF11448.8 gi|433637111|ref|YP_007282871.1| - 0.25 11.4 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3005) PvlArgDC PF01862.16 gi|433637113|ref|YP_007282873.1| - 4.9e-33 114.2 0.0 6e-33 113.9 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) GTP_EFTU PF00009.27 gi|433637114|ref|YP_007282874.1| - 1.2e-30 106.6 0.0 3.8e-29 101.6 0.0 2.7 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|433637114|ref|YP_007282874.1| - 4.4e-24 84.2 1.0 8.7e-24 83.2 0.2 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|433637114|ref|YP_007282874.1| - 1e-20 73.8 1.5 2.6e-20 72.5 0.9 2.1 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|433637114|ref|YP_007282874.1| - 1.8e-12 47.5 11.1 3.3e-09 37.0 0.1 3.3 3 0 0 3 3 3 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|433637114|ref|YP_007282874.1| - 2.1e-08 34.2 0.0 6.2e-08 32.7 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 gi|433637114|ref|YP_007282874.1| - 0.001 19.2 0.1 0.19 11.8 0.0 2.6 2 0 0 2 2 2 1 Dynamin family ATP_bind_1 PF03029.17 gi|433637114|ref|YP_007282874.1| - 0.057 13.2 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Roc PF08477.13 gi|433637114|ref|YP_007282874.1| - 0.12 12.6 0.0 0.32 11.2 0.0 1.8 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase PRC PF05239.16 gi|433637115|ref|YP_007282875.1| - 2.6e-10 40.2 0.1 3.3e-10 39.9 0.1 1.2 1 0 0 1 1 1 1 PRC-barrel domain RalF_SCD PF18248.1 gi|433637115|ref|YP_007282875.1| - 0.03 14.3 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 RalF C-terminal Sec-7 capping domain PIN_6 PF17146.4 gi|433637116|ref|YP_007282876.1| - 1.1e-13 51.5 0.1 2e-13 50.6 0.1 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|433637116|ref|YP_007282876.1| - 1e-05 25.1 1.4 1.4e-05 24.6 0.8 1.5 1 1 1 2 2 2 1 PINc domain ribonuclease Zn-ribbon_8 PF09723.10 gi|433637116|ref|YP_007282876.1| - 0.00051 20.1 3.2 0.0012 18.9 3.2 1.6 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|433637116|ref|YP_007282876.1| - 0.00077 19.5 1.3 0.001 19.1 1.3 1.4 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_ligase_ZBD PF03119.16 gi|433637116|ref|YP_007282876.1| - 0.0037 17.2 1.5 0.047 13.7 0.2 2.4 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain Rad50_zn_hook PF04423.14 gi|433637116|ref|YP_007282876.1| - 0.0061 16.4 1.3 0.071 13.0 1.1 2.4 1 1 1 2 2 2 1 Rad50 zinc hook motif zinc-ribbons_6 PF07191.12 gi|433637116|ref|YP_007282876.1| - 0.0094 15.9 0.5 0.015 15.3 0.5 1.3 1 0 0 1 1 1 1 zinc-ribbons zf-C3HC4_3 PF13920.6 gi|433637116|ref|YP_007282876.1| - 0.015 15.1 1.4 0.022 14.6 1.4 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 gi|433637116|ref|YP_007282876.1| - 0.019 14.8 0.8 0.075 12.9 1.7 1.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 DZR PF12773.7 gi|433637116|ref|YP_007282876.1| - 0.026 14.6 0.7 0.042 13.9 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|433637116|ref|YP_007282876.1| - 0.027 15.2 0.1 0.038 14.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon family C1_2 PF03107.16 gi|433637116|ref|YP_007282876.1| - 0.036 14.4 0.2 0.07 13.5 0.2 1.5 1 0 0 1 1 1 0 C1 domain NOB1_Zn_bind PF08772.11 gi|433637116|ref|YP_007282876.1| - 0.038 14.1 0.9 0.076 13.2 0.6 1.6 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF4411 PF14367.6 gi|433637116|ref|YP_007282876.1| - 0.059 13.3 0.1 0.59 10.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4411) DUF3663 PF12404.8 gi|433637116|ref|YP_007282876.1| - 0.069 13.2 0.0 0.17 11.9 0.0 1.7 1 0 0 1 1 1 0 Peptidase zf-C2H2_4 PF13894.6 gi|433637116|ref|YP_007282876.1| - 0.29 12.1 2.8 6.4 7.9 0.3 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger ADK_lid PF05191.14 gi|433637116|ref|YP_007282876.1| - 0.33 11.0 2.7 0.64 10.1 2.7 1.5 1 0 0 1 1 1 0 Adenylate kinase, active site lid zf-C2H2 PF00096.26 gi|433637116|ref|YP_007282876.1| - 0.8 10.3 3.3 4.8 7.8 0.4 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 gi|433637116|ref|YP_007282876.1| - 0.8 9.7 9.9 0.3 11.0 1.7 2.3 1 1 1 2 2 2 0 zinc-finger of a C2HC-type CPBP PF02517.16 gi|433637117|ref|YP_007282877.1| - 1.2e-14 54.5 4.8 1.2e-14 54.5 4.8 3.2 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease PMP22_Claudin PF00822.20 gi|433637117|ref|YP_007282877.1| - 0.049 13.5 1.4 0.1 12.5 0.2 2.1 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family PGI PF00342.19 gi|433637118|ref|YP_007282878.1| - 1.8e-29 102.7 0.0 3.7e-25 88.5 0.0 2.1 2 0 0 2 2 2 2 Phosphoglucose isomerase SecD_SecF PF02355.16 gi|433637121|ref|YP_007282881.1| - 2.2e-28 98.9 12.3 2.2e-28 98.9 12.3 1.5 2 0 0 2 2 2 1 Protein export membrane protein Sec_GG PF07549.14 gi|433637121|ref|YP_007282881.1| - 0.00038 19.8 0.1 0.00092 18.6 0.1 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Patched PF02460.18 gi|433637121|ref|YP_007282881.1| - 1.9 6.5 13.4 2.8 5.9 13.4 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.16 gi|433637122|ref|YP_007282882.1| - 3.4e-13 49.4 7.5 6.4e-13 48.5 7.5 1.3 1 0 0 1 1 1 1 Protein export membrane protein TctB PF07331.11 gi|433637122|ref|YP_007282882.1| - 9.5 6.5 15.8 5.9 7.2 0.7 2.3 2 0 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family PseudoU_synth_1 PF01416.20 gi|433637124|ref|YP_007282884.1| - 3.9e-16 59.5 0.0 1.3e-11 44.9 0.0 2.5 2 0 0 2 2 2 2 tRNA pseudouridine synthase Sulfatase PF00884.23 gi|433637125|ref|YP_007282885.1| - 9.9e-43 146.7 0.0 1.3e-42 146.3 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|433637125|ref|YP_007282885.1| - 1.2e-12 48.2 0.4 3.8e-08 33.3 0.2 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 gi|433637125|ref|YP_007282885.1| - 0.0029 16.3 0.0 0.0077 14.9 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF229) DUF1501 PF07394.12 gi|433637125|ref|YP_007282885.1| - 0.022 13.8 0.0 0.067 12.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1501) PadR PF03551.14 gi|433637127|ref|YP_007282887.1| - 3.7e-12 46.0 0.2 4.4e-12 45.8 0.2 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|433637127|ref|YP_007282887.1| - 4.8e-05 23.3 0.0 5.5e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|433637127|ref|YP_007282887.1| - 0.0019 18.0 0.1 0.0024 17.7 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_27 PF13463.6 gi|433637127|ref|YP_007282887.1| - 0.034 14.7 0.0 0.043 14.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|433637127|ref|YP_007282887.1| - 0.066 13.3 0.1 1.5 9.0 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4364 PF14277.6 gi|433637127|ref|YP_007282887.1| - 0.1 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) FUR PF01475.19 gi|433637127|ref|YP_007282887.1| - 0.13 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family MarR_2 PF12802.7 gi|433637127|ref|YP_007282887.1| - 0.18 11.7 0.3 4 7.4 0.3 2.2 1 1 0 1 1 1 0 MarR family Hydantoinase_B PF02538.14 gi|433637128|ref|YP_007282888.1| - 1.9e-207 689.8 5.5 2.3e-207 689.5 5.5 1.1 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|433637129|ref|YP_007282889.1| - 2.7e-99 332.1 10.0 1.5e-95 319.8 5.4 3.2 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|433637129|ref|YP_007282889.1| - 3e-54 183.4 0.2 3e-54 183.4 0.2 2.9 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|433637129|ref|YP_007282889.1| - 0.00064 18.4 3.0 0.053 12.1 0.2 2.3 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|433637129|ref|YP_007282889.1| - 0.00072 19.1 1.4 0.15 11.5 0.1 2.4 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|433637129|ref|YP_007282889.1| - 0.14 12.6 2.5 4.2 7.8 0.1 2.7 2 0 0 2 2 2 0 Cell division protein FtsA Sulfatase PF00884.23 gi|433637130|ref|YP_007282890.1| - 7.2e-53 180.0 0.2 1.1e-52 179.4 0.2 1.3 1 0 0 1 1 1 1 Sulfatase DUF4976 PF16347.5 gi|433637130|ref|YP_007282890.1| - 6.2e-12 45.7 0.0 9.3e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 gi|433637130|ref|YP_007282890.1| - 7.6e-08 32.3 3.1 0.0007 19.3 0.1 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 gi|433637130|ref|YP_007282890.1| - 0.023 13.3 0.1 0.035 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF229) TAT_signal PF10518.9 gi|433637132|ref|YP_007282892.1| - 0.0028 17.5 0.3 0.0062 16.3 0.3 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence SPT_ssu-like PF11779.8 gi|433637133|ref|YP_007282893.1| - 0.046 13.3 0.3 0.08 12.6 0.3 1.4 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like FtsX PF02687.21 gi|433637133|ref|YP_007282893.1| - 0.072 13.6 2.4 0.11 12.9 2.4 1.5 1 1 0 1 1 1 0 FtsX-like permease family PMP1_2 PF08114.11 gi|433637133|ref|YP_007282893.1| - 1.2 8.9 4.3 2.9 7.7 0.5 2.1 2 0 0 2 2 2 0 ATPase proteolipid family tRNA-synt_His PF13393.6 gi|433637134|ref|YP_007282894.1| - 8e-47 160.0 0.2 1.4e-46 159.2 0.2 1.3 1 1 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|433637134|ref|YP_007282894.1| - 1.9e-12 47.1 0.1 5.5e-12 45.7 0.0 1.7 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|433637134|ref|YP_007282894.1| - 1.2e-07 31.8 0.0 2.1e-07 31.1 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) MarR_2 PF12802.7 gi|433637134|ref|YP_007282894.1| - 0.1 12.5 0.2 0.33 10.9 0.2 1.9 1 0 0 1 1 1 0 MarR family HisKA_4TM PF16926.5 gi|433637135|ref|YP_007282895.1| - 4.2e-16 59.0 2.2 7e-16 58.2 2.2 1.3 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HATPase_c PF02518.26 gi|433637135|ref|YP_007282895.1| - 4.4e-13 49.7 0.0 7.4e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|433637135|ref|YP_007282895.1| - 3e-10 40.0 0.2 9.2e-10 38.4 0.1 2.0 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain LapA_dom PF06305.11 gi|433637135|ref|YP_007282895.1| - 0.2 11.5 0.0 0.2 11.5 0.0 2.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Zn_Tnp_IS1595 PF12760.7 gi|433637136|ref|YP_007282896.1| - 9.2e-05 22.3 0.4 0.18 11.8 0.0 2.1 2 0 0 2 2 2 2 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|433637136|ref|YP_007282896.1| - 0.036 13.6 2.9 0.18 11.4 0.4 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-ISL3 PF14690.6 gi|433637136|ref|YP_007282896.1| - 0.18 12.5 2.2 13 6.6 0.4 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Rubredoxin PF00301.20 gi|433637136|ref|YP_007282896.1| - 0.22 11.6 4.5 1.7 8.7 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin zf-RRN7 PF11781.8 gi|433637136|ref|YP_007282896.1| - 0.56 9.9 7.4 0.74 9.6 1.0 2.3 2 1 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-TFIIB PF13453.6 gi|433637136|ref|YP_007282896.1| - 0.62 9.4 6.6 14 5.1 6.6 2.4 1 1 0 1 1 1 0 Transcription factor zinc-finger PAPS_reduct PF01507.19 gi|433637137|ref|YP_007282897.1| - 0.0037 17.3 0.0 0.0059 16.7 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|433637137|ref|YP_007282897.1| - 0.013 15.2 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase NAD_synthase PF02540.17 gi|433637137|ref|YP_007282897.1| - 0.069 12.3 0.0 0.097 11.8 0.0 1.2 1 0 0 1 1 1 0 NAD synthase tRNA_Me_trans PF03054.16 gi|433637137|ref|YP_007282897.1| - 0.17 10.7 0.0 0.45 9.2 0.0 1.7 1 1 0 1 1 1 0 tRNA methyl transferase dsDNA_bind PF01984.20 gi|433637138|ref|YP_007282898.1| - 2.1e-26 92.3 15.4 2.4e-26 92.2 15.4 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain cwf18 PF08315.12 gi|433637138|ref|YP_007282898.1| - 0.00022 21.9 11.7 0.00026 21.7 11.7 1.0 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor PCI PF01399.27 gi|433637138|ref|YP_007282898.1| - 0.0061 17.0 0.2 0.01 16.3 0.2 1.6 1 1 0 1 1 1 1 PCI domain Mod_r PF07200.13 gi|433637138|ref|YP_007282898.1| - 0.031 14.4 8.3 0.036 14.2 8.3 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein BAR_3 PF16746.5 gi|433637138|ref|YP_007282898.1| - 0.032 13.9 4.9 0.034 13.8 3.8 1.4 1 1 0 1 1 1 0 BAR domain of APPL family gp32 PF08804.10 gi|433637138|ref|YP_007282898.1| - 0.11 12.6 1.4 0.13 12.3 1.4 1.1 1 0 0 1 1 1 0 gp32 DNA binding protein like HrpJ PF07201.11 gi|433637138|ref|YP_007282898.1| - 0.28 11.5 13.2 0.37 11.1 13.2 1.1 1 0 0 1 1 1 0 HrpJ-like domain VAPB_antitox PF02697.14 gi|433637138|ref|YP_007282898.1| - 0.48 11.2 5.9 2.8 8.8 1.0 3.0 2 1 0 2 2 2 0 Putative antitoxin DUF4168 PF13767.6 gi|433637138|ref|YP_007282898.1| - 0.94 10.7 9.1 0.7 11.1 7.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4168) Arg_decarbox_C PF17944.1 gi|433637138|ref|YP_007282898.1| - 1.2 9.8 0.0 1.2 9.8 0.0 2.7 1 1 2 3 3 3 0 Arginine decarboxylase C-terminal helical extension Ribosomal_S19e PF01090.19 gi|433637139|ref|YP_007282899.1| - 6.7e-46 155.4 0.0 7.7e-46 155.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Rrf2 PF02082.20 gi|433637139|ref|YP_007282899.1| - 0.014 15.7 0.0 0.057 13.8 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator Mrr_N PF14338.6 gi|433637139|ref|YP_007282899.1| - 0.07 13.3 0.0 0.78 9.9 0.0 2.1 2 0 0 2 2 2 0 Mrr N-terminal domain TrmB PF01978.19 gi|433637139|ref|YP_007282899.1| - 0.12 12.3 0.0 0.31 11.0 0.0 1.7 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|433637139|ref|YP_007282899.1| - 0.18 11.8 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix AIRS PF00586.24 gi|433637140|ref|YP_007282900.1| - 1.5e-17 64.0 3.8 4.2e-17 62.6 3.8 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|433637140|ref|YP_007282900.1| - 1.5e-11 44.7 0.4 2.8e-11 43.8 0.4 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Microvir_J PF04726.13 gi|433637140|ref|YP_007282900.1| - 0.24 11.4 0.7 1 9.4 0.1 2.0 2 0 0 2 2 2 0 Microvirus J protein Peptidase_M50 PF02163.22 gi|433637141|ref|YP_007282901.1| - 3.5e-13 49.4 12.9 1.7e-06 27.5 0.8 2.3 1 1 1 2 2 2 2 Peptidase family M50 PNTB PF02233.16 gi|433637141|ref|YP_007282901.1| - 0.13 11.2 0.8 0.53 9.1 0.1 1.9 1 1 1 2 2 2 0 NAD(P) transhydrogenase beta subunit DUF2157 PF09925.9 gi|433637141|ref|YP_007282901.1| - 2.3 8.0 8.7 1.4 8.7 1.1 3.0 3 1 0 3 3 3 0 Predicted membrane protein (DUF2157) NosD PF05048.13 gi|433637143|ref|YP_007282903.1| - 3.8e-44 150.8 46.4 4.6e-18 65.4 4.8 3.3 1 1 2 3 3 3 3 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|433637143|ref|YP_007282903.1| - 4.9e-42 143.5 51.0 8.8e-17 61.4 7.8 4.1 1 1 2 3 3 3 3 Right handed beta helix region RTP1_C2 PF10304.9 gi|433637143|ref|YP_007282903.1| - 0.12 12.1 0.2 1.2 8.9 0.1 2.8 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 2 TAT_signal PF10518.9 gi|433637143|ref|YP_007282903.1| - 1.2 9.1 6.6 1.9 8.4 6.6 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence MoaE PF02391.17 gi|433637144|ref|YP_007282904.1| - 8.9e-25 87.2 0.1 1.5e-24 86.5 0.1 1.3 1 0 0 1 1 1 1 MoaE protein DUF3906 PF13046.6 gi|433637144|ref|YP_007282904.1| - 0.1 12.7 0.1 0.24 11.5 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3906) AMMECR1 PF01871.17 gi|433637145|ref|YP_007282905.1| - 7.1e-41 139.6 0.0 8.1e-41 139.4 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 QRPTase_C PF01729.19 gi|433637146|ref|YP_007282906.1| - 3.7e-18 65.9 0.0 5.3e-18 65.4 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|433637146|ref|YP_007282906.1| - 1.4e-05 25.0 0.0 8.1e-05 22.6 0.0 2.3 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain NAPRTase_N PF17767.1 gi|433637146|ref|YP_007282906.1| - 0.049 14.0 0.0 5.6 7.4 0.0 2.2 1 1 1 2 2 2 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DUF4702 PF15774.5 gi|433637146|ref|YP_007282906.1| - 0.2 10.6 0.0 0.29 10.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) Peptidase_M76 PF09768.9 gi|433637147|ref|YP_007282907.1| - 0.00016 21.5 0.1 0.00057 19.7 0.1 1.8 1 1 0 1 1 1 1 Peptidase M76 family PGF-CTERM PF18204.1 gi|433637147|ref|YP_007282907.1| - 0.0021 18.0 1.5 0.0046 16.9 1.5 1.6 1 0 0 1 1 1 1 PGF-CTERM motif SprT-like PF10263.9 gi|433637147|ref|YP_007282907.1| - 0.061 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 SprT-like family YXWGXW PF12779.7 gi|433637147|ref|YP_007282907.1| - 0.81 9.9 4.4 16 5.7 0.2 2.8 2 0 0 2 2 2 0 YXWGXW repeat (2 copies) Isochorismatase PF00857.20 gi|433637148|ref|YP_007282908.1| - 2.6e-48 164.5 0.0 2.9e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family Amidinotransf PF02274.17 gi|433637149|ref|YP_007282909.1| - 3.8e-16 59.1 0.0 4.9e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 Amidinotransferase 4HBT PF03061.22 gi|433637150|ref|YP_007282910.1| - 1.8e-13 50.6 0.2 2.7e-13 50.1 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|433637150|ref|YP_007282910.1| - 3.7e-06 27.1 0.1 8.4e-06 25.9 0.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) Peptidase_M23 PF01551.22 gi|433637151|ref|YP_007282911.1| - 0.023 14.9 0.0 0.054 13.7 0.0 1.6 1 0 0 1 1 1 0 Peptidase family M23 DraK_HK_N PF18092.1 gi|433637152|ref|YP_007282912.1| - 0.019 15.4 0.4 0.17 12.4 0.1 2.4 2 0 0 2 2 2 0 DraK Histidine Kinase N-terminal domain LTD PF00932.19 gi|433637153|ref|YP_007282913.1| - 0.00084 19.7 0.0 0.0022 18.3 0.0 1.7 1 0 0 1 1 1 1 Lamin Tail Domain FtsX PF02687.21 gi|433637153|ref|YP_007282913.1| - 0.01 16.3 0.9 0.01 16.3 0.9 3.6 2 1 0 2 2 2 0 FtsX-like permease family Cupredoxin_1 PF13473.6 gi|433637153|ref|YP_007282913.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Cupredoxin-like domain LysM PF01476.20 gi|433637155|ref|YP_007282915.1| - 4.3e-06 26.7 0.0 1.1e-05 25.4 0.0 1.8 1 0 0 1 1 1 1 LysM domain Phage_GPD PF05954.11 gi|433637156|ref|YP_007282916.1| - 8.9e-13 48.2 0.3 1.1e-12 47.9 0.3 1.2 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) Phage-tail_3 PF13550.6 gi|433637156|ref|YP_007282916.1| - 0.026 14.4 0.1 0.071 13.0 0.0 1.7 1 1 1 2 2 2 0 Putative phage tail protein DUF3540 PF12059.8 gi|433637157|ref|YP_007282917.1| - 0.0016 18.3 0.5 3.8 7.3 0.1 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF3540) Nairovirus_M PF07948.11 gi|433637157|ref|YP_007282917.1| - 0.0054 15.0 0.0 0.0065 14.8 0.0 1.1 1 0 0 1 1 1 1 Nairovirus M polyprotein-like Phage_base_V PF04717.12 gi|433637157|ref|YP_007282917.1| - 0.007 16.3 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 Type VI secretion system, phage-baseplate injector DUF2345 PF10106.9 gi|433637157|ref|YP_007282917.1| - 0.016 15.1 3.5 1.4 8.8 0.1 2.6 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2345) Tail_tube PF10618.9 gi|433637157|ref|YP_007282917.1| - 0.047 13.6 0.4 11 5.9 0.0 2.4 2 0 0 2 2 2 0 Phage tail tube protein Sarcoglycan_1 PF04790.13 gi|433637157|ref|YP_007282917.1| - 0.064 12.6 3.0 0.21 10.9 2.9 1.8 1 1 0 1 1 1 0 Sarcoglycan complex subunit protein DUF1439 PF07273.12 gi|433637157|ref|YP_007282917.1| - 0.088 12.6 0.4 1.2 9.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1439) PAAR_motif PF05488.13 gi|433637158|ref|YP_007282918.1| - 6.6e-22 77.5 9.0 3.4e-11 43.2 1.7 2.8 1 1 2 3 3 3 3 PAAR motif GPW_gp25 PF04965.14 gi|433637159|ref|YP_007282919.1| - 6.2e-25 86.8 0.1 7.2e-25 86.6 0.1 1.0 1 0 0 1 1 1 1 Gene 25-like lysozyme DUF2634 PF10934.8 gi|433637159|ref|YP_007282919.1| - 0.007 16.5 0.0 0.0092 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2634) Baseplate_J PF04865.14 gi|433637160|ref|YP_007282920.1| - 1.3e-15 57.3 2.7 1.7e-12 47.0 1.3 2.3 2 0 0 2 2 2 2 Baseplate J-like protein Baseplate_J PF04865.14 gi|433637161|ref|YP_007282921.1| - 2.6e-12 46.4 2.3 3.1e-10 39.6 0.7 2.3 2 0 0 2 2 2 2 Baseplate J-like protein Tail_P2_I PF09684.10 gi|433637162|ref|YP_007282922.1| - 2.1e-11 43.9 0.1 4.8e-11 42.7 0.1 1.6 1 0 0 1 1 1 1 Phage tail protein (Tail_P2_I) PQQ_3 PF13570.6 gi|433637162|ref|YP_007282922.1| - 0.00093 19.6 14.3 0.76 10.4 0.2 5.9 6 0 0 6 6 6 2 PQQ-like domain Tachylectin PF14517.6 gi|433637162|ref|YP_007282922.1| - 0.00094 18.8 0.0 0.01 15.4 0.0 2.2 2 0 0 2 2 2 1 Tachylectin NHL PF01436.21 gi|433637162|ref|YP_007282922.1| - 0.022 14.8 5.1 16 5.8 0.1 4.5 4 0 0 4 4 4 0 NHL repeat HHH_5 PF14520.6 gi|433637162|ref|YP_007282922.1| - 0.17 12.5 0.0 0.35 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain Baculo_LEF-10 PF07206.11 gi|433637163|ref|YP_007282923.1| - 0.05 13.8 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) EutN_CcmL PF03319.13 gi|433637163|ref|YP_007282923.1| - 0.056 14.0 0.2 0.14 12.8 0.1 1.7 1 1 1 2 2 2 0 Ethanolamine utilisation protein EutN/carboxysome DUF4822 PF16103.5 gi|433637163|ref|YP_007282923.1| - 0.13 12.5 0.1 0.25 11.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4822) HalX PF08663.10 gi|433637164|ref|YP_007282924.1| - 1.1e-19 70.5 3.3 2.6e-19 69.3 3.3 1.7 1 0 0 1 1 1 1 HalX domain Response_reg PF00072.24 gi|433637164|ref|YP_007282924.1| - 8e-18 64.6 0.2 1.5e-17 63.8 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_4 PF08448.10 gi|433637165|ref|YP_007282925.1| - 2.4e-36 124.3 15.1 4.3e-13 49.5 0.1 5.0 6 0 0 6 6 6 4 PAS fold PAS PF00989.25 gi|433637165|ref|YP_007282925.1| - 5.2e-22 78.0 0.9 2.9e-05 24.0 0.0 4.6 4 0 0 4 4 4 4 PAS fold PAS_9 PF13426.7 gi|433637165|ref|YP_007282925.1| - 2.8e-18 66.1 0.1 0.00058 20.1 0.0 4.6 4 0 0 4 4 4 4 PAS domain PAS_3 PF08447.12 gi|433637165|ref|YP_007282925.1| - 5.1e-17 61.9 0.6 9.6e-15 54.7 0.0 3.8 4 0 0 4 4 4 1 PAS fold HATPase_c PF02518.26 gi|433637165|ref|YP_007282925.1| - 1.8e-16 60.6 0.0 3.6e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|433637165|ref|YP_007282925.1| - 1.7e-12 47.0 0.5 2.9e-05 24.0 0.0 3.9 3 0 0 3 3 3 3 PAS domain HATPase_c_5 PF14501.6 gi|433637165|ref|YP_007282925.1| - 1e-05 25.4 0.0 2e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 gi|433637165|ref|YP_007282925.1| - 1.9e-05 24.3 0.2 3.9e-05 23.3 0.2 1.5 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HATPase_c_2 PF13581.6 gi|433637165|ref|YP_007282925.1| - 4.2e-05 23.5 0.1 0.00013 22.0 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|433637165|ref|YP_007282925.1| - 0.012 15.4 0.1 0.026 14.3 0.1 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PQQ_2 PF13360.6 gi|433637166|ref|YP_007282926.1| - 2.6e-21 76.3 17.0 2.4e-13 50.2 5.2 4.1 1 1 3 4 4 4 4 PQQ-like domain PQQ_3 PF13570.6 gi|433637166|ref|YP_007282926.1| - 7.7e-12 45.3 23.2 2.4e-05 24.7 0.7 7.7 7 1 1 8 8 8 4 PQQ-like domain PQQ PF01011.21 gi|433637166|ref|YP_007282926.1| - 6.9e-11 41.5 9.9 0.085 12.8 0.0 6.8 6 1 0 6 6 6 3 PQQ enzyme repeat WD40_like PF17005.5 gi|433637166|ref|YP_007282926.1| - 0.24 10.7 0.0 0.33 10.2 0.0 1.1 1 0 0 1 1 1 0 WD40-like domain Cpn60_TCP1 PF00118.24 gi|433637167|ref|YP_007282927.1| - 6.9e-172 572.5 16.9 7.8e-172 572.3 16.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family AAA_5 PF07728.14 gi|433637167|ref|YP_007282927.1| - 0.051 13.6 0.4 0.73 9.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF4157 PF13699.6 gi|433637167|ref|YP_007282927.1| - 0.42 10.9 3.1 6.1 7.2 0.4 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4157) DUF4795 PF16043.5 gi|433637167|ref|YP_007282927.1| - 0.49 10.0 2.5 0.84 9.2 2.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) KH_1 PF00013.29 gi|433637168|ref|YP_007282928.1| - 4.4e-14 52.0 0.3 4.6e-07 29.6 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|433637168|ref|YP_007282928.1| - 5.4e-05 22.9 1.9 0.011 15.6 0.1 2.6 2 1 1 3 3 3 2 KH domain KH_8 PF17903.1 gi|433637168|ref|YP_007282928.1| - 0.00092 19.3 0.0 0.0015 18.6 0.0 1.3 1 0 0 1 1 1 1 Krr1 KH1 domain KH_4 PF13083.6 gi|433637168|ref|YP_007282928.1| - 0.046 13.6 5.3 1.5 8.7 0.3 3.2 3 1 1 4 4 4 0 KH domain Malate_DH PF12434.8 gi|433637168|ref|YP_007282928.1| - 2 8.5 3.9 0.5 10.4 0.7 1.7 2 0 0 2 2 2 0 Malate dehydrogenase enzyme Defensin_big PF14862.6 gi|433637169|ref|YP_007282929.1| - 1.3 9.4 2.7 7.6 6.9 0.2 2.8 3 0 0 3 3 3 0 Big defensin tRNA-synt_1b PF00579.25 gi|433637170|ref|YP_007282930.1| - 5.4e-21 75.2 0.0 2.8e-20 72.8 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) SBP_bac_6 PF13343.6 gi|433637171|ref|YP_007282931.1| - 7.4e-25 87.8 0.0 1e-24 87.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|433637171|ref|YP_007282931.1| - 9.5e-18 65.0 1.0 1.2e-17 64.6 1.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|433637171|ref|YP_007282931.1| - 8.2e-10 39.1 1.8 1.1e-09 38.7 1.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|433637171|ref|YP_007282931.1| - 1.1e-05 25.3 0.2 1.7e-05 24.7 0.2 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|433637172|ref|YP_007282932.1| - 4.1e-26 91.8 36.3 1.1e-15 57.8 15.8 3.6 3 2 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|433637173|ref|YP_007282933.1| - 1.5e-33 116.2 0.0 2.3e-33 115.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637173|ref|YP_007282933.1| - 3e-09 37.1 0.1 6.9e-05 22.8 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|433637173|ref|YP_007282933.1| - 3.1e-05 24.3 0.1 0.00012 22.3 0.1 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433637173|ref|YP_007282933.1| - 0.00032 20.2 0.0 0.025 14.0 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|433637173|ref|YP_007282933.1| - 0.0007 20.0 0.1 0.061 13.8 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|433637173|ref|YP_007282933.1| - 0.00083 19.1 0.0 0.0017 18.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain TOBE_2 PF08402.10 gi|433637173|ref|YP_007282933.1| - 0.0011 19.1 2.9 0.0011 19.0 0.2 2.5 3 0 0 3 3 2 1 TOBE domain AAA_16 PF13191.6 gi|433637173|ref|YP_007282933.1| - 0.01 16.2 2.2 0.036 14.4 1.4 2.3 2 1 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.6 gi|433637173|ref|YP_007282933.1| - 0.015 14.9 0.3 0.067 12.8 0.3 2.1 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|433637173|ref|YP_007282933.1| - 0.019 14.9 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain TniB PF05621.11 gi|433637173|ref|YP_007282933.1| - 0.084 12.3 0.0 3.1 7.2 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein Zeta_toxin PF06414.12 gi|433637173|ref|YP_007282933.1| - 0.14 11.4 0.0 0.35 10.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 gi|433637173|ref|YP_007282933.1| - 0.16 12.0 0.0 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|433637173|ref|YP_007282933.1| - 0.16 12.2 0.5 0.35 11.1 0.1 1.8 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|433637173|ref|YP_007282933.1| - 0.18 11.4 0.0 1.3 8.6 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Mg_chelatase PF01078.21 gi|433637173|ref|YP_007282933.1| - 0.2 11.0 0.0 1 8.7 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|433637173|ref|YP_007282933.1| - 0.2 11.6 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 gi|433637173|ref|YP_007282933.1| - 0.28 11.6 0.1 0.52 10.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain RIO1 PF01163.22 gi|433637174|ref|YP_007282934.1| - 3.7e-61 206.0 0.1 7.8e-61 205.0 0.0 1.5 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 gi|433637174|ref|YP_007282934.1| - 4.3e-09 36.6 2.8 4.6e-05 23.5 0.0 2.8 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|433637174|ref|YP_007282934.1| - 4.5e-05 22.9 0.2 0.001 18.4 0.1 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|433637174|ref|YP_007282934.1| - 0.0001 21.8 0.0 0.00071 19.0 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_fungal PF17667.1 gi|433637174|ref|YP_007282934.1| - 0.00059 18.7 0.0 0.00093 18.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 gi|433637174|ref|YP_007282934.1| - 0.0031 17.1 0.1 0.42 10.1 0.0 2.4 3 0 0 3 3 3 1 PhoP regulatory network protein YrbL ABC1 PF03109.16 gi|433637174|ref|YP_007282934.1| - 0.12 12.6 0.0 1.9 8.7 0.0 2.4 2 0 0 2 2 2 0 ABC1 family VQ PF05678.14 gi|433637174|ref|YP_007282934.1| - 0.17 11.4 0.0 0.44 10.1 0.0 1.8 1 0 0 1 1 1 0 VQ motif tRNA_int_endo PF01974.17 gi|433637175|ref|YP_007282935.1| - 6.7e-31 106.2 0.4 1.5e-24 85.8 0.0 3.8 3 1 1 4 4 4 3 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|433637175|ref|YP_007282935.1| - 2.1e-23 81.8 0.0 2.7e-12 46.2 0.0 2.9 3 0 0 3 3 3 2 tRNA intron endonuclease, N-terminal domain Beta_helix PF13229.6 gi|433637176|ref|YP_007282936.1| - 6.2e-62 208.1 93.6 1.7e-18 67.0 15.8 5.5 2 1 4 6 6 6 6 Right handed beta helix region NosD PF05048.13 gi|433637176|ref|YP_007282936.1| - 5.9e-49 166.5 43.7 5.4e-18 65.1 16.3 5.2 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) CARDB PF07705.11 gi|433637176|ref|YP_007282936.1| - 3.1e-32 110.8 40.5 6.5e-06 26.3 0.9 11.1 10 0 0 10 10 10 8 CARDB CarboxypepD_reg PF13620.6 gi|433637176|ref|YP_007282936.1| - 9.7e-24 83.5 10.4 2.5e-13 50.1 2.1 8.1 8 0 0 8 8 7 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|433637176|ref|YP_007282936.1| - 3.1e-15 56.0 0.8 2.2e-06 27.6 0.1 4.1 3 0 0 3 3 3 2 CarboxypepD_reg-like domain SdrD_B PF17210.3 gi|433637176|ref|YP_007282936.1| - 3.3e-09 37.0 10.0 2.4e-05 24.5 0.2 4.4 3 0 0 3 3 3 2 SdrD B-like domain bMG3 PF11974.8 gi|433637176|ref|YP_007282936.1| - 5.4e-06 26.4 5.9 0.00021 21.3 0.1 4.4 4 0 0 4 4 4 1 Bacterial alpha-2-macroglobulin MG3 domain PKD PF00801.20 gi|433637176|ref|YP_007282936.1| - 6.5e-05 22.7 1.5 0.0013 18.5 0.2 4.3 2 0 0 2 2 2 1 PKD domain DUF1416 PF07210.12 gi|433637176|ref|YP_007282936.1| - 0.0007 19.4 0.1 0.0007 19.4 0.1 4.4 4 1 0 5 5 5 2 Protein of unknown function (DUF1416) TTR-52 PF01060.23 gi|433637176|ref|YP_007282936.1| - 0.0008 20.1 0.1 1.8 9.3 0.0 3.1 2 0 0 2 2 2 2 Transthyretin-like family Top6b_C PF18000.1 gi|433637176|ref|YP_007282936.1| - 0.0017 18.5 4.9 0.14 12.3 0.1 5.0 5 0 0 5 5 4 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain 4HBT PF03061.22 gi|433637176|ref|YP_007282936.1| - 0.0022 18.3 1.6 6.2 7.2 0.0 4.5 3 0 0 3 3 3 1 Thioesterase superfamily A2M PF00207.22 gi|433637176|ref|YP_007282936.1| - 0.031 14.1 0.1 0.82 9.6 0.0 3.3 3 0 0 3 3 3 0 Alpha-2-macroglobulin family MG4 PF17789.1 gi|433637176|ref|YP_007282936.1| - 0.52 10.5 7.6 5 7.3 0.0 5.2 5 0 0 5 5 4 0 Macroglobulin domain MG4 DUF11 PF01345.18 gi|433637176|ref|YP_007282936.1| - 3.4 8.0 25.3 2.7 8.4 0.1 7.5 7 2 0 7 7 6 0 Domain of unknown function DUF11 PQQ_3 PF13570.6 gi|433637177|ref|YP_007282937.1| - 9.8e-52 172.2 49.9 3.2e-12 46.5 1.2 8.6 8 0 0 8 8 8 7 PQQ-like domain PQQ_2 PF13360.6 gi|433637177|ref|YP_007282937.1| - 4.5e-41 141.0 21.8 2.8e-17 63.1 3.2 3.2 2 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|433637177|ref|YP_007282937.1| - 5.2e-33 111.4 25.4 1.9e-07 30.7 0.4 9.3 9 0 0 9 9 9 5 PQQ enzyme repeat FbpC_C_terminal PF17845.1 gi|433637177|ref|YP_007282937.1| - 0.011 15.8 8.4 2.3 8.4 0.1 4.4 4 0 0 4 4 4 0 FbpC C-terminal regulatory nucleotide binding domain DUF5050 PF16472.5 gi|433637177|ref|YP_007282937.1| - 0.039 13.2 0.0 4.4 6.5 0.0 2.9 1 1 1 3 3 3 0 Domain of unknown function (DUF5050) TPR_12 PF13424.6 gi|433637178|ref|YP_007282938.1| - 4.5e-95 312.0 54.5 9e-18 64.3 0.4 8.9 3 1 7 11 11 11 10 Tetratricopeptide repeat TPR_10 PF13374.6 gi|433637178|ref|YP_007282938.1| - 1.6e-40 135.9 41.8 9.2e-07 28.5 0.1 11.2 11 0 0 11 11 11 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|433637178|ref|YP_007282938.1| - 7e-40 131.9 40.4 8.4e-05 22.4 1.5 12.8 12 0 0 12 12 12 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|433637178|ref|YP_007282938.1| - 5.7e-39 130.4 26.8 1.6e-05 24.5 0.1 11.1 11 0 0 11 11 10 9 Tetratricopeptide repeat TPR_7 PF13176.6 gi|433637178|ref|YP_007282938.1| - 8.5e-39 128.8 36.6 3.1e-06 26.8 0.0 13.0 13 0 0 13 13 12 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|433637178|ref|YP_007282938.1| - 7.9e-31 103.7 17.0 0.004 17.2 0.0 11.3 11 0 0 11 11 11 7 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|433637178|ref|YP_007282938.1| - 2.9e-28 99.2 24.9 1.1e-12 48.0 0.8 4.1 1 1 3 4 4 4 4 MalT-like TPR region SNAP PF14938.6 gi|433637178|ref|YP_007282938.1| - 4.3e-15 55.9 6.6 0.00028 20.4 0.0 5.2 1 1 5 6 6 6 5 Soluble NSF attachment protein, SNAP TPR_16 PF13432.6 gi|433637178|ref|YP_007282938.1| - 6e-15 55.6 66.4 8.6e-05 23.1 6.4 11.1 7 3 5 12 12 10 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|433637178|ref|YP_007282938.1| - 3.5e-12 46.1 53.2 0.0029 18.3 2.1 14.4 10 3 4 14 14 12 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|433637178|ref|YP_007282938.1| - 1.4e-08 35.2 27.0 0.031 14.8 0.0 8.9 7 3 2 9 9 8 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|433637178|ref|YP_007282938.1| - 2.8e-07 30.5 0.4 8 7.1 0.0 7.3 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_9 PF13371.6 gi|433637178|ref|YP_007282938.1| - 2.9e-05 24.1 23.4 0.049 13.8 0.1 7.1 5 3 0 6 6 5 2 Tetratricopeptide repeat MarR_2 PF12802.7 gi|433637178|ref|YP_007282938.1| - 0.00011 22.0 1.3 0.00065 19.5 0.3 2.9 2 0 0 2 2 1 1 MarR family SHNi-TPR PF10516.9 gi|433637178|ref|YP_007282938.1| - 0.00013 21.4 9.9 0.18 11.3 0.1 6.0 7 0 0 7 7 6 1 SHNi-TPR HTH_IclR PF09339.10 gi|433637178|ref|YP_007282938.1| - 0.00014 21.6 0.1 0.0017 18.1 0.0 3.1 2 0 0 2 2 1 1 IclR helix-turn-helix domain AAA_16 PF13191.6 gi|433637178|ref|YP_007282938.1| - 0.00021 21.7 0.1 0.00021 21.7 0.1 3.3 3 1 0 3 3 1 1 AAA ATPase domain ANAPC3 PF12895.7 gi|433637178|ref|YP_007282938.1| - 0.00025 21.2 0.7 6.3 7.1 0.1 4.9 3 2 2 6 6 4 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|433637178|ref|YP_007282938.1| - 0.00054 20.4 19.3 93 4.0 0.0 11.4 12 0 0 12 12 11 0 Tetratricopeptide repeat RPN7 PF10602.9 gi|433637178|ref|YP_007282938.1| - 0.00066 19.4 1.0 1.5 8.5 0.0 4.1 4 1 0 5 5 5 1 26S proteasome subunit RPN7 TPR_21 PF09976.9 gi|433637178|ref|YP_007282938.1| - 0.00076 19.2 14.7 0.0027 17.4 0.2 4.3 3 2 1 4 4 4 1 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|433637178|ref|YP_007282938.1| - 0.0015 19.0 2.5 0.0015 19.0 2.5 14.9 16 0 0 16 16 12 1 Tetratricopeptide repeat AAA_18 PF13238.6 gi|433637178|ref|YP_007282938.1| - 0.0022 18.5 0.1 0.016 15.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|433637178|ref|YP_007282938.1| - 0.0036 17.8 0.0 0.0093 16.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|433637178|ref|YP_007282938.1| - 0.0038 17.5 0.0 0.014 15.6 0.0 2.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433637178|ref|YP_007282938.1| - 0.0053 16.5 0.8 0.021 14.5 0.0 2.5 3 0 0 3 3 1 1 AAA domain HTH_24 PF13412.6 gi|433637178|ref|YP_007282938.1| - 0.0078 15.7 0.0 0.06 12.9 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AAA_17 PF13207.6 gi|433637178|ref|YP_007282938.1| - 0.012 16.1 0.4 0.087 13.2 0.0 2.6 3 0 0 3 3 2 0 AAA domain ANAPC5 PF12862.7 gi|433637178|ref|YP_007282938.1| - 0.016 15.3 0.8 0.23 11.5 0.0 3.5 3 1 2 5 5 2 0 Anaphase-promoting complex subunit 5 NACHT PF05729.12 gi|433637178|ref|YP_007282938.1| - 0.018 15.0 0.0 0.31 11.0 0.0 2.4 1 1 0 2 2 2 0 NACHT domain AAA PF00004.29 gi|433637178|ref|YP_007282938.1| - 0.019 15.4 0.0 0.054 13.9 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|433637178|ref|YP_007282938.1| - 0.022 14.4 0.9 0.19 11.3 0.0 2.9 2 1 1 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|433637178|ref|YP_007282938.1| - 0.035 13.8 0.0 0.077 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|433637178|ref|YP_007282938.1| - 0.039 13.9 0.0 0.9 9.4 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MIT PF04212.18 gi|433637178|ref|YP_007282938.1| - 0.041 14.0 12.5 18 5.5 0.3 6.9 5 1 1 7 7 6 0 MIT (microtubule interacting and transport) domain AAA_19 PF13245.6 gi|433637178|ref|YP_007282938.1| - 0.042 14.2 0.1 0.81 10.0 0.0 3.0 3 1 0 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|433637178|ref|YP_007282938.1| - 0.047 13.8 0.1 0.28 11.3 0.1 2.4 1 1 0 1 1 1 0 AAA domain HTH_5 PF01022.20 gi|433637178|ref|YP_007282938.1| - 0.073 13.0 0.1 0.2 11.6 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family ATPase PF06745.13 gi|433637178|ref|YP_007282938.1| - 0.12 11.7 0.0 0.71 9.2 0.0 2.1 2 0 0 2 2 2 0 KaiC ATP_bind_1 PF03029.17 gi|433637178|ref|YP_007282938.1| - 0.15 11.8 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein TrmB PF01978.19 gi|433637178|ref|YP_007282938.1| - 0.16 11.9 0.4 4.5 7.2 0.0 3.0 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB AAA_7 PF12775.7 gi|433637178|ref|YP_007282938.1| - 0.18 11.3 0.0 2.9 7.4 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region TPR_11 PF13414.6 gi|433637178|ref|YP_007282938.1| - 3.5 7.4 21.5 2.8 7.7 0.1 7.3 8 0 0 8 8 8 0 TPR repeat UspA1_rep PF18792.1 gi|433637179|ref|YP_007282939.1| - 1.2e-11 44.0 93.2 0.11 13.0 1.7 13.0 13 0 0 13 13 13 12 Ubiquitous surface protein adhesin repeat CENP-F_leu_zip PF10473.9 gi|433637179|ref|YP_007282939.1| - 0.025 14.6 0.4 0.035 14.1 0.4 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SlyX PF04102.12 gi|433637179|ref|YP_007282939.1| - 0.083 13.5 3.5 0.16 12.6 3.5 1.4 1 0 0 1 1 1 0 SlyX CARDB PF07705.11 gi|433637180|ref|YP_007282940.1| - 6e-05 23.2 8.5 7.8e-05 22.9 5.7 2.5 2 1 0 2 2 2 1 CARDB CBM60 PF16841.5 gi|433637180|ref|YP_007282940.1| - 0.015 15.7 1.8 0.037 14.4 0.2 2.4 2 1 0 2 2 2 0 Ca-dependent carbohydrate-binding module xylan-binding zf-C4_Topoisom PF01396.19 gi|433637181|ref|YP_007282941.1| - 3.2e-07 30.0 1.3 0.00017 21.3 0.3 2.6 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger NucS PF01939.16 gi|433637181|ref|YP_007282941.1| - 6.3e-06 25.7 0.0 8.9e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Endonuclease NucS zinc-ribbons_6 PF07191.12 gi|433637181|ref|YP_007282941.1| - 0.011 15.7 4.3 1.9 8.5 0.1 2.5 1 1 0 2 2 2 0 zinc-ribbons zf-TFIIB PF13453.6 gi|433637181|ref|YP_007282941.1| - 0.14 11.6 6.5 2 7.8 0.9 2.8 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-LYAR PF08790.11 gi|433637181|ref|YP_007282941.1| - 0.26 11.2 2.9 18 5.3 0.0 3.4 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zinc_ribbon_4 PF13717.6 gi|433637181|ref|YP_007282941.1| - 0.36 10.8 5.2 1.1 9.3 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|433637181|ref|YP_007282941.1| - 0.42 10.4 6.3 9 6.1 0.4 2.9 2 0 0 2 2 2 0 InsA N-terminal domain Zn-ribbon_8 PF09723.10 gi|433637181|ref|YP_007282941.1| - 2.8 8.1 7.9 20 5.4 0.1 3.5 3 0 0 3 3 3 0 Zinc ribbon domain Auto_anti-p27 PF06677.12 gi|433637181|ref|YP_007282941.1| - 3 8.1 16.7 1.7 8.8 3.0 4.2 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PcrB PF01884.17 gi|433637182|ref|YP_007282942.1| - 6.3e-38 130.5 3.7 3.5e-37 128.0 3.7 1.8 1 1 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|433637182|ref|YP_007282942.1| - 0.00011 21.8 0.0 0.00019 20.9 0.0 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Trp_syntA PF00290.20 gi|433637182|ref|YP_007282942.1| - 0.0017 17.2 0.0 0.39 9.5 0.0 2.4 2 0 0 2 2 2 2 Tryptophan synthase alpha chain Csa1 PF06023.12 gi|433637182|ref|YP_007282942.1| - 0.016 14.5 0.2 0.023 14.1 0.2 1.2 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 IMPDH PF00478.25 gi|433637182|ref|YP_007282942.1| - 0.028 13.4 0.1 0.74 8.7 0.0 2.3 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|433637182|ref|YP_007282942.1| - 0.038 13.2 0.1 0.11 11.6 0.0 1.9 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase NAD_binding_7 PF13241.6 gi|433637182|ref|YP_007282942.1| - 0.043 14.3 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding DJ-1_PfpI PF01965.24 gi|433637183|ref|YP_007282943.1| - 6.7e-29 100.8 0.6 8.6e-29 100.5 0.6 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|433637183|ref|YP_007282943.1| - 0.036 13.7 0.0 0.2 11.2 0.0 1.9 1 1 1 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain HAD_2 PF13419.6 gi|433637184|ref|YP_007282944.1| - 9.5e-32 110.5 0.0 1.1e-31 110.3 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433637184|ref|YP_007282944.1| - 6e-17 62.6 0.8 6.3e-16 59.3 0.8 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433637184|ref|YP_007282944.1| - 2.9e-13 50.6 0.5 4.1e-13 50.2 0.5 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433637184|ref|YP_007282944.1| - 1.8e-08 34.3 1.5 5.6e-08 32.7 1.6 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|433637184|ref|YP_007282944.1| - 0.0095 16.0 0.1 0.18 11.9 0.1 2.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|433637184|ref|YP_007282944.1| - 0.21 10.9 0.0 0.43 10.0 0.0 1.5 1 1 0 1 1 1 0 Putative Phosphatase DEAD PF00270.29 gi|433637186|ref|YP_007282946.1| - 1.6e-24 86.6 0.0 3.1e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Sec63 PF02889.16 gi|433637186|ref|YP_007282946.1| - 1.8e-12 47.0 0.0 2.4e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain ResIII PF04851.15 gi|433637186|ref|YP_007282946.1| - 3.3e-11 43.5 0.0 5.3e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|433637186|ref|YP_007282946.1| - 3.6e-07 30.5 0.0 1.8e-06 28.3 0.0 2.1 1 1 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|433637186|ref|YP_007282946.1| - 0.0003 21.3 0.3 0.00089 19.8 0.3 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_6 PF14579.6 gi|433637186|ref|YP_007282946.1| - 0.018 15.3 4.2 0.73 10.1 0.1 3.3 4 0 0 4 4 4 0 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|433637186|ref|YP_007282946.1| - 0.12 12.2 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda RseC_MucC PF04246.12 gi|433637187|ref|YP_007282947.1| - 0.056 13.4 0.4 0.056 13.4 0.4 2.9 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC CRT-like PF08627.10 gi|433637187|ref|YP_007282947.1| - 0.081 11.9 0.1 0.11 11.4 0.1 1.2 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like Rnf-Nqr PF02508.14 gi|433637187|ref|YP_007282947.1| - 0.12 12.3 3.8 0.17 11.8 1.4 1.9 1 1 1 2 2 2 0 Rnf-Nqr subunit, membrane protein Peptidase_M48 PF01435.18 gi|433637188|ref|YP_007282948.1| - 2.7e-22 79.5 0.0 3.7e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 DUF4157 PF13699.6 gi|433637188|ref|YP_007282948.1| - 0.031 14.5 1.1 0.045 14.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4157) Peptidase_M56 PF05569.11 gi|433637188|ref|YP_007282948.1| - 0.039 13.1 0.0 0.075 12.2 0.0 1.4 1 0 0 1 1 1 0 BlaR1 peptidase M56 bPH_2 PF03703.14 gi|433637189|ref|YP_007282949.1| - 8.2e-18 64.4 0.1 1.2e-17 63.8 0.1 1.2 1 0 0 1 1 1 1 Bacterial PH domain PetG PF02529.15 gi|433637189|ref|YP_007282949.1| - 0.00014 21.7 2.2 0.00031 20.5 2.2 1.6 1 0 0 1 1 1 1 Cytochrome B6-F complex subunit 5 Polysacc_synt PF01943.17 gi|433637189|ref|YP_007282949.1| - 0.11 11.8 3.2 0.15 11.5 3.2 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF3040 PF11239.8 gi|433637189|ref|YP_007282949.1| - 3.3 8.0 6.8 8 6.8 6.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) MatE PF01554.18 gi|433637190|ref|YP_007282950.1| - 3.4e-50 169.8 30.9 7e-29 100.6 9.5 2.4 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|433637190|ref|YP_007282950.1| - 6.9e-10 39.1 30.2 8.5e-10 38.9 2.4 4.3 4 0 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433637190|ref|YP_007282950.1| - 1.1e-06 27.6 12.6 1.3e-06 27.3 7.2 2.5 2 1 0 2 2 2 2 Lipid II flippase MurJ NCE101 PF11654.8 gi|433637190|ref|YP_007282950.1| - 0.15 11.8 2.2 0.31 10.8 0.3 2.4 2 0 0 2 2 2 0 Non-classical export protein 1 Radical_SAM PF04055.21 gi|433637191|ref|YP_007282951.1| - 3.8e-13 50.1 0.2 1e-12 48.8 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily LIAS_N PF16881.5 gi|433637191|ref|YP_007282951.1| - 1e-09 38.8 0.0 2.1e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family B12-binding PF02310.19 gi|433637191|ref|YP_007282951.1| - 0.0041 17.2 0.1 1.1 9.4 0.0 3.1 2 2 1 3 3 3 2 B12 binding domain E1_dh PF00676.20 gi|433637192|ref|YP_007282952.1| - 7.4e-87 291.1 0.0 8.8e-87 290.8 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|433637192|ref|YP_007282952.1| - 3e-06 26.7 0.0 4.4e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_N PF00456.21 gi|433637192|ref|YP_007282952.1| - 0.0036 16.3 0.0 0.0056 15.7 0.0 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain HTH_41 PF14502.6 gi|433637192|ref|YP_007282952.1| - 0.017 14.8 0.5 0.05 13.3 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Transket_pyr PF02779.24 gi|433637193|ref|YP_007282953.1| - 6.9e-52 175.7 0.0 9.8e-52 175.2 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|433637193|ref|YP_007282953.1| - 1.7e-35 121.6 0.0 3.1e-35 120.7 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|433637193|ref|YP_007282953.1| - 0.042 14.1 0.0 0.076 13.3 0.0 1.5 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II 2-oxoacid_dh PF00198.23 gi|433637194|ref|YP_007282954.1| - 2.7e-90 301.9 0.0 3.4e-90 301.6 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3_binding PF02817.17 gi|433637194|ref|YP_007282954.1| - 3.1e-23 81.8 0.6 2.1e-15 56.8 0.2 3.6 4 0 0 4 4 4 2 e3 binding domain Biotin_lipoyl PF00364.22 gi|433637194|ref|YP_007282954.1| - 1.9e-22 78.9 0.2 3.7e-22 77.9 0.2 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|433637194|ref|YP_007282954.1| - 0.00037 20.2 0.5 0.26 11.1 0.0 2.9 2 1 1 3 3 3 2 Biotin-lipoyl like GCV_H PF01597.19 gi|433637194|ref|YP_007282954.1| - 0.00075 19.4 0.3 0.0019 18.1 0.1 1.8 2 0 0 2 2 2 1 Glycine cleavage H-protein RnfC_N PF13375.6 gi|433637194|ref|YP_007282954.1| - 0.011 15.6 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 gi|433637194|ref|YP_007282954.1| - 0.02 15.6 0.4 5 7.9 0.1 2.6 1 1 1 2 2 2 0 HlyD family secretion protein PALP PF00291.25 gi|433637195|ref|YP_007282955.1| - 2e-79 267.1 6.2 3.3e-79 266.4 6.2 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT PF01842.25 gi|433637195|ref|YP_007282955.1| - 7.5e-05 22.4 0.2 7.5e-05 22.4 0.2 2.1 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|433637195|ref|YP_007282955.1| - 0.022 15.3 0.1 0.13 12.8 0.0 2.4 2 0 0 2 2 2 0 ACT domain Toprim_3 PF13362.6 gi|433637195|ref|YP_007282955.1| - 1.1 9.7 4.9 11 6.5 0.7 3.2 3 0 0 3 3 3 0 Toprim domain LpxI_N PF17930.1 gi|433637195|ref|YP_007282955.1| - 1.2 9.1 4.1 15 5.5 0.1 3.4 3 2 1 4 4 4 0 LpxI N-terminal domain Pyr_redox_2 PF07992.14 gi|433637196|ref|YP_007282956.1| - 5e-68 229.5 2.7 5e-68 229.5 2.7 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|433637196|ref|YP_007282956.1| - 1.4e-35 121.9 0.1 3.8e-35 120.5 0.1 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|433637196|ref|YP_007282956.1| - 8.2e-23 80.8 1.7 9.3e-19 67.8 0.0 3.5 4 0 0 4 4 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433637196|ref|YP_007282956.1| - 7.8e-11 41.7 2.3 2.3e-08 33.5 1.7 2.4 2 1 0 2 2 2 2 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|433637196|ref|YP_007282956.1| - 8.6e-08 31.8 0.9 0.0012 18.2 0.2 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433637196|ref|YP_007282956.1| - 2.2e-07 30.3 9.8 2.9e-06 26.6 0.8 3.4 3 1 0 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 gi|433637196|ref|YP_007282956.1| - 4.1e-07 29.7 0.9 4.1e-07 29.7 0.9 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433637196|ref|YP_007282956.1| - 1.2e-06 28.6 3.1 0.0028 17.9 0.4 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|433637196|ref|YP_007282956.1| - 1.5e-06 27.6 3.4 0.0078 15.5 0.6 3.3 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 gi|433637196|ref|YP_007282956.1| - 2.5e-06 26.5 2.9 3.9e-05 22.5 0.2 2.4 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|433637196|ref|YP_007282956.1| - 4.4e-06 26.5 12.9 0.0062 16.2 1.7 4.1 3 1 1 4 4 4 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|433637196|ref|YP_007282956.1| - 7e-06 25.3 1.1 0.0012 18.0 0.1 2.4 2 0 0 2 2 2 2 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|433637196|ref|YP_007282956.1| - 8.1e-05 22.0 5.5 0.038 13.2 0.5 2.5 2 1 0 2 2 2 2 FAD binding domain Thi4 PF01946.17 gi|433637196|ref|YP_007282956.1| - 0.00012 21.4 3.7 0.0035 16.6 0.4 3.0 3 0 0 3 3 3 1 Thi4 family 3HCDH_N PF02737.18 gi|433637196|ref|YP_007282956.1| - 0.00025 21.0 0.6 0.0023 17.9 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|433637196|ref|YP_007282956.1| - 0.0013 19.2 1.0 0.29 11.6 0.0 2.9 3 1 0 3 3 2 1 XdhC Rossmann domain UDPG_MGDP_dh_N PF03721.14 gi|433637196|ref|YP_007282956.1| - 0.0024 17.5 2.4 0.0037 16.9 0.2 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|433637196|ref|YP_007282956.1| - 0.0039 17.6 0.1 0.83 10.1 0.1 2.5 2 0 0 2 2 2 1 Putative NAD(P)-binding Trp_halogenase PF04820.14 gi|433637196|ref|YP_007282956.1| - 0.0042 16.0 0.1 0.0042 16.0 0.1 1.7 2 0 0 2 2 2 1 Tryptophan halogenase 2-Hacid_dh_C PF02826.19 gi|433637196|ref|YP_007282956.1| - 0.041 13.3 0.0 1.1 8.5 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Trans_coact PF16805.5 gi|433637196|ref|YP_007282956.1| - 0.067 13.3 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Phage late-transcription coactivator TrkA_N PF02254.18 gi|433637196|ref|YP_007282956.1| - 0.07 13.4 0.2 3.6 7.9 0.0 2.7 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_9 PF13454.6 gi|433637196|ref|YP_007282956.1| - 5.1 7.1 5.7 1.4 8.9 0.1 2.8 4 0 0 4 4 3 0 FAD-NAD(P)-binding DUF5518 PF17647.1 gi|433637198|ref|YP_007282958.1| - 0.41 10.8 16.9 0.64 10.2 16.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5518) DUF2537 PF10801.8 gi|433637199|ref|YP_007282959.1| - 1.8 8.8 9.1 0.92 9.8 2.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2537) CPP1-like PF11833.8 gi|433637199|ref|YP_007282959.1| - 2.1 8.0 8.9 2.2 7.9 8.9 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like HTH_20 PF12840.7 gi|433637200|ref|YP_007282960.1| - 1.7e-13 50.4 0.8 2.3e-13 50.0 0.2 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 gi|433637200|ref|YP_007282960.1| - 0.00019 21.3 0.0 0.00037 20.3 0.0 1.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|433637200|ref|YP_007282960.1| - 0.00028 20.6 0.1 0.00049 19.9 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433637200|ref|YP_007282960.1| - 0.0024 17.7 0.1 0.0054 16.6 0.1 1.7 1 1 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|433637200|ref|YP_007282960.1| - 0.012 15.4 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family pXO2-72 PF17443.2 gi|433637200|ref|YP_007282960.1| - 0.045 14.0 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 FUR PF01475.19 gi|433637200|ref|YP_007282960.1| - 0.082 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_7 PF02796.15 gi|433637200|ref|YP_007282960.1| - 0.18 11.9 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Methyltransf_23 PF13489.6 gi|433637201|ref|YP_007282961.1| - 4.1e-28 98.3 0.0 5.4e-28 97.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433637201|ref|YP_007282961.1| - 1.8e-23 83.0 0.0 3.4e-23 82.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637201|ref|YP_007282961.1| - 1.4e-22 80.2 0.0 6.9e-22 78.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637201|ref|YP_007282961.1| - 2.6e-19 69.5 0.0 3.3e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637201|ref|YP_007282961.1| - 1.3e-16 61.1 0.0 4.3e-16 59.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637201|ref|YP_007282961.1| - 5.6e-14 52.0 0.0 7.6e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|433637201|ref|YP_007282961.1| - 3.2e-07 30.1 0.0 4.8e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW UPF0020 PF01170.18 gi|433637201|ref|YP_007282961.1| - 8.2e-05 22.4 0.2 0.023 14.4 0.0 2.4 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 Pox_MCEL PF03291.16 gi|433637201|ref|YP_007282961.1| - 0.00035 19.8 0.0 0.00045 19.4 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme CMAS PF02353.20 gi|433637201|ref|YP_007282961.1| - 0.0014 18.0 0.0 0.0016 17.8 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|433637201|ref|YP_007282961.1| - 0.0051 16.4 0.0 0.0084 15.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|433637201|ref|YP_007282961.1| - 0.0065 16.2 0.0 0.0093 15.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|433637201|ref|YP_007282961.1| - 0.012 15.3 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 gi|433637201|ref|YP_007282961.1| - 0.022 13.7 0.0 0.04 12.8 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_33 PF10017.9 gi|433637201|ref|YP_007282961.1| - 0.088 11.9 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent Gate PF07670.14 gi|433637202|ref|YP_007282962.1| - 5e-06 26.8 0.9 5e-06 26.8 0.9 3.9 3 2 1 4 4 4 2 Nucleoside recognition Roughex PF06020.11 gi|433637202|ref|YP_007282962.1| - 0.13 11.3 0.0 0.2 10.7 0.0 1.2 1 0 0 1 1 1 0 Drosophila roughex protein YdjM PF04307.14 gi|433637203|ref|YP_007282963.1| - 3.3e-13 49.3 7.4 4.1e-13 49.0 7.4 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase HTH_ParB PF17762.1 gi|433637204|ref|YP_007282964.1| - 0.028 14.2 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 HTH domain found in ParB protein tRNA-synt_1b PF00579.25 gi|433637205|ref|YP_007282965.1| - 3.9e-42 144.6 0.0 5.5e-25 88.3 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) DUF393 PF04134.12 gi|433637206|ref|YP_007282966.1| - 3.5e-34 118.5 0.0 4e-34 118.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF393 ITAM_Cys-rich PF10538.9 gi|433637206|ref|YP_007282966.1| - 0.11 12.2 0.2 0.24 11.2 0.2 1.5 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif Aldo_ket_red PF00248.21 gi|433637207|ref|YP_007282967.1| - 8.2e-50 169.7 0.0 7.1e-48 163.3 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Glyoxalase PF00903.25 gi|433637208|ref|YP_007282968.1| - 5.2e-09 36.4 0.2 7.5e-09 35.9 0.2 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|433637208|ref|YP_007282968.1| - 5.6e-06 26.6 0.3 8.3e-06 26.0 0.3 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433637208|ref|YP_007282968.1| - 0.0095 16.7 0.4 0.014 16.2 0.4 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain DNA_ligase_aden PF01653.18 gi|433637209|ref|YP_007282969.1| - 3.5e-103 345.0 0.0 7.8e-77 258.5 0.0 2.2 2 0 0 2 2 2 2 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 gi|433637209|ref|YP_007282969.1| - 2e-29 101.3 3.2 4.2e-29 100.3 3.2 1.6 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 gi|433637209|ref|YP_007282969.1| - 8.5e-19 67.4 1.1 7.5e-17 61.2 0.2 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|433637209|ref|YP_007282969.1| - 1.3e-16 60.9 0.2 5.3e-09 36.6 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain BRCT PF00533.26 gi|433637209|ref|YP_007282969.1| - 2.3e-10 40.7 0.0 4.1e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HHH PF00633.23 gi|433637209|ref|YP_007282969.1| - 7.5e-08 31.9 0.2 0.019 14.8 0.0 4.1 4 0 0 4 4 4 2 Helix-hairpin-helix motif DNA_ligase_ZBD PF03119.16 gi|433637209|ref|YP_007282969.1| - 0.00014 21.8 1.2 0.00036 20.5 1.2 1.8 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain HTH_10 PF04967.12 gi|433637210|ref|YP_007282970.1| - 9.9e-18 63.7 0.0 1.6e-17 63.1 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|433637210|ref|YP_007282970.1| - 0.00029 20.3 0.2 0.00098 18.6 0.1 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433637210|ref|YP_007282970.1| - 0.004 17.0 0.3 0.012 15.5 0.3 1.9 1 1 0 1 1 1 1 MarR family LacI PF00356.21 gi|433637210|ref|YP_007282970.1| - 0.0091 15.8 0.1 0.017 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_IclR PF09339.10 gi|433637210|ref|YP_007282970.1| - 0.018 14.8 0.1 0.048 13.5 0.1 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_23 PF13384.6 gi|433637210|ref|YP_007282970.1| - 0.11 12.4 0.4 0.52 10.2 0.1 2.2 2 0 0 2 2 2 0 Homeodomain-like domain MMPL PF03176.15 gi|433637211|ref|YP_007282971.1| - 4.3e-33 114.6 68.7 1.9e-18 66.5 17.1 3.9 3 1 1 4 4 4 2 MMPL family Sterol-sensing PF12349.8 gi|433637211|ref|YP_007282971.1| - 2.2e-08 34.1 16.1 5.5e-05 23.1 6.8 2.4 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 gi|433637211|ref|YP_007282971.1| - 1.4e-05 23.4 27.4 0.0026 15.9 8.2 2.1 2 0 0 2 2 2 2 Patched family SecD_SecF PF02355.16 gi|433637211|ref|YP_007282971.1| - 0.00042 19.7 35.3 0.0063 15.9 12.6 2.9 3 0 0 3 3 3 2 Protein export membrane protein ACR_tran PF00873.19 gi|433637211|ref|YP_007282971.1| - 8.1 3.9 38.4 0.34 8.5 13.3 2.1 2 0 0 2 2 2 0 AcrB/AcrD/AcrF family ABC2_membrane_2 PF12679.7 gi|433637212|ref|YP_007282972.1| - 1.6e-38 132.6 17.1 2e-38 132.3 17.1 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433637212|ref|YP_007282972.1| - 1.8e-08 33.9 19.7 1.8e-08 33.9 19.7 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433637212|ref|YP_007282972.1| - 2.9e-06 27.3 12.5 2.9e-06 27.3 12.5 2.2 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433637212|ref|YP_007282972.1| - 4.7e-05 23.1 12.2 4.7e-05 23.1 12.2 1.8 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|433637213|ref|YP_007282973.1| - 3.5e-29 102.1 0.0 2.1e-28 99.5 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|433637213|ref|YP_007282973.1| - 5.6e-11 42.8 0.3 9.2e-08 32.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|433637213|ref|YP_007282973.1| - 2.4e-06 28.1 0.0 4.7e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|433637213|ref|YP_007282973.1| - 0.0062 16.3 0.0 0.02 14.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|433637213|ref|YP_007282973.1| - 0.0099 15.4 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region SMC_N PF02463.19 gi|433637213|ref|YP_007282973.1| - 0.012 15.0 0.3 2.9 7.3 0.0 2.4 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|433637213|ref|YP_007282973.1| - 0.02 15.4 0.0 0.043 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain Lipoprotein_1 PF00820.19 gi|433637213|ref|YP_007282973.1| - 0.035 13.2 0.5 0.058 12.4 0.5 1.3 1 0 0 1 1 1 0 Borrelia lipoprotein AAA_29 PF13555.6 gi|433637213|ref|YP_007282973.1| - 0.04 13.7 0.0 0.099 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|433637213|ref|YP_007282973.1| - 0.052 13.5 0.1 0.096 12.6 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase Arabinose_bd PF12625.7 gi|433637213|ref|YP_007282973.1| - 0.055 13.6 0.8 0.13 12.3 0.4 1.8 2 0 0 2 2 2 0 Arabinose-binding domain of AraC transcription regulator, N-term AAA_10 PF12846.7 gi|433637213|ref|YP_007282973.1| - 0.088 11.7 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_15 PF13175.6 gi|433637213|ref|YP_007282973.1| - 0.16 11.6 0.0 8.9 5.9 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Phage_holin_3_6 PF07332.11 gi|433637215|ref|YP_007282975.1| - 0.033 14.2 4.6 0.054 13.5 4.6 1.4 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III UvrC_HhH_N PF08459.11 gi|433637216|ref|YP_007282976.1| - 3e-41 140.9 0.0 5.8e-41 140.0 0.0 1.5 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal HHH_5 PF14520.6 gi|433637216|ref|YP_007282976.1| - 3.3e-11 43.6 0.0 8.3e-11 42.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 gi|433637216|ref|YP_007282976.1| - 7.6e-11 41.3 0.2 4.3e-07 29.5 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|433637216|ref|YP_007282976.1| - 2.8e-09 37.0 0.0 5.8e-09 35.9 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif GIY-YIG PF01541.24 gi|433637216|ref|YP_007282976.1| - 3.6e-08 33.6 0.0 6.6e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|433637216|ref|YP_007282976.1| - 6.6e-08 32.1 0.9 2.8e-07 30.1 1.3 1.9 2 0 0 2 2 2 1 UvrB/uvrC motif 5_3_exonuc PF01367.20 gi|433637216|ref|YP_007282976.1| - 0.00059 20.4 0.0 0.21 12.2 0.0 3.0 2 1 1 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold IMS_HHH PF11798.8 gi|433637216|ref|YP_007282976.1| - 0.051 13.9 0.0 4 8.0 0.0 2.9 3 0 0 3 3 3 0 IMS family HHH motif FbpA PF05833.11 gi|433637216|ref|YP_007282976.1| - 0.059 12.1 0.0 0.094 11.5 0.0 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) HHH_3 PF12836.7 gi|433637216|ref|YP_007282976.1| - 0.06 13.6 0.0 2.3 8.5 0.0 2.5 2 0 0 2 2 2 0 Helix-hairpin-helix motif ABC2_membrane_2 PF12679.7 gi|433637217|ref|YP_007282977.1| - 4.3e-19 68.9 19.4 9.6e-19 67.7 19.4 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433637217|ref|YP_007282977.1| - 9.5e-06 25.0 8.2 1.2e-05 24.6 8.2 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|433637217|ref|YP_007282977.1| - 0.0005 19.6 9.7 0.0005 19.6 9.7 1.6 2 0 0 2 2 2 1 ABC-2 type transporter DUF2070 PF09843.9 gi|433637217|ref|YP_007282977.1| - 0.19 10.0 10.8 0.25 9.6 10.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ABC2_membrane_5 PF13346.6 gi|433637217|ref|YP_007282977.1| - 0.27 10.7 4.4 0.53 9.8 4.4 1.5 1 0 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|433637218|ref|YP_007282978.1| - 2.4e-24 86.4 0.0 4e-24 85.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637218|ref|YP_007282978.1| - 1.4e-12 48.0 0.0 6.2e-08 32.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|433637218|ref|YP_007282978.1| - 0.0019 17.9 0.0 0.004 16.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433637218|ref|YP_007282978.1| - 0.006 17.1 0.0 0.012 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433637218|ref|YP_007282978.1| - 0.021 14.3 0.0 3.7 6.9 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Thymidylate_kin PF02223.17 gi|433637218|ref|YP_007282978.1| - 0.035 13.8 0.0 7.3 6.2 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase IstB_IS21 PF01695.17 gi|433637218|ref|YP_007282978.1| - 0.065 13.0 0.0 1.6 8.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein SUI1 PF01253.22 gi|433637219|ref|YP_007282979.1| - 9.1e-17 61.4 0.0 1.3e-16 60.9 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|433637219|ref|YP_007282979.1| - 0.0077 16.5 0.0 0.012 15.8 0.0 1.5 1 1 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) ERCC4 PF02732.15 gi|433637219|ref|YP_007282979.1| - 0.14 12.3 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 ERCC4 domain Acetyltransf_10 PF13673.7 gi|433637220|ref|YP_007282980.1| - 5.8e-17 61.8 0.0 7.2e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433637220|ref|YP_007282980.1| - 2.1e-14 53.7 0.0 3.2e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433637220|ref|YP_007282980.1| - 2.9e-14 53.3 0.0 3.6e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|433637220|ref|YP_007282980.1| - 4.5e-08 33.9 0.1 5.3e-08 33.6 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433637220|ref|YP_007282980.1| - 1e-07 31.8 0.0 1.6e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|433637220|ref|YP_007282980.1| - 2.8e-06 27.6 0.0 3.6e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433637220|ref|YP_007282980.1| - 4.8e-06 26.7 0.3 0.094 12.8 0.0 2.1 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|433637220|ref|YP_007282980.1| - 0.0079 16.3 0.9 0.022 14.9 0.5 1.9 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_16 PF05301.11 gi|433637220|ref|YP_007282980.1| - 0.055 13.2 0.0 0.078 12.7 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Acetyltransf_13 PF13880.6 gi|433637220|ref|YP_007282980.1| - 0.06 13.3 0.0 0.097 12.7 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase PQQ_3 PF13570.6 gi|433637221|ref|YP_007282981.1| - 7.9e-42 140.7 29.5 3.8e-10 39.9 0.4 8.2 8 0 0 8 8 8 7 PQQ-like domain PQQ_2 PF13360.6 gi|433637221|ref|YP_007282981.1| - 3.7e-37 128.2 15.8 4.4e-17 62.5 3.2 3.3 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|433637221|ref|YP_007282981.1| - 8.2e-19 66.6 12.9 9.4e-05 22.2 0.1 6.7 8 0 0 8 8 8 3 PQQ enzyme repeat WD40_like PF17005.5 gi|433637221|ref|YP_007282981.1| - 0.16 11.3 0.0 65 2.7 0.2 3.5 3 1 0 3 3 3 0 WD40-like domain Cys_Met_Meta_PP PF01053.20 gi|433637222|ref|YP_007282982.1| - 9.4e-140 465.5 0.0 1.1e-139 465.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|433637222|ref|YP_007282982.1| - 1.3e-09 37.8 0.5 2.3e-08 33.8 0.1 2.6 1 1 1 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|433637222|ref|YP_007282982.1| - 2.2e-07 30.4 0.0 3.2e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433637222|ref|YP_007282982.1| - 5.2e-07 29.0 0.0 1.1e-06 27.9 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V Met_gamma_lyase PF06838.11 gi|433637222|ref|YP_007282982.1| - 1.8e-06 26.7 0.0 1e-05 24.3 0.0 1.9 1 1 0 1 1 1 1 Methionine gamma-lyase Beta_elim_lyase PF01212.21 gi|433637222|ref|YP_007282982.1| - 0.0084 15.4 0.0 0.033 13.5 0.0 1.8 2 0 0 2 2 2 1 Beta-eliminating lyase ArsP_2 PF11449.8 gi|433637223|ref|YP_007282983.1| - 6.8e-135 449.9 15.2 7.7e-135 449.7 15.2 1.0 1 0 0 1 1 1 1 Putative, 10TM heavy-metal exporter UvrB_inter PF17757.1 gi|433637225|ref|YP_007282985.1| - 6.2e-30 103.2 0.0 2e-29 101.6 0.0 1.9 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|433637225|ref|YP_007282985.1| - 1.4e-19 69.7 0.2 2.7e-19 68.7 0.2 1.5 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|433637225|ref|YP_007282985.1| - 4.1e-17 62.5 0.1 9.1e-17 61.4 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UVR PF02151.19 gi|433637225|ref|YP_007282985.1| - 1.5e-09 37.3 6.0 1.1e-08 34.6 6.0 2.6 1 0 0 1 1 1 1 UvrB/uvrC motif ResIII PF04851.15 gi|433637225|ref|YP_007282985.1| - 3.1e-09 37.1 0.0 7.4e-08 32.6 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|433637225|ref|YP_007282985.1| - 0.00059 19.7 0.0 0.0072 16.1 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|433637225|ref|YP_007282985.1| - 0.0028 17.4 0.0 0.04 13.6 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|433637225|ref|YP_007282985.1| - 0.01 16.1 0.1 6.6 7.1 0.0 2.9 3 0 0 3 3 3 0 AAA domain AAA_22 PF13401.6 gi|433637225|ref|YP_007282985.1| - 0.016 15.4 0.2 1.4 9.2 0.0 2.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|433637225|ref|YP_007282985.1| - 0.2 11.7 1.1 0.61 10.1 0.1 2.3 3 0 0 3 3 3 0 Helicase HerA, central domain DUF3584 PF12128.8 gi|433637226|ref|YP_007282986.1| - 0.0077 13.8 2.9 0.0091 13.6 2.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) FUSC PF04632.12 gi|433637226|ref|YP_007282986.1| - 0.043 12.4 3.1 0.048 12.2 3.1 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF148 PF02520.17 gi|433637226|ref|YP_007282986.1| - 0.046 13.8 0.2 7.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF148 Cytochrom_B562 PF07361.11 gi|433637226|ref|YP_007282986.1| - 0.062 14.0 1.2 0.08 13.6 1.2 1.1 1 0 0 1 1 1 0 Cytochrome b562 Apolipoprotein PF01442.18 gi|433637226|ref|YP_007282986.1| - 0.063 13.2 7.5 0.11 12.3 7.5 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain RGCC PF15151.6 gi|433637226|ref|YP_007282986.1| - 0.075 13.3 0.4 0.097 12.9 0.4 1.1 1 0 0 1 1 1 0 Response gene to complement 32 protein family HBM PF16591.5 gi|433637226|ref|YP_007282986.1| - 0.1 12.0 5.5 0.045 13.2 2.1 1.8 1 1 1 2 2 2 0 Helical bimodular sensor domain Spc7 PF08317.11 gi|433637226|ref|YP_007282986.1| - 0.11 11.4 1.6 0.11 11.3 1.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Metal_resist PF13801.6 gi|433637226|ref|YP_007282986.1| - 0.43 10.8 8.6 0.7 10.1 8.6 1.3 1 0 0 1 1 1 0 Heavy-metal resistance Sensor PF13796.6 gi|433637227|ref|YP_007282987.1| - 2.1e-39 135.2 25.3 1.2e-38 132.7 21.8 1.3 1 1 1 2 2 2 2 Putative sensor Abhydrolase_9_N PF15420.6 gi|433637227|ref|YP_007282987.1| - 0.58 10.1 11.7 15 5.5 11.5 2.3 1 1 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus DUF948 PF06103.11 gi|433637227|ref|YP_007282987.1| - 2.7 8.3 7.9 10 6.5 1.3 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Bactofilin PF04519.13 gi|433637228|ref|YP_007282988.1| - 5.4e-16 58.7 18.0 1.9e-10 40.9 4.4 2.2 1 1 1 2 2 2 2 Polymer-forming cytoskeletal SH3_14 PF18343.1 gi|433637228|ref|YP_007282988.1| - 0.047 13.8 0.1 0.079 13.1 0.1 1.3 1 0 0 1 1 1 0 Dda helicase SH3 domain FapA PF03961.13 gi|433637228|ref|YP_007282988.1| - 0.11 11.1 9.1 0.16 10.5 9.1 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Phage_spike PF18715.1 gi|433637228|ref|YP_007282988.1| - 5.6 7.1 10.4 46 4.2 0.6 4.1 1 1 1 2 2 2 0 Phage spike trimer DUF4397 PF14344.6 gi|433637229|ref|YP_007282989.1| - 2.7e-40 137.9 6.6 3.7e-20 72.9 0.9 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4397) AlgF PF11182.8 gi|433637229|ref|YP_007282989.1| - 3.1e-05 23.8 0.3 0.072 12.9 0.1 2.2 1 1 0 2 2 2 2 Alginate O-acetyl transferase AlgF TAT_signal PF10518.9 gi|433637229|ref|YP_007282989.1| - 0.0016 18.2 0.5 0.0016 18.2 0.5 2.3 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence AAA_16 PF13191.6 gi|433637230|ref|YP_007282990.1| - 6.9e-14 52.6 1.0 1.4e-11 45.1 0.3 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|433637230|ref|YP_007282990.1| - 6.4e-11 42.7 0.0 1.5e-10 41.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433637230|ref|YP_007282990.1| - 1e-05 26.0 0.0 2.6e-05 24.6 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|433637230|ref|YP_007282990.1| - 4.5e-05 23.0 0.0 0.0012 18.4 0.0 2.4 3 0 0 3 3 2 1 P-loop containing dynein motor region AAA_33 PF13671.6 gi|433637230|ref|YP_007282990.1| - 0.0003 21.0 0.0 0.00071 19.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|433637230|ref|YP_007282990.1| - 0.0009 19.0 0.0 0.7 9.6 0.0 2.8 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_35 PF14516.6 gi|433637230|ref|YP_007282990.1| - 0.0012 17.8 0.0 0.023 13.6 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain Sigma54_activat PF00158.26 gi|433637230|ref|YP_007282990.1| - 0.0013 18.5 0.0 0.0023 17.7 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain T2SSE PF00437.20 gi|433637230|ref|YP_007282990.1| - 0.0016 17.6 0.0 0.0027 16.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_11 PF13086.6 gi|433637230|ref|YP_007282990.1| - 0.0022 17.9 0.0 0.0035 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain TIP49_C PF17856.1 gi|433637230|ref|YP_007282990.1| - 0.0025 17.9 0.0 0.0064 16.6 0.0 1.7 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_30 PF13604.6 gi|433637230|ref|YP_007282990.1| - 0.0029 17.3 0.1 0.013 15.3 0.0 2.0 3 0 0 3 3 3 1 AAA domain AAA_18 PF13238.6 gi|433637230|ref|YP_007282990.1| - 0.0042 17.6 0.0 0.0087 16.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|433637230|ref|YP_007282990.1| - 0.0051 16.0 0.0 0.022 13.9 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Cdc6_C PF09079.11 gi|433637230|ref|YP_007282990.1| - 0.0063 16.5 0.2 0.032 14.2 0.0 2.3 3 0 0 3 3 1 1 CDC6, C terminal winged helix domain AAA_32 PF13654.6 gi|433637230|ref|YP_007282990.1| - 0.0067 15.3 0.0 0.8 8.4 0.0 2.9 3 0 0 3 3 3 1 AAA domain NACHT PF05729.12 gi|433637230|ref|YP_007282990.1| - 0.0078 16.1 0.0 0.018 15.0 0.0 1.6 1 1 0 1 1 1 1 NACHT domain Viral_helicase1 PF01443.18 gi|433637230|ref|YP_007282990.1| - 0.0089 15.8 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Rad17 PF03215.15 gi|433637230|ref|YP_007282990.1| - 0.012 15.5 0.0 0.031 14.2 0.0 1.9 2 1 0 2 2 1 0 Rad17 P-loop domain Mg_chelatase PF01078.21 gi|433637230|ref|YP_007282990.1| - 0.016 14.6 0.0 0.094 12.1 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 gi|433637230|ref|YP_007282990.1| - 0.018 15.4 0.0 0.034 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|433637230|ref|YP_007282990.1| - 0.018 15.0 0.0 0.035 14.0 0.0 1.5 1 0 0 1 1 1 0 NTPase Zeta_toxin PF06414.12 gi|433637230|ref|YP_007282990.1| - 0.024 13.9 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 gi|433637230|ref|YP_007282990.1| - 0.031 14.3 0.1 0.31 11.1 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|433637230|ref|YP_007282990.1| - 0.031 14.3 0.0 0.07 13.1 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|433637230|ref|YP_007282990.1| - 0.035 14.0 0.0 0.21 11.5 0.0 2.0 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea RuvB_N PF05496.12 gi|433637230|ref|YP_007282990.1| - 0.036 13.8 0.0 0.1 12.3 0.0 1.7 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain ATP_bind_1 PF03029.17 gi|433637230|ref|YP_007282990.1| - 0.044 13.6 0.0 0.13 12.1 0.0 1.8 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 gi|433637230|ref|YP_007282990.1| - 0.066 13.6 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 gi|433637230|ref|YP_007282990.1| - 0.092 13.0 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|433637230|ref|YP_007282990.1| - 0.094 12.1 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein DUF2075 PF09848.9 gi|433637230|ref|YP_007282990.1| - 0.098 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|433637230|ref|YP_007282990.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_6 PF12774.7 gi|433637230|ref|YP_007282990.1| - 0.22 10.5 0.0 0.38 9.7 0.0 1.3 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region HATPase_c PF02518.26 gi|433637231|ref|YP_007282991.1| - 9.5e-17 61.5 0.0 1.5e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA_4TM PF16926.5 gi|433637231|ref|YP_007282991.1| - 1.7e-10 40.7 1.5 2.9e-10 39.9 1.5 1.5 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HATPase_c_2 PF13581.6 gi|433637231|ref|YP_007282991.1| - 3e-07 30.4 0.1 7.8e-07 29.1 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|433637231|ref|YP_007282991.1| - 7.5e-06 25.8 0.0 1.5e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HisKA PF00512.25 gi|433637231|ref|YP_007282991.1| - 0.017 15.2 0.2 0.044 13.8 0.1 1.8 1 1 0 1 1 1 0 His Kinase A (phospho-acceptor) domain CopD PF05425.13 gi|433637231|ref|YP_007282991.1| - 0.05 14.0 1.2 0.05 14.0 1.2 2.0 2 0 0 2 2 2 0 Copper resistance protein D Cytochrom_B_C PF00032.17 gi|433637231|ref|YP_007282991.1| - 0.13 12.6 0.7 0.23 11.8 0.7 1.4 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD PIN PF01850.21 gi|433637233|ref|YP_007282993.1| - 1.4e-18 67.6 1.9 1.5e-18 67.4 1.9 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|433637233|ref|YP_007282993.1| - 0.00011 23.0 1.2 0.00014 22.6 1.2 1.2 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|433637233|ref|YP_007282993.1| - 0.00092 19.5 0.4 0.0012 19.1 0.4 1.1 1 0 0 1 1 1 1 PIN domain DUF2867 PF11066.8 gi|433637233|ref|YP_007282993.1| - 0.0028 18.0 0.1 0.0031 17.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2867) HHH_5 PF14520.6 gi|433637234|ref|YP_007282994.1| - 1.6e-06 28.6 3.6 3.7e-06 27.5 0.6 2.9 2 0 0 2 2 2 1 Helix-hairpin-helix domain MutS_V PF00488.21 gi|433637234|ref|YP_007282994.1| - 1.6e-06 28.3 0.0 2.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 MutS domain V HHH PF00633.23 gi|433637234|ref|YP_007282994.1| - 3.6e-05 23.4 2.5 0.014 15.2 0.3 3.1 2 0 0 2 2 2 2 Helix-hairpin-helix motif Transposase_20 PF02371.16 gi|433637234|ref|YP_007282994.1| - 0.028 14.7 0.1 0.067 13.5 0.1 1.6 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family DUF234 PF03008.14 gi|433637236|ref|YP_007282996.1| - 2.1e-25 89.1 0.0 4.3e-25 88.1 0.0 1.5 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function ATPase_2 PF01637.18 gi|433637236|ref|YP_007282996.1| - 3e-24 86.3 0.0 4.6e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|433637236|ref|YP_007282996.1| - 4.4e-09 36.5 0.0 1.2e-08 35.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433637236|ref|YP_007282996.1| - 2.4e-06 28.0 0.1 8e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|433637236|ref|YP_007282996.1| - 0.00029 21.1 0.0 0.0007 19.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain HTH_24 PF13412.6 gi|433637236|ref|YP_007282996.1| - 0.032 13.8 0.0 0.065 12.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433637236|ref|YP_007282996.1| - 0.062 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|433637236|ref|YP_007282996.1| - 0.062 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix AAA_24 PF13479.6 gi|433637236|ref|YP_007282996.1| - 0.14 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain DOPA_dioxygen PF08883.11 gi|433637236|ref|YP_007282996.1| - 0.17 12.0 0.0 0.37 11.0 0.0 1.5 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family Thiolase_N PF00108.23 gi|433637238|ref|YP_007282998.1| - 8.6e-24 84.3 0.1 2.3e-23 82.9 0.1 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|433637238|ref|YP_007282998.1| - 1.3e-09 37.7 0.0 3.8e-09 36.2 0.0 1.8 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|433637238|ref|YP_007282998.1| - 2.1e-07 30.8 1.0 5e-07 29.6 1.0 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|433637238|ref|YP_007282998.1| - 0.0039 17.0 1.8 0.079 12.8 0.1 2.7 3 0 0 3 3 3 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UPF0444 PF15475.6 gi|433637238|ref|YP_007282998.1| - 0.19 12.0 3.7 0.49 10.7 3.7 1.7 1 0 0 1 1 1 0 Transmembrane protein C12orf23, UPF0444 DUF35_N PF12172.8 gi|433637239|ref|YP_007282999.1| - 5.5e-08 32.5 5.1 1.1e-07 31.6 5.1 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|433637239|ref|YP_007282999.1| - 0.0021 18.0 0.7 0.016 15.2 0.7 2.5 1 1 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated ACP_syn_III_C PF08541.10 gi|433637239|ref|YP_007282999.1| - 0.0025 17.9 0.3 0.0063 16.7 0.3 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DUF374 PF04028.13 gi|433637239|ref|YP_007282999.1| - 0.0068 15.9 0.5 0.021 14.4 0.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF374) YAcAr PF10686.9 gi|433637239|ref|YP_007282999.1| - 0.45 10.5 7.2 1.7 8.6 2.4 2.6 2 0 0 2 2 2 0 YspA, cpYpsA-related SLOG family Rubredoxin_2 PF18073.1 gi|433637239|ref|YP_007282999.1| - 0.47 10.2 3.6 0.93 9.3 3.6 1.5 1 0 0 1 1 1 0 Rubredoxin metal binding domain Toprim_3 PF13362.6 gi|433637239|ref|YP_007282999.1| - 3.8 7.9 8.1 1.3 9.5 0.4 3.6 4 1 1 5 5 5 0 Toprim domain DUF4157 PF13699.6 gi|433637242|ref|YP_007283002.1| - 3.7e-24 84.8 0.8 1.1e-23 83.3 0.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) DUF1269 PF06897.12 gi|433637242|ref|YP_007283002.1| - 0.0047 17.2 1.2 0.045 14.0 1.1 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1269) Gly-zipper_Omp PF13488.6 gi|433637242|ref|YP_007283002.1| - 0.016 15.2 16.6 0.06 13.4 16.6 2.1 1 0 0 1 1 1 0 Glycine zipper TraT PF05818.12 gi|433637242|ref|YP_007283002.1| - 0.023 14.4 2.2 1.1 8.8 1.6 2.4 2 0 0 2 2 2 0 Enterobacterial TraT complement resistance protein Rick_17kDa_Anti PF05433.15 gi|433637242|ref|YP_007283002.1| - 0.15 11.9 15.0 0.43 10.5 15.0 1.8 1 0 0 1 1 1 0 Glycine zipper 2TM domain GST_C_5 PF16865.5 gi|433637242|ref|YP_007283002.1| - 0.18 12.4 0.1 1.5 9.5 0.1 2.2 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain Gly-zipper_YMGG PF13441.6 gi|433637242|ref|YP_007283002.1| - 2.4 8.0 19.7 0.96 9.2 16.5 2.1 2 0 0 2 2 2 0 YMGG-like Gly-zipper Abdominal-A PF12407.8 gi|433637243|ref|YP_007283003.1| - 0.52 9.9 4.0 0.5 10.0 1.5 2.1 2 0 0 2 2 2 0 Homeobox protein DUF4157 PF13699.6 gi|433637244|ref|YP_007283004.1| - 1.2e-30 105.6 0.8 3.7e-30 104.0 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) Peptidase_M91 PF14891.6 gi|433637244|ref|YP_007283004.1| - 0.024 14.9 0.2 0.052 13.9 0.2 1.5 1 0 0 1 1 1 0 Effector protein PhaC_N PF07167.13 gi|433637244|ref|YP_007283004.1| - 0.12 12.0 0.1 0.33 10.6 0.1 1.7 1 1 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AAA PF00004.29 gi|433637245|ref|YP_007283005.1| - 5.7e-26 91.5 0.0 1.3e-25 90.4 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|433637245|ref|YP_007283005.1| - 0.00057 19.7 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|433637245|ref|YP_007283005.1| - 0.0042 17.4 1.5 2.1 8.6 0.0 3.9 2 1 1 3 3 3 1 AAA domain SnoaL_2 PF12680.7 gi|433637245|ref|YP_007283005.1| - 0.0054 17.4 2.4 0.38 11.4 0.6 4.1 3 1 0 3 3 3 1 SnoaL-like domain Zot PF05707.12 gi|433637245|ref|YP_007283005.1| - 0.0079 15.9 0.1 0.11 12.1 0.1 2.2 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_2 PF07724.14 gi|433637245|ref|YP_007283005.1| - 0.013 15.6 0.0 0.071 13.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 gi|433637245|ref|YP_007283005.1| - 0.028 14.6 0.0 0.14 12.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain NTF2 PF02136.20 gi|433637245|ref|YP_007283005.1| - 0.03 14.9 0.0 0.073 13.6 0.0 1.6 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain Zeta_toxin PF06414.12 gi|433637245|ref|YP_007283005.1| - 0.041 13.2 0.0 2.9 7.1 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin Torsin PF06309.11 gi|433637245|ref|YP_007283005.1| - 0.076 13.1 0.0 0.49 10.5 0.0 2.1 2 0 0 2 2 2 0 Torsin AAA_25 PF13481.6 gi|433637245|ref|YP_007283005.1| - 0.1 12.1 0.1 0.45 10.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|433637245|ref|YP_007283005.1| - 0.14 12.6 3.8 0.38 11.1 0.1 3.4 4 1 0 4 4 4 0 AAA ATPase domain Glycos_transf_1 PF00534.20 gi|433637247|ref|YP_007283007.1| - 1.3e-10 41.1 0.0 2e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433637247|ref|YP_007283007.1| - 3.8e-08 33.9 0.6 8.4e-08 32.8 0.3 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|433637247|ref|YP_007283007.1| - 1.8e-07 31.7 0.2 3.8e-07 30.6 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|433637247|ref|YP_007283007.1| - 5.6e-06 26.5 0.0 7.6e-05 22.8 0.0 2.3 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|433637247|ref|YP_007283007.1| - 0.0019 18.6 0.0 0.0045 17.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|433637247|ref|YP_007283007.1| - 0.016 15.2 0.0 4.2 7.4 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase 4-like Polysacc_synt PF01943.17 gi|433637248|ref|YP_007283008.1| - 1.4e-29 103.3 8.3 1.4e-29 103.3 8.3 2.3 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|433637248|ref|YP_007283008.1| - 3.5e-28 98.7 5.3 3.5e-28 98.7 5.3 2.4 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433637248|ref|YP_007283008.1| - 2.5e-20 73.0 18.3 2.5e-20 73.0 18.3 3.5 5 0 0 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433637248|ref|YP_007283008.1| - 7.3e-09 34.7 17.0 7.3e-09 34.7 17.0 1.9 2 0 0 2 2 2 1 Lipid II flippase MurJ MatE PF01554.18 gi|433637248|ref|YP_007283008.1| - 4.1e-08 33.0 4.2 4.1e-08 33.0 4.2 3.7 3 1 1 4 4 4 2 MatE Phosphodiest PF01663.22 gi|433637249|ref|YP_007283009.1| - 2e-29 103.3 0.4 2.9e-29 102.8 0.4 1.4 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|433637249|ref|YP_007283009.1| - 5.8e-05 22.6 1.9 0.005 16.3 0.8 3.2 2 1 0 2 2 2 2 Sulfatase Metalloenzyme PF01676.18 gi|433637249|ref|YP_007283009.1| - 0.003 17.0 0.3 0.0099 15.3 0.0 2.0 2 0 0 2 2 2 1 Metalloenzyme superfamily YqhR PF11085.8 gi|433637250|ref|YP_007283010.1| - 0.014 15.4 0.8 0.014 15.4 0.8 2.3 2 1 0 2 2 2 0 Conserved membrane protein YqhR AA_permease_C PF13906.6 gi|433637251|ref|YP_007283011.1| - 0.34 11.0 4.2 9.7 6.4 0.1 2.5 2 1 0 2 2 2 0 C-terminus of AA_permease DUF1616 PF07760.11 gi|433637252|ref|YP_007283012.1| - 2.5e-112 375.0 0.2 2.9e-112 374.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF4870 PF09685.10 gi|433637252|ref|YP_007283012.1| - 0.024 14.8 2.5 0.077 13.1 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4870) DUF4131 PF13567.6 gi|433637252|ref|YP_007283012.1| - 0.25 11.0 8.8 5 6.7 0.1 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Abhydrolase_6 PF12697.7 gi|433637253|ref|YP_007283013.1| - 1.7e-16 61.5 18.0 2.3e-16 61.1 18.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|433637253|ref|YP_007283013.1| - 2.8e-11 43.2 0.1 1.1e-10 41.2 0.1 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|433637253|ref|YP_007283013.1| - 7.4e-11 42.2 0.1 2.1e-08 34.1 0.1 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 gi|433637253|ref|YP_007283013.1| - 0.00066 19.8 0.1 0.0013 18.8 0.1 1.4 1 0 0 1 1 1 1 TAP-like protein DLH PF01738.18 gi|433637253|ref|YP_007283013.1| - 0.0015 18.1 0.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|433637253|ref|YP_007283013.1| - 0.0029 17.1 0.0 0.0041 16.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 gi|433637253|ref|YP_007283013.1| - 0.012 15.3 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 gi|433637253|ref|YP_007283013.1| - 0.043 13.4 0.0 0.057 13.0 0.0 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Esterase_phd PF10503.9 gi|433637253|ref|YP_007283013.1| - 0.047 13.2 0.8 0.73 9.3 0.1 2.2 2 0 0 2 2 2 0 Esterase PHB depolymerase Abhydrolase_5 PF12695.7 gi|433637253|ref|YP_007283013.1| - 0.07 12.9 0.0 9.1 6.0 0.0 2.1 2 0 0 2 2 2 0 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|433637253|ref|YP_007283013.1| - 0.095 12.5 0.0 0.93 9.3 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DNA_primase_lrg PF04104.14 gi|433637254|ref|YP_007283014.1| - 2.1e-33 115.9 0.0 3.4e-33 115.2 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit TrmB PF01978.19 gi|433637255|ref|YP_007283015.1| - 0.00012 21.9 0.0 0.00035 20.4 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|433637255|ref|YP_007283015.1| - 0.00023 21.2 0.2 0.0012 18.8 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433637255|ref|YP_007283015.1| - 0.0012 18.7 1.6 1.2 9.0 0.1 2.7 3 0 0 3 3 3 2 MarR family HTH_24 PF13412.6 gi|433637255|ref|YP_007283015.1| - 0.0047 16.4 0.0 0.023 14.3 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|433637255|ref|YP_007283015.1| - 0.0079 16.1 0.3 2.2 8.2 0.0 2.7 3 0 0 3 3 3 1 MarR family HTH_5 PF01022.20 gi|433637255|ref|YP_007283015.1| - 0.0097 15.8 0.0 0.039 13.8 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|433637255|ref|YP_007283015.1| - 0.016 15.1 0.0 0.18 11.7 0.0 2.3 2 0 0 2 2 2 0 HTH domain Dimerisation2 PF16864.5 gi|433637255|ref|YP_007283015.1| - 0.042 13.8 0.0 0.094 12.7 0.0 1.5 1 1 0 1 1 1 0 Dimerisation domain DUF2848 PF11010.8 gi|433637255|ref|YP_007283015.1| - 0.046 13.3 0.0 0.08 12.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2848) LexA_DNA_bind PF01726.16 gi|433637255|ref|YP_007283015.1| - 0.079 12.7 0.0 0.24 11.2 0.0 1.8 2 0 0 2 2 2 0 LexA DNA binding domain Fe_dep_repress PF01325.19 gi|433637255|ref|YP_007283015.1| - 0.14 12.4 0.0 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_AsnC-type PF13404.6 gi|433637255|ref|YP_007283015.1| - 0.21 11.4 1.7 2.3 8.1 0.0 3.1 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 gi|433637258|ref|YP_007283018.1| - 2.3e-18 65.7 0.2 3.6e-18 65.1 0.2 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|433637258|ref|YP_007283018.1| - 0.0041 16.6 0.5 0.0041 16.6 0.5 2.4 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|433637258|ref|YP_007283018.1| - 0.025 14.2 0.0 0.05 13.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding LacI PF00356.21 gi|433637258|ref|YP_007283018.1| - 0.051 13.4 1.1 0.33 10.8 0.1 2.5 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family LexA_DNA_bind PF01726.16 gi|433637258|ref|YP_007283018.1| - 0.1 12.4 0.2 0.4 10.5 0.2 1.9 1 1 0 1 1 1 0 LexA DNA binding domain Sigma70_r3 PF04539.16 gi|433637258|ref|YP_007283018.1| - 0.14 12.3 3.2 7.1 6.8 0.1 2.7 3 0 0 3 3 3 0 Sigma-70 region 3 Sigma70_r4_2 PF08281.12 gi|433637258|ref|YP_007283018.1| - 0.23 11.2 3.1 2.1 8.1 1.1 2.8 2 1 0 2 2 2 0 Sigma-70, region 4 FAD_binding_3 PF01494.19 gi|433637259|ref|YP_007283019.1| - 6e-30 104.7 3.6 6.6e-29 101.3 3.6 2.1 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|433637259|ref|YP_007283019.1| - 6e-05 23.2 0.1 0.00017 21.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|433637259|ref|YP_007283019.1| - 6.8e-05 21.9 0.1 0.24 10.2 0.1 2.2 2 0 0 2 2 2 2 Tryptophan halogenase DAO PF01266.24 gi|433637259|ref|YP_007283019.1| - 0.00094 18.9 2.6 0.00094 18.9 2.6 2.5 1 1 1 3 3 3 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|433637259|ref|YP_007283019.1| - 0.001 18.3 0.3 0.002 17.4 0.3 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433637259|ref|YP_007283019.1| - 0.016 14.3 0.1 0.026 13.6 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain Thi4 PF01946.17 gi|433637259|ref|YP_007283019.1| - 0.083 12.1 0.1 0.18 11.0 0.0 1.5 2 0 0 2 2 2 0 Thi4 family Pyr_redox_3 PF13738.6 gi|433637259|ref|YP_007283019.1| - 0.094 12.0 0.3 0.13 11.5 0.3 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433637259|ref|YP_007283019.1| - 0.15 12.7 0.2 0.51 10.9 0.2 2.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433637259|ref|YP_007283019.1| - 0.22 10.6 1.0 0.32 10.0 1.0 1.4 1 1 0 1 1 1 0 Glucose inhibited division protein A HI0933_like PF03486.14 gi|433637259|ref|YP_007283019.1| - 0.3 9.7 0.0 0.46 9.1 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein Lycopene_cycl PF05834.12 gi|433637259|ref|YP_007283019.1| - 0.51 9.3 3.0 11 5.0 0.1 2.5 3 0 0 3 3 3 0 Lycopene cyclase protein TPR_4 PF07721.14 gi|433637259|ref|YP_007283019.1| - 4.3 8.2 7.8 0.47 11.2 1.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4382 PF14321.6 gi|433637260|ref|YP_007283020.1| - 7.6e-32 110.4 10.0 5.9e-31 107.6 10.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4382) Trs65 PF12735.7 gi|433637260|ref|YP_007283020.1| - 0.063 12.7 0.0 0.094 12.1 0.0 1.2 1 0 0 1 1 1 0 TRAPP trafficking subunit Trs65 TAT_signal PF10518.9 gi|433637260|ref|YP_007283020.1| - 0.81 9.6 4.8 1.4 8.9 4.8 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence BUD22 PF09073.10 gi|433637260|ref|YP_007283020.1| - 1.2 8.4 8.9 1.4 8.1 8.9 1.2 1 0 0 1 1 1 0 BUD22 Amidohydro_1 PF01979.20 gi|433637261|ref|YP_007283021.1| - 1.6e-65 221.7 3.0 1.8e-65 221.5 3.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|433637261|ref|YP_007283021.1| - 6.1e-20 72.1 15.6 4.4e-16 59.4 11.7 2.3 1 1 1 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|433637261|ref|YP_007283021.1| - 0.00032 20.1 0.0 0.00063 19.2 0.0 1.4 1 0 0 1 1 1 1 Adenosine/AMP deaminase TatD_DNase PF01026.21 gi|433637261|ref|YP_007283021.1| - 0.041 13.2 0.0 0.074 12.4 0.0 1.6 1 0 0 1 1 1 0 TatD related DNase DUF3244 PF11589.8 gi|433637262|ref|YP_007283022.1| - 0.12 12.5 1.1 1.7 8.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3244) MG4 PF17789.1 gi|433637262|ref|YP_007283022.1| - 0.68 10.1 2.7 2.7 8.2 2.7 1.9 1 1 0 1 1 1 0 Macroglobulin domain MG4 CarboxypepD_reg PF13620.6 gi|433637263|ref|YP_007283023.1| - 4.2e-46 155.1 90.1 7.2e-13 48.6 3.3 9.1 8 1 0 8 8 8 5 Carboxypeptidase regulatory-like domain Peptidase_S8 PF00082.22 gi|433637263|ref|YP_007283023.1| - 7.5e-39 133.7 13.4 7.5e-39 133.7 13.4 2.6 3 1 0 3 3 2 1 Subtilase family CarbopepD_reg_2 PF13715.6 gi|433637263|ref|YP_007283023.1| - 7.5e-23 80.3 38.7 3.4e-09 36.6 0.5 6.2 3 1 2 5 5 5 5 CarboxypepD_reg-like domain PEGA PF08308.11 gi|433637263|ref|YP_007283023.1| - 6.2e-09 35.6 2.1 1.2 9.1 0.0 6.9 6 0 0 6 6 6 2 PEGA domain CARDB PF07705.11 gi|433637263|ref|YP_007283023.1| - 1.3e-06 28.6 4.1 0.00055 20.2 3.0 6.8 7 2 4 11 11 10 2 CARDB bMG3 PF11974.8 gi|433637263|ref|YP_007283023.1| - 0.0017 18.4 16.0 0.19 11.7 2.2 5.3 5 0 0 5 5 5 2 Bacterial alpha-2-macroglobulin MG3 domain DUF4249 PF14054.6 gi|433637263|ref|YP_007283023.1| - 0.0027 17.4 43.5 0.0067 16.1 1.3 6.5 3 2 4 7 7 7 2 Domain of unknown function (DUF4249) NdhN PF11909.8 gi|433637263|ref|YP_007283023.1| - 0.0079 15.9 0.0 0.061 13.0 0.0 2.3 2 0 0 2 2 2 1 NADH-quinone oxidoreductase cyanobacterial subunit N SdrD_B PF17210.3 gi|433637263|ref|YP_007283023.1| - 0.028 14.6 50.7 0.053 13.7 1.9 6.4 2 1 3 5 5 5 0 SdrD B-like domain DUF1533 PF07550.11 gi|433637263|ref|YP_007283023.1| - 0.031 14.2 13.4 0.39 10.6 0.1 5.5 5 0 0 5 5 5 0 Protein of unknown function (DUF1533) PGF-CTERM PF18204.1 gi|433637263|ref|YP_007283023.1| - 0.33 11.0 5.8 0.95 9.5 5.8 1.9 1 0 0 1 1 1 0 PGF-CTERM motif AdoHcyase PF05221.17 gi|433637265|ref|YP_007283025.1| - 2.7e-51 174.5 0.0 1.3e-25 90.1 0.3 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|433637265|ref|YP_007283025.1| - 2.3e-46 157.8 1.9 4.2e-46 157.0 0.3 1.9 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433637265|ref|YP_007283025.1| - 1e-08 34.7 0.1 2.1e-08 33.7 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|433637265|ref|YP_007283025.1| - 2.9e-05 23.7 0.1 7.7e-05 22.3 0.1 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ZT_dimer PF16916.5 gi|433637265|ref|YP_007283025.1| - 0.024 14.8 0.5 0.33 11.1 0.1 2.9 3 1 0 3 3 3 0 Dimerisation domain of Zinc Transporter Shikimate_DH PF01488.20 gi|433637265|ref|YP_007283025.1| - 0.04 14.0 0.0 0.08 13.0 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 gi|433637265|ref|YP_007283025.1| - 0.066 13.5 0.1 0.15 12.3 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain zinc_ribbon_9 PF14369.6 gi|433637267|ref|YP_007283027.1| - 0.42 10.9 6.0 12 6.3 6.0 2.4 1 1 0 1 1 1 0 zinc-ribbon MFS_1 PF07690.16 gi|433637268|ref|YP_007283028.1| - 5e-19 68.4 41.9 3.8e-14 52.4 8.5 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|433637268|ref|YP_007283028.1| - 1.1e-18 67.0 4.8 1.1e-18 67.0 4.8 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector HTH_20 PF12840.7 gi|433637269|ref|YP_007283029.1| - 4.5e-07 29.8 0.0 1.1e-06 28.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain DZR PF12773.7 gi|433637269|ref|YP_007283029.1| - 0.0021 18.1 1.4 0.19 11.8 0.2 2.3 2 0 0 2 2 2 2 Double zinc ribbon CpXC PF14353.6 gi|433637269|ref|YP_007283029.1| - 0.038 14.0 0.2 0.11 12.6 0.0 1.9 2 0 0 2 2 2 0 CpXC protein zf-NADH-PPase PF09297.11 gi|433637269|ref|YP_007283029.1| - 0.05 13.3 0.5 2.5 7.8 0.0 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.6 gi|433637269|ref|YP_007283029.1| - 0.35 10.8 7.5 0.37 10.7 0.4 2.9 3 0 0 3 3 3 0 Nudix N-terminal RNA_POL_M_15KD PF02150.16 gi|433637269|ref|YP_007283029.1| - 2.4 8.1 7.5 4.5 7.2 0.1 3.1 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit CPBP PF02517.16 gi|433637270|ref|YP_007283030.1| - 1.5e-16 60.5 5.6 1.5e-16 60.5 5.6 2.1 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease Hjc PF01870.18 gi|433637271|ref|YP_007283031.1| - 7.6e-31 106.0 0.0 1.1e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Usp PF00582.26 gi|433637272|ref|YP_007283032.1| - 6.7e-30 104.5 1.3 8.6e-30 104.1 1.3 1.1 1 0 0 1 1 1 1 Universal stress protein family Acyl-CoA_dh_1 PF00441.24 gi|433637273|ref|YP_007283033.1| - 3.9e-31 108.3 5.4 1.6e-30 106.3 2.3 2.8 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433637273|ref|YP_007283033.1| - 2e-16 60.0 0.0 3.7e-15 55.9 0.0 2.3 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain AidB_N PF18158.1 gi|433637273|ref|YP_007283033.1| - 1.7e-15 57.3 0.0 3.4e-15 56.3 0.0 1.5 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|433637273|ref|YP_007283033.1| - 5.8e-06 26.6 9.3 0.0017 18.6 0.0 3.3 3 0 0 3 3 3 2 Acyl-CoA dehydrogenase, C-terminal domain SWIM PF04434.17 gi|433637274|ref|YP_007283034.1| - 5.1e-05 22.8 0.0 0.00013 21.5 0.0 1.7 1 0 0 1 1 1 1 SWIM zinc finger PspB PF06667.12 gi|433637275|ref|YP_007283035.1| - 0.021 14.8 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 Phage shock protein B Col_cuticle_N PF01484.17 gi|433637275|ref|YP_007283035.1| - 0.26 11.4 0.1 0.26 11.4 0.1 2.1 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain CbtB PF09489.10 gi|433637275|ref|YP_007283035.1| - 2.8 8.1 5.9 14 5.9 0.2 2.2 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtB) HisG PF01634.18 gi|433637276|ref|YP_007283036.1| - 3.3e-48 163.7 0.1 4.6e-48 163.2 0.1 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|433637276|ref|YP_007283036.1| - 5.8e-26 90.4 0.0 1.2e-25 89.4 0.0 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|433637276|ref|YP_007283036.1| - 0.00012 22.1 0.0 0.00024 21.1 0.0 1.5 1 1 0 1 1 1 1 NMT1/THI5 like YbbR PF07949.12 gi|433637276|ref|YP_007283036.1| - 0.064 13.6 0.7 0.16 12.4 0.7 1.7 1 0 0 1 1 1 0 YbbR-like protein KAR9 PF08580.10 gi|433637276|ref|YP_007283036.1| - 0.15 10.6 0.2 0.19 10.2 0.2 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 TraB PF01963.17 gi|433637277|ref|YP_007283037.1| - 0.19 11.6 0.1 4.9 7.0 0.0 2.1 1 1 0 2 2 2 0 TraB family DZR PF12773.7 gi|433637278|ref|YP_007283038.1| - 0.027 14.5 0.3 0.039 14.0 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433637278|ref|YP_007283038.1| - 0.22 11.3 3.8 1.4 8.7 3.2 2.4 2 1 0 2 2 2 0 zinc-ribbon domain Hexapep PF00132.24 gi|433637279|ref|YP_007283039.1| - 9.6e-08 31.5 5.6 0.001 18.7 0.5 3.4 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433637279|ref|YP_007283039.1| - 0.02 14.6 7.1 0.64 9.8 0.2 3.0 3 1 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase DUF550 PF04447.12 gi|433637280|ref|YP_007283040.1| - 0.11 12.6 0.1 0.23 11.6 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF550) MacB_PCD PF12704.7 gi|433637281|ref|YP_007283041.1| - 5.2e-19 69.4 7.3 5.2e-19 69.4 7.3 2.4 3 1 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|433637281|ref|YP_007283041.1| - 2.4e-15 56.8 1.0 2.4e-15 56.8 1.0 2.9 3 0 0 3 3 3 1 FtsX-like permease family SpoIIIAH PF12685.7 gi|433637281|ref|YP_007283041.1| - 0.2 11.5 1.3 0.33 10.7 1.3 1.3 1 0 0 1 1 1 0 SpoIIIAH-like protein UPF0182 PF03699.13 gi|433637281|ref|YP_007283041.1| - 0.59 8.2 1.1 0.89 7.6 1.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) ABC_tran PF00005.27 gi|433637282|ref|YP_007283042.1| - 3.1e-35 121.7 0.0 4.1e-35 121.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637282|ref|YP_007283042.1| - 1.6e-07 31.4 0.1 0.017 14.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637282|ref|YP_007283042.1| - 2.6e-07 30.3 0.0 3e-06 26.9 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433637282|ref|YP_007283042.1| - 1.2e-05 24.9 0.1 3.7e-05 23.4 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433637282|ref|YP_007283042.1| - 0.00088 19.7 0.6 0.0019 18.6 0.6 1.8 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433637282|ref|YP_007283042.1| - 0.00095 19.1 0.0 0.0022 17.9 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_25 PF13481.6 gi|433637282|ref|YP_007283042.1| - 0.012 15.2 0.1 0.07 12.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|433637282|ref|YP_007283042.1| - 0.015 15.4 0.8 0.15 12.1 0.8 2.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 gi|433637282|ref|YP_007283042.1| - 0.018 15.6 0.0 0.029 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433637282|ref|YP_007283042.1| - 0.019 14.7 0.2 0.052 13.3 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|433637282|ref|YP_007283042.1| - 0.09 13.1 0.6 0.22 11.8 0.2 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|433637282|ref|YP_007283042.1| - 0.22 10.4 0.0 0.31 9.9 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain DUF87 PF01935.17 gi|433637282|ref|YP_007283042.1| - 0.28 11.2 0.4 0.51 10.4 0.4 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Trypsin_2 PF13365.6 gi|433637283|ref|YP_007283043.1| - 0.0061 17.5 1.2 0.026 15.4 1.2 2.0 1 1 0 1 1 1 1 Trypsin-like peptidase domain DUF402 PF04167.13 gi|433637285|ref|YP_007283045.1| - 7.4e-16 58.1 1.0 1.5e-15 57.1 1.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF402) S1 PF00575.23 gi|433637285|ref|YP_007283045.1| - 0.13 12.6 0.1 0.34 11.3 0.1 1.8 1 1 0 1 1 1 0 S1 RNA binding domain OrfB_IS605 PF01385.19 gi|433637286|ref|YP_007283046.1| - 1.5e-23 83.3 0.1 5.8e-23 81.4 0.1 2.0 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|433637286|ref|YP_007283046.1| - 2.2e-21 75.6 0.2 2.2e-21 75.6 0.2 1.9 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|433637286|ref|YP_007283046.1| - 4.6e-06 26.0 0.4 1e-05 24.9 0.4 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Clusterin PF01093.17 gi|433637286|ref|YP_007283046.1| - 0.025 13.6 0.4 0.038 13.1 0.0 1.5 2 0 0 2 2 2 0 Clusterin Zn-ribbon_8 PF09723.10 gi|433637286|ref|YP_007283046.1| - 0.085 13.0 5.5 0.35 11.0 0.3 2.8 3 0 0 3 3 3 0 Zinc ribbon domain Clr5 PF14420.6 gi|433637286|ref|YP_007283046.1| - 0.1 12.8 0.7 0.24 11.6 0.7 1.6 1 0 0 1 1 1 0 Clr5 domain DZR PF12773.7 gi|433637286|ref|YP_007283046.1| - 0.17 11.9 1.6 0.41 10.7 1.6 1.7 1 0 0 1 1 1 0 Double zinc ribbon Rubredoxin_2 PF18073.1 gi|433637286|ref|YP_007283046.1| - 0.32 10.7 2.1 1.4 8.7 2.3 2.0 1 1 1 2 2 2 0 Rubredoxin metal binding domain Ribosomal_L37e PF01907.19 gi|433637286|ref|YP_007283046.1| - 10 6.4 9.9 10 6.4 2.9 3.3 2 1 1 3 3 3 0 Ribosomal protein L37e Y1_Tnp PF01797.16 gi|433637287|ref|YP_007283047.1| - 1.2e-35 122.2 0.0 1.3e-35 122.1 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like IQ_SEC7_PH PF16453.5 gi|433637287|ref|YP_007283047.1| - 0.025 14.5 0.0 0.036 14.0 0.0 1.5 1 1 0 1 1 1 0 PH domain T2SSM PF04612.12 gi|433637287|ref|YP_007283047.1| - 0.084 12.9 0.0 0.098 12.7 0.0 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M TAT_signal PF10518.9 gi|433637288|ref|YP_007283048.1| - 0.031 14.1 3.3 0.071 13.0 3.3 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence HD_5 PF13487.6 gi|433637288|ref|YP_007283048.1| - 0.16 12.2 0.0 0.49 10.7 0.0 1.8 2 0 0 2 2 2 0 HD domain Lum_binding PF00677.17 gi|433637289|ref|YP_007283049.1| - 1.3e-46 156.5 2.2 8.4e-23 80.2 0.1 2.1 2 0 0 2 2 2 2 Lumazine binding domain KN_motif PF12075.8 gi|433637289|ref|YP_007283049.1| - 0.035 13.9 0.2 0.12 12.2 0.1 2.0 2 0 0 2 2 2 0 KN motif CsrA PF02599.16 gi|433637289|ref|YP_007283049.1| - 0.06 13.3 0.6 5 7.1 0.2 2.4 2 0 0 2 2 2 0 Global regulator protein family DUF1418 PF07214.12 gi|433637290|ref|YP_007283050.1| - 0.26 11.2 1.0 0.64 9.9 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) Peptidase_M24 PF00557.24 gi|433637291|ref|YP_007283051.1| - 8.3e-06 25.6 0.3 1.3e-05 25.0 0.3 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 UvrD-helicase PF00580.21 gi|433637292|ref|YP_007283052.1| - 1.5e-24 87.1 0.2 4.4e-11 42.9 0.2 2.3 2 0 0 2 2 2 2 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|433637292|ref|YP_007283052.1| - 1.2e-23 84.1 0.0 2.8e-23 82.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain UvrD_C PF13361.6 gi|433637292|ref|YP_007283052.1| - 1.2e-12 47.9 0.0 1.1e-08 34.9 0.0 2.4 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 gi|433637292|ref|YP_007283052.1| - 2.1e-09 37.1 0.7 0.0036 17.1 0.1 2.9 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|433637292|ref|YP_007283052.1| - 2.4e-09 37.2 0.1 0.00011 22.0 0.0 3.1 3 0 0 3 3 3 2 AAA domain Viral_helicase1 PF01443.18 gi|433637292|ref|YP_007283052.1| - 5.9e-06 26.2 0.0 2 8.1 0.0 4.0 4 0 0 4 4 4 2 Viral (Superfamily 1) RNA helicase Herpes_ori_bp PF02399.15 gi|433637292|ref|YP_007283052.1| - 0.00064 17.9 0.0 0.001 17.2 0.0 1.2 1 0 0 1 1 1 1 Origin of replication binding protein AAA_22 PF13401.6 gi|433637292|ref|YP_007283052.1| - 0.002 18.4 0.1 1.1 9.5 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_11 PF13086.6 gi|433637292|ref|YP_007283052.1| - 0.0026 17.6 0.0 0.0072 16.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain DEAD PF00270.29 gi|433637292|ref|YP_007283052.1| - 0.016 15.0 0.0 1.7 8.4 0.0 2.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_25 PF13481.6 gi|433637292|ref|YP_007283052.1| - 0.093 12.3 1.3 0.41 10.2 0.0 2.6 3 0 0 3 3 3 0 AAA domain DUF2075 PF09848.9 gi|433637292|ref|YP_007283052.1| - 0.11 11.7 0.0 1.1 8.4 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 gi|433637292|ref|YP_007283052.1| - 0.17 12.3 1.0 1.9 8.9 0.6 2.8 1 1 2 3 3 3 0 AAA domain AAA_16 PF13191.6 gi|433637292|ref|YP_007283052.1| - 0.45 10.9 2.2 2.5 8.5 0.0 2.7 3 0 0 3 3 3 0 AAA ATPase domain Zn-ribbon_8 PF09723.10 gi|433637293|ref|YP_007283053.1| - 0.011 15.8 2.0 0.019 15.1 2.0 1.4 1 0 0 1 1 1 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|433637293|ref|YP_007283053.1| - 0.046 13.2 2.0 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|433637294|ref|YP_007283054.1| - 0.0066 16.5 0.3 0.0066 16.5 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|433637294|ref|YP_007283054.1| - 0.046 13.1 3.1 0.046 13.1 3.1 1.6 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433637294|ref|YP_007283054.1| - 0.059 13.5 4.3 0.2 11.8 0.5 2.2 1 1 1 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|433637294|ref|YP_007283054.1| - 0.07 12.7 1.5 0.16 11.5 1.5 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|433637294|ref|YP_007283054.1| - 0.076 12.8 2.0 0.14 11.9 2.0 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-tcix PF14952.6 gi|433637294|ref|YP_007283054.1| - 0.15 11.7 3.4 0.31 10.7 3.5 1.5 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding YhfH PF14149.6 gi|433637294|ref|YP_007283054.1| - 2.2 8.3 6.9 14 5.7 6.1 2.0 1 1 1 2 2 2 0 YhfH-like protein ThiF PF00899.21 gi|433637295|ref|YP_007283055.1| - 5.7e-65 219.1 0.0 7.5e-65 218.7 0.0 1.0 1 0 0 1 1 1 1 ThiF family PglD_N PF17836.1 gi|433637295|ref|YP_007283055.1| - 0.016 15.8 0.2 0.038 14.6 0.1 1.7 2 0 0 2 2 2 0 PglD N-terminal domain Shikimate_DH PF01488.20 gi|433637295|ref|YP_007283055.1| - 0.03 14.4 0.1 0.054 13.5 0.1 1.4 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|433637295|ref|YP_007283055.1| - 0.076 13.3 2.6 0.41 10.9 2.6 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain HalOD1 PF18545.1 gi|433637296|ref|YP_007283056.1| - 4.9e-20 71.6 0.1 6.9e-20 71.1 0.1 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 Peripla_BP_2 PF01497.18 gi|433637297|ref|YP_007283057.1| - 9.2e-23 81.0 0.5 1.5e-22 80.3 0.5 1.4 1 0 0 1 1 1 1 Periplasmic binding protein GIDE PF12483.8 gi|433637298|ref|YP_007283058.1| - 1.1e-08 34.7 0.0 6.2e-08 32.2 0.0 2.0 1 1 0 1 1 1 1 E3 Ubiquitin ligase TAT_signal PF10518.9 gi|433637299|ref|YP_007283059.1| - 0.0078 16.0 0.2 0.021 14.7 0.2 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence HTH_24 PF13412.6 gi|433637300|ref|YP_007283060.1| - 2.2e-06 27.1 0.0 3.6e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433637300|ref|YP_007283060.1| - 2.2e-05 24.2 0.1 6e-05 22.9 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433637300|ref|YP_007283060.1| - 0.0006 19.6 0.0 0.0014 18.4 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|433637300|ref|YP_007283060.1| - 0.0045 16.9 0.0 0.0084 16.1 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF4897 PF16238.5 gi|433637300|ref|YP_007283060.1| - 0.019 14.8 0.0 0.03 14.2 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4897) SpdB PF05122.13 gi|433637300|ref|YP_007283060.1| - 0.086 13.0 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Mobile element transfer protein MarR PF01047.22 gi|433637300|ref|YP_007283060.1| - 0.11 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family CDC45 PF02724.14 gi|433637301|ref|YP_007283061.1| - 1e-07 30.7 21.1 1.3e-07 30.3 21.1 1.1 1 0 0 1 1 1 1 CDC45-like protein CarboxypepD_reg PF13620.6 gi|433637301|ref|YP_007283061.1| - 0.0015 18.7 0.2 0.0015 18.7 0.2 2.0 1 1 1 2 2 2 1 Carboxypeptidase regulatory-like domain bMG3 PF11974.8 gi|433637301|ref|YP_007283061.1| - 0.0068 16.4 1.0 0.011 15.7 1.0 1.5 1 1 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain CarbopepD_reg_2 PF13715.6 gi|433637301|ref|YP_007283061.1| - 0.0077 16.2 0.2 0.014 15.3 0.2 1.5 1 0 0 1 1 1 1 CarboxypepD_reg-like domain DUF4198 PF10670.9 gi|433637301|ref|YP_007283061.1| - 0.016 15.6 0.4 0.028 14.8 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4198) Presenilin PF01080.17 gi|433637301|ref|YP_007283061.1| - 3.5 6.3 4.9 3.4 6.3 4.9 1.2 1 0 0 1 1 1 0 Presenilin TFIIA PF03153.13 gi|433637302|ref|YP_007283062.1| - 0.014 15.4 25.1 0.021 14.9 25.1 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF1801 PF08818.11 gi|433637303|ref|YP_007283063.1| - 1.2e-14 54.6 0.0 1.5e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DU1801) Acetyltransf_3 PF13302.7 gi|433637304|ref|YP_007283064.1| - 4.5e-18 66.3 0.1 5.7e-18 65.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain TFIIS_C PF01096.18 gi|433637306|ref|YP_007283066.1| - 0.098 12.5 0.5 0.29 11.0 0.0 1.8 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_9 PF14369.6 gi|433637306|ref|YP_007283066.1| - 0.71 10.2 3.4 4.2 7.7 1.3 2.2 2 0 0 2 2 2 0 zinc-ribbon zinc_ribbon_2 PF13240.6 gi|433637307|ref|YP_007283067.1| - 9.1e-08 31.6 3.5 1.4e-07 31.0 3.5 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|433637307|ref|YP_007283067.1| - 3.5e-06 26.9 1.2 5e-06 26.4 1.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|433637307|ref|YP_007283067.1| - 0.0001 21.5 1.7 0.00016 21.0 1.7 1.3 1 0 0 1 1 1 1 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|433637307|ref|YP_007283067.1| - 0.0019 18.0 1.4 0.23 11.4 0.1 2.3 2 0 0 2 2 2 2 Nudix N-terminal zinc_ribbon_15 PF17032.5 gi|433637307|ref|YP_007283067.1| - 0.009 16.7 2.8 0.013 16.2 2.8 1.3 1 0 0 1 1 1 1 zinc-ribbon family DUF2116 PF09889.9 gi|433637307|ref|YP_007283067.1| - 0.014 15.4 1.2 0.014 15.4 1.2 2.7 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-NADH-PPase PF09297.11 gi|433637307|ref|YP_007283067.1| - 0.19 11.5 0.1 0.19 11.5 0.1 2.3 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|433637307|ref|YP_007283067.1| - 0.19 11.3 2.6 0.68 9.6 0.4 2.1 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger SpoIIID PF12116.8 gi|433637308|ref|YP_007283068.1| - 0.17 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Stage III sporulation protein D DUF1322 PF07032.11 gi|433637309|ref|YP_007283069.1| - 0.22 12.0 0.0 0.33 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1322) HTH_20 PF12840.7 gi|433637310|ref|YP_007283070.1| - 0.031 14.3 0.9 0.066 13.3 0.9 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain Polysacc_synt PF01943.17 gi|433637311|ref|YP_007283071.1| - 1.8e-19 70.2 8.6 1.8e-19 70.2 8.6 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|433637311|ref|YP_007283071.1| - 3.8e-18 65.7 7.2 3.8e-18 65.7 7.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433637311|ref|YP_007283071.1| - 2.7e-08 34.0 16.4 2.7e-08 34.0 16.4 4.4 1 1 3 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433637311|ref|YP_007283071.1| - 0.073 11.7 25.1 1.7 7.2 25.0 2.3 1 1 0 1 1 1 0 Lipid II flippase MurJ Iron_transport PF10634.9 gi|433637312|ref|YP_007283072.1| - 1.6e-05 25.1 0.0 0.025 14.8 0.0 2.6 3 0 0 3 3 3 2 Fe2+ transport protein SnoaL PF07366.12 gi|433637314|ref|YP_007283074.1| - 1.1e-37 128.7 0.3 1.2e-37 128.5 0.3 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|433637314|ref|YP_007283074.1| - 1.6e-21 76.9 2.9 1.8e-21 76.6 2.9 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|433637314|ref|YP_007283074.1| - 3.6e-08 33.8 0.4 5.3e-08 33.2 0.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) adh_short_C2 PF13561.6 gi|433637315|ref|YP_007283075.1| - 3.1e-75 252.8 0.7 3.6e-75 252.5 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433637315|ref|YP_007283075.1| - 9.4e-58 194.9 0.2 1.1e-57 194.6 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433637315|ref|YP_007283075.1| - 4.2e-10 39.8 0.2 8.9e-10 38.8 0.2 1.5 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433637315|ref|YP_007283075.1| - 0.00021 20.8 0.3 0.00033 20.2 0.3 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|433637315|ref|YP_007283075.1| - 0.0038 17.1 1.1 0.0059 16.5 1.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Aldo_ket_red PF00248.21 gi|433637316|ref|YP_007283076.1| - 1.5e-62 211.5 0.0 4.3e-60 203.4 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Seadorna_VP6 PF07407.11 gi|433637316|ref|YP_007283076.1| - 0.081 11.9 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP6 protein GFO_IDH_MocA PF01408.22 gi|433637317|ref|YP_007283077.1| - 1.8e-25 90.1 0.6 3.2e-25 89.3 0.6 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 gi|433637317|ref|YP_007283077.1| - 1.5e-10 41.5 0.1 2.7e-10 40.7 0.1 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_3 PF03447.16 gi|433637317|ref|YP_007283077.1| - 1.2e-06 29.1 1.0 1.2e-06 29.1 1.0 2.4 3 0 0 3 3 3 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|433637317|ref|YP_007283077.1| - 2.8e-05 24.6 0.1 8.4e-05 23.0 0.1 1.8 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|433637317|ref|YP_007283077.1| - 4.1e-05 24.2 0.2 0.0003 21.4 0.3 2.1 2 0 0 2 2 2 1 CoA binding domain Sacchrp_dh_NADP PF03435.18 gi|433637317|ref|YP_007283077.1| - 8.1e-05 22.9 1.5 0.00014 22.1 1.5 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|433637317|ref|YP_007283077.1| - 0.00062 19.8 0.1 0.00097 19.2 0.1 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA_C PF02894.17 gi|433637317|ref|YP_007283077.1| - 0.0016 18.4 0.0 0.0027 17.7 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_2 PF03446.15 gi|433637317|ref|YP_007283077.1| - 0.0016 18.6 0.3 0.0035 17.5 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|433637317|ref|YP_007283077.1| - 0.003 16.9 0.1 0.0053 16.1 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Rossmann-like PF10727.9 gi|433637317|ref|YP_007283077.1| - 0.078 12.8 0.7 0.14 12.0 0.7 1.5 1 0 0 1 1 1 0 Rossmann-like domain DapB_N PF01113.20 gi|433637317|ref|YP_007283077.1| - 0.079 13.1 0.1 0.19 11.8 0.1 1.7 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus G6PD_N PF00479.22 gi|433637317|ref|YP_007283077.1| - 0.2 12.3 0.0 0.36 11.4 0.0 1.4 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain Vma12 PF11712.8 gi|433637318|ref|YP_007283078.1| - 0.65 10.1 1.8 0.75 9.9 1.8 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Chordopox_A13L PF05961.11 gi|433637318|ref|YP_007283078.1| - 0.67 10.2 3.1 1.3 9.3 3.1 1.4 1 0 0 1 1 1 0 Chordopoxvirus A13L protein Phage_holin_3_6 PF07332.11 gi|433637318|ref|YP_007283078.1| - 3 7.9 12.3 3.8 7.6 12.3 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Peptidase_M32 PF02074.15 gi|433637320|ref|YP_007283080.1| - 5.6e-161 536.6 0.0 6.3e-161 536.4 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase DUF805 PF05656.14 gi|433637322|ref|YP_007283082.1| - 2 8.9 6.2 4.6 7.7 6.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DUF2628 PF10947.8 gi|433637322|ref|YP_007283082.1| - 8.2 6.9 10.4 2.1 8.8 6.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2628) Peptidase_M32 PF02074.15 gi|433637324|ref|YP_007283084.1| - 2.3e-178 593.9 0.0 2.7e-178 593.7 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase Tox-REase-5 PF15648.6 gi|433637324|ref|YP_007283084.1| - 0.044 14.3 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 5 GCIP PF13324.6 gi|433637324|ref|YP_007283084.1| - 0.22 11.1 0.7 0.33 10.5 0.7 1.2 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting TrmB PF01978.19 gi|433637326|ref|YP_007283086.1| - 1.7e-05 24.6 0.0 4.2e-05 23.4 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF5063 PF16702.5 gi|433637326|ref|YP_007283086.1| - 0.1 13.0 0.3 0.14 12.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) Peptidase_M20 PF01546.28 gi|433637327|ref|YP_007283087.1| - 9.1e-24 84.3 12.3 1.7e-22 80.2 12.3 2.1 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|433637327|ref|YP_007283087.1| - 6e-15 55.1 0.1 1.2e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Cadherin_4 PF17803.1 gi|433637327|ref|YP_007283087.1| - 0.83 10.3 3.8 1.4 9.6 0.6 2.8 2 2 0 2 2 2 0 Bacterial cadherin-like domain Protoglobin PF11563.8 gi|433637328|ref|YP_007283088.1| - 3.4e-30 105.0 3.0 1.6e-26 93.1 0.3 3.1 3 0 0 3 3 3 2 Protoglobin MCPsignal PF00015.21 gi|433637328|ref|YP_007283088.1| - 4.5e-24 85.2 43.7 6.9e-22 78.1 22.2 3.4 1 1 2 3 3 3 3 Methyl-accepting chemotaxis protein (MCP) signalling domain BLOC1_2 PF10046.9 gi|433637328|ref|YP_007283088.1| - 6.7e-05 23.1 11.3 0.47 10.8 0.1 5.2 3 2 2 6 6 6 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF948 PF06103.11 gi|433637328|ref|YP_007283088.1| - 0.0068 16.6 23.7 0.16 12.2 2.8 5.0 1 1 3 4 4 4 1 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 gi|433637328|ref|YP_007283088.1| - 0.0078 16.3 15.2 0.48 10.5 1.0 4.4 1 1 4 5 5 5 1 Protein of unknown function (DUF1664) KxDL PF10241.9 gi|433637328|ref|YP_007283088.1| - 0.011 15.9 2.7 28 5.1 0.3 5.1 4 1 2 6 6 6 0 Uncharacterized conserved protein BORCS7 PF16088.5 gi|433637328|ref|YP_007283088.1| - 0.025 14.8 1.9 6.3 7.1 0.0 3.6 2 1 0 3 3 3 0 BLOC-1-related complex sub-unit 7 CREPT PF16566.5 gi|433637328|ref|YP_007283088.1| - 0.14 12.4 7.2 3.2 7.9 0.7 4.2 1 1 3 4 4 4 0 Cell-cycle alteration and expression-elevated protein in tumour DUF3450 PF11932.8 gi|433637328|ref|YP_007283088.1| - 0.17 11.2 19.1 1.4 8.2 3.2 3.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) IFT57 PF10498.9 gi|433637328|ref|YP_007283088.1| - 0.19 10.6 13.5 0.61 9.0 7.3 2.3 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Syntaxin_2 PF14523.6 gi|433637328|ref|YP_007283088.1| - 0.29 11.5 1.7 5.6 7.4 0.1 3.5 1 1 2 3 3 3 0 Syntaxin-like protein FlgN PF05130.12 gi|433637328|ref|YP_007283088.1| - 0.32 11.5 16.4 0.59 10.6 2.2 4.1 2 1 0 3 3 3 0 FlgN protein DUF1759 PF03564.15 gi|433637328|ref|YP_007283088.1| - 0.35 10.8 4.0 30 4.5 0.1 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1759) NPV_P10 PF05531.12 gi|433637328|ref|YP_007283088.1| - 0.64 10.5 13.3 1.5 9.3 1.5 4.9 2 2 3 5 5 5 0 Nucleopolyhedrovirus P10 protein Atg14 PF10186.9 gi|433637328|ref|YP_007283088.1| - 0.76 8.8 6.1 1.3 8.0 0.2 2.2 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_13 PF13166.6 gi|433637328|ref|YP_007283088.1| - 0.78 8.3 17.6 0.39 9.3 8.9 2.1 1 1 1 2 2 2 0 AAA domain Baculo_PEP_C PF04513.12 gi|433637328|ref|YP_007283088.1| - 0.9 9.6 13.0 0.87 9.6 0.3 4.0 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus ISG65-75 PF11727.8 gi|433637328|ref|YP_007283088.1| - 1 8.5 29.8 0.3 10.3 9.0 3.2 1 1 2 3 3 3 0 Invariant surface glycoprotein DUF677 PF05055.12 gi|433637328|ref|YP_007283088.1| - 1.4 7.8 18.4 0.12 11.2 0.6 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF677) DUF16 PF01519.16 gi|433637328|ref|YP_007283088.1| - 1.5 9.4 6.1 10 6.7 0.3 3.9 2 1 3 5 5 5 0 Protein of unknown function DUF16 FH2 PF02181.23 gi|433637328|ref|YP_007283088.1| - 1.5 7.8 4.4 0.93 8.5 1.3 2.0 1 1 0 2 2 2 0 Formin Homology 2 Domain Syntaxin-6_N PF09177.11 gi|433637328|ref|YP_007283088.1| - 1.6 9.3 19.2 0.33 11.5 4.5 3.9 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF1957 PF09210.11 gi|433637328|ref|YP_007283088.1| - 2.4 8.6 6.5 11 6.5 0.2 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF1957) Prominin PF05478.11 gi|433637328|ref|YP_007283088.1| - 2.6 5.9 3.5 3.7 5.4 0.3 2.1 1 1 0 2 2 2 0 Prominin Laminin_II PF06009.12 gi|433637328|ref|YP_007283088.1| - 3.8 7.5 24.8 8.2 6.4 2.7 4.3 1 1 5 6 6 6 0 Laminin Domain II Spc7 PF08317.11 gi|433637328|ref|YP_007283088.1| - 4.2 6.2 19.6 4.6 6.0 6.0 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein CCDC84 PF14968.6 gi|433637328|ref|YP_007283088.1| - 4.6 6.8 6.8 3 7.4 3.4 1.9 2 0 0 2 2 2 0 Coiled coil protein 84 DUF3584 PF12128.8 gi|433637328|ref|YP_007283088.1| - 6.3 4.2 25.4 10 3.4 25.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HisKA PF00512.25 gi|433637328|ref|YP_007283088.1| - 9.2 6.4 12.7 2.2 8.4 0.5 4.9 4 2 0 4 4 4 0 His Kinase A (phospho-acceptor) domain TPR_12 PF13424.6 gi|433637329|ref|YP_007283089.1| - 1.1e-30 105.7 55.7 8.3e-10 38.8 0.0 8.7 3 3 6 10 10 10 7 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|433637329|ref|YP_007283089.1| - 4.1e-17 62.6 32.4 1.5e-08 34.4 5.1 4.3 2 1 2 4 4 4 3 MalT-like TPR region AAA_16 PF13191.6 gi|433637329|ref|YP_007283089.1| - 6.4e-16 59.2 0.1 6.4e-16 59.2 0.1 3.9 4 1 0 4 4 3 1 AAA ATPase domain TPR_2 PF07719.17 gi|433637329|ref|YP_007283089.1| - 5.6e-14 51.1 33.2 0.017 15.2 0.0 11.8 13 1 0 13 13 10 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|433637329|ref|YP_007283089.1| - 1.5e-12 46.9 37.9 0.00015 21.5 0.1 10.8 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|433637329|ref|YP_007283089.1| - 1e-10 40.9 10.2 0.098 12.5 0.0 9.7 11 0 0 11 11 11 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|433637329|ref|YP_007283089.1| - 4.1e-10 39.1 6.2 4.8 7.7 0.0 8.7 9 0 0 9 9 8 2 Tetratricopeptide repeat AAA_22 PF13401.6 gi|433637329|ref|YP_007283089.1| - 2.1e-06 28.1 0.0 7.3e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain TPR_7 PF13176.6 gi|433637329|ref|YP_007283089.1| - 6.3e-06 25.9 37.6 0.0032 17.4 0.1 10.5 11 1 1 12 12 11 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|433637329|ref|YP_007283089.1| - 1.6e-05 25.4 6.4 0.0015 19.1 0.5 8.0 7 2 2 9 9 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|433637329|ref|YP_007283089.1| - 0.00011 22.7 61.3 0.96 10.4 0.1 14.0 6 1 8 14 14 14 3 Tetratricopeptide repeat RPN7 PF10602.9 gi|433637329|ref|YP_007283089.1| - 0.00019 21.2 3.6 0.082 12.6 0.2 3.4 2 1 2 4 4 4 2 26S proteasome subunit RPN7 NACHT PF05729.12 gi|433637329|ref|YP_007283089.1| - 0.00044 20.2 0.0 0.03 14.3 0.0 3.1 3 0 0 3 3 3 1 NACHT domain HTH_27 PF13463.6 gi|433637329|ref|YP_007283089.1| - 0.0017 18.8 1.0 0.026 15.0 0.1 3.2 3 0 0 3 3 2 1 Winged helix DNA-binding domain PadR PF03551.14 gi|433637329|ref|YP_007283089.1| - 0.0057 16.6 0.0 0.018 15.0 0.0 1.9 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family NTPase_1 PF03266.15 gi|433637329|ref|YP_007283089.1| - 0.016 15.1 0.1 0.037 14.0 0.1 1.6 1 0 0 1 1 1 0 NTPase DUF4364 PF14277.6 gi|433637329|ref|YP_007283089.1| - 0.023 14.4 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) AAA_18 PF13238.6 gi|433637329|ref|YP_007283089.1| - 0.026 15.0 0.0 0.1 13.1 0.0 2.1 1 0 0 1 1 1 0 AAA domain TPR_6 PF13174.6 gi|433637329|ref|YP_007283089.1| - 0.027 15.1 26.9 0.7 10.7 0.0 9.7 11 1 1 12 12 8 0 Tetratricopeptide repeat MeaB PF03308.16 gi|433637329|ref|YP_007283089.1| - 0.027 13.5 0.1 0.059 12.3 0.1 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATPase_2 PF01637.18 gi|433637329|ref|YP_007283089.1| - 0.031 14.2 0.0 0.22 11.4 0.0 2.1 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|433637329|ref|YP_007283089.1| - 0.033 14.5 0.0 0.14 12.5 0.0 2.0 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433637329|ref|YP_007283089.1| - 0.077 12.9 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase TrwB_AAD_bind PF10412.9 gi|433637329|ref|YP_007283089.1| - 0.094 11.6 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF1495 PF07381.11 gi|433637329|ref|YP_007283089.1| - 0.11 12.3 0.0 0.31 10.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) TniB PF05621.11 gi|433637329|ref|YP_007283089.1| - 0.13 11.7 0.0 0.29 10.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein Roc PF08477.13 gi|433637329|ref|YP_007283089.1| - 0.14 12.4 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Herpes_Helicase PF02689.14 gi|433637329|ref|YP_007283089.1| - 0.18 9.7 0.0 0.26 9.1 0.0 1.1 1 0 0 1 1 1 0 Helicase DSBA PF01323.20 gi|433637329|ref|YP_007283089.1| - 9.8 5.9 7.3 2.6 7.8 0.7 2.8 3 0 0 3 3 3 0 DSBA-like thioredoxin domain HATPase_c PF02518.26 gi|433637330|ref|YP_007283090.1| - 2.5e-17 63.4 0.3 1.1e-16 61.4 0.0 2.1 2 1 1 3 3 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|433637330|ref|YP_007283090.1| - 4.4e-17 62.2 0.0 1.2e-16 60.8 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|433637330|ref|YP_007283090.1| - 4.5e-12 46.2 0.0 1e-11 45.1 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|433637330|ref|YP_007283090.1| - 3.5e-10 39.9 0.0 1.2e-09 38.2 0.0 1.9 2 0 0 2 2 2 1 PAS fold HisKA PF00512.25 gi|433637330|ref|YP_007283090.1| - 2e-06 27.7 0.4 2e-06 27.7 0.4 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.12 gi|433637330|ref|YP_007283090.1| - 1e-05 25.7 0.0 3.7e-05 23.9 0.0 2.0 2 1 0 2 2 1 1 PAS fold HATPase_c_2 PF13581.6 gi|433637330|ref|YP_007283090.1| - 4.6e-05 23.4 0.3 0.0001 22.2 0.3 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|433637330|ref|YP_007283090.1| - 6.2e-05 22.9 0.0 0.00018 21.4 0.0 1.9 1 0 0 1 1 1 1 PAS domain SPOB_a PF14689.6 gi|433637330|ref|YP_007283090.1| - 0.00038 20.1 0.1 0.00089 18.9 0.1 1.5 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain HisKA_4TM PF16926.5 gi|433637330|ref|YP_007283090.1| - 0.0012 18.4 0.0 0.0024 17.5 0.0 1.5 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase PAS_7 PF12860.7 gi|433637330|ref|YP_007283090.1| - 0.0041 17.3 0.0 0.015 15.4 0.0 2.0 3 0 0 3 3 2 1 PAS fold HATPase_c_3 PF13589.6 gi|433637330|ref|YP_007283090.1| - 0.053 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF416 PF04222.12 gi|433637330|ref|YP_007283090.1| - 0.068 12.6 0.2 0.098 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF416) T2SSE PF00437.20 gi|433637331|ref|YP_007283091.1| - 6e-13 48.5 0.1 9.7e-13 47.8 0.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 gi|433637331|ref|YP_007283091.1| - 2.3e-05 24.8 0.0 5.6e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|433637331|ref|YP_007283091.1| - 0.00022 20.6 0.0 0.00066 19.0 0.0 1.8 1 0 0 1 1 1 1 Zeta toxin Thymidylate_kin PF02223.17 gi|433637331|ref|YP_007283091.1| - 0.00025 20.8 0.2 0.00088 19.0 0.0 2.0 2 1 0 2 2 2 1 Thymidylate kinase IstB_IS21 PF01695.17 gi|433637331|ref|YP_007283091.1| - 0.003 17.3 0.0 0.007 16.1 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|433637331|ref|YP_007283091.1| - 0.0037 17.7 0.0 0.0076 16.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) KH_1 PF00013.29 gi|433637331|ref|YP_007283091.1| - 0.0041 16.9 0.1 0.011 15.5 0.1 1.8 1 0 0 1 1 1 1 KH domain AAA_7 PF12775.7 gi|433637331|ref|YP_007283091.1| - 0.0043 16.6 0.0 0.0073 15.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region NTPase_1 PF03266.15 gi|433637331|ref|YP_007283091.1| - 0.005 16.8 0.0 0.012 15.5 0.0 1.7 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|433637331|ref|YP_007283091.1| - 0.0071 16.1 0.2 0.027 14.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|433637331|ref|YP_007283091.1| - 0.0085 15.8 0.0 0.024 14.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain KTI12 PF08433.10 gi|433637331|ref|YP_007283091.1| - 0.01 15.3 0.4 0.018 14.5 0.0 1.5 2 0 0 2 2 1 0 Chromatin associated protein KTI12 NB-ARC PF00931.22 gi|433637331|ref|YP_007283091.1| - 0.012 14.8 0.0 0.022 14.0 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain TsaE PF02367.17 gi|433637331|ref|YP_007283091.1| - 0.014 15.3 0.0 0.04 13.9 0.0 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RuvB_N PF05496.12 gi|433637331|ref|YP_007283091.1| - 0.016 15.0 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 gi|433637331|ref|YP_007283091.1| - 0.016 15.7 0.0 0.037 14.5 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 gi|433637331|ref|YP_007283091.1| - 0.017 15.7 1.1 0.025 15.1 0.0 1.9 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 gi|433637331|ref|YP_007283091.1| - 0.019 14.9 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 gi|433637331|ref|YP_007283091.1| - 0.022 14.8 0.0 0.046 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.20 gi|433637331|ref|YP_007283091.1| - 0.023 14.6 0.0 0.068 13.1 0.0 1.8 2 0 0 2 2 1 0 Adenylylsulphate kinase RsgA_GTPase PF03193.16 gi|433637331|ref|YP_007283091.1| - 0.024 14.5 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|433637331|ref|YP_007283091.1| - 0.026 14.7 0.1 0.12 12.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|433637331|ref|YP_007283091.1| - 0.029 14.8 0.0 0.055 13.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase KH_5 PF13184.6 gi|433637331|ref|YP_007283091.1| - 0.041 14.0 0.3 0.14 12.3 0.3 1.9 1 0 0 1 1 1 0 NusA-like KH domain AAA_28 PF13521.6 gi|433637331|ref|YP_007283091.1| - 0.043 14.1 0.0 0.16 12.2 0.0 2.0 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|433637331|ref|YP_007283091.1| - 0.044 14.0 0.0 0.096 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|433637331|ref|YP_007283091.1| - 0.052 13.6 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|433637331|ref|YP_007283091.1| - 0.053 13.6 0.0 0.42 10.7 0.0 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF2075 PF09848.9 gi|433637331|ref|YP_007283091.1| - 0.076 12.2 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.26 gi|433637331|ref|YP_007283091.1| - 0.11 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Viral_helicase1 PF01443.18 gi|433637331|ref|YP_007283091.1| - 0.13 11.9 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase KH_2 PF07650.17 gi|433637331|ref|YP_007283091.1| - 0.14 12.0 1.4 0.36 10.7 1.4 1.6 1 0 0 1 1 1 0 KH domain AAA_25 PF13481.6 gi|433637331|ref|YP_007283091.1| - 0.18 11.4 1.3 0.32 10.5 0.2 2.1 2 1 0 2 2 1 0 AAA domain ECF_trnsprt PF12822.7 gi|433637332|ref|YP_007283092.1| - 0.0045 17.1 2.3 0.009 16.1 2.3 1.4 1 1 0 1 1 1 1 ECF transporter, substrate-specific component Rhomboid PF01694.22 gi|433637332|ref|YP_007283092.1| - 0.27 11.2 7.3 1.3 9.1 7.3 2.1 1 1 0 1 1 1 0 Rhomboid family LapA_dom PF06305.11 gi|433637332|ref|YP_007283092.1| - 2 8.3 0.0 2 8.3 0.0 3.0 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain CPBP PF02517.16 gi|433637332|ref|YP_007283092.1| - 2.3 8.6 5.7 11 6.4 5.7 2.0 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease DsbD_2 PF13386.6 gi|433637332|ref|YP_007283092.1| - 8.9 6.2 11.1 6.8 6.6 0.6 2.0 1 1 1 2 2 2 0 Cytochrome C biogenesis protein transmembrane region HTH_24 PF13412.6 gi|433637333|ref|YP_007283093.1| - 2e-05 24.1 0.0 2.8e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433637333|ref|YP_007283093.1| - 0.00099 19.0 0.0 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|433637333|ref|YP_007283093.1| - 0.0015 18.5 0.0 0.002 18.0 0.0 1.2 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 gi|433637333|ref|YP_007283093.1| - 0.0015 18.1 0.1 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_27 PF13463.6 gi|433637333|ref|YP_007283093.1| - 0.0018 18.7 0.0 0.0025 18.3 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|433637333|ref|YP_007283093.1| - 0.003 17.4 0.1 0.0038 17.1 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|433637333|ref|YP_007283093.1| - 0.0044 16.9 0.0 0.0063 16.4 0.0 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|433637333|ref|YP_007283093.1| - 0.013 15.3 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_IclR PF09339.10 gi|433637333|ref|YP_007283093.1| - 0.017 14.9 0.0 0.042 13.7 0.0 1.6 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_12 PF08461.10 gi|433637333|ref|YP_007283093.1| - 0.025 14.5 0.1 0.066 13.2 0.1 1.7 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain PaaX PF07848.12 gi|433637333|ref|YP_007283093.1| - 0.028 14.6 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 PaaX-like protein Replic_Relax PF13814.6 gi|433637333|ref|YP_007283093.1| - 0.045 13.8 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_20 PF12840.7 gi|433637333|ref|YP_007283093.1| - 0.053 13.6 0.0 0.098 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|433637333|ref|YP_007283093.1| - 0.17 12.3 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein DUF5305 PF17231.2 gi|433637335|ref|YP_007283095.1| - 3.5e-48 163.9 0.0 8.7e-48 162.6 0.0 1.7 2 0 0 2 2 2 1 Family of unknown function (DUF5305) Peptidase_S24 PF00717.23 gi|433637336|ref|YP_007283096.1| - 1.1e-05 25.3 0.1 2.2e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 Peptidase S24-like OppC_N PF12911.7 gi|433637336|ref|YP_007283096.1| - 0.8 9.7 0.0 0.8 9.7 0.0 3.1 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C CARDB PF07705.11 gi|433637337|ref|YP_007283097.1| - 5.4e-08 33.0 3.5 4.9e-05 23.5 0.6 2.5 2 0 0 2 2 2 2 CARDB DUF1102 PF06510.11 gi|433637337|ref|YP_007283097.1| - 1.5e-05 25.2 0.2 0.003 17.7 0.2 2.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1102) ASH PF15780.5 gi|433637337|ref|YP_007283097.1| - 0.00012 22.2 0.4 0.0035 17.5 0.1 2.9 2 2 0 2 2 2 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Big_7 PF17957.1 gi|433637337|ref|YP_007283097.1| - 0.0015 19.3 13.8 0.0052 17.5 1.3 3.7 3 1 1 4 4 4 2 Bacterial Ig domain Ig_GlcNase PF18368.1 gi|433637337|ref|YP_007283097.1| - 0.0081 16.3 0.9 0.48 10.6 0.6 3.1 2 2 0 2 2 2 1 Exo-beta-D-glucosaminidase Ig-fold domain Fn3-like PF14310.6 gi|433637337|ref|YP_007283097.1| - 0.016 15.3 5.3 1.4 9.1 0.1 4.0 4 0 0 4 4 4 0 Fibronectin type III-like domain Calycin_like PF13944.6 gi|433637338|ref|YP_007283098.1| - 0.069 13.5 9.0 5.5 7.3 9.0 2.2 1 1 0 1 1 1 0 Calycin-like beta-barrel domain SusE PF14292.6 gi|433637340|ref|YP_007283100.1| - 0.67 10.2 4.3 0.84 9.9 0.1 2.8 2 1 0 2 2 2 0 SusE outer membrane protein Big_2 PF02368.18 gi|433637340|ref|YP_007283100.1| - 4.1 7.4 11.2 2.4 8.1 0.1 3.4 4 0 0 4 4 4 0 Bacterial Ig-like domain (group 2) DUF4781 PF16013.5 gi|433637341|ref|YP_007283101.1| - 0.0028 16.5 0.6 0.0032 16.3 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4781) ABC_tran PF00005.27 gi|433637342|ref|YP_007283102.1| - 9.2e-41 139.6 0.0 7.6e-21 75.1 0.0 2.7 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|433637342|ref|YP_007283102.1| - 3.9e-13 49.3 5.2 0.00028 20.4 0.1 4.4 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|433637342|ref|YP_007283102.1| - 1.8e-12 47.7 0.8 0.16 11.7 0.0 4.3 4 0 0 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system RLI PF04068.15 gi|433637342|ref|YP_007283102.1| - 5.8e-11 42.0 1.3 1.2e-10 41.0 1.3 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_16 PF13191.6 gi|433637342|ref|YP_007283102.1| - 1.6e-07 31.9 0.4 0.011 16.1 0.0 3.1 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 gi|433637342|ref|YP_007283102.1| - 7.1e-07 29.6 0.0 0.0062 16.8 0.0 2.9 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.6 gi|433637342|ref|YP_007283102.1| - 5.1e-06 27.1 1.1 0.1 13.1 0.3 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|433637342|ref|YP_007283102.1| - 1.1e-05 25.2 0.0 0.031 14.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain Rad17 PF03215.15 gi|433637342|ref|YP_007283102.1| - 1.9e-05 24.7 0.0 0.22 11.4 0.0 3.1 2 1 1 3 3 3 2 Rad17 P-loop domain AAA PF00004.29 gi|433637342|ref|YP_007283102.1| - 4.9e-05 23.8 0.0 0.16 12.4 0.0 2.9 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|433637342|ref|YP_007283102.1| - 9.8e-05 22.7 0.0 0.33 11.4 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_33 PF13671.6 gi|433637342|ref|YP_007283102.1| - 0.0003 20.9 0.1 0.29 11.3 0.0 2.8 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|433637342|ref|YP_007283102.1| - 0.0005 20.0 0.1 1 9.2 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Fer4 PF00037.27 gi|433637342|ref|YP_007283102.1| - 0.00057 19.6 1.6 0.00057 19.6 1.6 2.7 3 0 0 3 3 3 1 4Fe-4S binding domain AAA_29 PF13555.6 gi|433637342|ref|YP_007283102.1| - 0.00092 18.9 0.4 1.6 8.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|433637342|ref|YP_007283102.1| - 0.0014 18.7 0.1 2.5 8.2 0.0 3.5 3 1 0 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|433637342|ref|YP_007283102.1| - 0.0014 18.4 0.2 0.45 10.2 0.1 2.6 3 0 0 3 3 3 1 AAA ATPase domain NACHT PF05729.12 gi|433637342|ref|YP_007283102.1| - 0.0019 18.1 0.5 2.9 7.8 0.1 2.7 3 0 0 3 3 2 2 NACHT domain Fer4_6 PF12837.7 gi|433637342|ref|YP_007283102.1| - 0.0027 17.7 12.5 0.0086 16.1 2.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain NB-ARC PF00931.22 gi|433637342|ref|YP_007283102.1| - 0.0033 16.7 0.0 0.24 10.5 0.0 2.4 2 1 0 2 2 2 1 NB-ARC domain MMR_HSR1 PF01926.23 gi|433637342|ref|YP_007283102.1| - 0.0078 16.3 0.3 0.29 11.2 0.1 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase RuvB_N PF05496.12 gi|433637342|ref|YP_007283102.1| - 0.013 15.2 0.1 4.4 7.0 0.0 2.8 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|433637342|ref|YP_007283102.1| - 0.015 15.8 0.0 8.2 7.0 0.0 2.8 2 2 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|433637342|ref|YP_007283102.1| - 0.016 14.8 2.5 15 5.0 0.0 3.5 4 0 0 4 4 4 0 AAA domain AAA_28 PF13521.6 gi|433637342|ref|YP_007283102.1| - 0.036 14.3 1.7 5.9 7.1 0.0 3.4 3 1 0 3 3 3 0 AAA domain Fer4_7 PF12838.7 gi|433637342|ref|YP_007283102.1| - 0.048 14.3 10.8 0.1 13.2 10.8 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain SRP54 PF00448.22 gi|433637342|ref|YP_007283102.1| - 0.083 12.5 0.8 3.6 7.2 0.1 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 gi|433637342|ref|YP_007283102.1| - 0.096 12.7 0.2 19 5.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) Fer4_10 PF13237.6 gi|433637342|ref|YP_007283102.1| - 0.11 12.6 12.3 0.52 10.5 1.5 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain NTPase_1 PF03266.15 gi|433637342|ref|YP_007283102.1| - 0.14 12.0 3.0 10 6.0 0.0 3.2 4 0 0 4 4 4 0 NTPase AAA_30 PF13604.6 gi|433637342|ref|YP_007283102.1| - 0.16 11.6 0.7 8.4 6.1 0.0 2.9 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 gi|433637342|ref|YP_007283102.1| - 0.22 11.2 0.3 3.3 7.4 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein CLP1_P PF16575.5 gi|433637342|ref|YP_007283102.1| - 0.23 11.2 0.0 7 6.4 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF87 PF01935.17 gi|433637342|ref|YP_007283102.1| - 0.37 10.9 3.0 22 5.0 0.0 3.4 4 1 0 4 4 3 0 Helicase HerA, central domain Fer4_21 PF14697.6 gi|433637342|ref|YP_007283102.1| - 0.64 10.2 8.7 1.1 9.4 8.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433637342|ref|YP_007283102.1| - 0.78 10.0 10.6 1.6 9.0 10.6 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433637342|ref|YP_007283102.1| - 1.5 9.1 11.6 0.17 12.1 1.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Gly-zipper_YMGG PF13441.6 gi|433637343|ref|YP_007283103.1| - 7.9e-07 28.7 14.2 1.1e-06 28.2 14.2 1.2 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|433637343|ref|YP_007283103.1| - 4.7e-05 23.3 16.1 0.017 15.1 3.7 2.0 1 1 1 2 2 2 2 Glycine zipper Rick_17kDa_Anti PF05433.15 gi|433637343|ref|YP_007283103.1| - 5.9e-05 22.8 15.9 9.3e-05 22.2 15.9 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain DUF456 PF04306.13 gi|433637343|ref|YP_007283103.1| - 0.0031 17.8 1.1 0.0034 17.7 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) SNARE_assoc PF09335.11 gi|433637343|ref|YP_007283103.1| - 0.013 16.0 0.5 0.015 15.8 0.5 1.1 1 0 0 1 1 1 0 SNARE associated Golgi protein Bacteriocin_IIc PF10439.9 gi|433637343|ref|YP_007283103.1| - 0.047 13.8 8.3 0.07 13.3 8.3 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_OmpA PF13436.6 gi|433637343|ref|YP_007283103.1| - 0.08 12.7 18.7 0.19 11.5 18.6 1.7 1 1 0 1 1 1 0 Glycine-zipper domain TraT PF05818.12 gi|433637343|ref|YP_007283103.1| - 2.4 7.8 4.9 2.7 7.6 4.9 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DUF1269 PF06897.12 gi|433637343|ref|YP_007283103.1| - 9.2 6.6 8.7 16 5.8 8.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1269) ABC_tran PF00005.27 gi|433637344|ref|YP_007283104.1| - 7.1e-30 104.3 0.0 9.3e-30 103.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637344|ref|YP_007283104.1| - 8e-13 48.8 0.1 7.2e-09 35.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|433637344|ref|YP_007283104.1| - 0.00026 20.8 0.0 0.78 9.4 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_30 PF13604.6 gi|433637344|ref|YP_007283104.1| - 0.04 13.6 0.6 0.088 12.5 0.6 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|433637344|ref|YP_007283104.1| - 0.047 14.2 1.1 0.068 13.7 0.6 1.4 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|433637344|ref|YP_007283104.1| - 0.047 13.4 0.7 0.083 12.7 0.7 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|433637344|ref|YP_007283104.1| - 0.17 11.6 0.0 0.31 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|433637344|ref|YP_007283104.1| - 0.23 11.1 1.2 0.4 10.3 1.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ATP1G1_PLM_MAT8 PF02038.16 gi|433637345|ref|YP_007283105.1| - 0.097 12.1 2.2 0.43 10.0 2.2 2.1 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Peptidase_M54 PF07998.11 gi|433637346|ref|YP_007283106.1| - 1.7e-20 73.8 0.0 2.1e-20 73.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M54 Reprolysin_4 PF13583.6 gi|433637346|ref|YP_007283106.1| - 1.8e-05 24.5 0.1 2.1e-05 24.3 0.1 1.1 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M10 PF00413.24 gi|433637346|ref|YP_007283106.1| - 0.00017 21.5 0.0 0.00017 21.5 0.0 1.2 1 0 0 1 1 1 1 Matrixin Reprolysin_5 PF13688.6 gi|433637346|ref|YP_007283106.1| - 0.00029 21.0 0.0 0.00031 21.0 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_2 PF13574.6 gi|433637346|ref|YP_007283106.1| - 0.00036 20.5 0.3 0.00075 19.4 0.1 1.5 1 1 1 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_3 PF13582.6 gi|433637346|ref|YP_007283106.1| - 0.00069 20.1 0.0 0.00091 19.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|433637346|ref|YP_007283106.1| - 0.0015 17.5 0.0 0.002 17.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase M66 DUF4953 PF16313.5 gi|433637346|ref|YP_007283106.1| - 0.0024 17.1 0.0 0.0034 16.7 0.0 1.2 1 0 0 1 1 1 1 Met-zincin Zincin_1 PF06262.11 gi|433637346|ref|YP_007283106.1| - 0.072 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Zincin-like metallopeptidase Metallopep PF12044.8 gi|433637346|ref|YP_007283106.1| - 0.09 11.4 0.1 0.11 11.1 0.1 1.1 1 0 0 1 1 1 0 Putative peptidase family UPF0146 PF03686.13 gi|433637347|ref|YP_007283107.1| - 2.3e-32 111.6 0.1 2.8e-32 111.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) Hydrolase PF00702.26 gi|433637348|ref|YP_007283108.1| - 2.6e-11 44.2 2.3 5.2e-11 43.2 2.3 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|433637348|ref|YP_007283108.1| - 2.9e-08 34.0 0.0 8.8e-07 29.2 0.0 2.1 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433637348|ref|YP_007283108.1| - 0.00032 20.7 0.1 0.0012 18.9 0.1 2.0 1 1 0 1 1 1 1 HAD-hyrolase-like DAO PF01266.24 gi|433637350|ref|YP_007283110.1| - 7.6e-41 140.9 12.8 4e-40 138.5 12.8 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Rieske PF00355.26 gi|433637350|ref|YP_007283110.1| - 1.1e-15 57.3 0.0 2e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain NAD_binding_8 PF13450.6 gi|433637350|ref|YP_007283110.1| - 1e-08 35.3 1.0 1e-08 35.3 1.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|433637350|ref|YP_007283110.1| - 1.2e-08 34.6 0.5 6.1e-06 25.7 0.3 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433637350|ref|YP_007283110.1| - 5.6e-08 32.3 1.8 5.6e-08 32.3 1.8 1.6 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|433637350|ref|YP_007283110.1| - 9.5e-08 31.6 0.8 0.0026 17.1 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|433637350|ref|YP_007283110.1| - 6.5e-07 29.0 0.8 0.00024 20.5 0.3 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|433637350|ref|YP_007283110.1| - 2.7e-06 26.9 1.2 4.6e-06 26.1 1.2 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|433637350|ref|YP_007283110.1| - 3.2e-06 26.6 0.4 7.9e-06 25.3 0.4 1.6 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|433637350|ref|YP_007283110.1| - 9.1e-06 24.6 1.1 0.00072 18.4 0.9 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.7 gi|433637350|ref|YP_007283110.1| - 0.00012 21.6 2.4 0.00019 20.9 2.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|433637350|ref|YP_007283110.1| - 0.00012 22.1 5.4 0.38 10.7 0.2 3.7 4 0 0 4 4 4 2 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|433637350|ref|YP_007283110.1| - 0.0023 17.1 0.9 0.004 16.3 0.9 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein GIDA PF01134.22 gi|433637350|ref|YP_007283110.1| - 0.0037 16.4 0.4 0.0037 16.4 0.4 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|433637350|ref|YP_007283110.1| - 0.0045 17.5 0.6 0.0045 17.5 0.6 1.7 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|433637350|ref|YP_007283110.1| - 0.0052 16.1 1.0 0.0096 15.2 1.0 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|433637350|ref|YP_007283110.1| - 0.019 14.1 0.5 1.7 7.7 0.0 2.9 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.18 gi|433637350|ref|YP_007283110.1| - 0.022 14.7 0.4 0.038 13.9 0.4 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|433637350|ref|YP_007283110.1| - 0.052 12.4 0.5 0.079 11.8 0.5 1.2 1 0 0 1 1 1 0 Tryptophan halogenase ApbA PF02558.16 gi|433637350|ref|YP_007283110.1| - 0.055 13.1 0.8 0.095 12.3 0.3 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Rieske_2 PF13806.6 gi|433637350|ref|YP_007283110.1| - 0.13 12.2 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain UDPG_MGDP_dh_N PF03721.14 gi|433637350|ref|YP_007283110.1| - 0.14 11.7 0.5 0.23 11.0 0.5 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|433637350|ref|YP_007283110.1| - 0.17 12.2 1.7 0.24 11.7 0.3 1.9 2 0 0 2 2 2 0 TrkA-N domain Urate_ox_N PF06181.11 gi|433637351|ref|YP_007283111.1| - 0.23 10.8 5.1 0.38 10.0 0.2 2.1 1 1 1 2 2 2 0 Urate oxidase N-terminal Fe_dep_repr_C PF02742.15 gi|433637352|ref|YP_007283112.1| - 8.2e-24 83.5 1.0 1.4e-23 82.7 0.4 1.7 2 0 0 2 2 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|433637352|ref|YP_007283112.1| - 7.8e-17 61.2 0.3 1.9e-16 60.0 0.1 1.8 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|433637352|ref|YP_007283112.1| - 8.6e-10 38.5 0.3 2.1e-09 37.2 0.3 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain FeoA PF04023.14 gi|433637352|ref|YP_007283112.1| - 1.2e-09 38.2 0.8 2.7e-09 37.1 0.4 1.8 2 0 0 2 2 2 1 FeoA domain HTH_IclR PF09339.10 gi|433637352|ref|YP_007283112.1| - 3.5e-08 33.1 0.5 1.7e-07 31.0 0.2 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433637352|ref|YP_007283112.1| - 4e-08 33.0 0.0 1.2e-07 31.5 0.0 1.8 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|433637352|ref|YP_007283112.1| - 1.6e-07 31.2 0.1 3.9e-07 29.9 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433637352|ref|YP_007283112.1| - 4.2e-07 29.4 0.0 7.1e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|433637352|ref|YP_007283112.1| - 1.1e-05 25.2 0.1 5.5e-05 23.0 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|433637352|ref|YP_007283112.1| - 1.8e-05 25.0 0.3 5.7e-05 23.4 0.1 2.0 2 1 0 2 2 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|433637352|ref|YP_007283112.1| - 8.8e-05 22.4 0.2 0.00015 21.6 0.2 1.4 1 0 0 1 1 1 1 HTH domain Crp PF00325.20 gi|433637352|ref|YP_007283112.1| - 0.00011 21.8 0.9 0.00015 21.3 0.2 1.6 2 0 0 2 2 1 1 Bacterial regulatory proteins, crp family GntR PF00392.21 gi|433637352|ref|YP_007283112.1| - 0.00023 20.8 0.1 0.00055 19.5 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|433637352|ref|YP_007283112.1| - 0.00041 20.4 0.1 0.0086 16.1 0.1 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|433637352|ref|YP_007283112.1| - 0.00066 20.1 3.1 0.0014 19.1 0.1 2.7 3 0 0 3 3 3 1 Winged helix DNA-binding domain HTH_AsnC-type PF13404.6 gi|433637352|ref|YP_007283112.1| - 0.00066 19.5 0.1 0.0015 18.4 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r3 PF04539.16 gi|433637352|ref|YP_007283112.1| - 0.0024 17.9 0.4 0.0082 16.2 0.0 2.1 2 0 0 2 2 1 1 Sigma-70 region 3 FaeA PF04703.12 gi|433637352|ref|YP_007283112.1| - 0.0035 17.7 0.1 0.012 16.0 0.1 1.8 2 0 0 2 2 2 1 FaeA-like protein Put_DNA-bind_N PF06971.13 gi|433637352|ref|YP_007283112.1| - 0.0042 17.1 0.1 0.0097 15.9 0.1 1.6 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus DUF2250 PF10007.9 gi|433637352|ref|YP_007283112.1| - 0.007 16.5 0.3 0.036 14.2 0.1 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_5 PF01022.20 gi|433637352|ref|YP_007283112.1| - 0.0087 15.9 0.2 0.03 14.2 0.0 2.0 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family HTH_CodY PF08222.11 gi|433637352|ref|YP_007283112.1| - 0.0093 15.5 0.1 0.021 14.4 0.1 1.5 1 0 0 1 1 1 1 CodY helix-turn-helix domain HTH_23 PF13384.6 gi|433637352|ref|YP_007283112.1| - 0.01 15.6 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain LexA_DNA_bind PF01726.16 gi|433637352|ref|YP_007283112.1| - 0.012 15.4 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain FeoC PF09012.10 gi|433637352|ref|YP_007283112.1| - 0.024 14.7 0.0 0.055 13.5 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator YdaS_antitoxin PF15943.5 gi|433637352|ref|YP_007283112.1| - 0.031 14.1 0.0 0.099 12.5 0.0 1.9 2 0 0 2 2 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TFIIE_alpha PF02002.17 gi|433637352|ref|YP_007283112.1| - 0.032 14.1 0.0 0.069 13.0 0.0 1.7 1 1 0 1 1 1 0 TFIIE alpha subunit Sigma70_r4_2 PF08281.12 gi|433637352|ref|YP_007283112.1| - 0.036 13.7 0.1 0.076 12.7 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Mrr_N PF14338.6 gi|433637352|ref|YP_007283112.1| - 0.049 13.8 0.1 0.2 11.8 0.1 1.9 1 1 1 2 2 2 0 Mrr N-terminal domain HTH_47 PF16221.5 gi|433637352|ref|YP_007283112.1| - 0.055 13.0 0.1 0.16 11.6 0.0 1.8 2 0 0 2 2 2 0 winged helix-turn-helix HTH_29 PF13551.6 gi|433637352|ref|YP_007283112.1| - 0.07 13.2 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DUF4423 PF14394.6 gi|433637352|ref|YP_007283112.1| - 0.078 12.7 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_45 PF14947.6 gi|433637352|ref|YP_007283112.1| - 0.15 12.1 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix ABC-3 PF00950.17 gi|433637353|ref|YP_007283113.1| - 4.9e-58 196.7 42.0 5.8e-58 196.4 42.0 1.1 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|433637353|ref|YP_007283113.1| - 0.00084 18.4 37.1 0.00084 18.4 37.1 1.7 1 1 0 1 1 1 1 FecCD transport family DUF2407_C PF13373.6 gi|433637353|ref|YP_007283113.1| - 0.15 12.2 3.4 0.14 12.4 0.9 2.0 2 0 0 2 2 2 0 DUF2407 C-terminal domain Glycophorin_A PF01102.18 gi|433637353|ref|YP_007283113.1| - 7.1 6.9 8.4 12 6.2 0.1 3.4 3 1 0 3 3 3 0 Glycophorin A ABC_tran PF00005.27 gi|433637354|ref|YP_007283114.1| - 2.3e-31 109.2 0.0 3.1e-31 108.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637354|ref|YP_007283114.1| - 1.2e-11 45.0 0.1 8.2e-05 22.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637354|ref|YP_007283114.1| - 5.8e-05 22.6 0.0 0.01 15.3 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433637354|ref|YP_007283114.1| - 6.4e-05 22.6 0.0 0.00016 21.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433637354|ref|YP_007283114.1| - 0.00024 21.4 0.1 0.0042 17.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|433637354|ref|YP_007283114.1| - 0.0043 16.8 0.0 0.0054 16.5 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|433637354|ref|YP_007283114.1| - 0.0048 16.6 0.1 0.034 13.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433637354|ref|YP_007283114.1| - 0.005 17.2 0.2 0.013 15.9 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|433637354|ref|YP_007283114.1| - 0.0059 15.5 0.1 1.9 7.2 0.0 3.2 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|433637354|ref|YP_007283114.1| - 0.016 15.7 0.0 0.022 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|433637354|ref|YP_007283114.1| - 0.017 15.1 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 NTPase Spore_IV_A PF09547.10 gi|433637354|ref|YP_007283114.1| - 0.017 14.1 0.0 0.026 13.5 0.0 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) DUF3987 PF13148.6 gi|433637354|ref|YP_007283114.1| - 0.03 13.4 0.0 0.048 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) AAA_33 PF13671.6 gi|433637354|ref|YP_007283114.1| - 0.052 13.7 0.0 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|433637354|ref|YP_007283114.1| - 0.061 12.9 0.2 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|433637354|ref|YP_007283114.1| - 0.062 13.4 0.0 0.29 11.2 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.12 gi|433637354|ref|YP_007283114.1| - 0.084 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 NACHT domain DUF87 PF01935.17 gi|433637354|ref|YP_007283114.1| - 0.1 12.6 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain DUF1778 PF08681.11 gi|433637354|ref|YP_007283114.1| - 0.12 12.3 0.1 3.2 7.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1778) ATPase_2 PF01637.18 gi|433637354|ref|YP_007283114.1| - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea SbcCD_C PF13558.6 gi|433637354|ref|YP_007283114.1| - 0.21 11.9 2.3 1.3 9.3 0.4 2.6 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit ZnuA PF01297.17 gi|433637355|ref|YP_007283115.1| - 1.7e-43 148.9 0.1 2.2e-43 148.5 0.1 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Octopine_DH PF02317.17 gi|433637355|ref|YP_007283115.1| - 0.16 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain F420_oxidored PF03807.17 gi|433637357|ref|YP_007283117.1| - 3.7e-19 69.1 0.0 7.3e-19 68.2 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|433637357|ref|YP_007283117.1| - 7.8e-05 22.9 0.1 0.001 19.3 0.0 2.1 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 gi|433637357|ref|YP_007283117.1| - 0.0063 17.0 0.0 0.017 15.5 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|433637357|ref|YP_007283117.1| - 0.0068 16.3 0.0 0.014 15.3 0.0 1.6 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|433637357|ref|YP_007283117.1| - 0.0098 15.5 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DXP_reductoisom PF02670.16 gi|433637357|ref|YP_007283117.1| - 0.017 15.8 0.3 1.1 10.0 0.0 2.4 2 1 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase NAD_Gly3P_dh_N PF01210.23 gi|433637357|ref|YP_007283117.1| - 0.017 15.1 0.0 0.039 13.9 0.0 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFO_IDH_MocA PF01408.22 gi|433637357|ref|YP_007283117.1| - 0.049 14.5 0.0 0.11 13.3 0.0 1.5 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold PDH PF02153.17 gi|433637357|ref|YP_007283117.1| - 0.054 12.5 0.0 0.074 12.0 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase Shikimate_DH PF01488.20 gi|433637357|ref|YP_007283117.1| - 0.066 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_10 PF13460.6 gi|433637357|ref|YP_007283117.1| - 0.078 12.9 0.2 0.078 12.9 0.2 1.7 2 0 0 2 2 2 0 NAD(P)H-binding Thioredoxin PF00085.20 gi|433637358|ref|YP_007283118.1| - 1.7e-20 72.9 0.0 2e-20 72.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433637358|ref|YP_007283118.1| - 2e-07 31.4 0.2 7.3e-07 29.6 0.2 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|433637358|ref|YP_007283118.1| - 3e-05 24.3 0.0 0.027 14.8 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like TraF PF13728.6 gi|433637358|ref|YP_007283118.1| - 7.6e-05 22.6 0.0 8.1e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_3 PF13192.6 gi|433637358|ref|YP_007283118.1| - 0.0001 22.3 0.0 0.00013 22.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.6 gi|433637358|ref|YP_007283118.1| - 0.00081 19.2 0.0 0.00096 18.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 gi|433637358|ref|YP_007283118.1| - 0.001 18.8 0.2 0.04 13.6 0.0 2.0 1 1 1 2 2 2 2 Redoxin DUF836 PF05768.14 gi|433637358|ref|YP_007283118.1| - 0.0022 18.4 0.1 0.0027 18.1 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) AhpC-TSA PF00578.21 gi|433637358|ref|YP_007283118.1| - 0.006 16.5 0.1 0.0093 15.9 0.1 1.3 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_5 PF13743.6 gi|433637358|ref|YP_007283118.1| - 0.017 14.8 0.1 0.018 14.7 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin DSBA PF01323.20 gi|433637358|ref|YP_007283118.1| - 0.019 14.7 0.2 0.21 11.4 0.0 1.9 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Glutaredoxin PF00462.24 gi|433637358|ref|YP_007283118.1| - 0.025 14.8 0.4 0.061 13.6 0.1 1.8 1 1 1 2 2 2 0 Glutaredoxin DUF424 PF04242.13 gi|433637359|ref|YP_007283119.1| - 3.4e-27 94.5 0.1 3.9e-27 94.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) TPR_1 PF00515.28 gi|433637360|ref|YP_007283120.1| - 4.5e-21 73.7 4.6 8.2e-06 25.4 0.1 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|433637360|ref|YP_007283120.1| - 1.2e-19 68.8 12.8 4.2e-05 23.3 0.2 5.3 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|433637360|ref|YP_007283120.1| - 6.2e-15 55.6 10.7 6.7e-08 33.1 0.3 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|433637360|ref|YP_007283120.1| - 6.1e-13 47.9 1.1 0.53 10.6 0.1 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|433637360|ref|YP_007283120.1| - 2.8e-12 46.8 19.8 5.6e-05 23.4 1.2 4.6 2 2 1 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|433637360|ref|YP_007283120.1| - 8.9e-11 41.7 20.5 0.0018 18.9 0.6 5.3 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|433637360|ref|YP_007283120.1| - 4e-09 36.2 0.0 0.00061 20.0 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|433637360|ref|YP_007283120.1| - 4.2e-09 35.8 9.4 0.0013 18.6 0.0 5.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|433637360|ref|YP_007283120.1| - 2.7e-08 33.8 7.9 0.0068 16.5 0.1 4.2 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|433637360|ref|YP_007283120.1| - 1.5e-07 31.0 1.5 0.085 12.6 0.2 4.1 3 2 1 4 4 4 3 TPR repeat TPR_19 PF14559.6 gi|433637360|ref|YP_007283120.1| - 3.3e-07 30.7 5.9 0.002 18.6 0.0 4.5 2 2 1 4 4 4 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|433637360|ref|YP_007283120.1| - 1.6e-05 24.0 0.7 0.00038 19.5 0.2 2.3 1 1 0 1 1 1 1 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 gi|433637360|ref|YP_007283120.1| - 5.9e-05 23.2 0.1 0.017 15.4 0.0 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.14 gi|433637360|ref|YP_007283120.1| - 6.3e-05 23.2 21.3 0.056 14.1 1.6 5.4 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|433637360|ref|YP_007283120.1| - 0.00018 21.2 20.6 0.29 11.1 0.2 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|433637360|ref|YP_007283120.1| - 0.00024 21.5 5.2 2.3 9.1 0.1 4.7 5 0 0 5 5 5 2 Tetratricopeptide repeat MIT PF04212.18 gi|433637360|ref|YP_007283120.1| - 0.044 13.9 2.7 1 9.5 0.1 3.3 3 1 0 3 3 2 0 MIT (microtubule interacting and transport) domain LisH PF08513.11 gi|433637360|ref|YP_007283120.1| - 0.071 13.1 0.2 1.8 8.7 0.0 2.9 3 0 0 3 3 3 0 LisH ANAPC5 PF12862.7 gi|433637360|ref|YP_007283120.1| - 0.11 12.6 3.1 1.5 9.0 0.1 3.3 2 2 2 4 4 4 0 Anaphase-promoting complex subunit 5 DUF3856 PF12968.7 gi|433637360|ref|YP_007283120.1| - 0.36 10.9 11.6 1.2 9.2 0.7 3.8 1 1 2 3 3 3 0 Domain of Unknown Function (DUF3856) Acetyltransf_11 PF13720.6 gi|433637360|ref|YP_007283120.1| - 0.52 10.8 4.0 0.21 12.1 0.5 2.1 3 0 0 3 3 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FAM176 PF14851.6 gi|433637360|ref|YP_007283120.1| - 0.56 9.9 20.3 0.11 12.1 1.7 3.1 2 1 1 3 3 3 0 FAM176 family LigT_PEase PF02834.16 gi|433637361|ref|YP_007283121.1| - 6.8e-22 77.5 0.0 8.1e-13 48.4 0.0 2.6 3 0 0 3 3 3 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|433637361|ref|YP_007283121.1| - 1.9e-17 63.6 0.0 2.4e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|433637361|ref|YP_007283121.1| - 8.4e-07 29.1 0.0 9.3e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain TPR_10 PF13374.6 gi|433637361|ref|YP_007283121.1| - 0.066 13.1 0.0 4.7 7.2 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat HVSL PF09749.9 gi|433637361|ref|YP_007283121.1| - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein HEV_ORF1 PF02444.16 gi|433637362|ref|YP_007283122.1| - 0.096 13.3 0.3 0.24 12.0 0.3 1.6 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) Ribosomal_L39 PF00832.20 gi|433637363|ref|YP_007283123.1| - 1.3e-20 72.7 8.0 1.5e-20 72.5 8.0 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.19 gi|433637364|ref|YP_007283124.1| - 2e-10 40.8 0.1 2.4e-10 40.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Rap1a PF18602.1 gi|433637364|ref|YP_007283124.1| - 0.12 12.7 0.1 1.8 8.9 0.1 2.1 2 0 0 2 2 2 0 Rap1a immunity proteins eIF-6 PF01912.18 gi|433637365|ref|YP_007283125.1| - 3.2e-70 235.5 0.1 3.8e-70 235.3 0.1 1.1 1 0 0 1 1 1 1 eIF-6 family Prefoldin PF02996.17 gi|433637366|ref|YP_007283126.1| - 2.5e-26 91.9 4.9 2.5e-26 91.9 4.9 1.7 1 1 1 2 2 2 1 Prefoldin subunit ZapB PF06005.12 gi|433637366|ref|YP_007283126.1| - 1.1e-06 29.0 19.8 0.00039 20.8 6.3 2.2 2 0 0 2 2 2 2 Cell division protein ZapB Prefoldin_2 PF01920.20 gi|433637366|ref|YP_007283126.1| - 2.5e-06 27.4 16.7 0.00011 22.1 4.4 2.5 1 1 1 2 2 2 2 Prefoldin subunit ORF6C PF10552.9 gi|433637366|ref|YP_007283126.1| - 8.1e-06 25.9 3.8 0.0031 17.6 0.4 2.2 2 0 0 2 2 2 2 ORF6C domain APG6_N PF17675.1 gi|433637366|ref|YP_007283126.1| - 2.7e-05 24.7 21.1 0.0054 17.3 6.5 2.1 2 0 0 2 2 2 2 Apg6 coiled-coil region Spc24 PF08286.11 gi|433637366|ref|YP_007283126.1| - 9.9e-05 22.5 7.3 0.082 13.2 1.9 2.3 2 0 0 2 2 2 2 Spc24 subunit of Ndc80 T3SSipB PF16535.5 gi|433637366|ref|YP_007283126.1| - 0.0001 22.8 14.5 0.0042 17.6 5.5 2.1 2 0 0 2 2 2 2 Type III cell invasion protein SipB NPV_P10 PF05531.12 gi|433637366|ref|YP_007283126.1| - 0.00015 22.2 17.7 0.026 15.0 5.4 2.7 2 1 0 2 2 2 2 Nucleopolyhedrovirus P10 protein MscS_porin PF12795.7 gi|433637366|ref|YP_007283126.1| - 0.00018 21.1 20.9 0.00036 20.2 5.4 2.2 2 0 0 2 2 2 1 Mechanosensitive ion channel porin domain ATG16 PF08614.11 gi|433637366|ref|YP_007283126.1| - 0.00019 21.7 11.1 0.0096 16.2 1.1 2.1 2 0 0 2 2 2 2 Autophagy protein 16 (ATG16) Laminin_II PF06009.12 gi|433637366|ref|YP_007283126.1| - 0.00019 21.4 8.3 0.024 14.7 1.6 2.2 2 0 0 2 2 2 2 Laminin Domain II DUF812 PF05667.11 gi|433637366|ref|YP_007283126.1| - 0.00022 20.3 15.8 0.0051 15.8 4.5 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF812) DUF4201 PF13870.6 gi|433637366|ref|YP_007283126.1| - 0.00025 20.8 6.0 0.053 13.3 1.9 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4201) DHR10 PF18595.1 gi|433637366|ref|YP_007283126.1| - 0.00065 19.7 15.9 0.009 16.1 3.8 2.2 2 0 0 2 2 2 1 Designed helical repeat protein 10 domain GAS PF13851.6 gi|433637366|ref|YP_007283126.1| - 0.00072 19.0 9.4 0.1 11.9 2.0 2.1 2 0 0 2 2 2 2 Growth-arrest specific micro-tubule binding YabA PF06156.13 gi|433637366|ref|YP_007283126.1| - 0.00074 20.1 7.8 0.076 13.6 1.2 2.2 2 0 0 2 2 2 2 Initiation control protein YabA Sec34 PF04136.15 gi|433637366|ref|YP_007283126.1| - 0.0011 18.8 13.1 0.029 14.2 2.9 2.1 2 0 0 2 2 2 2 Sec34-like family PI3K_P85_iSH2 PF16454.5 gi|433637366|ref|YP_007283126.1| - 0.0013 18.4 6.3 0.094 12.3 0.2 2.1 2 0 0 2 2 2 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain AAA_13 PF13166.6 gi|433637366|ref|YP_007283126.1| - 0.0013 17.5 10.9 0.0087 14.8 1.6 2.0 2 0 0 2 2 2 1 AAA domain UPF0242 PF06785.11 gi|433637366|ref|YP_007283126.1| - 0.0014 18.8 15.9 0.0031 17.6 4.3 2.1 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus TSC22 PF01166.18 gi|433637366|ref|YP_007283126.1| - 0.0021 18.3 0.2 0.0021 18.3 0.2 3.1 3 0 0 3 3 2 1 TSC-22/dip/bun family Tropomyosin_1 PF12718.7 gi|433637366|ref|YP_007283126.1| - 0.0021 18.2 17.9 0.15 12.2 5.0 2.1 2 0 0 2 2 2 2 Tropomyosin like SKA2 PF16740.5 gi|433637366|ref|YP_007283126.1| - 0.0023 17.7 9.5 0.1 12.4 0.9 2.2 2 0 0 2 2 2 2 Spindle and kinetochore-associated protein 2 Lzipper-MIP1 PF14389.6 gi|433637366|ref|YP_007283126.1| - 0.0023 18.2 1.5 0.0023 18.2 1.5 2.3 2 0 0 2 2 2 1 Leucine-zipper of ternary complex factor MIP1 Syntaxin_2 PF14523.6 gi|433637366|ref|YP_007283126.1| - 0.0025 18.2 5.4 0.058 13.8 0.4 2.2 2 0 0 2 2 2 1 Syntaxin-like protein Spc7 PF08317.11 gi|433637366|ref|YP_007283126.1| - 0.0034 16.3 17.7 0.048 12.5 4.2 2.1 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF4407 PF14362.6 gi|433637366|ref|YP_007283126.1| - 0.0039 16.6 12.3 0.0095 15.3 12.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 gi|433637366|ref|YP_007283126.1| - 0.0046 17.2 17.6 0.079 13.3 2.9 2.8 2 1 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tektin PF03148.14 gi|433637366|ref|YP_007283126.1| - 0.0046 15.8 11.1 0.028 13.2 1.6 2.1 2 0 0 2 2 2 1 Tektin family Uds1 PF15456.6 gi|433637366|ref|YP_007283126.1| - 0.0048 17.1 8.3 0.016 15.4 8.3 1.9 1 1 0 1 1 1 1 Up-regulated During Septation DUF4618 PF15397.6 gi|433637366|ref|YP_007283126.1| - 0.0055 16.2 11.2 0.075 12.4 2.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4618) IFT57 PF10498.9 gi|433637366|ref|YP_007283126.1| - 0.0058 15.6 11.5 0.018 14.0 3.3 2.1 2 0 0 2 2 2 1 Intra-flagellar transport protein 57 AAA_lid_9 PF17871.1 gi|433637366|ref|YP_007283126.1| - 0.0059 16.5 9.1 0.013 15.5 1.2 2.2 2 0 0 2 2 2 1 AAA lid domain Phage_GP20 PF06810.11 gi|433637366|ref|YP_007283126.1| - 0.006 16.4 12.9 0.055 13.3 5.2 2.1 2 0 0 2 2 2 1 Phage minor structural protein GP20 DUF16 PF01519.16 gi|433637366|ref|YP_007283126.1| - 0.0061 17.0 13.9 0.14 12.6 2.2 2.2 2 0 0 2 2 2 1 Protein of unknown function DUF16 DUF4515 PF14988.6 gi|433637366|ref|YP_007283126.1| - 0.0062 16.4 13.0 0.023 14.5 2.5 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4515) CENP-F_leu_zip PF10473.9 gi|433637366|ref|YP_007283126.1| - 0.0062 16.6 13.1 0.14 12.2 2.8 2.2 2 0 0 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 gi|433637366|ref|YP_007283126.1| - 0.0064 16.9 13.2 0.17 12.3 2.4 3.1 3 0 0 3 3 2 2 Flagella accessory protein C (FlaC) DUF4600 PF15372.6 gi|433637366|ref|YP_007283126.1| - 0.0065 16.9 3.5 0.075 13.5 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4600) DUF1664 PF07889.12 gi|433637366|ref|YP_007283126.1| - 0.0068 16.4 13.1 0.21 11.6 1.4 2.5 2 1 1 3 3 2 2 Protein of unknown function (DUF1664) COG6 PF06419.11 gi|433637366|ref|YP_007283126.1| - 0.0076 14.5 10.4 0.12 10.5 2.3 2.0 2 0 0 2 2 2 2 Conserved oligomeric complex COG6 Spectrin PF00435.21 gi|433637366|ref|YP_007283126.1| - 0.0076 16.7 13.4 0.061 13.8 2.2 2.2 2 0 0 2 2 2 1 Spectrin repeat ATP-synt_D PF01813.17 gi|433637366|ref|YP_007283126.1| - 0.0078 16.1 3.3 0.088 12.6 0.7 2.1 2 0 0 2 2 2 1 ATP synthase subunit D HalX PF08663.10 gi|433637366|ref|YP_007283126.1| - 0.0091 16.3 3.4 0.0091 16.3 3.4 3.2 2 1 1 3 3 3 1 HalX domain Nmad5 PF18757.1 gi|433637366|ref|YP_007283126.1| - 0.01 16.1 1.1 0.014 15.6 1.1 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 5 DUF4988 PF16378.5 gi|433637366|ref|YP_007283126.1| - 0.011 15.4 4.7 1.1 8.9 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function GPS2_interact PF15784.5 gi|433637366|ref|YP_007283126.1| - 0.011 16.1 1.5 0.011 16.1 1.5 2.2 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain XhlA PF10779.9 gi|433637366|ref|YP_007283126.1| - 0.011 15.9 10.3 0.047 13.9 1.0 2.6 2 1 0 2 2 2 0 Haemolysin XhlA COG2 PF06148.11 gi|433637366|ref|YP_007283126.1| - 0.011 15.8 8.9 0.39 10.8 1.3 2.2 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 EzrA PF06160.12 gi|433637366|ref|YP_007283126.1| - 0.014 13.7 12.8 0.073 11.2 3.1 2.1 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Mod_r PF07200.13 gi|433637366|ref|YP_007283126.1| - 0.014 15.5 9.0 0.23 11.5 0.8 2.1 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein NBD94 PF16830.5 gi|433637366|ref|YP_007283126.1| - 0.014 15.8 4.3 1.7 9.1 0.3 2.3 2 0 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH PRKG1_interact PF15898.5 gi|433637366|ref|YP_007283126.1| - 0.017 16.0 8.2 0.97 10.4 1.2 2.2 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain COG5 PF10392.9 gi|433637366|ref|YP_007283126.1| - 0.018 15.2 4.3 1.9 8.7 0.7 2.2 2 0 0 2 2 2 0 Golgi transport complex subunit 5 DUF4337 PF14235.6 gi|433637366|ref|YP_007283126.1| - 0.018 15.2 2.3 0.018 15.2 2.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) DUF5082 PF16888.5 gi|433637366|ref|YP_007283126.1| - 0.018 15.3 16.9 0.11 12.8 3.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Seryl_tRNA_N PF02403.22 gi|433637366|ref|YP_007283126.1| - 0.019 15.2 11.9 0.3 11.3 2.3 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain CASP_C PF08172.12 gi|433637366|ref|YP_007283126.1| - 0.02 14.2 8.4 0.03 13.7 8.4 1.2 1 0 0 1 1 1 0 CASP C terminal PRTP PF01366.18 gi|433637366|ref|YP_007283126.1| - 0.021 12.9 2.3 0.025 12.6 2.3 1.1 1 0 0 1 1 1 0 Herpesvirus processing and transport protein HemX PF04375.14 gi|433637366|ref|YP_007283126.1| - 0.021 14.1 17.5 0.027 13.7 4.1 2.0 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Olduvai PF06758.13 gi|433637366|ref|YP_007283126.1| - 0.023 14.9 1.5 0.054 13.8 1.5 1.7 1 0 0 1 1 1 0 Olduvai domain EMP24_GP25L PF01105.24 gi|433637366|ref|YP_007283126.1| - 0.023 14.6 10.9 0.61 10.0 2.0 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Fib_alpha PF08702.10 gi|433637366|ref|YP_007283126.1| - 0.025 14.8 11.6 5.5 7.2 11.6 2.2 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Alpha-2-MRAP_C PF06401.11 gi|433637366|ref|YP_007283126.1| - 0.029 14.3 3.4 0.2 11.6 0.2 2.0 2 0 0 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain DUF4200 PF13863.6 gi|433637366|ref|YP_007283126.1| - 0.03 14.7 14.5 0.21 12.0 4.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) DUF724 PF05266.14 gi|433637366|ref|YP_007283126.1| - 0.03 14.1 8.7 0.27 11.0 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 gi|433637366|ref|YP_007283126.1| - 0.031 13.6 23.3 0.23 10.7 8.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) SAS4 PF15460.6 gi|433637366|ref|YP_007283126.1| - 0.031 14.4 6.0 0.12 12.4 0.7 2.3 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 Cytochrom_C_2 PF01322.20 gi|433637366|ref|YP_007283126.1| - 0.036 15.0 5.2 0.061 14.2 0.6 2.1 1 1 1 2 2 2 0 Cytochrome C' Filament PF00038.21 gi|433637366|ref|YP_007283126.1| - 0.038 13.6 12.8 0.41 10.2 1.8 2.1 2 0 0 2 2 2 0 Intermediate filament protein TPR_MLP1_2 PF07926.12 gi|433637366|ref|YP_007283126.1| - 0.04 14.0 19.5 0.39 10.8 6.7 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein CENP-H PF05837.12 gi|433637366|ref|YP_007283126.1| - 0.043 14.2 11.3 0.16 12.4 2.4 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Vps51 PF08700.11 gi|433637366|ref|YP_007283126.1| - 0.045 13.8 7.6 0.57 10.3 1.8 2.8 2 1 1 3 3 2 0 Vps51/Vps67 Sipho_Gp157 PF05565.11 gi|433637366|ref|YP_007283126.1| - 0.045 13.8 11.9 0.027 14.5 3.8 2.1 2 0 0 2 2 2 0 Siphovirus Gp157 DUF3829 PF12889.7 gi|433637366|ref|YP_007283126.1| - 0.046 13.2 3.0 0.84 9.1 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3829) FTA4 PF13093.6 gi|433637366|ref|YP_007283126.1| - 0.047 13.6 5.0 0.066 13.1 5.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 GrpE PF01025.19 gi|433637366|ref|YP_007283126.1| - 0.047 13.4 11.1 0.69 9.6 3.4 2.2 2 0 0 2 2 2 0 GrpE DUF948 PF06103.11 gi|433637366|ref|YP_007283126.1| - 0.049 13.9 8.7 0.9 9.8 1.1 2.4 3 0 0 3 3 2 0 Bacterial protein of unknown function (DUF948) bZIP_1 PF00170.21 gi|433637366|ref|YP_007283126.1| - 0.049 13.7 8.4 0.94 9.6 1.6 2.8 2 1 0 2 2 2 0 bZIP transcription factor YvrJ PF12841.7 gi|433637366|ref|YP_007283126.1| - 0.05 13.1 3.8 1.7 8.2 0.2 2.5 2 0 0 2 2 2 0 YvrJ protein family Synaptobrevin PF00957.21 gi|433637366|ref|YP_007283126.1| - 0.05 13.4 13.3 0.086 12.6 3.2 3.1 2 1 1 3 3 3 0 Synaptobrevin ADIP PF11559.8 gi|433637366|ref|YP_007283126.1| - 0.051 13.7 11.9 0.051 13.6 1.6 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding K-box PF01486.17 gi|433637366|ref|YP_007283126.1| - 0.058 13.6 8.5 1.4 9.1 1.4 2.6 2 0 0 2 2 2 0 K-box region Syntaxin-6_N PF09177.11 gi|433637366|ref|YP_007283126.1| - 0.059 13.9 7.6 0.9 10.1 0.7 2.4 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Jnk-SapK_ap_N PF09744.9 gi|433637366|ref|YP_007283126.1| - 0.06 13.6 12.4 0.1 12.8 2.6 2.1 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 FlxA PF14282.6 gi|433637366|ref|YP_007283126.1| - 0.069 13.1 25.4 0.2 11.6 10.3 2.2 2 0 0 2 2 2 0 FlxA-like protein Ax_dynein_light PF10211.9 gi|433637366|ref|YP_007283126.1| - 0.078 12.9 12.3 0.22 11.5 3.4 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain V_ATPase_I PF01496.19 gi|433637366|ref|YP_007283126.1| - 0.082 10.8 7.5 0.18 9.7 0.5 2.0 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Med9 PF07544.13 gi|433637366|ref|YP_007283126.1| - 0.083 13.0 11.3 0.16 12.1 2.4 2.3 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Nnf1 PF03980.14 gi|433637366|ref|YP_007283126.1| - 0.085 13.2 12.9 0.96 9.9 2.9 2.3 2 0 0 2 2 2 0 Nnf1 YlqD PF11068.8 gi|433637366|ref|YP_007283126.1| - 0.086 13.2 15.8 0.39 11.1 4.2 2.5 2 0 0 2 2 2 0 YlqD protein HBM PF16591.5 gi|433637366|ref|YP_007283126.1| - 0.089 12.2 13.2 0.22 10.9 4.2 2.1 2 0 0 2 2 2 0 Helical bimodular sensor domain DUF4763 PF15960.5 gi|433637366|ref|YP_007283126.1| - 0.09 12.1 9.4 0.49 9.7 1.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4763) Baculo_PEP_C PF04513.12 gi|433637366|ref|YP_007283126.1| - 0.093 12.8 11.6 0.71 9.9 1.2 2.3 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Not3 PF04065.15 gi|433637366|ref|YP_007283126.1| - 0.098 12.1 7.8 0.43 10.0 0.9 2.1 2 0 0 2 2 2 0 Not1 N-terminal domain, CCR4-Not complex component TMCO5 PF14992.6 gi|433637366|ref|YP_007283126.1| - 0.1 12.1 6.9 0.44 10.1 0.7 2.0 2 0 0 2 2 2 0 TMCO5 family Allexi_40kDa PF05549.11 gi|433637366|ref|YP_007283126.1| - 0.1 12.1 3.8 1.5 8.3 0.2 2.1 2 0 0 2 2 2 0 Allexivirus 40kDa protein ABC_tran_CTD PF16326.5 gi|433637366|ref|YP_007283126.1| - 0.11 12.8 21.4 1 9.6 5.2 2.7 2 1 0 2 2 2 0 ABC transporter C-terminal domain CorA PF01544.18 gi|433637366|ref|YP_007283126.1| - 0.11 11.8 9.5 0.77 9.0 1.7 2.1 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein SOGA PF11365.8 gi|433637366|ref|YP_007283126.1| - 0.11 13.7 6.1 1.5 10.0 1.5 2.3 2 0 0 2 2 2 0 Protein SOGA DUF3552 PF12072.8 gi|433637366|ref|YP_007283126.1| - 0.11 11.9 17.3 0.098 12.1 6.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) GCN5L1 PF06320.13 gi|433637366|ref|YP_007283126.1| - 0.11 12.6 9.4 0.12 12.5 2.2 2.3 2 0 0 2 2 2 0 GCN5-like protein 1 (GCN5L1) Occludin_ELL PF07303.13 gi|433637366|ref|YP_007283126.1| - 0.11 13.2 8.7 3.5 8.4 2.7 2.3 2 1 0 2 2 2 0 Occludin homology domain Plk4_PB2 PF18409.1 gi|433637366|ref|YP_007283126.1| - 0.12 13.1 1.9 11 6.7 0.2 2.1 2 0 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 Cluap1 PF10234.9 gi|433637366|ref|YP_007283126.1| - 0.12 11.7 12.6 0.36 10.2 2.7 2.0 2 0 0 2 2 2 0 Clusterin-associated protein-1 Taxilin PF09728.9 gi|433637366|ref|YP_007283126.1| - 0.13 11.4 10.3 0.14 11.3 3.2 2.0 2 0 0 2 2 2 0 Myosin-like coiled-coil protein Cob_adeno_trans PF01923.18 gi|433637366|ref|YP_007283126.1| - 0.14 12.3 6.9 0.21 11.7 0.7 2.3 1 1 1 2 2 2 0 Cobalamin adenosyltransferase DUF2205 PF10224.9 gi|433637366|ref|YP_007283126.1| - 0.14 12.2 18.6 1.5 8.9 7.0 2.8 2 1 0 2 2 2 0 Short coiled-coil protein Fzo_mitofusin PF04799.13 gi|433637366|ref|YP_007283126.1| - 0.14 11.7 8.3 0.66 9.5 1.0 2.2 2 0 0 2 2 2 0 fzo-like conserved region DUF4446 PF14584.6 gi|433637366|ref|YP_007283126.1| - 0.14 12.1 6.8 2.4 8.1 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Uso1_p115_C PF04871.13 gi|433637366|ref|YP_007283126.1| - 0.16 12.4 16.6 0.045 14.1 10.1 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region SHE3 PF17078.5 gi|433637366|ref|YP_007283126.1| - 0.16 11.7 9.1 1.1 8.9 2.3 2.1 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 CdvA PF18822.1 gi|433637366|ref|YP_007283126.1| - 0.16 11.8 10.2 2.1 8.2 0.3 2.9 2 2 0 2 2 2 0 CdvA-like coiled-coil domain Cep57_MT_bd PF06657.13 gi|433637366|ref|YP_007283126.1| - 0.16 12.4 15.7 1.1 9.7 4.8 2.6 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF2730 PF10805.8 gi|433637366|ref|YP_007283126.1| - 0.17 12.0 8.4 2 8.5 0.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) Rho_Binding PF08912.11 gi|433637366|ref|YP_007283126.1| - 0.17 12.7 12.1 0.93 10.4 2.1 2.4 2 0 0 2 2 2 0 Rho Binding FliD_C PF07195.12 gi|433637366|ref|YP_007283126.1| - 0.18 11.2 5.7 0.096 12.1 0.6 2.0 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus TSNAXIP1_N PF15739.5 gi|433637366|ref|YP_007283126.1| - 0.18 12.2 9.8 0.54 10.6 0.7 2.2 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus Clusterin PF01093.17 gi|433637366|ref|YP_007283126.1| - 0.19 10.7 6.4 0.3 10.1 0.5 2.0 2 0 0 2 2 2 0 Clusterin CC2-LZ PF16516.5 gi|433637366|ref|YP_007283126.1| - 0.19 12.1 12.8 0.33 11.3 2.0 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Nsp1_C PF05064.13 gi|433637366|ref|YP_007283126.1| - 0.2 11.5 16.9 0.83 9.5 5.0 2.4 2 1 0 2 2 2 0 Nsp1-like C-terminal region SKA1 PF07160.12 gi|433637366|ref|YP_007283126.1| - 0.2 11.4 10.3 0.3 10.9 1.8 2.1 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 JIP_LZII PF16471.5 gi|433637366|ref|YP_007283126.1| - 0.21 11.8 13.9 0.43 10.8 2.8 2.9 2 1 1 3 3 3 0 JNK-interacting protein leucine zipper II TMF_DNA_bd PF12329.8 gi|433637366|ref|YP_007283126.1| - 0.22 11.6 15.6 0.42 10.6 3.4 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Dor1 PF04124.12 gi|433637366|ref|YP_007283126.1| - 0.22 10.2 5.7 1.6 7.3 0.6 2.1 2 0 0 2 2 2 0 Dor1-like family MCU PF04678.13 gi|433637366|ref|YP_007283126.1| - 0.22 11.6 8.4 0.065 13.3 1.0 2.1 1 1 1 2 2 2 0 Mitochondrial calcium uniporter GvpK PF05121.12 gi|433637366|ref|YP_007283126.1| - 0.23 11.5 12.1 1.1 9.3 1.1 2.3 2 0 0 2 2 2 0 Gas vesicle protein K MAD PF05557.13 gi|433637366|ref|YP_007283126.1| - 0.24 9.7 11.4 0.14 10.5 2.2 2.0 2 0 0 2 2 2 0 Mitotic checkpoint protein Lebercilin PF15619.6 gi|433637366|ref|YP_007283126.1| - 0.26 10.9 12.6 1 9.0 3.5 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Tmemb_cc2 PF10267.9 gi|433637366|ref|YP_007283126.1| - 0.27 10.3 9.3 0.59 9.2 1.3 2.1 2 0 0 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein End3 PF12761.7 gi|433637366|ref|YP_007283126.1| - 0.27 11.4 9.3 0.9 9.7 1.6 2.2 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 Flagellar_rod PF05149.12 gi|433637366|ref|YP_007283126.1| - 0.28 10.6 11.2 0.84 9.0 2.4 2.1 2 0 0 2 2 2 0 Paraflagellar rod protein bZIP_2 PF07716.15 gi|433637366|ref|YP_007283126.1| - 0.29 11.3 17.2 2.1 8.5 3.8 2.6 2 1 0 2 2 2 0 Basic region leucine zipper DivIC PF04977.15 gi|433637366|ref|YP_007283126.1| - 0.3 10.9 22.8 0.28 11.0 5.2 2.9 2 1 0 2 2 2 0 Septum formation initiator TraF_2 PF13729.6 gi|433637366|ref|YP_007283126.1| - 0.3 10.4 11.7 2 7.7 5.3 2.5 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein ERM PF00769.19 gi|433637366|ref|YP_007283126.1| - 0.31 10.8 18.2 0.71 9.6 7.0 2.1 2 0 0 2 2 2 0 Ezrin/radixin/moesin family bZIP_Maf PF03131.17 gi|433637366|ref|YP_007283126.1| - 0.32 11.6 10.1 3.4 8.3 1.8 2.4 2 0 0 2 2 2 0 bZIP Maf transcription factor DASH_Dam1 PF08653.10 gi|433637366|ref|YP_007283126.1| - 0.32 10.8 7.5 6.3 6.7 0.8 3.3 2 1 1 3 3 3 0 DASH complex subunit Dam1 E2F_CC-MB PF16421.5 gi|433637366|ref|YP_007283126.1| - 0.32 11.4 15.5 0.38 11.2 0.9 2.9 2 1 0 2 2 2 0 E2F transcription factor CC-MB domain BRE1 PF08647.11 gi|433637366|ref|YP_007283126.1| - 0.33 11.1 12.2 1.6 8.8 1.9 2.4 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase YkyA PF10368.9 gi|433637366|ref|YP_007283126.1| - 0.34 10.6 13.4 1.1 8.9 2.9 2.1 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein FUSC PF04632.12 gi|433637366|ref|YP_007283126.1| - 0.36 9.3 2.4 0.54 8.7 2.4 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family RmuC PF02646.16 gi|433637366|ref|YP_007283126.1| - 0.36 9.9 11.6 1.4 8.0 3.2 2.1 2 0 0 2 2 2 0 RmuC family Med4 PF10018.9 gi|433637366|ref|YP_007283126.1| - 0.37 10.4 12.1 0.46 10.1 1.2 2.3 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 LPP PF04728.13 gi|433637366|ref|YP_007283126.1| - 0.4 11.1 21.0 1.4 9.4 3.6 3.0 2 1 1 3 3 3 0 Lipoprotein leucine-zipper HAUS-augmin3 PF14932.6 gi|433637366|ref|YP_007283126.1| - 0.42 10.1 13.0 0.39 10.2 2.1 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 MtrG PF04210.13 gi|433637366|ref|YP_007283126.1| - 0.43 10.5 3.5 6 6.8 0.2 2.5 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G ISG65-75 PF11727.8 gi|433637366|ref|YP_007283126.1| - 0.46 9.7 5.0 1.7 7.8 0.5 2.0 2 0 0 2 2 2 0 Invariant surface glycoprotein TMF_TATA_bd PF12325.8 gi|433637366|ref|YP_007283126.1| - 0.46 10.7 17.1 0.87 9.8 3.5 2.3 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding PspA_IM30 PF04012.12 gi|433637366|ref|YP_007283126.1| - 0.53 9.8 17.6 0.8 9.2 6.6 2.2 2 0 0 2 2 2 0 PspA/IM30 family FapA PF03961.13 gi|433637366|ref|YP_007283126.1| - 0.53 8.8 10.4 2 7.0 2.0 2.0 1 1 0 2 2 2 0 Flagellar Assembly Protein A Csm1_N PF18504.1 gi|433637366|ref|YP_007283126.1| - 0.54 10.6 16.5 2.3 8.6 3.5 2.5 2 0 0 2 2 2 0 Csm1 N-terminal domain Sec8_exocyst PF04048.14 gi|433637366|ref|YP_007283126.1| - 0.56 10.1 7.1 0.68 9.8 1.9 2.1 2 0 0 2 2 2 0 Sec8 exocyst complex component specific domain Prominin PF05478.11 gi|433637366|ref|YP_007283126.1| - 0.6 8.0 7.7 2.1 6.2 0.7 2.0 2 0 0 2 2 2 0 Prominin AKNA PF12443.8 gi|433637366|ref|YP_007283126.1| - 0.63 10.7 10.6 5 7.8 2.2 2.3 2 0 0 2 2 2 0 AT-hook-containing transcription factor SlyX PF04102.12 gi|433637366|ref|YP_007283126.1| - 0.63 10.7 23.6 1.4 9.6 3.6 2.9 3 1 0 3 3 2 0 SlyX USP8_interact PF08941.10 gi|433637366|ref|YP_007283126.1| - 0.72 9.6 5.7 2.8 7.7 0.2 2.1 2 0 0 2 2 2 0 USP8 interacting Tup_N PF08581.10 gi|433637366|ref|YP_007283126.1| - 0.72 10.2 11.5 0.9 9.9 2.2 2.6 3 0 0 3 3 2 0 Tup N-terminal DUF4140 PF13600.6 gi|433637366|ref|YP_007283126.1| - 0.72 10.3 19.2 0.94 10.0 3.2 2.8 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2968 PF11180.8 gi|433637366|ref|YP_007283126.1| - 0.72 9.5 18.7 2 8.0 5.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) Atg14 PF10186.9 gi|433637366|ref|YP_007283126.1| - 0.72 8.9 9.0 0.52 9.3 1.4 2.0 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 PHM7_cyt PF14703.6 gi|433637366|ref|YP_007283126.1| - 0.72 10.1 7.0 1.6 8.9 1.0 2.2 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Golgin_A5 PF09787.9 gi|433637366|ref|YP_007283126.1| - 0.72 9.3 16.9 0.79 9.1 5.0 2.1 2 0 0 2 2 2 0 Golgin subfamily A member 5 Tweety PF04906.13 gi|433637366|ref|YP_007283126.1| - 0.73 8.4 3.7 0.76 8.4 0.2 1.9 2 0 0 2 2 2 0 Tweety RPW8 PF05659.11 gi|433637366|ref|YP_007283126.1| - 0.73 9.5 5.0 8.1 6.1 0.8 2.5 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 zf-C4H2 PF10146.9 gi|433637366|ref|YP_007283126.1| - 0.78 10.0 8.4 3.6 7.8 1.9 2.1 2 0 0 2 2 2 0 Zinc finger-containing protein UPF0449 PF15136.6 gi|433637366|ref|YP_007283126.1| - 0.8 10.2 9.8 1.1 9.8 2.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0449 KASH_CCD PF14662.6 gi|433637366|ref|YP_007283126.1| - 0.83 9.5 15.5 0.46 10.3 4.9 2.2 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH CLZ PF16526.5 gi|433637366|ref|YP_007283126.1| - 0.87 10.0 14.8 1.8 9.0 2.0 2.8 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4164 PF13747.6 gi|433637366|ref|YP_007283126.1| - 0.91 9.8 14.5 4 7.8 4.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) FH2 PF02181.23 gi|433637366|ref|YP_007283126.1| - 0.92 8.6 6.6 1.7 7.7 1.0 2.1 2 0 0 2 2 2 0 Formin Homology 2 Domain RasGAP_C PF03836.15 gi|433637366|ref|YP_007283126.1| - 0.96 9.6 8.5 4.4 7.4 0.4 2.2 2 0 0 2 2 2 0 RasGAP C-terminus KfrA_N PF11740.8 gi|433637366|ref|YP_007283126.1| - 0.96 10.1 19.5 0.57 10.9 5.6 2.5 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term FliJ PF02050.16 gi|433637366|ref|YP_007283126.1| - 0.99 9.6 21.0 0.21 11.8 4.1 2.4 2 1 0 2 2 2 0 Flagellar FliJ protein Troponin PF00992.20 gi|433637366|ref|YP_007283126.1| - 1 9.6 10.6 0.24 11.7 1.4 2.1 2 0 0 2 2 2 0 Troponin kleA_kleC PF17383.2 gi|433637366|ref|YP_007283126.1| - 1.1 9.7 5.9 1.1 9.7 0.7 2.3 2 0 0 2 2 2 0 Uncharacterized KorC regulated protein A Fez1 PF06818.15 gi|433637366|ref|YP_007283126.1| - 1.1 9.6 12.8 7.6 6.9 12.8 1.9 1 1 0 1 1 1 0 Fez1 Snapin_Pallidin PF14712.6 gi|433637366|ref|YP_007283126.1| - 1.2 9.6 17.8 0.7 10.3 1.9 2.8 2 1 1 3 3 3 0 Snapin/Pallidin CCDC-167 PF15188.6 gi|433637366|ref|YP_007283126.1| - 1.2 9.5 8.4 8.1 6.9 1.1 2.6 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 APG17 PF04108.12 gi|433637366|ref|YP_007283126.1| - 1.2 8.1 10.1 3.4 6.7 2.1 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 TolA_bind_tri PF16331.5 gi|433637366|ref|YP_007283126.1| - 1.6 8.8 27.1 0.11 12.6 6.1 3.0 2 1 1 3 3 3 0 TolA binding protein trimerisation Swi5 PF07061.11 gi|433637366|ref|YP_007283126.1| - 1.6 8.8 16.6 1.3 9.2 3.3 2.6 2 1 0 2 2 2 0 Swi5 HlyD_2 PF12700.7 gi|433637366|ref|YP_007283126.1| - 1.7 7.3 12.2 1.8 7.2 2.6 2.1 1 1 1 2 2 2 0 HlyD family secretion protein DegS PF05384.11 gi|433637366|ref|YP_007283126.1| - 1.7 8.1 12.3 0.81 9.2 2.1 2.4 2 0 0 2 2 2 0 Sensor protein DegS zf-C4pol PF14260.6 gi|433637366|ref|YP_007283126.1| - 1.8 9.1 3.6 24 5.5 0.2 2.2 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta DivIVA PF05103.13 gi|433637366|ref|YP_007283126.1| - 1.9 8.6 16.0 3.3 7.8 3.8 2.5 2 1 0 2 2 2 0 DivIVA protein LidA_Long_CC PF18641.1 gi|433637366|ref|YP_007283126.1| - 1.9 8.5 12.3 3 7.9 2.6 2.3 2 0 0 2 2 2 0 LidA long coiled-coil domain MAP65_ASE1 PF03999.12 gi|433637366|ref|YP_007283126.1| - 1.9 7.1 9.4 3.5 6.2 1.1 2.0 2 0 0 2 2 2 0 Microtubule associated protein (MAP65/ASE1 family) DUF1192 PF06698.11 gi|433637366|ref|YP_007283126.1| - 1.9 8.6 12.8 6.1 7.0 1.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) DUF2802 PF10975.8 gi|433637366|ref|YP_007283126.1| - 2 8.6 18.4 0.74 10.0 2.3 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2802) GARP PF16731.5 gi|433637366|ref|YP_007283126.1| - 2.4 7.8 10.2 1 9.0 1.6 2.2 2 0 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma Mt_ATP-synt_D PF05873.12 gi|433637366|ref|YP_007283126.1| - 2.5 7.9 5.2 4.9 7.0 0.7 2.1 2 0 0 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) THOC7 PF05615.13 gi|433637366|ref|YP_007283126.1| - 2.5 8.4 15.7 1.4 9.2 2.5 2.3 2 0 0 2 2 2 0 Tho complex subunit 7 Lge1 PF11488.8 gi|433637366|ref|YP_007283126.1| - 2.7 8.3 13.6 5.8 7.2 2.9 2.4 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 ROS_MUCR PF05443.11 gi|433637366|ref|YP_007283126.1| - 2.7 8.0 4.8 14 5.7 0.3 2.1 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein Vps53_N PF04100.12 gi|433637366|ref|YP_007283126.1| - 2.7 6.8 7.8 4 6.3 0.8 2.1 2 0 0 2 2 2 0 Vps53-like, N-terminal GIT_CC PF16559.5 gi|433637366|ref|YP_007283126.1| - 2.7 7.9 14.6 3.3 7.6 5.4 2.4 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor LRRFIP PF09738.9 gi|433637366|ref|YP_007283126.1| - 2.8 7.4 15.3 14 5.0 15.3 1.8 1 1 0 1 1 1 0 LRRFIP family zf-CpG_bind_C PF12269.8 gi|433637366|ref|YP_007283126.1| - 2.9 7.6 6.2 6.9 6.4 0.4 2.1 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain Dzip-like_N PF13815.6 gi|433637366|ref|YP_007283126.1| - 3 7.8 11.8 3.7 7.5 2.6 2.2 2 0 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal MCPsignal PF00015.21 gi|433637366|ref|YP_007283126.1| - 3.1 7.6 12.9 5 6.9 2.7 2.2 2 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Exonuc_VII_L PF02601.15 gi|433637366|ref|YP_007283126.1| - 3.2 7.3 8.6 13 5.2 8.6 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF2203 PF09969.9 gi|433637366|ref|YP_007283126.1| - 3.2 8.5 12.0 1.8e+03 -0.4 12.1 2.4 1 1 0 1 1 0 0 Uncharacterized conserved protein (DUF2203) TMPIT PF07851.13 gi|433637366|ref|YP_007283126.1| - 3.4 6.8 11.1 4.4 6.4 1.1 2.0 1 1 0 2 2 2 0 TMPIT-like protein Fungal_TACC PF12709.7 gi|433637366|ref|YP_007283126.1| - 3.4 8.2 12.4 3 8.3 1.9 2.4 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DP PF08781.10 gi|433637366|ref|YP_007283126.1| - 3.5 7.5 9.5 4.5 7.2 1.6 2.2 2 0 0 2 2 2 0 Transcription factor DP Dynamitin PF04912.14 gi|433637366|ref|YP_007283126.1| - 3.6 6.8 19.1 2.4 7.4 5.5 2.0 1 1 1 2 2 2 0 Dynamitin DUF2381 PF09544.10 gi|433637366|ref|YP_007283126.1| - 3.7 7.0 8.8 7.5 6.0 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2381) CENP-Q PF13094.6 gi|433637366|ref|YP_007283126.1| - 3.9 7.6 12.4 7.6 6.7 2.4 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF2570 PF10828.8 gi|433637366|ref|YP_007283126.1| - 4.2 7.2 16.2 3.6 7.4 5.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) MutS_IV PF05190.18 gi|433637366|ref|YP_007283126.1| - 4.3 7.7 6.5 17 5.8 1.1 2.5 2 0 0 2 2 2 0 MutS family domain IV DUF4795 PF16043.5 gi|433637366|ref|YP_007283126.1| - 4.3 6.9 17.5 8e+02 -0.5 18.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) RRP36 PF06102.12 gi|433637366|ref|YP_007283126.1| - 5.7 6.9 9.7 2.3 8.1 1.4 2.1 2 0 0 2 2 2 0 rRNA biogenesis protein RRP36 Cnn_1N PF07989.11 gi|433637366|ref|YP_007283126.1| - 5.7 7.2 13.6 2.3 8.5 3.8 2.5 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 DASH_Dad2 PF08654.10 gi|433637366|ref|YP_007283126.1| - 6.3 7.3 13.3 2.3 8.7 1.4 2.4 2 1 0 2 2 2 0 DASH complex subunit Dad2 MerR-DNA-bind PF09278.11 gi|433637366|ref|YP_007283126.1| - 8.4 7.0 21.9 1.8 9.2 3.2 3.5 2 2 1 3 3 2 0 MerR, DNA binding BORCS7 PF16088.5 gi|433637366|ref|YP_007283126.1| - 8.7 6.7 10.4 15 5.9 1.8 2.3 2 0 0 2 2 2 0 BLOC-1-related complex sub-unit 7 DUF3782 PF12644.7 gi|433637366|ref|YP_007283126.1| - 8.8 6.6 10.0 21 5.3 1.0 2.9 2 1 1 3 3 2 0 Protein of unknown function (DUF3782) OmpH PF03938.14 gi|433637366|ref|YP_007283126.1| - 9.1 6.6 26.5 2.1 8.7 6.8 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Fmp27_WPPW PF10359.9 gi|433637366|ref|YP_007283126.1| - 9.5 4.9 12.3 9.4 5.0 4.2 2.0 1 1 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain SRP54 PF00448.22 gi|433637367|ref|YP_007283127.1| - 5.3e-68 228.5 0.2 7.6e-68 228.0 0.2 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|433637367|ref|YP_007283127.1| - 4.2e-10 39.7 0.1 1.3e-09 38.1 0.1 1.9 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain APS_kinase PF01583.20 gi|433637367|ref|YP_007283127.1| - 1.3e-05 25.1 0.0 2.2e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_22 PF13401.6 gi|433637367|ref|YP_007283127.1| - 7.7e-05 23.0 0.0 0.0011 19.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|433637367|ref|YP_007283127.1| - 0.00014 21.6 0.1 0.017 14.8 0.0 2.7 2 1 1 3 3 3 1 Thymidylate kinase Zeta_toxin PF06414.12 gi|433637367|ref|YP_007283127.1| - 0.00016 21.0 0.1 0.00027 20.3 0.1 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 gi|433637367|ref|YP_007283127.1| - 0.00066 19.4 2.3 0.0055 16.5 2.3 2.3 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|433637367|ref|YP_007283127.1| - 0.0021 18.3 1.4 0.0081 16.4 0.5 2.5 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|433637367|ref|YP_007283127.1| - 0.0043 17.5 1.1 0.007 16.8 0.1 1.9 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 gi|433637367|ref|YP_007283127.1| - 0.0064 16.6 0.1 0.012 15.6 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.15 gi|433637367|ref|YP_007283127.1| - 0.01 15.7 0.2 0.13 12.2 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_16 PF13191.6 gi|433637367|ref|YP_007283127.1| - 0.012 16.0 1.7 0.016 15.6 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain KTI12 PF08433.10 gi|433637367|ref|YP_007283127.1| - 0.026 14.0 0.0 0.046 13.2 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 cobW PF02492.19 gi|433637367|ref|YP_007283127.1| - 0.031 13.8 0.1 0.053 13.1 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|433637367|ref|YP_007283127.1| - 0.046 13.9 0.2 0.11 12.6 0.2 1.7 1 1 0 1 1 1 0 AAA domain 6PF2K PF01591.18 gi|433637367|ref|YP_007283127.1| - 0.062 12.6 0.0 0.098 12.0 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase PPK2 PF03976.14 gi|433637367|ref|YP_007283127.1| - 0.069 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) AAA_24 PF13479.6 gi|433637367|ref|YP_007283127.1| - 0.081 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AIF-MLS PF14962.6 gi|433637367|ref|YP_007283127.1| - 0.93 9.4 13.6 2.7 7.9 13.6 1.7 1 0 0 1 1 1 0 Mitochondria Localisation Sequence PCNA_N PF00705.18 gi|433637369|ref|YP_007283129.1| - 1.5e-09 37.6 0.0 2.1e-08 33.9 0.0 2.0 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|433637369|ref|YP_007283129.1| - 0.00063 19.9 0.0 0.0062 16.7 0.0 2.1 1 1 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain RNase_II_C_S1 PF18614.1 gi|433637369|ref|YP_007283129.1| - 0.042 13.8 1.3 0.47 10.4 0.3 2.8 3 0 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain DNA_pol3_beta PF00712.19 gi|433637369|ref|YP_007283129.1| - 0.16 12.1 0.0 2.1 8.5 0.0 2.2 2 0 0 2 2 2 0 DNA polymerase III beta subunit, N-terminal domain HIT PF01230.23 gi|433637370|ref|YP_007283130.1| - 2.2e-15 57.2 0.0 2.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|433637370|ref|YP_007283130.1| - 1.3e-08 35.3 0.0 1.6e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|433637370|ref|YP_007283130.1| - 0.051 13.5 0.2 0.073 12.9 0.2 1.4 1 1 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 SRP54 PF00448.22 gi|433637372|ref|YP_007283132.1| - 1.2e-64 217.6 0.1 1.8e-64 217.0 0.1 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|433637372|ref|YP_007283132.1| - 1.3e-27 96.3 2.7 1.3e-27 96.3 2.7 2.8 2 1 1 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.19 gi|433637372|ref|YP_007283132.1| - 1.6e-14 53.8 2.9 2e-14 53.6 0.1 2.6 3 0 0 3 3 3 1 SRP54-type protein, helical bundle domain cobW PF02492.19 gi|433637372|ref|YP_007283132.1| - 0.00043 19.9 0.5 0.0076 15.9 0.5 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|433637372|ref|YP_007283132.1| - 0.0026 17.8 0.0 0.0056 16.7 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|433637372|ref|YP_007283132.1| - 0.013 14.8 0.0 0.03 13.6 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_24 PF13479.6 gi|433637372|ref|YP_007283132.1| - 0.015 15.0 0.0 0.048 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain ArsA_ATPase PF02374.15 gi|433637372|ref|YP_007283132.1| - 0.025 13.8 5.3 0.048 12.8 0.1 2.9 3 0 0 3 3 3 0 Anion-transporting ATPase VirC1 PF07015.11 gi|433637372|ref|YP_007283132.1| - 0.025 13.9 0.1 0.45 9.8 0.0 2.2 2 0 0 2 2 2 0 VirC1 protein APS_kinase PF01583.20 gi|433637372|ref|YP_007283132.1| - 0.035 14.0 0.0 0.069 13.0 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_33 PF13671.6 gi|433637372|ref|YP_007283132.1| - 0.046 13.9 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|433637372|ref|YP_007283132.1| - 0.058 13.7 0.1 0.31 11.3 0.1 2.3 2 1 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|433637372|ref|YP_007283132.1| - 0.11 11.9 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|433637372|ref|YP_007283132.1| - 0.11 12.9 0.0 0.32 11.3 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain PRK PF00485.18 gi|433637372|ref|YP_007283132.1| - 0.12 12.2 0.0 0.29 10.9 0.0 1.7 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family KTI12 PF08433.10 gi|433637372|ref|YP_007283132.1| - 0.18 11.2 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Hpt PF01627.23 gi|433637372|ref|YP_007283132.1| - 0.73 10.1 3.3 0.88 9.9 0.2 2.8 3 0 0 3 3 3 0 Hpt domain AAA_25 PF13481.6 gi|433637372|ref|YP_007283132.1| - 0.77 9.3 4.7 6 6.4 4.7 2.4 1 1 0 1 1 1 0 AAA domain HTH_20 PF12840.7 gi|433637374|ref|YP_007283134.1| - 5e-05 23.3 0.1 0.00036 20.5 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.6 gi|433637374|ref|YP_007283134.1| - 1.6 8.7 9.1 14 5.7 0.8 3.6 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 gi|433637374|ref|YP_007283134.1| - 2.5 8.1 8.3 1.4 8.8 0.4 2.6 3 0 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn-ribbon_8 PF09723.10 gi|433637374|ref|YP_007283134.1| - 5.2 7.3 10.7 6.2 7.0 0.5 3.4 3 0 0 3 3 3 0 Zinc ribbon domain RNA_binding PF01877.17 gi|433637375|ref|YP_007283135.1| - 7.8e-08 32.6 0.4 8.3e-07 29.3 0.4 2.1 1 1 0 1 1 1 1 RNA binding Peptidase_C21 PF05381.12 gi|433637375|ref|YP_007283135.1| - 0.16 12.3 0.0 0.45 10.9 0.0 1.8 1 1 1 2 2 2 0 Tymovirus endopeptidase AAA_17 PF13207.6 gi|433637376|ref|YP_007283136.1| - 5.3e-19 69.0 0.1 8.9e-19 68.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|433637376|ref|YP_007283136.1| - 1.7e-10 41.6 0.0 2.2e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|433637376|ref|YP_007283136.1| - 7e-05 23.0 0.0 0.00011 22.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|433637376|ref|YP_007283136.1| - 0.00011 22.3 0.0 0.00015 21.9 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase PEP-utilizers PF00391.23 gi|433637376|ref|YP_007283136.1| - 0.019 14.7 0.3 0.049 13.4 0.3 1.8 1 1 0 1 1 1 0 PEP-utilising enzyme, mobile domain DUF2171 PF09939.9 gi|433637377|ref|YP_007283137.1| - 0.0024 18.1 4.1 0.0081 16.4 4.1 1.8 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2171) PRC PF05239.16 gi|433637377|ref|YP_007283137.1| - 0.0066 16.5 0.7 0.011 15.8 0.7 1.5 1 1 0 1 1 1 1 PRC-barrel domain KHA PF11834.8 gi|433637377|ref|YP_007283137.1| - 0.075 13.1 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 KHA, dimerisation domain of potassium ion channel Syndecan PF01034.20 gi|433637377|ref|YP_007283137.1| - 0.27 11.2 0.4 0.41 10.6 0.4 1.3 1 0 0 1 1 1 0 Syndecan domain Creatininase PF02633.14 gi|433637378|ref|YP_007283138.1| - 4e-64 216.4 0.7 4.7e-64 216.1 0.7 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase Pilin_N PF07790.11 gi|433637379|ref|YP_007283139.1| - 2.3e-15 57.3 5.4 2.3e-15 57.3 5.4 1.7 1 1 1 2 2 2 1 Archaeal Type IV pilin, N-terminal DUF4307 PF14155.6 gi|433637379|ref|YP_007283139.1| - 0.055 13.3 0.4 0.1 12.5 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF3995 PF13160.6 gi|433637379|ref|YP_007283139.1| - 0.11 12.9 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) ArsP_1 PF03773.13 gi|433637380|ref|YP_007283140.1| - 4e-59 200.2 13.2 5.1e-59 199.8 13.2 1.1 1 0 0 1 1 1 1 Predicted permease YHS PF04945.13 gi|433637380|ref|YP_007283140.1| - 5e-19 68.1 4.1 2.3e-13 50.0 0.9 2.3 2 0 0 2 2 2 2 YHS domain zf-FCS PF06467.14 gi|433637380|ref|YP_007283140.1| - 7.5e-05 22.6 3.4 0.056 13.4 0.2 2.3 2 0 0 2 2 2 2 MYM-type Zinc finger with FCS sequence motif zf-HIT PF04438.16 gi|433637380|ref|YP_007283140.1| - 0.0078 16.1 0.3 0.086 12.7 0.1 2.2 2 0 0 2 2 2 1 HIT zinc finger RPAP2_Rtr1 PF04181.13 gi|433637380|ref|YP_007283140.1| - 0.11 12.8 0.6 12 6.4 0.1 2.3 2 0 0 2 2 2 0 Rtr1/RPAP2 family Herpes_LMP1 PF05297.11 gi|433637380|ref|YP_007283140.1| - 0.39 9.9 0.0 0.39 9.9 0.0 2.2 2 1 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) VATC PF18716.1 gi|433637380|ref|YP_007283140.1| - 0.94 9.4 5.1 12 5.8 0.2 2.4 2 0 0 2 2 2 0 Vms1-associating treble clef domain SHOCT PF09851.9 gi|433637381|ref|YP_007283141.1| - 1.5e-07 30.9 4.1 2.3e-07 30.3 4.1 1.2 1 0 0 1 1 1 1 Short C-terminal domain DUF1707 PF08044.11 gi|433637381|ref|YP_007283141.1| - 5.2e-05 23.2 0.8 8.5e-05 22.5 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) E1-E2_ATPase PF00122.20 gi|433637382|ref|YP_007283142.1| - 4.1e-49 166.6 1.5 4.1e-49 166.6 1.5 3.2 3 1 0 3 3 3 2 E1-E2 ATPase Hydrolase PF00702.26 gi|433637382|ref|YP_007283142.1| - 1.4e-41 143.1 7.1 1.4e-41 143.1 7.1 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|433637382|ref|YP_007283142.1| - 0.00036 20.4 0.1 0.00088 19.1 0.1 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433637382|ref|YP_007283142.1| - 0.008 16.6 0.2 0.049 14.0 0.1 2.3 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Zip PF02535.22 gi|433637382|ref|YP_007283142.1| - 0.089 12.0 4.0 4 6.6 0.0 3.5 3 1 1 4 4 4 0 ZIP Zinc transporter Abhydrolase_1 PF00561.20 gi|433637383|ref|YP_007283143.1| - 6.8e-10 39.0 0.1 1.3e-09 38.1 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|433637383|ref|YP_007283143.1| - 2.5e-08 34.8 10.8 3.4e-08 34.3 10.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family SPC12 PF06645.13 gi|433637385|ref|YP_007283145.1| - 0.038 14.1 0.5 0.044 13.9 0.5 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) PglL_A PF15864.5 gi|433637386|ref|YP_007283146.1| - 0.43 10.3 3.8 0.88 9.4 3.8 1.5 1 0 0 1 1 1 0 Protein glycosylation ligase CHRD PF07452.12 gi|433637387|ref|YP_007283147.1| - 2.1e-28 99.6 1.1 2.1e-28 99.6 1.1 1.6 2 0 0 2 2 2 1 CHRD domain Peripla_BP_6 PF13458.6 gi|433637388|ref|YP_007283148.1| - 9.8e-33 114.2 8.4 1.2e-32 113.9 8.4 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 gi|433637388|ref|YP_007283148.1| - 9.1e-15 54.6 0.0 1.1e-14 54.3 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 gi|433637388|ref|YP_007283148.1| - 9.6e-07 28.1 0.0 3.8e-05 22.8 0.1 2.2 2 0 0 2 2 2 1 Periplasmic binding protein domain EAP30 PF04157.16 gi|433637388|ref|YP_007283148.1| - 0.014 14.7 0.0 0.31 10.3 0.0 2.2 2 0 0 2 2 2 0 EAP30/Vps36 family TAT_signal PF10518.9 gi|433637388|ref|YP_007283148.1| - 0.16 11.9 7.4 0.45 10.4 7.4 1.9 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|433637388|ref|YP_007283148.1| - 0.57 9.6 3.6 1.3 8.4 3.6 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BPD_transp_2 PF02653.16 gi|433637389|ref|YP_007283149.1| - 8.7e-40 136.6 39.6 1.1e-39 136.3 39.6 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF4131 PF13567.6 gi|433637389|ref|YP_007283149.1| - 0.071 12.7 8.4 0.074 12.7 1.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) BPD_transp_2 PF02653.16 gi|433637390|ref|YP_007283150.1| - 3.2e-36 124.9 39.0 4.2e-36 124.5 39.0 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Coa1 PF08695.10 gi|433637390|ref|YP_007283150.1| - 0.15 11.8 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 ABC_tran PF00005.27 gi|433637391|ref|YP_007283151.1| - 1.5e-29 103.3 0.0 1.9e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 gi|433637391|ref|YP_007283151.1| - 1.3e-09 37.7 0.0 2.8e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 gi|433637391|ref|YP_007283151.1| - 3e-09 37.1 2.7 0.00078 19.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|433637391|ref|YP_007283151.1| - 7.3e-05 23.3 0.2 0.00017 22.2 0.2 1.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433637391|ref|YP_007283151.1| - 0.0001 21.8 0.6 0.0012 18.3 0.6 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433637391|ref|YP_007283151.1| - 0.0076 16.0 0.1 0.015 15.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433637391|ref|YP_007283151.1| - 0.0094 16.3 0.2 0.015 15.7 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|433637391|ref|YP_007283151.1| - 0.02 14.6 0.2 0.032 13.9 0.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|433637391|ref|YP_007283151.1| - 0.023 14.4 0.0 0.045 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|433637391|ref|YP_007283151.1| - 0.061 13.7 0.1 0.51 10.8 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|433637391|ref|YP_007283151.1| - 0.088 12.9 0.2 0.42 10.7 0.2 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|433637391|ref|YP_007283151.1| - 0.11 11.7 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 gi|433637392|ref|YP_007283152.1| - 2.9e-31 108.8 0.0 4e-31 108.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637392|ref|YP_007283152.1| - 4.4e-12 46.4 0.3 2e-05 24.6 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|433637392|ref|YP_007283152.1| - 4.7e-06 26.5 0.6 6.3e-06 26.0 0.6 1.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433637392|ref|YP_007283152.1| - 2.5e-05 23.8 0.2 0.022 14.2 0.2 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433637392|ref|YP_007283152.1| - 0.001 18.8 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|433637392|ref|YP_007283152.1| - 0.0018 17.9 0.0 0.0029 17.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|433637392|ref|YP_007283152.1| - 0.0018 18.8 0.0 0.0026 18.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain gp12-short_mid PF09089.10 gi|433637392|ref|YP_007283152.1| - 0.03 14.5 1.2 0.041 14.0 0.1 1.8 3 0 0 3 3 2 0 Phage short tail fibre protein gp12, middle domain AAA_22 PF13401.6 gi|433637392|ref|YP_007283152.1| - 0.044 14.1 0.1 0.15 12.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain MukB PF04310.12 gi|433637392|ref|YP_007283152.1| - 0.046 13.5 0.2 0.32 10.8 0.1 2.0 2 0 0 2 2 2 0 MukB N-terminal Zeta_toxin PF06414.12 gi|433637392|ref|YP_007283152.1| - 0.058 12.7 0.2 0.25 10.6 0.2 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_15 PF13175.6 gi|433637392|ref|YP_007283152.1| - 0.067 12.9 0.0 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 gi|433637392|ref|YP_007283152.1| - 0.078 13.2 0.5 1.6 9.1 0.5 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.6 gi|433637392|ref|YP_007283152.1| - 0.083 13.3 0.2 0.13 12.7 0.2 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|433637392|ref|YP_007283152.1| - 0.12 12.9 0.2 1.6 9.3 0.0 2.5 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 gi|433637392|ref|YP_007283152.1| - 0.13 12.7 0.3 0.47 10.9 0.3 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|433637392|ref|YP_007283152.1| - 0.15 12.2 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase OCD_Mu_crystall PF02423.15 gi|433637393|ref|YP_007283153.1| - 4.9e-58 196.5 5.7 7e-58 196.1 5.7 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|433637393|ref|YP_007283153.1| - 0.0025 17.9 0.0 0.0045 17.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase CarboxypepD_reg PF13620.6 gi|433637393|ref|YP_007283153.1| - 0.0045 17.2 0.9 0.0045 17.2 0.9 3.0 3 1 0 3 3 3 1 Carboxypeptidase regulatory-like domain DAO PF01266.24 gi|433637394|ref|YP_007283154.1| - 2.3e-78 264.3 6.5 2.6e-78 264.1 6.5 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|433637394|ref|YP_007283154.1| - 5e-12 45.6 0.5 4.1e-05 23.0 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|433637394|ref|YP_007283154.1| - 9.9e-09 35.0 4.8 4.4e-08 32.9 4.9 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|433637394|ref|YP_007283154.1| - 6.1e-08 31.8 0.7 0.0053 15.5 0.9 2.2 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|433637394|ref|YP_007283154.1| - 7.1e-08 31.9 10.3 2.8e-07 30.0 10.2 1.8 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|433637394|ref|YP_007283154.1| - 3.3e-07 30.4 1.1 8.9e-07 29.1 0.6 2.1 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|433637394|ref|YP_007283154.1| - 1.8e-06 28.4 2.5 0.014 15.9 1.1 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|433637394|ref|YP_007283154.1| - 7.2e-06 25.5 1.2 0.0022 17.3 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|433637394|ref|YP_007283154.1| - 9.9e-05 21.7 7.6 0.00057 19.2 1.9 2.3 1 1 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.14 gi|433637394|ref|YP_007283154.1| - 0.0001 21.3 0.7 0.11 11.3 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Thi4 PF01946.17 gi|433637394|ref|YP_007283154.1| - 0.00011 21.6 0.5 0.001 18.4 0.2 2.1 2 0 0 2 2 2 1 Thi4 family NAD_binding_7 PF13241.6 gi|433637394|ref|YP_007283154.1| - 0.00062 20.2 0.0 0.0011 19.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox_3 PF13738.6 gi|433637394|ref|YP_007283154.1| - 0.0025 17.1 0.1 0.16 11.2 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433637394|ref|YP_007283154.1| - 0.0074 15.4 2.0 0.0074 15.4 2.0 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|433637394|ref|YP_007283154.1| - 0.015 14.6 2.4 0.027 13.7 2.4 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain adh_short_C2 PF13561.6 gi|433637394|ref|YP_007283154.1| - 0.033 13.7 0.2 0.29 10.7 0.0 2.1 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase NAD_binding_9 PF13454.6 gi|433637394|ref|YP_007283154.1| - 0.037 14.0 5.6 0.71 9.9 0.4 2.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|433637394|ref|YP_007283154.1| - 0.041 13.5 0.3 0.12 12.0 0.3 1.7 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|433637394|ref|YP_007283154.1| - 0.042 13.7 0.3 0.067 13.1 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|433637394|ref|YP_007283154.1| - 0.05 13.2 1.4 0.077 12.6 0.8 1.7 2 0 0 2 2 1 0 Ketopantoate reductase PanE/ApbA Lycopene_cycl PF05834.12 gi|433637394|ref|YP_007283154.1| - 0.069 12.2 0.2 0.18 10.8 0.1 1.8 2 0 0 2 2 2 0 Lycopene cyclase protein UPF0175 PF03683.13 gi|433637394|ref|YP_007283154.1| - 0.27 11.0 0.6 0.77 9.5 0.1 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0175) Usp PF00582.26 gi|433637395|ref|YP_007283155.1| - 7e-28 97.9 0.1 8.1e-28 97.7 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF1508 PF07411.12 gi|433637396|ref|YP_007283156.1| - 9.3e-23 79.8 0.6 1.3e-22 79.4 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1508) Na_Ca_ex PF01699.24 gi|433637397|ref|YP_007283157.1| - 1.7e-17 63.8 26.1 2.7e-11 43.7 7.1 2.8 2 1 1 3 3 3 2 Sodium/calcium exchanger protein DUF5325 PF17259.2 gi|433637397|ref|YP_007283157.1| - 0.2 11.6 0.1 0.2 11.6 0.1 4.2 5 1 0 5 5 5 0 Family of unknown function (DUF5325) Aldedh PF00171.22 gi|433637398|ref|YP_007283158.1| - 5.7e-147 490.0 0.0 6.4e-147 489.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family E1-E2_ATPase PF00122.20 gi|433637399|ref|YP_007283159.1| - 1.1e-51 174.9 1.4 2.6e-51 173.7 1.4 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433637399|ref|YP_007283159.1| - 2.8e-40 138.9 5.0 5.2e-40 138.0 5.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433637399|ref|YP_007283159.1| - 4.9e-12 46.1 0.6 2.1e-11 44.1 0.0 2.4 3 0 0 3 3 3 1 Heavy-metal-associated domain HAD PF12710.7 gi|433637399|ref|YP_007283159.1| - 0.0032 17.9 0.2 0.01 16.3 0.2 1.9 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|433637399|ref|YP_007283159.1| - 0.059 13.1 2.3 0.17 11.6 1.3 2.0 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Peptidase_M29 PF02073.15 gi|433637403|ref|YP_007283163.1| - 2.5e-67 227.5 0.2 2.8e-67 227.3 0.2 1.0 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) TrkA_C PF02080.21 gi|433637403|ref|YP_007283163.1| - 0.11 12.3 0.1 0.26 11.2 0.1 1.6 1 0 0 1 1 1 0 TrkA-C domain Beta_elim_lyase PF01212.21 gi|433637404|ref|YP_007283164.1| - 4.7e-83 278.8 0.9 5.8e-83 278.5 0.9 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|433637404|ref|YP_007283164.1| - 0.00044 19.7 0.1 0.0039 16.5 0.0 2.4 3 1 1 4 4 4 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_3 PF00202.21 gi|433637404|ref|YP_007283164.1| - 0.087 11.5 0.0 1.4 7.5 0.0 2.1 2 0 0 2 2 2 0 Aminotransferase class-III DUF4083 PF13314.6 gi|433637405|ref|YP_007283165.1| - 0.17 11.8 4.8 0.22 11.5 4.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Metallophos_2 PF12850.7 gi|433637406|ref|YP_007283166.1| - 8.9e-25 87.8 0.5 1e-24 87.6 0.5 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433637406|ref|YP_007283166.1| - 4.3e-08 33.9 0.5 0.0086 16.6 0.1 2.2 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Cation_efflux PF01545.21 gi|433637407|ref|YP_007283167.1| - 4.7e-29 101.5 5.3 1.2e-28 100.2 5.3 1.6 1 1 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|433637407|ref|YP_007283167.1| - 0.042 14.0 0.2 0.079 13.1 0.2 1.4 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter PKcGMP_CC PF16808.5 gi|433637407|ref|YP_007283167.1| - 0.54 10.2 1.7 0.86 9.5 1.7 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Helicase_C_2 PF13307.6 gi|433637408|ref|YP_007283168.1| - 2.6e-24 86.3 0.0 7.1e-24 84.9 0.0 1.7 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|433637408|ref|YP_007283168.1| - 4.9e-20 71.9 0.0 8.9e-20 71.0 0.0 1.4 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 gi|433637408|ref|YP_007283168.1| - 4.2e-08 33.2 0.4 4.2e-06 26.7 0.0 3.0 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|433637408|ref|YP_007283168.1| - 1.2e-05 25.4 0.1 0.00054 20.0 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ATPase PF06745.13 gi|433637408|ref|YP_007283168.1| - 0.003 17.0 0.0 0.0052 16.2 0.0 1.3 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|433637408|ref|YP_007283168.1| - 0.0065 16.1 1.4 0.11 12.1 0.1 2.9 2 1 0 2 2 2 1 AAA domain Zot PF05707.12 gi|433637408|ref|YP_007283168.1| - 0.012 15.2 0.0 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) PhoH PF02562.16 gi|433637408|ref|YP_007283168.1| - 0.016 14.6 0.0 0.051 13.0 0.0 1.7 2 0 0 2 2 2 0 PhoH-like protein AAA_34 PF13872.6 gi|433637408|ref|YP_007283168.1| - 0.055 12.4 0.0 0.1 11.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 TrwB_AAD_bind PF10412.9 gi|433637408|ref|YP_007283168.1| - 0.059 12.3 0.0 0.2 10.5 0.0 1.8 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Asparaginase_C PF17763.1 gi|433637408|ref|YP_007283168.1| - 0.073 13.3 0.2 0.23 11.7 0.1 1.8 1 1 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain DUF2075 PF09848.9 gi|433637408|ref|YP_007283168.1| - 0.13 11.5 0.1 8.3 5.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ABC_tran_CTD PF16326.5 gi|433637408|ref|YP_007283168.1| - 0.98 9.7 5.0 4.6 7.6 5.0 2.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain 2_5_RNA_ligase2 PF13563.6 gi|433637409|ref|YP_007283169.1| - 9.8e-12 45.0 0.0 1.2e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.16 gi|433637409|ref|YP_007283169.1| - 3.8e-08 33.4 0.1 0.00013 22.1 0.0 2.6 2 1 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.9 gi|433637409|ref|YP_007283169.1| - 0.038 13.9 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain Phage_holin_3_6 PF07332.11 gi|433637410|ref|YP_007283170.1| - 0.21 11.7 10.7 0.24 11.5 10.7 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Phage_holin_2_4 PF16082.5 gi|433637411|ref|YP_007283171.1| - 0.0041 16.8 0.0 0.0041 16.8 0.0 1.9 2 0 0 2 2 2 1 Bacteriophage holin family, superfamily II-like DUF3862 PF12978.7 gi|433637411|ref|YP_007283171.1| - 0.17 11.7 0.0 5.7 6.7 0.0 2.1 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3862) Arginosuc_synth PF00764.19 gi|433637412|ref|YP_007283172.1| - 1.6e-138 462.2 0.0 1.9e-138 462.0 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|433637412|ref|YP_007283172.1| - 0.00011 21.8 0.0 0.0002 20.9 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|433637412|ref|YP_007283172.1| - 0.0094 15.1 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|433637412|ref|YP_007283172.1| - 0.031 13.9 1.6 0.15 11.7 0.1 2.2 2 0 0 2 2 2 0 Asparagine synthase tRNA_Me_trans PF03054.16 gi|433637412|ref|YP_007283172.1| - 0.056 12.2 0.0 0.1 11.4 0.0 1.4 1 0 0 1 1 1 0 tRNA methyl transferase SMC_hinge PF06470.13 gi|433637412|ref|YP_007283172.1| - 0.7 10.2 4.0 2.4 8.5 0.2 2.6 3 0 0 3 3 3 0 SMC proteins Flexible Hinge Domain Lyase_1 PF00206.20 gi|433637413|ref|YP_007283173.1| - 1.2e-50 172.7 1.0 2.3e-50 171.8 0.0 1.8 2 1 1 3 3 3 1 Lyase ASL_C2 PF14698.6 gi|433637413|ref|YP_007283173.1| - 1.2e-17 64.4 4.4 2.4e-17 63.4 2.6 2.6 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal ADSL_C PF10397.9 gi|433637413|ref|YP_007283173.1| - 0.0046 17.5 1.5 0.016 15.7 0.3 2.6 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus AWPM-19 PF05512.11 gi|433637413|ref|YP_007283173.1| - 2.1 8.5 6.3 18 5.5 0.2 2.7 2 0 0 2 2 2 0 AWPM-19-like family ADD_ATRX PF17981.1 gi|433637414|ref|YP_007283174.1| - 0.0011 18.8 3.9 0.14 12.0 0.1 2.1 1 1 1 2 2 2 2 Cysteine Rich ADD domain DNA_RNApol_7kD PF03604.13 gi|433637414|ref|YP_007283174.1| - 0.0014 18.2 1.4 0.0043 16.7 1.4 1.7 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-HYPF PF07503.12 gi|433637414|ref|YP_007283174.1| - 0.0095 15.7 0.3 2 8.2 0.1 2.2 2 0 0 2 2 2 2 HypF finger Lar_restr_allev PF14354.6 gi|433637414|ref|YP_007283174.1| - 0.028 14.8 0.2 0.039 14.3 0.2 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|433637414|ref|YP_007283174.1| - 0.04 13.6 0.4 4.4 7.2 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Desulfoferrod_N PF06397.12 gi|433637414|ref|YP_007283174.1| - 0.063 12.9 0.7 1.3 8.7 0.2 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DZR PF12773.7 gi|433637414|ref|YP_007283174.1| - 0.066 13.2 0.9 0.88 9.6 0.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433637414|ref|YP_007283174.1| - 0.071 13.2 1.9 0.25 11.5 1.9 1.8 1 1 1 2 2 2 0 Zinc ribbon domain YhfH PF14149.6 gi|433637414|ref|YP_007283174.1| - 0.13 12.3 1.4 12 6.0 0.1 2.1 2 0 0 2 2 2 0 YhfH-like protein DUF1610 PF07754.11 gi|433637414|ref|YP_007283174.1| - 0.17 11.9 6.3 1 9.4 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DUF1451 PF07295.11 gi|433637414|ref|YP_007283174.1| - 0.18 11.9 0.8 0.22 11.6 0.8 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain DUF1833 PF08875.11 gi|433637414|ref|YP_007283174.1| - 0.21 11.1 0.4 3.5 7.2 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1833) Vps36-NZF-N PF16988.5 gi|433637414|ref|YP_007283174.1| - 0.21 11.0 1.9 1.6 8.2 1.9 1.9 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF983 PF06170.12 gi|433637414|ref|YP_007283174.1| - 0.37 11.2 1.1 8.6 6.8 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF983) TF_Zn_Ribbon PF08271.12 gi|433637414|ref|YP_007283174.1| - 0.77 9.3 6.2 2.1 7.9 6.2 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Prok-RING_1 PF14446.6 gi|433637414|ref|YP_007283174.1| - 1.4 8.9 5.3 2.5 8.1 5.3 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 RimK PF08443.11 gi|433637415|ref|YP_007283175.1| - 3.7e-22 78.8 0.0 1.3e-21 77.0 0.0 1.7 2 0 0 2 2 2 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|433637415|ref|YP_007283175.1| - 1.1e-08 34.7 0.0 2.6e-08 33.5 0.0 1.5 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|433637415|ref|YP_007283175.1| - 2.3e-08 34.2 0.0 3.6e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|433637415|ref|YP_007283175.1| - 0.00017 21.2 0.0 0.00037 20.0 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|433637415|ref|YP_007283175.1| - 0.00017 21.2 0.0 0.001 18.7 0.0 2.2 2 1 0 2 2 2 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|433637415|ref|YP_007283175.1| - 0.00033 20.2 0.0 0.0029 17.1 0.0 2.5 1 1 1 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|433637415|ref|YP_007283175.1| - 0.0099 15.2 0.0 0.033 13.4 0.0 1.7 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp Semialdhyde_dh PF01118.24 gi|433637416|ref|YP_007283176.1| - 3.2e-26 92.1 0.0 6.3e-26 91.2 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|433637416|ref|YP_007283176.1| - 2.5e-08 34.2 0.0 5e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain AA_kinase PF00696.28 gi|433637417|ref|YP_007283177.1| - 1.5e-36 126.2 7.1 1.8e-36 126.0 7.1 1.0 1 0 0 1 1 1 1 Amino acid kinase family Aminotran_3 PF00202.21 gi|433637418|ref|YP_007283178.1| - 2.7e-103 345.8 0.0 3.4e-103 345.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Peptidase_M20 PF01546.28 gi|433637419|ref|YP_007283179.1| - 1.1e-16 61.1 3.2 8.7e-15 55.0 3.2 2.9 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|433637419|ref|YP_007283179.1| - 0.00029 20.7 0.0 0.00053 19.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain OTCace_N PF02729.21 gi|433637420|ref|YP_007283180.1| - 3.6e-51 173.1 0.0 5e-51 172.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|433637420|ref|YP_007283180.1| - 6.9e-49 165.9 0.0 9.1e-49 165.5 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PALP PF00291.25 gi|433637421|ref|YP_007283181.1| - 6.8e-70 235.8 8.2 8e-70 235.6 8.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4140 PF13600.6 gi|433637423|ref|YP_007283183.1| - 0.023 15.2 1.5 0.032 14.7 1.5 1.2 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Pox_A_type_inc PF04508.12 gi|433637423|ref|YP_007283183.1| - 0.095 12.6 2.2 0.2 11.6 2.2 1.5 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat Striatin PF08232.12 gi|433637423|ref|YP_007283183.1| - 0.72 10.4 4.7 0.87 10.2 4.0 1.5 1 1 0 1 1 1 0 Striatin family 2-Hacid_dh_C PF02826.19 gi|433637424|ref|YP_007283184.1| - 6.2e-59 198.3 0.0 1.7e-58 196.9 0.0 1.8 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|433637424|ref|YP_007283184.1| - 2.9e-36 124.1 1.0 5.4e-36 123.2 1.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|433637424|ref|YP_007283184.1| - 0.00038 20.2 0.1 0.0017 18.1 0.1 2.3 1 0 0 1 1 1 1 ACT domain UDPG_MGDP_dh_C PF03720.15 gi|433637424|ref|YP_007283184.1| - 0.003 17.9 0.1 0.014 15.8 0.0 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TrkA_N PF02254.18 gi|433637424|ref|YP_007283184.1| - 0.0042 17.3 0.5 0.017 15.3 0.1 2.3 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_2 PF03446.15 gi|433637424|ref|YP_007283184.1| - 0.018 15.2 0.3 0.064 13.4 0.0 2.2 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|433637424|ref|YP_007283184.1| - 0.019 14.5 0.1 0.26 10.8 0.0 2.5 2 1 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|433637424|ref|YP_007283184.1| - 0.1 12.7 0.0 0.25 11.4 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase HAD PF12710.7 gi|433637425|ref|YP_007283185.1| - 5.5e-23 82.3 0.9 6.7e-23 82.1 0.9 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433637425|ref|YP_007283185.1| - 4.4e-16 59.8 7.8 2.8e-14 53.9 7.8 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|433637425|ref|YP_007283185.1| - 3.7e-08 33.4 0.1 2.6e-06 27.4 0.0 2.6 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|433637425|ref|YP_007283185.1| - 2.3e-05 24.6 0.1 0.0023 18.0 0.0 2.9 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|433637425|ref|YP_007283185.1| - 0.045 13.3 0.0 0.083 12.4 0.0 1.3 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase Put_Phosphatase PF06888.12 gi|433637425|ref|YP_007283185.1| - 0.091 12.1 0.0 0.49 9.8 0.0 1.9 2 0 0 2 2 2 0 Putative Phosphatase Hydrolase_6 PF13344.6 gi|433637425|ref|YP_007283185.1| - 0.16 12.1 0.0 0.69 10.1 0.0 2.1 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase HXXSHH PF07586.11 gi|433637425|ref|YP_007283185.1| - 0.16 11.5 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) HisKA_7TM PF16927.5 gi|433637428|ref|YP_007283188.1| - 1.5e-49 169.0 17.7 2e-49 168.6 17.7 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HisKA PF00512.25 gi|433637428|ref|YP_007283188.1| - 6.5e-13 48.5 0.0 3.5e-12 46.2 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 gi|433637428|ref|YP_007283188.1| - 4e-12 46.6 0.0 6.5e-11 42.7 0.0 2.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|433637428|ref|YP_007283188.1| - 9e-11 41.8 0.1 2.1e-10 40.6 0.1 1.6 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|433637428|ref|YP_007283188.1| - 5.8e-10 39.4 6.0 2.7e-09 37.2 3.2 2.4 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|433637428|ref|YP_007283188.1| - 1.1e-08 34.9 0.6 3.4e-08 33.3 0.6 1.9 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|433637428|ref|YP_007283188.1| - 1.5e-08 34.8 0.1 3.6e-08 33.6 0.1 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.6 gi|433637428|ref|YP_007283188.1| - 0.0054 16.7 0.3 0.029 14.3 0.0 2.4 2 1 0 2 2 2 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|433637428|ref|YP_007283188.1| - 0.093 12.9 0.4 0.28 11.4 0.0 2.0 2 0 0 2 2 2 0 PAS fold PAS_10 PF13596.6 gi|433637428|ref|YP_007283188.1| - 0.096 13.3 0.2 0.26 11.9 0.2 1.7 1 0 0 1 1 1 0 PAS domain ABC2_membrane_3 PF12698.7 gi|433637428|ref|YP_007283188.1| - 2.7 7.0 8.7 6.2 5.8 8.4 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2569 PF10754.9 gi|433637428|ref|YP_007283188.1| - 5.5 7.4 7.3 0.31 11.5 0.6 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF2569) Abhydrolase_1 PF00561.20 gi|433637429|ref|YP_007283189.1| - 2.4e-29 102.8 0.1 3.1e-29 102.4 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|433637429|ref|YP_007283189.1| - 0.003 16.9 0.0 0.0048 16.2 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 gi|433637429|ref|YP_007283189.1| - 0.0076 15.9 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Putative esterase Tannase PF07519.11 gi|433637429|ref|YP_007283189.1| - 0.066 12.1 0.0 0.13 11.2 0.0 1.4 1 0 0 1 1 1 0 Tannase and feruloyl esterase Radical_SAM PF04055.21 gi|433637430|ref|YP_007283190.1| - 1.6e-17 64.4 0.4 1.1e-14 55.2 0.1 2.3 2 0 0 2 2 2 2 Radical SAM superfamily BATS PF06968.13 gi|433637430|ref|YP_007283190.1| - 5.6e-16 58.5 0.0 1.1e-15 57.5 0.0 1.5 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Cys_Met_Meta_PP PF01053.20 gi|433637431|ref|YP_007283191.1| - 3.1e-127 424.3 0.0 3.6e-127 424.0 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|433637431|ref|YP_007283191.1| - 7.4e-10 38.7 0.7 1.4e-09 37.7 0.7 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|433637431|ref|YP_007283191.1| - 8.2e-09 35.1 0.0 1.2e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433637431|ref|YP_007283191.1| - 0.00028 20.0 0.0 0.00042 19.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|433637431|ref|YP_007283191.1| - 0.0097 15.2 0.0 0.023 14.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|433637431|ref|YP_007283191.1| - 0.28 9.8 0.1 0.42 9.3 0.1 1.2 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Copper-bind PF00127.20 gi|433637433|ref|YP_007283193.1| - 1.5e-06 28.6 0.0 3e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TAT_signal PF10518.9 gi|433637433|ref|YP_007283193.1| - 1.7e-06 27.7 6.1 2.6e-06 27.0 6.1 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence K_channel_TID PF07941.11 gi|433637433|ref|YP_007283193.1| - 0.36 11.3 4.4 0.65 10.5 4.4 1.4 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain LPAM_2 PF13627.6 gi|433637433|ref|YP_007283193.1| - 7.3 6.6 6.1 13 5.8 6.1 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site AAA PF00004.29 gi|433637434|ref|YP_007283194.1| - 1.3e-38 132.4 0.0 2.4e-38 131.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|433637434|ref|YP_007283194.1| - 2.6e-10 40.0 0.1 7.1e-10 38.5 0.1 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|433637434|ref|YP_007283194.1| - 1.4e-05 25.2 0.0 7e-05 22.8 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|433637434|ref|YP_007283194.1| - 7.3e-05 23.3 0.5 0.006 17.1 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|433637434|ref|YP_007283194.1| - 9.4e-05 22.9 3.1 0.0021 18.5 1.8 3.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|433637434|ref|YP_007283194.1| - 0.00036 20.8 1.3 0.13 12.6 0.0 2.8 2 1 1 3 3 3 1 AAA domain AAA_2 PF07724.14 gi|433637434|ref|YP_007283194.1| - 0.00067 19.8 0.0 0.0017 18.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|433637434|ref|YP_007283194.1| - 0.00079 19.0 0.0 0.0017 17.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 gi|433637434|ref|YP_007283194.1| - 0.00084 19.6 2.6 0.0044 17.3 0.0 3.0 3 1 0 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|433637434|ref|YP_007283194.1| - 0.0011 18.7 0.0 0.0024 17.6 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|433637434|ref|YP_007283194.1| - 0.0016 18.6 0.1 0.011 15.9 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|433637434|ref|YP_007283194.1| - 0.0044 16.6 0.2 0.045 13.3 0.0 2.5 1 1 2 3 3 3 1 AAA domain TIP49 PF06068.13 gi|433637434|ref|YP_007283194.1| - 0.012 14.8 0.0 0.039 13.2 0.0 1.7 2 1 0 2 2 2 0 TIP49 P-loop domain AAA_11 PF13086.6 gi|433637434|ref|YP_007283194.1| - 0.015 15.1 0.0 0.025 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|433637434|ref|YP_007283194.1| - 0.016 14.4 0.7 0.027 13.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 gi|433637434|ref|YP_007283194.1| - 0.022 14.5 0.2 0.1 12.4 0.0 2.2 1 1 2 3 3 3 0 IstB-like ATP binding protein AAA_3 PF07726.11 gi|433637434|ref|YP_007283194.1| - 0.032 14.1 0.3 0.081 12.8 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|433637434|ref|YP_007283194.1| - 0.033 14.6 0.0 0.1 13.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|433637434|ref|YP_007283194.1| - 0.038 14.1 0.0 0.093 12.8 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase TniB PF05621.11 gi|433637434|ref|YP_007283194.1| - 0.058 12.8 0.0 5.4 6.4 0.0 2.6 1 1 1 2 2 2 0 Bacterial TniB protein ABC_tran PF00005.27 gi|433637434|ref|YP_007283194.1| - 0.063 13.8 0.0 0.26 11.8 0.0 2.0 2 0 0 2 2 2 0 ABC transporter Mg_chelatase PF01078.21 gi|433637434|ref|YP_007283194.1| - 0.068 12.6 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|433637434|ref|YP_007283194.1| - 0.079 13.3 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Lactamase_B_2 PF12706.7 gi|433637435|ref|YP_007283195.1| - 7.3e-22 77.9 0.2 9.8e-22 77.5 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433637435|ref|YP_007283195.1| - 1.7e-07 31.4 4.5 2.5e-07 30.9 4.5 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Peptidase_M3 PF01432.20 gi|433637436|ref|YP_007283196.1| - 1.8e-18 67.1 0.0 1.7e-17 63.9 0.0 2.4 2 1 0 2 2 2 1 Peptidase family M3 US22 PF02393.16 gi|433637436|ref|YP_007283196.1| - 0.049 13.9 1.0 1.2 9.4 0.2 2.7 1 1 1 2 2 2 0 US22 like DUF4255 PF14065.6 gi|433637438|ref|YP_007283198.1| - 2e-33 115.5 0.1 2.3e-33 115.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4255) VTC PF09359.10 gi|433637438|ref|YP_007283198.1| - 0.11 11.9 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 VTC domain AAA PF00004.29 gi|433637439|ref|YP_007283199.1| - 2e-26 93.0 0.0 7.5e-26 91.1 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|433637439|ref|YP_007283199.1| - 0.001 18.8 0.0 0.0021 17.8 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|433637439|ref|YP_007283199.1| - 0.0014 18.8 0.0 0.028 14.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) DUF4699 PF15770.5 gi|433637439|ref|YP_007283199.1| - 0.0018 18.1 0.1 0.0036 17.1 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4699) SnoaL_2 PF12680.7 gi|433637439|ref|YP_007283199.1| - 0.0021 18.7 1.5 0.25 12.0 0.1 3.7 3 0 0 3 3 3 1 SnoaL-like domain Zot PF05707.12 gi|433637439|ref|YP_007283199.1| - 0.0033 17.1 0.1 0.065 12.9 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_22 PF13401.6 gi|433637439|ref|YP_007283199.1| - 0.01 16.1 3.8 0.84 9.9 0.0 4.1 3 2 1 4 4 3 0 AAA domain AAA_33 PF13671.6 gi|433637439|ref|YP_007283199.1| - 0.011 16.0 0.0 0.047 13.8 0.0 2.1 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|433637439|ref|YP_007283199.1| - 0.031 13.6 0.0 3.5 6.8 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_16 PF13191.6 gi|433637439|ref|YP_007283199.1| - 0.035 14.5 1.3 0.49 10.7 0.2 3.1 3 1 0 3 3 3 0 AAA ATPase domain Torsin PF06309.11 gi|433637439|ref|YP_007283199.1| - 0.07 13.2 0.0 0.37 10.9 0.0 2.0 2 0 0 2 2 2 0 Torsin NTF2 PF02136.20 gi|433637439|ref|YP_007283199.1| - 0.092 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain AAA_28 PF13521.6 gi|433637439|ref|YP_007283199.1| - 0.77 10.0 3.7 12 6.1 0.1 3.7 3 1 1 4 4 4 0 AAA domain DUF4157 PF13699.6 gi|433637440|ref|YP_007283200.1| - 1.7e-31 108.3 0.2 4e-31 107.1 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) HAP1_N PF04849.13 gi|433637440|ref|YP_007283200.1| - 0.04 13.1 0.0 0.071 12.3 0.0 1.3 1 0 0 1 1 1 0 HAP1 N-terminal conserved region ZapB PF06005.12 gi|433637440|ref|YP_007283200.1| - 0.084 13.3 0.4 0.24 11.9 0.4 1.7 1 0 0 1 1 1 0 Cell division protein ZapB ALF PF03752.13 gi|433637440|ref|YP_007283200.1| - 0.6 10.1 0.0 0.6 10.1 0.0 3.2 3 0 0 3 3 3 0 Short repeats of unknown function DUF4157 PF13699.6 gi|433637442|ref|YP_007283202.1| - 9.6e-31 105.9 0.7 2.1e-30 104.8 0.7 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) Peptidase_M91 PF14891.6 gi|433637442|ref|YP_007283202.1| - 0.018 15.4 0.1 0.018 15.4 0.1 1.8 2 0 0 2 2 2 0 Effector protein DinB_2 PF12867.7 gi|433637442|ref|YP_007283202.1| - 0.062 13.8 0.9 0.44 11.1 0.7 2.4 2 1 0 2 2 2 0 DinB superfamily DUF4157 PF13699.6 gi|433637444|ref|YP_007283204.1| - 1.1e-18 67.2 1.5 3.4e-18 65.6 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) Shisa PF13908.6 gi|433637444|ref|YP_007283204.1| - 0.88 9.8 3.3 1.2 9.4 3.3 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Gly-zipper_Omp PF13488.6 gi|433637445|ref|YP_007283205.1| - 0.042 13.9 22.3 0.12 12.4 22.3 1.8 1 1 0 1 1 1 0 Glycine zipper Bacteriocin_IIc PF10439.9 gi|433637445|ref|YP_007283205.1| - 0.18 11.9 15.7 0.31 11.2 15.7 1.4 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_YMGG PF13441.6 gi|433637445|ref|YP_007283205.1| - 0.39 10.5 23.1 0.82 9.5 23.1 1.6 1 1 0 1 1 1 0 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 gi|433637445|ref|YP_007283205.1| - 0.77 9.7 19.9 1.8 8.5 19.9 1.7 1 1 0 1 1 1 0 Glycine zipper 2TM domain Gly-zipper_OmpA PF13436.6 gi|433637445|ref|YP_007283205.1| - 1.4 8.7 23.6 0.25 11.1 6.8 2.3 1 1 1 2 2 2 0 Glycine-zipper domain DUF1269 PF06897.12 gi|433637445|ref|YP_007283205.1| - 2.4 8.5 11.9 1.9 8.8 10.1 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1269) TraT PF05818.12 gi|433637445|ref|YP_007283205.1| - 8.2 6.0 8.2 15 5.1 8.2 1.5 1 1 0 1 1 1 0 Enterobacterial TraT complement resistance protein adh_short_C2 PF13561.6 gi|433637447|ref|YP_007283207.1| - 3.6e-49 167.4 0.1 6e-49 166.7 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433637447|ref|YP_007283207.1| - 3.4e-39 134.3 0.0 4.1e-39 134.1 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433637447|ref|YP_007283207.1| - 6.4e-10 39.2 0.2 8.3e-10 38.9 0.2 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|433637447|ref|YP_007283207.1| - 0.0044 16.9 0.2 0.0064 16.4 0.2 1.3 1 0 0 1 1 1 1 NAD(P)H-binding YjeF_N PF03853.15 gi|433637447|ref|YP_007283207.1| - 0.0072 16.2 0.2 0.014 15.3 0.1 1.5 1 1 0 1 1 1 1 YjeF-related protein N-terminus Epimerase PF01370.21 gi|433637447|ref|YP_007283207.1| - 0.12 11.8 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family RHH_1 PF01402.21 gi|433637448|ref|YP_007283208.1| - 6e-05 22.8 0.2 6e-05 22.8 0.2 2.3 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family DUF3562 PF12085.8 gi|433637448|ref|YP_007283208.1| - 0.013 15.1 0.1 0.026 14.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) CopG_antitoxin PF12441.8 gi|433637448|ref|YP_007283208.1| - 0.033 14.7 0.3 0.078 13.5 0.0 1.8 2 1 0 2 2 2 0 CopG antitoxin of type II toxin-antitoxin system RHH_4 PF13467.6 gi|433637448|ref|YP_007283208.1| - 0.09 12.7 0.2 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 Ribbon-helix-helix domain TfuA PF07812.12 gi|433637448|ref|YP_007283208.1| - 0.13 12.0 0.0 0.16 11.7 0.0 1.3 1 1 0 1 1 1 0 TfuA-like protein HNH PF01844.23 gi|433637450|ref|YP_007283210.1| - 1.8e-07 31.2 13.2 5.2e-07 29.7 0.4 4.9 5 0 0 5 5 5 1 HNH endonuclease HNH_2 PF13391.6 gi|433637450|ref|YP_007283210.1| - 0.0053 16.9 0.6 0.016 15.3 0.6 1.8 1 0 0 1 1 1 1 HNH endonuclease zf-C2HC_2 PF13913.6 gi|433637450|ref|YP_007283210.1| - 0.018 15.0 0.5 0.018 15.0 0.5 3.8 4 0 0 4 4 4 0 zinc-finger of a C2HC-type C1_1 PF00130.22 gi|433637450|ref|YP_007283210.1| - 0.025 14.5 0.4 0.025 14.5 0.4 4.8 5 1 0 5 5 5 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-BED PF02892.15 gi|433637450|ref|YP_007283210.1| - 0.037 14.1 0.4 11 6.1 0.1 2.8 2 0 0 2 2 2 0 BED zinc finger zf-C2H2 PF00096.26 gi|433637450|ref|YP_007283210.1| - 0.1 13.1 1.4 0.1 13.1 1.4 5.0 6 0 0 6 6 5 0 Zinc finger, C2H2 type PHF5 PF03660.14 gi|433637450|ref|YP_007283210.1| - 0.41 10.9 0.1 0.41 10.9 0.1 3.4 4 0 0 4 4 4 0 PHF5-like protein DZR PF12773.7 gi|433637450|ref|YP_007283210.1| - 2 8.5 28.6 1.8e+04 -12.6 28.7 5.1 1 1 0 1 1 0 0 Double zinc ribbon zf-C2H2_6 PF13912.6 gi|433637450|ref|YP_007283210.1| - 2.2 8.4 21.4 2.2 8.4 0.9 4.8 5 0 0 5 5 5 0 C2H2-type zinc finger zf-Di19 PF05605.12 gi|433637450|ref|YP_007283210.1| - 2.3 8.6 14.7 20 5.6 0.1 4.1 4 1 0 4 4 4 0 Drought induced 19 protein (Di19), zinc-binding DUF2318 PF10080.9 gi|433637450|ref|YP_007283210.1| - 8.3 6.6 10.0 7.2 6.8 0.1 4.2 4 1 1 5 5 5 0 Predicted membrane protein (DUF2318) DUF2116 PF09889.9 gi|433637450|ref|YP_007283210.1| - 8.7 6.4 17.7 0.98 9.4 0.5 4.0 5 1 0 5 5 5 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) CBS PF00571.28 gi|433637451|ref|YP_007283211.1| - 1.1e-21 77.0 0.8 1.2e-10 41.6 0.1 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|433637451|ref|YP_007283211.1| - 4.9e-13 48.9 8.5 3.5e-07 29.8 0.4 3.6 2 1 1 3 3 3 2 Peptidase family M50 DUF3267 PF11667.8 gi|433637451|ref|YP_007283211.1| - 0.00023 21.4 2.7 0.00023 21.4 2.7 2.4 2 0 0 2 2 2 1 Putative zincin peptidase Reductase_C PF14759.6 gi|433637451|ref|YP_007283211.1| - 0.028 15.0 0.0 0.09 13.3 0.0 1.8 1 0 0 1 1 1 0 Reductase C-terminal FixQ PF05545.11 gi|433637451|ref|YP_007283211.1| - 0.056 13.4 0.2 0.31 11.0 0.2 2.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ HAD PF12710.7 gi|433637451|ref|YP_007283211.1| - 0.071 13.5 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Peptidase_M50B PF13398.6 gi|433637451|ref|YP_007283211.1| - 0.082 12.5 14.3 0.11 12.1 11.6 2.4 1 1 1 2 2 2 0 Peptidase M50B-like Reprolysin_3 PF13582.6 gi|433637451|ref|YP_007283211.1| - 0.23 12.0 0.1 0.43 11.1 0.1 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF3951 PF13131.6 gi|433637451|ref|YP_007283211.1| - 0.35 11.1 0.2 0.35 11.1 0.2 3.7 4 1 0 4 4 4 0 Protein of unknown function (DUF3951) IIGP PF05049.13 gi|433637452|ref|YP_007283212.1| - 0.008 15.3 0.1 0.0099 15.0 0.1 1.1 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) BOP1NT PF08145.12 gi|433637452|ref|YP_007283212.1| - 0.068 13.1 0.2 0.09 12.7 0.2 1.2 1 0 0 1 1 1 0 BOP1NT (NUC169) domain Radical_SAM PF04055.21 gi|433637453|ref|YP_007283213.1| - 8.5e-12 45.8 0.0 1.9e-11 44.7 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|433637453|ref|YP_007283213.1| - 1.1e-07 32.3 0.1 2.3e-07 31.2 0.1 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|433637453|ref|YP_007283213.1| - 3.4e-07 30.6 0.0 6.9e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|433637453|ref|YP_007283213.1| - 2.4e-05 24.4 0.0 4.7e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF469 PF04320.14 gi|433637453|ref|YP_007283213.1| - 0.085 13.7 0.0 0.22 12.4 0.0 1.6 1 0 0 1 1 1 0 Protein with unknown function (DUF469) Sulfatase PF00884.23 gi|433637454|ref|YP_007283214.1| - 4e-36 125.0 0.0 5.1e-36 124.6 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|433637454|ref|YP_007283214.1| - 1.5e-06 28.1 2.0 5.1e-05 23.0 2.0 2.5 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 gi|433637454|ref|YP_007283214.1| - 0.02 14.8 0.1 0.18 11.7 0.1 2.2 1 1 0 1 1 1 0 Domain of unknown function Phosphoesterase PF04185.14 gi|433637454|ref|YP_007283214.1| - 0.028 13.6 0.1 0.11 11.7 0.0 1.8 2 0 0 2 2 2 0 Phosphoesterase family DUF4976 PF16347.5 gi|433637454|ref|YP_007283214.1| - 0.13 12.6 0.0 0.29 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Metalloenzyme PF01676.18 gi|433637454|ref|YP_007283214.1| - 0.17 11.3 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 Metalloenzyme superfamily Aldo_ket_red PF00248.21 gi|433637455|ref|YP_007283215.1| - 8.9e-49 166.3 0.0 6.9e-47 160.1 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family DUF3231 PF11553.8 gi|433637456|ref|YP_007283216.1| - 0.16 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) Ribosomal_L16 PF00252.18 gi|433637457|ref|YP_007283217.1| - 1.1e-30 106.3 0.1 1.3e-30 106.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e NUDIX PF00293.28 gi|433637458|ref|YP_007283218.1| - 1.9e-13 50.6 1.1 3e-13 50.0 1.1 1.2 1 0 0 1 1 1 1 NUDIX domain RimK PF08443.11 gi|433637459|ref|YP_007283219.1| - 3.6e-26 91.9 0.0 4.6e-26 91.6 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|433637459|ref|YP_007283219.1| - 4.5e-11 42.5 0.0 6.6e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|433637459|ref|YP_007283219.1| - 4.9e-08 33.2 0.0 7.8e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|433637459|ref|YP_007283219.1| - 2.4e-05 23.7 0.0 0.076 12.2 0.0 2.4 2 1 1 3 3 3 2 Sugar-transfer associated ATP-grasp TTL PF03133.15 gi|433637459|ref|YP_007283219.1| - 8.7e-05 21.8 0.0 0.029 13.5 0.0 2.1 2 0 0 2 2 2 2 Tubulin-tyrosine ligase family Dala_Dala_lig_C PF07478.13 gi|433637459|ref|YP_007283219.1| - 0.007 15.9 0.0 0.031 13.8 0.0 1.9 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.17 gi|433637459|ref|YP_007283219.1| - 0.049 13.1 0.0 0.068 12.7 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ArsA_HSP20 PF17886.1 gi|433637460|ref|YP_007283220.1| - 6.1e-19 67.3 0.0 8.5e-19 66.9 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|433637460|ref|YP_007283220.1| - 3.4e-09 36.8 0.1 8.4e-08 32.3 0.1 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family GvpH PF05455.11 gi|433637460|ref|YP_007283220.1| - 2.1e-06 28.0 0.8 2.6e-06 27.6 0.8 1.1 1 0 0 1 1 1 1 GvpH PIH1_CS PF18201.1 gi|433637460|ref|YP_007283220.1| - 0.038 14.4 0.0 0.046 14.1 0.0 1.2 1 0 0 1 1 1 0 PIH1 CS-like domain Gp_dh_C PF02800.20 gi|433637461|ref|YP_007283221.1| - 3.7e-20 72.1 0.0 6.1e-20 71.4 0.0 1.4 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|433637461|ref|YP_007283221.1| - 2.1e-09 37.5 0.0 6.3e-09 36.0 0.0 1.8 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|433637461|ref|YP_007283221.1| - 3.2e-05 24.2 0.0 0.00011 22.5 0.0 2.0 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|433637461|ref|YP_007283221.1| - 0.00023 21.8 0.1 0.0019 18.8 0.1 2.3 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433637461|ref|YP_007283221.1| - 0.0087 15.4 0.1 0.049 13.0 0.1 2.1 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Peptidase_M29 PF02073.15 gi|433637462|ref|YP_007283222.1| - 2.8e-13 49.5 0.1 5.1e-12 45.3 0.1 2.0 2 0 0 2 2 2 2 Thermophilic metalloprotease (M29) Lar_restr_allev PF14354.6 gi|433637463|ref|YP_007283223.1| - 0.006 16.9 0.2 0.013 15.8 0.2 1.6 1 0 0 1 1 1 1 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.6 gi|433637463|ref|YP_007283223.1| - 0.029 14.3 0.5 0.072 13.0 0.5 1.7 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433637463|ref|YP_007283223.1| - 0.048 13.8 1.5 4.7 7.4 0.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|433637463|ref|YP_007283223.1| - 3 7.7 4.2 8.1 6.3 4.2 1.8 1 1 0 1 1 1 0 zinc-ribbon domain PCMT PF01135.19 gi|433637464|ref|YP_007283224.1| - 2.2e-34 119.1 0.0 2.9e-34 118.7 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|433637464|ref|YP_007283224.1| - 1.1e-06 29.3 0.0 2.1e-06 28.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637464|ref|YP_007283224.1| - 4.5e-06 26.5 0.0 5.8e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433637464|ref|YP_007283224.1| - 0.00012 21.7 0.0 0.00018 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|433637464|ref|YP_007283224.1| - 0.0089 16.7 0.0 0.017 15.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|433637464|ref|YP_007283224.1| - 0.013 15.1 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|433637464|ref|YP_007283224.1| - 0.1 13.3 0.0 0.2 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Fibrillarin PF01269.17 gi|433637464|ref|YP_007283224.1| - 0.16 11.1 0.0 0.25 10.4 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin PrmA PF06325.13 gi|433637464|ref|YP_007283224.1| - 0.22 10.9 0.2 0.32 10.4 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) BAT PF15915.5 gi|433637465|ref|YP_007283225.1| - 3.5e-30 104.9 8.8 3.5e-30 104.9 8.8 3.5 3 0 0 3 3 3 1 GAF and HTH_10 associated domain Response_reg PF00072.24 gi|433637465|ref|YP_007283225.1| - 6e-22 77.9 0.0 1.5e-21 76.6 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HTH_10 PF04967.12 gi|433637465|ref|YP_007283225.1| - 2.3e-20 72.1 0.0 9.6e-20 70.1 0.0 2.2 2 0 0 2 2 2 1 HTH DNA binding domain GAF_2 PF13185.6 gi|433637465|ref|YP_007283225.1| - 7.7e-16 58.6 6.0 5.5e-09 36.4 1.4 2.6 2 0 0 2 2 2 2 GAF domain GAF PF01590.26 gi|433637465|ref|YP_007283225.1| - 3.9e-08 34.0 0.9 0.00011 22.9 0.3 2.6 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 gi|433637465|ref|YP_007283225.1| - 7.3e-07 29.6 0.0 0.00083 19.7 0.0 2.8 2 0 0 2 2 2 2 GAF domain OKR_DC_1_N PF03709.15 gi|433637465|ref|YP_007283225.1| - 4.1e-06 27.0 0.1 2.4e-05 24.5 0.0 2.5 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain GerE PF00196.19 gi|433637465|ref|YP_007283225.1| - 0.098 12.2 0.0 2.2 7.9 0.0 2.9 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family HTH_24 PF13412.6 gi|433637465|ref|YP_007283225.1| - 0.12 12.0 0.0 0.38 10.3 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Gluconate_2-dh3 PF13618.6 gi|433637466|ref|YP_007283226.1| - 3.2e-41 140.8 0.1 5e-41 140.1 0.1 1.3 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 GMC_oxred_C PF05199.13 gi|433637467|ref|YP_007283227.1| - 2.9e-20 73.2 0.0 5e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 gi|433637467|ref|YP_007283227.1| - 8.2e-12 45.1 0.0 1.2e-09 37.9 0.0 2.2 2 0 0 2 2 2 2 GMC oxidoreductase NAD_binding_8 PF13450.6 gi|433637467|ref|YP_007283227.1| - 0.084 13.1 0.1 0.27 11.5 0.1 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|433637467|ref|YP_007283227.1| - 0.12 11.4 0.0 4.9 6.1 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain DAO PF01266.24 gi|433637467|ref|YP_007283227.1| - 0.14 11.7 1.4 1.3 8.5 1.4 2.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase DUF997 PF06196.12 gi|433637468|ref|YP_007283228.1| - 0.011 15.7 0.1 0.015 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF997) PDDEXK_5 PF11645.8 gi|433637470|ref|YP_007283230.1| - 5.5e-42 143.0 0.0 6.1e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 PD-(D/E)XK endonuclease TAXi_N PF14543.6 gi|433637470|ref|YP_007283230.1| - 0.0039 17.4 0.1 0.0053 17.0 0.1 1.4 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal RNA_pol_Rpb5_C PF01191.19 gi|433637471|ref|YP_007283231.1| - 1.8e-24 85.4 0.5 2e-24 85.2 0.5 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain DUF3006 PF11213.8 gi|433637471|ref|YP_007283231.1| - 0.041 14.1 0.6 1.6 9.0 0.5 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3006) RNA_pol_Rpb2_1 PF04563.15 gi|433637472|ref|YP_007283232.1| - 4.6e-50 169.9 0.1 5.6e-50 169.7 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|433637472|ref|YP_007283232.1| - 3.5e-26 92.0 0.1 5.2e-26 91.4 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|433637472|ref|YP_007283232.1| - 9.6e-25 86.6 0.0 2e-24 85.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_6 PF00562.28 gi|433637473|ref|YP_007283233.1| - 6e-127 423.9 0.0 7.4e-127 423.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|433637473|ref|YP_007283233.1| - 1.3e-28 99.2 1.1 2e-28 98.6 0.2 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|433637473|ref|YP_007283233.1| - 3.3e-21 75.3 0.4 6.2e-21 74.5 0.4 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|433637473|ref|YP_007283233.1| - 4e-09 36.9 5.4 1.4e-08 35.1 5.4 2.0 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 OrfB_Zn_ribbon PF07282.11 gi|433637473|ref|YP_007283233.1| - 0.1 12.6 2.5 0.2 11.6 2.5 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain NOB1_Zn_bind PF08772.11 gi|433637473|ref|YP_007283233.1| - 0.11 12.7 0.2 0.22 11.7 0.2 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Auto_anti-p27 PF06677.12 gi|433637473|ref|YP_007283233.1| - 1.1 9.4 2.8 2 8.7 2.8 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) RNA_pol_Rpb1_1 PF04997.12 gi|433637474|ref|YP_007283234.1| - 4.3e-112 374.5 0.0 6.4e-112 373.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|433637474|ref|YP_007283234.1| - 2.1e-65 220.0 0.2 3.5e-65 219.3 0.2 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|433637474|ref|YP_007283234.1| - 6.4e-32 109.7 0.0 1.4e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|433637474|ref|YP_007283234.1| - 1.1e-28 100.1 0.0 2e-28 99.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|433637474|ref|YP_007283234.1| - 1.8e-26 93.2 0.0 3.4e-26 92.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 HTH_3 PF01381.22 gi|433637474|ref|YP_007283234.1| - 0.074 13.1 0.1 0.21 11.7 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix TraB PF01963.17 gi|433637474|ref|YP_007283234.1| - 0.096 12.6 0.1 0.38 10.6 0.1 1.9 2 0 0 2 2 2 0 TraB family Arg_decarb_HB PF17810.1 gi|433637474|ref|YP_007283234.1| - 0.31 11.3 1.1 0.47 10.7 0.1 1.8 2 0 0 2 2 2 0 Arginine decarboxylase helical bundle domain RNA_pol_Rpb1_5 PF04998.17 gi|433637475|ref|YP_007283235.1| - 8.3e-52 176.2 0.3 1e-51 175.9 0.3 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 Radical_SAM PF04055.21 gi|433637475|ref|YP_007283235.1| - 0.11 12.9 0.3 0.21 11.9 0.3 1.5 1 0 0 1 1 1 0 Radical SAM superfamily Nucleolin_bd PF16725.5 gi|433637475|ref|YP_007283235.1| - 0.2 11.4 0.8 0.64 9.7 0.4 2.1 2 0 0 2 2 2 0 Nucleolin binding domain KH_5 PF13184.6 gi|433637476|ref|YP_007283236.1| - 1.3e-11 44.5 0.1 8.6e-11 41.8 0.0 2.0 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|433637476|ref|YP_007283236.1| - 7.1e-09 35.4 0.2 8.8e-07 28.7 0.0 2.1 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|433637476|ref|YP_007283236.1| - 1.6e-08 34.2 0.0 0.00065 19.5 0.0 2.1 1 1 1 2 2 2 2 KH domain KH_1 PF00013.29 gi|433637476|ref|YP_007283236.1| - 0.11 12.3 0.0 2.8 7.8 0.0 2.2 2 0 0 2 2 2 0 KH domain PAP2_3 PF14378.6 gi|433637477|ref|YP_007283237.1| - 3.9e-18 65.8 12.8 3.9e-18 65.8 12.8 1.5 2 0 0 2 2 2 1 PAP2 superfamily PAP2 PF01569.21 gi|433637477|ref|YP_007283237.1| - 1.1e-11 44.7 7.2 1.5e-11 44.2 6.2 1.8 1 1 1 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 gi|433637477|ref|YP_007283237.1| - 0.03 14.8 2.1 0.03 14.8 2.1 2.3 2 0 0 2 2 2 0 PAP2 superfamily C-terminal DUF1772 PF08592.11 gi|433637477|ref|YP_007283237.1| - 1.3 9.3 19.2 0.12 12.6 1.4 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) LapA_dom PF06305.11 gi|433637477|ref|YP_007283237.1| - 7.4 6.5 7.8 7.5 6.4 0.1 3.0 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Ribosom_S12_S23 PF00164.25 gi|433637478|ref|YP_007283238.1| - 5.4e-50 167.8 0.4 6.6e-50 167.5 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|433637479|ref|YP_007283239.1| - 1.6e-35 121.9 1.6 2.2e-35 121.5 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e MFS_1 PF07690.16 gi|433637480|ref|YP_007283240.1| - 2.6e-27 95.7 27.2 2.6e-27 95.7 27.2 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433637480|ref|YP_007283240.1| - 0.0012 17.8 6.5 0.0012 17.8 6.5 2.7 2 1 1 3 3 3 1 MFS_1 like family Sugar_tr PF00083.24 gi|433637480|ref|YP_007283240.1| - 0.0075 15.2 2.5 0.0075 15.2 2.5 2.4 2 0 0 2 2 2 1 Sugar (and other) transporter LacY_symp PF01306.19 gi|433637480|ref|YP_007283240.1| - 0.14 10.9 9.5 0.0089 14.8 3.8 1.8 2 0 0 2 2 2 0 LacY proton/sugar symporter FMN_dh PF01070.18 gi|433637481|ref|YP_007283241.1| - 2.8e-126 421.2 0.0 3.3e-126 421.0 0.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|433637481|ref|YP_007283241.1| - 6.6e-06 25.6 0.1 0.017 14.4 0.0 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 gi|433637481|ref|YP_007283241.1| - 7.8e-06 25.1 0.0 4.3e-05 22.7 0.0 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|433637481|ref|YP_007283241.1| - 0.00071 18.8 0.0 0.001 18.3 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase TMP-TENI PF02581.17 gi|433637481|ref|YP_007283241.1| - 0.012 15.0 0.0 0.025 13.9 0.0 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase NMO PF03060.15 gi|433637481|ref|YP_007283241.1| - 0.052 12.9 0.3 0.1 12.0 0.3 1.4 1 0 0 1 1 1 0 Nitronate monooxygenase His_biosynth PF00977.21 gi|433637481|ref|YP_007283241.1| - 0.066 12.7 0.0 6.6 6.1 0.0 2.3 1 1 1 2 2 2 0 Histidine biosynthesis protein Dus PF01207.17 gi|433637481|ref|YP_007283241.1| - 0.27 10.3 0.0 3.4 6.7 0.0 2.1 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) GTP_EFTU PF00009.27 gi|433637483|ref|YP_007283243.1| - 2.7e-64 216.3 0.3 4.5e-64 215.6 0.3 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|433637483|ref|YP_007283243.1| - 3.3e-23 81.5 0.1 2.7e-22 78.6 0.0 2.5 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_IV PF03764.18 gi|433637483|ref|YP_007283243.1| - 1.6e-22 79.5 0.0 7e-22 77.5 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|433637483|ref|YP_007283243.1| - 3.4e-21 75.1 0.7 8.8e-21 73.8 0.7 1.8 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|433637483|ref|YP_007283243.1| - 4e-16 59.2 3.4 5.9e-16 58.6 1.2 2.6 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|433637483|ref|YP_007283243.1| - 4.4e-05 23.5 0.1 0.00019 21.5 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase SRPRB PF09439.10 gi|433637483|ref|YP_007283243.1| - 0.13 11.6 0.1 0.43 10.0 0.1 1.8 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Methyltransf_23 PF13489.6 gi|433637484|ref|YP_007283244.1| - 4.7e-20 72.1 0.0 7.6e-20 71.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433637484|ref|YP_007283244.1| - 1.1e-19 70.8 0.0 1.7e-19 70.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637484|ref|YP_007283244.1| - 4.4e-18 65.8 0.0 6.6e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637484|ref|YP_007283244.1| - 3.4e-17 62.6 0.0 4.7e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637484|ref|YP_007283244.1| - 3.6e-13 50.1 0.0 5.7e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|433637484|ref|YP_007283244.1| - 1.7e-08 33.8 0.0 2.6e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|433637484|ref|YP_007283244.1| - 4.4e-07 29.5 0.0 7.1e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_24 PF13578.6 gi|433637484|ref|YP_007283244.1| - 1.2e-05 26.2 0.0 2.3e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433637484|ref|YP_007283244.1| - 0.00014 21.5 0.0 0.00021 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|433637484|ref|YP_007283244.1| - 0.00074 19.2 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.11 gi|433637484|ref|YP_007283244.1| - 0.00094 18.8 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 gi|433637484|ref|YP_007283244.1| - 0.0036 16.7 0.0 0.005 16.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TPMT PF05724.11 gi|433637484|ref|YP_007283244.1| - 0.065 12.9 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DREV PF05219.12 gi|433637484|ref|YP_007283244.1| - 0.23 10.5 0.0 0.3 10.1 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase GrpB PF04229.14 gi|433637485|ref|YP_007283245.1| - 1.2e-46 158.9 0.0 1.3e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 GrpB protein Fic_N PF13784.6 gi|433637486|ref|YP_007283246.1| - 3.8e-23 81.3 0.1 7.4e-23 80.4 0.1 1.5 1 0 0 1 1 1 1 Fic/DOC family N-terminal Fic PF02661.18 gi|433637486|ref|YP_007283246.1| - 1.3e-20 74.0 0.0 3.2e-20 72.8 0.0 1.7 1 0 0 1 1 1 1 Fic/DOC family TrmB PF01978.19 gi|433637486|ref|YP_007283246.1| - 0.0016 18.3 0.0 0.0032 17.3 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 gi|433637486|ref|YP_007283246.1| - 0.022 14.8 0.0 0.058 13.4 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix MarR_2 PF12802.7 gi|433637486|ref|YP_007283246.1| - 0.13 12.2 0.1 0.49 10.3 0.0 2.0 2 0 0 2 2 2 0 MarR family Multi_Drug_Res PF00893.19 gi|433637487|ref|YP_007283247.1| - 1.7e-27 95.9 3.3 2.2e-27 95.5 3.3 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein TrmB PF01978.19 gi|433637488|ref|YP_007283248.1| - 3.2e-18 65.4 0.1 9.3e-18 63.9 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|433637488|ref|YP_007283248.1| - 0.057 13.4 0.0 0.54 10.3 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Peptidase_S8 PF00082.22 gi|433637489|ref|YP_007283249.1| - 7.8e-47 160.0 11.4 7.8e-47 160.0 11.4 1.6 2 0 0 2 2 2 1 Subtilase family GPI-anchored PF10342.9 gi|433637489|ref|YP_007283249.1| - 0.0006 20.5 7.6 0.1 13.4 0.9 2.7 2 0 0 2 2 2 2 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family TAT_signal PF10518.9 gi|433637489|ref|YP_007283249.1| - 0.0056 16.5 8.8 0.027 14.3 8.8 2.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Inhibitor_I9 PF05922.16 gi|433637489|ref|YP_007283249.1| - 0.038 14.7 0.0 0.079 13.6 0.0 1.5 1 0 0 1 1 1 0 Peptidase inhibitor I9 PKD PF00801.20 gi|433637489|ref|YP_007283249.1| - 0.064 13.1 3.8 2.3 8.1 0.1 3.8 4 0 0 4 4 4 0 PKD domain TcfC PF16967.5 gi|433637489|ref|YP_007283249.1| - 0.098 12.2 0.0 2.2 7.8 0.0 2.3 2 0 0 2 2 2 0 E-set like domain DUF4625 PF15418.6 gi|433637489|ref|YP_007283249.1| - 0.12 12.6 1.1 2.9 8.2 0.0 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4625) MG2 PF01835.19 gi|433637489|ref|YP_007283249.1| - 0.23 11.9 2.5 7.1 7.2 0.2 3.5 4 0 0 4 4 4 0 MG2 domain DUF5011 PF16403.5 gi|433637489|ref|YP_007283249.1| - 0.42 10.8 5.9 0.35 11.0 0.9 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF5011) Peptidase_S8 PF00082.22 gi|433637490|ref|YP_007283250.1| - 1.2e-46 159.3 15.9 1.2e-46 159.3 15.9 1.6 2 0 0 2 2 2 1 Subtilase family TAT_signal PF10518.9 gi|433637490|ref|YP_007283250.1| - 0.021 14.7 10.2 0.021 14.7 10.2 2.7 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence DUF169 PF02596.15 gi|433637490|ref|YP_007283250.1| - 0.12 12.3 0.2 0.26 11.2 0.2 1.5 1 0 0 1 1 1 0 Uncharacterised ArCR, COG2043 Inhibitor_I9 PF05922.16 gi|433637490|ref|YP_007283250.1| - 0.18 12.5 0.0 0.52 11.0 0.0 1.7 1 0 0 1 1 1 0 Peptidase inhibitor I9 UCR_Fe-S_N PF10399.9 gi|433637490|ref|YP_007283250.1| - 0.26 10.7 5.0 1.2 8.5 5.0 2.2 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SepF PF04472.12 gi|433637491|ref|YP_007283251.1| - 3.4e-13 49.6 1.1 4.6e-13 49.3 1.1 1.2 1 0 0 1 1 1 1 Cell division protein SepF Lar_N PF09861.9 gi|433637491|ref|YP_007283251.1| - 0.065 12.4 0.1 0.084 12.0 0.1 1.2 1 0 0 1 1 1 0 Lactate racemase N-terminal domain HTH_AsnC-type PF13404.6 gi|433637492|ref|YP_007283252.1| - 9.1e-15 54.2 0.5 1.8e-14 53.3 0.5 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|433637492|ref|YP_007283252.1| - 3.8e-14 52.0 0.0 5.5e-14 51.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|433637492|ref|YP_007283252.1| - 1.2e-06 28.4 0.0 2.2e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433637492|ref|YP_007283252.1| - 2.9e-05 23.9 0.1 4e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 MarR family Arc_trans_TRASH PF08394.10 gi|433637492|ref|YP_007283252.1| - 4.2e-05 23.8 2.4 6.2e-05 23.2 2.4 1.3 1 0 0 1 1 1 1 Archaeal TRASH domain HTH_5 PF01022.20 gi|433637492|ref|YP_007283252.1| - 5.1e-05 23.1 0.0 8.2e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family LIM PF00412.22 gi|433637492|ref|YP_007283252.1| - 0.00052 20.2 1.7 0.00085 19.5 1.7 1.3 1 0 0 1 1 1 1 LIM domain HTH_IclR PF09339.10 gi|433637492|ref|YP_007283252.1| - 0.00098 18.9 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|433637492|ref|YP_007283252.1| - 0.0025 17.7 0.0 0.0038 17.1 0.0 1.3 1 0 0 1 1 1 1 MarR family YHS PF04945.13 gi|433637492|ref|YP_007283252.1| - 0.016 15.3 1.5 0.032 14.3 1.5 1.5 1 0 0 1 1 1 0 YHS domain HTH_1 PF00126.27 gi|433637492|ref|YP_007283252.1| - 0.026 14.5 0.0 0.075 13.0 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family ATPase-cat_bd PF12156.8 gi|433637492|ref|YP_007283252.1| - 0.096 13.4 3.6 0.18 12.5 3.6 1.4 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase HTH_11 PF08279.12 gi|433637492|ref|YP_007283252.1| - 0.11 12.5 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 HTH domain Sigma70_r4 PF04545.16 gi|433637492|ref|YP_007283252.1| - 0.11 12.0 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|433637492|ref|YP_007283252.1| - 0.17 12.1 0.0 0.29 11.4 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Ta0938 PF11494.8 gi|433637492|ref|YP_007283252.1| - 0.18 12.1 0.7 0.54 10.6 0.9 1.6 2 0 0 2 2 2 0 Ta0938 Zn-ribbon_8 PF09723.10 gi|433637492|ref|YP_007283252.1| - 3.6 7.8 6.0 29 4.9 3.0 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF678 PF05077.12 gi|433637492|ref|YP_007283252.1| - 5.2 7.3 5.8 3.1 8.0 0.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF678) E1-E2_ATPase PF00122.20 gi|433637493|ref|YP_007283253.1| - 6.7e-49 165.9 0.5 1.8e-48 164.5 0.5 1.8 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433637493|ref|YP_007283253.1| - 2e-48 165.5 6.8 5.1e-48 164.1 6.8 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433637493|ref|YP_007283253.1| - 4.1e-26 91.2 1.7 1.6e-13 50.8 0.0 3.1 3 0 0 3 3 3 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|433637493|ref|YP_007283253.1| - 9.1e-07 28.9 1.1 0.0023 17.7 1.0 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433637493|ref|YP_007283253.1| - 0.00038 20.9 0.2 0.0012 19.3 0.2 1.9 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|433637493|ref|YP_007283253.1| - 0.019 15.0 1.2 0.2 11.8 0.0 3.3 5 1 0 5 5 5 0 Haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433637494|ref|YP_007283254.1| - 6.4e-19 68.2 0.5 7e-19 68.0 0.5 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF302 PF03625.14 gi|433637495|ref|YP_007283255.1| - 1.5e-24 85.7 0.0 2.5e-24 85.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 HSCB_C PF07743.13 gi|433637495|ref|YP_007283255.1| - 0.068 13.7 0.3 0.28 11.7 0.1 2.0 2 1 0 2 2 2 0 HSCB C-terminal oligomerisation domain DBI_PRT PF02277.17 gi|433637495|ref|YP_007283255.1| - 0.094 11.9 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Phosphoribosyltransferase DUF1028 PF06267.12 gi|433637496|ref|YP_007283256.1| - 2.5e-64 216.6 0.2 3e-64 216.4 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF1028) YkyA PF10368.9 gi|433637496|ref|YP_007283256.1| - 0.11 12.2 1.4 0.16 11.6 1.4 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein PUA PF01472.20 gi|433637497|ref|YP_007283257.1| - 2e-15 56.5 1.2 3.5e-15 55.7 1.2 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|433637497|ref|YP_007283257.1| - 0.006 16.8 0.0 0.0088 16.3 0.0 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain DUF1211 PF06736.11 gi|433637498|ref|YP_007283258.1| - 6e-26 90.7 2.4 6e-26 90.7 2.4 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF1211) Gaa1 PF04114.14 gi|433637498|ref|YP_007283258.1| - 0.14 11.1 7.0 0.2 10.6 6.5 1.5 1 1 0 1 1 1 0 Gaa1-like, GPI transamidase component Metallophos_2 PF12850.7 gi|433637499|ref|YP_007283259.1| - 4.1e-09 36.8 0.3 0.0013 18.9 0.0 2.2 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433637499|ref|YP_007283259.1| - 1.3e-05 25.8 0.5 0.0017 18.9 0.1 2.3 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase Flavi_M PF01004.19 gi|433637499|ref|YP_007283259.1| - 0.25 11.1 0.1 0.25 11.1 0.1 3.1 2 1 1 3 3 3 0 Flavivirus envelope glycoprotein M SPC12 PF06645.13 gi|433637499|ref|YP_007283259.1| - 1.5 9.0 4.1 12 6.1 0.2 2.5 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) ABC2_membrane_2 PF12679.7 gi|433637500|ref|YP_007283260.1| - 2.3e-28 99.3 13.7 3e-27 95.7 13.7 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433637500|ref|YP_007283260.1| - 9.1e-06 25.7 3.7 9.1e-06 25.7 3.7 1.4 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433637500|ref|YP_007283260.1| - 6.7e-05 22.5 5.8 6.7e-05 22.5 5.8 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433637500|ref|YP_007283260.1| - 0.00036 19.8 15.2 0.00036 19.8 15.2 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein TssN PF17555.2 gi|433637500|ref|YP_007283260.1| - 7.9 5.8 6.7 4.8 6.5 0.2 2.4 2 0 0 2 2 2 0 Type VI secretion system, TssN ABC_tran PF00005.27 gi|433637501|ref|YP_007283261.1| - 2.8e-27 95.9 0.0 4.8e-27 95.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637501|ref|YP_007283261.1| - 8.1e-13 48.8 0.0 2.6e-07 30.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|433637501|ref|YP_007283261.1| - 8.6e-06 26.4 0.0 4e-05 24.3 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) SMC_N PF02463.19 gi|433637501|ref|YP_007283261.1| - 0.0019 17.7 0.0 0.64 9.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|433637501|ref|YP_007283261.1| - 0.004 16.9 0.0 0.015 15.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433637501|ref|YP_007283261.1| - 0.0056 16.4 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433637501|ref|YP_007283261.1| - 0.01 16.4 0.0 0.017 15.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 gi|433637501|ref|YP_007283261.1| - 0.041 13.4 0.0 0.096 12.2 0.0 1.6 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain IstB_IS21 PF01695.17 gi|433637501|ref|YP_007283261.1| - 0.13 12.0 0.1 8 6.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein RNB PF00773.19 gi|433637502|ref|YP_007283262.1| - 2.8e-80 270.1 0.0 4.7e-79 266.1 0.0 2.0 1 1 0 1 1 1 1 RNB domain HalOD1 PF18545.1 gi|433637503|ref|YP_007283263.1| - 1.6e-15 57.2 0.5 2e-15 56.8 0.5 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 TehB PF03848.14 gi|433637503|ref|YP_007283263.1| - 0.16 11.3 0.0 0.25 10.7 0.0 1.3 1 1 0 1 1 1 0 Tellurite resistance protein TehB HTH_10 PF04967.12 gi|433637504|ref|YP_007283264.1| - 2.1e-17 62.6 0.2 9e-17 60.6 0.1 2.0 2 0 0 2 2 2 1 HTH DNA binding domain BAT PF15915.5 gi|433637504|ref|YP_007283264.1| - 4.8e-12 46.0 0.1 6.4e-12 45.6 0.1 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433637504|ref|YP_007283264.1| - 2.6e-08 33.2 0.0 5.5e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433637504|ref|YP_007283264.1| - 1.3e-05 24.9 0.1 2.9e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433637504|ref|YP_007283264.1| - 0.00019 21.0 0.1 0.00061 19.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|433637504|ref|YP_007283264.1| - 0.00023 20.8 0.0 0.0012 18.4 0.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_AsnC-type PF13404.6 gi|433637504|ref|YP_007283264.1| - 0.0027 17.5 0.3 0.012 15.5 0.4 1.9 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|433637504|ref|YP_007283264.1| - 0.01 15.8 0.1 0.023 14.7 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 gi|433637504|ref|YP_007283264.1| - 0.015 15.3 0.2 0.058 13.5 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix KORA PF16509.5 gi|433637504|ref|YP_007283264.1| - 0.061 13.6 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_Tnp_1_2 PF13022.6 gi|433637504|ref|YP_007283264.1| - 0.066 13.4 0.1 0.93 9.7 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix of insertion element transposase YdaS_antitoxin PF15943.5 gi|433637504|ref|YP_007283264.1| - 0.069 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_28 PF13518.6 gi|433637504|ref|YP_007283264.1| - 0.08 13.1 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|433637504|ref|YP_007283264.1| - 0.12 12.5 0.0 0.33 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain PIN PF01850.21 gi|433637506|ref|YP_007283266.1| - 0.00021 21.8 1.5 0.00024 21.6 1.5 1.1 1 0 0 1 1 1 1 PIN domain MazE_antitoxin PF04014.18 gi|433637507|ref|YP_007283267.1| - 7.2e-07 29.0 0.1 1e-06 28.5 0.1 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|433637507|ref|YP_007283267.1| - 0.0002 21.8 0.0 0.00027 21.3 0.0 1.2 1 1 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin Acetyltransf_1 PF00583.25 gi|433637508|ref|YP_007283268.1| - 3.8e-11 43.2 0.0 5.2e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433637508|ref|YP_007283268.1| - 1.6e-08 34.6 0.0 2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433637508|ref|YP_007283268.1| - 1e-06 29.0 0.0 1.5e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433637508|ref|YP_007283268.1| - 0.00028 20.8 0.0 0.00055 19.8 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 gi|433637508|ref|YP_007283268.1| - 0.021 14.5 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_4 PF13420.7 gi|433637508|ref|YP_007283268.1| - 0.072 13.2 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PGF-CTERM PF18204.1 gi|433637509|ref|YP_007283269.1| - 0.019 14.9 5.8 0.019 14.9 5.8 2.2 2 0 0 2 2 2 0 PGF-CTERM motif CE2_N PF17996.1 gi|433637509|ref|YP_007283269.1| - 0.24 11.4 4.2 4.6 7.3 0.0 3.7 2 1 1 4 4 4 0 Carbohydrate esterase 2 N-terminal NapD PF03927.13 gi|433637509|ref|YP_007283269.1| - 3 8.0 9.9 1 9.5 1.6 3.8 3 1 1 4 4 4 0 NapD protein PfkB PF00294.24 gi|433637510|ref|YP_007283270.1| - 6.8e-49 166.8 0.0 8.1e-49 166.5 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RTC PF01137.21 gi|433637511|ref|YP_007283271.1| - 2.5e-63 213.3 0.0 3.4e-63 212.8 0.0 1.1 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|433637511|ref|YP_007283271.1| - 4.9e-11 43.1 0.7 8.5e-11 42.3 0.7 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain MutL_C PF08676.11 gi|433637512|ref|YP_007283272.1| - 5.6e-35 120.3 0.0 8.4e-35 119.7 0.0 1.3 1 0 0 1 1 1 1 MutL C terminal dimerisation domain DNA_mis_repair PF01119.19 gi|433637512|ref|YP_007283272.1| - 2.2e-31 108.0 0.0 3.5e-31 107.3 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain HATPase_c_3 PF13589.6 gi|433637512|ref|YP_007283272.1| - 5.5e-13 48.9 0.0 9.5e-13 48.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|433637512|ref|YP_007283272.1| - 1.2e-05 25.7 0.0 2.7e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1421 PF07223.11 gi|433637512|ref|YP_007283272.1| - 0.066 13.0 0.0 0.28 11.1 0.0 2.1 1 0 0 1 1 1 0 UBA-like domain (DUF1421) Polysacc_deac_1 PF01522.21 gi|433637513|ref|YP_007283273.1| - 3e-15 56.2 0.0 4.6e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|433637513|ref|YP_007283273.1| - 0.00033 20.4 0.1 0.001 18.8 0.1 1.8 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Asparaginase PF00710.20 gi|433637514|ref|YP_007283274.1| - 2.7e-51 173.8 1.0 6.9e-51 172.5 0.0 1.9 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|433637514|ref|YP_007283274.1| - 5.7e-21 74.9 0.5 1.2e-20 73.8 0.5 1.5 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain Peripla_BP_4 PF13407.6 gi|433637514|ref|YP_007283274.1| - 0.0017 18.0 0.1 0.0037 16.9 0.1 1.5 1 0 0 1 1 1 1 Periplasmic binding protein domain adh_short_C2 PF13561.6 gi|433637515|ref|YP_007283275.1| - 6.4e-63 212.4 0.7 7.7e-63 212.2 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433637515|ref|YP_007283275.1| - 2.8e-59 199.9 0.3 3.9e-59 199.4 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433637515|ref|YP_007283275.1| - 3e-13 50.1 0.1 3.7e-13 49.8 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433637515|ref|YP_007283275.1| - 0.00045 19.8 0.0 0.0068 15.9 0.0 2.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 gi|433637515|ref|YP_007283275.1| - 0.032 13.6 0.0 0.076 12.3 0.0 1.7 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MutS_V PF00488.21 gi|433637516|ref|YP_007283276.1| - 2.4e-86 288.6 0.0 5.2e-86 287.5 0.0 1.6 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 gi|433637516|ref|YP_007283276.1| - 4.5e-34 118.3 4.6 7.4e-34 117.6 4.6 1.4 1 0 0 1 1 1 1 MutS domain III MutS_I PF01624.20 gi|433637516|ref|YP_007283276.1| - 1e-26 93.4 0.0 2e-26 92.4 0.0 1.5 1 0 0 1 1 1 1 MutS domain I MutS_IV PF05190.18 gi|433637516|ref|YP_007283276.1| - 1.3e-25 89.5 0.1 2.9e-25 88.4 0.1 1.6 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|433637516|ref|YP_007283276.1| - 4.3e-18 65.9 0.0 1.2e-17 64.5 0.0 1.7 1 0 0 1 1 1 1 MutS domain II DUF824 PF05688.11 gi|433637516|ref|YP_007283276.1| - 0.038 13.8 0.0 0.1 12.5 0.0 1.7 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) APG6_N PF17675.1 gi|433637516|ref|YP_007283276.1| - 0.041 14.4 1.9 0.12 12.9 1.9 1.8 1 0 0 1 1 1 0 Apg6 coiled-coil region HisKA_7TM PF16927.5 gi|433637517|ref|YP_007283277.1| - 5.8e-48 163.8 13.9 7.8e-48 163.4 13.9 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|433637517|ref|YP_007283277.1| - 1.5e-15 57.7 0.0 2.6e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|433637517|ref|YP_007283277.1| - 3.4e-13 49.4 0.3 7.2e-13 48.4 0.3 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|433637517|ref|YP_007283277.1| - 3.6e-10 40.1 1.2 4.1e-08 33.4 1.2 2.6 1 1 0 1 1 1 1 PAS fold PAS PF00989.25 gi|433637517|ref|YP_007283277.1| - 5e-09 36.2 0.0 2.1e-08 34.2 0.0 2.0 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|433637517|ref|YP_007283277.1| - 8.7e-06 25.6 0.1 2.6e-05 24.1 0.1 1.8 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|433637517|ref|YP_007283277.1| - 0.0013 19.0 0.0 0.0036 17.5 0.0 1.8 1 1 0 1 1 1 1 PAS domain DUF3253 PF11625.8 gi|433637517|ref|YP_007283277.1| - 0.15 12.3 0.7 0.43 10.8 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3253) HATPase_c_2 PF13581.6 gi|433637517|ref|YP_007283277.1| - 0.21 11.6 0.8 0.37 10.8 0.1 1.7 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain DUF202 PF02656.15 gi|433637517|ref|YP_007283277.1| - 2.7 8.5 8.9 19 5.8 1.6 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF202) HisKA_7TM PF16927.5 gi|433637518|ref|YP_007283278.1| - 1.1e-42 146.6 23.8 1.4e-42 146.3 23.8 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|433637518|ref|YP_007283278.1| - 9.1e-14 51.9 0.1 1.8e-13 51.0 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|433637518|ref|YP_007283278.1| - 4.1e-12 46.0 0.4 9.7e-12 44.7 0.2 1.8 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|433637518|ref|YP_007283278.1| - 2e-09 37.6 0.8 8.4e-08 32.4 0.8 2.7 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|433637518|ref|YP_007283278.1| - 1.5e-08 34.4 0.1 4.6e-08 32.9 0.1 1.8 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|433637518|ref|YP_007283278.1| - 4.1e-06 26.8 0.1 0.00016 21.6 0.1 2.5 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|433637518|ref|YP_007283278.1| - 5.2e-05 23.4 0.0 0.00014 22.1 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 gi|433637518|ref|YP_007283278.1| - 0.0026 17.9 0.2 0.033 14.3 0.2 2.4 1 1 0 1 1 1 1 PAS fold tRNA_bind PF01588.20 gi|433637519|ref|YP_007283279.1| - 8.3e-11 41.9 0.0 9.5e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain Phos_pyr_kin PF08543.12 gi|433637520|ref|YP_007283280.1| - 5.6e-81 271.5 6.2 6.4e-80 268.1 6.2 1.9 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|433637520|ref|YP_007283280.1| - 5.3e-06 26.0 2.1 0.00014 21.2 0.0 2.2 2 0 0 2 2 2 2 pfkB family carbohydrate kinase HK PF02110.15 gi|433637520|ref|YP_007283280.1| - 0.0062 16.0 2.9 0.71 9.2 0.1 2.7 2 1 1 3 3 3 2 Hydroxyethylthiazole kinase family Carb_kinase PF01256.17 gi|433637520|ref|YP_007283280.1| - 2.1 7.8 8.1 2.2 7.7 3.7 2.4 2 1 0 2 2 2 0 Carbohydrate kinase Aminotran_5 PF00266.19 gi|433637521|ref|YP_007283281.1| - 1.5e-18 66.9 0.0 2e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|433637521|ref|YP_007283281.1| - 0.0039 16.4 0.0 0.0062 15.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II BMC PF00936.19 gi|433637521|ref|YP_007283281.1| - 1.6 8.8 4.9 87 3.2 0.0 3.6 4 0 0 4 4 4 0 BMC domain DUF4056 PF13265.6 gi|433637523|ref|YP_007283283.1| - 0.012 15.0 0.0 3.7 6.8 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4056) DUF3215 PF11503.8 gi|433637523|ref|YP_007283283.1| - 0.075 12.9 0.4 7.3 6.5 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3215) Big_1 PF02369.16 gi|433637523|ref|YP_007283283.1| - 0.22 11.6 24.3 0.087 12.8 1.9 6.6 7 0 0 7 7 7 0 Bacterial Ig-like domain (group 1) DUF4082 PF13313.6 gi|433637523|ref|YP_007283283.1| - 0.24 11.5 1.8 23 5.0 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4082) DUF4307 PF14155.6 gi|433637523|ref|YP_007283283.1| - 2.6 7.9 7.2 23 4.8 1.9 3.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4307) Invasin_D3 PF09134.10 gi|433637523|ref|YP_007283283.1| - 6.5 7.1 23.7 0.8 10.1 1.7 5.8 4 2 0 6 6 6 0 Invasin, domain 3 5_nucleotid_C PF02872.18 gi|433637524|ref|YP_007283284.1| - 4.6e-12 46.4 0.0 3.3e-11 43.7 0.0 2.1 1 1 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 gi|433637524|ref|YP_007283284.1| - 1e-06 29.4 0.0 1.5e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Peptidase_M28 PF04389.17 gi|433637525|ref|YP_007283285.1| - 2.9e-31 108.7 0.5 4.2e-31 108.2 0.5 1.2 1 0 0 1 1 1 1 Peptidase family M28 PA PF02225.22 gi|433637525|ref|YP_007283285.1| - 2e-14 53.4 0.0 4e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 PA domain Peptidase_M20 PF01546.28 gi|433637525|ref|YP_007283285.1| - 2.1e-05 24.3 0.6 0.00023 20.9 0.6 2.1 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 gi|433637525|ref|YP_007283285.1| - 3.1e-05 23.1 0.2 5.1e-05 22.4 0.2 1.3 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase ECH_1 PF00378.20 gi|433637527|ref|YP_007283287.1| - 4.8e-44 150.5 0.1 5.8e-44 150.3 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433637527|ref|YP_007283287.1| - 9.1e-35 120.7 0.1 1.1e-34 120.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|433637527|ref|YP_007283287.1| - 0.14 12.1 0.0 0.48 10.4 0.0 1.8 2 0 0 2 2 2 0 Peptidase family S49 NAD_synthase PF02540.17 gi|433637528|ref|YP_007283288.1| - 7.4e-81 270.8 0.0 8.8e-81 270.6 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|433637528|ref|YP_007283288.1| - 3.2e-06 26.2 0.0 0.00073 18.4 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|433637528|ref|YP_007283288.1| - 0.0017 18.1 0.1 0.0025 17.5 0.1 1.3 1 0 0 1 1 1 1 Asparagine synthase HTH_Tnp_ISL3 PF13542.6 gi|433637528|ref|YP_007283288.1| - 0.017 14.5 0.1 0.076 12.4 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 QueC PF06508.13 gi|433637528|ref|YP_007283288.1| - 0.023 14.2 0.0 0.097 12.1 0.0 1.9 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC HTH_Tnp_1 PF01527.20 gi|433637528|ref|YP_007283288.1| - 0.042 14.1 0.0 0.12 12.7 0.0 1.8 1 0 0 1 1 1 0 Transposase HTH_28 PF13518.6 gi|433637528|ref|YP_007283288.1| - 0.078 13.1 0.0 0.4 10.8 0.0 2.2 2 1 1 3 3 3 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|433637528|ref|YP_007283288.1| - 0.12 12.2 0.0 0.57 10.1 0.0 2.1 1 1 1 2 2 2 0 Homeodomain-like domain LPD22 PF18834.1 gi|433637528|ref|YP_007283288.1| - 0.12 12.6 1.0 2.1 8.6 0.0 2.8 3 0 0 3 3 3 0 Large polyvalent protein associated domain 22 Big_3_5 PF16640.5 gi|433637529|ref|YP_007283289.1| - 0.045 13.9 4.9 0.92 9.7 0.1 2.7 3 1 0 3 3 3 0 Bacterial Ig-like domain (group 3) Phage_sheath_1N PF17481.2 gi|433637529|ref|YP_007283289.1| - 0.1 13.1 0.9 0.19 12.2 0.9 1.9 1 1 0 1 1 1 0 Phage tail sheath protein beta-sandwich domain TBP PF00352.21 gi|433637530|ref|YP_007283290.1| - 1.6e-56 188.2 0.0 5.1e-28 96.9 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) T4bSS_IcmS PF12608.8 gi|433637530|ref|YP_007283290.1| - 2e-05 24.8 0.0 0.01 16.1 0.0 2.2 2 0 0 2 2 2 2 Type IVb secretion, IcmS, effector-recruitment DUF3378 PF11858.8 gi|433637530|ref|YP_007283290.1| - 0.00057 20.0 0.0 1.5 9.0 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF192 PF02643.15 gi|433637530|ref|YP_007283290.1| - 0.17 12.0 0.0 0.72 10.0 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized ACR, COG1430 UPF0020 PF01170.18 gi|433637531|ref|YP_007283291.1| - 1.8e-23 83.3 0.0 1.1e-22 80.6 0.0 2.2 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|433637531|ref|YP_007283291.1| - 2.7e-06 28.0 0.0 8.2e-06 26.4 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 gi|433637531|ref|YP_007283291.1| - 2.4e-05 23.9 0.0 0.0073 15.8 0.0 2.2 2 0 0 2 2 2 2 RRNA methyltransferase AviRa Methyltransf_11 PF08241.12 gi|433637531|ref|YP_007283291.1| - 8.8e-05 23.1 0.0 0.00026 21.6 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|433637531|ref|YP_007283291.1| - 0.019 14.6 0.0 0.085 12.6 0.0 1.8 2 0 0 2 2 2 0 DNA methylase Methyltransf_31 PF13847.6 gi|433637531|ref|YP_007283291.1| - 0.027 14.3 0.0 0.046 13.5 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain THUMP PF02926.17 gi|433637531|ref|YP_007283291.1| - 0.034 14.2 0.0 0.055 13.6 0.0 1.2 1 0 0 1 1 1 0 THUMP domain N6_Mtase PF02384.16 gi|433637531|ref|YP_007283291.1| - 0.046 13.0 0.0 0.066 12.5 0.0 1.3 1 1 0 1 1 1 0 N-6 DNA Methylase Methyltransf_15 PF09445.10 gi|433637531|ref|YP_007283291.1| - 0.19 11.3 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase 4HBT PF03061.22 gi|433637533|ref|YP_007283293.1| - 2.7e-17 62.9 0.1 5.3e-17 61.9 0.1 1.4 1 0 0 1 1 1 1 Thioesterase superfamily AAA PF00004.29 gi|433637534|ref|YP_007283294.1| - 2.5e-13 50.6 0.1 7.3e-13 49.1 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|433637534|ref|YP_007283294.1| - 5.4e-11 42.5 0.0 1.8e-10 40.8 0.0 1.8 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 gi|433637534|ref|YP_007283294.1| - 8.9e-09 35.6 0.3 2e-08 34.5 0.1 1.7 2 0 0 2 2 1 1 Replication factor C C-terminal domain AAA_22 PF13401.6 gi|433637534|ref|YP_007283294.1| - 9.4e-09 35.7 0.0 2.7e-08 34.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|433637534|ref|YP_007283294.1| - 2.2e-05 25.0 0.0 6.4e-05 23.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|433637534|ref|YP_007283294.1| - 3.4e-05 23.6 0.0 0.0037 17.0 0.0 2.9 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|433637534|ref|YP_007283294.1| - 7.4e-05 23.2 1.0 0.00051 20.5 0.2 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|433637534|ref|YP_007283294.1| - 0.00014 21.9 0.0 0.00032 20.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|433637534|ref|YP_007283294.1| - 0.00014 21.9 0.4 0.0013 18.8 0.1 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|433637534|ref|YP_007283294.1| - 0.00047 19.6 0.0 0.00083 18.8 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|433637534|ref|YP_007283294.1| - 0.0021 18.0 0.0 0.0097 15.8 0.0 2.0 1 1 0 1 1 1 1 NACHT domain Zeta_toxin PF06414.12 gi|433637534|ref|YP_007283294.1| - 0.0025 17.1 0.0 0.0075 15.6 0.0 1.7 2 0 0 2 2 2 1 Zeta toxin AAA_19 PF13245.6 gi|433637534|ref|YP_007283294.1| - 0.0037 17.6 0.1 0.043 14.1 0.0 2.3 2 1 0 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|433637534|ref|YP_007283294.1| - 0.004 17.3 0.0 0.033 14.3 0.0 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain T2SSE PF00437.20 gi|433637534|ref|YP_007283294.1| - 0.0046 16.1 0.0 0.0094 15.0 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein IstB_IS21 PF01695.17 gi|433637534|ref|YP_007283294.1| - 0.01 15.5 0.0 0.064 13.0 0.0 2.2 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_11 PF13086.6 gi|433637534|ref|YP_007283294.1| - 0.012 15.4 0.0 0.032 14.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|433637534|ref|YP_007283294.1| - 0.012 15.8 0.0 0.027 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433637534|ref|YP_007283294.1| - 0.026 14.2 0.0 0.076 12.7 0.0 1.9 2 1 0 2 2 2 0 AAA domain Tnp_P_element_C PF12596.8 gi|433637534|ref|YP_007283294.1| - 0.064 13.8 0.0 0.15 12.6 0.0 1.6 1 0 0 1 1 1 0 87kDa Transposase TsaE PF02367.17 gi|433637534|ref|YP_007283294.1| - 0.12 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNA_pol3_delta PF06144.13 gi|433637534|ref|YP_007283294.1| - 0.15 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Metal_resist PF13801.6 gi|433637534|ref|YP_007283294.1| - 0.17 12.1 3.8 0.36 11.0 0.8 2.4 2 0 0 2 2 2 0 Heavy-metal resistance CARDB PF07705.11 gi|433637535|ref|YP_007283295.1| - 2e-06 28.0 0.6 0.00014 22.1 0.0 2.5 2 0 0 2 2 2 2 CARDB Colicin_E5 PF12106.8 gi|433637535|ref|YP_007283295.1| - 0.096 13.0 0.1 2.3 8.6 0.0 2.5 2 0 0 2 2 2 0 Colicin E5 ribonuclease domain Lactamase_B_2 PF12706.7 gi|433637536|ref|YP_007283296.1| - 2.5e-20 72.9 3.0 2.9e-09 36.7 0.2 2.2 1 1 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433637536|ref|YP_007283296.1| - 4e-13 49.8 5.5 2.4e-11 44.0 5.5 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RmlD_sub_bind PF04321.17 gi|433637536|ref|YP_007283296.1| - 0.0046 16.1 0.9 0.0065 15.6 0.9 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Lactamase_B_4 PF13691.6 gi|433637536|ref|YP_007283296.1| - 0.023 14.4 0.0 0.069 12.8 0.0 1.8 2 0 0 2 2 2 0 tRNase Z endonuclease DUF5437 PF17505.2 gi|433637536|ref|YP_007283296.1| - 0.024 14.7 0.0 0.056 13.5 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5437) RMMBL PF07521.12 gi|433637536|ref|YP_007283296.1| - 0.073 13.0 0.1 0.2 11.6 0.1 1.7 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain MtrH PF02007.18 gi|433637536|ref|YP_007283296.1| - 0.14 11.2 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit Alanine_zipper PF11839.8 gi|433637536|ref|YP_007283296.1| - 0.27 11.6 8.0 0.5 10.8 8.0 1.3 1 0 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein DUF460 PF04312.13 gi|433637537|ref|YP_007283297.1| - 1.4e-48 164.2 0.6 4e-48 162.7 0.3 2.0 2 0 0 2 2 1 1 Protein of unknown function (DUF460) ATG16 PF08614.11 gi|433637537|ref|YP_007283297.1| - 0.0001 22.6 10.2 0.00022 21.5 10.2 1.5 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) acVLRF1 PF18859.1 gi|433637537|ref|YP_007283297.1| - 0.00039 20.7 3.7 0.00039 20.7 3.7 5.2 4 2 1 5 5 3 1 Actinobacteria/chloroflexi VLRF1 release factor DUF4407 PF14362.6 gi|433637537|ref|YP_007283297.1| - 0.0017 17.8 8.2 0.0017 17.8 8.2 1.9 2 0 0 2 2 1 1 Domain of unknown function (DUF4407) TMF_DNA_bd PF12329.8 gi|433637537|ref|YP_007283297.1| - 0.0019 18.2 1.3 0.0019 18.2 1.3 3.0 2 1 1 3 3 3 1 TATA element modulatory factor 1 DNA binding FAM76 PF16046.5 gi|433637537|ref|YP_007283297.1| - 0.0021 17.5 0.9 0.0032 16.9 0.9 1.3 1 0 0 1 1 1 1 FAM76 protein BLOC1_2 PF10046.9 gi|433637537|ref|YP_007283297.1| - 0.005 17.1 3.2 0.046 14.0 0.6 2.6 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 MAD PF05557.13 gi|433637537|ref|YP_007283297.1| - 0.0051 15.2 10.4 0.0082 14.6 10.4 1.2 1 0 0 1 1 1 1 Mitotic checkpoint protein LPP PF04728.13 gi|433637537|ref|YP_007283297.1| - 0.0084 16.5 7.2 0.02 15.3 1.5 3.0 2 0 0 2 2 2 1 Lipoprotein leucine-zipper AAA_13 PF13166.6 gi|433637537|ref|YP_007283297.1| - 0.0099 14.6 3.2 0.015 14.0 3.2 1.2 1 0 0 1 1 1 1 AAA domain HMMR_N PF15905.5 gi|433637537|ref|YP_007283297.1| - 0.01 15.4 9.1 0.021 14.3 9.1 1.4 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Laminin_I PF06008.14 gi|433637537|ref|YP_007283297.1| - 0.013 15.2 3.9 0.023 14.4 3.9 1.3 1 0 0 1 1 1 0 Laminin Domain I Spc7 PF08317.11 gi|433637537|ref|YP_007283297.1| - 0.017 14.0 9.5 0.034 13.0 9.5 1.5 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 gi|433637537|ref|YP_007283297.1| - 0.023 14.3 0.9 0.043 13.4 0.9 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit PI3K_P85_iSH2 PF16454.5 gi|433637537|ref|YP_007283297.1| - 0.03 13.9 5.7 0.066 12.8 5.7 1.6 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF2968 PF11180.8 gi|433637537|ref|YP_007283297.1| - 0.03 13.9 10.3 0.089 12.4 10.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Baculo_PEP_C PF04513.12 gi|433637537|ref|YP_007283297.1| - 0.041 13.9 0.1 0.085 12.9 0.1 1.5 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Laminin_II PF06009.12 gi|433637537|ref|YP_007283297.1| - 0.083 12.9 4.0 0.23 11.5 4.0 1.7 1 0 0 1 1 1 0 Laminin Domain II CLZ PF16526.5 gi|433637537|ref|YP_007283297.1| - 0.094 13.1 10.8 0.23 11.8 1.5 3.1 1 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Vac_Fusion PF02346.16 gi|433637537|ref|YP_007283297.1| - 0.1 12.2 0.4 0.3 10.8 0.4 1.8 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 DUF724 PF05266.14 gi|433637537|ref|YP_007283297.1| - 0.13 12.0 5.9 0.3 10.9 5.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF16 PF01519.16 gi|433637537|ref|YP_007283297.1| - 0.15 12.6 4.2 0.16 12.5 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 Synaptobrevin PF00957.21 gi|433637537|ref|YP_007283297.1| - 0.17 11.7 2.2 0.33 10.8 2.1 1.6 1 1 0 1 1 1 0 Synaptobrevin CENP-F_leu_zip PF10473.9 gi|433637537|ref|YP_007283297.1| - 0.25 11.4 15.9 0.14 12.2 12.7 2.1 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Herpes_UL6 PF01763.16 gi|433637537|ref|YP_007283297.1| - 0.29 9.6 2.5 0.47 8.9 2.5 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like ZapB PF06005.12 gi|433637537|ref|YP_007283297.1| - 0.34 11.4 13.1 0.99 9.9 3.2 2.7 1 1 1 2 2 2 0 Cell division protein ZapB DUF1664 PF07889.12 gi|433637537|ref|YP_007283297.1| - 0.39 10.8 4.2 1.7 8.7 4.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 gi|433637537|ref|YP_007283297.1| - 0.39 11.3 12.2 13 6.4 12.2 2.7 1 1 0 1 1 1 0 SlyX TMF_TATA_bd PF12325.8 gi|433637537|ref|YP_007283297.1| - 0.41 10.9 20.1 0.23 11.7 3.0 2.7 2 1 1 3 3 2 0 TATA element modulatory factor 1 TATA binding FlaC_arch PF05377.11 gi|433637537|ref|YP_007283297.1| - 0.47 10.9 2.9 8.3 6.9 0.6 2.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) V_ATPase_I PF01496.19 gi|433637537|ref|YP_007283297.1| - 0.49 8.2 3.5 0.71 7.7 3.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fez1 PF06818.15 gi|433637537|ref|YP_007283297.1| - 0.64 10.4 10.8 0.52 10.7 8.5 2.0 2 0 0 2 2 1 0 Fez1 XhlA PF10779.9 gi|433637537|ref|YP_007283297.1| - 0.65 10.2 14.9 0.39 10.9 2.3 2.9 3 0 0 3 3 2 0 Haemolysin XhlA GAS PF13851.6 gi|433637537|ref|YP_007283297.1| - 0.77 9.1 10.8 0.92 8.8 8.7 2.0 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding TPR_MLP1_2 PF07926.12 gi|433637537|ref|YP_007283297.1| - 0.83 9.7 17.2 0.87 9.7 11.8 3.0 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Spc29 PF17082.5 gi|433637537|ref|YP_007283297.1| - 0.85 9.4 7.5 2.8 7.7 2.7 2.3 1 1 1 2 2 2 0 Spindle Pole Component 29 DUF1635 PF07795.11 gi|433637537|ref|YP_007283297.1| - 0.93 9.3 4.1 1.8 8.4 4.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) YabA PF06156.13 gi|433637537|ref|YP_007283297.1| - 1.3 9.7 3.1 3.5 8.3 3.1 1.7 1 0 0 1 1 1 0 Initiation control protein YabA ADIP PF11559.8 gi|433637537|ref|YP_007283297.1| - 1.4 9.0 12.3 0.8 9.8 3.3 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF5082 PF16888.5 gi|433637537|ref|YP_007283297.1| - 1.4 9.2 9.1 5 7.4 0.2 2.8 3 0 0 3 3 2 0 Domain of unknown function (DUF5082) NPV_P10 PF05531.12 gi|433637537|ref|YP_007283297.1| - 1.5 9.3 6.2 1.8 9.1 2.5 2.8 2 1 0 2 2 1 0 Nucleopolyhedrovirus P10 protein CENP-Q PF13094.6 gi|433637537|ref|YP_007283297.1| - 1.8 8.7 16.9 23 5.1 16.8 2.8 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Atg14 PF10186.9 gi|433637537|ref|YP_007283297.1| - 2.5 7.1 8.2 4.2 6.4 8.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cortex-I_coil PF09304.10 gi|433637537|ref|YP_007283297.1| - 2.6 8.3 12.4 1.1 9.6 6.6 2.9 2 1 1 3 3 3 0 Cortexillin I, coiled coil Ax_dynein_light PF10211.9 gi|433637537|ref|YP_007283297.1| - 3.5 7.5 13.4 0.26 11.2 8.0 1.9 2 0 0 2 2 1 0 Axonemal dynein light chain DUF641 PF04859.12 gi|433637537|ref|YP_007283297.1| - 4.5 7.6 9.5 1 9.7 1.9 3.5 2 1 2 4 4 4 0 Plant protein of unknown function (DUF641) CorA PF01544.18 gi|433637537|ref|YP_007283297.1| - 5.8 6.1 5.9 11 5.3 5.9 1.4 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Tropomyosin_1 PF12718.7 gi|433637537|ref|YP_007283297.1| - 6 7.0 23.7 0.68 10.1 16.0 3.0 3 1 0 3 3 2 0 Tropomyosin like TRAF_BIRC3_bd PF16673.5 gi|433637537|ref|YP_007283297.1| - 6.3 6.7 11.6 1.6 8.5 2.3 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Spc24 PF08286.11 gi|433637537|ref|YP_007283297.1| - 7.1 6.9 9.8 7.7 6.8 2.9 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Phage_GP20 PF06810.11 gi|433637537|ref|YP_007283297.1| - 7.2 6.4 11.6 15 5.4 5.4 3.5 3 1 0 3 3 2 0 Phage minor structural protein GP20 PKcGMP_CC PF16808.5 gi|433637537|ref|YP_007283297.1| - 7.8 6.5 10.4 2.2 8.2 1.1 3.1 2 1 1 3 3 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase UPF0242 PF06785.11 gi|433637537|ref|YP_007283297.1| - 7.8 6.6 11.4 15 5.6 11.4 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus bZIP_1 PF00170.21 gi|433637537|ref|YP_007283297.1| - 7.9 6.7 17.0 0.68 10.1 2.8 3.2 2 1 1 3 3 2 0 bZIP transcription factor ABC_tran_CTD PF16326.5 gi|433637537|ref|YP_007283297.1| - 9.3 6.6 16.7 0.14 12.5 5.3 3.4 4 0 0 4 4 3 0 ABC transporter C-terminal domain TMEM125 PF15109.6 gi|433637538|ref|YP_007283298.1| - 0.0017 18.7 2.2 0.0018 18.6 2.2 1.0 1 0 0 1 1 1 1 TMEM125 protein family DUF2627 PF11118.8 gi|433637538|ref|YP_007283298.1| - 1.7 9.3 10.9 1.4 9.5 2.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) DUF373 PF04123.13 gi|433637538|ref|YP_007283298.1| - 4 6.8 7.5 4.4 6.7 7.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) eIF-1a PF01176.19 gi|433637539|ref|YP_007283299.1| - 4.6e-24 84.0 0.2 5.7e-24 83.7 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Sclerostin PF05463.11 gi|433637539|ref|YP_007283299.1| - 0.019 14.7 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Sclerostin (SOST) ChapFlgA_N PF17656.1 gi|433637539|ref|YP_007283299.1| - 0.025 14.7 0.0 0.049 13.8 0.0 1.5 2 0 0 2 2 2 0 FlgA N-terminal domain zinc_ribbon_5 PF13719.6 gi|433637539|ref|YP_007283299.1| - 0.083 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Na_H_antiporter PF03553.14 gi|433637540|ref|YP_007283300.1| - 1.7e-35 122.8 45.2 4.1e-18 65.7 25.0 2.2 2 0 0 2 2 2 2 Na+/H+ antiporter family RPA43_OB PF17875.1 gi|433637541|ref|YP_007283301.1| - 0.13 12.9 0.1 0.16 12.6 0.1 1.1 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I Aminotran_5 PF00266.19 gi|433637542|ref|YP_007283302.1| - 7.2e-28 97.6 0.0 9.2e-28 97.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V eIF-5_eIF-2B PF01873.17 gi|433637542|ref|YP_007283302.1| - 0.072 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain found in IF2B/IF5 TipAS PF07739.13 gi|433637542|ref|YP_007283302.1| - 0.35 11.4 3.0 10 6.7 0.4 3.2 2 1 1 3 3 3 0 TipAS antibiotic-recognition domain Copper-bind PF00127.20 gi|433637543|ref|YP_007283303.1| - 1.5e-06 28.6 0.0 2.9e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TAT_signal PF10518.9 gi|433637543|ref|YP_007283303.1| - 2.4e-05 24.0 3.7 4.1e-05 23.2 3.7 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence MatE PF01554.18 gi|433637544|ref|YP_007283304.1| - 2.6e-53 179.9 37.6 4.8e-32 110.9 11.7 2.8 2 1 1 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|433637544|ref|YP_007283304.1| - 0.0021 18.2 10.1 0.0021 18.2 10.1 5.9 4 4 0 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433637544|ref|YP_007283304.1| - 0.077 11.6 26.8 0.0042 15.7 8.2 3.0 1 1 0 2 2 2 0 Lipid II flippase MurJ NAD_binding_2 PF03446.15 gi|433637545|ref|YP_007283305.1| - 5.5e-37 127.4 0.0 7.6e-37 126.9 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 6PGD PF00393.19 gi|433637545|ref|YP_007283305.1| - 1.1e-23 84.1 0.0 1.5e-23 83.6 0.0 1.3 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain F420_oxidored PF03807.17 gi|433637545|ref|YP_007283305.1| - 1.8e-05 25.2 0.0 2.9e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|433637545|ref|YP_007283305.1| - 7.3e-05 22.7 0.1 0.00011 22.2 0.1 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433637545|ref|YP_007283305.1| - 0.00028 21.1 0.1 0.0006 20.1 0.0 1.5 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|433637545|ref|YP_007283305.1| - 0.00041 19.8 0.0 0.00056 19.3 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_11 PF14833.6 gi|433637545|ref|YP_007283305.1| - 0.0006 20.0 0.5 0.0029 17.9 0.0 2.3 2 1 1 3 3 3 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|433637545|ref|YP_007283305.1| - 0.077 12.6 0.0 0.24 10.9 0.1 1.7 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|433637545|ref|YP_007283305.1| - 0.12 12.0 0.0 0.37 10.4 0.0 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA CopD PF05425.13 gi|433637547|ref|YP_007283307.1| - 3.9e-06 27.2 9.2 3.9e-06 27.2 9.2 2.0 2 1 0 2 2 2 1 Copper resistance protein D YdjM PF04307.14 gi|433637548|ref|YP_007283308.1| - 0.0045 16.3 19.9 0.067 12.5 19.9 2.3 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase dUTPase PF00692.19 gi|433637549|ref|YP_007283309.1| - 2.1e-11 43.6 0.0 2.9e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|433637549|ref|YP_007283309.1| - 0.12 11.1 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Aconitase PF00330.20 gi|433637550|ref|YP_007283310.1| - 9.7e-109 364.4 1.6 6.5e-107 358.4 1.6 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|433637550|ref|YP_007283310.1| - 1.5e-20 73.8 0.0 2.9e-20 72.9 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain DUF521 PF04412.13 gi|433637550|ref|YP_007283310.1| - 0.0067 15.2 0.0 0.0094 14.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Barwin PF00967.17 gi|433637550|ref|YP_007283310.1| - 0.1 12.5 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Barwin family DUF2244 PF10003.9 gi|433637552|ref|YP_007283312.1| - 0.011 15.4 0.6 0.025 14.3 0.2 1.8 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DUF2207 PF09972.9 gi|433637552|ref|YP_007283312.1| - 0.026 13.3 0.0 0.026 13.3 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HTH_20 PF12840.7 gi|433637552|ref|YP_007283312.1| - 0.073 13.1 0.1 0.3 11.2 0.1 2.2 1 1 0 1 1 1 0 Helix-turn-helix domain DUF1102 PF06510.11 gi|433637553|ref|YP_007283313.1| - 3.1e-05 24.2 0.2 4.4e-05 23.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1102) DUF1102 PF06510.11 gi|433637554|ref|YP_007283314.1| - 0.11 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1102) Peptidase_S24 PF00717.23 gi|433637556|ref|YP_007283316.1| - 7.9e-06 25.7 0.1 1.9e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 Peptidase S24-like GHMP_kinases_N PF00288.26 gi|433637556|ref|YP_007283316.1| - 0.088 13.1 4.1 0.74 10.1 0.2 2.7 2 0 0 2 2 2 0 GHMP kinases N terminal domain DUF5305 PF17231.2 gi|433637557|ref|YP_007283317.1| - 1.2e-49 168.7 0.0 2.5e-49 167.7 0.0 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Glyoxalase PF00903.25 gi|433637558|ref|YP_007283318.1| - 2.1e-16 60.3 0.0 2.7e-10 40.5 0.0 2.4 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433637558|ref|YP_007283318.1| - 1.3e-11 45.3 0.6 5e-09 36.9 0.3 2.3 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase_4 PF13669.6 gi|433637558|ref|YP_007283318.1| - 0.0097 16.2 0.1 5 7.4 0.0 2.9 2 2 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|433637558|ref|YP_007283318.1| - 0.029 14.5 1.1 0.91 9.6 0.3 3.0 2 2 1 3 3 3 0 Glyoxalase-like domain Beta-Casp PF10996.8 gi|433637559|ref|YP_007283319.1| - 1.2e-11 44.9 0.0 2e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.27 gi|433637559|ref|YP_007283319.1| - 1.5e-09 38.2 6.3 5.3e-09 36.4 6.3 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|433637559|ref|YP_007283319.1| - 2.4e-09 37.0 0.2 2.2e-08 33.9 0.0 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|433637559|ref|YP_007283319.1| - 4.7e-07 29.5 0.7 1.1e-06 28.3 0.4 1.8 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|433637559|ref|YP_007283319.1| - 2.2e-06 27.2 0.0 4.2e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433637559|ref|YP_007283319.1| - 0.044 13.7 0.1 0.18 11.7 0.1 2.0 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Peptidase_M48 PF01435.18 gi|433637560|ref|YP_007283320.1| - 4.7e-37 127.7 0.0 9.1e-23 81.0 0.0 2.1 2 0 0 2 2 2 2 Peptidase family M48 Peptidase_M56 PF05569.11 gi|433637560|ref|YP_007283320.1| - 0.00014 21.2 0.0 0.0011 18.3 0.0 2.0 2 0 0 2 2 2 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|433637560|ref|YP_007283320.1| - 0.0081 16.0 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 SprT-like family Helo_like_N PF17111.5 gi|433637560|ref|YP_007283320.1| - 0.02 14.3 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins LRR19-TM PF15176.6 gi|433637560|ref|YP_007283320.1| - 0.16 11.9 0.0 0.39 10.7 0.0 1.7 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Ribosomal_S6e PF01092.19 gi|433637563|ref|YP_007283323.1| - 4.1e-41 139.9 0.1 4.6e-41 139.7 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e PadR PF03551.14 gi|433637564|ref|YP_007283324.1| - 7.8e-09 35.4 0.0 1.8e-08 34.2 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Arch_fla_DE PF04659.13 gi|433637565|ref|YP_007283325.1| - 1.7e-23 82.3 0.0 2.4e-23 81.8 0.0 1.2 1 0 0 1 1 1 1 Archaeal flagella protein Allexi_40kDa PF05549.11 gi|433637565|ref|YP_007283325.1| - 0.036 13.6 0.0 0.045 13.3 0.0 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein T2SSF PF00482.23 gi|433637566|ref|YP_007283326.1| - 5.5e-14 52.2 3.9 1.5e-12 47.5 2.3 4.2 4 1 1 5 5 5 2 Type II secretion system (T2SS), protein F Anoctamin PF04547.12 gi|433637566|ref|YP_007283326.1| - 0.03 13.2 1.9 0.09 11.6 0.1 2.4 2 0 0 2 2 2 0 Calcium-activated chloride channel AAA_32 PF13654.6 gi|433637566|ref|YP_007283326.1| - 0.055 12.3 0.3 0.1 11.4 0.3 1.3 1 0 0 1 1 1 0 AAA domain DUF2706 PF10913.8 gi|433637566|ref|YP_007283326.1| - 2 8.3 5.9 2.1 8.3 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2706) T2SSE PF00437.20 gi|433637567|ref|YP_007283327.1| - 9.4e-44 149.5 0.0 1.4e-43 149.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 gi|433637567|ref|YP_007283327.1| - 0.0026 18.2 0.0 0.019 15.3 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|433637567|ref|YP_007283327.1| - 0.006 16.3 0.0 0.023 14.5 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433637567|ref|YP_007283327.1| - 0.026 14.8 0.0 0.078 13.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|433637567|ref|YP_007283327.1| - 0.034 13.7 0.0 0.079 12.5 0.0 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region Glyco_transf_20 PF00982.21 gi|433637567|ref|YP_007283327.1| - 0.045 12.4 0.0 0.075 11.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 20 Microtub_bd PF16796.5 gi|433637567|ref|YP_007283327.1| - 0.22 11.5 0.0 0.46 10.4 0.0 1.5 1 0 0 1 1 1 0 Microtubule binding ATPase PF06745.13 gi|433637568|ref|YP_007283328.1| - 1.6e-18 66.9 0.0 2.7e-18 66.2 0.0 1.3 1 1 0 1 1 1 1 KaiC Rad51 PF08423.11 gi|433637568|ref|YP_007283328.1| - 5.8e-07 29.0 0.2 1.6e-06 27.5 0.2 1.6 1 1 0 1 1 1 1 Rad51 AAA_16 PF13191.6 gi|433637568|ref|YP_007283328.1| - 1.3e-05 25.7 0.0 1.9e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|433637568|ref|YP_007283328.1| - 5.9e-05 22.7 0.0 9.3e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 gi|433637568|ref|YP_007283328.1| - 0.00098 18.7 0.2 0.0022 17.5 0.2 1.7 1 1 0 1 1 1 1 recA bacterial DNA recombination protein NACHT PF05729.12 gi|433637568|ref|YP_007283328.1| - 0.0024 17.8 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 gi|433637568|ref|YP_007283328.1| - 0.0061 17.0 0.0 0.016 15.6 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PAXNEB PF05625.11 gi|433637568|ref|YP_007283328.1| - 0.07 12.3 0.1 1.1 8.3 0.1 2.0 2 0 0 2 2 2 0 PAXNEB protein AAA_5 PF07728.14 gi|433637568|ref|YP_007283328.1| - 0.092 12.7 0.0 0.17 11.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|433637568|ref|YP_007283328.1| - 0.15 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 gi|433637568|ref|YP_007283328.1| - 0.16 12.1 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|433637568|ref|YP_007283328.1| - 0.18 12.3 0.1 0.76 10.3 0.0 1.9 1 1 0 2 2 2 0 ABC transporter Arch_flagellin PF01917.16 gi|433637569|ref|YP_007283329.1| - 8.2e-24 84.6 2.3 9.1e-24 84.5 2.3 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin CARDB PF07705.11 gi|433637569|ref|YP_007283329.1| - 0.0061 16.8 0.0 0.0092 16.2 0.0 1.3 1 0 0 1 1 1 1 CARDB UPF0086 PF01868.16 gi|433637569|ref|YP_007283329.1| - 0.062 13.2 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function UPF0086 Arch_flagellin PF01917.16 gi|433637570|ref|YP_007283330.1| - 8.8e-08 32.5 1.4 1e-07 32.3 1.4 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin CARDB PF07705.11 gi|433637570|ref|YP_007283330.1| - 0.019 15.2 0.5 0.026 14.8 0.5 1.4 1 1 0 1 1 1 0 CARDB Arch_fla_DE PF04659.13 gi|433637571|ref|YP_007283331.1| - 1.3e-25 89.1 0.0 2.3e-25 88.3 0.0 1.5 1 0 0 1 1 1 1 Archaeal flagella protein FlaC_arch PF05377.11 gi|433637571|ref|YP_007283331.1| - 1.2e-16 60.9 0.1 2.4e-16 59.9 0.1 1.6 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) GAT PF03127.14 gi|433637571|ref|YP_007283331.1| - 0.0019 18.5 0.6 0.0049 17.1 0.6 1.7 1 0 0 1 1 1 1 GAT domain Spectrin PF00435.21 gi|433637571|ref|YP_007283331.1| - 0.19 12.2 0.9 1.4 9.4 0.1 2.5 2 0 0 2 2 2 0 Spectrin repeat Arch_flagellin PF01917.16 gi|433637572|ref|YP_007283332.1| - 4.2e-37 127.8 15.1 4.9e-37 127.6 15.1 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Reovirus_M2 PF05993.12 gi|433637573|ref|YP_007283333.1| - 0.07 11.2 0.1 0.083 11.0 0.1 1.0 1 0 0 1 1 1 0 Reovirus major virion structural protein Mu-1/Mu-1C (M2) Peptidase_S9 PF00326.21 gi|433637577|ref|YP_007283337.1| - 1.2e-43 149.0 0.2 1.9e-43 148.4 0.2 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|433637577|ref|YP_007283337.1| - 2.8e-12 46.8 2.2 7.5e-06 25.7 2.6 2.3 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) PD40 PF07676.12 gi|433637577|ref|YP_007283337.1| - 1.2e-10 41.1 0.1 0.0071 16.3 0.0 5.5 6 0 0 6 6 6 3 WD40-like Beta Propeller Repeat Pectate_lyase22 PF14583.6 gi|433637577|ref|YP_007283337.1| - 4e-06 25.8 0.4 0.13 10.9 0.2 3.9 2 1 2 4 4 4 2 Oligogalacturonate lyase DPPIV_N PF00930.21 gi|433637577|ref|YP_007283337.1| - 2.4e-05 23.3 0.1 0.16 10.7 0.0 2.9 1 1 2 3 3 3 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|433637577|ref|YP_007283337.1| - 0.00034 20.0 0.0 0.0044 16.3 0.0 2.4 2 1 1 3 3 3 1 Domain of unknown function (DUF5050) Hydrolase_4 PF12146.8 gi|433637577|ref|YP_007283337.1| - 0.00051 19.4 0.5 0.017 14.4 0.8 2.3 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Kelch_3 PF13415.6 gi|433637577|ref|YP_007283337.1| - 0.0034 17.6 1.2 32 5.0 0.0 4.8 5 0 0 5 5 5 0 Galactose oxidase, central domain Peptidase_S9_N PF02897.15 gi|433637577|ref|YP_007283337.1| - 0.0067 15.3 0.2 0.022 13.6 0.2 1.9 1 1 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Abhydrolase_1 PF00561.20 gi|433637577|ref|YP_007283337.1| - 0.0072 16.0 1.9 0.089 12.4 0.9 2.1 1 1 0 2 2 2 1 alpha/beta hydrolase fold TruB_C PF09142.11 gi|433637577|ref|YP_007283337.1| - 0.018 14.8 0.1 3.4 7.5 0.1 3.8 3 1 1 4 4 4 0 tRNA Pseudouridine synthase II, C terminal AXE1 PF05448.12 gi|433637577|ref|YP_007283337.1| - 0.039 12.6 0.2 4.2 5.9 0.0 2.2 2 0 0 2 2 2 0 Acetyl xylan esterase (AXE1) DLH PF01738.18 gi|433637577|ref|YP_007283337.1| - 0.06 12.9 0.0 0.7 9.4 0.0 2.0 2 0 0 2 2 2 0 Dienelactone hydrolase family DHHA1 PF02272.19 gi|433637578|ref|YP_007283338.1| - 0.019 15.4 0.0 0.044 14.2 0.0 1.8 1 0 0 1 1 1 0 DHHA1 domain Usp PF00582.26 gi|433637579|ref|YP_007283339.1| - 3.3e-32 111.9 5.1 3.8e-32 111.7 5.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|433637579|ref|YP_007283339.1| - 0.025 14.6 0.3 0.03 14.3 0.3 1.2 1 0 0 1 1 1 0 DNA photolyase Usp PF00582.26 gi|433637580|ref|YP_007283340.1| - 2.5e-15 57.2 5.1 5.5e-15 56.1 5.1 1.5 1 1 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.24 gi|433637580|ref|YP_007283340.1| - 0.014 14.8 0.1 0.049 13.1 0.1 1.8 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel SMODS PF18144.1 gi|433637580|ref|YP_007283340.1| - 0.057 13.6 0.0 0.08 13.1 0.0 1.2 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Acetyltransf_1 PF00583.25 gi|433637581|ref|YP_007283341.1| - 2.3e-13 50.4 0.0 3.3e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433637581|ref|YP_007283341.1| - 9.9e-10 38.7 0.0 1.6e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433637581|ref|YP_007283341.1| - 9.5e-09 35.3 0.0 1.5e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433637581|ref|YP_007283341.1| - 0.00011 22.0 0.0 0.00019 21.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|433637581|ref|YP_007283341.1| - 0.00022 21.9 0.0 0.00032 21.4 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|433637581|ref|YP_007283341.1| - 0.014 15.6 0.0 0.02 15.0 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Usp PF00582.26 gi|433637582|ref|YP_007283342.1| - 1.5e-13 51.4 0.2 7.2e-12 46.0 0.2 2.0 1 1 0 1 1 1 1 Universal stress protein family SKG6 PF08693.10 gi|433637583|ref|YP_007283343.1| - 0.047 13.1 2.4 0.094 12.1 0.1 2.1 2 0 0 2 2 2 0 Transmembrane alpha-helix domain ATPase_gene1 PF09527.10 gi|433637583|ref|YP_007283343.1| - 0.068 13.3 6.9 0.078 13.2 6.9 1.1 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF1269 PF06897.12 gi|433637583|ref|YP_007283343.1| - 0.86 9.9 8.0 1.1 9.6 8.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1269) Romo1 PF10247.9 gi|433637583|ref|YP_007283343.1| - 4.5 7.7 10.6 15 6.0 4.2 2.1 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Big_3_5 PF16640.5 gi|433637585|ref|YP_007283345.1| - 0.0096 16.1 0.9 0.019 15.1 0.9 1.5 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 3) UCR_Fe-S_N PF10399.9 gi|433637585|ref|YP_007283345.1| - 0.55 9.6 6.1 0.99 8.8 6.1 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF1427 PF07235.11 gi|433637586|ref|YP_007283346.1| - 0.017 15.0 1.6 0.017 15.0 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1427) YbjQ_1 PF01906.17 gi|433637587|ref|YP_007283347.1| - 7e-36 123.0 3.9 7.6e-36 122.9 3.9 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF4156 PF13698.6 gi|433637587|ref|YP_007283347.1| - 0.051 13.9 0.2 0.068 13.5 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4156) DJ-1_PfpI PF01965.24 gi|433637588|ref|YP_007283348.1| - 5.7e-12 45.8 0.7 4.2e-10 39.7 0.7 2.2 1 1 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|433637588|ref|YP_007283348.1| - 1.9e-09 37.5 0.0 4.2e-09 36.4 0.0 1.6 1 1 0 1 1 1 1 ThiJ/PfpI family-like PAS_4 PF08448.10 gi|433637589|ref|YP_007283349.1| - 2.3e-23 82.6 13.1 2.9e-15 56.5 0.4 4.9 5 1 0 5 5 5 2 PAS fold HATPase_c PF02518.26 gi|433637589|ref|YP_007283349.1| - 1.2e-18 67.6 0.0 2.5e-18 66.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|433637589|ref|YP_007283349.1| - 3e-18 66.0 0.0 1.1e-07 32.0 0.0 2.6 2 0 0 2 2 2 2 PAS domain Response_reg PF00072.24 gi|433637589|ref|YP_007283349.1| - 4.3e-15 55.9 0.1 9.3e-15 54.8 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.25 gi|433637589|ref|YP_007283349.1| - 7.8e-15 54.9 0.0 4.6e-10 39.5 0.0 2.9 2 0 0 2 2 2 2 PAS fold GAF_2 PF13185.6 gi|433637589|ref|YP_007283349.1| - 5.9e-12 46.1 7.2 1.8e-11 44.5 0.8 3.4 3 1 0 3 3 3 1 GAF domain HisKA PF00512.25 gi|433637589|ref|YP_007283349.1| - 6e-12 45.4 0.3 6e-12 45.4 0.3 3.3 3 1 1 4 4 4 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.12 gi|433637589|ref|YP_007283349.1| - 6.7e-11 42.3 0.0 5.2e-06 26.7 0.0 3.6 4 0 0 4 4 4 2 PAS fold GAF_3 PF13492.6 gi|433637589|ref|YP_007283349.1| - 1.1e-08 35.5 0.2 6.9e-08 32.9 0.0 2.3 2 0 0 2 2 2 1 GAF domain PAS_8 PF13188.7 gi|433637589|ref|YP_007283349.1| - 3.1e-08 33.4 0.2 1.3e-06 28.3 0.0 3.4 3 0 0 3 3 2 1 PAS domain PAS_7 PF12860.7 gi|433637589|ref|YP_007283349.1| - 1.9e-05 24.8 0.0 0.041 14.1 0.0 3.3 2 1 0 2 2 2 2 PAS fold HATPase_c_2 PF13581.6 gi|433637589|ref|YP_007283349.1| - 0.0001 22.3 0.0 0.00034 20.6 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain OKR_DC_1_N PF03709.15 gi|433637589|ref|YP_007283349.1| - 0.0051 17.1 0.1 0.013 15.8 0.1 1.7 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain GAF PF01590.26 gi|433637589|ref|YP_007283349.1| - 0.019 15.6 0.0 0.081 13.6 0.0 2.1 1 0 0 1 1 1 0 GAF domain HATPase_c_5 PF14501.6 gi|433637589|ref|YP_007283349.1| - 0.02 14.8 0.0 0.46 10.4 0.0 2.4 2 0 0 2 2 2 0 GHKL domain RNase_P_pop3 PF08228.11 gi|433637589|ref|YP_007283349.1| - 0.053 13.6 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 RNase P subunit Pop3 PAS_11 PF14598.6 gi|433637589|ref|YP_007283349.1| - 0.059 13.5 0.0 0.35 11.0 0.0 2.1 2 0 0 2 2 2 0 PAS domain BCCT PF02028.17 gi|433637592|ref|YP_007283352.1| - 7.7e-132 440.2 43.4 8.7e-132 440.0 43.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF3671 PF12420.8 gi|433637592|ref|YP_007283352.1| - 0.92 9.6 2.1 1.3 9.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function Acetyltransf_1 PF00583.25 gi|433637593|ref|YP_007283353.1| - 1.6e-12 47.7 0.0 1.8e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433637593|ref|YP_007283353.1| - 2.3e-08 34.4 0.0 3.3e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433637593|ref|YP_007283353.1| - 3.1e-07 30.4 0.0 4.2e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433637593|ref|YP_007283353.1| - 0.092 13.4 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433637593|ref|YP_007283353.1| - 0.16 12.1 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MarR_2 PF12802.7 gi|433637594|ref|YP_007283354.1| - 3.1e-11 43.0 2.5 1.4e-06 28.0 0.3 2.7 3 0 0 3 3 3 2 MarR family TrmB PF01978.19 gi|433637594|ref|YP_007283354.1| - 2.9e-07 30.3 0.1 0.0016 18.3 0.0 2.5 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|433637594|ref|YP_007283354.1| - 6.1e-07 29.8 0.9 8.1e-06 26.2 0.3 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|433637594|ref|YP_007283354.1| - 8.2e-07 28.7 2.1 0.048 13.5 0.0 3.2 3 0 0 3 3 3 2 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|433637594|ref|YP_007283354.1| - 1.3e-06 28.7 0.0 0.057 13.8 0.0 2.4 2 0 0 2 2 2 2 Transcriptional regulator MarR PF01047.22 gi|433637594|ref|YP_007283354.1| - 4.4e-06 26.5 0.0 0.0086 16.0 0.0 2.4 2 0 0 2 2 2 2 MarR family HTH_24 PF13412.6 gi|433637594|ref|YP_007283354.1| - 1e-05 25.0 0.2 0.013 15.1 0.1 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|433637594|ref|YP_007283354.1| - 2.5e-05 24.2 0.0 0.038 14.0 0.0 2.4 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|433637594|ref|YP_007283354.1| - 3.2e-05 23.9 1.4 0.17 12.0 0.6 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain GntR PF00392.21 gi|433637594|ref|YP_007283354.1| - 0.00014 21.5 0.6 0.31 10.7 0.0 2.7 3 0 0 3 3 3 2 Bacterial regulatory proteins, gntR family Penicillinase_R PF03965.16 gi|433637594|ref|YP_007283354.1| - 0.00032 21.0 0.0 0.51 10.7 0.0 2.4 2 0 0 2 2 2 2 Penicillinase repressor HTH_29 PF13551.6 gi|433637594|ref|YP_007283354.1| - 0.0004 20.4 0.1 0.13 12.3 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn helix DUF4423 PF14394.6 gi|433637594|ref|YP_007283354.1| - 0.012 15.3 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_28 PF13518.6 gi|433637594|ref|YP_007283354.1| - 0.017 15.2 0.0 3.3 7.9 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain Crp PF00325.20 gi|433637594|ref|YP_007283354.1| - 0.018 14.7 2.3 0.48 10.1 0.6 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family HTH_5 PF01022.20 gi|433637594|ref|YP_007283354.1| - 0.022 14.6 0.0 8.9 6.3 0.1 2.6 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF742 PF05331.11 gi|433637594|ref|YP_007283354.1| - 0.068 13.0 0.0 9.8 6.0 0.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF742) PaaX PF07848.12 gi|433637594|ref|YP_007283354.1| - 0.12 12.6 0.1 0.46 10.7 0.0 2.0 2 0 0 2 2 2 0 PaaX-like protein HTH_23 PF13384.6 gi|433637594|ref|YP_007283354.1| - 0.13 12.1 0.1 2.1 8.2 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain DUF4157 PF13699.6 gi|433637595|ref|YP_007283355.1| - 2e-31 108.1 0.8 7.8e-31 106.2 0.8 2.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) TT_ORF2a PF08197.11 gi|433637595|ref|YP_007283355.1| - 0.0043 17.0 0.0 0.021 14.8 0.0 2.2 2 0 0 2 2 2 1 pORF2a truncated protein Peptidase_M91 PF14891.6 gi|433637595|ref|YP_007283355.1| - 0.021 15.1 0.1 0.049 13.9 0.1 1.6 1 0 0 1 1 1 0 Effector protein Phasin PF05597.11 gi|433637595|ref|YP_007283355.1| - 0.11 12.5 7.0 0.24 11.4 3.9 3.1 2 1 2 4 4 4 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Mst1_SARAH PF11629.8 gi|433637595|ref|YP_007283355.1| - 2.4 8.3 6.5 10 6.3 1.8 2.6 2 0 0 2 2 2 0 C terminal SARAH domain of Mst1 HAD PF12710.7 gi|433637596|ref|YP_007283356.1| - 0.019 15.4 0.1 0.1 13.0 0.0 2.1 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase QueC PF06508.13 gi|433637600|ref|YP_007283360.1| - 1.3e-63 214.3 0.0 1.7e-63 213.9 0.0 1.1 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|433637600|ref|YP_007283360.1| - 5.9e-05 22.7 0.0 0.00077 19.1 0.0 2.3 3 0 0 3 3 3 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|433637600|ref|YP_007283360.1| - 0.0029 17.3 0.8 0.0039 16.9 0.8 1.2 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|433637600|ref|YP_007283360.1| - 0.005 15.7 0.0 0.007 15.2 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|433637600|ref|YP_007283360.1| - 0.12 11.5 0.0 0.23 10.5 0.0 1.4 2 0 0 2 2 2 0 NAD synthase TrmB PF01978.19 gi|433637601|ref|YP_007283361.1| - 5.2e-07 29.5 0.0 1.4e-06 28.1 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|433637601|ref|YP_007283361.1| - 1.3e-06 28.1 0.2 2.6e-06 27.1 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433637601|ref|YP_007283361.1| - 0.0034 17.2 0.0 0.0063 16.4 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.9 gi|433637601|ref|YP_007283361.1| - 0.04 14.0 0.0 0.068 13.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.7 gi|433637601|ref|YP_007283361.1| - 0.07 13.2 0.1 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Dioxygenase_C PF00775.21 gi|433637601|ref|YP_007283361.1| - 0.079 12.4 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Dioxygenase TrmB PF01978.19 gi|433637602|ref|YP_007283362.1| - 0.00052 19.9 0.0 0.00096 19.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433637602|ref|YP_007283362.1| - 0.014 15.3 0.1 0.03 14.2 0.1 1.6 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|433637602|ref|YP_007283362.1| - 0.042 13.8 0.0 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 HTH domain Penicillinase_R PF03965.16 gi|433637602|ref|YP_007283362.1| - 0.11 12.9 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Penicillinase repressor Peptidase_S8 PF00082.22 gi|433637604|ref|YP_007283364.1| - 1.1e-45 156.2 9.4 2.2e-45 155.2 9.4 1.4 1 0 0 1 1 1 1 Subtilase family PKD PF00801.20 gi|433637604|ref|YP_007283364.1| - 6.4e-11 41.9 0.5 6.4e-11 41.9 0.5 2.9 4 0 0 4 4 4 1 PKD domain TAT_signal PF10518.9 gi|433637604|ref|YP_007283364.1| - 0.0013 18.5 3.5 0.0013 18.5 3.5 2.3 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence Peptidase_S8 PF00082.22 gi|433637605|ref|YP_007283365.1| - 6e-49 166.9 8.8 1.1e-48 166.0 8.8 1.4 1 0 0 1 1 1 1 Subtilase family PKD PF00801.20 gi|433637605|ref|YP_007283365.1| - 2.4e-10 40.1 1.4 2.4e-10 40.1 1.4 2.8 3 0 0 3 3 3 1 PKD domain TAT_signal PF10518.9 gi|433637605|ref|YP_007283365.1| - 0.0004 20.1 0.8 0.0004 20.1 0.8 2.4 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence Metallophos_2 PF12850.7 gi|433637606|ref|YP_007283366.1| - 7.1e-14 52.3 0.0 5.6e-06 26.7 0.0 2.2 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433637606|ref|YP_007283366.1| - 3.7e-07 30.9 0.6 1.1e-05 26.1 0.5 2.1 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase MS_channel PF00924.18 gi|433637607|ref|YP_007283367.1| - 2.1e-45 154.8 0.0 3.3e-45 154.2 0.0 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel ABC_export PF16962.5 gi|433637607|ref|YP_007283367.1| - 0.19 10.1 11.9 0.25 9.8 11.9 1.0 1 0 0 1 1 1 0 Putative ABC exporter IncE PF17627.2 gi|433637607|ref|YP_007283367.1| - 1.5 8.9 9.3 1.3 9.1 8.2 1.5 1 1 0 1 1 1 0 Inclusion membrane protein E Usp PF00582.26 gi|433637608|ref|YP_007283368.1| - 4.3e-32 111.6 4.0 4.8e-32 111.4 4.0 1.0 1 0 0 1 1 1 1 Universal stress protein family IspD PF01128.19 gi|433637608|ref|YP_007283368.1| - 0.0032 17.3 0.4 0.0046 16.7 0.3 1.4 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase zf-C2H2_9 PF16293.5 gi|433637609|ref|YP_007283369.1| - 0.14 12.0 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) HSP20 PF00011.21 gi|433637611|ref|YP_007283371.1| - 0.0029 17.7 0.1 1.5 9.0 0.0 2.1 1 1 1 2 2 2 2 Hsp20/alpha crystallin family ABC_tran PF00005.27 gi|433637612|ref|YP_007283372.1| - 1.6e-27 96.7 0.0 2.4e-27 96.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637612|ref|YP_007283372.1| - 8.8e-14 52.0 0.6 3.3e-06 27.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637612|ref|YP_007283372.1| - 0.00023 20.7 0.0 0.19 11.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|433637612|ref|YP_007283372.1| - 0.00027 21.4 0.0 0.00044 20.7 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|433637612|ref|YP_007283372.1| - 0.0015 19.0 0.0 0.0016 19.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433637612|ref|YP_007283372.1| - 0.0044 16.8 0.2 0.011 15.5 0.2 1.7 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433637612|ref|YP_007283372.1| - 0.014 15.8 0.1 0.033 14.6 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|433637612|ref|YP_007283372.1| - 0.017 14.8 0.1 0.033 13.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433637612|ref|YP_007283372.1| - 0.021 15.1 0.0 0.041 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|433637612|ref|YP_007283372.1| - 0.033 13.8 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|433637612|ref|YP_007283372.1| - 0.052 13.3 0.0 0.066 12.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433637612|ref|YP_007283372.1| - 0.08 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|433637612|ref|YP_007283372.1| - 0.084 13.0 0.0 0.13 12.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|433637612|ref|YP_007283372.1| - 0.13 10.9 0.0 0.18 10.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|433637612|ref|YP_007283372.1| - 0.16 11.5 0.2 0.25 10.9 0.2 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|433637612|ref|YP_007283372.1| - 0.18 12.4 0.2 0.94 10.0 0.2 2.1 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|433637612|ref|YP_007283372.1| - 0.21 9.1 0.4 0.32 8.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NB-ARC PF00931.22 gi|433637612|ref|YP_007283372.1| - 0.28 10.3 0.0 0.49 9.5 0.0 1.5 1 1 0 1 1 1 0 NB-ARC domain ABC2_membrane_3 PF12698.7 gi|433637613|ref|YP_007283373.1| - 8.1e-12 44.9 2.8 1.5e-11 44.0 2.8 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|433637613|ref|YP_007283373.1| - 1.2e-08 34.7 14.0 2.4e-07 30.4 13.5 2.2 2 0 0 2 2 2 1 ABC-2 type transporter CcmH PF03918.14 gi|433637613|ref|YP_007283373.1| - 6.2 6.1 5.5 0.8 9.0 0.1 2.2 3 0 0 3 3 3 0 Cytochrome C biogenesis protein Helicase_PWI PF18149.1 gi|433637614|ref|YP_007283374.1| - 0.0042 17.2 0.1 0.01 16.0 0.1 1.6 1 0 0 1 1 1 1 N-terminal helicase PWI domain DsbD_2 PF13386.6 gi|433637615|ref|YP_007283375.1| - 2.3e-48 164.8 16.5 3.6e-48 164.2 16.5 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2182 PF09948.9 gi|433637615|ref|YP_007283375.1| - 2.9 7.7 7.5 5.9 6.7 0.3 2.8 3 0 0 3 3 3 0 Predicted metal-binding integral membrane protein (DUF2182) Glycos_transf_2 PF00535.26 gi|433637616|ref|YP_007283376.1| - 7.2e-22 78.0 0.1 1.5e-11 44.4 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433637616|ref|YP_007283376.1| - 1.6e-06 28.2 0.5 0.038 13.9 0.3 2.2 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|433637616|ref|YP_007283376.1| - 0.079 13.5 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 Hairpins PF04877.12 gi|433637616|ref|YP_007283376.1| - 2.2 7.8 7.7 0.05 13.2 0.9 1.6 2 0 0 2 2 2 0 HrpZ DUF373 PF04123.13 gi|433637616|ref|YP_007283376.1| - 3.3 7.1 4.5 1.3 8.4 1.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Epimerase_2 PF02350.19 gi|433637617|ref|YP_007283377.1| - 9.6e-101 337.1 0.0 1.5e-100 336.5 0.0 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase baeRF_family2 PF18844.1 gi|433637617|ref|YP_007283377.1| - 0.0079 16.3 1.3 0.0079 16.3 1.3 3.0 3 0 0 3 3 3 1 Bacterial archaeo-eukaryotic release factor family 2 DUF2334 PF10096.9 gi|433637618|ref|YP_007283378.1| - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_transf_4 PF13439.6 gi|433637619|ref|YP_007283379.1| - 2.6e-06 27.5 0.1 4.8e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 DUF354 PF04007.12 gi|433637619|ref|YP_007283379.1| - 3.9e-06 26.2 0.0 0.0064 15.6 0.0 2.8 3 0 0 3 3 3 2 Protein of unknown function (DUF354) Glyco_transf_28 PF03033.20 gi|433637619|ref|YP_007283379.1| - 0.013 15.5 0.0 0.032 14.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Glyco_trans_4_4 PF13579.6 gi|433637619|ref|YP_007283379.1| - 0.25 11.8 13.5 0.023 15.1 6.5 2.8 2 1 0 2 2 2 0 Glycosyl transferase 4-like domain Polysacc_deac_1 PF01522.21 gi|433637620|ref|YP_007283380.1| - 1.1e-24 86.7 0.0 2e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Polysacc_synt PF01943.17 gi|433637621|ref|YP_007283381.1| - 1.6e-33 116.3 9.8 1.6e-33 116.3 9.8 2.3 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|433637621|ref|YP_007283381.1| - 1.4e-27 96.7 0.4 1.4e-27 96.7 0.4 2.7 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433637621|ref|YP_007283381.1| - 7.6e-19 68.2 19.4 7.6e-19 68.2 19.4 3.5 3 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|433637621|ref|YP_007283381.1| - 3.4e-08 33.3 1.0 3.4e-08 33.3 1.0 3.3 2 2 1 3 3 3 1 MatE MurJ PF03023.14 gi|433637621|ref|YP_007283381.1| - 2.2e-07 29.9 17.5 4.6e-07 28.8 16.9 1.7 1 1 1 2 2 2 1 Lipid II flippase MurJ CARDB PF07705.11 gi|433637624|ref|YP_007283384.1| - 0.0016 18.7 1.3 0.066 13.5 0.1 2.6 2 0 0 2 2 2 1 CARDB ASH PF15780.5 gi|433637624|ref|YP_007283384.1| - 0.037 14.2 0.1 3.4 7.9 0.0 2.7 1 1 2 3 3 3 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF11 PF01345.18 gi|433637624|ref|YP_007283384.1| - 0.29 11.5 4.9 34 4.8 0.0 3.4 4 1 0 4 4 4 0 Domain of unknown function DUF11 PMT_2 PF13231.6 gi|433637625|ref|YP_007283385.1| - 2e-07 31.4 18.4 2e-07 31.4 18.4 3.5 3 0 0 3 3 3 2 Dolichyl-phosphate-mannose-protein mannosyltransferase MotA_ExbB PF01618.16 gi|433637625|ref|YP_007283385.1| - 0.48 10.2 3.3 0.56 10.0 0.2 2.6 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family DUF1616 PF07760.11 gi|433637626|ref|YP_007283386.1| - 7.7e-69 232.3 4.8 9.9e-69 231.9 4.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CbiQ PF02361.16 gi|433637626|ref|YP_007283386.1| - 1.9 8.1 10.1 3.4 7.2 10.1 1.3 1 0 0 1 1 1 0 Cobalt transport protein Formyl_trans_N PF00551.19 gi|433637627|ref|YP_007283387.1| - 1.7e-09 37.7 0.0 2.4e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Polysacc_deac_1 PF01522.21 gi|433637628|ref|YP_007283388.1| - 7.2e-07 29.2 0.0 1.9e-06 27.8 0.0 1.7 1 0 0 1 1 1 1 Polysaccharide deacetylase CSD PF00313.22 gi|433637629|ref|YP_007283389.1| - 4e-17 61.8 0.0 5.3e-17 61.4 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain S1-like PF14444.6 gi|433637629|ref|YP_007283389.1| - 0.12 12.4 1.4 0.28 11.1 1.4 1.7 1 1 0 1 1 1 0 S1-like DZR PF12773.7 gi|433637630|ref|YP_007283390.1| - 0.0012 18.8 9.2 0.32 11.0 9.2 2.8 1 1 0 1 1 1 1 Double zinc ribbon Zn_Tnp_IS1 PF03811.13 gi|433637630|ref|YP_007283390.1| - 0.017 14.8 0.1 0.017 14.8 0.1 3.0 4 0 0 4 4 4 0 InsA N-terminal domain Zn-ribbon_8 PF09723.10 gi|433637630|ref|YP_007283390.1| - 0.094 12.9 9.6 0.13 12.4 1.7 3.2 1 1 1 2 2 2 0 Zinc ribbon domain zf-CHY PF05495.12 gi|433637630|ref|YP_007283390.1| - 0.096 13.2 3.9 0.45 11.1 3.8 1.8 1 1 0 1 1 1 0 CHY zinc finger CoiA PF06054.11 gi|433637630|ref|YP_007283390.1| - 0.16 11.1 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 Competence protein CoiA-like family TF_Zn_Ribbon PF08271.12 gi|433637630|ref|YP_007283390.1| - 0.19 11.3 8.7 13 5.4 0.3 3.9 2 1 2 4 4 4 0 TFIIB zinc-binding RNHCP PF12647.7 gi|433637630|ref|YP_007283390.1| - 0.2 11.7 0.3 0.2 11.7 0.3 2.4 2 1 1 3 3 3 0 RNHCP domain zf-C4_Topoisom PF01396.19 gi|433637630|ref|YP_007283390.1| - 0.23 11.2 2.7 0.49 10.2 0.0 2.5 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ACC PF17848.1 gi|433637630|ref|YP_007283390.1| - 0.32 11.1 8.7 15 5.8 0.1 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-LITAF-like PF10601.9 gi|433637630|ref|YP_007283390.1| - 0.42 10.9 5.0 8 6.8 0.0 3.0 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf_UBZ PF18439.1 gi|433637630|ref|YP_007283390.1| - 0.7 9.5 8.2 2.8 7.6 0.1 3.7 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-piccolo PF05715.13 gi|433637630|ref|YP_007283390.1| - 0.75 10.0 9.4 42 4.4 0.0 2.8 1 1 0 2 2 2 0 Piccolo Zn-finger UPF0547 PF10571.9 gi|433637630|ref|YP_007283390.1| - 1.2 9.3 12.7 0.63 10.2 3.2 3.0 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|433637630|ref|YP_007283390.1| - 2 7.9 8.9 34 4.0 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain CrgA PF06781.12 gi|433637631|ref|YP_007283391.1| - 2.3 8.4 7.8 1.1 9.3 4.5 2.2 1 1 1 2 2 2 0 Cell division protein CrgA DUF3267 PF11667.8 gi|433637632|ref|YP_007283392.1| - 5.5e-10 39.5 0.1 5.5e-10 39.5 0.1 2.1 2 0 0 2 2 2 1 Putative zincin peptidase DUF1799 PF08809.11 gi|433637632|ref|YP_007283392.1| - 0.1 12.8 0.0 0.2 11.9 0.0 1.5 1 1 0 1 1 1 0 Phage related hypothetical protein (DUF1799) Abhydrolase_6 PF12697.7 gi|433637633|ref|YP_007283393.1| - 8.6e-27 95.2 12.8 9.9e-27 95.0 12.8 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|433637633|ref|YP_007283393.1| - 5.1e-23 82.0 0.1 3.1e-19 69.6 0.2 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|433637633|ref|YP_007283393.1| - 1.2e-16 60.7 0.2 1.9e-16 60.1 0.2 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 gi|433637633|ref|YP_007283393.1| - 0.0061 16.3 0.0 0.66 9.7 0.0 2.2 2 0 0 2 2 2 1 PGAP1-like protein Abhydro_lipase PF04083.16 gi|433637633|ref|YP_007283393.1| - 0.021 14.4 0.0 0.33 10.6 0.0 2.4 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region Peptidase_S9 PF00326.21 gi|433637633|ref|YP_007283393.1| - 0.054 13.0 0.3 0.25 10.8 0.0 2.1 1 1 0 2 2 2 0 Prolyl oligopeptidase family Esterase PF00756.20 gi|433637633|ref|YP_007283393.1| - 0.057 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Putative esterase Abhydrolase_4 PF08386.10 gi|433637633|ref|YP_007283393.1| - 0.11 12.7 0.1 0.48 10.6 0.0 2.2 2 1 0 2 2 2 0 TAP-like protein UPF0227 PF05728.12 gi|433637633|ref|YP_007283393.1| - 0.14 12.1 0.0 0.4 10.6 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0227) PAF-AH_p_II PF03403.13 gi|433637633|ref|YP_007283393.1| - 0.16 10.5 0.1 2.6 6.5 0.0 2.0 1 1 1 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Lipase_3 PF01764.25 gi|433637633|ref|YP_007283393.1| - 0.16 11.8 0.1 0.26 11.1 0.1 1.3 1 0 0 1 1 1 0 Lipase (class 3) CARDB PF07705.11 gi|433637634|ref|YP_007283394.1| - 7.9e-05 22.9 0.7 0.00022 21.4 0.4 2.0 2 0 0 2 2 2 1 CARDB Big_3_5 PF16640.5 gi|433637634|ref|YP_007283394.1| - 0.013 15.7 4.8 0.013 15.7 4.8 3.9 3 1 1 4 4 4 0 Bacterial Ig-like domain (group 3) CBM60 PF16841.5 gi|433637634|ref|YP_007283394.1| - 0.16 12.4 1.9 18 5.8 0.0 3.0 3 0 0 3 3 3 0 Ca-dependent carbohydrate-binding module xylan-binding Acetyltransf_6 PF13480.7 gi|433637635|ref|YP_007283395.1| - 1.6e-17 64.0 0.5 4.9e-16 59.2 0.1 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|433637635|ref|YP_007283395.1| - 0.27 10.0 0.0 2.8 6.7 0.0 2.0 2 0 0 2 2 2 0 FemAB family Glyco_transf_4 PF13439.6 gi|433637636|ref|YP_007283396.1| - 5.2e-11 42.8 0.4 5e-09 36.4 0.1 3.0 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|433637636|ref|YP_007283396.1| - 5.1e-10 39.9 0.1 6.5e-08 33.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|433637636|ref|YP_007283396.1| - 4.1e-09 36.2 0.0 1.2e-08 34.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433637636|ref|YP_007283396.1| - 8.3e-06 26.3 3.8 3.5e-05 24.3 0.8 3.0 2 2 0 2 2 2 1 Glycosyl transferase 4-like domain CARDB PF07705.11 gi|433637637|ref|YP_007283397.1| - 0.0015 18.8 1.6 0.0042 17.3 1.6 1.8 1 1 0 1 1 1 1 CARDB CBM60 PF16841.5 gi|433637637|ref|YP_007283397.1| - 0.0086 16.5 1.0 0.029 14.8 1.0 1.9 1 0 0 1 1 1 1 Ca-dependent carbohydrate-binding module xylan-binding Big_3_5 PF16640.5 gi|433637637|ref|YP_007283397.1| - 4.4 7.6 13.7 0.15 12.2 6.6 2.2 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) DUF1616 PF07760.11 gi|433637638|ref|YP_007283398.1| - 8.3e-82 274.9 0.0 1e-81 274.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Acetyltransf_6 PF13480.7 gi|433637640|ref|YP_007283400.1| - 1.4e-19 70.6 3.1 8.1e-19 68.2 1.4 2.4 2 1 1 3 3 3 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|433637640|ref|YP_007283400.1| - 0.0096 14.8 0.0 2.6 6.9 0.0 2.1 2 0 0 2 2 2 2 FemAB family Phosphodiest PF01663.22 gi|433637641|ref|YP_007283401.1| - 5e-36 125.0 0.0 5.5e-32 111.7 0.0 2.0 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase E1-E2_ATPase PF00122.20 gi|433637643|ref|YP_007283403.1| - 1.2e-31 109.6 1.4 2.1e-31 108.8 0.2 2.1 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433637643|ref|YP_007283403.1| - 1.4e-27 97.4 7.6 3.8e-27 95.9 7.6 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433637643|ref|YP_007283403.1| - 7.6e-06 26.3 0.0 2.8e-05 24.5 0.0 2.0 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|433637643|ref|YP_007283403.1| - 0.0039 17.0 0.7 0.007 16.1 0.7 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase MerE PF05052.12 gi|433637643|ref|YP_007283403.1| - 0.027 14.4 0.4 0.13 12.2 0.4 2.2 1 0 0 1 1 1 0 MerE protein ECH_1 PF00378.20 gi|433637644|ref|YP_007283404.1| - 8.1e-53 179.3 0.1 9.8e-53 179.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433637644|ref|YP_007283404.1| - 4.6e-29 102.0 1.1 1e-24 87.7 0.3 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Methyltransf_11 PF08241.12 gi|433637646|ref|YP_007283406.1| - 9.9e-18 64.6 0.0 1.7e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637646|ref|YP_007283406.1| - 8.1e-17 61.7 0.0 1.8e-16 60.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637646|ref|YP_007283406.1| - 1.4e-11 44.4 0.0 2.1e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433637646|ref|YP_007283406.1| - 3.2e-09 36.8 0.0 6.2e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637646|ref|YP_007283406.1| - 6.8e-05 23.6 0.0 0.0002 22.0 0.0 1.8 2 1 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|433637646|ref|YP_007283406.1| - 0.00012 21.5 0.0 0.00017 21.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|433637646|ref|YP_007283406.1| - 0.0023 17.3 0.0 0.0034 16.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|433637646|ref|YP_007283406.1| - 0.011 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain FtsJ PF01728.19 gi|433637646|ref|YP_007283406.1| - 0.044 13.9 0.0 0.061 13.4 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_32 PF13679.6 gi|433637646|ref|YP_007283406.1| - 0.13 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|433637646|ref|YP_007283406.1| - 0.18 11.2 0.0 1.8 8.0 0.0 2.1 2 0 0 2 2 2 0 Putative methyltransferase GATase_3 PF07685.14 gi|433637647|ref|YP_007283407.1| - 1.2e-32 113.1 0.0 1.5e-32 112.8 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|433637647|ref|YP_007283407.1| - 3.6e-08 33.5 0.0 5.6e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|433637647|ref|YP_007283407.1| - 6e-08 32.7 0.0 6e-05 23.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain SNO PF01174.19 gi|433637647|ref|YP_007283407.1| - 0.0011 18.8 0.0 0.002 18.0 0.0 1.3 1 0 0 1 1 1 1 SNO glutamine amidotransferase family CTP_synth_N PF06418.14 gi|433637647|ref|YP_007283407.1| - 0.14 11.4 0.1 0.2 10.9 0.1 1.2 1 0 0 1 1 1 0 CTP synthase N-terminus Trp_ring PF18669.1 gi|433637648|ref|YP_007283408.1| - 0.15 12.3 1.4 0.38 11.0 1.4 1.6 1 0 0 1 1 1 0 Trimeric autotransporter adhesin Trp ring domain DUF2339 PF10101.9 gi|433637650|ref|YP_007283410.1| - 0.002 16.8 0.5 0.002 16.8 0.5 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2339) Lyase_1 PF00206.20 gi|433637651|ref|YP_007283411.1| - 1.2e-51 175.9 0.0 1.6e-51 175.6 0.0 1.1 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 gi|433637651|ref|YP_007283411.1| - 2e-40 137.4 0.0 4.1e-40 136.4 0.0 1.5 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal AICARFT_IMPCHas PF01808.18 gi|433637652|ref|YP_007283412.1| - 8.4e-85 284.8 0.0 1.1e-84 284.4 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme Formyl_trans_N PF00551.19 gi|433637652|ref|YP_007283412.1| - 7.4e-38 130.1 0.0 3e-36 124.9 0.0 2.4 1 1 0 1 1 1 1 Formyl transferase CoA_binding_2 PF13380.6 gi|433637652|ref|YP_007283412.1| - 0.037 14.5 1.0 6.5 7.3 0.0 3.2 4 0 0 4 4 4 0 CoA binding domain Rpp20 PF12328.8 gi|433637652|ref|YP_007283412.1| - 0.058 13.4 0.4 0.2 11.6 0.1 2.0 2 0 0 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Toxin_25 PF08095.11 gi|433637652|ref|YP_007283412.1| - 0.16 12.0 0.2 0.36 10.8 0.2 1.6 1 0 0 1 1 1 0 Hefutoxin family TAT_signal PF10518.9 gi|433637653|ref|YP_007283413.1| - 0.026 14.4 0.5 0.063 13.2 0.5 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Usp PF00582.26 gi|433637654|ref|YP_007283414.1| - 2.9e-30 105.6 16.6 7e-23 81.7 3.9 2.8 2 1 0 2 2 2 2 Universal stress protein family CPSase_sm_chain PF00988.22 gi|433637656|ref|YP_007283416.1| - 5e-36 123.3 0.0 8.3e-35 119.4 0.0 2.3 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|433637656|ref|YP_007283416.1| - 9.3e-32 110.3 0.0 1.3e-31 109.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433637656|ref|YP_007283416.1| - 1.4e-05 25.0 0.0 0.00064 19.5 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 HTH_AsnC-type PF13404.6 gi|433637657|ref|YP_007283417.1| - 2.2e-18 65.8 2.0 3e-17 62.1 0.5 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|433637657|ref|YP_007283417.1| - 3.5e-16 58.5 0.0 6.2e-16 57.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|433637657|ref|YP_007283417.1| - 4e-10 39.5 0.4 6.3e-10 38.9 0.4 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 gi|433637657|ref|YP_007283417.1| - 2.4e-05 24.3 0.0 4.5e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|433637657|ref|YP_007283417.1| - 0.00012 21.7 0.1 0.00069 19.2 0.0 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433637657|ref|YP_007283417.1| - 0.00014 21.7 0.1 0.00022 21.0 0.1 1.4 1 0 0 1 1 1 1 MarR family Sigma70_r4 PF04545.16 gi|433637657|ref|YP_007283417.1| - 0.00038 19.9 0.1 0.00071 19.1 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|433637657|ref|YP_007283417.1| - 0.00077 19.2 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain MarR PF01047.22 gi|433637657|ref|YP_007283417.1| - 0.0019 18.1 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_29 PF13551.6 gi|433637657|ref|YP_007283417.1| - 0.0023 17.9 0.1 0.008 16.2 0.0 1.9 3 0 0 3 3 3 1 Winged helix-turn helix HTH_28 PF13518.6 gi|433637657|ref|YP_007283417.1| - 0.0039 17.3 0.0 0.075 13.2 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|433637657|ref|YP_007283417.1| - 0.004 16.5 0.1 0.0068 15.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_DeoR PF08220.12 gi|433637657|ref|YP_007283417.1| - 0.0049 16.6 0.1 0.0083 15.9 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain PaaX PF07848.12 gi|433637657|ref|YP_007283417.1| - 0.0055 16.9 0.2 0.012 15.8 0.1 1.6 1 1 0 1 1 1 1 PaaX-like protein HTH_11 PF08279.12 gi|433637657|ref|YP_007283417.1| - 0.007 16.3 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.6 gi|433637657|ref|YP_007283417.1| - 0.0076 16.7 0.3 0.016 15.7 0.1 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|433637657|ref|YP_007283417.1| - 0.016 15.0 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HrcA_DNA-bdg PF03444.15 gi|433637657|ref|YP_007283417.1| - 0.034 13.8 0.0 0.071 12.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_Crp_2 PF13545.6 gi|433637657|ref|YP_007283417.1| - 0.043 13.8 0.1 0.1 12.6 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|433637657|ref|YP_007283417.1| - 0.061 13.1 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF746 PF05344.11 gi|433637657|ref|YP_007283417.1| - 0.062 13.1 0.1 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 Domain of Unknown Function (DUF746) NapD PF03927.13 gi|433637657|ref|YP_007283417.1| - 0.097 12.7 0.4 0.2 11.7 0.4 1.5 1 0 0 1 1 1 0 NapD protein HTH_Mga PF08280.11 gi|433637657|ref|YP_007283417.1| - 0.14 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain PHP_C PF13263.6 gi|433637658|ref|YP_007283418.1| - 5.5e-18 64.5 0.0 1.3e-17 63.3 0.0 1.7 2 0 0 2 2 2 1 PHP-associated DAGK_cat PF00781.24 gi|433637659|ref|YP_007283419.1| - 6.9e-23 80.6 1.7 1.3e-22 79.8 1.7 1.5 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 gi|433637659|ref|YP_007283419.1| - 0.00011 21.5 0.4 0.00017 20.9 0.4 1.2 1 0 0 1 1 1 1 ATP-NAD kinase NUDIX PF00293.28 gi|433637660|ref|YP_007283420.1| - 1.8e-15 57.2 0.8 2.2e-15 56.9 0.8 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|433637660|ref|YP_007283420.1| - 0.001 19.0 0.1 0.0015 18.5 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain DUF3072 PF11272.8 gi|433637661|ref|YP_007283421.1| - 0.018 14.9 0.6 0.031 14.2 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3072) DDE_Tnp_IS66_C PF13817.6 gi|433637661|ref|YP_007283421.1| - 0.027 14.7 0.0 0.067 13.4 0.0 1.7 1 0 0 1 1 1 0 IS66 C-terminal element ADH_zinc_N PF00107.26 gi|433637663|ref|YP_007283423.1| - 1.9e-35 121.7 0.1 3e-35 121.0 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|433637663|ref|YP_007283423.1| - 3.1e-26 91.4 0.3 6.3e-26 90.4 0.3 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|433637663|ref|YP_007283423.1| - 2e-22 80.6 0.0 3.3e-22 80.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|433637663|ref|YP_007283423.1| - 0.001 18.4 0.2 0.0021 17.4 0.2 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain adh_short PF00106.25 gi|433637663|ref|YP_007283423.1| - 0.019 14.4 1.0 0.036 13.5 1.0 1.5 1 1 0 1 1 1 0 short chain dehydrogenase UCR_6-4kD PF08997.10 gi|433637663|ref|YP_007283423.1| - 0.061 13.3 0.1 0.16 11.9 0.1 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein Semialdhyde_dh PF01118.24 gi|433637663|ref|YP_007283423.1| - 0.13 12.7 0.2 0.22 12.0 0.2 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain ABC_tran PF00005.27 gi|433637665|ref|YP_007283425.1| - 2.6e-21 76.6 0.0 3.8e-21 76.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637665|ref|YP_007283425.1| - 6.4e-09 36.0 0.5 3.7e-05 23.7 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637665|ref|YP_007283425.1| - 3.5e-08 33.2 0.2 3.1e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MeaB PF03308.16 gi|433637665|ref|YP_007283425.1| - 0.0017 17.4 0.0 0.0026 16.8 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|433637665|ref|YP_007283425.1| - 0.011 16.1 0.1 0.019 15.4 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 gi|433637665|ref|YP_007283425.1| - 0.028 14.0 0.1 0.073 12.6 0.1 1.7 1 0 0 1 1 1 0 AAA domain Fer4_NifH PF00142.18 gi|433637665|ref|YP_007283425.1| - 0.029 13.8 0.0 0.047 13.1 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RsgA_GTPase PF03193.16 gi|433637665|ref|YP_007283425.1| - 0.083 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 gi|433637665|ref|YP_007283425.1| - 0.097 12.9 0.0 0.18 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|433637665|ref|YP_007283425.1| - 0.15 11.8 0.1 0.31 10.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 gi|433637665|ref|YP_007283425.1| - 0.17 11.6 0.4 0.62 9.8 0.1 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein Phage_holin_5_2 PF16079.5 gi|433637666|ref|YP_007283426.1| - 2.7 8.4 7.7 17 5.8 1.5 2.8 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V HTH_34 PF13601.6 gi|433637667|ref|YP_007283427.1| - 2.7e-21 75.5 0.0 3.1e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|433637667|ref|YP_007283427.1| - 2e-11 43.8 0.0 4.3e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433637667|ref|YP_007283427.1| - 9.3e-07 28.3 0.0 1.7e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|433637667|ref|YP_007283427.1| - 8.4e-06 25.7 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_5 PF01022.20 gi|433637667|ref|YP_007283427.1| - 5e-05 23.1 0.0 9.4e-05 22.2 0.0 1.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|433637667|ref|YP_007283427.1| - 5.7e-05 23.0 0.0 8.8e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|433637667|ref|YP_007283427.1| - 0.00038 20.3 0.0 0.00056 19.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HxlR PF01638.17 gi|433637667|ref|YP_007283427.1| - 0.00063 19.6 0.0 0.00072 19.4 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|433637667|ref|YP_007283427.1| - 0.001 19.0 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_AsnC-type PF13404.6 gi|433637667|ref|YP_007283427.1| - 0.0029 17.4 0.0 0.0058 16.4 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_1 PF00126.27 gi|433637667|ref|YP_007283427.1| - 0.013 15.4 0.2 0.027 14.4 0.1 1.6 2 1 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_27 PF13463.6 gi|433637667|ref|YP_007283427.1| - 0.029 14.9 0.0 0.044 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.19 gi|433637667|ref|YP_007283427.1| - 0.052 13.4 0.0 0.095 12.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Mga PF08280.11 gi|433637667|ref|YP_007283427.1| - 0.095 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain RuvB_C PF05491.13 gi|433637667|ref|YP_007283427.1| - 0.11 12.4 0.0 0.2 11.6 0.0 1.6 1 1 0 1 1 1 0 RuvB C-terminal winged helix domain MoCF_biosynth PF00994.24 gi|433637668|ref|YP_007283428.1| - 6.9e-14 51.7 0.8 1e-13 51.2 0.8 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain 5-FTHF_cyc-lig PF01812.20 gi|433637669|ref|YP_007283429.1| - 4.2e-27 95.2 0.0 5e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family TrkA_N PF02254.18 gi|433637670|ref|YP_007283430.1| - 0.031 14.5 0.1 0.044 14.0 0.1 1.3 1 0 0 1 1 1 0 TrkA-N domain GMP_synt_C PF00958.22 gi|433637671|ref|YP_007283431.1| - 2.2e-28 98.1 0.4 1.6e-27 95.4 0.1 2.2 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|433637671|ref|YP_007283431.1| - 1.4e-08 34.2 0.0 5.9e-05 22.3 0.0 2.2 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 gi|433637671|ref|YP_007283431.1| - 3.6e-05 22.7 0.0 0.00085 18.2 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|433637671|ref|YP_007283431.1| - 0.0058 16.7 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|433637671|ref|YP_007283431.1| - 0.015 15.0 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase QueC PF06508.13 gi|433637671|ref|YP_007283431.1| - 0.015 14.8 0.0 0.031 13.8 0.0 1.5 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Arginosuc_synth PF00764.19 gi|433637671|ref|YP_007283431.1| - 0.024 14.0 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase ThiI PF02568.14 gi|433637671|ref|YP_007283431.1| - 0.19 11.3 0.0 0.33 10.5 0.0 1.6 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) CTP_synth_N PF06418.14 gi|433637672|ref|YP_007283432.1| - 3.3e-124 413.5 0.1 4.2e-124 413.1 0.1 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|433637672|ref|YP_007283432.1| - 2.1e-53 180.9 0.0 3.6e-53 180.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433637672|ref|YP_007283432.1| - 2.6e-07 30.6 0.0 6.8e-07 29.2 0.0 1.7 1 1 1 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|433637672|ref|YP_007283432.1| - 0.0024 17.9 0.0 0.0034 17.4 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain DJ-1_PfpI PF01965.24 gi|433637672|ref|YP_007283432.1| - 0.15 11.8 0.0 1.4 8.7 0.0 2.4 2 1 1 3 3 3 0 DJ-1/PfpI family PadR PF03551.14 gi|433637673|ref|YP_007283433.1| - 4.5e-13 49.0 0.1 5.5e-13 48.7 0.1 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|433637673|ref|YP_007283433.1| - 4.2e-05 24.0 0.0 5.7e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|433637673|ref|YP_007283433.1| - 0.0085 16.1 0.0 0.057 13.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|433637673|ref|YP_007283433.1| - 0.016 15.0 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_34 PF13601.6 gi|433637673|ref|YP_007283433.1| - 0.021 15.0 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|433637673|ref|YP_007283433.1| - 0.023 14.4 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) NUDIX PF00293.28 gi|433637674|ref|YP_007283434.1| - 3.5e-13 49.7 0.1 4.9e-13 49.3 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain TGT PF01702.18 gi|433637675|ref|YP_007283435.1| - 4.2e-72 243.2 0.0 5.4e-72 242.9 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase OrfB_IS605 PF01385.19 gi|433637676|ref|YP_007283436.1| - 9.3e-29 100.1 0.1 1.7e-28 99.3 0.1 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|433637676|ref|YP_007283436.1| - 1.7e-19 69.5 2.3 2e-19 69.3 0.7 1.9 2 0 0 2 2 2 1 Putative transposase DNA-binding domain UPF0547 PF10571.9 gi|433637676|ref|YP_007283436.1| - 1.3 9.2 3.9 20 5.4 1.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF2062 PF09835.9 gi|433637677|ref|YP_007283437.1| - 0.003 17.4 0.3 0.0046 16.8 0.3 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) DUF2207 PF09972.9 gi|433637677|ref|YP_007283437.1| - 0.012 14.4 0.0 0.014 14.2 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HemY_N PF07219.13 gi|433637677|ref|YP_007283437.1| - 0.068 13.4 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 HemY protein N-terminus DUF3592 PF12158.8 gi|433637677|ref|YP_007283437.1| - 0.081 13.0 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) DUF4381 PF14316.6 gi|433637677|ref|YP_007283437.1| - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Usp PF00582.26 gi|433637678|ref|YP_007283438.1| - 3.1e-10 40.7 0.1 5.5e-10 39.9 0.1 1.4 1 1 0 1 1 1 1 Universal stress protein family DUF5591 PF17884.1 gi|433637679|ref|YP_007283439.1| - 8.4e-58 194.6 0.1 1.2e-57 194.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) TGT_C2 PF14810.6 gi|433637679|ref|YP_007283439.1| - 6e-23 80.8 0.0 1.7e-22 79.3 0.0 1.8 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|433637679|ref|YP_007283439.1| - 1.7e-11 43.9 0.5 9e-11 41.6 0.4 2.2 2 0 0 2 2 2 1 PUA domain TGT PF01702.18 gi|433637679|ref|YP_007283439.1| - 6.2e-10 38.8 0.1 2.9e-09 36.6 0.1 2.0 1 1 0 1 1 1 1 Queuine tRNA-ribosyltransferase IMPDH PF00478.25 gi|433637679|ref|YP_007283439.1| - 0.12 11.3 0.7 0.19 10.7 0.7 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PBP_like_2 PF12849.7 gi|433637680|ref|YP_007283440.1| - 2.6e-26 92.9 0.3 3.5e-26 92.5 0.3 1.2 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|433637680|ref|YP_007283440.1| - 1.5e-14 53.6 0.0 3.5e-14 52.4 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain TAT_signal PF10518.9 gi|433637680|ref|YP_007283440.1| - 0.00023 20.9 1.0 0.00041 20.1 1.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|433637680|ref|YP_007283440.1| - 0.01 15.2 4.0 0.022 14.1 4.0 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BPD_transp_1 PF00528.22 gi|433637681|ref|YP_007283441.1| - 2.6e-17 63.2 11.3 2.6e-17 63.2 11.3 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4084 PF13321.6 gi|433637681|ref|YP_007283441.1| - 0.052 13.1 2.5 0.079 12.5 2.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4084) BPD_transp_1 PF00528.22 gi|433637682|ref|YP_007283442.1| - 2.9e-22 79.3 12.0 2.9e-22 79.3 12.0 3.7 2 1 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|433637683|ref|YP_007283443.1| - 2e-30 106.1 0.0 3.3e-30 105.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637683|ref|YP_007283443.1| - 3.7e-12 46.7 0.0 6.5e-06 26.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637683|ref|YP_007283443.1| - 2.2e-08 33.8 0.1 1.7e-07 30.9 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|433637683|ref|YP_007283443.1| - 8.2e-06 26.1 0.0 1.6e-05 25.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|433637683|ref|YP_007283443.1| - 0.00013 21.8 0.0 0.021 14.6 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433637683|ref|YP_007283443.1| - 0.00019 21.4 0.0 0.00045 20.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_25 PF13481.6 gi|433637683|ref|YP_007283443.1| - 0.0007 19.2 0.2 0.032 13.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|433637683|ref|YP_007283443.1| - 0.0014 18.4 0.0 0.0033 17.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|433637683|ref|YP_007283443.1| - 0.0028 17.8 0.0 0.0074 16.4 0.0 2.1 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|433637683|ref|YP_007283443.1| - 0.0034 17.3 0.0 0.0056 16.6 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|433637683|ref|YP_007283443.1| - 0.0047 17.3 0.1 0.018 15.4 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|433637683|ref|YP_007283443.1| - 0.0051 16.6 0.2 0.35 10.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain DeoRC PF00455.22 gi|433637683|ref|YP_007283443.1| - 0.006 16.5 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 DeoR C terminal sensor domain AAA_23 PF13476.6 gi|433637683|ref|YP_007283443.1| - 0.0091 16.5 0.0 0.02 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain PRK PF00485.18 gi|433637683|ref|YP_007283443.1| - 0.055 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 gi|433637683|ref|YP_007283443.1| - 0.075 12.4 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.9 gi|433637683|ref|YP_007283443.1| - 0.089 11.6 0.0 4.6 5.9 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_18 PF13238.6 gi|433637683|ref|YP_007283443.1| - 0.13 12.8 0.0 0.33 11.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|433637683|ref|YP_007283443.1| - 0.2 10.4 0.0 1.9 7.2 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein PhoU PF01895.19 gi|433637684|ref|YP_007283444.1| - 3.5e-38 129.9 5.1 1.4e-21 76.8 0.4 2.2 2 0 0 2 2 2 2 PhoU domain DUF1771 PF08590.10 gi|433637684|ref|YP_007283444.1| - 0.089 13.2 0.0 2.8 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1771) MazE_antitoxin PF04014.18 gi|433637685|ref|YP_007283445.1| - 1.8e-06 27.7 0.0 3.4e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PhoU PF01895.19 gi|433637685|ref|YP_007283445.1| - 0.013 16.0 5.3 0.051 14.0 1.1 2.8 2 0 0 2 2 2 0 PhoU domain HTH_5 PF01022.20 gi|433637688|ref|YP_007283448.1| - 3.8e-11 42.7 0.1 7e-11 41.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|433637688|ref|YP_007283448.1| - 2.5e-08 33.9 2.2 4.8e-08 32.9 0.6 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|433637688|ref|YP_007283448.1| - 0.00044 20.4 0.0 0.00073 19.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|433637688|ref|YP_007283448.1| - 0.00053 19.8 0.0 0.0009 19.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|433637688|ref|YP_007283448.1| - 0.001 19.5 0.2 0.0023 18.4 0.0 1.7 2 0 0 2 2 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|433637688|ref|YP_007283448.1| - 0.0014 18.5 0.1 0.0036 17.2 0.1 1.8 1 1 0 1 1 1 1 MarR family GntR PF00392.21 gi|433637688|ref|YP_007283448.1| - 0.002 17.7 0.0 0.0035 17.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family PaaX PF07848.12 gi|433637688|ref|YP_007283448.1| - 0.009 16.2 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 PaaX-like protein RP-C PF03428.13 gi|433637688|ref|YP_007283448.1| - 0.014 15.1 0.1 0.032 13.9 0.0 1.6 1 1 1 2 2 2 0 Replication protein C N-terminal domain Cdc6_C PF09079.11 gi|433637688|ref|YP_007283448.1| - 0.036 14.0 0.0 0.31 11.1 0.0 2.2 1 1 1 2 2 2 0 CDC6, C terminal winged helix domain DUF4423 PF14394.6 gi|433637688|ref|YP_007283448.1| - 0.04 13.6 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) MarR PF01047.22 gi|433637688|ref|YP_007283448.1| - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 MarR family Penicillinase_R PF03965.16 gi|433637688|ref|YP_007283448.1| - 0.13 12.6 0.0 0.91 9.9 0.0 1.9 2 0 0 2 2 2 0 Penicillinase repressor LMWPc PF01451.21 gi|433637689|ref|YP_007283449.1| - 1e-22 81.1 0.0 1.5e-22 80.5 0.0 1.3 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase SBF PF01758.16 gi|433637690|ref|YP_007283450.1| - 8.7e-52 175.6 4.3 8.7e-52 175.6 4.3 2.1 2 0 0 2 2 2 1 Sodium Bile acid symporter family E1-E2_ATPase PF00122.20 gi|433637690|ref|YP_007283450.1| - 4.8 6.7 6.2 0.56 9.7 0.4 2.4 3 0 0 3 3 3 0 E1-E2 ATPase DNA_pol_B PF00136.21 gi|433637691|ref|YP_007283451.1| - 8.2e-24 84.1 0.0 2e-16 59.7 0.0 2.1 2 0 0 2 2 2 2 DNA polymerase family B FliT PF05400.13 gi|433637692|ref|YP_007283452.1| - 0.017 15.9 1.0 0.03 15.1 1.0 1.5 1 1 0 1 1 1 0 Flagellar protein FliT PilJ PF13675.6 gi|433637692|ref|YP_007283452.1| - 0.067 13.2 1.9 1.5 8.9 0.1 2.3 1 1 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term Rad51 PF08423.11 gi|433637693|ref|YP_007283453.1| - 0.00075 18.8 0.0 0.00098 18.5 0.0 1.1 1 0 0 1 1 1 1 Rad51 zf-HC2 PF13490.6 gi|433637693|ref|YP_007283453.1| - 0.12 12.6 1.8 1.9 8.8 1.2 2.6 2 0 0 2 2 2 0 Putative zinc-finger AAA_22 PF13401.6 gi|433637695|ref|YP_007283455.1| - 2.5e-10 40.7 0.0 1.3e-09 38.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain Bac_DnaA PF00308.18 gi|433637695|ref|YP_007283455.1| - 3.3e-10 40.2 0.0 1.6e-09 38.0 0.0 1.9 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_16 PF13191.6 gi|433637695|ref|YP_007283455.1| - 6e-08 33.2 7.4 1.7e-07 31.8 0.4 3.2 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|433637695|ref|YP_007283455.1| - 1.1e-06 29.1 0.0 6.7e-06 26.6 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|433637695|ref|YP_007283455.1| - 2.3e-06 27.7 0.0 6e-06 26.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|433637695|ref|YP_007283455.1| - 5.5e-05 23.2 0.0 0.00051 20.0 0.0 2.2 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_assoc_2 PF16193.5 gi|433637695|ref|YP_007283455.1| - 5.6e-05 23.4 1.9 0.00014 22.1 0.3 2.4 3 0 0 3 3 3 1 AAA C-terminal domain TniB PF05621.11 gi|433637695|ref|YP_007283455.1| - 7e-05 22.3 0.0 0.00016 21.1 0.0 1.6 1 1 0 1 1 1 1 Bacterial TniB protein AAA_18 PF13238.6 gi|433637695|ref|YP_007283455.1| - 0.00014 22.4 0.0 0.00051 20.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain Cdc6_C PF09079.11 gi|433637695|ref|YP_007283455.1| - 0.0013 18.7 0.3 0.0044 17.0 0.1 2.1 2 0 0 2 2 1 1 CDC6, C terminal winged helix domain AAA_14 PF13173.6 gi|433637695|ref|YP_007283455.1| - 0.004 17.2 0.0 0.026 14.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|433637695|ref|YP_007283455.1| - 0.0055 16.6 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 gi|433637695|ref|YP_007283455.1| - 0.006 16.3 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain NB-ARC PF00931.22 gi|433637695|ref|YP_007283455.1| - 0.028 13.6 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_7 PF12775.7 gi|433637695|ref|YP_007283455.1| - 0.037 13.5 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|433637695|ref|YP_007283455.1| - 0.057 13.1 0.2 0.64 9.7 0.2 2.3 1 1 0 1 1 1 0 IstB-like ATP binding protein Herpes_UL17 PF04559.12 gi|433637695|ref|YP_007283455.1| - 0.071 11.9 0.2 0.099 11.4 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus UL17 protein NTPase_1 PF03266.15 gi|433637695|ref|YP_007283455.1| - 0.077 12.9 0.4 13 5.7 0.0 2.9 2 1 1 3 3 3 0 NTPase DUF815 PF05673.13 gi|433637695|ref|YP_007283455.1| - 0.085 12.0 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TusA PF01206.17 gi|433637695|ref|YP_007283455.1| - 0.092 12.6 0.1 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Sulfurtransferase TusA AAA_2 PF07724.14 gi|433637695|ref|YP_007283455.1| - 0.11 12.6 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 gi|433637695|ref|YP_007283455.1| - 0.22 11.9 0.0 0.51 10.8 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Na_H_Exchanger PF00999.21 gi|433637696|ref|YP_007283456.1| - 9.1e-61 205.7 54.0 1.1e-60 205.4 54.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Phage_holin_7_1 PF16081.5 gi|433637696|ref|YP_007283456.1| - 1.9 8.6 5.3 9.4 6.4 0.1 2.5 2 0 0 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family MFS_1 PF07690.16 gi|433637697|ref|YP_007283457.1| - 2.7e-29 102.2 67.0 2.9e-21 75.8 30.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433637697|ref|YP_007283457.1| - 1.3 7.8 22.2 1.3 7.8 0.1 3.4 2 2 1 3 3 3 0 MFS_1 like family DZR PF12773.7 gi|433637698|ref|YP_007283458.1| - 2.4e-05 24.3 0.5 3.2e-05 23.9 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433637698|ref|YP_007283458.1| - 0.00016 21.3 0.9 0.00026 20.6 0.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|433637698|ref|YP_007283458.1| - 0.0011 19.7 0.2 0.0014 19.3 0.2 1.2 1 0 0 1 1 1 1 zinc-ribbon family zf-ribbon_3 PF13248.6 gi|433637698|ref|YP_007283458.1| - 0.0016 17.8 2.4 0.0028 17.0 2.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain TM2 PF05154.16 gi|433637698|ref|YP_007283458.1| - 0.0029 17.9 0.8 0.0056 17.0 0.8 1.4 1 0 0 1 1 1 1 TM2 domain RecR PF02132.15 gi|433637698|ref|YP_007283458.1| - 0.032 13.8 0.5 0.065 12.8 0.5 1.5 1 0 0 1 1 1 0 RecR protein DUF1610 PF07754.11 gi|433637698|ref|YP_007283458.1| - 0.051 13.5 0.3 0.26 11.3 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Wzy_C PF04932.15 gi|433637698|ref|YP_007283458.1| - 0.054 13.1 0.2 0.059 13.0 0.2 1.2 1 0 0 1 1 1 0 O-Antigen ligase PLATZ PF04640.14 gi|433637698|ref|YP_007283458.1| - 0.095 13.3 0.1 0.13 12.9 0.1 1.2 1 0 0 1 1 1 0 PLATZ transcription factor zf-RING_7 PF02591.15 gi|433637698|ref|YP_007283458.1| - 0.12 12.6 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 C4-type zinc ribbon domain HypA PF01155.19 gi|433637698|ref|YP_007283458.1| - 0.16 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GTA_holin_3TM PF11351.8 gi|433637698|ref|YP_007283458.1| - 0.3 11.6 3.6 0.45 11.1 3.6 1.3 1 0 0 1 1 1 0 Holin of 3TMs, for gene-transfer release TetR_C_6 PF13977.6 gi|433637699|ref|YP_007283459.1| - 1.9e-19 69.9 7.9 3.7e-19 69.1 7.9 1.5 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 gi|433637699|ref|YP_007283459.1| - 1e-10 41.2 1.4 2.2e-10 40.1 1.4 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|433637699|ref|YP_007283459.1| - 1.4e-06 28.6 0.3 3.7e-06 27.2 0.1 1.8 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_27 PF17935.1 gi|433637699|ref|YP_007283459.1| - 0.0086 16.1 0.9 0.022 14.8 0.6 2.1 1 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|433637699|ref|YP_007283459.1| - 0.12 12.5 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_31 PF17940.1 gi|433637699|ref|YP_007283459.1| - 0.9 9.8 12.8 0.57 10.4 10.0 2.2 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain MatE PF01554.18 gi|433637701|ref|YP_007283461.1| - 1.2e-53 181.1 34.7 3.3e-32 111.4 16.2 2.5 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|433637701|ref|YP_007283461.1| - 0.0068 16.5 42.8 0.014 15.4 16.2 4.7 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain polyprenyl_synt PF00348.17 gi|433637702|ref|YP_007283462.1| - 0.042 12.9 0.0 0.065 12.3 0.0 1.2 1 0 0 1 1 1 0 Polyprenyl synthetase DUF1328 PF07043.13 gi|433637703|ref|YP_007283463.1| - 6.5e-11 42.3 18.9 9e-11 41.8 18.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) Nodulin_late PF07127.11 gi|433637703|ref|YP_007283463.1| - 1.3 9.4 0.1 1.3 9.4 0.1 2.0 2 0 0 2 2 2 0 Late nodulin protein Zn-ribbon_8 PF09723.10 gi|433637704|ref|YP_007283464.1| - 0.0012 18.9 0.9 0.5 10.5 0.0 2.1 2 0 0 2 2 2 2 Zinc ribbon domain Polyketide_cyc2 PF10604.9 gi|433637704|ref|YP_007283464.1| - 0.034 14.4 0.1 0.034 14.4 0.1 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport RNA_POL_M_15KD PF02150.16 gi|433637704|ref|YP_007283464.1| - 0.056 13.3 3.6 0.29 11.0 0.4 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit HPTransfase PF10090.9 gi|433637704|ref|YP_007283464.1| - 0.079 12.8 0.0 0.087 12.6 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphotransferase C-terminal domain zinc_ribbon_4 PF13717.6 gi|433637704|ref|YP_007283464.1| - 0.66 9.9 3.9 11 6.0 0.1 2.7 2 1 0 2 2 2 0 zinc-ribbon domain DUF5527 PF17665.1 gi|433637706|ref|YP_007283466.1| - 0.24 10.9 1.7 0.74 9.3 0.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5527) Nbas_N PF15492.6 gi|433637707|ref|YP_007283467.1| - 0.029 13.7 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal DeoC PF01791.9 gi|433637710|ref|YP_007283470.1| - 5.6e-39 134.2 0.0 6.4e-39 134.0 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase His_biosynth PF00977.21 gi|433637710|ref|YP_007283470.1| - 0.069 12.6 0.0 0.76 9.2 0.0 2.0 2 0 0 2 2 2 0 Histidine biosynthesis protein FBPase PF00316.20 gi|433637711|ref|YP_007283471.1| - 1.4e-24 86.7 0.0 1.9e-24 86.2 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Inositol_P PF00459.25 gi|433637711|ref|YP_007283471.1| - 0.038 13.5 0.0 0.046 13.2 0.0 1.3 1 0 0 1 1 1 0 Inositol monophosphatase family Glycos_transf_1 PF00534.20 gi|433637712|ref|YP_007283472.1| - 4.7e-29 101.1 0.0 6.9e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433637712|ref|YP_007283472.1| - 1.8e-15 57.6 0.0 3.4e-15 56.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|433637712|ref|YP_007283472.1| - 1.6e-06 28.4 0.0 3.2e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_20 PF00982.21 gi|433637712|ref|YP_007283472.1| - 0.012 14.3 0.0 3.6 6.1 0.0 2.1 2 0 0 2 2 2 0 Glycosyltransferase family 20 Glyco_transf_4 PF13439.6 gi|433637712|ref|YP_007283472.1| - 0.088 12.8 0.1 0.25 11.3 0.0 1.9 1 1 0 1 1 1 0 Glycosyltransferase Family 4 Usp PF00582.26 gi|433637713|ref|YP_007283473.1| - 1.2e-60 204.1 10.2 1.7e-33 116.1 1.0 2.0 2 0 0 2 2 2 2 Universal stress protein family NTP_transferase PF00483.23 gi|433637714|ref|YP_007283474.1| - 2.7e-32 112.3 0.0 3.3e-32 112.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433637714|ref|YP_007283474.1| - 7.4e-13 49.2 0.0 1.1e-12 48.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|433637714|ref|YP_007283474.1| - 0.089 12.5 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ADP_PFK_GK PF04587.15 gi|433637715|ref|YP_007283475.1| - 1e-81 274.8 0.0 1.1e-81 274.6 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region Usp PF00582.26 gi|433637716|ref|YP_007283476.1| - 2.1e-28 99.6 2.7 2.3e-28 99.5 2.7 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4175 PF13779.6 gi|433637717|ref|YP_007283477.1| - 3.5 5.4 3.9 3.9 5.3 3.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) DUF2207 PF09972.9 gi|433637717|ref|YP_007283477.1| - 4.8 5.8 4.6 5.6 5.6 4.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Carboxyl_trans PF01039.22 gi|433637719|ref|YP_007283479.1| - 8.8e-128 427.0 0.1 1.1e-127 426.7 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain PNP_UDP_1 PF01048.20 gi|433637721|ref|YP_007283481.1| - 2.2e-46 158.0 5.3 2.6e-46 157.8 5.3 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DUF3568 PF12092.8 gi|433637721|ref|YP_007283481.1| - 0.083 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3568) ThiS PF02597.20 gi|433637722|ref|YP_007283482.1| - 4.2e-14 53.0 0.1 4.8e-14 52.8 0.1 1.1 1 0 0 1 1 1 1 ThiS family Acetyltransf_6 PF13480.7 gi|433637722|ref|YP_007283482.1| - 0.094 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain RBD PF02196.15 gi|433637722|ref|YP_007283482.1| - 0.11 12.6 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Raf-like Ras-binding domain Acetyltransf_1 PF00583.25 gi|433637723|ref|YP_007283483.1| - 3.8e-08 33.6 0.0 7.9e-08 32.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|433637723|ref|YP_007283483.1| - 0.0003 20.9 0.1 0.008 16.3 0.1 2.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433637723|ref|YP_007283483.1| - 0.00037 20.9 0.0 0.00069 20.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433637723|ref|YP_007283483.1| - 0.0019 18.3 0.0 0.004 17.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_10 PF13673.7 gi|433637723|ref|YP_007283483.1| - 0.0021 18.0 0.0 0.0046 16.9 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|433637723|ref|YP_007283483.1| - 0.061 13.1 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_6 PF13480.7 gi|433637723|ref|YP_007283483.1| - 2.5 8.3 14.1 0.14 12.3 2.7 2.6 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain Asparaginase PF00710.20 gi|433637724|ref|YP_007283484.1| - 6.2e-60 202.0 0.8 1.3e-59 201.0 0.2 1.7 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|433637724|ref|YP_007283484.1| - 2e-26 92.5 0.1 1.1e-25 90.1 0.0 2.1 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|433637724|ref|YP_007283484.1| - 5.3e-17 60.9 0.0 9.4e-17 60.1 0.0 1.4 1 0 0 1 1 1 1 GatD N-terminal domain DUF2064 PF09837.9 gi|433637724|ref|YP_007283484.1| - 0.11 12.3 0.2 4.3 7.2 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2064) Tir_receptor_N PF07490.11 gi|433637725|ref|YP_007283485.1| - 0.16 11.8 0.4 0.16 11.8 0.4 1.3 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) N-terminus DUF2070 PF09843.9 gi|433637726|ref|YP_007283486.1| - 0.12 10.6 1.9 0.16 10.2 1.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HTH_5 PF01022.20 gi|433637727|ref|YP_007283487.1| - 8.6e-21 73.5 0.2 1.6e-17 63.1 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|433637727|ref|YP_007283487.1| - 4e-18 65.2 2.3 4.3e-13 49.1 0.2 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain TrmB PF01978.19 gi|433637727|ref|YP_007283487.1| - 7.7e-15 54.5 0.2 3.8e-06 26.7 0.1 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433637727|ref|YP_007283487.1| - 8.3e-15 54.4 3.7 2.6e-09 36.8 0.3 2.5 2 0 0 2 2 2 2 MarR family MarR PF01047.22 gi|433637727|ref|YP_007283487.1| - 2.3e-09 37.1 0.3 3.8e-07 29.9 0.1 2.4 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|433637727|ref|YP_007283487.1| - 6.5e-08 33.0 0.8 1.4e-05 25.5 0.1 2.7 2 1 0 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|433637727|ref|YP_007283487.1| - 1.4e-07 31.7 0.0 0.0014 19.0 0.0 2.4 2 0 0 2 2 2 2 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|433637727|ref|YP_007283487.1| - 1.6e-07 31.2 0.6 0.00024 21.0 0.1 2.6 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|433637727|ref|YP_007283487.1| - 7.4e-07 28.6 0.3 7.4e-07 28.6 0.3 3.2 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|433637727|ref|YP_007283487.1| - 1.4e-06 28.0 3.0 0.0054 16.5 0.1 2.8 3 1 0 3 3 2 2 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|433637727|ref|YP_007283487.1| - 2.6e-06 27.5 0.0 8e-06 26.0 0.0 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain DprA_WH PF17782.1 gi|433637727|ref|YP_007283487.1| - 7.5e-06 26.0 2.3 0.00021 21.3 0.0 2.9 3 1 0 3 3 2 1 DprA winged helix domain DUF742 PF05331.11 gi|433637727|ref|YP_007283487.1| - 1.3e-05 25.0 0.0 0.016 15.0 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF742) HTH_11 PF08279.12 gi|433637727|ref|YP_007283487.1| - 2.5e-05 24.1 0.0 5.3e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 HTH domain FeoC PF09012.10 gi|433637727|ref|YP_007283487.1| - 5.3e-05 23.2 0.1 0.26 11.4 0.0 3.1 3 0 0 3 3 3 1 FeoC like transcriptional regulator DUF2250 PF10007.9 gi|433637727|ref|YP_007283487.1| - 0.00011 22.2 0.0 0.073 13.2 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) LexA_DNA_bind PF01726.16 gi|433637727|ref|YP_007283487.1| - 0.00013 21.7 1.1 0.0096 15.7 0.0 3.2 3 1 0 3 3 3 1 LexA DNA binding domain PadR PF03551.14 gi|433637727|ref|YP_007283487.1| - 0.00019 21.3 1.3 0.0017 18.3 0.1 3.0 3 1 0 3 3 2 1 Transcriptional regulator PadR-like family HTH_CodY PF08222.11 gi|433637727|ref|YP_007283487.1| - 0.00044 19.7 0.0 0.00097 18.6 0.0 1.5 1 0 0 1 1 1 1 CodY helix-turn-helix domain GntR PF00392.21 gi|433637727|ref|YP_007283487.1| - 0.00095 18.8 0.8 0.05 13.3 0.0 2.8 2 1 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|433637727|ref|YP_007283487.1| - 0.0011 18.8 0.0 0.0036 17.1 0.0 1.9 1 0 0 1 1 1 1 HTH DNA binding domain TetR_C_11 PF16859.5 gi|433637727|ref|YP_007283487.1| - 0.0015 18.9 0.2 0.0032 17.8 0.2 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_45 PF14947.6 gi|433637727|ref|YP_007283487.1| - 0.0018 18.2 0.0 0.22 11.5 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_1 PF00126.27 gi|433637727|ref|YP_007283487.1| - 0.012 15.5 1.3 1.8 8.6 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family ArsR PF09824.9 gi|433637727|ref|YP_007283487.1| - 0.013 15.1 0.0 0.047 13.3 0.0 1.9 2 0 0 2 2 2 0 ArsR transcriptional regulator Cdc6_C PF09079.11 gi|433637727|ref|YP_007283487.1| - 0.014 15.3 0.0 1.4 8.9 0.0 2.5 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain RuvB_C PF05491.13 gi|433637727|ref|YP_007283487.1| - 0.016 15.0 0.0 0.19 11.6 0.0 2.1 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain RP-C PF03428.13 gi|433637727|ref|YP_007283487.1| - 0.017 14.8 0.1 0.045 13.4 0.0 1.7 2 0 0 2 2 1 0 Replication protein C N-terminal domain DDRGK PF09756.9 gi|433637727|ref|YP_007283487.1| - 0.02 14.5 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain HemN_C PF06969.16 gi|433637727|ref|YP_007283487.1| - 0.022 14.8 0.0 8.5 6.5 0.0 2.6 2 0 0 2 2 2 0 HemN C-terminal domain HTH_36 PF13730.6 gi|433637727|ref|YP_007283487.1| - 0.025 14.5 0.0 0.051 13.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HxlR PF01638.17 gi|433637727|ref|YP_007283487.1| - 0.026 14.4 0.1 0.12 12.3 0.1 2.1 2 0 0 2 2 2 0 HxlR-like helix-turn-helix SMC_ScpB PF04079.16 gi|433637727|ref|YP_007283487.1| - 0.027 14.1 0.2 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 Segregation and condensation complex subunit ScpB HTH_AsnC-type PF13404.6 gi|433637727|ref|YP_007283487.1| - 0.031 14.1 4.1 0.038 13.8 0.1 3.2 3 1 0 3 3 2 0 AsnC-type helix-turn-helix domain BLACT_WH PF17778.1 gi|433637727|ref|YP_007283487.1| - 0.038 14.0 4.8 0.069 13.1 0.2 2.9 3 0 0 3 3 2 0 Beta-lactamase associated winged helix domain HTH_12 PF08461.10 gi|433637727|ref|YP_007283487.1| - 0.04 13.9 0.4 2 8.4 0.0 2.8 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_DeoR PF08220.12 gi|433637727|ref|YP_007283487.1| - 0.04 13.7 0.0 0.1 12.3 0.0 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DUF2513 PF10711.9 gi|433637727|ref|YP_007283487.1| - 0.052 13.8 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) CwsA PF10814.8 gi|433637727|ref|YP_007283487.1| - 0.081 13.1 0.2 0.31 11.2 0.1 1.9 1 1 1 2 2 2 0 Cell wall synthesis protein CwsA FaeA PF04703.12 gi|433637727|ref|YP_007283487.1| - 0.14 12.6 0.0 0.31 11.4 0.0 1.6 1 0 0 1 1 1 0 FaeA-like protein TnsD PF15978.5 gi|433637727|ref|YP_007283487.1| - 0.15 11.0 0.0 0.22 10.5 0.0 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D IF2_N PF04760.15 gi|433637727|ref|YP_007283487.1| - 0.17 11.7 0.0 0.52 10.2 0.0 1.8 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region DUF3426 PF11906.8 gi|433637728|ref|YP_007283488.1| - 0.0066 16.6 0.0 0.0098 16.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3426) TF_AP-2 PF03299.14 gi|433637729|ref|YP_007283489.1| - 0.0071 16.3 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Transcription factor AP-2 DUF2207 PF09972.9 gi|433637729|ref|YP_007283489.1| - 0.4 9.4 1.1 0.56 8.9 0.0 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) HPP PF04982.13 gi|433637730|ref|YP_007283490.1| - 1.7e-15 57.3 12.6 2.5e-15 56.7 12.6 1.3 1 0 0 1 1 1 1 HPP family Tlr3_TMD PF17968.1 gi|433637730|ref|YP_007283490.1| - 2.9 8.2 5.0 0.56 10.4 1.1 1.9 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain MR_MLE_C PF13378.6 gi|433637733|ref|YP_007283493.1| - 1.3e-43 149.2 0.3 1.9e-43 148.6 0.3 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|433637733|ref|YP_007283493.1| - 3.3e-12 46.6 0.0 5.4e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF1611 PF07755.11 gi|433637734|ref|YP_007283494.1| - 9.6e-68 227.4 0.9 1.3e-67 226.9 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain DUF1611_N PF17396.2 gi|433637734|ref|YP_007283494.1| - 5.5e-32 109.9 0.3 2.7e-30 104.5 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain AAA_26 PF13500.6 gi|433637734|ref|YP_007283494.1| - 0.11 12.3 0.2 6.3 6.6 0.0 2.3 1 1 1 2 2 2 0 AAA domain Toprim_2 PF13155.6 gi|433637734|ref|YP_007283494.1| - 0.23 11.9 1.8 2.3 8.7 0.1 2.7 3 0 0 3 3 3 0 Toprim-like acVLRF1 PF18859.1 gi|433637735|ref|YP_007283495.1| - 1.8e-32 112.4 2.8 1.8e-32 112.4 2.8 2.7 2 1 1 3 3 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|433637735|ref|YP_007283495.1| - 3.9e-10 40.1 1.2 3.9e-10 40.1 1.2 2.1 2 1 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_2 PF03464.15 gi|433637735|ref|YP_007283495.1| - 0.0021 18.4 0.0 0.0033 17.8 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 ADIP PF11559.8 gi|433637735|ref|YP_007283495.1| - 0.0035 17.5 3.4 0.0065 16.6 3.4 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 gi|433637735|ref|YP_007283495.1| - 0.0044 17.5 10.8 0.032 14.8 9.4 2.2 2 0 0 2 2 2 1 Apg6 coiled-coil region Tropomyosin_1 PF12718.7 gi|433637735|ref|YP_007283495.1| - 0.013 15.6 5.8 0.013 15.6 5.8 1.6 2 0 0 2 2 2 0 Tropomyosin like Dynamitin PF04912.14 gi|433637735|ref|YP_007283495.1| - 0.033 13.5 4.8 0.02 14.2 3.1 1.4 2 0 0 2 2 2 0 Dynamitin DUF1192 PF06698.11 gi|433637735|ref|YP_007283495.1| - 0.052 13.6 12.0 0.29 11.2 2.4 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) Cgr1 PF03879.14 gi|433637735|ref|YP_007283495.1| - 0.16 12.4 9.4 0.32 11.4 9.4 1.5 1 0 0 1 1 1 0 Cgr1 family HeLo PF14479.6 gi|433637735|ref|YP_007283495.1| - 0.4 10.5 3.7 0.5 10.2 2.7 1.6 2 0 0 2 2 2 0 Prion-inhibition and propagation DUF3584 PF12128.8 gi|433637735|ref|YP_007283495.1| - 0.42 8.1 6.3 1.8 5.9 3.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) FapA PF03961.13 gi|433637735|ref|YP_007283495.1| - 0.6 8.7 1.1 0.95 8.0 1.1 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A ZapB PF06005.12 gi|433637735|ref|YP_007283495.1| - 1.6 9.3 11.4 0.92 10.0 8.8 1.9 2 0 0 2 2 2 0 Cell division protein ZapB Jnk-SapK_ap_N PF09744.9 gi|433637735|ref|YP_007283495.1| - 3.1 8.0 11.5 1.1 9.5 8.7 1.6 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 PALP PF00291.25 gi|433637738|ref|YP_007283498.1| - 1.7e-64 218.1 5.1 1.9e-64 217.9 5.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme OrfB_Zn_ribbon PF07282.11 gi|433637738|ref|YP_007283498.1| - 0.19 11.6 0.3 0.39 10.7 0.3 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2H2 PF00096.26 gi|433637738|ref|YP_007283498.1| - 0.98 10.0 2.4 8.3 7.1 0.1 3.1 3 0 0 3 3 3 0 Zinc finger, C2H2 type Thiolase_C PF02803.18 gi|433637739|ref|YP_007283499.1| - 0.018 14.7 0.0 0.041 13.5 0.0 1.7 1 0 0 1 1 1 0 Thiolase, C-terminal domain OB_aCoA_assoc PF01796.17 gi|433637740|ref|YP_007283500.1| - 2.8e-20 72.1 0.8 4.2e-20 71.5 0.8 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|433637740|ref|YP_007283500.1| - 7.8e-13 48.0 3.8 1.1e-12 47.5 3.8 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RRN7 PF11781.8 gi|433637740|ref|YP_007283500.1| - 0.053 13.2 0.9 0.053 13.2 0.9 2.4 1 1 2 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Amino_oxidase PF01593.24 gi|433637741|ref|YP_007283501.1| - 1e-48 166.8 1.3 1.8e-48 166.0 1.3 1.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|433637741|ref|YP_007283501.1| - 1.8e-17 63.3 0.9 4.5e-17 62.0 0.9 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|433637741|ref|YP_007283501.1| - 9.8e-08 32.0 17.3 6.5e-07 29.2 17.3 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|433637741|ref|YP_007283501.1| - 1.3e-06 27.9 0.9 2.4e-06 27.0 0.9 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433637741|ref|YP_007283501.1| - 1.3e-06 27.8 6.5 6.8e-06 25.4 4.2 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 gi|433637741|ref|YP_007283501.1| - 3.1e-06 26.8 4.4 4.6e-06 26.2 4.4 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|433637741|ref|YP_007283501.1| - 5.6e-06 26.8 1.5 1.4e-05 25.5 1.5 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|433637741|ref|YP_007283501.1| - 2e-05 24.0 2.2 3.3e-05 23.3 2.2 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|433637741|ref|YP_007283501.1| - 4.9e-05 22.2 0.8 7.3e-05 21.6 0.8 1.2 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|433637741|ref|YP_007283501.1| - 0.00029 20.0 1.6 0.0004 19.6 1.6 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|433637741|ref|YP_007283501.1| - 0.0022 17.3 0.7 0.0045 16.3 0.7 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|433637741|ref|YP_007283501.1| - 0.0069 15.6 0.3 0.012 14.9 0.3 1.3 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 gi|433637741|ref|YP_007283501.1| - 0.022 13.6 1.1 0.04 12.8 1.1 1.4 1 0 0 1 1 1 0 Tryptophan halogenase CoA_transf_3 PF02515.17 gi|433637741|ref|YP_007283501.1| - 0.023 13.8 0.1 0.05 12.7 0.1 1.5 1 0 0 1 1 1 0 CoA-transferase family III Lycopene_cycl PF05834.12 gi|433637741|ref|YP_007283501.1| - 0.035 13.2 1.2 0.057 12.5 1.2 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|433637741|ref|YP_007283501.1| - 0.037 14.0 0.6 0.037 14.0 0.6 1.9 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|433637741|ref|YP_007283501.1| - 0.065 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 gi|433637741|ref|YP_007283501.1| - 0.074 12.7 0.5 0.13 11.9 0.5 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 gi|433637741|ref|YP_007283501.1| - 0.12 11.6 0.2 0.19 10.9 0.2 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MCRA PF06100.11 gi|433637741|ref|YP_007283501.1| - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 MCRA family YjeF_N PF03853.15 gi|433637741|ref|YP_007283501.1| - 0.16 11.9 0.9 0.23 11.3 0.2 1.6 2 0 0 2 2 2 0 YjeF-related protein N-terminus Metallophos PF00149.28 gi|433637742|ref|YP_007283502.1| - 8.8e-07 29.6 0.4 2.8e-06 28.0 0.1 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|433637742|ref|YP_007283502.1| - 3.8e-05 23.9 0.0 5.1e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Exosortase_EpsH PF09721.10 gi|433637743|ref|YP_007283503.1| - 7.3e-16 58.5 15.0 1.3e-15 57.6 15.0 1.4 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Acetyltransf_3 PF13302.7 gi|433637744|ref|YP_007283504.1| - 2.3e-14 54.2 0.0 2.9e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Arg_repressor_C PF02863.18 gi|433637744|ref|YP_007283504.1| - 0.085 12.7 0.2 0.47 10.3 0.1 2.0 2 0 0 2 2 2 0 Arginine repressor, C-terminal domain Acetyltransf_3 PF13302.7 gi|433637745|ref|YP_007283505.1| - 3e-16 60.4 0.0 4e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain S_4TM PF18159.1 gi|433637745|ref|YP_007283505.1| - 0.19 11.0 0.0 0.26 10.6 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Bac_luciferase PF00296.20 gi|433637746|ref|YP_007283506.1| - 6.1e-67 226.3 5.4 7.7e-67 225.9 5.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Colicin PF01024.19 gi|433637748|ref|YP_007283508.1| - 0.88 9.4 3.1 1.3 8.9 3.1 1.2 1 0 0 1 1 1 0 Colicin pore forming domain Trm112p PF03966.16 gi|433637749|ref|YP_007283509.1| - 1.2e-10 41.8 1.9 2.4e-10 40.8 1.9 1.5 1 1 0 1 1 1 1 Trm112p-like protein TF_Zn_Ribbon PF08271.12 gi|433637749|ref|YP_007283509.1| - 0.012 15.1 0.3 0.02 14.4 0.3 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding HisKA PF00512.25 gi|433637750|ref|YP_007283510.1| - 1.3e-13 50.8 1.2 3.4e-13 49.4 1.2 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 gi|433637750|ref|YP_007283510.1| - 2e-09 37.9 0.0 2.8e-08 34.2 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 gi|433637750|ref|YP_007283510.1| - 6e-05 23.4 2.6 0.00015 22.1 0.2 2.4 2 0 0 2 2 2 1 GAF domain PAS_8 PF13188.7 gi|433637750|ref|YP_007283510.1| - 0.0031 17.5 0.0 0.032 14.2 0.0 2.6 2 0 0 2 2 2 1 PAS domain GAF_3 PF13492.6 gi|433637750|ref|YP_007283510.1| - 0.0057 17.0 0.0 0.011 16.0 0.0 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c_2 PF13581.6 gi|433637750|ref|YP_007283510.1| - 0.0095 15.9 0.3 0.027 14.4 0.3 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF3391 PF11871.8 gi|433637750|ref|YP_007283510.1| - 0.094 13.3 0.1 0.28 11.7 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) Adenylsucc_synt PF00709.21 gi|433637752|ref|YP_007283512.1| - 1.1e-149 498.9 0.0 1.3e-149 498.7 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Phage_rep_org_N PF09681.10 gi|433637753|ref|YP_007283513.1| - 0.0029 17.5 0.1 0.0051 16.7 0.0 1.5 1 1 1 2 2 2 1 N-terminal phage replisome organiser (Phage_rep_org_N) TrmB PF01978.19 gi|433637753|ref|YP_007283513.1| - 0.0071 16.2 0.5 0.012 15.5 0.2 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.10 gi|433637753|ref|YP_007283513.1| - 0.012 15.6 0.0 0.023 14.6 0.0 1.6 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_24 PF13412.6 gi|433637753|ref|YP_007283513.1| - 0.012 15.1 0.3 0.021 14.4 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433637753|ref|YP_007283513.1| - 0.024 14.5 0.1 0.052 13.4 0.1 1.6 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family CLZ PF16526.5 gi|433637753|ref|YP_007283513.1| - 0.058 13.8 6.6 0.25 11.7 0.9 2.1 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Vps5 PF09325.10 gi|433637753|ref|YP_007283513.1| - 0.068 12.7 1.4 0.62 9.6 0.3 2.0 2 0 0 2 2 2 0 Vps5 C terminal like DUF2250 PF10007.9 gi|433637753|ref|YP_007283513.1| - 0.076 13.1 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) KLRAQ PF10205.9 gi|433637754|ref|YP_007283514.1| - 0.0003 21.0 1.1 0.00071 19.8 1.1 1.6 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein HOOK PF05622.12 gi|433637754|ref|YP_007283514.1| - 0.00063 18.0 6.3 0.001 17.4 6.3 1.2 1 0 0 1 1 1 1 HOOK protein Rab5-bind PF09311.11 gi|433637754|ref|YP_007283514.1| - 0.0036 16.8 5.9 0.0072 15.8 5.9 1.4 1 0 0 1 1 1 1 Rabaptin-like protein KASH_CCD PF14662.6 gi|433637754|ref|YP_007283514.1| - 0.0038 17.1 8.0 0.0064 16.3 8.0 1.3 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH ZapB PF06005.12 gi|433637754|ref|YP_007283514.1| - 0.0047 17.3 9.1 0.014 15.8 9.1 1.8 1 0 0 1 1 1 1 Cell division protein ZapB CENP-F_leu_zip PF10473.9 gi|433637754|ref|YP_007283514.1| - 0.007 16.4 10.1 0.015 15.3 10.1 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMPIT PF07851.13 gi|433637754|ref|YP_007283514.1| - 0.0078 15.5 0.3 0.012 14.9 0.3 1.2 1 0 0 1 1 1 1 TMPIT-like protein NPV_P10 PF05531.12 gi|433637754|ref|YP_007283514.1| - 0.0084 16.5 0.4 0.02 15.4 0.4 1.5 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein T3SSipB PF16535.5 gi|433637754|ref|YP_007283514.1| - 0.011 16.2 1.2 0.011 16.2 1.2 2.0 2 0 0 2 2 1 0 Type III cell invasion protein SipB BRE1 PF08647.11 gi|433637754|ref|YP_007283514.1| - 0.012 15.6 7.4 0.028 14.5 7.4 1.5 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase HAUS-augmin3 PF14932.6 gi|433637754|ref|YP_007283514.1| - 0.015 14.9 3.6 0.03 13.9 3.6 1.5 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Syntaxin-6_N PF09177.11 gi|433637754|ref|YP_007283514.1| - 0.017 15.6 2.3 0.056 14.0 2.3 1.9 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Taxilin PF09728.9 gi|433637754|ref|YP_007283514.1| - 0.018 14.2 7.0 0.032 13.4 7.0 1.3 1 0 0 1 1 1 0 Myosin-like coiled-coil protein UPF0449 PF15136.6 gi|433637754|ref|YP_007283514.1| - 0.024 15.1 4.6 0.094 13.2 4.6 2.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 DUF3450 PF11932.8 gi|433637754|ref|YP_007283514.1| - 0.044 13.1 12.8 0.012 14.9 9.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 gi|433637754|ref|YP_007283514.1| - 0.048 13.9 5.4 0.12 12.6 5.4 1.6 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain GAS PF13851.6 gi|433637754|ref|YP_007283514.1| - 0.058 12.7 6.9 0.092 12.1 6.9 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF4200 PF13863.6 gi|433637754|ref|YP_007283514.1| - 0.061 13.7 6.9 0.15 12.5 6.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DivIC PF04977.15 gi|433637754|ref|YP_007283514.1| - 0.07 12.9 10.9 0.067 13.0 3.2 2.4 1 1 1 2 2 2 0 Septum formation initiator LPP PF04728.13 gi|433637754|ref|YP_007283514.1| - 0.084 13.3 1.5 1.2 9.6 0.2 2.8 1 1 1 2 2 2 0 Lipoprotein leucine-zipper TolA_bind_tri PF16331.5 gi|433637754|ref|YP_007283514.1| - 0.11 12.6 8.4 0.26 11.4 8.4 1.6 1 0 0 1 1 1 0 TolA binding protein trimerisation DUF1664 PF07889.12 gi|433637754|ref|YP_007283514.1| - 0.12 12.4 4.8 0.2 11.7 4.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CENP-H PF05837.12 gi|433637754|ref|YP_007283514.1| - 0.13 12.7 7.7 0.44 11.0 7.7 1.8 1 0 0 1 1 1 0 Centromere protein H (CENP-H) bZIP_1 PF00170.21 gi|433637754|ref|YP_007283514.1| - 0.15 12.1 5.9 0.2 11.8 1.6 2.1 1 1 1 2 2 2 0 bZIP transcription factor Cnn_1N PF07989.11 gi|433637754|ref|YP_007283514.1| - 0.16 12.2 6.2 0.39 10.9 6.2 1.6 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 Golgin_A5 PF09787.9 gi|433637754|ref|YP_007283514.1| - 0.17 11.3 12.8 0.3 10.5 12.8 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 IFT20 PF14931.6 gi|433637754|ref|YP_007283514.1| - 0.18 12.0 5.8 0.36 11.0 5.8 1.4 1 0 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 DUF812 PF05667.11 gi|433637754|ref|YP_007283514.1| - 0.21 10.5 16.0 0.29 10.0 16.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) APG6_N PF17675.1 gi|433637754|ref|YP_007283514.1| - 0.22 12.0 19.2 0.043 14.3 15.1 1.9 1 1 0 2 2 1 0 Apg6 coiled-coil region HALZ PF02183.18 gi|433637754|ref|YP_007283514.1| - 0.24 11.7 2.0 0.55 10.5 2.0 1.6 1 0 0 1 1 1 0 Homeobox associated leucine zipper YabA PF06156.13 gi|433637754|ref|YP_007283514.1| - 0.24 12.0 7.3 0.45 11.2 5.2 2.3 2 0 0 2 2 2 0 Initiation control protein YabA TMCO5 PF14992.6 gi|433637754|ref|YP_007283514.1| - 0.27 10.8 4.1 0.48 9.9 4.1 1.3 1 0 0 1 1 1 0 TMCO5 family TMF_DNA_bd PF12329.8 gi|433637754|ref|YP_007283514.1| - 0.38 10.8 11.0 1.4 8.9 11.0 2.0 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF4201 PF13870.6 gi|433637754|ref|YP_007283514.1| - 0.41 10.4 10.2 6.5 6.4 10.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) SHE3 PF17078.5 gi|433637754|ref|YP_007283514.1| - 0.41 10.3 7.8 0.4 10.4 5.8 1.8 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 JIP_LZII PF16471.5 gi|433637754|ref|YP_007283514.1| - 0.45 10.7 11.8 0.94 9.7 8.2 2.4 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DUF2205 PF10224.9 gi|433637754|ref|YP_007283514.1| - 0.47 10.5 5.0 1.5 8.8 5.0 1.8 1 0 0 1 1 1 0 Short coiled-coil protein DUF3552 PF12072.8 gi|433637754|ref|YP_007283514.1| - 0.48 9.8 9.6 0.93 8.9 9.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Prominin PF05478.11 gi|433637754|ref|YP_007283514.1| - 0.61 8.0 1.9 0.83 7.5 1.9 1.1 1 0 0 1 1 1 0 Prominin Cep57_CLD_2 PF14197.6 gi|433637754|ref|YP_007283514.1| - 0.76 9.9 11.0 2.5 8.3 11.0 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 AAA_13 PF13166.6 gi|433637754|ref|YP_007283514.1| - 1 7.9 7.4 0.66 8.5 5.7 1.4 1 1 0 1 1 1 0 AAA domain GIT_CC PF16559.5 gi|433637754|ref|YP_007283514.1| - 1 9.3 6.6 0.68 9.8 2.6 2.3 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Prefoldin PF02996.17 gi|433637754|ref|YP_007283514.1| - 1.1 9.1 5.2 3.6 7.5 5.1 1.9 1 1 0 1 1 1 0 Prefoldin subunit Spc24 PF08286.11 gi|433637754|ref|YP_007283514.1| - 1.4 9.2 5.9 3 8.1 5.1 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 BLOC1_2 PF10046.9 gi|433637754|ref|YP_007283514.1| - 1.5 9.1 6.0 7.2 7.0 5.9 2.1 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FlaC_arch PF05377.11 gi|433637754|ref|YP_007283514.1| - 1.8 9.0 4.5 5.5 7.5 4.5 1.9 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF2203 PF09969.9 gi|433637754|ref|YP_007283514.1| - 1.9 9.2 4.0 5.6 7.7 4.0 1.8 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Macoilin PF09726.9 gi|433637754|ref|YP_007283514.1| - 2.7 6.4 22.1 4.5 5.7 22.1 1.4 1 0 0 1 1 1 0 Macoilin family DUF2730 PF10805.8 gi|433637754|ref|YP_007283514.1| - 2.9 8.0 4.5 5.7 7.1 4.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Med21 PF11221.8 gi|433637754|ref|YP_007283514.1| - 4 7.7 17.9 13 6.0 17.9 2.1 1 1 0 1 1 1 0 Subunit 21 of Mediator complex DUF4094 PF13334.6 gi|433637754|ref|YP_007283514.1| - 5.2 7.6 7.3 7.1 7.1 6.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Cluap1 PF10234.9 gi|433637754|ref|YP_007283514.1| - 5.6 6.3 10.3 9 5.6 10.3 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 SlyX PF04102.12 gi|433637754|ref|YP_007283514.1| - 6.1 7.5 8.3 37 5.0 8.3 2.3 1 1 0 1 1 1 0 SlyX DUF724 PF05266.14 gi|433637754|ref|YP_007283514.1| - 7.9 6.3 13.4 0.064 13.1 4.4 1.9 2 0 0 2 2 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 gi|433637754|ref|YP_007283514.1| - 9.8 6.2 9.3 17 5.4 9.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus UPF0058 PF01893.16 gi|433637755|ref|YP_007283515.1| - 2.3e-31 107.9 0.6 2.6e-31 107.7 0.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 ABC_tran PF00005.27 gi|433637756|ref|YP_007283516.1| - 7.5e-35 120.4 0.0 1.4e-34 119.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|433637756|ref|YP_007283516.1| - 3.2e-11 43.2 0.5 1.5e-10 41.0 0.2 2.4 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|433637756|ref|YP_007283516.1| - 2.1e-06 27.8 0.1 0.021 14.7 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|433637756|ref|YP_007283516.1| - 0.00054 19.9 0.0 0.00092 19.2 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|433637756|ref|YP_007283516.1| - 0.0055 17.1 0.0 0.021 15.2 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433637756|ref|YP_007283516.1| - 0.012 15.9 0.4 0.03 14.6 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|433637756|ref|YP_007283516.1| - 0.013 15.9 0.3 0.024 15.0 0.2 1.6 1 1 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|433637756|ref|YP_007283516.1| - 0.041 14.1 0.6 0.36 11.1 0.6 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 gi|433637756|ref|YP_007283516.1| - 0.059 13.5 0.0 0.17 12.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433637756|ref|YP_007283516.1| - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 gi|433637756|ref|YP_007283516.1| - 0.2 11.1 0.0 1 8.8 0.0 1.9 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain T2SSE PF00437.20 gi|433637758|ref|YP_007283518.1| - 2.1e-51 174.6 0.0 3.1e-51 174.0 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein RNase_II_C_S1 PF18614.1 gi|433637758|ref|YP_007283518.1| - 0.068 13.1 0.1 0.2 11.6 0.1 1.9 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain AAA_29 PF13555.6 gi|433637758|ref|YP_007283518.1| - 0.12 12.2 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SSF PF00482.23 gi|433637759|ref|YP_007283519.1| - 7e-38 129.4 9.3 6.8e-19 68.0 0.9 3.0 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F Methyltransf_11 PF08241.12 gi|433637760|ref|YP_007283520.1| - 1.4e-20 73.7 0.1 2.2e-20 73.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637760|ref|YP_007283520.1| - 2.7e-19 69.6 0.1 4.7e-19 68.9 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637760|ref|YP_007283520.1| - 2.1e-12 47.1 0.0 2.8e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637760|ref|YP_007283520.1| - 1.1e-11 45.3 0.1 1.7e-11 44.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637760|ref|YP_007283520.1| - 4.3e-10 39.3 0.0 5.5e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|433637760|ref|YP_007283520.1| - 1.8e-09 37.6 0.0 2.6e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|433637760|ref|YP_007283520.1| - 3.2e-05 23.9 0.0 0.00056 19.8 0.0 2.0 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|433637760|ref|YP_007283520.1| - 0.02 14.9 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 gi|433637760|ref|YP_007283520.1| - 0.022 14.5 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DUF4157 PF13699.6 gi|433637763|ref|YP_007283523.1| - 4e-31 107.1 1.7 1.1e-30 105.7 1.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) Peptidase_M91 PF14891.6 gi|433637763|ref|YP_007283523.1| - 0.12 12.7 1.1 0.47 10.7 0.1 2.0 2 0 0 2 2 2 0 Effector protein Peptidase_M78 PF06114.13 gi|433637763|ref|YP_007283523.1| - 0.13 12.2 0.1 0.26 11.2 0.1 1.5 1 0 0 1 1 1 0 IrrE N-terminal-like domain DUF2014 PF09427.10 gi|433637764|ref|YP_007283524.1| - 0.18 11.1 0.1 0.27 10.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) DUF4157 PF13699.6 gi|433637765|ref|YP_007283525.1| - 8.3e-17 61.2 0.1 1.2e-15 57.5 0.0 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) VKG_Carbox PF05090.14 gi|433637767|ref|YP_007283527.1| - 4.6e-09 35.6 0.4 6.5e-09 35.1 0.4 1.1 1 0 0 1 1 1 1 Vitamin K-dependent gamma-carboxylase NOB1_Zn_bind PF08772.11 gi|433637768|ref|YP_007283528.1| - 0.027 14.6 1.2 0.28 11.4 0.1 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Rpr2 PF04032.16 gi|433637768|ref|YP_007283528.1| - 0.03 14.6 0.5 0.037 14.3 0.5 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF2387 PF09526.10 gi|433637768|ref|YP_007283528.1| - 0.096 12.8 2.1 0.25 11.5 2.2 1.8 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Acetyltransf_1 PF00583.25 gi|433637769|ref|YP_007283529.1| - 5.4e-10 39.5 0.8 8e-10 39.0 0.1 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433637769|ref|YP_007283529.1| - 6.8e-06 26.0 0.0 1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433637769|ref|YP_007283529.1| - 0.0014 18.8 0.0 0.0027 17.8 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.7 gi|433637769|ref|YP_007283529.1| - 0.0019 18.6 0.1 0.0032 17.9 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|433637769|ref|YP_007283529.1| - 0.022 14.9 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain XPG_I PF00867.18 gi|433637770|ref|YP_007283530.1| - 5.3e-22 78.0 0.0 9.5e-22 77.2 0.0 1.4 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|433637770|ref|YP_007283530.1| - 2.6e-13 50.3 0.0 4.7e-13 49.5 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|433637770|ref|YP_007283530.1| - 2.2e-05 25.0 0.0 5.4e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold 5_3_exonuc_N PF02739.16 gi|433637770|ref|YP_007283530.1| - 0.011 15.6 0.0 0.017 15.0 0.0 1.4 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain HHH_5 PF14520.6 gi|433637770|ref|YP_007283530.1| - 0.11 13.1 0.0 0.35 11.5 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain Pyr_redox_2 PF07992.14 gi|433637771|ref|YP_007283531.1| - 2.8e-30 105.6 1.9 3.8e-30 105.1 1.9 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433637771|ref|YP_007283531.1| - 2e-11 44.3 0.3 1.9e-08 34.7 0.2 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|433637771|ref|YP_007283531.1| - 0.00068 19.3 12.2 2 7.9 0.3 4.4 4 1 1 5 5 5 3 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433637771|ref|YP_007283531.1| - 0.016 15.4 2.5 2.3 8.5 0.1 3.4 4 0 0 4 4 4 0 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|433637771|ref|YP_007283531.1| - 0.025 14.5 2.6 1.3 9.0 0.1 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|433637771|ref|YP_007283531.1| - 0.11 11.8 1.4 1.1 8.5 0.0 2.4 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Pilus_CpaD PF09476.10 gi|433637771|ref|YP_007283531.1| - 0.14 11.8 1.5 0.15 11.7 0.1 1.6 2 0 0 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) S_4TM PF18159.1 gi|433637772|ref|YP_007283532.1| - 0.58 9.4 2.4 0.61 9.3 2.4 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain ParBc PF02195.18 gi|433637773|ref|YP_007283533.1| - 4.5e-05 23.6 0.0 7.9e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain MDD_C PF18376.1 gi|433637774|ref|YP_007283534.1| - 2.4e-06 27.4 0.0 3.9e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 gi|433637774|ref|YP_007283534.1| - 0.00054 20.1 7.9 0.0015 18.7 7.0 2.2 1 1 1 2 2 2 1 GHMP kinases N terminal domain TarH PF02203.15 gi|433637774|ref|YP_007283534.1| - 0.1 12.5 1.8 0.13 12.2 0.7 1.7 2 0 0 2 2 2 0 Tar ligand binding domain homologue Baculo_PEP_C PF04513.12 gi|433637775|ref|YP_007283535.1| - 1e-05 25.6 12.8 0.0035 17.4 4.6 3.4 2 1 1 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 gi|433637775|ref|YP_007283535.1| - 3.6e-05 23.8 11.6 0.00014 21.9 2.7 3.5 2 2 1 3 3 3 1 Protein of unknown function (DUF1664) Apolipoprotein PF01442.18 gi|433637775|ref|YP_007283535.1| - 4.2e-05 23.5 36.7 0.082 12.8 36.7 2.7 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain ApoLp-III PF07464.11 gi|433637775|ref|YP_007283535.1| - 0.00023 21.3 1.2 0.00023 21.3 1.2 2.9 2 2 1 3 3 3 1 Apolipophorin-III precursor (apoLp-III) Spc7 PF08317.11 gi|433637775|ref|YP_007283535.1| - 0.00033 19.7 20.6 0.0015 17.5 7.7 2.1 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF4795 PF16043.5 gi|433637775|ref|YP_007283535.1| - 0.0013 18.4 18.8 0.21 11.1 18.8 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 gi|433637775|ref|YP_007283535.1| - 0.0014 18.9 7.0 0.69 10.1 2.8 3.5 1 1 2 3 3 3 1 Fibrinogen alpha/beta chain family EzrA PF06160.12 gi|433637775|ref|YP_007283535.1| - 0.0014 16.9 7.6 0.091 10.9 3.3 2.3 2 0 0 2 2 2 2 Septation ring formation regulator, EzrA Exonuc_VII_L PF02601.15 gi|433637775|ref|YP_007283535.1| - 0.002 17.8 5.4 0.018 14.6 0.5 2.1 2 0 0 2 2 2 1 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 gi|433637775|ref|YP_007283535.1| - 0.0024 17.8 15.0 0.13 12.3 1.3 4.4 2 2 1 3 3 3 1 Prefoldin subunit Tropomyosin_1 PF12718.7 gi|433637775|ref|YP_007283535.1| - 0.0026 17.9 13.0 0.0026 17.9 13.0 3.1 1 1 2 3 3 3 1 Tropomyosin like HSCB_C PF07743.13 gi|433637775|ref|YP_007283535.1| - 0.0039 17.6 5.9 0.0039 17.6 5.9 5.1 2 2 2 4 4 3 1 HSCB C-terminal oligomerisation domain DUF5082 PF16888.5 gi|433637775|ref|YP_007283535.1| - 0.0046 17.2 3.2 0.0046 17.2 3.2 3.1 1 1 2 3 3 3 1 Domain of unknown function (DUF5082) DUF883 PF05957.13 gi|433637775|ref|YP_007283535.1| - 0.0061 17.1 3.3 0.0061 17.1 3.3 3.7 2 2 2 4 4 4 1 Bacterial protein of unknown function (DUF883) XhlA PF10779.9 gi|433637775|ref|YP_007283535.1| - 0.0074 16.5 21.0 0.25 11.6 2.5 5.3 4 1 1 5 5 3 1 Haemolysin XhlA DUF3552 PF12072.8 gi|433637775|ref|YP_007283535.1| - 0.0097 15.3 7.8 0.0097 15.3 7.8 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF3552) PIN_8 PF18476.1 gi|433637775|ref|YP_007283535.1| - 0.022 14.6 9.4 0.057 13.3 1.4 2.4 2 1 0 2 2 2 0 PIN like domain FAM76 PF16046.5 gi|433637775|ref|YP_007283535.1| - 0.022 14.1 8.1 0.054 12.8 1.6 2.7 1 1 1 3 3 3 0 FAM76 protein Syntaxin-6_N PF09177.11 gi|433637775|ref|YP_007283535.1| - 0.027 15.0 24.7 0.94 10.1 1.4 4.3 2 2 2 4 4 4 0 Syntaxin 6, N-terminal CLZ PF16526.5 gi|433637775|ref|YP_007283535.1| - 0.03 14.7 20.0 9.4 6.7 6.0 5.7 3 1 3 6 6 6 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HSBP1 PF06825.12 gi|433637775|ref|YP_007283535.1| - 0.039 13.8 16.0 0.25 11.2 0.3 5.6 5 1 0 5 5 5 0 Heat shock factor binding protein 1 Mod_r PF07200.13 gi|433637775|ref|YP_007283535.1| - 0.041 14.0 13.1 0.63 10.1 2.7 3.1 2 1 1 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF4618 PF15397.6 gi|433637775|ref|YP_007283535.1| - 0.042 13.3 10.7 1 8.7 1.5 3.6 2 2 1 3 3 3 0 Domain of unknown function (DUF4618) OmpH PF03938.14 gi|433637775|ref|YP_007283535.1| - 0.044 14.1 14.1 0.37 11.1 2.0 3.1 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) CdvA PF18822.1 gi|433637775|ref|YP_007283535.1| - 0.052 13.4 12.5 2.1 8.2 0.5 4.5 2 2 2 4 4 4 0 CdvA-like coiled-coil domain Allexi_40kDa PF05549.11 gi|433637775|ref|YP_007283535.1| - 0.067 12.7 6.2 0.44 10.0 1.1 2.7 1 1 0 2 2 2 0 Allexivirus 40kDa protein NPV_P10 PF05531.12 gi|433637775|ref|YP_007283535.1| - 0.09 13.3 15.1 1.1 9.8 2.0 4.6 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF148 PF02520.17 gi|433637775|ref|YP_007283535.1| - 0.1 12.7 5.9 0.05 13.7 1.4 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF148 YabA PF06156.13 gi|433637775|ref|YP_007283535.1| - 0.1 13.2 7.3 33 5.2 0.1 3.7 1 1 1 2 2 2 0 Initiation control protein YabA Phage_Mu_Gam PF07352.12 gi|433637775|ref|YP_007283535.1| - 0.12 12.3 9.0 3.4 7.6 0.1 3.8 2 2 1 3 3 3 0 Bacteriophage Mu Gam like protein Fzo_mitofusin PF04799.13 gi|433637775|ref|YP_007283535.1| - 0.12 11.9 11.2 0.55 9.8 0.3 3.6 2 2 2 4 4 4 0 fzo-like conserved region FlaC_arch PF05377.11 gi|433637775|ref|YP_007283535.1| - 0.14 12.6 12.5 24 5.4 0.2 5.4 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) KxDL PF10241.9 gi|433637775|ref|YP_007283535.1| - 0.14 12.4 4.5 1.1 9.6 0.1 3.3 2 2 1 4 4 3 0 Uncharacterized conserved protein DASH_Spc19 PF08287.11 gi|433637775|ref|YP_007283535.1| - 0.18 11.7 18.2 0.51 10.2 1.5 4.0 1 1 3 4 4 4 0 Spc19 DUF3584 PF12128.8 gi|433637775|ref|YP_007283535.1| - 0.2 9.1 23.8 0.037 11.6 17.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran_CTD PF16326.5 gi|433637775|ref|YP_007283535.1| - 0.2 11.9 29.5 3.2 8.1 3.7 5.0 2 2 3 6 6 6 0 ABC transporter C-terminal domain FAM184 PF15665.5 gi|433637775|ref|YP_007283535.1| - 0.22 11.3 14.9 0.067 13.0 5.2 2.4 2 0 0 2 2 2 0 Family with sequence similarity 184, A and B FlxA PF14282.6 gi|433637775|ref|YP_007283535.1| - 0.23 11.4 6.2 0.58 10.2 0.2 2.8 2 1 0 3 3 2 0 FlxA-like protein ApoO PF09769.9 gi|433637775|ref|YP_007283535.1| - 0.25 11.3 0.6 1.4 8.9 0.1 2.5 2 2 0 2 2 1 0 Apolipoprotein O Lectin_N PF03954.14 gi|433637775|ref|YP_007283535.1| - 0.28 10.9 5.5 0.57 9.9 1.1 2.5 2 2 0 2 2 2 0 Hepatic lectin, N-terminal domain Atg14 PF10186.9 gi|433637775|ref|YP_007283535.1| - 0.28 10.2 9.5 0.053 12.6 3.4 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 MtrB PF05440.12 gi|433637775|ref|YP_007283535.1| - 0.32 11.4 5.2 68 4.0 0.1 4.4 2 2 3 5 5 4 0 Tetrahydromethanopterin S-methyltransferase subunit B Spectrin PF00435.21 gi|433637775|ref|YP_007283535.1| - 0.33 11.4 18.6 6.8 7.2 3.1 4.2 1 1 3 4 4 4 0 Spectrin repeat DUF4200 PF13863.6 gi|433637775|ref|YP_007283535.1| - 0.46 10.9 16.9 6 7.3 5.5 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4200) TolA_bind_tri PF16331.5 gi|433637775|ref|YP_007283535.1| - 0.46 10.6 19.1 0.062 13.4 2.3 4.9 2 2 2 4 4 4 0 TolA binding protein trimerisation Dynactin_p22 PF07426.11 gi|433637775|ref|YP_007283535.1| - 0.48 10.3 9.5 1 9.2 3.6 2.7 2 1 0 3 3 2 0 Dynactin subunit p22 YojJ PF10372.9 gi|433637775|ref|YP_007283535.1| - 0.5 10.5 5.3 5.2 7.2 0.3 3.1 3 1 1 4 4 2 0 Bacterial membrane-spanning protein N-terminus ACP_PD PF04336.12 gi|433637775|ref|YP_007283535.1| - 0.52 10.8 2.1 1.4 9.4 0.1 2.6 3 0 0 3 3 1 0 Acyl carrier protein phosphodiesterase FapA PF03961.13 gi|433637775|ref|YP_007283535.1| - 0.56 8.8 3.4 0.43 9.1 0.9 1.8 2 0 0 2 2 2 0 Flagellar Assembly Protein A T3SS_needle_F PF09392.10 gi|433637775|ref|YP_007283535.1| - 0.61 10.3 8.0 7.2 6.9 0.0 4.2 2 2 0 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BLOC1_2 PF10046.9 gi|433637775|ref|YP_007283535.1| - 0.66 10.3 16.2 3.7 7.9 0.3 4.5 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 KfrA_N PF11740.8 gi|433637775|ref|YP_007283535.1| - 0.68 10.6 38.5 0.059 14.1 7.2 3.9 1 1 3 4 4 4 0 Plasmid replication region DNA-binding N-term YlqD PF11068.8 gi|433637775|ref|YP_007283535.1| - 0.69 10.3 5.8 0.82 10.1 0.6 2.6 2 1 0 2 2 2 0 YlqD protein DUF4854 PF16146.5 gi|433637775|ref|YP_007283535.1| - 0.71 10.2 9.2 0.86 10.0 0.4 3.3 2 2 1 3 3 2 0 Domain of unknown function (DUF4854) Prominin PF05478.11 gi|433637775|ref|YP_007283535.1| - 0.75 7.7 3.1 1.7 6.5 3.1 1.6 1 1 0 1 1 1 0 Prominin Muted PF14942.6 gi|433637775|ref|YP_007283535.1| - 0.92 9.8 10.3 0.17 12.2 3.4 2.6 2 1 1 3 3 3 0 Organelle biogenesis, Muted-like protein Phage_GP20 PF06810.11 gi|433637775|ref|YP_007283535.1| - 0.93 9.3 16.1 0.088 12.6 4.3 3.6 2 2 1 3 3 3 0 Phage minor structural protein GP20 CENP-F_leu_zip PF10473.9 gi|433637775|ref|YP_007283535.1| - 0.98 9.4 24.5 3.7 7.6 13.0 3.2 2 2 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4988 PF16378.5 gi|433637775|ref|YP_007283535.1| - 1 9.0 5.8 10 5.8 0.4 3.8 2 2 1 3 3 3 0 Domain of unknown function FUSC PF04632.12 gi|433637775|ref|YP_007283535.1| - 1 7.8 24.2 0.57 8.7 4.2 2.2 2 0 0 2 2 2 0 Fusaric acid resistance protein family RasGAP_C PF03836.15 gi|433637775|ref|YP_007283535.1| - 1.1 9.4 5.4 0.55 10.4 0.9 2.6 3 1 0 3 3 1 0 RasGAP C-terminus SF-assemblin PF06705.11 gi|433637775|ref|YP_007283535.1| - 1.2 8.4 13.3 0.18 11.1 0.3 3.0 2 1 1 3 3 3 0 SF-assemblin/beta giardin FemAB PF02388.16 gi|433637775|ref|YP_007283535.1| - 1.3 7.8 7.7 0.69 8.7 1.4 2.3 2 1 0 2 2 2 0 FemAB family DUF1043 PF06295.12 gi|433637775|ref|YP_007283535.1| - 1.3 9.0 5.6 5.5 7.0 0.2 3.1 2 2 1 3 3 3 0 Protein of unknown function (DUF1043) PCRF PF03462.18 gi|433637775|ref|YP_007283535.1| - 1.3 8.8 15.2 4 7.3 5.8 2.3 2 0 0 2 2 2 0 PCRF domain Spore_III_AB PF09548.10 gi|433637775|ref|YP_007283535.1| - 1.8 8.7 4.2 3.5 7.7 0.2 2.5 2 1 1 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) Tropomyosin PF00261.20 gi|433637775|ref|YP_007283535.1| - 2 7.7 33.0 0.4 10.0 8.1 3.3 1 1 1 2 2 2 0 Tropomyosin DUF4407 PF14362.6 gi|433637775|ref|YP_007283535.1| - 2.2 7.6 27.9 2.8 7.2 0.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) LXG PF04740.12 gi|433637775|ref|YP_007283535.1| - 2.2 7.9 11.9 0.69 9.6 4.1 3.3 3 2 0 3 3 2 0 LXG domain of WXG superfamily Fmp27_WPPW PF10359.9 gi|433637775|ref|YP_007283535.1| - 2.2 7.0 12.0 5.9 5.6 1.3 2.6 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain COG2 PF06148.11 gi|433637775|ref|YP_007283535.1| - 2.4 8.2 12.0 17 5.5 0.3 3.6 2 2 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Cep57_MT_bd PF06657.13 gi|433637775|ref|YP_007283535.1| - 2.7 8.5 16.1 4.6 7.8 0.2 4.4 2 2 2 4 4 3 0 Centrosome microtubule-binding domain of Cep57 TMPIT PF07851.13 gi|433637775|ref|YP_007283535.1| - 2.9 7.1 3.9 2.1 7.5 0.9 2.0 2 0 0 2 2 2 0 TMPIT-like protein Prefoldin PF02996.17 gi|433637775|ref|YP_007283535.1| - 2.9 7.8 15.7 4.7 7.2 1.1 5.0 3 2 3 6 6 6 0 Prefoldin subunit CCDC-167 PF15188.6 gi|433637775|ref|YP_007283535.1| - 2.9 8.3 19.4 0.087 13.2 5.7 3.8 2 2 1 3 3 3 0 Coiled-coil domain-containing protein 167 MscS_porin PF12795.7 gi|433637775|ref|YP_007283535.1| - 3.1 7.3 29.5 6.7 6.2 9.3 3.0 1 1 2 3 3 3 0 Mechanosensitive ion channel porin domain DUF4455 PF14643.6 gi|433637775|ref|YP_007283535.1| - 3.2 6.3 16.8 0.24 10.0 6.5 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4455) CDPS PF16715.5 gi|433637775|ref|YP_007283535.1| - 3.7 7.1 7.5 1.2 8.7 3.7 2.0 2 1 0 2 2 2 0 Cyclodipeptide synthase Tnp_22_trimer PF17489.2 gi|433637775|ref|YP_007283535.1| - 4.3 7.4 6.9 17 5.4 1.3 3.1 2 0 0 2 2 2 0 L1 transposable element trimerization domain V_ATPase_I PF01496.19 gi|433637775|ref|YP_007283535.1| - 4.6 5.0 7.5 2.4 6.0 2.2 2.1 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Fez1 PF06818.15 gi|433637775|ref|YP_007283535.1| - 5.2 7.5 16.2 1.3 9.5 4.6 2.6 2 1 0 2 2 2 0 Fez1 Macoilin PF09726.9 gi|433637775|ref|YP_007283535.1| - 5.3 5.5 14.8 5.3 5.5 4.5 2.1 1 1 1 2 2 2 0 Macoilin family LUC7 PF03194.15 gi|433637775|ref|YP_007283535.1| - 5.4 6.6 8.8 4.9 6.7 1.2 2.2 2 0 0 2 2 2 0 LUC7 N_terminus PLAC9 PF15205.6 gi|433637775|ref|YP_007283535.1| - 5.5 7.5 7.8 45 4.5 0.8 3.8 3 1 2 5 5 3 0 Placenta-specific protein 9 SlyX PF04102.12 gi|433637775|ref|YP_007283535.1| - 5.6 7.7 26.6 5.1 7.8 1.7 4.9 3 2 2 5 5 4 0 SlyX PspB PF06667.12 gi|433637775|ref|YP_007283535.1| - 7.9 6.6 23.7 4.3 7.5 0.3 5.4 2 2 3 5 5 4 0 Phage shock protein B DUF948 PF06103.11 gi|433637775|ref|YP_007283535.1| - 9.3 6.6 11.7 15 5.9 2.3 3.9 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Matrilin_ccoil PF10393.9 gi|433637775|ref|YP_007283535.1| - 9.4 6.2 12.2 31 4.5 0.7 4.6 4 1 0 4 4 3 0 Trimeric coiled-coil oligomerisation domain of matrilin EMP24_GP25L PF01105.24 gi|433637775|ref|YP_007283535.1| - 9.9 6.1 9.2 5.8 6.8 0.3 3.2 2 2 0 2 2 2 0 emp24/gp25L/p24 family/GOLD HhH-GPD PF00730.25 gi|433637776|ref|YP_007283536.1| - 1.5e-23 83.3 0.0 1.9e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|433637776|ref|YP_007283536.1| - 8.5e-11 41.2 0.0 2.2e-10 39.9 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|433637776|ref|YP_007283536.1| - 1.8e-07 31.3 4.8 1.8e-07 31.3 4.8 1.6 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|433637776|ref|YP_007283536.1| - 0.00028 21.4 0.0 0.0071 16.9 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|433637776|ref|YP_007283536.1| - 0.034 14.5 0.0 0.081 13.3 0.0 1.7 1 1 0 1 1 1 0 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|433637776|ref|YP_007283536.1| - 0.063 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold IMS_HHH PF11798.8 gi|433637776|ref|YP_007283536.1| - 0.11 12.9 0.0 0.27 11.7 0.0 1.6 1 0 0 1 1 1 0 IMS family HHH motif LPD29 PF18847.1 gi|433637776|ref|YP_007283536.1| - 0.12 13.3 0.0 0.19 12.7 0.0 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 29 NAD_kinase PF01513.21 gi|433637778|ref|YP_007283538.1| - 4.7e-12 45.7 0.1 7e-12 45.1 0.1 1.2 1 0 0 1 1 1 1 ATP-NAD kinase polyprenyl_synt PF00348.17 gi|433637779|ref|YP_007283539.1| - 2.3e-57 194.0 0.0 2.7e-57 193.7 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase EF-hand_11 PF08976.11 gi|433637780|ref|YP_007283540.1| - 0.093 13.6 0.1 0.29 12.0 0.1 1.7 2 0 0 2 2 2 0 EF-hand domain CbtA PF09490.10 gi|433637781|ref|YP_007283541.1| - 0.046 13.5 6.5 0.076 12.8 0.8 2.0 1 1 1 2 2 2 0 Probable cobalt transporter subunit (CbtA) Phage_holin_5_2 PF16079.5 gi|433637781|ref|YP_007283541.1| - 5.7 7.4 10.5 13 6.2 3.8 2.3 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V RNA_POL_M_15KD PF02150.16 gi|433637782|ref|YP_007283542.1| - 9.6e-10 38.2 4.0 3.8e-09 36.3 2.1 2.3 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit OrfB_Zn_ribbon PF07282.11 gi|433637782|ref|YP_007283542.1| - 6.4e-05 22.8 5.9 0.0017 18.2 1.2 2.2 2 0 0 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|433637782|ref|YP_007283542.1| - 0.0051 16.2 2.8 0.27 10.7 0.7 2.7 2 0 0 2 2 2 1 zinc-ribbon domain TFIIS_C PF01096.18 gi|433637782|ref|YP_007283542.1| - 0.0095 15.8 0.6 0.0095 15.8 0.6 3.8 4 0 0 4 4 4 1 Transcription factor S-II (TFIIS) DZR PF12773.7 gi|433637782|ref|YP_007283542.1| - 0.013 15.5 1.3 0.013 15.5 1.3 2.5 2 1 0 2 2 2 0 Double zinc ribbon zf-RRN7 PF11781.8 gi|433637782|ref|YP_007283542.1| - 0.063 13.0 8.8 8.3 6.2 0.2 4.2 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf_UBZ PF18439.1 gi|433637782|ref|YP_007283542.1| - 0.23 11.1 7.1 1.8 8.2 0.1 3.2 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger C1_1 PF00130.22 gi|433637782|ref|YP_007283542.1| - 0.64 9.9 6.1 0.46 10.4 2.7 2.1 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-UBP PF02148.19 gi|433637782|ref|YP_007283542.1| - 0.85 10.0 5.7 8.1 6.9 0.9 2.2 2 0 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein Rubredoxin_2 PF18073.1 gi|433637782|ref|YP_007283542.1| - 0.86 9.4 9.5 19 5.1 0.3 3.2 2 1 1 3 3 3 0 Rubredoxin metal binding domain DUF2318 PF10080.9 gi|433637782|ref|YP_007283542.1| - 1.3 9.2 4.1 2.1 8.5 1.0 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2318) zinc-ribbons_6 PF07191.12 gi|433637782|ref|YP_007283542.1| - 5 7.2 9.4 0.35 10.9 1.8 2.4 2 1 0 2 2 2 0 zinc-ribbons YhfH PF14149.6 gi|433637782|ref|YP_007283542.1| - 6 6.9 9.2 18 5.4 0.2 2.7 2 1 0 2 2 2 0 YhfH-like protein PHD PF00628.29 gi|433637782|ref|YP_007283542.1| - 6.2 6.8 12.1 60 3.6 6.5 3.2 2 2 0 2 2 2 0 PHD-finger PhnA_Zn_Ribbon PF08274.12 gi|433637782|ref|YP_007283542.1| - 6.9 6.7 12.0 20 5.3 0.2 3.5 3 1 0 3 3 3 0 PhnA Zinc-Ribbon IBR PF01485.21 gi|433637782|ref|YP_007283542.1| - 7.8 6.8 11.8 4 7.7 2.3 2.6 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Zip PF02535.22 gi|433637783|ref|YP_007283543.1| - 4.4 6.4 14.9 4.9 6.3 1.6 2.1 2 0 0 2 2 2 0 ZIP Zinc transporter Cadherin-like PF12733.7 gi|433637784|ref|YP_007283544.1| - 0.018 15.5 0.6 0.018 15.5 0.6 2.3 3 0 0 3 3 3 0 Cadherin-like beta sandwich domain Lambda_CIII PF02061.16 gi|433637784|ref|YP_007283544.1| - 0.24 11.5 0.8 12 6.0 0.1 2.5 2 0 0 2 2 2 0 Lambda Phage CIII AMP-binding PF00501.28 gi|433637785|ref|YP_007283545.1| - 2.4e-89 299.9 0.1 2.9e-89 299.6 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433637785|ref|YP_007283545.1| - 3.1e-23 82.5 1.5 6.7e-23 81.5 1.5 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|433637785|ref|YP_007283545.1| - 3.8e-13 49.1 0.9 3.8e-13 49.1 0.9 2.1 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus Methyltransf_25 PF13649.6 gi|433637786|ref|YP_007283546.1| - 3.5e-15 56.5 0.0 6e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433637786|ref|YP_007283546.1| - 2.9e-11 43.9 0.0 5e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637786|ref|YP_007283546.1| - 6.4e-10 38.8 0.0 9e-10 38.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|433637786|ref|YP_007283546.1| - 1.3e-09 38.1 0.0 2.3e-09 37.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637786|ref|YP_007283546.1| - 3.6e-08 34.0 0.0 7e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|433637786|ref|YP_007283546.1| - 2.3e-05 23.9 0.0 3.5e-05 23.3 0.0 1.3 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_31 PF13847.6 gi|433637786|ref|YP_007283546.1| - 3.4e-05 23.7 0.0 4.6e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433637786|ref|YP_007283546.1| - 0.0062 16.1 0.0 0.035 13.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_15 PF09445.10 gi|433637786|ref|YP_007283546.1| - 0.016 14.8 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase MOSC_N PF03476.16 gi|433637787|ref|YP_007283547.1| - 6e-16 58.4 0.3 1.7e-15 57.0 0.3 1.7 1 1 0 1 1 1 1 MOSC N-terminal beta barrel domain MOSC PF03473.17 gi|433637787|ref|YP_007283547.1| - 2.6e-08 33.9 0.0 5.5e-08 32.9 0.0 1.5 1 0 0 1 1 1 1 MOSC domain MM_CoA_mutase PF01642.22 gi|433637788|ref|YP_007283548.1| - 1e-214 713.9 0.1 1.1e-214 713.7 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Met_asp_mut_E PF06368.11 gi|433637788|ref|YP_007283548.1| - 0.064 11.7 0.1 0.11 11.0 0.1 1.3 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) ApoC-I PF04691.12 gi|433637788|ref|YP_007283548.1| - 0.14 12.1 0.1 0.44 10.5 0.1 1.8 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) ABC2_membrane PF01061.24 gi|433637789|ref|YP_007283549.1| - 4.5e-05 23.0 20.5 4.5e-05 23.0 20.5 2.1 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|433637789|ref|YP_007283549.1| - 0.0006 19.0 19.3 0.0006 19.0 19.3 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433637789|ref|YP_007283549.1| - 0.0091 16.0 11.6 0.0091 16.0 11.6 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF1077 PF06417.12 gi|433637789|ref|YP_007283549.1| - 0.042 13.9 2.7 0.13 12.3 2.7 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) ABC2_membrane_2 PF12679.7 gi|433637789|ref|YP_007283549.1| - 2.1 7.5 24.2 16 4.7 24.2 2.3 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|433637790|ref|YP_007283550.1| - 2.8e-28 99.2 0.0 5.4e-28 98.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637790|ref|YP_007283550.1| - 2.7e-12 47.1 0.3 7.5e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637790|ref|YP_007283550.1| - 0.0024 17.3 0.0 0.9 8.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF4162 PF13732.6 gi|433637790|ref|YP_007283550.1| - 0.0044 17.7 0.0 0.0091 16.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_33 PF13671.6 gi|433637790|ref|YP_007283550.1| - 0.012 15.8 0.3 5.5 7.1 0.0 2.7 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|433637790|ref|YP_007283550.1| - 0.018 15.6 0.2 0.035 14.6 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|433637790|ref|YP_007283550.1| - 0.051 13.8 0.9 0.53 10.6 0.8 2.2 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433637790|ref|YP_007283550.1| - 0.064 13.0 1.1 0.33 10.6 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|433637790|ref|YP_007283550.1| - 0.094 12.5 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain cobW PF02492.19 gi|433637790|ref|YP_007283550.1| - 0.14 11.7 1.0 0.72 9.4 0.4 2.3 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA PF00004.29 gi|433637790|ref|YP_007283550.1| - 0.22 11.9 1.6 2.7 8.4 1.5 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CBS PF00571.28 gi|433637791|ref|YP_007283551.1| - 4.9e-25 87.7 0.6 2.2e-11 44.0 0.1 2.7 3 0 0 3 3 3 2 CBS domain ParBc PF02195.18 gi|433637791|ref|YP_007283551.1| - 1.2e-08 35.2 0.1 4.1e-08 33.4 0.0 1.9 2 0 0 2 2 2 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|433637791|ref|YP_007283551.1| - 0.2 11.7 0.0 1.5 8.9 0.0 2.1 1 1 0 1 1 1 0 Putative ParB-like nuclease TrkA_N PF02254.18 gi|433637792|ref|YP_007283552.1| - 4.7e-15 55.9 0.0 1.1e-14 54.6 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain DHH PF01368.20 gi|433637792|ref|YP_007283552.1| - 2e-12 47.2 0.8 3.7e-12 46.4 0.8 1.5 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|433637792|ref|YP_007283552.1| - 3e-12 47.1 0.1 7.8e-12 45.8 0.1 1.7 1 0 0 1 1 1 1 DHHA1 domain Proton_antipo_M PF00361.20 gi|433637793|ref|YP_007283553.1| - 1.3e-66 224.8 20.0 1.3e-66 224.8 20.0 1.7 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|433637793|ref|YP_007283553.1| - 0.00013 21.9 1.4 0.00013 21.9 1.4 2.5 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|433637794|ref|YP_007283554.1| - 5.2e-72 242.5 26.5 5.2e-72 242.5 26.5 1.8 2 0 0 2 2 2 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 gi|433637794|ref|YP_007283554.1| - 4.4e-05 23.5 0.4 4.4e-05 23.5 0.4 3.2 3 1 0 4 4 4 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus Proton_antipo_N PF00662.20 gi|433637794|ref|YP_007283554.1| - 0.026 14.6 0.6 0.19 11.9 0.2 2.8 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|433637795|ref|YP_007283555.1| - 6.2e-76 255.4 19.6 1.1e-75 254.6 19.6 1.4 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|433637795|ref|YP_007283555.1| - 2.6e-18 65.9 3.2 1.4e-17 63.4 0.2 3.2 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q2 PF00420.24 gi|433637796|ref|YP_007283556.1| - 7.6e-21 73.7 10.8 9.4e-21 73.4 10.8 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPBP PF02517.16 gi|433637796|ref|YP_007283556.1| - 0.55 10.6 6.0 0.83 10.1 5.7 1.5 1 1 1 2 2 2 0 CPBP intramembrane metalloprotease DUF3413 PF11893.8 gi|433637797|ref|YP_007283557.1| - 0.13 11.5 0.3 0.2 10.8 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3413) Oxidored_q3 PF00499.20 gi|433637798|ref|YP_007283558.1| - 4.9e-22 78.2 2.2 7.1e-22 77.7 2.2 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Phage_holin_3_6 PF07332.11 gi|433637798|ref|YP_007283558.1| - 0.14 12.2 14.7 10 6.2 14.7 2.0 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Fer4 PF00037.27 gi|433637799|ref|YP_007283559.1| - 2e-12 46.3 8.7 1.9e-06 27.5 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|433637799|ref|YP_007283559.1| - 1.3e-11 44.9 10.5 2e-11 44.3 10.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|433637799|ref|YP_007283559.1| - 1.1e-10 42.3 3.6 1.3e-05 26.1 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|433637799|ref|YP_007283559.1| - 2.3e-09 37.2 8.3 3.3e-09 36.7 8.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433637799|ref|YP_007283559.1| - 4e-09 36.5 23.1 5.3e-07 29.7 12.6 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|433637799|ref|YP_007283559.1| - 1.1e-06 28.6 19.6 1.2e-05 25.3 11.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|433637799|ref|YP_007283559.1| - 4e-06 26.7 12.8 0.0032 17.5 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|433637799|ref|YP_007283559.1| - 7.2e-06 26.5 12.1 0.0048 17.4 1.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433637799|ref|YP_007283559.1| - 4.9e-05 23.2 12.3 0.0021 18.1 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|433637799|ref|YP_007283559.1| - 0.00011 22.6 11.2 0.0019 18.6 12.3 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|433637799|ref|YP_007283559.1| - 0.00052 20.8 15.1 0.018 16.0 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|433637799|ref|YP_007283559.1| - 0.0013 19.0 14.9 0.012 16.0 4.3 2.3 1 1 1 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|433637799|ref|YP_007283559.1| - 0.0016 18.6 9.6 0.077 13.2 1.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|433637799|ref|YP_007283559.1| - 0.0021 18.9 4.2 0.57 11.1 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|433637799|ref|YP_007283559.1| - 0.022 14.9 7.5 0.097 12.8 7.7 1.7 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S TNFR_c6 PF00020.18 gi|433637799|ref|YP_007283559.1| - 0.37 11.2 7.7 5.3 7.5 1.3 2.4 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region Fer4_13 PF13370.6 gi|433637799|ref|YP_007283559.1| - 2.7 8.6 13.6 3.4 8.3 3.1 2.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I NADHdh PF00146.21 gi|433637800|ref|YP_007283560.1| - 2.5e-92 309.4 18.9 3e-92 309.1 18.9 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.19 gi|433637801|ref|YP_007283561.1| - 5.9e-86 287.9 0.1 1.1e-84 283.8 0.1 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|433637801|ref|YP_007283561.1| - 9.9e-34 116.6 0.2 2.3e-33 115.4 0.2 1.7 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|433637802|ref|YP_007283562.1| - 8.1e-21 74.2 0.0 1.1e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|433637803|ref|YP_007283563.1| - 1.9e-31 108.1 0.1 2.4e-31 107.8 0.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AIRC PF00731.20 gi|433637804|ref|YP_007283564.1| - 1.9e-48 163.8 0.0 2.6e-48 163.3 0.0 1.1 1 0 0 1 1 1 1 AIR carboxylase ATP-grasp PF02222.22 gi|433637805|ref|YP_007283565.1| - 1.1e-48 165.0 0.0 4e-48 163.2 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|433637805|ref|YP_007283565.1| - 3.9e-20 71.3 0.2 8.3e-20 70.2 0.1 1.7 2 0 0 2 2 2 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|433637805|ref|YP_007283565.1| - 9.6e-08 31.8 0.0 2.8e-07 30.3 0.0 1.7 2 1 0 2 2 2 1 D-ala D-ala ligase C-terminus 2-Hacid_dh_C PF02826.19 gi|433637805|ref|YP_007283565.1| - 0.00053 19.4 0.0 0.00092 18.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATP-grasp_3 PF02655.14 gi|433637805|ref|YP_007283565.1| - 0.00059 19.9 0.0 0.0061 16.6 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|433637805|ref|YP_007283565.1| - 0.0036 16.8 0.0 0.013 15.0 0.0 1.9 2 0 0 2 2 2 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|433637805|ref|YP_007283565.1| - 0.0056 16.2 0.1 0.02 14.4 0.1 1.9 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.11 gi|433637805|ref|YP_007283565.1| - 0.0098 15.5 0.0 0.056 13.0 0.0 1.9 2 0 0 2 2 2 1 RimK-like ATP-grasp domain XdhC_C PF13478.6 gi|433637805|ref|YP_007283565.1| - 0.11 12.9 0.0 0.37 11.3 0.0 1.9 1 1 0 1 1 1 0 XdhC Rossmann domain DUF3494 PF11999.8 gi|433637806|ref|YP_007283566.1| - 2.5e-63 213.5 6.8 2.5e-63 213.5 6.8 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF3494) fn3 PF00041.21 gi|433637806|ref|YP_007283566.1| - 2.6e-17 62.9 0.0 0.013 15.8 0.2 5.6 5 0 0 5 5 5 4 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 gi|433637806|ref|YP_007283566.1| - 1.7e-14 54.1 0.0 0.053 14.1 0.0 5.9 3 1 2 5 5 5 4 Purple acid Phosphatase, N-terminal domain Cadherin-like PF12733.7 gi|433637806|ref|YP_007283566.1| - 0.043 14.3 2.7 12 6.5 0.1 5.3 6 0 0 6 6 6 0 Cadherin-like beta sandwich domain Dysbindin PF04440.16 gi|433637806|ref|YP_007283566.1| - 0.21 11.7 6.4 14 5.8 0.0 4.1 4 0 0 4 4 4 0 Dysbindin (Dystrobrevin binding protein 1) DUF4407 PF14362.6 gi|433637806|ref|YP_007283566.1| - 1.1 8.5 2.8 1.6 8.0 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) OEP PF02321.18 gi|433637806|ref|YP_007283566.1| - 3 7.6 4.3 5.7 6.7 4.3 1.4 1 0 0 1 1 1 0 Outer membrane efflux protein DMRL_synthase PF00885.19 gi|433637807|ref|YP_007283567.1| - 5.7e-30 104.0 0.2 6.8e-30 103.7 0.2 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Cadherin_4 PF17803.1 gi|433637807|ref|YP_007283567.1| - 0.013 16.1 4.2 0.024 15.3 3.5 2.0 1 1 0 1 1 1 0 Bacterial cadherin-like domain FlgT_N PF16548.5 gi|433637807|ref|YP_007283567.1| - 0.045 14.3 0.5 6.3 7.4 0.0 2.2 1 1 1 2 2 2 0 Flagellar assembly protein T, N-terminal domain Aminotran_1_2 PF00155.21 gi|433637808|ref|YP_007283568.1| - 3.2e-65 220.7 0.0 3.6e-65 220.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433637808|ref|YP_007283568.1| - 0.00013 21.1 0.0 0.00034 19.7 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|433637808|ref|YP_007283568.1| - 0.00095 17.8 0.0 0.0014 17.3 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|433637808|ref|YP_007283568.1| - 0.02 14.2 0.1 0.033 13.5 0.1 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Met_gamma_lyase PF06838.11 gi|433637808|ref|YP_007283568.1| - 0.072 11.6 0.0 0.11 11.0 0.0 1.2 1 0 0 1 1 1 0 Methionine gamma-lyase Cucumopine_C PF18631.1 gi|433637808|ref|YP_007283568.1| - 0.13 12.2 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain DUF2160 PF09928.9 gi|433637809|ref|YP_007283569.1| - 0.0036 17.6 0.9 0.0037 17.5 0.9 1.1 1 0 0 1 1 1 1 Predicted small integral membrane protein (DUF2160) CTP_transf_like PF01467.26 gi|433637810|ref|YP_007283570.1| - 7.4e-17 61.9 0.0 9.3e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|433637810|ref|YP_007283570.1| - 0.12 12.2 0.1 0.31 10.9 0.1 1.6 2 0 0 2 2 2 0 FAD synthetase Prok-JAB PF14464.6 gi|433637811|ref|YP_007283571.1| - 4.5e-10 39.3 0.0 7.1e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|433637811|ref|YP_007283571.1| - 0.0013 18.7 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain PAS_3 PF08447.12 gi|433637812|ref|YP_007283572.1| - 1.7e-13 50.7 0.0 3.4e-13 49.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|433637812|ref|YP_007283572.1| - 2.5e-08 34.4 0.0 4.6e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|433637812|ref|YP_007283572.1| - 1.2e-07 31.7 0.2 4.1e-07 30.0 0.2 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HisKA_4TM PF16926.5 gi|433637812|ref|YP_007283572.1| - 3.6e-05 23.4 0.2 0.00012 21.6 0.2 1.9 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HisKA PF00512.25 gi|433637812|ref|YP_007283572.1| - 0.021 14.9 0.9 0.052 13.6 0.0 2.1 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|433637812|ref|YP_007283572.1| - 0.029 14.6 0.0 0.078 13.2 0.0 1.8 1 0 0 1 1 1 0 PAS domain tRNA_anti-codon PF01336.25 gi|433637813|ref|YP_007283573.1| - 7.8e-07 29.0 0.1 1.6e-06 28.0 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|433637813|ref|YP_007283573.1| - 0.0018 18.6 1.3 0.0035 17.7 0.1 2.1 2 0 0 2 2 2 1 S1 RNA binding domain DHH PF01368.20 gi|433637813|ref|YP_007283573.1| - 0.0031 17.7 0.3 0.0067 16.6 0.3 1.6 1 0 0 1 1 1 1 DHH family tRNA_anti_2 PF13742.6 gi|433637813|ref|YP_007283573.1| - 0.19 12.0 0.0 0.52 10.6 0.0 1.7 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain DeoC PF01791.9 gi|433637814|ref|YP_007283574.1| - 1.5e-10 41.1 2.2 2.9e-10 40.2 2.2 1.4 1 1 0 1 1 1 1 DeoC/LacD family aldolase DHO_dh PF01180.21 gi|433637814|ref|YP_007283574.1| - 0.018 14.3 2.1 0.029 13.6 2.0 1.6 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|433637814|ref|YP_007283574.1| - 0.064 12.7 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein DUF63 PF01889.17 gi|433637815|ref|YP_007283575.1| - 1.8e-15 57.9 6.8 2.9e-15 57.2 6.8 1.2 1 1 0 1 1 1 1 Membrane protein of unknown function DUF63 PfkB PF00294.24 gi|433637816|ref|YP_007283576.1| - 5.8e-51 173.6 2.5 6.9e-51 173.3 2.5 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF5518 PF17647.1 gi|433637816|ref|YP_007283576.1| - 0.074 13.2 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5518) HalOD1 PF18545.1 gi|433637817|ref|YP_007283577.1| - 7.7e-21 74.1 0.2 9e-21 73.9 0.2 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 TrkA_N PF02254.18 gi|433637818|ref|YP_007283578.1| - 4.7e-26 91.3 0.2 7.6e-26 90.6 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|433637818|ref|YP_007283578.1| - 1.9e-12 46.9 3.6 1.9e-12 46.9 3.6 2.6 3 0 0 3 3 3 1 Ion channel Ion_trans PF00520.31 gi|433637818|ref|YP_007283578.1| - 0.0019 17.5 0.2 0.0026 17.0 0.2 1.3 1 0 0 1 1 1 1 Ion transport protein NAD_binding_7 PF13241.6 gi|433637818|ref|YP_007283578.1| - 0.0021 18.4 0.0 0.0054 17.1 0.0 1.7 1 1 0 1 1 1 1 Putative NAD(P)-binding NAD_binding_10 PF13460.6 gi|433637818|ref|YP_007283578.1| - 0.0095 15.8 0.4 0.019 14.9 0.4 1.5 1 0 0 1 1 1 1 NAD(P)H-binding IRK PF01007.20 gi|433637818|ref|YP_007283578.1| - 0.013 15.4 0.0 0.031 14.1 0.0 1.6 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Aldolase PF01081.19 gi|433637818|ref|YP_007283578.1| - 0.025 14.0 0.2 0.052 13.0 0.1 1.6 2 0 0 2 2 2 0 KDPG and KHG aldolase DUF1269 PF06897.12 gi|433637818|ref|YP_007283578.1| - 0.13 12.6 0.3 0.13 12.6 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) PLDc_2 PF13091.6 gi|433637820|ref|YP_007283580.1| - 9.6e-39 132.3 0.0 2.6e-20 72.7 0.0 2.4 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 gi|433637820|ref|YP_007283580.1| - 5.3e-08 32.7 1.9 4.2e-05 23.5 0.3 2.7 2 0 0 2 2 2 2 Phospholipase D Active site motif Regulator_TrmB PF11495.8 gi|433637820|ref|YP_007283580.1| - 0.069 12.3 0.0 5.5 6.1 0.0 2.3 2 0 0 2 2 2 0 Archaeal transcriptional regulator TrmB FAM83 PF07894.12 gi|433637820|ref|YP_007283580.1| - 0.087 12.4 0.0 7.8 6.0 0.0 2.2 2 0 0 2 2 2 0 FAM83 A-H HEAT_2 PF13646.6 gi|433637821|ref|YP_007283581.1| - 6.2e-20 71.4 14.7 1.5e-12 47.7 6.7 5.1 2 1 2 4 4 4 2 HEAT repeats HEAT_PBS PF03130.16 gi|433637821|ref|YP_007283581.1| - 1.2e-12 47.2 26.0 0.00085 19.8 0.7 7.6 8 0 0 8 8 7 3 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|433637821|ref|YP_007283581.1| - 1.8e-08 34.7 9.7 0.0011 19.5 0.4 5.6 4 1 1 5 5 5 2 HEAT-like repeat HEAT PF02985.22 gi|433637821|ref|YP_007283581.1| - 1.4e-05 24.9 2.6 0.1 12.9 0.1 4.0 4 0 0 4 4 4 2 HEAT repeat Arm PF00514.23 gi|433637821|ref|YP_007283581.1| - 0.00022 21.2 0.2 0.26 11.4 0.1 3.4 2 1 2 4 4 4 2 Armadillo/beta-catenin-like repeat DNA_alkylation PF08713.11 gi|433637821|ref|YP_007283581.1| - 0.0013 18.5 0.3 0.0031 17.3 0.3 1.6 1 1 0 1 1 1 1 DNA alkylation repair enzyme Syntaxin-6_N PF09177.11 gi|433637821|ref|YP_007283581.1| - 0.014 16.0 1.8 0.6 10.7 0.1 3.1 3 0 0 3 3 3 0 Syntaxin 6, N-terminal NPV_P10 PF05531.12 gi|433637821|ref|YP_007283581.1| - 0.02 15.3 0.3 0.02 15.3 0.3 3.2 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Cnd1 PF12717.7 gi|433637821|ref|YP_007283581.1| - 0.044 13.8 0.0 0.19 11.7 0.0 2.1 2 1 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 FlaC_arch PF05377.11 gi|433637821|ref|YP_007283581.1| - 0.087 13.2 0.0 0.53 10.7 0.0 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Vitellogenin_N PF01347.22 gi|433637821|ref|YP_007283581.1| - 0.17 10.2 0.0 0.25 9.7 0.0 1.2 1 0 0 1 1 1 0 Lipoprotein amino terminal region GAT PF03127.14 gi|433637821|ref|YP_007283581.1| - 0.3 11.4 1.8 0.95 9.8 0.1 2.7 3 0 0 3 3 3 0 GAT domain SlyX PF04102.12 gi|433637821|ref|YP_007283581.1| - 0.37 11.4 3.4 1.6 9.4 3.4 2.2 1 0 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 gi|433637821|ref|YP_007283581.1| - 3.2 8.1 9.7 3.6 7.9 1.8 3.1 3 0 0 3 3 3 0 ABC transporter C-terminal domain CDP-OH_P_transf PF01066.21 gi|433637822|ref|YP_007283582.1| - 5e-10 40.0 3.8 5e-10 40.0 3.8 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase PET117 PF15786.5 gi|433637822|ref|YP_007283582.1| - 0.15 12.3 0.1 0.56 10.5 0.1 1.9 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial Copper-bind PF00127.20 gi|433637823|ref|YP_007283583.1| - 4.4e-09 36.7 0.0 6.4e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|433637823|ref|YP_007283583.1| - 0.0099 16.0 0.0 4.3 7.5 0.0 2.1 2 0 0 2 2 2 2 Cupredoxin-like domain Ribosomal_S3Ae PF01015.18 gi|433637824|ref|YP_007283584.1| - 7.3e-59 198.8 0.2 9.2e-59 198.4 0.2 1.1 1 0 0 1 1 1 1 Ribosomal S3Ae family Ribosomal_S13_N PF08069.12 gi|433637827|ref|YP_007283587.1| - 7.5e-20 70.7 0.1 1.2e-19 70.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|433637827|ref|YP_007283587.1| - 4.4e-14 52.4 0.1 6.6e-14 51.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 HEPN_Apea PF18739.1 gi|433637828|ref|YP_007283588.1| - 0.00022 21.6 3.5 0.0011 19.4 3.5 2.0 1 1 0 1 1 1 1 Apea-like HEPN Fusion_gly PF00523.18 gi|433637828|ref|YP_007283588.1| - 0.047 11.9 0.1 0.092 11.0 0.0 1.4 2 0 0 2 2 2 0 Fusion glycoprotein F0 VPS11_C PF12451.8 gi|433637829|ref|YP_007283589.1| - 0.011 16.0 0.9 0.024 14.9 0.9 1.6 1 0 0 1 1 1 0 Vacuolar protein sorting protein 11 C terminal Peptidase_U49 PF10463.9 gi|433637829|ref|YP_007283589.1| - 0.031 14.0 0.1 0.11 12.2 0.0 1.8 2 0 0 2 2 2 0 Peptidase U49 DUF5082 PF16888.5 gi|433637829|ref|YP_007283589.1| - 0.077 13.3 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) BST2 PF16716.5 gi|433637829|ref|YP_007283589.1| - 0.15 12.6 0.8 0.41 11.3 0.3 1.9 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 FtsX PF02687.21 gi|433637830|ref|YP_007283590.1| - 1.5 9.4 10.4 2.6 8.6 0.4 2.4 1 1 1 2 2 2 0 FtsX-like permease family SPC12 PF06645.13 gi|433637830|ref|YP_007283590.1| - 5.4 7.2 6.7 4.5 7.4 0.5 2.7 2 1 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) TrmB PF01978.19 gi|433637832|ref|YP_007283592.1| - 7.7e-07 28.9 0.2 2.2e-06 27.5 0.1 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|433637832|ref|YP_007283592.1| - 0.00015 21.8 0.1 0.00035 20.6 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433637832|ref|YP_007283592.1| - 0.00099 18.6 0.0 0.0054 16.3 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433637832|ref|YP_007283592.1| - 0.0025 17.7 0.1 0.007 16.2 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433637832|ref|YP_007283592.1| - 0.012 15.4 0.0 0.03 14.1 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|433637832|ref|YP_007283592.1| - 0.037 13.9 0.0 0.085 12.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF1522 PF07482.11 gi|433637832|ref|YP_007283592.1| - 0.068 13.5 0.2 0.14 12.5 0.1 1.6 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1522) Penicillinase_R PF03965.16 gi|433637832|ref|YP_007283592.1| - 0.1 12.9 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor APH PF01636.23 gi|433637833|ref|YP_007283593.1| - 6.3e-22 78.7 11.7 8e-22 78.3 11.7 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 gi|433637833|ref|YP_007283593.1| - 0.00066 19.0 0.0 0.0027 16.9 0.0 1.8 1 1 0 1 1 1 1 Fructosamine kinase Methyltransf_11 PF08241.12 gi|433637834|ref|YP_007283594.1| - 9.7e-23 80.6 0.1 2e-22 79.6 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637834|ref|YP_007283594.1| - 1.8e-19 70.2 0.3 3.5e-19 69.3 0.1 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637834|ref|YP_007283594.1| - 1.1e-16 61.0 0.0 2.1e-16 60.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637834|ref|YP_007283594.1| - 1.1e-11 45.3 0.0 1.7e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637834|ref|YP_007283594.1| - 2e-08 33.9 0.0 2.6e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|433637834|ref|YP_007283594.1| - 3.3e-08 33.5 0.0 4e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|433637834|ref|YP_007283594.1| - 8.5e-05 22.5 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_9 PF08003.11 gi|433637834|ref|YP_007283594.1| - 0.0024 16.9 0.0 0.0039 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MTS PF05175.14 gi|433637834|ref|YP_007283594.1| - 0.028 14.0 0.0 0.07 12.7 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 gi|433637834|ref|YP_007283594.1| - 0.066 12.6 0.0 0.091 12.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MaoC_dehydratas PF01575.19 gi|433637835|ref|YP_007283595.1| - 0.00036 20.1 0.0 0.0018 17.8 0.0 1.9 1 1 0 1 1 1 1 MaoC like domain 4HBT PF03061.22 gi|433637835|ref|YP_007283595.1| - 0.00071 19.9 0.0 0.0014 18.9 0.0 1.6 1 1 0 1 1 1 1 Thioesterase superfamily MaoC_dehydrat_N PF13452.6 gi|433637835|ref|YP_007283595.1| - 0.0015 18.7 0.0 0.0043 17.2 0.0 1.8 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Na_H_Exchanger PF00999.21 gi|433637836|ref|YP_007283596.1| - 1.7e-50 171.9 56.7 2.5e-50 171.4 56.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Usp PF00582.26 gi|433637836|ref|YP_007283596.1| - 3.5e-29 102.1 2.1 1.4e-21 77.4 0.8 3.0 2 1 0 2 2 2 2 Universal stress protein family AMP-binding PF00501.28 gi|433637837|ref|YP_007283597.1| - 8.3e-75 252.0 0.0 1.2e-74 251.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433637837|ref|YP_007283597.1| - 9.9e-22 77.7 0.6 2.3e-21 76.6 0.6 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain CARDB PF07705.11 gi|433637838|ref|YP_007283598.1| - 1.5e-07 31.6 18.5 0.0088 16.3 2.1 5.1 5 1 0 5 5 5 4 CARDB 4HBT PF03061.22 gi|433637838|ref|YP_007283598.1| - 0.00015 22.0 7.4 4.2 7.8 0.0 5.1 5 0 0 5 5 5 3 Thioesterase superfamily DUF4981 PF16353.5 gi|433637838|ref|YP_007283598.1| - 0.004 17.6 1.2 3.4 8.2 0.1 4.0 4 0 0 4 4 4 1 Domain of unknown function(DUF4981) DUF3915 PF13054.6 gi|433637840|ref|YP_007283600.1| - 0.085 12.8 0.2 0.1 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF389 PF04087.14 gi|433637841|ref|YP_007283601.1| - 2.8e-32 111.7 15.7 2.8e-32 111.7 15.7 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF389) GSDH PF07995.11 gi|433637842|ref|YP_007283602.1| - 1.1e-29 103.9 0.3 2.1e-29 102.9 0.2 1.5 2 0 0 2 2 2 1 Glucose / Sorbosone dehydrogenase TAT_signal PF10518.9 gi|433637842|ref|YP_007283602.1| - 0.00056 19.6 1.0 0.00092 19.0 1.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence NHL PF01436.21 gi|433637842|ref|YP_007283602.1| - 0.0096 15.9 2.0 0.022 14.8 0.0 2.8 3 0 0 3 3 3 1 NHL repeat UCR_Fe-S_N PF10399.9 gi|433637842|ref|YP_007283602.1| - 0.13 11.7 0.9 0.27 10.6 0.9 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CitMHS PF03600.16 gi|433637843|ref|YP_007283603.1| - 5.4e-60 203.1 14.9 7.6e-60 202.6 14.9 1.3 1 0 0 1 1 1 1 Citrate transporter TrkA_C PF02080.21 gi|433637843|ref|YP_007283603.1| - 1.7e-19 69.4 0.6 1.3e-10 40.9 0.0 3.5 3 0 0 3 3 3 3 TrkA-C domain Na_sulph_symp PF00939.19 gi|433637843|ref|YP_007283603.1| - 9.2e-19 67.8 39.0 7.1e-09 35.2 13.3 3.2 2 1 1 3 3 3 3 Sodium:sulfate symporter transmembrane region Popeye PF04831.13 gi|433637843|ref|YP_007283603.1| - 7.7 6.7 5.4 2.3 8.4 2.0 1.9 2 0 0 2 2 2 0 Popeye protein conserved region UPF0016 PF01169.19 gi|433637844|ref|YP_007283604.1| - 1.3e-29 102.4 15.4 6.6e-16 58.4 2.5 2.2 2 0 0 2 2 2 2 Uncharacterized protein family UPF0016 TauE PF01925.19 gi|433637844|ref|YP_007283604.1| - 0.0083 15.8 9.5 0.16 11.5 0.8 2.2 2 0 0 2 2 2 2 Sulfite exporter TauE/SafE Lig_chan PF00060.26 gi|433637844|ref|YP_007283604.1| - 0.077 12.8 0.6 0.21 11.4 0.2 1.9 2 1 1 3 3 3 0 Ligand-gated ion channel 4HFCP_synth PF04476.13 gi|433637845|ref|YP_007283605.1| - 0.015 15.0 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 4-HFC-P synthase EAP30 PF04157.16 gi|433637846|ref|YP_007283606.1| - 0.024 13.9 0.1 0.03 13.6 0.1 1.1 1 0 0 1 1 1 0 EAP30/Vps36 family DprA_WH PF17782.1 gi|433637846|ref|YP_007283606.1| - 0.03 14.4 0.1 0.03 14.4 0.1 1.6 2 0 0 2 2 2 0 DprA winged helix domain HTH_15 PF12324.8 gi|433637846|ref|YP_007283606.1| - 0.079 12.9 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase SurE PF01975.17 gi|433637847|ref|YP_007283607.1| - 2.7e-47 161.1 0.6 3.6e-47 160.7 0.6 1.1 1 0 0 1 1 1 1 Survival protein SurE Methyltransf_12 PF08242.12 gi|433637848|ref|YP_007283608.1| - 2.7e-09 37.7 0.0 6.8e-09 36.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433637848|ref|YP_007283608.1| - 2.9e-08 33.7 0.0 6.3e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Rsm22 PF09243.10 gi|433637848|ref|YP_007283608.1| - 3e-05 23.4 0.0 5.2e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_11 PF08241.12 gi|433637848|ref|YP_007283608.1| - 0.00055 20.5 0.0 0.0029 18.2 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637848|ref|YP_007283608.1| - 0.00085 19.1 0.0 0.0048 16.7 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637848|ref|YP_007283608.1| - 0.00089 19.9 0.0 0.0023 18.6 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain FAD_oxidored PF12831.7 gi|433637848|ref|YP_007283608.1| - 0.048 13.0 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase PDH PF02153.17 gi|433637849|ref|YP_007283609.1| - 8.4e-12 44.6 1.3 5.2e-10 38.8 0.7 2.7 1 1 1 2 2 2 1 Prephenate dehydrogenase NAD_binding_7 PF13241.6 gi|433637849|ref|YP_007283609.1| - 0.0073 16.7 0.7 0.02 15.3 0.7 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.17 gi|433637849|ref|YP_007283609.1| - 0.0093 16.5 3.1 0.01 16.4 0.8 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|433637849|ref|YP_007283609.1| - 0.21 11.4 4.9 0.085 12.7 2.0 1.9 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAO PF01266.24 gi|433637849|ref|YP_007283609.1| - 0.5 9.9 7.2 1.3 8.5 7.0 1.8 1 1 0 1 1 1 0 FAD dependent oxidoreductase Peptidase_M24 PF00557.24 gi|433637851|ref|YP_007283611.1| - 2e-47 161.6 1.3 2.9e-47 161.1 1.3 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|433637851|ref|YP_007283611.1| - 4.8e-06 27.2 0.0 8.3e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain EPSP_synthase PF00275.20 gi|433637852|ref|YP_007283612.1| - 8.2e-103 344.3 0.0 1.7e-102 343.3 0.0 1.4 1 1 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HTH_47 PF16221.5 gi|433637852|ref|YP_007283612.1| - 0.029 13.9 0.4 3.6 7.2 0.0 3.1 3 0 0 3 3 3 0 winged helix-turn-helix BA14K PF07886.11 gi|433637852|ref|YP_007283612.1| - 0.23 11.4 0.1 0.45 10.4 0.1 1.5 1 0 0 1 1 1 0 BA14K-like protein Phosphodiest PF01663.22 gi|433637853|ref|YP_007283613.1| - 6.2e-23 82.0 0.1 2.2e-22 80.2 0.1 1.7 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|433637853|ref|YP_007283613.1| - 1.5e-05 25.2 0.0 0.087 12.9 0.0 2.2 2 0 0 2 2 2 2 PglZ domain Sulfatase PF00884.23 gi|433637853|ref|YP_007283613.1| - 0.16 11.3 0.0 4.2 6.7 0.0 2.1 2 0 0 2 2 2 0 Sulfatase Glycos_transf_2 PF00535.26 gi|433637855|ref|YP_007283615.1| - 1.2e-17 64.2 0.1 1.8e-17 63.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433637855|ref|YP_007283615.1| - 3.8e-08 33.5 0.0 5.7e-08 32.9 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|433637855|ref|YP_007283615.1| - 0.00072 20.0 0.0 0.0016 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 SfLAP PF11139.8 gi|433637855|ref|YP_007283615.1| - 0.0095 15.4 2.1 0.014 14.9 2.1 1.1 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein CoA_binding_2 PF13380.6 gi|433637855|ref|YP_007283615.1| - 0.071 13.6 0.0 0.19 12.2 0.0 1.7 1 0 0 1 1 1 0 CoA binding domain Tugs PF17840.1 gi|433637855|ref|YP_007283615.1| - 0.12 12.5 0.6 19 5.6 0.6 2.4 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain Trp_oprn_chp PF09534.10 gi|433637855|ref|YP_007283615.1| - 0.34 10.7 2.4 0.57 9.9 2.4 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) RHH_1 PF01402.21 gi|433637857|ref|YP_007283617.1| - 5.9e-05 22.9 0.2 0.00015 21.5 0.0 1.7 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family PALP PF00291.25 gi|433637859|ref|YP_007283619.1| - 1.7e-61 208.2 1.0 1.9e-61 208.0 1.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF745 PF05335.13 gi|433637860|ref|YP_007283620.1| - 0.00025 20.8 2.2 0.00029 20.6 2.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF745) T4SS PF07996.11 gi|433637860|ref|YP_007283620.1| - 0.0011 19.4 3.4 0.002 18.5 3.4 1.5 1 1 0 1 1 1 1 Type IV secretion system proteins DUF1664 PF07889.12 gi|433637860|ref|YP_007283620.1| - 0.0052 16.8 1.1 0.0068 16.4 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Lge1 PF11488.8 gi|433637860|ref|YP_007283620.1| - 0.006 16.7 0.2 0.011 15.9 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein LGE1 BLOC1_2 PF10046.9 gi|433637860|ref|YP_007283620.1| - 0.01 16.1 1.8 0.013 15.8 1.8 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Ham1p_like PF01725.16 gi|433637860|ref|YP_007283620.1| - 0.011 15.7 1.4 0.012 15.6 1.4 1.2 1 0 0 1 1 1 0 Ham1 family DUF1465 PF07323.12 gi|433637860|ref|YP_007283620.1| - 0.013 15.3 0.5 0.022 14.6 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Laminin_II PF06009.12 gi|433637860|ref|YP_007283620.1| - 0.025 14.6 1.3 0.033 14.2 1.3 1.2 1 0 0 1 1 1 0 Laminin Domain II TRPM_tetra PF16519.5 gi|433637860|ref|YP_007283620.1| - 0.03 14.4 0.3 0.044 13.9 0.3 1.4 1 0 0 1 1 1 0 Tetramerisation domain of TRPM GldM_N PF12081.8 gi|433637860|ref|YP_007283620.1| - 0.036 14.2 1.8 0.038 14.1 1.2 1.3 1 1 0 1 1 1 0 GldM N-terminal domain Hemagglutinin PF00509.18 gi|433637860|ref|YP_007283620.1| - 0.038 12.4 0.4 0.046 12.1 0.4 1.0 1 0 0 1 1 1 0 Haemagglutinin ADIP PF11559.8 gi|433637860|ref|YP_007283620.1| - 0.041 14.0 0.9 0.053 13.6 0.9 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding CLZ PF16526.5 gi|433637860|ref|YP_007283620.1| - 0.044 14.1 0.6 0.099 13.0 0.6 1.7 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SlyX PF04102.12 gi|433637860|ref|YP_007283620.1| - 0.047 14.3 2.6 0.047 14.3 2.6 2.0 1 1 1 2 2 2 0 SlyX Tropomyosin_1 PF12718.7 gi|433637860|ref|YP_007283620.1| - 0.056 13.6 4.9 0.045 13.9 3.4 1.6 1 1 0 1 1 1 0 Tropomyosin like GAT PF03127.14 gi|433637860|ref|YP_007283620.1| - 0.058 13.7 0.6 0.11 12.8 0.6 1.6 1 0 0 1 1 1 0 GAT domain CDC37_C PF08564.10 gi|433637860|ref|YP_007283620.1| - 0.06 13.5 3.6 0.079 13.1 3.6 1.2 1 0 0 1 1 1 0 Cdc37 C terminal domain XhlA PF10779.9 gi|433637860|ref|YP_007283620.1| - 0.066 13.4 3.1 0.11 12.7 0.9 2.0 1 1 1 2 2 2 0 Haemolysin XhlA DUF948 PF06103.11 gi|433637860|ref|YP_007283620.1| - 0.066 13.5 1.0 0.11 12.7 1.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 gi|433637860|ref|YP_007283620.1| - 0.096 13.2 2.1 0.14 12.6 2.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DSBA PF01323.20 gi|433637860|ref|YP_007283620.1| - 0.11 12.3 1.6 0.15 11.8 1.6 1.3 1 0 0 1 1 1 0 DSBA-like thioredoxin domain LPP PF04728.13 gi|433637860|ref|YP_007283620.1| - 0.13 12.6 2.8 0.48 10.8 2.8 2.1 1 1 0 1 1 1 0 Lipoprotein leucine-zipper DivIC PF04977.15 gi|433637860|ref|YP_007283620.1| - 0.14 12.0 4.3 0.15 11.9 2.0 1.8 1 1 1 2 2 2 0 Septum formation initiator DUF2730 PF10805.8 gi|433637860|ref|YP_007283620.1| - 0.22 11.6 1.5 0.28 11.3 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) CRS1_YhbY PF01985.21 gi|433637862|ref|YP_007283622.1| - 1.7e-11 44.1 0.0 1.9e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Rpr2 PF04032.16 gi|433637863|ref|YP_007283623.1| - 2e-11 44.0 0.0 2.4e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain Tnp_zf-ribbon_2 PF13842.6 gi|433637863|ref|YP_007283623.1| - 0.0061 17.3 0.1 0.011 16.5 0.1 1.4 1 0 0 1 1 1 1 DDE_Tnp_1-like zinc-ribbon Prok-RING_2 PF14445.6 gi|433637863|ref|YP_007283623.1| - 0.11 12.7 1.0 0.12 12.6 0.7 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 2 SBP_bac_5 PF00496.22 gi|433637864|ref|YP_007283624.1| - 2.1e-40 138.9 0.0 5.5e-37 127.6 0.0 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle MIT_C PF16565.5 gi|433637864|ref|YP_007283624.1| - 0.14 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT RHH_1 PF01402.21 gi|433637864|ref|YP_007283624.1| - 0.15 12.0 0.1 0.45 10.5 0.1 1.9 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family PAP2_3 PF14378.6 gi|433637865|ref|YP_007283625.1| - 6.4e-17 61.9 13.6 6.4e-17 61.9 13.6 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2 PF01569.21 gi|433637865|ref|YP_007283625.1| - 2.9e-12 46.5 6.9 2.9e-12 46.5 6.9 2.3 2 1 1 3 3 3 1 PAP2 superfamily DUF4870 PF09685.10 gi|433637865|ref|YP_007283625.1| - 0.21 11.7 11.1 0.046 13.8 4.7 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4870) SBP_bac_5 PF00496.22 gi|433637866|ref|YP_007283626.1| - 1.4e-39 136.1 0.0 2.2e-36 125.6 0.4 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle baeRF_family2 PF18844.1 gi|433637867|ref|YP_007283627.1| - 0.22 11.6 6.4 2.6 8.1 0.2 2.1 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 DUF2797 PF10977.8 gi|433637868|ref|YP_007283628.1| - 5.9e-30 104.9 4.8 3.9e-26 92.4 1.2 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2797) BsuPI PF12690.7 gi|433637869|ref|YP_007283629.1| - 1.4e-33 114.9 0.0 1.6e-33 114.7 0.0 1.0 1 0 0 1 1 1 1 Intracellular proteinase inhibitor Big_4 PF07532.11 gi|433637869|ref|YP_007283629.1| - 0.0015 18.2 1.2 0.16 11.7 0.1 3.0 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 4) Monooxygenase_B PF04744.12 gi|433637869|ref|YP_007283629.1| - 0.0025 16.7 0.0 0.0031 16.4 0.0 1.0 1 0 0 1 1 1 1 Monooxygenase subunit B protein DUF4232 PF14016.6 gi|433637869|ref|YP_007283629.1| - 0.01 16.0 0.5 0.028 14.5 0.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4232) CARDB PF07705.11 gi|433637869|ref|YP_007283629.1| - 0.014 15.6 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 CARDB Big_3_5 PF16640.5 gi|433637869|ref|YP_007283629.1| - 0.047 13.9 0.4 0.14 12.3 0.2 1.8 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) He_PIG PF05345.12 gi|433637869|ref|YP_007283629.1| - 0.065 13.4 0.8 0.31 11.2 0.1 2.2 2 0 0 2 2 2 0 Putative Ig domain fn3_5 PF06280.12 gi|433637869|ref|YP_007283629.1| - 0.1 13.3 0.0 0.14 12.8 0.0 1.4 1 1 0 1 1 1 0 Fn3-like domain DUF11 PF01345.18 gi|433637869|ref|YP_007283629.1| - 0.11 12.8 0.5 0.37 11.1 0.4 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF11 Phage_holin_3_6 PF07332.11 gi|433637870|ref|YP_007283630.1| - 0.0011 19.0 1.4 0.0013 18.8 1.4 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III SSF PF00474.17 gi|433637871|ref|YP_007283631.1| - 1.6e-46 159.0 32.3 2.4e-46 158.4 32.3 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family Rhodanese PF00581.20 gi|433637872|ref|YP_007283632.1| - 1.2e-32 112.6 0.1 2.6e-18 66.5 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain TetR_C_6 PF13977.6 gi|433637873|ref|YP_007283633.1| - 2.9e-14 53.3 2.0 7.3e-14 52.0 2.0 1.7 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 gi|433637873|ref|YP_007283633.1| - 1.1e-07 31.5 0.2 2.7e-07 30.3 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|433637873|ref|YP_007283633.1| - 2.7e-07 30.8 0.0 6.3e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_31 PF17940.1 gi|433637873|ref|YP_007283633.1| - 0.008 16.4 1.9 0.021 15.0 1.9 1.7 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_27 PF17935.1 gi|433637873|ref|YP_007283633.1| - 0.015 15.3 0.1 0.044 13.8 0.1 1.9 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain MatE PF01554.18 gi|433637874|ref|YP_007283634.1| - 5.2e-59 198.5 33.4 2.5e-32 111.7 10.2 2.7 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|433637874|ref|YP_007283634.1| - 0.00023 21.2 0.9 0.00023 21.2 0.9 5.5 4 2 0 5 5 5 3 Polysaccharide biosynthesis C-terminal domain Phage_Coat_Gp8 PF05371.12 gi|433637874|ref|YP_007283634.1| - 0.12 12.1 2.1 12 5.7 0.1 2.9 2 0 0 2 2 2 0 Phage major coat protein, Gp8 MFS_1 PF07690.16 gi|433637875|ref|YP_007283635.1| - 3.6e-24 85.3 52.7 2.2e-16 59.7 25.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily zf-C2HC5 PF06221.13 gi|433637876|ref|YP_007283636.1| - 0.00075 19.4 0.2 0.00088 19.2 0.2 1.1 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type zf-C2H2_3 PF13878.6 gi|433637876|ref|YP_007283636.1| - 0.014 15.2 0.1 0.014 15.2 0.1 1.9 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Methyltransf_13 PF08421.11 gi|433637876|ref|YP_007283636.1| - 0.016 15.4 0.3 0.94 9.8 0.0 2.1 2 0 0 2 2 2 0 Putative zinc binding domain C1_1 PF00130.22 gi|433637876|ref|YP_007283636.1| - 0.084 12.8 1.4 4.7 7.2 0.1 2.0 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Acetyltransf_10 PF13673.7 gi|433637877|ref|YP_007283637.1| - 2.4e-09 37.2 0.0 3.6e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433637877|ref|YP_007283637.1| - 4.9e-07 30.0 0.0 9.6e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433637877|ref|YP_007283637.1| - 2.8e-06 27.6 0.0 4.9e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433637877|ref|YP_007283637.1| - 0.0016 18.5 0.0 0.01 15.9 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain AA_permease_2 PF13520.6 gi|433637878|ref|YP_007283638.1| - 4.5e-26 91.6 39.8 5.5e-26 91.4 39.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|433637878|ref|YP_007283638.1| - 6.5e-15 54.7 38.9 9.8e-15 54.1 38.9 1.4 1 1 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|433637878|ref|YP_007283638.1| - 0.0042 16.0 0.5 0.011 14.6 0.5 1.6 1 0 0 1 1 1 1 Spore germination protein 3HCDH_N PF02737.18 gi|433637879|ref|YP_007283639.1| - 3.6e-45 154.1 0.0 5.2e-45 153.5 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|433637879|ref|YP_007283639.1| - 7.4e-23 81.0 0.4 3.5e-14 53.2 0.0 2.9 3 1 1 4 4 4 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|433637879|ref|YP_007283639.1| - 9.5e-06 25.9 0.0 6.8e-05 23.1 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|433637879|ref|YP_007283639.1| - 0.00047 19.5 0.0 0.00088 18.6 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|433637879|ref|YP_007283639.1| - 0.00063 19.4 0.3 0.01 15.4 0.1 2.2 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_8 PF13450.6 gi|433637879|ref|YP_007283639.1| - 0.0017 18.5 0.1 0.0041 17.3 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 gi|433637879|ref|YP_007283639.1| - 0.0026 17.4 0.0 0.0099 15.5 0.0 1.9 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 gi|433637879|ref|YP_007283639.1| - 0.0039 17.7 0.1 0.0096 16.5 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|433637879|ref|YP_007283639.1| - 0.0049 16.9 0.0 0.0077 16.2 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XdhC_C PF13478.6 gi|433637879|ref|YP_007283639.1| - 0.0062 17.0 1.7 0.014 15.9 0.1 2.2 2 0 0 2 2 2 1 XdhC Rossmann domain 2-Hacid_dh_C PF02826.19 gi|433637879|ref|YP_007283639.1| - 0.0097 15.3 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CbiA PF01656.23 gi|433637879|ref|YP_007283639.1| - 0.016 15.3 0.0 0.033 14.3 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AlaDh_PNT_C PF01262.21 gi|433637879|ref|YP_007283639.1| - 0.016 14.5 0.1 0.03 13.6 0.1 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|433637879|ref|YP_007283639.1| - 0.02 15.1 0.0 0.047 13.9 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain FAD_binding_3 PF01494.19 gi|433637879|ref|YP_007283639.1| - 0.025 13.8 0.1 0.066 12.5 0.1 1.6 2 0 0 2 2 2 0 FAD binding domain DAO PF01266.24 gi|433637879|ref|YP_007283639.1| - 0.027 14.1 3.5 0.029 13.9 3.5 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|433637879|ref|YP_007283639.1| - 0.046 14.3 0.0 0.15 12.7 0.0 1.9 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TMEM18 PF14770.6 gi|433637880|ref|YP_007283640.1| - 0.026 14.5 0.2 0.044 13.8 0.1 1.5 2 0 0 2 2 2 0 Transmembrane protein 18 TPP_enzyme_N PF02776.18 gi|433637881|ref|YP_007283641.1| - 1.2e-45 155.3 5.0 8.2e-43 146.0 0.2 2.9 3 0 0 3 3 3 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433637881|ref|YP_007283641.1| - 2.4e-38 130.9 0.1 4.4e-38 130.1 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|433637881|ref|YP_007283641.1| - 4.8e-29 101.1 0.0 1.5e-28 99.5 0.0 1.9 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Peptidase_S9 PF00326.21 gi|433637882|ref|YP_007283642.1| - 1.7e-43 148.5 0.0 2.8e-43 147.9 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|433637882|ref|YP_007283642.1| - 1.9e-12 47.2 0.0 3.4e-12 46.4 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|433637882|ref|YP_007283642.1| - 3.6e-12 46.4 0.0 3.9e-09 36.5 0.0 2.3 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|433637882|ref|YP_007283642.1| - 1.2e-09 37.8 0.1 1.9e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 PD40 PF07676.12 gi|433637882|ref|YP_007283642.1| - 2.6e-09 36.8 7.5 0.064 13.2 0.1 5.6 5 0 0 5 5 5 2 WD40-like Beta Propeller Repeat Abhydrolase_1 PF00561.20 gi|433637882|ref|YP_007283642.1| - 6.2e-08 32.6 0.1 0.0045 16.7 0.1 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold DPPIV_N PF00930.21 gi|433637882|ref|YP_007283642.1| - 5.3e-06 25.4 0.0 0.0018 17.1 0.0 2.4 2 0 0 2 2 2 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region BAAT_C PF08840.11 gi|433637882|ref|YP_007283642.1| - 2.6e-05 24.3 0.0 0.017 15.0 0.0 3.2 2 1 1 3 3 3 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_2 PF02230.16 gi|433637882|ref|YP_007283642.1| - 0.00013 21.8 0.0 0.44 10.3 0.0 2.2 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase AXE1 PF05448.12 gi|433637882|ref|YP_007283642.1| - 0.00049 18.9 0.0 0.029 13.0 0.0 2.2 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Esterase PF00756.20 gi|433637882|ref|YP_007283642.1| - 0.0009 19.0 0.0 0.06 13.0 0.0 2.5 2 0 0 2 2 2 1 Putative esterase Abhydrolase_3 PF07859.13 gi|433637882|ref|YP_007283642.1| - 0.0028 17.6 0.0 0.044 13.6 0.0 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9_N PF02897.15 gi|433637882|ref|YP_007283642.1| - 0.049 12.4 0.0 0.73 8.6 0.0 2.2 2 0 0 2 2 2 0 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S28 PF05577.12 gi|433637882|ref|YP_007283642.1| - 0.12 11.2 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 PQQ PF01011.21 gi|433637882|ref|YP_007283642.1| - 0.14 12.2 1.0 49 4.1 0.0 3.9 4 0 0 4 4 4 0 PQQ enzyme repeat DUF2267 PF10025.9 gi|433637884|ref|YP_007283644.1| - 9.1e-32 109.9 0.4 1.9e-31 108.9 0.1 1.5 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2267) CBS PF00571.28 gi|433637885|ref|YP_007283645.1| - 2e-36 124.2 13.4 1.5e-10 41.4 0.3 4.5 4 0 0 4 4 4 4 CBS domain Ribosomal_S30AE PF02482.19 gi|433637885|ref|YP_007283645.1| - 0.006 17.3 0.1 0.042 14.6 0.0 2.2 2 0 0 2 2 2 1 Sigma 54 modulation protein / S30EA ribosomal protein VAPB_antitox PF02697.14 gi|433637886|ref|YP_007283646.1| - 0.00065 20.4 0.2 0.00069 20.3 0.2 1.1 1 0 0 1 1 1 1 Putative antitoxin Flavodoxin_5 PF12724.7 gi|433637887|ref|YP_007283647.1| - 1.1e-26 93.8 0.0 2.1e-26 92.9 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|433637887|ref|YP_007283647.1| - 1.8e-05 25.0 0.2 0.00046 20.4 0.0 2.2 2 0 0 2 2 2 1 Flavodoxin FMN_red PF03358.15 gi|433637887|ref|YP_007283647.1| - 0.0085 15.8 0.1 0.67 9.7 0.0 2.4 1 1 1 2 2 2 1 NADPH-dependent FMN reductase Flavodoxin_3 PF12641.7 gi|433637887|ref|YP_007283647.1| - 0.012 15.3 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain HTH_15 PF12324.8 gi|433637887|ref|YP_007283647.1| - 0.062 13.3 0.1 10 6.2 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase Gram_pos_anchor PF00746.21 gi|433637887|ref|YP_007283647.1| - 0.34 10.9 1.0 0.73 9.8 1.0 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Usp PF00582.26 gi|433637888|ref|YP_007283648.1| - 2.6e-05 24.8 0.2 5.2e-05 23.8 0.2 1.5 1 1 0 1 1 1 1 Universal stress protein family PGBA_N PF15436.6 gi|433637888|ref|YP_007283648.1| - 0.13 11.9 0.0 4.5 6.8 0.0 2.2 1 1 0 1 1 1 0 Plasminogen-binding protein pgbA N-terminal PBP PF01161.20 gi|433637890|ref|YP_007283650.1| - 8.7e-34 116.7 0.1 1.1e-33 116.4 0.1 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein VapB_antitoxin PF09957.9 gi|433637891|ref|YP_007283651.1| - 0.0037 17.1 1.8 0.0075 16.2 1.8 1.6 1 1 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB RhodobacterPufX PF11511.8 gi|433637892|ref|YP_007283652.1| - 2.5 7.8 5.8 0.22 11.2 0.6 1.8 2 0 0 2 2 2 0 Intrinsic membrane protein PufX DUF4758 PF15950.5 gi|433637893|ref|YP_007283653.1| - 0.56 10.5 2.6 0.91 9.9 2.6 1.3 1 0 0 1 1 1 0 Putative sperm flagellar membrane protein DpnII-MboI PF18742.1 gi|433637896|ref|YP_007283656.1| - 3.2e-38 130.7 0.5 5.4e-38 130.0 0.5 1.4 1 0 0 1 1 1 1 REase_DpnII-MboI PBECR2 PF18810.1 gi|433637897|ref|YP_007283657.1| - 0.01 16.1 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 DUF3563 PF12086.8 gi|433637898|ref|YP_007283658.1| - 0.039 13.7 0.1 0.084 12.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3563) Abhydrolase_6 PF12697.7 gi|433637899|ref|YP_007283659.1| - 1.3e-06 29.2 7.0 0.00083 20.0 2.3 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|433637899|ref|YP_007283659.1| - 1.8e-05 24.5 0.0 0.0001 22.0 0.0 1.8 1 1 1 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 gi|433637899|ref|YP_007283659.1| - 2e-05 24.3 0.0 2.3e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|433637899|ref|YP_007283659.1| - 2.7e-05 23.6 0.0 0.08 12.2 0.1 2.6 1 1 1 2 2 2 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|433637899|ref|YP_007283659.1| - 0.0024 17.8 0.0 0.33 10.8 0.0 2.1 1 1 1 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|433637899|ref|YP_007283659.1| - 0.072 12.6 0.5 1.7 8.1 0.0 2.2 1 1 1 2 2 2 0 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|433637899|ref|YP_007283659.1| - 0.078 12.6 0.1 0.68 9.5 0.1 1.9 1 1 1 2 2 2 0 X-Pro dipeptidyl-peptidase (S15 family) Acetyltransf_10 PF13673.7 gi|433637899|ref|YP_007283659.1| - 0.19 11.6 0.0 3.8 7.5 0.0 2.1 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain TauE PF01925.19 gi|433637900|ref|YP_007283660.1| - 7e-17 61.8 28.3 7e-17 61.8 28.3 2.0 1 1 1 2 2 2 1 Sulfite exporter TauE/SafE K_channel_TID PF07941.11 gi|433637900|ref|YP_007283660.1| - 0.13 12.8 0.3 0.4 11.2 0.3 1.8 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain DUF308 PF03729.13 gi|433637901|ref|YP_007283661.1| - 2.8e-15 56.4 38.5 1.6e-06 28.3 12.3 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) Neurensin PF14927.6 gi|433637901|ref|YP_007283661.1| - 0.43 10.3 0.0 0.43 10.3 0.0 2.9 2 1 1 3 3 3 0 Neurensin Thiolase_N PF00108.23 gi|433637902|ref|YP_007283662.1| - 1.7e-56 191.5 0.0 2.1e-56 191.2 0.0 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|433637902|ref|YP_007283662.1| - 8.1e-40 135.3 0.0 1.4e-39 134.6 0.0 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|433637902|ref|YP_007283662.1| - 0.00012 21.8 0.4 0.00033 20.3 0.1 1.9 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain DICT PF10069.9 gi|433637904|ref|YP_007283664.1| - 0.00019 21.2 0.0 0.00039 20.2 0.0 1.6 1 1 0 1 1 1 1 Sensory domain in DIguanylate Cyclases and Two-component system SOUL PF04832.12 gi|433637905|ref|YP_007283665.1| - 1.3e-36 126.3 1.2 6.5e-35 120.8 1.2 2.0 1 1 0 1 1 1 1 SOUL heme-binding protein CENP-O PF09496.10 gi|433637906|ref|YP_007283666.1| - 0.004 17.2 0.0 0.0045 17.0 0.0 1.1 1 0 0 1 1 1 1 Cenp-O kinetochore centromere component TAT_signal PF10518.9 gi|433637906|ref|YP_007283666.1| - 0.0096 15.7 2.3 0.0096 15.7 2.3 1.8 1 1 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence DUF1059 PF06348.11 gi|433637907|ref|YP_007283667.1| - 4.4e-09 36.4 1.1 5.2e-09 36.2 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) CMD PF02627.20 gi|433637908|ref|YP_007283668.1| - 2.8e-11 43.3 0.1 6.6e-11 42.1 0.0 1.6 2 0 0 2 2 2 1 Carboxymuconolactone decarboxylase family SPW PF03779.14 gi|433637910|ref|YP_007283670.1| - 2e-10 40.1 16.5 2.7e-05 23.7 5.7 2.3 2 0 0 2 2 2 2 SPW repeat Bax1-I PF01027.20 gi|433637910|ref|YP_007283670.1| - 0.086 12.7 6.1 0.1 12.4 6.1 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 OppC_N PF12911.7 gi|433637910|ref|YP_007283670.1| - 0.26 11.3 3.6 0.33 11.0 0.1 2.3 1 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C PrgI PF12666.7 gi|433637910|ref|YP_007283670.1| - 4.8 8.0 5.3 4 8.2 0.3 2.0 1 1 1 2 2 2 0 PrgI family protein DUF202 PF02656.15 gi|433637910|ref|YP_007283670.1| - 9.4 6.8 10.5 66 4.0 7.1 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF202) FecCD PF01032.18 gi|433637912|ref|YP_007283672.1| - 2.8e-85 286.1 33.4 2.8e-85 286.1 33.4 1.3 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|433637912|ref|YP_007283672.1| - 0.081 12.4 21.3 0.0053 16.3 15.3 2.1 2 1 0 2 2 2 0 ABC 3 transport family ABC_tran PF00005.27 gi|433637913|ref|YP_007283673.1| - 1.6e-28 99.9 0.0 2.1e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637913|ref|YP_007283673.1| - 1.9e-15 57.5 1.4 1.3e-06 28.5 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433637913|ref|YP_007283673.1| - 9.1e-12 44.9 0.4 2.1e-09 37.1 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 gi|433637913|ref|YP_007283673.1| - 1.3e-06 27.5 0.1 0.0046 15.8 0.0 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 gi|433637913|ref|YP_007283673.1| - 2.9e-06 26.9 0.0 6.3e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433637913|ref|YP_007283673.1| - 5.8e-05 23.4 0.5 0.00039 20.7 0.5 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|433637913|ref|YP_007283673.1| - 6.6e-05 23.5 0.0 8.3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|433637913|ref|YP_007283673.1| - 0.00012 22.0 0.0 0.0004 20.2 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 gi|433637913|ref|YP_007283673.1| - 0.00038 20.1 0.2 0.0034 17.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 gi|433637913|ref|YP_007283673.1| - 0.00089 18.7 0.2 0.59 9.5 0.0 2.1 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|433637913|ref|YP_007283673.1| - 0.0011 19.1 0.0 0.0039 17.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|433637913|ref|YP_007283673.1| - 0.0012 18.6 0.1 0.063 13.1 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 gi|433637913|ref|YP_007283673.1| - 0.0017 18.9 0.0 0.0062 17.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433637913|ref|YP_007283673.1| - 0.0027 17.5 0.3 0.0062 16.3 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433637913|ref|YP_007283673.1| - 0.0027 18.1 0.3 0.0044 17.4 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433637913|ref|YP_007283673.1| - 0.0047 16.8 0.0 0.0089 15.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase HD PF01966.22 gi|433637913|ref|YP_007283673.1| - 0.0057 16.9 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 HD domain AAA_28 PF13521.6 gi|433637913|ref|YP_007283673.1| - 0.006 16.8 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433637913|ref|YP_007283673.1| - 0.029 14.8 0.0 0.086 13.3 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 gi|433637913|ref|YP_007283673.1| - 0.031 13.6 0.0 0.056 12.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_5 PF07728.14 gi|433637913|ref|YP_007283673.1| - 0.038 14.0 0.1 0.11 12.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|433637913|ref|YP_007283673.1| - 0.039 13.5 0.4 0.28 10.8 0.1 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|433637913|ref|YP_007283673.1| - 0.046 13.8 0.1 0.21 11.7 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_27 PF13514.6 gi|433637913|ref|YP_007283673.1| - 0.057 13.0 0.0 0.098 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|433637913|ref|YP_007283673.1| - 0.06 13.3 0.1 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 NACHT domain MukB PF04310.12 gi|433637913|ref|YP_007283673.1| - 0.089 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 MukB N-terminal AAA_14 PF13173.6 gi|433637913|ref|YP_007283673.1| - 0.11 12.5 0.0 0.37 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF2813 PF11398.8 gi|433637913|ref|YP_007283673.1| - 0.13 11.4 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) SRP54 PF00448.22 gi|433637913|ref|YP_007283673.1| - 0.17 11.5 0.1 0.4 10.3 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 gi|433637913|ref|YP_007283673.1| - 0.18 12.2 0.0 0.32 11.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase TniB PF05621.11 gi|433637913|ref|YP_007283673.1| - 0.19 11.1 0.0 2.7 7.4 0.1 2.0 2 0 0 2 2 2 0 Bacterial TniB protein Peripla_BP_2 PF01497.18 gi|433637914|ref|YP_007283674.1| - 2.7e-18 66.4 0.0 3.6e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.9 gi|433637914|ref|YP_007283674.1| - 0.00035 20.3 3.0 0.00058 19.6 3.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence DUF2238 PF09997.9 gi|433637915|ref|YP_007283675.1| - 0.00065 19.5 3.1 0.00087 19.1 0.5 2.1 1 1 1 2 2 2 1 Predicted membrane protein (DUF2238) PsbN PF02468.15 gi|433637915|ref|YP_007283675.1| - 0.078 12.8 0.4 0.078 12.8 0.4 3.4 5 0 0 5 5 5 0 Photosystem II reaction centre N protein (psbN) RhodobacterPufX PF11511.8 gi|433637916|ref|YP_007283676.1| - 6.4 6.5 15.8 0.64 9.7 0.3 3.5 2 1 0 3 3 3 0 Intrinsic membrane protein PufX DUF2070 PF09843.9 gi|433637916|ref|YP_007283676.1| - 7.6 4.7 14.2 11 4.2 14.2 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HNH_5 PF14279.6 gi|433637917|ref|YP_007283677.1| - 5.7e-08 32.5 0.0 8.2e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 gi|433637917|ref|YP_007283677.1| - 1.8e-07 31.2 0.1 2.9e-07 30.5 0.1 1.2 1 0 0 1 1 1 1 HNH endonuclease FpoO PF10621.9 gi|433637917|ref|YP_007283677.1| - 0.073 13.4 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO Pirin PF02678.16 gi|433637918|ref|YP_007283678.1| - 4.2e-21 75.0 0.0 8.8e-21 73.9 0.0 1.6 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 gi|433637918|ref|YP_007283678.1| - 1.7e-09 37.9 0.1 6e-07 29.8 0.0 3.3 3 1 0 3 3 3 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 gi|433637918|ref|YP_007283678.1| - 0.0026 17.4 3.0 0.0052 16.5 0.2 2.6 2 1 0 2 2 2 1 Cupin domain Pirin_C_2 PF17954.1 gi|433637918|ref|YP_007283678.1| - 0.21 11.8 0.0 0.53 10.5 0.0 1.6 2 0 0 2 2 2 0 Quercetinase C-terminal cupin domain Usp PF00582.26 gi|433637920|ref|YP_007283680.1| - 1.5e-57 194.1 10.9 8.8e-30 104.1 1.1 2.1 2 0 0 2 2 2 2 Universal stress protein family DNA_photolyase PF00875.18 gi|433637920|ref|YP_007283680.1| - 0.0033 17.5 0.1 0.021 14.9 0.1 1.9 2 0 0 2 2 2 1 DNA photolyase UbiA PF01040.18 gi|433637922|ref|YP_007283682.1| - 9.4e-49 166.0 23.7 1.2e-48 165.6 23.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF835 PF05763.12 gi|433637923|ref|YP_007283683.1| - 2e-05 24.3 0.0 2.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF835) PAXNEB PF05625.11 gi|433637923|ref|YP_007283683.1| - 0.0002 20.6 0.0 0.00023 20.4 0.0 1.1 1 0 0 1 1 1 1 PAXNEB protein ATPase PF06745.13 gi|433637923|ref|YP_007283683.1| - 0.0004 19.8 0.0 0.00099 18.5 0.0 1.6 1 1 0 1 1 1 1 KaiC DUF829 PF05705.14 gi|433637923|ref|YP_007283683.1| - 0.017 15.0 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF829) DUF1477 PF07346.11 gi|433637923|ref|YP_007283683.1| - 0.11 12.7 0.2 0.2 11.9 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1477) IstB_IS21 PF01695.17 gi|433637923|ref|YP_007283683.1| - 0.15 11.8 0.0 1.3 8.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein CoA_binding_2 PF13380.6 gi|433637924|ref|YP_007283684.1| - 1.2e-38 132.2 0.2 1.4e-38 132.0 0.2 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|433637924|ref|YP_007283684.1| - 7.9e-05 23.3 0.0 0.00012 22.7 0.0 1.2 1 0 0 1 1 1 1 CoA binding domain TusA PF01206.17 gi|433637924|ref|YP_007283684.1| - 0.056 13.3 0.0 0.089 12.6 0.0 1.3 1 0 0 1 1 1 0 Sulfurtransferase TusA CbiG_mid PF11761.8 gi|433637925|ref|YP_007283685.1| - 0.018 15.2 0.1 0.4 10.8 0.0 2.3 1 1 1 2 2 2 0 Cobalamin biosynthesis central region ThiC_Rad_SAM PF01964.18 gi|433637926|ref|YP_007283686.1| - 3.5e-190 632.2 0.0 4.1e-190 632.0 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Sigma70_r3 PF04539.16 gi|433637926|ref|YP_007283686.1| - 0.14 12.3 0.3 0.14 12.3 0.3 2.7 2 1 1 3 3 3 0 Sigma-70 region 3 Nudix_N_2 PF14803.6 gi|433637926|ref|YP_007283686.1| - 0.8 9.7 3.7 3.7 7.5 0.4 2.6 2 0 0 2 2 2 0 Nudix N-terminal PhzC-PhzF PF02567.16 gi|433637927|ref|YP_007283687.1| - 2.8e-61 207.5 0.4 1.5e-59 201.8 0.4 2.0 1 1 0 1 1 1 1 Phenazine biosynthesis-like protein Pro_racemase PF05544.11 gi|433637927|ref|YP_007283687.1| - 4.6e-05 22.6 0.0 7.7e-05 21.9 0.0 1.3 1 0 0 1 1 1 1 Proline racemase HypA PF01155.19 gi|433637928|ref|YP_007283688.1| - 0.11 12.5 1.0 0.19 11.7 0.6 1.6 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 gi|433637928|ref|YP_007283688.1| - 0.12 12.3 1.5 9.2 6.3 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS91 PF14319.6 gi|433637928|ref|YP_007283688.1| - 0.14 12.2 0.3 0.34 11.0 0.2 1.8 2 0 0 2 2 2 0 Transposase zinc-binding domain zf-CSL PF05207.13 gi|433637928|ref|YP_007283688.1| - 2.3 8.0 7.4 8.7 6.2 1.7 2.5 1 1 1 2 2 2 0 CSL zinc finger ABC_tran PF00005.27 gi|433637929|ref|YP_007283689.1| - 4.3e-23 82.4 0.0 6e-23 81.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433637929|ref|YP_007283689.1| - 9.7e-09 35.4 0.0 4.2e-05 23.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|433637929|ref|YP_007283689.1| - 0.0023 18.6 0.0 0.006 17.3 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|433637929|ref|YP_007283689.1| - 0.0047 16.7 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|433637929|ref|YP_007283689.1| - 0.017 15.6 0.2 0.026 15.0 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|433637929|ref|YP_007283689.1| - 0.028 14.2 0.1 0.066 13.0 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|433637929|ref|YP_007283689.1| - 0.037 13.9 0.0 0.066 13.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 gi|433637929|ref|YP_007283689.1| - 0.052 13.8 0.0 0.18 12.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|433637929|ref|YP_007283689.1| - 0.058 13.0 0.0 0.15 11.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 gi|433637929|ref|YP_007283689.1| - 0.12 11.9 0.5 19 4.7 0.0 2.8 3 0 0 3 3 3 0 Elongation factor Tu GTP binding domain ABC2_membrane_2 PF12679.7 gi|433637930|ref|YP_007283690.1| - 7.8e-39 133.7 11.4 4.8e-37 127.8 11.4 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433637930|ref|YP_007283690.1| - 3.1e-07 30.5 4.1 3.1e-07 30.5 4.1 2.3 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433637930|ref|YP_007283690.1| - 1.9e-06 27.2 13.0 1.9e-06 27.2 13.0 1.5 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433637930|ref|YP_007283690.1| - 0.00091 18.8 4.8 0.0025 17.4 4.8 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein Iso_dh PF00180.20 gi|433637932|ref|YP_007283692.1| - 2.2e-109 365.8 0.0 2.8e-109 365.5 0.0 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase LPD15 PF18828.1 gi|433637932|ref|YP_007283692.1| - 0.17 11.7 1.0 1.1 9.2 0.4 2.3 2 0 0 2 2 2 0 Large polyvalent-protein-associated domain 15 Asparaginase_2 PF01112.18 gi|433637934|ref|YP_007283694.1| - 4.9e-60 203.1 11.2 7.2e-60 202.6 11.2 1.2 1 1 0 1 1 1 1 Asparaginase CsoSCA PF08936.10 gi|433637934|ref|YP_007283694.1| - 0.11 11.1 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase PP_kinase_C_1 PF17941.1 gi|433637935|ref|YP_007283695.1| - 1.1e-68 230.0 0.0 3e-68 228.6 0.0 1.7 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 1 PP_kinase_C PF13090.6 gi|433637935|ref|YP_007283695.1| - 3.4e-62 209.0 0.0 8.9e-61 204.3 0.0 2.2 2 0 0 2 2 2 1 Polyphosphate kinase C-terminal domain 2 PP_kinase PF02503.17 gi|433637935|ref|YP_007283695.1| - 6.6e-60 202.2 0.1 1e-59 201.6 0.1 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.6 gi|433637935|ref|YP_007283695.1| - 1.4e-29 102.5 0.0 3.5e-29 101.3 0.0 1.7 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.6 gi|433637935|ref|YP_007283695.1| - 1.9e-09 37.5 0.0 7e-05 22.7 0.0 2.5 2 1 0 2 2 2 2 PLD-like domain Metallophos PF00149.28 gi|433637936|ref|YP_007283696.1| - 8.5e-11 42.7 0.2 1.3e-10 42.1 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|433637936|ref|YP_007283696.1| - 1.2e-07 32.1 0.0 1.9e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Peptidase_M24 PF00557.24 gi|433637937|ref|YP_007283697.1| - 1e-40 139.6 0.4 1.3e-40 139.3 0.4 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 CpXC PF14353.6 gi|433637938|ref|YP_007283698.1| - 0.007 16.4 0.9 0.0086 16.1 0.9 1.1 1 0 0 1 1 1 1 CpXC protein Rpr2 PF04032.16 gi|433637938|ref|YP_007283698.1| - 0.018 15.3 0.5 0.022 15.1 0.5 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Zn-ribbon_8 PF09723.10 gi|433637938|ref|YP_007283698.1| - 0.35 11.0 5.1 8.3 6.6 5.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain HIT PF01230.23 gi|433637939|ref|YP_007283699.1| - 2.2e-13 50.8 0.0 3.8e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 HIT domain CwfJ_C_1 PF04677.15 gi|433637939|ref|YP_007283699.1| - 0.00086 19.2 0.0 0.0017 18.2 0.0 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DcpS_C PF11969.8 gi|433637939|ref|YP_007283699.1| - 0.021 15.3 0.0 0.042 14.3 0.0 1.5 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding Radical_SAM PF04055.21 gi|433637940|ref|YP_007283700.1| - 5.4e-22 78.9 0.1 1.4e-21 77.6 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|433637940|ref|YP_007283700.1| - 3.9e-20 71.7 0.2 8.4e-20 70.6 0.2 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Pterin_bind PF00809.22 gi|433637940|ref|YP_007283700.1| - 0.066 12.9 0.0 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 Pterin binding enzyme AI-2E_transport PF01594.16 gi|433637941|ref|YP_007283701.1| - 2.4e-47 161.7 27.5 2.9e-47 161.4 27.5 1.0 1 0 0 1 1 1 1 AI-2E family transporter EcsC PF12787.7 gi|433637941|ref|YP_007283701.1| - 0.2 11.3 0.1 0.32 10.6 0.1 1.5 1 0 0 1 1 1 0 EcsC protein family MTABC_N PF16185.5 gi|433637941|ref|YP_007283701.1| - 7.3 6.0 8.0 2.1 7.8 1.0 2.3 2 0 0 2 2 2 0 Mitochondrial ABC-transporter N-terminal five TM region DUF547 PF04784.14 gi|433637942|ref|YP_007283702.1| - 7.6e-26 90.6 0.0 1.1e-25 90.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF547 DZR PF12773.7 gi|433637943|ref|YP_007283703.1| - 0.0025 17.8 1.8 1.3 9.1 0.2 2.5 2 0 0 2 2 2 2 Double zinc ribbon Mut7-C PF01927.16 gi|433637943|ref|YP_007283703.1| - 0.016 15.3 0.2 5 7.2 0.1 2.4 2 0 0 2 2 2 0 Mut7-C RNAse domain zf-ribbon_3 PF13248.6 gi|433637943|ref|YP_007283703.1| - 0.022 14.2 4.2 1.1 8.8 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbon domain HypA PF01155.19 gi|433637943|ref|YP_007283703.1| - 0.083 12.9 1.8 0.19 11.8 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|433637943|ref|YP_007283703.1| - 0.49 10.4 3.4 1.1 9.3 0.2 2.4 2 1 0 2 2 2 0 zinc-ribbons Sulfatase PF00884.23 gi|433637944|ref|YP_007283704.1| - 9.2e-44 150.1 0.0 1.4e-43 149.5 0.0 1.3 1 0 0 1 1 1 1 Sulfatase DUF4976 PF16347.5 gi|433637944|ref|YP_007283704.1| - 1.2e-09 38.4 0.1 0.0017 18.6 0.0 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 gi|433637944|ref|YP_007283704.1| - 4.1e-08 33.2 0.3 4.2e-07 29.9 0.3 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase AstE_AspA PF04952.14 gi|433637945|ref|YP_007283705.1| - 4.9e-35 121.0 0.0 5.7e-35 120.8 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family OrfB_Zn_ribbon PF07282.11 gi|433637946|ref|YP_007283706.1| - 1.2e-24 86.0 3.4 3.1e-24 84.7 3.4 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|433637946|ref|YP_007283706.1| - 1.4e-07 31.8 0.0 2.7e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.12 gi|433637946|ref|YP_007283706.1| - 0.0012 18.3 1.4 0.0029 17.1 1.4 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding C1_1 PF00130.22 gi|433637946|ref|YP_007283706.1| - 0.0013 18.6 2.1 0.0027 17.5 2.1 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.7 gi|433637946|ref|YP_007283706.1| - 0.018 15.0 4.5 0.034 14.2 4.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433637946|ref|YP_007283706.1| - 0.042 13.6 5.9 0.2 11.4 5.9 2.1 1 1 1 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|433637946|ref|YP_007283706.1| - 0.074 13.1 0.6 0.16 12.0 0.6 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1_2 PF03107.16 gi|433637946|ref|YP_007283706.1| - 0.1 12.9 2.2 0.2 12.0 2.2 1.5 1 0 0 1 1 1 0 C1 domain MafB19-deam PF14437.6 gi|433637947|ref|YP_007283707.1| - 5.6e-15 55.3 0.0 6.4e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 gi|433637947|ref|YP_007283707.1| - 1e-12 47.8 0.0 1.3e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region SNAD4 PF18750.1 gi|433637947|ref|YP_007283707.1| - 0.001 19.1 0.0 0.0015 18.7 0.0 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 NAD2 PF18782.1 gi|433637947|ref|YP_007283707.1| - 0.0042 17.2 0.0 0.0049 17.0 0.0 1.1 1 0 0 1 1 1 1 Novel AID APOBEC clade 2 APOBEC2 PF18772.1 gi|433637947|ref|YP_007283707.1| - 0.0076 16.3 0.0 0.0093 16.0 0.0 1.1 1 0 0 1 1 1 1 APOBEC2 NAD1 PF18778.1 gi|433637947|ref|YP_007283707.1| - 0.012 15.7 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC_N PF08210.11 gi|433637947|ref|YP_007283707.1| - 0.015 15.2 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain Bd3614-deam PF14439.6 gi|433637947|ref|YP_007283707.1| - 0.096 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Bd3614-like deaminase Pro_isomerase PF00160.21 gi|433637948|ref|YP_007283708.1| - 1.9e-49 168.0 0.0 2.1e-49 167.8 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Arg_decarb_HB PF17810.1 gi|433637949|ref|YP_007283709.1| - 0.033 14.5 2.5 29 5.0 0.1 4.2 4 0 0 4 4 4 0 Arginine decarboxylase helical bundle domain PilJ PF13675.6 gi|433637949|ref|YP_007283709.1| - 0.068 13.2 3.4 1.3 9.1 0.3 2.8 3 0 0 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term T3SS_needle_F PF09392.10 gi|433637949|ref|YP_007283709.1| - 0.075 13.2 2.5 0.11 12.6 0.2 2.4 2 0 0 2 2 2 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AAA_32 PF13654.6 gi|433637949|ref|YP_007283709.1| - 0.077 11.8 3.5 0.096 11.5 3.5 1.1 1 0 0 1 1 1 0 AAA domain Remorin_C PF03763.13 gi|433637949|ref|YP_007283709.1| - 0.32 10.9 5.5 0.12 12.2 1.7 2.3 2 0 0 2 2 2 0 Remorin, C-terminal region Com_YlbF PF06133.11 gi|433637949|ref|YP_007283709.1| - 5.9 7.6 14.6 2.4 8.8 3.6 2.6 2 1 1 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA UPF0242 PF06785.11 gi|433637949|ref|YP_007283709.1| - 7.6 6.6 15.0 1.3 9.1 2.5 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus YlbD_coat PF14071.6 gi|433637949|ref|YP_007283709.1| - 8.5 6.7 10.4 0.19 12.0 0.3 2.5 3 0 0 3 3 3 0 Putative coat protein zinc_ribbon_9 PF14369.6 gi|433637950|ref|YP_007283710.1| - 0.17 12.2 5.2 0.73 10.2 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon HTH_10 PF04967.12 gi|433637951|ref|YP_007283711.1| - 1.6e-18 66.2 0.2 2.5e-18 65.6 0.2 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|433637951|ref|YP_007283711.1| - 0.0051 16.3 2.0 0.0091 15.5 0.9 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|433637951|ref|YP_007283711.1| - 0.017 15.0 0.0 0.042 13.8 0.0 1.6 1 0 0 1 1 1 0 HTH domain Sigma70_r4_2 PF08281.12 gi|433637951|ref|YP_007283711.1| - 0.044 13.5 0.5 7.7 6.3 0.2 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 Urocanase_C PF17392.2 gi|433637952|ref|YP_007283712.1| - 1.9e-87 291.8 0.1 3.3e-87 291.0 0.1 1.4 1 0 0 1 1 1 1 Urocanase C-terminal domain Urocanase PF01175.18 gi|433637952|ref|YP_007283712.1| - 5.7e-84 281.0 0.2 7.7e-84 280.5 0.2 1.2 1 0 0 1 1 1 1 Urocanase Rossmann-like domain Urocanase_N PF17391.2 gi|433637952|ref|YP_007283712.1| - 1.2e-58 196.4 0.0 2e-58 195.6 0.0 1.3 1 0 0 1 1 1 1 Urocanase N-terminal domain Arginase PF00491.21 gi|433637953|ref|YP_007283713.1| - 1.9e-56 191.7 1.7 2.4e-56 191.3 1.7 1.1 1 0 0 1 1 1 1 Arginase family GCH_III PF05165.12 gi|433637953|ref|YP_007283713.1| - 0.1 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 GTP cyclohydrolase III Amidohydro_3 PF07969.11 gi|433637954|ref|YP_007283714.1| - 1.7e-17 64.0 13.5 1.8e-10 40.9 8.8 2.2 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|433637954|ref|YP_007283714.1| - 1.4e-11 44.3 0.8 1.4e-09 37.8 0.8 2.3 1 1 0 1 1 1 1 Amidohydrolase family Lyase_aromatic PF00221.19 gi|433637955|ref|YP_007283715.1| - 2.5e-186 619.9 10.1 2.9e-186 619.7 10.1 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase AsnC_trans_reg PF01037.21 gi|433637957|ref|YP_007283717.1| - 1.7e-12 47.1 0.1 1.9e-12 47.0 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain BAT PF15915.5 gi|433637957|ref|YP_007283717.1| - 0.041 13.8 0.7 0.063 13.1 0.6 1.4 1 1 0 1 1 1 0 GAF and HTH_10 associated domain NapD PF03927.13 gi|433637957|ref|YP_007283717.1| - 0.046 13.8 0.6 0.077 13.1 0.6 1.3 1 1 0 1 1 1 0 NapD protein Peptidase_U57 PF05582.12 gi|433637957|ref|YP_007283717.1| - 0.066 12.5 0.2 0.073 12.3 0.2 1.1 1 0 0 1 1 1 0 YabG peptidase U57 FtsX_ECD PF18075.1 gi|433637957|ref|YP_007283717.1| - 0.073 13.7 0.1 0.79 10.4 0.0 2.0 1 1 0 2 2 2 0 FtsX extracellular domain TrkA_N PF02254.18 gi|433637958|ref|YP_007283718.1| - 1.8e-27 95.9 0.9 2.9e-27 95.2 0.9 1.3 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|433637958|ref|YP_007283718.1| - 9.4e-11 41.4 1.6 1.1e-10 41.2 0.1 1.8 2 0 0 2 2 2 1 TrkA-C domain FAD_binding_3 PF01494.19 gi|433637958|ref|YP_007283718.1| - 2.3e-07 30.4 0.1 2.6e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_7 PF13241.6 gi|433637958|ref|YP_007283718.1| - 9.8e-07 29.2 0.2 1.7e-06 28.4 0.2 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox PF00070.27 gi|433637958|ref|YP_007283718.1| - 3.1e-06 27.6 0.3 6.6e-06 26.6 0.3 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.6 gi|433637958|ref|YP_007283718.1| - 1.8e-05 24.7 1.0 3.2e-05 23.9 1.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding UDPG_MGDP_dh_N PF03721.14 gi|433637958|ref|YP_007283718.1| - 2e-05 24.2 0.0 4.9e-05 23.0 0.0 1.5 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_8 PF13450.6 gi|433637958|ref|YP_007283718.1| - 6.1e-05 23.2 0.2 0.00012 22.2 0.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|433637958|ref|YP_007283718.1| - 6.9e-05 22.6 0.7 0.00014 21.6 0.4 1.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase ApbA PF02558.16 gi|433637958|ref|YP_007283718.1| - 9.7e-05 22.0 0.1 0.00014 21.5 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 gi|433637958|ref|YP_007283718.1| - 0.00024 20.4 0.2 0.00028 20.2 0.2 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|433637958|ref|YP_007283718.1| - 0.0004 20.3 0.1 0.00052 19.9 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 gi|433637958|ref|YP_007283718.1| - 0.00086 18.9 0.1 0.0016 18.1 0.1 1.5 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain FAD_binding_2 PF00890.24 gi|433637958|ref|YP_007283718.1| - 0.0012 18.0 0.8 0.0022 17.2 0.8 1.6 1 1 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|433637958|ref|YP_007283718.1| - 0.0013 18.1 0.2 0.0015 17.9 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.6 gi|433637958|ref|YP_007283718.1| - 0.0013 19.2 0.1 0.0028 18.2 0.1 1.6 2 0 0 2 2 1 1 XdhC Rossmann domain Epimerase PF01370.21 gi|433637958|ref|YP_007283718.1| - 0.0057 16.2 0.1 0.0064 16.0 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Sacchrp_dh_NADP PF03435.18 gi|433637958|ref|YP_007283718.1| - 0.008 16.4 0.1 0.012 15.8 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|433637958|ref|YP_007283718.1| - 0.011 15.2 0.1 0.039 13.3 0.1 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|433637958|ref|YP_007283718.1| - 0.012 14.3 0.0 0.017 13.8 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein NmrA PF05368.13 gi|433637958|ref|YP_007283718.1| - 0.013 15.1 0.3 0.018 14.6 0.3 1.2 1 0 0 1 1 1 0 NmrA-like family NAD_binding_2 PF03446.15 gi|433637958|ref|YP_007283718.1| - 0.013 15.6 0.1 0.032 14.4 0.0 1.7 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Thi4 PF01946.17 gi|433637958|ref|YP_007283718.1| - 0.024 13.9 0.0 0.039 13.2 0.0 1.3 1 0 0 1 1 1 0 Thi4 family F420_oxidored PF03807.17 gi|433637958|ref|YP_007283718.1| - 0.025 15.2 0.1 0.056 14.0 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Pyr_redox_3 PF13738.6 gi|433637958|ref|YP_007283718.1| - 0.025 13.8 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Glyco_transf_4 PF13439.6 gi|433637958|ref|YP_007283718.1| - 0.042 13.8 0.6 0.12 12.3 0.4 1.8 1 1 0 2 2 2 0 Glycosyltransferase Family 4 Shikimate_DH PF01488.20 gi|433637958|ref|YP_007283718.1| - 0.074 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Glyco_trans_4_4 PF13579.6 gi|433637958|ref|YP_007283718.1| - 0.12 12.8 5.1 0.18 12.2 1.8 2.5 2 1 1 3 3 3 0 Glycosyl transferase 4-like domain NAD_Gly3P_dh_N PF01210.23 gi|433637958|ref|YP_007283718.1| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Glyco_trans_4_2 PF13477.6 gi|433637958|ref|YP_007283718.1| - 0.19 11.7 0.0 0.38 10.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like AsnC_trans_reg PF01037.21 gi|433637959|ref|YP_007283719.1| - 3.3e-09 36.6 0.2 3.7e-09 36.4 0.2 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Thymidylate_kin PF02223.17 gi|433637960|ref|YP_007283720.1| - 1.1e-38 132.8 0.0 1.3e-38 132.6 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_33 PF13671.6 gi|433637960|ref|YP_007283720.1| - 0.00099 19.3 0.0 0.0029 17.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|433637960|ref|YP_007283720.1| - 0.0033 17.3 0.0 0.014 15.3 0.0 2.0 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_28 PF13521.6 gi|433637960|ref|YP_007283720.1| - 0.0035 17.6 0.9 0.0057 16.9 0.9 1.4 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|433637960|ref|YP_007283720.1| - 0.0091 16.5 0.0 0.036 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|433637960|ref|YP_007283720.1| - 0.014 15.8 0.0 3 8.3 0.0 2.6 2 1 1 3 3 3 0 AAA domain AAA_22 PF13401.6 gi|433637960|ref|YP_007283720.1| - 0.19 12.0 0.0 1.3 9.3 0.0 2.2 2 1 0 2 2 2 0 AAA domain NAD_binding_10 PF13460.6 gi|433637961|ref|YP_007283721.1| - 1.4e-25 90.2 0.0 1.9e-25 89.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|433637961|ref|YP_007283721.1| - 2.8e-19 69.6 0.0 6.3e-18 65.1 0.0 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 gi|433637961|ref|YP_007283721.1| - 3e-14 53.2 0.0 3.8e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 gi|433637961|ref|YP_007283721.1| - 4.4e-13 48.9 0.0 3e-10 39.6 0.0 2.1 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|433637961|ref|YP_007283721.1| - 3.1e-11 42.9 0.0 1.9e-06 27.2 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain GDP_Man_Dehyd PF16363.5 gi|433637961|ref|YP_007283721.1| - 4.1e-09 36.3 0.0 9e-09 35.2 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase adh_short PF00106.25 gi|433637961|ref|YP_007283721.1| - 8.2e-06 25.4 0.1 1.4e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433637961|ref|YP_007283721.1| - 0.00062 19.7 0.1 0.002 18.1 0.1 1.8 1 1 0 1 1 1 1 KR domain NAD_binding_4 PF07993.12 gi|433637961|ref|YP_007283721.1| - 0.0007 18.8 0.0 0.3 10.2 0.0 2.4 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|433637961|ref|YP_007283721.1| - 0.00077 18.7 0.0 0.021 14.0 0.0 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein TrkA_N PF02254.18 gi|433637961|ref|YP_007283721.1| - 0.0055 17.0 0.0 0.0095 16.2 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain Glyco_transf_4 PF13439.6 gi|433637961|ref|YP_007283721.1| - 0.017 15.1 0.1 0.027 14.4 0.1 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|433637961|ref|YP_007283721.1| - 0.022 15.2 1.9 0.05 14.1 1.9 2.0 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain NAD_binding_2 PF03446.15 gi|433637961|ref|YP_007283721.1| - 0.032 14.4 0.0 0.056 13.6 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|433637961|ref|YP_007283721.1| - 0.045 13.4 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|433637961|ref|YP_007283721.1| - 0.069 13.7 0.0 0.15 12.7 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|433637961|ref|YP_007283721.1| - 0.09 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 gi|433637961|ref|YP_007283721.1| - 0.17 11.5 0.2 0.35 10.4 0.0 1.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tubulin PF00091.25 gi|433637962|ref|YP_007283722.1| - 2.7e-28 99.5 0.0 5.5e-28 98.5 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Endotoxin_C2 PF18449.1 gi|433637962|ref|YP_007283722.1| - 0.037 14.4 0.0 0.096 13.0 0.0 1.7 1 0 0 1 1 1 0 Delta endotoxin Tubulin_2 PF13809.6 gi|433637962|ref|YP_007283722.1| - 0.053 12.7 0.1 0.082 12.1 0.1 1.4 1 0 0 1 1 1 0 Tubulin like CofC PF01983.16 gi|433637963|ref|YP_007283723.1| - 1.1e-41 142.4 0.0 1.3e-41 142.2 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|433637963|ref|YP_007283723.1| - 0.0027 18.1 1.3 0.0036 17.7 1.3 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain SAM_MT PF04445.13 gi|433637963|ref|YP_007283723.1| - 0.01 15.3 0.1 0.014 14.9 0.1 1.2 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase NLE PF08154.12 gi|433637963|ref|YP_007283723.1| - 0.081 13.5 0.0 0.18 12.4 0.0 1.5 1 0 0 1 1 1 0 NLE (NUC135) domain Radical_SAM PF04055.21 gi|433637964|ref|YP_007283724.1| - 3.6e-11 43.7 0.0 7.3e-11 42.7 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily CbiZ PF01955.18 gi|433637964|ref|YP_007283724.1| - 0.13 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Adenosylcobinamide amidohydrolase Peptidase_M48_N PF16491.5 gi|433637965|ref|YP_007283725.1| - 2.4e-37 128.6 0.7 2.4e-37 128.6 0.7 1.9 3 0 0 3 3 3 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 gi|433637965|ref|YP_007283725.1| - 1.3e-33 116.4 0.0 2.1e-33 115.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|433637965|ref|YP_007283725.1| - 0.0079 15.4 0.2 0.0079 15.4 0.2 1.7 2 0 0 2 2 2 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|433637965|ref|YP_007283725.1| - 0.055 13.3 0.0 0.099 12.5 0.0 1.4 1 0 0 1 1 1 0 SprT-like family DUF2268 PF10026.9 gi|433637965|ref|YP_007283725.1| - 0.072 12.7 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) PIN PF01850.21 gi|433637966|ref|YP_007283726.1| - 7.1e-14 52.4 0.5 8.2e-14 52.2 0.5 1.0 1 0 0 1 1 1 1 PIN domain MazE_antitoxin PF04014.18 gi|433637967|ref|YP_007283727.1| - 4.6e-06 26.4 0.0 6.5e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|433637967|ref|YP_007283727.1| - 0.00017 22.0 0.0 0.0002 21.7 0.0 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin peroxidase PF00141.23 gi|433637968|ref|YP_007283728.1| - 2.2e-89 299.1 0.0 1.9e-49 168.4 0.0 2.2 2 0 0 2 2 2 2 Peroxidase STI1 PF17830.1 gi|433637968|ref|YP_007283728.1| - 0.087 12.8 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 STI1 domain L27_N PF09060.10 gi|433637968|ref|YP_007283728.1| - 0.63 10.1 2.0 0.66 10.1 0.6 1.8 2 0 0 2 2 2 0 L27_N MarR_2 PF12802.7 gi|433637970|ref|YP_007283730.1| - 3.4e-05 23.6 0.1 4.7e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|433637970|ref|YP_007283730.1| - 0.00025 20.9 0.1 0.00038 20.4 0.1 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|433637970|ref|YP_007283730.1| - 0.0018 18.6 0.0 0.0027 18.0 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|433637970|ref|YP_007283730.1| - 0.0041 17.6 0.2 0.011 16.2 0.1 1.9 1 1 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|433637970|ref|YP_007283730.1| - 0.0072 16.4 0.0 0.0093 16.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|433637970|ref|YP_007283730.1| - 0.022 14.6 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF742 PF05331.11 gi|433637970|ref|YP_007283730.1| - 0.033 14.0 0.0 0.039 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF742) Fe_dep_repress PF01325.19 gi|433637970|ref|YP_007283730.1| - 0.048 13.9 0.0 0.085 13.1 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|433637970|ref|YP_007283730.1| - 0.068 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR PF01047.22 gi|433637970|ref|YP_007283730.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|433637970|ref|YP_007283730.1| - 0.14 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix META PF03724.16 gi|433637972|ref|YP_007283732.1| - 0.03 14.3 1.4 0.8 9.7 0.3 2.5 2 0 0 2 2 2 0 META domain Acetyltransf_2 PF00797.17 gi|433637973|ref|YP_007283733.1| - 2.2e-35 122.6 0.0 3.9e-34 118.5 0.0 1.9 1 1 0 1 1 1 1 N-acetyltransferase Wyosine_form PF08608.12 gi|433637975|ref|YP_007283735.1| - 1.2e-21 76.8 0.1 3.5e-21 75.3 0.0 1.8 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.21 gi|433637975|ref|YP_007283735.1| - 8.2e-20 71.8 0.2 2e-19 70.6 0.2 1.6 1 1 0 1 1 1 1 Radical SAM superfamily AP_endonuc_2 PF01261.24 gi|433637975|ref|YP_007283735.1| - 0.017 14.6 0.1 0.025 14.0 0.1 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel LacY_symp PF01306.19 gi|433637976|ref|YP_007283736.1| - 0.14 10.9 0.2 0.18 10.6 0.2 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF401 PF04165.12 gi|433637976|ref|YP_007283736.1| - 0.23 10.8 1.8 0.27 10.5 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF401) Bax1-I PF01027.20 gi|433637976|ref|YP_007283736.1| - 0.34 10.7 3.4 0.39 10.5 3.4 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 Hydrolase_3 PF08282.12 gi|433637977|ref|YP_007283737.1| - 2.4e-24 86.5 0.0 1.9e-17 63.8 0.0 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|433637977|ref|YP_007283737.1| - 1.1e-05 25.1 0.0 3.5e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 gi|433637977|ref|YP_007283737.1| - 9.8e-05 22.8 3.6 0.045 14.2 0.1 3.3 1 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433637977|ref|YP_007283737.1| - 0.00022 21.6 0.1 0.048 14.0 0.0 2.8 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|433637977|ref|YP_007283737.1| - 0.45 10.6 0.0 0.45 10.6 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF368 PF04018.13 gi|433637980|ref|YP_007283740.1| - 7.3e-66 222.2 15.1 7.3e-66 222.2 15.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF368) AglB_L1 PF18079.1 gi|433637981|ref|YP_007283741.1| - 4.7e-23 81.3 4.1 9.2e-23 80.4 4.1 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain Glycos_transf_1 PF00534.20 gi|433637982|ref|YP_007283742.1| - 3.4e-28 98.3 0.0 5.9e-28 97.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433637982|ref|YP_007283742.1| - 4.7e-26 91.8 0.0 2.3e-25 89.6 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_2 PF00535.26 gi|433637982|ref|YP_007283742.1| - 3e-25 89.0 0.1 8.8e-25 87.5 0.1 1.9 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433637982|ref|YP_007283742.1| - 3.8e-15 56.4 0.5 1.5e-14 54.5 0.4 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|433637982|ref|YP_007283742.1| - 1.4e-07 31.3 0.3 1.3e-05 24.8 0.1 2.9 3 0 0 3 3 3 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|433637982|ref|YP_007283742.1| - 1.9e-07 31.2 0.1 3.2e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_trans_4_4 PF13579.6 gi|433637982|ref|YP_007283742.1| - 0.00075 20.0 3.1 0.00075 20.0 3.1 2.4 3 0 0 3 3 3 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|433637982|ref|YP_007283742.1| - 0.0015 18.8 0.0 0.0053 17.1 0.0 2.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_21 PF13506.6 gi|433637982|ref|YP_007283742.1| - 0.018 14.5 0.0 0.047 13.2 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 21 Polysacc_synt_3 PF13440.6 gi|433637983|ref|YP_007283743.1| - 6.4e-15 55.1 15.2 8.6e-13 48.2 2.8 2.7 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433637983|ref|YP_007283743.1| - 4.5e-14 52.7 16.0 4.5e-14 52.7 16.0 4.1 3 2 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433637983|ref|YP_007283743.1| - 1.2e-09 37.3 11.4 1.2e-09 37.3 11.4 2.1 2 1 0 2 2 2 1 Lipid II flippase MurJ Polysacc_synt PF01943.17 gi|433637983|ref|YP_007283743.1| - 2.9e-09 36.7 20.2 2.9e-09 36.7 20.2 3.1 3 2 0 3 3 3 1 Polysaccharide biosynthesis protein PCMT PF01135.19 gi|433637984|ref|YP_007283744.1| - 2.4e-06 27.5 0.0 3.3e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_21 PF05050.12 gi|433637984|ref|YP_007283744.1| - 4.1e-05 23.7 0.0 0.00036 20.6 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_24 PF13578.6 gi|433637984|ref|YP_007283744.1| - 0.0037 18.3 0.1 0.0092 17.0 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain HTH_39 PF14090.6 gi|433637984|ref|YP_007283744.1| - 0.06 13.1 0.1 0.26 11.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain YajC PF02699.15 gi|433637984|ref|YP_007283744.1| - 0.18 11.7 0.1 0.51 10.3 0.1 1.8 1 1 1 2 2 2 0 Preprotein translocase subunit MTS PF05175.14 gi|433637984|ref|YP_007283744.1| - 0.19 11.2 0.1 0.34 10.5 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Glycos_transf_1 PF00534.20 gi|433637985|ref|YP_007283745.1| - 1.9e-16 60.1 0.0 9e-16 57.9 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433637985|ref|YP_007283745.1| - 1.2e-14 54.8 0.2 4.5e-14 53.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|433637985|ref|YP_007283745.1| - 9.5e-08 32.3 0.0 2.1e-07 31.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF5616 PF18481.1 gi|433637985|ref|YP_007283745.1| - 0.024 14.9 0.0 0.05 13.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) CdhD PF03599.16 gi|433637985|ref|YP_007283745.1| - 0.095 11.4 0.0 0.14 10.8 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit Glyco_tranf_2_3 PF13641.6 gi|433637986|ref|YP_007283746.1| - 4.9e-13 49.5 0.1 6.2e-13 49.2 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|433637986|ref|YP_007283746.1| - 3.7e-12 46.4 0.0 5.2e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|433637986|ref|YP_007283746.1| - 8.8e-05 22.0 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|433637986|ref|YP_007283746.1| - 0.013 15.4 0.0 0.032 14.2 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|433637986|ref|YP_007283746.1| - 0.014 15.9 1.9 0.019 15.5 0.4 2.0 2 2 0 2 2 2 0 Glycosyl transferase family 2 Methyltransf_11 PF08241.12 gi|433637987|ref|YP_007283747.1| - 1.2e-09 38.7 0.2 8.6e-09 35.9 0.2 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433637987|ref|YP_007283747.1| - 5.3e-07 29.6 0.2 4e-06 26.8 0.2 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433637987|ref|YP_007283747.1| - 3.9e-06 27.5 1.3 0.00011 22.8 0.0 2.6 2 1 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433637987|ref|YP_007283747.1| - 1.8e-05 24.6 0.0 0.0016 18.2 0.0 2.2 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433637987|ref|YP_007283747.1| - 2e-05 25.2 0.3 9.3e-05 23.1 0.0 2.1 3 0 0 3 3 3 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433637987|ref|YP_007283747.1| - 0.06 12.7 0.0 0.13 11.6 0.0 1.6 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Phosphodiest PF01663.22 gi|433637988|ref|YP_007283748.1| - 2.5e-07 30.6 0.4 4.4e-07 29.8 0.4 1.3 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase TFR_dimer PF04253.15 gi|433637990|ref|YP_007283750.1| - 0.14 12.3 0.8 0.59 10.2 0.0 2.3 1 1 1 3 3 3 0 Transferrin receptor-like dimerisation domain MIT PF04212.18 gi|433637990|ref|YP_007283750.1| - 0.41 10.8 2.5 12 6.0 0.2 2.6 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain Sulfatase PF00884.23 gi|433637991|ref|YP_007283751.1| - 2.6e-06 27.1 0.0 3.9e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Sulfatase PglZ PF08665.12 gi|433637991|ref|YP_007283751.1| - 0.00019 21.6 0.3 0.0056 16.8 0.0 2.2 2 0 0 2 2 2 1 PglZ domain Glyphos_transf PF04464.14 gi|433637992|ref|YP_007283752.1| - 2.7e-60 204.3 0.0 3.2e-60 204.1 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NTP_transf_3 PF12804.7 gi|433637993|ref|YP_007283753.1| - 6.4e-17 62.4 0.0 1e-16 61.7 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|433637993|ref|YP_007283753.1| - 2e-09 37.4 0.0 2.6e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 gi|433637993|ref|YP_007283753.1| - 2.7e-06 27.3 0.0 5.7e-06 26.2 0.0 1.5 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF3670 PF12419.8 gi|433637993|ref|YP_007283753.1| - 0.022 14.6 0.8 0.048 13.5 0.5 1.7 1 1 0 1 1 1 0 SNF2 Helicase protein Glycos_transf_2 PF00535.26 gi|433637994|ref|YP_007283754.1| - 4.8e-22 78.5 0.0 6.7e-22 78.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433637994|ref|YP_007283754.1| - 9.5e-16 58.4 0.1 3e-15 56.8 0.1 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|433637994|ref|YP_007283754.1| - 1.2e-05 24.9 0.4 0.00038 20.0 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|433637994|ref|YP_007283754.1| - 0.0049 16.8 0.0 0.0082 16.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 PCAF_N PF06466.11 gi|433637994|ref|YP_007283754.1| - 0.069 12.7 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain N_formyltrans_C PF18216.1 gi|433637994|ref|YP_007283754.1| - 0.071 12.8 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 N-formyltransferase dimerization C-terminal domain CMV_1a_C PF12503.8 gi|433637994|ref|YP_007283754.1| - 0.12 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein C terminal Glycos_transf_1 PF00534.20 gi|433637996|ref|YP_007283756.1| - 3.2e-20 72.4 0.0 5e-20 71.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433637996|ref|YP_007283756.1| - 3.3e-15 56.7 0.2 1.5e-14 54.5 0.1 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433637996|ref|YP_007283756.1| - 4.5e-12 46.7 0.7 7.7e-12 45.9 0.7 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|433637996|ref|YP_007283756.1| - 3.6e-08 33.6 0.1 6.2e-08 32.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|433637996|ref|YP_007283756.1| - 7.2e-07 29.5 0.0 1.7e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2375 PF09558.10 gi|433637996|ref|YP_007283756.1| - 0.086 12.9 0.0 21 5.2 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2375) Hexapep PF00132.24 gi|433637997|ref|YP_007283757.1| - 1.3e-23 81.7 11.3 3.1e-07 29.8 0.1 5.1 4 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433637997|ref|YP_007283757.1| - 2.4e-18 65.6 12.0 1.3e-05 24.9 0.3 5.7 5 1 1 6 6 6 5 Hexapeptide repeat of succinyl-transferase LpxI_C PF06230.11 gi|433637997|ref|YP_007283757.1| - 0.38 10.6 2.3 15 5.4 0.0 2.2 1 1 1 2 2 2 0 LpxI C-terminal domain DegT_DnrJ_EryC1 PF01041.17 gi|433637998|ref|YP_007283758.1| - 6.2e-121 404.1 0.2 7e-121 403.9 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|433637998|ref|YP_007283758.1| - 2.2e-09 37.0 0.1 7.2e-09 35.3 0.1 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|433637998|ref|YP_007283758.1| - 7.5e-07 28.6 0.1 2.3e-06 27.0 0.1 1.8 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433637998|ref|YP_007283758.1| - 0.0015 17.6 0.0 0.0029 16.6 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.20 gi|433637998|ref|YP_007283758.1| - 0.017 13.9 0.0 0.027 13.2 0.0 1.3 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.20 gi|433637998|ref|YP_007283758.1| - 0.028 13.0 0.0 0.081 11.4 0.0 1.7 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme PALP PF00291.25 gi|433637998|ref|YP_007283758.1| - 0.033 13.6 0.4 0.056 12.8 0.3 1.4 1 1 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme GFO_IDH_MocA PF01408.22 gi|433637999|ref|YP_007283759.1| - 7.5e-22 78.4 0.8 1.7e-21 77.2 0.1 1.9 3 0 0 3 3 3 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.19 gi|433637999|ref|YP_007283759.1| - 4.9e-06 27.2 0.9 1e-05 26.2 0.1 1.8 2 0 0 2 2 2 1 CoA binding domain 2-Hacid_dh_C PF02826.19 gi|433637999|ref|YP_007283759.1| - 9.1e-05 21.9 0.1 0.00051 19.5 0.0 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|433637999|ref|YP_007283759.1| - 0.00096 18.8 0.1 0.002 17.7 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|433637999|ref|YP_007283759.1| - 0.0093 16.1 0.0 0.019 15.1 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA_C PF02894.17 gi|433637999|ref|YP_007283759.1| - 0.033 14.2 0.0 0.06 13.4 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain Sacchrp_dh_NADP PF03435.18 gi|433637999|ref|YP_007283759.1| - 0.033 14.4 0.7 0.38 11.0 0.2 2.6 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|433637999|ref|YP_007283759.1| - 0.034 14.7 0.0 0.096 13.3 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|433638000|ref|YP_007283760.1| - 5.4e-41 140.2 0.1 8.6e-41 139.6 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|433638000|ref|YP_007283760.1| - 2.4e-19 69.3 0.0 6.9e-19 67.8 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|433638000|ref|YP_007283760.1| - 6.2e-14 52.3 0.1 2.1e-13 50.6 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|433638000|ref|YP_007283760.1| - 2.8e-07 30.8 0.1 9.3e-07 29.1 0.0 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|433638000|ref|YP_007283760.1| - 8e-07 29.2 0.0 4.7e-06 26.7 0.0 2.2 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|433638000|ref|YP_007283760.1| - 0.034 14.0 0.1 0.059 13.2 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase_2 PF02350.19 gi|433638001|ref|YP_007283761.1| - 6.9e-104 347.4 0.0 8.2e-104 347.2 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Sulfatase PF00884.23 gi|433638002|ref|YP_007283762.1| - 0.0048 16.3 0.1 0.0056 16.1 0.1 1.2 1 0 0 1 1 1 1 Sulfatase Glyco_trans_1_4 PF13692.6 gi|433638003|ref|YP_007283763.1| - 5.4e-21 75.4 0.0 8.7e-21 74.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|433638003|ref|YP_007283763.1| - 2.4e-19 69.5 0.0 4.2e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433638003|ref|YP_007283763.1| - 1.9e-17 64.2 0.2 4.4e-16 59.7 0.1 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|433638003|ref|YP_007283763.1| - 1.5e-16 60.8 0.4 1.2e-15 57.9 0.2 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|433638003|ref|YP_007283763.1| - 6.7e-10 39.2 0.0 1.5e-09 38.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|433638003|ref|YP_007283763.1| - 4.4e-09 36.5 0.0 3.7e-07 30.3 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like DUF563 PF04577.14 gi|433638004|ref|YP_007283764.1| - 5.1e-39 134.6 0.0 8.1e-39 133.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF563) GDP_Man_Dehyd PF16363.5 gi|433638005|ref|YP_007283765.1| - 1.9e-55 188.6 0.0 2.5e-55 188.2 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|433638005|ref|YP_007283765.1| - 1.2e-54 185.3 0.0 1.5e-54 185.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|433638005|ref|YP_007283765.1| - 4.2e-16 58.9 0.0 9.6e-16 57.7 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|433638005|ref|YP_007283765.1| - 9e-13 47.9 0.0 1.2e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|433638005|ref|YP_007283765.1| - 5.5e-11 42.1 0.1 2.6e-07 30.1 0.1 2.2 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|433638005|ref|YP_007283765.1| - 4.8e-08 32.5 0.0 0.0024 17.1 0.0 2.5 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein adh_short PF00106.25 gi|433638005|ref|YP_007283765.1| - 0.00025 20.5 0.0 0.00045 19.7 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433638005|ref|YP_007283765.1| - 0.054 13.4 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 KR domain Hydrolase_4 PF12146.8 gi|433638005|ref|YP_007283765.1| - 0.21 10.8 0.0 0.39 10.0 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Glycos_transf_1 PF00534.20 gi|433638006|ref|YP_007283766.1| - 2e-13 50.3 0.0 2.8e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433638006|ref|YP_007283766.1| - 1.2e-07 32.2 0.0 1.9e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase PF01370.21 gi|433638007|ref|YP_007283767.1| - 1.1e-38 133.1 0.0 1.7e-38 132.5 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433638007|ref|YP_007283767.1| - 1.2e-33 117.0 0.0 6.1e-33 114.6 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|433638007|ref|YP_007283767.1| - 1.4e-13 50.6 0.0 3.6e-12 46.0 0.0 2.1 2 0 0 2 2 2 1 Male sterility protein 3Beta_HSD PF01073.19 gi|433638007|ref|YP_007283767.1| - 1.9e-09 37.0 0.6 4e-09 35.9 0.6 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|433638007|ref|YP_007283767.1| - 1.7e-07 30.6 0.0 1.1e-06 28.1 0.0 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|433638007|ref|YP_007283767.1| - 2.2e-05 23.7 0.0 4.7e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 gi|433638007|ref|YP_007283767.1| - 5.3e-05 22.8 0.0 8.4e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433638007|ref|YP_007283767.1| - 0.00027 20.9 0.0 0.00091 19.2 0.0 1.8 1 1 0 1 1 1 1 KR domain PglZ PF08665.12 gi|433638008|ref|YP_007283768.1| - 0.0056 16.8 0.2 0.026 14.6 0.0 2.0 2 0 0 2 2 2 1 PglZ domain Sulfatase PF00884.23 gi|433638008|ref|YP_007283768.1| - 0.018 14.5 0.0 0.027 13.9 0.0 1.3 1 0 0 1 1 1 0 Sulfatase ABC_tran PF00005.27 gi|433638009|ref|YP_007283769.1| - 2.5e-33 115.5 0.0 4.6e-33 114.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 gi|433638009|ref|YP_007283769.1| - 3.1e-17 63.1 3.9 1.5e-16 60.8 4.1 1.8 1 1 1 2 2 2 1 ABC transporter transmembrane region SMC_N PF02463.19 gi|433638009|ref|YP_007283769.1| - 7e-08 32.2 0.3 5.9e-06 25.9 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|433638009|ref|YP_007283769.1| - 1.8e-05 24.7 0.0 4.9e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 gi|433638009|ref|YP_007283769.1| - 0.00023 21.7 0.0 0.00046 20.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433638009|ref|YP_007283769.1| - 0.0025 17.5 0.0 0.0051 16.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433638009|ref|YP_007283769.1| - 0.0037 17.5 0.1 0.029 14.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433638009|ref|YP_007283769.1| - 0.0042 17.5 0.2 0.015 15.7 0.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|433638009|ref|YP_007283769.1| - 0.028 14.0 0.0 0.21 11.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|433638009|ref|YP_007283769.1| - 0.061 12.6 0.0 0.12 11.6 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|433638009|ref|YP_007283769.1| - 0.1 12.3 0.1 0.39 10.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.6 gi|433638009|ref|YP_007283769.1| - 0.1 12.4 0.0 0.45 10.3 0.0 2.1 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system IstB_IS21 PF01695.17 gi|433638009|ref|YP_007283769.1| - 0.12 12.0 0.1 0.48 10.1 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein Trypan_PARP PF05887.11 gi|433638010|ref|YP_007283770.1| - 0.79 9.7 15.0 1.1 9.2 15.0 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF3368 PF11848.8 gi|433638011|ref|YP_007283771.1| - 3.1e-12 46.1 0.0 1.2e-11 44.1 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF3368) UPF0175 PF03683.13 gi|433638012|ref|YP_007283772.1| - 4.7e-07 29.4 0.4 4.7e-07 29.4 0.4 1.7 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0175) RHH_1 PF01402.21 gi|433638012|ref|YP_007283772.1| - 0.018 15.0 1.8 0.018 15.0 1.8 2.5 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family FAD_binding_2 PF00890.24 gi|433638014|ref|YP_007283774.1| - 0.0071 15.5 0.2 0.0082 15.3 0.2 1.0 1 0 0 1 1 1 1 FAD binding domain HTH_20 PF12840.7 gi|433638014|ref|YP_007283774.1| - 0.053 13.6 0.0 0.56 10.3 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|433638014|ref|YP_007283774.1| - 0.062 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB GDP_Man_Dehyd PF16363.5 gi|433638015|ref|YP_007283775.1| - 8.3e-69 232.5 0.2 1e-68 232.2 0.2 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|433638015|ref|YP_007283775.1| - 9.4e-66 221.7 0.3 1.2e-65 221.4 0.3 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|433638015|ref|YP_007283775.1| - 3e-22 79.0 0.5 3.7e-22 78.8 0.5 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|433638015|ref|YP_007283775.1| - 4.9e-22 78.2 0.0 6.5e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|433638015|ref|YP_007283775.1| - 3.5e-20 72.3 0.0 1.4e-19 70.3 0.0 1.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|433638015|ref|YP_007283775.1| - 5.7e-10 39.4 0.1 6e-09 36.1 0.1 2.3 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|433638015|ref|YP_007283775.1| - 1.8e-09 37.1 0.4 1.2e-08 34.5 0.4 2.1 1 1 0 1 1 1 1 Male sterility protein KR PF08659.10 gi|433638015|ref|YP_007283775.1| - 2.5e-08 34.1 0.0 5.7e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 gi|433638015|ref|YP_007283775.1| - 5.9e-07 29.1 0.2 1.5e-06 27.9 0.0 1.8 2 1 0 2 2 2 1 short chain dehydrogenase NmrA PF05368.13 gi|433638015|ref|YP_007283775.1| - 6.6e-06 25.8 0.1 9.4e-06 25.3 0.1 1.5 1 1 0 1 1 1 1 NmrA-like family adh_short_C2 PF13561.6 gi|433638015|ref|YP_007283775.1| - 5.7e-05 22.8 0.1 0.00026 20.6 0.0 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase TrkA_N PF02254.18 gi|433638015|ref|YP_007283775.1| - 0.00049 20.3 0.1 0.005 17.1 0.1 2.4 1 1 0 1 1 1 1 TrkA-N domain 3HCDH_N PF02737.18 gi|433638015|ref|YP_007283775.1| - 0.003 17.5 0.0 0.0089 15.9 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|433638015|ref|YP_007283775.1| - 0.017 15.2 0.1 0.078 13.1 0.0 2.0 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.16 gi|433638015|ref|YP_007283775.1| - 0.039 13.6 0.0 0.075 12.7 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 gi|433638015|ref|YP_007283775.1| - 0.044 14.3 0.0 0.1 13.2 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|433638015|ref|YP_007283775.1| - 0.046 14.2 0.0 0.098 13.1 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox_2 PF07992.14 gi|433638015|ref|YP_007283775.1| - 0.059 12.6 0.0 0.095 11.9 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|433638015|ref|YP_007283775.1| - 0.07 13.3 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|433638015|ref|YP_007283775.1| - 0.074 12.6 0.1 0.16 11.5 0.1 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_8 PF13450.6 gi|433638015|ref|YP_007283775.1| - 0.08 13.2 0.3 0.2 11.9 0.3 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain PIN PF01850.21 gi|433638016|ref|YP_007283776.1| - 1.3e-07 32.1 0.2 2.1e-07 31.5 0.2 1.3 1 1 0 1 1 1 1 PIN domain SIS PF01380.22 gi|433638018|ref|YP_007283778.1| - 1.1e-37 128.8 0.1 2e-17 63.3 0.1 2.6 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|433638018|ref|YP_007283778.1| - 1.4e-18 67.4 0.8 2.6e-16 60.0 0.8 2.7 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|433638018|ref|YP_007283778.1| - 1.7e-14 53.8 0.0 3e-12 46.5 0.0 2.5 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|433638018|ref|YP_007283778.1| - 0.14 11.1 0.1 0.37 9.6 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferases class-II NTP_transferase PF00483.23 gi|433638019|ref|YP_007283779.1| - 1.6e-41 142.6 0.0 2.6e-41 141.8 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433638019|ref|YP_007283779.1| - 2.8e-18 66.8 1.0 5.4e-18 65.9 1.0 1.6 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|433638019|ref|YP_007283779.1| - 1.8e-15 55.9 27.4 1e-06 28.2 1.8 4.7 3 1 3 6 6 6 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433638019|ref|YP_007283779.1| - 3.3e-09 36.3 22.6 1.2e-05 24.9 2.0 4.2 3 1 1 4 4 4 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|433638019|ref|YP_007283779.1| - 3.9e-06 26.8 0.1 3.9e-06 26.8 0.1 1.6 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|433638019|ref|YP_007283779.1| - 8.2e-05 20.9 0.1 0.00012 20.3 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|433638019|ref|YP_007283779.1| - 0.056 12.4 0.0 0.084 11.8 0.0 1.2 1 0 0 1 1 1 0 L-fucokinase NTP_transferase PF00483.23 gi|433638020|ref|YP_007283780.1| - 3.8e-37 128.2 0.0 6.4e-37 127.5 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433638020|ref|YP_007283780.1| - 2.3e-16 60.5 0.2 3.7e-16 59.9 0.2 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|433638020|ref|YP_007283780.1| - 6.7e-10 38.3 10.7 0.021 14.6 0.1 4.6 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) IspD PF01128.19 gi|433638020|ref|YP_007283780.1| - 0.00012 21.9 0.0 0.00019 21.2 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase US10 PF17617.2 gi|433638020|ref|YP_007283780.1| - 0.062 13.4 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Viral unique short region 10 DUF4954 PF16314.5 gi|433638020|ref|YP_007283780.1| - 0.33 9.0 0.3 0.43 8.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 gi|433638020|ref|YP_007283780.1| - 9.2 6.1 11.9 11 5.8 0.0 4.8 5 1 0 5 5 5 0 Hexapeptide repeat of succinyl-transferase PGM_PMM_I PF02878.16 gi|433638021|ref|YP_007283781.1| - 7.8e-31 106.6 0.0 1.2e-30 106.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|433638021|ref|YP_007283781.1| - 1.9e-18 67.0 0.1 1.9e-18 67.0 0.1 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|433638021|ref|YP_007283781.1| - 1e-17 64.3 0.0 2.8e-17 63.0 0.0 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|433638021|ref|YP_007283781.1| - 3.7e-10 39.8 2.2 7.7e-10 38.8 0.1 2.6 3 0 0 3 3 3 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pyr_redox_2 PF07992.14 gi|433638021|ref|YP_007283781.1| - 0.053 12.8 0.0 0.1 11.8 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_23 PF13489.6 gi|433638021|ref|YP_007283781.1| - 0.15 11.9 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain NTP_transferase PF00483.23 gi|433638022|ref|YP_007283782.1| - 3e-40 138.4 0.0 3.6e-40 138.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433638022|ref|YP_007283782.1| - 9.8e-15 55.3 0.0 1.1e-14 55.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|433638022|ref|YP_007283782.1| - 3.4e-06 27.0 0.0 2.1e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UDPG_MGDP_dh_N PF03721.14 gi|433638024|ref|YP_007283784.1| - 1.1e-49 168.5 0.0 4.9e-49 166.4 0.0 1.9 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|433638024|ref|YP_007283784.1| - 2.4e-33 114.2 0.0 4.6e-33 113.3 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|433638024|ref|YP_007283784.1| - 5.2e-23 81.5 0.0 1.2e-22 80.3 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3HCDH_N PF02737.18 gi|433638024|ref|YP_007283784.1| - 3.3e-05 23.8 0.0 7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|433638024|ref|YP_007283784.1| - 0.00019 21.1 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|433638024|ref|YP_007283784.1| - 0.00026 21.0 0.0 0.00064 19.7 0.0 1.7 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|433638024|ref|YP_007283784.1| - 0.0015 19.0 0.7 0.032 14.8 0.5 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|433638024|ref|YP_007283784.1| - 0.0048 16.2 0.0 0.0079 15.5 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|433638024|ref|YP_007283784.1| - 0.02 15.1 3.1 0.11 12.7 0.1 3.2 3 1 0 3 3 3 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|433638024|ref|YP_007283784.1| - 0.058 12.8 0.1 0.19 11.1 0.0 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|433638024|ref|YP_007283784.1| - 0.076 13.3 0.1 0.24 11.6 0.1 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NAD_binding_11 PF14833.6 gi|433638024|ref|YP_007283784.1| - 0.15 12.3 0.3 0.37 11.0 0.3 1.6 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Rossmann-like PF10727.9 gi|433638024|ref|YP_007283784.1| - 0.22 11.4 5.6 0.21 11.5 0.4 2.8 3 0 0 3 3 3 0 Rossmann-like domain DNA_binding_1 PF01035.20 gi|433638025|ref|YP_007283785.1| - 7.5e-27 93.3 0.0 1.1e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Ets PF00178.22 gi|433638026|ref|YP_007283786.1| - 0.023 15.1 0.0 0.048 14.1 0.0 1.4 1 0 0 1 1 1 0 Ets-domain Rrf2 PF02082.20 gi|433638027|ref|YP_007283787.1| - 3.9e-08 33.5 0.0 1e-07 32.2 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator HTH_20 PF12840.7 gi|433638027|ref|YP_007283787.1| - 0.00017 21.6 0.1 0.0017 18.4 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Ribosomal_S25 PF03297.15 gi|433638027|ref|YP_007283787.1| - 0.0036 17.5 0.0 0.0095 16.1 0.0 1.7 2 0 0 2 2 2 1 S25 ribosomal protein MarR_2 PF12802.7 gi|433638027|ref|YP_007283787.1| - 0.011 15.6 0.2 0.45 10.4 0.0 2.3 2 0 0 2 2 2 0 MarR family HTH_DeoR PF08220.12 gi|433638027|ref|YP_007283787.1| - 0.016 14.9 0.1 0.039 13.7 0.1 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|433638027|ref|YP_007283787.1| - 0.043 13.6 0.2 0.18 11.6 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain OrfB_Zn_ribbon PF07282.11 gi|433638028|ref|YP_007283788.1| - 6.3e-22 77.3 0.9 1.7e-21 75.9 0.9 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|433638028|ref|YP_007283788.1| - 3.9e-21 75.5 0.0 1.3e-20 73.8 0.0 1.9 2 0 0 2 2 2 1 Probable transposase C1_2 PF03107.16 gi|433638028|ref|YP_007283788.1| - 0.0071 16.6 0.7 0.023 15.0 0.7 1.9 1 0 0 1 1 1 1 C1 domain A2L_zn_ribbon PF08792.10 gi|433638028|ref|YP_007283788.1| - 0.25 11.1 5.5 0.34 10.7 4.3 1.9 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|433638028|ref|YP_007283788.1| - 0.29 11.2 3.4 0.74 9.8 3.4 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Chorismate_synt PF01264.21 gi|433638029|ref|YP_007283789.1| - 2.1e-118 394.8 0.0 2.4e-118 394.6 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Oxysterol_BP PF01237.18 gi|433638029|ref|YP_007283789.1| - 0.12 11.2 0.1 0.19 10.5 0.1 1.2 1 0 0 1 1 1 0 Oxysterol-binding protein HATPase_c PF02518.26 gi|433638030|ref|YP_007283790.1| - 1.1e-16 61.3 0.0 2.1e-16 60.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA_7TM PF16927.5 gi|433638030|ref|YP_007283790.1| - 8e-16 58.7 13.5 1e-15 58.4 13.5 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HisKA PF00512.25 gi|433638030|ref|YP_007283790.1| - 4.5e-12 45.8 2.0 5.6e-12 45.5 0.9 1.8 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|433638030|ref|YP_007283790.1| - 0.0064 16.7 0.2 0.092 13.0 0.2 2.5 1 1 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|433638030|ref|YP_007283790.1| - 0.019 14.9 0.0 0.051 13.5 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|433638030|ref|YP_007283790.1| - 0.2 11.5 0.0 0.35 10.7 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase POR_N PF01855.19 gi|433638031|ref|YP_007283791.1| - 2e-49 168.4 0.0 3.4e-49 167.7 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|433638031|ref|YP_007283791.1| - 6.7e-47 159.8 0.0 1.5e-46 158.7 0.0 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|433638031|ref|YP_007283791.1| - 4.1e-05 23.8 0.0 8.2e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|433638031|ref|YP_007283791.1| - 0.00048 19.8 0.1 0.0011 18.7 0.1 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|433638031|ref|YP_007283791.1| - 0.076 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 gi|433638032|ref|YP_007283792.1| - 6.5e-31 107.2 0.0 9.6e-31 106.6 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|433638032|ref|YP_007283792.1| - 0.043 14.0 2.7 0.12 12.5 2.7 1.9 1 1 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DUF5531 PF17671.1 gi|433638033|ref|YP_007283793.1| - 0.099 12.5 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) DUF4131 PF13567.6 gi|433638033|ref|YP_007283793.1| - 0.75 9.4 4.3 3.7 7.2 4.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) HTH_24 PF13412.6 gi|433638034|ref|YP_007283794.1| - 2.3e-11 43.1 0.0 4.7e-11 42.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|433638034|ref|YP_007283794.1| - 4.1e-11 42.7 0.0 6.4e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|433638034|ref|YP_007283794.1| - 2.8e-07 30.3 0.0 4.8e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|433638034|ref|YP_007283794.1| - 5.9e-07 29.3 0.0 1.3e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 gi|433638034|ref|YP_007283794.1| - 2e-05 24.2 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_20 PF12840.7 gi|433638034|ref|YP_007283794.1| - 2.1e-05 24.5 0.0 4.4e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|433638034|ref|YP_007283794.1| - 2.8e-05 23.8 0.0 5.4e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|433638034|ref|YP_007283794.1| - 4.4e-05 23.2 0.0 8.5e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|433638034|ref|YP_007283794.1| - 4.4e-05 23.3 0.0 7.4e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|433638034|ref|YP_007283794.1| - 5.1e-05 23.1 0.0 0.0003 20.6 0.0 2.2 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|433638034|ref|YP_007283794.1| - 6.5e-05 23.0 0.7 0.00016 21.8 0.1 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|433638034|ref|YP_007283794.1| - 0.00093 18.8 0.1 0.0022 17.6 0.0 1.6 2 0 0 2 2 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|433638034|ref|YP_007283794.1| - 0.0011 18.9 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 MarR family FaeA PF04703.12 gi|433638034|ref|YP_007283794.1| - 0.0011 19.3 0.0 0.0018 18.6 0.0 1.3 1 0 0 1 1 1 1 FaeA-like protein Rrf2 PF02082.20 gi|433638034|ref|YP_007283794.1| - 0.0016 18.8 0.0 0.004 17.5 0.0 1.6 2 0 0 2 2 1 1 Transcriptional regulator HTH_29 PF13551.6 gi|433638034|ref|YP_007283794.1| - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_47 PF16221.5 gi|433638034|ref|YP_007283794.1| - 0.0021 17.6 0.1 0.0071 15.9 0.0 1.8 2 0 0 2 2 2 1 winged helix-turn-helix MarR_2 PF12802.7 gi|433638034|ref|YP_007283794.1| - 0.0034 17.2 0.0 0.0083 16.0 0.0 1.6 2 0 0 2 2 1 1 MarR family TrmB PF01978.19 gi|433638034|ref|YP_007283794.1| - 0.0042 16.9 0.1 0.011 15.6 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|433638034|ref|YP_007283794.1| - 0.0056 17.1 0.1 1.5 9.3 0.0 2.2 1 1 1 2 2 2 1 Winged helix DNA-binding domain LacI PF00356.21 gi|433638034|ref|YP_007283794.1| - 0.01 15.6 0.0 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_Crp_2 PF13545.6 gi|433638034|ref|YP_007283794.1| - 0.013 15.5 0.0 0.028 14.4 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|433638034|ref|YP_007283794.1| - 0.013 15.6 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|433638034|ref|YP_007283794.1| - 0.016 15.0 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|433638034|ref|YP_007283794.1| - 0.028 14.1 0.0 0.055 13.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_45 PF14947.6 gi|433638034|ref|YP_007283794.1| - 0.055 13.5 0.0 0.12 12.4 0.0 1.6 1 1 1 2 2 2 0 Winged helix-turn-helix RPA_C PF08784.11 gi|433638034|ref|YP_007283794.1| - 0.056 14.1 0.0 0.11 13.2 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HTH_Tnp_ISL3 PF13542.6 gi|433638034|ref|YP_007283794.1| - 0.09 12.2 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_6 PF01418.17 gi|433638034|ref|YP_007283794.1| - 0.091 12.8 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family Methyltransf_14 PF08484.11 gi|433638034|ref|YP_007283794.1| - 0.16 11.7 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 C-methyltransferase C-terminal domain TetR_N PF00440.23 gi|433638034|ref|YP_007283794.1| - 0.16 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family NosL PF05573.12 gi|433638035|ref|YP_007283795.1| - 1.5e-12 48.0 0.0 1.9e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 NosL EamA PF00892.20 gi|433638036|ref|YP_007283796.1| - 9.5e-31 106.8 32.1 7.7e-16 58.5 13.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|433638036|ref|YP_007283796.1| - 0.024 14.0 6.9 0.12 11.7 6.9 1.9 1 1 0 1 1 1 0 Triose-phosphate Transporter family HKR_ArcB_TM PF18415.1 gi|433638036|ref|YP_007283796.1| - 4.5 8.1 9.0 0.52 11.1 1.6 3.0 3 0 0 3 3 3 0 Histidine kinase receptor ArcB trans-membrane domain DUF4157 PF13699.6 gi|433638037|ref|YP_007283797.1| - 2.4e-30 104.6 0.7 6e-30 103.3 0.7 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) TraT PF05818.12 gi|433638037|ref|YP_007283797.1| - 0.074 12.7 0.6 0.14 11.8 0.6 1.4 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Pept_S41_N PF18294.1 gi|433638038|ref|YP_007283798.1| - 0.11 12.5 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Peptidase S41 N-terminal domain HTH_20 PF12840.7 gi|433638039|ref|YP_007283799.1| - 8.2e-06 25.8 0.0 1.2e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|433638039|ref|YP_007283799.1| - 5.7e-05 22.9 0.0 8.4e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|433638039|ref|YP_007283799.1| - 0.0042 16.6 0.0 0.0084 15.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RP-C PF03428.13 gi|433638039|ref|YP_007283799.1| - 0.0075 15.9 0.0 0.0088 15.7 0.0 1.2 1 0 0 1 1 1 1 Replication protein C N-terminal domain MarR_2 PF12802.7 gi|433638039|ref|YP_007283799.1| - 0.0086 15.9 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433638039|ref|YP_007283799.1| - 0.016 15.0 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain PadR PF03551.14 gi|433638039|ref|YP_007283799.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2250 PF10007.9 gi|433638039|ref|YP_007283799.1| - 0.075 13.2 0.0 0.18 12.0 0.0 1.6 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) DUF1358 PF07096.11 gi|433638040|ref|YP_007283800.1| - 0.019 14.9 0.1 0.021 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) NAD_kinase PF01513.21 gi|433638041|ref|YP_007283801.1| - 1.8e-43 148.8 0.2 2.2e-43 148.5 0.2 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|433638041|ref|YP_007283801.1| - 8.3e-07 28.7 0.1 3.1e-06 26.8 0.1 2.0 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain OrfB_Zn_ribbon PF07282.11 gi|433638042|ref|YP_007283802.1| - 1.3e-22 79.5 2.2 2.5e-22 78.6 2.2 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|433638042|ref|YP_007283802.1| - 1.7e-18 67.0 0.0 3.5e-18 66.0 0.0 1.5 1 0 0 1 1 1 1 Probable transposase C1_2 PF03107.16 gi|433638042|ref|YP_007283802.1| - 0.0056 17.0 1.8 0.015 15.6 1.8 1.7 1 0 0 1 1 1 1 C1 domain Ribosomal_L37ae PF01780.19 gi|433638042|ref|YP_007283802.1| - 0.082 13.0 0.8 0.21 11.7 0.8 1.6 1 0 0 1 1 1 0 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|433638042|ref|YP_007283802.1| - 0.16 11.9 3.8 0.38 10.7 3.8 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF3791 PF12668.7 gi|433638042|ref|YP_007283802.1| - 0.37 10.9 1.3 0.45 10.6 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) PhoU PF01895.19 gi|433638043|ref|YP_007283803.1| - 8.9e-15 54.9 4.3 1.3e-12 48.0 0.1 2.7 2 1 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|433638043|ref|YP_007283803.1| - 3.9e-05 23.5 0.0 8.4e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Phage_holin_3_6 PF07332.11 gi|433638044|ref|YP_007283804.1| - 0.49 10.4 9.2 0.47 10.5 9.2 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3040 PF11239.8 gi|433638044|ref|YP_007283804.1| - 0.59 10.4 5.3 0.68 10.2 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF347 PF03988.12 gi|433638044|ref|YP_007283804.1| - 3.2 8.0 8.2 1.4 9.2 1.1 2.1 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) HTH_AsnC-type PF13404.6 gi|433638045|ref|YP_007283805.1| - 0.0043 16.8 0.3 0.057 13.2 0.3 2.2 1 1 0 1 1 1 1 AsnC-type helix-turn-helix domain Put_DNA-bind_N PF06971.13 gi|433638045|ref|YP_007283805.1| - 0.0091 16.0 0.1 0.016 15.2 0.1 1.4 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus HTH_36 PF13730.6 gi|433638045|ref|YP_007283805.1| - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|433638045|ref|YP_007283805.1| - 0.013 15.9 0.1 0.017 15.5 0.1 1.2 1 0 0 1 1 1 0 FaeA-like protein HTH_24 PF13412.6 gi|433638045|ref|YP_007283805.1| - 0.081 12.5 0.3 1.2 8.8 0.3 2.2 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding Polyketide_cyc2 PF10604.9 gi|433638046|ref|YP_007283806.1| - 1.2e-12 48.3 0.8 1.4e-12 48.1 0.8 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport COXG PF06240.13 gi|433638046|ref|YP_007283806.1| - 0.055 13.2 0.0 0.062 13.0 0.0 1.2 1 1 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) CN_hydrolase PF00795.22 gi|433638047|ref|YP_007283807.1| - 6.9e-46 156.7 0.0 7.7e-46 156.5 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF3875 PF12991.7 gi|433638047|ref|YP_007283807.1| - 0.066 13.2 0.1 17 5.5 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3875) Aldedh PF00171.22 gi|433638048|ref|YP_007283808.1| - 4.3e-143 477.2 0.0 5.3e-143 476.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family OmdA PF13376.6 gi|433638048|ref|YP_007283808.1| - 0.04 13.9 0.6 0.094 12.7 0.6 1.5 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated LuxC PF05893.14 gi|433638048|ref|YP_007283808.1| - 0.14 11.2 0.0 0.25 10.4 0.0 1.4 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) RIO1 PF01163.22 gi|433638049|ref|YP_007283809.1| - 6.8e-09 35.6 0.0 1e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|433638049|ref|YP_007283809.1| - 1.1e-08 35.3 0.0 0.001 19.0 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|433638049|ref|YP_007283809.1| - 2.7e-06 26.9 0.0 3.6e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|433638049|ref|YP_007283809.1| - 0.00018 20.9 0.0 0.0003 20.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family WaaY PF06176.11 gi|433638049|ref|YP_007283809.1| - 0.0071 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Kinase-PolyVal PF18762.1 gi|433638049|ref|YP_007283809.1| - 0.16 11.9 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins HicA_toxin PF07927.12 gi|433638050|ref|YP_007283810.1| - 3.4e-13 49.4 0.0 4.1e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, Acyl-CoA_dh_1 PF00441.24 gi|433638053|ref|YP_007283813.1| - 1.7e-48 164.6 0.2 2.4e-48 164.1 0.2 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433638053|ref|YP_007283813.1| - 5.7e-37 126.8 0.3 1.4e-36 125.6 0.1 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433638053|ref|YP_007283813.1| - 4e-24 84.6 0.1 6.4e-24 84.0 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|433638053|ref|YP_007283813.1| - 1.3e-16 61.1 0.6 1.9e-16 60.5 0.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain ELFV_dehydrog PF00208.21 gi|433638054|ref|YP_007283814.1| - 7e-68 229.0 0.1 8.4e-68 228.7 0.1 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|433638054|ref|YP_007283814.1| - 1.9e-52 176.6 0.0 2.9e-52 176.0 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|433638054|ref|YP_007283814.1| - 0.027 13.9 0.0 0.059 12.7 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Oxidored_nitro PF00148.19 gi|433638054|ref|YP_007283814.1| - 0.15 10.8 0.0 0.2 10.4 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase HpcH_HpaI PF03328.14 gi|433638055|ref|YP_007283815.1| - 1.4e-58 197.7 2.0 1.8e-58 197.3 2.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|433638055|ref|YP_007283815.1| - 2e-11 43.7 0.0 3e-06 26.6 0.1 2.1 1 1 1 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold MaoC_dehydratas PF01575.19 gi|433638056|ref|YP_007283816.1| - 8e-26 90.0 0.1 1.1e-25 89.6 0.1 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|433638056|ref|YP_007283816.1| - 7.8e-08 32.5 0.5 1.9e-07 31.3 0.5 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase DUF3931 PF13082.6 gi|433638056|ref|YP_007283816.1| - 0.08 13.1 0.1 0.18 12.0 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3931) HTH_24 PF13412.6 gi|433638057|ref|YP_007283817.1| - 5.9e-11 41.8 0.0 1.2e-10 40.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433638057|ref|YP_007283817.1| - 7.8e-10 38.5 0.2 2e-09 37.2 0.2 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|433638057|ref|YP_007283817.1| - 2.8e-08 33.6 0.0 6.3e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|433638057|ref|YP_007283817.1| - 6.2e-07 29.8 0.7 1.4e-05 25.5 0.1 2.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|433638057|ref|YP_007283817.1| - 1.1e-06 28.4 0.1 2.6e-06 27.3 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|433638057|ref|YP_007283817.1| - 1.3e-05 24.9 0.0 2.1e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|433638057|ref|YP_007283817.1| - 2.5e-05 24.2 0.0 4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_IclR PF09339.10 gi|433638057|ref|YP_007283817.1| - 4.4e-05 23.2 0.0 0.00011 22.0 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|433638057|ref|YP_007283817.1| - 4.6e-05 23.3 0.1 7.7e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|433638057|ref|YP_007283817.1| - 0.00011 22.1 0.2 0.00021 21.1 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|433638057|ref|YP_007283817.1| - 0.00021 21.3 0.1 0.00048 20.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|433638057|ref|YP_007283817.1| - 0.00048 19.8 0.1 0.001 18.8 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain Rrf2 PF02082.20 gi|433638057|ref|YP_007283817.1| - 0.00075 19.8 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|433638057|ref|YP_007283817.1| - 0.0016 18.6 0.1 0.0044 17.2 0.1 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|433638057|ref|YP_007283817.1| - 0.0032 17.2 0.0 0.0043 16.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) Mnd1 PF03962.15 gi|433638057|ref|YP_007283817.1| - 0.0037 17.5 0.0 0.0071 16.6 0.0 1.4 1 0 0 1 1 1 1 Mnd1 HTH domain HTH_13 PF11972.8 gi|433638057|ref|YP_007283817.1| - 0.0081 16.2 0.1 0.02 14.9 0.1 1.7 1 0 0 1 1 1 1 HTH DNA binding domain HTH_12 PF08461.10 gi|433638057|ref|YP_007283817.1| - 0.011 15.6 0.1 0.042 13.8 0.0 2.1 2 1 0 2 2 1 0 Ribonuclease R winged-helix domain HTH_AsnC-type PF13404.6 gi|433638057|ref|YP_007283817.1| - 0.015 15.1 0.1 0.035 13.9 0.1 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain GntR PF00392.21 gi|433638057|ref|YP_007283817.1| - 0.017 14.8 0.6 0.038 13.6 0.6 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family SMC_ScpB PF04079.16 gi|433638057|ref|YP_007283817.1| - 0.021 14.5 0.1 0.034 13.8 0.1 1.3 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB Mrr_N PF14338.6 gi|433638057|ref|YP_007283817.1| - 0.026 14.7 0.0 0.25 11.5 0.0 2.1 1 1 1 2 2 2 0 Mrr N-terminal domain LexA_DNA_bind PF01726.16 gi|433638057|ref|YP_007283817.1| - 0.027 14.3 0.1 0.25 11.1 0.0 2.3 2 0 0 2 2 2 0 LexA DNA binding domain NMD3 PF04981.13 gi|433638057|ref|YP_007283817.1| - 0.028 13.9 0.0 0.042 13.3 0.0 1.2 1 0 0 1 1 1 0 NMD3 family Adeno_E4 PF05385.11 gi|433638057|ref|YP_007283817.1| - 0.033 14.3 0.1 0.076 13.1 0.1 1.6 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein DUF4364 PF14277.6 gi|433638057|ref|YP_007283817.1| - 0.045 13.5 0.0 0.078 12.7 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) HTH_CodY PF08222.11 gi|433638057|ref|YP_007283817.1| - 0.049 13.2 1.1 0.23 11.0 0.0 2.4 3 0 0 3 3 2 0 CodY helix-turn-helix domain Rio2_N PF09202.11 gi|433638057|ref|YP_007283817.1| - 0.054 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Rio2, N-terminal HTH_3 PF01381.22 gi|433638057|ref|YP_007283817.1| - 0.064 13.3 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix FaeA PF04703.12 gi|433638057|ref|YP_007283817.1| - 0.067 13.6 0.4 0.19 12.1 0.1 1.9 2 0 0 2 2 1 0 FaeA-like protein Nitro_FeMo-Co PF02579.17 gi|433638057|ref|YP_007283817.1| - 0.085 13.2 0.6 0.23 11.8 0.6 1.8 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor HTH_10 PF04967.12 gi|433638057|ref|YP_007283817.1| - 0.11 12.4 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_28 PF13518.6 gi|433638057|ref|YP_007283817.1| - 0.14 12.3 0.1 0.31 11.2 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.6 gi|433638057|ref|YP_007283817.1| - 0.18 12.0 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain PAC2 PF09754.9 gi|433638058|ref|YP_007283818.1| - 2.1e-50 171.7 0.1 2.5e-50 171.5 0.1 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.12 gi|433638059|ref|YP_007283819.1| - 6.6e-21 74.1 1.3 7.4e-21 73.9 1.3 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Zn-ribbon_8 PF09723.10 gi|433638059|ref|YP_007283819.1| - 0.082 13.0 0.2 0.13 12.4 0.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain EIF_2_alpha PF07541.12 gi|433638060|ref|YP_007283820.1| - 1.5e-20 73.4 0.0 2.5e-20 72.7 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|433638060|ref|YP_007283820.1| - 4e-10 39.9 0.8 9.2e-10 38.7 0.8 1.6 1 0 0 1 1 1 1 S1 RNA binding domain Ribosomal_S27e PF01667.17 gi|433638061|ref|YP_007283821.1| - 2.7e-21 75.0 0.3 2.8e-21 75.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 Zn-ribbon_8 PF09723.10 gi|433638061|ref|YP_007283821.1| - 0.00045 20.3 0.8 0.00062 19.8 0.8 1.2 1 0 0 1 1 1 1 Zinc ribbon domain Zn_Tnp_IS91 PF14319.6 gi|433638061|ref|YP_007283821.1| - 0.048 13.7 0.2 0.057 13.5 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain HypA PF01155.19 gi|433638061|ref|YP_007283821.1| - 0.051 13.6 0.4 0.06 13.4 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|433638061|ref|YP_007283821.1| - 0.06 12.9 1.3 0.06 12.9 1.3 1.5 2 0 0 2 2 2 0 TFIIB zinc-binding Ribosomal_L44 PF00935.19 gi|433638062|ref|YP_007283822.1| - 4.6e-22 78.3 5.7 5.6e-22 78.0 5.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 zf-ribbon_3 PF13248.6 gi|433638062|ref|YP_007283822.1| - 0.00061 19.1 0.6 0.87 9.1 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433638062|ref|YP_007283822.1| - 0.021 14.9 2.2 5 7.3 0.3 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|433638062|ref|YP_007283822.1| - 0.03 14.2 6.9 0.26 11.2 0.1 2.5 3 0 0 3 3 3 0 SprT-like zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|433638062|ref|YP_007283822.1| - 0.039 13.7 1.5 1.5 8.6 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Terminase_GpA PF05876.12 gi|433638062|ref|YP_007283822.1| - 0.11 11.1 1.8 0.22 10.0 1.7 1.6 1 1 0 1 1 1 0 Phage terminase large subunit (GpA) zf-LITAF-like PF10601.9 gi|433638062|ref|YP_007283822.1| - 0.12 12.6 2.8 1 9.7 0.2 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zinc_ribbon_12 PF11331.8 gi|433638062|ref|YP_007283822.1| - 0.23 11.3 1.4 0.69 9.8 0.2 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain zf-Mss51 PF13824.6 gi|433638062|ref|YP_007283822.1| - 3.8 7.7 8.9 6.7 6.9 8.9 1.5 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 SBP_bac_5 PF00496.22 gi|433638064|ref|YP_007283824.1| - 3.1e-45 154.8 1.7 4.1e-45 154.4 1.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 gi|433638065|ref|YP_007283825.1| - 1.2e-30 106.7 13.2 1.2e-30 106.7 13.2 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|433638066|ref|YP_007283826.1| - 5.1e-29 101.3 12.5 5.1e-29 101.3 12.5 2.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|433638066|ref|YP_007283826.1| - 8.3e-09 35.3 0.1 8.3e-09 35.3 0.1 4.5 4 2 1 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|433638067|ref|YP_007283827.1| - 1e-24 87.6 0.0 1.4e-24 87.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433638067|ref|YP_007283827.1| - 7.1e-18 64.9 0.0 1.7e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|433638067|ref|YP_007283827.1| - 9.7e-07 28.4 0.0 1.5e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|433638067|ref|YP_007283827.1| - 2.2e-05 24.5 0.0 0.00039 20.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|433638067|ref|YP_007283827.1| - 0.0014 18.9 1.4 0.11 12.8 1.4 2.9 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|433638067|ref|YP_007283827.1| - 0.0078 16.6 0.1 0.014 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 gi|433638067|ref|YP_007283827.1| - 0.049 13.2 0.0 0.077 12.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_29 PF13555.6 gi|433638067|ref|YP_007283827.1| - 0.076 12.8 0.1 0.16 11.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|433638067|ref|YP_007283827.1| - 0.14 12.2 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|433638067|ref|YP_007283827.1| - 0.14 11.8 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 gi|433638067|ref|YP_007283827.1| - 0.17 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Myosin_head PF00063.21 gi|433638067|ref|YP_007283827.1| - 0.17 10.0 0.0 0.25 9.5 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) IstB_IS21 PF01695.17 gi|433638067|ref|YP_007283827.1| - 0.19 11.4 0.1 0.76 9.5 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|433638067|ref|YP_007283827.1| - 0.2 11.4 0.2 1.1 8.9 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|433638068|ref|YP_007283828.1| - 8.9e-31 107.2 0.0 1.1e-29 103.7 0.0 2.3 2 1 0 2 2 2 1 ABC transporter oligo_HPY PF08352.12 gi|433638068|ref|YP_007283828.1| - 6.2e-18 65.1 0.2 1.5e-17 63.8 0.2 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433638068|ref|YP_007283828.1| - 5.7e-05 23.1 3.2 0.0005 20.0 0.3 2.5 2 1 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|433638068|ref|YP_007283828.1| - 0.00058 20.1 0.1 0.004 17.4 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433638068|ref|YP_007283828.1| - 0.0018 18.7 1.0 0.056 13.8 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain ATP-synt_ab PF00006.25 gi|433638068|ref|YP_007283828.1| - 0.0041 16.8 0.0 0.0042 16.8 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_29 PF13555.6 gi|433638068|ref|YP_007283828.1| - 0.057 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|433638068|ref|YP_007283828.1| - 0.1 12.5 0.0 0.32 10.9 0.0 1.8 1 0 0 1 1 1 0 NACHT domain RsgA_GTPase PF03193.16 gi|433638068|ref|YP_007283828.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 gi|433638068|ref|YP_007283828.1| - 0.21 11.5 0.2 0.48 10.3 0.0 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 gi|433638068|ref|YP_007283828.1| - 0.24 11.8 0.0 0.42 11.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Pribosyltran PF00156.27 gi|433638069|ref|YP_007283829.1| - 6.3e-17 61.5 2.9 8.3e-17 61.2 2.9 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|433638069|ref|YP_007283829.1| - 2e-05 24.1 0.5 2.2e-05 24.0 0.5 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|433638069|ref|YP_007283829.1| - 0.082 12.4 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase DFP PF04127.15 gi|433638071|ref|YP_007283831.1| - 1.8e-47 161.6 5.4 2.2e-46 158.0 0.6 2.6 3 0 0 3 3 3 2 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|433638071|ref|YP_007283831.1| - 2.7e-33 115.0 0.6 4.6e-33 114.2 0.6 1.4 1 0 0 1 1 1 1 Flavoprotein adh_short_C2 PF13561.6 gi|433638071|ref|YP_007283831.1| - 0.00058 19.5 0.7 0.0015 18.1 0.1 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase OKR_DC_1_N PF03709.15 gi|433638071|ref|YP_007283831.1| - 0.14 12.5 0.2 0.54 10.6 0.1 2.0 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain Epimerase PF01370.21 gi|433638072|ref|YP_007283832.1| - 3.7e-21 75.7 0.0 4.6e-21 75.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433638072|ref|YP_007283832.1| - 1.3e-09 37.9 0.0 5.9e-09 35.8 0.0 2.1 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|433638072|ref|YP_007283832.1| - 3.7e-08 32.7 0.5 9.7e-08 31.3 0.5 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|433638072|ref|YP_007283832.1| - 2e-07 31.1 0.2 4.6e-07 29.9 0.2 1.6 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|433638072|ref|YP_007283832.1| - 5.5e-07 29.0 0.0 3.5e-06 26.4 0.0 1.9 1 1 1 2 2 2 1 Male sterility protein RmlD_sub_bind PF04321.17 gi|433638072|ref|YP_007283832.1| - 9.6e-07 28.2 0.1 2.1e-06 27.1 0.1 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|433638072|ref|YP_007283832.1| - 1.1e-06 28.0 0.6 1.2e-05 24.6 0.1 2.3 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Semialdhyde_dh PF01118.24 gi|433638072|ref|YP_007283832.1| - 0.027 14.9 1.1 0.16 12.4 1.1 2.2 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain KR PF08659.10 gi|433638072|ref|YP_007283832.1| - 0.15 12.0 3.0 11 5.9 0.4 2.9 1 1 1 2 2 2 0 KR domain Pyr_redox_2 PF07992.14 gi|433638073|ref|YP_007283833.1| - 7.5e-08 31.9 5.3 0.00047 19.5 1.2 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433638073|ref|YP_007283833.1| - 1.3e-05 24.5 1.9 1.3e-05 24.5 1.9 2.4 3 0 0 3 3 3 1 FAD binding domain GIDA PF01134.22 gi|433638073|ref|YP_007283833.1| - 0.0045 16.1 0.3 0.0045 16.1 0.3 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|433638073|ref|YP_007283833.1| - 0.01 16.0 0.2 0.025 14.8 0.2 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|433638073|ref|YP_007283833.1| - 0.012 15.1 1.9 0.022 14.1 1.9 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase DAO PF01266.24 gi|433638073|ref|YP_007283833.1| - 0.018 14.6 10.1 0.03 13.9 1.9 2.4 1 1 1 2 2 2 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|433638073|ref|YP_007283833.1| - 0.054 12.7 0.1 0.11 11.7 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|433638073|ref|YP_007283833.1| - 0.12 11.6 0.8 0.22 10.8 0.3 1.7 2 0 0 2 2 2 0 Thi4 family Trp_halogenase PF04820.14 gi|433638073|ref|YP_007283833.1| - 0.22 10.3 1.2 0.88 8.3 0.0 2.0 2 0 0 2 2 2 0 Tryptophan halogenase HI0933_like PF03486.14 gi|433638073|ref|YP_007283833.1| - 0.26 10.0 0.2 0.38 9.4 0.2 1.2 1 0 0 1 1 1 0 HI0933-like protein Polyketide_cyc2 PF10604.9 gi|433638074|ref|YP_007283834.1| - 7.8e-11 42.4 1.3 9.4e-11 42.2 1.3 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|433638074|ref|YP_007283834.1| - 0.00054 20.2 0.2 0.0013 18.9 0.1 1.7 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Copper-bind PF00127.20 gi|433638075|ref|YP_007283835.1| - 0.00019 21.8 0.0 0.00047 20.6 0.0 1.6 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family UVR PF02151.19 gi|433638075|ref|YP_007283835.1| - 0.097 12.4 2.9 0.19 11.6 2.9 1.5 1 0 0 1 1 1 0 UvrB/uvrC motif Big_2 PF02368.18 gi|433638075|ref|YP_007283835.1| - 1.5 8.8 4.4 1.7 8.6 1.6 2.2 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 2) Peptidase_M42 PF05343.14 gi|433638076|ref|YP_007283836.1| - 1.1e-88 297.1 1.8 1.3e-88 296.9 1.8 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|433638076|ref|YP_007283836.1| - 3.1e-07 30.3 0.3 5.8e-07 29.4 0.3 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|433638076|ref|YP_007283836.1| - 5.6e-06 26.2 4.6 0.00098 18.9 0.1 2.5 3 0 0 3 3 3 2 Peptidase family M28 Peptidase_M18 PF02127.15 gi|433638076|ref|YP_007283836.1| - 6.6e-06 25.2 0.2 0.01 14.7 0.0 2.1 1 1 0 2 2 2 2 Aminopeptidase I zinc metalloprotease (M18) TerC PF03741.16 gi|433638078|ref|YP_007283838.1| - 0.02 14.5 0.0 0.025 14.3 0.0 1.3 1 0 0 1 1 1 0 Integral membrane protein TerC family Ac110_PIF PF07280.11 gi|433638078|ref|YP_007283838.1| - 8.4 6.3 6.1 17 5.3 6.1 1.5 1 0 0 1 1 1 0 Per os infectivity factor AC110 ABC_tran PF00005.27 gi|433638079|ref|YP_007283839.1| - 9.3e-34 116.9 0.0 1.7e-33 116.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433638079|ref|YP_007283839.1| - 3.8e-15 56.2 0.3 9.6e-15 54.9 0.3 1.7 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433638079|ref|YP_007283839.1| - 6.1e-06 26.3 0.8 0.0045 16.8 0.2 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433638079|ref|YP_007283839.1| - 8.1e-05 22.2 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|433638079|ref|YP_007283839.1| - 0.00034 20.9 0.6 0.0018 18.6 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433638079|ref|YP_007283839.1| - 0.012 16.0 1.0 0.028 14.8 0.3 2.0 2 1 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.25 gi|433638079|ref|YP_007283839.1| - 0.013 15.1 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|433638079|ref|YP_007283839.1| - 0.014 15.3 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 gi|433638079|ref|YP_007283839.1| - 0.049 13.6 0.0 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 gi|433638079|ref|YP_007283839.1| - 0.056 13.5 0.0 0.13 12.3 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase MobB PF03205.14 gi|433638079|ref|YP_007283839.1| - 0.081 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|433638079|ref|YP_007283839.1| - 0.1 13.1 0.0 0.41 11.1 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|433638079|ref|YP_007283839.1| - 0.1 12.2 0.1 11 5.5 0.1 2.4 2 0 0 2 2 2 0 AAA domain PAS_7 PF12860.7 gi|433638079|ref|YP_007283839.1| - 0.11 12.6 0.1 0.48 10.6 0.0 1.9 2 0 0 2 2 2 0 PAS fold AAA_13 PF13166.6 gi|433638079|ref|YP_007283839.1| - 0.12 11.0 0.2 4.3 5.9 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|433638079|ref|YP_007283839.1| - 0.17 11.7 0.2 0.33 10.7 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|433638079|ref|YP_007283839.1| - 0.32 10.7 0.7 1.1 9.1 0.4 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.27 gi|433638080|ref|YP_007283840.1| - 4.4e-27 95.3 0.0 1.4e-15 58.0 0.0 2.3 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|433638080|ref|YP_007283840.1| - 2.9e-17 62.9 0.2 5.9e-17 61.9 0.2 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433638080|ref|YP_007283840.1| - 5.1e-07 29.8 0.0 4e-06 26.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433638080|ref|YP_007283840.1| - 0.00048 19.6 0.2 0.13 11.7 0.0 2.4 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|433638080|ref|YP_007283840.1| - 0.0033 17.7 0.7 0.96 9.7 0.2 2.4 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|433638080|ref|YP_007283840.1| - 0.02 14.6 0.0 0.046 13.5 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Sigma54_activat PF00158.26 gi|433638080|ref|YP_007283840.1| - 0.04 13.6 0.2 0.83 9.3 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_16 PF13191.6 gi|433638080|ref|YP_007283840.1| - 0.041 14.3 0.0 0.11 12.9 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.17 gi|433638080|ref|YP_007283840.1| - 0.093 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain TniB PF05621.11 gi|433638080|ref|YP_007283840.1| - 0.2 11.0 0.5 0.88 8.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein BPD_transp_1 PF00528.22 gi|433638081|ref|YP_007283841.1| - 1.1e-20 74.2 5.8 1.1e-20 74.2 5.8 3.1 2 2 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|433638081|ref|YP_007283841.1| - 2.4e-06 27.4 0.0 2.4e-06 27.4 0.0 6.3 8 1 0 8 8 8 1 N-terminal TM domain of oligopeptide transport permease C DUF4131 PF13567.6 gi|433638081|ref|YP_007283841.1| - 0.055 13.1 0.1 0.055 13.1 0.1 4.4 4 2 1 5 5 5 0 Domain of unknown function (DUF4131) DUF1317 PF07026.11 gi|433638081|ref|YP_007283841.1| - 0.36 10.7 1.1 3.6 7.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1317) BPD_transp_1 PF00528.22 gi|433638082|ref|YP_007283842.1| - 2e-37 128.8 11.2 2e-37 128.8 11.2 2.2 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2157 PF09925.9 gi|433638082|ref|YP_007283842.1| - 0.17 11.7 8.6 1 9.1 0.3 3.3 2 1 1 3 3 3 0 Predicted membrane protein (DUF2157) SBP_bac_5 PF00496.22 gi|433638083|ref|YP_007283843.1| - 7.9e-66 222.5 0.9 1.2e-65 222.0 0.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Thiolase_N PF00108.23 gi|433638084|ref|YP_007283844.1| - 1.1e-27 97.1 0.4 1.9e-27 96.3 0.4 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|433638084|ref|YP_007283844.1| - 2.9e-11 43.4 8.7 1.6e-10 41.0 3.5 3.2 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_C PF02803.18 gi|433638084|ref|YP_007283844.1| - 1e-09 38.1 1.5 1.8e-09 37.3 0.2 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain Ketoacyl-synt_C PF02801.22 gi|433638084|ref|YP_007283844.1| - 0.27 11.3 3.7 1.4 9.0 0.2 3.2 3 1 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain OB_aCoA_assoc PF01796.17 gi|433638085|ref|YP_007283845.1| - 3.3e-13 49.4 0.9 4.5e-13 49.0 0.9 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|433638085|ref|YP_007283845.1| - 4.8e-05 23.1 1.5 9.6e-05 22.2 1.5 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|433638085|ref|YP_007283845.1| - 0.19 11.9 0.8 0.33 11.1 0.8 1.4 1 0 0 1 1 1 0 Zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|433638085|ref|YP_007283845.1| - 0.2 11.8 0.0 0.29 11.3 0.0 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like MeaB PF03308.16 gi|433638086|ref|YP_007283846.1| - 1.1e-90 303.2 3.1 1.4e-90 303.0 3.1 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|433638086|ref|YP_007283846.1| - 3.8e-06 26.6 1.8 4.4e-05 23.1 1.8 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 gi|433638086|ref|YP_007283846.1| - 3.8e-06 26.9 0.0 7e-05 22.7 0.0 2.3 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|433638086|ref|YP_007283846.1| - 3.7e-05 23.4 0.3 0.0001 22.0 0.3 1.7 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain GTP_EFTU PF00009.27 gi|433638086|ref|YP_007283846.1| - 7.7e-05 22.3 0.0 0.15 11.6 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 gi|433638086|ref|YP_007283846.1| - 0.0002 21.3 0.1 0.00043 20.2 0.1 1.5 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|433638086|ref|YP_007283846.1| - 0.00023 20.9 0.0 0.00051 19.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433638086|ref|YP_007283846.1| - 0.00083 19.8 0.4 0.0046 17.4 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|433638086|ref|YP_007283846.1| - 0.0012 19.1 0.0 0.0033 17.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|433638086|ref|YP_007283846.1| - 0.0024 18.4 0.3 0.014 16.0 0.1 2.3 3 0 0 3 3 2 1 AAA domain ABC_tran PF00005.27 gi|433638086|ref|YP_007283846.1| - 0.0029 18.1 0.1 0.0051 17.3 0.1 1.4 1 0 0 1 1 1 1 ABC transporter Zeta_toxin PF06414.12 gi|433638086|ref|YP_007283846.1| - 0.0049 16.2 0.0 0.0089 15.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_29 PF13555.6 gi|433638086|ref|YP_007283846.1| - 0.0085 15.8 0.2 0.021 14.5 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain KAP_NTPase PF07693.14 gi|433638086|ref|YP_007283846.1| - 0.01 15.1 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 0 KAP family P-loop domain MobB PF03205.14 gi|433638086|ref|YP_007283846.1| - 0.016 15.1 0.0 0.065 13.1 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.18 gi|433638086|ref|YP_007283846.1| - 0.023 14.4 0.1 0.058 13.1 0.1 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family KTI12 PF08433.10 gi|433638086|ref|YP_007283846.1| - 0.027 13.9 0.0 0.05 13.1 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_17 PF13207.6 gi|433638086|ref|YP_007283846.1| - 0.035 14.5 0.5 0.089 13.2 0.1 1.9 2 0 0 2 2 1 0 AAA domain AAA_28 PF13521.6 gi|433638086|ref|YP_007283846.1| - 0.037 14.3 0.2 0.037 14.3 0.2 2.0 2 0 0 2 2 2 0 AAA domain ParA PF10609.9 gi|433638086|ref|YP_007283846.1| - 0.038 13.4 1.6 0.4 10.1 0.1 2.1 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase MMR_HSR1 PF01926.23 gi|433638086|ref|YP_007283846.1| - 0.039 14.0 0.1 0.078 13.1 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 gi|433638086|ref|YP_007283846.1| - 0.041 12.8 0.0 0.08 11.8 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.23 gi|433638086|ref|YP_007283846.1| - 0.042 13.9 0.0 0.063 13.3 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RsgA_GTPase PF03193.16 gi|433638086|ref|YP_007283846.1| - 0.043 13.7 0.1 0.11 12.3 0.0 1.9 2 0 0 2 2 1 0 RsgA GTPase NACHT PF05729.12 gi|433638086|ref|YP_007283846.1| - 0.052 13.5 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain Ploopntkinase3 PF18751.1 gi|433638086|ref|YP_007283846.1| - 0.06 13.3 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_33 PF13671.6 gi|433638086|ref|YP_007283846.1| - 0.07 13.3 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|433638086|ref|YP_007283846.1| - 0.076 13.3 0.5 0.21 11.9 0.2 1.8 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|433638086|ref|YP_007283846.1| - 0.14 11.9 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NB-ARC PF00931.22 gi|433638086|ref|YP_007283846.1| - 0.14 11.3 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain B12-binding PF02310.19 gi|433638087|ref|YP_007283847.1| - 9.2e-23 80.6 1.2 1.1e-22 80.4 1.2 1.0 1 0 0 1 1 1 1 B12 binding domain BcrAD_BadFG PF01869.20 gi|433638087|ref|YP_007283847.1| - 0.045 13.2 0.0 0.096 12.2 0.0 1.4 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family Staph_haemo PF05480.11 gi|433638087|ref|YP_007283847.1| - 0.067 13.0 0.2 0.15 11.9 0.0 1.7 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Nitro_FeMo-Co PF02579.17 gi|433638087|ref|YP_007283847.1| - 0.092 13.1 0.3 2 8.8 0.0 2.3 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor HD PF01966.22 gi|433638088|ref|YP_007283848.1| - 1.4e-14 54.4 0.8 2.2e-14 53.7 0.8 1.3 1 0 0 1 1 1 1 HD domain ThuA PF06283.11 gi|433638088|ref|YP_007283848.1| - 0.052 13.8 0.9 0.098 12.9 0.3 1.7 2 0 0 2 2 2 0 Trehalose utilisation DoxX PF07681.12 gi|433638089|ref|YP_007283849.1| - 2.4e-06 28.1 10.7 2.4e-06 28.1 10.7 2.2 2 1 0 2 2 2 1 DoxX DoxD PF04173.13 gi|433638089|ref|YP_007283849.1| - 0.0094 15.9 4.2 0.017 15.1 4.2 1.4 1 1 0 1 1 1 1 TQO small subunit DoxD Phage_holin_3_6 PF07332.11 gi|433638089|ref|YP_007283849.1| - 0.18 11.8 13.6 2.6 8.1 9.4 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4225 PF13988.6 gi|433638089|ref|YP_007283849.1| - 1.2 8.7 2.7 9.1 5.8 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4225) LysE PF01810.18 gi|433638090|ref|YP_007283850.1| - 1.5e-24 86.6 5.4 2.9e-22 79.1 5.4 2.1 1 1 0 1 1 1 1 LysE type translocator Topoisom_bac PF01131.20 gi|433638091|ref|YP_007283851.1| - 5e-122 407.9 0.0 6.3e-122 407.5 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|433638091|ref|YP_007283851.1| - 2.4e-21 75.2 16.6 1.4e-14 53.6 1.3 3.5 4 0 0 4 4 4 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|433638091|ref|YP_007283851.1| - 2.5e-17 63.0 0.0 5.1e-17 62.0 0.0 1.6 1 0 0 1 1 1 1 Toprim domain HHH_5 PF14520.6 gi|433638091|ref|YP_007283851.1| - 1.5e-10 41.5 0.3 7e-10 39.4 0.3 2.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|433638091|ref|YP_007283851.1| - 0.00014 21.6 0.1 0.0014 18.4 0.0 2.7 3 0 0 3 3 3 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|433638091|ref|YP_007283851.1| - 0.00068 19.8 0.0 0.0018 18.5 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus HHH PF00633.23 gi|433638091|ref|YP_007283851.1| - 0.003 17.3 0.5 0.015 15.1 0.1 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif DUF4332 PF14229.6 gi|433638091|ref|YP_007283851.1| - 0.0062 16.8 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) Lar_restr_allev PF14354.6 gi|433638091|ref|YP_007283851.1| - 0.049 14.0 0.4 0.049 14.0 0.4 3.1 3 0 0 3 3 3 0 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|433638091|ref|YP_007283851.1| - 1.9 8.0 5.5 17 5.0 0.1 3.9 3 0 0 3 3 3 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|433638091|ref|YP_007283851.1| - 8 6.3 9.2 19 5.2 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Beta-lactamase PF00144.24 gi|433638092|ref|YP_007283852.1| - 9.8e-62 209.1 0.7 1.3e-61 208.7 0.7 1.1 1 0 0 1 1 1 1 Beta-lactamase Pab87_oct PF13969.6 gi|433638092|ref|YP_007283852.1| - 3.5e-34 116.7 0.0 5.6e-34 116.1 0.0 1.3 1 0 0 1 1 1 1 Pab87 octamerisation domain MatE PF01554.18 gi|433638093|ref|YP_007283853.1| - 9.6e-56 187.9 32.0 8.1e-36 123.1 8.4 2.7 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|433638093|ref|YP_007283853.1| - 1.4e-07 31.7 9.6 1.4e-07 31.7 9.6 5.0 4 3 0 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MFS_1 PF07690.16 gi|433638094|ref|YP_007283854.1| - 1e-18 67.4 33.7 4.5e-18 65.3 20.4 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433638094|ref|YP_007283854.1| - 0.00063 18.7 1.6 0.13 11.1 0.0 2.7 1 1 1 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 gi|433638094|ref|YP_007283854.1| - 0.036 12.9 19.6 0.05 12.4 2.1 3.5 2 2 1 3 3 3 0 Sugar (and other) transporter HTH_20 PF12840.7 gi|433638095|ref|YP_007283855.1| - 4.8e-05 23.3 0.0 0.00014 21.9 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain DZR PF12773.7 gi|433638095|ref|YP_007283855.1| - 0.00017 21.5 4.5 0.063 13.3 0.4 2.5 2 0 0 2 2 2 2 Double zinc ribbon RNHCP PF12647.7 gi|433638095|ref|YP_007283855.1| - 0.0018 18.2 0.5 0.0049 16.8 0.1 1.8 2 0 0 2 2 2 1 RNHCP domain Elf1 PF05129.13 gi|433638095|ref|YP_007283855.1| - 0.0049 16.9 0.5 1.2 9.3 0.0 2.5 2 1 0 2 2 2 1 Transcription elongation factor Elf1 like zf-H2C2_2 PF13465.6 gi|433638095|ref|YP_007283855.1| - 0.012 16.0 3.4 0.13 12.8 0.0 3.7 4 0 0 4 4 4 0 Zinc-finger double domain HypA PF01155.19 gi|433638095|ref|YP_007283855.1| - 0.095 12.7 4.2 0.22 11.6 0.9 2.6 1 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2225 PF09986.9 gi|433638095|ref|YP_007283855.1| - 0.098 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) Ribosomal_L32p PF01783.23 gi|433638095|ref|YP_007283855.1| - 0.12 12.7 0.0 1.3 9.3 0.0 2.4 2 0 0 2 2 2 0 Ribosomal L32p protein family DUF2318 PF10080.9 gi|433638095|ref|YP_007283855.1| - 0.12 12.5 0.4 13 6.0 0.0 2.6 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) FdhE PF04216.12 gi|433638095|ref|YP_007283855.1| - 0.17 11.7 4.6 0.17 11.7 0.5 2.2 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation Zn_Tnp_IS91 PF14319.6 gi|433638095|ref|YP_007283855.1| - 0.26 11.3 3.2 19 5.4 0.0 3.0 2 1 1 3 3 3 0 Transposase zinc-binding domain zinc_ribbon_5 PF13719.6 gi|433638095|ref|YP_007283855.1| - 0.37 10.6 0.1 0.37 10.6 0.1 2.4 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433638095|ref|YP_007283855.1| - 0.45 10.7 9.2 4.1 7.6 1.9 3.1 3 0 0 3 3 3 0 Zinc ribbon domain PyrI_C PF02748.15 gi|433638095|ref|YP_007283855.1| - 0.62 10.0 0.0 0.62 10.0 0.0 2.3 2 1 1 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Rhodanese_C PF12368.8 gi|433638095|ref|YP_007283855.1| - 1.3 9.4 5.3 0.81 10.1 0.5 2.7 3 1 0 3 3 3 0 Rhodanase C-terminal zf-NADH-PPase PF09297.11 gi|433638095|ref|YP_007283855.1| - 1.7 8.4 8.6 1.9 8.2 0.1 2.9 3 0 0 3 3 2 0 NADH pyrophosphatase zinc ribbon domain Lar_restr_allev PF14354.6 gi|433638095|ref|YP_007283855.1| - 4.6 7.7 9.1 3.9 7.9 1.3 3.2 2 2 0 2 2 2 0 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.6 gi|433638095|ref|YP_007283855.1| - 5.9 6.9 6.8 4.7 7.2 0.1 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Cupin_2 PF07883.11 gi|433638096|ref|YP_007283856.1| - 1.7e-09 37.3 0.1 2.6e-09 36.7 0.1 1.3 1 0 0 1 1 1 1 Cupin domain HypA PF01155.19 gi|433638096|ref|YP_007283856.1| - 0.0011 19.0 0.4 0.0011 19.0 0.4 2.5 1 1 2 3 3 3 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MannoseP_isomer PF01050.18 gi|433638096|ref|YP_007283856.1| - 0.0048 16.8 0.0 0.0063 16.4 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Lar_restr_allev PF14354.6 gi|433638096|ref|YP_007283856.1| - 0.03 14.7 0.8 0.03 14.7 0.8 2.3 1 1 1 2 2 2 0 Restriction alleviation protein Lar FdtA PF05523.11 gi|433638096|ref|YP_007283856.1| - 0.12 12.1 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal eIF-5_eIF-2B PF01873.17 gi|433638096|ref|YP_007283856.1| - 0.13 12.1 2.9 3.4 7.6 0.1 2.2 2 0 0 2 2 2 0 Domain found in IF2B/IF5 Zn-ribbon_8 PF09723.10 gi|433638096|ref|YP_007283856.1| - 0.19 11.8 13.1 0.61 10.2 2.9 3.6 2 1 1 3 3 3 0 Zinc ribbon domain NMD3 PF04981.13 gi|433638096|ref|YP_007283856.1| - 0.31 10.5 1.6 0.42 10.0 1.6 1.1 1 0 0 1 1 1 0 NMD3 family TFIIS_C PF01096.18 gi|433638096|ref|YP_007283856.1| - 0.63 9.9 8.3 6.8 6.6 0.2 3.2 3 1 0 3 3 3 0 Transcription factor S-II (TFIIS) DnaJ_CXXCXGXG PF00684.19 gi|433638096|ref|YP_007283856.1| - 2 8.9 5.7 30 5.1 5.7 2.3 1 1 0 1 1 1 0 DnaJ central domain Anti-TRAP PF15777.5 gi|433638096|ref|YP_007283856.1| - 2.5 8.1 10.7 4 7.5 0.0 3.3 1 1 2 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein zinc_ribbon_9 PF14369.6 gi|433638096|ref|YP_007283856.1| - 4.2 7.7 12.6 8.6 6.7 0.2 3.7 3 1 1 4 4 4 0 zinc-ribbon TF_Zn_Ribbon PF08271.12 gi|433638096|ref|YP_007283856.1| - 5.3 6.6 7.9 9.9 5.8 0.7 2.7 2 1 0 2 2 2 0 TFIIB zinc-binding zf-TFIIB PF13453.6 gi|433638096|ref|YP_007283856.1| - 7.5 6.0 9.0 14 5.1 0.9 2.5 2 0 0 2 2 2 0 Transcription factor zinc-finger Prok-RING_4 PF14447.6 gi|433638096|ref|YP_007283856.1| - 9.7 6.1 10.2 0.22 11.4 1.7 2.3 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 GatB_N PF02934.15 gi|433638097|ref|YP_007283857.1| - 7.8e-99 330.5 0.0 1.1e-98 329.9 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|433638097|ref|YP_007283857.1| - 1.7e-41 141.6 0.0 2.5e-41 141.0 0.0 1.3 1 0 0 1 1 1 1 GatB domain SlyX PF04102.12 gi|433638098|ref|YP_007283858.1| - 0.013 16.1 3.9 0.013 16.1 3.9 1.6 2 1 0 2 2 2 0 SlyX TMF_DNA_bd PF12329.8 gi|433638098|ref|YP_007283858.1| - 0.03 14.3 1.0 0.054 13.5 1.0 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding SKA1 PF07160.12 gi|433638098|ref|YP_007283858.1| - 0.052 13.4 0.3 0.058 13.2 0.3 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 FlaC_arch PF05377.11 gi|433638098|ref|YP_007283858.1| - 0.063 13.7 2.2 0.095 13.1 2.2 1.3 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) OEP PF02321.18 gi|433638098|ref|YP_007283858.1| - 0.074 12.9 0.4 0.086 12.6 0.4 1.1 1 0 0 1 1 1 0 Outer membrane efflux protein bZIP_1 PF00170.21 gi|433638098|ref|YP_007283858.1| - 0.091 12.9 1.2 0.15 12.2 1.2 1.3 1 0 0 1 1 1 0 bZIP transcription factor NBP1 PF08537.10 gi|433638098|ref|YP_007283858.1| - 0.092 12.1 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 PspB PF06667.12 gi|433638098|ref|YP_007283858.1| - 0.1 12.7 2.2 0.24 11.5 2.2 1.7 1 1 0 1 1 1 0 Phage shock protein B SMC_N PF02463.19 gi|433638099|ref|YP_007283859.1| - 2.3e-48 164.5 59.0 6.9e-48 163.0 59.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|433638099|ref|YP_007283859.1| - 2.8e-28 98.5 0.0 1e-27 96.8 0.0 2.1 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 gi|433638099|ref|YP_007283859.1| - 3.4e-10 40.2 8.3 1.5e-06 28.2 0.0 4.9 3 2 0 3 3 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 gi|433638099|ref|YP_007283859.1| - 5.9e-10 38.5 103.0 2.2e-05 23.3 27.6 5.8 3 2 3 6 6 6 4 AAA domain AAA_15 PF13175.6 gi|433638099|ref|YP_007283859.1| - 1.9e-09 37.7 1.4 1.9e-09 37.7 1.4 4.9 2 2 1 4 4 2 1 AAA ATPase domain Spc7 PF08317.11 gi|433638099|ref|YP_007283859.1| - 2.4e-08 33.2 142.0 0.064 12.1 20.0 9.0 2 2 7 9 9 9 5 Spc7 kinetochore protein AAA_29 PF13555.6 gi|433638099|ref|YP_007283859.1| - 3.6e-07 29.8 0.0 6.9e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF3584 PF12128.8 gi|433638099|ref|YP_007283859.1| - 5.5e-07 27.6 23.8 5.5e-07 27.6 23.8 4.8 2 2 3 5 5 5 2 Protein of unknown function (DUF3584) APG6_N PF17675.1 gi|433638099|ref|YP_007283859.1| - 5.6e-07 30.2 183.0 0.052 14.1 25.6 9.5 2 2 7 9 9 9 5 Apg6 coiled-coil region CENP-F_leu_zip PF10473.9 gi|433638099|ref|YP_007283859.1| - 8.5e-07 29.1 157.0 0.022 14.8 24.4 8.5 2 2 6 9 9 9 6 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MscS_porin PF12795.7 gi|433638099|ref|YP_007283859.1| - 1.4e-06 28.0 114.3 0.0042 16.7 15.9 5.7 3 2 3 6 6 6 4 Mechanosensitive ion channel porin domain Atg14 PF10186.9 gi|433638099|ref|YP_007283859.1| - 1.5e-06 27.6 85.3 0.0019 17.3 11.3 7.0 2 2 6 8 8 8 3 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 gi|433638099|ref|YP_007283859.1| - 2.7e-06 26.9 117.0 3.4e-06 26.5 16.1 9.9 2 2 7 10 10 10 5 Protein of unknown function (DUF3450) DUF724 PF05266.14 gi|433638099|ref|YP_007283859.1| - 2.8e-06 27.3 101.0 0.0018 18.2 11.1 7.9 3 2 5 9 9 9 5 Protein of unknown function (DUF724) ATG16 PF08614.11 gi|433638099|ref|YP_007283859.1| - 3.6e-06 27.4 152.8 0.00029 21.1 20.1 8.4 3 2 5 8 8 8 4 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 gi|433638099|ref|YP_007283859.1| - 7.1e-06 26.1 132.9 0.03 14.4 17.5 8.7 3 2 4 8 8 8 4 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 gi|433638099|ref|YP_007283859.1| - 7.3e-06 26.0 81.3 0.018 15.1 5.5 10.4 4 2 5 10 10 10 7 Protein of unknown function (DUF1664) FPP PF05911.11 gi|433638099|ref|YP_007283859.1| - 1.2e-05 23.7 110.1 0.001 17.4 19.1 5.4 2 2 3 5 5 5 4 Filament-like plant protein, long coiled-coil DUF4407 PF14362.6 gi|433638099|ref|YP_007283859.1| - 2.8e-05 23.6 105.1 0.53 9.6 2.7 7.1 2 2 3 5 5 5 2 Domain of unknown function (DUF4407) Tropomyosin PF00261.20 gi|433638099|ref|YP_007283859.1| - 0.0001 21.7 56.4 0.0001 21.7 56.4 6.5 3 2 3 6 6 5 3 Tropomyosin DUF5082 PF16888.5 gi|433638099|ref|YP_007283859.1| - 0.0003 21.0 92.7 0.046 14.0 6.8 9.7 4 2 2 6 6 6 2 Domain of unknown function (DUF5082) Fib_alpha PF08702.10 gi|433638099|ref|YP_007283859.1| - 0.00032 20.9 67.7 0.076 13.2 7.3 7.2 2 2 6 8 8 8 3 Fibrinogen alpha/beta chain family DUF4201 PF13870.6 gi|433638099|ref|YP_007283859.1| - 0.00041 20.1 7.9 0.00041 20.1 7.9 9.0 3 2 3 8 8 7 3 Domain of unknown function (DUF4201) AAA_23 PF13476.6 gi|433638099|ref|YP_007283859.1| - 0.00044 20.8 141.6 0.005 17.4 52.7 8.4 3 2 2 5 5 2 1 AAA domain Fez1 PF06818.15 gi|433638099|ref|YP_007283859.1| - 0.00048 20.6 121.0 0.21 12.0 14.0 7.7 2 2 3 5 5 5 3 Fez1 Baculo_PEP_C PF04513.12 gi|433638099|ref|YP_007283859.1| - 0.00053 20.1 41.5 0.77 9.8 1.2 7.4 3 2 6 9 9 8 3 Baculovirus polyhedron envelope protein, PEP, C terminus UPF0242 PF06785.11 gi|433638099|ref|YP_007283859.1| - 0.00067 19.8 26.3 0.00067 19.8 26.3 7.7 2 2 6 8 8 8 2 Uncharacterised protein family (UPF0242) N-terminus EzrA PF06160.12 gi|433638099|ref|YP_007283859.1| - 0.00073 17.8 16.2 0.00073 17.8 16.2 6.3 2 2 4 6 6 6 2 Septation ring formation regulator, EzrA Laminin_II PF06009.12 gi|433638099|ref|YP_007283859.1| - 0.001 19.1 74.9 0.07 13.2 1.5 8.9 4 2 7 11 11 10 4 Laminin Domain II FliJ PF02050.16 gi|433638099|ref|YP_007283859.1| - 0.0021 18.3 97.8 0.65 10.2 1.2 9.6 3 2 5 9 9 9 5 Flagellar FliJ protein GAS PF13851.6 gi|433638099|ref|YP_007283859.1| - 0.0032 16.9 14.3 0.0032 16.9 14.3 7.9 2 2 6 8 8 8 5 Growth-arrest specific micro-tubule binding ERM PF00769.19 gi|433638099|ref|YP_007283859.1| - 0.004 17.0 19.1 0.004 17.0 19.1 6.9 2 2 5 7 7 7 2 Ezrin/radixin/moesin family TMPIT PF07851.13 gi|433638099|ref|YP_007283859.1| - 0.0063 15.8 71.3 0.3 10.3 7.8 7.3 2 2 5 7 7 7 5 TMPIT-like protein YscO PF07321.12 gi|433638099|ref|YP_007283859.1| - 0.0097 15.9 18.1 0.0097 15.9 18.1 9.4 4 2 5 9 9 5 1 Type III secretion protein YscO DUF4164 PF13747.6 gi|433638099|ref|YP_007283859.1| - 0.014 15.7 21.3 0.014 15.7 21.3 10.5 3 2 5 9 9 8 0 Domain of unknown function (DUF4164) Cep57_MT_bd PF06657.13 gi|433638099|ref|YP_007283859.1| - 0.014 15.8 5.9 0.014 15.8 5.9 12.1 4 3 9 14 14 14 0 Centrosome microtubule-binding domain of Cep57 AAA_27 PF13514.6 gi|433638099|ref|YP_007283859.1| - 0.021 14.4 0.0 0.021 14.4 0.0 6.6 3 2 2 6 6 6 0 AAA domain Exonuc_VII_L PF02601.15 gi|433638099|ref|YP_007283859.1| - 0.063 12.8 66.9 0.037 13.6 4.8 5.8 2 2 2 4 4 3 0 Exonuclease VII, large subunit IFT57 PF10498.9 gi|433638099|ref|YP_007283859.1| - 0.6 9.0 100.1 0.09 11.7 34.3 6.9 2 2 4 7 7 7 0 Intra-flagellar transport protein 57 ABC_tran PF00005.27 gi|433638099|ref|YP_007283859.1| - 0.66 10.5 0.0 0.66 10.5 0.0 5.9 3 2 1 5 5 2 0 ABC transporter AAA_22 PF13401.6 gi|433638099|ref|YP_007283859.1| - 0.91 9.8 3.6 5.7 7.2 0.0 4.0 4 0 0 4 4 2 0 AAA domain FlaC_arch PF05377.11 gi|433638099|ref|YP_007283859.1| - 1.1 9.7 105.6 0.15 12.5 2.8 14.2 8 5 9 17 17 16 0 Flagella accessory protein C (FlaC) DUF812 PF05667.11 gi|433638099|ref|YP_007283859.1| - 2.6 6.8 119.4 0.84 8.4 34.0 5.6 2 2 2 4 4 4 0 Protein of unknown function (DUF812) NPV_P10 PF05531.12 gi|433638099|ref|YP_007283859.1| - 3 8.4 74.5 0.1 13.1 1.4 11.2 5 3 5 10 10 8 0 Nucleopolyhedrovirus P10 protein T3SSipB PF16535.5 gi|433638099|ref|YP_007283859.1| - 3.6 8.1 74.6 0.036 14.5 3.4 8.4 2 2 6 8 8 8 0 Type III cell invasion protein SipB DUF4200 PF13863.6 gi|433638099|ref|YP_007283859.1| - 9.8 6.6 135.3 0.2 12.1 13.3 9.1 3 2 3 7 7 6 0 Domain of unknown function (DUF4200) SMC_ScpA PF02616.14 gi|433638100|ref|YP_007283860.1| - 7.3e-13 49.0 0.0 1.5e-08 34.9 0.0 2.3 2 0 0 2 2 2 2 Segregation and condensation protein ScpA Pribosyltran PF00156.27 gi|433638101|ref|YP_007283861.1| - 1.5e-16 60.3 0.0 2.2e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain ANAPC2 PF08672.11 gi|433638101|ref|YP_007283861.1| - 0.02 15.4 0.1 0.58 10.7 0.0 2.3 1 1 1 2 2 2 0 Anaphase promoting complex (APC) subunit 2 UPRTase PF14681.6 gi|433638101|ref|YP_007283861.1| - 0.03 13.7 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Pribosyl_synth PF14572.6 gi|433638101|ref|YP_007283861.1| - 0.073 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain Glyoxalase_2 PF12681.7 gi|433638102|ref|YP_007283862.1| - 3.5e-06 26.9 0.1 0.0023 17.9 0.0 3.5 3 1 0 3 3 3 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|433638102|ref|YP_007283862.1| - 1.3e-05 25.4 0.0 0.052 13.8 0.0 2.9 3 1 0 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF397 PF04149.12 gi|433638102|ref|YP_007283862.1| - 0.015 15.4 0.4 5.3 7.2 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF397) Acetyltransf_10 PF13673.7 gi|433638102|ref|YP_007283862.1| - 0.23 11.4 0.0 0.43 10.5 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MarR_2 PF12802.7 gi|433638104|ref|YP_007283864.1| - 8.4e-08 32.0 0.1 1.7e-05 24.6 0.0 2.5 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.6 gi|433638104|ref|YP_007283864.1| - 3.3e-07 30.4 0.0 0.00025 21.2 0.0 2.2 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|433638104|ref|YP_007283864.1| - 8.6e-07 28.7 0.0 0.018 14.9 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|433638104|ref|YP_007283864.1| - 1.7e-06 27.8 0.0 0.00014 21.7 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|433638104|ref|YP_007283864.1| - 1.7e-05 24.8 0.0 0.14 12.2 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_IclR PF09339.10 gi|433638104|ref|YP_007283864.1| - 4.1e-05 23.3 0.4 0.0051 16.6 0.0 2.6 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|433638104|ref|YP_007283864.1| - 0.00036 20.0 0.0 0.0055 16.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|433638104|ref|YP_007283864.1| - 0.00041 20.2 0.0 0.086 12.7 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DprA_WH PF17782.1 gi|433638104|ref|YP_007283864.1| - 0.00057 19.9 0.1 0.16 12.1 0.0 2.3 2 0 0 2 2 2 1 DprA winged helix domain Fe_dep_repress PF01325.19 gi|433638104|ref|YP_007283864.1| - 0.0013 18.8 0.0 0.003 17.7 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|433638104|ref|YP_007283864.1| - 0.0031 17.5 0.0 0.0098 15.8 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|433638104|ref|YP_007283864.1| - 0.047 13.7 0.0 0.15 12.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain GntR PF00392.21 gi|433638104|ref|YP_007283864.1| - 0.062 13.0 0.0 0.15 11.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|433638104|ref|YP_007283864.1| - 0.11 12.5 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 HTH domain Rrf2 PF02082.20 gi|433638104|ref|YP_007283864.1| - 0.12 12.8 0.0 0.34 11.3 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator DUF4423 PF14394.6 gi|433638104|ref|YP_007283864.1| - 0.17 11.6 0.0 0.99 9.1 0.0 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF4423) Band_7 PF01145.25 gi|433638105|ref|YP_007283865.1| - 6e-38 130.6 4.0 1.6e-37 129.3 4.0 1.7 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|433638105|ref|YP_007283865.1| - 0.00067 19.4 0.3 0.0013 18.5 0.3 1.5 1 0 0 1 1 1 1 SPFH domain-Band 7 family T3SS_basalb_I PF17001.5 gi|433638105|ref|YP_007283865.1| - 1.1 10.0 5.6 8.1 7.1 1.5 3.0 3 0 0 3 3 3 0 Type III secretion basal body protein I, YscI, HrpB, PscI NfeD PF01957.18 gi|433638106|ref|YP_007283866.1| - 6.6e-07 29.6 0.1 1.5e-06 28.4 0.1 1.6 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding DUF1418 PF07214.12 gi|433638106|ref|YP_007283866.1| - 5.3 7.0 5.3 8.1 6.4 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) PK PF00224.21 gi|433638108|ref|YP_007283868.1| - 1.1e-112 376.5 5.7 1.5e-112 376.0 5.7 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|433638108|ref|YP_007283868.1| - 7.2e-34 116.5 0.4 1.5e-33 115.5 0.4 1.6 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain PEP-utilizers PF00391.23 gi|433638108|ref|YP_007283868.1| - 5.1e-12 45.3 2.4 1.1e-11 44.3 1.2 2.3 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain tRNA-synt_1g PF09334.11 gi|433638109|ref|YP_007283869.1| - 1.6e-143 478.2 0.0 2e-143 477.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|433638109|ref|YP_007283869.1| - 5.1e-20 71.4 0.0 8.3e-20 70.7 0.0 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|433638109|ref|YP_007283869.1| - 2.4e-16 59.1 0.1 1.5e-09 36.7 0.2 3.0 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|433638109|ref|YP_007283869.1| - 2.2e-10 40.4 0.0 1.6e-06 27.7 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 gi|433638109|ref|YP_007283869.1| - 4.6e-10 39.6 0.0 8.9e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|433638109|ref|YP_007283869.1| - 0.002 17.1 0.1 1 8.2 0.0 3.1 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|433638109|ref|YP_007283869.1| - 0.069 12.1 0.0 0.25 10.2 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (R) Pyridoxal_deC PF00282.19 gi|433638110|ref|YP_007283870.1| - 6.6e-24 84.3 0.0 1.2e-23 83.5 0.0 1.3 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|433638110|ref|YP_007283870.1| - 5.1e-12 45.4 0.0 7e-12 45.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V SHMT PF00464.19 gi|433638110|ref|YP_007283870.1| - 0.0014 17.3 0.0 0.0034 16.0 0.0 1.5 1 1 0 1 1 1 1 Serine hydroxymethyltransferase MarR_2 PF12802.7 gi|433638111|ref|YP_007283871.1| - 6.6e-07 29.1 0.0 1.1e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|433638111|ref|YP_007283871.1| - 1.9e-06 27.6 0.0 2.9e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|433638111|ref|YP_007283871.1| - 0.00015 21.5 0.0 0.00042 20.1 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|433638111|ref|YP_007283871.1| - 0.00028 21.2 0.0 0.00042 20.6 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 gi|433638111|ref|YP_007283871.1| - 0.00071 19.6 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433638111|ref|YP_007283871.1| - 0.00073 19.0 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.11 gi|433638111|ref|YP_007283871.1| - 0.0022 18.0 0.0 0.017 15.1 0.0 2.0 1 1 1 2 2 2 1 Sulfolobus plasmid regulatory protein HTH_Crp_2 PF13545.6 gi|433638111|ref|YP_007283871.1| - 0.0051 16.8 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|433638111|ref|YP_007283871.1| - 0.0098 16.2 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor Fe_dep_repress PF01325.19 gi|433638111|ref|YP_007283871.1| - 0.041 14.1 0.0 0.067 13.4 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|433638111|ref|YP_007283871.1| - 0.042 14.4 0.0 0.062 13.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|433638111|ref|YP_007283871.1| - 0.043 13.8 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 HTH domain MarR PF01047.22 gi|433638111|ref|YP_007283871.1| - 0.051 13.5 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF2250 PF10007.9 gi|433638111|ref|YP_007283871.1| - 0.069 13.3 0.0 0.093 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 gi|433638111|ref|YP_007283871.1| - 0.1 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_CodY PF08222.11 gi|433638111|ref|YP_007283871.1| - 0.11 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 CodY helix-turn-helix domain HemN_C PF06969.16 gi|433638111|ref|YP_007283871.1| - 0.13 12.3 0.1 1.4 9.0 0.0 2.4 2 1 1 3 3 3 0 HemN C-terminal domain PemK_toxin PF02452.17 gi|433638112|ref|YP_007283872.1| - 0.0063 16.9 0.0 0.0067 16.8 0.0 1.1 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system PPDK_N PF01326.19 gi|433638113|ref|YP_007283873.1| - 3e-107 358.7 0.0 4.9e-107 358.0 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|433638113|ref|YP_007283873.1| - 2.2e-83 279.8 0.0 3.2e-83 279.2 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|433638113|ref|YP_007283873.1| - 3e-28 97.3 2.4 7.3e-28 96.1 2.4 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain RdRP PF05183.12 gi|433638113|ref|YP_007283873.1| - 0.0072 15.0 0.0 0.031 12.9 0.0 1.8 2 0 0 2 2 2 1 RNA dependent RNA polymerase BTAD PF03704.17 gi|433638113|ref|YP_007283873.1| - 0.025 15.0 0.1 0.28 11.6 0.1 2.3 2 0 0 2 2 2 0 Bacterial transcriptional activator domain UBM PF14377.6 gi|433638113|ref|YP_007283873.1| - 0.075 12.5 0.1 0.28 10.7 0.1 2.1 1 0 0 1 1 1 0 Ubiquitin binding region Glyoxalase_6 PF18029.1 gi|433638113|ref|YP_007283873.1| - 0.21 12.4 4.4 0.59 11.0 1.1 2.8 2 0 0 2 2 2 0 Glyoxalase-like domain HMG-CoA_red PF00368.18 gi|433638114|ref|YP_007283874.1| - 5.6e-129 430.3 8.2 6.4e-129 430.1 8.2 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Amidohydro_3 PF07969.11 gi|433638115|ref|YP_007283875.1| - 1.1e-88 298.8 13.2 1.5e-88 298.4 13.2 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|433638115|ref|YP_007283875.1| - 3.9e-17 62.6 0.1 2.1e-12 47.0 0.0 2.7 2 1 0 2 2 2 2 Amidohydrolase family AAA_25 PF13481.6 gi|433638115|ref|YP_007283875.1| - 0.044 13.4 0.9 0.092 12.3 0.9 1.6 1 0 0 1 1 1 0 AAA domain stn_TNFRSF12A PF12191.8 gi|433638116|ref|YP_007283876.1| - 0.052 13.8 2.0 0.084 13.1 1.3 1.7 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Epimerase PF01370.21 gi|433638117|ref|YP_007283877.1| - 4.5e-32 111.4 0.2 5.6e-30 104.6 0.2 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|433638117|ref|YP_007283877.1| - 3.3e-09 36.9 0.0 5.4e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 gi|433638117|ref|YP_007283877.1| - 9.8e-09 34.6 0.0 8.8e-06 24.9 0.0 2.1 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|433638117|ref|YP_007283877.1| - 7.6e-07 28.8 0.0 0.0012 18.3 0.0 2.1 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|433638117|ref|YP_007283877.1| - 3.7e-05 23.0 0.0 0.15 11.2 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein NmrA PF05368.13 gi|433638117|ref|YP_007283877.1| - 0.0015 18.1 0.0 0.0023 17.6 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 gi|433638117|ref|YP_007283877.1| - 0.014 14.5 0.0 0.79 8.8 0.0 2.2 2 0 0 2 2 2 0 RmlD substrate binding domain adh_short PF00106.25 gi|433638117|ref|YP_007283877.1| - 0.033 13.6 0.0 0.067 12.6 0.0 1.5 2 0 0 2 2 2 0 short chain dehydrogenase TrkA_N PF02254.18 gi|433638117|ref|YP_007283877.1| - 0.047 14.0 0.0 0.094 13.0 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain PKI PF02827.16 gi|433638117|ref|YP_007283877.1| - 0.084 13.1 0.1 0.21 11.8 0.1 1.6 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor TANGO2 PF05742.12 gi|433638119|ref|YP_007283879.1| - 6.9e-23 82.0 0.0 3.5e-22 79.7 0.0 1.8 1 1 0 1 1 1 1 Transport and Golgi organisation 2 DUF2111 PF09884.9 gi|433638119|ref|YP_007283879.1| - 0.034 14.2 0.0 0.62 10.2 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2111) MarR PF01047.22 gi|433638120|ref|YP_007283880.1| - 0.0001 22.2 0.0 0.00014 21.7 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|433638120|ref|YP_007283880.1| - 0.00016 21.4 0.0 0.00027 20.8 0.0 1.4 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 gi|433638120|ref|YP_007283880.1| - 0.025 14.7 0.0 0.035 14.3 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC TrmB PF01978.19 gi|433638120|ref|YP_007283880.1| - 0.028 14.3 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|433638120|ref|YP_007283880.1| - 0.029 14.9 0.0 0.037 14.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rio2_N PF09202.11 gi|433638120|ref|YP_007283880.1| - 0.1 12.8 0.0 0.24 11.6 0.0 1.9 1 1 1 2 2 2 0 Rio2, N-terminal DUF2239 PF09998.9 gi|433638121|ref|YP_007283881.1| - 0.078 12.8 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) Amidase PF01425.21 gi|433638122|ref|YP_007283882.1| - 2.9e-146 488.0 1.1 3.5e-146 487.7 1.1 1.0 1 0 0 1 1 1 1 Amidase Glu-tRNAGln PF02686.15 gi|433638123|ref|YP_007283883.1| - 1.4e-13 50.9 1.3 2.1e-13 50.3 1.3 1.3 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit DUF3322 PF11795.8 gi|433638123|ref|YP_007283883.1| - 0.072 13.1 0.6 0.084 12.9 0.6 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) Ferredoxin_N PF16947.5 gi|433638124|ref|YP_007283884.1| - 2.7e-32 110.7 3.2 7.8e-32 109.2 3.2 1.8 1 0 0 1 1 1 1 N-terminal region of 4Fe-4S ferredoxin iron-sulfur binding Fer4_7 PF12838.7 gi|433638124|ref|YP_007283884.1| - 4.1e-15 56.1 18.8 2.1e-08 34.6 6.2 3.4 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|433638124|ref|YP_007283884.1| - 2.5e-13 50.0 17.2 1.9e-12 47.2 5.4 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|433638124|ref|YP_007283884.1| - 1.1e-12 47.8 18.8 3.3e-09 36.7 0.3 3.6 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433638124|ref|YP_007283884.1| - 5.1e-11 42.6 15.6 2e-06 27.8 3.7 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|433638124|ref|YP_007283884.1| - 7.5e-08 31.9 33.6 0.00013 21.7 3.5 5.1 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|433638124|ref|YP_007283884.1| - 7.6e-07 28.9 29.8 0.0011 19.0 2.9 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|433638124|ref|YP_007283884.1| - 3.1e-06 27.5 14.7 0.00088 19.7 1.0 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433638124|ref|YP_007283884.1| - 0.00021 21.2 10.9 0.00038 20.4 2.2 4.9 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|433638124|ref|YP_007283884.1| - 0.00093 20.0 41.2 0.22 12.5 1.8 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|433638124|ref|YP_007283884.1| - 0.0021 18.5 19.1 0.0081 16.7 1.1 4.0 3 1 1 4 4 4 1 4Fe-4S dicluster domain TAT_signal PF10518.9 gi|433638124|ref|YP_007283884.1| - 0.0048 16.7 0.3 0.011 15.6 0.3 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence SHOCT PF09851.9 gi|433638124|ref|YP_007283884.1| - 0.013 15.2 0.3 0.027 14.2 0.3 1.5 1 0 0 1 1 1 0 Short C-terminal domain Fer4_15 PF13459.6 gi|433638124|ref|YP_007283884.1| - 0.015 16.0 9.7 1.7 9.5 0.6 4.1 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|433638124|ref|YP_007283884.1| - 0.12 13.3 27.3 2.1 9.3 3.2 4.6 2 1 1 4 4 3 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|433638124|ref|YP_007283884.1| - 0.13 12.4 23.7 2 8.6 10.8 3.7 3 1 0 3 3 3 0 4Fe-4S dicluster domain VbhA PF18495.1 gi|433638124|ref|YP_007283884.1| - 0.15 12.0 0.2 0.15 12.0 0.2 2.7 3 0 0 3 3 3 0 Antitoxin VbhA NrfD PF03916.14 gi|433638125|ref|YP_007283885.1| - 5.6e-23 82.1 27.6 5.6e-23 82.1 27.6 2.0 3 0 0 3 3 3 1 Polysulphide reductase, NrfD Phage_holin_Dp1 PF16938.5 gi|433638125|ref|YP_007283885.1| - 0.097 12.9 4.9 0.13 12.5 2.7 2.5 2 0 0 2 2 2 0 Putative phage holin Dp-1 DUF3649 PF12365.8 gi|433638126|ref|YP_007283886.1| - 3 7.7 5.3 0.92 9.3 1.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) ParA PF10609.9 gi|433638127|ref|YP_007283887.1| - 3e-84 282.3 0.0 4.1e-84 281.9 0.0 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase FeS_assembly_P PF01883.19 gi|433638127|ref|YP_007283887.1| - 1.2e-13 51.0 2.3 2.6e-13 49.9 1.2 2.1 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein CbiA PF01656.23 gi|433638127|ref|YP_007283887.1| - 2.7e-12 46.9 0.0 6.8e-12 45.5 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|433638127|ref|YP_007283887.1| - 8.8e-11 42.0 0.5 2.7e-08 33.9 0.3 2.2 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|433638127|ref|YP_007283887.1| - 1.1e-05 24.8 2.5 0.00042 19.6 0.6 2.7 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_26 PF13500.6 gi|433638127|ref|YP_007283887.1| - 6.2e-05 22.9 0.1 0.2 11.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain MipZ PF09140.11 gi|433638127|ref|YP_007283887.1| - 0.00028 20.3 0.3 0.00042 19.7 0.3 1.4 1 1 0 1 1 1 1 ATPase MipZ VirC1 PF07015.11 gi|433638127|ref|YP_007283887.1| - 0.0019 17.5 0.1 0.0035 16.7 0.1 1.4 1 0 0 1 1 1 1 VirC1 protein CBP_BcsQ PF06564.12 gi|433638127|ref|YP_007283887.1| - 0.0029 17.1 0.4 0.084 12.3 0.7 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|433638127|ref|YP_007283887.1| - 0.013 15.1 0.2 0.019 14.6 0.2 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 gi|433638127|ref|YP_007283887.1| - 0.066 12.7 0.2 0.11 11.9 0.2 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.20 gi|433638127|ref|YP_007283887.1| - 0.078 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase MobB PF03205.14 gi|433638127|ref|YP_007283887.1| - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Asn_synthase PF00733.21 gi|433638128|ref|YP_007283888.1| - 1.6e-30 107.0 4.8 3.9e-19 69.5 2.5 2.1 1 1 1 2 2 2 2 Asparagine synthase PHP_C PF13263.6 gi|433638129|ref|YP_007283889.1| - 9.3e-22 76.5 1.2 1.6e-21 75.8 0.9 1.6 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|433638129|ref|YP_007283889.1| - 1.4e-09 38.5 0.0 1.9e-09 38.0 0.0 1.4 1 1 0 1 1 1 1 PHP domain AIRS_C PF02769.22 gi|433638130|ref|YP_007283890.1| - 7.6e-43 146.3 3.4 5.5e-32 111.0 0.9 2.6 3 0 0 3 3 3 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|433638130|ref|YP_007283890.1| - 1.2e-38 131.6 10.8 2.4e-21 76.2 0.2 3.4 4 0 0 4 4 4 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|433638130|ref|YP_007283890.1| - 1e-06 29.2 0.1 2e-06 28.2 0.1 1.5 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain HalX PF08663.10 gi|433638131|ref|YP_007283891.1| - 3.5e-21 75.3 7.2 6.5e-21 74.4 7.2 1.5 1 0 0 1 1 1 1 HalX domain Response_reg PF00072.24 gi|433638131|ref|YP_007283891.1| - 6.4e-19 68.2 0.1 9.9e-19 67.6 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain PAS_4 PF08448.10 gi|433638132|ref|YP_007283892.1| - 3.1e-16 59.6 5.3 1.3e-11 44.7 0.2 2.6 2 0 0 2 2 2 2 PAS fold GAF_2 PF13185.6 gi|433638132|ref|YP_007283892.1| - 1.4e-14 54.6 1.1 4e-14 53.1 0.1 2.3 2 1 0 2 2 2 1 GAF domain PAS_9 PF13426.7 gi|433638132|ref|YP_007283892.1| - 3.1e-12 46.6 0.0 3.7e-05 23.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 gi|433638132|ref|YP_007283892.1| - 2.7e-09 37.0 0.0 0.00014 21.8 0.0 2.8 2 0 0 2 2 2 2 PAS fold GAF_3 PF13492.6 gi|433638132|ref|YP_007283892.1| - 4.6e-09 36.7 0.0 1.7e-08 34.8 0.0 2.1 2 0 0 2 2 2 1 GAF domain PAS_7 PF12860.7 gi|433638132|ref|YP_007283892.1| - 0.00044 20.4 1.4 0.18 12.0 0.4 3.7 3 1 0 3 3 3 1 PAS fold PAS_10 PF13596.6 gi|433638132|ref|YP_007283892.1| - 0.0024 18.4 0.0 0.53 10.9 0.0 2.8 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.7 gi|433638132|ref|YP_007283892.1| - 0.1 12.7 1.7 0.72 9.9 0.2 3.0 3 0 0 3 3 3 0 PAS domain Synaptobrevin PF00957.21 gi|433638132|ref|YP_007283892.1| - 0.16 11.7 3.3 0.18 11.6 0.7 2.2 3 0 0 3 3 3 0 Synaptobrevin CobT PF06213.12 gi|433638133|ref|YP_007283893.1| - 0.2 11.0 15.3 0.26 10.7 15.3 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Nop14 PF04147.12 gi|433638133|ref|YP_007283893.1| - 4.1 5.5 19.3 4.6 5.3 19.3 1.0 1 0 0 1 1 1 0 Nop14-like family Sigma70_ner PF04546.13 gi|433638133|ref|YP_007283893.1| - 5.4 6.8 12.1 9.3 6.1 12.1 1.5 1 0 0 1 1 1 0 Sigma-70, non-essential region SDA1 PF05285.12 gi|433638133|ref|YP_007283893.1| - 7.5 5.9 17.3 8.1 5.8 17.3 1.2 1 0 0 1 1 1 0 SDA1 AhpC-TSA PF00578.21 gi|433638134|ref|YP_007283894.1| - 2.6e-09 37.0 0.0 3.6e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|433638134|ref|YP_007283894.1| - 1.9e-08 34.1 0.0 2.4e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin NAD_kinase PF01513.21 gi|433638136|ref|YP_007283896.1| - 5e-36 124.4 1.4 8.3e-36 123.7 1.4 1.4 1 1 1 2 2 2 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|433638136|ref|YP_007283896.1| - 0.00038 20.1 0.2 0.0006 19.4 0.2 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain ATPase PF06745.13 gi|433638137|ref|YP_007283897.1| - 2.3e-54 184.2 0.0 2.7e-54 184.0 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|433638137|ref|YP_007283897.1| - 3.6e-05 23.4 0.1 6.2e-05 22.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|433638137|ref|YP_007283897.1| - 3.7e-05 22.5 0.1 5.2e-05 22.1 0.1 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein MEDS PF14417.6 gi|433638137|ref|YP_007283897.1| - 0.00018 21.4 0.0 0.00034 20.5 0.0 1.6 1 1 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_24 PF13479.6 gi|433638137|ref|YP_007283897.1| - 0.0003 20.6 0.0 0.00089 19.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|433638137|ref|YP_007283897.1| - 0.00041 19.7 0.0 0.00071 18.9 0.0 1.3 1 0 0 1 1 1 1 Rad51 DnaB_C PF03796.15 gi|433638137|ref|YP_007283897.1| - 0.00052 19.4 0.1 0.043 13.1 0.0 2.2 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain AAA_14 PF13173.6 gi|433638137|ref|YP_007283897.1| - 0.0094 16.0 0.0 0.017 15.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain RecA PF00154.21 gi|433638137|ref|YP_007283897.1| - 0.02 14.4 0.0 0.18 11.2 0.0 2.1 2 0 0 2 2 2 0 recA bacterial DNA recombination protein PhoH PF02562.16 gi|433638137|ref|YP_007283897.1| - 0.025 14.1 0.0 0.043 13.3 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein T2SSE PF00437.20 gi|433638137|ref|YP_007283897.1| - 0.056 12.5 0.0 0.086 11.9 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF2075 PF09848.9 gi|433638137|ref|YP_007283897.1| - 0.066 12.4 0.0 0.096 11.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 gi|433638137|ref|YP_007283897.1| - 0.088 13.1 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|433638137|ref|YP_007283897.1| - 0.1 12.4 0.0 0.18 11.5 0.0 1.4 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|433638137|ref|YP_007283897.1| - 0.12 12.6 0.7 0.36 11.1 0.2 1.9 1 1 1 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|433638137|ref|YP_007283897.1| - 0.16 11.7 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase LVIVD PF08309.11 gi|433638139|ref|YP_007283899.1| - 1.2e-17 62.9 4.2 5e-05 22.5 0.0 4.8 4 0 0 4 4 4 4 LVIVD repeat PKD PF00801.20 gi|433638139|ref|YP_007283899.1| - 4.5e-15 55.3 1.9 4.5e-15 55.3 1.9 2.6 4 0 0 4 4 4 1 PKD domain Beta_propel PF09826.9 gi|433638139|ref|YP_007283899.1| - 7.6e-05 21.8 0.7 0.048 12.5 0.1 3.1 2 1 1 3 3 3 2 Beta propeller domain ChitinaseA_N PF08329.10 gi|433638139|ref|YP_007283899.1| - 0.036 13.7 5.6 0.051 13.2 1.6 2.9 1 1 2 3 3 3 0 Chitinase A, N-terminal domain TAT_signal PF10518.9 gi|433638139|ref|YP_007283899.1| - 3.5 7.6 6.9 0.15 11.9 1.3 1.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Thi4 PF01946.17 gi|433638140|ref|YP_007283900.1| - 4e-59 199.7 0.8 3.2e-56 190.2 0.4 2.4 2 1 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.7 gi|433638140|ref|YP_007283900.1| - 5.4e-11 42.5 0.1 8.4e-11 41.9 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|433638140|ref|YP_007283900.1| - 2.2e-10 40.2 0.2 7.4e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 gi|433638140|ref|YP_007283900.1| - 3.8e-10 39.6 0.1 8.2e-10 38.5 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 gi|433638140|ref|YP_007283900.1| - 6.1e-10 39.2 1.1 2.3e-05 24.1 0.1 2.5 1 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|433638140|ref|YP_007283900.1| - 7.6e-09 34.8 0.0 1e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|433638140|ref|YP_007283900.1| - 1.4e-07 31.7 0.1 2.8e-07 30.7 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|433638140|ref|YP_007283900.1| - 2.3e-07 30.4 0.1 5.2e-07 29.2 0.0 1.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433638140|ref|YP_007283900.1| - 5.8e-05 23.6 0.7 0.00013 22.4 0.1 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|433638140|ref|YP_007283900.1| - 6.4e-05 22.0 0.1 0.025 13.4 0.1 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.6 gi|433638140|ref|YP_007283900.1| - 6.5e-05 22.3 0.0 0.00012 21.5 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|433638140|ref|YP_007283900.1| - 0.00026 20.2 0.3 0.0075 15.4 0.1 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein Shikimate_DH PF01488.20 gi|433638140|ref|YP_007283900.1| - 0.0005 20.1 0.0 0.04 14.0 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 gi|433638140|ref|YP_007283900.1| - 0.0011 19.0 0.3 0.0035 17.3 0.1 1.9 2 0 0 2 2 2 1 FAD-NAD(P)-binding Glu_dehyd_C PF16912.5 gi|433638140|ref|YP_007283900.1| - 0.0013 18.3 0.1 1.3 8.4 0.0 2.4 2 0 0 2 2 2 2 Glucose dehydrogenase C-terminus GIDA PF01134.22 gi|433638140|ref|YP_007283900.1| - 0.0013 17.9 0.1 0.0021 17.2 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Amino_oxidase PF01593.24 gi|433638140|ref|YP_007283900.1| - 0.0013 18.1 0.0 0.0038 16.6 0.0 1.7 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.6 gi|433638140|ref|YP_007283900.1| - 0.0095 16.4 0.0 0.019 15.4 0.0 1.6 1 1 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|433638140|ref|YP_007283900.1| - 0.061 13.6 0.8 0.12 12.6 0.1 1.9 2 0 0 2 2 2 0 TrkA-N domain GTP-bdg_N PF13167.6 gi|433638141|ref|YP_007283901.1| - 4.2e-19 69.0 0.0 1.2e-18 67.6 0.0 1.8 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|433638141|ref|YP_007283901.1| - 4.1e-13 49.4 0.1 1.3e-12 47.8 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|433638141|ref|YP_007283901.1| - 4.5e-07 30.4 4.9 5.2e-06 27.0 4.9 2.6 1 1 0 1 1 1 1 GTP-binding GTPase Middle Region RsgA_GTPase PF03193.16 gi|433638141|ref|YP_007283901.1| - 5.3e-07 29.7 0.1 0.0057 16.6 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|433638141|ref|YP_007283901.1| - 4.5e-05 23.1 0.6 4.5e-05 23.1 0.6 2.3 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|433638141|ref|YP_007283901.1| - 0.00038 20.0 0.3 0.82 9.1 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 gi|433638141|ref|YP_007283901.1| - 0.00045 20.2 0.0 0.00092 19.2 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain cobW PF02492.19 gi|433638141|ref|YP_007283901.1| - 0.0015 18.1 0.8 0.12 12.0 0.4 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain FeoB_N PF02421.18 gi|433638141|ref|YP_007283901.1| - 0.013 15.1 0.1 4.3 6.8 0.1 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_16 PF13191.6 gi|433638141|ref|YP_007283901.1| - 0.018 15.4 0.9 0.018 15.4 0.9 2.7 1 1 2 3 3 3 0 AAA ATPase domain Trans_reg_C PF00486.28 gi|433638141|ref|YP_007283901.1| - 0.066 13.3 1.2 0.11 12.6 0.2 1.9 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal PPS_PS PF02006.16 gi|433638142|ref|YP_007283902.1| - 5.3e-75 250.8 1.5 6.6e-75 250.5 1.5 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase RTT107_BRCT_6 PF16771.5 gi|433638142|ref|YP_007283902.1| - 0.22 11.7 0.0 0.34 11.1 0.0 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF1508 PF07411.12 gi|433638143|ref|YP_007283903.1| - 1.4e-81 268.2 1.0 8.8e-10 38.3 0.1 12.9 13 0 0 13 13 13 12 Domain of unknown function (DUF1508) DDE_Tnp_IS240 PF13610.6 gi|433638143|ref|YP_007283903.1| - 4.3e-07 30.2 1.9 3 8.1 0.0 6.5 5 2 2 7 7 7 1 DDE domain DUF2914 PF11141.8 gi|433638143|ref|YP_007283903.1| - 0.0012 18.6 11.5 0.15 11.8 0.0 6.1 6 0 0 6 6 6 1 Protein of unknown function (DUF2914) Stimulus_sens_1 PF13756.6 gi|433638143|ref|YP_007283903.1| - 0.0016 19.0 0.1 1.5 9.4 0.0 3.7 3 0 0 3 3 3 1 Stimulus-sensing domain GH101_N PF17995.1 gi|433638143|ref|YP_007283903.1| - 0.0033 17.1 0.2 18 4.9 0.0 3.8 3 0 0 3 3 3 0 Endo-alpha-N-acetylgalactosaminidase N-terminal SPOR PF05036.13 gi|433638143|ref|YP_007283903.1| - 0.014 15.8 1.0 97 3.5 0.0 6.7 11 0 0 11 11 11 0 Sporulation related domain DUF5643 PF18705.1 gi|433638143|ref|YP_007283903.1| - 0.08 12.9 0.2 4.3 7.3 0.0 3.0 2 1 1 3 3 3 0 Family of unknown function (DUF5643) DUF1416 PF07210.12 gi|433638143|ref|YP_007283903.1| - 0.28 11.1 10.4 17 5.4 0.1 6.1 4 1 3 8 8 8 0 Protein of unknown function (DUF1416) Nucleoporin2 PF04096.14 gi|433638143|ref|YP_007283903.1| - 0.32 11.1 2.0 29 4.8 0.0 3.6 4 0 0 4 4 4 0 Nucleoporin autopeptidase DUF998 PF06197.13 gi|433638143|ref|YP_007283903.1| - 3.4 7.2 15.5 1.1 8.8 3.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF998) DUF4203 PF13886.6 gi|433638143|ref|YP_007283903.1| - 4.5 6.9 9.9 7.4 6.2 9.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) GHMP_kinases_N PF00288.26 gi|433638144|ref|YP_007283904.1| - 1.9e-06 28.0 4.3 4.4e-06 26.8 4.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|433638144|ref|YP_007283904.1| - 7.1e-05 23.1 1.7 0.00064 20.0 0.1 2.8 3 0 0 3 3 3 1 GHMP kinases C terminal MCPsignal PF00015.21 gi|433638145|ref|YP_007283905.1| - 1.3e-33 116.3 24.7 1.3e-33 116.3 24.7 5.1 2 1 3 5 5 5 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|433638145|ref|YP_007283905.1| - 1.2e-10 41.6 0.1 1.2e-10 41.6 0.1 4.9 5 1 0 5 5 5 1 HAMP domain dCache_1 PF02743.18 gi|433638145|ref|YP_007283905.1| - 1e-07 32.1 1.0 1e-07 32.1 1.0 4.2 2 1 1 3 3 2 1 Cache domain DUF948 PF06103.11 gi|433638145|ref|YP_007283905.1| - 0.036 14.3 45.9 0.16 12.2 2.5 8.3 3 1 4 8 8 8 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.11 gi|433638145|ref|YP_007283905.1| - 0.095 11.6 42.8 0.01 14.8 15.6 3.5 1 1 1 3 3 3 0 Spc7 kinetochore protein DASH_Duo1 PF08651.10 gi|433638145|ref|YP_007283905.1| - 0.22 11.3 9.6 2 8.2 0.2 4.6 4 0 0 4 4 4 0 DASH complex subunit Duo1 Laminin_II PF06009.12 gi|433638145|ref|YP_007283905.1| - 0.37 10.8 45.8 0.47 10.5 6.9 5.5 2 2 3 5 5 5 0 Laminin Domain II Alpha-2-MRAP_C PF06401.11 gi|433638145|ref|YP_007283905.1| - 0.41 10.6 19.9 2.2 8.2 9.2 2.9 2 1 0 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain TssO PF17561.2 gi|433638145|ref|YP_007283905.1| - 0.41 10.7 7.9 0.27 11.3 0.6 3.6 4 0 0 4 4 4 0 Type VI secretion system, TssO FCH PF00611.23 gi|433638145|ref|YP_007283905.1| - 0.45 10.8 4.4 39 4.6 0.1 4.1 4 0 0 4 4 3 0 Fes/CIP4, and EFC/F-BAR homology domain DUF4200 PF13863.6 gi|433638145|ref|YP_007283905.1| - 0.53 10.7 32.7 0.39 11.1 5.5 4.7 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) AI-2E_transport PF01594.16 gi|433638145|ref|YP_007283905.1| - 0.77 8.8 3.1 10 5.1 0.0 3.2 3 1 1 4 4 4 0 AI-2E family transporter FUSC PF04632.12 gi|433638145|ref|YP_007283905.1| - 1.4 7.3 42.3 0.56 8.7 8.4 3.6 1 1 2 3 3 3 0 Fusaric acid resistance protein family KxDL PF10241.9 gi|433638145|ref|YP_007283905.1| - 1.9 8.8 24.2 0.047 14.0 3.5 5.2 5 1 1 6 6 6 0 Uncharacterized conserved protein AIP3 PF03915.13 gi|433638145|ref|YP_007283905.1| - 3 6.8 45.3 0.47 9.5 13.4 3.4 2 1 2 4 4 4 0 Actin interacting protein 3 AAA_13 PF13166.6 gi|433638145|ref|YP_007283905.1| - 3.7 6.1 43.5 17 3.8 24.4 2.8 1 1 1 2 2 2 0 AAA domain tRNA-synt_2 PF00152.20 gi|433638146|ref|YP_007283906.1| - 9.8e-85 284.4 0.0 1.2e-84 284.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|433638146|ref|YP_007283906.1| - 1.4e-13 50.6 0.3 2.5e-13 49.8 0.3 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|433638146|ref|YP_007283906.1| - 0.0099 15.4 0.1 0.19 11.2 0.1 2.3 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) Methyltransf_25 PF13649.6 gi|433638147|ref|YP_007283907.1| - 9.1e-15 55.1 0.0 1.9e-14 54.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638147|ref|YP_007283907.1| - 1.1e-14 54.8 0.0 2.2e-14 53.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638147|ref|YP_007283907.1| - 1.4e-13 50.9 0.0 1.6e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638147|ref|YP_007283907.1| - 4.1e-12 46.7 0.0 6.9e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638147|ref|YP_007283907.1| - 8.6e-12 45.2 0.0 1.1e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433638147|ref|YP_007283907.1| - 1e-08 34.8 0.0 1.3e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|433638147|ref|YP_007283907.1| - 5.2e-08 32.9 0.1 7.6e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|433638147|ref|YP_007283907.1| - 2.6e-07 30.9 0.0 1.5e-06 28.4 0.0 1.9 1 1 1 2 2 2 1 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|433638147|ref|YP_007283907.1| - 0.0028 17.2 0.0 0.004 16.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_19 PF04672.12 gi|433638147|ref|YP_007283907.1| - 0.0038 16.8 0.2 0.006 16.1 0.2 1.4 1 0 0 1 1 1 1 S-adenosyl methyltransferase Fibrillarin PF01269.17 gi|433638147|ref|YP_007283907.1| - 0.0074 15.4 0.0 0.012 14.8 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltr_RsmB-F PF01189.17 gi|433638147|ref|YP_007283907.1| - 0.029 14.0 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|433638147|ref|YP_007283907.1| - 0.042 13.8 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain GCD14 PF08704.10 gi|433638147|ref|YP_007283907.1| - 0.07 12.8 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit CMAS PF02353.20 gi|433638147|ref|YP_007283907.1| - 0.14 11.4 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_33 PF10017.9 gi|433638147|ref|YP_007283907.1| - 0.16 11.1 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent MetW PF07021.12 gi|433638147|ref|YP_007283907.1| - 0.19 11.3 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW ThiP_synth PF10120.9 gi|433638148|ref|YP_007283908.1| - 1.9e-52 177.2 0.1 3.1e-52 176.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine-phosphate synthase HTH_3 PF01381.22 gi|433638148|ref|YP_007283908.1| - 5.2e-07 29.6 0.0 1.2e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 gi|433638148|ref|YP_007283908.1| - 0.00058 19.6 0.2 0.0043 16.8 0.0 2.3 2 0 0 2 2 2 1 Homeodomain-like domain HTH_31 PF13560.6 gi|433638148|ref|YP_007283908.1| - 0.00064 20.0 0.2 0.0021 18.4 0.2 2.1 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|433638148|ref|YP_007283908.1| - 0.0017 18.4 0.0 0.0042 17.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|433638148|ref|YP_007283908.1| - 0.0018 18.2 0.0 0.0037 17.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433638148|ref|YP_007283908.1| - 0.0026 17.6 0.0 0.0095 15.8 0.0 2.0 1 0 0 1 1 1 1 MarR family Sigma70_r4 PF04545.16 gi|433638148|ref|YP_007283908.1| - 0.0051 16.3 3.4 0.013 15.0 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|433638148|ref|YP_007283908.1| - 0.0084 15.6 0.0 0.13 11.9 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|433638148|ref|YP_007283908.1| - 0.01 15.9 0.2 6 7.0 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain RepB PF07506.11 gi|433638148|ref|YP_007283908.1| - 0.011 15.8 0.0 0.021 14.9 0.0 1.4 1 0 0 1 1 1 0 RepB plasmid partitioning protein Sigma70_r4_2 PF08281.12 gi|433638148|ref|YP_007283908.1| - 0.019 14.6 0.8 0.049 13.3 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 P22_Cro PF14549.6 gi|433638148|ref|YP_007283908.1| - 0.023 14.5 0.0 0.055 13.3 0.0 1.6 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro HNF-1_N PF04814.13 gi|433638148|ref|YP_007283908.1| - 0.033 14.8 0.0 0.072 13.7 0.0 1.6 2 0 0 2 2 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus HTH_26 PF13443.6 gi|433638148|ref|YP_007283908.1| - 0.037 14.5 0.0 0.081 13.4 0.0 1.6 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_38 PF13936.6 gi|433638148|ref|YP_007283908.1| - 0.038 13.8 0.0 0.081 12.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|433638148|ref|YP_007283908.1| - 0.047 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_28 PF13518.6 gi|433638148|ref|YP_007283908.1| - 0.076 13.1 0.3 0.51 10.5 0.1 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain DUF3486 PF11985.8 gi|433638148|ref|YP_007283908.1| - 0.11 12.9 0.2 0.37 11.2 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3486) DCD PF06559.11 gi|433638149|ref|YP_007283909.1| - 5.5e-24 84.6 0.0 9.9e-14 50.9 0.0 2.0 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|433638149|ref|YP_007283909.1| - 1.3e-12 47.5 0.0 1.8e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 dUTPase PTH2 PF01981.16 gi|433638150|ref|YP_007283910.1| - 5.7e-40 136.3 0.0 6.3e-40 136.1 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Abhydrolase_2 PF02230.16 gi|433638151|ref|YP_007283911.1| - 5.8e-21 75.3 0.0 3.3e-20 72.8 0.0 1.8 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 gi|433638151|ref|YP_007283911.1| - 8.6e-07 28.7 0.0 1.1e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|433638151|ref|YP_007283911.1| - 8.9e-06 25.1 0.4 8.5e-05 21.9 0.1 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|433638151|ref|YP_007283911.1| - 7.8e-05 23.4 6.2 0.00068 20.3 0.9 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|433638151|ref|YP_007283911.1| - 0.00078 19.0 0.1 0.66 9.4 0.0 2.6 2 1 1 3 3 3 2 Prolyl oligopeptidase family FSH1 PF03959.13 gi|433638151|ref|YP_007283911.1| - 0.0011 18.7 0.0 0.0016 18.2 0.0 1.3 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_3 PF07859.13 gi|433638151|ref|YP_007283911.1| - 0.045 13.6 0.1 0.41 10.5 0.0 2.0 1 1 1 2 2 2 0 alpha/beta hydrolase fold LIP PF03583.14 gi|433638151|ref|YP_007283911.1| - 0.09 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Secretory lipase TruD PF01142.18 gi|433638152|ref|YP_007283912.1| - 2e-161 537.5 0.0 2.3e-161 537.3 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF2103 PF09876.9 gi|433638153|ref|YP_007283913.1| - 1.1e-38 131.2 0.3 2.3e-38 130.1 0.1 1.6 2 0 0 2 2 2 1 Predicted metal-binding protein (DUF2103) acVLRF1 PF18859.1 gi|433638153|ref|YP_007283913.1| - 0.12 12.7 3.2 0.31 11.3 0.2 2.4 2 1 0 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor SIP PF04954.13 gi|433638153|ref|YP_007283913.1| - 0.14 12.6 0.1 0.33 11.5 0.1 1.6 1 0 0 1 1 1 0 Siderophore-interacting protein zf-C3HC4_3 PF13920.6 gi|433638153|ref|YP_007283913.1| - 0.47 10.4 3.4 0.34 10.8 0.4 1.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Ribosomal_L37ae PF01780.19 gi|433638154|ref|YP_007283914.1| - 2.8e-23 81.8 0.4 3.5e-23 81.5 0.4 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family DUF4761 PF15958.5 gi|433638154|ref|YP_007283914.1| - 0.02 15.1 0.1 0.024 14.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) DNA_RNApol_7kD PF03604.13 gi|433638155|ref|YP_007283915.1| - 1.7e-10 40.4 6.3 2.1e-10 40.1 6.3 1.1 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 gi|433638155|ref|YP_007283915.1| - 3.8e-05 22.9 0.2 0.0044 16.4 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|433638155|ref|YP_007283915.1| - 0.0012 18.9 0.5 0.0012 18.8 0.5 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|433638155|ref|YP_007283915.1| - 0.0029 17.2 1.7 0.64 9.7 0.3 2.1 1 1 1 2 2 2 2 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS1595 PF12760.7 gi|433638155|ref|YP_007283915.1| - 0.0031 17.5 4.4 0.077 13.0 0.1 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|433638155|ref|YP_007283915.1| - 0.0051 16.5 0.9 0.28 11.0 2.3 2.0 1 1 1 2 2 2 2 A2L zinc ribbon domain zf-CHCC PF10276.9 gi|433638155|ref|YP_007283915.1| - 0.0053 16.8 0.4 0.0092 16.0 0.4 1.4 1 0 0 1 1 1 1 Zinc-finger domain Lar_restr_allev PF14354.6 gi|433638155|ref|YP_007283915.1| - 0.0077 16.6 0.4 0.075 13.4 0.0 1.9 1 1 1 2 2 2 1 Restriction alleviation protein Lar DZR PF12773.7 gi|433638155|ref|YP_007283915.1| - 0.0095 15.9 1.0 0.02 14.9 1.0 1.6 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433638155|ref|YP_007283915.1| - 0.013 15.2 2.1 0.17 11.6 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 gi|433638155|ref|YP_007283915.1| - 0.014 15.1 0.2 0.33 10.7 0.0 2.0 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Sgf11 PF08209.11 gi|433638155|ref|YP_007283915.1| - 0.015 14.8 1.7 0.99 9.0 0.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) RNHCP PF12647.7 gi|433638155|ref|YP_007283915.1| - 0.021 14.8 0.3 0.022 14.7 0.3 1.1 1 0 0 1 1 1 0 RNHCP domain Cys_rich_CPXG PF14255.6 gi|433638155|ref|YP_007283915.1| - 0.026 14.4 0.2 0.093 12.7 0.0 2.0 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-ISL3 PF14690.6 gi|433638155|ref|YP_007283915.1| - 0.027 15.1 2.2 0.1 13.3 0.2 2.0 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF951 PF06107.11 gi|433638155|ref|YP_007283915.1| - 0.045 13.7 1.3 2.6 8.0 0.1 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) Spt4 PF06093.13 gi|433638155|ref|YP_007283915.1| - 0.046 13.8 0.2 0.049 13.7 0.2 1.0 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger TF_Zn_Ribbon PF08271.12 gi|433638155|ref|YP_007283915.1| - 0.053 13.0 3.7 0.18 11.4 4.0 1.6 1 1 1 2 2 2 0 TFIIB zinc-binding zf-Di19 PF05605.12 gi|433638155|ref|YP_007283915.1| - 0.055 13.8 0.2 0.48 10.8 0.0 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Anti-TRAP PF15777.5 gi|433638155|ref|YP_007283915.1| - 0.055 13.4 0.1 0.062 13.3 0.1 1.2 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF3268 PF11672.8 gi|433638155|ref|YP_007283915.1| - 0.083 13.2 1.2 0.36 11.2 0.1 1.9 1 1 1 2 2 2 0 zinc-finger-containing domain TFIIS_C PF01096.18 gi|433638155|ref|YP_007283915.1| - 0.1 12.5 1.8 5.4 7.0 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Herpes_UL33 PF03581.13 gi|433638155|ref|YP_007283915.1| - 0.15 12.4 0.1 0.17 12.3 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL33-like protein Zn-ribbon_8 PF09723.10 gi|433638155|ref|YP_007283915.1| - 0.17 12.1 3.9 0.39 10.9 3.9 1.7 1 1 0 1 1 1 0 Zinc ribbon domain Thioredoxin_4 PF13462.6 gi|433638155|ref|YP_007283915.1| - 0.17 12.0 0.3 0.17 12.0 0.3 1.6 1 1 1 2 2 2 0 Thioredoxin CpXC PF14353.6 gi|433638155|ref|YP_007283915.1| - 0.19 11.8 1.3 0.74 9.9 1.3 1.8 1 1 0 1 1 1 0 CpXC protein OrfB_Zn_ribbon PF07282.11 gi|433638155|ref|YP_007283915.1| - 0.28 11.2 2.8 0.52 10.3 2.8 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.6 gi|433638155|ref|YP_007283915.1| - 0.49 10.4 5.8 20 5.2 5.8 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Pcc1 PF09341.10 gi|433638156|ref|YP_007283916.1| - 2.2e-10 40.5 1.5 2.4e-10 40.4 1.5 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 Prefoldin_2 PF01920.20 gi|433638157|ref|YP_007283917.1| - 6.3e-26 90.4 14.8 7e-26 90.3 14.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit ALIX_LYPXL_bnd PF13949.6 gi|433638157|ref|YP_007283917.1| - 1e-07 31.6 3.3 1.2e-07 31.4 3.3 1.0 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV DUF3584 PF12128.8 gi|433638157|ref|YP_007283917.1| - 0.00047 17.8 4.4 0.00055 17.6 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) FlaC_arch PF05377.11 gi|433638157|ref|YP_007283917.1| - 0.00062 20.1 3.5 0.00062 20.1 3.5 2.4 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) CLZ PF16526.5 gi|433638157|ref|YP_007283917.1| - 0.0027 18.0 3.1 0.0027 18.0 3.1 2.5 2 1 1 3 3 3 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels XhlA PF10779.9 gi|433638157|ref|YP_007283917.1| - 0.0075 16.4 1.4 0.0075 16.4 1.4 2.3 2 0 0 2 2 2 1 Haemolysin XhlA DUF2379 PF09543.10 gi|433638157|ref|YP_007283917.1| - 0.01 16.0 0.7 0.01 16.0 0.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2379) ERM PF00769.19 gi|433638157|ref|YP_007283917.1| - 0.014 15.2 11.3 0.018 14.8 11.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Prefoldin PF02996.17 gi|433638157|ref|YP_007283917.1| - 0.015 15.2 12.3 0.13 12.1 12.3 2.3 1 1 0 1 1 1 0 Prefoldin subunit CENP-F_leu_zip PF10473.9 gi|433638157|ref|YP_007283917.1| - 0.021 14.8 13.5 0.18 11.8 5.2 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AKNA PF12443.8 gi|433638157|ref|YP_007283917.1| - 0.023 15.4 2.9 0.023 15.4 2.9 1.9 2 1 0 2 2 2 0 AT-hook-containing transcription factor TarS_C1 PF18674.1 gi|433638157|ref|YP_007283917.1| - 0.03 14.3 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 TarS beta-glycosyltransferase C-terminal domain 1 DHR10 PF18595.1 gi|433638157|ref|YP_007283917.1| - 0.031 14.3 6.0 0.031 14.3 6.0 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain TPR_MLP1_2 PF07926.12 gi|433638157|ref|YP_007283917.1| - 0.05 13.7 17.4 0.36 10.9 5.7 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF5082 PF16888.5 gi|433638157|ref|YP_007283917.1| - 0.14 12.4 10.7 0.45 10.8 10.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Syntaxin-6_N PF09177.11 gi|433638157|ref|YP_007283917.1| - 0.15 12.6 7.5 0.5 10.9 7.5 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal CREPT PF16566.5 gi|433638157|ref|YP_007283917.1| - 0.15 12.2 5.3 0.21 11.8 5.3 1.1 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour MCU PF04678.13 gi|433638157|ref|YP_007283917.1| - 0.16 12.1 2.0 0.21 11.7 2.0 1.2 1 0 0 1 1 1 0 Mitochondrial calcium uniporter BRI3BP PF14965.6 gi|433638157|ref|YP_007283917.1| - 0.18 11.3 0.1 0.28 10.7 0.1 1.3 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF5344 PF17279.2 gi|433638157|ref|YP_007283917.1| - 0.25 11.9 7.9 2.5 8.8 7.3 2.4 1 1 0 1 1 1 0 Family of unknown function (DUF5344) BLOC1_2 PF10046.9 gi|433638157|ref|YP_007283917.1| - 0.28 11.5 8.0 3.6 7.9 1.1 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 WXG100 PF06013.12 gi|433638157|ref|YP_007283917.1| - 0.35 11.1 7.3 6.5 7.1 1.9 2.6 2 1 1 3 3 3 0 Proteins of 100 residues with WXG Laminin_II PF06009.12 gi|433638157|ref|YP_007283917.1| - 0.42 10.6 7.3 1 9.4 7.4 1.6 1 1 0 1 1 1 0 Laminin Domain II DUF1664 PF07889.12 gi|433638157|ref|YP_007283917.1| - 0.59 10.2 7.2 3.7 7.6 7.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 gi|433638157|ref|YP_007283917.1| - 0.59 10.4 11.9 0.25 11.6 1.4 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF724 PF05266.14 gi|433638157|ref|YP_007283917.1| - 0.65 9.8 10.0 0.84 9.4 10.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Sec34 PF04136.15 gi|433638157|ref|YP_007283917.1| - 0.81 9.6 7.2 0.64 9.9 1.3 2.1 1 1 1 2 2 2 0 Sec34-like family DUF4618 PF15397.6 gi|433638157|ref|YP_007283917.1| - 0.81 9.0 13.9 2.2 7.6 13.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) PRP1_N PF06424.12 gi|433638157|ref|YP_007283917.1| - 0.82 10.1 4.8 1.3 9.5 4.8 1.2 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal DUF4795 PF16043.5 gi|433638157|ref|YP_007283917.1| - 0.95 9.0 13.6 6.5 6.3 13.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Prominin PF05478.11 gi|433638157|ref|YP_007283917.1| - 0.95 7.3 2.9 1.1 7.1 2.9 1.0 1 0 0 1 1 1 0 Prominin FapA PF03961.13 gi|433638157|ref|YP_007283917.1| - 0.98 7.9 5.8 1.2 7.7 5.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF948 PF06103.11 gi|433638157|ref|YP_007283917.1| - 1.2 9.5 6.2 7 7.0 1.3 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HemX PF04375.14 gi|433638157|ref|YP_007283917.1| - 1.4 8.1 14.0 11 5.2 14.0 1.9 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4140 PF13600.6 gi|433638157|ref|YP_007283917.1| - 1.5 9.3 14.5 0.083 13.3 3.4 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF4407 PF14362.6 gi|433638157|ref|YP_007283917.1| - 1.5 8.1 7.9 20 4.4 8.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_13 PF13166.6 gi|433638157|ref|YP_007283917.1| - 1.5 7.3 7.1 1.9 7.0 7.1 1.1 1 0 0 1 1 1 0 AAA domain DUF2408 PF10303.9 gi|433638157|ref|YP_007283917.1| - 1.5 9.3 7.3 9.2 6.8 7.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) Spc24 PF08286.11 gi|433638157|ref|YP_007283917.1| - 2.2 8.5 16.1 0.93 9.8 5.2 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF3450 PF11932.8 gi|433638157|ref|YP_007283917.1| - 2.7 7.2 16.6 0.74 9.1 5.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) GIT_CC PF16559.5 gi|433638157|ref|YP_007283917.1| - 3.5 7.5 8.5 0.36 10.7 2.6 2.1 2 1 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor IFT57 PF10498.9 gi|433638157|ref|YP_007283917.1| - 3.8 6.4 12.1 0.84 8.5 2.9 2.0 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Fzo_mitofusin PF04799.13 gi|433638157|ref|YP_007283917.1| - 6.4 6.3 9.4 5.1 6.6 2.1 2.1 1 1 1 2 2 2 0 fzo-like conserved region Spc7 PF08317.11 gi|433638157|ref|YP_007283917.1| - 6.6 5.5 16.7 3.8 6.3 3.8 2.0 1 1 0 2 2 2 0 Spc7 kinetochore protein bZIP_Maf PF03131.17 gi|433638157|ref|YP_007283917.1| - 6.9 7.3 9.7 1.1 9.8 2.1 2.1 2 0 0 2 2 2 0 bZIP Maf transcription factor DMPK_coil PF08826.10 gi|433638157|ref|YP_007283917.1| - 9.3 6.5 20.2 1.5 8.9 4.0 2.8 2 1 1 3 3 3 0 DMPK coiled coil domain like ZapB PF06005.12 gi|433638157|ref|YP_007283917.1| - 9.5 6.7 16.8 0.96 9.9 5.1 2.2 2 0 0 2 2 2 0 Cell division protein ZapB DUF3194 PF11419.8 gi|433638158|ref|YP_007283918.1| - 2.4e-05 24.6 2.6 3.3e-05 24.1 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3194) DUF5489 PF17592.2 gi|433638159|ref|YP_007283919.1| - 0.0063 17.0 1.1 0.0073 16.8 1.1 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5489) MAP17 PF15807.5 gi|433638159|ref|YP_007283919.1| - 0.14 12.4 0.2 0.16 12.2 0.2 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 GATase PF00117.28 gi|433638160|ref|YP_007283920.1| - 4.2e-34 118.0 0.0 5.2e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433638160|ref|YP_007283920.1| - 4.5e-14 52.7 2.0 1.5e-12 47.7 0.4 2.8 1 1 1 2 2 2 1 Peptidase C26 AAA PF00004.29 gi|433638161|ref|YP_007283921.1| - 1.5e-44 151.6 0.1 1.5e-44 151.6 0.1 2.1 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|433638161|ref|YP_007283921.1| - 4.9e-13 48.7 1.8 1.4e-12 47.2 1.8 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|433638161|ref|YP_007283921.1| - 2.9e-08 34.0 0.0 1.1e-07 32.2 0.0 2.0 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|433638161|ref|YP_007283921.1| - 4.2e-07 29.8 0.0 1.1e-06 28.5 0.0 1.6 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|433638161|ref|YP_007283921.1| - 1.7e-06 28.1 0.4 2.1e-05 24.5 0.4 2.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|433638161|ref|YP_007283921.1| - 7.6e-06 26.2 0.5 0.0011 19.2 0.5 2.9 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|433638161|ref|YP_007283921.1| - 1.3e-05 25.6 2.5 0.011 16.1 0.0 2.7 2 1 0 2 2 2 2 AAA domain Prot_ATP_ID_OB PF16450.5 gi|433638161|ref|YP_007283921.1| - 2.4e-05 24.2 1.1 4.4e-05 23.3 0.3 1.9 2 0 0 2 2 1 1 Proteasomal ATPase OB C-terminal domain AAA_16 PF13191.6 gi|433638161|ref|YP_007283921.1| - 3.7e-05 24.2 5.4 0.00044 20.7 0.0 3.2 3 2 1 4 4 3 1 AAA ATPase domain AAA_18 PF13238.6 gi|433638161|ref|YP_007283921.1| - 0.00011 22.7 0.1 0.0018 18.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 gi|433638161|ref|YP_007283921.1| - 0.0008 18.9 0.4 0.0044 16.4 0.2 2.1 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|433638161|ref|YP_007283921.1| - 0.001 18.6 0.8 0.023 14.2 0.0 2.4 2 1 0 2 2 2 1 P-loop containing dynein motor region AAA_14 PF13173.6 gi|433638161|ref|YP_007283921.1| - 0.0013 18.8 0.6 0.0087 16.1 0.0 2.2 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|433638161|ref|YP_007283921.1| - 0.0013 18.5 0.2 0.045 13.5 0.2 2.7 1 1 0 1 1 1 1 Sigma-54 interaction domain Atg14 PF10186.9 gi|433638161|ref|YP_007283921.1| - 0.0016 17.6 2.0 0.0023 17.1 2.0 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 gi|433638161|ref|YP_007283921.1| - 0.002 17.8 9.4 0.002 17.8 9.4 1.8 2 0 0 2 2 1 1 GrpE NACHT PF05729.12 gi|433638161|ref|YP_007283921.1| - 0.0028 17.6 0.1 0.093 12.6 0.0 2.4 1 1 1 2 2 2 1 NACHT domain DUF815 PF05673.13 gi|433638161|ref|YP_007283921.1| - 0.0031 16.7 0.0 0.0064 15.7 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF815) TIP49 PF06068.13 gi|433638161|ref|YP_007283921.1| - 0.0038 16.5 2.4 0.0054 16.0 0.1 2.3 2 1 0 3 3 3 1 TIP49 P-loop domain RNA_helicase PF00910.22 gi|433638161|ref|YP_007283921.1| - 0.0044 17.4 0.0 0.011 16.1 0.0 1.7 1 0 0 1 1 1 1 RNA helicase AAA_33 PF13671.6 gi|433638161|ref|YP_007283921.1| - 0.0047 17.1 0.1 0.021 15.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|433638161|ref|YP_007283921.1| - 0.0047 17.2 0.3 0.02 15.2 0.0 2.3 2 0 0 2 2 1 1 AAA domain IstB_IS21 PF01695.17 gi|433638161|ref|YP_007283921.1| - 0.0056 16.4 0.0 0.013 15.3 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_24 PF13479.6 gi|433638161|ref|YP_007283921.1| - 0.006 16.3 3.0 0.007 16.1 0.1 2.5 3 1 0 3 3 3 1 AAA domain TniB PF05621.11 gi|433638161|ref|YP_007283921.1| - 0.0077 15.7 0.1 1.5 8.2 0.0 2.5 1 1 1 2 2 2 1 Bacterial TniB protein NB-ARC PF00931.22 gi|433638161|ref|YP_007283921.1| - 0.017 14.3 0.0 0.066 12.4 0.0 2.1 1 1 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 gi|433638161|ref|YP_007283921.1| - 0.018 14.4 6.6 0.21 10.9 0.0 3.4 2 1 1 3 3 3 0 KaiC AAA_3 PF07726.11 gi|433638161|ref|YP_007283921.1| - 0.018 14.9 0.1 0.072 12.9 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) GAS PF13851.6 gi|433638161|ref|YP_007283921.1| - 0.019 14.3 9.8 0.041 13.2 9.8 1.5 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Sigma54_activ_2 PF14532.6 gi|433638161|ref|YP_007283921.1| - 0.022 14.9 0.1 0.083 13.0 0.0 2.0 2 0 0 2 2 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 gi|433638161|ref|YP_007283921.1| - 0.025 13.7 0.0 0.055 12.6 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF4438 PF14505.6 gi|433638161|ref|YP_007283921.1| - 0.027 13.4 0.0 0.044 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4438) AAA_25 PF13481.6 gi|433638161|ref|YP_007283921.1| - 0.037 13.6 6.8 0.21 11.2 0.1 3.3 2 1 0 3 3 3 0 AAA domain TsaE PF02367.17 gi|433638161|ref|YP_007283921.1| - 0.038 14.0 0.0 0.078 13.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE bZIP_1 PF00170.21 gi|433638161|ref|YP_007283921.1| - 0.047 13.8 14.1 25 5.1 14.1 2.9 1 1 0 1 1 1 0 bZIP transcription factor ATPase_2 PF01637.18 gi|433638161|ref|YP_007283921.1| - 0.053 13.4 3.1 0.51 10.2 0.0 2.9 2 1 0 3 3 3 0 ATPase domain predominantly from Archaea Cep57_CLD_2 PF14197.6 gi|433638161|ref|YP_007283921.1| - 0.082 13.0 11.5 0.28 11.3 11.5 1.9 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF2334 PF10096.9 gi|433638161|ref|YP_007283921.1| - 0.087 12.5 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Bac_DnaA PF00308.18 gi|433638161|ref|YP_007283921.1| - 0.088 12.6 1.0 0.2 11.5 0.0 2.1 3 0 0 3 3 1 0 Bacterial dnaA protein Fungal_TACC PF12709.7 gi|433638161|ref|YP_007283921.1| - 0.12 12.8 6.9 0.11 12.9 5.0 1.9 2 0 0 2 2 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins NTPase_1 PF03266.15 gi|433638161|ref|YP_007283921.1| - 0.13 12.2 3.7 1.4 8.8 0.0 3.3 3 1 0 3 3 3 0 NTPase ABC_tran PF00005.27 gi|433638161|ref|YP_007283921.1| - 0.18 12.4 5.3 0.3 11.6 0.0 2.7 2 1 0 2 2 1 0 ABC transporter Fmp27_WPPW PF10359.9 gi|433638161|ref|YP_007283921.1| - 0.3 9.9 11.7 0.14 11.0 8.4 1.9 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain FlaC_arch PF05377.11 gi|433638161|ref|YP_007283921.1| - 1.2 9.6 7.6 46 4.5 0.0 3.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) FapA PF03961.13 gi|433638161|ref|YP_007283921.1| - 1.8 7.1 8.0 2.7 6.5 8.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A AAA_11 PF13086.6 gi|433638161|ref|YP_007283921.1| - 6.6 6.4 10.9 0.71 9.6 0.1 2.4 1 1 0 2 2 2 0 AAA domain APG6_N PF17675.1 gi|433638161|ref|YP_007283921.1| - 8 7.0 15.6 1.8 9.1 11.6 1.9 2 0 0 2 2 1 0 Apg6 coiled-coil region Swi5 PF07061.11 gi|433638161|ref|YP_007283921.1| - 9.4 6.4 9.6 8.4 6.6 6.7 2.4 1 1 1 2 2 2 0 Swi5 SlyX PF04102.12 gi|433638161|ref|YP_007283921.1| - 9.6 6.9 9.6 7.4 7.3 6.8 2.3 2 1 0 2 2 1 0 SlyX HTH_24 PF13412.6 gi|433638162|ref|YP_007283922.1| - 4.7e-07 29.3 0.0 6.6e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|433638162|ref|YP_007283922.1| - 0.00038 20.0 0.1 0.00055 19.5 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|433638162|ref|YP_007283922.1| - 0.00053 19.8 0.1 0.0007 19.4 0.1 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|433638162|ref|YP_007283922.1| - 0.0097 15.8 0.0 0.011 15.5 0.0 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|433638162|ref|YP_007283922.1| - 0.013 15.4 0.1 0.018 14.9 0.1 1.2 1 0 0 1 1 1 0 HTH domain MarR PF01047.22 gi|433638162|ref|YP_007283922.1| - 0.016 15.1 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 MarR family Sigma70_r4_2 PF08281.12 gi|433638162|ref|YP_007283922.1| - 0.018 14.7 0.1 0.035 13.8 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_20 PF12840.7 gi|433638162|ref|YP_007283922.1| - 0.028 14.5 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|433638162|ref|YP_007283922.1| - 0.06 13.5 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|433638162|ref|YP_007283922.1| - 0.081 13.3 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|433638162|ref|YP_007283922.1| - 0.082 12.9 0.0 0.097 12.7 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_54 PF18607.1 gi|433638162|ref|YP_007283922.1| - 0.09 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 ParA helix turn helix domain HTH_AsnC-type PF13404.6 gi|433638162|ref|YP_007283922.1| - 0.091 12.6 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_27 PF13463.6 gi|433638162|ref|YP_007283922.1| - 0.11 13.0 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Metallophos PF00149.28 gi|433638163|ref|YP_007283923.1| - 6.2e-12 46.4 0.3 9.7e-12 45.8 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|433638163|ref|YP_007283923.1| - 3.1e-11 43.7 0.1 7.3e-11 42.5 0.1 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain AAA_23 PF13476.6 gi|433638164|ref|YP_007283924.1| - 2.4e-16 60.8 78.9 3.4e-15 57.1 35.2 6.5 1 1 1 2 2 1 1 AAA domain SMC_N PF02463.19 gi|433638164|ref|YP_007283924.1| - 2.6e-12 46.7 41.1 2.1e-11 43.7 41.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|433638164|ref|YP_007283924.1| - 3.5e-12 46.7 1.2 3.5e-12 46.7 1.2 3.7 1 1 0 2 2 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|433638164|ref|YP_007283924.1| - 1.6e-10 41.3 10.3 1.6e-05 24.9 0.4 3.5 3 2 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system Spc7 PF08317.11 gi|433638164|ref|YP_007283924.1| - 5.8e-08 32.0 97.7 0.017 14.0 23.1 6.0 2 2 4 6 6 6 4 Spc7 kinetochore protein AAA_29 PF13555.6 gi|433638164|ref|YP_007283924.1| - 7.1e-07 28.9 0.0 1.3e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|433638164|ref|YP_007283924.1| - 1.8e-06 27.7 0.0 1.8e-06 27.7 0.0 5.9 5 1 3 8 8 7 1 AAA domain Atg14 PF10186.9 gi|433638164|ref|YP_007283924.1| - 2.1e-06 27.1 66.5 0.026 13.6 3.5 5.1 1 1 4 5 5 5 4 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_13 PF13166.6 gi|433638164|ref|YP_007283924.1| - 1.7e-05 23.7 62.6 0.035 12.8 1.0 4.7 2 1 3 5 5 5 4 AAA domain EzrA PF06160.12 gi|433638164|ref|YP_007283924.1| - 0.00038 18.8 64.7 0.01 14.0 7.9 3.5 2 1 1 3 3 3 2 Septation ring formation regulator, EzrA Baculo_PEP_C PF04513.12 gi|433638164|ref|YP_007283924.1| - 0.0018 18.3 17.5 0.62 10.1 0.3 5.8 4 2 2 6 6 6 2 Baculovirus polyhedron envelope protein, PEP, C terminus GAS PF13851.6 gi|433638164|ref|YP_007283924.1| - 0.0028 17.1 74.7 0.17 11.2 21.8 5.8 1 1 4 5 5 5 3 Growth-arrest specific micro-tubule binding FapA PF03961.13 gi|433638164|ref|YP_007283924.1| - 0.0045 15.7 50.8 0.036 12.7 5.0 5.2 1 1 2 5 5 5 3 Flagellar Assembly Protein A DUF4200 PF13863.6 gi|433638164|ref|YP_007283924.1| - 0.012 16.0 8.5 0.012 16.0 8.5 7.2 4 1 2 6 6 4 0 Domain of unknown function (DUF4200) HrpB7 PF09486.10 gi|433638164|ref|YP_007283924.1| - 0.014 15.8 27.8 0.014 15.8 27.8 7.6 2 2 4 6 6 4 0 Bacterial type III secretion protein (HrpB7) AAA_22 PF13401.6 gi|433638164|ref|YP_007283924.1| - 0.017 15.4 8.3 0.2 11.9 0.0 3.4 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|433638164|ref|YP_007283924.1| - 0.023 15.2 0.0 0.023 15.2 0.0 5.3 3 2 1 4 4 3 0 ABC transporter Viral_helicase1 PF01443.18 gi|433638164|ref|YP_007283924.1| - 0.029 14.1 0.0 0.071 12.8 0.0 1.7 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NACHT PF05729.12 gi|433638164|ref|YP_007283924.1| - 0.029 14.3 0.0 0.1 12.5 0.0 1.9 1 0 0 1 1 1 0 NACHT domain Hce2 PF14856.6 gi|433638164|ref|YP_007283924.1| - 0.055 13.8 0.2 0.32 11.3 0.0 2.2 2 0 0 2 2 2 0 Pathogen effector; putative necrosis-inducing factor MukB PF04310.12 gi|433638164|ref|YP_007283924.1| - 0.15 11.9 8.4 0.21 11.3 0.0 4.1 2 1 2 4 4 4 0 MukB N-terminal AAA_33 PF13671.6 gi|433638164|ref|YP_007283924.1| - 0.36 11.0 0.0 0.36 11.0 0.0 4.6 6 1 0 6 6 2 0 AAA domain DUF3584 PF12128.8 gi|433638164|ref|YP_007283924.1| - 0.38 8.2 99.4 0.19 9.2 25.4 4.2 2 1 2 4 4 4 0 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 gi|433638164|ref|YP_007283924.1| - 0.39 10.9 37.4 0.59 10.3 5.7 5.1 3 1 0 4 4 4 0 Fibrinogen alpha/beta chain family DUF4201 PF13870.6 gi|433638164|ref|YP_007283924.1| - 0.59 9.8 64.6 0.44 10.3 0.9 6.7 1 1 3 6 6 6 0 Domain of unknown function (DUF4201) IFT57 PF10498.9 gi|433638164|ref|YP_007283924.1| - 0.87 8.5 59.1 0.05 12.6 0.3 4.2 3 1 1 4 4 3 0 Intra-flagellar transport protein 57 FliD_N PF02465.18 gi|433638164|ref|YP_007283924.1| - 1.2 9.9 21.2 46 4.8 0.2 6.6 3 1 2 5 5 5 0 Flagellar hook-associated protein 2 N-terminus Laminin_II PF06009.12 gi|433638164|ref|YP_007283924.1| - 3.1 7.8 55.8 0.088 12.8 4.6 7.0 2 2 4 7 7 7 0 Laminin Domain II CENP-F_leu_zip PF10473.9 gi|433638164|ref|YP_007283924.1| - 3.2 7.8 105.2 3.3 7.7 15.5 6.5 2 2 2 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 gi|433638164|ref|YP_007283924.1| - 4 7.5 43.7 0.19 11.8 2.1 6.7 2 2 5 8 8 8 0 Protein of unknown function (DUF1664) ATP-synt_E_2 PF08112.11 gi|433638164|ref|YP_007283924.1| - 7.4 6.9 6.6 1.4 9.2 0.1 3.2 4 0 0 4 4 2 0 ATP synthase epsilon subunit 2TM PF13239.6 gi|433638166|ref|YP_007283926.1| - 2.1 8.7 4.9 3.1 8.2 4.9 1.2 1 0 0 1 1 1 0 2TM domain DNA_pol_B PF00136.21 gi|433638168|ref|YP_007283928.1| - 7.4e-46 156.8 0.0 1.1e-45 156.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|433638168|ref|YP_007283928.1| - 1.4e-29 103.3 0.0 3.2e-29 102.1 0.0 1.6 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 gi|433638168|ref|YP_007283928.1| - 0.024 13.5 0.0 0.43 9.4 0.0 2.4 3 0 0 3 3 3 0 DNA polymerase type B, organellar and viral ABC_tran PF00005.27 gi|433638169|ref|YP_007283929.1| - 1.5e-14 54.7 0.0 5.2e-14 52.9 0.0 1.8 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|433638169|ref|YP_007283929.1| - 2.2e-05 24.0 2.6 0.034 13.6 0.6 2.2 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|433638169|ref|YP_007283929.1| - 0.00017 22.0 0.0 0.16 12.4 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 gi|433638169|ref|YP_007283929.1| - 0.00021 21.2 0.7 0.032 14.1 0.7 2.5 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 gi|433638169|ref|YP_007283929.1| - 0.0036 17.3 0.0 3 7.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 gi|433638169|ref|YP_007283929.1| - 0.004 16.8 0.1 0.0077 16.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|433638169|ref|YP_007283929.1| - 0.0077 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|433638169|ref|YP_007283929.1| - 0.024 14.9 0.2 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|433638169|ref|YP_007283929.1| - 0.041 14.1 0.0 0.21 11.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|433638169|ref|YP_007283929.1| - 0.059 13.9 0.2 0.32 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|433638169|ref|YP_007283929.1| - 0.072 13.6 0.1 0.28 11.7 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_27 PF13514.6 gi|433638169|ref|YP_007283929.1| - 0.076 12.6 0.1 0.18 11.4 0.1 1.6 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|433638169|ref|YP_007283929.1| - 0.1 12.5 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain FAD-oxidase_C PF02913.19 gi|433638169|ref|YP_007283929.1| - 0.1 12.2 0.0 0.23 11.1 0.0 1.6 2 0 0 2 2 2 0 FAD linked oxidases, C-terminal domain UPF0051 PF01458.17 gi|433638170|ref|YP_007283930.1| - 1.5e-71 240.5 0.4 2e-71 240.2 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.17 gi|433638171|ref|YP_007283931.1| - 1.7e-64 217.5 0.9 2.1e-64 217.2 0.9 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Usp PF00582.26 gi|433638173|ref|YP_007283933.1| - 0.00049 20.6 1.5 0.016 15.7 0.3 2.4 2 1 0 2 2 2 1 Universal stress protein family 2-Hacid_dh_C PF02826.19 gi|433638173|ref|YP_007283933.1| - 0.075 12.4 0.1 0.22 10.9 0.1 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|433638173|ref|YP_007283933.1| - 0.41 10.5 1.7 1.2 9.0 0.2 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA_permease_2 PF13520.6 gi|433638174|ref|YP_007283934.1| - 9.5e-44 149.9 36.7 1.1e-43 149.6 36.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|433638174|ref|YP_007283934.1| - 8.7e-43 146.6 36.0 1.1e-42 146.3 36.0 1.1 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|433638174|ref|YP_007283934.1| - 4.3e-05 22.5 9.1 0.00013 21.0 9.1 1.7 1 1 0 1 1 1 1 Spore germination protein AA_permease_C PF13906.6 gi|433638174|ref|YP_007283934.1| - 2.7 8.1 8.2 0.45 10.6 2.9 2.6 2 0 0 2 2 2 0 C-terminus of AA_permease Herpes_UL14 PF03580.14 gi|433638175|ref|YP_007283935.1| - 0.02 15.1 0.4 0.036 14.3 0.4 1.4 1 0 0 1 1 1 0 Herpesvirus UL14-like protein DUF892 PF05974.12 gi|433638175|ref|YP_007283935.1| - 0.024 14.7 3.2 0.71 9.9 0.2 2.5 2 2 0 2 2 2 0 Domain of unknown function (DUF892) ANAPC16 PF17256.2 gi|433638175|ref|YP_007283935.1| - 0.034 14.5 1.1 0.46 10.9 0.1 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex, subunit 16 Ferritin PF00210.24 gi|433638175|ref|YP_007283935.1| - 0.066 13.1 3.8 0.11 12.4 0.3 2.4 1 1 2 3 3 3 0 Ferritin-like domain Ferritin_2 PF13668.6 gi|433638175|ref|YP_007283935.1| - 0.27 11.4 2.7 2.5 8.3 0.2 2.0 1 1 1 2 2 2 0 Ferritin-like domain COQ7 PF03232.13 gi|433638175|ref|YP_007283935.1| - 0.77 9.5 6.0 0.86 9.3 1.1 2.1 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DinB_2 PF12867.7 gi|433638175|ref|YP_007283935.1| - 0.95 10.0 5.3 19 5.8 2.4 2.2 1 1 0 2 2 2 0 DinB superfamily KfrA_N PF11740.8 gi|433638175|ref|YP_007283935.1| - 3.9 8.2 11.1 0.47 11.1 5.1 2.0 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term Fe_dep_repress PF01325.19 gi|433638176|ref|YP_007283936.1| - 5.9e-18 64.8 0.1 1.1e-17 63.9 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|433638176|ref|YP_007283936.1| - 2.6e-13 49.8 0.4 3.3e-12 46.3 0.4 2.0 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.7 gi|433638176|ref|YP_007283936.1| - 9.7e-06 25.4 0.0 1.9e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|433638176|ref|YP_007283936.1| - 2.7e-05 24.0 0.0 4.4e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|433638176|ref|YP_007283936.1| - 3.2e-05 24.3 0.0 5.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|433638176|ref|YP_007283936.1| - 0.00015 21.6 0.0 0.00023 21.0 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|433638176|ref|YP_007283936.1| - 0.00019 21.3 0.0 0.0003 20.6 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|433638176|ref|YP_007283936.1| - 0.0002 20.9 0.0 0.00035 20.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|433638176|ref|YP_007283936.1| - 0.0013 19.1 0.0 0.002 18.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 gi|433638176|ref|YP_007283936.1| - 0.0042 17.1 0.0 0.0099 15.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_12 PF08461.10 gi|433638176|ref|YP_007283936.1| - 0.015 15.2 0.1 0.027 14.4 0.1 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_IclR PF09339.10 gi|433638176|ref|YP_007283936.1| - 0.018 14.8 0.0 0.031 14.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain GntR PF00392.21 gi|433638176|ref|YP_007283936.1| - 0.029 14.0 0.0 0.07 12.8 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4423 PF14394.6 gi|433638176|ref|YP_007283936.1| - 0.04 13.6 0.0 0.061 13.0 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|433638176|ref|YP_007283936.1| - 0.041 14.0 0.0 0.083 13.0 0.0 1.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) FeoC PF09012.10 gi|433638176|ref|YP_007283936.1| - 0.092 12.8 1.0 0.13 12.3 0.0 1.7 2 0 0 2 2 1 0 FeoC like transcriptional regulator HTH_56 PF18662.1 gi|433638176|ref|YP_007283936.1| - 0.18 11.9 0.1 22 5.2 0.0 2.1 1 1 1 2 2 2 0 Cch helix turn helix domain DS PF01916.17 gi|433638176|ref|YP_007283936.1| - 0.19 11.0 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 Deoxyhypusine synthase Cu-oxidase_2 PF07731.14 gi|433638177|ref|YP_007283937.1| - 3.6e-24 85.1 1.9 3.6e-24 85.1 1.9 2.0 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_3 PF07732.15 gi|433638177|ref|YP_007283937.1| - 2.5e-10 40.4 0.0 0.0017 18.3 0.0 3.6 2 1 1 3 3 3 2 Multicopper oxidase TAT_signal PF10518.9 gi|433638177|ref|YP_007283937.1| - 0.0015 18.3 2.8 0.0024 17.6 2.8 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Cu-oxidase PF00394.22 gi|433638177|ref|YP_007283937.1| - 0.007 16.5 0.0 1 9.5 0.0 3.1 3 0 0 3 3 3 1 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|433638177|ref|YP_007283937.1| - 0.13 12.4 0.0 0.6 10.3 0.0 2.1 2 0 0 2 2 2 0 Cupredoxin-like domain MCPsignal PF00015.21 gi|433638178|ref|YP_007283938.1| - 1.1e-34 119.7 27.4 1.1e-34 119.7 27.4 6.2 3 1 4 7 7 7 4 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|433638178|ref|YP_007283938.1| - 1.7e-15 57.1 7.3 2.1e-12 47.2 0.4 4.5 4 1 0 4 4 3 2 HAMP domain dCache_1 PF02743.18 gi|433638178|ref|YP_007283938.1| - 9.5e-15 55.1 0.6 9.5e-15 55.1 0.6 4.0 2 1 2 4 4 4 1 Cache domain DUF948 PF06103.11 gi|433638178|ref|YP_007283938.1| - 3.7e-05 23.9 44.7 0.017 15.4 0.8 7.0 3 2 2 6 6 6 3 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 gi|433638178|ref|YP_007283938.1| - 0.0011 19.0 47.0 0.07 13.2 4.0 5.7 3 1 3 6 6 6 4 Laminin Domain II DUF1664 PF07889.12 gi|433638178|ref|YP_007283938.1| - 0.014 15.4 32.8 0.041 13.9 2.8 5.6 3 2 2 5 5 5 0 Protein of unknown function (DUF1664) DUF4131 PF13567.6 gi|433638178|ref|YP_007283938.1| - 0.072 12.7 0.1 0.23 11.1 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Alpha-2-MRAP_C PF06401.11 gi|433638178|ref|YP_007283938.1| - 0.31 11.0 20.4 0.011 15.7 8.3 3.5 1 1 2 3 3 3 0 Alpha-2-macroglobulin RAP, C-terminal domain DUF2935 PF11155.8 gi|433638178|ref|YP_007283938.1| - 0.96 9.8 12.0 5.4 7.4 0.3 4.9 3 2 1 4 4 4 0 Domain of unknown function (DUF2935) Serum_albumin PF00273.20 gi|433638178|ref|YP_007283938.1| - 1.6 8.5 5.0 1.9 8.2 0.8 2.5 2 0 0 2 2 2 0 Serum albumin family XH PF03469.14 gi|433638178|ref|YP_007283938.1| - 2.2 8.2 6.8 0.59 10.0 0.4 3.0 2 1 1 3 3 3 0 XH domain COG2 PF06148.11 gi|433638178|ref|YP_007283938.1| - 3.5 7.7 34.7 1.1 9.4 3.3 6.1 3 2 1 5 5 5 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF3584 PF12128.8 gi|433638178|ref|YP_007283938.1| - 4.1 4.8 52.0 0.57 7.6 41.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Prominin PF05478.11 gi|433638178|ref|YP_007283938.1| - 5.1 4.9 22.9 0.12 10.3 5.1 2.7 2 1 1 3 3 3 0 Prominin HMMR_N PF15905.5 gi|433638178|ref|YP_007283938.1| - 5.4 6.4 45.2 1.3 8.4 6.7 4.3 1 1 2 4 4 4 0 Hyaluronan mediated motility receptor N-terminal DUF2203 PF09969.9 gi|433638178|ref|YP_007283938.1| - 6.6 7.5 42.8 0.15 12.8 1.3 6.2 4 2 2 6 6 6 0 Uncharacterized conserved protein (DUF2203) MtrG PF04210.13 gi|433638178|ref|YP_007283938.1| - 9.6 6.1 7.1 6.7 6.7 0.4 3.6 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G Zip PF02535.22 gi|433638179|ref|YP_007283939.1| - 5.9e-15 55.3 9.8 5.9e-15 55.3 9.8 2.9 2 1 0 2 2 2 1 ZIP Zinc transporter Peptidase_M24 PF00557.24 gi|433638180|ref|YP_007283940.1| - 7.4e-62 208.7 0.6 1.9e-61 207.4 0.9 1.5 2 0 0 2 2 2 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|433638180|ref|YP_007283940.1| - 3.7e-24 85.9 0.0 6.4e-24 85.1 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain GCHY-1 PF02649.14 gi|433638181|ref|YP_007283941.1| - 1.8e-74 250.5 1.3 2e-74 250.4 1.3 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 REF PF05755.12 gi|433638181|ref|YP_007283941.1| - 0.09 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) TrmB PF01978.19 gi|433638182|ref|YP_007283942.1| - 9.4e-21 73.5 1.4 1.1e-20 73.2 0.2 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|433638182|ref|YP_007283942.1| - 0.02 14.1 0.0 0.034 13.3 0.0 1.3 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB PadR PF03551.14 gi|433638182|ref|YP_007283942.1| - 0.044 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_9 PF08221.11 gi|433638182|ref|YP_007283942.1| - 0.064 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Thioredox_DsbH PF03190.15 gi|433638183|ref|YP_007283943.1| - 4.4e-24 85.3 0.0 8.1e-24 84.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|433638183|ref|YP_007283943.1| - 7.5e-12 45.3 0.0 1.6e-11 44.2 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|433638183|ref|YP_007283943.1| - 9.3e-06 25.6 0.0 1.5e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433638183|ref|YP_007283943.1| - 4.6e-05 23.8 0.0 8.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|433638183|ref|YP_007283943.1| - 0.18 12.2 0.0 15 6.0 0.0 2.2 1 1 1 2 2 2 0 Thioredoxin-like FxsA PF04186.13 gi|433638184|ref|YP_007283944.1| - 6.5e-29 100.2 8.2 9e-29 99.8 8.2 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein Caroten_synth PF04240.12 gi|433638185|ref|YP_007283945.1| - 1.6e-63 214.4 15.3 2.2e-63 213.9 15.3 1.2 1 0 0 1 1 1 1 Carotenoid biosynthesis protein UbiA PF01040.18 gi|433638186|ref|YP_007283946.1| - 3.2e-25 88.9 19.2 4.2e-25 88.5 19.2 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family Amino_oxidase PF01593.24 gi|433638187|ref|YP_007283947.1| - 8.4e-33 114.3 1.2 3.2e-32 112.4 1.2 1.8 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|433638187|ref|YP_007283947.1| - 1.9e-18 66.4 0.1 6.1e-18 64.8 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|433638187|ref|YP_007283947.1| - 1.2e-09 38.2 1.6 2.2e-08 34.1 1.6 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|433638187|ref|YP_007283947.1| - 9.1e-07 28.4 0.6 1.4e-05 24.5 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|433638187|ref|YP_007283947.1| - 2.9e-06 26.9 0.0 3.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|433638187|ref|YP_007283947.1| - 3e-06 26.6 0.7 6.5e-06 25.5 0.7 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|433638187|ref|YP_007283947.1| - 3.4e-06 27.5 0.2 4.8e-05 23.8 0.2 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|433638187|ref|YP_007283947.1| - 6.1e-05 22.4 0.1 0.00012 21.5 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|433638187|ref|YP_007283947.1| - 0.00071 18.4 0.0 0.024 13.4 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein UDPG_MGDP_dh_N PF03721.14 gi|433638187|ref|YP_007283947.1| - 0.0073 15.9 0.7 0.013 15.1 0.7 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 gi|433638187|ref|YP_007283947.1| - 0.0087 15.3 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|433638187|ref|YP_007283947.1| - 0.01 15.1 0.0 0.062 12.5 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|433638187|ref|YP_007283947.1| - 0.011 16.1 0.0 0.023 15.1 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding IlvN PF07991.12 gi|433638187|ref|YP_007283947.1| - 0.014 15.0 0.0 0.026 14.1 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain GIDA PF01134.22 gi|433638187|ref|YP_007283947.1| - 0.018 14.2 0.8 0.025 13.7 0.8 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A MCRA PF06100.11 gi|433638187|ref|YP_007283947.1| - 0.032 13.0 0.0 0.042 12.7 0.0 1.1 1 0 0 1 1 1 0 MCRA family DUF5589 PF17672.1 gi|433638187|ref|YP_007283947.1| - 0.04 13.8 0.0 0.09 12.7 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5589) AbiEii PF08843.11 gi|433638187|ref|YP_007283947.1| - 0.095 12.6 1.0 0.36 10.7 0.0 2.1 1 1 1 2 2 2 0 Nucleotidyl transferase AbiEii toxin, Type IV TA system NAD_binding_9 PF13454.6 gi|433638187|ref|YP_007283947.1| - 0.12 12.3 0.1 0.32 11.0 0.1 1.7 1 0 0 1 1 1 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|433638187|ref|YP_007283947.1| - 0.16 10.7 0.2 0.28 10.0 0.2 1.3 1 0 0 1 1 1 0 Tryptophan halogenase 3HCDH_N PF02737.18 gi|433638187|ref|YP_007283947.1| - 0.25 11.2 0.2 0.46 10.4 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SQS_PSY PF00494.19 gi|433638188|ref|YP_007283948.1| - 8.1e-57 192.7 7.7 1e-56 192.4 7.7 1.1 1 0 0 1 1 1 1 Squalene/phytoene synthase BAT PF15915.5 gi|433638189|ref|YP_007283949.1| - 1e-45 155.4 11.9 1e-45 155.4 11.9 3.2 4 1 0 4 4 4 1 GAF and HTH_10 associated domain PAS_9 PF13426.7 gi|433638189|ref|YP_007283949.1| - 2.2e-21 76.1 0.0 4.6e-21 75.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain HTH_10 PF04967.12 gi|433638189|ref|YP_007283949.1| - 1.5e-17 63.2 0.1 3.1e-17 62.1 0.1 1.6 1 0 0 1 1 1 1 HTH DNA binding domain PAS_3 PF08447.12 gi|433638189|ref|YP_007283949.1| - 7.2e-10 39.0 0.0 7.8e-09 35.7 0.0 2.3 2 0 0 2 2 2 1 PAS fold GAF_2 PF13185.6 gi|433638189|ref|YP_007283949.1| - 2.4e-09 37.6 1.4 2.4e-09 37.6 1.4 2.6 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|433638189|ref|YP_007283949.1| - 7.4e-09 35.6 0.0 1.6e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|433638189|ref|YP_007283949.1| - 3.2e-08 33.8 2.3 1.1e-06 28.8 0.1 3.0 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|433638189|ref|YP_007283949.1| - 4.7e-05 23.3 0.0 0.00015 21.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain GAF_3 PF13492.6 gi|433638189|ref|YP_007283949.1| - 0.0092 16.3 0.1 0.071 13.5 0.0 2.4 2 0 0 2 2 2 1 GAF domain OKR_DC_1_N PF03709.15 gi|433638189|ref|YP_007283949.1| - 0.044 14.1 0.0 0.19 12.0 0.0 2.1 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain HTH_Tnp_1_2 PF13022.6 gi|433638189|ref|YP_007283949.1| - 0.056 13.6 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase FleQ PF06490.11 gi|433638189|ref|YP_007283949.1| - 0.17 12.3 0.0 2.4 8.6 0.0 2.8 4 0 0 4 4 3 0 Flagellar regulatory protein FleQ Cu-oxidase_2 PF07731.14 gi|433638190|ref|YP_007283950.1| - 1.5e-30 105.7 13.8 2.2e-20 72.8 2.1 3.0 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase_3 PF07732.15 gi|433638190|ref|YP_007283950.1| - 1.8e-22 79.6 8.2 3e-19 69.2 1.7 2.6 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase PF00394.22 gi|433638190|ref|YP_007283950.1| - 7.8e-15 55.3 0.4 6.3e-14 52.4 0.0 2.0 2 0 0 2 2 2 1 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|433638190|ref|YP_007283950.1| - 0.0038 17.3 0.0 0.84 9.8 0.0 2.6 2 1 0 2 2 2 1 Cupredoxin-like domain UCR_Fe-S_N PF10399.9 gi|433638190|ref|YP_007283950.1| - 0.0079 15.5 2.9 0.014 14.7 2.9 1.3 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 gi|433638190|ref|YP_007283950.1| - 0.014 15.3 3.0 0.021 14.7 3.0 1.3 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence BLI1 PF17324.2 gi|433638192|ref|YP_007283952.1| - 0.11 13.2 0.0 0.17 12.5 0.0 1.3 1 0 0 1 1 1 0 BLOC-1 interactor 1 zf-ribbon_3 PF13248.6 gi|433638193|ref|YP_007283953.1| - 0.00099 18.4 2.0 0.054 12.9 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|433638193|ref|YP_007283953.1| - 0.0022 17.7 0.7 0.017 14.8 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.7 gi|433638193|ref|YP_007283953.1| - 0.0043 17.1 0.6 0.0078 16.2 0.6 1.5 1 1 0 1 1 1 1 Double zinc ribbon Terminase_GpA PF05876.12 gi|433638193|ref|YP_007283953.1| - 0.0089 14.6 0.1 0.0092 14.6 0.1 1.0 1 0 0 1 1 1 1 Phage terminase large subunit (GpA) zf_UBZ PF18439.1 gi|433638193|ref|YP_007283953.1| - 0.012 15.2 1.0 0.13 11.9 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FANCL_C PF11793.8 gi|433638193|ref|YP_007283953.1| - 0.03 14.5 0.0 4.4 7.5 0.0 2.1 2 0 0 2 2 2 0 FANCL C-terminal domain YhfH PF14149.6 gi|433638193|ref|YP_007283953.1| - 0.079 12.9 1.0 0.43 10.6 0.1 2.0 2 0 0 2 2 2 0 YhfH-like protein zf-Di19 PF05605.12 gi|433638193|ref|YP_007283953.1| - 0.085 13.2 0.3 0.13 12.6 0.3 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-ACC PF17848.1 gi|433638193|ref|YP_007283953.1| - 0.14 12.2 1.3 3.2 7.9 0.0 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain RecR PF02132.15 gi|433638193|ref|YP_007283953.1| - 0.2 11.3 3.8 0.91 9.1 3.8 1.8 1 1 0 1 1 1 0 RecR protein zf-TFIIB PF13453.6 gi|433638193|ref|YP_007283953.1| - 0.24 10.8 3.5 2.1 7.8 3.8 2.0 1 1 1 2 2 2 0 Transcription factor zinc-finger Rubredoxin_2 PF18073.1 gi|433638193|ref|YP_007283953.1| - 0.31 10.8 2.5 1 9.1 0.2 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF3797 PF12677.7 gi|433638193|ref|YP_007283953.1| - 0.33 10.9 3.6 1.4 8.9 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Zn-ribbon_8 PF09723.10 gi|433638193|ref|YP_007283953.1| - 0.65 10.2 5.7 4.2 7.6 0.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain Pyr_redox_2 PF07992.14 gi|433638194|ref|YP_007283954.1| - 2.8e-19 69.5 3.3 2e-11 43.7 2.2 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|433638194|ref|YP_007283954.1| - 5.9e-11 42.5 0.3 4.6e-06 26.4 0.1 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|433638194|ref|YP_007283954.1| - 1.8e-10 40.6 0.2 3.9e-05 23.0 0.0 2.7 1 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433638194|ref|YP_007283954.1| - 5.7e-10 38.5 0.0 0.0004 19.2 0.0 2.1 1 1 1 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 gi|433638194|ref|YP_007283954.1| - 4.3e-07 29.5 0.9 5.2e-05 22.7 0.0 2.0 1 1 1 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 gi|433638194|ref|YP_007283954.1| - 2e-06 27.2 1.0 0.00065 18.9 0.0 2.7 1 1 1 2 2 2 2 FAD binding domain GIDA PF01134.22 gi|433638194|ref|YP_007283954.1| - 8e-06 25.2 0.6 2.4e-05 23.6 0.0 1.9 2 1 1 3 3 3 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|433638194|ref|YP_007283954.1| - 3.8e-05 23.7 0.1 0.0099 15.9 0.1 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|433638194|ref|YP_007283954.1| - 7.3e-05 22.9 0.0 0.0002 21.5 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|433638194|ref|YP_007283954.1| - 0.00097 19.7 0.0 0.86 10.2 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|433638194|ref|YP_007283954.1| - 0.0093 15.4 0.0 0.016 14.6 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|433638194|ref|YP_007283954.1| - 0.016 14.5 0.0 0.034 13.5 0.0 1.6 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Amino_oxidase PF01593.24 gi|433638194|ref|YP_007283954.1| - 0.019 14.3 0.2 0.065 12.5 0.1 1.6 1 1 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|433638194|ref|YP_007283954.1| - 0.026 13.6 0.1 0.97 8.4 0.0 2.0 1 1 1 2 2 2 0 Lycopene cyclase protein Thi4 PF01946.17 gi|433638194|ref|YP_007283954.1| - 0.051 12.8 0.0 0.088 12.0 0.0 1.4 1 0 0 1 1 1 0 Thi4 family Sorb PF02208.16 gi|433638194|ref|YP_007283954.1| - 0.14 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Sorbin homologous domain Trp_halogenase PF04820.14 gi|433638194|ref|YP_007283954.1| - 0.17 10.7 1.5 4.5 6.0 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase HxlR PF01638.17 gi|433638195|ref|YP_007283955.1| - 3.1e-18 65.4 0.0 3.7e-18 65.2 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|433638195|ref|YP_007283955.1| - 3e-05 24.1 0.0 4e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|433638195|ref|YP_007283955.1| - 0.00019 21.3 0.1 0.00029 20.7 0.1 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|433638195|ref|YP_007283955.1| - 0.0028 17.5 0.1 0.0041 17.0 0.1 1.2 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|433638195|ref|YP_007283955.1| - 0.0053 16.7 0.0 0.0079 16.1 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|433638195|ref|YP_007283955.1| - 0.02 15.4 0.2 0.031 14.8 0.2 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|433638195|ref|YP_007283955.1| - 0.038 13.8 0.0 0.063 13.0 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) HTH_45 PF14947.6 gi|433638195|ref|YP_007283955.1| - 0.04 13.9 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DUF2250 PF10007.9 gi|433638195|ref|YP_007283955.1| - 0.049 13.7 0.2 8.8 6.5 0.1 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Replic_Relax PF13814.6 gi|433638195|ref|YP_007283955.1| - 0.061 13.4 0.0 0.08 13.0 0.0 1.3 1 0 0 1 1 1 0 Replication-relaxation Rrf2 PF02082.20 gi|433638195|ref|YP_007283955.1| - 0.07 13.5 0.1 0.15 12.4 0.0 1.6 1 1 1 2 2 2 0 Transcriptional regulator TnsD PF15978.5 gi|433638195|ref|YP_007283955.1| - 0.077 12.0 0.1 0.081 11.9 0.1 1.0 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_5 PF01022.20 gi|433638195|ref|YP_007283955.1| - 0.1 12.5 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3006 PF11213.8 gi|433638196|ref|YP_007283956.1| - 0.0017 18.5 2.1 0.0028 17.8 2.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) FAD-oxidase_C PF02913.19 gi|433638197|ref|YP_007283957.1| - 3.5e-62 210.3 0.0 6.8e-62 209.3 0.0 1.5 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|433638197|ref|YP_007283957.1| - 6.8e-40 136.0 0.2 1.8e-39 134.7 0.2 1.8 1 0 0 1 1 1 1 FAD binding domain Fer4_8 PF13183.6 gi|433638197|ref|YP_007283957.1| - 4.6e-10 39.8 3.8 9.6e-10 38.8 3.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|433638197|ref|YP_007283957.1| - 3e-09 37.3 2.8 5.9e-09 36.3 2.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|433638197|ref|YP_007283957.1| - 2.6e-07 30.8 0.0 2.2e-05 24.6 0.1 2.6 2 0 0 2 2 2 1 Cysteine-rich domain Fer4_9 PF13187.6 gi|433638197|ref|YP_007283957.1| - 0.0012 19.0 1.1 0.07 13.3 0.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Cytokin-bind PF09265.10 gi|433638197|ref|YP_007283957.1| - 0.0043 16.5 0.0 0.0066 15.9 0.0 1.2 1 0 0 1 1 1 1 Cytokinin dehydrogenase 1, FAD and cytokinin binding Fer4_10 PF13237.6 gi|433638197|ref|YP_007283957.1| - 0.0056 16.8 6.1 0.092 12.9 1.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain FIST PF08495.10 gi|433638197|ref|YP_007283957.1| - 0.044 13.8 0.2 0.24 11.4 0.0 2.2 2 0 0 2 2 2 0 FIST N domain Fer4_7 PF12838.7 gi|433638197|ref|YP_007283957.1| - 0.074 13.6 5.6 0.37 11.4 5.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|433638197|ref|YP_007283957.1| - 0.12 12.5 2.7 0.34 11.1 0.3 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|433638197|ref|YP_007283957.1| - 0.88 9.5 15.1 0.19 11.6 4.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|433638197|ref|YP_007283957.1| - 6.3 7.1 12.5 0.34 11.1 2.8 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain NTP_transferase PF00483.23 gi|433638198|ref|YP_007283958.1| - 5.6e-36 124.4 0.0 7e-36 124.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433638198|ref|YP_007283958.1| - 1.7e-11 44.7 0.0 2.3e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|433638198|ref|YP_007283958.1| - 0.042 13.6 0.0 0.068 12.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Diphthami_syn_2 PF01902.17 gi|433638199|ref|YP_007283959.1| - 1.7e-55 187.9 0.0 2.7e-55 187.3 0.0 1.3 1 1 0 1 1 1 1 Diphthamide synthase ThiI PF02568.14 gi|433638199|ref|YP_007283959.1| - 0.0011 18.6 0.0 0.0016 18.0 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|433638199|ref|YP_007283959.1| - 0.052 13.0 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC DUF373 PF04123.13 gi|433638200|ref|YP_007283960.1| - 5.1e-110 368.1 13.4 6.2e-110 367.8 13.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF373) EI24 PF07264.11 gi|433638200|ref|YP_007283960.1| - 1.8 8.8 8.6 11 6.3 8.7 2.0 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) 7TMR-DISM_7TM PF07695.11 gi|433638200|ref|YP_007283960.1| - 7 6.5 11.1 0.25 11.2 0.2 2.5 1 1 1 2 2 2 0 7TM diverse intracellular signalling HalOD1 PF18545.1 gi|433638201|ref|YP_007283961.1| - 3.3e-21 75.3 0.2 4.6e-21 74.9 0.2 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 Dor1 PF04124.12 gi|433638202|ref|YP_007283962.1| - 0.03 13.0 28.7 0.058 12.1 9.2 2.4 2 1 0 2 2 2 0 Dor1-like family YtxH PF12732.7 gi|433638202|ref|YP_007283962.1| - 0.48 11.0 31.2 1.8e+04 -16.0 31.2 5.0 1 1 0 1 1 1 0 YtxH-like protein DUF1771 PF08590.10 gi|433638202|ref|YP_007283962.1| - 0.5 10.8 34.6 0.28 11.6 6.7 5.5 3 2 2 5 5 5 0 Domain of unknown function (DUF1771) ocr PF08684.10 gi|433638202|ref|YP_007283962.1| - 1.3 9.5 6.0 0.3 11.5 1.4 2.3 2 1 1 3 3 3 0 DNA mimic ocr DUF948 PF06103.11 gi|433638202|ref|YP_007283962.1| - 1.4 9.2 12.4 4.7 7.5 0.7 3.3 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 gi|433638202|ref|YP_007283962.1| - 3.2 7.8 31.5 0.78 9.8 6.1 4.3 1 1 2 4 4 4 0 Laminin Domain II Glyco_hydro_2 PF00703.21 gi|433638204|ref|YP_007283964.1| - 2.3e-06 28.2 0.0 6.7e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 2 Pilus_CpaD PF09476.10 gi|433638204|ref|YP_007283964.1| - 0.0074 16.0 0.2 0.018 14.8 0.2 1.7 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) Glyco_hydro_2_N PF02837.18 gi|433638204|ref|YP_007283964.1| - 0.011 15.7 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 2, sugar binding domain Aconitase PF00330.20 gi|433638206|ref|YP_007283966.1| - 2.2e-167 557.7 0.0 2.8e-167 557.4 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|433638206|ref|YP_007283966.1| - 1.7e-41 141.6 0.0 2.8e-41 140.9 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain NAD_binding_10 PF13460.6 gi|433638207|ref|YP_007283967.1| - 7.9e-15 55.2 0.3 1.1e-14 54.7 0.3 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|433638207|ref|YP_007283967.1| - 2.2e-14 53.5 0.0 3.5e-14 52.9 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 gi|433638207|ref|YP_007283967.1| - 9.4e-08 32.3 0.4 1.5e-07 31.6 0.4 1.3 1 0 0 1 1 1 1 TrkA-N domain 3Beta_HSD PF01073.19 gi|433638207|ref|YP_007283967.1| - 2.1e-06 26.9 0.0 3.8e-06 26.1 0.0 1.4 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family UDPG_MGDP_dh_N PF03721.14 gi|433638207|ref|YP_007283967.1| - 4.1e-06 26.5 0.1 6.3e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 gi|433638207|ref|YP_007283967.1| - 1.7e-05 25.3 0.2 3e-05 24.5 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|433638207|ref|YP_007283967.1| - 2.1e-05 24.2 0.1 3.3e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA GDP_Man_Dehyd PF16363.5 gi|433638207|ref|YP_007283967.1| - 5.6e-05 22.7 0.0 0.00031 20.2 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF1731 PF08338.11 gi|433638207|ref|YP_007283967.1| - 0.0002 21.1 0.0 0.00062 19.6 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) RmlD_sub_bind PF04321.17 gi|433638207|ref|YP_007283967.1| - 0.0045 16.1 0.3 0.027 13.6 0.2 2.0 2 1 0 2 2 2 1 RmlD substrate binding domain NAD_binding_2 PF03446.15 gi|433638207|ref|YP_007283967.1| - 0.0056 16.9 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox PF00070.27 gi|433638207|ref|YP_007283967.1| - 0.0065 17.0 0.5 0.013 16.0 0.5 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GFO_IDH_MocA PF01408.22 gi|433638207|ref|YP_007283967.1| - 0.031 15.1 0.1 0.056 14.3 0.1 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.12 gi|433638207|ref|YP_007283967.1| - 0.055 13.0 0.1 0.083 12.5 0.1 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Rossmann-like PF10727.9 gi|433638207|ref|YP_007283967.1| - 0.057 13.3 0.5 0.11 12.4 0.5 1.5 1 0 0 1 1 1 0 Rossmann-like domain Pyr_redox_2 PF07992.14 gi|433638207|ref|YP_007283967.1| - 0.07 12.4 0.4 0.1 11.8 0.4 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PSCyt2 PF07583.11 gi|433638207|ref|YP_007283967.1| - 0.076 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) Sacchrp_dh_NADP PF03435.18 gi|433638207|ref|YP_007283967.1| - 0.085 13.1 0.4 0.52 10.6 0.3 2.0 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|433638207|ref|YP_007283967.1| - 0.13 12.2 0.2 0.21 11.5 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NmrA PF05368.13 gi|433638207|ref|YP_007283967.1| - 0.2 11.2 0.6 0.28 10.7 0.6 1.2 1 0 0 1 1 1 0 NmrA-like family DHH PF01368.20 gi|433638208|ref|YP_007283968.1| - 2e-10 40.8 0.0 3.1e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|433638208|ref|YP_007283968.1| - 4.9e-10 40.0 0.2 9e-10 39.1 0.2 1.4 1 0 0 1 1 1 1 DHHA1 domain HypA PF01155.19 gi|433638209|ref|YP_007283969.1| - 0.0018 18.3 0.7 0.0018 18.3 0.7 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 gi|433638209|ref|YP_007283969.1| - 0.0041 17.0 2.4 0.0069 16.3 2.4 1.4 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|433638209|ref|YP_007283969.1| - 0.0073 16.3 1.6 0.013 15.5 1.6 1.4 1 1 0 1 1 1 1 zinc-ribbons DZR PF12773.7 gi|433638209|ref|YP_007283969.1| - 0.011 15.7 2.2 0.017 15.2 2.2 1.4 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.6 gi|433638209|ref|YP_007283969.1| - 0.012 15.5 0.9 1.7 8.7 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal IBR PF01485.21 gi|433638209|ref|YP_007283969.1| - 0.012 15.8 0.6 0.016 15.5 0.6 1.1 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain A1_Propeptide PF07966.12 gi|433638209|ref|YP_007283969.1| - 0.02 14.7 0.1 0.033 14.1 0.1 1.4 1 0 0 1 1 1 0 A1 Propeptide PhnA_Zn_Ribbon PF08274.12 gi|433638209|ref|YP_007283969.1| - 0.026 14.5 0.3 0.026 14.5 0.3 1.9 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_9 PF14369.6 gi|433638209|ref|YP_007283969.1| - 0.03 14.6 2.0 0.061 13.6 2.0 1.5 1 1 1 2 2 2 0 zinc-ribbon TFIIS_C PF01096.18 gi|433638209|ref|YP_007283969.1| - 0.045 13.6 3.2 0.28 11.1 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_5 PF13719.6 gi|433638209|ref|YP_007283969.1| - 0.065 13.0 1.2 4.3 7.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433638209|ref|YP_007283969.1| - 0.075 13.2 3.5 0.2 11.8 3.6 1.7 1 1 1 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|433638209|ref|YP_007283969.1| - 0.088 12.3 4.4 0.2 11.2 4.4 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zf_UBZ PF18439.1 gi|433638209|ref|YP_007283969.1| - 0.11 12.2 2.5 5.8 6.6 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger OrfB_Zn_ribbon PF07282.11 gi|433638209|ref|YP_007283969.1| - 0.16 11.9 3.2 0.83 9.6 3.3 1.8 1 1 0 1 1 1 0 Putative transposase DNA-binding domain CpXC PF14353.6 gi|433638209|ref|YP_007283969.1| - 0.23 11.5 4.0 1.4 9.0 0.2 2.1 1 1 1 2 2 2 0 CpXC protein DUF35_N PF12172.8 gi|433638209|ref|YP_007283969.1| - 0.36 10.8 4.0 5.9 6.9 0.1 2.9 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C2H2_3 PF13878.6 gi|433638209|ref|YP_007283969.1| - 2.6 7.9 5.1 5.7 6.8 0.3 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO MFS_1 PF07690.16 gi|433638210|ref|YP_007283970.1| - 1.2e-31 110.0 64.9 3.2e-27 95.4 47.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433638210|ref|YP_007283970.1| - 7.4e-08 31.6 10.1 7.4e-08 31.6 10.1 2.1 1 1 0 2 2 2 1 MFS_1 like family NUDIX PF00293.28 gi|433638213|ref|YP_007283973.1| - 2e-15 57.0 0.0 3.1e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Creatininase PF02633.14 gi|433638215|ref|YP_007283975.1| - 7.1e-67 225.4 5.2 8e-67 225.2 5.2 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DAO PF01266.24 gi|433638216|ref|YP_007283976.1| - 1e-55 189.7 8.8 1.2e-55 189.5 8.8 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433638216|ref|YP_007283976.1| - 7.8e-08 32.4 2.8 2.3e-07 31.0 2.8 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|433638216|ref|YP_007283976.1| - 1.9e-06 27.3 1.1 0.00039 19.7 0.4 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|433638216|ref|YP_007283976.1| - 3e-06 27.0 0.9 3e-06 27.0 0.9 1.6 2 0 0 2 2 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 gi|433638216|ref|YP_007283976.1| - 9.5e-05 22.4 0.4 0.00019 21.3 0.4 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|433638216|ref|YP_007283976.1| - 0.0004 20.9 0.2 0.0011 19.5 0.2 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433638216|ref|YP_007283976.1| - 0.00051 18.9 0.9 0.0036 16.0 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 gi|433638216|ref|YP_007283976.1| - 0.00096 18.3 1.6 0.00096 18.3 1.6 1.7 2 1 0 2 2 2 1 FAD binding domain 2-Hacid_dh_C PF02826.19 gi|433638216|ref|YP_007283976.1| - 0.007 15.7 0.2 0.013 14.8 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|433638216|ref|YP_007283976.1| - 0.012 15.2 0.8 0.025 14.1 0.2 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|433638216|ref|YP_007283976.1| - 0.013 15.9 0.1 0.027 14.9 0.1 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding ThiF PF00899.21 gi|433638216|ref|YP_007283976.1| - 0.016 14.5 0.4 0.031 13.6 0.4 1.4 1 0 0 1 1 1 0 ThiF family GIDA PF01134.22 gi|433638216|ref|YP_007283976.1| - 0.019 14.1 1.4 0.019 14.1 1.4 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|433638216|ref|YP_007283976.1| - 0.031 13.5 3.5 0.11 11.7 3.5 1.8 1 1 0 1 1 1 0 FAD binding domain Pyr_redox_3 PF13738.6 gi|433638216|ref|YP_007283976.1| - 0.038 13.2 0.6 0.1 11.8 0.2 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|433638216|ref|YP_007283976.1| - 0.055 13.6 0.3 0.13 12.4 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Thi4 PF01946.17 gi|433638216|ref|YP_007283976.1| - 0.089 12.0 2.9 0.076 12.2 0.9 1.8 2 0 0 2 2 2 0 Thi4 family Shikimate_DH PF01488.20 gi|433638216|ref|YP_007283976.1| - 0.16 12.0 0.0 7.9 6.5 0.0 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.23 gi|433638216|ref|YP_007283976.1| - 0.48 10.5 5.7 0.58 10.2 0.1 2.5 3 0 0 3 3 2 0 lactate/malate dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 gi|433638216|ref|YP_007283976.1| - 1.2 9.1 4.7 4.1 7.4 0.2 2.6 3 0 0 3 3 3 0 FAD-NAD(P)-binding F420_oxidored PF03807.17 gi|433638216|ref|YP_007283976.1| - 2.1 9.0 4.3 2.6 8.7 0.3 2.7 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent HSP20 PF00011.21 gi|433638217|ref|YP_007283977.1| - 9.3e-07 28.9 0.0 1.1e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family zf-ribbon_3 PF13248.6 gi|433638218|ref|YP_007283978.1| - 0.043 13.2 1.0 0.54 9.8 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF1178 PF06676.11 gi|433638218|ref|YP_007283978.1| - 0.081 13.3 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) DNA_ligase_ZBD PF03119.16 gi|433638218|ref|YP_007283978.1| - 0.083 12.9 3.8 7.5 6.7 0.0 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DUF35_N PF12172.8 gi|433638218|ref|YP_007283978.1| - 0.091 12.7 1.2 4.6 7.2 0.1 2.6 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Radical_SAM PF04055.21 gi|433638219|ref|YP_007283979.1| - 4.9e-15 56.3 0.0 1.3e-14 55.0 0.0 1.8 1 1 0 1 1 1 1 Radical SAM superfamily HHH_3 PF12836.7 gi|433638219|ref|YP_007283979.1| - 7.3e-06 26.1 0.0 1.8e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|433638219|ref|YP_007283979.1| - 6.1e-05 22.7 0.1 0.00039 20.2 0.1 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif PsbU PF06514.11 gi|433638219|ref|YP_007283979.1| - 0.0065 16.4 0.0 0.02 14.8 0.0 1.8 2 0 0 2 2 2 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_5 PF14520.6 gi|433638219|ref|YP_007283979.1| - 0.048 14.3 0.0 0.15 12.7 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain TRAM PF01938.20 gi|433638220|ref|YP_007283980.1| - 2.2e-14 53.2 3.3 3.3e-14 52.6 3.3 1.3 1 0 0 1 1 1 1 TRAM domain CxxCxxCC PF03692.15 gi|433638221|ref|YP_007283981.1| - 3.4e-12 46.9 0.1 1.2e-11 45.1 0.1 1.9 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Lactamase_B PF00753.27 gi|433638222|ref|YP_007283982.1| - 2.4e-17 63.6 9.0 3.4e-17 63.1 9.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433638222|ref|YP_007283982.1| - 1.3e-05 24.9 1.6 2e-05 24.2 1.6 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain BLACT_WH PF17778.1 gi|433638222|ref|YP_007283982.1| - 0.0044 17.0 0.0 0.0094 15.9 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase associated winged helix domain Lactamase_B_3 PF13483.6 gi|433638222|ref|YP_007283982.1| - 0.017 15.0 0.1 0.026 14.4 0.1 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain MarR_2 PF12802.7 gi|433638223|ref|YP_007283983.1| - 1.1e-05 25.2 0.2 3.1e-05 23.8 0.1 1.7 2 0 0 2 2 2 1 MarR family GntR PF00392.21 gi|433638223|ref|YP_007283983.1| - 0.00016 21.3 0.2 0.00024 20.7 0.2 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|433638223|ref|YP_007283983.1| - 0.0019 18.2 0.3 0.0071 16.4 0.3 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433638223|ref|YP_007283983.1| - 0.0041 16.7 0.0 0.01 15.4 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.17 gi|433638223|ref|YP_007283983.1| - 0.013 15.3 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit Peptidase_M28 PF04389.17 gi|433638223|ref|YP_007283983.1| - 0.019 14.7 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M28 TrmB PF01978.19 gi|433638223|ref|YP_007283983.1| - 0.024 14.5 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|433638223|ref|YP_007283983.1| - 0.033 14.1 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|433638223|ref|YP_007283983.1| - 0.047 13.6 0.0 0.072 13.0 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_27 PF13463.6 gi|433638223|ref|YP_007283983.1| - 0.058 13.9 0.0 0.094 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|433638223|ref|YP_007283983.1| - 0.1 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_12 PF08461.10 gi|433638223|ref|YP_007283983.1| - 0.15 12.1 0.1 0.37 10.8 0.1 1.8 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain Methyltransf_25 PF13649.6 gi|433638224|ref|YP_007283984.1| - 1.1e-24 86.9 0.1 1.8e-24 86.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638224|ref|YP_007283984.1| - 1.7e-23 83.1 0.1 2.5e-23 82.5 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638224|ref|YP_007283984.1| - 6e-20 71.6 0.0 7.4e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638224|ref|YP_007283984.1| - 3.6e-17 62.7 0.0 4.7e-17 62.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433638224|ref|YP_007283984.1| - 6.8e-16 58.3 0.0 8.4e-16 58.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|433638224|ref|YP_007283984.1| - 1.3e-14 54.8 0.0 2.1e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|433638224|ref|YP_007283984.1| - 5.8e-07 29.3 0.0 9.5e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW UPF0020 PF01170.18 gi|433638224|ref|YP_007283984.1| - 6.6e-06 25.9 0.0 5.2e-05 23.0 0.0 2.4 3 0 0 3 3 3 1 Putative RNA methylase family UPF0020 Methyltransf_9 PF08003.11 gi|433638224|ref|YP_007283984.1| - 9.8e-06 24.7 0.0 1.3e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|433638224|ref|YP_007283984.1| - 2.8e-05 23.6 0.0 3.7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|433638224|ref|YP_007283984.1| - 2.9e-05 23.6 0.0 3.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|433638224|ref|YP_007283984.1| - 4.7e-05 23.0 0.0 9.1e-05 22.1 0.0 1.4 2 0 0 2 2 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|433638224|ref|YP_007283984.1| - 8.2e-05 21.8 0.0 0.00011 21.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_15 PF09445.10 gi|433638224|ref|YP_007283984.1| - 0.00033 20.3 0.0 0.00043 19.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TPMT PF05724.11 gi|433638224|ref|YP_007283984.1| - 0.00036 20.3 0.0 0.00057 19.6 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|433638224|ref|YP_007283984.1| - 0.00084 19.4 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_20 PF12147.8 gi|433638224|ref|YP_007283984.1| - 0.0025 17.0 0.0 0.0035 16.6 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase PCMT PF01135.19 gi|433638224|ref|YP_007283984.1| - 0.0032 17.2 0.0 0.0057 16.4 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) tRNA_U5-meth_tr PF05958.11 gi|433638224|ref|YP_007283984.1| - 0.007 15.4 0.1 0.021 13.8 0.0 1.6 1 1 1 2 2 2 1 tRNA (Uracil-5-)-methyltransferase TehB PF03848.14 gi|433638224|ref|YP_007283984.1| - 0.0092 15.4 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|433638224|ref|YP_007283984.1| - 0.036 13.7 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 gi|433638224|ref|YP_007283984.1| - 0.047 13.6 0.0 0.069 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF938 PF06080.12 gi|433638224|ref|YP_007283984.1| - 0.074 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF938) FtsJ PF01728.19 gi|433638224|ref|YP_007283984.1| - 0.081 13.0 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Glycos_transf_2 PF00535.26 gi|433638225|ref|YP_007283985.1| - 3.2e-11 43.3 0.2 5.9e-11 42.5 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433638225|ref|YP_007283985.1| - 7.3e-06 26.0 0.2 1.2e-05 25.3 0.2 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|433638225|ref|YP_007283985.1| - 0.00012 21.7 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 ECH_1 PF00378.20 gi|433638226|ref|YP_007283986.1| - 9e-57 192.2 0.0 1.1e-56 192.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433638226|ref|YP_007283986.1| - 8.4e-25 88.0 0.0 7.4e-20 71.7 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Amidohydro_2 PF04909.14 gi|433638227|ref|YP_007283987.1| - 1.1e-11 45.0 0.0 4.4e-11 43.1 0.0 1.8 1 1 0 1 1 1 1 Amidohydrolase Cpn60_TCP1 PF00118.24 gi|433638228|ref|YP_007283988.1| - 4.2e-145 484.1 11.3 4.8e-145 483.9 11.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SAM_adeno_trans PF01887.16 gi|433638229|ref|YP_007283989.1| - 1.8e-70 237.1 0.2 2e-70 236.9 0.2 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase 3HCDH_N PF02737.18 gi|433638230|ref|YP_007283990.1| - 6.9e-58 195.5 0.0 9.1e-58 195.1 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|433638230|ref|YP_007283990.1| - 1.1e-32 112.5 0.0 3.4e-32 110.9 0.0 1.9 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|433638230|ref|YP_007283990.1| - 0.00081 19.6 0.0 0.0013 18.9 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|433638230|ref|YP_007283990.1| - 0.021 14.4 0.1 0.055 13.0 0.1 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433638230|ref|YP_007283990.1| - 0.042 13.2 0.1 0.069 12.5 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|433638230|ref|YP_007283990.1| - 0.042 13.8 0.0 0.07 13.1 0.0 1.4 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|433638230|ref|YP_007283990.1| - 0.12 13.0 2.9 0.21 12.2 1.1 2.4 2 1 1 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent SQS_PSY PF00494.19 gi|433638231|ref|YP_007283991.1| - 5.9e-50 170.2 3.3 7.1e-50 169.9 3.3 1.1 1 0 0 1 1 1 1 Squalene/phytoene synthase Imm2 PF14426.6 gi|433638231|ref|YP_007283991.1| - 0.072 13.2 0.1 0.2 11.7 0.1 1.8 1 0 0 1 1 1 0 Immunity protein Imm2 Acyl-CoA_dh_1 PF00441.24 gi|433638232|ref|YP_007283992.1| - 9.4e-50 168.7 0.4 1.3e-49 168.2 0.4 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433638232|ref|YP_007283992.1| - 2.9e-37 127.8 0.4 7.7e-37 126.4 0.1 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|433638232|ref|YP_007283992.1| - 1.4e-25 90.1 0.3 1.4e-25 90.1 0.3 1.5 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433638232|ref|YP_007283992.1| - 2.9e-22 78.7 0.0 5.5e-22 77.8 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain DAO PF01266.24 gi|433638233|ref|YP_007283993.1| - 1.4e-11 44.6 0.7 4.1e-05 23.3 0.1 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|433638233|ref|YP_007283993.1| - 1.1e-08 34.9 1.8 2.7e-08 33.6 1.8 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|433638233|ref|YP_007283993.1| - 2.8e-08 33.4 0.3 1.5e-07 31.0 0.3 2.0 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 gi|433638233|ref|YP_007283993.1| - 6.1e-08 32.1 0.0 2.7e-05 23.4 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|433638233|ref|YP_007283993.1| - 2.3e-06 26.7 0.0 0.0059 15.5 0.0 2.6 2 1 1 3 3 3 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 gi|433638233|ref|YP_007283993.1| - 3.6e-06 26.4 0.1 1.6e-05 24.3 0.0 1.8 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433638233|ref|YP_007283993.1| - 1.3e-05 24.5 0.0 0.0053 15.9 0.0 2.1 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|433638233|ref|YP_007283993.1| - 1.6e-05 24.2 0.4 7.5e-05 22.0 0.1 2.0 1 1 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|433638233|ref|YP_007283993.1| - 3.6e-05 22.7 0.0 0.0005 18.9 0.1 2.1 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|433638233|ref|YP_007283993.1| - 0.00013 21.3 0.1 0.0011 18.3 0.0 2.1 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|433638233|ref|YP_007283993.1| - 0.00061 20.0 0.0 0.0017 18.6 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|433638233|ref|YP_007283993.1| - 0.014 14.7 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|433638233|ref|YP_007283993.1| - 0.087 13.1 0.0 0.21 11.8 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain 3HCDH_N PF02737.18 gi|433638233|ref|YP_007283993.1| - 0.1 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PadR PF03551.14 gi|433638234|ref|YP_007283994.1| - 6e-07 29.3 0.0 8.4e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4364 PF14277.6 gi|433638234|ref|YP_007283994.1| - 0.0079 15.9 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_20 PF12840.7 gi|433638234|ref|YP_007283994.1| - 0.039 14.0 0.0 0.062 13.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1495 PF07381.11 gi|433638234|ref|YP_007283994.1| - 0.061 13.2 0.0 0.11 12.4 0.0 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) TrmB PF01978.19 gi|433638234|ref|YP_007283994.1| - 0.062 13.2 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|433638234|ref|YP_007283994.1| - 0.14 12.4 0.0 0.21 11.8 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain Glyco_tranf_2_4 PF13704.6 gi|433638235|ref|YP_007283995.1| - 0.14 12.7 0.0 0.17 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 UbiA PF01040.18 gi|433638236|ref|YP_007283996.1| - 1.2e-54 185.3 26.7 1.2e-54 185.3 26.7 2.6 2 1 0 2 2 2 1 UbiA prenyltransferase family COX15-CtaA PF02628.15 gi|433638236|ref|YP_007283996.1| - 3.4e-08 32.9 13.4 1.1e-05 24.7 0.7 3.8 2 2 1 3 3 3 2 Cytochrome oxidase assembly protein DUF4491 PF14898.6 gi|433638236|ref|YP_007283996.1| - 0.093 13.2 0.1 0.093 13.2 0.1 3.5 4 1 0 4 4 4 0 Domain of unknown function (DUF4491) Aldo_ket_red PF00248.21 gi|433638237|ref|YP_007283997.1| - 5.7e-71 239.1 0.0 6.4e-71 238.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family MORN PF02493.20 gi|433638237|ref|YP_007283997.1| - 4.2 7.5 5.3 2 8.5 0.6 2.7 2 0 0 2 2 2 0 MORN repeat DUF192 PF02643.15 gi|433638238|ref|YP_007283998.1| - 2e-25 88.8 0.0 2.5e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 TAT_signal PF10518.9 gi|433638238|ref|YP_007283998.1| - 0.16 11.9 0.5 0.16 11.9 0.5 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Bac_luciferase PF00296.20 gi|433638239|ref|YP_007283999.1| - 9.6e-51 173.1 2.3 1.2e-50 172.7 2.3 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase ABC_tran PF00005.27 gi|433638240|ref|YP_007284000.1| - 7.1e-28 97.8 0.0 1.3e-27 97.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638240|ref|YP_007284000.1| - 8.6e-15 55.3 0.2 7.2e-08 32.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|433638240|ref|YP_007284000.1| - 8.7e-07 28.9 0.0 2.7e-06 27.2 0.0 1.8 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|433638240|ref|YP_007284000.1| - 0.00014 21.5 0.3 0.00027 20.6 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433638240|ref|YP_007284000.1| - 0.00021 21.8 0.1 0.00032 21.3 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|433638240|ref|YP_007284000.1| - 0.00039 20.3 0.0 0.031 14.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain cobW PF02492.19 gi|433638240|ref|YP_007284000.1| - 0.0012 18.5 0.0 0.23 11.0 0.1 2.5 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain IstB_IS21 PF01695.17 gi|433638240|ref|YP_007284000.1| - 0.0046 16.7 0.0 0.18 11.5 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|433638240|ref|YP_007284000.1| - 0.0049 17.3 0.8 0.014 15.8 0.8 1.9 1 1 0 1 1 1 1 AAA ATPase domain TsaE PF02367.17 gi|433638240|ref|YP_007284000.1| - 0.0079 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|433638240|ref|YP_007284000.1| - 0.0084 16.4 0.8 0.038 14.2 0.2 2.5 2 1 1 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|433638240|ref|YP_007284000.1| - 0.0095 16.2 0.0 0.017 15.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|433638240|ref|YP_007284000.1| - 0.013 15.1 0.1 0.087 12.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|433638240|ref|YP_007284000.1| - 0.015 15.2 0.2 0.033 14.1 0.2 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|433638240|ref|YP_007284000.1| - 0.016 15.4 0.2 0.051 13.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|433638240|ref|YP_007284000.1| - 0.026 14.9 0.0 0.06 13.8 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|433638240|ref|YP_007284000.1| - 0.03 14.4 0.5 0.11 12.6 0.2 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase SMC_N PF02463.19 gi|433638240|ref|YP_007284000.1| - 0.038 13.4 0.1 0.19 11.1 0.1 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_18 PF13238.6 gi|433638240|ref|YP_007284000.1| - 0.059 13.9 0.1 0.53 10.8 0.1 2.1 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|433638240|ref|YP_007284000.1| - 0.063 13.2 0.0 3 7.7 0.1 2.3 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|433638240|ref|YP_007284000.1| - 0.082 12.8 0.1 0.5 10.3 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_27 PF13514.6 gi|433638240|ref|YP_007284000.1| - 0.1 12.2 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|433638240|ref|YP_007284000.1| - 0.1 12.5 0.0 0.52 10.2 0.0 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|433638240|ref|YP_007284000.1| - 0.11 12.2 0.0 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|433638240|ref|YP_007284000.1| - 0.21 11.2 0.0 0.37 10.4 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC2_membrane PF01061.24 gi|433638241|ref|YP_007284001.1| - 9.8e-25 87.2 10.4 1.3e-24 86.8 10.4 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|433638241|ref|YP_007284001.1| - 6.3e-13 48.6 4.1 6.3e-13 48.6 4.1 2.0 1 1 1 2 2 2 2 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|433638241|ref|YP_007284001.1| - 0.00062 19.1 10.6 0.00062 19.1 10.6 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein 12TM_1 PF09847.9 gi|433638241|ref|YP_007284001.1| - 0.0086 15.2 0.7 0.012 14.7 0.7 1.1 1 0 0 1 1 1 1 Membrane protein of 12 TMs DUF2070 PF09843.9 gi|433638241|ref|YP_007284001.1| - 1.7 6.9 7.2 2.1 6.5 7.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) OppC_N PF12911.7 gi|433638241|ref|YP_007284001.1| - 2.2 8.3 8.2 0.14 12.2 0.6 2.6 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DUF420 PF04238.12 gi|433638242|ref|YP_007284002.1| - 1e-36 126.1 8.6 1e-36 126.1 8.6 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF420) DUF2306 PF10067.9 gi|433638242|ref|YP_007284002.1| - 0.00053 20.2 7.1 0.024 14.8 0.1 2.3 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) Cytochrom_B561 PF03188.16 gi|433638242|ref|YP_007284002.1| - 0.054 13.6 10.9 0.07 13.3 5.3 2.1 1 1 1 2 2 2 0 Eukaryotic cytochrome b561 DUF3397 PF11877.8 gi|433638242|ref|YP_007284002.1| - 0.27 11.4 7.2 0.89 9.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3397) DUF2070 PF09843.9 gi|433638242|ref|YP_007284002.1| - 2.1 6.5 7.0 2.5 6.3 7.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DnaJ PF00226.31 gi|433638243|ref|YP_007284003.1| - 2.4e-09 37.2 0.0 4.7e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain DUF4690 PF15756.5 gi|433638243|ref|YP_007284003.1| - 0.36 11.5 3.7 3.1 8.5 0.2 2.5 2 1 0 2 2 2 0 Small Novel Rich in Cartilage NikR_C PF08753.11 gi|433638244|ref|YP_007284004.1| - 2.6e-22 78.7 1.0 4.1e-22 78.1 1.0 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|433638244|ref|YP_007284004.1| - 5.3e-07 29.3 0.1 9e-07 28.6 0.1 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|433638244|ref|YP_007284004.1| - 0.0012 18.7 0.0 0.0022 17.8 0.0 1.5 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 HicB_lk_antitox PF15919.5 gi|433638244|ref|YP_007284004.1| - 0.024 14.7 0.0 0.039 14.1 0.0 1.4 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system Arc PF03869.14 gi|433638244|ref|YP_007284004.1| - 0.13 12.1 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Arc-like DNA binding domain NadA PF02445.16 gi|433638245|ref|YP_007284005.1| - 9.6e-103 343.4 0.0 1.1e-102 343.3 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein FAD_binding_2 PF00890.24 gi|433638246|ref|YP_007284006.1| - 2.6e-76 257.4 4.2 3.1e-76 257.1 4.2 1.1 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|433638246|ref|YP_007284006.1| - 9.3e-09 34.8 0.8 2.8e-05 23.4 1.3 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A DAO PF01266.24 gi|433638246|ref|YP_007284006.1| - 1.1e-08 35.1 3.1 1.3e-07 31.6 0.7 2.6 1 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|433638246|ref|YP_007284006.1| - 1.5e-08 34.3 0.9 8.7e-05 21.9 0.7 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433638246|ref|YP_007284006.1| - 1.5e-05 23.9 0.5 0.12 11.1 0.7 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_oxidored PF12831.7 gi|433638246|ref|YP_007284006.1| - 1.6e-05 24.5 7.3 5.5e-05 22.7 7.3 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433638246|ref|YP_007284006.1| - 0.0036 17.5 0.5 0.009 16.2 0.5 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|433638246|ref|YP_007284006.1| - 0.0042 16.4 1.0 0.0073 15.6 1.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|433638246|ref|YP_007284006.1| - 0.0072 15.6 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|433638246|ref|YP_007284006.1| - 0.059 13.4 0.2 0.13 12.3 0.2 1.5 1 0 0 1 1 1 0 Fumarate reductase flavoprotein C-term Lycopene_cycl PF05834.12 gi|433638246|ref|YP_007284006.1| - 0.12 11.3 0.8 0.2 10.7 0.8 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein TAT_signal PF10518.9 gi|433638247|ref|YP_007284007.1| - 0.03 14.2 4.1 0.077 12.9 4.1 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence DUF4157 PF13699.6 gi|433638247|ref|YP_007284007.1| - 0.043 14.1 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) QRPTase_C PF01729.19 gi|433638248|ref|YP_007284008.1| - 7.2e-56 188.6 2.1 9.3e-56 188.2 2.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|433638248|ref|YP_007284008.1| - 1.1e-20 73.4 0.0 2.3e-20 72.4 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|433638248|ref|YP_007284008.1| - 0.0062 15.9 0.6 0.034 13.5 0.6 2.3 2 1 0 2 2 2 1 Ribulose-phosphate 3 epimerase family DUF4567 PF15131.6 gi|433638248|ref|YP_007284008.1| - 0.4 10.8 3.1 3.8 7.6 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4567) Aldedh PF00171.22 gi|433638250|ref|YP_007284010.1| - 4.1e-155 516.8 0.0 4.6e-155 516.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family 2-Hacid_dh_C PF02826.19 gi|433638251|ref|YP_007284011.1| - 1.5e-57 193.8 0.0 2.1e-57 193.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|433638251|ref|YP_007284011.1| - 6.2e-14 51.8 0.0 7e-14 51.6 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|433638251|ref|YP_007284011.1| - 5.5e-10 39.5 0.0 8.8e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 gi|433638251|ref|YP_007284011.1| - 1.3e-06 28.7 0.1 2.6e-06 27.7 0.0 1.5 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|433638251|ref|YP_007284011.1| - 7.4e-05 23.3 0.0 0.00014 22.4 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|433638251|ref|YP_007284011.1| - 0.0007 19.5 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433638251|ref|YP_007284011.1| - 0.0017 18.6 0.5 0.63 10.3 0.0 3.8 3 1 0 4 4 4 1 TrkA-N domain IlvN PF07991.12 gi|433638251|ref|YP_007284011.1| - 0.0067 16.0 0.0 0.027 14.1 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|433638251|ref|YP_007284011.1| - 0.012 15.7 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 gi|433638251|ref|YP_007284011.1| - 0.032 14.7 0.1 0.079 13.5 0.1 1.7 1 0 0 1 1 1 0 XdhC Rossmann domain ThiF PF00899.21 gi|433638251|ref|YP_007284011.1| - 0.036 13.4 1.0 0.036 13.4 1.0 1.6 2 0 0 2 2 2 0 ThiF family ApbA PF02558.16 gi|433638251|ref|YP_007284011.1| - 0.31 10.7 1.3 1.3 8.7 1.3 2.0 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Acetyltransf_10 PF13673.7 gi|433638252|ref|YP_007284012.1| - 1.5e-11 44.3 0.0 3.9e-11 43.0 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433638252|ref|YP_007284012.1| - 1.3e-07 31.8 0.0 1.8e-07 31.4 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433638252|ref|YP_007284012.1| - 1.6e-07 31.6 0.0 2.3e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433638252|ref|YP_007284012.1| - 0.085 12.9 0.0 1.1 9.3 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Cys_Met_Meta_PP PF01053.20 gi|433638253|ref|YP_007284013.1| - 1.3e-134 448.5 0.0 1.5e-134 448.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|433638253|ref|YP_007284013.1| - 2.5e-08 33.5 0.0 3.6e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|433638253|ref|YP_007284013.1| - 1.2e-05 24.8 0.2 7.1e-05 22.3 0.1 1.9 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|433638253|ref|YP_007284013.1| - 0.0015 17.5 0.0 0.0026 16.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|433638253|ref|YP_007284013.1| - 0.0076 15.6 0.0 0.016 14.5 0.0 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|433638253|ref|YP_007284013.1| - 0.036 12.8 0.0 0.047 12.4 0.0 1.2 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS HisKA_7TM PF16927.5 gi|433638254|ref|YP_007284014.1| - 3.4e-34 118.8 16.0 4.4e-34 118.4 16.0 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|433638254|ref|YP_007284014.1| - 6.5e-14 52.4 0.0 1.3e-13 51.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|433638254|ref|YP_007284014.1| - 2.8e-08 34.0 0.1 2.9e-06 27.5 0.0 2.8 2 1 0 2 2 2 1 PAS fold PAS PF00989.25 gi|433638254|ref|YP_007284014.1| - 7.2e-05 22.8 0.0 0.00053 20.0 0.0 2.3 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|433638254|ref|YP_007284014.1| - 0.00029 20.8 0.0 0.00058 19.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|433638254|ref|YP_007284014.1| - 0.0049 16.9 0.0 0.015 15.3 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 gi|433638254|ref|YP_007284014.1| - 0.0052 17.0 0.0 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 PAS domain HisKA PF00512.25 gi|433638254|ref|YP_007284014.1| - 0.0071 16.4 0.3 0.017 15.2 0.3 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain MLTR_LBD PF17765.1 gi|433638254|ref|YP_007284014.1| - 0.02 15.0 1.9 0.059 13.5 0.0 2.5 2 1 0 2 2 2 0 MmyB-like transcription regulator ligand binding domain HisKA_2 PF07568.12 gi|433638254|ref|YP_007284014.1| - 0.15 12.2 0.1 0.39 10.8 0.1 1.7 1 1 0 1 1 1 0 Histidine kinase Na_Ca_ex PF01699.24 gi|433638255|ref|YP_007284015.1| - 3.9e-46 156.8 33.3 6.6e-24 84.6 12.6 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Per1 PF04080.13 gi|433638255|ref|YP_007284015.1| - 4.4 7.0 5.3 1.1 8.9 0.9 1.9 2 0 0 2 2 2 0 Per1-like family Pyocin_S PF06958.12 gi|433638256|ref|YP_007284016.1| - 0.092 13.3 0.2 0.28 11.7 0.1 1.8 1 1 1 2 2 2 0 S-type Pyocin CHRD PF07452.12 gi|433638256|ref|YP_007284016.1| - 8.3 7.4 6.9 7.7 7.5 3.0 2.2 1 1 1 2 2 2 0 CHRD domain DUF839 PF05787.13 gi|433638257|ref|YP_007284017.1| - 6.8e-24 84.9 4.0 1.5e-18 67.2 1.2 3.7 2 1 1 3 3 3 3 Bacterial protein of unknown function (DUF839) EF-hand_7 PF13499.6 gi|433638257|ref|YP_007284017.1| - 0.0062 17.0 3.1 0.023 15.2 3.1 2.0 1 0 0 1 1 1 1 EF-hand domain pair TAT_signal PF10518.9 gi|433638257|ref|YP_007284017.1| - 0.025 14.4 1.5 0.044 13.6 1.5 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence EF-hand_6 PF13405.6 gi|433638257|ref|YP_007284017.1| - 0.27 11.3 8.3 4.6 7.4 1.5 3.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 gi|433638257|ref|YP_007284017.1| - 0.49 10.1 10.4 0.53 10.0 0.1 3.3 2 1 1 3 3 3 0 EF hand EF-hand_8 PF13833.6 gi|433638257|ref|YP_007284017.1| - 0.86 9.5 4.4 12 5.8 1.1 2.7 1 1 1 2 2 2 0 EF-hand domain pair Dockerin_1 PF00404.18 gi|433638257|ref|YP_007284017.1| - 9.1 6.6 11.3 9.6 6.5 9.6 2.0 1 1 0 1 1 1 0 Dockerin type I domain iPGM_N PF06415.13 gi|433638259|ref|YP_007284019.1| - 1.8e-77 259.7 0.1 2.4e-77 259.3 0.1 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|433638259|ref|YP_007284019.1| - 1.1e-68 231.3 0.0 1.3e-68 231.0 0.0 1.1 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|433638259|ref|YP_007284019.1| - 8.9e-06 25.5 0.0 2.7e-05 23.9 0.1 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|433638259|ref|YP_007284019.1| - 0.0024 18.0 0.0 0.0047 17.0 0.0 1.4 1 0 0 1 1 1 1 PglZ domain Sulfatase PF00884.23 gi|433638259|ref|YP_007284019.1| - 0.014 14.8 0.1 0.041 13.3 0.1 1.8 1 1 0 1 1 1 0 Sulfatase NurA PF09376.10 gi|433638260|ref|YP_007284020.1| - 9.4e-17 61.5 0.0 1.3e-16 61.1 0.0 1.2 1 0 0 1 1 1 1 NurA domain HTH_20 PF12840.7 gi|433638262|ref|YP_007284022.1| - 0.0041 17.1 10.5 0.047 13.8 2.0 3.1 2 1 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|433638262|ref|YP_007284022.1| - 0.0076 16.1 3.0 3.4 7.6 0.0 3.3 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|433638262|ref|YP_007284022.1| - 0.014 15.1 2.8 2.1 8.2 0.2 3.2 3 0 0 3 3 3 0 IclR helix-turn-helix domain DprA_WH PF17782.1 gi|433638262|ref|YP_007284022.1| - 0.023 14.8 2.8 0.05 13.7 0.3 2.6 2 0 0 2 2 2 0 DprA winged helix domain DUF87 PF01935.17 gi|433638263|ref|YP_007284023.1| - 5.4e-09 36.5 0.0 1e-08 35.6 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|433638263|ref|YP_007284023.1| - 1.5e-07 30.4 0.1 0.00041 19.1 0.1 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|433638263|ref|YP_007284023.1| - 0.0079 15.1 0.0 0.012 14.5 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain HAS-barrel PF09378.10 gi|433638263|ref|YP_007284023.1| - 0.011 15.9 0.0 0.037 14.2 0.0 2.0 1 0 0 1 1 1 0 HAS barrel domain AAA_22 PF13401.6 gi|433638263|ref|YP_007284023.1| - 0.013 15.8 0.0 0.055 13.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|433638263|ref|YP_007284023.1| - 0.016 14.3 0.0 0.029 13.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|433638263|ref|YP_007284023.1| - 0.018 15.5 0.0 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 gi|433638263|ref|YP_007284023.1| - 0.023 15.1 0.1 6.2 7.2 0.1 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 gi|433638263|ref|YP_007284023.1| - 0.026 14.3 0.0 0.68 9.7 0.0 2.2 1 1 0 1 1 1 0 DEAD/DEAH box helicase FtsK_SpoIIIE PF01580.18 gi|433638263|ref|YP_007284023.1| - 0.065 12.6 0.0 0.18 11.1 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|433638263|ref|YP_007284023.1| - 0.079 11.9 0.0 0.75 8.7 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain ResIII PF04851.15 gi|433638263|ref|YP_007284023.1| - 0.091 12.8 0.0 18 5.3 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit DUF3305 PF11749.8 gi|433638264|ref|YP_007284024.1| - 0.096 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) Trm56 PF01994.16 gi|433638265|ref|YP_007284025.1| - 1.5e-44 150.8 0.0 1.9e-44 150.4 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 TAT_signal PF10518.9 gi|433638266|ref|YP_007284026.1| - 0.0041 16.9 0.2 0.0059 16.4 0.2 1.2 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|433638266|ref|YP_007284026.1| - 0.071 12.5 0.1 0.12 11.7 0.1 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TFIIE_alpha PF02002.17 gi|433638267|ref|YP_007284027.1| - 1.8e-18 66.3 0.0 2.7e-18 65.8 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit Sigma70_r3 PF04539.16 gi|433638267|ref|YP_007284027.1| - 0.01 15.9 0.4 0.03 14.4 0.1 2.0 2 0 0 2 2 2 0 Sigma-70 region 3 Rad50_zn_hook PF04423.14 gi|433638267|ref|YP_007284027.1| - 0.029 14.2 0.5 0.2 11.5 0.0 2.4 3 0 0 3 3 3 0 Rad50 zinc hook motif Prok-RING_1 PF14446.6 gi|433638267|ref|YP_007284027.1| - 0.062 13.2 0.3 0.11 12.4 0.3 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf_UBZ PF18439.1 gi|433638267|ref|YP_007284027.1| - 0.072 12.7 0.7 4.9 6.8 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Ogr_Delta PF04606.12 gi|433638267|ref|YP_007284027.1| - 0.11 12.5 0.6 0.25 11.4 0.0 1.8 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-Mss51 PF13824.6 gi|433638267|ref|YP_007284027.1| - 0.12 12.5 1.3 0.34 11.1 1.0 2.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Tnp_22_trimer PF17489.2 gi|433638267|ref|YP_007284027.1| - 0.17 11.8 0.4 0.36 10.8 0.4 1.4 1 0 0 1 1 1 0 L1 transposable element trimerization domain DUF2110 PF09883.9 gi|433638268|ref|YP_007284028.1| - 3.4e-91 304.8 0.0 3.9e-91 304.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) UbiA PF01040.18 gi|433638269|ref|YP_007284029.1| - 0.12 11.6 0.1 0.83 8.9 0.0 1.9 2 0 0 2 2 2 0 UbiA prenyltransferase family RskA PF10099.9 gi|433638269|ref|YP_007284029.1| - 0.13 12.5 1.0 3.4 7.9 0.0 2.1 1 1 0 2 2 2 0 Anti-sigma-K factor rskA CheW PF01584.19 gi|433638270|ref|YP_007284030.1| - 2.4e-15 56.4 0.2 5e-15 55.3 0.2 1.6 2 0 0 2 2 2 1 CheW-like domain Response_reg PF00072.24 gi|433638271|ref|YP_007284031.1| - 9e-32 109.6 0.1 1e-31 109.4 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain PA PF02225.22 gi|433638271|ref|YP_007284031.1| - 0.048 13.7 0.1 0.19 11.8 0.1 1.8 1 1 1 2 2 2 0 PA domain B12-binding PF02310.19 gi|433638271|ref|YP_007284031.1| - 0.056 13.5 0.0 0.096 12.7 0.0 1.5 1 1 0 1 1 1 0 B12 binding domain CheB_methylest PF01339.17 gi|433638272|ref|YP_007284032.1| - 1.2e-53 181.3 2.4 6.8e-53 178.9 0.6 2.3 2 0 0 2 2 2 1 CheB methylesterase Response_reg PF00072.24 gi|433638272|ref|YP_007284032.1| - 1.1e-22 80.3 0.2 2.2e-22 79.3 0.2 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Hpt PF01627.23 gi|433638273|ref|YP_007284033.1| - 4.3e-19 68.6 0.2 1.9e-17 63.3 0.1 3.1 2 0 0 2 2 2 1 Hpt domain HATPase_c PF02518.26 gi|433638273|ref|YP_007284033.1| - 5.5e-18 65.5 0.1 1.1e-17 64.5 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CheW PF01584.19 gi|433638273|ref|YP_007284033.1| - 1.3e-10 41.0 0.8 2.2e-10 40.3 0.8 1.4 1 0 0 1 1 1 1 CheW-like domain HATPase_c_2 PF13581.6 gi|433638273|ref|YP_007284033.1| - 1.5e-06 28.2 0.5 3.9e-05 23.6 0.3 3.2 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain H-kinase_dim PF02895.14 gi|433638273|ref|YP_007284033.1| - 2e-05 24.9 2.5 6.9e-05 23.2 2.5 2.0 1 0 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain P2 PF07194.11 gi|433638273|ref|YP_007284033.1| - 9.3e-05 22.4 0.0 0.00028 20.9 0.0 1.8 1 0 0 1 1 1 1 P2 response regulator binding domain HATPase_c_5 PF14501.6 gi|433638273|ref|YP_007284033.1| - 0.019 14.9 0.0 0.039 13.8 0.0 1.4 1 0 0 1 1 1 0 GHKL domain HATPase_c_3 PF13589.6 gi|433638273|ref|YP_007284033.1| - 0.042 13.7 0.1 0.099 12.5 0.1 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CheC PF04509.12 gi|433638274|ref|YP_007284034.1| - 3.7e-11 42.7 0.0 6.9e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 CheC-like family CheX PF13690.6 gi|433638274|ref|YP_007284034.1| - 2.5e-05 24.4 0.0 4.4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Chemotaxis phosphatase CheX CheC PF04509.12 gi|433638275|ref|YP_007284035.1| - 3.3e-18 65.3 0.1 9.4e-13 47.8 0.0 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|433638275|ref|YP_007284035.1| - 2.6e-16 59.6 0.3 2.2e-08 34.2 0.0 2.3 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX CheD PF03975.13 gi|433638276|ref|YP_007284036.1| - 2.3e-31 108.1 0.0 2.9e-31 107.8 0.0 1.1 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheR PF01739.18 gi|433638277|ref|YP_007284037.1| - 2.2e-44 151.3 0.0 2.7e-44 151.0 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|433638277|ref|YP_007284037.1| - 3.4e-11 42.7 0.1 6.8e-11 41.7 0.1 1.5 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_12 PF08242.12 gi|433638277|ref|YP_007284037.1| - 2.3e-06 28.3 0.0 0.00029 21.5 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638277|ref|YP_007284037.1| - 1e-05 25.4 0.0 0.0024 17.7 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433638277|ref|YP_007284037.1| - 1.2e-05 25.9 0.0 0.01 16.5 0.0 2.4 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638277|ref|YP_007284037.1| - 0.00045 20.8 0.0 0.46 11.2 0.0 2.3 1 1 1 2 2 2 2 Methyltransferase domain DNA_pack_C PF02499.15 gi|433638277|ref|YP_007284037.1| - 0.063 12.2 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 Probable DNA packing protein, C-terminus T2SSF PF00482.23 gi|433638284|ref|YP_007284044.1| - 5.5e-30 103.9 9.7 9.7e-16 57.9 1.0 3.2 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F MnmE_helical PF12631.7 gi|433638284|ref|YP_007284044.1| - 0.08 13.1 1.1 0.11 12.6 0.1 1.6 2 0 0 2 2 2 0 MnmE helical domain T7SS_ESX_EspC PF10824.8 gi|433638284|ref|YP_007284044.1| - 0.28 11.7 1.9 0.58 10.7 0.3 2.3 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm Orf78 PF06024.12 gi|433638284|ref|YP_007284044.1| - 0.43 10.9 1.6 4.5 7.6 0.3 2.7 2 0 0 2 2 2 0 Orf78 (ac78) T3SSipB PF16535.5 gi|433638284|ref|YP_007284044.1| - 0.58 10.6 2.4 0.93 10.0 0.2 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB MgtE PF01769.16 gi|433638284|ref|YP_007284044.1| - 1.9 8.9 21.0 0.19 12.1 2.9 4.7 4 2 0 4 4 4 0 Divalent cation transporter T2SSE PF00437.20 gi|433638285|ref|YP_007284045.1| - 4.2e-41 140.8 0.0 6.8e-41 140.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|433638285|ref|YP_007284045.1| - 0.0054 16.5 0.1 0.012 15.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain TFCD_C PF12612.8 gi|433638285|ref|YP_007284045.1| - 0.12 12.1 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Tubulin folding cofactor D C terminal MttA_Hcf106 PF02416.16 gi|433638287|ref|YP_007284047.1| - 9.5e-14 50.5 0.0 1e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|433638287|ref|YP_007284047.1| - 0.048 14.6 0.0 0.06 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) HD PF01966.22 gi|433638288|ref|YP_007284048.1| - 7.6e-10 39.1 1.0 1.5e-09 38.1 1.0 1.6 1 0 0 1 1 1 1 HD domain DUF2384 PF09722.10 gi|433638288|ref|YP_007284048.1| - 0.12 12.4 0.2 1.5 8.9 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2384) DUF1427 PF07235.11 gi|433638289|ref|YP_007284049.1| - 0.00044 20.1 4.5 0.00052 19.9 4.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1427) FAD_binding_2 PF00890.24 gi|433638290|ref|YP_007284050.1| - 3.6e-119 398.6 7.2 3.6e-119 398.6 7.2 1.5 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|433638290|ref|YP_007284050.1| - 3.8e-37 127.1 0.1 6.3e-37 126.4 0.1 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|433638290|ref|YP_007284050.1| - 2.4e-09 36.9 6.5 0.0006 19.1 4.4 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433638290|ref|YP_007284050.1| - 0.00071 18.8 5.8 0.0008 18.6 4.9 1.5 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|433638290|ref|YP_007284050.1| - 0.0012 17.6 2.3 0.0012 17.6 2.3 1.8 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|433638290|ref|YP_007284050.1| - 0.0016 17.8 1.4 0.0031 16.8 1.4 1.5 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|433638290|ref|YP_007284050.1| - 0.0028 17.1 4.7 0.0028 17.1 4.7 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 gi|433638290|ref|YP_007284050.1| - 0.0058 16.2 7.7 0.044 13.4 6.5 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|433638290|ref|YP_007284050.1| - 0.006 15.8 2.3 0.062 12.5 0.5 2.4 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.6 gi|433638290|ref|YP_007284050.1| - 0.036 13.3 2.4 0.049 12.9 0.8 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|433638290|ref|YP_007284050.1| - 0.06 12.6 2.5 0.11 11.8 2.5 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|433638290|ref|YP_007284050.1| - 0.16 12.5 0.7 0.41 11.2 0.7 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Fer2_3 PF13085.6 gi|433638291|ref|YP_007284051.1| - 4.2e-33 113.6 0.4 1.1e-32 112.3 0.0 1.8 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|433638291|ref|YP_007284051.1| - 9e-13 48.5 3.2 9e-13 48.5 3.2 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|433638291|ref|YP_007284051.1| - 5.8e-08 32.7 3.3 1.4e-07 31.5 3.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|433638291|ref|YP_007284051.1| - 1.8e-05 25.2 2.8 1.8e-05 25.2 2.8 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|433638291|ref|YP_007284051.1| - 2.9e-05 24.5 3.2 6.5e-05 23.4 3.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433638291|ref|YP_007284051.1| - 0.00018 21.6 6.7 0.0011 19.0 6.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|433638291|ref|YP_007284051.1| - 0.0034 17.6 1.0 2.1 8.6 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|433638291|ref|YP_007284051.1| - 0.015 15.0 6.8 0.58 10.0 0.4 2.4 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.6 gi|433638291|ref|YP_007284051.1| - 0.034 15.1 5.6 0.034 15.1 5.6 2.5 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|433638291|ref|YP_007284051.1| - 0.11 12.7 3.9 0.36 11.0 0.9 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|433638291|ref|YP_007284051.1| - 0.55 10.9 8.7 0.94 10.1 2.4 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|433638291|ref|YP_007284051.1| - 2 8.4 9.8 6.2 6.8 3.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|433638291|ref|YP_007284051.1| - 3.5 8.8 11.9 2.1 9.5 0.4 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|433638291|ref|YP_007284051.1| - 5 7.4 7.6 8.2 6.7 2.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Sdh_cyt PF01127.22 gi|433638292|ref|YP_007284052.1| - 1.6e-10 41.0 9.0 1.8e-10 40.9 8.5 1.3 1 1 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdh_cyt PF01127.22 gi|433638293|ref|YP_007284053.1| - 2e-22 79.5 2.6 2.5e-22 79.2 2.6 1.1 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AstE_AspA PF04952.14 gi|433638294|ref|YP_007284054.1| - 1.4e-65 221.3 0.0 1.7e-65 221.0 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Acetyltransf_1 PF00583.25 gi|433638295|ref|YP_007284055.1| - 2e-12 47.4 0.0 3.5e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433638295|ref|YP_007284055.1| - 6.1e-10 39.1 0.0 1e-09 38.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638295|ref|YP_007284055.1| - 5.3e-09 36.4 0.0 9.7e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433638295|ref|YP_007284055.1| - 9.6e-05 22.3 0.0 0.00044 20.2 0.0 2.0 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|433638295|ref|YP_007284055.1| - 0.016 15.4 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433638295|ref|YP_007284055.1| - 0.037 14.1 0.1 0.15 12.1 0.1 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|433638295|ref|YP_007284055.1| - 0.043 13.5 0.0 0.083 12.6 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SmAKAP PF15127.6 gi|433638295|ref|YP_007284055.1| - 0.059 14.6 0.1 0.12 13.6 0.1 1.5 1 0 0 1 1 1 0 Small membrane A-kinase anchor protein Polysacc_synt_3 PF13440.6 gi|433638296|ref|YP_007284056.1| - 6.2e-25 88.0 1.3 6.2e-25 88.0 1.3 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|433638296|ref|YP_007284056.1| - 2.6e-21 76.3 12.1 2.6e-21 76.3 12.1 2.2 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433638296|ref|YP_007284056.1| - 6.3e-18 65.2 13.2 6.3e-18 65.2 13.2 3.8 4 0 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|433638296|ref|YP_007284056.1| - 2.3e-07 29.8 15.0 1.3e-06 27.3 14.9 2.3 1 1 0 1 1 1 1 Lipid II flippase MurJ RimK PF08443.11 gi|433638297|ref|YP_007284057.1| - 9.8e-24 84.0 0.0 1.6e-23 83.3 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Zn_protease PF05618.11 gi|433638297|ref|YP_007284057.1| - 1.9e-09 37.5 0.6 2.1e-07 30.9 0.1 2.3 1 1 1 2 2 2 1 Putative ATP-dependant zinc protease ATP-grasp_3 PF02655.14 gi|433638297|ref|YP_007284057.1| - 1.6e-07 31.5 0.0 4.3e-07 30.1 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|433638297|ref|YP_007284057.1| - 8.4e-07 28.5 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain gag-asp_proteas PF13975.6 gi|433638297|ref|YP_007284057.1| - 0.0002 21.9 0.1 0.00039 20.9 0.1 1.5 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 gi|433638297|ref|YP_007284057.1| - 0.0021 18.6 0.5 0.006 17.2 0.3 1.9 2 0 0 2 2 2 1 Aspartyl protease R2K_3 PF14243.6 gi|433638297|ref|YP_007284057.1| - 0.008 16.2 1.2 0.012 15.6 0.3 1.7 2 0 0 2 2 2 1 ATP-grasp domain, R2K clade family 3 DUF5488 PF17590.2 gi|433638297|ref|YP_007284057.1| - 0.03 14.1 0.0 0.072 12.8 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5488) ATPgrasp_YheCD PF14398.6 gi|433638297|ref|YP_007284057.1| - 0.24 10.6 0.0 0.6 9.3 0.0 1.7 1 1 0 1 1 1 0 YheC/D like ATP-grasp VIT1 PF01988.19 gi|433638298|ref|YP_007284058.1| - 2.4e-09 37.4 2.0 2.4e-09 37.4 2.0 2.0 2 0 0 2 2 2 1 VIT family DUF211 PF02680.14 gi|433638299|ref|YP_007284059.1| - 7.6e-34 115.7 0.4 8.4e-34 115.6 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 DUF1664 PF07889.12 gi|433638299|ref|YP_007284059.1| - 0.013 15.5 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TMEM215 PF15746.5 gi|433638300|ref|YP_007284060.1| - 0.0073 15.8 0.4 0.0083 15.6 0.4 1.0 1 0 0 1 1 1 1 TMEM215 family DUF2142 PF09913.9 gi|433638300|ref|YP_007284060.1| - 0.045 12.6 1.2 0.053 12.4 1.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) PrgI PF12666.7 gi|433638300|ref|YP_007284060.1| - 0.16 12.7 0.8 0.17 12.6 0.8 1.1 1 0 0 1 1 1 0 PrgI family protein MarC PF01914.17 gi|433638301|ref|YP_007284061.1| - 0.0002 20.8 0.8 0.00023 20.6 0.8 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein DUF2754 PF10953.8 gi|433638301|ref|YP_007284061.1| - 0.036 14.3 1.3 0.038 14.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) FeoB_associated PF12669.7 gi|433638301|ref|YP_007284061.1| - 0.55 10.7 1.3 1.7 9.1 0.1 1.9 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein COX1 PF00115.20 gi|433638302|ref|YP_007284062.1| - 3.8e-82 276.4 56.5 3.8e-82 276.4 56.5 1.9 1 1 1 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I COX2 PF00116.20 gi|433638303|ref|YP_007284063.1| - 4.3e-11 42.8 0.0 7.7e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 gi|433638303|ref|YP_007284063.1| - 1.8e-08 34.4 0.2 3.8e-07 30.2 0.0 2.5 2 1 0 2 2 2 1 Cupredoxin-like domain Big_3_5 PF16640.5 gi|433638303|ref|YP_007284063.1| - 0.00038 20.6 15.8 0.014 15.5 3.3 3.4 2 1 1 3 3 3 2 Bacterial Ig-like domain (group 3) A2M PF00207.22 gi|433638303|ref|YP_007284063.1| - 0.019 14.8 0.1 0.1 12.4 0.1 2.1 2 0 0 2 2 2 0 Alpha-2-macroglobulin family COX2-transmemb PF09125.10 gi|433638303|ref|YP_007284063.1| - 0.064 13.1 0.1 0.064 13.1 0.1 1.7 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane Transglut_C PF00927.22 gi|433638303|ref|YP_007284063.1| - 0.12 12.5 0.2 0.67 10.1 0.1 2.1 2 1 0 2 2 2 0 Transglutaminase family, C-terminal ig like domain DUF4402 PF14352.6 gi|433638303|ref|YP_007284063.1| - 0.24 12.0 7.6 0.83 10.3 7.2 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4402) Copper-bind PF00127.20 gi|433638303|ref|YP_007284063.1| - 0.27 11.7 4.7 0.96 9.9 0.7 3.1 2 1 0 2 2 2 0 Copper binding proteins, plastocyanin/azurin family DUF1616 PF07760.11 gi|433638303|ref|YP_007284063.1| - 0.27 10.6 3.6 0.44 9.9 3.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) FixG_C PF11614.8 gi|433638303|ref|YP_007284063.1| - 0.41 10.9 2.3 1.4 9.1 0.5 2.5 1 1 1 3 3 3 0 IG-like fold at C-terminal of FixG, putative oxidoreductase PCC_BT PF18140.1 gi|433638303|ref|YP_007284063.1| - 1.2 9.5 4.6 7 7.0 2.7 2.2 1 1 1 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain fn3_5 PF06280.12 gi|433638303|ref|YP_007284063.1| - 1.5 9.5 7.1 21 5.8 2.1 3.3 1 1 1 3 3 3 0 Fn3-like domain Cadherin-like PF12733.7 gi|433638303|ref|YP_007284063.1| - 4.5 7.9 10.5 9.9 6.8 9.0 2.4 2 1 0 2 2 2 0 Cadherin-like beta sandwich domain SPC25 PF06703.11 gi|433638304|ref|YP_007284064.1| - 0.0054 16.5 0.1 0.0054 16.5 0.1 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) RAMP4 PF06624.12 gi|433638304|ref|YP_007284064.1| - 0.13 12.4 0.1 0.21 11.7 0.0 1.5 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 Gp_dh_C PF02800.20 gi|433638305|ref|YP_007284065.1| - 9.6e-52 174.7 0.0 1.4e-51 174.2 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 gi|433638305|ref|YP_007284065.1| - 4.9e-33 113.5 0.0 1.1e-32 112.4 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|433638305|ref|YP_007284065.1| - 0.0022 18.1 0.0 0.0084 16.2 0.0 2.0 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.19 gi|433638305|ref|YP_007284065.1| - 0.025 13.9 0.0 0.041 13.2 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CitMHS PF03600.16 gi|433638306|ref|YP_007284066.1| - 6.8e-54 183.1 15.5 6.8e-54 183.1 15.5 1.7 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 gi|433638306|ref|YP_007284066.1| - 3.3e-28 98.9 37.8 7.3e-16 58.3 15.6 3.1 2 1 1 3 3 3 3 Sodium:sulfate symporter transmembrane region TrkA_C PF02080.21 gi|433638306|ref|YP_007284066.1| - 8.8e-18 63.9 1.4 2.2e-09 37.0 0.1 2.4 2 0 0 2 2 2 2 TrkA-C domain DUF2371 PF10177.9 gi|433638306|ref|YP_007284066.1| - 0.13 12.4 0.3 6.6 6.9 0.0 2.9 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) MatC_N PF07158.11 gi|433638306|ref|YP_007284066.1| - 5.3 7.1 33.8 0.35 10.9 5.3 2.4 2 0 0 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus PGK PF00162.19 gi|433638307|ref|YP_007284067.1| - 8.6e-97 324.4 0.0 1e-96 324.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase ADH_zinc_N PF00107.26 gi|433638308|ref|YP_007284068.1| - 1e-20 74.1 0.2 1.7e-20 73.3 0.2 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|433638308|ref|YP_007284068.1| - 6e-17 61.5 0.1 1.3e-16 60.4 0.1 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|433638308|ref|YP_007284068.1| - 9.7e-11 42.9 0.0 2.2e-10 41.7 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase E1-E2_ATPase PF00122.20 gi|433638309|ref|YP_007284069.1| - 4.1e-53 179.6 4.5 4.1e-53 179.6 4.5 2.5 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|433638309|ref|YP_007284069.1| - 4.3e-37 127.6 0.2 1.2e-36 126.1 0.2 1.7 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|433638309|ref|YP_007284069.1| - 7.7e-27 95.0 4.1 7.7e-27 95.0 4.1 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|433638309|ref|YP_007284069.1| - 9.6e-18 64.1 0.0 2.3e-17 62.9 0.0 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|433638309|ref|YP_007284069.1| - 1.7e-16 59.6 0.0 3.6e-16 58.6 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|433638309|ref|YP_007284069.1| - 7.1e-05 22.7 0.1 0.0016 18.2 0.1 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433638309|ref|YP_007284069.1| - 0.00047 20.6 1.7 0.00081 19.8 0.8 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Vut_1 PF02592.15 gi|433638309|ref|YP_007284069.1| - 0.045 14.1 5.1 0.61 10.4 0.5 2.6 2 0 0 2 2 2 0 Putative vitamin uptake transporter Tox-REase-3 PF15647.6 gi|433638309|ref|YP_007284069.1| - 0.14 12.4 0.2 0.38 11.1 0.0 1.7 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 3 Pyridox_ox_2 PF12900.7 gi|433638310|ref|YP_007284070.1| - 3.8e-20 72.3 0.0 4.3e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|433638310|ref|YP_007284070.1| - 0.16 12.2 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase AAA_26 PF13500.6 gi|433638311|ref|YP_007284071.1| - 7.6e-37 127.1 0.0 1.3e-36 126.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain DRTGG PF07085.12 gi|433638311|ref|YP_007284071.1| - 4.8e-30 103.4 0.2 1.3e-29 102.0 0.1 1.8 2 0 0 2 2 2 1 DRTGG domain CbiA PF01656.23 gi|433638311|ref|YP_007284071.1| - 1.1e-06 28.7 0.0 6.1e-06 26.3 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Hpr_kinase_N PF02603.16 gi|433638311|ref|YP_007284071.1| - 0.024 14.6 0.0 0.06 13.4 0.0 1.6 2 0 0 2 2 2 0 HPr Serine kinase N terminus ATP-grasp_5 PF13549.6 gi|433638312|ref|YP_007284072.1| - 8.9e-71 237.9 0.3 1.7e-70 236.9 0.3 1.5 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|433638312|ref|YP_007284072.1| - 8e-53 177.9 1.4 2.8e-52 176.2 0.9 2.1 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|433638312|ref|YP_007284072.1| - 1.4e-20 73.9 0.0 3.3e-19 69.5 0.0 3.1 3 0 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|433638312|ref|YP_007284072.1| - 2.7e-09 37.6 0.0 1.2e-08 35.6 0.0 2.2 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|433638312|ref|YP_007284072.1| - 0.041 13.4 0.0 0.093 12.3 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain GD_AH_C PF04295.13 gi|433638312|ref|YP_007284072.1| - 0.095 11.5 0.0 1.5 7.6 0.0 2.5 3 0 0 3 3 3 0 D-galactarate dehydratase / Altronate hydrolase, C terminus HhH-GPD PF00730.25 gi|433638313|ref|YP_007284073.1| - 4.2e-12 46.5 0.0 5.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.6 gi|433638313|ref|YP_007284073.1| - 0.19 12.4 0.0 0.33 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain SDF PF00375.18 gi|433638314|ref|YP_007284074.1| - 4.5e-111 371.6 39.5 5.1e-111 371.5 39.5 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DUF1358 PF07096.11 gi|433638314|ref|YP_007284074.1| - 0.0088 16.0 3.6 0.031 14.3 0.8 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1358) NOA36 PF06524.12 gi|433638315|ref|YP_007284075.1| - 5.5 6.2 12.9 6.6 6.0 12.9 1.1 1 0 0 1 1 1 0 NOA36 protein Acyl-CoA_dh_1 PF00441.24 gi|433638316|ref|YP_007284076.1| - 1.2e-52 178.1 3.0 2e-52 177.4 3.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433638316|ref|YP_007284076.1| - 9.1e-36 123.0 0.4 2.4e-35 121.6 0.2 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|433638316|ref|YP_007284076.1| - 1.5e-29 103.0 4.0 2.3e-29 102.4 4.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433638316|ref|YP_007284076.1| - 7.5e-25 87.0 0.0 1.4e-24 86.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain HpaB_N PF11794.8 gi|433638316|ref|YP_007284076.1| - 0.038 13.7 0.5 0.75 9.4 0.1 2.7 2 1 0 2 2 2 0 4-hydroxyphenylacetate 3-hydroxylase N terminal S-l_SbsC_C PF18316.1 gi|433638316|ref|YP_007284076.1| - 0.045 14.3 0.8 5 7.7 0.2 2.7 2 0 0 2 2 2 0 S-layer protein SbsC C-terminal domain 3HCDH_N PF02737.18 gi|433638317|ref|YP_007284077.1| - 1.4e-65 220.6 0.0 2.6e-65 219.7 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|433638317|ref|YP_007284077.1| - 8.1e-54 182.6 0.0 1.1e-53 182.1 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|433638317|ref|YP_007284077.1| - 3.9e-47 158.8 1.7 2.1e-32 111.6 0.1 3.5 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|433638317|ref|YP_007284077.1| - 6e-31 108.2 0.0 1.8e-27 96.7 0.0 2.3 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|433638317|ref|YP_007284077.1| - 2.7e-05 24.4 0.1 7.9e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|433638317|ref|YP_007284077.1| - 0.00058 19.9 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|433638317|ref|YP_007284077.1| - 0.00073 20.1 1.5 0.0046 17.5 1.5 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent MORN PF02493.20 gi|433638317|ref|YP_007284077.1| - 0.04 13.8 0.5 0.11 12.5 0.5 1.8 1 0 0 1 1 1 0 MORN repeat HalX PF08663.10 gi|433638318|ref|YP_007284078.1| - 2e-24 85.7 4.5 3.8e-24 84.8 4.5 1.5 1 0 0 1 1 1 1 HalX domain Response_reg PF00072.24 gi|433638318|ref|YP_007284078.1| - 1.7e-19 70.0 0.2 2.9e-19 69.3 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain AMP-binding PF00501.28 gi|433638319|ref|YP_007284079.1| - 2.3e-81 273.6 0.0 3.1e-81 273.2 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433638319|ref|YP_007284079.1| - 1.3e-15 58.1 0.3 3.9e-15 56.6 0.3 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MR_MLE_C PF13378.6 gi|433638320|ref|YP_007284080.1| - 1.6e-42 145.6 4.3 2.4e-42 145.0 4.3 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|433638320|ref|YP_007284080.1| - 0.0075 16.5 1.8 0.024 14.9 0.1 2.5 2 1 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UbiA PF01040.18 gi|433638321|ref|YP_007284081.1| - 2e-41 142.0 19.2 2.5e-41 141.7 19.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family ECH_1 PF00378.20 gi|433638322|ref|YP_007284082.1| - 1.4e-54 185.1 0.0 1.7e-54 184.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433638322|ref|YP_007284082.1| - 1.4e-12 47.7 0.0 2e-12 47.3 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DnaJ PF00226.31 gi|433638323|ref|YP_007284083.1| - 1.2e-19 70.1 0.5 1.1e-18 67.1 0.0 2.1 2 0 0 2 2 2 1 DnaJ domain TPP_enzyme_N PF02776.18 gi|433638324|ref|YP_007284084.1| - 8.2e-32 110.2 0.1 2.4e-31 108.7 0.1 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|433638324|ref|YP_007284084.1| - 3e-06 27.1 0.0 6.5e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433638324|ref|YP_007284084.1| - 0.0058 16.4 0.0 0.014 15.1 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Chorismate_bind PF00425.18 gi|433638325|ref|YP_007284085.1| - 6.9e-72 242.1 0.0 8.7e-72 241.8 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Oxidored_molyb PF00174.19 gi|433638326|ref|YP_007284086.1| - 1.1e-37 129.3 0.0 1.3e-37 129.0 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain IclR PF01614.18 gi|433638328|ref|YP_007284088.1| - 0.027 14.3 0.0 0.033 14.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional regulator His_biosynth PF00977.21 gi|433638330|ref|YP_007284090.1| - 8.4e-82 274.0 0.4 9.6e-82 273.9 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|433638330|ref|YP_007284090.1| - 2.3e-07 30.5 2.3 0.00044 19.7 0.2 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|433638330|ref|YP_007284090.1| - 8.2e-07 28.4 0.0 2.3e-05 23.7 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|433638330|ref|YP_007284090.1| - 1.4e-05 24.5 0.4 0.00041 19.7 0.1 2.2 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 gi|433638330|ref|YP_007284090.1| - 0.00058 19.2 0.3 0.0024 17.1 0.1 1.9 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase G3P_antiterm PF04309.12 gi|433638330|ref|YP_007284090.1| - 0.00073 19.0 0.1 0.0013 18.1 0.1 1.4 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator Glu_synthase PF01645.17 gi|433638330|ref|YP_007284090.1| - 0.011 14.9 0.1 0.017 14.3 0.1 1.2 1 0 0 1 1 1 0 Conserved region in glutamate synthase IMPDH PF00478.25 gi|433638330|ref|YP_007284090.1| - 0.031 13.3 0.0 0.055 12.5 0.0 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|433638330|ref|YP_007284090.1| - 0.043 12.9 0.4 0.069 12.2 0.4 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase TMP-TENI PF02581.17 gi|433638330|ref|YP_007284090.1| - 0.043 13.1 0.3 0.32 10.3 0.1 2.2 2 1 0 2 2 2 0 Thiamine monophosphate synthase PcrB PF01884.17 gi|433638330|ref|YP_007284090.1| - 0.11 12.0 0.1 0.19 11.2 0.1 1.4 1 0 0 1 1 1 0 PcrB family DUF561 PF04481.12 gi|433638330|ref|YP_007284090.1| - 0.18 10.9 0.0 11 5.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF561) RNA_pol_L_2 PF13656.6 gi|433638331|ref|YP_007284091.1| - 8.8e-17 60.7 0.0 1e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|433638331|ref|YP_007284091.1| - 9.4e-08 31.4 0.0 3e-07 29.8 0.0 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Rhomboid PF01694.22 gi|433638332|ref|YP_007284092.1| - 4.9e-08 33.1 10.9 4.9e-08 33.1 10.9 2.5 2 1 0 2 2 2 1 Rhomboid family MTS PF05175.14 gi|433638333|ref|YP_007284093.1| - 1.2e-11 44.5 0.0 1.5e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|433638333|ref|YP_007284093.1| - 2.8e-09 36.8 0.1 4e-09 36.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|433638333|ref|YP_007284093.1| - 2.1e-07 30.8 0.2 1e-06 28.6 0.2 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|433638333|ref|YP_007284093.1| - 1.3e-06 29.0 0.1 2.7e-06 28.0 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638333|ref|YP_007284093.1| - 5.6e-06 26.2 0.0 8.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|433638333|ref|YP_007284093.1| - 0.00061 19.5 0.0 0.00083 19.0 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|433638333|ref|YP_007284093.1| - 0.00063 20.4 0.0 0.0013 19.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|433638333|ref|YP_007284093.1| - 0.00063 19.5 0.0 0.00084 19.2 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 gi|433638333|ref|YP_007284093.1| - 0.00091 19.2 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638333|ref|YP_007284093.1| - 0.0044 16.9 0.0 0.0049 16.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638333|ref|YP_007284093.1| - 0.028 15.2 0.0 0.063 14.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433638333|ref|YP_007284093.1| - 0.071 12.4 0.0 0.14 11.5 0.0 1.4 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family DiSB-ORF2_chro PF16506.5 gi|433638333|ref|YP_007284093.1| - 0.089 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Putative virion glycoprotein of insect viruses AP_endonuc_2 PF01261.24 gi|433638334|ref|YP_007284094.1| - 0.0037 16.7 0.0 0.0044 16.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel zf-FPG_IleRS PF06827.14 gi|433638335|ref|YP_007284095.1| - 8.2e-05 22.4 1.0 0.00012 21.8 1.0 1.3 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS zf-TFIIB PF13453.6 gi|433638335|ref|YP_007284095.1| - 0.0025 17.1 2.2 0.0037 16.5 2.2 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|433638335|ref|YP_007284095.1| - 0.0098 16.0 3.3 0.06 13.5 3.4 2.0 1 1 0 1 1 1 1 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|433638335|ref|YP_007284095.1| - 0.015 14.8 0.4 0.029 13.9 0.4 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|433638335|ref|YP_007284095.1| - 0.024 14.6 1.0 0.024 14.6 1.0 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.7 gi|433638335|ref|YP_007284095.1| - 0.028 14.5 1.4 0.041 13.9 1.4 1.3 1 1 0 1 1 1 0 Double zinc ribbon Lar_restr_allev PF14354.6 gi|433638335|ref|YP_007284095.1| - 0.032 14.6 2.2 0.05 14.0 2.2 1.4 1 1 0 1 1 1 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.11 gi|433638335|ref|YP_007284095.1| - 0.04 13.8 0.5 0.06 13.3 0.5 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.12 gi|433638335|ref|YP_007284095.1| - 0.045 13.7 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 zinc-ribbons DNA_RNApol_7kD PF03604.13 gi|433638335|ref|YP_007284095.1| - 0.047 13.4 1.1 0.089 12.5 1.1 1.4 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit RNA_POL_M_15KD PF02150.16 gi|433638335|ref|YP_007284095.1| - 0.059 13.2 0.3 0.082 12.8 0.3 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit UPF0547 PF10571.9 gi|433638335|ref|YP_007284095.1| - 0.068 13.3 4.0 1.3 9.2 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_13 PF09855.9 gi|433638335|ref|YP_007284095.1| - 0.09 13.0 1.8 0.14 12.3 0.1 1.9 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-piccolo PF05715.13 gi|433638335|ref|YP_007284095.1| - 0.091 12.9 1.1 0.33 11.1 1.1 1.8 1 1 0 1 1 1 0 Piccolo Zn-finger DUF2688 PF10892.8 gi|433638335|ref|YP_007284095.1| - 0.25 10.8 2.7 1.6 8.2 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) zf_UBZ PF18439.1 gi|433638335|ref|YP_007284095.1| - 0.64 9.7 5.3 4.5 6.9 0.1 2.5 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_4 PF13717.6 gi|433638335|ref|YP_007284095.1| - 1.2 9.1 5.5 23 5.0 5.5 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|433638335|ref|YP_007284095.1| - 4.1 7.2 7.4 13 5.6 2.5 2.2 2 0 0 2 2 2 0 InsA N-terminal domain MreB_Mbl PF06723.13 gi|433638336|ref|YP_007284096.1| - 1.9e-05 23.7 0.0 0.061 12.1 0.0 2.4 2 1 0 2 2 2 2 MreB/Mbl protein Actin PF00022.19 gi|433638336|ref|YP_007284096.1| - 0.015 13.9 0.0 0.8 8.2 0.0 2.2 2 1 0 2 2 2 0 Actin FtsA PF14450.6 gi|433638336|ref|YP_007284096.1| - 0.016 15.6 0.0 0.093 13.2 0.0 2.0 2 0 0 2 2 2 0 Cell division protein FtsA Diphthamide_syn PF01866.17 gi|433638338|ref|YP_007284098.1| - 1.9e-77 260.7 0.0 2.3e-77 260.4 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein GTP-bdg_N PF13167.6 gi|433638338|ref|YP_007284098.1| - 0.05 14.3 0.0 1.6 9.5 0.0 2.6 2 1 1 3 3 3 0 GTP-binding GTPase N-terminal Lactamase_B_2 PF12706.7 gi|433638339|ref|YP_007284099.1| - 3.6e-21 75.6 0.2 4.6e-21 75.3 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433638339|ref|YP_007284099.1| - 3.4e-15 56.3 0.0 4.3e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433638339|ref|YP_007284099.1| - 0.11 12.5 9.6 0.5 10.3 9.0 2.1 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF1664 PF07889.12 gi|433638340|ref|YP_007284100.1| - 7.5e-08 32.5 9.3 0.0012 18.8 0.5 3.4 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) AAA_13 PF13166.6 gi|433638340|ref|YP_007284100.1| - 4.3e-06 25.7 6.2 7.8e-06 24.8 6.2 1.4 1 0 0 1 1 1 1 AAA domain BLOC1_2 PF10046.9 gi|433638340|ref|YP_007284100.1| - 1.3e-05 25.4 10.5 0.00087 19.5 2.0 3.4 1 1 2 3 3 3 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fib_alpha PF08702.10 gi|433638340|ref|YP_007284100.1| - 1.4e-05 25.3 3.8 0.00012 22.3 1.5 2.8 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family ATG16 PF08614.11 gi|433638340|ref|YP_007284100.1| - 1.9e-05 25.0 20.9 0.00037 20.8 3.8 2.7 1 1 2 3 3 3 2 Autophagy protein 16 (ATG16) NPV_P10 PF05531.12 gi|433638340|ref|YP_007284100.1| - 2.9e-05 24.4 18.2 0.16 12.4 0.5 5.6 2 1 3 5 5 4 1 Nucleopolyhedrovirus P10 protein MscS_porin PF12795.7 gi|433638340|ref|YP_007284100.1| - 3e-05 23.7 10.5 0.038 13.5 0.3 2.8 1 1 1 2 2 2 2 Mechanosensitive ion channel porin domain FPP PF05911.11 gi|433638340|ref|YP_007284100.1| - 4.6e-05 21.8 4.9 4.6e-05 21.8 4.9 2.1 1 1 1 2 2 2 1 Filament-like plant protein, long coiled-coil Laminin_II PF06009.12 gi|433638340|ref|YP_007284100.1| - 6.6e-05 23.0 11.9 0.0094 16.0 4.7 3.3 1 1 1 2 2 2 2 Laminin Domain II GAS PF13851.6 gi|433638340|ref|YP_007284100.1| - 7e-05 22.3 1.5 0.00014 21.3 0.4 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 gi|433638340|ref|YP_007284100.1| - 8.4e-05 21.6 11.7 0.00023 20.2 8.6 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein Tektin PF03148.14 gi|433638340|ref|YP_007284100.1| - 0.0001 21.2 2.3 0.00016 20.5 2.3 1.3 1 0 0 1 1 1 1 Tektin family Rx_N PF18052.1 gi|433638340|ref|YP_007284100.1| - 0.00022 21.4 10.9 0.17 12.2 0.4 4.1 2 1 2 4 4 4 2 Rx N-terminal domain EzrA PF06160.12 gi|433638340|ref|YP_007284100.1| - 0.00024 19.4 5.7 0.00024 19.4 5.7 1.5 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA SYCE1 PF15233.6 gi|433638340|ref|YP_007284100.1| - 0.00041 20.4 1.6 0.0007 19.7 1.6 1.4 1 0 0 1 1 1 1 Synaptonemal complex central element protein 1 Spc29 PF17082.5 gi|433638340|ref|YP_007284100.1| - 0.00042 20.2 1.4 0.078 12.8 0.1 2.5 1 1 1 2 2 2 1 Spindle Pole Component 29 Lebercilin PF15619.6 gi|433638340|ref|YP_007284100.1| - 0.00044 20.0 0.9 0.00072 19.3 0.6 1.4 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4795 PF16043.5 gi|433638340|ref|YP_007284100.1| - 0.00052 19.7 7.9 0.24 11.0 0.2 3.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4795) PspA_IM30 PF04012.12 gi|433638340|ref|YP_007284100.1| - 0.00057 19.5 2.6 0.0046 16.6 0.6 3.1 1 1 1 2 2 2 1 PspA/IM30 family FlaC_arch PF05377.11 gi|433638340|ref|YP_007284100.1| - 0.00068 20.0 27.1 0.13 12.6 0.8 5.8 2 1 4 6 6 5 1 Flagella accessory protein C (FlaC) Baculo_PEP_C PF04513.12 gi|433638340|ref|YP_007284100.1| - 0.00076 19.5 12.3 0.057 13.5 12.3 2.8 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Phage_GP20 PF06810.11 gi|433638340|ref|YP_007284100.1| - 0.00094 19.0 5.6 0.073 12.9 0.6 2.8 1 1 1 2 2 2 2 Phage minor structural protein GP20 ABC_tran_CTD PF16326.5 gi|433638340|ref|YP_007284100.1| - 0.00099 19.3 15.1 0.53 10.6 3.1 3.8 2 1 0 3 3 3 1 ABC transporter C-terminal domain ADIP PF11559.8 gi|433638340|ref|YP_007284100.1| - 0.0012 19.0 4.8 0.16 12.0 0.1 2.6 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Laminin_I PF06008.14 gi|433638340|ref|YP_007284100.1| - 0.0013 18.5 6.3 0.013 15.2 0.2 2.2 1 1 1 2 2 2 1 Laminin Domain I TMF_TATA_bd PF12325.8 gi|433638340|ref|YP_007284100.1| - 0.0016 18.7 15.7 0.11 12.7 9.8 3.5 1 1 2 3 3 3 2 TATA element modulatory factor 1 TATA binding Tropomyosin PF00261.20 gi|433638340|ref|YP_007284100.1| - 0.0019 17.6 12.7 0.0038 16.6 12.7 1.5 1 0 0 1 1 1 1 Tropomyosin DUF16 PF01519.16 gi|433638340|ref|YP_007284100.1| - 0.0024 18.3 5.5 0.27 11.8 2.1 2.7 1 1 1 2 2 2 1 Protein of unknown function DUF16 COG2 PF06148.11 gi|433638340|ref|YP_007284100.1| - 0.0027 17.8 10.2 0.02 15.0 2.8 3.0 2 1 1 3 3 2 1 COG (conserved oligomeric Golgi) complex component, COG2 ERM PF00769.19 gi|433638340|ref|YP_007284100.1| - 0.0028 17.5 1.2 0.0028 17.5 1.2 2.2 2 1 0 2 2 1 1 Ezrin/radixin/moesin family KxDL PF10241.9 gi|433638340|ref|YP_007284100.1| - 0.0028 17.9 0.1 1.6 9.0 0.1 3.3 1 1 2 3 3 3 0 Uncharacterized conserved protein Prefoldin_2 PF01920.20 gi|433638340|ref|YP_007284100.1| - 0.0028 17.6 9.3 0.13 12.2 3.0 3.6 2 1 1 3 3 2 2 Prefoldin subunit DUF885 PF05960.11 gi|433638340|ref|YP_007284100.1| - 0.0029 17.3 0.5 0.0042 16.8 0.5 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF885) Mod_r PF07200.13 gi|433638340|ref|YP_007284100.1| - 0.0047 17.0 6.6 0.63 10.1 0.3 2.5 1 1 1 2 2 2 2 Modifier of rudimentary (Mod(r)) protein TMPIT PF07851.13 gi|433638340|ref|YP_007284100.1| - 0.0052 16.1 3.6 0.022 14.0 1.8 2.1 1 1 2 3 3 3 2 TMPIT-like protein UPF0242 PF06785.11 gi|433638340|ref|YP_007284100.1| - 0.0052 16.9 6.2 0.011 15.9 6.1 1.7 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus TPR_MLP1_2 PF07926.12 gi|433638340|ref|YP_007284100.1| - 0.0053 16.8 11.2 0.22 11.6 1.4 3.0 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF724 PF05266.14 gi|433638340|ref|YP_007284100.1| - 0.0054 16.6 5.9 0.2 11.5 1.4 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF724) TMF_DNA_bd PF12329.8 gi|433638340|ref|YP_007284100.1| - 0.0054 16.7 14.0 0.079 13.0 2.3 3.4 2 1 1 3 3 2 2 TATA element modulatory factor 1 DNA binding TolA_bind_tri PF16331.5 gi|433638340|ref|YP_007284100.1| - 0.0056 16.7 7.1 1.4 9.1 3.0 3.2 1 1 1 3 3 3 0 TolA binding protein trimerisation DivIC PF04977.15 gi|433638340|ref|YP_007284100.1| - 0.0062 16.3 3.4 0.36 10.6 0.0 3.0 2 1 0 3 3 2 1 Septum formation initiator HMMR_N PF15905.5 gi|433638340|ref|YP_007284100.1| - 0.0071 15.9 7.5 0.0071 15.9 7.5 1.7 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Rab5-bind PF09311.11 gi|433638340|ref|YP_007284100.1| - 0.0072 15.8 10.1 0.38 10.1 2.9 2.4 1 1 1 2 2 2 2 Rabaptin-like protein Atg14 PF10186.9 gi|433638340|ref|YP_007284100.1| - 0.0081 15.3 0.9 0.023 13.8 0.9 1.7 1 1 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 TACC_C PF05010.14 gi|433638340|ref|YP_007284100.1| - 0.0082 16.0 5.3 0.0097 15.7 2.7 2.0 1 1 1 2 2 2 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Troponin PF00992.20 gi|433638340|ref|YP_007284100.1| - 0.0085 16.4 2.4 0.15 12.4 0.2 2.3 1 1 0 2 2 2 1 Troponin Filament PF00038.21 gi|433638340|ref|YP_007284100.1| - 0.0096 15.5 7.9 0.018 14.6 0.7 2.2 1 1 1 2 2 2 1 Intermediate filament protein YkyA PF10368.9 gi|433638340|ref|YP_007284100.1| - 0.012 15.3 5.0 0.012 15.3 5.0 1.9 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Rootletin PF15035.6 gi|433638340|ref|YP_007284100.1| - 0.012 15.7 3.0 0.023 14.7 3.0 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion SKA1 PF07160.12 gi|433638340|ref|YP_007284100.1| - 0.012 15.5 3.8 1.1 9.1 0.2 3.2 1 1 3 4 4 4 0 Spindle and kinetochore-associated protein 1 CENP-F_leu_zip PF10473.9 gi|433638340|ref|YP_007284100.1| - 0.012 15.6 16.6 0.11 12.5 2.7 2.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF812 PF05667.11 gi|433638340|ref|YP_007284100.1| - 0.013 14.5 18.5 0.11 11.4 18.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Sec34 PF04136.15 gi|433638340|ref|YP_007284100.1| - 0.015 15.2 12.5 0.095 12.6 2.8 3.1 2 1 1 3 3 3 0 Sec34-like family DUF3829 PF12889.7 gi|433638340|ref|YP_007284100.1| - 0.015 14.8 1.0 0.53 9.7 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3829) SlyX PF04102.12 gi|433638340|ref|YP_007284100.1| - 0.017 15.8 6.4 3.4 8.3 0.4 3.8 3 1 0 3 3 2 0 SlyX HrpB7 PF09486.10 gi|433638340|ref|YP_007284100.1| - 0.017 15.5 4.1 0.024 15.0 1.7 2.5 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) APG6_N PF17675.1 gi|433638340|ref|YP_007284100.1| - 0.017 15.6 17.2 0.14 12.7 8.0 2.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Med21 PF11221.8 gi|433638340|ref|YP_007284100.1| - 0.018 15.3 3.0 0.018 15.3 3.0 2.2 2 1 0 2 2 1 0 Subunit 21 of Mediator complex Spectrin PF00435.21 gi|433638340|ref|YP_007284100.1| - 0.018 15.5 7.1 0.84 10.2 4.1 2.8 1 1 1 2 2 2 0 Spectrin repeat Syntaxin-6_N PF09177.11 gi|433638340|ref|YP_007284100.1| - 0.023 15.2 5.0 0.023 15.2 5.0 3.8 2 1 1 4 4 2 0 Syntaxin 6, N-terminal DUF4200 PF13863.6 gi|433638340|ref|YP_007284100.1| - 0.024 15.0 0.9 27 5.2 0.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) BST2 PF16716.5 gi|433638340|ref|YP_007284100.1| - 0.027 15.0 6.0 0.19 12.3 0.2 3.0 1 1 1 3 3 2 0 Bone marrow stromal antigen 2 Snapin_Pallidin PF14712.6 gi|433638340|ref|YP_007284100.1| - 0.031 14.7 4.6 10 6.7 0.2 3.4 2 1 0 3 3 3 0 Snapin/Pallidin FH2 PF02181.23 gi|433638340|ref|YP_007284100.1| - 0.034 13.3 5.1 0.028 13.5 2.3 1.9 1 1 1 2 2 2 0 Formin Homology 2 Domain DUF3450 PF11932.8 gi|433638340|ref|YP_007284100.1| - 0.035 13.4 12.6 0.079 12.2 0.3 3.2 1 1 3 4 4 4 0 Protein of unknown function (DUF3450) HOOK PF05622.12 gi|433638340|ref|YP_007284100.1| - 0.039 12.1 10.4 0.057 11.6 9.0 1.7 1 1 0 1 1 1 0 HOOK protein Prefoldin PF02996.17 gi|433638340|ref|YP_007284100.1| - 0.043 13.7 8.3 3.9 7.4 0.0 4.2 2 1 1 4 4 3 0 Prefoldin subunit AIP3 PF03915.13 gi|433638340|ref|YP_007284100.1| - 0.043 12.9 11.9 0.078 12.1 11.7 1.5 1 1 0 1 1 1 0 Actin interacting protein 3 Prominin PF05478.11 gi|433638340|ref|YP_007284100.1| - 0.044 11.8 5.0 0.09 10.7 4.7 1.5 1 1 0 1 1 1 0 Prominin DUF3573 PF12097.8 gi|433638340|ref|YP_007284100.1| - 0.055 12.3 1.4 0.097 11.5 1.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) ZapB PF06005.12 gi|433638340|ref|YP_007284100.1| - 0.061 13.8 3.5 2.7 8.5 0.6 2.9 3 0 0 3 3 2 0 Cell division protein ZapB DUF4201 PF13870.6 gi|433638340|ref|YP_007284100.1| - 0.062 13.0 0.2 0.12 12.1 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) DUF4618 PF15397.6 gi|433638340|ref|YP_007284100.1| - 0.063 12.7 11.0 2.3 7.5 2.1 4.1 2 1 2 4 4 4 0 Domain of unknown function (DUF4618) DUF5082 PF16888.5 gi|433638340|ref|YP_007284100.1| - 0.068 13.4 5.7 0.42 10.9 5.6 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) BRE1 PF08647.11 gi|433638340|ref|YP_007284100.1| - 0.071 13.2 3.0 10 6.3 0.1 2.5 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF2730 PF10805.8 gi|433638340|ref|YP_007284100.1| - 0.072 13.2 6.7 2.6 8.2 0.7 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF2730) YscO PF07321.12 gi|433638340|ref|YP_007284100.1| - 0.08 12.9 2.7 1 9.3 0.2 2.7 1 1 1 2 2 2 0 Type III secretion protein YscO DUF4559 PF15112.6 gi|433638340|ref|YP_007284100.1| - 0.094 12.4 3.6 0.17 11.5 3.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Tropomyosin_1 PF12718.7 gi|433638340|ref|YP_007284100.1| - 0.097 12.8 18.1 0.13 12.4 1.0 3.2 1 1 2 3 3 3 0 Tropomyosin like DUF745 PF05335.13 gi|433638340|ref|YP_007284100.1| - 0.099 12.4 4.8 0.62 9.8 4.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF745) PI3K_P85_iSH2 PF16454.5 gi|433638340|ref|YP_007284100.1| - 0.1 12.2 2.0 1.5 8.4 1.0 2.8 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Noelin-1 PF12308.8 gi|433638340|ref|YP_007284100.1| - 0.1 12.6 2.6 8.5 6.4 0.3 2.8 1 1 2 3 3 3 0 Neurogenesis glycoprotein DUF713 PF05218.14 gi|433638340|ref|YP_007284100.1| - 0.1 12.3 0.4 2.1 8.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF713) Jnk-SapK_ap_N PF09744.9 gi|433638340|ref|YP_007284100.1| - 0.11 12.7 11.5 0.093 12.9 4.6 2.9 2 1 2 4 4 3 0 JNK_SAPK-associated protein-1 COG6 PF06419.11 gi|433638340|ref|YP_007284100.1| - 0.12 10.6 7.2 0.16 10.2 2.1 2.4 1 1 1 2 2 2 0 Conserved oligomeric complex COG6 DASH_Duo1 PF08651.10 gi|433638340|ref|YP_007284100.1| - 0.12 12.1 6.5 5.3 6.9 0.4 3.8 1 1 2 3 3 3 0 DASH complex subunit Duo1 Retrotrans_gag PF03732.17 gi|433638340|ref|YP_007284100.1| - 0.13 12.5 0.1 0.52 10.6 0.1 2.2 1 1 0 1 1 1 0 Retrotransposon gag protein CCDC144C PF14915.6 gi|433638340|ref|YP_007284100.1| - 0.14 11.2 5.4 0.25 10.4 4.7 1.6 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region DUF948 PF06103.11 gi|433638340|ref|YP_007284100.1| - 0.14 12.4 17.6 0.14 12.5 1.5 3.3 3 1 1 4 4 2 0 Bacterial protein of unknown function (DUF948) KASH_CCD PF14662.6 gi|433638340|ref|YP_007284100.1| - 0.16 11.8 9.3 0.16 11.8 2.3 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH FUSC PF04632.12 gi|433638340|ref|YP_007284100.1| - 0.16 10.4 0.6 0.3 9.6 0.6 1.4 1 1 0 1 1 1 0 Fusaric acid resistance protein family RasGAP_C PF03836.15 gi|433638340|ref|YP_007284100.1| - 0.17 12.0 1.5 4.1 7.6 0.0 2.4 1 1 0 2 2 2 0 RasGAP C-terminus DHR10 PF18595.1 gi|433638340|ref|YP_007284100.1| - 0.17 12.0 10.4 0.94 9.5 2.5 2.7 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain CLZ PF16526.5 gi|433638340|ref|YP_007284100.1| - 0.17 12.2 10.5 7.2 7.0 0.6 4.5 1 1 3 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels COG5 PF10392.9 gi|433638340|ref|YP_007284100.1| - 0.21 11.8 11.8 0.74 10.0 1.7 3.4 2 1 1 3 3 2 0 Golgi transport complex subunit 5 Leu_zip PF15294.6 gi|433638340|ref|YP_007284100.1| - 0.22 11.0 8.9 0.06 12.9 1.9 2.3 1 1 1 2 2 2 0 Leucine zipper DNA_repr_REX1B PF14966.6 gi|433638340|ref|YP_007284100.1| - 0.22 12.2 3.6 4.6 8.0 0.3 3.4 1 1 2 3 3 3 0 DNA repair REX1-B Cortex-I_coil PF09304.10 gi|433638340|ref|YP_007284100.1| - 0.25 11.6 11.8 0.32 11.2 6.1 2.9 1 1 2 3 3 3 0 Cortexillin I, coiled coil XhlA PF10779.9 gi|433638340|ref|YP_007284100.1| - 0.25 11.6 0.1 0.25 11.6 0.1 4.4 3 1 2 5 5 3 0 Haemolysin XhlA Cob_adeno_trans PF01923.18 gi|433638340|ref|YP_007284100.1| - 0.27 11.4 6.7 4.3 7.4 1.4 3.2 2 1 2 4 4 4 0 Cobalamin adenosyltransferase DUF641 PF04859.12 gi|433638340|ref|YP_007284100.1| - 0.34 11.3 4.8 4.5 7.6 0.1 3.0 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) YabA PF06156.13 gi|433638340|ref|YP_007284100.1| - 0.36 11.5 3.8 17 6.1 0.1 2.9 1 1 1 2 2 2 0 Initiation control protein YabA Occludin_ELL PF07303.13 gi|433638340|ref|YP_007284100.1| - 0.38 11.5 0.7 76 4.1 0.0 3.2 1 1 1 3 3 2 0 Occludin homology domain DUF4446 PF14584.6 gi|433638340|ref|YP_007284100.1| - 0.42 10.6 2.4 6.9 6.6 0.4 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) RPW8 PF05659.11 gi|433638340|ref|YP_007284100.1| - 0.47 10.1 2.2 21 4.8 0.3 2.8 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Seryl_tRNA_N PF02403.22 gi|433638340|ref|YP_007284100.1| - 0.5 10.6 5.3 9.6 6.5 1.6 3.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF2408 PF10303.9 gi|433638340|ref|YP_007284100.1| - 0.55 10.8 6.8 2 9.0 4.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) CC2-LZ PF16516.5 gi|433638340|ref|YP_007284100.1| - 0.67 10.3 7.5 1.5 9.2 0.6 2.9 2 1 1 3 3 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator ING PF12998.7 gi|433638340|ref|YP_007284100.1| - 0.71 10.5 6.5 2.7 8.7 0.7 3.3 2 1 1 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding DUF4455 PF14643.6 gi|433638340|ref|YP_007284100.1| - 0.71 8.5 6.6 1.6 7.3 6.4 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4455) Wtap PF17098.5 gi|433638340|ref|YP_007284100.1| - 0.81 9.6 12.7 4.7 7.1 1.6 2.6 1 1 0 2 2 2 0 WTAP/Mum2p family Bacillus_HBL PF05791.11 gi|433638340|ref|YP_007284100.1| - 0.81 9.5 5.8 1.1 9.1 1.6 2.6 1 1 2 3 3 2 0 Bacillus haemolytic enterotoxin (HBL) Dor1 PF04124.12 gi|433638340|ref|YP_007284100.1| - 0.82 8.3 8.4 11 4.5 0.9 2.2 1 1 1 2 2 2 0 Dor1-like family GCN5L1 PF06320.13 gi|433638340|ref|YP_007284100.1| - 0.86 9.8 5.3 1.2 9.4 0.7 2.7 2 1 1 3 3 2 0 GCN5-like protein 1 (GCN5L1) DUF4407 PF14362.6 gi|433638340|ref|YP_007284100.1| - 0.9 8.8 6.5 2.3 7.5 6.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Nsp1_C PF05064.13 gi|433638340|ref|YP_007284100.1| - 1.1 9.1 8.0 0.88 9.4 3.7 2.7 1 1 2 3 3 3 0 Nsp1-like C-terminal region Fez1 PF06818.15 gi|433638340|ref|YP_007284100.1| - 1.1 9.6 14.6 0.62 10.5 8.2 2.7 1 1 1 2 2 1 0 Fez1 LMBR1 PF04791.16 gi|433638340|ref|YP_007284100.1| - 1.2 8.0 3.7 1.6 7.5 2.9 1.3 1 1 0 1 1 1 0 LMBR1-like membrane protein THOC7 PF05615.13 gi|433638340|ref|YP_007284100.1| - 1.3 9.3 8.0 1 9.7 0.8 2.5 1 1 1 2 2 2 0 Tho complex subunit 7 Baculo_p24 PF05073.12 gi|433638340|ref|YP_007284100.1| - 1.3 8.7 3.6 2.6 7.8 2.9 1.9 1 1 0 1 1 1 0 Baculovirus P24 capsid protein IFT57 PF10498.9 gi|433638340|ref|YP_007284100.1| - 1.5 7.7 26.7 2.2e+02 0.6 26.7 2.8 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 MIP-T3_C PF17749.1 gi|433638340|ref|YP_007284100.1| - 1.6 8.7 6.5 2.4 8.1 3.7 2.6 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region Spc24 PF08286.11 gi|433638340|ref|YP_007284100.1| - 1.6 9.0 13.7 3.2 8.0 1.4 4.1 1 1 2 3 3 2 0 Spc24 subunit of Ndc80 CorA PF01544.18 gi|433638340|ref|YP_007284100.1| - 1.6 8.0 8.3 13 5.0 8.2 2.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Golgin_A5 PF09787.9 gi|433638340|ref|YP_007284100.1| - 1.7 8.1 15.1 0.54 9.7 11.8 1.8 1 1 0 1 1 1 0 Golgin subfamily A member 5 TBCC_N PF16752.5 gi|433638340|ref|YP_007284100.1| - 2.2 8.8 10.7 17 5.9 1.4 4.0 1 1 2 3 3 3 0 Tubulin-specific chaperone C N-terminal domain bZIP_1 PF00170.21 gi|433638340|ref|YP_007284100.1| - 2.3 8.4 5.6 13 6.0 0.6 3.0 3 1 0 3 3 2 0 bZIP transcription factor zf-C4H2 PF10146.9 gi|433638340|ref|YP_007284100.1| - 2.3 8.5 7.8 2.5 8.4 5.0 2.3 1 1 1 2 2 2 0 Zinc finger-containing protein DegS PF05384.11 gi|433638340|ref|YP_007284100.1| - 2.5 7.6 6.1 12 5.3 5.9 2.4 1 1 0 1 1 1 0 Sensor protein DegS Cnn_1N PF07989.11 gi|433638340|ref|YP_007284100.1| - 2.7 8.2 6.1 18 5.6 2.1 3.1 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Lzipper-MIP1 PF14389.6 gi|433638340|ref|YP_007284100.1| - 2.8 8.3 10.1 1.6 9.1 3.8 3.2 1 1 2 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 CK2S PF15011.6 gi|433638340|ref|YP_007284100.1| - 2.9 7.8 5.1 14 5.6 0.8 2.6 1 1 0 2 2 2 0 Casein Kinase 2 substrate MCU PF04678.13 gi|433638340|ref|YP_007284100.1| - 3.1 7.9 4.7 4.8 7.2 1.1 2.3 1 1 1 2 2 2 0 Mitochondrial calcium uniporter Cluap1 PF10234.9 gi|433638340|ref|YP_007284100.1| - 3.3 7.0 11.8 20 4.4 9.3 2.8 1 1 1 2 2 2 0 Clusterin-associated protein-1 ISG65-75 PF11727.8 gi|433638340|ref|YP_007284100.1| - 3.6 6.7 12.6 1.6 7.9 0.3 2.7 2 1 1 3 3 2 0 Invariant surface glycoprotein Rho_Binding PF08912.11 gi|433638340|ref|YP_007284100.1| - 4 8.3 5.2 28 5.6 2.1 3.2 1 1 1 2 2 2 0 Rho Binding Cep57_CLD_2 PF14197.6 gi|433638340|ref|YP_007284100.1| - 4 7.6 7.8 19 5.4 1.6 2.9 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 Vps5 PF09325.10 gi|433638340|ref|YP_007284100.1| - 4.3 6.8 17.0 0.29 10.6 1.2 3.0 2 1 1 3 3 3 0 Vps5 C terminal like DUF1515 PF07439.11 gi|433638340|ref|YP_007284100.1| - 4.9 7.2 6.6 2.9 7.9 1.0 3.1 1 1 1 3 3 2 0 Protein of unknown function (DUF1515) Fzo_mitofusin PF04799.13 gi|433638340|ref|YP_007284100.1| - 5.2 6.6 5.0 26 4.3 0.7 2.6 1 1 1 2 2 2 0 fzo-like conserved region JIP_LZII PF16471.5 gi|433638340|ref|YP_007284100.1| - 5.7 7.2 14.2 2.3 8.4 0.3 3.7 2 2 1 3 3 3 0 JNK-interacting protein leucine zipper II HemX PF04375.14 gi|433638340|ref|YP_007284100.1| - 5.7 6.1 15.6 0.56 9.4 0.1 3.2 2 1 1 3 3 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Lectin_N PF03954.14 gi|433638340|ref|YP_007284100.1| - 7.1 6.4 10.8 43 3.9 8.0 3.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain CENP-H PF05837.12 gi|433638340|ref|YP_007284100.1| - 8.2 6.9 9.0 11 6.5 0.5 3.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) HIP1_clath_bdg PF16515.5 gi|433638340|ref|YP_007284100.1| - 8.9 7.0 16.1 11 6.7 5.2 3.5 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Phage_integrase PF00589.22 gi|433638341|ref|YP_007284101.1| - 5e-17 62.2 0.0 8.6e-17 61.5 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|433638341|ref|YP_007284101.1| - 1.2e-08 35.1 0.2 2.7e-08 34.0 0.2 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|433638341|ref|YP_007284101.1| - 0.00035 21.0 0.3 0.0013 19.2 0.3 2.0 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_integr_3 PF16795.5 gi|433638341|ref|YP_007284101.1| - 0.053 13.4 0.0 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Archaeal phage integrase DUF4370 PF14290.6 gi|433638342|ref|YP_007284102.1| - 0.11 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4370) CelTOS PF18659.1 gi|433638342|ref|YP_007284102.1| - 0.19 12.1 0.1 0.33 11.4 0.1 1.3 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites ABC_tran PF00005.27 gi|433638343|ref|YP_007284103.1| - 3.8e-33 114.9 0.0 7.1e-33 114.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638343|ref|YP_007284103.1| - 1e-09 38.7 1.3 5.9e-05 23.0 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433638343|ref|YP_007284103.1| - 2.9e-07 30.2 0.2 1.9e-06 27.5 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|433638343|ref|YP_007284103.1| - 6e-05 23.6 0.0 8.9e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|433638343|ref|YP_007284103.1| - 0.00022 21.2 0.1 0.00041 20.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|433638343|ref|YP_007284103.1| - 0.001 18.8 0.3 0.001 18.8 0.3 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433638343|ref|YP_007284103.1| - 0.0011 19.3 2.2 0.0013 19.2 0.5 2.0 2 1 0 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|433638343|ref|YP_007284103.1| - 0.0055 16.8 0.1 0.02 15.0 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_19 PF13245.6 gi|433638343|ref|YP_007284103.1| - 0.014 15.8 0.0 0.074 13.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|433638343|ref|YP_007284103.1| - 0.025 14.2 0.0 0.063 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433638343|ref|YP_007284103.1| - 0.025 14.3 0.2 0.025 14.3 0.2 2.1 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 gi|433638343|ref|YP_007284103.1| - 0.028 14.8 0.1 0.17 12.3 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433638343|ref|YP_007284103.1| - 0.04 14.2 0.1 0.17 12.2 0.1 2.1 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|433638343|ref|YP_007284103.1| - 0.042 13.2 0.0 0.076 12.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|433638343|ref|YP_007284103.1| - 0.042 14.0 1.8 0.33 11.1 0.3 2.8 2 1 0 3 3 3 0 AAA domain ABC_ATPase PF09818.9 gi|433638343|ref|YP_007284103.1| - 0.048 12.4 0.3 7.3 5.3 0.1 2.3 2 0 0 2 2 2 0 Predicted ATPase of the ABC class MukB PF04310.12 gi|433638343|ref|YP_007284103.1| - 0.054 13.3 0.2 0.12 12.2 0.1 1.5 2 0 0 2 2 1 0 MukB N-terminal AAA_15 PF13175.6 gi|433638343|ref|YP_007284103.1| - 0.067 12.9 0.0 0.18 11.5 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain Zeta_toxin PF06414.12 gi|433638343|ref|YP_007284103.1| - 0.09 12.0 0.0 0.2 10.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin RNA12 PF10443.9 gi|433638343|ref|YP_007284103.1| - 0.1 11.3 0.0 0.15 10.8 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein NB-ARC PF00931.22 gi|433638343|ref|YP_007284103.1| - 0.15 11.3 0.0 0.27 10.4 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_13 PF13166.6 gi|433638343|ref|YP_007284103.1| - 0.2 10.3 0.2 14 4.2 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|433638343|ref|YP_007284103.1| - 0.21 11.1 0.0 0.35 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region FecCD PF01032.18 gi|433638344|ref|YP_007284104.1| - 3e-89 299.1 28.9 4.1e-89 298.7 28.3 1.6 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|433638344|ref|YP_007284104.1| - 0.028 13.9 16.0 0.03 13.8 15.1 1.5 1 1 0 1 1 1 0 ABC 3 transport family Peripla_BP_2 PF01497.18 gi|433638345|ref|YP_007284105.1| - 4.5e-19 69.0 4.2 6.5e-19 68.4 4.2 1.2 1 0 0 1 1 1 1 Periplasmic binding protein PGF-CTERM PF18204.1 gi|433638345|ref|YP_007284105.1| - 9.6e-07 28.6 5.7 9.6e-07 28.6 5.7 2.3 2 0 0 2 2 2 1 PGF-CTERM motif CENP-B_dimeris PF09026.10 gi|433638345|ref|YP_007284105.1| - 0.015 15.6 0.2 0.032 14.6 0.2 1.5 1 0 0 1 1 1 0 Centromere protein B dimerisation domain SRP19 PF01922.17 gi|433638346|ref|YP_007284106.1| - 2.4e-25 89.3 0.0 2.8e-25 89.1 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein Gar1 PF04410.14 gi|433638347|ref|YP_007284107.1| - 1.2e-10 41.3 0.0 1.2e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region SPP PF06550.11 gi|433638348|ref|YP_007284108.1| - 2.4e-79 266.7 22.4 1.3e-78 264.4 22.4 1.8 1 1 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|433638348|ref|YP_007284108.1| - 5.9e-07 29.3 4.4 0.00012 21.7 1.9 2.2 2 0 0 2 2 2 2 Signal peptide peptidase Presenilin PF01080.17 gi|433638348|ref|YP_007284108.1| - 2.7e-05 23.1 3.5 0.0015 17.4 5.0 2.2 2 0 0 2 2 2 1 Presenilin tRNA-synt_1e PF01406.19 gi|433638349|ref|YP_007284109.1| - 3.6e-107 358.2 0.0 1.1e-105 353.3 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 gi|433638349|ref|YP_007284109.1| - 1.5e-13 51.0 0.4 6.1e-13 49.0 0.1 2.2 3 0 0 3 3 3 1 DALR domain tRNA-synt_1g PF09334.11 gi|433638349|ref|YP_007284109.1| - 1.1e-09 37.6 0.0 0.00036 19.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|433638349|ref|YP_007284109.1| - 1.2e-07 31.0 0.1 0.0003 19.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|433638349|ref|YP_007284109.1| - 0.02 13.1 0.1 0.065 11.5 0.0 1.7 2 0 0 2 2 2 0 tRNA synthetases class I (I, L, M and V) UVR PF02151.19 gi|433638349|ref|YP_007284109.1| - 0.048 13.4 0.2 0.048 13.4 0.2 2.4 3 0 0 3 3 3 0 UvrB/uvrC motif tRNA-synt_1d PF00750.19 gi|433638349|ref|YP_007284109.1| - 0.053 12.5 0.0 0.26 10.2 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class I (R) FIVAR PF07554.13 gi|433638349|ref|YP_007284109.1| - 0.11 13.3 0.3 0.25 12.2 0.3 1.6 1 0 0 1 1 1 0 FIVAR domain SPOR PF05036.13 gi|433638349|ref|YP_007284109.1| - 0.17 12.3 0.1 5.2 7.5 0.0 2.4 2 0 0 2 2 2 0 Sporulation related domain BolA PF01722.18 gi|433638351|ref|YP_007284111.1| - 2.1e-18 66.3 0.1 3.1e-18 65.8 0.1 1.2 1 1 0 1 1 1 1 BolA-like protein bPH_2 PF03703.14 gi|433638352|ref|YP_007284112.1| - 1.2e-14 54.2 0.0 1.6e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial PH domain bPH_2 PF03703.14 gi|433638353|ref|YP_007284113.1| - 1.7e-53 178.8 1.9 4.1e-19 68.5 0.3 3.5 3 0 0 3 3 3 3 Bacterial PH domain bPH_4 PF06713.11 gi|433638353|ref|YP_007284113.1| - 6.9e-05 22.9 0.0 0.015 15.3 0.0 3.0 3 0 0 3 3 3 2 Bacterial PH domain Lyase_1 PF00206.20 gi|433638354|ref|YP_007284114.1| - 5.8e-108 361.0 0.1 7.8e-108 360.5 0.1 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|433638354|ref|YP_007284114.1| - 7.8e-22 77.5 1.6 1.2e-21 76.9 0.2 2.1 2 0 0 2 2 2 1 Fumarase C C-terminus Trm56 PF01994.16 gi|433638354|ref|YP_007284114.1| - 0.084 12.8 0.0 0.6 10.0 0.0 2.2 2 0 0 2 2 2 0 tRNA ribose 2'-O-methyltransferase, aTrm56 GatB_N PF02934.15 gi|433638355|ref|YP_007284115.1| - 2e-64 217.6 0.0 2.8e-64 217.2 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|433638355|ref|YP_007284115.1| - 2.1e-21 76.4 0.0 3.6e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|433638355|ref|YP_007284115.1| - 4.1e-13 49.4 0.0 8.5e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 GAD domain YqeY PF09424.10 gi|433638355|ref|YP_007284115.1| - 0.00029 20.9 0.4 0.00063 19.8 0.4 1.6 1 0 0 1 1 1 1 Yqey-like protein MukF_M PF17192.4 gi|433638355|ref|YP_007284115.1| - 0.14 11.9 0.0 0.31 10.8 0.0 1.6 1 0 0 1 1 1 0 MukF middle domain SpoU_methylase PF00588.19 gi|433638356|ref|YP_007284116.1| - 1.7e-27 96.3 0.0 2.2e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Pterin_bind PF00809.22 gi|433638357|ref|YP_007284117.1| - 1.8e-35 122.8 0.1 2.1e-35 122.6 0.1 1.1 1 0 0 1 1 1 1 Pterin binding enzyme MAF_flag10 PF01973.18 gi|433638358|ref|YP_007284118.1| - 2.9e-15 56.4 0.0 4e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 DUF460 PF04312.13 gi|433638358|ref|YP_007284118.1| - 0.075 12.7 0.4 0.12 12.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF460) B12-binding PF02310.19 gi|433638358|ref|YP_007284118.1| - 0.085 12.9 0.2 5.2 7.1 0.1 2.2 1 1 1 2 2 2 0 B12 binding domain NPV_P10 PF05531.12 gi|433638358|ref|YP_007284118.1| - 0.14 12.7 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF4203 PF13886.6 gi|433638359|ref|YP_007284119.1| - 0.018 14.7 15.1 0.022 14.5 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) RseC_MucC PF04246.12 gi|433638359|ref|YP_007284119.1| - 8.4 6.4 10.5 0.68 9.9 3.2 2.1 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Bac_luciferase PF00296.20 gi|433638360|ref|YP_007284120.1| - 4.8e-68 229.9 6.6 6.3e-68 229.5 6.6 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase HalOD1 PF18545.1 gi|433638361|ref|YP_007284121.1| - 1.5e-29 102.1 2.3 1.8e-29 101.8 2.3 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 DUF2960 PF11173.8 gi|433638361|ref|YP_007284121.1| - 0.18 12.2 0.0 0.34 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2960) Meth_synt_2 PF01717.18 gi|433638362|ref|YP_007284122.1| - 1e-59 202.5 0.0 1.4e-59 202.0 0.0 1.1 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|433638362|ref|YP_007284122.1| - 1e-13 51.5 0.0 1.6e-13 50.9 0.0 1.3 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.17 gi|433638362|ref|YP_007284122.1| - 0.00053 19.2 0.0 0.00073 18.8 0.0 1.2 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Meth_synt_1 PF08267.12 gi|433638363|ref|YP_007284123.1| - 1.6e-13 50.8 0.0 1.2e-12 48.0 0.0 1.9 1 1 1 2 2 2 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|433638363|ref|YP_007284123.1| - 3e-11 43.2 0.0 8.5e-11 41.7 0.0 1.6 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain GA-like PF17573.2 gi|433638363|ref|YP_007284123.1| - 0.13 12.2 0.0 0.45 10.5 0.0 1.9 1 0 0 1 1 1 0 GA-like domain Methyltransf_11 PF08241.12 gi|433638364|ref|YP_007284124.1| - 2.2e-07 31.4 0.3 4e-06 27.4 0.3 2.2 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433638364|ref|YP_007284124.1| - 4.1e-07 29.7 0.0 1.8e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|433638364|ref|YP_007284124.1| - 7.3e-07 29.8 0.0 3.3e-05 24.5 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638364|ref|YP_007284124.1| - 4.6e-06 26.6 0.0 4.8e-05 23.2 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638364|ref|YP_007284124.1| - 0.00055 20.6 0.0 0.08 13.7 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain MetW PF07021.12 gi|433638364|ref|YP_007284124.1| - 0.0021 17.7 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 gi|433638364|ref|YP_007284124.1| - 0.014 15.2 0.0 0.027 14.3 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain UPF0146 PF03686.13 gi|433638364|ref|YP_007284124.1| - 0.014 15.2 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) TrkA_N PF02254.18 gi|433638364|ref|YP_007284124.1| - 0.021 15.1 0.0 0.13 12.5 0.0 2.1 2 0 0 2 2 2 0 TrkA-N domain PCMT PF01135.19 gi|433638364|ref|YP_007284124.1| - 0.033 13.9 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|433638364|ref|YP_007284124.1| - 0.26 10.6 0.0 12 5.1 0.0 2.1 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase MS_channel PF00924.18 gi|433638365|ref|YP_007284125.1| - 8e-42 143.1 0.0 1.3e-41 142.4 0.0 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF4834 PF16118.5 gi|433638365|ref|YP_007284125.1| - 0.24 12.4 0.4 0.59 11.1 0.4 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4083 PF13314.6 gi|433638365|ref|YP_007284125.1| - 4.8 7.2 5.1 1.2 9.1 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) RrnaAD PF00398.20 gi|433638366|ref|YP_007284126.1| - 1e-46 159.2 0.0 1.2e-46 159.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|433638366|ref|YP_007284126.1| - 0.00016 22.3 0.0 0.00029 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433638366|ref|YP_007284126.1| - 0.00075 20.2 0.0 0.0015 19.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638366|ref|YP_007284126.1| - 0.099 12.5 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_28 PF02636.17 gi|433638366|ref|YP_007284126.1| - 0.11 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_12 PF08242.12 gi|433638366|ref|YP_007284126.1| - 0.12 13.1 0.0 0.3 11.9 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain DUF655 PF04919.12 gi|433638367|ref|YP_007284127.1| - 1.8e-61 207.3 0.0 2.1e-61 207.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_3 PF12836.7 gi|433638367|ref|YP_007284127.1| - 0.00017 21.7 0.0 0.00031 20.9 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_6 PF14579.6 gi|433638367|ref|YP_007284127.1| - 0.00064 19.9 0.0 0.00099 19.3 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|433638367|ref|YP_007284127.1| - 0.015 15.1 0.0 0.05 13.5 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|433638367|ref|YP_007284127.1| - 0.07 13.7 1.5 0.45 11.2 0.6 2.5 2 1 0 2 2 2 0 Helix-hairpin-helix domain RNA_pol_Rpb4 PF03874.16 gi|433638368|ref|YP_007284128.1| - 5e-13 49.5 3.1 6.2e-13 49.1 3.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 Ribosomal_L21e PF01157.18 gi|433638369|ref|YP_007284129.1| - 2.5e-31 107.5 0.1 2.7e-31 107.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e Cys_Met_Meta_PP PF01053.20 gi|433638370|ref|YP_007284130.1| - 1.6e-146 487.8 0.0 1.8e-146 487.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|433638370|ref|YP_007284130.1| - 0.00027 20.0 0.0 0.00041 19.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Met_gamma_lyase PF06838.11 gi|433638370|ref|YP_007284130.1| - 0.0016 17.0 0.0 0.0024 16.4 0.0 1.2 1 0 0 1 1 1 1 Methionine gamma-lyase HTH_10 PF04967.12 gi|433638371|ref|YP_007284131.1| - 4.2e-13 48.9 0.0 9.6e-13 47.7 0.0 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Methyltransf_11 PF08241.12 gi|433638372|ref|YP_007284132.1| - 3e-19 69.4 0.0 8.1e-19 68.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433638372|ref|YP_007284132.1| - 3.9e-19 69.1 0.0 8.7e-19 68.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638372|ref|YP_007284132.1| - 8.2e-19 67.9 0.0 1.2e-18 67.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433638372|ref|YP_007284132.1| - 9.3e-19 67.7 0.0 1.3e-18 67.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|433638372|ref|YP_007284132.1| - 8.5e-18 64.7 0.0 1.2e-17 64.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638372|ref|YP_007284132.1| - 1.3e-14 54.7 0.0 2.1e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|433638372|ref|YP_007284132.1| - 5e-14 52.6 0.0 8.9e-14 51.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|433638372|ref|YP_007284132.1| - 8.5e-05 22.7 0.0 0.00022 21.4 0.0 1.8 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 gi|433638372|ref|YP_007284132.1| - 0.00012 21.7 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F CMAS PF02353.20 gi|433638372|ref|YP_007284132.1| - 0.00034 20.0 0.0 0.00049 19.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 gi|433638372|ref|YP_007284132.1| - 0.0023 17.5 0.0 0.0037 16.9 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Fibrillarin PF01269.17 gi|433638372|ref|YP_007284132.1| - 0.017 14.3 0.0 0.021 13.9 0.0 1.1 1 0 0 1 1 1 0 Fibrillarin MTS PF05175.14 gi|433638372|ref|YP_007284132.1| - 0.019 14.5 0.0 0.039 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_24 PF13578.6 gi|433638372|ref|YP_007284132.1| - 0.092 13.8 0.1 0.3 12.1 0.0 1.8 2 0 0 2 2 1 0 Methyltransferase domain ADH_zinc_N_2 PF13602.6 gi|433638372|ref|YP_007284132.1| - 0.13 13.3 0.1 0.82 10.7 0.0 2.2 1 1 2 3 3 3 0 Zinc-binding dehydrogenase NNMT_PNMT_TEMT PF01234.17 gi|433638372|ref|YP_007284132.1| - 0.15 11.3 0.0 0.73 9.0 0.0 1.9 2 0 0 2 2 2 0 NNMT/PNMT/TEMT family Lactamase_B PF00753.27 gi|433638373|ref|YP_007284133.1| - 2.9e-31 109.0 12.2 3.6e-31 108.7 12.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433638373|ref|YP_007284133.1| - 5.8e-07 29.2 2.2 9e-07 28.6 1.9 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 gi|433638373|ref|YP_007284133.1| - 0.00039 20.0 0.0 0.00047 19.7 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|433638373|ref|YP_007284133.1| - 0.016 14.6 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain EF1_GNE PF00736.19 gi|433638375|ref|YP_007284135.1| - 1.2e-18 67.0 0.0 1.3e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain OrfB_Zn_ribbon PF07282.11 gi|433638376|ref|YP_007284136.1| - 0.00049 20.0 7.6 0.016 15.1 4.5 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain DUF1610 PF07754.11 gi|433638376|ref|YP_007284136.1| - 0.00056 19.8 4.9 0.00056 19.8 4.9 2.4 3 0 0 3 3 2 1 Domain of unknown function (DUF1610) C1_2 PF03107.16 gi|433638376|ref|YP_007284136.1| - 0.0011 19.3 9.8 0.081 13.3 2.7 2.0 1 1 1 2 2 2 2 C1 domain zf-Mss51 PF13824.6 gi|433638376|ref|YP_007284136.1| - 0.0016 18.5 11.7 0.33 11.1 2.0 2.9 1 1 2 3 3 3 1 Zinc-finger of mitochondrial splicing suppressor 51 Zn-ribbon_8 PF09723.10 gi|433638376|ref|YP_007284136.1| - 0.013 15.6 11.8 0.11 12.6 8.5 2.4 2 1 0 2 2 2 0 Zinc ribbon domain zf-CHY PF05495.12 gi|433638376|ref|YP_007284136.1| - 0.023 15.2 9.9 0.8 10.2 10.4 2.0 1 1 1 2 2 2 0 CHY zinc finger zf-tcix PF14952.6 gi|433638376|ref|YP_007284136.1| - 0.028 14.0 18.8 0.31 10.7 0.2 3.2 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding NMDAR2_C PF10565.9 gi|433638376|ref|YP_007284136.1| - 0.046 12.6 6.4 0.049 12.5 6.4 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus HypA PF01155.19 gi|433638376|ref|YP_007284136.1| - 0.054 13.5 11.2 0.068 13.2 1.0 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-HIT PF04438.16 gi|433638376|ref|YP_007284136.1| - 0.065 13.1 14.0 1 9.3 3.8 2.7 2 1 0 2 2 2 0 HIT zinc finger Rhodanese_C PF12368.8 gi|433638376|ref|YP_007284136.1| - 0.067 13.6 8.6 0.072 13.5 8.6 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal HscB_4_cys PF18256.1 gi|433638376|ref|YP_007284136.1| - 0.1 12.5 2.3 0.1 12.5 2.3 2.9 3 0 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif zinc-ribbons_6 PF07191.12 gi|433638376|ref|YP_007284136.1| - 0.13 12.2 10.1 1.6 8.7 10.0 1.9 1 1 0 1 1 1 0 zinc-ribbons DNA_RNApol_7kD PF03604.13 gi|433638376|ref|YP_007284136.1| - 0.14 11.8 11.7 0.12 12.1 1.5 2.9 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 gi|433638376|ref|YP_007284136.1| - 0.17 11.3 13.9 2.2 7.8 0.2 3.6 4 0 0 4 4 4 0 zinc-ribbon domain C1_1 PF00130.22 gi|433638376|ref|YP_007284136.1| - 0.17 11.8 8.5 0.27 11.2 0.5 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ACC PF17848.1 gi|433638376|ref|YP_007284136.1| - 0.21 11.7 0.6 0.21 11.7 0.6 3.4 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain FYVE_2 PF02318.16 gi|433638376|ref|YP_007284136.1| - 0.22 11.7 5.6 0.25 11.6 5.6 1.0 1 0 0 1 1 1 0 FYVE-type zinc finger PolC_DP2 PF03833.13 gi|433638376|ref|YP_007284136.1| - 0.24 9.2 7.4 0.26 9.1 7.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf_UBZ PF18439.1 gi|433638376|ref|YP_007284136.1| - 0.25 11.0 11.7 0.79 9.4 0.3 3.7 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 gi|433638376|ref|YP_007284136.1| - 0.46 10.2 12.8 2 8.2 0.1 3.9 4 0 0 4 4 4 0 Rubredoxin metal binding domain Zn_Tnp_IS91 PF14319.6 gi|433638376|ref|YP_007284136.1| - 0.47 10.5 10.4 1.1 9.3 10.4 1.7 1 1 0 1 1 1 0 Transposase zinc-binding domain NMD3 PF04981.13 gi|433638376|ref|YP_007284136.1| - 0.53 9.7 9.9 0.61 9.5 9.9 1.0 1 0 0 1 1 1 0 NMD3 family Zn_Tnp_IS1595 PF12760.7 gi|433638376|ref|YP_007284136.1| - 0.57 10.2 16.0 2.2 8.3 10.6 2.9 1 1 2 3 3 3 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|433638376|ref|YP_007284136.1| - 0.73 9.6 14.6 1.3 8.9 3.5 3.5 1 1 3 4 4 4 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|433638376|ref|YP_007284136.1| - 0.76 9.7 0.1 0.76 9.7 0.1 3.6 3 1 0 4 4 4 0 zinc-ribbon domain YhfH PF14149.6 gi|433638376|ref|YP_007284136.1| - 1 9.4 12.3 47 4.1 8.4 3.2 2 1 1 3 3 3 0 YhfH-like protein A2L_zn_ribbon PF08792.10 gi|433638376|ref|YP_007284136.1| - 1 9.2 12.0 5 7.0 3.0 3.3 1 1 2 3 3 3 0 A2L zinc ribbon domain zf-MYND PF01753.18 gi|433638376|ref|YP_007284136.1| - 1.2 9.3 11.0 5.2 7.3 3.0 2.2 2 0 0 2 2 2 0 MYND finger zinc_ribbon_10 PF10058.9 gi|433638376|ref|YP_007284136.1| - 1.9 8.3 11.5 3.8 7.3 1.5 3.3 1 1 2 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein NRDD PF13597.6 gi|433638376|ref|YP_007284136.1| - 2.6 6.7 10.5 1.3 7.7 3.0 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase DUF2387 PF09526.10 gi|433638376|ref|YP_007284136.1| - 2.7 8.2 8.4 17 5.7 0.1 2.2 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) Spt4 PF06093.13 gi|433638376|ref|YP_007284136.1| - 3.4 7.8 9.8 15 5.7 9.8 1.9 1 1 0 1 1 1 0 Spt4/RpoE2 zinc finger zf-C2H2 PF00096.26 gi|433638376|ref|YP_007284136.1| - 3.8 8.1 16.5 3.5 8.3 0.7 3.3 3 1 0 3 3 3 0 Zinc finger, C2H2 type Zn_ribbon_SprT PF17283.2 gi|433638376|ref|YP_007284136.1| - 5.2 7.1 15.1 8 6.5 0.2 3.7 3 1 0 3 3 3 0 SprT-like zinc ribbon domain zf-AN1 PF01428.16 gi|433638376|ref|YP_007284136.1| - 5.3 7.3 12.0 12 6.2 1.4 2.4 2 1 0 2 2 2 0 AN1-like Zinc finger UPF0547 PF10571.9 gi|433638376|ref|YP_007284136.1| - 5.5 7.2 16.3 1.6 8.9 0.2 3.4 3 1 1 4 4 3 0 Uncharacterised protein family UPF0547 zf-C2H2_4 PF13894.6 gi|433638376|ref|YP_007284136.1| - 7.4 7.7 11.2 32 5.7 2.8 3.2 3 1 0 3 3 3 0 C2H2-type zinc finger DUF1451 PF07295.11 gi|433638376|ref|YP_007284136.1| - 8.3 6.4 9.6 1.4e+02 2.5 9.6 2.2 1 1 0 1 1 1 0 Zinc-ribbon containing domain TF_Zn_Ribbon PF08271.12 gi|433638376|ref|YP_007284136.1| - 8.6 6.0 16.2 31 4.2 0.8 3.2 2 1 1 3 3 3 0 TFIIB zinc-binding Dimer_Tnp_Tn5 PF02281.16 gi|433638377|ref|YP_007284137.1| - 0.034 13.8 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain TctA PF01970.16 gi|433638378|ref|YP_007284138.1| - 4.9e-67 226.4 46.7 6e-67 226.1 46.7 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family Ribosomal_60s PF00428.19 gi|433638379|ref|YP_007284139.1| - 4e-15 56.2 14.2 4.7e-15 55.9 14.2 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein RRN3 PF05327.11 gi|433638379|ref|YP_007284139.1| - 0.011 14.3 4.9 0.013 14.1 4.9 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 NOA36 PF06524.12 gi|433638379|ref|YP_007284139.1| - 2 7.6 10.1 2.2 7.6 10.1 1.1 1 0 0 1 1 1 0 NOA36 protein DUF2457 PF10446.9 gi|433638379|ref|YP_007284139.1| - 9.1 5.3 11.2 8.7 5.4 11.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Ribosomal_L10 PF00466.20 gi|433638380|ref|YP_007284140.1| - 1.1e-21 76.9 0.0 2e-21 76.0 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|433638380|ref|YP_007284140.1| - 3.3e-15 55.8 0.0 6.4e-15 54.9 0.0 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P SDA1 PF05285.12 gi|433638380|ref|YP_007284140.1| - 0.44 9.9 6.1 0.67 9.3 6.1 1.2 1 0 0 1 1 1 0 SDA1 Cwf_Cwc_15 PF04889.12 gi|433638380|ref|YP_007284140.1| - 0.77 9.4 7.7 1.3 8.7 7.7 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Astro_capsid_p PF12226.8 gi|433638380|ref|YP_007284140.1| - 3.4 6.7 8.4 4.7 6.3 8.4 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF2457 PF10446.9 gi|433638380|ref|YP_007284140.1| - 3.9 6.5 15.3 6 5.9 15.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CobT PF06213.12 gi|433638380|ref|YP_007284140.1| - 8.3 5.7 17.1 30 3.9 14.4 2.0 1 1 1 2 2 2 0 Cobalamin biosynthesis protein CobT Ribosomal_L1 PF00687.21 gi|433638381|ref|YP_007284141.1| - 4.4e-43 147.4 0.0 5.4e-43 147.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family MCLC PF05934.11 gi|433638382|ref|YP_007284142.1| - 0.31 9.7 0.2 0.44 9.2 0.2 1.3 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Ribosomal_L11 PF00298.19 gi|433638383|ref|YP_007284143.1| - 4.8e-20 71.8 0.0 7.7e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 gi|433638383|ref|YP_007284143.1| - 6.2e-18 64.4 0.1 1.1e-17 63.6 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain PEPCK_ATP PF01293.20 gi|433638385|ref|YP_007284145.1| - 7.4e-63 212.8 0.0 1.8e-62 211.5 0.0 1.6 1 1 0 1 1 1 1 Phosphoenolpyruvate carboxykinase PEPCK_GTP PF00821.18 gi|433638385|ref|YP_007284145.1| - 0.17 10.7 0.0 0.54 9.0 0.0 1.6 1 1 1 2 2 2 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DUF1664 PF07889.12 gi|433638386|ref|YP_007284146.1| - 3.3e-17 62.7 34.0 0.0006 19.8 2.0 7.8 2 1 6 8 8 8 4 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 gi|433638386|ref|YP_007284146.1| - 9e-15 54.9 35.7 0.0009 19.3 0.7 6.8 1 1 5 6 6 6 4 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 gi|433638386|ref|YP_007284146.1| - 2.3e-11 44.0 59.7 1.7e-08 34.6 21.8 4.3 1 1 3 4 4 4 3 Apolipoprotein A1/A4/E domain Spc7 PF08317.11 gi|433638386|ref|YP_007284146.1| - 3.3e-09 36.1 35.3 7.6e-06 25.0 0.4 4.6 1 1 3 4 4 4 3 Spc7 kinetochore protein NPV_P10 PF05531.12 gi|433638386|ref|YP_007284146.1| - 5e-09 36.5 52.9 0.29 11.6 0.6 9.6 1 1 5 7 7 6 3 Nucleopolyhedrovirus P10 protein AAA_13 PF13166.6 gi|433638386|ref|YP_007284146.1| - 1.1e-08 34.2 22.9 3.1e-06 26.2 9.8 3.7 1 1 3 4 4 4 3 AAA domain Fib_alpha PF08702.10 gi|433638386|ref|YP_007284146.1| - 8.4e-08 32.5 16.3 0.046 13.9 0.1 5.6 1 1 7 8 8 8 4 Fibrinogen alpha/beta chain family DUF3584 PF12128.8 gi|433638386|ref|YP_007284146.1| - 1.3e-07 29.6 41.0 3e-05 21.8 23.3 2.9 1 1 2 3 3 3 3 Protein of unknown function (DUF3584) BLOC1_2 PF10046.9 gi|433638386|ref|YP_007284146.1| - 1.9e-07 31.3 2.8 0.00026 21.2 0.1 7.9 1 1 5 8 8 8 3 Biogenesis of lysosome-related organelles complex-1 subunit 2 EzrA PF06160.12 gi|433638386|ref|YP_007284146.1| - 2.2e-07 29.5 19.2 5.9e-05 21.4 1.0 3.5 1 1 2 3 3 3 3 Septation ring formation regulator, EzrA FlaC_arch PF05377.11 gi|433638386|ref|YP_007284146.1| - 4e-07 30.3 41.0 0.16 12.4 0.6 11.0 5 3 8 13 13 13 1 Flagella accessory protein C (FlaC) SlyX PF04102.12 gi|433638386|ref|YP_007284146.1| - 4.4e-07 30.4 38.3 0.33 11.6 0.3 10.6 4 3 6 10 10 9 1 SlyX DUF16 PF01519.16 gi|433638386|ref|YP_007284146.1| - 9.3e-07 29.3 27.0 0.021 15.3 3.2 7.1 1 1 5 6 6 5 2 Protein of unknown function DUF16 Nup54 PF13874.6 gi|433638386|ref|YP_007284146.1| - 7.4e-06 26.1 11.7 1.3 9.1 1.6 5.6 2 2 1 4 4 4 2 Nucleoporin complex subunit 54 Atg14 PF10186.9 gi|433638386|ref|YP_007284146.1| - 1.5e-05 24.3 7.9 0.22 10.6 0.6 4.6 1 1 2 4 4 4 2 Vacuolar sorting 38 and autophagy-related subunit 14 KASH_CCD PF14662.6 gi|433638386|ref|YP_007284146.1| - 1.9e-05 24.6 22.7 0.00028 20.8 0.6 3.8 1 1 1 3 3 3 2 Coiled-coil region of CCDC155 or KASH DUF5082 PF16888.5 gi|433638386|ref|YP_007284146.1| - 2.3e-05 24.7 23.8 0.0016 18.8 0.3 6.6 2 2 3 6 6 6 2 Domain of unknown function (DUF5082) SHE3 PF17078.5 gi|433638386|ref|YP_007284146.1| - 2.6e-05 24.0 17.5 0.0039 16.9 1.7 3.8 1 1 2 4 4 3 2 SWI5-dependent HO expression protein 3 Exonuc_VII_L PF02601.15 gi|433638386|ref|YP_007284146.1| - 2.9e-05 23.8 13.4 0.11 12.0 0.1 4.0 1 1 3 4 4 4 2 Exonuclease VII, large subunit Filament PF00038.21 gi|433638386|ref|YP_007284146.1| - 3.5e-05 23.5 33.2 0.048 13.2 0.0 4.4 1 1 3 5 5 5 2 Intermediate filament protein CENP-F_leu_zip PF10473.9 gi|433638386|ref|YP_007284146.1| - 6.3e-05 23.0 41.8 0.00065 19.7 2.5 6.6 1 1 4 6 6 6 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 KxDL PF10241.9 gi|433638386|ref|YP_007284146.1| - 7.4e-05 23.0 2.9 0.42 10.9 0.0 5.1 4 1 1 5 5 5 1 Uncharacterized conserved protein DUF4618 PF15397.6 gi|433638386|ref|YP_007284146.1| - 0.00014 21.4 18.3 0.11 11.8 6.1 4.9 2 1 2 5 5 5 1 Domain of unknown function (DUF4618) ZapB PF06005.12 gi|433638386|ref|YP_007284146.1| - 0.00023 21.6 17.1 16 6.0 0.8 7.9 2 1 3 5 5 5 0 Cell division protein ZapB Prominin PF05478.11 gi|433638386|ref|YP_007284146.1| - 0.00024 19.3 14.4 0.02 12.9 2.7 2.6 1 1 0 2 2 2 2 Prominin Not3 PF04065.15 gi|433638386|ref|YP_007284146.1| - 0.00027 20.4 19.5 0.091 12.2 0.2 4.9 1 1 6 7 7 7 3 Not1 N-terminal domain, CCR4-Not complex component Collagen_mid PF15984.5 gi|433638386|ref|YP_007284146.1| - 0.00032 20.5 2.5 0.00032 20.5 2.5 4.0 3 2 1 4 4 3 1 Bacterial collagen, middle region Fez1 PF06818.15 gi|433638386|ref|YP_007284146.1| - 0.00042 20.8 27.6 0.33 11.4 1.9 4.4 1 1 3 4 4 4 2 Fez1 Spectrin PF00435.21 gi|433638386|ref|YP_007284146.1| - 0.00054 20.4 24.8 1.1 9.8 0.4 6.9 1 1 7 8 8 8 1 Spectrin repeat Bacillus_HBL PF05791.11 gi|433638386|ref|YP_007284146.1| - 0.00071 19.4 12.9 1 9.2 0.2 4.5 2 1 2 4 4 3 1 Bacillus haemolytic enterotoxin (HBL) TMF_DNA_bd PF12329.8 gi|433638386|ref|YP_007284146.1| - 0.00072 19.5 21.6 1.5 8.9 0.1 8.0 5 2 2 8 8 8 1 TATA element modulatory factor 1 DNA binding Laminin_II PF06009.12 gi|433638386|ref|YP_007284146.1| - 0.0011 18.9 30.3 0.024 14.6 0.5 6.1 1 1 4 5 5 5 2 Laminin Domain II Tropomyosin PF00261.20 gi|433638386|ref|YP_007284146.1| - 0.0012 18.3 46.5 0.01 15.2 10.9 3.9 2 1 0 3 3 3 1 Tropomyosin DUF4407 PF14362.6 gi|433638386|ref|YP_007284146.1| - 0.0013 18.2 2.8 0.0013 18.2 2.8 5.3 1 1 3 4 4 4 2 Domain of unknown function (DUF4407) Gp58 PF07902.11 gi|433638386|ref|YP_007284146.1| - 0.0013 17.1 29.6 0.0026 16.1 10.1 4.1 1 1 3 4 4 4 3 gp58-like protein Lambda_tail_I PF06805.12 gi|433638386|ref|YP_007284146.1| - 0.0018 18.6 0.5 4.4 7.7 0.1 3.6 1 1 1 2 2 2 0 Bacteriophage lambda tail assembly protein I Snapin_Pallidin PF14712.6 gi|433638386|ref|YP_007284146.1| - 0.0019 18.6 18.5 3.8 8.0 0.0 7.2 1 1 6 8 8 8 0 Snapin/Pallidin bZIP_1 PF00170.21 gi|433638386|ref|YP_007284146.1| - 0.0021 18.1 9.7 25 5.1 0.2 7.5 7 2 1 9 9 7 0 bZIP transcription factor YlqD PF11068.8 gi|433638386|ref|YP_007284146.1| - 0.0021 18.4 5.9 0.47 10.8 0.6 4.3 1 1 2 4 4 4 1 YlqD protein Phasin PF05597.11 gi|433638386|ref|YP_007284146.1| - 0.0021 18.1 38.5 0.025 14.6 3.9 6.6 2 2 4 6 6 6 2 Poly(hydroxyalcanoate) granule associated protein (phasin) Tropomyosin_1 PF12718.7 gi|433638386|ref|YP_007284146.1| - 0.0025 18.0 6.7 0.0025 18.0 6.7 6.5 1 1 5 6 6 4 2 Tropomyosin like IFT57 PF10498.9 gi|433638386|ref|YP_007284146.1| - 0.0029 16.7 9.2 0.0029 16.7 9.2 3.1 1 1 1 2 2 2 1 Intra-flagellar transport protein 57 MscS_porin PF12795.7 gi|433638386|ref|YP_007284146.1| - 0.003 17.2 33.7 0.28 10.7 0.6 4.5 1 1 1 3 3 3 1 Mechanosensitive ion channel porin domain DUF2730 PF10805.8 gi|433638386|ref|YP_007284146.1| - 0.0038 17.3 26.3 3.5 7.8 0.5 8.3 1 1 7 9 9 8 0 Protein of unknown function (DUF2730) STAT_alpha PF01017.20 gi|433638386|ref|YP_007284146.1| - 0.0049 16.8 6.9 0.05 13.5 1.5 4.0 3 1 0 3 3 2 1 STAT protein, all-alpha domain ADIP PF11559.8 gi|433638386|ref|YP_007284146.1| - 0.0053 16.9 21.4 3 7.9 0.2 6.4 3 1 3 7 7 7 0 Afadin- and alpha -actinin-Binding HrpB7 PF09486.10 gi|433638386|ref|YP_007284146.1| - 0.0057 17.1 53.9 0.19 12.1 2.9 6.3 1 1 3 6 6 5 1 Bacterial type III secretion protein (HrpB7) DUF148 PF02520.17 gi|433638386|ref|YP_007284146.1| - 0.0059 16.7 12.0 0.73 10.0 0.1 5.6 2 1 3 5 5 5 1 Domain of unknown function DUF148 DUF4988 PF16378.5 gi|433638386|ref|YP_007284146.1| - 0.007 16.1 20.7 5.9 6.5 0.0 8.9 4 3 3 9 9 9 0 Domain of unknown function APG6_N PF17675.1 gi|433638386|ref|YP_007284146.1| - 0.0079 16.7 45.0 0.099 13.2 0.4 5.8 1 1 5 6 6 6 2 Apg6 coiled-coil region DUF724 PF05266.14 gi|433638386|ref|YP_007284146.1| - 0.0083 16.0 17.1 0.14 11.9 0.5 4.7 2 1 5 7 7 6 1 Protein of unknown function (DUF724) Allexi_40kDa PF05549.11 gi|433638386|ref|YP_007284146.1| - 0.0091 15.5 23.2 0.65 9.5 0.2 5.3 1 1 3 5 5 5 2 Allexivirus 40kDa protein CorA PF01544.18 gi|433638386|ref|YP_007284146.1| - 0.0098 15.2 41.6 0.0099 15.2 2.4 6.5 3 1 3 6 6 6 1 CorA-like Mg2+ transporter protein FapA PF03961.13 gi|433638386|ref|YP_007284146.1| - 0.011 14.3 12.3 1.6 7.2 0.1 4.9 2 1 3 5 5 5 0 Flagellar Assembly Protein A DUF745 PF05335.13 gi|433638386|ref|YP_007284146.1| - 0.014 15.1 17.3 0.096 12.4 1.2 4.0 1 1 1 3 3 3 0 Protein of unknown function (DUF745) UPF0242 PF06785.11 gi|433638386|ref|YP_007284146.1| - 0.014 15.5 25.3 2.6 8.1 8.6 4.5 1 1 2 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus Syntaxin_2 PF14523.6 gi|433638386|ref|YP_007284146.1| - 0.014 15.7 14.7 3 8.3 0.0 6.0 2 1 2 5 5 5 0 Syntaxin-like protein Prefoldin PF02996.17 gi|433638386|ref|YP_007284146.1| - 0.015 15.2 24.4 3.7 7.5 0.7 8.1 4 3 5 9 9 8 0 Prefoldin subunit OmpH PF03938.14 gi|433638386|ref|YP_007284146.1| - 0.015 15.6 12.3 0.038 14.3 3.2 4.8 1 1 2 4 4 4 0 Outer membrane protein (OmpH-like) RasGAP_C PF03836.15 gi|433638386|ref|YP_007284146.1| - 0.016 15.4 6.3 13 5.9 0.7 4.9 2 1 2 5 5 5 0 RasGAP C-terminus TACC_C PF05010.14 gi|433638386|ref|YP_007284146.1| - 0.017 14.9 9.1 5.9 6.6 3.3 3.5 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HsbA PF12296.8 gi|433638386|ref|YP_007284146.1| - 0.018 15.5 2.2 0.018 15.5 2.2 5.6 3 2 4 7 7 5 0 Hydrophobic surface binding protein A DUF812 PF05667.11 gi|433638386|ref|YP_007284146.1| - 0.025 13.5 32.0 0.0074 15.2 2.2 4.0 1 1 2 3 3 3 0 Protein of unknown function (DUF812) Prefoldin_2 PF01920.20 gi|433638386|ref|YP_007284146.1| - 0.026 14.5 25.9 12 5.9 0.6 8.8 3 1 5 8 8 8 0 Prefoldin subunit DUF3450 PF11932.8 gi|433638386|ref|YP_007284146.1| - 0.027 13.8 34.0 0.039 13.3 0.2 5.7 1 1 5 6 6 4 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 gi|433638386|ref|YP_007284146.1| - 0.03 13.6 7.8 4.7 6.4 0.2 4.0 1 1 6 7 7 7 0 TMPIT-like protein ApoLp-III PF07464.11 gi|433638386|ref|YP_007284146.1| - 0.047 13.8 25.3 0.29 11.2 4.0 5.8 1 1 5 6 6 6 0 Apolipophorin-III precursor (apoLp-III) DUF4795 PF16043.5 gi|433638386|ref|YP_007284146.1| - 0.074 12.6 36.9 0.38 10.3 6.2 4.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4795) PLAC9 PF15205.6 gi|433638386|ref|YP_007284146.1| - 0.082 13.3 20.3 0.1 13.0 0.7 6.7 4 2 3 7 7 6 0 Placenta-specific protein 9 DUF948 PF06103.11 gi|433638386|ref|YP_007284146.1| - 0.094 13.0 39.8 0.24 11.7 0.9 7.7 2 1 3 6 6 6 0 Bacterial protein of unknown function (DUF948) SesA PF17107.5 gi|433638386|ref|YP_007284146.1| - 0.11 12.7 19.3 0.94 9.7 0.3 5.3 2 2 3 5 5 5 0 N-terminal domain on NACHT_NTPase and P-loop NTPases SKA2 PF16740.5 gi|433638386|ref|YP_007284146.1| - 0.11 12.3 10.4 2.3 8.0 0.9 5.5 2 2 4 6 6 6 0 Spindle and kinetochore-associated protein 2 Arfaptin PF06456.13 gi|433638386|ref|YP_007284146.1| - 0.13 11.8 6.0 0.22 11.0 1.1 3.0 2 1 0 2 2 2 0 Arfaptin-like domain ABC_tran_CTD PF16326.5 gi|433638386|ref|YP_007284146.1| - 0.14 12.4 42.6 4.1 7.7 1.7 9.0 2 2 5 8 8 7 0 ABC transporter C-terminal domain Muted PF14942.6 gi|433638386|ref|YP_007284146.1| - 0.14 12.5 19.8 1.5 9.2 1.8 5.3 1 1 5 6 6 5 0 Organelle biogenesis, Muted-like protein LXG PF04740.12 gi|433638386|ref|YP_007284146.1| - 0.18 11.5 34.7 4.2 7.0 8.9 5.5 2 2 0 3 3 3 0 LXG domain of WXG superfamily MIP-T3_C PF17749.1 gi|433638386|ref|YP_007284146.1| - 0.19 11.7 0.0 0.19 11.7 0.0 4.6 1 1 3 5 5 4 0 Microtubule-binding protein MIP-T3 C-terminal region HAUS-augmin3 PF14932.6 gi|433638386|ref|YP_007284146.1| - 0.2 11.2 24.3 1 8.9 0.3 4.2 2 1 2 5 5 3 0 HAUS augmin-like complex subunit 3 FPP PF05911.11 gi|433638386|ref|YP_007284146.1| - 0.2 9.8 30.1 0.0062 14.8 11.2 2.6 1 1 0 2 2 2 0 Filament-like plant protein, long coiled-coil Lectin_N PF03954.14 gi|433638386|ref|YP_007284146.1| - 0.26 11.0 24.4 0.28 10.9 1.1 6.1 2 1 3 6 6 6 0 Hepatic lectin, N-terminal domain TolA_bind_tri PF16331.5 gi|433638386|ref|YP_007284146.1| - 0.31 11.2 25.0 4.2 7.5 0.0 7.4 4 3 5 9 9 8 0 TolA binding protein trimerisation IFT20 PF14931.6 gi|433638386|ref|YP_007284146.1| - 0.33 11.1 7.3 2.5 8.3 0.0 4.4 2 1 0 4 4 3 0 Intraflagellar transport complex B, subunit 20 Sec8_exocyst PF04048.14 gi|433638386|ref|YP_007284146.1| - 0.4 10.5 10.8 0.17 11.8 0.3 3.8 1 1 1 3 3 3 0 Sec8 exocyst complex component specific domain BRE1 PF08647.11 gi|433638386|ref|YP_007284146.1| - 0.46 10.6 12.7 12 6.0 0.1 5.7 3 1 2 6 6 6 0 BRE1 E3 ubiquitin ligase FAM76 PF16046.5 gi|433638386|ref|YP_007284146.1| - 0.46 9.8 14.3 1.8 7.9 3.1 3.8 1 1 2 4 4 4 0 FAM76 protein Lebercilin PF15619.6 gi|433638386|ref|YP_007284146.1| - 0.5 10.0 16.2 0.69 9.5 0.0 4.9 1 1 4 5 5 3 0 Ciliary protein causing Leber congenital amaurosis disease DASH_Dad2 PF08654.10 gi|433638386|ref|YP_007284146.1| - 0.51 10.8 21.2 6.8 7.2 0.1 7.2 2 2 6 8 8 6 0 DASH complex subunit Dad2 TRAF_BIRC3_bd PF16673.5 gi|433638386|ref|YP_007284146.1| - 0.67 9.8 7.4 29 4.6 0.0 5.4 3 2 1 5 5 3 0 TNF receptor-associated factor BIRC3 binding domain Phage_Mu_Gam PF07352.12 gi|433638386|ref|YP_007284146.1| - 0.74 9.7 10.3 24 4.8 0.7 5.2 4 2 1 5 5 4 0 Bacteriophage Mu Gam like protein FlxA PF14282.6 gi|433638386|ref|YP_007284146.1| - 0.75 9.8 16.3 10 6.1 0.1 6.4 7 1 1 8 8 6 0 FlxA-like protein XhlA PF10779.9 gi|433638386|ref|YP_007284146.1| - 0.77 10.0 31.4 1.7 8.9 0.1 8.8 3 1 4 9 9 9 0 Haemolysin XhlA DUF5320 PF17253.2 gi|433638386|ref|YP_007284146.1| - 0.87 10.7 7.0 39 5.4 0.0 5.2 6 0 0 6 6 3 0 Family of unknown function (DUF5320) CLZ PF16526.5 gi|433638386|ref|YP_007284146.1| - 1.2 9.6 37.1 11 6.5 0.1 9.5 2 1 6 9 9 8 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FAM184 PF15665.5 gi|433638386|ref|YP_007284146.1| - 1.3 8.7 33.4 1.7 8.4 8.0 4.9 1 1 0 4 4 4 0 Family with sequence similarity 184, A and B Syntaxin-6_N PF09177.11 gi|433638386|ref|YP_007284146.1| - 1.5 9.4 48.6 1.3 9.6 2.2 7.8 1 1 6 7 7 6 0 Syntaxin 6, N-terminal YkyA PF10368.9 gi|433638386|ref|YP_007284146.1| - 1.5 8.4 31.2 4 7.1 0.9 5.2 1 1 3 5 5 5 0 Putative cell-wall binding lipoprotein Sec34 PF04136.15 gi|433638386|ref|YP_007284146.1| - 1.6 8.6 23.2 1.7 8.5 0.3 5.8 1 1 5 6 6 6 0 Sec34-like family DUF641 PF04859.12 gi|433638386|ref|YP_007284146.1| - 1.9 8.9 12.9 18 5.7 0.3 5.5 2 1 2 4 4 3 0 Plant protein of unknown function (DUF641) Rx_N PF18052.1 gi|433638386|ref|YP_007284146.1| - 2.8 8.3 34.4 0.045 14.0 2.6 6.5 1 1 6 7 7 5 0 Rx N-terminal domain BRI3BP PF14965.6 gi|433638386|ref|YP_007284146.1| - 4.1 6.9 5.4 4.8 6.7 0.0 3.7 5 1 1 6 6 2 0 Negative regulator of p53/TP53 Cortex-I_coil PF09304.10 gi|433638386|ref|YP_007284146.1| - 5.1 7.4 34.6 0.06 13.6 0.7 6.3 2 1 5 7 7 6 0 Cortexillin I, coiled coil FH2 PF02181.23 gi|433638386|ref|YP_007284146.1| - 5.3 6.0 18.5 1.4 7.9 0.1 4.7 1 1 3 6 6 6 0 Formin Homology 2 Domain TSNAXIP1_N PF15739.5 gi|433638386|ref|YP_007284146.1| - 7.1 7.0 18.3 6.8 7.1 3.0 5.3 4 1 1 6 6 5 0 Translin-associated factor X-interacting N-terminus Nsp1_C PF05064.13 gi|433638386|ref|YP_007284146.1| - 7.8 6.3 25.6 6.7 6.6 0.2 6.4 1 1 6 7 7 7 0 Nsp1-like C-terminal region SidE PF12252.8 gi|433638386|ref|YP_007284146.1| - 8.6 3.7 17.5 1.4 6.3 10.4 2.0 1 1 1 2 2 2 0 Dot/Icm substrate protein PRC PF05239.16 gi|433638387|ref|YP_007284147.1| - 9.8e-12 44.8 1.1 1.3e-11 44.4 1.1 1.1 1 0 0 1 1 1 1 PRC-barrel domain RcnB PF11776.8 gi|433638387|ref|YP_007284147.1| - 0.032 14.3 0.4 0.049 13.7 0.4 1.4 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator DUF2171 PF09939.9 gi|433638387|ref|YP_007284147.1| - 0.034 14.4 0.9 0.21 11.9 0.9 2.1 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) TrkA_N PF02254.18 gi|433638388|ref|YP_007284148.1| - 1.1e-21 77.2 1.8 1.1e-21 77.2 1.8 1.9 2 0 0 2 2 2 1 TrkA-N domain DHH PF01368.20 gi|433638388|ref|YP_007284148.1| - 1.1e-11 44.9 1.4 2.1e-10 40.8 0.3 2.5 2 0 0 2 2 2 1 DHH family Sacchrp_dh_NADP PF03435.18 gi|433638388|ref|YP_007284148.1| - 1.3e-07 32.0 0.1 4.3e-07 30.2 0.1 2.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|433638388|ref|YP_007284148.1| - 5.2e-07 30.2 0.3 5.2e-07 30.2 0.3 2.5 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent DHHA1 PF02272.19 gi|433638388|ref|YP_007284148.1| - 2.4e-06 28.0 0.6 2e-05 25.0 0.0 2.5 2 1 0 2 2 2 1 DHHA1 domain ApbA PF02558.16 gi|433638388|ref|YP_007284148.1| - 1.8e-05 24.4 0.0 4.8e-05 23.1 0.0 1.8 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|433638388|ref|YP_007284148.1| - 0.00014 22.2 3.7 0.00016 22.1 1.4 2.2 1 1 1 2 2 2 1 Putative NAD(P)-binding NAD_binding_2 PF03446.15 gi|433638388|ref|YP_007284148.1| - 0.00022 21.4 0.0 0.00048 20.3 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|433638388|ref|YP_007284148.1| - 0.00036 20.2 0.2 0.00074 19.1 0.2 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_N PF03721.14 gi|433638388|ref|YP_007284148.1| - 0.00044 19.9 0.0 0.0013 18.3 0.0 1.9 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|433638388|ref|YP_007284148.1| - 0.0015 18.6 0.1 0.0046 17.0 0.1 1.8 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Epimerase PF01370.21 gi|433638388|ref|YP_007284148.1| - 0.0023 17.4 0.9 0.01 15.3 0.1 2.3 1 1 2 3 3 3 1 NAD dependent epimerase/dehydratase family NAD_Gly3P_dh_N PF01210.23 gi|433638388|ref|YP_007284148.1| - 0.0028 17.6 0.0 0.0078 16.2 0.0 1.8 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.21 gi|433638388|ref|YP_007284148.1| - 0.0035 16.6 0.2 0.0093 15.3 0.2 1.7 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|433638388|ref|YP_007284148.1| - 0.0043 17.0 0.1 0.013 15.4 0.1 2.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|433638388|ref|YP_007284148.1| - 0.0048 16.2 0.0 0.0073 15.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain DUF364 PF04016.12 gi|433638388|ref|YP_007284148.1| - 0.0085 15.7 0.8 0.037 13.6 0.1 2.4 2 1 1 3 3 3 1 Putative heavy-metal chelation ThiF PF00899.21 gi|433638388|ref|YP_007284148.1| - 0.012 15.0 0.1 0.021 14.2 0.1 1.3 1 1 0 1 1 1 0 ThiF family adh_short_C2 PF13561.6 gi|433638388|ref|YP_007284148.1| - 0.027 14.0 1.4 0.22 11.1 0.4 2.6 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase 2-Hacid_dh_C PF02826.19 gi|433638388|ref|YP_007284148.1| - 0.034 13.5 0.0 0.073 12.4 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|433638388|ref|YP_007284148.1| - 0.047 14.3 0.2 0.17 12.5 0.2 2.1 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|433638388|ref|YP_007284148.1| - 0.058 13.9 1.0 0.21 12.1 0.3 2.3 1 1 1 2 2 2 0 XdhC Rossmann domain DFP PF04127.15 gi|433638388|ref|YP_007284148.1| - 0.068 13.0 1.1 0.27 11.0 0.2 2.2 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein HTH_24 PF13412.6 gi|433638389|ref|YP_007284149.1| - 6.4e-12 44.8 0.7 1.3e-11 43.8 0.7 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|433638389|ref|YP_007284149.1| - 4.3e-11 42.5 1.5 4.3e-11 42.5 1.5 1.9 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|433638389|ref|YP_007284149.1| - 5.4e-07 29.5 0.2 1.8e-06 27.8 0.1 1.8 2 0 0 2 2 2 1 HTH domain HTH_20 PF12840.7 gi|433638389|ref|YP_007284149.1| - 9.1e-06 25.6 0.0 1.8e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|433638389|ref|YP_007284149.1| - 6.7e-05 23.3 0.2 0.00018 21.9 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|433638389|ref|YP_007284149.1| - 0.00039 20.2 0.0 0.00075 19.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|433638389|ref|YP_007284149.1| - 0.00043 20.0 0.0 0.00077 19.2 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|433638389|ref|YP_007284149.1| - 0.0016 18.2 0.1 0.0037 17.0 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|433638389|ref|YP_007284149.1| - 0.028 14.3 0.0 0.075 12.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family GerE PF00196.19 gi|433638389|ref|YP_007284149.1| - 0.03 13.8 0.0 0.052 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_Crp_2 PF13545.6 gi|433638389|ref|YP_007284149.1| - 0.033 14.1 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_CodY PF08222.11 gi|433638389|ref|YP_007284149.1| - 0.091 12.3 0.0 0.21 11.1 0.0 1.6 1 0 0 1 1 1 0 CodY helix-turn-helix domain MarR PF01047.22 gi|433638389|ref|YP_007284149.1| - 0.13 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 MarR family B-block_TFIIIC PF04182.12 gi|433638389|ref|YP_007284149.1| - 0.15 12.2 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_20 PF12840.7 gi|433638390|ref|YP_007284150.1| - 0.066 13.3 0.1 0.63 10.1 0.1 2.1 1 1 0 1 1 1 0 Helix-turn-helix domain HalOD1 PF18545.1 gi|433638391|ref|YP_007284151.1| - 3.3e-14 52.9 0.0 4e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 CorC_HlyC PF03471.17 gi|433638391|ref|YP_007284151.1| - 0.085 12.9 0.0 0.092 12.8 0.0 1.1 1 0 0 1 1 1 0 Transporter associated domain DUF4073 PF13285.6 gi|433638392|ref|YP_007284152.1| - 0.095 12.3 0.3 0.095 12.3 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4073) Chs7 PF12271.8 gi|433638394|ref|YP_007284154.1| - 0.097 12.0 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 Chitin synthase export chaperone DUF4481 PF14800.6 gi|433638394|ref|YP_007284154.1| - 0.13 11.7 0.4 0.13 11.7 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) PyrI PF01948.18 gi|433638395|ref|YP_007284155.1| - 9.6e-34 115.5 0.7 1.2e-33 115.2 0.7 1.1 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|433638395|ref|YP_007284155.1| - 8.7e-12 44.8 0.1 1.8e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|433638396|ref|YP_007284156.1| - 5.6e-45 153.0 0.0 1.3e-44 151.8 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|433638396|ref|YP_007284156.1| - 3.1e-29 102.1 0.0 4.2e-29 101.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ATPase PF06745.13 gi|433638397|ref|YP_007284157.1| - 1e-06 28.3 0.0 0.00026 20.4 0.0 2.2 1 1 1 2 2 2 2 KaiC His_Phos_1 PF00300.22 gi|433638398|ref|YP_007284158.1| - 1.6e-26 93.2 0.3 2.1e-26 92.8 0.3 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) FKBP_C PF00254.28 gi|433638399|ref|YP_007284159.1| - 1.2e-08 35.2 1.5 4e-08 33.5 0.1 2.2 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase ScdA_N PF04405.14 gi|433638399|ref|YP_007284159.1| - 0.0067 16.1 0.5 0.018 14.7 0.5 1.8 1 0 0 1 1 1 1 Domain of Unknown function (DUF542) CYTH PF01928.21 gi|433638400|ref|YP_007284160.1| - 5.6e-36 124.1 8.9 6.4e-36 124.0 8.9 1.0 1 0 0 1 1 1 1 CYTH domain AdoMet_Synthase PF01941.19 gi|433638401|ref|YP_007284161.1| - 9.4e-170 564.7 2.9 1.1e-169 564.5 2.9 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) S-AdoMet_synt_N PF00438.20 gi|433638401|ref|YP_007284161.1| - 0.0076 16.9 0.6 0.022 15.4 0.0 2.1 3 0 0 3 3 3 1 S-adenosylmethionine synthetase, N-terminal domain Asp23 PF03780.13 gi|433638401|ref|YP_007284161.1| - 0.057 13.8 5.8 0.25 11.8 0.5 3.2 2 2 1 3 3 3 0 Asp23 family, cell envelope-related function DUF493 PF04359.14 gi|433638401|ref|YP_007284161.1| - 0.81 10.3 2.1 6.3 7.5 0.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF493) ThiI PF02568.14 gi|433638402|ref|YP_007284162.1| - 8.4e-42 143.0 0.0 1.3e-41 142.4 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|433638402|ref|YP_007284162.1| - 7e-16 58.6 0.0 1.1e-15 58.0 0.0 1.3 1 0 0 1 1 1 1 THUMP domain QueC PF06508.13 gi|433638402|ref|YP_007284162.1| - 9.2e-07 28.6 0.0 0.00019 21.0 0.0 2.4 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|433638402|ref|YP_007284162.1| - 0.0066 15.3 0.0 0.0098 14.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|433638402|ref|YP_007284162.1| - 0.042 13.6 0.0 0.37 10.5 0.0 2.1 1 1 0 1 1 1 0 PP-loop family G_glu_transpept PF01019.21 gi|433638404|ref|YP_007284164.1| - 2.2e-134 449.1 0.0 3.8e-134 448.2 0.0 1.4 1 1 0 1 1 1 1 Gamma-glutamyltranspeptidase IMS PF00817.20 gi|433638405|ref|YP_007284165.1| - 4.7e-39 133.8 0.1 8.6e-39 132.9 0.1 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|433638405|ref|YP_007284165.1| - 2.8e-12 47.3 0.0 1.4e-11 45.1 0.0 2.0 2 1 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|433638405|ref|YP_007284165.1| - 2.4e-07 30.7 0.0 4.8e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|433638405|ref|YP_007284165.1| - 6e-05 23.6 0.2 0.00018 22.0 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|433638405|ref|YP_007284165.1| - 0.0035 17.1 0.0 0.0096 15.7 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|433638405|ref|YP_007284165.1| - 0.017 15.4 0.0 0.036 14.3 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DnaJ PF00226.31 gi|433638406|ref|YP_007284166.1| - 6.1e-20 71.1 0.5 9.6e-20 70.5 0.5 1.3 1 0 0 1 1 1 1 DnaJ domain Lambda_tail_I PF06805.12 gi|433638406|ref|YP_007284166.1| - 0.082 13.3 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I Phage_holin_2_4 PF16082.5 gi|433638406|ref|YP_007284166.1| - 0.15 11.8 7.2 0.16 11.7 0.9 3.2 3 0 0 3 3 3 0 Bacteriophage holin family, superfamily II-like DUF3021 PF11457.8 gi|433638406|ref|YP_007284166.1| - 0.7 10.2 2.8 2.4 8.5 1.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) UDG PF03167.19 gi|433638407|ref|YP_007284167.1| - 1.1e-12 48.2 0.0 1.3e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF4918 PF16265.5 gi|433638407|ref|YP_007284167.1| - 0.1 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) HTH_AsnC-type PF13404.6 gi|433638408|ref|YP_007284168.1| - 1.8e-14 53.2 2.5 1.8e-14 53.2 2.5 2.4 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|433638408|ref|YP_007284168.1| - 8.3e-14 50.9 0.1 1.5e-13 50.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|433638408|ref|YP_007284168.1| - 0.00035 20.6 0.0 0.00084 19.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain YHS PF04945.13 gi|433638408|ref|YP_007284168.1| - 0.00049 20.1 0.2 0.00085 19.4 0.2 1.3 1 0 0 1 1 1 1 YHS domain MarR_2 PF12802.7 gi|433638408|ref|YP_007284168.1| - 0.00054 19.8 0.0 0.00093 19.0 0.0 1.4 1 0 0 1 1 1 1 MarR family zf-FCS PF06467.14 gi|433638408|ref|YP_007284168.1| - 0.00076 19.4 1.4 0.0013 18.6 1.4 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif HTH_23 PF13384.6 gi|433638408|ref|YP_007284168.1| - 0.0012 18.6 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 gi|433638408|ref|YP_007284168.1| - 0.0013 18.1 0.0 0.0027 17.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_5 PF01022.20 gi|433638408|ref|YP_007284168.1| - 0.0016 18.3 0.0 0.0028 17.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|433638408|ref|YP_007284168.1| - 0.0047 16.8 0.0 0.0075 16.2 0.0 1.3 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|433638408|ref|YP_007284168.1| - 0.0051 16.7 0.0 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_28 PF13518.6 gi|433638408|ref|YP_007284168.1| - 0.0055 16.8 0.0 0.012 15.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|433638408|ref|YP_007284168.1| - 0.015 15.3 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|433638408|ref|YP_007284168.1| - 0.018 14.9 0.0 0.031 14.2 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|433638408|ref|YP_007284168.1| - 0.034 14.3 0.0 0.062 13.5 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Mga PF08280.11 gi|433638408|ref|YP_007284168.1| - 0.049 13.7 0.0 0.087 12.9 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4 PF04545.16 gi|433638408|ref|YP_007284168.1| - 0.056 13.0 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 COX15-CtaA PF02628.15 gi|433638409|ref|YP_007284169.1| - 1.8e-09 37.1 27.6 9.8e-05 21.6 19.6 3.3 1 1 1 2 2 2 2 Cytochrome oxidase assembly protein Bax1-I PF01027.20 gi|433638409|ref|YP_007284169.1| - 0.0011 18.9 18.0 0.0011 18.9 18.0 2.4 1 1 1 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 DUF2070 PF09843.9 gi|433638409|ref|YP_007284169.1| - 2.7 6.2 16.9 3.3 5.9 16.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MerC PF03203.14 gi|433638409|ref|YP_007284169.1| - 7 7.1 24.4 0.44 11.0 6.4 2.9 1 1 2 3 3 3 0 MerC mercury resistance protein GCS2 PF04107.13 gi|433638410|ref|YP_007284170.1| - 1.9e-76 257.2 0.1 2.6e-76 256.8 0.1 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) Amidoligase_2 PF12224.8 gi|433638410|ref|YP_007284170.1| - 0.00086 19.1 0.0 0.3 10.7 0.0 2.3 2 0 0 2 2 2 2 Putative amidoligase enzyme Fibrillarin PF01269.17 gi|433638411|ref|YP_007284171.1| - 1.2e-52 178.3 0.0 1.4e-52 178.0 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin PAS_4 PF08448.10 gi|433638411|ref|YP_007284171.1| - 0.035 14.3 0.9 0.15 12.3 0.9 2.0 1 1 0 1 1 1 0 PAS fold Nop PF01798.18 gi|433638412|ref|YP_007284172.1| - 7.7e-37 127.0 0.1 1.5e-36 126.0 0.0 1.4 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin DUF2383 PF09537.10 gi|433638412|ref|YP_007284172.1| - 0.00095 19.5 0.5 0.002 18.5 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF63 PF01889.17 gi|433638413|ref|YP_007284173.1| - 2.7e-28 99.9 9.1 3.2e-27 96.4 6.3 3.0 2 1 0 2 2 2 1 Membrane protein of unknown function DUF63 Cytochrom_B_C PF00032.17 gi|433638413|ref|YP_007284173.1| - 2.9 8.2 7.5 0.37 11.1 0.5 2.8 3 0 0 3 3 3 0 Cytochrome b(C-terminal)/b6/petD Inositol_P PF00459.25 gi|433638414|ref|YP_007284174.1| - 1.7e-52 178.6 4.4 2e-52 178.4 4.4 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family Virulence_fact PF13769.6 gi|433638414|ref|YP_007284174.1| - 0.12 12.6 0.3 0.26 11.5 0.3 1.6 1 0 0 1 1 1 0 Virulence factor Peptidase_M14 PF00246.24 gi|433638415|ref|YP_007284175.1| - 8.3e-11 42.2 0.0 1.6e-10 41.3 0.0 1.4 1 1 0 1 1 1 1 Zinc carboxypeptidase TAT_signal PF10518.9 gi|433638415|ref|YP_007284175.1| - 6.8e-06 25.7 1.5 2.4e-05 24.0 1.5 2.0 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence DUF309 PF03745.14 gi|433638416|ref|YP_007284176.1| - 4.9e-14 51.7 0.1 7.2e-14 51.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF309) AstE_AspA PF04952.14 gi|433638417|ref|YP_007284177.1| - 3.7e-20 72.2 0.1 4.6e-20 71.9 0.1 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M99 PF17033.5 gi|433638417|ref|YP_007284177.1| - 0.1 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Carboxypeptidase controlling helical cell shape catalytic CoA_binding PF02629.19 gi|433638419|ref|YP_007284179.1| - 2e-25 89.3 1.5 3.8e-25 88.4 0.6 2.0 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|433638419|ref|YP_007284179.1| - 1.8e-14 53.8 1.0 3.7e-14 52.8 1.0 1.4 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|433638419|ref|YP_007284179.1| - 2.9e-12 46.6 0.0 4.4e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|433638419|ref|YP_007284179.1| - 3.1e-06 27.7 0.0 3.2e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|433638420|ref|YP_007284180.1| - 4.9e-63 212.4 0.3 8e-63 211.7 0.3 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|433638420|ref|YP_007284180.1| - 6.7e-22 78.0 3.5 1.5e-20 73.6 3.0 2.3 2 1 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|433638420|ref|YP_007284180.1| - 8.4e-13 48.4 0.5 2.2e-12 47.0 0.2 1.8 2 0 0 2 2 2 1 CoA-ligase CPSase_L_D2 PF02786.17 gi|433638420|ref|YP_007284180.1| - 1.1e-11 44.6 4.0 2.9e-09 36.7 0.4 2.5 3 0 0 3 3 3 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|433638420|ref|YP_007284180.1| - 1.8e-08 34.1 0.1 3.7e-08 33.1 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|433638420|ref|YP_007284180.1| - 0.00011 22.1 0.6 0.00023 21.0 0.2 1.7 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UbiA PF01040.18 gi|433638421|ref|YP_007284181.1| - 6.7e-20 71.4 24.4 6.7e-20 71.4 24.4 1.7 1 1 0 1 1 1 1 UbiA prenyltransferase family FAA_hydrolase PF01557.18 gi|433638422|ref|YP_007284182.1| - 1.9e-63 214.1 0.0 2.2e-63 213.8 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|433638422|ref|YP_007284182.1| - 0.0015 19.4 1.8 0.0075 17.1 0.5 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF2437) Lactamase_B_3 PF13483.6 gi|433638423|ref|YP_007284183.1| - 4.9e-35 120.8 0.0 6.3e-35 120.5 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|433638423|ref|YP_007284183.1| - 5.5e-07 29.3 0.6 1.4e-06 28.0 0.6 1.7 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Peptidase_M78 PF06114.13 gi|433638423|ref|YP_007284183.1| - 0.18 11.7 0.0 0.48 10.4 0.0 1.6 2 0 0 2 2 2 0 IrrE N-terminal-like domain Pilin_N PF07790.11 gi|433638424|ref|YP_007284184.1| - 3.2e-05 24.7 2.6 5.5e-05 24.0 1.3 1.9 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal TP6A_N PF04406.14 gi|433638425|ref|YP_007284185.1| - 1.6e-14 53.6 0.4 2.8e-14 52.8 0.4 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase Topo-VIb_trans PF09239.11 gi|433638426|ref|YP_007284186.1| - 3.8e-62 208.8 0.0 7.3e-62 207.9 0.0 1.4 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|433638426|ref|YP_007284186.1| - 1.5e-34 118.6 3.3 6.1e-34 116.6 1.4 2.5 2 0 0 2 2 2 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|433638426|ref|YP_007284186.1| - 5e-14 52.8 0.8 4.7e-13 49.6 0.0 2.8 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|433638426|ref|YP_007284186.1| - 5.5e-12 45.7 0.0 1.8e-11 44.0 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF11 PF01345.18 gi|433638426|ref|YP_007284186.1| - 0.012 15.9 0.0 0.052 13.8 0.0 2.0 1 0 0 1 1 1 0 Domain of unknown function DUF11 HATPase_c_2 PF13581.6 gi|433638426|ref|YP_007284186.1| - 0.053 13.5 5.6 0.11 12.5 0.0 3.1 3 1 0 3 3 3 0 Histidine kinase-like ATPase domain Urease_gamma PF00547.18 gi|433638426|ref|YP_007284186.1| - 0.8 10.1 3.6 0.92 9.9 0.1 2.8 3 0 0 3 3 3 0 Urease, gamma subunit DNA_gyraseB PF00204.25 gi|433638427|ref|YP_007284187.1| - 3.5e-60 202.4 0.4 7.4e-60 201.4 0.4 1.6 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|433638427|ref|YP_007284187.1| - 4.6e-30 103.6 0.0 9.5e-30 102.6 0.0 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|433638427|ref|YP_007284187.1| - 1.1e-23 83.9 0.1 3.4e-23 82.3 0.1 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|433638427|ref|YP_007284187.1| - 7.7e-18 64.6 0.0 2.1e-17 63.2 0.0 1.8 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|433638427|ref|YP_007284187.1| - 0.00013 21.8 0.0 0.00026 20.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PEPcase_2 PF14010.6 gi|433638427|ref|YP_007284187.1| - 0.12 10.9 0.1 0.24 9.9 0.1 1.4 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase DNA_topoisoIV PF00521.20 gi|433638429|ref|YP_007284189.1| - 4e-155 516.9 0.0 5e-155 516.6 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|433638429|ref|YP_007284189.1| - 1.3e-73 242.3 9.5 2.4e-12 46.1 0.0 6.6 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller Nnf1 PF03980.14 gi|433638429|ref|YP_007284189.1| - 0.042 14.2 3.7 0.053 13.9 2.1 2.0 2 0 0 2 2 2 0 Nnf1 Transcrip_act PF04949.13 gi|433638429|ref|YP_007284189.1| - 0.54 10.1 9.4 0.36 10.7 1.2 2.9 3 0 0 3 3 3 0 Transcriptional activator HrcA_DNA-bdg PF03444.15 gi|433638430|ref|YP_007284190.1| - 2.3e-34 116.9 0.0 3.2e-34 116.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.20 gi|433638430|ref|YP_007284190.1| - 1.2e-08 35.2 0.0 1.9e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|433638430|ref|YP_007284190.1| - 1.1e-05 25.2 0.0 1.8e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 HTH domain Spo0M PF07070.11 gi|433638430|ref|YP_007284190.1| - 0.0049 16.4 0.1 0.01 15.4 0.1 1.8 1 1 1 2 2 2 1 SpoOM protein TrmB PF01978.19 gi|433638430|ref|YP_007284190.1| - 0.07 13.0 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repr_C PF02742.15 gi|433638431|ref|YP_007284191.1| - 1.6e-27 95.4 0.9 2.6e-27 94.7 0.9 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|433638431|ref|YP_007284191.1| - 3.7e-17 62.3 0.1 6.5e-17 61.5 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|433638431|ref|YP_007284191.1| - 5.5e-13 49.0 1.8 1.7e-11 44.2 0.2 2.4 2 0 0 2 2 2 1 FeoA domain MarR_2 PF12802.7 gi|433638431|ref|YP_007284191.1| - 6.6e-07 29.1 0.1 2.7e-06 27.2 0.0 2.0 2 0 0 2 2 1 1 MarR family MarR PF01047.22 gi|433638431|ref|YP_007284191.1| - 1.8e-06 27.8 0.0 3.2e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433638431|ref|YP_007284191.1| - 1.3e-05 24.9 0.0 4.6e-05 23.1 0.0 2.0 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|433638431|ref|YP_007284191.1| - 0.00026 20.9 0.1 0.0006 19.7 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF2250 PF10007.9 gi|433638431|ref|YP_007284191.1| - 0.00033 20.7 0.1 0.00069 19.7 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_24 PF13412.6 gi|433638431|ref|YP_007284191.1| - 0.00035 20.1 0.0 0.00065 19.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|433638431|ref|YP_007284191.1| - 0.00051 20.5 0.2 0.0013 19.2 0.2 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|433638431|ref|YP_007284191.1| - 0.00054 20.3 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator GntR PF00392.21 gi|433638431|ref|YP_007284191.1| - 0.0012 18.4 0.0 0.0034 17.0 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|433638431|ref|YP_007284191.1| - 0.0013 18.6 0.0 0.0028 17.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|433638431|ref|YP_007284191.1| - 0.0044 16.8 0.1 0.0083 16.0 0.1 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_12 PF08461.10 gi|433638431|ref|YP_007284191.1| - 0.012 15.5 0.2 0.03 14.2 0.2 1.7 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_20 PF12840.7 gi|433638431|ref|YP_007284191.1| - 0.013 15.6 0.9 0.03 14.4 0.0 2.1 2 0 0 2 2 1 0 Helix-turn-helix domain DUF4423 PF14394.6 gi|433638431|ref|YP_007284191.1| - 0.018 14.8 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_11 PF08279.12 gi|433638431|ref|YP_007284191.1| - 0.022 14.7 0.1 0.051 13.5 0.1 1.6 1 0 0 1 1 1 0 HTH domain Penicillinase_R PF03965.16 gi|433638431|ref|YP_007284191.1| - 0.022 15.1 0.0 0.038 14.3 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor HTH_23 PF13384.6 gi|433638431|ref|YP_007284191.1| - 0.023 14.5 0.0 0.054 13.3 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_5 PF01022.20 gi|433638431|ref|YP_007284191.1| - 0.051 13.5 0.0 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_1 PF00126.27 gi|433638431|ref|YP_007284191.1| - 0.072 13.1 0.0 0.18 11.8 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family FeoC PF09012.10 gi|433638431|ref|YP_007284191.1| - 0.082 13.0 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HrcA_DNA-bdg PF03444.15 gi|433638431|ref|YP_007284191.1| - 0.082 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LexA_DNA_bind PF01726.16 gi|433638431|ref|YP_007284191.1| - 0.11 12.3 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain Put_DNA-bind_N PF06971.13 gi|433638431|ref|YP_007284191.1| - 0.15 12.1 0.0 0.4 10.7 0.0 1.8 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_45 PF14947.6 gi|433638431|ref|YP_007284191.1| - 0.18 11.8 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Arginase PF00491.21 gi|433638432|ref|YP_007284192.1| - 3e-78 263.2 2.0 3.5e-78 262.9 2.0 1.0 1 0 0 1 1 1 1 Arginase family XPB_DRD PF18458.1 gi|433638432|ref|YP_007284192.1| - 0.057 13.3 0.3 0.26 11.2 0.1 2.2 2 0 0 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain ASL_C2 PF14698.6 gi|433638432|ref|YP_007284192.1| - 0.68 10.7 4.5 0.79 10.5 0.3 2.9 3 0 0 3 3 3 0 Argininosuccinate lyase C-terminal Pyr_redox_2 PF07992.14 gi|433638433|ref|YP_007284193.1| - 2.5e-44 151.7 0.2 3e-44 151.4 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433638433|ref|YP_007284193.1| - 1.9e-10 41.2 0.9 1e-08 35.6 0.0 2.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|433638433|ref|YP_007284193.1| - 5.3e-05 23.2 1.3 0.12 12.3 0.0 2.7 3 0 0 3 3 3 2 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|433638433|ref|YP_007284193.1| - 0.04 13.0 0.3 8.5 5.4 0.0 2.4 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DNA_pol3_beta PF00712.19 gi|433638433|ref|YP_007284193.1| - 0.054 13.6 0.1 12 6.1 0.0 2.4 2 0 0 2 2 2 0 DNA polymerase III beta subunit, N-terminal domain Hexapep PF00132.24 gi|433638434|ref|YP_007284194.1| - 2.8e-08 33.2 2.5 6.4e-08 32.0 0.4 2.6 3 0 0 3 3 3 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433638434|ref|YP_007284194.1| - 2.6e-07 30.2 0.9 6.1e-06 25.9 0.6 2.7 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase GARS_A PF01071.19 gi|433638435|ref|YP_007284195.1| - 3.3e-54 183.6 0.0 6.4e-54 182.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|433638435|ref|YP_007284195.1| - 5.1e-22 78.5 0.2 1e-21 77.5 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|433638435|ref|YP_007284195.1| - 1.3e-12 47.9 0.3 3.1e-12 46.6 0.3 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|433638435|ref|YP_007284195.1| - 2e-05 24.7 0.0 3.7e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|433638435|ref|YP_007284195.1| - 0.022 14.0 0.0 0.06 12.6 0.0 1.7 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp CPSase_L_D2 PF02786.17 gi|433638435|ref|YP_007284195.1| - 0.082 12.4 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DEAD PF00270.29 gi|433638436|ref|YP_007284196.1| - 3.8e-18 65.9 0.0 3.1e-17 62.9 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|433638436|ref|YP_007284196.1| - 2e-14 54.1 0.4 3.4e-13 50.1 0.4 2.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|433638436|ref|YP_007284196.1| - 8e-09 35.8 0.0 4.4e-08 33.5 0.0 2.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|433638436|ref|YP_007284196.1| - 2.2e-07 31.0 0.0 3.4e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Methyltransf_24 PF13578.6 gi|433638436|ref|YP_007284196.1| - 0.013 16.5 0.6 0.12 13.4 0.2 2.9 3 0 0 3 3 3 0 Methyltransferase domain RNase_H_2 PF13482.6 gi|433638437|ref|YP_007284197.1| - 3.3e-36 124.8 0.0 4.9e-36 124.2 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily HHH_5 PF14520.6 gi|433638437|ref|YP_007284197.1| - 8.3e-11 42.3 0.4 2.8e-10 40.6 0.1 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|433638437|ref|YP_007284197.1| - 5.8e-05 22.8 1.1 0.42 10.6 0.0 2.8 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|433638437|ref|YP_007284197.1| - 0.0098 15.7 0.0 0.03 14.1 0.0 1.9 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 gi|433638437|ref|YP_007284197.1| - 0.015 15.4 0.0 0.034 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|433638437|ref|YP_007284197.1| - 0.13 12.7 0.8 4.8 7.6 0.0 2.9 2 1 1 3 3 3 0 Helix-hairpin-helix domain Thymidylat_synt PF00303.19 gi|433638438|ref|YP_007284198.1| - 1.7e-94 315.9 0.0 2.1e-94 315.6 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase Barstar PF01337.18 gi|433638438|ref|YP_007284198.1| - 0.092 12.8 0.1 0.092 12.8 0.1 2.2 2 0 0 2 2 2 0 Barstar (barnase inhibitor) DHFR_1 PF00186.19 gi|433638439|ref|YP_007284199.1| - 6.1e-49 165.8 0.0 7.4e-49 165.5 0.0 1.1 1 0 0 1 1 1 1 Dihydrofolate reductase ArAE_2 PF10334.9 gi|433638439|ref|YP_007284199.1| - 0.094 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 TrkA_C PF02080.21 gi|433638440|ref|YP_007284200.1| - 3.8e-26 90.7 3.4 5.1e-13 48.7 0.2 2.6 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|433638440|ref|YP_007284200.1| - 1.8e-17 63.5 12.0 4e-09 36.8 3.2 2.6 2 0 0 2 2 2 2 PhoU domain PhoU_div PF01865.16 gi|433638440|ref|YP_007284200.1| - 0.00042 19.7 1.5 0.26 10.6 0.2 2.3 2 0 0 2 2 2 2 Protein of unknown function DUF47 CLZ PF16526.5 gi|433638440|ref|YP_007284200.1| - 0.025 14.9 2.7 4.2 7.8 0.1 2.6 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels MgtE PF01769.16 gi|433638441|ref|YP_007284201.1| - 1.2e-19 70.9 13.6 1.2e-19 70.9 13.6 1.7 2 0 0 2 2 2 1 Divalent cation transporter Flp_Fap PF04964.14 gi|433638441|ref|YP_007284201.1| - 0.11 12.4 0.1 0.11 12.4 0.1 3.2 4 0 0 4 4 4 0 Flp/Fap pilin component DUF2070 PF09843.9 gi|433638441|ref|YP_007284201.1| - 2.4 6.4 14.8 3 6.0 14.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MgtE PF01769.16 gi|433638442|ref|YP_007284202.1| - 1.7e-21 76.8 7.1 1.7e-21 76.8 7.1 1.5 2 0 0 2 2 2 1 Divalent cation transporter Thioredox_DsbH PF03190.15 gi|433638443|ref|YP_007284203.1| - 5.9e-73 244.2 0.0 1.4e-72 243.0 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|433638443|ref|YP_007284203.1| - 8.8e-10 38.6 0.0 1.6e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like GlcNAc_2-epim PF07221.11 gi|433638443|ref|YP_007284203.1| - 6.6e-07 28.9 0.0 0.022 14.0 0.0 2.3 2 0 0 2 2 2 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) HTH_Tnp_ISL3 PF13542.6 gi|433638443|ref|YP_007284203.1| - 0.029 13.8 0.0 0.48 9.9 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Glyco_hydro_88 PF07470.13 gi|433638443|ref|YP_007284203.1| - 0.051 12.6 0.0 0.75 8.8 0.0 2.4 2 0 0 2 2 2 0 Glycosyl Hydrolase Family 88 HTH_10 PF04967.12 gi|433638443|ref|YP_007284203.1| - 0.16 11.8 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain Thioredoxin_9 PF14595.6 gi|433638444|ref|YP_007284204.1| - 2.1e-08 34.0 0.0 2.9e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin PF00085.20 gi|433638444|ref|YP_007284204.1| - 4.3e-08 33.1 0.0 4.6e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Pheromone PF08015.11 gi|433638444|ref|YP_007284204.1| - 0.11 13.6 0.0 0.2 12.7 0.0 1.4 1 0 0 1 1 1 0 Fungal mating-type pheromone PALP PF00291.25 gi|433638445|ref|YP_007284205.1| - 9e-61 205.8 2.5 1.2e-60 205.5 2.5 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme adh_short PF00106.25 gi|433638445|ref|YP_007284205.1| - 0.076 12.5 0.2 0.16 11.4 0.2 1.5 1 0 0 1 1 1 0 short chain dehydrogenase ADH_zinc_N PF00107.26 gi|433638445|ref|YP_007284205.1| - 0.2 11.6 1.0 0.81 9.7 0.6 2.1 2 1 0 2 2 2 0 Zinc-binding dehydrogenase Presenilin PF01080.17 gi|433638447|ref|YP_007284207.1| - 0.084 11.6 0.0 0.084 11.6 0.0 1.4 2 0 0 2 2 2 0 Presenilin Herpes_LMP1 PF05297.11 gi|433638447|ref|YP_007284207.1| - 0.14 11.3 0.1 0.14 11.3 0.1 2.1 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) MGC-24 PF05283.11 gi|433638447|ref|YP_007284207.1| - 4.7 7.7 6.9 3.6 8.0 2.0 2.1 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF751 PF05421.11 gi|433638448|ref|YP_007284208.1| - 0.22 12.3 1.1 0.63 10.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF751) IMPDH PF00478.25 gi|433638449|ref|YP_007284209.1| - 2.3e-139 464.3 6.1 2.6e-139 464.1 6.1 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|433638449|ref|YP_007284209.1| - 6.2e-22 77.8 5.4 1.4e-10 41.5 0.5 2.9 2 0 0 2 2 2 2 CBS domain NMO PF03060.15 gi|433638449|ref|YP_007284209.1| - 5e-14 52.4 2.9 2e-07 30.7 0.9 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.18 gi|433638449|ref|YP_007284209.1| - 2.2e-09 36.8 4.4 4.3e-09 35.9 4.4 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|433638449|ref|YP_007284209.1| - 3.8e-05 23.0 4.7 7.9e-05 21.9 4.7 1.5 1 0 0 1 1 1 1 Conserved region in glutamate synthase ThiG PF05690.14 gi|433638449|ref|YP_007284209.1| - 0.0001 21.7 1.7 0.0001 21.7 1.7 2.0 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG DHO_dh PF01180.21 gi|433638449|ref|YP_007284209.1| - 0.0001 21.6 1.5 0.00018 20.8 1.5 1.4 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|433638449|ref|YP_007284209.1| - 0.00038 20.0 3.4 0.0012 18.4 3.3 1.6 1 1 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|433638449|ref|YP_007284209.1| - 0.0025 16.9 0.2 0.0046 16.1 0.2 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 gi|433638449|ref|YP_007284209.1| - 0.033 13.6 0.5 0.15 11.5 0.2 2.0 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DUF2259 PF10016.9 gi|433638450|ref|YP_007284210.1| - 0.13 12.2 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) YcaO PF02624.16 gi|433638451|ref|YP_007284211.1| - 6.9e-52 176.7 6.3 9.4e-52 176.3 6.3 1.2 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding RNA_binding PF01877.17 gi|433638452|ref|YP_007284212.1| - 4.1e-31 107.7 0.0 5.1e-31 107.4 0.0 1.1 1 0 0 1 1 1 1 RNA binding DHH PF01368.20 gi|433638454|ref|YP_007284214.1| - 9e-13 48.3 0.5 1.7e-12 47.5 0.5 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|433638454|ref|YP_007284214.1| - 1.7e-12 48.0 0.0 3.1e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 DHHA1 domain ATP19 PF11022.8 gi|433638455|ref|YP_007284215.1| - 0.62 10.5 1.7 1.2 9.6 0.2 2.2 1 1 1 2 2 2 0 ATP synthase subunit K ECH_1 PF00378.20 gi|433638456|ref|YP_007284216.1| - 1.9e-46 158.4 0.0 2.1e-46 158.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433638456|ref|YP_007284216.1| - 8.6e-29 101.1 0.1 2.6e-27 96.2 0.1 1.9 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Pyr_redox_2 PF07992.14 gi|433638457|ref|YP_007284217.1| - 1.7e-10 40.6 0.0 1.4e-05 24.5 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|433638457|ref|YP_007284217.1| - 1.8e-09 37.7 0.0 0.0018 17.9 0.0 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|433638457|ref|YP_007284217.1| - 7.8e-08 31.9 0.1 0.0002 20.7 0.1 2.1 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|433638457|ref|YP_007284217.1| - 6.1e-06 25.2 0.6 0.0039 16.0 1.8 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|433638457|ref|YP_007284217.1| - 6.5e-06 25.5 0.0 6.7e-05 22.1 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 gi|433638457|ref|YP_007284217.1| - 2.1e-05 24.1 0.2 3.5e-05 23.4 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|433638457|ref|YP_007284217.1| - 5.1e-05 22.3 0.2 0.0087 15.0 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|433638457|ref|YP_007284217.1| - 0.00012 22.1 1.2 0.26 11.3 0.0 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|433638457|ref|YP_007284217.1| - 0.0019 18.4 0.8 0.0062 16.7 0.8 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|433638457|ref|YP_007284217.1| - 0.0026 16.9 5.6 0.003 16.7 0.3 2.7 3 0 0 3 3 3 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|433638457|ref|YP_007284217.1| - 0.0058 15.7 1.1 0.05 12.7 1.1 2.2 1 1 0 1 1 1 1 Lycopene cyclase protein Amino_oxidase PF01593.24 gi|433638457|ref|YP_007284217.1| - 0.008 15.5 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|433638457|ref|YP_007284217.1| - 0.038 13.3 0.1 0.058 12.7 0.1 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|433638457|ref|YP_007284217.1| - 0.055 12.7 0.0 0.086 12.1 0.0 1.2 1 0 0 1 1 1 0 Thi4 family Pyr_redox_3 PF13738.6 gi|433638457|ref|YP_007284217.1| - 0.098 11.9 1.0 0.18 11.0 1.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433638457|ref|YP_007284217.1| - 0.14 12.7 0.1 1.8 9.1 0.3 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PsaX PF08078.12 gi|433638459|ref|YP_007284219.1| - 0.06 13.3 3.9 0.094 12.7 3.9 1.3 1 0 0 1 1 1 0 PsaX family Copper-bind PF00127.20 gi|433638460|ref|YP_007284220.1| - 4.2e-07 30.3 0.3 8.3e-07 29.4 0.0 1.6 2 0 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family DUF2721 PF11026.8 gi|433638461|ref|YP_007284221.1| - 0.19 11.6 1.3 0.23 11.4 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Histidinol_dh PF00815.20 gi|433638462|ref|YP_007284222.1| - 1.4e-155 518.4 1.3 1.7e-155 518.1 1.3 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase RHH_1 PF01402.21 gi|433638462|ref|YP_007284222.1| - 5.9 7.0 6.0 1.1 9.3 0.1 3.0 4 0 0 4 4 4 0 Ribbon-helix-helix protein, copG family Fe-S_biosyn PF01521.20 gi|433638463|ref|YP_007284223.1| - 4.4e-19 68.7 0.0 4.9e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Dodecin PF07311.12 gi|433638464|ref|YP_007284224.1| - 9.9e-21 73.8 0.8 1.1e-20 73.6 0.8 1.0 1 0 0 1 1 1 1 Dodecin DUF2238 PF09997.9 gi|433638465|ref|YP_007284225.1| - 0.0004 20.2 2.1 0.00066 19.5 2.1 1.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) Arabinose_trans PF04602.12 gi|433638466|ref|YP_007284226.1| - 0.013 14.3 11.1 0.017 13.9 11.1 1.2 1 0 0 1 1 1 0 Mycobacterial cell wall arabinan synthesis protein DUF2238 PF09997.9 gi|433638466|ref|YP_007284226.1| - 0.54 10.1 8.7 0.045 13.5 3.8 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2238) YdjM PF04307.14 gi|433638467|ref|YP_007284227.1| - 1.8e-14 53.4 24.6 1.5e-13 50.5 24.6 2.2 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Aminotran_5 PF00266.19 gi|433638468|ref|YP_007284228.1| - 4.1e-34 118.1 0.0 5.3e-34 117.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|433638468|ref|YP_007284228.1| - 0.0002 20.0 0.0 0.00028 19.6 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|433638468|ref|YP_007284228.1| - 0.0016 17.9 0.1 0.0024 17.2 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family eIF-5_eIF-2B PF01873.17 gi|433638470|ref|YP_007284230.1| - 0.031 14.1 1.2 0.041 13.7 1.2 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 Nudix_N_2 PF14803.6 gi|433638470|ref|YP_007284230.1| - 0.046 13.6 0.3 7.8 6.5 0.0 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-ribbon_3 PF13248.6 gi|433638470|ref|YP_007284230.1| - 0.073 12.5 1.5 2.5 7.6 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain NOB1_Zn_bind PF08772.11 gi|433638470|ref|YP_007284230.1| - 0.099 12.8 1.4 0.15 12.2 1.4 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Pertussis_S1 PF02917.14 gi|433638470|ref|YP_007284230.1| - 0.099 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Pertussis toxin, subunit 1 Rubredoxin_2 PF18073.1 gi|433638470|ref|YP_007284230.1| - 2.9 7.7 8.0 20 5.0 3.8 2.5 2 1 0 2 2 2 0 Rubredoxin metal binding domain Usp PF00582.26 gi|433638471|ref|YP_007284231.1| - 4.5e-08 33.7 0.9 0.00052 20.5 0.1 2.1 1 1 1 2 2 2 2 Universal stress protein family DUF2492 PF10678.9 gi|433638471|ref|YP_007284231.1| - 0.14 12.5 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) PIF6 PF05341.11 gi|433638471|ref|YP_007284231.1| - 0.17 12.1 0.1 0.36 11.0 0.1 1.5 1 0 0 1 1 1 0 Per os infectivity factor 6 MS_channel PF00924.18 gi|433638472|ref|YP_007284232.1| - 3e-33 115.1 0.1 4.1e-33 114.7 0.1 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel EI24 PF07264.11 gi|433638472|ref|YP_007284232.1| - 0.0011 19.3 3.5 0.0055 17.0 3.6 1.9 1 1 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) PRA1 PF03208.19 gi|433638472|ref|YP_007284232.1| - 0.06 13.0 3.0 0.099 12.3 3.0 1.3 1 0 0 1 1 1 0 PRA1 family protein DUF3523 PF12037.8 gi|433638472|ref|YP_007284232.1| - 0.11 11.8 0.2 0.28 10.5 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3523) DUF1700 PF08006.11 gi|433638472|ref|YP_007284232.1| - 0.99 8.9 6.0 1.7 8.1 6.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF2909 PF11137.8 gi|433638472|ref|YP_007284232.1| - 1 9.3 9.3 6 6.9 0.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2909) GFO_IDH_MocA PF01408.22 gi|433638473|ref|YP_007284233.1| - 9.9e-25 87.7 0.0 1.9e-24 86.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|433638473|ref|YP_007284233.1| - 8.3e-09 35.5 0.0 1.6e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain 2-Hacid_dh_C PF02826.19 gi|433638473|ref|YP_007284233.1| - 0.00093 18.6 0.0 0.0015 17.9 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|433638473|ref|YP_007284233.1| - 0.039 14.6 0.0 0.074 13.7 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|433638473|ref|YP_007284233.1| - 0.041 14.6 0.0 0.082 13.6 0.0 1.5 1 0 0 1 1 1 0 CoA binding domain TrkA_N PF02254.18 gi|433638473|ref|YP_007284233.1| - 0.09 13.0 0.1 0.42 10.9 0.1 2.2 1 1 0 1 1 1 0 TrkA-N domain AP_endonuc_2 PF01261.24 gi|433638474|ref|YP_007284234.1| - 2e-34 118.9 0.9 3e-34 118.3 0.9 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 gi|433638474|ref|YP_007284234.1| - 5.8e-19 67.6 0.1 1.2e-18 66.5 0.1 1.6 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus GFO_IDH_MocA PF01408.22 gi|433638475|ref|YP_007284235.1| - 6.6e-14 52.8 0.0 1.1e-13 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|433638475|ref|YP_007284235.1| - 7.6e-10 38.8 0.0 1.4e-09 38.0 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain HD PF01966.22 gi|433638476|ref|YP_007284236.1| - 2.8e-09 37.2 1.8 5.6e-09 36.3 1.8 1.5 1 0 0 1 1 1 1 HD domain Amidohydro_1 PF01979.20 gi|433638477|ref|YP_007284237.1| - 3.6e-31 108.7 0.0 3.1e-21 76.1 0.0 2.0 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|433638477|ref|YP_007284237.1| - 1.7e-10 41.0 3.4 1.3e-08 34.8 0.4 2.4 1 1 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|433638477|ref|YP_007284237.1| - 8.4e-08 31.9 0.0 1.2e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Usp PF00582.26 gi|433638478|ref|YP_007284238.1| - 1.1e-36 126.4 0.8 1.4e-36 126.1 0.8 1.1 1 0 0 1 1 1 1 Universal stress protein family BPL_LplA_LipB PF03099.19 gi|433638479|ref|YP_007284239.1| - 4.8e-15 55.6 0.0 7.4e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|433638479|ref|YP_007284239.1| - 2.5e-13 49.7 0.0 5.4e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.17 gi|433638479|ref|YP_007284239.1| - 8.4e-11 41.6 0.1 1.7e-10 40.6 0.1 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_20 PF12840.7 gi|433638479|ref|YP_007284239.1| - 2.6e-07 30.6 0.2 2.1e-06 27.7 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433638479|ref|YP_007284239.1| - 1e-05 25.0 0.0 3.2e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433638479|ref|YP_007284239.1| - 0.00017 21.3 0.0 0.00028 20.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|433638479|ref|YP_007284239.1| - 0.0016 18.3 0.1 0.0071 16.2 0.0 2.1 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|433638479|ref|YP_007284239.1| - 0.032 14.1 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 gi|433638479|ref|YP_007284239.1| - 0.044 13.8 0.3 3.9 7.6 0.0 2.9 2 1 1 3 3 3 0 Winged helix-turn helix HTH_AsnC-type PF13404.6 gi|433638479|ref|YP_007284239.1| - 0.056 13.3 0.7 0.25 11.2 0.0 2.5 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_1 PF00126.27 gi|433638479|ref|YP_007284239.1| - 0.065 13.2 0.1 0.23 11.4 0.1 1.9 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family tRNA-synt_1b PF00579.25 gi|433638480|ref|YP_007284240.1| - 3.5e-51 174.3 0.0 4.4e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|433638480|ref|YP_007284240.1| - 0.019 13.9 0.0 3.9 6.3 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) DS PF01916.17 gi|433638481|ref|YP_007284241.1| - 1.3e-100 336.3 0.0 1.5e-100 336.2 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Acetyltransf_16 PF05301.11 gi|433638481|ref|YP_007284241.1| - 0.21 11.4 0.0 0.3 10.8 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Methyltransf_11 PF08241.12 gi|433638483|ref|YP_007284243.1| - 2e-17 63.6 0.0 2.9e-17 63.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433638483|ref|YP_007284243.1| - 5.4e-14 52.7 0.0 8.8e-14 52.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638483|ref|YP_007284243.1| - 1.2e-06 28.3 0.0 1.6e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638483|ref|YP_007284243.1| - 1.8e-05 24.7 0.0 5.4e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433638483|ref|YP_007284243.1| - 0.00015 21.2 0.0 0.00023 20.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DREV PF05219.12 gi|433638483|ref|YP_007284243.1| - 0.0037 16.4 0.0 0.0048 16.0 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MTS PF05175.14 gi|433638483|ref|YP_007284243.1| - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain Chitin_bind_4 PF00379.23 gi|433638483|ref|YP_007284243.1| - 0.12 12.9 0.5 0.5 10.9 0.1 2.2 3 0 0 3 3 3 0 Insect cuticle protein Methyltransf_12 PF08242.12 gi|433638483|ref|YP_007284243.1| - 0.16 12.7 0.0 0.37 11.6 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain DrsE PF02635.15 gi|433638485|ref|YP_007284245.1| - 4.1e-12 46.5 0.0 4.9e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|433638485|ref|YP_007284245.1| - 3.5e-05 23.7 0.0 3.7e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family Rop-like PF05082.13 gi|433638485|ref|YP_007284245.1| - 0.12 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Rop-like 4HBT PF03061.22 gi|433638486|ref|YP_007284246.1| - 6.8e-17 61.6 0.6 9.6e-17 61.1 0.6 1.3 1 0 0 1 1 1 1 Thioesterase superfamily TraB PF01963.17 gi|433638487|ref|YP_007284247.1| - 3.2e-26 92.8 0.0 2.1e-15 57.3 0.0 2.4 2 0 0 2 2 2 2 TraB family Peptidase_M50 PF02163.22 gi|433638488|ref|YP_007284248.1| - 4.2e-05 22.9 13.0 0.014 14.6 0.5 3.2 1 1 1 2 2 2 2 Peptidase family M50 DUF3021 PF11457.8 gi|433638488|ref|YP_007284248.1| - 2 8.7 8.2 1.2 9.5 4.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3021) AIRS_C PF02769.22 gi|433638489|ref|YP_007284249.1| - 1.7e-19 70.5 0.0 3.1e-19 69.6 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|433638489|ref|YP_007284249.1| - 3e-13 50.2 1.2 5.2e-13 49.5 1.2 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Macro PF01661.21 gi|433638490|ref|YP_007284250.1| - 6.9e-27 93.8 0.0 8.3e-27 93.6 0.0 1.1 1 0 0 1 1 1 1 Macro domain Ferritin PF00210.24 gi|433638492|ref|YP_007284252.1| - 3.3e-31 108.1 2.6 3.9e-31 107.9 2.6 1.1 1 0 0 1 1 1 1 Ferritin-like domain NAD_binding_2 PF03446.15 gi|433638492|ref|YP_007284252.1| - 0.1 12.8 0.3 1.9 8.7 0.1 2.5 1 1 2 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase TMP-TENI PF02581.17 gi|433638493|ref|YP_007284253.1| - 7.4e-60 201.4 2.6 8.5e-60 201.2 2.6 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase NMO PF03060.15 gi|433638493|ref|YP_007284253.1| - 0.0012 18.3 10.0 0.0018 17.8 9.4 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|433638493|ref|YP_007284253.1| - 0.0017 17.7 2.0 0.0022 17.2 2.0 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase ThiG PF05690.14 gi|433638493|ref|YP_007284253.1| - 0.0031 16.9 5.5 0.0031 16.9 5.5 1.9 2 1 1 3 3 3 1 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|433638493|ref|YP_007284253.1| - 0.004 16.4 2.5 0.004 16.4 2.5 2.1 2 2 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.12 gi|433638493|ref|YP_007284253.1| - 0.014 14.6 0.8 0.023 13.9 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF561) Dus PF01207.17 gi|433638493|ref|YP_007284253.1| - 0.097 11.7 0.7 0.19 10.8 0.4 1.6 1 1 1 2 2 2 0 Dihydrouridine synthase (Dus) HK PF02110.15 gi|433638494|ref|YP_007284254.1| - 1.6e-64 217.6 2.6 1.9e-64 217.4 2.6 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|433638494|ref|YP_007284254.1| - 2.3e-05 23.9 0.8 3.4e-05 23.4 0.8 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|433638494|ref|YP_007284254.1| - 0.0028 17.2 3.0 0.0035 16.8 2.8 1.2 1 1 0 1 1 1 1 Carbohydrate kinase PapA_C PF16911.5 gi|433638495|ref|YP_007284255.1| - 0.0015 18.6 0.3 0.0021 18.1 0.3 1.2 1 0 0 1 1 1 1 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus tRNA_edit PF04073.15 gi|433638496|ref|YP_007284256.1| - 8.2e-31 106.7 0.0 9.7e-31 106.4 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain DUF4012 PF13196.6 gi|433638496|ref|YP_007284256.1| - 0.15 12.5 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4012) ZnuA PF01297.17 gi|433638497|ref|YP_007284257.1| - 1.5e-45 155.6 0.3 1.7e-45 155.4 0.3 1.1 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Zip PF02535.22 gi|433638497|ref|YP_007284257.1| - 0.012 14.9 2.9 0.013 14.7 2.9 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter SDA1 PF05285.12 gi|433638497|ref|YP_007284257.1| - 0.5 9.7 22.1 0.7 9.3 22.1 1.2 1 0 0 1 1 1 0 SDA1 ABC_tran PF00005.27 gi|433638498|ref|YP_007284258.1| - 7.3e-30 104.3 0.0 1.1e-29 103.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638498|ref|YP_007284258.1| - 1.4e-11 44.8 0.8 5.8e-05 23.1 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|433638498|ref|YP_007284258.1| - 4.3e-05 24.0 0.3 7.9e-05 23.1 0.3 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|433638498|ref|YP_007284258.1| - 0.0011 18.4 0.0 0.0028 17.1 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433638498|ref|YP_007284258.1| - 0.0029 17.3 0.1 0.006 16.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|433638498|ref|YP_007284258.1| - 0.0046 17.2 0.1 0.018 15.3 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|433638498|ref|YP_007284258.1| - 0.0053 16.9 0.1 0.036 14.2 0.1 2.1 1 1 0 1 1 1 1 AAA domain MobB PF03205.14 gi|433638498|ref|YP_007284258.1| - 0.0067 16.3 0.0 0.093 12.6 0.0 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 gi|433638498|ref|YP_007284258.1| - 0.0089 16.2 0.6 0.19 12.0 0.6 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 gi|433638498|ref|YP_007284258.1| - 0.0094 15.7 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|433638498|ref|YP_007284258.1| - 0.012 15.5 0.0 0.042 13.7 0.0 1.8 1 1 1 2 2 2 0 NTPase AAA_23 PF13476.6 gi|433638498|ref|YP_007284258.1| - 0.013 16.0 0.0 0.018 15.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|433638498|ref|YP_007284258.1| - 0.045 12.8 0.1 0.14 11.1 0.0 1.7 2 1 0 2 2 2 0 Type II/IV secretion system protein Peripla_BP_4 PF13407.6 gi|433638498|ref|YP_007284258.1| - 0.047 13.3 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain AAA_30 PF13604.6 gi|433638498|ref|YP_007284258.1| - 0.049 13.3 0.1 0.15 11.8 0.1 2.1 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|433638498|ref|YP_007284258.1| - 0.077 12.4 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI cobW PF02492.19 gi|433638498|ref|YP_007284258.1| - 0.1 12.2 0.2 0.27 10.8 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.14 gi|433638498|ref|YP_007284258.1| - 0.11 12.5 0.2 0.34 10.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|433638498|ref|YP_007284258.1| - 0.11 12.9 0.1 0.35 11.3 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|433638498|ref|YP_007284258.1| - 0.16 11.9 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain ABC-3 PF00950.17 gi|433638499|ref|YP_007284259.1| - 6e-56 189.8 28.6 6e-56 189.8 28.6 1.9 2 0 0 2 2 2 1 ABC 3 transport family FecCD PF01032.18 gi|433638499|ref|YP_007284259.1| - 2.1e-06 27.0 28.9 2.1e-06 27.0 28.9 2.2 1 1 0 2 2 2 1 FecCD transport family CobA_CobO_BtuR PF02572.15 gi|433638500|ref|YP_007284260.1| - 2e-50 171.4 0.0 2.4e-50 171.2 0.0 1.1 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ABC_tran PF00005.27 gi|433638501|ref|YP_007284261.1| - 9.4e-27 94.2 0.0 1.4e-26 93.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638501|ref|YP_007284261.1| - 9.9e-10 38.7 0.3 0.00031 20.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|433638501|ref|YP_007284261.1| - 0.0011 18.8 0.1 0.36 10.5 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA PF00004.29 gi|433638501|ref|YP_007284261.1| - 0.0029 18.0 0.5 0.037 14.5 0.5 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|433638501|ref|YP_007284261.1| - 0.0059 17.1 0.1 0.012 16.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|433638501|ref|YP_007284261.1| - 0.03 14.6 0.0 0.072 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|433638501|ref|YP_007284261.1| - 0.049 12.9 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 gi|433638501|ref|YP_007284261.1| - 0.082 13.3 0.1 0.65 10.3 0.1 2.1 1 1 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 gi|433638501|ref|YP_007284261.1| - 0.32 9.6 0.8 8.3 4.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain DIM PF08194.12 gi|433638502|ref|YP_007284262.1| - 1.4 9.2 8.4 2.5 8.4 0.3 3.8 3 0 0 3 3 3 0 DIM protein GATase_3 PF07685.14 gi|433638503|ref|YP_007284263.1| - 7.7e-39 133.3 0.0 1.2e-38 132.7 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|433638503|ref|YP_007284263.1| - 6.9e-23 81.1 0.0 1.1e-22 80.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|433638503|ref|YP_007284263.1| - 7e-18 65.2 0.0 6.1e-11 42.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF1611 PF07755.11 gi|433638503|ref|YP_007284263.1| - 0.012 14.9 0.4 0.29 10.4 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain Peptidase_S58 PF03576.14 gi|433638504|ref|YP_007284264.1| - 0.063 12.8 1.3 0.097 12.2 1.3 1.2 1 0 0 1 1 1 0 Peptidase family S58 MTH865 PF07747.11 gi|433638505|ref|YP_007284265.1| - 2.8e-31 107.1 0.2 3.3e-31 106.9 0.2 1.1 1 0 0 1 1 1 1 MTH865-like family zinc_ribbon_2 PF13240.6 gi|433638506|ref|YP_007284266.1| - 0.00015 21.3 2.9 0.00021 20.9 2.9 1.2 1 0 0 1 1 1 1 zinc-ribbon domain HypA PF01155.19 gi|433638506|ref|YP_007284266.1| - 0.0002 21.3 1.7 0.00023 21.1 1.7 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|433638506|ref|YP_007284266.1| - 0.00038 20.4 0.3 0.0004 20.3 0.3 1.1 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|433638506|ref|YP_007284266.1| - 0.00073 20.2 0.3 0.00078 20.1 0.3 1.1 1 0 0 1 1 1 1 zinc-ribbon family TackOD1 PF18551.1 gi|433638506|ref|YP_007284266.1| - 0.0013 18.4 0.3 0.0013 18.4 0.3 1.0 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zf-ribbon_3 PF13248.6 gi|433638506|ref|YP_007284266.1| - 0.0055 16.1 3.1 0.0083 15.5 2.3 1.7 1 1 1 2 2 2 1 zinc-ribbon domain RecR PF02132.15 gi|433638506|ref|YP_007284266.1| - 0.0065 16.0 3.0 0.0089 15.6 3.0 1.2 1 0 0 1 1 1 1 RecR protein DUF35_N PF12172.8 gi|433638506|ref|YP_007284266.1| - 0.0084 16.0 2.7 0.011 15.5 2.7 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ISL3 PF14690.6 gi|433638506|ref|YP_007284266.1| - 0.0095 16.6 4.1 0.32 11.7 0.1 2.1 1 1 1 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS91 PF14319.6 gi|433638506|ref|YP_007284266.1| - 0.018 15.0 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn-ribbon_8 PF09723.10 gi|433638506|ref|YP_007284266.1| - 0.019 15.1 5.6 0.084 13.0 5.3 1.9 1 1 1 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|433638506|ref|YP_007284266.1| - 0.024 14.1 3.1 0.19 11.3 3.5 1.9 1 1 1 2 2 2 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|433638506|ref|YP_007284266.1| - 0.051 13.3 2.5 0.099 12.4 2.5 1.5 1 1 0 1 1 1 0 Rubredoxin metal binding domain NRDD PF13597.6 gi|433638506|ref|YP_007284266.1| - 0.052 12.3 2.2 0.056 12.2 2.2 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Lar_restr_allev PF14354.6 gi|433638506|ref|YP_007284266.1| - 0.052 13.9 1.3 0.44 11.0 0.1 2.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar UPF0547 PF10571.9 gi|433638506|ref|YP_007284266.1| - 0.079 13.1 3.2 0.27 11.4 3.6 1.6 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1 PF03811.13 gi|433638506|ref|YP_007284266.1| - 0.09 12.5 3.5 0.1 12.4 0.5 2.1 2 0 0 2 2 2 0 InsA N-terminal domain DUF2688 PF10892.8 gi|433638506|ref|YP_007284266.1| - 0.19 11.2 5.8 0.68 9.4 5.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2688) Zn_Tnp_IS1595 PF12760.7 gi|433638506|ref|YP_007284266.1| - 0.26 11.3 4.0 1.8 8.6 0.2 2.1 1 1 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|433638506|ref|YP_007284266.1| - 0.4 10.5 3.1 1.1 9.1 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|433638506|ref|YP_007284266.1| - 0.64 9.7 2.8 4 7.1 0.2 2.1 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-RRN7 PF11781.8 gi|433638506|ref|YP_007284266.1| - 0.91 9.3 6.2 7.7 6.3 1.4 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 OrfB_Zn_ribbon PF07282.11 gi|433638506|ref|YP_007284266.1| - 1.8 8.5 5.5 14 5.7 0.8 1.9 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Reprolysin_2 PF13574.6 gi|433638508|ref|YP_007284268.1| - 0.00037 20.4 0.1 0.00087 19.2 0.1 1.6 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 gi|433638508|ref|YP_007284268.1| - 0.0018 18.5 0.0 0.0024 18.0 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 gi|433638508|ref|YP_007284268.1| - 0.005 17.3 0.4 0.0071 16.9 0.4 1.4 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|433638508|ref|YP_007284268.1| - 0.0066 15.4 0.0 0.0096 14.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_4 PF13583.6 gi|433638508|ref|YP_007284268.1| - 0.0087 15.7 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Astacin PF01400.24 gi|433638508|ref|YP_007284268.1| - 0.011 15.4 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Astacin (Peptidase family M12A) Peptidase_M10 PF00413.24 gi|433638508|ref|YP_007284268.1| - 0.02 14.7 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Matrixin DUF4953 PF16313.5 gi|433638508|ref|YP_007284268.1| - 0.047 12.9 0.1 0.069 12.4 0.1 1.1 1 0 0 1 1 1 0 Met-zincin Metallopep PF12044.8 gi|433638508|ref|YP_007284268.1| - 0.078 11.6 0.3 0.11 11.0 0.3 1.1 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M54 PF07998.11 gi|433638508|ref|YP_007284268.1| - 0.085 12.8 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Peptidase family M54 HTH_24 PF13412.6 gi|433638509|ref|YP_007284269.1| - 4.4e-06 26.2 0.0 6.6e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433638509|ref|YP_007284269.1| - 0.00023 20.9 0.0 0.00032 20.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|433638509|ref|YP_007284269.1| - 0.00093 19.0 0.0 0.0023 17.8 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|433638509|ref|YP_007284269.1| - 0.011 15.8 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.7 gi|433638509|ref|YP_007284269.1| - 0.013 15.4 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|433638509|ref|YP_007284269.1| - 0.025 14.6 0.0 0.05 13.7 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|433638509|ref|YP_007284269.1| - 0.049 13.6 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix B-block_TFIIIC PF04182.12 gi|433638509|ref|YP_007284269.1| - 0.1 12.8 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Trehalose_PPase PF02358.16 gi|433638510|ref|YP_007284270.1| - 4.5e-36 124.1 0.0 5.8e-36 123.8 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase S6PP PF05116.13 gi|433638510|ref|YP_007284270.1| - 0.00037 20.1 0.0 0.1 12.1 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase_3 PF08282.12 gi|433638510|ref|YP_007284270.1| - 0.0054 16.5 0.0 0.012 15.4 0.0 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Glyco_transf_20 PF00982.21 gi|433638511|ref|YP_007284271.1| - 2.2e-109 366.3 0.0 2.6e-109 366.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Glycos_transf_1 PF00534.20 gi|433638511|ref|YP_007284271.1| - 0.029 13.9 0.0 0.37 10.3 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433638511|ref|YP_007284271.1| - 0.092 13.2 0.0 0.19 12.1 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 zf-ribbon_3 PF13248.6 gi|433638512|ref|YP_007284272.1| - 0.0016 17.8 1.7 0.22 11.0 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain CpXC PF14353.6 gi|433638512|ref|YP_007284272.1| - 0.0016 18.4 0.1 0.0018 18.3 0.1 1.1 1 0 0 1 1 1 1 CpXC protein Nudix_N_2 PF14803.6 gi|433638512|ref|YP_007284272.1| - 0.0022 17.9 2.0 1.5 8.8 0.4 2.2 2 0 0 2 2 2 2 Nudix N-terminal Zn-ribbon_8 PF09723.10 gi|433638512|ref|YP_007284272.1| - 0.013 15.6 3.1 1.4 9.1 0.3 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|433638512|ref|YP_007284272.1| - 0.016 15.3 1.0 0.044 13.8 1.0 1.7 1 1 0 1 1 1 0 Double zinc ribbon zf-LITAF-like PF10601.9 gi|433638512|ref|YP_007284272.1| - 0.019 15.2 1.0 2.6 8.4 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|433638512|ref|YP_007284272.1| - 0.022 14.5 0.8 0.26 11.1 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain IBR PF01485.21 gi|433638512|ref|YP_007284272.1| - 0.049 13.9 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zinc_ribbon_4 PF13717.6 gi|433638512|ref|YP_007284272.1| - 0.051 13.5 1.5 6.2 6.8 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|433638512|ref|YP_007284272.1| - 0.058 13.4 0.9 1.6 8.7 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain UPF0547 PF10571.9 gi|433638512|ref|YP_007284272.1| - 0.14 12.2 3.6 7.6 6.7 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_5 PF13719.6 gi|433638512|ref|YP_007284272.1| - 0.19 11.5 1.4 0.69 9.7 0.2 2.0 2 0 0 2 2 2 0 zinc-ribbon domain BAT PF15915.5 gi|433638513|ref|YP_007284273.1| - 1.2e-20 74.0 8.3 1.2e-20 74.0 8.3 5.0 4 0 0 4 4 4 1 GAF and HTH_10 associated domain HTH_10 PF04967.12 gi|433638513|ref|YP_007284273.1| - 1.9e-20 72.4 0.1 3.5e-20 71.5 0.1 1.5 1 0 0 1 1 1 1 HTH DNA binding domain PAS_4 PF08448.10 gi|433638513|ref|YP_007284273.1| - 4.9e-12 46.1 6.2 1.9e-05 24.9 0.0 4.5 4 0 0 4 4 3 3 PAS fold PAS PF00989.25 gi|433638513|ref|YP_007284273.1| - 1.3e-09 38.0 0.2 1.3e-06 28.4 0.0 3.5 3 0 0 3 3 3 1 PAS fold PAS_9 PF13426.7 gi|433638513|ref|YP_007284273.1| - 6.2e-09 36.1 0.0 9.7e-05 22.6 0.0 3.6 3 0 0 3 3 3 2 PAS domain PAS_8 PF13188.7 gi|433638513|ref|YP_007284273.1| - 5.6e-08 32.6 0.1 0.13 12.4 0.0 3.7 3 0 0 3 3 3 2 PAS domain Sigma70_r4 PF04545.16 gi|433638513|ref|YP_007284273.1| - 3.9e-06 26.3 0.1 1.3e-05 24.7 0.1 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 Imm70 PF15601.6 gi|433638513|ref|YP_007284273.1| - 0.03 13.9 0.0 0.059 12.9 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 70 Sigma70_r4_2 PF08281.12 gi|433638513|ref|YP_007284273.1| - 0.031 14.0 0.0 0.39 10.4 0.0 2.7 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_20 PF12840.7 gi|433638513|ref|YP_007284273.1| - 0.037 14.1 0.2 0.55 10.3 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_AraC PF00165.23 gi|433638513|ref|YP_007284273.1| - 0.038 14.1 0.0 0.1 12.8 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family TetR_N PF00440.23 gi|433638513|ref|YP_007284273.1| - 0.051 13.4 0.0 0.14 11.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_24 PF13412.6 gi|433638513|ref|YP_007284273.1| - 0.053 13.1 0.0 0.13 11.8 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|433638513|ref|YP_007284273.1| - 0.053 13.3 0.0 1.4 8.9 0.0 2.6 2 0 0 2 2 2 0 Homeodomain-like domain PAS_3 PF08447.12 gi|433638513|ref|YP_007284273.1| - 0.11 12.8 0.0 0.31 11.4 0.0 1.8 1 0 0 1 1 1 0 PAS fold DUF3618 PF12277.8 gi|433638513|ref|YP_007284273.1| - 0.12 12.7 2.6 0.89 9.9 0.7 3.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) HTH_10 PF04967.12 gi|433638514|ref|YP_007284274.1| - 5.9e-19 67.6 0.0 9.5e-19 67.0 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433638514|ref|YP_007284274.1| - 2e-10 40.7 1.4 2e-10 40.7 1.4 1.5 1 1 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433638514|ref|YP_007284274.1| - 2.5e-07 30.1 0.0 4.6e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|433638514|ref|YP_007284274.1| - 1.7e-05 24.8 0.0 4.1e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_24 PF13412.6 gi|433638514|ref|YP_007284274.1| - 2.7e-05 23.7 0.1 5e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433638514|ref|YP_007284274.1| - 5.5e-05 23.0 0.1 0.00021 21.1 0.0 2.1 2 0 0 2 2 2 1 MarR family Sigma70_r4_2 PF08281.12 gi|433638514|ref|YP_007284274.1| - 0.001 18.7 0.2 0.0024 17.5 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_50 PF18024.1 gi|433638514|ref|YP_007284274.1| - 0.0012 18.4 0.0 0.02 14.5 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|433638514|ref|YP_007284274.1| - 0.002 18.0 0.1 0.023 14.6 0.0 2.2 2 0 0 2 2 2 1 HTH domain Phage_CI_repr PF07022.13 gi|433638514|ref|YP_007284274.1| - 0.0021 18.1 0.1 0.026 14.6 0.0 2.3 2 0 0 2 2 2 1 Bacteriophage CI repressor helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|433638514|ref|YP_007284274.1| - 0.0032 17.3 0.1 0.0087 15.9 0.1 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain P22_Cro PF14549.6 gi|433638514|ref|YP_007284274.1| - 0.0049 16.7 0.0 0.17 11.8 0.0 2.2 2 0 0 2 2 2 1 DNA-binding transcriptional regulator Cro HTH_31 PF13560.6 gi|433638514|ref|YP_007284274.1| - 0.011 16.0 0.0 0.043 14.2 0.0 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|433638514|ref|YP_007284274.1| - 0.013 15.4 0.0 0.049 13.5 0.0 1.9 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sigma70_ECF PF07638.11 gi|433638514|ref|YP_007284274.1| - 0.015 15.2 0.2 0.041 13.8 0.0 1.8 2 1 1 3 3 3 0 ECF sigma factor HTH_23 PF13384.6 gi|433638514|ref|YP_007284274.1| - 0.022 14.6 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_5 PF01022.20 gi|433638514|ref|YP_007284274.1| - 0.034 14.0 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|433638514|ref|YP_007284274.1| - 0.035 14.0 0.0 0.073 13.0 0.0 1.5 1 0 0 1 1 1 0 MarR family KORA PF16509.5 gi|433638514|ref|YP_007284274.1| - 0.045 14.0 0.0 0.1 12.9 0.0 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_28 PF13518.6 gi|433638514|ref|YP_007284274.1| - 0.062 13.4 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_psq PF05225.16 gi|433638514|ref|YP_007284274.1| - 0.074 12.8 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 helix-turn-helix, Psq domain HTH_30 PF13556.6 gi|433638514|ref|YP_007284274.1| - 0.1 12.4 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_37 PF13744.6 gi|433638514|ref|YP_007284274.1| - 0.13 12.3 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain UPF0122 PF04297.14 gi|433638514|ref|YP_007284274.1| - 0.14 12.5 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_1 PF00126.27 gi|433638514|ref|YP_007284274.1| - 0.15 12.1 0.2 0.55 10.2 0.1 2.0 2 0 0 2 2 1 0 Bacterial regulatory helix-turn-helix protein, lysR family CBS PF00571.28 gi|433638515|ref|YP_007284275.1| - 2.9e-20 72.5 0.2 6.2e-10 39.4 0.0 2.4 2 0 0 2 2 2 2 CBS domain HTH_31 PF13560.6 gi|433638515|ref|YP_007284275.1| - 6.5e-11 42.4 1.3 1.5e-10 41.2 1.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|433638515|ref|YP_007284275.1| - 2.6e-09 37.0 0.0 5.7e-09 35.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|433638515|ref|YP_007284275.1| - 0.0001 22.2 0.0 0.00022 21.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|433638515|ref|YP_007284275.1| - 0.00013 21.8 0.1 0.00041 20.3 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|433638515|ref|YP_007284275.1| - 0.00094 19.6 0.1 0.0024 18.3 0.0 1.7 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 gi|433638515|ref|YP_007284275.1| - 0.0017 18.2 0.3 0.0063 16.4 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|433638515|ref|YP_007284275.1| - 0.095 12.2 0.3 1.1 8.8 0.1 2.6 3 0 0 3 3 3 0 Sigma-70, region 4 DUF555 PF04475.12 gi|433638516|ref|YP_007284276.1| - 1.3e-45 153.9 0.2 1.7e-45 153.4 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Proteasome PF00227.26 gi|433638518|ref|YP_007284278.1| - 6.9e-43 146.4 0.2 8.1e-43 146.1 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit GFO_IDH_MocA PF01408.22 gi|433638519|ref|YP_007284279.1| - 1.4e-25 90.5 0.3 2.3e-25 89.7 0.3 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|433638519|ref|YP_007284279.1| - 2.2e-07 30.9 0.0 4.6e-07 29.8 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain 2-Hacid_dh_C PF02826.19 gi|433638519|ref|YP_007284279.1| - 0.00036 19.9 0.0 0.00069 19.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|433638519|ref|YP_007284279.1| - 0.00052 20.7 0.5 0.0012 19.5 0.5 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain IlvN PF07991.12 gi|433638519|ref|YP_007284279.1| - 0.0033 17.0 0.2 0.0071 15.9 0.1 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain F420_oxidored PF03807.17 gi|433638519|ref|YP_007284279.1| - 0.0098 16.5 0.3 0.019 15.5 0.3 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|433638519|ref|YP_007284279.1| - 0.047 13.9 0.2 0.13 12.5 0.2 1.8 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CoA_binding PF02629.19 gi|433638519|ref|YP_007284279.1| - 0.063 14.0 0.9 0.32 11.7 0.3 2.3 2 0 0 2 2 2 0 CoA binding domain NAD_binding_2 PF03446.15 gi|433638519|ref|YP_007284279.1| - 0.17 12.0 1.0 0.47 10.6 0.1 2.3 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|433638519|ref|YP_007284279.1| - 1.2 9.0 3.8 3.7 7.4 1.0 2.4 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF389 PF04087.14 gi|433638520|ref|YP_007284280.1| - 3.7e-35 121.0 18.6 4.7e-34 117.5 16.5 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF389) DUF2919 PF11143.8 gi|433638520|ref|YP_007284280.1| - 0.054 13.8 1.4 0.15 12.4 1.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2919) IF-2B PF01008.17 gi|433638521|ref|YP_007284281.1| - 2.5e-44 151.6 0.9 2.9e-44 151.4 0.9 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family THDPS_N_2 PF14805.6 gi|433638521|ref|YP_007284281.1| - 0.14 12.4 1.8 0.28 11.5 1.0 1.9 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal ParA PF10609.9 gi|433638522|ref|YP_007284282.1| - 3.5e-99 331.2 0.0 4.1e-99 331.0 0.0 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|433638522|ref|YP_007284282.1| - 2e-15 56.9 0.0 1.3e-14 54.4 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|433638522|ref|YP_007284282.1| - 1.2e-10 41.6 0.2 4.6e-09 36.4 0.1 2.1 2 0 0 2 2 2 1 AAA domain FeS_assembly_P PF01883.19 gi|433638522|ref|YP_007284282.1| - 1.4e-09 38.0 0.4 4.8e-09 36.3 0.1 2.1 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein MipZ PF09140.11 gi|433638522|ref|YP_007284282.1| - 4.8e-08 32.6 0.0 6.8e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 ATPase MipZ VirC1 PF07015.11 gi|433638522|ref|YP_007284282.1| - 9e-06 25.1 0.0 1.6e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 VirC1 protein Fer4_NifH PF00142.18 gi|433638522|ref|YP_007284282.1| - 0.00054 19.5 0.0 0.003 17.1 0.1 1.9 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|433638522|ref|YP_007284282.1| - 0.00065 19.0 3.6 0.0013 18.0 0.6 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_25 PF13481.6 gi|433638522|ref|YP_007284282.1| - 0.0035 17.0 0.0 0.0085 15.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_26 PF13500.6 gi|433638522|ref|YP_007284282.1| - 0.012 15.5 0.0 2.3 8.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 gi|433638522|ref|YP_007284282.1| - 0.025 13.6 0.2 0.041 12.9 0.2 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|433638522|ref|YP_007284282.1| - 0.088 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF1610 PF07754.11 gi|433638522|ref|YP_007284282.1| - 0.11 12.5 0.1 1 9.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) RsgA_GTPase PF03193.16 gi|433638522|ref|YP_007284282.1| - 0.12 12.3 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase APS_kinase PF01583.20 gi|433638522|ref|YP_007284282.1| - 0.13 12.1 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|433638522|ref|YP_007284282.1| - 0.44 10.0 1.4 2.1 7.8 0.4 2.0 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ UDG PF03167.19 gi|433638524|ref|YP_007284284.1| - 7.6e-20 71.5 0.0 8.5e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Phage_holin_3_6 PF07332.11 gi|433638525|ref|YP_007284285.1| - 0.046 13.8 5.8 0.051 13.6 5.8 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III HpcH_HpaI PF03328.14 gi|433638528|ref|YP_007284288.1| - 1.8e-15 56.7 0.0 4.9e-15 55.3 0.0 1.7 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|433638528|ref|YP_007284288.1| - 0.00059 19.1 0.0 0.08 12.1 0.0 2.1 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold MaoC_dehydratas PF01575.19 gi|433638529|ref|YP_007284289.1| - 3.5e-06 26.6 0.0 0.0025 17.3 0.0 2.3 2 0 0 2 2 2 2 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|433638529|ref|YP_007284289.1| - 0.0043 17.2 0.0 0.018 15.2 0.0 2.0 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT_2 PF13279.6 gi|433638529|ref|YP_007284289.1| - 0.11 13.0 0.0 0.82 10.2 0.0 2.1 2 0 0 2 2 2 0 Thioesterase-like superfamily MAAL_C PF07476.11 gi|433638530|ref|YP_007284290.1| - 2.2e-108 361.1 0.0 3.1e-108 360.6 0.0 1.2 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus MAAL_N PF05034.13 gi|433638530|ref|YP_007284290.1| - 5e-70 234.2 0.9 8.4e-70 233.5 0.9 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase N-terminus MR_MLE_C PF13378.6 gi|433638530|ref|YP_007284290.1| - 8.7e-13 48.3 0.1 1.4e-12 47.7 0.1 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like Met_asp_mut_E PF06368.11 gi|433638531|ref|YP_007284291.1| - 3.7e-208 691.4 0.0 4.2e-208 691.2 0.0 1.0 1 0 0 1 1 1 1 Methylaspartate mutase E chain (MutE) B12-binding PF02310.19 gi|433638532|ref|YP_007284292.1| - 8.6e-18 64.5 1.1 1e-17 64.3 1.1 1.1 1 0 0 1 1 1 1 B12 binding domain Peripla_BP_6 PF13458.6 gi|433638532|ref|YP_007284292.1| - 0.00028 20.6 0.7 0.00068 19.4 0.7 1.6 1 1 0 1 1 1 1 Periplasmic binding protein UPF0180 PF03698.13 gi|433638532|ref|YP_007284292.1| - 0.058 13.6 0.0 0.14 12.4 0.0 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0180) Gly_reductase PF09338.11 gi|433638532|ref|YP_007284292.1| - 0.11 10.9 0.1 0.13 10.6 0.1 1.1 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase component B subunits CoA_transf_3 PF02515.17 gi|433638533|ref|YP_007284293.1| - 1e-119 399.9 0.0 1.2e-119 399.8 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III GCH_III PF05165.12 gi|433638535|ref|YP_007284295.1| - 2e-90 302.4 0.5 2.5e-90 302.1 0.5 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase III GGDEF_2 PF17853.1 gi|433638535|ref|YP_007284295.1| - 4.1e-07 30.3 0.1 0.00016 21.9 0.0 2.2 2 0 0 2 2 2 2 GGDEF-like domain CBS PF00571.28 gi|433638536|ref|YP_007284296.1| - 9.6e-20 70.8 5.9 7.5e-13 48.7 0.8 2.2 2 0 0 2 2 2 2 CBS domain TF_Zn_Ribbon PF08271.12 gi|433638536|ref|YP_007284296.1| - 0.39 10.3 3.6 2.5 7.7 3.8 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding PGK PF00162.19 gi|433638537|ref|YP_007284297.1| - 1.6e-104 349.9 0.0 1.8e-104 349.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Acetyltransf_1 PF00583.25 gi|433638538|ref|YP_007284298.1| - 6.8e-18 65.0 0.0 8.4e-18 64.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433638538|ref|YP_007284298.1| - 2.8e-12 46.9 0.0 5.6e-12 45.9 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433638538|ref|YP_007284298.1| - 1.9e-11 44.0 0.0 2.7e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433638538|ref|YP_007284298.1| - 4.2e-06 26.6 0.0 6.4e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_13 PF13880.6 gi|433638538|ref|YP_007284298.1| - 6.2e-05 22.9 0.0 0.00019 21.3 0.0 1.7 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_9 PF13527.7 gi|433638538|ref|YP_007284298.1| - 7.6e-05 22.8 0.0 0.00011 22.2 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433638538|ref|YP_007284298.1| - 0.0029 17.7 0.0 0.0065 16.6 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|433638538|ref|YP_007284298.1| - 0.021 15.5 0.0 0.028 15.1 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HalOD1 PF18545.1 gi|433638539|ref|YP_007284299.1| - 1.1e-22 80.0 0.4 1.3e-22 79.8 0.4 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 RNase_H_2 PF13482.6 gi|433638540|ref|YP_007284300.1| - 1.7e-33 115.9 0.0 2.3e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|433638540|ref|YP_007284300.1| - 0.0033 17.1 0.0 0.035 13.8 0.0 2.1 1 1 1 2 2 2 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_A_exo1 PF01612.20 gi|433638540|ref|YP_007284300.1| - 0.1 12.3 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 3'-5' exonuclease Sigma54_activ_2 PF14532.6 gi|433638542|ref|YP_007284302.1| - 0.22 11.7 0.0 0.44 10.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain CorA PF01544.18 gi|433638543|ref|YP_007284303.1| - 0.36 10.1 3.3 1.4 8.2 3.3 1.8 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein OB_aCoA_assoc PF01796.17 gi|433638544|ref|YP_007284304.1| - 6.4e-06 26.1 0.7 1e-05 25.5 0.7 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated Thiolase_N PF00108.23 gi|433638545|ref|YP_007284305.1| - 1.2e-55 188.6 0.0 1.8e-55 188.1 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|433638545|ref|YP_007284305.1| - 1.5e-08 34.4 0.1 3.2e-08 33.2 0.1 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain Ketoacyl-synt_C PF02801.22 gi|433638545|ref|YP_007284305.1| - 0.0062 16.6 0.1 8.4 6.4 0.0 3.2 3 0 0 3 3 3 2 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 gi|433638545|ref|YP_007284305.1| - 0.026 14.1 5.2 0.05 13.2 1.1 2.7 2 1 2 4 4 4 0 Beta-ketoacyl synthase, N-terminal domain Lactamase_B PF00753.27 gi|433638546|ref|YP_007284306.1| - 5.9e-27 95.0 8.9 1.3e-26 93.9 8.9 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433638546|ref|YP_007284306.1| - 1.2e-09 38.0 9.5 3.4e-09 36.5 5.6 2.6 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433638546|ref|YP_007284306.1| - 3.9e-06 26.9 0.0 1.8e-05 24.7 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|433638546|ref|YP_007284306.1| - 0.002 17.6 0.0 0.0035 16.8 0.0 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily domain PMSR PF01625.21 gi|433638547|ref|YP_007284307.1| - 4.6e-65 218.5 1.6 5.4e-65 218.2 1.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Cyclase PF04199.13 gi|433638548|ref|YP_007284308.1| - 1.3e-28 100.0 2.2 1.6e-28 99.7 2.2 1.1 1 0 0 1 1 1 1 Putative cyclase AzlD PF05437.12 gi|433638549|ref|YP_007284309.1| - 4.6e-16 58.8 8.6 5.2e-16 58.6 8.6 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) AzlC PF03591.14 gi|433638550|ref|YP_007284310.1| - 4.2e-35 121.2 15.4 4.2e-35 121.2 15.4 2.0 2 0 0 2 2 2 1 AzlC protein HD PF01966.22 gi|433638551|ref|YP_007284311.1| - 3.1e-13 50.0 0.5 6.7e-13 48.9 0.5 1.5 1 0 0 1 1 1 1 HD domain DUF4202 PF13875.6 gi|433638551|ref|YP_007284311.1| - 0.028 14.3 0.2 0.091 12.7 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4202) Sigma70_r2 PF04542.14 gi|433638551|ref|YP_007284311.1| - 0.12 12.1 1.5 7.2 6.5 0.2 2.5 2 0 0 2 2 2 0 Sigma-70 region 2 RibD_C PF01872.17 gi|433638552|ref|YP_007284312.1| - 6.7e-52 176.2 0.3 7.5e-52 176.1 0.3 1.0 1 0 0 1 1 1 1 RibD C-terminal domain tRNA_anti-codon PF01336.25 gi|433638553|ref|YP_007284313.1| - 3e-07 30.3 2.4 0.25 11.4 0.1 4.4 4 1 0 4 4 4 3 OB-fold nucleic acid binding domain TRAF6_Z2 PF18048.1 gi|433638553|ref|YP_007284313.1| - 0.79 9.9 2.4 1.4 9.1 2.4 1.3 1 0 0 1 1 1 0 TNF receptor-associated factor 6 zinc finger 2 Metallophos_2 PF12850.7 gi|433638555|ref|YP_007284315.1| - 8.9e-08 32.5 0.0 1.3e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433638555|ref|YP_007284315.1| - 5.3e-07 30.3 0.2 6.1e-06 26.9 0.0 2.1 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase DEAD_assoc PF08494.11 gi|433638556|ref|YP_007284316.1| - 1.6e-31 109.6 0.3 4.4e-31 108.2 0.0 1.9 2 0 0 2 2 2 1 DEAD/H associated DEAD PF00270.29 gi|433638556|ref|YP_007284316.1| - 1.5e-28 99.7 0.0 3.8e-28 98.4 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|433638556|ref|YP_007284316.1| - 2.7e-22 79.2 0.0 4.3e-21 75.3 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|433638556|ref|YP_007284316.1| - 8.4e-09 35.7 0.0 1.8e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|433638556|ref|YP_007284316.1| - 0.014 14.2 0.0 0.038 12.7 0.0 1.7 2 0 0 2 2 2 0 SNF2 family N-terminal domain AAA_19 PF13245.6 gi|433638556|ref|YP_007284316.1| - 0.047 14.0 0.3 3.6 7.9 0.3 3.4 2 2 0 2 2 2 0 AAA domain FliG_N PF14842.6 gi|433638556|ref|YP_007284316.1| - 0.07 13.7 0.3 16 6.1 0.1 3.8 3 0 0 3 3 3 0 FliG N-terminal domain AAA_22 PF13401.6 gi|433638556|ref|YP_007284316.1| - 0.093 13.0 0.5 36 4.6 0.0 3.4 4 0 0 4 4 4 0 AAA domain Zn-ribbon_8 PF09723.10 gi|433638556|ref|YP_007284316.1| - 0.2 11.8 0.5 0.45 10.7 0.5 1.6 1 0 0 1 1 1 0 Zinc ribbon domain PS_Dcarbxylase PF02666.15 gi|433638557|ref|YP_007284317.1| - 3.1e-24 85.7 0.1 2.6e-21 76.1 0.0 2.0 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase Peptidase_M23 PF01551.22 gi|433638557|ref|YP_007284317.1| - 0.094 12.9 0.6 1.5e+02 2.6 0.0 3.7 2 2 2 4 4 4 0 Peptidase family M23 AAA PF00004.29 gi|433638558|ref|YP_007284318.1| - 1.1e-96 320.3 0.0 4.7e-47 159.7 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|433638558|ref|YP_007284318.1| - 3.7e-23 81.1 4.5 8.1e-11 41.5 0.2 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|433638558|ref|YP_007284318.1| - 2.6e-21 75.6 1.2 1.5e-20 73.2 0.4 2.7 3 0 0 3 3 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|433638558|ref|YP_007284318.1| - 1.1e-15 57.7 0.0 3.1e-06 27.0 0.0 3.4 4 0 0 4 4 4 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|433638558|ref|YP_007284318.1| - 1.4e-15 58.1 0.4 0.00032 21.1 0.0 4.5 2 2 1 4 4 4 2 AAA ATPase domain AAA_2 PF07724.14 gi|433638558|ref|YP_007284318.1| - 1.4e-13 51.4 0.0 9.3e-06 25.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|433638558|ref|YP_007284318.1| - 1.1e-12 48.1 2.3 0.00077 19.5 0.2 5.1 3 2 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|433638558|ref|YP_007284318.1| - 2.4e-11 44.1 1.0 0.0055 17.0 0.0 4.2 2 2 1 3 3 3 2 AAA domain AAA_33 PF13671.6 gi|433638558|ref|YP_007284318.1| - 2.8e-11 43.8 0.0 2.3e-05 24.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|433638558|ref|YP_007284318.1| - 3.5e-10 40.0 0.0 0.0002 21.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|433638558|ref|YP_007284318.1| - 4.2e-10 39.4 0.0 0.00026 20.3 0.0 2.8 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_18 PF13238.6 gi|433638558|ref|YP_007284318.1| - 8.7e-08 32.8 0.0 0.009 16.6 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_28 PF13521.6 gi|433638558|ref|YP_007284318.1| - 9.6e-08 32.4 0.0 0.0066 16.7 0.0 2.9 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|433638558|ref|YP_007284318.1| - 2.2e-07 30.8 0.0 0.0086 15.8 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|433638558|ref|YP_007284318.1| - 8.1e-07 28.6 0.2 0.033 13.6 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|433638558|ref|YP_007284318.1| - 9.3e-07 28.8 0.0 0.018 14.8 0.0 2.6 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|433638558|ref|YP_007284318.1| - 9.9e-07 29.1 0.0 0.023 15.1 0.0 2.4 2 0 0 2 2 2 2 RNA helicase ABC_tran PF00005.27 gi|433638558|ref|YP_007284318.1| - 2.3e-06 28.2 0.0 0.013 16.0 0.0 2.5 2 0 0 2 2 2 2 ABC transporter TsaE PF02367.17 gi|433638558|ref|YP_007284318.1| - 3.4e-06 27.1 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|433638558|ref|YP_007284318.1| - 5.5e-06 26.2 0.0 0.2 11.3 0.0 3.1 2 2 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|433638558|ref|YP_007284318.1| - 7.8e-06 25.3 0.0 0.04 13.2 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin CDC48_2 PF02933.17 gi|433638558|ref|YP_007284318.1| - 1e-05 25.2 2.0 1.3e-05 24.9 0.5 2.0 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_3 PF07726.11 gi|433638558|ref|YP_007284318.1| - 1e-05 25.4 0.0 0.2 11.5 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|433638558|ref|YP_007284318.1| - 2.2e-05 24.1 0.0 0.072 12.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region DUF815 PF05673.13 gi|433638558|ref|YP_007284318.1| - 2.5e-05 23.5 0.0 0.075 12.2 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Parvo_NS1 PF01057.17 gi|433638558|ref|YP_007284318.1| - 3.1e-05 23.2 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 gi|433638558|ref|YP_007284318.1| - 7.3e-05 22.4 11.2 0.55 9.8 0.1 4.8 3 2 2 5 5 4 2 AAA domain AAA_11 PF13086.6 gi|433638558|ref|YP_007284318.1| - 7.9e-05 22.6 0.0 0.71 9.6 0.0 2.8 3 0 0 3 3 3 2 AAA domain DUF2075 PF09848.9 gi|433638558|ref|YP_007284318.1| - 0.00011 21.6 0.0 0.2 10.9 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|433638558|ref|YP_007284318.1| - 0.00016 21.5 0.3 1.1 8.9 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_17 PF13207.6 gi|433638558|ref|YP_007284318.1| - 0.00021 21.8 0.0 0.25 11.8 0.0 2.9 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|433638558|ref|YP_007284318.1| - 0.00021 20.6 0.0 0.93 8.6 0.0 2.7 3 0 0 3 3 3 2 NB-ARC domain PhoH PF02562.16 gi|433638558|ref|YP_007284318.1| - 0.00022 20.7 0.1 0.8 9.1 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein Sigma54_activ_2 PF14532.6 gi|433638558|ref|YP_007284318.1| - 0.00023 21.3 0.0 0.92 9.6 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain ATPase PF06745.13 gi|433638558|ref|YP_007284318.1| - 0.00025 20.5 0.3 1.6 8.0 0.0 3.4 2 2 0 3 3 3 2 KaiC ATPase_2 PF01637.18 gi|433638558|ref|YP_007284318.1| - 0.00028 20.9 0.0 2.4 8.0 0.0 3.6 2 2 2 4 4 4 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|433638558|ref|YP_007284318.1| - 0.00068 20.0 0.0 0.74 10.1 0.0 2.9 3 0 0 3 3 2 1 AAA domain TniB PF05621.11 gi|433638558|ref|YP_007284318.1| - 0.00073 19.0 0.0 15 4.9 0.0 4.0 4 0 0 4 4 4 0 Bacterial TniB protein NACHT PF05729.12 gi|433638558|ref|YP_007284318.1| - 0.00094 19.1 0.2 1.8 8.5 0.0 3.2 3 0 0 3 3 3 1 NACHT domain SKI PF01202.22 gi|433638558|ref|YP_007284318.1| - 0.0049 17.0 0.0 3.2 7.9 0.0 2.5 2 0 0 2 2 2 1 Shikimate kinase NTPase_1 PF03266.15 gi|433638558|ref|YP_007284318.1| - 0.0051 16.7 0.1 5 7.0 0.0 3.4 2 1 1 3 3 3 0 NTPase Cytidylate_kin PF02224.18 gi|433638558|ref|YP_007284318.1| - 0.0055 16.5 0.0 1.6 8.4 0.0 2.7 2 0 0 2 2 2 1 Cytidylate kinase Cytidylate_kin2 PF13189.6 gi|433638558|ref|YP_007284318.1| - 0.0072 16.5 0.0 0.26 11.4 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family MazE_antitoxin PF04014.18 gi|433638558|ref|YP_007284318.1| - 0.011 15.6 0.0 5 7.2 0.1 2.6 2 0 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin AFG1_ATPase PF03969.16 gi|433638558|ref|YP_007284318.1| - 0.024 13.6 0.0 1.8 7.4 0.0 2.2 2 0 0 2 2 2 0 AFG1-like ATPase CPT PF07931.12 gi|433638558|ref|YP_007284318.1| - 0.03 14.1 0.0 9.3 6.1 0.0 3.2 3 0 0 3 3 3 0 Chloramphenicol phosphotransferase-like protein IPT PF01745.16 gi|433638558|ref|YP_007284318.1| - 0.056 12.8 0.0 6.3 6.1 0.0 2.3 2 0 0 2 2 2 0 Isopentenyl transferase Bac_DnaA PF00308.18 gi|433638558|ref|YP_007284318.1| - 0.065 13.1 0.0 16 5.2 0.0 2.4 2 0 0 2 2 2 0 Bacterial dnaA protein SRPRB PF09439.10 gi|433638558|ref|YP_007284318.1| - 0.09 12.2 0.0 13 5.2 0.0 2.6 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit Rad17 PF03215.15 gi|433638558|ref|YP_007284318.1| - 0.24 11.3 0.0 27 4.6 0.0 2.5 2 1 0 2 2 2 0 Rad17 P-loop domain zf-C2H2_3 PF13878.6 gi|433638559|ref|YP_007284319.1| - 0.052 13.4 2.8 0.095 12.5 2.8 1.5 1 1 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO GHMP_kinases_N PF00288.26 gi|433638561|ref|YP_007284321.1| - 7.2e-11 42.2 3.0 1.8e-10 40.9 3.0 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|433638561|ref|YP_007284321.1| - 0.0035 17.7 0.1 0.014 15.7 0.0 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal CM_2 PF01817.21 gi|433638562|ref|YP_007284322.1| - 5.4e-15 55.5 2.7 6.4e-15 55.3 2.7 1.1 1 0 0 1 1 1 1 Chorismate mutase type II PemK_toxin PF02452.17 gi|433638563|ref|YP_007284323.1| - 8.4e-28 97.0 0.1 9.3e-28 96.8 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF5444 PF17519.2 gi|433638564|ref|YP_007284324.1| - 0.042 13.9 0.7 0.067 13.2 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5444) MatE PF01554.18 gi|433638565|ref|YP_007284325.1| - 1.6e-47 161.2 22.5 1.7e-28 99.3 10.1 2.5 2 0 0 2 2 2 2 MatE MurJ PF03023.14 gi|433638565|ref|YP_007284325.1| - 3e-13 49.2 9.6 4.2e-12 45.4 3.8 2.2 2 0 0 2 2 2 2 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 gi|433638565|ref|YP_007284325.1| - 3.3e-09 37.0 7.8 3.3e-09 37.0 7.8 3.8 4 0 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Phage_int_SAM_5 PF13102.6 gi|433638566|ref|YP_007284326.1| - 1.6e-06 28.4 0.0 8.2e-06 26.1 0.0 1.9 2 0 0 2 2 2 1 Phage integrase SAM-like domain Phage_int_SAM_4 PF13495.6 gi|433638566|ref|YP_007284326.1| - 0.00042 20.7 0.1 0.00086 19.7 0.1 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|433638566|ref|YP_007284326.1| - 0.00057 20.1 1.0 0.0016 18.7 1.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_integrase PF00589.22 gi|433638566|ref|YP_007284326.1| - 0.047 13.5 0.0 0.21 11.4 0.0 2.2 1 1 0 1 1 1 0 Phage integrase family DUF354 PF04007.12 gi|433638567|ref|YP_007284327.1| - 4.6e-10 39.1 0.0 5.5e-06 25.7 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|433638567|ref|YP_007284327.1| - 0.0077 16.3 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|433638567|ref|YP_007284327.1| - 0.011 15.7 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_2 PF00535.26 gi|433638568|ref|YP_007284328.1| - 2e-17 63.5 0.0 2.2e-08 34.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 TMEM51 PF15345.6 gi|433638568|ref|YP_007284328.1| - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein 51 Proton_antipo_M PF00361.20 gi|433638569|ref|YP_007284329.1| - 7.9e-40 136.9 17.7 1.5e-39 136.0 17.7 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 gi|433638570|ref|YP_007284330.1| - 1.8e-65 221.1 18.7 2.6e-65 220.5 18.7 1.2 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|433638570|ref|YP_007284330.1| - 7.5e-07 29.1 0.3 3.3e-06 27.1 0.1 2.3 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|433638571|ref|YP_007284331.1| - 3.1e-62 210.4 21.2 5.6e-62 209.6 21.2 1.4 1 0 0 1 1 1 1 Proton-conducting membrane transporter Serinc PF03348.15 gi|433638571|ref|YP_007284331.1| - 0.0059 15.6 0.9 0.015 14.2 0.9 1.6 1 0 0 1 1 1 1 Serine incorporator (Serinc) Oxidored_q2 PF00420.24 gi|433638572|ref|YP_007284332.1| - 1.4e-25 89.0 1.7 1.6e-25 88.7 1.7 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CD47 PF04549.14 gi|433638572|ref|YP_007284332.1| - 0.016 15.4 1.4 0.016 15.4 1.4 1.6 2 0 0 2 2 2 0 CD47 transmembrane region LtrA PF06772.11 gi|433638572|ref|YP_007284332.1| - 0.19 10.9 4.5 0.23 10.6 4.5 1.0 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) Mntp PF02659.15 gi|433638572|ref|YP_007284332.1| - 0.46 10.2 5.1 6.7 6.5 5.1 2.2 1 1 0 1 1 1 0 Putative manganese efflux pump MnhB PF04039.13 gi|433638573|ref|YP_007284333.1| - 7.4e-21 74.7 12.1 7.4e-21 74.7 12.1 1.3 1 1 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF4040 PF13244.6 gi|433638574|ref|YP_007284334.1| - 8.7e-19 67.4 13.7 8.7e-19 67.4 13.7 2.3 4 0 0 4 4 4 1 Domain of unknown function (DUF4040) Oxidored_q3 PF00499.20 gi|433638574|ref|YP_007284334.1| - 0.00023 20.9 8.8 0.00037 20.2 8.8 1.4 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PhaG_MnhG_YufB PF03334.14 gi|433638575|ref|YP_007284335.1| - 1.5e-25 89.3 9.7 1.7e-25 89.0 9.7 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit PRA1 PF03208.19 gi|433638575|ref|YP_007284335.1| - 0.46 10.1 3.9 0.61 9.7 3.9 1.1 1 0 0 1 1 1 0 PRA1 family protein MrpF_PhaF PF04066.13 gi|433638576|ref|YP_007284336.1| - 2e-18 66.5 6.5 2e-18 66.5 6.5 2.2 2 1 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) MNHE PF01899.16 gi|433638577|ref|YP_007284337.1| - 5.3e-29 100.9 0.8 9.2e-29 100.1 0.8 1.4 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit Usp PF00582.26 gi|433638577|ref|YP_007284337.1| - 0.0019 18.7 0.6 0.0038 17.7 0.6 1.5 1 1 0 1 1 1 1 Universal stress protein family DHO_dh PF01180.21 gi|433638578|ref|YP_007284338.1| - 1.2e-81 274.1 0.0 1.4e-81 273.9 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 gi|433638578|ref|YP_007284338.1| - 7.6e-06 25.5 0.1 0.00033 20.1 0.0 2.1 2 0 0 2 2 2 2 Nitronate monooxygenase Amidohydro_1 PF01979.20 gi|433638579|ref|YP_007284339.1| - 1.6e-21 77.1 0.1 2.4e-21 76.4 0.1 1.3 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|433638579|ref|YP_007284339.1| - 7.4e-14 52.1 5.0 4.8e-09 36.2 2.0 3.1 2 1 0 2 2 2 2 Amidohydrolase family HTH_IclR PF09339.10 gi|433638581|ref|YP_007284341.1| - 0.00018 21.2 0.0 0.00034 20.4 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|433638581|ref|YP_007284341.1| - 0.00036 20.0 0.0 0.00062 19.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433638581|ref|YP_007284341.1| - 0.00053 19.8 0.1 0.0013 18.5 0.0 1.7 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|433638581|ref|YP_007284341.1| - 0.023 14.6 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 MarR family DprA_WH PF17782.1 gi|433638581|ref|YP_007284341.1| - 0.039 14.1 2.1 1.2 9.3 0.1 2.3 2 0 0 2 2 2 0 DprA winged helix domain HTH_53 PF18606.1 gi|433638581|ref|YP_007284341.1| - 0.089 12.5 0.0 0.96 9.2 0.0 2.1 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain HTH_20 PF12840.7 gi|433638582|ref|YP_007284342.1| - 0.0093 16.0 0.0 0.037 14.1 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433638582|ref|YP_007284342.1| - 0.11 12.1 0.0 1 9.0 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433638582|ref|YP_007284342.1| - 0.13 12.1 0.0 1.7 8.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family zf-DNL PF05180.12 gi|433638583|ref|YP_007284343.1| - 0.02 14.8 1.2 0.027 14.4 1.2 1.1 1 0 0 1 1 1 0 DNL zinc finger HypA PF01155.19 gi|433638583|ref|YP_007284343.1| - 0.021 14.9 0.3 0.023 14.7 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3268 PF11672.8 gi|433638583|ref|YP_007284343.1| - 0.025 14.9 0.6 0.03 14.7 0.6 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain DZR PF12773.7 gi|433638583|ref|YP_007284343.1| - 0.03 14.3 1.2 0.042 13.9 1.2 1.3 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433638583|ref|YP_007284343.1| - 0.043 13.9 2.3 0.1 12.7 2.3 1.7 1 1 1 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.8 gi|433638583|ref|YP_007284343.1| - 0.064 13.2 5.8 0.095 12.6 0.6 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) HTH_20 PF12840.7 gi|433638584|ref|YP_007284344.1| - 1.3e-07 31.5 0.0 2.3e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|433638584|ref|YP_007284344.1| - 2.1e-05 24.4 0.1 3.7e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|433638584|ref|YP_007284344.1| - 2.8e-05 23.9 0.0 4.5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|433638584|ref|YP_007284344.1| - 5.3e-05 23.0 0.0 0.0001 22.1 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433638584|ref|YP_007284344.1| - 0.00024 20.9 0.0 0.00041 20.2 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|433638584|ref|YP_007284344.1| - 0.00027 21.4 0.0 0.0004 20.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|433638584|ref|YP_007284344.1| - 0.00084 18.9 0.0 0.0014 18.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|433638584|ref|YP_007284344.1| - 0.0027 17.5 0.2 0.0049 16.6 0.0 1.5 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|433638584|ref|YP_007284344.1| - 0.015 15.2 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|433638584|ref|YP_007284344.1| - 0.021 14.7 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_Tnp_ISL3 PF13542.6 gi|433638584|ref|YP_007284344.1| - 0.033 13.6 0.0 0.36 10.3 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_7 PF02796.15 gi|433638584|ref|YP_007284344.1| - 0.037 14.1 0.0 0.067 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_29 PF13551.6 gi|433638584|ref|YP_007284344.1| - 0.098 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix DUF1616 PF07760.11 gi|433638585|ref|YP_007284345.1| - 2.1e-57 194.8 0.8 2.6e-57 194.4 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF202 PF02656.15 gi|433638585|ref|YP_007284345.1| - 3.9 8.0 8.6 1.8 9.1 2.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Hexapep PF00132.24 gi|433638587|ref|YP_007284347.1| - 1.2e-27 94.6 15.7 6e-10 38.4 1.2 5.1 4 1 1 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433638587|ref|YP_007284347.1| - 6.6e-21 73.8 12.5 1.3e-08 34.4 2.0 5.1 4 1 1 5 5 5 5 Hexapeptide repeat of succinyl-transferase DegT_DnrJ_EryC1 PF01041.17 gi|433638588|ref|YP_007284348.1| - 5.5e-118 394.4 0.0 6.2e-118 394.2 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|433638588|ref|YP_007284348.1| - 4.6e-06 26.1 0.0 7e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|433638588|ref|YP_007284348.1| - 6.5e-05 22.3 0.0 9.6e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|433638588|ref|YP_007284348.1| - 0.017 14.1 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V GFO_IDH_MocA PF01408.22 gi|433638589|ref|YP_007284349.1| - 7e-22 78.5 0.0 1.2e-21 77.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_2 PF03446.15 gi|433638589|ref|YP_007284349.1| - 3.9e-05 23.9 0.3 0.00035 20.8 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|433638589|ref|YP_007284349.1| - 9.7e-05 21.8 0.0 0.00032 20.1 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|433638589|ref|YP_007284349.1| - 0.0064 17.1 0.0 0.014 16.0 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA_C PF02894.17 gi|433638589|ref|YP_007284349.1| - 0.058 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain IlvN PF07991.12 gi|433638589|ref|YP_007284349.1| - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_N PF03721.14 gi|433638590|ref|YP_007284350.1| - 3.4e-42 144.1 0.0 2.8e-41 141.1 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|433638590|ref|YP_007284350.1| - 1.1e-19 70.4 0.0 1.7e-19 69.8 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|433638590|ref|YP_007284350.1| - 3.1e-16 59.7 0.0 7.4e-16 58.5 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|433638590|ref|YP_007284350.1| - 5.8e-08 33.1 0.0 1.5e-07 31.7 0.0 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|433638590|ref|YP_007284350.1| - 0.00039 20.4 0.1 0.00071 19.5 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433638590|ref|YP_007284350.1| - 0.0065 15.8 0.0 0.081 12.3 0.0 2.3 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CbiA PF01656.23 gi|433638590|ref|YP_007284350.1| - 0.043 13.9 0.0 0.19 11.8 0.0 2.0 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain NAD_Gly3P_dh_N PF01210.23 gi|433638590|ref|YP_007284350.1| - 0.11 12.5 0.0 0.27 11.2 0.0 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 gi|433638590|ref|YP_007284350.1| - 0.13 12.5 0.8 1.1 9.6 0.0 2.8 3 0 0 3 3 3 0 TrkA-N domain DZR PF12773.7 gi|433638591|ref|YP_007284351.1| - 0.0029 17.6 0.6 0.004 17.1 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|433638591|ref|YP_007284351.1| - 0.0031 18.2 0.2 0.0039 17.9 0.2 1.1 1 0 0 1 1 1 1 zinc-ribbon family HypA PF01155.19 gi|433638591|ref|YP_007284351.1| - 0.0058 16.6 1.3 0.0082 16.1 1.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|433638591|ref|YP_007284351.1| - 0.012 15.4 1.2 0.017 14.8 1.2 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|433638591|ref|YP_007284351.1| - 0.024 14.3 2.1 0.039 13.7 2.1 1.3 1 0 0 1 1 1 0 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 gi|433638591|ref|YP_007284351.1| - 0.093 12.2 1.3 0.2 11.1 1.3 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zinc-ribbon_6 PF10005.9 gi|433638591|ref|YP_007284351.1| - 0.12 13.1 0.4 0.16 12.7 0.4 1.2 1 0 0 1 1 1 0 zinc-ribbon domain DUF2757 PF10955.8 gi|433638591|ref|YP_007284351.1| - 0.52 10.6 1.4 0.91 9.8 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2757) Zn-ribbon_8 PF09723.10 gi|433638591|ref|YP_007284351.1| - 1 9.5 5.9 4.4 7.5 5.9 1.9 1 1 0 1 1 1 0 Zinc ribbon domain Glyco_trans_1_4 PF13692.6 gi|433638592|ref|YP_007284352.1| - 2.3e-11 44.3 0.0 4.6e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|433638592|ref|YP_007284352.1| - 9.3e-10 38.3 0.0 1.4e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433638592|ref|YP_007284352.1| - 1.3e-08 35.5 1.3 1.3e-08 35.5 1.3 2.4 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|433638592|ref|YP_007284352.1| - 1.3e-08 35.0 0.4 2.6e-08 34.1 0.1 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|433638592|ref|YP_007284352.1| - 1.2e-05 25.3 0.0 0.00016 21.7 0.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase 4-like Mito_fiss_Elm1 PF06258.11 gi|433638592|ref|YP_007284352.1| - 0.098 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial fission ELM1 DRTGG PF07085.12 gi|433638592|ref|YP_007284352.1| - 0.12 12.2 0.0 0.34 10.7 0.0 1.7 2 0 0 2 2 2 0 DRTGG domain Glyco_trans_1_2 PF13524.6 gi|433638592|ref|YP_007284352.1| - 0.15 12.4 0.0 0.51 10.8 0.0 1.9 1 1 0 1 1 1 0 Glycosyl transferases group 1 Polysacc_deac_1 PF01522.21 gi|433638593|ref|YP_007284353.1| - 3.9e-08 33.2 0.0 6.8e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Phosphodiest PF01663.22 gi|433638594|ref|YP_007284354.1| - 2e-48 165.8 0.0 7.7e-47 160.6 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase BLF1 PF17752.1 gi|433638594|ref|YP_007284354.1| - 0.026 13.8 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 Burkholderia lethal factor 1 PRA1 PF03208.19 gi|433638596|ref|YP_007284356.1| - 0.028 14.0 0.3 0.028 14.0 0.3 4.5 4 2 0 4 4 4 0 PRA1 family protein Myco_19_kDa PF05481.12 gi|433638597|ref|YP_007284357.1| - 0.11 12.7 3.2 0.91 9.8 0.4 2.6 2 1 0 2 2 2 0 Mycobacterium 19 kDa lipoprotein antigen Polysacc_synt PF01943.17 gi|433638599|ref|YP_007284359.1| - 8.7e-27 94.2 11.3 8.7e-27 94.2 11.3 2.3 1 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|433638599|ref|YP_007284359.1| - 5.7e-26 91.4 4.7 5.7e-26 91.4 4.7 2.4 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433638599|ref|YP_007284359.1| - 2.8e-20 72.8 18.3 2.8e-20 72.8 18.3 3.9 2 1 1 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|433638599|ref|YP_007284359.1| - 9.2e-08 31.9 3.3 9.2e-08 31.9 3.3 3.8 3 1 1 4 4 4 1 MatE MurJ PF03023.14 gi|433638599|ref|YP_007284359.1| - 3.2e-07 29.3 19.5 3.2e-07 29.3 19.5 2.1 1 1 1 2 2 2 1 Lipid II flippase MurJ DUF4234 PF14018.6 gi|433638599|ref|YP_007284359.1| - 0.23 11.6 3.5 1.5 9.0 0.4 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) Glycos_transf_1 PF00534.20 gi|433638600|ref|YP_007284360.1| - 4.2e-33 114.3 0.0 6.4e-33 113.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433638600|ref|YP_007284360.1| - 8.8e-33 113.6 0.1 1.6e-32 112.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|433638600|ref|YP_007284360.1| - 8.3e-16 58.2 0.0 1.8e-15 57.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|433638600|ref|YP_007284360.1| - 3.3e-12 46.7 0.4 1.5e-11 44.6 0.2 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Myco_19_kDa PF05481.12 gi|433638601|ref|YP_007284361.1| - 0.25 11.6 2.0 8.9 6.6 0.1 3.3 3 0 0 3 3 3 0 Mycobacterium 19 kDa lipoprotein antigen HTH_20 PF12840.7 gi|433638602|ref|YP_007284362.1| - 0.00064 19.7 0.0 0.0055 16.7 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain 7TMR-DISM_7TM PF07695.11 gi|433638602|ref|YP_007284362.1| - 0.011 15.6 0.2 0.015 15.2 0.2 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling Thymopoietin PF08198.11 gi|433638602|ref|YP_007284362.1| - 0.024 14.2 0.1 0.054 13.1 0.1 1.5 1 0 0 1 1 1 0 Thymopoietin protein DUF2157 PF09925.9 gi|433638602|ref|YP_007284362.1| - 0.025 14.4 0.2 0.28 11.0 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF3040 PF11239.8 gi|433638602|ref|YP_007284362.1| - 0.054 13.8 0.9 0.12 12.7 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF1495 PF07381.11 gi|433638602|ref|YP_007284362.1| - 0.068 13.0 0.1 0.84 9.5 0.0 2.3 1 1 1 2 2 2 0 Winged helix DNA-binding domain (DUF1495) DUF4191 PF13829.6 gi|433638602|ref|YP_007284362.1| - 0.22 10.8 1.0 0.29 10.4 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) TFIIB PF00382.19 gi|433638603|ref|YP_007284363.1| - 1.3e-34 118.0 0.1 4.3e-17 61.9 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|433638603|ref|YP_007284363.1| - 7.4e-17 60.6 2.9 1.4e-16 59.7 2.9 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Ribosomal_S27e PF01667.17 gi|433638603|ref|YP_007284363.1| - 6.7e-05 22.5 0.2 0.00014 21.5 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S27 PhnA_Zn_Ribbon PF08274.12 gi|433638603|ref|YP_007284363.1| - 0.011 15.7 1.2 0.023 14.6 1.2 1.5 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Cyclin_N PF00134.23 gi|433638603|ref|YP_007284363.1| - 0.15 11.8 0.0 0.89 9.3 0.0 2.0 2 0 0 2 2 2 0 Cyclin, N-terminal domain OrfB_Zn_ribbon PF07282.11 gi|433638603|ref|YP_007284363.1| - 0.19 11.7 0.8 0.47 10.4 0.8 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain A2L_zn_ribbon PF08792.10 gi|433638603|ref|YP_007284363.1| - 1.2 8.9 2.8 22 4.9 2.8 2.3 1 1 1 2 2 2 0 A2L zinc ribbon domain ERCC3_RAD25_C PF16203.5 gi|433638605|ref|YP_007284365.1| - 9.2e-21 74.2 0.0 1.3e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 gi|433638605|ref|YP_007284365.1| - 3.4e-14 53.2 0.0 5.3e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|433638605|ref|YP_007284365.1| - 5.8e-14 52.4 0.0 2.7e-13 50.2 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|433638605|ref|YP_007284365.1| - 7.6e-08 31.5 0.0 9.4e-08 31.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DEAD PF00270.29 gi|433638605|ref|YP_007284365.1| - 0.00031 20.6 0.0 0.00092 19.0 0.0 1.8 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_33 PF13671.6 gi|433638605|ref|YP_007284365.1| - 0.0017 18.5 0.8 0.054 13.7 0.0 3.6 3 2 2 5 5 5 1 AAA domain AAA_22 PF13401.6 gi|433638605|ref|YP_007284365.1| - 0.0039 17.5 0.5 0.079 13.2 0.2 3.1 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|433638605|ref|YP_007284365.1| - 0.006 16.3 0.0 0.016 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|433638605|ref|YP_007284365.1| - 0.027 14.5 0.0 0.28 11.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|433638605|ref|YP_007284365.1| - 0.031 14.7 0.3 1.2 9.5 0.0 3.1 3 0 0 3 3 3 0 AAA ATPase domain AAA_25 PF13481.6 gi|433638605|ref|YP_007284365.1| - 0.05 13.2 0.4 0.31 10.6 0.0 2.5 2 1 1 3 3 3 0 AAA domain AAA PF00004.29 gi|433638605|ref|YP_007284365.1| - 0.059 13.8 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) UvdE PF03851.14 gi|433638605|ref|YP_007284365.1| - 0.22 10.7 0.0 0.4 9.9 0.0 1.3 1 0 0 1 1 1 0 UV-endonuclease UvdE DegT_DnrJ_EryC1 PF01041.17 gi|433638606|ref|YP_007284366.1| - 1.8e-09 37.4 0.0 5.7e-09 35.8 0.0 1.7 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Phosphodiest PF01663.22 gi|433638607|ref|YP_007284367.1| - 4.6e-34 118.6 0.0 1.5e-32 113.6 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Acetyltransf_6 PF13480.7 gi|433638608|ref|YP_007284368.1| - 2.2e-16 60.3 0.3 6.5e-16 58.8 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain DZR PF12773.7 gi|433638609|ref|YP_007284369.1| - 0.013 15.5 0.3 0.017 15.1 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon RecR PF02132.15 gi|433638609|ref|YP_007284369.1| - 0.03 13.9 0.7 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 RecR protein DUF3268 PF11672.8 gi|433638609|ref|YP_007284369.1| - 0.038 14.3 0.3 0.047 14.0 0.3 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain Zn-ribbon_8 PF09723.10 gi|433638609|ref|YP_007284369.1| - 0.042 14.0 3.6 0.3 11.2 2.9 2.0 1 1 1 2 2 2 0 Zinc ribbon domain zf-CSL PF05207.13 gi|433638609|ref|YP_007284369.1| - 0.063 13.0 0.8 0.091 12.5 0.8 1.3 1 1 0 1 1 1 0 CSL zinc finger zf-DNL PF05180.12 gi|433638609|ref|YP_007284369.1| - 0.067 13.1 0.7 0.088 12.8 0.7 1.2 1 0 0 1 1 1 0 DNL zinc finger zf-UDP PF14569.6 gi|433638609|ref|YP_007284369.1| - 0.067 13.3 1.8 0.89 9.7 1.3 2.0 1 1 1 2 2 2 0 Zinc-binding RING-finger HypA PF01155.19 gi|433638609|ref|YP_007284369.1| - 0.07 13.2 0.3 0.073 13.1 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 gi|433638609|ref|YP_007284369.1| - 0.074 13.3 2.8 0.29 11.4 0.2 2.1 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain DUF1610 PF07754.11 gi|433638609|ref|YP_007284369.1| - 0.081 12.9 7.4 0.11 12.5 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) zf-C2HC5 PF06221.13 gi|433638609|ref|YP_007284369.1| - 0.085 12.9 2.6 0.28 11.2 2.6 1.8 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Cas_CXXC_CXXC PF09706.10 gi|433638609|ref|YP_007284369.1| - 0.089 13.0 1.1 1 9.6 0.1 2.2 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_CXXC_CXXC) Zn_ribbon_SprT PF17283.2 gi|433638609|ref|YP_007284369.1| - 0.12 12.3 2.9 0.84 9.6 0.1 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain SIS PF01380.22 gi|433638611|ref|YP_007284371.1| - 1.1e-47 161.2 0.4 2.7e-22 79.0 0.0 2.8 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 gi|433638611|ref|YP_007284371.1| - 2.9e-21 76.1 0.1 7.5e-21 74.7 0.1 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|433638611|ref|YP_007284371.1| - 2.5e-18 66.2 0.0 4.6e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|433638611|ref|YP_007284371.1| - 0.066 12.1 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Prok-RING_1 PF14446.6 gi|433638611|ref|YP_007284371.1| - 0.11 12.5 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 CBS PF00571.28 gi|433638612|ref|YP_007284372.1| - 1.3e-25 89.6 3.2 1.8e-12 47.5 0.0 2.1 2 0 0 2 2 2 2 CBS domain DoxX PF07681.12 gi|433638613|ref|YP_007284373.1| - 1.2e-10 41.8 10.2 1.2e-10 41.8 10.2 1.7 1 1 1 2 2 2 1 DoxX DoxD PF04173.13 gi|433638613|ref|YP_007284373.1| - 0.00069 19.6 4.4 0.0011 18.9 4.4 1.3 1 0 0 1 1 1 1 TQO small subunit DoxD Form_Nir_trans PF01226.17 gi|433638614|ref|YP_007284374.1| - 7.5e-43 146.6 17.3 8.3e-43 146.4 17.3 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter AI-2E_transport PF01594.16 gi|433638615|ref|YP_007284375.1| - 3e-39 135.1 31.0 3.6e-39 134.8 31.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter SfLAP PF11139.8 gi|433638616|ref|YP_007284376.1| - 3.4e-19 69.1 16.6 4.1e-19 68.9 16.6 1.1 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein DUF412 PF04217.13 gi|433638616|ref|YP_007284376.1| - 0.11 12.3 0.2 0.2 11.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF412 Caa3_CtaG PF09678.10 gi|433638619|ref|YP_007284379.1| - 0.014 14.8 0.1 0.018 14.5 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) Bac_globin PF01152.21 gi|433638620|ref|YP_007284380.1| - 3.4e-21 75.6 0.0 3.7e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 Bacterial-like globin Protoglobin PF11563.8 gi|433638620|ref|YP_007284380.1| - 0.039 13.8 0.0 0.094 12.6 0.0 1.7 1 1 0 1 1 1 0 Protoglobin HTH_20 PF12840.7 gi|433638621|ref|YP_007284381.1| - 0.0051 16.8 0.1 0.0069 16.4 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433638621|ref|YP_007284381.1| - 0.054 13.4 0.1 0.072 13.0 0.1 1.3 1 0 0 1 1 1 0 MarR family UPF0175 PF03683.13 gi|433638622|ref|YP_007284382.1| - 4.7e-12 45.4 0.2 6.6e-12 45.0 0.2 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0175) ParD_antitoxin PF03693.14 gi|433638622|ref|YP_007284382.1| - 0.015 15.7 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RPAP3_C PF13877.6 gi|433638622|ref|YP_007284382.1| - 0.03 14.9 0.0 0.04 14.4 0.0 1.2 1 0 0 1 1 1 0 Potential Monad-binding region of RPAP3 DUF4157 PF13699.6 gi|433638624|ref|YP_007284384.1| - 3e-30 104.2 0.4 1.1e-29 102.4 0.4 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) Peptidase_M91 PF14891.6 gi|433638624|ref|YP_007284384.1| - 0.025 14.9 0.9 0.04 14.2 0.1 1.8 2 0 0 2 2 2 0 Effector protein TT_ORF2a PF08197.11 gi|433638624|ref|YP_007284384.1| - 0.043 13.8 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 pORF2a truncated protein Phasin PF05597.11 gi|433638624|ref|YP_007284384.1| - 0.056 13.5 5.5 0.94 9.5 4.6 2.9 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF2530 PF10745.9 gi|433638625|ref|YP_007284385.1| - 0.0079 16.4 0.6 0.0079 16.4 0.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF2530) adh_short PF00106.25 gi|433638626|ref|YP_007284386.1| - 7.6e-28 97.3 0.0 6.9e-26 90.9 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|433638626|ref|YP_007284386.1| - 4.5e-17 62.4 0.1 6.3e-17 61.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|433638626|ref|YP_007284386.1| - 2.8e-08 33.9 0.1 3.7e-08 33.5 0.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433638626|ref|YP_007284386.1| - 4.4e-05 23.0 0.1 6.4e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|433638626|ref|YP_007284386.1| - 0.00091 18.4 0.3 0.0014 17.8 0.3 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|433638626|ref|YP_007284386.1| - 0.0027 17.6 0.3 0.004 17.1 0.3 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 gi|433638626|ref|YP_007284386.1| - 0.016 14.6 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Shikimate_DH PF01488.20 gi|433638626|ref|YP_007284386.1| - 0.077 13.1 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase RNase_H_2 PF13482.6 gi|433638627|ref|YP_007284387.1| - 0.017 15.2 0.0 0.04 13.9 0.0 1.6 2 0 0 2 2 2 0 RNase_H superfamily Copper-bind PF00127.20 gi|433638628|ref|YP_007284388.1| - 2.2e-14 53.7 0.0 5.3e-14 52.4 0.0 1.7 2 0 0 2 2 2 1 Copper binding proteins, plastocyanin/azurin family Rhodanese PF00581.20 gi|433638629|ref|YP_007284389.1| - 1.7e-11 44.6 0.0 1.9e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Cob_adeno_trans PF01923.18 gi|433638631|ref|YP_007284391.1| - 7.9e-55 185.5 0.0 8.9e-55 185.3 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase zf-H2C2_2 PF13465.6 gi|433638634|ref|YP_007284394.1| - 6e-06 26.4 1.9 0.0022 18.4 0.1 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 gi|433638634|ref|YP_007284394.1| - 6.7e-05 23.1 0.8 0.064 13.7 0.0 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zinc_ribbon_9 PF14369.6 gi|433638634|ref|YP_007284394.1| - 0.0012 19.0 0.5 0.072 13.4 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon Rubredoxin PF00301.20 gi|433638634|ref|YP_007284394.1| - 0.0017 18.3 2.4 0.64 10.1 0.5 2.1 2 0 0 2 2 2 2 Rubredoxin Ribosomal_S27e PF01667.17 gi|433638634|ref|YP_007284394.1| - 0.0047 16.6 0.8 0.049 13.4 0.0 2.0 1 1 1 2 2 2 1 Ribosomal protein S27 DUF1610 PF07754.11 gi|433638634|ref|YP_007284394.1| - 0.0085 16.0 1.0 1.9 8.5 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) Zn_Tnp_IS1595 PF12760.7 gi|433638634|ref|YP_007284394.1| - 0.011 15.7 0.7 0.016 15.1 0.7 1.3 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433638634|ref|YP_007284394.1| - 0.012 15.8 0.2 1.6 8.9 0.1 2.1 2 0 0 2 2 2 0 Zinc ribbon domain DUF3797 PF12677.7 gi|433638634|ref|YP_007284394.1| - 0.013 15.4 0.9 1.4 8.8 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) DUF983 PF06170.12 gi|433638634|ref|YP_007284394.1| - 0.02 15.3 0.5 2.3 8.7 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF983) DUF1272 PF06906.11 gi|433638634|ref|YP_007284394.1| - 0.027 14.6 0.1 4 7.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Zn_ribbon_SprT PF17283.2 gi|433638634|ref|YP_007284394.1| - 0.043 13.7 1.7 4.3 7.3 0.3 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DUF3268 PF11672.8 gi|433638634|ref|YP_007284394.1| - 0.044 14.1 0.2 0.045 14.1 0.2 1.0 1 0 0 1 1 1 0 zinc-finger-containing domain zf-trcl PF13451.6 gi|433638634|ref|YP_007284394.1| - 0.046 13.6 0.9 0.49 10.3 0.1 2.0 2 0 0 2 2 2 0 Probable zinc-ribbon domain TFIIS_C PF01096.18 gi|433638634|ref|YP_007284394.1| - 0.047 13.5 1.3 0.35 10.7 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-C4_Topoisom PF01396.19 gi|433638634|ref|YP_007284394.1| - 0.054 13.3 0.5 0.93 9.3 0.0 2.1 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_5 PF13719.6 gi|433638634|ref|YP_007284394.1| - 0.057 13.2 3.2 1.3 8.9 0.1 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-LITAF-like PF10601.9 gi|433638634|ref|YP_007284394.1| - 0.067 13.5 0.7 4.1 7.8 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|433638634|ref|YP_007284394.1| - 0.07 13.2 2.1 8 6.6 0.2 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_Tnp_IS1 PF03811.13 gi|433638634|ref|YP_007284394.1| - 0.078 12.7 0.4 7.8 6.3 0.0 2.1 2 0 0 2 2 2 0 InsA N-terminal domain zf-Mss51 PF13824.6 gi|433638634|ref|YP_007284394.1| - 0.12 12.4 4.3 3.6 7.7 0.5 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 HypA PF01155.19 gi|433638634|ref|YP_007284394.1| - 0.15 12.1 0.4 0.33 11.0 0.4 1.6 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CpXC PF14353.6 gi|433638634|ref|YP_007284394.1| - 0.31 11.1 2.2 21 5.2 2.1 2.1 1 1 0 1 1 1 0 CpXC protein Rubredoxin_2 PF18073.1 gi|433638634|ref|YP_007284394.1| - 0.33 10.7 5.4 0.82 9.4 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-IS66 PF13005.7 gi|433638634|ref|YP_007284394.1| - 1.4 9.3 5.8 6.1 7.3 0.7 2.2 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 Elicitin PF00964.17 gi|433638635|ref|YP_007284395.1| - 0.017 15.2 0.6 0.018 15.1 0.6 1.1 1 0 0 1 1 1 0 Elicitin Inositol_P PF00459.25 gi|433638637|ref|YP_007284397.1| - 3e-54 184.4 0.0 4.6e-54 183.8 0.0 1.2 1 0 0 1 1 1 1 Inositol monophosphatase family NAD_kinase PF01513.21 gi|433638637|ref|YP_007284397.1| - 4.7e-30 104.8 0.4 9.4e-30 103.8 0.4 1.5 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|433638637|ref|YP_007284397.1| - 0.011 15.4 0.8 0.055 13.1 0.1 2.2 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain PaaA_PaaC PF05138.12 gi|433638638|ref|YP_007284398.1| - 3.1e-73 246.2 0.3 4e-73 245.8 0.3 1.1 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein PaaB PF06243.11 gi|433638639|ref|YP_007284399.1| - 1.2e-18 67.1 0.2 1.8e-18 66.6 0.1 1.3 1 1 0 1 1 1 1 Phenylacetic acid degradation B PaaA_PaaC PF05138.12 gi|433638640|ref|YP_007284400.1| - 2.4e-51 174.4 0.8 4e-51 173.7 0.8 1.3 1 1 0 1 1 1 1 Phenylacetic acid catabolic protein MiaE_2 PF13794.6 gi|433638640|ref|YP_007284400.1| - 5.1e-06 26.3 1.2 9e-06 25.5 1.2 1.3 1 0 0 1 1 1 1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like Rubrerythrin PF02915.17 gi|433638640|ref|YP_007284400.1| - 0.0086 16.5 0.1 0.057 13.8 0.1 2.1 1 1 0 1 1 1 1 Rubrerythrin Haem_oxygenas_2 PF14518.6 gi|433638640|ref|YP_007284400.1| - 0.055 13.2 1.9 0.54 10.0 1.8 2.1 1 1 0 1 1 1 0 Iron-containing redox enzyme FeS_assembly_P PF01883.19 gi|433638641|ref|YP_007284401.1| - 9.5e-23 80.2 0.4 1.3e-22 79.7 0.4 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein HMA PF00403.26 gi|433638641|ref|YP_007284401.1| - 0.036 14.5 0.0 0.065 13.7 0.0 1.4 1 0 0 1 1 1 0 Heavy-metal-associated domain Zn-ribbon_8 PF09723.10 gi|433638642|ref|YP_007284402.1| - 0.00033 20.7 4.7 0.0097 16.0 0.2 2.2 2 0 0 2 2 2 2 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|433638642|ref|YP_007284402.1| - 0.015 14.8 5.8 0.13 11.8 5.8 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|433638642|ref|YP_007284402.1| - 0.034 13.5 3.1 0.28 10.7 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|433638642|ref|YP_007284402.1| - 0.042 14.2 4.2 0.044 14.2 4.2 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|433638642|ref|YP_007284402.1| - 0.077 13.7 3.5 0.14 12.9 3.5 1.5 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Nudix_N_2 PF14803.6 gi|433638642|ref|YP_007284402.1| - 0.15 12.0 4.5 0.48 10.4 4.4 1.7 1 1 1 2 2 2 0 Nudix N-terminal OrfB_Zn_ribbon PF07282.11 gi|433638642|ref|YP_007284402.1| - 0.16 11.9 3.3 0.2 11.6 3.3 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain 4HBT PF03061.22 gi|433638643|ref|YP_007284403.1| - 2.7e-15 56.5 0.2 3.9e-15 55.9 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|433638643|ref|YP_007284403.1| - 7.8e-05 22.8 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) HTH_20 PF12840.7 gi|433638644|ref|YP_007284404.1| - 0.0034 17.4 0.4 0.0045 17.0 0.4 1.4 1 1 0 1 1 1 1 Helix-turn-helix domain DprA_WH PF17782.1 gi|433638644|ref|YP_007284404.1| - 0.09 12.9 0.1 0.18 12.0 0.1 1.6 1 0 0 1 1 1 0 DprA winged helix domain GAF_2 PF13185.6 gi|433638645|ref|YP_007284405.1| - 2.3e-24 86.3 8.2 1.8e-17 63.9 0.3 3.1 3 0 0 3 3 3 2 GAF domain BAT PF15915.5 gi|433638645|ref|YP_007284405.1| - 4.8e-24 85.0 3.2 4.8e-24 85.0 3.2 2.9 2 1 0 2 2 2 1 GAF and HTH_10 associated domain PAS_9 PF13426.7 gi|433638645|ref|YP_007284405.1| - 3.1e-22 78.8 0.0 1.1e-16 61.0 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|433638645|ref|YP_007284405.1| - 3.2e-20 72.4 2.9 4.6e-11 42.9 0.4 3.1 2 0 0 2 2 2 2 PAS fold GAF PF01590.26 gi|433638645|ref|YP_007284405.1| - 2.2e-19 70.4 0.1 1.4e-08 35.4 0.0 2.6 2 0 0 2 2 2 2 GAF domain HTH_10 PF04967.12 gi|433638645|ref|YP_007284405.1| - 2.7e-19 68.7 0.0 1.8e-18 66.0 0.0 2.3 2 0 0 2 2 2 1 HTH DNA binding domain GAF_3 PF13492.6 gi|433638645|ref|YP_007284405.1| - 3.7e-18 66.1 0.2 1.4e-08 35.1 0.0 2.4 2 0 0 2 2 2 2 GAF domain PAS PF00989.25 gi|433638645|ref|YP_007284405.1| - 4.5e-14 52.4 0.1 1.3e-09 38.0 0.0 2.9 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.7 gi|433638645|ref|YP_007284405.1| - 2.2e-10 40.3 0.4 0.00011 22.2 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.12 gi|433638645|ref|YP_007284405.1| - 1.5e-06 28.4 0.1 3.7e-06 27.1 0.1 1.8 1 0 0 1 1 1 1 PAS fold PAS_10 PF13596.6 gi|433638645|ref|YP_007284405.1| - 1.9e-06 28.4 0.0 0.0012 19.5 0.0 2.9 3 0 0 3 3 2 1 PAS domain PAS_7 PF12860.7 gi|433638645|ref|YP_007284405.1| - 3.2e-06 27.3 1.7 0.055 13.6 0.1 4.0 3 1 0 3 3 3 2 PAS fold HTH_20 PF12840.7 gi|433638645|ref|YP_007284405.1| - 0.00014 21.8 8.2 0.00067 19.7 0.4 3.4 4 0 0 4 4 4 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433638645|ref|YP_007284405.1| - 0.0026 17.3 0.0 1.3 8.6 0.0 2.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|433638645|ref|YP_007284405.1| - 0.0029 17.4 0.1 0.0076 16.1 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433638645|ref|YP_007284405.1| - 0.0063 16.4 2.3 1 9.3 0.8 3.3 3 0 0 3 3 3 1 MarR family HTH_IclR PF09339.10 gi|433638645|ref|YP_007284405.1| - 0.014 15.2 0.5 0.17 11.7 0.2 2.4 2 0 0 2 2 2 0 IclR helix-turn-helix domain Sigma70_r4 PF04545.16 gi|433638645|ref|YP_007284405.1| - 0.015 14.8 1.9 3.8 7.1 0.0 3.4 4 0 0 4 4 3 0 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|433638645|ref|YP_007284405.1| - 0.016 15.4 0.0 3 8.1 0.0 2.6 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_30 PF13556.6 gi|433638645|ref|YP_007284405.1| - 0.1 12.4 0.0 10 6.0 0.1 2.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Acetyltransf_1 PF00583.25 gi|433638646|ref|YP_007284406.1| - 3.9e-15 56.1 0.0 4.2e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433638646|ref|YP_007284406.1| - 2.3e-10 40.5 0.0 2.9e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638646|ref|YP_007284406.1| - 1.5e-07 31.7 0.0 2.2e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433638646|ref|YP_007284406.1| - 2.2e-05 24.5 0.0 4.6e-05 23.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|433638646|ref|YP_007284406.1| - 0.025 14.3 0.2 0.037 13.7 0.2 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433638646|ref|YP_007284406.1| - 0.032 14.2 0.0 0.054 13.5 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_13 PF13880.6 gi|433638646|ref|YP_007284406.1| - 0.039 13.9 0.0 0.075 13.0 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 gi|433638646|ref|YP_007284406.1| - 0.1 12.8 0.0 0.25 11.5 0.0 1.7 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Bac_luciferase PF00296.20 gi|433638647|ref|YP_007284407.1| - 6.1e-56 190.1 0.4 7.2e-56 189.9 0.4 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Peptidase_M24 PF00557.24 gi|433638648|ref|YP_007284408.1| - 9.4e-29 100.6 0.1 1.4e-28 100.0 0.1 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|433638648|ref|YP_007284408.1| - 2.6e-06 28.1 0.1 6.7e-06 26.8 0.1 1.8 1 1 0 1 1 1 1 Creatinase/Prolidase N-terminal domain RCC1_2 PF13540.6 gi|433638648|ref|YP_007284408.1| - 0.12 12.2 0.2 0.27 11.1 0.2 1.5 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DUF433 PF04255.14 gi|433638648|ref|YP_007284408.1| - 0.14 12.0 0.0 0.35 10.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF433) TPP_enzyme_M PF00205.22 gi|433638649|ref|YP_007284409.1| - 1.9e-36 124.9 0.1 3.7e-36 123.9 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|433638649|ref|YP_007284409.1| - 3.3e-34 117.9 0.8 7.3e-34 116.8 0.8 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|433638649|ref|YP_007284409.1| - 6.1e-32 110.6 2.0 3.7e-30 104.8 0.0 3.3 3 1 0 4 4 4 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PNTB PF02233.16 gi|433638649|ref|YP_007284409.1| - 0.051 12.5 0.1 0.23 10.3 0.1 1.9 2 0 0 2 2 2 0 NAD(P) transhydrogenase beta subunit NHL PF01436.21 gi|433638649|ref|YP_007284409.1| - 0.12 12.4 0.1 0.35 11.0 0.1 1.8 1 0 0 1 1 1 0 NHL repeat Epimerase PF01370.21 gi|433638650|ref|YP_007284410.1| - 7.4e-44 150.0 0.2 9.6e-44 149.6 0.2 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433638650|ref|YP_007284410.1| - 2.6e-42 145.4 0.1 1e-41 143.5 0.1 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|433638650|ref|YP_007284410.1| - 4.8e-24 84.8 0.0 6.8e-24 84.3 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|433638650|ref|YP_007284410.1| - 2e-16 60.0 1.5 2.5e-16 59.6 1.5 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|433638650|ref|YP_007284410.1| - 3.8e-12 46.5 0.2 6.9e-12 45.6 0.2 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 gi|433638650|ref|YP_007284410.1| - 4e-12 45.9 0.0 2.5e-10 40.0 0.1 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|433638650|ref|YP_007284410.1| - 9.3e-11 41.4 0.6 1.1e-06 28.0 0.0 2.3 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|433638650|ref|YP_007284410.1| - 9.3e-07 28.5 0.4 9.3e-07 28.5 0.4 1.7 2 1 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 gi|433638650|ref|YP_007284410.1| - 1.5e-05 25.0 0.5 3.3e-05 23.9 0.5 1.6 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 gi|433638650|ref|YP_007284410.1| - 0.00017 21.2 0.8 0.0019 17.8 0.3 2.1 2 0 0 2 2 2 1 NmrA-like family adh_short_C2 PF13561.6 gi|433638650|ref|YP_007284410.1| - 0.00082 19.0 1.9 0.001 18.7 0.7 1.7 2 1 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase TM_helix PF05552.12 gi|433638651|ref|YP_007284411.1| - 1.8e-16 59.8 3.8 5.9e-12 45.4 0.9 3.1 3 0 0 3 3 3 2 Conserved TM helix 3-HAO PF06052.12 gi|433638651|ref|YP_007284411.1| - 0.2 11.3 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase Bacillus_PapR PF05968.11 gi|433638651|ref|YP_007284411.1| - 0.2 11.5 0.8 0.57 10.1 0.8 1.7 1 0 0 1 1 1 0 Bacillus PapR protein TetR_C_6 PF13977.6 gi|433638653|ref|YP_007284413.1| - 0.37 11.0 6.8 0.57 10.4 6.7 1.4 1 1 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal HD PF01966.22 gi|433638654|ref|YP_007284414.1| - 5.1e-10 39.6 0.0 7.2e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 HD domain HD_6 PF18019.1 gi|433638654|ref|YP_007284414.1| - 0.14 12.2 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 HD domain MmlI PF09448.10 gi|433638655|ref|YP_007284415.1| - 3.2e-21 75.9 4.7 6.8e-12 45.9 0.4 3.9 2 2 0 2 2 2 2 Methylmuconolactone methyl-isomerase EthD PF07110.11 gi|433638655|ref|YP_007284415.1| - 5.2e-16 59.6 13.5 6.4e-11 43.3 1.3 3.7 2 2 0 2 2 2 2 EthD domain ABM PF03992.16 gi|433638655|ref|YP_007284415.1| - 0.087 12.9 2.6 5.6 7.2 0.0 3.2 3 2 0 3 3 3 0 Antibiotic biosynthesis monooxygenase DUF4543 PF15076.6 gi|433638655|ref|YP_007284415.1| - 0.45 10.7 1.3 1.5 9.0 0.0 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4543) Ferritin_2 PF13668.6 gi|433638657|ref|YP_007284417.1| - 2.6e-39 134.5 0.0 1e-38 132.6 0.0 1.9 3 0 0 3 3 3 1 Ferritin-like domain HTH_10 PF04967.12 gi|433638658|ref|YP_007284418.1| - 5.1e-15 55.0 0.0 8.2e-15 54.4 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433638658|ref|YP_007284418.1| - 1e-12 48.2 3.7 1.4e-12 47.8 3.7 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433638658|ref|YP_007284418.1| - 6e-05 22.5 0.1 0.00012 21.6 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|433638658|ref|YP_007284418.1| - 0.017 15.1 0.1 0.033 14.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_AsnC-type PF13404.6 gi|433638658|ref|YP_007284418.1| - 0.046 13.6 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF2587 PF10759.9 gi|433638659|ref|YP_007284419.1| - 0.0032 17.0 0.0 0.0038 16.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2587) DUF1198 PF06711.11 gi|433638659|ref|YP_007284419.1| - 0.0084 16.2 0.0 0.0091 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1198) DUF4777 PF16007.5 gi|433638659|ref|YP_007284419.1| - 0.012 15.9 0.1 0.023 14.9 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4777) DUF5601 PF18151.1 gi|433638659|ref|YP_007284419.1| - 0.16 12.3 0.1 0.31 11.4 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5601) Aminotran_5 PF00266.19 gi|433638660|ref|YP_007284420.1| - 9.1e-11 41.3 0.0 1.5e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V GDC-P PF02347.16 gi|433638660|ref|YP_007284420.1| - 5.7e-05 22.1 0.0 0.00043 19.2 0.0 2.0 2 0 0 2 2 2 1 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 gi|433638660|ref|YP_007284420.1| - 0.00017 21.0 0.0 0.00032 20.1 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|433638660|ref|YP_007284420.1| - 0.0064 15.8 0.0 0.012 15.0 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|433638660|ref|YP_007284420.1| - 0.11 11.0 0.0 0.17 10.4 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme GDC-P PF02347.16 gi|433638661|ref|YP_007284421.1| - 1.4e-98 330.5 0.0 1.6e-98 330.3 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein DUF2514 PF10721.9 gi|433638661|ref|YP_007284421.1| - 0.029 14.4 0.7 0.29 11.1 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2514) AI-2E_transport PF01594.16 gi|433638662|ref|YP_007284422.1| - 7.9e-37 127.1 33.7 9.1e-37 126.9 33.7 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF4179 PF13786.6 gi|433638662|ref|YP_007284422.1| - 0.48 10.9 0.0 0.48 10.9 0.0 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4179) HMG_CoA_synt_N PF01154.17 gi|433638663|ref|YP_007284423.1| - 3e-23 82.6 0.0 4.3e-23 82.1 0.0 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMG_CoA_synt_C PF08540.10 gi|433638663|ref|YP_007284423.1| - 5.8e-23 81.9 0.0 9.4e-23 81.2 0.0 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal TPR_10 PF13374.6 gi|433638663|ref|YP_007284423.1| - 0.099 12.5 3.0 0.13 12.2 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Pilin_N PF07790.11 gi|433638664|ref|YP_007284424.1| - 0.49 11.3 0.1 0.49 11.3 0.1 4.7 4 2 2 6 6 6 0 Archaeal Type IV pilin, N-terminal YceI PF04264.13 gi|433638664|ref|YP_007284424.1| - 0.75 10.3 6.5 1.7 9.2 0.3 3.9 3 1 0 3 3 3 0 YceI-like domain DUF2150 PF09920.9 gi|433638665|ref|YP_007284425.1| - 1.6e-70 236.9 9.4 1.8e-70 236.8 9.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) TatD_DNase PF01026.21 gi|433638666|ref|YP_007284426.1| - 4.3e-19 68.9 0.0 1.6e-17 63.7 0.0 2.0 1 1 0 1 1 1 1 TatD related DNase Peptidase_S8 PF00082.22 gi|433638667|ref|YP_007284427.1| - 1.4e-45 155.8 8.1 1.4e-45 155.8 8.1 1.6 2 0 0 2 2 2 1 Subtilase family PKD PF00801.20 gi|433638667|ref|YP_007284427.1| - 4.9e-05 23.1 0.7 4.9e-05 23.1 0.7 3.3 3 0 0 3 3 3 1 PKD domain TAT_signal PF10518.9 gi|433638667|ref|YP_007284427.1| - 0.00061 19.5 2.1 0.00061 19.5 2.1 2.5 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence Invasin_D3 PF09134.10 gi|433638667|ref|YP_007284427.1| - 0.043 14.1 3.7 0.24 11.7 3.7 2.4 1 0 0 1 1 1 0 Invasin, domain 3 Cadherin-like PF12733.7 gi|433638667|ref|YP_007284427.1| - 0.19 12.3 3.5 1.8 9.2 0.8 2.7 2 0 0 2 2 2 0 Cadherin-like beta sandwich domain NYN PF01936.18 gi|433638668|ref|YP_007284428.1| - 2.9e-18 66.7 0.0 3.8e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 NYN domain PIN7 PF18475.1 gi|433638668|ref|YP_007284428.1| - 0.055 14.1 0.0 0.082 13.6 0.0 1.3 1 0 0 1 1 1 0 PIN domain GCV_T PF01571.21 gi|433638669|ref|YP_007284429.1| - 1.5e-82 276.8 0.0 1.9e-82 276.5 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|433638669|ref|YP_007284429.1| - 3e-22 78.3 0.6 6.1e-22 77.3 0.6 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 gi|433638669|ref|YP_007284429.1| - 0.047 13.8 0.1 2.7 8.1 0.0 2.2 1 1 1 2 2 2 0 Sarcosine oxidase, gamma subunit family GCV_H PF01597.19 gi|433638670|ref|YP_007284430.1| - 2.1e-43 147.1 0.0 2.3e-43 147.0 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|433638670|ref|YP_007284430.1| - 0.0075 16.1 0.3 0.015 15.1 0.2 1.6 1 1 1 2 2 2 1 Biotin-requiring enzyme HTH_3 PF01381.22 gi|433638671|ref|YP_007284431.1| - 7.4e-09 35.5 0.0 1.5e-08 34.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|433638671|ref|YP_007284431.1| - 2.5e-08 34.1 1.7 1.2e-07 31.9 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|433638671|ref|YP_007284431.1| - 9.2e-06 25.6 0.0 2.5e-05 24.2 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|433638671|ref|YP_007284431.1| - 0.057 13.3 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_24 PF13412.6 gi|433638671|ref|YP_007284431.1| - 0.097 12.2 0.0 0.32 10.6 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|433638671|ref|YP_007284431.1| - 0.11 13.0 0.0 0.5 10.9 0.0 2.1 2 1 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain IspD PF01128.19 gi|433638671|ref|YP_007284431.1| - 0.14 11.9 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YdjM PF04307.14 gi|433638672|ref|YP_007284432.1| - 2.8e-09 36.5 2.2 3.3e-09 36.3 2.2 1.3 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase TraA PF05513.11 gi|433638672|ref|YP_007284432.1| - 0.033 14.5 0.1 0.057 13.8 0.1 1.5 1 0 0 1 1 1 0 TraA Acetyltransf_1 PF00583.25 gi|433638673|ref|YP_007284433.1| - 2.8e-15 56.6 0.0 3.5e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433638673|ref|YP_007284433.1| - 1.5e-10 41.3 0.0 2.1e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433638673|ref|YP_007284433.1| - 1.8e-10 40.8 0.0 2.5e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|433638673|ref|YP_007284433.1| - 4.3e-07 29.7 0.0 4.1e-06 26.5 0.0 2.2 2 1 1 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433638673|ref|YP_007284433.1| - 9.8e-06 25.6 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|433638673|ref|YP_007284433.1| - 0.00064 19.8 0.0 0.0012 18.9 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|433638673|ref|YP_007284433.1| - 0.0015 18.7 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433638673|ref|YP_007284433.1| - 0.003 18.2 0.0 0.0045 17.7 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433638673|ref|YP_007284433.1| - 0.0039 17.1 0.0 0.0071 16.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_13 PF13880.6 gi|433638673|ref|YP_007284433.1| - 0.046 13.7 0.0 0.081 12.9 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Thioredoxin_4 PF13462.6 gi|433638674|ref|YP_007284434.1| - 8.1e-35 120.4 0.0 9.4e-35 120.2 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|433638674|ref|YP_007284434.1| - 5.7e-15 55.6 1.9 3.6e-13 49.7 1.9 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 gi|433638674|ref|YP_007284434.1| - 0.0036 17.0 0.0 0.005 16.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433638674|ref|YP_007284434.1| - 0.0084 16.5 0.4 0.019 15.4 0.4 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|433638674|ref|YP_007284434.1| - 0.053 13.5 0.0 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin AAA PF00004.29 gi|433638675|ref|YP_007284435.1| - 8.4e-10 39.2 0.1 2.7e-09 37.5 0.0 2.0 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433638675|ref|YP_007284435.1| - 0.00016 22.0 0.1 0.31 11.3 0.0 3.4 3 1 0 4 4 4 1 AAA domain AAA_assoc_2 PF16193.5 gi|433638675|ref|YP_007284435.1| - 0.00016 21.9 1.1 0.00034 20.9 0.2 2.1 2 0 0 2 2 2 1 AAA C-terminal domain AAA_25 PF13481.6 gi|433638675|ref|YP_007284435.1| - 0.00065 19.3 0.6 0.028 14.0 0.0 3.0 3 0 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 gi|433638675|ref|YP_007284435.1| - 0.002 18.0 0.0 0.0048 16.8 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase RuvB_N PF05496.12 gi|433638675|ref|YP_007284435.1| - 0.0028 17.4 0.0 0.006 16.3 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|433638675|ref|YP_007284435.1| - 0.0057 17.1 0.1 0.038 14.4 0.0 2.4 2 1 0 3 3 3 1 AAA ATPase domain AAA_14 PF13173.6 gi|433638675|ref|YP_007284435.1| - 0.02 14.9 0.0 0.21 11.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|433638675|ref|YP_007284435.1| - 0.02 14.9 0.0 0.061 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Bac_DnaA PF00308.18 gi|433638675|ref|YP_007284435.1| - 0.032 14.1 0.1 1.1 9.1 0.0 2.7 3 0 0 3 3 3 0 Bacterial dnaA protein Hydin_ADK PF17213.3 gi|433638675|ref|YP_007284435.1| - 0.04 14.2 0.9 0.084 13.1 0.1 2.0 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Zeta_toxin PF06414.12 gi|433638675|ref|YP_007284435.1| - 0.049 12.9 0.0 0.098 11.9 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 gi|433638675|ref|YP_007284435.1| - 0.056 13.7 0.0 0.21 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|433638675|ref|YP_007284435.1| - 0.066 13.8 0.1 0.46 11.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|433638675|ref|YP_007284435.1| - 0.07 13.5 0.0 0.17 12.3 0.0 1.8 1 1 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|433638675|ref|YP_007284435.1| - 0.098 12.8 0.0 0.32 11.1 0.0 2.0 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|433638675|ref|YP_007284435.1| - 0.11 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Rad17 PF03215.15 gi|433638675|ref|YP_007284435.1| - 0.24 11.3 0.0 0.48 10.3 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain Aminotran_1_2 PF00155.21 gi|433638676|ref|YP_007284436.1| - 4.9e-62 210.2 0.0 5.6e-62 210.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|433638676|ref|YP_007284436.1| - 0.016 13.8 0.0 0.032 12.8 0.0 1.4 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme Met_gamma_lyase PF06838.11 gi|433638676|ref|YP_007284436.1| - 0.16 10.5 0.0 0.23 10.0 0.0 1.1 1 0 0 1 1 1 0 Methionine gamma-lyase AAA_18 PF13238.6 gi|433638677|ref|YP_007284437.1| - 4.7e-21 75.7 0.1 8.5e-21 74.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|433638677|ref|YP_007284437.1| - 7.4e-08 32.8 1.8 1.2e-07 32.1 1.8 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|433638677|ref|YP_007284437.1| - 2.5e-06 27.7 0.4 4.6e-06 26.8 0.4 1.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|433638677|ref|YP_007284437.1| - 8.9e-05 22.8 0.1 0.00022 21.5 0.1 1.8 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|433638677|ref|YP_007284437.1| - 0.00033 21.1 1.4 0.0039 17.6 1.0 2.6 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 gi|433638677|ref|YP_007284437.1| - 0.00052 20.4 0.2 0.0018 18.7 0.2 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CoaE PF01121.20 gi|433638677|ref|YP_007284437.1| - 0.00066 19.4 1.5 0.029 14.0 0.3 2.1 2 0 0 2 2 2 1 Dephospho-CoA kinase dNK PF01712.19 gi|433638677|ref|YP_007284437.1| - 0.00081 19.3 0.1 0.17 11.7 0.0 2.2 1 1 0 2 2 2 1 Deoxynucleoside kinase Thymidylate_kin PF02223.17 gi|433638677|ref|YP_007284437.1| - 0.0009 19.0 0.3 0.014 15.1 0.3 2.1 1 1 0 1 1 1 1 Thymidylate kinase AAA_19 PF13245.6 gi|433638677|ref|YP_007284437.1| - 0.0028 18.0 0.0 0.0067 16.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|433638677|ref|YP_007284437.1| - 0.0041 17.5 1.5 0.053 13.9 1.5 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|433638677|ref|YP_007284437.1| - 0.0074 16.0 0.0 0.013 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|433638677|ref|YP_007284437.1| - 0.0088 16.4 0.0 0.014 15.8 0.0 1.3 1 0 0 1 1 1 1 RNA helicase ATP_bind_2 PF03668.15 gi|433638677|ref|YP_007284437.1| - 0.014 14.7 1.6 0.17 11.2 0.4 2.0 2 0 0 2 2 2 0 P-loop ATPase protein family MMR_HSR1 PF01926.23 gi|433638677|ref|YP_007284437.1| - 0.018 15.1 0.4 0.031 14.4 0.4 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase CPT PF07931.12 gi|433638677|ref|YP_007284437.1| - 0.019 14.8 3.4 0.037 13.9 3.4 1.5 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein KTI12 PF08433.10 gi|433638677|ref|YP_007284437.1| - 0.023 14.2 0.0 0.034 13.6 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF2075 PF09848.9 gi|433638677|ref|YP_007284437.1| - 0.034 13.4 0.0 0.047 12.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 gi|433638677|ref|YP_007284437.1| - 0.037 13.0 1.1 0.1 11.6 0.4 2.0 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 gi|433638677|ref|YP_007284437.1| - 0.037 13.9 1.4 0.062 13.2 0.2 1.9 2 1 0 2 2 2 0 NTPase AAA_24 PF13479.6 gi|433638677|ref|YP_007284437.1| - 0.046 13.4 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|433638677|ref|YP_007284437.1| - 0.047 13.4 0.1 0.1 12.3 0.0 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family DUF1970 PF09301.10 gi|433638677|ref|YP_007284437.1| - 0.055 13.7 0.2 0.13 12.5 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) SKI PF01202.22 gi|433638677|ref|YP_007284437.1| - 0.074 13.2 1.6 0.15 12.2 0.1 2.0 1 1 0 2 2 2 0 Shikimate kinase Ploopntkinase3 PF18751.1 gi|433638677|ref|YP_007284437.1| - 0.079 12.9 0.2 0.38 10.6 0.1 2.1 1 1 1 2 2 2 0 P-loop Nucleotide Kinase3 AAA_25 PF13481.6 gi|433638677|ref|YP_007284437.1| - 6.7 6.2 12.6 20 4.7 0.3 3.0 1 1 1 2 2 2 0 AAA domain CDP-OH_P_transf PF01066.21 gi|433638678|ref|YP_007284438.1| - 9.4e-09 35.9 0.8 9.4e-09 35.9 0.8 2.5 3 0 0 3 3 3 1 CDP-alcohol phosphatidyltransferase HTH_3 PF01381.22 gi|433638679|ref|YP_007284439.1| - 5.5e-11 42.3 0.4 7.8e-11 41.9 0.4 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|433638679|ref|YP_007284439.1| - 1.7e-08 34.6 0.2 2.6e-08 34.1 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|433638679|ref|YP_007284439.1| - 1.9e-07 31.0 0.1 2.9e-07 30.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|433638679|ref|YP_007284439.1| - 5.7e-05 22.9 1.2 8.3e-05 22.4 1.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|433638679|ref|YP_007284439.1| - 0.0086 16.0 0.1 0.015 15.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain RAP1 PF07218.11 gi|433638679|ref|YP_007284439.1| - 7.6 4.7 6.9 8.4 4.5 6.9 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) TIM PF00121.18 gi|433638680|ref|YP_007284440.1| - 1.6e-08 34.2 0.0 2.1e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|433638680|ref|YP_007284440.1| - 6.6e-06 25.6 1.3 6.6e-06 25.6 1.3 2.6 2 1 1 3 3 3 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|433638680|ref|YP_007284440.1| - 0.0034 16.5 4.9 0.0034 16.5 4.9 1.5 1 1 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|433638680|ref|YP_007284440.1| - 0.0097 15.3 8.0 0.0097 15.3 8.0 1.6 1 1 1 2 2 2 1 Nitronate monooxygenase Hydrolase_like PF13242.6 gi|433638680|ref|YP_007284440.1| - 0.014 15.4 1.3 0.024 14.7 0.3 1.9 2 0 0 2 2 2 0 HAD-hyrolase-like IGPS PF00218.21 gi|433638680|ref|YP_007284440.1| - 0.12 11.6 0.0 0.33 10.1 0.0 1.9 2 1 0 2 2 2 0 Indole-3-glycerol phosphate synthase TIR_2 PF13676.6 gi|433638681|ref|YP_007284441.1| - 2.3e-10 41.1 0.0 3.2e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 TIR domain DUF1863 PF08937.11 gi|433638681|ref|YP_007284441.1| - 2.4e-05 24.6 0.1 5.3e-05 23.5 0.1 1.6 1 1 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) Nuc_deoxyrib_tr PF05014.15 gi|433638681|ref|YP_007284441.1| - 2.9e-05 24.1 0.0 3.8e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase TIR PF01582.20 gi|433638681|ref|YP_007284441.1| - 0.058 13.2 0.0 0.082 12.7 0.0 1.2 1 0 0 1 1 1 0 TIR domain Nuc_deoxyri_tr2 PF15891.5 gi|433638681|ref|YP_007284441.1| - 0.1 12.9 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like DnaJ PF00226.31 gi|433638682|ref|YP_007284442.1| - 2.4e-08 34.0 0.0 3.4e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain ATPase-cat_bd PF12156.8 gi|433638682|ref|YP_007284442.1| - 1.9 9.3 10.2 7.2 7.4 0.8 3.2 2 1 1 3 3 3 0 Putative metal-binding domain of cation transport ATPase FpoO PF10621.9 gi|433638682|ref|YP_007284442.1| - 3.8 7.9 8.5 0.43 10.9 2.6 2.4 2 2 0 2 2 2 0 F420H2 dehydrogenase subunit FpoO DUF3054 PF11255.8 gi|433638683|ref|YP_007284443.1| - 2.4e-20 73.1 7.7 2.7e-20 72.9 7.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3054) ECH_1 PF00378.20 gi|433638686|ref|YP_007284446.1| - 4e-66 222.9 0.0 4.6e-66 222.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433638686|ref|YP_007284446.1| - 2e-35 122.9 0.0 1.2e-29 103.9 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase 3HCDH_N PF02737.18 gi|433638687|ref|YP_007284447.1| - 8e-62 208.3 3.3 1.3e-61 207.6 3.3 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|433638687|ref|YP_007284447.1| - 6.2e-32 110.1 0.1 1.8e-31 108.6 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|433638687|ref|YP_007284447.1| - 4.4e-08 33.3 0.2 1.5e-07 31.5 0.1 1.9 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|433638687|ref|YP_007284447.1| - 1.2e-07 31.5 0.5 1.9e-07 30.9 0.5 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.15 gi|433638687|ref|YP_007284447.1| - 7.7e-07 29.4 1.7 2.1e-06 28.0 1.7 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|433638687|ref|YP_007284447.1| - 2.6e-05 24.7 3.3 0.0004 20.9 3.3 2.4 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|433638687|ref|YP_007284447.1| - 0.00098 19.4 0.7 0.002 18.4 0.7 1.5 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 gi|433638687|ref|YP_007284447.1| - 0.0025 17.1 2.3 0.007 15.7 1.9 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain HisG PF01634.18 gi|433638687|ref|YP_007284447.1| - 0.0066 16.4 0.8 0.01 15.8 0.8 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase TrkA_N PF02254.18 gi|433638687|ref|YP_007284447.1| - 0.038 14.3 3.6 1.2 9.4 3.6 2.4 1 1 0 1 1 1 0 TrkA-N domain XdhC_C PF13478.6 gi|433638687|ref|YP_007284447.1| - 0.048 14.2 0.1 0.071 13.6 0.1 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain 2-Hacid_dh_C PF02826.19 gi|433638687|ref|YP_007284447.1| - 0.079 12.3 1.6 0.22 10.9 0.5 2.0 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|433638687|ref|YP_007284447.1| - 0.088 13.3 0.4 0.16 12.5 0.4 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding DapB_N PF01113.20 gi|433638687|ref|YP_007284447.1| - 0.12 12.5 4.6 0.71 10.0 4.4 2.2 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.24 gi|433638688|ref|YP_007284448.1| - 6.2e-31 107.4 0.0 1.3e-30 106.3 0.0 1.5 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|433638688|ref|YP_007284448.1| - 3.7e-29 102.1 0.0 6.4e-29 101.3 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DXP_reductoisom PF02670.16 gi|433638688|ref|YP_007284448.1| - 0.005 17.6 0.0 0.01 16.6 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DapB_N PF01113.20 gi|433638688|ref|YP_007284448.1| - 0.0053 16.9 0.0 0.0097 16.0 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 gi|433638688|ref|YP_007284448.1| - 0.008 16.4 0.0 0.016 15.5 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|433638688|ref|YP_007284448.1| - 0.12 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H-binding ABC_export PF16962.5 gi|433638689|ref|YP_007284449.1| - 0.05 12.1 0.2 0.055 11.9 0.2 1.0 1 0 0 1 1 1 0 Putative ABC exporter DUF308 PF03729.13 gi|433638689|ref|YP_007284449.1| - 0.13 12.6 8.5 0.54 10.6 8.5 1.8 1 1 0 1 1 1 0 Short repeat of unknown function (DUF308) DUF5362 PF17319.2 gi|433638689|ref|YP_007284449.1| - 0.25 11.2 8.1 0.13 12.1 2.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5362) DUF4229 PF14012.6 gi|433638689|ref|YP_007284449.1| - 2 8.6 5.4 3 8.0 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Ribosomal_S17e PF00833.18 gi|433638690|ref|YP_007284450.1| - 1e-13 51.3 0.1 1.2e-13 51.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal S17 HNF-1_N PF04814.13 gi|433638690|ref|YP_007284450.1| - 0.049 14.3 0.0 0.052 14.2 0.0 1.1 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus DUF447 PF04289.12 gi|433638691|ref|YP_007284451.1| - 3e-40 137.8 0.0 3.5e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) CitG PF01874.16 gi|433638692|ref|YP_007284452.1| - 1.2e-64 218.6 4.8 1.4e-64 218.5 4.8 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Dus PF01207.17 gi|433638693|ref|YP_007284453.1| - 0.0058 15.8 0.4 0.048 12.7 0.4 1.9 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF1633 PF07794.11 gi|433638693|ref|YP_007284453.1| - 0.014 13.6 1.8 0.018 13.3 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) Radical_SAM PF04055.21 gi|433638693|ref|YP_007284453.1| - 0.11 12.9 0.1 3.6 8.0 0.0 2.1 1 1 1 2 2 2 0 Radical SAM superfamily UPF0052 PF01933.18 gi|433638694|ref|YP_007284454.1| - 7.9e-48 163.2 0.0 1e-47 162.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 GCS PF03074.16 gi|433638695|ref|YP_007284455.1| - 0.05 13.0 0.1 2 7.7 0.0 2.1 1 1 1 2 2 2 0 Glutamate-cysteine ligase Peptidase_S8 PF00082.22 gi|433638697|ref|YP_007284457.1| - 1.7e-38 132.6 4.5 2.4e-38 132.1 4.5 1.1 1 0 0 1 1 1 1 Subtilase family HTH_IclR PF09339.10 gi|433638698|ref|YP_007284458.1| - 6.4e-05 22.7 0.0 0.00016 21.4 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4897 PF16238.5 gi|433638698|ref|YP_007284458.1| - 0.00023 21.1 0.1 0.00036 20.4 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4897) MarR_2 PF12802.7 gi|433638698|ref|YP_007284458.1| - 0.0013 18.6 0.2 0.023 14.6 0.0 2.5 3 0 0 3 3 3 1 MarR family HTH_24 PF13412.6 gi|433638698|ref|YP_007284458.1| - 0.0027 17.2 0.0 0.0052 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DprA_WH PF17782.1 gi|433638698|ref|YP_007284458.1| - 0.029 14.5 0.8 0.059 13.5 0.0 1.9 2 0 0 2 2 2 0 DprA winged helix domain HTH_5 PF01022.20 gi|433638698|ref|YP_007284458.1| - 0.076 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Lactamase_B PF00753.27 gi|433638699|ref|YP_007284459.1| - 1.5e-21 77.3 13.9 8.7e-20 71.6 12.8 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433638699|ref|YP_007284459.1| - 1.4e-06 28.0 2.9 1.4e-06 28.0 2.9 1.6 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|433638699|ref|YP_007284459.1| - 0.0003 20.3 0.0 0.00047 19.6 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433638699|ref|YP_007284459.1| - 0.0066 16.4 1.6 0.012 15.5 1.6 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain TFIID_20kDa PF03847.13 gi|433638700|ref|YP_007284460.1| - 0.056 13.9 0.1 0.077 13.5 0.1 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Sod_Fe_N PF00081.22 gi|433638701|ref|YP_007284461.1| - 8.9e-30 103.0 0.3 1.7e-29 102.1 0.3 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Sod_Fe_C PF02777.18 gi|433638701|ref|YP_007284461.1| - 2.6e-28 98.2 0.0 3.7e-28 97.7 0.0 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain NDK PF00334.19 gi|433638702|ref|YP_007284462.1| - 3.6e-52 176.0 0.0 4.1e-52 175.8 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF2285 PF10074.9 gi|433638702|ref|YP_007284462.1| - 0.1 13.3 0.0 0.2 12.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) Ribosomal_L24e PF01246.20 gi|433638703|ref|YP_007284463.1| - 2.7e-21 75.5 0.0 3.6e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L24e Ribosomal_S28e PF01200.18 gi|433638704|ref|YP_007284464.1| - 1.4e-28 98.7 0.8 1.5e-28 98.5 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|433638705|ref|YP_007284465.1| - 3.8e-25 87.4 0.0 4.4e-25 87.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|433638705|ref|YP_007284465.1| - 8.6e-06 25.6 0.0 1.2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain eRF1_3 PF03465.15 gi|433638705|ref|YP_007284465.1| - 0.031 14.7 0.0 0.053 14.0 0.0 1.5 1 1 0 1 1 1 0 eRF1 domain 3 DUF1269 PF06897.12 gi|433638705|ref|YP_007284465.1| - 0.069 13.4 1.9 8.2 6.8 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) Helicase_RecD PF05127.14 gi|433638706|ref|YP_007284466.1| - 1.6e-45 155.1 0.0 2.8e-45 154.3 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|433638706|ref|YP_007284466.1| - 3.7e-40 137.7 0.0 4.3e-25 88.5 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|433638706|ref|YP_007284466.1| - 4.2e-26 90.7 0.0 3.1e-25 87.9 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) AAA_30 PF13604.6 gi|433638706|ref|YP_007284466.1| - 0.00027 20.7 1.3 0.00072 19.3 1.3 1.7 1 0 0 1 1 1 1 AAA domain Acetyltransf_7 PF13508.7 gi|433638706|ref|YP_007284466.1| - 0.047 14.1 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain adh_short PF00106.25 gi|433638707|ref|YP_007284467.1| - 1.9e-30 105.8 0.4 2.6e-29 102.1 0.4 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|433638707|ref|YP_007284467.1| - 5.7e-22 78.4 1.8 5.1e-20 72.0 1.8 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|433638707|ref|YP_007284467.1| - 2.5e-08 34.1 0.2 7e-05 22.8 0.1 2.2 2 0 0 2 2 2 2 KR domain Epimerase PF01370.21 gi|433638707|ref|YP_007284467.1| - 1.8e-07 30.9 0.1 2.7e-07 30.3 0.1 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|433638707|ref|YP_007284467.1| - 7.6e-06 25.9 0.8 3.7e-05 23.7 0.9 1.9 2 0 0 2 2 2 1 NAD(P)H-binding F420_oxidored PF03807.17 gi|433638707|ref|YP_007284467.1| - 0.0053 17.3 0.2 0.055 14.0 0.1 2.3 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent MoCF_biosynth PF00994.24 gi|433638707|ref|YP_007284467.1| - 0.015 14.9 0.3 0.23 11.1 0.1 2.6 1 1 1 2 2 2 0 Probable molybdopterin binding domain tRNA-synt_1c PF00749.21 gi|433638709|ref|YP_007284469.1| - 2e-57 194.5 0.0 2.5e-57 194.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|433638709|ref|YP_007284469.1| - 2e-16 60.4 0.0 1.3e-15 57.7 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain polyprenyl_synt PF00348.17 gi|433638710|ref|YP_007284470.1| - 4.9e-65 219.1 0.6 6.4e-65 218.7 0.6 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase DUF2150 PF09920.9 gi|433638710|ref|YP_007284470.1| - 0.03 14.3 0.2 0.082 12.9 0.2 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2150) Phage_TAC_8 PF10666.9 gi|433638710|ref|YP_007284470.1| - 0.034 14.4 0.0 0.068 13.5 0.0 1.5 1 0 0 1 1 1 0 Phage tail assembly chaperone protein Gp14 ()A118 Lactamase_B_2 PF12706.7 gi|433638711|ref|YP_007284471.1| - 2e-10 40.6 2.5 6.7e-08 32.3 0.2 2.8 2 1 1 3 3 3 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433638711|ref|YP_007284471.1| - 1.1e-06 28.8 3.1 1.3e-06 28.6 1.4 2.1 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|433638711|ref|YP_007284471.1| - 5.3e-06 26.3 0.5 0.00018 21.3 0.1 2.7 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain DUF900 PF05990.12 gi|433638712|ref|YP_007284472.1| - 1.7e-10 40.8 0.0 2.3e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF726 PF05277.12 gi|433638712|ref|YP_007284472.1| - 0.031 13.2 0.1 0.065 12.2 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF726) AA_kinase PF00696.28 gi|433638713|ref|YP_007284473.1| - 5.3e-37 127.7 4.0 6.2e-37 127.5 4.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.26 gi|433638714|ref|YP_007284474.1| - 6.3e-15 55.2 3.3 1.1e-14 54.3 1.8 2.2 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|433638714|ref|YP_007284474.1| - 2.9e-14 53.2 1.8 1.2e-13 51.3 0.2 2.3 2 0 0 2 2 2 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|433638714|ref|YP_007284474.1| - 0.0013 18.3 1.5 0.0015 18.1 0.1 1.8 2 0 0 2 2 2 1 Galactokinase galactose-binding signature DUF2496 PF10689.9 gi|433638715|ref|YP_007284475.1| - 0.021 14.6 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2496) Ribosomal_S2 PF00318.20 gi|433638716|ref|YP_007284476.1| - 3.4e-23 82.0 0.1 9.7e-14 51.1 0.4 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Enolase_C PF00113.22 gi|433638717|ref|YP_007284477.1| - 6.4e-79 265.3 0.9 9.2e-79 264.8 0.9 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|433638717|ref|YP_007284477.1| - 8.5e-36 123.0 0.9 2.8e-35 121.3 0.3 2.2 2 1 0 2 2 2 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|433638717|ref|YP_007284477.1| - 1.1e-10 41.5 0.4 2.6e-10 40.3 0.4 1.6 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|433638717|ref|YP_007284477.1| - 7.9e-06 25.2 0.1 1.7e-05 24.1 0.1 1.5 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus RNA_pol_Rpb6 PF01192.22 gi|433638718|ref|YP_007284478.1| - 3.5e-11 42.9 0.1 4.1e-11 42.6 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 RNA_pol_N PF01194.17 gi|433638719|ref|YP_007284479.1| - 1.2e-27 95.9 0.2 1.3e-27 95.8 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Ribosomal_S9 PF00380.19 gi|433638720|ref|YP_007284480.1| - 4.6e-32 111.1 0.1 5.2e-32 110.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|433638721|ref|YP_007284481.1| - 5.1e-10 39.7 0.1 1.5e-07 31.7 0.1 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18 PF17135.4 gi|433638722|ref|YP_007284482.1| - 4.1e-07 29.6 0.0 4.5e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|433638722|ref|YP_007284482.1| - 1.1e-05 26.1 0.2 2.7e-05 24.9 0.2 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RNA_pol_A_bac PF01000.26 gi|433638723|ref|YP_007284483.1| - 6.6e-18 65.1 0.0 2.9e-17 63.0 0.0 2.0 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|433638723|ref|YP_007284483.1| - 1.2e-13 50.2 0.0 1.6e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_S11 PF00411.19 gi|433638724|ref|YP_007284484.1| - 3.5e-47 159.4 2.6 4.5e-47 159.0 2.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_L18p PF00861.22 gi|433638724|ref|YP_007284484.1| - 0.039 14.3 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast S4 PF01479.25 gi|433638725|ref|YP_007284485.1| - 8.7e-13 47.8 0.5 1.6e-12 46.9 0.5 1.5 1 0 0 1 1 1 1 S4 domain Ribosomal_S13 PF00416.22 gi|433638726|ref|YP_007284486.1| - 9.3e-41 139.2 1.2 1.2e-40 138.9 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|433638726|ref|YP_007284486.1| - 0.038 12.8 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) DUF4129 PF13559.6 gi|433638727|ref|YP_007284487.1| - 6.1e-09 36.0 4.0 1.1e-08 35.2 2.8 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF4129) TctB PF07331.11 gi|433638727|ref|YP_007284487.1| - 0.032 14.5 5.9 0.091 13.0 4.0 2.2 2 0 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family DUF2207 PF09972.9 gi|433638727|ref|YP_007284487.1| - 0.16 10.7 0.1 7.3 5.2 0.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF998 PF06197.13 gi|433638727|ref|YP_007284487.1| - 0.23 11.0 12.7 1.7 8.2 7.6 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF998) Wzy_C PF04932.15 gi|433638727|ref|YP_007284487.1| - 2.1 8.0 11.2 0.62 9.7 6.3 2.4 2 1 0 2 2 2 0 O-Antigen ligase DUF58 PF01882.18 gi|433638728|ref|YP_007284488.1| - 1.5e-19 70.0 0.3 3.9e-19 68.7 0.3 1.8 1 0 0 1 1 1 1 Protein of unknown function DUF58 DUF11 PF01345.18 gi|433638728|ref|YP_007284488.1| - 1.2e-07 31.9 1.5 4.6e-07 30.0 1.5 2.0 1 0 0 1 1 1 1 Domain of unknown function DUF11 NPCBM_assoc PF10633.9 gi|433638728|ref|YP_007284488.1| - 0.0011 19.2 1.3 0.0026 18.0 1.3 1.6 1 0 0 1 1 1 1 NPCBM-associated, NEW3 domain of alpha-galactosidase TRAP_beta PF05753.14 gi|433638728|ref|YP_007284488.1| - 0.25 10.7 0.0 0.45 9.9 0.0 1.3 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Radical_SAM PF04055.21 gi|433638730|ref|YP_007284490.1| - 2.2e-22 80.2 0.0 3.3e-22 79.6 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|433638730|ref|YP_007284490.1| - 1.5e-13 50.8 0.1 7.2e-13 48.6 0.1 2.0 1 1 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|433638730|ref|YP_007284490.1| - 1e-07 32.3 0.0 1.8e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|433638730|ref|YP_007284490.1| - 2.5e-05 24.4 0.0 5.1e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain HTH_10 PF04967.12 gi|433638731|ref|YP_007284491.1| - 1.6e-17 63.0 0.2 3.1e-17 62.1 0.2 1.5 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433638731|ref|YP_007284491.1| - 2.9e-05 24.0 6.4 4.6e-05 23.3 6.4 1.3 1 0 0 1 1 1 1 GAF and HTH_10 associated domain MarR_2 PF12802.7 gi|433638731|ref|YP_007284491.1| - 0.022 14.7 0.3 0.079 12.9 0.1 2.1 2 0 0 2 2 2 0 MarR family Tudor_3 PF18115.1 gi|433638731|ref|YP_007284491.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain RtcB PF01139.17 gi|433638733|ref|YP_007284493.1| - 3.7e-152 507.3 0.1 4.6e-152 507.0 0.1 1.1 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Archease PF01951.16 gi|433638734|ref|YP_007284494.1| - 2.5e-37 128.2 0.2 2.8e-37 128.0 0.2 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Acetyltransf_10 PF13673.7 gi|433638735|ref|YP_007284495.1| - 5.6e-15 55.4 0.0 6.5e-15 55.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638735|ref|YP_007284495.1| - 3.2e-14 53.1 0.0 4.7e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433638735|ref|YP_007284495.1| - 6e-14 52.3 0.1 7.9e-14 51.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|433638735|ref|YP_007284495.1| - 1.2e-10 41.2 0.0 2.1e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|433638735|ref|YP_007284495.1| - 0.00026 21.2 0.1 0.00038 20.6 0.1 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433638735|ref|YP_007284495.1| - 0.0027 18.4 0.0 0.0041 17.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|433638735|ref|YP_007284495.1| - 0.0078 16.4 0.1 0.013 15.7 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433638735|ref|YP_007284495.1| - 0.011 15.9 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|433638735|ref|YP_007284495.1| - 0.081 13.0 0.0 0.27 11.3 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Pfk_N PF18468.1 gi|433638735|ref|YP_007284495.1| - 0.087 13.2 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast Aldolase_II PF00596.21 gi|433638735|ref|YP_007284495.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 1 0 1 1 1 0 Class II Aldolase and Adducin N-terminal domain DNA_primase_S PF01896.19 gi|433638736|ref|YP_007284496.1| - 2.9e-25 89.3 0.0 7.1e-25 88.1 0.0 1.6 1 1 0 1 1 1 1 DNA primase small subunit Sld5 PF05916.11 gi|433638737|ref|YP_007284497.1| - 0.0048 17.3 0.4 0.0091 16.4 0.4 1.5 1 0 0 1 1 1 1 GINS complex protein TubC_N PF18563.1 gi|433638737|ref|YP_007284497.1| - 0.18 11.8 0.0 0.38 10.8 0.0 1.5 1 0 0 1 1 1 0 TubC N-terminal docking domain AhpC-TSA PF00578.21 gi|433638738|ref|YP_007284498.1| - 1.4e-33 115.5 0.0 1.6e-33 115.3 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|433638738|ref|YP_007284498.1| - 3.2e-21 75.6 0.0 3.5e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|433638738|ref|YP_007284498.1| - 2.6e-06 27.4 0.0 3.4e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 SCO1/SenC DUF899 PF05988.12 gi|433638738|ref|YP_007284498.1| - 8.1e-05 22.2 0.0 9.8e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) AAA PF00004.29 gi|433638739|ref|YP_007284499.1| - 1.6e-100 332.7 0.0 6.4e-49 165.8 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|433638739|ref|YP_007284499.1| - 9.8e-28 95.7 3.1 3e-13 49.3 0.1 2.9 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|433638739|ref|YP_007284499.1| - 3.2e-25 88.1 0.1 3.5e-24 84.8 0.1 2.7 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|433638739|ref|YP_007284499.1| - 5.4e-18 65.7 0.1 3e-09 37.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|433638739|ref|YP_007284499.1| - 3.2e-17 62.7 0.0 5.8e-09 35.9 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain CDC48_2 PF02933.17 gi|433638739|ref|YP_007284499.1| - 4.5e-16 58.4 0.2 1.1e-15 57.2 0.2 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 gi|433638739|ref|YP_007284499.1| - 2.9e-13 50.5 0.0 2.1e-05 25.0 0.0 3.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_33 PF13671.6 gi|433638739|ref|YP_007284499.1| - 3.5e-11 43.4 0.0 8.4e-05 22.8 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|433638739|ref|YP_007284499.1| - 4.2e-11 43.0 2.0 8.2e-05 22.6 0.1 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|433638739|ref|YP_007284499.1| - 7.7e-11 42.2 0.0 0.0012 18.8 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|433638739|ref|YP_007284499.1| - 2.9e-10 40.6 0.4 0.0023 18.2 0.0 3.8 2 2 1 3 3 3 2 AAA domain TIP49 PF06068.13 gi|433638739|ref|YP_007284499.1| - 8.9e-10 38.3 0.0 0.00026 20.3 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain RNA_helicase PF00910.22 gi|433638739|ref|YP_007284499.1| - 3.5e-08 33.8 0.0 0.004 17.5 0.0 2.8 2 1 0 2 2 2 2 RNA helicase AAA_25 PF13481.6 gi|433638739|ref|YP_007284499.1| - 2e-07 30.8 0.2 0.24 10.9 0.1 4.3 4 0 0 4 4 4 1 AAA domain AAA_3 PF07726.11 gi|433638739|ref|YP_007284499.1| - 4.6e-07 29.8 0.0 0.015 15.2 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|433638739|ref|YP_007284499.1| - 5.7e-07 29.1 0.4 0.02 14.3 0.1 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|433638739|ref|YP_007284499.1| - 6.3e-07 29.1 0.0 0.033 13.7 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|433638739|ref|YP_007284499.1| - 6.7e-07 29.2 0.0 0.032 14.0 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|433638739|ref|YP_007284499.1| - 2e-06 27.2 0.0 0.007 15.7 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin Sigma54_activat PF00158.26 gi|433638739|ref|YP_007284499.1| - 2.6e-06 27.3 0.1 0.06 13.0 0.0 3.3 2 2 0 2 2 2 2 Sigma-54 interaction domain ABC_tran PF00005.27 gi|433638739|ref|YP_007284499.1| - 4e-06 27.4 0.0 0.11 13.0 0.0 2.7 2 0 0 2 2 2 2 ABC transporter AAA_28 PF13521.6 gi|433638739|ref|YP_007284499.1| - 4.7e-06 27.0 0.0 0.045 14.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|433638739|ref|YP_007284499.1| - 5.3e-06 25.9 1.2 0.35 10.2 0.1 3.6 2 1 1 3 3 3 2 KaiC AAA_18 PF13238.6 gi|433638739|ref|YP_007284499.1| - 8.5e-06 26.3 0.0 0.19 12.3 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_11 PF13086.6 gi|433638739|ref|YP_007284499.1| - 1.6e-05 24.8 0.0 0.12 12.1 0.0 2.6 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 gi|433638739|ref|YP_007284499.1| - 1.9e-05 24.7 0.0 0.11 12.5 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|433638739|ref|YP_007284499.1| - 1.9e-05 24.5 0.1 0.2 11.3 0.1 2.8 2 1 1 3 3 2 2 AAA domain NACHT PF05729.12 gi|433638739|ref|YP_007284499.1| - 2.5e-05 24.3 0.3 1.9 8.4 0.0 4.0 3 1 2 5 5 3 2 NACHT domain NB-ARC PF00931.22 gi|433638739|ref|YP_007284499.1| - 2.6e-05 23.5 0.0 0.19 10.9 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain DUF815 PF05673.13 gi|433638739|ref|YP_007284499.1| - 3.3e-05 23.2 0.0 0.1 11.8 0.0 2.8 2 1 0 2 2 2 2 Protein of unknown function (DUF815) PhoH PF02562.16 gi|433638739|ref|YP_007284499.1| - 3.7e-05 23.3 0.0 0.16 11.4 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein AAA_30 PF13604.6 gi|433638739|ref|YP_007284499.1| - 7.4e-05 22.5 0.0 0.13 12.0 0.0 2.8 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 gi|433638739|ref|YP_007284499.1| - 8.9e-05 21.9 0.0 0.23 10.6 0.0 2.5 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 gi|433638739|ref|YP_007284499.1| - 0.00028 20.1 0.0 0.42 9.6 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ATPase_2 PF01637.18 gi|433638739|ref|YP_007284499.1| - 0.00032 20.7 0.0 0.61 10.0 0.0 3.1 2 2 0 2 2 2 1 ATPase domain predominantly from Archaea Bac_DnaA PF00308.18 gi|433638739|ref|YP_007284499.1| - 0.00035 20.5 0.0 0.64 9.8 0.0 2.6 2 1 0 2 2 2 2 Bacterial dnaA protein Sigma54_activ_2 PF14532.6 gi|433638739|ref|YP_007284499.1| - 0.00078 19.6 0.0 2.5 8.2 0.0 2.7 3 0 0 3 3 2 2 Sigma-54 interaction domain AAA_17 PF13207.6 gi|433638739|ref|YP_007284499.1| - 0.00094 19.6 0.0 2.6 8.5 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|433638739|ref|YP_007284499.1| - 0.0012 19.2 0.3 2.5 8.4 0.1 2.8 2 1 1 3 3 2 1 AAA domain Vps4_C PF09336.10 gi|433638739|ref|YP_007284499.1| - 0.003 17.5 0.2 0.51 10.4 0.0 2.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AFG1_ATPase PF03969.16 gi|433638739|ref|YP_007284499.1| - 0.0078 15.1 0.0 4.3 6.1 0.0 2.6 2 0 0 2 2 2 0 AFG1-like ATPase T2SSE PF00437.20 gi|433638739|ref|YP_007284499.1| - 0.0099 15.0 0.0 1.5 7.8 0.0 2.7 3 0 0 3 3 3 1 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|433638739|ref|YP_007284499.1| - 0.01 15.8 5.3 3.7 7.4 0.0 4.4 3 2 1 4 4 4 0 NTPase Zot PF05707.12 gi|433638739|ref|YP_007284499.1| - 0.012 15.3 0.0 0.73 9.5 0.0 3.0 3 0 0 3 3 3 0 Zonular occludens toxin (Zot) ResIII PF04851.15 gi|433638739|ref|YP_007284499.1| - 0.014 15.4 0.0 3.5 7.6 0.0 2.9 2 2 1 3 3 2 0 Type III restriction enzyme, res subunit HJURP_C PF12347.8 gi|433638739|ref|YP_007284499.1| - 0.025 14.6 0.1 0.054 13.5 0.1 1.5 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat Rad17 PF03215.15 gi|433638739|ref|YP_007284499.1| - 0.031 14.2 0.0 14 5.6 0.0 2.6 2 1 0 2 2 2 0 Rad17 P-loop domain TniB PF05621.11 gi|433638739|ref|YP_007284499.1| - 0.039 13.3 0.0 12 5.2 0.0 3.3 2 1 1 3 3 3 0 Bacterial TniB protein Cytidylate_kin PF02224.18 gi|433638739|ref|YP_007284499.1| - 0.042 13.6 0.1 10 5.8 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase Viral_helicase1 PF01443.18 gi|433638739|ref|YP_007284499.1| - 0.077 12.7 0.0 10 5.8 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Torsin PF06309.11 gi|433638739|ref|YP_007284499.1| - 0.08 13.0 0.0 5.9 7.0 0.0 2.4 2 0 0 2 2 2 0 Torsin PIF1 PF05970.14 gi|433638739|ref|YP_007284499.1| - 0.11 11.6 0.0 5.7 6.0 0.0 2.4 3 0 0 3 3 2 0 PIF1-like helicase COOH-NH2_lig PF14395.6 gi|433638739|ref|YP_007284499.1| - 0.14 11.3 1.0 15 4.7 0.0 2.7 3 0 0 3 3 3 0 Phage phiEco32-like COOH.NH2 ligase-type 2 AAA_29 PF13555.6 gi|433638739|ref|YP_007284499.1| - 0.16 11.8 0.0 30 4.5 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Bac_A_amyl_C PF18612.1 gi|433638740|ref|YP_007284500.1| - 0.066 13.0 0.1 0.091 12.6 0.1 1.3 1 0 0 1 1 1 0 Bacterial Alpha amylase C-terminal domain Abhydrolase_6 PF12697.7 gi|433638741|ref|YP_007284501.1| - 2.9e-23 83.6 6.4 3.6e-23 83.3 6.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|433638741|ref|YP_007284501.1| - 3.2e-16 59.8 0.1 4.4e-08 33.1 0.1 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|433638741|ref|YP_007284501.1| - 2.6e-14 53.1 0.1 5.9e-14 51.9 0.1 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|433638741|ref|YP_007284501.1| - 1.3e-05 25.2 0.0 2.6e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein Ndr PF03096.14 gi|433638741|ref|YP_007284501.1| - 0.0096 14.7 0.0 0.018 13.7 0.0 1.4 2 0 0 2 2 2 1 Ndr family FSH1 PF03959.13 gi|433638741|ref|YP_007284501.1| - 0.09 12.4 0.1 0.19 11.4 0.0 1.5 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Pantoate_transf PF02548.15 gi|433638742|ref|YP_007284502.1| - 3.4e-105 351.1 1.6 3.8e-105 350.9 1.6 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|433638742|ref|YP_007284502.1| - 1.2e-05 24.9 1.7 1.7e-05 24.4 0.7 1.7 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase Acyl-CoA_dh_1 PF00441.24 gi|433638744|ref|YP_007284504.1| - 2.2e-48 164.3 6.2 4.1e-48 163.4 6.2 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433638744|ref|YP_007284504.1| - 9.3e-32 110.0 0.5 2e-31 108.9 0.1 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433638744|ref|YP_007284504.1| - 2.5e-26 91.7 0.0 5.5e-26 90.6 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|433638744|ref|YP_007284504.1| - 2.5e-21 76.4 9.7 6.2e-21 75.1 9.7 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|433638744|ref|YP_007284504.1| - 0.12 12.9 0.0 0.29 11.7 0.0 1.6 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal ABATE PF07336.11 gi|433638744|ref|YP_007284504.1| - 6.9 7.4 11.3 0.25 12.0 2.1 2.6 2 1 0 2 2 2 0 Putative stress-induced transcription regulator Hydrolase_3 PF08282.12 gi|433638745|ref|YP_007284505.1| - 1.2e-09 38.3 0.0 9e-05 22.3 0.0 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433638745|ref|YP_007284505.1| - 0.011 16.0 0.1 0.034 14.4 0.1 1.9 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|433638745|ref|YP_007284505.1| - 0.11 12.0 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase GTP-bdg_N PF13167.6 gi|433638746|ref|YP_007284506.1| - 6.2e-21 74.9 0.0 1.4e-20 73.8 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|433638746|ref|YP_007284506.1| - 1.1e-17 64.2 0.0 2.1e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|433638746|ref|YP_007284506.1| - 2.8e-15 56.7 8.4 2.8e-15 56.7 8.4 1.8 2 0 0 2 2 1 1 GTP-binding GTPase Middle Region GTP_EFTU PF00009.27 gi|433638746|ref|YP_007284506.1| - 2.6e-09 36.9 0.0 8e-09 35.3 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|433638746|ref|YP_007284506.1| - 3.1e-08 33.7 0.0 0.0022 17.9 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase cobW PF02492.19 gi|433638746|ref|YP_007284506.1| - 4.9e-06 26.2 0.2 0.00092 18.8 0.0 2.3 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1_Xtn PF16897.5 gi|433638746|ref|YP_007284506.1| - 4.6e-05 23.4 0.0 8.4e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|433638746|ref|YP_007284506.1| - 0.00079 19.0 0.0 0.72 9.4 0.0 2.6 3 0 0 3 3 2 2 Ferrous iron transport protein B MnmE_helical PF12631.7 gi|433638746|ref|YP_007284506.1| - 0.01 16.0 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 0 MnmE helical domain AAA_18 PF13238.6 gi|433638746|ref|YP_007284506.1| - 0.015 15.8 0.0 0.085 13.4 0.0 2.4 1 1 0 1 1 1 0 AAA domain Arf PF00025.21 gi|433638746|ref|YP_007284506.1| - 0.016 14.7 0.0 4.3 6.7 0.0 2.4 2 0 0 2 2 2 0 ADP-ribosylation factor family Roc PF08477.13 gi|433638746|ref|YP_007284506.1| - 0.054 13.7 0.0 15 5.8 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 gi|433638746|ref|YP_007284506.1| - 0.08 13.3 3.6 0.059 13.8 0.5 2.3 1 1 1 2 2 2 0 AAA ATPase domain MCU PF04678.13 gi|433638746|ref|YP_007284506.1| - 0.083 13.0 1.1 1.5 8.9 1.1 2.2 1 1 0 1 1 1 0 Mitochondrial calcium uniporter AAA_14 PF13173.6 gi|433638746|ref|YP_007284506.1| - 0.099 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|433638746|ref|YP_007284506.1| - 0.11 13.0 0.0 0.26 11.8 0.0 1.8 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|433638746|ref|YP_007284506.1| - 0.12 12.8 0.3 23 5.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain Trans_reg_C PF00486.28 gi|433638746|ref|YP_007284506.1| - 0.13 12.4 0.5 14 5.8 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal AAA_22 PF13401.6 gi|433638746|ref|YP_007284506.1| - 0.13 12.5 0.0 0.3 11.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain FlxA PF14282.6 gi|433638746|ref|YP_007284506.1| - 1.5 8.9 5.1 3.3 7.8 5.1 1.6 1 1 0 1 1 1 0 FlxA-like protein SBDS PF01172.18 gi|433638747|ref|YP_007284507.1| - 8e-20 70.7 0.0 1.1e-19 70.2 0.0 1.2 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|433638747|ref|YP_007284507.1| - 3.9e-17 62.3 0.0 1.1e-16 60.9 0.0 1.7 2 0 0 2 2 2 1 SBDS protein C-terminal domain Proteasome PF00227.26 gi|433638748|ref|YP_007284508.1| - 4.8e-56 189.3 0.0 6e-56 189.0 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|433638748|ref|YP_007284508.1| - 8.5e-14 50.9 0.1 1.5e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature RNase_P_Rpp14 PF01900.19 gi|433638749|ref|YP_007284509.1| - 8.5e-18 64.5 0.0 1.1e-17 64.1 0.0 1.2 1 0 0 1 1 1 1 Rpp14/Pop5 family Methyltransf_25 PF13649.6 gi|433638750|ref|YP_007284510.1| - 4.4e-16 59.4 0.0 7.2e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638750|ref|YP_007284510.1| - 3e-11 43.3 0.0 4.7e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638750|ref|YP_007284510.1| - 3.3e-10 40.5 0.0 6.6e-10 39.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638750|ref|YP_007284510.1| - 6.9e-08 33.1 0.0 1.2e-07 32.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638750|ref|YP_007284510.1| - 6.4e-07 29.4 0.0 1.1e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433638750|ref|YP_007284510.1| - 7.3e-06 25.6 0.0 1.1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|433638750|ref|YP_007284510.1| - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 gi|433638750|ref|YP_007284510.1| - 0.00055 19.4 0.1 0.00076 19.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|433638750|ref|YP_007284510.1| - 0.0031 17.5 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|433638750|ref|YP_007284510.1| - 0.015 15.3 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DREV PF05219.12 gi|433638750|ref|YP_007284510.1| - 0.02 14.0 0.0 0.064 12.3 0.0 1.7 2 0 0 2 2 2 0 DREV methyltransferase tRNA_U5-meth_tr PF05958.11 gi|433638750|ref|YP_007284510.1| - 0.041 12.9 0.0 0.054 12.5 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase RrnaAD PF00398.20 gi|433638750|ref|YP_007284510.1| - 0.059 12.4 0.0 0.082 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|433638750|ref|YP_007284510.1| - 0.092 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF4459 PF14673.6 gi|433638750|ref|YP_007284510.1| - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) RNase_P_p30 PF01876.16 gi|433638751|ref|YP_007284511.1| - 3.1e-29 102.0 0.0 4.5e-29 101.5 0.0 1.3 1 1 0 1 1 1 1 RNase P subunit p30 Peptidase_M78 PF06114.13 gi|433638754|ref|YP_007284514.1| - 0.08 12.9 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 IrrE N-terminal-like domain SHMT PF00464.19 gi|433638755|ref|YP_007284515.1| - 5.1e-151 502.8 0.1 6.2e-151 502.5 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 gi|433638755|ref|YP_007284515.1| - 1.9e-07 30.7 0.0 5.1e-05 22.7 0.0 2.1 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|433638755|ref|YP_007284515.1| - 2.7e-05 23.5 0.0 5.6e-05 22.5 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II THF_DHG_CYH_C PF02882.19 gi|433638757|ref|YP_007284517.1| - 8.8e-68 226.6 1.5 1.2e-67 226.2 1.5 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|433638757|ref|YP_007284517.1| - 2.2e-36 124.6 0.0 3.6e-36 124.0 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Glyco_trans_1_4 PF13692.6 gi|433638757|ref|YP_007284517.1| - 0.0032 17.9 0.1 0.0096 16.4 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 AlaDh_PNT_C PF01262.21 gi|433638757|ref|YP_007284517.1| - 0.032 13.5 1.3 0.052 12.8 1.3 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Glyoxalase PF00903.25 gi|433638758|ref|YP_007284518.1| - 4e-12 46.5 0.5 5.8e-12 45.9 0.1 1.4 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|433638758|ref|YP_007284518.1| - 1.5e-05 25.2 0.0 2.5e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433638758|ref|YP_007284518.1| - 0.06 14.2 0.0 0.12 13.1 0.0 1.6 1 0 0 1 1 1 0 Glyoxalase-like domain HypA PF01155.19 gi|433638759|ref|YP_007284519.1| - 0.016 15.2 0.5 0.026 14.6 0.5 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|433638759|ref|YP_007284519.1| - 0.058 13.4 0.4 0.11 12.5 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon DUF2752 PF10825.8 gi|433638759|ref|YP_007284519.1| - 0.062 13.4 0.3 0.062 13.4 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Zn-ribbon_8 PF09723.10 gi|433638759|ref|YP_007284519.1| - 0.074 13.2 1.2 0.14 12.3 1.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Zn_Tnp_IS91 PF14319.6 gi|433638759|ref|YP_007284519.1| - 0.081 13.0 0.4 0.16 12.0 0.4 1.4 1 0 0 1 1 1 0 Transposase zinc-binding domain TF_Zn_Ribbon PF08271.12 gi|433638759|ref|YP_007284519.1| - 0.1 12.1 3.9 0.3 10.6 3.5 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zf-IS66 PF13005.7 gi|433638759|ref|YP_007284519.1| - 0.56 10.7 4.2 1.4 9.4 0.2 2.5 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 UPF0547 PF10571.9 gi|433638759|ref|YP_007284519.1| - 1.1 9.4 5.1 1.6 8.9 0.3 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-tcix PF14952.6 gi|433638759|ref|YP_007284519.1| - 3.5 7.3 5.7 1.1 8.9 0.5 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding PadR PF03551.14 gi|433638762|ref|YP_007284522.1| - 9.5e-18 63.9 0.9 1.2e-17 63.6 0.9 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF1495 PF07381.11 gi|433638762|ref|YP_007284522.1| - 0.0035 17.1 0.0 0.0055 16.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_45 PF14947.6 gi|433638762|ref|YP_007284522.1| - 0.0072 16.3 0.0 0.0099 15.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|433638762|ref|YP_007284522.1| - 0.0096 16.4 0.2 0.012 16.1 0.2 1.3 1 1 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|433638762|ref|YP_007284522.1| - 0.039 13.9 0.1 2.6 8.0 0.0 2.3 2 0 0 2 2 2 0 MarR family DUF4364 PF14277.6 gi|433638762|ref|YP_007284522.1| - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) HTH_34 PF13601.6 gi|433638762|ref|YP_007284522.1| - 0.12 12.5 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Aminotran_3 PF00202.21 gi|433638763|ref|YP_007284523.1| - 4.9e-76 256.0 0.0 3.8e-75 253.1 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-III HhH-GPD PF00730.25 gi|433638765|ref|YP_007284525.1| - 1.7e-15 57.4 0.0 2.7e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|433638765|ref|YP_007284525.1| - 7.2e-08 31.9 0.0 1.7e-07 30.7 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif Mso1_Sec1_bdg PF14475.6 gi|433638765|ref|YP_007284525.1| - 0.13 11.9 0.2 1.2 8.8 0.0 2.4 2 0 0 2 2 2 0 Sec1-binding region of Mso1 N6_N4_Mtase PF01555.18 gi|433638768|ref|YP_007284528.1| - 1.4e-31 110.0 0.0 1.7e-31 109.7 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_11 PF08241.12 gi|433638768|ref|YP_007284528.1| - 0.018 15.7 0.1 25 5.6 0.0 3.2 3 0 0 3 3 3 0 Methyltransferase domain UPF0020 PF01170.18 gi|433638768|ref|YP_007284528.1| - 0.037 13.7 0.0 9.8 5.8 0.0 2.3 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|433638768|ref|YP_007284528.1| - 0.076 12.7 0.0 1.2 8.8 0.0 2.5 3 0 0 3 3 3 0 Conserved hypothetical protein 95 Acetyltransf_1 PF00583.25 gi|433638769|ref|YP_007284529.1| - 1.5e-13 51.0 0.2 2.9e-13 50.1 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|433638769|ref|YP_007284529.1| - 2.9e-11 43.8 0.0 3.8e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638769|ref|YP_007284529.1| - 8.1e-08 32.6 0.0 1.8e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433638769|ref|YP_007284529.1| - 8.2e-07 29.8 0.1 1.2e-06 29.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433638769|ref|YP_007284529.1| - 2.2e-05 24.4 0.0 5.6e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433638769|ref|YP_007284529.1| - 0.00011 22.2 0.0 0.00028 21.0 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain HTH_20 PF12840.7 gi|433638769|ref|YP_007284529.1| - 0.00029 20.8 0.0 0.00065 19.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Acetyltransf_CG PF14542.6 gi|433638769|ref|YP_007284529.1| - 0.027 14.6 0.1 0.075 13.2 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase LexA_DNA_bind PF01726.16 gi|433638769|ref|YP_007284529.1| - 0.095 12.5 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain MMR_HSR1_C PF08438.10 gi|433638770|ref|YP_007284530.1| - 4.4e-28 98.1 0.0 6.9e-28 97.5 0.0 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|433638770|ref|YP_007284530.1| - 2.5e-19 69.4 0.0 1.2e-18 67.3 0.0 2.1 3 0 0 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|433638770|ref|YP_007284530.1| - 2.3e-11 43.6 0.0 3.5e-10 39.8 0.0 2.3 2 0 0 2 2 2 1 TGS domain FeoB_N PF02421.18 gi|433638770|ref|YP_007284530.1| - 3e-09 36.6 0.0 1.1e-06 28.3 0.0 3.1 3 0 0 3 3 3 1 Ferrous iron transport protein B TehB PF03848.14 gi|433638772|ref|YP_007284532.1| - 3.9e-16 59.0 0.0 4.5e-16 58.8 0.0 1.0 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_25 PF13649.6 gi|433638772|ref|YP_007284532.1| - 3.1e-15 56.7 0.0 4.6e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638772|ref|YP_007284532.1| - 7.6e-13 48.9 0.0 1.3e-12 48.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638772|ref|YP_007284532.1| - 2.6e-11 44.1 0.0 4e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433638772|ref|YP_007284532.1| - 9.3e-07 28.8 0.0 1e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433638772|ref|YP_007284532.1| - 2.7e-06 27.3 0.0 3.5e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|433638772|ref|YP_007284532.1| - 0.00018 20.9 0.0 0.00019 20.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|433638772|ref|YP_007284532.1| - 0.0024 17.4 0.0 0.0035 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 gi|433638772|ref|YP_007284532.1| - 0.0034 17.1 0.0 0.0058 16.3 0.0 1.4 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|433638772|ref|YP_007284532.1| - 0.0035 17.3 0.0 0.0047 16.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|433638772|ref|YP_007284532.1| - 0.072 13.0 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_33 PF10017.9 gi|433638772|ref|YP_007284532.1| - 0.099 11.8 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent CheR PF01739.18 gi|433638772|ref|YP_007284532.1| - 0.16 11.4 0.0 2.5 7.5 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain TPP_enzyme_N PF02776.18 gi|433638773|ref|YP_007284533.1| - 2.8e-48 163.8 1.9 1.1e-45 155.3 0.1 3.9 4 0 0 4 4 4 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|433638773|ref|YP_007284533.1| - 1.7e-26 92.8 0.0 3.7e-26 91.7 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433638773|ref|YP_007284533.1| - 2.9e-17 62.7 0.2 1e-16 60.9 0.2 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain DXP_synthase_N PF13292.6 gi|433638773|ref|YP_007284533.1| - 0.073 12.3 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase XFP_N PF09364.10 gi|433638773|ref|YP_007284533.1| - 0.19 10.5 0.0 0.28 9.9 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain FAD-oxidase_C PF02913.19 gi|433638774|ref|YP_007284534.1| - 1.2e-56 192.2 0.1 1.6e-56 191.7 0.1 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|433638774|ref|YP_007284534.1| - 2.1e-38 131.2 0.2 3.4e-38 130.5 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain eIF-1a PF01176.19 gi|433638775|ref|YP_007284535.1| - 1.4e-18 66.4 0.1 1.7e-18 66.1 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 UbiA PF01040.18 gi|433638776|ref|YP_007284536.1| - 8.6e-12 44.9 32.7 8.6e-12 44.9 32.7 2.2 1 1 1 2 2 2 1 UbiA prenyltransferase family PRA1 PF03208.19 gi|433638776|ref|YP_007284536.1| - 9.1 5.9 18.1 0.28 10.8 2.1 2.8 2 1 1 3 3 3 0 PRA1 family protein Aminotran_1_2 PF00155.21 gi|433638777|ref|YP_007284537.1| - 2.3e-58 198.1 0.0 2.6e-58 197.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|433638777|ref|YP_007284537.1| - 1.2e-13 51.2 0.3 2.1e-13 50.4 0.3 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|433638777|ref|YP_007284537.1| - 1.3e-07 31.2 0.0 2.1e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|433638777|ref|YP_007284537.1| - 3.5e-05 22.5 0.0 4.8e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|433638777|ref|YP_007284537.1| - 0.00095 18.2 0.0 0.0013 17.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_3 PF00202.21 gi|433638777|ref|YP_007284537.1| - 0.018 13.7 0.1 0.03 13.0 0.1 1.3 1 0 0 1 1 1 0 Aminotransferase class-III Amidase PF01425.21 gi|433638778|ref|YP_007284538.1| - 0.063 12.2 0.0 0.063 12.2 0.0 1.0 1 0 0 1 1 1 0 Amidase TPP_enzyme_C PF02775.21 gi|433638779|ref|YP_007284539.1| - 1.7e-30 105.9 0.4 2.5e-30 105.3 0.4 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|433638779|ref|YP_007284539.1| - 9.4e-17 60.9 0.5 1.9e-16 60.0 0.5 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DDE_Tnp_IS66_C PF13817.6 gi|433638779|ref|YP_007284539.1| - 0.077 13.2 0.8 0.12 12.6 0.3 1.6 2 0 0 2 2 2 0 IS66 C-terminal element POR_N PF01855.19 gi|433638780|ref|YP_007284540.1| - 6.4e-58 196.2 0.1 9.7e-58 195.6 0.1 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|433638780|ref|YP_007284540.1| - 8.1e-40 136.8 0.2 1.5e-39 135.9 0.2 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.18 gi|433638780|ref|YP_007284540.1| - 6.7e-05 22.6 0.1 0.00013 21.7 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFOR_II PF17147.4 gi|433638780|ref|YP_007284540.1| - 0.0034 17.7 0.0 0.0073 16.6 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|433638780|ref|YP_007284540.1| - 0.009 15.9 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain FAD_binding_6 PF00970.24 gi|433638781|ref|YP_007284541.1| - 9.4e-12 45.2 0.0 1.3e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain FAD_binding_9 PF08021.11 gi|433638781|ref|YP_007284541.1| - 0.082 13.1 0.2 0.16 12.2 0.0 1.6 2 0 0 2 2 2 0 Siderophore-interacting FAD-binding domain SLBB PF10531.9 gi|433638781|ref|YP_007284541.1| - 0.11 12.4 0.2 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 SLBB domain Glyoxalase_4 PF13669.6 gi|433638782|ref|YP_007284542.1| - 2.6e-18 66.3 0.1 3.1e-18 66.0 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|433638782|ref|YP_007284542.1| - 7.4e-09 36.0 0.6 8.4e-09 35.8 0.6 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|433638782|ref|YP_007284542.1| - 4.5e-08 33.4 0.2 5.2e-08 33.1 0.2 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433638782|ref|YP_007284542.1| - 0.0048 17.7 0.1 0.006 17.4 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_5 PF14696.6 gi|433638782|ref|YP_007284542.1| - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal MM_CoA_mutase PF01642.22 gi|433638783|ref|YP_007284543.1| - 1.8e-226 752.6 3.0 2.2e-226 752.4 3.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Acetyltransf_1 PF00583.25 gi|433638785|ref|YP_007284545.1| - 4.6e-07 30.1 0.0 6.5e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|433638785|ref|YP_007284545.1| - 0.00046 20.9 0.0 0.00068 20.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638785|ref|YP_007284545.1| - 0.0011 19.4 0.0 0.0015 18.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433638785|ref|YP_007284545.1| - 0.0015 18.4 0.0 0.0023 17.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|433638785|ref|YP_007284545.1| - 0.0017 18.5 0.0 0.0041 17.2 0.0 1.6 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase AMP-binding PF00501.28 gi|433638786|ref|YP_007284546.1| - 4.8e-71 239.6 0.0 6.7e-71 239.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433638786|ref|YP_007284546.1| - 1.3e-23 83.8 0.1 2.2e-23 83.0 0.1 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|433638786|ref|YP_007284546.1| - 5.4e-08 32.6 0.1 5.4e-08 32.6 0.1 3.4 4 0 0 4 4 4 1 Acetyl-coenzyme A synthetase N-terminus UPF0016 PF01169.19 gi|433638787|ref|YP_007284547.1| - 0.054 13.8 9.2 0.1 12.9 9.2 1.6 1 1 0 1 1 1 0 Uncharacterized protein family UPF0016 DUF892 PF05974.12 gi|433638789|ref|YP_007284549.1| - 1.9e-28 99.5 3.5 2.2e-28 99.3 3.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) AMP-binding PF00501.28 gi|433638790|ref|YP_007284550.1| - 0.035 12.7 0.0 0.12 11.0 0.0 1.7 1 1 1 2 2 2 0 AMP-binding enzyme DnaJ_C PF01556.18 gi|433638791|ref|YP_007284551.1| - 8e-42 142.8 0.0 1.1e-41 142.4 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|433638791|ref|YP_007284551.1| - 5.5e-25 87.3 3.5 9.5e-25 86.5 3.5 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|433638791|ref|YP_007284551.1| - 4.3e-13 49.4 17.5 7.7e-13 48.6 17.5 1.4 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|433638791|ref|YP_007284551.1| - 0.00019 21.4 16.1 0.0036 17.2 6.1 2.5 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein DUF5351 PF17302.2 gi|433638791|ref|YP_007284551.1| - 0.97 9.7 25.1 1.3 9.3 1.2 4.5 4 0 0 4 4 4 0 Family of unknown function (DUF5351) Cytochrom_c3_2 PF14537.6 gi|433638791|ref|YP_007284551.1| - 1.9 9.0 6.1 4.8 7.7 6.1 1.7 1 0 0 1 1 1 0 Cytochrome c3 DZR PF12773.7 gi|433638791|ref|YP_007284551.1| - 3.2 7.9 12.2 8.7 6.5 12.3 1.7 1 1 0 1 1 1 0 Double zinc ribbon TackOD1 PF18551.1 gi|433638791|ref|YP_007284551.1| - 3.3 7.3 9.0 1.9 8.1 1.5 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HypA PF01155.19 gi|433638791|ref|YP_007284551.1| - 4.1 7.5 13.5 5.8 7.0 3.3 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2171 PF09939.9 gi|433638792|ref|YP_007284552.1| - 0.00015 21.9 3.0 0.0018 18.5 3.0 2.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2171) PRC PF05239.16 gi|433638792|ref|YP_007284552.1| - 0.0046 17.0 1.0 0.017 15.2 1.0 2.0 1 0 0 1 1 1 1 PRC-barrel domain HSP70 PF00012.20 gi|433638793|ref|YP_007284553.1| - 2.8e-240 798.6 15.8 4.3e-238 791.4 15.8 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|433638793|ref|YP_007284553.1| - 1.7e-18 66.6 2.3 2.2e-18 66.2 0.1 2.2 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 gi|433638793|ref|YP_007284553.1| - 0.0019 18.0 0.0 0.0046 16.7 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain TBCA PF02970.16 gi|433638793|ref|YP_007284553.1| - 0.0049 17.2 8.0 0.0049 17.2 8.0 2.6 2 0 0 2 2 2 1 Tubulin binding cofactor A StbA PF06406.11 gi|433638793|ref|YP_007284553.1| - 0.024 13.9 0.0 0.076 12.2 0.0 1.8 2 0 0 2 2 2 0 StbA protein TraF_2 PF13729.6 gi|433638793|ref|YP_007284553.1| - 0.042 13.2 5.1 0.1 11.9 5.1 1.7 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein IFT57 PF10498.9 gi|433638793|ref|YP_007284553.1| - 0.09 11.7 6.8 0.21 10.5 6.8 1.7 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 PapD_N PF00345.20 gi|433638793|ref|YP_007284553.1| - 0.14 12.1 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain PhyH PF05721.13 gi|433638793|ref|YP_007284553.1| - 0.35 11.1 3.2 1.4 9.1 1.1 2.4 2 0 0 2 2 2 0 Phytanoyl-CoA dioxygenase (PhyH) HMMR_N PF15905.5 gi|433638793|ref|YP_007284553.1| - 0.37 10.2 7.5 0.69 9.3 7.5 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DotU PF09850.9 gi|433638793|ref|YP_007284553.1| - 0.51 10.0 2.4 10 5.8 0.9 2.5 2 0 0 2 2 2 0 Type VI secretion system protein DotU Ribosomal_S30AE PF02482.19 gi|433638793|ref|YP_007284553.1| - 0.63 10.9 4.7 1.6 9.6 3.1 2.5 2 1 0 2 2 2 0 Sigma 54 modulation protein / S30EA ribosomal protein FlaC_arch PF05377.11 gi|433638793|ref|YP_007284553.1| - 1.1 9.7 3.9 1.2 9.6 0.2 3.1 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 gi|433638793|ref|YP_007284553.1| - 5 6.1 5.1 3.4 6.7 1.6 2.1 2 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 gi|433638794|ref|YP_007284554.1| - 1.8e-42 144.8 5.5 1.8e-42 144.8 5.5 2.3 1 1 0 2 2 2 1 GrpE HOOK PF05622.12 gi|433638794|ref|YP_007284554.1| - 9.2e-07 27.4 14.3 1.4e-06 26.8 14.3 1.2 1 0 0 1 1 1 1 HOOK protein MPS2 PF17060.5 gi|433638794|ref|YP_007284554.1| - 5.2e-05 22.7 6.1 8e-05 22.1 6.1 1.2 1 0 0 1 1 1 1 Monopolar spindle protein 2 SlyX PF04102.12 gi|433638794|ref|YP_007284554.1| - 0.00022 21.8 15.7 0.0022 18.6 6.3 3.8 1 1 1 2 2 2 1 SlyX TMF_DNA_bd PF12329.8 gi|433638794|ref|YP_007284554.1| - 0.00024 21.0 3.5 0.00024 21.0 3.5 2.8 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding MAD PF05557.13 gi|433638794|ref|YP_007284554.1| - 0.00041 18.9 11.5 0.00069 18.1 11.5 1.3 1 0 0 1 1 1 1 Mitotic checkpoint protein Spc7 PF08317.11 gi|433638794|ref|YP_007284554.1| - 0.00064 18.7 14.5 0.0011 17.9 14.5 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein FPP PF05911.11 gi|433638794|ref|YP_007284554.1| - 0.0024 16.2 6.6 0.0041 15.4 6.6 1.3 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil Atg14 PF10186.9 gi|433638794|ref|YP_007284554.1| - 0.0028 16.8 7.2 0.0042 16.2 7.2 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 gi|433638794|ref|YP_007284554.1| - 0.0037 16.9 5.6 0.0055 16.3 5.6 1.3 1 0 0 1 1 1 1 Exonuclease VII, large subunit AAA_13 PF13166.6 gi|433638794|ref|YP_007284554.1| - 0.0059 15.3 4.9 0.01 14.5 4.9 1.4 1 0 0 1 1 1 1 AAA domain TMPIT PF07851.13 gi|433638794|ref|YP_007284554.1| - 0.011 15.0 2.9 0.016 14.5 2.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein CENP-F_leu_zip PF10473.9 gi|433638794|ref|YP_007284554.1| - 0.011 15.7 16.4 0.02 14.9 16.4 1.4 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CCDC144C PF14915.6 gi|433638794|ref|YP_007284554.1| - 0.013 14.7 11.7 0.018 14.1 11.7 1.2 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region DUF948 PF06103.11 gi|433638794|ref|YP_007284554.1| - 0.014 15.7 5.8 2.4 8.5 1.6 3.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Snapin_Pallidin PF14712.6 gi|433638794|ref|YP_007284554.1| - 0.015 15.7 8.2 0.036 14.5 0.3 2.7 1 1 1 2 2 2 0 Snapin/Pallidin Herpes_UL6 PF01763.16 gi|433638794|ref|YP_007284554.1| - 0.018 13.6 3.3 0.026 13.1 3.3 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like Med9 PF07544.13 gi|433638794|ref|YP_007284554.1| - 0.022 14.8 7.6 1.5 8.9 0.1 3.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 GAS PF13851.6 gi|433638794|ref|YP_007284554.1| - 0.045 13.1 14.5 0.016 14.6 9.4 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.11 gi|433638794|ref|YP_007284554.1| - 0.048 14.0 7.7 0.14 12.6 2.6 3.0 1 1 0 2 2 2 0 Flagella accessory protein C (FlaC) ADIP PF11559.8 gi|433638794|ref|YP_007284554.1| - 0.066 13.3 17.4 0.15 12.1 14.7 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding FliJ PF02050.16 gi|433638794|ref|YP_007284554.1| - 0.085 13.1 14.2 0.11 12.7 9.8 2.2 1 1 1 2 2 2 0 Flagellar FliJ protein DUF1664 PF07889.12 gi|433638794|ref|YP_007284554.1| - 0.087 12.9 7.5 0.26 11.3 0.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF148 PF02520.17 gi|433638794|ref|YP_007284554.1| - 0.097 12.8 3.7 0.63 10.2 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function DUF148 KxDL PF10241.9 gi|433638794|ref|YP_007284554.1| - 0.1 12.9 6.6 0.99 9.7 0.1 2.6 1 1 0 2 2 2 0 Uncharacterized conserved protein Fez1 PF06818.15 gi|433638794|ref|YP_007284554.1| - 0.15 12.5 16.2 0.19 12.2 14.8 1.9 1 1 1 2 2 2 0 Fez1 AAA_23 PF13476.6 gi|433638794|ref|YP_007284554.1| - 0.16 12.5 6.1 0.3 11.5 6.1 1.6 1 0 0 1 1 1 0 AAA domain BLOC1_2 PF10046.9 gi|433638794|ref|YP_007284554.1| - 0.18 12.1 6.2 0.33 11.3 5.0 2.0 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HIP1_clath_bdg PF16515.5 gi|433638794|ref|YP_007284554.1| - 0.2 12.3 15.1 0.63 10.7 5.0 2.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 EzrA PF06160.12 gi|433638794|ref|YP_007284554.1| - 0.2 9.8 10.4 0.35 9.0 10.4 1.3 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Allexi_40kDa PF05549.11 gi|433638794|ref|YP_007284554.1| - 0.22 11.0 2.7 0.32 10.5 2.7 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein Nsp1_C PF05064.13 gi|433638794|ref|YP_007284554.1| - 0.22 11.3 6.7 0.46 10.3 6.7 1.5 1 0 0 1 1 1 0 Nsp1-like C-terminal region DHR10 PF18595.1 gi|433638794|ref|YP_007284554.1| - 0.27 11.3 26.8 0.095 12.8 14.3 2.5 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain DUF3552 PF12072.8 gi|433638794|ref|YP_007284554.1| - 0.29 10.5 22.3 1.8 8.0 1.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Fib_alpha PF08702.10 gi|433638794|ref|YP_007284554.1| - 0.3 11.2 6.5 5.2 7.3 1.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YkyA PF10368.9 gi|433638794|ref|YP_007284554.1| - 0.37 10.5 11.5 0.62 9.7 11.5 1.3 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein FAM76 PF16046.5 gi|433638794|ref|YP_007284554.1| - 0.41 10.0 4.8 0.81 9.0 4.8 1.5 1 0 0 1 1 1 0 FAM76 protein COG2 PF06148.11 gi|433638794|ref|YP_007284554.1| - 0.59 10.2 9.3 4 7.5 3.3 2.5 1 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 TolA_bind_tri PF16331.5 gi|433638794|ref|YP_007284554.1| - 0.72 10.0 14.2 3.1 7.9 0.6 2.5 2 0 0 2 2 2 0 TolA binding protein trimerisation Prefoldin_2 PF01920.20 gi|433638794|ref|YP_007284554.1| - 0.88 9.6 14.1 0.94 9.5 7.0 3.2 1 1 2 3 3 3 0 Prefoldin subunit PI3K_P85_iSH2 PF16454.5 gi|433638794|ref|YP_007284554.1| - 1.1 8.8 11.2 8.1 6.0 0.1 2.2 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4201 PF13870.6 gi|433638794|ref|YP_007284554.1| - 1.4 8.7 12.9 0.13 12.0 4.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) DUF848 PF05852.11 gi|433638794|ref|YP_007284554.1| - 1.6 8.8 15.8 0.99 9.5 4.4 2.8 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) DUF16 PF01519.16 gi|433638794|ref|YP_007284554.1| - 1.6 9.2 10.4 2.6 8.6 4.2 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 Golgin_A5 PF09787.9 gi|433638794|ref|YP_007284554.1| - 1.8 8.0 18.3 0.59 9.5 12.3 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 Cnn_1N PF07989.11 gi|433638794|ref|YP_007284554.1| - 2 8.6 13.0 2.6 8.3 5.6 3.3 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF4200 PF13863.6 gi|433638794|ref|YP_007284554.1| - 2.1 8.8 18.0 4.9 7.6 3.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Laminin_II PF06009.12 gi|433638794|ref|YP_007284554.1| - 2.2 8.3 11.1 6.7 6.7 1.1 2.5 1 1 1 2 2 2 0 Laminin Domain II BST2 PF16716.5 gi|433638794|ref|YP_007284554.1| - 2.2 8.9 12.5 3.3 8.4 6.9 2.6 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Mod_r PF07200.13 gi|433638794|ref|YP_007284554.1| - 2.2 8.3 14.8 10 6.2 14.8 2.1 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF641 PF04859.12 gi|433638794|ref|YP_007284554.1| - 2.9 8.2 10.4 0.57 10.5 4.0 2.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) UPF0242 PF06785.11 gi|433638794|ref|YP_007284554.1| - 3.6 7.7 18.0 41 4.2 18.2 2.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Occludin_ELL PF07303.13 gi|433638794|ref|YP_007284554.1| - 4 8.2 7.7 3.6 8.4 3.8 2.3 1 1 1 2 2 2 0 Occludin homology domain XhlA PF10779.9 gi|433638794|ref|YP_007284554.1| - 5.1 7.4 9.3 4.2 7.7 5.2 2.5 1 1 2 3 3 3 0 Haemolysin XhlA DLP_helical PF18709.1 gi|433638794|ref|YP_007284554.1| - 5.3 6.2 11.2 1.5 8.0 4.1 2.4 2 1 0 3 3 2 0 Dynamin-like helical domain Seryl_tRNA_N PF02403.22 gi|433638794|ref|YP_007284554.1| - 5.3 7.3 14.4 0.31 11.3 5.2 2.7 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF812 PF05667.11 gi|433638794|ref|YP_007284554.1| - 5.4 5.8 23.3 0.25 10.2 16.6 1.9 2 1 0 2 2 1 0 Protein of unknown function (DUF812) CCDC-167 PF15188.6 gi|433638794|ref|YP_007284554.1| - 5.5 7.4 14.7 35 4.8 0.3 3.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF724 PF05266.14 gi|433638794|ref|YP_007284554.1| - 6.3 6.6 10.7 4.9 6.9 8.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Tho2 PF11262.8 gi|433638794|ref|YP_007284554.1| - 7.1 5.7 6.8 5.2 6.2 4.8 1.6 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF2570 PF10828.8 gi|433638794|ref|YP_007284554.1| - 7.5 6.4 9.3 3 7.7 5.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DUF4446 PF14584.6 gi|433638794|ref|YP_007284554.1| - 7.6 6.5 6.3 8.9 6.3 2.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) SBP_bac_8 PF13416.6 gi|433638795|ref|YP_007284555.1| - 2e-17 64.0 2.6 2.7e-17 63.5 2.6 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|433638795|ref|YP_007284555.1| - 3.7e-11 43.5 1.4 6e-11 42.8 1.4 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Phage_holin_3_6 PF07332.11 gi|433638796|ref|YP_007284556.1| - 0.028 14.5 7.0 0.042 13.9 7.0 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III BPD_transp_1 PF00528.22 gi|433638797|ref|YP_007284557.1| - 8.9e-18 64.7 20.6 8.9e-18 64.7 20.6 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|433638798|ref|YP_007284558.1| - 1.9e-18 66.9 14.3 1.9e-18 66.9 14.3 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|433638799|ref|YP_007284559.1| - 6.4e-33 114.2 0.0 1.1e-32 113.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|433638799|ref|YP_007284559.1| - 6e-09 36.0 0.2 3.3e-08 33.6 0.0 2.3 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|433638799|ref|YP_007284559.1| - 7.1e-09 35.9 0.0 0.00022 21.2 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 gi|433638799|ref|YP_007284559.1| - 4.3e-06 27.5 0.1 0.062 14.2 0.0 3.0 1 1 1 2 2 2 2 MalK OB fold domain TOBE PF03459.17 gi|433638799|ref|YP_007284559.1| - 0.00021 21.5 0.2 0.00062 20.0 0.1 1.8 2 0 0 2 2 1 1 TOBE domain SMC_N PF02463.19 gi|433638799|ref|YP_007284559.1| - 0.0007 19.1 0.0 0.011 15.2 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 gi|433638799|ref|YP_007284559.1| - 0.0058 17.2 1.9 0.72 10.5 0.0 3.1 2 1 0 2 2 2 1 CysA C-terminal regulatory domain AAA PF00004.29 gi|433638799|ref|YP_007284559.1| - 0.0067 16.9 0.0 0.071 13.5 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|433638799|ref|YP_007284559.1| - 0.011 16.1 0.0 0.022 15.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|433638799|ref|YP_007284559.1| - 0.018 15.3 0.1 0.071 13.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|433638799|ref|YP_007284559.1| - 0.034 13.8 0.0 0.22 11.2 0.0 1.9 1 1 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433638799|ref|YP_007284559.1| - 0.042 13.7 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase Rad17 PF03215.15 gi|433638799|ref|YP_007284559.1| - 0.043 13.8 0.0 0.072 13.0 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|433638799|ref|YP_007284559.1| - 0.044 14.0 0.5 0.18 12.0 0.2 2.1 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 gi|433638799|ref|YP_007284559.1| - 0.044 13.2 0.2 6 6.3 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_30 PF13604.6 gi|433638799|ref|YP_007284559.1| - 0.054 13.2 0.2 0.12 12.1 0.0 1.6 2 0 0 2 2 1 0 AAA domain DUF3756 PF12581.8 gi|433638799|ref|YP_007284559.1| - 0.059 13.3 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) RNA_helicase PF00910.22 gi|433638799|ref|YP_007284559.1| - 0.065 13.6 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_23 PF13476.6 gi|433638799|ref|YP_007284559.1| - 0.084 13.4 0.1 0.18 12.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|433638799|ref|YP_007284559.1| - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea SatD PF16264.5 gi|433638800|ref|YP_007284560.1| - 3.5e-11 43.1 0.0 5.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 SatD family (SatD) Sigma70_r3 PF04539.16 gi|433638800|ref|YP_007284560.1| - 0.00014 21.9 0.1 0.00046 20.2 0.1 1.9 1 0 0 1 1 1 1 Sigma-70 region 3 Sigma70_r4 PF04545.16 gi|433638800|ref|YP_007284560.1| - 0.00031 20.2 0.1 0.00073 19.0 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_10 PF04967.12 gi|433638800|ref|YP_007284560.1| - 0.0014 18.4 0.1 0.012 15.4 0.1 2.3 1 1 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.7 gi|433638800|ref|YP_007284560.1| - 0.0034 17.3 0.2 0.0097 15.8 0.2 1.8 1 0 0 1 1 1 1 MarR family YdaS_antitoxin PF15943.5 gi|433638800|ref|YP_007284560.1| - 0.0051 16.6 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_50 PF18024.1 gi|433638800|ref|YP_007284560.1| - 0.011 15.3 0.1 0.03 13.9 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|433638800|ref|YP_007284560.1| - 0.031 14.3 0.5 0.06 13.4 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix HTH_23 PF13384.6 gi|433638800|ref|YP_007284560.1| - 0.057 13.2 0.1 0.15 11.9 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_1 PF00126.27 gi|433638800|ref|YP_007284560.1| - 0.064 13.2 0.0 0.17 11.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_Crp_2 PF13545.6 gi|433638800|ref|YP_007284560.1| - 0.069 13.1 0.2 0.14 12.1 0.2 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|433638800|ref|YP_007284560.1| - 0.076 12.6 0.1 0.19 11.3 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Methyltranf_PUA PF13636.6 gi|433638802|ref|YP_007284562.1| - 5.7e-10 39.0 0.0 9.1e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF Methyltr_RsmB-F PF01189.17 gi|433638803|ref|YP_007284563.1| - 8.2e-51 172.5 0.0 1e-50 172.2 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|433638803|ref|YP_007284563.1| - 2.8e-05 24.5 0.0 9e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 gi|433638803|ref|YP_007284563.1| - 0.075 13.1 0.0 0.19 11.8 0.0 1.7 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 gi|433638803|ref|YP_007284563.1| - 0.086 12.6 0.0 0.14 12.0 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Aldo_ket_red PF00248.21 gi|433638804|ref|YP_007284564.1| - 2.7e-55 187.7 0.0 1.1e-43 149.5 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family RHH_1 PF01402.21 gi|433638804|ref|YP_007284564.1| - 0.23 11.4 1.3 4.7 7.3 0.6 2.7 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family DUF2070 PF09843.9 gi|433638805|ref|YP_007284565.1| - 1.2 7.4 6.4 1.5 7.1 6.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3422 PF11902.8 gi|433638805|ref|YP_007284565.1| - 1.5 7.8 3.0 2.6 7.1 3.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3422) GPHR_N PF12537.8 gi|433638805|ref|YP_007284565.1| - 4.8 7.3 6.9 2.1 8.5 3.8 2.1 2 1 0 2 2 2 0 The Golgi pH Regulator (GPHR) Family N-terminal DUF2071 PF09844.9 gi|433638806|ref|YP_007284566.1| - 3.4e-70 236.0 1.0 3.8e-70 235.8 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) ADC PF06314.11 gi|433638806|ref|YP_007284566.1| - 0.0015 18.1 0.1 0.0018 17.9 0.1 1.1 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) PPK2 PF03976.14 gi|433638806|ref|YP_007284566.1| - 0.022 14.3 1.3 0.087 12.3 0.2 1.9 2 0 0 2 2 2 0 Polyphosphate kinase 2 (PPK2) PAPS_reduct PF01507.19 gi|433638807|ref|YP_007284567.1| - 4.3e-16 59.4 0.0 2.3e-12 47.3 0.0 3.0 2 1 0 2 2 2 2 Phosphoadenosine phosphosulfate reductase family Diphthami_syn_2 PF01902.17 gi|433638807|ref|YP_007284567.1| - 0.034 13.7 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 Diphthamide synthase ATP_bind_3 PF01171.20 gi|433638807|ref|YP_007284567.1| - 0.096 12.4 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 PP-loop family DUF4203 PF13886.6 gi|433638808|ref|YP_007284568.1| - 0.0013 18.4 33.2 0.0013 18.4 33.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) Aminotran_1_2 PF00155.21 gi|433638809|ref|YP_007284569.1| - 2.5e-31 109.2 0.0 3e-31 108.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|433638809|ref|YP_007284569.1| - 1.3e-12 47.3 0.0 2.2e-12 46.5 0.0 1.3 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase DsbD PF02683.15 gi|433638812|ref|YP_007284572.1| - 0.01 15.8 0.0 0.01 15.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DctQ PF04290.12 gi|433638812|ref|YP_007284572.1| - 0.025 14.5 1.6 0.036 14.0 1.6 1.3 1 1 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component SfLAP PF11139.8 gi|433638812|ref|YP_007284572.1| - 0.064 12.7 0.0 0.066 12.6 0.0 1.1 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein Wzy_C PF04932.15 gi|433638812|ref|YP_007284572.1| - 0.15 11.7 1.6 1.2 8.8 1.6 1.9 1 1 0 1 1 1 0 O-Antigen ligase ABC2_membrane_3 PF12698.7 gi|433638812|ref|YP_007284572.1| - 0.27 10.3 4.2 0.45 9.6 4.4 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein Acetyltransf_10 PF13673.7 gi|433638813|ref|YP_007284573.1| - 2.4e-15 56.6 0.0 2.9e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433638813|ref|YP_007284573.1| - 1.8e-11 44.3 0.1 2.3e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433638813|ref|YP_007284573.1| - 4.1e-10 39.9 0.0 6.4e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433638813|ref|YP_007284573.1| - 8.6e-05 22.4 0.0 0.00017 21.5 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|433638813|ref|YP_007284573.1| - 0.0016 18.5 0.3 0.0034 17.5 0.3 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Glycos_trans_3N PF02885.17 gi|433638813|ref|YP_007284573.1| - 0.12 12.2 0.1 0.33 10.8 0.1 1.7 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain DJ-1_PfpI PF01965.24 gi|433638814|ref|YP_007284574.1| - 3.3e-47 160.4 0.1 3.6e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 gi|433638814|ref|YP_007284574.1| - 4.5e-05 23.1 0.1 0.00014 21.6 0.1 1.7 1 1 0 1 1 1 1 C-terminal domain found in long catalases zinc_ribbon_9 PF14369.6 gi|433638815|ref|YP_007284575.1| - 0.4 11.0 6.5 7 7.0 6.5 2.3 1 1 0 1 1 1 0 zinc-ribbon DUF2157 PF09925.9 gi|433638816|ref|YP_007284576.1| - 0.0053 16.6 0.3 0.0069 16.2 0.3 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2157) DUF2545 PF10810.8 gi|433638816|ref|YP_007284576.1| - 0.0058 16.8 2.3 0.052 13.7 0.4 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2545) DUF4281 PF14108.6 gi|433638816|ref|YP_007284576.1| - 0.017 15.5 0.3 0.031 14.6 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4281) CbtB PF09489.10 gi|433638816|ref|YP_007284576.1| - 0.071 13.2 2.5 4.5 7.5 0.1 2.7 3 0 0 3 3 3 0 Probable cobalt transporter subunit (CbtB) TrbC PF04956.13 gi|433638816|ref|YP_007284576.1| - 0.26 11.6 2.4 2.6 8.3 2.3 2.4 1 1 0 1 1 1 0 TrbC/VIRB2 family CPBP PF02517.16 gi|433638820|ref|YP_007284580.1| - 8.3e-13 48.5 14.1 5.9e-12 45.8 7.8 2.5 2 1 0 2 2 2 2 CPBP intramembrane metalloprotease CYYR1 PF10873.8 gi|433638820|ref|YP_007284580.1| - 0.28 11.6 2.1 0.65 10.4 2.1 1.6 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 PRA1 PF03208.19 gi|433638820|ref|YP_007284580.1| - 0.37 10.4 0.1 0.37 10.4 0.1 3.7 1 1 2 3 3 3 0 PRA1 family protein TetR_N PF00440.23 gi|433638821|ref|YP_007284581.1| - 8.4e-14 51.1 0.2 1.4e-13 50.4 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|433638821|ref|YP_007284581.1| - 3.6e-07 30.4 1.1 1.8e-06 28.2 0.5 2.1 2 1 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_C_24 PF17932.1 gi|433638821|ref|YP_007284581.1| - 0.0034 17.6 0.1 0.0088 16.3 0.0 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain HTH_20 PF12840.7 gi|433638821|ref|YP_007284581.1| - 0.0044 17.0 0.7 0.011 15.8 0.0 2.0 3 0 0 3 3 3 1 Helix-turn-helix domain TetR_C_27 PF17935.1 gi|433638821|ref|YP_007284581.1| - 0.027 14.5 0.2 0.066 13.3 0.0 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain HTH_11 PF08279.12 gi|433638821|ref|YP_007284581.1| - 0.033 14.1 0.0 0.092 12.7 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_Tnp_1_2 PF13022.6 gi|433638821|ref|YP_007284581.1| - 0.21 11.7 0.0 0.34 11.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase Glutaredoxin PF00462.24 gi|433638823|ref|YP_007284583.1| - 2.5e-15 56.4 0.0 4.3e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin DED PF01335.21 gi|433638823|ref|YP_007284583.1| - 0.077 13.3 0.0 3.1 8.1 0.0 2.2 2 0 0 2 2 2 0 Death effector domain Aldolase PF01081.19 gi|433638825|ref|YP_007284585.1| - 3e-43 147.5 3.0 3.5e-43 147.3 3.0 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase DHO_dh PF01180.21 gi|433638825|ref|YP_007284585.1| - 0.00025 20.4 9.1 0.29 10.3 1.0 3.0 1 1 2 3 3 3 3 Dihydroorotate dehydrogenase PEP_hydrolase PF09370.10 gi|433638825|ref|YP_007284585.1| - 0.015 14.5 1.0 0.64 9.2 0.1 2.2 1 1 1 2 2 2 0 Phosphoenolpyruvate hydrolase-like MR_MLE_C PF13378.6 gi|433638826|ref|YP_007284586.1| - 3.4e-57 193.6 1.1 4.8e-57 193.0 1.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|433638826|ref|YP_007284586.1| - 1.2e-13 51.2 0.1 2.7e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Pribosyltran PF00156.27 gi|433638827|ref|YP_007284587.1| - 1.2e-15 57.4 0.0 1.9e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_23 PF13384.6 gi|433638827|ref|YP_007284587.1| - 0.00035 20.3 0.0 0.00098 18.9 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 gi|433638827|ref|YP_007284587.1| - 0.0004 20.4 0.0 0.0012 18.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_11 PF08279.12 gi|433638827|ref|YP_007284587.1| - 0.012 15.5 0.1 0.045 13.7 0.1 1.9 2 0 0 2 2 2 0 HTH domain UPRTase PF14681.6 gi|433638827|ref|YP_007284587.1| - 0.022 14.2 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Sigma70_r4 PF04545.16 gi|433638827|ref|YP_007284587.1| - 0.023 14.2 0.1 0.045 13.3 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 PRTase_2 PF15609.6 gi|433638827|ref|YP_007284587.1| - 0.028 13.9 0.3 0.054 13.0 0.2 1.4 1 1 0 1 1 1 0 Phosphoribosyl transferase HTH_24 PF13412.6 gi|433638827|ref|YP_007284587.1| - 0.032 13.8 0.0 0.1 12.2 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF2802 PF10975.8 gi|433638827|ref|YP_007284587.1| - 0.045 13.9 0.2 0.095 12.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) GerE PF00196.19 gi|433638827|ref|YP_007284587.1| - 0.055 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_28 PF13518.6 gi|433638827|ref|YP_007284587.1| - 0.063 13.4 0.2 0.74 10.0 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|433638827|ref|YP_007284587.1| - 0.087 12.5 0.0 0.21 11.3 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 Crp PF00325.20 gi|433638827|ref|YP_007284587.1| - 0.11 12.2 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_38 PF13936.6 gi|433638827|ref|YP_007284587.1| - 0.11 12.2 0.0 0.31 10.8 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|433638827|ref|YP_007284587.1| - 0.12 12.5 0.1 0.27 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_Crp_2 PF13545.6 gi|433638827|ref|YP_007284587.1| - 0.14 12.1 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CENP-B_N PF04218.13 gi|433638827|ref|YP_007284587.1| - 0.27 10.9 0.5 0.46 10.2 0.0 1.6 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain HTH_20 PF12840.7 gi|433638829|ref|YP_007284589.1| - 0.0002 21.3 0.9 0.00098 19.1 0.9 2.2 1 1 0 1 1 1 1 Helix-turn-helix domain GPP34 PF05719.11 gi|433638829|ref|YP_007284589.1| - 0.0057 16.7 2.1 0.0085 16.1 1.9 1.3 1 1 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) TrmB PF01978.19 gi|433638829|ref|YP_007284589.1| - 0.0085 16.0 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|433638829|ref|YP_007284589.1| - 0.011 15.5 0.7 0.02 14.7 0.1 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain Dimerisation2 PF16864.5 gi|433638829|ref|YP_007284589.1| - 0.017 15.1 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain MarR_2 PF12802.7 gi|433638829|ref|YP_007284589.1| - 0.023 14.6 1.9 0.057 13.3 1.8 1.9 1 1 0 1 1 1 0 MarR family HTH_DeoR PF08220.12 gi|433638829|ref|YP_007284589.1| - 0.041 13.6 0.1 0.083 12.6 0.1 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain MarR PF01047.22 gi|433638829|ref|YP_007284589.1| - 0.056 13.4 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 MarR family CPSase_L_D2 PF02786.17 gi|433638830|ref|YP_007284590.1| - 6.5e-71 238.2 0.0 1.2e-70 237.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|433638830|ref|YP_007284590.1| - 3e-45 153.3 0.9 9.3e-45 151.7 0.5 2.1 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|433638830|ref|YP_007284590.1| - 8e-37 125.6 0.0 1.6e-36 124.7 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 gi|433638830|ref|YP_007284590.1| - 5e-14 51.9 6.9 1.4e-13 50.4 6.9 1.8 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|433638830|ref|YP_007284590.1| - 3.2e-08 33.3 3.2 0.0017 18.1 0.3 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like ATP-grasp PF02222.22 gi|433638830|ref|YP_007284590.1| - 2e-06 27.5 0.0 4.6e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|433638830|ref|YP_007284590.1| - 5.7e-05 23.0 0.0 0.00011 22.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dala_Dala_lig_C PF07478.13 gi|433638830|ref|YP_007284590.1| - 0.00029 20.5 0.0 0.00075 19.1 0.0 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus HlyD_3 PF13437.6 gi|433638830|ref|YP_007284590.1| - 0.0051 17.5 2.5 2 9.2 0.2 2.8 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|433638830|ref|YP_007284590.1| - 0.018 14.2 1.9 3.3 6.9 0.1 2.4 1 1 1 2 2 2 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATPgrasp_ST PF14397.6 gi|433638830|ref|YP_007284590.1| - 0.072 12.3 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp GCV_H PF01597.19 gi|433638830|ref|YP_007284590.1| - 0.078 12.9 2.8 0.14 12.0 1.9 1.9 2 0 0 2 2 1 0 Glycine cleavage H-protein Oxidored_nitro PF00148.19 gi|433638830|ref|YP_007284590.1| - 0.083 11.6 1.3 0.14 10.8 1.2 1.4 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Peptidase_M23 PF01551.22 gi|433638830|ref|YP_007284590.1| - 0.22 11.8 1.6 0.68 10.2 1.6 1.8 1 0 0 1 1 1 0 Peptidase family M23 CoA_binding_2 PF13380.6 gi|433638830|ref|YP_007284590.1| - 0.29 11.6 2.0 1.3 9.6 0.2 2.3 1 1 1 2 2 2 0 CoA binding domain Carboxyl_trans PF01039.22 gi|433638832|ref|YP_007284592.1| - 2.9e-196 652.9 0.0 3.3e-196 652.7 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|433638832|ref|YP_007284592.1| - 0.0006 19.4 0.0 0.0015 18.1 0.0 1.6 2 0 0 2 2 2 1 Malonate decarboxylase gamma subunit (MdcE) SNF PF00209.18 gi|433638833|ref|YP_007284593.1| - 7.7e-59 199.8 36.5 5.7e-35 121.0 17.5 2.0 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family Peripla_BP_6 PF13458.6 gi|433638834|ref|YP_007284594.1| - 1.1e-29 104.2 3.3 1.4e-29 103.9 3.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 gi|433638834|ref|YP_007284594.1| - 2.9e-21 76.0 0.0 3.9e-21 75.5 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region ABC_tran PF00005.27 gi|433638835|ref|YP_007284595.1| - 5.8e-31 107.8 0.0 7.7e-31 107.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638835|ref|YP_007284595.1| - 6.6e-13 49.1 0.0 5.9e-06 26.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433638835|ref|YP_007284595.1| - 0.00035 20.1 0.2 0.011 15.2 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433638835|ref|YP_007284595.1| - 0.0031 17.2 0.1 0.0066 16.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|433638835|ref|YP_007284595.1| - 0.012 15.4 0.1 0.4 10.3 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 gi|433638835|ref|YP_007284595.1| - 0.012 16.1 0.1 0.019 15.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|433638835|ref|YP_007284595.1| - 0.015 15.7 0.1 0.026 14.9 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|433638835|ref|YP_007284595.1| - 0.015 15.5 1.4 0.14 12.4 0.2 2.1 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|433638835|ref|YP_007284595.1| - 0.017 14.9 0.1 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|433638835|ref|YP_007284595.1| - 0.025 14.2 0.0 0.045 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|433638835|ref|YP_007284595.1| - 0.16 12.0 0.0 0.35 10.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_10 PF12846.7 gi|433638835|ref|YP_007284595.1| - 0.17 10.8 0.9 0.27 10.1 0.3 1.6 2 0 0 2 2 2 0 AAA-like domain NB-ARC PF00931.22 gi|433638835|ref|YP_007284595.1| - 0.17 11.0 0.4 0.24 10.5 0.4 1.2 1 0 0 1 1 1 0 NB-ARC domain Spore_IV_A PF09547.10 gi|433638835|ref|YP_007284595.1| - 0.18 10.7 0.4 0.26 10.2 0.4 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) AAA_33 PF13671.6 gi|433638835|ref|YP_007284595.1| - 0.23 11.6 0.4 0.57 10.3 0.4 1.6 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|433638836|ref|YP_007284596.1| - 5.1e-32 111.2 0.0 6.9e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433638836|ref|YP_007284596.1| - 1.7e-11 44.5 0.8 1.3e-05 25.2 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 gi|433638836|ref|YP_007284596.1| - 3.5e-09 36.4 0.1 6.9e-09 35.4 0.1 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.19 gi|433638836|ref|YP_007284596.1| - 3.4e-05 23.4 0.3 0.22 10.9 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|433638836|ref|YP_007284596.1| - 4.4e-05 24.1 0.2 7.4e-05 23.3 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433638836|ref|YP_007284596.1| - 0.00059 19.5 0.1 0.0012 18.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MukB PF04310.12 gi|433638836|ref|YP_007284596.1| - 0.034 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 gi|433638836|ref|YP_007284596.1| - 0.05 13.3 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433638836|ref|YP_007284596.1| - 0.059 13.3 0.0 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase DUF4346 PF14251.6 gi|433638836|ref|YP_007284596.1| - 0.08 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4346) AAA_27 PF13514.6 gi|433638836|ref|YP_007284596.1| - 0.11 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|433638836|ref|YP_007284596.1| - 0.14 12.3 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|433638836|ref|YP_007284596.1| - 0.14 11.4 0.0 0.29 10.4 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin BPD_transp_2 PF02653.16 gi|433638837|ref|YP_007284597.1| - 1e-42 146.1 26.7 1e-42 146.1 26.7 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|433638838|ref|YP_007284598.1| - 2.7e-38 131.7 41.2 2.7e-38 131.7 41.2 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component adh_short_C2 PF13561.6 gi|433638839|ref|YP_007284599.1| - 1.2e-41 142.8 0.1 2.6e-41 141.7 0.1 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433638839|ref|YP_007284599.1| - 6.4e-38 130.2 0.0 7.7e-38 129.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 gi|433638839|ref|YP_007284599.1| - 1.4e-09 37.8 0.0 5.6e-09 35.8 0.0 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 gi|433638839|ref|YP_007284599.1| - 4e-09 36.7 0.0 6.7e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 gi|433638839|ref|YP_007284599.1| - 2e-06 27.5 0.0 3.1e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|433638839|ref|YP_007284599.1| - 0.0016 17.5 0.0 0.0022 17.1 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|433638839|ref|YP_007284599.1| - 0.014 14.5 0.0 0.019 14.1 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|433638839|ref|YP_007284599.1| - 0.055 12.6 0.0 0.074 12.2 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|433638839|ref|YP_007284599.1| - 0.055 13.3 0.1 0.094 12.6 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H-binding SpoVR PF04293.13 gi|433638841|ref|YP_007284601.1| - 3e-88 296.3 0.0 7.3e-73 245.6 0.0 2.1 2 0 0 2 2 2 2 SpoVR like protein DUF2859 PF11072.8 gi|433638841|ref|YP_007284601.1| - 0.042 13.6 0.0 3.2 7.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2859) DUF444 PF04285.12 gi|433638842|ref|YP_007284602.1| - 1.3e-123 413.2 0.0 1.5e-123 413.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) Tautomerase_2 PF14552.6 gi|433638842|ref|YP_007284602.1| - 0.0018 18.3 0.1 0.31 11.2 0.0 2.6 2 0 0 2 2 2 2 Tautomerase enzyme DUF1194 PF06707.11 gi|433638842|ref|YP_007284602.1| - 0.064 12.4 0.2 0.7 9.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1194) PrkA PF06798.12 gi|433638843|ref|YP_007284603.1| - 7.1e-45 153.6 0.0 2.1e-44 152.1 0.0 1.7 2 0 0 2 2 2 1 PrkA serine protein kinase C-terminal domain AAA_PrkA PF08298.11 gi|433638843|ref|YP_007284603.1| - 9.1e-10 38.0 0.0 5.8e-07 28.8 0.0 3.3 2 1 0 2 2 2 2 PrkA AAA domain RNA_helicase PF00910.22 gi|433638843|ref|YP_007284603.1| - 0.064 13.6 0.0 4.2 7.8 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA_2 PF07724.14 gi|433638843|ref|YP_007284603.1| - 0.11 12.6 0.1 1.2 9.2 0.1 2.2 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) PrkA PF06798.12 gi|433638844|ref|YP_007284604.1| - 2e-70 237.4 9.4 2e-70 237.4 9.4 2.6 3 0 0 3 3 3 1 PrkA serine protein kinase C-terminal domain AAA_PrkA PF08298.11 gi|433638844|ref|YP_007284604.1| - 1.3e-64 218.4 0.0 2.1e-64 217.7 0.0 1.2 1 0 0 1 1 1 1 PrkA AAA domain AAA_18 PF13238.6 gi|433638844|ref|YP_007284604.1| - 0.093 13.3 2.7 0.21 12.1 0.0 2.9 2 1 0 2 2 2 0 AAA domain UPF0179 PF03684.13 gi|433638846|ref|YP_007284606.1| - 8.4e-45 152.1 0.0 9.3e-45 152.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DDE_Tnp_1_6 PF13751.6 gi|433638846|ref|YP_007284606.1| - 0.0032 17.7 0.3 0.0057 16.9 0.1 1.5 2 0 0 2 2 2 1 Transposase DDE domain CSD PF00313.22 gi|433638848|ref|YP_007284608.1| - 1.5e-18 66.4 0.1 1.7e-18 66.2 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|433638848|ref|YP_007284608.1| - 0.038 13.7 3.1 0.055 13.2 3.1 1.3 1 0 0 1 1 1 0 Ribonuclease B OB domain S1-like PF14444.6 gi|433638848|ref|YP_007284608.1| - 0.087 12.8 0.4 0.12 12.4 0.4 1.4 1 1 0 1 1 1 0 S1-like FAD_binding_3 PF01494.19 gi|433638850|ref|YP_007284610.1| - 4.2e-11 42.7 2.5 1.5e-10 40.9 2.5 1.9 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|433638850|ref|YP_007284610.1| - 1.1e-05 25.0 0.2 1.8e-05 24.3 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|433638850|ref|YP_007284610.1| - 4e-05 23.0 0.1 7.6e-05 22.1 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|433638850|ref|YP_007284610.1| - 6e-05 22.4 3.4 0.0028 16.9 1.1 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|433638850|ref|YP_007284610.1| - 6.3e-05 22.7 4.2 0.0011 18.6 1.0 2.3 1 1 1 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|433638850|ref|YP_007284610.1| - 0.00016 20.9 4.5 0.00048 19.3 2.0 2.2 1 1 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|433638850|ref|YP_007284610.1| - 0.00016 21.8 2.6 0.00037 20.7 0.7 2.6 2 1 1 3 3 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|433638850|ref|YP_007284610.1| - 0.0042 15.8 0.8 0.0069 15.1 0.8 1.3 1 0 0 1 1 1 1 HI0933-like protein ETF_QO PF05187.13 gi|433638850|ref|YP_007284610.1| - 0.018 15.2 0.1 0.034 14.3 0.1 1.4 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Pyr_redox_3 PF13738.6 gi|433638850|ref|YP_007284610.1| - 0.022 14.0 0.6 0.034 13.4 0.6 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Fer4_2 PF12797.7 gi|433638850|ref|YP_007284610.1| - 0.088 12.9 0.6 0.29 11.3 0.6 1.9 1 0 0 1 1 1 0 4Fe-4S binding domain GIDA PF01134.22 gi|433638850|ref|YP_007284610.1| - 0.3 10.1 2.3 0.56 9.2 2.3 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A ETF_alpha PF00766.19 gi|433638851|ref|YP_007284611.1| - 7.7e-26 90.0 0.2 1.4e-25 89.1 0.2 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|433638851|ref|YP_007284611.1| - 7.2e-19 68.4 0.0 1.4e-18 67.4 0.0 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein domain BUD22 PF09073.10 gi|433638851|ref|YP_007284611.1| - 9.1 5.5 24.1 12 5.1 24.1 1.1 1 0 0 1 1 1 0 BUD22 ETF PF01012.21 gi|433638852|ref|YP_007284612.1| - 1.5e-34 119.4 0.1 2.1e-34 119.0 0.1 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Bactofilin PF04519.13 gi|433638853|ref|YP_007284613.1| - 2.7e-09 37.2 6.9 3.8e-06 27.1 0.4 3.9 2 2 1 3 3 3 3 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|433638853|ref|YP_007284613.1| - 0.00025 20.6 3.5 0.23 11.2 0.1 4.7 4 1 1 5 5 5 2 Bacterial transferase hexapeptide (six repeats) DUF3494 PF11999.8 gi|433638853|ref|YP_007284613.1| - 0.011 15.4 0.0 0.1 12.2 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3494) Hexapep_2 PF14602.6 gi|433638853|ref|YP_007284613.1| - 0.37 10.6 9.7 0.45 10.3 0.0 4.3 4 1 0 4 4 4 0 Hexapeptide repeat of succinyl-transferase MCPsignal PF00015.21 gi|433638856|ref|YP_007284616.1| - 2.6e-30 105.5 64.8 3.5e-30 105.1 21.4 5.1 3 2 2 5 5 5 2 Methyl-accepting chemotaxis protein (MCP) signalling domain Laminin_II PF06009.12 gi|433638856|ref|YP_007284616.1| - 3.4e-08 33.6 44.1 0.0058 16.7 2.4 5.9 3 2 2 5 5 5 3 Laminin Domain II HAMP PF00672.25 gi|433638856|ref|YP_007284616.1| - 9.2e-06 26.0 18.7 0.0001 22.6 0.0 5.5 6 1 0 6 6 4 2 HAMP domain Seryl_tRNA_N PF02403.22 gi|433638856|ref|YP_007284616.1| - 4.2e-05 23.7 32.3 0.09 13.0 2.0 6.2 2 1 4 6 6 6 4 Seryl-tRNA synthetase N-terminal domain DUF948 PF06103.11 gi|433638856|ref|YP_007284616.1| - 0.00018 21.7 46.4 0.0037 17.5 2.2 7.2 3 3 4 7 7 7 3 Bacterial protein of unknown function (DUF948) BAR_3 PF16746.5 gi|433638856|ref|YP_007284616.1| - 0.0052 16.5 14.2 0.036 13.8 1.4 3.6 3 0 0 3 3 3 2 BAR domain of APPL family DUF1664 PF07889.12 gi|433638856|ref|YP_007284616.1| - 0.0072 16.4 39.4 0.014 15.4 4.0 6.0 5 2 1 6 6 6 3 Protein of unknown function (DUF1664) DUF2788 PF10981.8 gi|433638856|ref|YP_007284616.1| - 0.027 14.5 0.2 0.063 13.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2788) Syntaxin_2 PF14523.6 gi|433638856|ref|YP_007284616.1| - 0.052 13.9 15.6 1.3 9.5 2.5 4.8 2 1 0 3 3 3 0 Syntaxin-like protein Spc7 PF08317.11 gi|433638856|ref|YP_007284616.1| - 0.072 12.0 45.1 0.78 8.6 12.6 4.0 1 1 2 3 3 3 0 Spc7 kinetochore protein TMP_2 PF06791.13 gi|433638856|ref|YP_007284616.1| - 0.079 12.6 30.1 0.65 9.6 11.7 3.5 1 1 0 2 2 2 0 Prophage tail length tape measure protein COG5 PF10392.9 gi|433638856|ref|YP_007284616.1| - 0.14 12.3 12.9 0.15 12.3 0.9 4.0 3 1 0 4 4 4 0 Golgi transport complex subunit 5 FxsA PF04186.13 gi|433638856|ref|YP_007284616.1| - 0.17 12.0 0.8 0.48 10.6 0.1 2.1 2 0 0 2 2 1 0 FxsA cytoplasmic membrane protein MFS_2 PF13347.6 gi|433638856|ref|YP_007284616.1| - 0.2 10.2 0.0 0.35 9.4 0.0 1.3 1 0 0 1 1 1 0 MFS/sugar transport protein Sec3_C_2 PF15278.6 gi|433638856|ref|YP_007284616.1| - 0.28 11.5 7.1 0.84 10.0 0.0 3.9 3 0 0 3 3 3 0 Sec3 exocyst complex subunit Serine_rich PF08824.10 gi|433638856|ref|YP_007284616.1| - 0.35 10.9 16.1 0.05 13.6 1.3 4.1 2 2 1 3 3 3 0 Serine rich protein interaction domain DUF2935 PF11155.8 gi|433638856|ref|YP_007284616.1| - 0.41 11.0 14.6 0.86 9.9 0.3 4.6 2 2 1 4 4 4 0 Domain of unknown function (DUF2935) Tweety PF04906.13 gi|433638856|ref|YP_007284616.1| - 1.3 7.6 13.3 1 7.9 1.5 3.0 2 1 0 2 2 2 0 Tweety EzrA PF06160.12 gi|433638856|ref|YP_007284616.1| - 1.8 6.6 35.4 4.2 5.4 11.4 4.0 2 1 1 3 3 3 0 Septation ring formation regulator, EzrA XH PF03469.14 gi|433638856|ref|YP_007284616.1| - 2.3 8.1 5.9 0.78 9.6 1.5 2.5 2 1 0 2 2 2 0 XH domain LOH1CR12 PF10158.9 gi|433638856|ref|YP_007284616.1| - 3.6 7.6 15.0 0.85 9.6 1.1 4.0 2 2 2 4 4 4 0 Tumour suppressor protein Prominin PF05478.11 gi|433638856|ref|YP_007284616.1| - 4.5 5.1 21.6 3.1 5.6 6.0 2.5 1 1 0 2 2 2 0 Prominin ISG65-75 PF11727.8 gi|433638856|ref|YP_007284616.1| - 4.7 6.4 38.7 0.44 9.7 3.9 4.6 2 1 1 4 4 4 0 Invariant surface glycoprotein Mce4_CUP1 PF11887.8 gi|433638856|ref|YP_007284616.1| - 4.8 6.5 18.7 0.18 11.2 2.9 3.3 2 1 1 3 3 3 0 Cholesterol uptake porter CUP1 of Mce4, putative Dna2 PF08696.11 gi|433638856|ref|YP_007284616.1| - 5.5 6.8 9.7 0.98 9.2 0.3 3.1 2 1 1 3 3 3 0 DNA replication factor Dna2 Atg14 PF10186.9 gi|433638856|ref|YP_007284616.1| - 6.2 5.8 19.4 8 5.4 3.6 2.8 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 gi|433638856|ref|YP_007284616.1| - 7.5 6.7 29.8 0.4 10.9 4.3 5.0 3 3 1 5 5 5 0 Fibrinogen alpha/beta chain family DUF192 PF02643.15 gi|433638857|ref|YP_007284617.1| - 2.7e-22 78.7 0.0 3.1e-22 78.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 AAA_3 PF07726.11 gi|433638858|ref|YP_007284618.1| - 3.3e-66 221.1 0.2 6.3e-66 220.2 0.1 1.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|433638858|ref|YP_007284618.1| - 1.7e-21 75.8 1.4 2.6e-21 75.2 0.3 1.9 2 0 0 2 2 2 1 AAA lid domain AAA_5 PF07728.14 gi|433638858|ref|YP_007284618.1| - 3.7e-16 59.4 0.0 4.2e-15 56.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|433638858|ref|YP_007284618.1| - 1.2e-06 29.0 0.0 2.7e-06 27.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|433638858|ref|YP_007284618.1| - 7.4e-06 25.8 0.0 0.00011 22.0 0.0 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|433638858|ref|YP_007284618.1| - 0.00021 20.7 0.1 0.13 11.7 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|433638858|ref|YP_007284618.1| - 0.0016 17.6 0.0 0.0031 16.6 0.0 1.4 1 1 0 1 1 1 1 MCM P-loop domain RuvB_N PF05496.12 gi|433638858|ref|YP_007284618.1| - 0.0052 16.5 0.0 0.074 12.8 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|433638858|ref|YP_007284618.1| - 0.063 13.4 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) HSCB_C PF07743.13 gi|433638859|ref|YP_007284619.1| - 0.16 12.5 2.5 0.61 10.6 0.5 2.4 2 0 0 2 2 2 0 HSCB C-terminal oligomerisation domain HalX PF08663.10 gi|433638859|ref|YP_007284619.1| - 1.2 9.5 9.0 0.72 10.2 5.0 2.5 2 0 0 2 2 2 0 HalX domain Zincin_2 PF10103.9 gi|433638860|ref|YP_007284620.1| - 6.1e-64 216.4 3.5 6.3e-34 117.7 0.2 2.0 1 1 1 2 2 2 2 Zincin-like metallopeptidase Pkinase PF00069.25 gi|433638862|ref|YP_007284622.1| - 4.2e-25 88.6 0.0 5e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|433638862|ref|YP_007284622.1| - 3.8e-13 49.3 0.0 5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|433638862|ref|YP_007284622.1| - 2.4e-06 27.7 1.1 0.023 14.6 0.3 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family FHA PF00498.26 gi|433638862|ref|YP_007284622.1| - 4.8e-05 23.6 0.0 0.00016 21.9 0.0 1.9 1 0 0 1 1 1 1 FHA domain Kdo PF06293.14 gi|433638862|ref|YP_007284622.1| - 0.00028 20.3 0.0 0.00044 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 gi|433638862|ref|YP_007284622.1| - 0.076 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Kinase-like PP2C_2 PF13672.6 gi|433638863|ref|YP_007284623.1| - 3.9e-11 43.0 2.0 9.3e-11 41.8 2.0 1.7 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C PF00481.21 gi|433638863|ref|YP_007284623.1| - 3.3e-06 26.9 0.4 7.7e-05 22.4 0.1 2.4 2 1 0 2 2 2 1 Protein phosphatase 2C SpoIIE PF07228.12 gi|433638863|ref|YP_007284623.1| - 0.0011 18.9 5.4 0.0062 16.5 5.4 2.1 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) RHH_6 PF16762.5 gi|433638863|ref|YP_007284623.1| - 0.03 15.0 2.4 6.3 7.5 0.5 3.4 3 0 0 3 3 3 0 Ribbon-helix-helix domain FHA PF00498.26 gi|433638863|ref|YP_007284623.1| - 0.073 13.4 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 FHA domain Pkinase PF00069.25 gi|433638864|ref|YP_007284624.1| - 9.5e-31 107.1 0.0 1.3e-30 106.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|433638864|ref|YP_007284624.1| - 4.3e-16 59.0 0.0 8.4e-16 58.0 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase FHA PF00498.26 gi|433638864|ref|YP_007284624.1| - 7.4e-08 32.6 0.2 2.1e-07 31.2 0.2 1.8 1 1 0 1 1 1 1 FHA domain APH PF01636.23 gi|433638864|ref|YP_007284624.1| - 0.00043 20.3 0.0 0.24 11.3 0.0 2.8 3 1 1 4 4 4 2 Phosphotransferase enzyme family VWA PF00092.28 gi|433638865|ref|YP_007284625.1| - 7.2e-23 81.7 0.1 2e-19 70.5 0.0 2.1 2 0 0 2 2 2 2 von Willebrand factor type A domain VWA_2 PF13519.6 gi|433638865|ref|YP_007284625.1| - 1.4e-15 57.8 0.5 1.1e-13 51.7 0.0 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|433638865|ref|YP_007284625.1| - 1.6e-11 44.4 0.0 1e-08 35.3 0.0 2.3 2 0 0 2 2 2 2 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|433638865|ref|YP_007284625.1| - 6.6e-06 25.7 0.0 2.8e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein DUF2201 PF09967.9 gi|433638865|ref|YP_007284625.1| - 8.2e-06 26.0 0.3 4e-05 23.7 0.1 2.4 2 1 0 2 2 2 1 VWA-like domain (DUF2201) AF0941-like PF14591.6 gi|433638865|ref|YP_007284625.1| - 0.14 12.7 2.7 0.23 12.1 0.2 2.3 2 0 0 2 2 2 0 AF0941-like FHA PF00498.26 gi|433638866|ref|YP_007284626.1| - 1.8e-08 34.6 0.0 2.7e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 FHA domain DZR PF12773.7 gi|433638866|ref|YP_007284626.1| - 2.3e-08 33.9 9.8 4.2e-06 26.7 3.0 2.5 2 1 0 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433638866|ref|YP_007284626.1| - 2e-06 27.3 10.0 0.034 13.9 2.0 4.2 3 1 0 3 3 3 2 zinc-ribbon domain zinc-ribbons_6 PF07191.12 gi|433638866|ref|YP_007284626.1| - 2e-06 27.7 6.9 6.3e-05 22.9 1.6 2.5 2 1 0 2 2 2 2 zinc-ribbons Yop-YscD_cpl PF16697.5 gi|433638866|ref|YP_007284626.1| - 0.00024 21.4 0.0 0.00041 20.6 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain zf-TFIIB PF13453.6 gi|433638866|ref|YP_007284626.1| - 0.0067 15.7 8.5 0.066 12.5 1.9 3.5 3 0 0 3 3 3 1 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|433638866|ref|YP_007284626.1| - 0.018 15.1 1.4 0.018 15.1 1.4 3.8 2 2 1 3 3 3 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|433638866|ref|YP_007284626.1| - 0.019 15.0 11.4 8.6 6.5 0.0 4.7 4 0 0 4 4 4 0 NAD-dependent DNA ligase C4 zinc finger domain HypA PF01155.19 gi|433638866|ref|YP_007284626.1| - 0.028 14.4 9.5 1.1 9.3 0.3 3.1 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 gi|433638866|ref|YP_007284626.1| - 0.031 14.2 17.9 1 9.3 3.3 3.4 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|433638866|ref|YP_007284626.1| - 0.042 13.3 16.8 0.053 12.9 1.5 4.1 3 1 1 4 4 4 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|433638866|ref|YP_007284626.1| - 0.07 13.9 13.1 0.79 10.5 5.7 3.1 2 1 0 2 2 2 0 zinc-ribbon family YhfH PF14149.6 gi|433638866|ref|YP_007284626.1| - 0.1 12.6 4.5 13 5.9 0.0 3.5 2 1 1 3 3 3 0 YhfH-like protein Nudix_N_2 PF14803.6 gi|433638866|ref|YP_007284626.1| - 0.11 12.5 16.0 0.71 9.8 3.6 4.6 4 1 1 5 5 5 0 Nudix N-terminal TackOD1 PF18551.1 gi|433638866|ref|YP_007284626.1| - 0.16 11.6 4.8 0.53 9.9 0.7 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 zf-IS66 PF13005.7 gi|433638866|ref|YP_007284626.1| - 0.19 12.1 10.1 5.8 7.4 0.1 4.2 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 DUF35_N PF12172.8 gi|433638866|ref|YP_007284626.1| - 0.22 11.4 16.3 0.14 12.0 2.2 3.7 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NOB1_Zn_bind PF08772.11 gi|433638866|ref|YP_007284626.1| - 0.34 11.1 9.8 2.9 8.1 0.5 3.6 3 1 0 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like DUF2797 PF10977.8 gi|433638866|ref|YP_007284626.1| - 0.38 10.6 2.2 18 5.2 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2797) NMD3 PF04981.13 gi|433638866|ref|YP_007284626.1| - 0.43 10.0 3.0 0.66 9.4 0.1 2.2 2 0 0 2 2 2 0 NMD3 family zf_UBZ PF18439.1 gi|433638866|ref|YP_007284626.1| - 0.44 10.2 8.3 28 4.4 0.1 4.3 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger NRDD PF13597.6 gi|433638866|ref|YP_007284626.1| - 3.7 6.2 4.1 7.8 5.1 4.1 1.5 1 1 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zf-CHY PF05495.12 gi|433638866|ref|YP_007284626.1| - 5 7.7 6.0 33 5.1 0.2 2.6 2 1 0 2 2 2 0 CHY zinc finger DUF2321 PF10083.9 gi|433638866|ref|YP_007284626.1| - 5.2 6.7 5.7 1.4 8.5 1.5 2.1 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) TF_Zn_Ribbon PF08271.12 gi|433638866|ref|YP_007284626.1| - 8 6.1 23.8 0.81 9.2 5.9 4.2 2 1 1 3 3 3 0 TFIIB zinc-binding UPF0547 PF10571.9 gi|433638866|ref|YP_007284626.1| - 8.2 6.6 17.8 3.3 7.9 3.4 4.0 4 1 0 4 4 4 0 Uncharacterised protein family UPF0547 zf_Rg PF17915.1 gi|433638866|ref|YP_007284626.1| - 8.9 5.8 13.2 2.5 7.6 0.0 3.7 3 1 1 4 4 4 0 Reverse gyrase zinc finger UPF0547 PF10571.9 gi|433638867|ref|YP_007284627.1| - 6.6e-05 22.9 3.0 0.00012 22.1 3.0 1.4 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|433638867|ref|YP_007284627.1| - 0.00023 20.7 1.8 0.00037 20.1 1.8 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|433638867|ref|YP_007284627.1| - 0.00039 20.4 0.5 0.00069 19.6 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|433638867|ref|YP_007284627.1| - 0.0041 17.8 0.2 0.0067 17.1 0.2 1.4 1 0 0 1 1 1 1 zinc-ribbon family zf-ribbon_3 PF13248.6 gi|433638867|ref|YP_007284627.1| - 0.0061 15.9 2.6 0.011 15.1 2.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|433638867|ref|YP_007284627.1| - 1.3 8.8 2.9 18 5.2 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn-ribbon_8 PF09723.10 gi|433638867|ref|YP_007284627.1| - 3.4 7.9 6.4 25 5.1 1.7 2.4 1 1 1 2 2 2 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 gi|433638867|ref|YP_007284627.1| - 9 6.6 8.0 18 5.7 1.5 2.4 1 1 1 2 2 2 0 zinc-ribbon LSM PF01423.22 gi|433638868|ref|YP_007284628.1| - 3.1e-19 68.4 0.0 3.6e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|433638868|ref|YP_007284628.1| - 2.2e-08 34.1 0.0 2.8e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain LSM14 PF12701.7 gi|433638868|ref|YP_007284628.1| - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Scd6-like Sm domain Ribosomal_L37e PF01907.19 gi|433638869|ref|YP_007284629.1| - 1.5e-20 73.1 10.2 1.7e-20 72.9 10.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e zf-Mss51 PF13824.6 gi|433638869|ref|YP_007284629.1| - 0.016 15.3 3.4 0.1 12.7 0.6 2.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 HypA PF01155.19 gi|433638869|ref|YP_007284629.1| - 0.031 14.3 2.6 0.036 14.1 2.6 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_6 PF14599.6 gi|433638869|ref|YP_007284629.1| - 0.035 14.1 1.0 0.049 13.7 1.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon zinc_ribbon_4 PF13717.6 gi|433638869|ref|YP_007284629.1| - 0.26 11.3 5.7 1.9 8.5 1.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|433638869|ref|YP_007284629.1| - 0.52 10.2 5.2 1.1 9.2 5.2 1.5 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin_2 PF18073.1 gi|433638869|ref|YP_007284629.1| - 0.76 9.6 5.8 2.8 7.8 0.6 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain RNA_POL_M_15KD PF02150.16 gi|433638869|ref|YP_007284629.1| - 1.7 8.6 5.6 1.1 9.2 0.5 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit DUF2688 PF10892.8 gi|433638869|ref|YP_007284629.1| - 2 7.9 6.2 4.7 6.8 6.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2688) DUF983 PF06170.12 gi|433638869|ref|YP_007284629.1| - 4.2 7.8 4.7 9.4 6.7 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF983) GATase_6 PF13522.6 gi|433638870|ref|YP_007284630.1| - 1.9e-19 70.2 0.0 3.8e-19 69.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|433638870|ref|YP_007284630.1| - 1.1e-17 64.0 0.0 2.2e-17 63.1 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|433638870|ref|YP_007284630.1| - 7e-08 32.1 0.1 1.4e-07 31.1 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 gi|433638870|ref|YP_007284630.1| - 0.0011 17.9 0.0 0.0026 16.7 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferases class-II DUF420 PF04238.12 gi|433638871|ref|YP_007284631.1| - 4.2e-35 120.9 6.8 6.7e-35 120.2 6.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF420) DUF2306 PF10067.9 gi|433638871|ref|YP_007284631.1| - 0.00012 22.3 6.9 0.00012 22.3 6.9 2.1 1 1 1 2 2 2 1 Predicted membrane protein (DUF2306) DUF5389 PF17364.2 gi|433638871|ref|YP_007284631.1| - 0.0029 17.6 0.0 0.0079 16.2 0.0 1.7 2 0 0 2 2 2 1 Family of unknown function (DUF5389) DUF1240 PF06836.12 gi|433638871|ref|YP_007284631.1| - 0.088 13.4 1.1 0.19 12.3 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1240) DUF5368 PF17336.2 gi|433638871|ref|YP_007284631.1| - 0.85 9.8 8.7 0.07 13.3 4.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5368) Phosphodiest PF01663.22 gi|433638873|ref|YP_007284633.1| - 1.4e-59 202.5 0.1 1.6e-59 202.4 0.1 1.0 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|433638873|ref|YP_007284633.1| - 0.0019 17.6 0.7 0.017 14.5 0.1 2.5 3 0 0 3 3 3 1 Sulfatase DUF2063 PF09836.9 gi|433638873|ref|YP_007284633.1| - 0.24 11.7 0.6 0.52 10.6 0.3 1.8 2 0 0 2 2 2 0 Putative DNA-binding domain DUF371 PF04027.13 gi|433638874|ref|YP_007284634.1| - 7.9e-51 171.5 0.4 9.1e-51 171.3 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) Cation_efflux PF01545.21 gi|433638875|ref|YP_007284635.1| - 1.4e-39 135.9 6.5 1.7e-39 135.6 6.5 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|433638875|ref|YP_007284635.1| - 8e-15 54.7 2.9 1.4e-14 53.9 2.9 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter HhH-GPD PF00730.25 gi|433638876|ref|YP_007284636.1| - 3.7e-16 59.5 0.0 6.5e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|433638876|ref|YP_007284636.1| - 6.7e-07 28.9 0.1 4.4e-06 26.3 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|433638876|ref|YP_007284636.1| - 7e-06 26.2 5.3 7e-06 26.2 5.3 1.9 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|433638876|ref|YP_007284636.1| - 0.0098 16.5 0.1 0.16 12.6 0.0 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix domain DUF2400 PF09674.10 gi|433638876|ref|YP_007284636.1| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) DNA_pol_lambd_f PF10391.9 gi|433638876|ref|YP_007284636.1| - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda zinc_ribbon_9 PF14369.6 gi|433638877|ref|YP_007284637.1| - 0.16 12.2 4.9 0.79 10.0 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon bPH_2 PF03703.14 gi|433638878|ref|YP_007284638.1| - 5.4e-06 26.5 0.2 8.9e-06 25.8 0.2 1.3 1 0 0 1 1 1 1 Bacterial PH domain DUF2178 PF09946.9 gi|433638878|ref|YP_007284638.1| - 0.0032 17.6 0.3 0.0045 17.1 0.3 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) DUF389 PF04087.14 gi|433638878|ref|YP_007284638.1| - 0.053 13.6 0.5 0.092 12.8 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF389) DUF5326 PF17260.2 gi|433638878|ref|YP_007284638.1| - 0.069 13.3 1.1 0.13 12.4 1.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5326) DUF4127 PF13552.6 gi|433638878|ref|YP_007284638.1| - 0.16 10.5 0.1 0.21 10.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) KH_7 PF17214.3 gi|433638879|ref|YP_007284639.1| - 2.9e-32 110.4 0.2 4.3e-29 100.3 0.1 2.7 2 0 0 2 2 2 2 KH domain Beta-Casp PF10996.8 gi|433638879|ref|YP_007284639.1| - 7.4e-22 77.7 0.0 1.5e-21 76.8 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|433638879|ref|YP_007284639.1| - 3.8e-16 58.8 0.0 1.1e-15 57.3 0.0 1.8 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|433638879|ref|YP_007284639.1| - 1.8e-14 54.2 3.3 6.8e-14 52.3 3.3 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|433638879|ref|YP_007284639.1| - 1.1e-12 47.8 0.0 1.9e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|433638879|ref|YP_007284639.1| - 9.7e-11 41.6 0.1 1.8e-10 40.6 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|433638879|ref|YP_007284639.1| - 6.5e-08 32.3 0.0 7.1e-07 29.0 0.0 2.3 2 0 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.6 gi|433638879|ref|YP_007284639.1| - 0.00043 20.2 0.2 0.001 19.0 0.0 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|433638879|ref|YP_007284639.1| - 0.042 13.7 0.1 0.18 11.6 0.0 2.1 2 0 0 2 2 2 0 KH domain CP_ATPgrasp_1 PF04174.13 gi|433638879|ref|YP_007284639.1| - 0.078 12.0 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 A circularly permuted ATPgrasp KH_4 PF13083.6 gi|433638879|ref|YP_007284639.1| - 0.085 12.7 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 KH domain DUF3879 PF12995.7 gi|433638880|ref|YP_007284640.1| - 0.2 11.4 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3879) HTH_20 PF12840.7 gi|433638881|ref|YP_007284641.1| - 3.7e-20 71.7 4.1 2.1e-09 37.3 0.1 2.7 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|433638881|ref|YP_007284641.1| - 8.8e-17 60.7 0.1 8.1e-08 32.0 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|433638881|ref|YP_007284641.1| - 2.3e-11 43.1 0.0 2.6e-07 30.1 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433638881|ref|YP_007284641.1| - 6.1e-11 42.1 2.0 5.1e-08 32.7 0.1 2.5 2 0 0 2 2 2 2 MarR family MarR PF01047.22 gi|433638881|ref|YP_007284641.1| - 3.6e-10 39.6 0.0 6.8e-08 32.3 0.0 2.5 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 gi|433638881|ref|YP_007284641.1| - 3.9e-09 36.2 3.5 2.6e-05 23.9 0.2 3.3 3 0 0 3 3 3 2 IclR helix-turn-helix domain GntR PF00392.21 gi|433638881|ref|YP_007284641.1| - 8.6e-08 31.7 0.0 0.0021 17.7 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|433638881|ref|YP_007284641.1| - 1.2e-07 31.8 0.1 0.00013 22.1 0.0 3.0 3 0 0 3 3 3 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|433638881|ref|YP_007284641.1| - 8e-07 28.9 0.0 0.046 13.6 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|433638881|ref|YP_007284641.1| - 1.7e-06 28.4 0.0 0.0054 17.1 0.0 2.5 2 0 0 2 2 2 2 Penicillinase repressor RP-C PF03428.13 gi|433638881|ref|YP_007284641.1| - 6.5e-06 25.9 0.1 0.025 14.3 0.0 2.3 2 0 0 2 2 2 2 Replication protein C N-terminal domain HTH_Crp_2 PF13545.6 gi|433638881|ref|YP_007284641.1| - 8.1e-06 25.7 0.2 0.0003 20.7 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Cdc6_C PF09079.11 gi|433638881|ref|YP_007284641.1| - 2.2e-05 24.4 0.1 0.063 13.3 0.0 2.5 2 0 0 2 2 2 2 CDC6, C terminal winged helix domain DUF2250 PF10007.9 gi|433638881|ref|YP_007284641.1| - 5.3e-05 23.2 0.0 0.018 15.1 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) LexA_DNA_bind PF01726.16 gi|433638881|ref|YP_007284641.1| - 0.00033 20.4 0.1 0.1 12.4 0.0 2.3 2 0 0 2 2 2 1 LexA DNA binding domain HTH_11 PF08279.12 gi|433638881|ref|YP_007284641.1| - 0.00075 19.4 0.1 0.54 10.3 0.0 2.7 3 0 0 3 3 2 1 HTH domain HTH_34 PF13601.6 gi|433638881|ref|YP_007284641.1| - 0.0009 19.4 0.0 0.16 12.2 0.0 2.6 3 0 0 3 3 2 1 Winged helix DNA-binding domain DprA_WH PF17782.1 gi|433638881|ref|YP_007284641.1| - 0.0012 18.9 2.2 0.015 15.4 0.7 2.9 2 0 0 2 2 2 1 DprA winged helix domain Rrf2 PF02082.20 gi|433638881|ref|YP_007284641.1| - 0.0018 18.6 0.0 2.9 8.3 0.0 2.6 2 0 0 2 2 2 1 Transcriptional regulator HTH_12 PF08461.10 gi|433638881|ref|YP_007284641.1| - 0.0028 17.6 0.1 0.73 9.8 0.0 2.5 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain HTH_29 PF13551.6 gi|433638881|ref|YP_007284641.1| - 0.0028 17.6 0.1 0.26 11.4 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn helix PaaX PF07848.12 gi|433638881|ref|YP_007284641.1| - 0.0048 17.1 0.0 4.2 7.7 0.0 2.5 2 0 0 2 2 2 1 PaaX-like protein Laminin_I PF06008.14 gi|433638881|ref|YP_007284641.1| - 0.0094 15.7 0.7 0.014 15.1 0.7 1.2 1 0 0 1 1 1 1 Laminin Domain I DUF2513 PF10711.9 gi|433638881|ref|YP_007284641.1| - 0.011 16.0 0.0 0.99 9.7 0.0 2.6 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) HTH_27 PF13463.6 gi|433638881|ref|YP_007284641.1| - 0.015 15.7 0.2 0.65 10.5 0.0 2.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_CodY PF08222.11 gi|433638881|ref|YP_007284641.1| - 0.016 14.7 0.0 0.83 9.3 0.0 2.4 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_DeoR PF08220.12 gi|433638881|ref|YP_007284641.1| - 0.033 13.9 1.3 4.8 7.0 0.1 2.6 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain PadR PF03551.14 gi|433638881|ref|YP_007284641.1| - 0.048 13.6 0.1 0.3 11.1 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_1 PF00126.27 gi|433638881|ref|YP_007284641.1| - 0.055 13.4 0.0 0.23 11.4 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory helix-turn-helix protein, lysR family TFIIE_alpha PF02002.17 gi|433638881|ref|YP_007284641.1| - 0.057 13.3 0.0 0.77 9.6 0.0 2.2 2 0 0 2 2 2 0 TFIIE alpha subunit MerR PF00376.23 gi|433638881|ref|YP_007284641.1| - 0.062 13.1 1.2 1.1 9.1 0.2 3.0 2 2 0 2 2 2 0 MerR family regulatory protein FUR PF01475.19 gi|433638881|ref|YP_007284641.1| - 0.067 13.3 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 Ferric uptake regulator family I_LWEQ PF01608.17 gi|433638881|ref|YP_007284641.1| - 0.076 13.3 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 I/LWEQ domain HTH_AsnC-type PF13404.6 gi|433638881|ref|YP_007284641.1| - 0.09 12.6 0.1 0.35 10.7 0.0 2.1 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain BLACT_WH PF17778.1 gi|433638881|ref|YP_007284641.1| - 0.11 12.5 0.6 2.3 8.3 0.2 2.4 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain B-block_TFIIIC PF04182.12 gi|433638881|ref|YP_007284641.1| - 0.2 11.9 0.0 1.7 8.9 0.0 2.1 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC DUF948 PF06103.11 gi|433638881|ref|YP_007284641.1| - 1.1 9.5 5.1 1.7 9.0 3.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) zf-CHY PF05495.12 gi|433638882|ref|YP_007284642.1| - 1.4e-12 47.9 8.2 2e-12 47.4 8.2 1.2 1 0 0 1 1 1 1 CHY zinc finger DZR PF12773.7 gi|433638882|ref|YP_007284642.1| - 0.002 18.1 11.8 0.0065 16.5 8.6 2.2 1 1 1 2 2 2 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433638882|ref|YP_007284642.1| - 0.057 13.5 6.7 0.19 11.9 0.5 2.7 1 1 2 3 3 3 0 Zinc ribbon domain HypA PF01155.19 gi|433638882|ref|YP_007284642.1| - 0.8 9.7 7.1 4.8 7.2 6.8 2.0 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 gi|433638882|ref|YP_007284642.1| - 4.1 7.7 11.7 4.9 7.5 1.4 3.3 2 1 1 3 3 3 0 zinc-ribbon GvpO PF05800.11 gi|433638883|ref|YP_007284643.1| - 5.9e-29 99.9 0.7 1e-28 99.2 0.4 1.5 1 1 1 2 2 2 1 Gas vesicle synthesis protein GvpO zf-SAP30 PF13866.6 gi|433638883|ref|YP_007284643.1| - 0.0091 16.1 0.5 0.017 15.2 0.5 1.4 1 0 0 1 1 1 1 SAP30 zinc-finger Gas_vesicle PF00741.18 gi|433638884|ref|YP_007284644.1| - 2.8e-16 59.4 6.8 3.7e-16 59.0 6.8 1.2 1 0 0 1 1 1 1 Gas vesicle protein GvpL_GvpF PF06386.11 gi|433638885|ref|YP_007284645.1| - 1.1e-46 159.7 2.2 3.4e-25 89.4 0.5 2.0 1 1 1 2 2 2 2 Gas vesicle synthesis protein GvpL/GvpF MukB_hinge PF16330.5 gi|433638885|ref|YP_007284645.1| - 0.049 13.3 0.1 7.8 6.2 0.0 2.6 2 1 1 3 3 3 0 MukB hinge domain GvpG PF05120.12 gi|433638886|ref|YP_007284646.1| - 0.00055 19.9 2.3 0.00064 19.7 2.3 1.1 1 0 0 1 1 1 1 Gas vesicle protein G DHR10 PF18595.1 gi|433638886|ref|YP_007284646.1| - 0.016 15.2 2.6 0.019 15.0 2.6 1.0 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain Gas_vesicle PF00741.18 gi|433638888|ref|YP_007284648.1| - 1.4e-14 53.9 7.4 1.9e-14 53.5 7.4 1.2 1 0 0 1 1 1 1 Gas vesicle protein GvpK PF05121.12 gi|433638889|ref|YP_007284649.1| - 3.4e-24 84.7 8.8 4e-24 84.5 8.5 1.3 1 1 0 1 1 1 1 Gas vesicle protein K Rx_N PF18052.1 gi|433638889|ref|YP_007284649.1| - 0.0055 17.0 2.7 0.007 16.6 2.7 1.1 1 0 0 1 1 1 1 Rx N-terminal domain DUF2730 PF10805.8 gi|433638889|ref|YP_007284649.1| - 0.0056 16.8 0.1 0.0076 16.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) Ribosomal_S13 PF00416.22 gi|433638889|ref|YP_007284649.1| - 0.016 15.6 0.2 0.02 15.3 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein S13/S18 End3 PF12761.7 gi|433638889|ref|YP_007284649.1| - 0.017 15.3 0.6 0.022 15.0 0.6 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Csm1_N PF18504.1 gi|433638889|ref|YP_007284649.1| - 0.045 14.1 0.7 0.085 13.2 0.7 1.5 1 1 0 1 1 1 0 Csm1 N-terminal domain FAM91_C PF14648.6 gi|433638889|ref|YP_007284649.1| - 0.063 12.1 0.1 0.069 12.0 0.1 1.0 1 0 0 1 1 1 0 FAM91 C-terminus DUF2209 PF09974.9 gi|433638889|ref|YP_007284649.1| - 0.092 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2209) GvpL_GvpF PF06386.11 gi|433638890|ref|YP_007284650.1| - 3.5e-75 253.1 0.3 4.1e-75 252.9 0.3 1.0 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpL/GvpF Gas_vesicle PF00741.18 gi|433638891|ref|YP_007284651.1| - 1.3e-11 44.4 10.3 1.7e-11 44.0 10.3 1.2 1 0 0 1 1 1 1 Gas vesicle protein SUB1_ProdP9 PF18213.1 gi|433638891|ref|YP_007284651.1| - 0.21 11.4 0.1 0.29 11.0 0.1 1.2 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 zf-nanos PF05741.13 gi|433638892|ref|YP_007284652.1| - 0.0042 17.3 0.3 0.0077 16.4 0.3 1.5 1 1 0 1 1 1 1 Nanos RNA binding domain NapB PF03892.14 gi|433638892|ref|YP_007284652.1| - 0.11 12.5 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) Ribosomal_L44 PF00935.19 gi|433638892|ref|YP_007284652.1| - 0.12 12.8 0.2 5.9 7.4 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein L44 zf-CCHC_2 PF13696.6 gi|433638892|ref|YP_007284652.1| - 0.16 11.8 0.1 0.16 11.8 0.1 1.6 2 0 0 2 2 2 0 Zinc knuckle MutS_V PF00488.21 gi|433638893|ref|YP_007284653.1| - 4e-07 30.2 0.0 9.2e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 MutS domain V RRF PF01765.19 gi|433638893|ref|YP_007284653.1| - 0.0036 17.3 0.1 0.56 10.1 0.1 2.9 3 0 0 3 3 3 1 Ribosome recycling factor AAA_21 PF13304.6 gi|433638893|ref|YP_007284653.1| - 0.0063 16.4 0.1 0.032 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_28 PF13521.6 gi|433638893|ref|YP_007284653.1| - 0.038 14.2 0.1 0.038 14.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|433638893|ref|YP_007284653.1| - 0.061 13.8 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 gi|433638893|ref|YP_007284653.1| - 0.081 13.0 0.1 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Dynamin family AAA_14 PF13173.6 gi|433638893|ref|YP_007284653.1| - 0.082 12.9 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain IMS_HHH PF11798.8 gi|433638893|ref|YP_007284653.1| - 0.19 12.1 0.0 0.43 11.0 0.0 1.7 1 0 0 1 1 1 0 IMS family HHH motif MutS_III PF05192.18 gi|433638893|ref|YP_007284653.1| - 0.59 10.3 10.6 6.3 7.0 10.6 2.2 1 1 0 1 1 1 0 MutS domain III HAD_2 PF13419.6 gi|433638894|ref|YP_007284654.1| - 1.8e-15 57.5 0.0 2.3e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433638894|ref|YP_007284654.1| - 1.2e-08 35.5 0.6 2.5e-07 31.2 0.6 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433638894|ref|YP_007284654.1| - 4e-08 33.2 0.0 7.3e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|433638894|ref|YP_007284654.1| - 0.022 15.2 0.2 0.077 13.4 0.2 1.9 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase HTH_10 PF04967.12 gi|433638895|ref|YP_007284655.1| - 8.2e-19 67.2 0.1 1.2e-18 66.6 0.1 1.2 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433638895|ref|YP_007284655.1| - 4.9e-08 33.0 4.7 4.9e-08 33.0 4.7 1.9 1 1 1 2 2 2 1 GAF and HTH_10 associated domain HTH_50 PF18024.1 gi|433638895|ref|YP_007284655.1| - 0.17 11.5 0.1 0.37 10.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MaoC_dehydratas PF01575.19 gi|433638896|ref|YP_007284656.1| - 2e-14 53.2 0.0 2.6e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|433638896|ref|YP_007284656.1| - 0.00079 19.6 0.2 0.002 18.2 0.2 1.6 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase GST_N_2 PF13409.6 gi|433638897|ref|YP_007284657.1| - 6.9e-21 74.3 0.1 1.5e-20 73.3 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 gi|433638897|ref|YP_007284657.1| - 3.1e-12 46.3 0.4 6.8e-12 45.2 0.4 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 gi|433638897|ref|YP_007284657.1| - 2e-07 31.1 0.1 4.8e-07 29.9 0.1 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 gi|433638897|ref|YP_007284657.1| - 1.5e-05 25.3 0.0 0.00073 19.9 0.0 2.4 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 gi|433638897|ref|YP_007284657.1| - 0.00021 21.4 0.0 0.0004 20.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 gi|433638897|ref|YP_007284657.1| - 0.0031 17.3 0.1 0.007 16.1 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain N6_N4_Mtase PF01555.18 gi|433638898|ref|YP_007284658.1| - 1.7e-15 57.4 0.0 1.6e-07 31.3 0.0 2.1 2 0 0 2 2 2 2 DNA methylase TrkA_N PF02254.18 gi|433638899|ref|YP_007284659.1| - 1.5e-25 89.7 0.1 2.4e-25 89.0 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|433638899|ref|YP_007284659.1| - 3.2e-13 49.3 0.4 6.9e-13 48.2 0.1 1.7 2 0 0 2 2 2 1 TrkA-C domain UDPG_MGDP_dh_N PF03721.14 gi|433638899|ref|YP_007284659.1| - 1.4e-05 24.8 0.1 2.1e-05 24.2 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|433638899|ref|YP_007284659.1| - 4.8e-05 23.7 0.0 9.4e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|433638899|ref|YP_007284659.1| - 0.00025 21.3 0.2 0.00039 20.7 0.2 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|433638899|ref|YP_007284659.1| - 0.0005 20.0 0.0 0.00094 19.1 0.0 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 gi|433638899|ref|YP_007284659.1| - 0.0015 18.9 0.1 0.0026 18.1 0.1 1.4 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433638899|ref|YP_007284659.1| - 0.0022 17.4 0.1 0.0039 16.6 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|433638899|ref|YP_007284659.1| - 0.0025 17.9 0.0 0.0038 17.3 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ApbA PF02558.16 gi|433638899|ref|YP_007284659.1| - 0.0032 17.1 0.0 0.0047 16.6 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA XdhC_C PF13478.6 gi|433638899|ref|YP_007284659.1| - 0.0039 17.7 0.0 0.0068 16.9 0.0 1.5 1 0 0 1 1 1 1 XdhC Rossmann domain NAD_binding_2 PF03446.15 gi|433638899|ref|YP_007284659.1| - 0.0078 16.4 0.0 0.019 15.2 0.0 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 gi|433638899|ref|YP_007284659.1| - 0.011 15.7 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding ADH_zinc_N PF00107.26 gi|433638899|ref|YP_007284659.1| - 0.011 15.7 0.1 0.029 14.3 0.0 1.8 1 1 1 2 2 2 0 Zinc-binding dehydrogenase F420_oxidored PF03807.17 gi|433638899|ref|YP_007284659.1| - 0.017 15.7 0.0 0.043 14.4 0.0 1.7 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|433638899|ref|YP_007284659.1| - 0.046 13.3 0.0 0.077 12.6 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|433638899|ref|YP_007284659.1| - 0.097 11.9 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain HPTransfase PF10090.9 gi|433638900|ref|YP_007284660.1| - 0.058 13.2 0.1 0.18 11.6 0.0 1.8 2 0 0 2 2 2 0 Histidine phosphotransferase C-terminal domain PATR PF12951.7 gi|433638900|ref|YP_007284660.1| - 0.12 12.5 1.0 0.48 10.6 1.0 2.1 1 0 0 1 1 1 0 Passenger-associated-transport-repeat VWA PF00092.28 gi|433638901|ref|YP_007284661.1| - 1.9e-13 51.1 0.0 4.7e-13 49.8 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|433638901|ref|YP_007284661.1| - 1.6e-07 31.4 0.0 3.8e-07 30.2 0.0 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|433638901|ref|YP_007284661.1| - 3.8e-05 24.3 0.0 9.1e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain Pilin_N PF07790.11 gi|433638901|ref|YP_007284661.1| - 0.0069 17.3 0.2 0.025 15.5 0.2 2.1 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal DUF2572 PF10833.8 gi|433638901|ref|YP_007284661.1| - 0.0086 15.9 0.0 0.87 9.3 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2572) VWA_CoxE PF05762.14 gi|433638901|ref|YP_007284661.1| - 0.086 12.2 0.1 0.2 11.0 0.1 1.5 1 1 0 1 1 1 0 VWA domain containing CoxE-like protein CARDB PF07705.11 gi|433638902|ref|YP_007284662.1| - 0.0003 21.0 9.4 0.0037 17.5 0.9 4.0 3 1 1 4 4 4 2 CARDB Pilin_N PF07790.11 gi|433638902|ref|YP_007284662.1| - 0.002 19.0 0.2 0.002 19.0 0.2 2.9 3 0 0 3 3 3 1 Archaeal Type IV pilin, N-terminal ADK PF00406.22 gi|433638903|ref|YP_007284663.1| - 4.3e-45 153.5 0.0 5.2e-45 153.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|433638903|ref|YP_007284663.1| - 5e-21 75.6 0.5 1.3e-20 74.3 0.1 1.8 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 gi|433638903|ref|YP_007284663.1| - 4.7e-16 58.5 2.3 4.7e-16 58.5 2.3 1.8 2 0 0 2 2 2 1 Adenylate kinase, active site lid AAA_18 PF13238.6 gi|433638903|ref|YP_007284663.1| - 7.3e-07 29.8 0.0 1.4e-06 28.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain Ploopntkinase3 PF18751.1 gi|433638903|ref|YP_007284663.1| - 0.00035 20.6 0.0 0.006 16.5 0.0 2.2 2 0 0 2 2 2 1 P-loop Nucleotide Kinase3 AAA_33 PF13671.6 gi|433638903|ref|YP_007284663.1| - 0.00064 19.9 0.0 0.0024 18.0 0.0 1.9 2 1 0 2 2 2 1 AAA domain TF_Zn_Ribbon PF08271.12 gi|433638903|ref|YP_007284663.1| - 0.0023 17.4 4.5 0.006 16.1 4.5 1.8 1 0 0 1 1 1 1 TFIIB zinc-binding zf-C4_Topoisom PF01396.19 gi|433638903|ref|YP_007284663.1| - 0.0045 16.7 0.5 0.15 11.9 0.1 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger Zn-ribbon_8 PF09723.10 gi|433638903|ref|YP_007284663.1| - 0.016 15.4 2.1 0.03 14.4 2.1 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DZR PF12773.7 gi|433638903|ref|YP_007284663.1| - 0.037 14.1 0.2 0.071 13.1 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|433638903|ref|YP_007284663.1| - 0.043 13.8 0.1 0.07 13.1 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF1272 PF06906.11 gi|433638903|ref|YP_007284663.1| - 0.14 12.2 1.7 1.6 8.9 1.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zf-RRN7 PF11781.8 gi|433638903|ref|YP_007284663.1| - 0.22 11.2 4.9 4.3 7.1 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 XPA_N PF01286.18 gi|433638903|ref|YP_007284663.1| - 0.36 10.9 2.4 6.2 7.0 0.1 2.3 2 0 0 2 2 2 0 XPA protein N-terminal Nudix_N_2 PF14803.6 gi|433638903|ref|YP_007284663.1| - 0.92 9.5 3.3 20 5.2 0.3 2.4 2 0 0 2 2 2 0 Nudix N-terminal zf_C2H2_13 PF18508.1 gi|433638903|ref|YP_007284663.1| - 1.4 8.6 3.1 2.4 7.8 0.1 2.2 2 0 0 2 2 2 0 Zinc finger domain COX2 PF00116.20 gi|433638905|ref|YP_007284665.1| - 1.1e-14 54.3 0.0 2.8e-14 53.0 0.0 1.7 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain GTP1_OBG PF01018.22 gi|433638905|ref|YP_007284665.1| - 0.014 15.0 0.2 0.014 15.0 0.2 1.7 2 0 0 2 2 2 0 GTP1/OBG DUF2160 PF09928.9 gi|433638905|ref|YP_007284665.1| - 0.039 14.3 0.1 0.097 13.0 0.1 1.7 1 1 0 1 1 1 0 Predicted small integral membrane protein (DUF2160) COX1 PF00115.20 gi|433638906|ref|YP_007284666.1| - 1.3e-117 393.3 84.8 1.3e-117 393.3 84.8 3.5 3 1 1 4 4 4 1 Cytochrome C and Quinol oxidase polypeptide I COX3 PF00510.18 gi|433638906|ref|YP_007284666.1| - 4.1e-16 59.6 19.7 4.1e-16 59.6 19.7 3.3 3 2 0 3 3 3 1 Cytochrome c oxidase subunit III COX4_pro PF03626.14 gi|433638907|ref|YP_007284667.1| - 6e-10 39.4 12.0 7.5e-10 39.1 12.0 1.1 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV DUF2678 PF10856.8 gi|433638907|ref|YP_007284667.1| - 0.0038 17.1 0.4 0.0044 16.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2678) DUF4793 PF16041.5 gi|433638907|ref|YP_007284667.1| - 0.02 15.1 1.5 0.81 9.9 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4793) Cytochrom_B_C PF00032.17 gi|433638907|ref|YP_007284667.1| - 0.075 13.3 3.8 0.11 12.8 3.7 1.3 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF2070 PF09843.9 gi|433638907|ref|YP_007284667.1| - 0.43 8.8 8.5 0.52 8.5 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3099 PF11298.8 gi|433638907|ref|YP_007284667.1| - 3.2 8.0 8.5 2.3 8.4 1.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3099) Ferredoxin_N PF16947.5 gi|433638908|ref|YP_007284668.1| - 1.7e-33 114.6 2.5 5.1e-33 113.0 2.5 1.9 1 0 0 1 1 1 1 N-terminal region of 4Fe-4S ferredoxin iron-sulfur binding Fer4_7 PF12838.7 gi|433638908|ref|YP_007284668.1| - 2.3e-14 53.7 22.7 3e-08 34.1 7.2 3.5 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|433638908|ref|YP_007284668.1| - 3.4e-11 43.1 17.9 9e-11 41.8 4.6 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|433638908|ref|YP_007284668.1| - 9.9e-11 41.6 26.0 3.1e-08 33.6 4.2 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433638908|ref|YP_007284668.1| - 7.7e-10 38.8 23.5 8.7e-07 29.0 4.3 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|433638908|ref|YP_007284668.1| - 3e-09 36.3 32.2 9.4e-05 22.1 3.5 5.2 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|433638908|ref|YP_007284668.1| - 6.9e-07 29.1 31.7 0.0011 18.9 2.9 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_17 PF13534.6 gi|433638908|ref|YP_007284668.1| - 2e-06 28.2 18.8 0.0025 18.3 1.6 3.6 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433638908|ref|YP_007284668.1| - 9.7e-06 25.4 8.8 0.00025 20.9 1.9 5.1 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|433638908|ref|YP_007284668.1| - 0.00016 22.4 41.5 0.57 11.3 5.1 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|433638908|ref|YP_007284668.1| - 0.00034 21.5 21.1 0.37 11.8 1.2 4.5 4 0 0 4 4 4 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|433638908|ref|YP_007284668.1| - 0.0037 17.7 25.0 0.026 15.0 7.1 3.6 2 2 1 3 3 3 1 4Fe-4S dicluster domain TAT_signal PF10518.9 gi|433638908|ref|YP_007284668.1| - 0.04 13.8 3.3 0.098 12.5 3.3 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Fer4_15 PF13459.6 gi|433638908|ref|YP_007284668.1| - 0.15 12.9 11.1 1.4 9.7 0.4 4.1 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|433638908|ref|YP_007284668.1| - 5.7 7.2 27.7 5.9 7.1 11.3 3.7 3 1 0 3 3 3 0 4Fe-4S dicluster domain HIPIP PF01355.17 gi|433638909|ref|YP_007284669.1| - 1.9e-05 24.9 2.2 2.8e-05 24.4 2.2 1.4 1 1 0 1 1 1 1 High potential iron-sulfur protein SecY PF00344.20 gi|433638910|ref|YP_007284670.1| - 4.4e-68 229.8 17.4 5.5e-68 229.5 17.4 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|433638910|ref|YP_007284670.1| - 1.7e-09 37.3 0.5 5e-09 35.8 0.5 1.9 1 0 0 1 1 1 1 Plug domain of Sec61p Ribosomal_L27A PF00828.19 gi|433638911|ref|YP_007284671.1| - 2e-16 60.8 0.0 2e-16 60.8 0.0 1.4 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L30 PF00327.20 gi|433638912|ref|YP_007284672.1| - 2.1e-07 30.7 0.0 3.7e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5 PF00333.20 gi|433638913|ref|YP_007284673.1| - 4.8e-24 84.1 0.6 1.9e-23 82.2 0.1 2.2 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|433638913|ref|YP_007284673.1| - 2e-22 78.4 0.1 3.3e-22 77.7 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain DUF1421 PF07223.11 gi|433638913|ref|YP_007284673.1| - 0.1 12.4 0.1 1.6 8.7 0.0 2.4 2 0 0 2 2 2 0 UBA-like domain (DUF1421) Ribosomal_L5e PF17144.4 gi|433638914|ref|YP_007284674.1| - 5.4e-28 98.0 0.0 4.8e-17 62.4 0.0 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|433638914|ref|YP_007284674.1| - 4.4e-06 27.1 0.0 6.7e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L19e PF01280.20 gi|433638915|ref|YP_007284675.1| - 1.1e-56 190.9 5.3 1.2e-56 190.7 5.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e SHOCT PF09851.9 gi|433638915|ref|YP_007284675.1| - 0.0025 17.5 6.8 0.0063 16.2 1.3 3.4 2 1 0 3 3 3 1 Short C-terminal domain SAND PF01342.21 gi|433638915|ref|YP_007284675.1| - 0.054 13.2 0.1 0.099 12.4 0.1 1.5 1 0 0 1 1 1 0 SAND domain 4F5 PF04419.14 gi|433638915|ref|YP_007284675.1| - 0.17 12.8 13.1 0.86 10.5 13.1 2.2 1 1 0 1 1 1 0 4F5 protein family Ribosomal_L32e PF01655.18 gi|433638916|ref|YP_007284676.1| - 4.4e-32 110.7 0.1 9.2e-32 109.7 0.1 1.5 2 0 0 2 2 2 1 Ribosomal protein L32 HHH_5 PF14520.6 gi|433638916|ref|YP_007284676.1| - 1.5e-11 44.7 0.6 1.5e-11 44.7 0.6 2.1 3 0 0 3 3 3 1 Helix-hairpin-helix domain HHH PF00633.23 gi|433638916|ref|YP_007284676.1| - 1.9e-09 36.9 2.3 0.00022 20.9 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|433638916|ref|YP_007284676.1| - 4.8e-06 26.6 0.6 1.2e-05 25.3 0.5 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|433638916|ref|YP_007284676.1| - 6.9e-06 25.8 0.0 1.9e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH_3 PF12836.7 gi|433638916|ref|YP_007284676.1| - 0.009 16.3 0.1 0.65 10.3 0.0 2.4 1 1 1 2 2 2 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|433638916|ref|YP_007284676.1| - 0.013 15.7 0.0 0.044 14.0 0.0 2.0 2 1 0 2 2 2 0 Pathogenicity locus HHH_8 PF14716.6 gi|433638916|ref|YP_007284676.1| - 0.049 14.0 0.5 5.4 7.5 0.1 2.5 1 1 1 2 2 2 0 Helix-hairpin-helix domain LytR_C PF13399.6 gi|433638916|ref|YP_007284676.1| - 0.067 14.2 1.9 0.58 11.2 0.5 2.8 2 1 1 3 3 3 0 LytR cell envelope-related transcriptional attenuator Ribosomal_L6 PF00347.23 gi|433638917|ref|YP_007284677.1| - 1.7e-26 92.7 2.0 1.4e-12 48.1 0.1 2.0 2 0 0 2 2 2 2 Ribosomal protein L6 Glyco_hydro_65C PF03633.15 gi|433638917|ref|YP_007284677.1| - 1.2 9.1 4.1 7.2 6.6 0.6 3.1 2 2 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain HSP20 PF00011.21 gi|433638917|ref|YP_007284677.1| - 1.7 8.8 4.8 5.7 7.1 0.1 3.3 1 1 3 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_S8 PF00410.19 gi|433638918|ref|YP_007284678.1| - 5.4e-23 81.3 0.0 7.1e-23 80.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|433638919|ref|YP_007284679.1| - 2.4e-11 43.2 2.7 2.6e-11 43.1 2.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DUF4428 PF14471.6 gi|433638919|ref|YP_007284679.1| - 0.0047 16.8 0.4 0.0055 16.6 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) Ribosomal_L5_C PF00673.21 gi|433638920|ref|YP_007284680.1| - 5.6e-21 74.5 0.0 8.8e-21 73.9 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|433638920|ref|YP_007284680.1| - 3e-15 56.3 0.0 4.8e-15 55.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|433638921|ref|YP_007284681.1| - 1.1e-21 76.5 0.0 2.3e-21 75.5 0.0 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|433638921|ref|YP_007284681.1| - 2.1e-10 40.5 0.1 3.4e-10 39.9 0.1 1.3 1 0 0 1 1 1 1 RS4NT (NUC023) domain KOW PF00467.29 gi|433638921|ref|YP_007284681.1| - 0.00067 19.5 0.2 0.0026 17.6 0.2 2.0 1 0 0 1 1 1 1 KOW motif S4 PF01479.25 gi|433638921|ref|YP_007284681.1| - 0.11 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 S4 domain Ribosomal_L26 PF16906.5 gi|433638922|ref|YP_007284682.1| - 1.7e-20 73.3 0.0 2.1e-20 73.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|433638922|ref|YP_007284682.1| - 0.00024 20.9 1.5 0.00044 20.1 1.5 1.5 1 0 0 1 1 1 1 KOW motif Myosin_N PF02736.19 gi|433638922|ref|YP_007284682.1| - 1.3 9.0 4.7 1.1 9.2 0.7 2.5 2 1 1 3 3 3 0 Myosin N-terminal SH3-like domain Ribosomal_L14 PF00238.19 gi|433638923|ref|YP_007284683.1| - 8.9e-37 125.9 0.7 1.1e-36 125.6 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.20 gi|433638924|ref|YP_007284684.1| - 1.3e-24 86.1 1.5 1.6e-24 85.8 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|433638924|ref|YP_007284684.1| - 0.00027 21.3 0.0 0.00047 20.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal UPF0086 PF01868.16 gi|433638925|ref|YP_007284685.1| - 9.7e-25 86.3 0.0 1.3e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_L29 PF00831.23 gi|433638926|ref|YP_007284686.1| - 1.3e-15 57.1 0.3 1.6e-15 56.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein Med9 PF07544.13 gi|433638926|ref|YP_007284686.1| - 0.026 14.6 0.6 0.055 13.6 0.3 1.6 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 RPAP1_N PF08621.10 gi|433638926|ref|YP_007284686.1| - 0.084 12.7 2.9 0.15 11.9 2.9 1.4 1 0 0 1 1 1 0 RPAP1-like, N-terminal FUSC-like PF12805.7 gi|433638926|ref|YP_007284686.1| - 0.25 10.4 0.0 0.27 10.3 0.0 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Ribosomal_S3_C PF00189.20 gi|433638927|ref|YP_007284687.1| - 2.8e-20 72.6 0.2 6.7e-20 71.4 0.2 1.7 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|433638927|ref|YP_007284687.1| - 2.9e-16 59.0 0.0 7e-16 57.8 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|433638927|ref|YP_007284687.1| - 0.017 14.9 0.5 0.09 12.6 0.2 2.4 2 0 0 2 2 2 0 KH domain Ribosomal_L22 PF00237.19 gi|433638928|ref|YP_007284688.1| - 1.3e-19 70.4 0.0 1.6e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S19 PF00203.21 gi|433638929|ref|YP_007284689.1| - 8.1e-30 102.5 0.0 1.1e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.21 gi|433638929|ref|YP_007284689.1| - 0.06 12.4 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L2_C PF03947.18 gi|433638930|ref|YP_007284690.1| - 2e-47 160.5 1.4 3.3e-47 159.8 1.4 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|433638930|ref|YP_007284690.1| - 3.8e-17 62.0 0.0 3.2e-16 59.0 0.0 2.4 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 gi|433638931|ref|YP_007284691.1| - 1.1e-15 57.8 2.1 1.9e-14 53.8 2.1 2.0 1 1 0 1 1 1 1 Ribosomal protein L23 PB1 PF00564.24 gi|433638931|ref|YP_007284691.1| - 0.085 12.8 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 PB1 domain Ribosomal_L4 PF00573.22 gi|433638932|ref|YP_007284692.1| - 4.2e-44 150.5 0.1 4.8e-44 150.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|433638933|ref|YP_007284693.1| - 2.1e-104 349.5 0.0 4.6e-104 348.3 0.0 1.5 1 1 0 1 1 1 1 Ribosomal protein L3 Methyltrn_RNA_3 PF02598.17 gi|433638934|ref|YP_007284694.1| - 1.2e-66 225.1 0.0 1.4e-66 224.9 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase eIF-1a PF01176.19 gi|433638934|ref|YP_007284694.1| - 0.035 13.9 0.7 0.065 13.1 0.7 1.4 1 0 0 1 1 1 0 Translation initiation factor 1A / IF-1 zinc_ribbon_2 PF13240.6 gi|433638935|ref|YP_007284695.1| - 1.4e-05 24.6 4.4 2.8e-05 23.7 4.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|433638935|ref|YP_007284695.1| - 4.8e-05 22.6 3.7 8.8e-05 21.8 3.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|433638935|ref|YP_007284695.1| - 0.00017 21.5 2.4 0.00028 20.8 2.4 1.3 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|433638935|ref|YP_007284695.1| - 0.002 18.3 0.3 0.0033 17.6 0.3 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DUF4064 PF13273.6 gi|433638935|ref|YP_007284695.1| - 0.005 17.1 1.2 0.016 15.4 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF4064) zinc_ribbon_15 PF17032.5 gi|433638935|ref|YP_007284695.1| - 0.0093 16.7 2.7 0.015 16.1 2.7 1.3 1 0 0 1 1 1 1 zinc-ribbon family HypA PF01155.19 gi|433638935|ref|YP_007284695.1| - 0.039 14.0 1.7 0.067 13.2 1.7 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nudix_N_2 PF14803.6 gi|433638935|ref|YP_007284695.1| - 0.092 12.7 2.3 1.1 9.2 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal PLAC8 PF04749.17 gi|433638935|ref|YP_007284695.1| - 0.16 13.0 0.0 0.27 12.3 0.0 1.4 1 0 0 1 1 1 0 PLAC8 family zf-NADH-PPase PF09297.11 gi|433638935|ref|YP_007284695.1| - 0.25 11.0 0.1 0.25 11.0 0.1 1.7 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain UPF0547 PF10571.9 gi|433638935|ref|YP_007284695.1| - 0.41 10.8 2.5 0.71 10.0 2.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 HscB_4_cys PF18256.1 gi|433638935|ref|YP_007284695.1| - 0.5 10.2 3.0 1.1 9.1 3.0 1.6 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif YhfH PF14149.6 gi|433638935|ref|YP_007284695.1| - 0.92 9.5 3.7 4.3 7.4 3.0 2.1 1 1 1 2 2 2 0 YhfH-like protein DUF45 PF01863.17 gi|433638936|ref|YP_007284696.1| - 3.1e-56 190.7 0.0 3.8e-56 190.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 Reprolysin_5 PF13688.6 gi|433638936|ref|YP_007284696.1| - 0.0078 16.4 0.0 0.046 13.9 0.0 2.0 1 1 0 1 1 1 1 Metallo-peptidase family M12 WLM PF08325.10 gi|433638936|ref|YP_007284696.1| - 0.04 14.0 0.2 0.077 13.1 0.2 1.4 1 0 0 1 1 1 0 WLM domain Importin_rep PF18773.1 gi|433638936|ref|YP_007284696.1| - 0.055 13.2 1.4 0.056 13.2 0.2 1.6 2 0 0 2 2 2 0 Importin 13 repeat SWI2_SNF2 PF18766.1 gi|433638937|ref|YP_007284697.1| - 9.6e-55 185.7 0.1 2.9e-54 184.1 0.0 1.9 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|433638937|ref|YP_007284697.1| - 7.9e-29 101.0 0.0 2.2e-28 99.5 0.0 1.7 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|433638937|ref|YP_007284697.1| - 2.9e-21 76.2 0.0 5.7e-21 75.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF3387 PF11867.8 gi|433638937|ref|YP_007284697.1| - 1.7e-11 44.1 0.5 3.4e-11 43.1 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) DEAD PF00270.29 gi|433638937|ref|YP_007284697.1| - 0.00025 20.9 0.0 0.0016 18.3 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|433638937|ref|YP_007284697.1| - 0.059 12.6 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DUF4157 PF13699.6 gi|433638938|ref|YP_007284698.1| - 1e-30 105.8 0.3 3.1e-30 104.2 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) RmuC PF02646.16 gi|433638938|ref|YP_007284698.1| - 0.0079 15.4 0.3 1.8 7.6 0.1 2.5 3 0 0 3 3 3 2 RmuC family DUF1269 PF06897.12 gi|433638938|ref|YP_007284698.1| - 0.008 16.4 3.7 0.016 15.5 2.0 2.4 3 0 0 3 3 3 1 Protein of unknown function (DUF1269) Peptidase_M78 PF06114.13 gi|433638938|ref|YP_007284698.1| - 0.028 14.3 0.1 0.048 13.6 0.1 1.4 1 0 0 1 1 1 0 IrrE N-terminal-like domain Gly-zipper_Omp PF13488.6 gi|433638938|ref|YP_007284698.1| - 0.051 13.6 21.4 0.14 12.2 21.5 1.7 1 1 0 1 1 1 0 Glycine zipper DUF2594 PF10769.9 gi|433638938|ref|YP_007284698.1| - 0.063 13.3 0.0 2.6 8.1 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2594) Gly-zipper_YMGG PF13441.6 gi|433638938|ref|YP_007284698.1| - 0.13 12.0 20.6 0.35 10.7 20.6 1.7 1 0 0 1 1 1 0 YMGG-like Gly-zipper DUF3482 PF11981.8 gi|433638938|ref|YP_007284698.1| - 0.65 9.3 6.1 1.1 8.5 6.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Rick_17kDa_Anti PF05433.15 gi|433638938|ref|YP_007284698.1| - 0.72 9.8 18.7 1.5 8.8 18.7 1.6 1 0 0 1 1 1 0 Glycine zipper 2TM domain Bacteriocin_IIc PF10439.9 gi|433638938|ref|YP_007284698.1| - 0.77 9.9 17.5 1.4 9.1 17.5 1.4 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide TraT PF05818.12 gi|433638938|ref|YP_007284698.1| - 2.7 7.6 4.4 4.6 6.9 4.4 1.4 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Gly-zipper_OmpA PF13436.6 gi|433638938|ref|YP_007284698.1| - 3 7.7 23.6 0.39 10.5 6.9 2.3 1 1 1 2 2 2 0 Glycine-zipper domain zinc_ribbon_9 PF14369.6 gi|433638940|ref|YP_007284700.1| - 0.12 12.7 6.1 4.3 7.7 6.1 2.2 1 1 0 1 1 1 0 zinc-ribbon Methylase_S PF01420.19 gi|433638941|ref|YP_007284701.1| - 6.5e-28 98.0 0.0 3.2e-15 56.7 0.0 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.16 gi|433638942|ref|YP_007284702.1| - 2.6e-84 283.2 0.0 3.4e-84 282.8 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|433638942|ref|YP_007284702.1| - 1.2e-22 81.0 0.0 1.2e-22 81.0 0.0 2.3 3 1 0 3 3 3 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|433638942|ref|YP_007284702.1| - 5.5e-06 26.2 0.0 1.5e-05 24.8 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 HalOD1 PF18545.1 gi|433638943|ref|YP_007284703.1| - 7.5e-21 74.2 0.1 1e-20 73.8 0.1 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 Thiamine_BP PF01910.17 gi|433638944|ref|YP_007284704.1| - 1.5e-21 76.1 0.1 1.7e-21 75.9 0.1 1.0 1 0 0 1 1 1 1 Thiamine-binding protein HMA PF00403.26 gi|433638945|ref|YP_007284705.1| - 2.3e-15 56.8 0.1 2.5e-15 56.7 0.1 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain MFS_1 PF07690.16 gi|433638946|ref|YP_007284706.1| - 3.1e-26 92.1 48.2 3.1e-26 92.1 48.2 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily TP_methylase PF00590.20 gi|433638947|ref|YP_007284707.1| - 1.1e-21 77.8 1.2 1.4e-21 77.4 1.2 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Ribonuc_L-PSP PF01042.21 gi|433638948|ref|YP_007284708.1| - 1.7e-26 92.6 0.1 2e-26 92.4 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF326 PF03860.16 gi|433638949|ref|YP_007284709.1| - 0.00097 19.0 43.5 0.013 15.5 9.0 4.8 4 1 0 4 4 4 4 Domain of Unknown Function (DUF326) DUF4872 PF16169.5 gi|433638949|ref|YP_007284709.1| - 0.3 10.8 1.4 9.2 6.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4872) Rieske PF00355.26 gi|433638950|ref|YP_007284710.1| - 3.5e-08 33.3 0.0 4.8e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Met_10 PF02475.16 gi|433638951|ref|YP_007284711.1| - 1.7e-49 168.3 0.1 2.1e-43 148.4 0.1 2.1 2 0 0 2 2 2 2 Met-10+ like-protein Trm5_N PF18093.1 gi|433638951|ref|YP_007284711.1| - 4.1e-13 49.0 0.0 1e-12 47.7 0.0 1.7 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_25 PF13649.6 gi|433638951|ref|YP_007284711.1| - 5.6e-07 30.2 0.1 1.6e-06 28.7 0.1 1.8 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433638951|ref|YP_007284711.1| - 5.8e-06 25.9 0.1 9.6e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|433638951|ref|YP_007284711.1| - 4.9e-05 23.0 0.0 8.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|433638951|ref|YP_007284711.1| - 5.5e-05 22.8 0.0 7.8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|433638951|ref|YP_007284711.1| - 6.3e-05 22.5 0.2 0.0001 21.8 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|433638951|ref|YP_007284711.1| - 0.00012 21.9 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433638951|ref|YP_007284711.1| - 0.0018 18.9 0.0 0.0045 17.6 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 gi|433638951|ref|YP_007284711.1| - 0.0029 16.9 0.2 0.0053 16.0 0.2 1.4 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase UPF0020 PF01170.18 gi|433638951|ref|YP_007284711.1| - 0.0034 17.1 0.0 0.0058 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 gi|433638951|ref|YP_007284711.1| - 0.0035 17.2 0.0 0.0087 15.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433638951|ref|YP_007284711.1| - 0.034 14.9 0.1 0.11 13.2 0.0 2.0 2 1 0 2 2 1 0 Methyltransferase domain TPMT PF05724.11 gi|433638951|ref|YP_007284711.1| - 0.046 13.4 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltr_RsmB-F PF01189.17 gi|433638951|ref|YP_007284711.1| - 0.069 12.8 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F ADH_zinc_N PF00107.26 gi|433638951|ref|YP_007284711.1| - 0.11 12.5 0.5 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 Zinc-binding dehydrogenase HalOD1 PF18545.1 gi|433638952|ref|YP_007284712.1| - 1.3e-16 60.6 0.2 3.8e-16 59.1 0.2 1.8 1 1 0 1 1 1 1 Halobacterial output domain 1 HTH_10 PF04967.12 gi|433638953|ref|YP_007284713.1| - 3.8e-17 61.8 0.1 6e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433638953|ref|YP_007284713.1| - 0.00024 21.0 0.3 0.00049 20.0 0.4 1.6 1 1 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433638953|ref|YP_007284713.1| - 0.00056 19.4 0.0 0.0013 18.2 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 CbiQ PF02361.16 gi|433638954|ref|YP_007284714.1| - 2.6e-12 46.8 8.0 8.4e-12 45.2 8.0 1.8 1 1 0 1 1 1 1 Cobalt transport protein Amastin PF07344.11 gi|433638954|ref|YP_007284714.1| - 0.0027 17.6 0.2 0.0045 16.8 0.2 1.3 1 0 0 1 1 1 1 Amastin surface glycoprotein ABC_tran PF00005.27 gi|433638955|ref|YP_007284715.1| - 2e-28 99.6 0.0 2.5e-28 99.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|433638955|ref|YP_007284715.1| - 2.1e-09 37.1 0.0 4e-09 36.2 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|433638955|ref|YP_007284715.1| - 3.6e-08 33.6 0.2 0.0001 22.3 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|433638955|ref|YP_007284715.1| - 1.6e-06 28.6 0.2 2.4e-06 28.0 0.2 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|433638955|ref|YP_007284715.1| - 5e-05 23.0 0.1 8.4e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|433638955|ref|YP_007284715.1| - 0.00023 20.9 0.3 0.00033 20.4 0.3 1.4 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|433638955|ref|YP_007284715.1| - 0.0018 18.8 0.0 0.0027 18.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|433638955|ref|YP_007284715.1| - 0.002 17.9 0.0 0.011 15.4 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 gi|433638955|ref|YP_007284715.1| - 0.0037 17.4 0.1 0.0057 16.8 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|433638955|ref|YP_007284715.1| - 0.0043 16.7 0.8 0.023 14.3 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|433638955|ref|YP_007284715.1| - 0.0046 17.2 0.0 0.0064 16.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|433638955|ref|YP_007284715.1| - 0.0051 16.7 0.0 0.015 15.2 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase cobW PF02492.19 gi|433638955|ref|YP_007284715.1| - 0.008 15.8 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 gi|433638955|ref|YP_007284715.1| - 0.0083 16.0 0.0 0.026 14.5 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_5 PF07728.14 gi|433638955|ref|YP_007284715.1| - 0.0087 16.1 0.0 0.02 14.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) SbcCD_C PF13558.6 gi|433638955|ref|YP_007284715.1| - 0.0089 16.2 0.0 0.15 12.3 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Mg_chelatase PF01078.21 gi|433638955|ref|YP_007284715.1| - 0.016 14.6 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MoeA_C PF03454.15 gi|433638955|ref|YP_007284715.1| - 0.034 14.3 0.1 0.089 13.0 0.1 1.7 1 0 0 1 1 1 0 MoeA C-terminal region (domain IV) AAA_18 PF13238.6 gi|433638955|ref|YP_007284715.1| - 0.042 14.4 0.0 0.51 10.9 0.0 2.2 2 1 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|433638955|ref|YP_007284715.1| - 0.048 13.6 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 gi|433638955|ref|YP_007284715.1| - 0.063 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_24 PF13479.6 gi|433638955|ref|YP_007284715.1| - 0.069 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|433638955|ref|YP_007284715.1| - 0.072 13.3 0.1 0.17 12.1 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|433638955|ref|YP_007284715.1| - 0.076 13.3 0.2 0.13 12.6 0.2 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|433638955|ref|YP_007284715.1| - 0.082 12.1 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain T2SSE PF00437.20 gi|433638955|ref|YP_007284715.1| - 0.083 11.9 0.0 0.17 10.9 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein RE_AccI PF09545.10 gi|433638955|ref|YP_007284715.1| - 0.12 11.3 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 AccI restriction endonuclease AAA PF00004.29 gi|433638955|ref|YP_007284715.1| - 0.18 12.2 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|433638955|ref|YP_007284715.1| - 0.18 11.8 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|433638955|ref|YP_007284715.1| - 0.19 11.7 0.0 0.32 11.0 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|433638955|ref|YP_007284715.1| - 0.24 10.9 0.0 0.39 10.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region BioY PF02632.14 gi|433638956|ref|YP_007284716.1| - 2.5e-32 111.8 18.7 3.9e-32 111.1 18.7 1.3 1 0 0 1 1 1 1 BioY family ECF_trnsprt PF12822.7 gi|433638956|ref|YP_007284716.1| - 2.1 8.4 20.3 5.3 7.1 20.3 1.6 1 1 0 1 1 1 0 ECF transporter, substrate-specific component OsmC PF02566.19 gi|433638959|ref|YP_007284719.1| - 1.2e-10 41.7 0.0 1.5e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein Lactamase_B_3 PF13483.6 gi|433638960|ref|YP_007284720.1| - 3.2e-20 72.7 0.1 4.1e-20 72.3 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|433638960|ref|YP_007284720.1| - 7.9e-15 54.9 1.9 1e-14 54.5 1.9 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433638960|ref|YP_007284720.1| - 3.1e-08 33.9 3.8 3.1e-08 33.9 3.8 2.1 1 1 1 2 2 2 1 Metallo-beta-lactamase superfamily Ribosomal_L12_N PF16320.5 gi|433638960|ref|YP_007284720.1| - 0.043 13.5 0.1 0.093 12.5 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain tRNA_anti-codon PF01336.25 gi|433638962|ref|YP_007284722.1| - 3.4e-10 39.8 0.1 7.7e-10 38.6 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|433638962|ref|YP_007284722.1| - 2.9e-08 33.9 0.0 1.2e-07 32.0 0.0 2.1 1 0 0 1 1 1 1 S1 RNA binding domain tRNA_anti_2 PF13742.6 gi|433638962|ref|YP_007284722.1| - 0.00011 22.4 0.0 0.00025 21.2 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Radical_SAM_C PF16199.5 gi|433638963|ref|YP_007284723.1| - 5.8e-26 90.3 0.0 1.2e-25 89.3 0.0 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|433638963|ref|YP_007284723.1| - 8.1e-26 91.4 0.0 1.6e-25 90.4 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|433638963|ref|YP_007284723.1| - 5.1e-07 29.9 0.0 1.5e-06 28.5 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433638963|ref|YP_007284723.1| - 4.3e-05 23.5 0.2 9.2e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433638963|ref|YP_007284723.1| - 0.1 13.0 0.8 0.23 11.9 0.8 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FbpA PF05833.11 gi|433638964|ref|YP_007284724.1| - 1.6e-82 277.7 0.0 1e-55 189.3 0.0 2.0 2 0 0 2 2 2 2 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|433638964|ref|YP_007284724.1| - 2.5e-20 73.2 0.0 4.7e-20 72.2 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|433638964|ref|YP_007284724.1| - 0.0035 17.5 0.0 0.012 15.8 0.0 1.8 1 1 0 1 1 1 1 NFACT protein RNA binding domain Peptidase_C27 PF05407.12 gi|433638964|ref|YP_007284724.1| - 0.13 12.4 0.2 0.13 12.4 0.2 2.5 2 0 0 2 2 2 0 Rubella virus endopeptidase eRF1_3 PF03465.15 gi|433638965|ref|YP_007284725.1| - 3e-24 85.7 0.0 1.1e-23 83.9 0.0 2.0 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|433638965|ref|YP_007284725.1| - 3.9e-23 81.9 0.0 7.9e-23 80.9 0.0 1.5 2 0 0 2 2 2 1 eRF1 domain 1 eRF1_2 PF03464.15 gi|433638965|ref|YP_007284725.1| - 5.8e-09 36.4 0.1 2.8e-07 30.9 0.1 2.4 1 1 0 1 1 1 1 eRF1 domain 2 FG-GAP PF01839.23 gi|433638966|ref|YP_007284726.1| - 7e-18 64.4 70.9 3e-07 30.5 4.4 7.7 7 1 0 7 7 7 5 FG-GAP repeat FG-GAP_2 PF14312.6 gi|433638966|ref|YP_007284726.1| - 1.3e-10 41.3 60.1 0.012 15.9 1.5 8.2 7 1 0 7 7 7 6 FG-GAP repeat DUF1735 PF08522.10 gi|433638966|ref|YP_007284726.1| - 0.0016 19.0 17.6 0.53 10.9 1.1 5.4 3 2 2 6 6 6 3 Domain of unknown function (DUF1735) MliC PF09864.9 gi|433638966|ref|YP_007284726.1| - 0.024 14.6 3.5 23 5.0 0.1 5.0 4 0 0 4 4 4 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme Glyco_hydro_30C PF17189.4 gi|433638966|ref|YP_007284726.1| - 0.13 12.5 5.5 25 5.2 0.0 4.4 4 0 0 4 4 4 0 Glycosyl hydrolase family 30 beta sandwich domain Rep_fac-A_3 PF08661.11 gi|433638966|ref|YP_007284726.1| - 0.13 12.6 1.8 35 4.8 0.1 3.8 3 0 0 3 3 3 0 Replication factor A protein 3 VIT_2 PF13757.6 gi|433638966|ref|YP_007284726.1| - 0.16 11.9 1.6 41 4.1 0.1 3.7 3 0 0 3 3 3 0 Vault protein inter-alpha-trypsin domain Lactamase_B_2 PF12706.7 gi|433638967|ref|YP_007284727.1| - 1.9e-20 73.3 0.2 2.3e-20 73.0 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433638967|ref|YP_007284727.1| - 7e-13 49.0 2.6 1.4e-12 48.0 2.6 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|433638967|ref|YP_007284727.1| - 0.002 17.7 0.0 0.0097 15.6 0.0 2.0 2 0 0 2 2 2 1 tRNase Z endonuclease Lactamase_B_3 PF13483.6 gi|433638967|ref|YP_007284727.1| - 0.065 13.1 0.2 0.11 12.4 0.2 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain HHH_5 PF14520.6 gi|433638969|ref|YP_007284729.1| - 2.4e-09 37.6 0.0 0.0011 19.6 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|433638969|ref|YP_007284729.1| - 3e-06 27.4 0.0 0.14 12.4 0.0 2.4 2 0 0 2 2 2 2 Pathogenicity locus DUF4332 PF14229.6 gi|433638969|ref|YP_007284729.1| - 3.7e-06 27.2 0.1 0.053 13.8 0.0 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.9 gi|433638969|ref|YP_007284729.1| - 3.3e-05 23.6 0.0 0.036 13.9 0.0 3.0 3 0 0 3 3 3 2 Fingers domain of DNA polymerase lambda RNA_pol_A_CTD PF03118.15 gi|433638969|ref|YP_007284729.1| - 0.0035 17.1 0.0 0.76 9.6 0.0 2.3 2 0 0 2 2 2 2 Bacterial RNA polymerase, alpha chain C terminal domain Nitro_FeMo-Co PF02579.17 gi|433638969|ref|YP_007284729.1| - 0.01 16.1 0.0 3.9 7.9 0.0 2.6 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor SBD_N PF07005.11 gi|433638969|ref|YP_007284729.1| - 0.014 15.2 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-binding N-terminal domain BAF PF02961.14 gi|433638969|ref|YP_007284729.1| - 0.016 15.7 0.0 6.2 7.3 0.0 2.3 2 0 0 2 2 2 0 Barrier to autointegration factor DUF2589 PF11655.8 gi|433638970|ref|YP_007284730.1| - 1.1e-14 55.0 0.0 1.7e-14 54.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2589) DUF2589 PF11655.8 gi|433638971|ref|YP_007284731.1| - 3.5e-21 76.1 0.0 4.3e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2589) Glug PF07581.12 gi|433638971|ref|YP_007284731.1| - 3.6 8.2 9.2 53 4.5 7.7 2.7 2 0 0 2 2 2 0 The GLUG motif DEAD_assoc PF08494.11 gi|433638972|ref|YP_007284732.1| - 6.1e-49 166.4 0.2 1.6e-48 165.0 0.2 1.8 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|433638972|ref|YP_007284732.1| - 3e-28 98.8 0.0 6.3e-28 97.7 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|433638972|ref|YP_007284732.1| - 3e-17 62.9 0.0 8.1e-15 55.1 0.0 2.9 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|433638972|ref|YP_007284732.1| - 4.1e-06 26.9 0.0 8.5e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|433638972|ref|YP_007284732.1| - 0.00057 20.2 0.0 0.0042 17.4 0.0 2.4 1 1 0 1 1 1 1 AAA domain GLTSCR1 PF15249.6 gi|433638972|ref|YP_007284732.1| - 0.082 13.3 0.4 1.9 9.0 0.0 3.0 3 1 0 3 3 3 0 Conserved region of unknown function on GLTSCR protein AAA_19 PF13245.6 gi|433638972|ref|YP_007284732.1| - 0.18 12.2 0.0 0.49 10.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain Exonuc_VII_S PF02609.16 gi|433638972|ref|YP_007284732.1| - 0.26 11.4 1.2 0.63 10.2 0.1 2.2 2 0 0 2 2 2 0 Exonuclease VII small subunit 4HBT PF03061.22 gi|433638973|ref|YP_007284733.1| - 2.9e-12 46.7 1.0 4.4e-12 46.2 1.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|433638973|ref|YP_007284733.1| - 5.9e-12 46.2 0.0 6.9e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|433638973|ref|YP_007284733.1| - 0.00012 21.4 0.0 0.00014 21.3 0.0 1.2 1 1 0 1 1 1 1 Acyl-ACP thioesterase AIRS_C PF02769.22 gi|433638974|ref|YP_007284734.1| - 4.6e-24 85.3 2.3 8.8e-24 84.4 2.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|433638974|ref|YP_007284734.1| - 2e-16 60.4 2.5 2e-16 60.4 2.5 2.0 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain PASTA PF03793.19 gi|433638974|ref|YP_007284734.1| - 0.03 14.2 0.3 1.5 8.7 0.1 2.7 3 0 0 3 3 3 0 PASTA domain Phlebovirus_G2 PF07245.11 gi|433638974|ref|YP_007284734.1| - 0.096 11.2 0.0 0.13 10.7 0.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G2 Pilin_N PF07790.11 gi|433638975|ref|YP_007284735.1| - 3.8e-10 40.6 0.0 7.5e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal AAA_12 PF13087.6 gi|433638976|ref|YP_007284736.1| - 1.3e-38 132.7 0.0 1.8e-38 132.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|433638976|ref|YP_007284736.1| - 7.1e-37 127.6 0.1 2e-19 70.4 0.2 2.5 1 1 1 2 2 2 2 AAA domain Dna2 PF08696.11 gi|433638976|ref|YP_007284736.1| - 3.8e-20 72.6 0.0 3.3e-18 66.2 0.0 2.2 1 1 0 1 1 1 1 DNA replication factor Dna2 AAA_30 PF13604.6 gi|433638976|ref|YP_007284736.1| - 1.1e-17 64.4 0.1 1.1e-17 64.4 0.1 3.1 3 0 0 3 3 3 1 AAA domain PDDEXK_1 PF12705.7 gi|433638976|ref|YP_007284736.1| - 1.3e-15 58.0 0.7 3.9e-15 56.5 0.0 2.0 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily AAA_19 PF13245.6 gi|433638976|ref|YP_007284736.1| - 2.9e-14 53.7 0.0 8e-14 52.2 0.0 1.8 2 0 0 2 2 1 1 AAA domain Cas_Cas4 PF01930.17 gi|433638976|ref|YP_007284736.1| - 7.2e-06 26.2 0.0 4e-05 23.8 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function DUF83 UvrD-helicase PF00580.21 gi|433638976|ref|YP_007284736.1| - 3.7e-05 23.4 0.0 7e-05 22.5 0.0 1.5 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain Viral_helicase1 PF01443.18 gi|433638976|ref|YP_007284736.1| - 9.8e-05 22.2 0.0 0.044 13.5 0.0 2.9 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase ResIII PF04851.15 gi|433638976|ref|YP_007284736.1| - 0.00098 19.2 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_RecD PF05127.14 gi|433638976|ref|YP_007284736.1| - 0.0014 18.5 0.1 0.0037 17.1 0.1 1.8 1 1 0 1 1 1 1 Helicase AAA_22 PF13401.6 gi|433638976|ref|YP_007284736.1| - 0.0015 18.8 0.0 0.014 15.6 0.0 2.7 3 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|433638976|ref|YP_007284736.1| - 0.0039 17.6 0.8 0.029 14.8 0.8 2.7 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 gi|433638976|ref|YP_007284736.1| - 0.0063 15.6 0.0 0.015 14.3 0.0 1.7 1 0 0 1 1 1 1 Type II/IV secretion system protein DUF2075 PF09848.9 gi|433638976|ref|YP_007284736.1| - 0.0081 15.4 0.0 0.026 13.8 0.0 1.8 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 gi|433638976|ref|YP_007284736.1| - 0.025 15.0 0.0 0.093 13.2 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|433638976|ref|YP_007284736.1| - 0.075 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 gi|433638976|ref|YP_007284736.1| - 0.08 12.4 0.0 0.23 10.9 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region UvrD_C_2 PF13538.6 gi|433638976|ref|YP_007284736.1| - 0.094 12.6 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain PhoH PF02562.16 gi|433638976|ref|YP_007284736.1| - 0.1 12.0 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein TFIIS_C PF01096.18 gi|433638977|ref|YP_007284737.1| - 1.4e-16 60.1 5.3 1.4e-16 60.1 5.3 3.0 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|433638977|ref|YP_007284737.1| - 2.6e-08 33.6 8.5 5.2e-07 29.4 1.3 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit OrfB_Zn_ribbon PF07282.11 gi|433638977|ref|YP_007284737.1| - 4.3e-06 26.6 11.4 0.00039 20.3 1.6 2.6 2 1 0 2 2 2 2 Putative transposase DNA-binding domain DZR PF12773.7 gi|433638977|ref|YP_007284737.1| - 7.8e-05 22.6 11.8 0.00062 19.7 1.2 2.9 2 1 0 2 2 2 1 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|433638977|ref|YP_007284737.1| - 0.0012 18.8 10.6 0.36 10.8 0.5 3.6 3 1 0 3 3 3 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|433638977|ref|YP_007284737.1| - 0.0022 17.3 12.1 0.022 14.1 0.8 3.3 3 0 0 3 3 3 1 zinc-ribbon domain Prok-RING_1 PF14446.6 gi|433638977|ref|YP_007284737.1| - 0.006 16.5 10.0 0.0072 16.2 1.4 3.0 3 0 0 3 3 3 1 Prokaryotic RING finger family 1 zf-RING_7 PF02591.15 gi|433638977|ref|YP_007284737.1| - 0.0084 16.3 8.7 4.5 7.6 1.7 4.0 3 1 0 3 3 3 1 C4-type zinc ribbon domain HypA PF01155.19 gi|433638977|ref|YP_007284737.1| - 0.012 15.6 8.8 0.14 12.2 0.9 2.4 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 gi|433638977|ref|YP_007284737.1| - 0.015 15.2 0.6 0.015 15.2 0.6 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|433638977|ref|YP_007284737.1| - 0.021 14.5 9.3 1.6 8.5 0.1 3.7 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|433638977|ref|YP_007284737.1| - 0.028 14.0 15.3 0.91 9.2 0.2 4.2 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger C1_1 PF00130.22 gi|433638977|ref|YP_007284737.1| - 0.039 13.9 8.1 0.076 12.9 0.3 2.9 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc-ribbons_6 PF07191.12 gi|433638977|ref|YP_007284737.1| - 0.04 13.9 1.5 0.04 13.9 1.5 2.6 2 1 0 2 2 2 0 zinc-ribbons zf-RRN7 PF11781.8 gi|433638977|ref|YP_007284737.1| - 0.047 13.4 8.7 15 5.3 0.2 4.1 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TackOD1 PF18551.1 gi|433638977|ref|YP_007284737.1| - 0.16 11.6 5.8 1.1 9.0 0.9 2.2 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zinc_ribbon_2 PF13240.6 gi|433638977|ref|YP_007284737.1| - 0.18 11.6 14.3 8 6.3 1.1 4.1 3 1 0 4 4 4 0 zinc-ribbon domain zf-ACC PF17848.1 gi|433638977|ref|YP_007284737.1| - 0.33 11.1 13.6 7.2 6.8 0.3 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain Nudix_N_2 PF14803.6 gi|433638977|ref|YP_007284737.1| - 0.38 10.7 16.3 2.5 8.1 4.7 3.9 2 2 1 3 3 3 0 Nudix N-terminal DUF2318 PF10080.9 gi|433638977|ref|YP_007284737.1| - 0.46 10.6 9.6 0.27 11.4 1.8 2.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) ADK_lid PF05191.14 gi|433638977|ref|YP_007284737.1| - 0.49 10.4 10.6 21 5.2 0.2 3.9 3 1 0 3 3 3 0 Adenylate kinase, active site lid TF_Zn_Ribbon PF08271.12 gi|433638977|ref|YP_007284737.1| - 0.53 9.8 14.5 14 5.3 0.0 4.3 2 1 1 3 3 3 0 TFIIB zinc-binding PHD PF00628.29 gi|433638977|ref|YP_007284737.1| - 0.6 10.1 11.7 1.8 8.5 2.1 2.6 2 1 0 2 2 2 0 PHD-finger Zn-ribbon_8 PF09723.10 gi|433638977|ref|YP_007284737.1| - 0.62 10.2 15.8 8.2 6.6 0.7 3.8 2 2 0 2 2 2 0 Zinc ribbon domain Mut7-C PF01927.16 gi|433638977|ref|YP_007284737.1| - 0.69 10.0 4.7 1.2 9.2 4.5 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain C1_2 PF03107.16 gi|433638977|ref|YP_007284737.1| - 0.7 10.3 11.0 2.4 8.5 0.7 3.1 2 1 0 2 2 2 0 C1 domain zf-RING_5 PF14634.6 gi|433638977|ref|YP_007284737.1| - 1.2 9.2 11.1 1.2 9.2 1.7 2.8 2 1 0 2 2 2 0 zinc-RING finger domain Rubredoxin_2 PF18073.1 gi|433638977|ref|YP_007284737.1| - 1.3 8.8 14.4 5 6.9 0.5 4.0 4 0 0 4 4 4 0 Rubredoxin metal binding domain Rpr2 PF04032.16 gi|433638977|ref|YP_007284737.1| - 1.5 9.2 4.5 6.2 7.2 2.7 2.7 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Cytochrom_CIII PF02085.16 gi|433638977|ref|YP_007284737.1| - 3.2 8.1 7.9 22 5.5 3.0 2.8 1 1 1 2 2 2 0 Class III cytochrome C family Lar_restr_allev PF14354.6 gi|433638977|ref|YP_007284737.1| - 3.3 8.2 14.0 2.7 8.5 0.2 3.1 1 1 2 3 3 3 0 Restriction alleviation protein Lar zf-IS66 PF13005.7 gi|433638977|ref|YP_007284737.1| - 3.7 8.0 12.4 18 5.8 3.5 4.0 3 1 0 3 3 3 0 zinc-finger binding domain of transposase IS66 SIR2 PF02146.17 gi|433638977|ref|YP_007284737.1| - 4.5 7.2 5.7 18 5.2 2.6 2.7 1 1 1 2 2 2 0 Sir2 family Zn_ribbon_recom PF13408.6 gi|433638977|ref|YP_007284737.1| - 6.3 7.4 9.2 28 5.3 0.2 3.4 3 1 0 3 3 3 0 Recombinase zinc beta ribbon domain HypA PF01155.19 gi|433638979|ref|YP_007284739.1| - 0.009 16.0 0.2 0.027 14.5 0.2 1.8 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|433638979|ref|YP_007284739.1| - 0.021 14.6 0.4 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|433638979|ref|YP_007284739.1| - 0.027 13.9 1.7 0.59 9.6 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433638979|ref|YP_007284739.1| - 0.037 14.1 0.4 0.078 13.1 0.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain DUF35_N PF12172.8 gi|433638979|ref|YP_007284739.1| - 0.057 13.3 1.4 3.2 7.7 0.1 3.1 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) RHH_1 PF01402.21 gi|433638979|ref|YP_007284739.1| - 0.075 13.0 3.8 2 8.4 0.0 3.9 4 0 0 4 4 4 0 Ribbon-helix-helix protein, copG family DZR PF12773.7 gi|433638979|ref|YP_007284739.1| - 0.084 12.9 0.3 0.17 11.9 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon FlaC_arch PF05377.11 gi|433638979|ref|YP_007284739.1| - 0.086 13.2 0.8 2.4 8.6 0.1 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Baculo_PEP_C PF04513.12 gi|433638979|ref|YP_007284739.1| - 0.087 12.9 1.5 0.14 12.2 0.6 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus zf_UBZ PF18439.1 gi|433638979|ref|YP_007284739.1| - 0.13 11.9 0.6 2.8 7.6 0.1 2.5 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger TPR_MLP1_2 PF07926.12 gi|433638979|ref|YP_007284739.1| - 0.13 12.3 3.5 1.6 8.8 1.5 2.3 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Acyl-CoA_dh_C PF12806.7 gi|433638979|ref|YP_007284739.1| - 0.16 12.2 1.8 0.43 10.8 0.8 2.2 1 1 1 2 2 2 0 Acetyl-CoA dehydrogenase C-terminal like DUF2205 PF10224.9 gi|433638979|ref|YP_007284739.1| - 0.18 11.9 1.5 5.9 7.0 0.1 2.7 2 0 0 2 2 2 0 Short coiled-coil protein DUF4088 PF13317.6 gi|433638979|ref|YP_007284739.1| - 0.28 10.7 5.2 0.22 11.0 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4088) DUF1664 PF07889.12 gi|433638979|ref|YP_007284739.1| - 0.56 10.3 2.9 2.1 8.4 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|433638979|ref|YP_007284739.1| - 1.4 7.8 6.5 1.7 7.4 1.6 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein PMC2NT PF08066.12 gi|433638979|ref|YP_007284739.1| - 4.8 7.9 7.6 8.1 7.2 4.0 2.8 1 1 2 3 3 3 0 PMC2NT (NUC016) domain ATPase PF06745.13 gi|433638980|ref|YP_007284740.1| - 3.6e-06 26.5 0.0 0.0022 17.4 0.0 2.2 2 0 0 2 2 2 2 KaiC Rad51 PF08423.11 gi|433638980|ref|YP_007284740.1| - 0.00064 19.1 0.0 0.0031 16.8 0.0 1.9 2 0 0 2 2 2 1 Rad51 AAA_25 PF13481.6 gi|433638980|ref|YP_007284740.1| - 0.0014 18.2 0.3 0.21 11.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain GHMP_kinases_N PF00288.26 gi|433638981|ref|YP_007284741.1| - 1.6e-06 28.2 0.2 3.2e-06 27.3 0.2 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|433638981|ref|YP_007284741.1| - 0.006 16.9 0.0 0.013 15.9 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal DUF3701 PF12482.8 gi|433638981|ref|YP_007284741.1| - 0.0087 16.1 0.0 0.022 14.9 0.0 1.6 1 0 0 1 1 1 1 Phage integrase protein DUF460 PF04312.13 gi|433638982|ref|YP_007284742.1| - 0.025 14.3 0.9 0.074 12.7 0.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF460) HTH_35 PF13693.6 gi|433638982|ref|YP_007284742.1| - 0.15 12.1 0.0 0.72 9.9 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MMPL PF03176.15 gi|433638983|ref|YP_007284743.1| - 1.8e-32 112.6 50.9 5.3e-18 65.0 23.0 3.7 2 2 0 2 2 2 2 MMPL family Patched PF02460.18 gi|433638983|ref|YP_007284743.1| - 1.9e-07 29.6 27.6 3.8e-05 22.0 6.1 3.0 2 1 1 3 3 3 3 Patched family Sterol-sensing PF12349.8 gi|433638983|ref|YP_007284743.1| - 2.1e-05 24.4 17.3 0.00079 19.3 2.1 2.9 3 0 0 3 3 3 2 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.16 gi|433638983|ref|YP_007284743.1| - 9.8e-05 21.8 24.8 0.0008 18.8 4.0 2.7 2 0 0 2 2 2 2 Protein export membrane protein DivIC PF04977.15 gi|433638983|ref|YP_007284743.1| - 0.36 10.6 7.2 1.9 8.3 0.8 2.9 3 0 0 3 3 3 0 Septum formation initiator ZapB PF06005.12 gi|433638983|ref|YP_007284743.1| - 0.99 9.9 8.4 8 7.0 2.6 2.5 2 0 0 2 2 2 0 Cell division protein ZapB DUF4140 PF13600.6 gi|433638983|ref|YP_007284743.1| - 4.5 7.8 6.7 5.2 7.6 1.6 2.7 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) TetR_C_6 PF13977.6 gi|433638984|ref|YP_007284744.1| - 9.7e-12 45.1 0.4 1.5e-11 44.5 0.4 1.3 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 gi|433638984|ref|YP_007284744.1| - 6.4e-09 35.5 0.0 1.1e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 gi|433638984|ref|YP_007284744.1| - 0.00046 20.4 0.1 0.00087 19.5 0.1 1.5 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_27 PF17935.1 gi|433638984|ref|YP_007284744.1| - 0.0014 18.6 0.3 0.0059 16.6 0.1 2.2 3 0 0 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|433638984|ref|YP_007284744.1| - 0.044 14.1 0.1 0.12 12.6 0.1 1.8 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|433638984|ref|YP_007284744.1| - 0.078 13.1 0.0 0.25 11.5 0.0 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain AAA PF00004.29 gi|433638985|ref|YP_007284745.1| - 5.7e-100 330.9 0.0 3.8e-49 166.5 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|433638985|ref|YP_007284745.1| - 1e-30 105.7 0.0 4.8e-30 103.6 0.1 2.1 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|433638985|ref|YP_007284745.1| - 5.1e-27 93.4 3.7 1.7e-12 46.9 0.1 2.5 2 0 0 2 2 2 2 AAA+ lid domain RuvB_N PF05496.12 gi|433638985|ref|YP_007284745.1| - 4.6e-15 55.7 0.0 8.9e-07 28.8 0.0 2.8 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain CDC48_2 PF02933.17 gi|433638985|ref|YP_007284745.1| - 5.3e-15 54.9 0.2 4.5e-14 52.0 0.2 2.4 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 gi|433638985|ref|YP_007284745.1| - 8.5e-14 52.3 3.2 7.2e-06 26.5 0.3 4.4 3 2 1 4 4 3 2 AAA ATPase domain AAA_5 PF07728.14 gi|433638985|ref|YP_007284745.1| - 2.2e-13 50.4 1.2 4.1e-05 23.6 0.0 4.0 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|433638985|ref|YP_007284745.1| - 6.7e-13 49.1 0.0 1.5e-05 25.2 0.0 2.8 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|433638985|ref|YP_007284745.1| - 1.4e-11 44.8 0.6 0.011 16.0 0.0 4.2 2 2 1 4 4 4 2 AAA domain TIP49 PF06068.13 gi|433638985|ref|YP_007284745.1| - 8.8e-11 41.6 0.0 0.00038 19.8 0.0 3.3 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|433638985|ref|YP_007284745.1| - 1.2e-10 41.8 0.0 6.9e-05 23.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|433638985|ref|YP_007284745.1| - 8.5e-08 32.1 0.0 0.017 14.9 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.6 gi|433638985|ref|YP_007284745.1| - 1.2e-07 31.8 0.0 0.0073 16.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|433638985|ref|YP_007284745.1| - 6.9e-07 29.6 0.0 0.061 13.7 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_18 PF13238.6 gi|433638985|ref|YP_007284745.1| - 8.9e-07 29.5 0.0 0.085 13.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|433638985|ref|YP_007284745.1| - 1.4e-06 27.9 0.1 0.054 12.9 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 gi|433638985|ref|YP_007284745.1| - 1.8e-06 27.6 1.7 2.1 7.9 0.0 4.5 4 0 0 4 4 4 1 AAA domain Sigma54_activat PF00158.26 gi|433638985|ref|YP_007284745.1| - 5.4e-06 26.2 0.1 0.15 11.7 0.0 3.2 3 1 0 3 3 2 2 Sigma-54 interaction domain AAA_7 PF12775.7 gi|433638985|ref|YP_007284745.1| - 5.5e-06 26.0 0.0 0.12 11.8 0.0 2.5 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_28 PF13521.6 gi|433638985|ref|YP_007284745.1| - 8.9e-06 26.0 0.0 0.034 14.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|433638985|ref|YP_007284745.1| - 1.3e-05 24.6 0.4 0.5 9.7 0.0 3.4 3 0 0 3 3 3 2 KaiC AAA_3 PF07726.11 gi|433638985|ref|YP_007284745.1| - 1.4e-05 24.9 0.0 0.17 11.7 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|433638985|ref|YP_007284745.1| - 2.4e-05 24.3 0.0 0.17 11.8 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|433638985|ref|YP_007284745.1| - 4.4e-05 23.3 0.0 0.13 12.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|433638985|ref|YP_007284745.1| - 4.8e-05 22.9 0.3 0.44 10.0 0.0 3.1 3 0 0 3 3 3 2 PhoH-like protein DUF815 PF05673.13 gi|433638985|ref|YP_007284745.1| - 5.5e-05 22.5 0.0 0.19 10.8 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ABC_tran PF00005.27 gi|433638985|ref|YP_007284745.1| - 7.7e-05 23.2 0.0 0.52 10.8 0.0 2.7 2 0 0 2 2 2 2 ABC transporter AAA_11 PF13086.6 gi|433638985|ref|YP_007284745.1| - 8.5e-05 22.5 0.0 0.3 10.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|433638985|ref|YP_007284745.1| - 9.2e-05 22.2 0.7 0.51 10.0 0.0 3.0 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.22 gi|433638985|ref|YP_007284745.1| - 0.00014 21.1 0.0 0.12 11.5 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain ATPase_2 PF01637.18 gi|433638985|ref|YP_007284745.1| - 0.00017 21.6 0.0 1 9.2 0.0 3.7 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea Vps4_C PF09336.10 gi|433638985|ref|YP_007284745.1| - 0.00017 21.5 0.5 0.009 16.0 0.0 2.9 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain DUF2075 PF09848.9 gi|433638985|ref|YP_007284745.1| - 0.00036 19.9 0.0 0.4 9.9 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 gi|433638985|ref|YP_007284745.1| - 0.00043 19.5 0.2 0.51 9.4 0.1 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_17 PF13207.6 gi|433638985|ref|YP_007284745.1| - 0.00043 20.7 0.0 1 9.8 0.0 3.4 3 0 0 3 3 3 1 AAA domain NACHT PF05729.12 gi|433638985|ref|YP_007284745.1| - 0.0005 20.0 0.2 0.57 10.1 0.0 3.0 3 0 0 3 3 2 1 NACHT domain Zeta_toxin PF06414.12 gi|433638985|ref|YP_007284745.1| - 0.00065 19.0 0.4 0.98 8.7 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin Sigma54_activ_2 PF14532.6 gi|433638985|ref|YP_007284745.1| - 0.0012 18.9 0.0 2.4 8.2 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain IPT PF01745.16 gi|433638985|ref|YP_007284745.1| - 0.0018 17.7 0.9 0.54 9.6 0.0 2.8 3 0 0 3 3 3 1 Isopentenyl transferase NTPase_1 PF03266.15 gi|433638985|ref|YP_007284745.1| - 0.0027 17.7 0.2 2.9 7.8 0.1 3.0 2 1 0 2 2 2 1 NTPase AAA_19 PF13245.6 gi|433638985|ref|YP_007284745.1| - 0.0032 17.8 0.9 4.4 7.6 0.0 2.9 2 1 1 3 3 2 0 AAA domain Bac_DnaA PF00308.18 gi|433638985|ref|YP_007284745.1| - 0.0063 16.4 0.0 4 7.2 0.0 2.6 2 0 0 2 2 2 0 Bacterial dnaA protein Cytidylate_kin PF02224.18 gi|433638985|ref|YP_007284745.1| - 0.0076 16.0 0.1 4.4 7.0 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase KAP_NTPase PF07693.14 gi|433638985|ref|YP_007284745.1| - 0.0097 15.2 0.1 1.8 7.7 0.0 2.9 2 2 1 4 4 4 1 KAP family P-loop domain Viral_helicase1 PF01443.18 gi|433638985|ref|YP_007284745.1| - 0.016 15.0 0.0 1.2 8.8 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase ResIII PF04851.15 gi|433638985|ref|YP_007284745.1| - 0.024 14.7 0.0 9 6.3 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Torsin PF06309.11 gi|433638985|ref|YP_007284745.1| - 0.036 14.2 0.0 4.6 7.4 0.0 2.3 2 0 0 2 2 2 0 Torsin Hydin_ADK PF17213.3 gi|433638985|ref|YP_007284745.1| - 0.039 14.2 0.0 4.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain CPT PF07931.12 gi|433638985|ref|YP_007284745.1| - 0.047 13.5 0.0 3.8 7.3 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 gi|433638985|ref|YP_007284745.1| - 0.049 13.8 0.0 11 6.1 0.0 2.4 2 0 0 2 2 2 0 Shikimate kinase Rad17 PF03215.15 gi|433638985|ref|YP_007284745.1| - 0.053 13.4 0.0 11 5.9 0.0 2.6 2 1 0 2 2 2 0 Rad17 P-loop domain Zot PF05707.12 gi|433638985|ref|YP_007284745.1| - 0.054 13.1 0.0 6.2 6.4 0.0 2.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) Cytidylate_kin2 PF13189.6 gi|433638985|ref|YP_007284745.1| - 0.074 13.2 0.0 7 6.7 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase-like family AFG1_ATPase PF03969.16 gi|433638985|ref|YP_007284745.1| - 0.076 11.9 0.0 1.8 7.4 0.0 2.2 2 0 0 2 2 2 0 AFG1-like ATPase Guanylate_kin PF00625.21 gi|433638985|ref|YP_007284745.1| - 0.22 11.2 0.5 68 3.1 0.0 3.4 3 1 1 4 4 3 0 Guanylate kinase EamA PF00892.20 gi|433638986|ref|YP_007284746.1| - 9.9e-37 126.2 29.9 8.7e-19 68.1 9.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family Phage_holin_2_3 PF16080.5 gi|433638986|ref|YP_007284746.1| - 0.56 10.0 2.9 0.52 10.1 0.2 2.4 2 0 0 2 2 2 0 Bacteriophage holin family HP1 ABC_tran PF00005.27 gi|433638987|ref|YP_007284747.1| - 1.1e-24 87.5 0.0 4e-11 43.6 0.0 2.7 3 0 0 3 3 3 2 ABC transporter oligo_HPY PF08352.12 gi|433638987|ref|YP_007284747.1| - 3e-18 66.1 0.1 6.4e-18 65.0 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433638987|ref|YP_007284747.1| - 8.6e-08 32.3 3.3 0.00016 21.6 0.4 2.9 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433638987|ref|YP_007284747.1| - 0.00024 20.6 0.1 0.0065 15.9 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|433638987|ref|YP_007284747.1| - 0.011 16.0 0.1 0.74 10.1 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|433638987|ref|YP_007284747.1| - 0.027 14.2 0.2 0.061 13.1 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Y_phosphatase3 PF13350.6 gi|433638987|ref|YP_007284747.1| - 0.029 14.3 0.1 0.049 13.6 0.1 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family AIG1 PF04548.16 gi|433638987|ref|YP_007284747.1| - 0.22 10.8 2.4 0.18 11.1 0.2 1.8 2 0 0 2 2 2 0 AIG1 family ABC_tran PF00005.27 gi|433638988|ref|YP_007284748.1| - 3.9e-23 82.5 0.0 6.6e-23 81.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433638988|ref|YP_007284748.1| - 5.4e-19 68.5 0.0 9.5e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433638988|ref|YP_007284748.1| - 2.6e-06 27.5 0.0 5.3e-05 23.2 0.0 2.4 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|433638988|ref|YP_007284748.1| - 0.00028 21.2 0.1 0.064 13.5 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433638988|ref|YP_007284748.1| - 0.11 12.8 0.0 0.66 10.3 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain BPD_transp_1 PF00528.22 gi|433638989|ref|YP_007284749.1| - 1.6e-29 102.9 8.8 1.6e-29 102.9 8.8 2.0 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|433638989|ref|YP_007284749.1| - 0.0041 17.1 0.1 0.0041 17.1 0.1 3.8 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|433638990|ref|YP_007284750.1| - 7.8e-40 136.6 13.4 1.3e-39 135.8 13.4 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|433638991|ref|YP_007284751.1| - 4.6e-67 226.6 0.2 2.2e-66 224.3 0.6 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle RVT_3 PF13456.6 gi|433638992|ref|YP_007284752.1| - 0.00012 21.9 0.0 0.0002 21.2 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|433638992|ref|YP_007284752.1| - 0.0042 17.3 0.0 0.005 17.0 0.0 1.2 1 0 0 1 1 1 1 RNase H PAP2 PF01569.21 gi|433638993|ref|YP_007284753.1| - 3.2e-15 56.1 4.9 3.2e-15 56.1 4.9 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|433638993|ref|YP_007284753.1| - 3.6e-07 30.1 11.4 1.5e-06 28.0 11.4 2.1 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 gi|433638993|ref|YP_007284753.1| - 0.056 14.0 0.4 0.14 12.7 0.4 1.6 1 0 0 1 1 1 0 PAP2 superfamily C-terminal Xan_ur_permease PF00860.20 gi|433638994|ref|YP_007284754.1| - 3.1e-29 101.9 43.3 1.6e-27 96.2 43.3 2.1 1 1 0 1 1 1 1 Permease family GST_N_3 PF13417.6 gi|433638995|ref|YP_007284755.1| - 1.3e-14 54.4 0.0 1.6e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 gi|433638995|ref|YP_007284755.1| - 6.6e-14 51.9 0.0 9.7e-14 51.3 0.0 1.3 1 1 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 gi|433638995|ref|YP_007284755.1| - 3.9e-10 39.9 0.0 4.4e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 gi|433638995|ref|YP_007284755.1| - 0.0015 18.8 0.0 0.002 18.4 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|433638995|ref|YP_007284755.1| - 0.097 13.1 0.0 0.14 12.6 0.0 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF202 PF02656.15 gi|433638996|ref|YP_007284756.1| - 3.2 8.2 11.8 11 6.6 6.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF2304 PF10066.9 gi|433638996|ref|YP_007284756.1| - 3.4 8.0 7.7 5.2 7.3 7.7 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) HTH_20 PF12840.7 gi|433638997|ref|YP_007284757.1| - 5.1e-07 29.7 0.5 7.2e-07 29.2 0.5 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|433638997|ref|YP_007284757.1| - 5.2e-06 26.3 0.0 7.1e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433638997|ref|YP_007284757.1| - 5.6e-06 26.1 0.0 1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|433638997|ref|YP_007284757.1| - 9.6e-06 25.3 0.3 1.5e-05 24.7 0.3 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_7 PF02796.15 gi|433638997|ref|YP_007284757.1| - 0.0014 18.6 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase RP-C PF03428.13 gi|433638997|ref|YP_007284757.1| - 0.0014 18.3 0.0 0.0018 18.0 0.0 1.1 1 0 0 1 1 1 1 Replication protein C N-terminal domain HTH_5 PF01022.20 gi|433638997|ref|YP_007284757.1| - 0.0026 17.6 0.1 0.0038 17.1 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_8 PF02954.19 gi|433638997|ref|YP_007284757.1| - 0.0076 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_11 PF08279.12 gi|433638997|ref|YP_007284757.1| - 0.0095 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|433638997|ref|YP_007284757.1| - 0.031 13.8 0.0 0.06 12.9 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|433638997|ref|YP_007284757.1| - 0.035 14.1 0.1 0.052 13.5 0.1 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Mga PF05043.13 gi|433638997|ref|YP_007284757.1| - 0.042 14.4 0.0 0.072 13.7 0.0 1.3 1 0 0 1 1 1 0 Mga helix-turn-helix domain PadR PF03551.14 gi|433638997|ref|YP_007284757.1| - 0.071 13.1 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family FUR PF01475.19 gi|433638997|ref|YP_007284757.1| - 0.071 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_28 PF13518.6 gi|433638997|ref|YP_007284757.1| - 0.098 12.8 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4632 PF15451.6 gi|433638997|ref|YP_007284757.1| - 0.32 11.1 2.2 0.72 10.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) HTH_3 PF01381.22 gi|433638998|ref|YP_007284758.1| - 1.5e-08 34.5 0.0 2.4e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|433638998|ref|YP_007284758.1| - 9.8e-06 25.8 0.1 3.4e-05 24.1 0.1 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|433638998|ref|YP_007284758.1| - 0.00047 20.1 0.0 0.00097 19.0 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_19 PF12844.7 gi|433638998|ref|YP_007284758.1| - 0.0016 18.4 0.0 0.0028 17.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|433638998|ref|YP_007284758.1| - 0.0062 16.3 0.0 0.018 14.8 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain YdaS_antitoxin PF15943.5 gi|433638998|ref|YP_007284758.1| - 0.0097 15.8 0.0 0.031 14.2 0.0 1.8 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_25 PF13413.6 gi|433638998|ref|YP_007284758.1| - 0.022 14.6 0.1 0.055 13.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AraC PF00165.23 gi|433638998|ref|YP_007284758.1| - 0.1 12.8 0.1 0.35 11.0 0.0 1.9 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix proteins, AraC family Sigma70_r4 PF04545.16 gi|433638998|ref|YP_007284758.1| - 0.12 11.9 0.0 0.28 10.8 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_8 PF02954.19 gi|433638998|ref|YP_007284758.1| - 0.13 12.0 0.1 0.32 10.8 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family DUF1743 PF08489.11 gi|433638999|ref|YP_007284759.1| - 3e-34 117.5 0.0 5.5e-34 116.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) OrfB_Zn_ribbon PF07282.11 gi|433638999|ref|YP_007284759.1| - 0.026 14.5 2.2 0.065 13.2 2.2 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|433638999|ref|YP_007284759.1| - 0.033 14.3 0.7 3.3 7.9 0.0 2.5 2 0 0 2 2 2 0 Zinc ribbon domain C1_1 PF00130.22 gi|433638999|ref|YP_007284759.1| - 0.12 12.3 0.2 0.25 11.3 0.2 1.5 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-Mss51 PF13824.6 gi|433638999|ref|YP_007284759.1| - 0.18 11.9 0.8 0.42 10.7 0.8 1.6 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_Tnp_IS1 PF03811.13 gi|433638999|ref|YP_007284759.1| - 3.3 7.5 6.6 14 5.6 6.6 2.1 1 1 0 1 1 1 0 InsA N-terminal domain Phage_int_SAM_1 PF02899.17 gi|433639002|ref|YP_007284762.1| - 1.9e-12 47.3 0.2 4.7e-12 46.0 0.2 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_integrase PF00589.22 gi|433639002|ref|YP_007284762.1| - 1.3e-08 34.8 0.1 1.5e-07 31.4 0.1 2.4 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|433639002|ref|YP_007284762.1| - 2.6e-07 31.0 0.0 1.1e-05 25.7 0.0 2.0 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|433639002|ref|YP_007284762.1| - 0.14 12.5 0.0 0.34 11.3 0.0 1.6 2 0 0 2 2 2 0 Phage integrase SAM-like domain PaaX PF07848.12 gi|433639004|ref|YP_007284764.1| - 0.00071 19.7 0.0 0.00094 19.4 0.0 1.2 1 0 0 1 1 1 1 PaaX-like protein HTH_27 PF13463.6 gi|433639004|ref|YP_007284764.1| - 0.01 16.3 0.0 0.02 15.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain RQC PF09382.10 gi|433639004|ref|YP_007284764.1| - 0.015 15.1 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 RQC domain PadR PF03551.14 gi|433639004|ref|YP_007284764.1| - 0.02 14.8 0.1 0.029 14.3 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Mrr_N PF14338.6 gi|433639004|ref|YP_007284764.1| - 0.025 14.7 0.1 0.047 13.8 0.1 1.5 2 0 0 2 2 2 0 Mrr N-terminal domain HTH_34 PF13601.6 gi|433639004|ref|YP_007284764.1| - 0.025 14.7 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|433639004|ref|YP_007284764.1| - 0.032 14.0 0.0 0.046 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) HTH_24 PF13412.6 gi|433639004|ref|YP_007284764.1| - 0.035 13.7 0.0 0.15 11.6 0.0 2.0 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Replic_Relax PF13814.6 gi|433639004|ref|YP_007284764.1| - 0.065 13.3 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_45 PF14947.6 gi|433639004|ref|YP_007284764.1| - 0.087 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix YjhX_toxin PF09857.9 gi|433639004|ref|YP_007284764.1| - 0.097 12.6 0.0 0.15 12.1 0.0 1.4 1 1 0 1 1 1 0 Putative toxin of bacterial toxin-antitoxin pair Pilin_N PF07790.11 gi|433639006|ref|YP_007284766.1| - 3.4e-15 56.7 6.1 4.1e-15 56.5 5.2 1.6 1 1 0 1 1 1 1 Archaeal Type IV pilin, N-terminal DUF4307 PF14155.6 gi|433639006|ref|YP_007284766.1| - 0.029 14.2 0.6 0.062 13.1 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF1282 PF06930.12 gi|433639006|ref|YP_007284766.1| - 0.047 13.5 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) DUF3995 PF13160.6 gi|433639006|ref|YP_007284766.1| - 0.052 13.9 0.0 0.16 12.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) Tad PF13400.6 gi|433639006|ref|YP_007284766.1| - 0.061 13.6 1.1 0.094 13.0 1.1 1.3 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Phyto-Amp PF15438.6 gi|433639008|ref|YP_007284768.1| - 0.016 15.0 0.6 0.026 14.4 0.6 1.3 1 0 0 1 1 1 0 Antigenic membrane protein of phytoplasma Spore_YpjB PF09577.10 gi|433639008|ref|YP_007284768.1| - 0.061 13.1 0.1 0.081 12.7 0.1 1.1 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) MucBP_2 PF17965.1 gi|433639008|ref|YP_007284768.1| - 0.55 10.8 5.5 0.19 12.3 1.7 2.1 1 1 1 2 2 2 0 Mucin binding domain PQQ_2 PF13360.6 gi|433639009|ref|YP_007284769.1| - 4.3e-25 88.7 14.8 2.2e-21 76.5 7.3 2.9 1 1 1 2 2 2 2 PQQ-like domain TAT_signal PF10518.9 gi|433639009|ref|YP_007284769.1| - 1.1e-06 28.2 0.6 2.1e-06 27.3 0.6 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence PQQ PF01011.21 gi|433639009|ref|YP_007284769.1| - 4.6e-06 26.3 8.3 1.6 8.8 0.0 5.8 6 0 0 6 6 6 3 PQQ enzyme repeat PQQ_3 PF13570.6 gi|433639009|ref|YP_007284769.1| - 0.00015 22.2 9.5 0.19 12.3 0.2 5.6 5 0 0 5 5 5 2 PQQ-like domain DUF4404 PF14357.6 gi|433639011|ref|YP_007284771.1| - 0.11 13.2 0.1 0.17 12.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) HTH_23 PF13384.6 gi|433639012|ref|YP_007284772.1| - 0.0049 16.6 0.1 0.021 14.6 0.1 2.1 1 0 0 1 1 1 1 Homeodomain-like domain AAA_30 PF13604.6 gi|433639012|ref|YP_007284772.1| - 0.02 14.6 0.0 0.12 12.1 0.0 2.2 1 1 1 2 2 2 0 AAA domain QueH PF02677.14 gi|433639016|ref|YP_007284776.1| - 0.026 14.7 0.4 0.031 14.4 0.4 1.1 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH DUF2540 PF10802.8 gi|433639016|ref|YP_007284776.1| - 0.085 12.9 0.1 0.28 11.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) Vpu PF00558.19 gi|433639016|ref|YP_007284776.1| - 0.098 12.4 0.6 0.18 11.6 0.6 1.5 1 0 0 1 1 1 0 Vpu protein HHH_5 PF14520.6 gi|433639017|ref|YP_007284777.1| - 0.15 12.6 0.1 0.36 11.4 0.1 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain HTH_15 PF12324.8 gi|433639019|ref|YP_007284779.1| - 0.0091 15.9 0.0 0.024 14.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of alkylmercury lyase MarR_2 PF12802.7 gi|433639019|ref|YP_007284779.1| - 0.037 13.9 0.0 0.17 11.8 0.0 2.2 2 0 0 2 2 2 0 MarR family MethyltransfD12 PF02086.15 gi|433639020|ref|YP_007284780.1| - 5.2e-20 72.2 0.0 7.4e-20 71.7 0.0 1.2 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase REV PF00424.18 gi|433639020|ref|YP_007284780.1| - 0.15 12.1 0.5 0.29 11.2 0.5 1.4 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) MazG PF03819.17 gi|433639021|ref|YP_007284781.1| - 0.0065 16.6 0.3 0.0097 16.1 0.3 1.3 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 gi|433639021|ref|YP_007284781.1| - 0.1 12.9 0.1 0.22 11.8 0.0 1.5 1 1 0 1 1 1 0 MazG-like family ACP_syn_III_C PF08541.10 gi|433639023|ref|YP_007284783.1| - 7.2e-21 74.2 0.1 1.8e-16 60.0 0.0 3.1 2 1 1 3 3 3 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|433639023|ref|YP_007284783.1| - 5.1e-11 42.3 0.0 9.3e-11 41.4 0.0 1.4 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FAE1_CUT1_RppA PF08392.12 gi|433639023|ref|YP_007284783.1| - 0.0051 16.1 0.0 0.0075 15.6 0.0 1.1 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein Nas2_N PF18265.1 gi|433639023|ref|YP_007284783.1| - 0.11 12.5 0.1 0.27 11.2 0.0 1.7 2 0 0 2 2 2 0 Nas2 N_terminal domain BPD_transp_2 PF02653.16 gi|433639024|ref|YP_007284784.1| - 2.5e-36 125.2 28.9 2.5e-36 125.2 28.9 1.5 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|433639025|ref|YP_007284785.1| - 1.9e-39 135.5 40.8 1.9e-39 135.5 40.8 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 gi|433639026|ref|YP_007284786.1| - 5e-29 101.6 0.0 6.8e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639026|ref|YP_007284786.1| - 6.1e-08 32.8 0.2 0.0051 16.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|433639026|ref|YP_007284786.1| - 0.0026 18.0 0.0 0.0064 16.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433639026|ref|YP_007284786.1| - 0.0029 17.3 0.9 0.0081 15.9 0.9 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433639026|ref|YP_007284786.1| - 0.0034 16.8 0.0 1.1 8.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|433639026|ref|YP_007284786.1| - 0.004 17.6 0.3 0.0072 16.7 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|433639026|ref|YP_007284786.1| - 0.014 15.1 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|433639026|ref|YP_007284786.1| - 0.053 13.4 0.0 0.13 12.2 0.0 1.6 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.22 gi|433639026|ref|YP_007284786.1| - 0.086 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 gi|433639026|ref|YP_007284786.1| - 0.1 13.1 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|433639026|ref|YP_007284786.1| - 0.11 11.6 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_15 PF13175.6 gi|433639026|ref|YP_007284786.1| - 0.14 11.8 0.0 0.47 10.1 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433639026|ref|YP_007284786.1| - 0.18 11.7 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase DUF3584 PF12128.8 gi|433639026|ref|YP_007284786.1| - 0.2 9.1 0.2 0.3 8.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran PF00005.27 gi|433639027|ref|YP_007284787.1| - 4.3e-25 88.8 0.0 6.1e-25 88.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639027|ref|YP_007284787.1| - 4.8e-07 29.9 0.0 0.0078 16.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|433639027|ref|YP_007284787.1| - 5.8e-05 23.7 0.0 6.8e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain BCA_ABC_TP_C PF12399.8 gi|433639027|ref|YP_007284787.1| - 8.2e-05 22.4 0.1 8.2e-05 22.4 0.1 1.8 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.19 gi|433639027|ref|YP_007284787.1| - 0.0068 15.9 0.1 0.038 13.4 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433639027|ref|YP_007284787.1| - 0.0082 15.9 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|433639027|ref|YP_007284787.1| - 0.014 15.1 0.1 0.082 12.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|433639027|ref|YP_007284787.1| - 0.014 15.4 0.8 0.073 13.2 0.8 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_27 PF13514.6 gi|433639027|ref|YP_007284787.1| - 0.031 13.9 0.1 0.046 13.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433639027|ref|YP_007284787.1| - 0.054 13.4 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 gi|433639027|ref|YP_007284787.1| - 0.11 12.8 0.0 0.25 11.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain Peripla_BP_6 PF13458.6 gi|433639028|ref|YP_007284788.1| - 1.3e-52 179.6 9.9 2.1e-52 178.9 9.9 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 gi|433639028|ref|YP_007284788.1| - 2.7e-07 29.9 0.1 0.012 14.6 0.0 2.3 2 1 0 2 2 2 2 Periplasmic binding protein domain ANF_receptor PF01094.28 gi|433639028|ref|YP_007284788.1| - 9.4e-06 25.0 0.0 1.1e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Receptor family ligand binding region HTH_10 PF04967.12 gi|433639029|ref|YP_007284789.1| - 3.6e-16 58.7 0.1 6.1e-16 58.0 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.7 gi|433639029|ref|YP_007284789.1| - 0.069 13.1 0.0 0.27 11.2 0.0 2.0 2 0 0 2 2 2 0 MarR family HTH_11 PF08279.12 gi|433639029|ref|YP_007284789.1| - 0.081 12.9 0.0 0.22 11.5 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_Tnp_4 PF13613.6 gi|433639029|ref|YP_007284789.1| - 0.19 11.5 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease AMP-binding PF00501.28 gi|433639030|ref|YP_007284790.1| - 1.6e-88 297.2 0.0 1.9e-88 296.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433639030|ref|YP_007284790.1| - 9.1e-15 55.4 0.7 1.9e-14 54.4 0.7 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Abhydrolase_1 PF00561.20 gi|433639031|ref|YP_007284791.1| - 6.6e-22 78.4 0.1 4.4e-20 72.4 0.1 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|433639031|ref|YP_007284791.1| - 1e-19 72.0 5.5 1.2e-19 71.8 5.5 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|433639031|ref|YP_007284791.1| - 1e-12 47.9 0.1 3.2e-12 46.2 0.1 1.7 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|433639031|ref|YP_007284791.1| - 0.00091 18.8 0.1 0.11 12.0 0.0 2.2 2 0 0 2 2 2 1 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 gi|433639031|ref|YP_007284791.1| - 0.0016 18.3 0.0 0.24 11.1 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 gi|433639031|ref|YP_007284791.1| - 0.0048 17.0 0.0 0.0082 16.2 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein Esterase PF00756.20 gi|433639031|ref|YP_007284791.1| - 0.032 13.9 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Peptidase_S9 PF00326.21 gi|433639031|ref|YP_007284791.1| - 0.07 12.6 0.1 2.9 7.3 0.0 2.2 2 0 0 2 2 2 0 Prolyl oligopeptidase family TetR_C_16 PF17920.1 gi|433639031|ref|YP_007284791.1| - 0.093 13.0 1.3 0.44 10.8 0.1 2.6 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF915 PF06028.11 gi|433639031|ref|YP_007284791.1| - 0.15 11.4 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) MaoC_dehydratas PF01575.19 gi|433639032|ref|YP_007284792.1| - 7.5e-26 90.1 0.0 9.2e-26 89.8 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|433639032|ref|YP_007284792.1| - 2.1e-08 34.4 0.0 4.4e-08 33.3 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.22 gi|433639032|ref|YP_007284792.1| - 0.025 14.9 0.1 0.052 13.9 0.1 1.5 1 1 0 1 1 1 0 Thioesterase superfamily TruB_N PF01509.18 gi|433639033|ref|YP_007284793.1| - 3.1e-22 79.5 0.5 1.5e-12 48.1 0.0 3.1 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|433639033|ref|YP_007284793.1| - 1.1e-20 73.6 0.3 2.5e-20 72.4 0.1 1.8 2 0 0 2 2 2 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|433639033|ref|YP_007284793.1| - 8.1e-10 38.6 0.2 1.9e-09 37.5 0.2 1.6 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|433639033|ref|YP_007284793.1| - 0.00048 20.0 0.1 0.0018 18.2 0.1 2.0 1 1 0 1 1 1 1 PUA domain Cytidylate_kin2 PF13189.6 gi|433639034|ref|YP_007284794.1| - 9.6e-20 71.4 0.2 1.3e-13 51.5 0.4 2.0 1 1 1 2 2 2 2 Cytidylate kinase-like family AAA_18 PF13238.6 gi|433639034|ref|YP_007284794.1| - 8.1e-15 55.5 0.0 1e-14 55.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|433639034|ref|YP_007284794.1| - 1.5e-13 51.3 0.0 3.4e-13 50.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|433639034|ref|YP_007284794.1| - 3.4e-10 40.0 0.1 0.00013 21.7 0.0 2.1 1 1 0 2 2 2 2 Cytidylate kinase ADK PF00406.22 gi|433639034|ref|YP_007284794.1| - 1.2e-07 32.0 0.0 2.3e-07 31.0 0.0 1.5 1 1 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 gi|433639034|ref|YP_007284794.1| - 5.6e-07 29.8 0.2 8.4e-06 26.0 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|433639034|ref|YP_007284794.1| - 0.00017 21.9 0.5 0.00072 19.8 0.4 2.1 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|433639034|ref|YP_007284794.1| - 0.0021 18.2 0.3 0.013 15.6 0.3 2.0 1 1 0 1 1 1 1 Shikimate kinase AAA_22 PF13401.6 gi|433639034|ref|YP_007284794.1| - 0.0035 17.6 0.0 0.0051 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433639034|ref|YP_007284794.1| - 0.0037 17.7 0.0 0.0058 17.1 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|433639034|ref|YP_007284794.1| - 0.0054 17.1 0.6 0.0087 16.5 0.6 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|433639034|ref|YP_007284794.1| - 0.02 14.6 0.1 0.36 10.5 0.1 2.2 1 1 1 2 2 2 0 AAA domain KTI12 PF08433.10 gi|433639034|ref|YP_007284794.1| - 0.021 14.2 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 gi|433639034|ref|YP_007284794.1| - 0.028 14.1 0.1 2.1 8.0 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase dNK PF01712.19 gi|433639034|ref|YP_007284794.1| - 0.05 13.5 0.0 0.16 11.8 0.0 1.8 2 1 0 2 2 2 0 Deoxynucleoside kinase Zeta_toxin PF06414.12 gi|433639034|ref|YP_007284794.1| - 0.07 12.4 0.3 0.2 10.9 0.0 1.8 2 1 0 2 2 2 0 Zeta toxin ATP_bind_1 PF03029.17 gi|433639034|ref|YP_007284794.1| - 0.074 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|433639034|ref|YP_007284794.1| - 0.081 13.4 0.0 0.084 13.4 0.0 1.3 1 1 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 gi|433639034|ref|YP_007284794.1| - 0.12 12.8 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Hydin_ADK PF17213.3 gi|433639034|ref|YP_007284794.1| - 0.13 12.5 0.1 0.25 11.6 0.0 1.5 2 0 0 2 2 1 0 Hydin Adenylate kinase-like domain Ploopntkinase3 PF18751.1 gi|433639034|ref|YP_007284794.1| - 0.15 11.9 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Rad17 PF03215.15 gi|433639034|ref|YP_007284794.1| - 0.21 11.5 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain EMC3_TMCO1 PF01956.16 gi|433639035|ref|YP_007284795.1| - 1.4e-37 129.1 0.7 2e-37 128.6 0.7 1.2 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like Med4 PF10018.9 gi|433639035|ref|YP_007284795.1| - 0.028 14.1 4.6 0.12 12.1 2.0 2.1 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 60KD_IMP PF02096.20 gi|433639035|ref|YP_007284795.1| - 0.036 14.0 2.6 1.8 8.4 2.6 2.2 1 1 0 1 1 1 0 60Kd inner membrane protein DUF4199 PF13858.6 gi|433639035|ref|YP_007284795.1| - 0.045 14.1 4.4 0.22 11.9 4.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Laminin_I PF06008.14 gi|433639035|ref|YP_007284795.1| - 0.051 13.3 4.1 0.095 12.4 4.1 1.3 1 0 0 1 1 1 0 Laminin Domain I Folate_carrier PF01770.18 gi|433639035|ref|YP_007284795.1| - 0.053 12.3 0.1 0.053 12.3 0.1 1.8 2 0 0 2 2 2 0 Reduced folate carrier HAUS5 PF14817.6 gi|433639035|ref|YP_007284795.1| - 0.058 12.2 3.4 0.086 11.6 3.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 DUF4407 PF14362.6 gi|433639035|ref|YP_007284795.1| - 0.061 12.7 0.1 0.1 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CSG2 PF16965.5 gi|433639035|ref|YP_007284795.1| - 0.11 11.4 0.1 0.16 10.9 0.1 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator DUF2681 PF10883.8 gi|433639035|ref|YP_007284795.1| - 0.49 10.8 5.3 0.16 12.4 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) DUF612 PF04747.12 gi|433639035|ref|YP_007284795.1| - 0.5 9.4 7.9 0.66 9.0 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF612 DUF4200 PF13863.6 gi|433639035|ref|YP_007284795.1| - 0.61 10.5 11.1 0.062 13.7 6.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Nop53 PF07767.11 gi|433639035|ref|YP_007284795.1| - 0.87 8.9 8.9 0.084 12.2 4.6 1.4 2 0 0 2 2 2 0 Nop53 (60S ribosomal biogenesis) DUF4175 PF13779.6 gi|433639035|ref|YP_007284795.1| - 0.94 7.3 8.4 1.4 6.8 8.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) APG6_N PF17675.1 gi|433639035|ref|YP_007284795.1| - 1.5 9.3 10.4 0.36 11.4 5.2 2.0 2 0 0 2 2 2 0 Apg6 coiled-coil region MCH PF02289.16 gi|433639036|ref|YP_007284796.1| - 2.5e-108 362.1 0.1 2.8e-108 361.9 0.1 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) DUF4774 PF15999.5 gi|433639036|ref|YP_007284796.1| - 0.042 13.7 0.5 0.092 12.6 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) GTP_EFTU PF00009.27 gi|433639038|ref|YP_007284798.1| - 3e-33 115.0 0.0 4.7e-33 114.4 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|433639038|ref|YP_007284798.1| - 1.2e-09 38.5 0.6 4.6e-09 36.5 0.5 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 gi|433639038|ref|YP_007284798.1| - 1.3e-06 28.7 0.0 6.4e-06 26.4 0.0 2.1 1 1 0 1 1 1 1 Elongation factor Tu C-terminal domain Polysacc_deac_1 PF01522.21 gi|433639038|ref|YP_007284798.1| - 0.013 15.4 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Polysaccharide deacetylase RsgA_GTPase PF03193.16 gi|433639038|ref|YP_007284798.1| - 0.025 14.5 0.1 0.6 10.0 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|433639038|ref|YP_007284798.1| - 0.1 12.7 0.0 0.3 11.2 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase BAAT_C PF08840.11 gi|433639039|ref|YP_007284799.1| - 1.1e-34 120.3 0.0 2e-34 119.4 0.0 1.4 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|433639039|ref|YP_007284799.1| - 7.3e-06 25.6 0.0 1.3e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|433639039|ref|YP_007284799.1| - 0.0001 22.0 0.4 0.035 13.7 0.4 3.0 1 1 0 1 1 1 1 Dienelactone hydrolase family Bile_Hydr_Trans PF04775.14 gi|433639039|ref|YP_007284799.1| - 0.00013 22.1 0.0 0.00022 21.3 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA thioester hydrolase/BAAT N-terminal region Abhydrolase_1 PF00561.20 gi|433639039|ref|YP_007284799.1| - 0.05 13.3 0.2 0.82 9.3 0.1 2.1 1 1 0 2 2 2 0 alpha/beta hydrolase fold AXE1 PF05448.12 gi|433639039|ref|YP_007284799.1| - 0.062 12.0 0.0 0.13 10.9 0.0 1.4 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Glyoxalase_2 PF12681.7 gi|433639041|ref|YP_007284801.1| - 5.2e-05 23.1 0.2 0.00012 22.0 0.2 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|433639041|ref|YP_007284801.1| - 0.0012 19.1 0.7 0.026 14.7 0.7 2.1 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433639041|ref|YP_007284801.1| - 0.0027 18.5 0.0 0.005 17.6 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain zf-B_box PF00643.24 gi|433639042|ref|YP_007284802.1| - 0.00013 22.1 6.1 0.00064 19.8 3.2 2.1 2 0 0 2 2 2 1 B-box zinc finger zf-HIT PF04438.16 gi|433639042|ref|YP_007284802.1| - 0.0012 18.6 1.8 0.0012 18.6 1.8 1.9 2 0 0 2 2 2 1 HIT zinc finger zf-C3HC4_3 PF13920.6 gi|433639042|ref|YP_007284802.1| - 0.016 15.0 6.3 0.26 11.2 4.3 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) RecR PF02132.15 gi|433639042|ref|YP_007284802.1| - 0.097 12.3 6.6 1.8 8.2 2.6 2.4 2 1 0 2 2 2 0 RecR protein Prok-RING_4 PF14447.6 gi|433639042|ref|YP_007284802.1| - 0.19 11.6 7.7 0.58 10.1 7.7 1.7 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 Prok-RING_2 PF14445.6 gi|433639042|ref|YP_007284802.1| - 0.22 11.7 4.6 0.3 11.3 4.6 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 DZR PF12773.7 gi|433639042|ref|YP_007284802.1| - 0.42 10.7 9.4 17 5.5 9.4 2.0 1 1 0 1 1 1 0 Double zinc ribbon FYVE PF01363.21 gi|433639042|ref|YP_007284802.1| - 0.92 9.7 8.9 3.6 7.8 8.9 1.9 1 1 0 1 1 1 0 FYVE zinc finger OMPdecase PF00215.24 gi|433639043|ref|YP_007284803.1| - 7.9e-31 107.4 0.0 9.8e-31 107.1 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ASRT PF07100.11 gi|433639044|ref|YP_007284804.1| - 5.1e-56 187.9 0.0 5.6e-56 187.7 0.0 1.0 1 0 0 1 1 1 1 Anabaena sensory rhodopsin transducer Peptidase_M48 PF01435.18 gi|433639045|ref|YP_007284805.1| - 5.5e-27 94.8 0.0 1.4e-26 93.5 0.0 1.6 1 1 0 1 1 1 1 Peptidase family M48 SprT-like PF10263.9 gi|433639045|ref|YP_007284805.1| - 0.009 15.9 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 SprT-like family Peptidase_M56 PF05569.11 gi|433639045|ref|YP_007284805.1| - 0.024 13.9 0.0 0.047 12.9 0.0 1.4 1 0 0 1 1 1 0 BlaR1 peptidase M56 Phage_holin_3_6 PF07332.11 gi|433639045|ref|YP_007284805.1| - 7.8 6.6 13.4 47 4.1 13.4 2.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Usp PF00582.26 gi|433639046|ref|YP_007284806.1| - 6.8e-32 110.9 0.1 7.7e-32 110.7 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Catalase PF00199.19 gi|433639049|ref|YP_007284809.1| - 5.3e-165 549.2 0.0 8.1e-165 548.6 0.0 1.3 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 gi|433639049|ref|YP_007284809.1| - 2.6e-23 82.0 0.3 6e-23 80.8 0.3 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive Catalase_C PF18011.1 gi|433639049|ref|YP_007284809.1| - 1.3e-21 76.8 0.2 2e-21 76.2 0.2 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases DJ-1_PfpI PF01965.24 gi|433639049|ref|YP_007284809.1| - 3.7e-12 46.4 0.2 6.2e-12 45.6 0.2 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family Ion_trans_2 PF07885.16 gi|433639050|ref|YP_007284810.1| - 1.9e-05 24.5 4.7 1.9e-05 24.5 4.7 2.0 2 1 0 2 2 2 1 Ion channel Cation_ATPase_C PF00689.21 gi|433639050|ref|YP_007284810.1| - 0.3 10.8 1.5 0.35 10.5 0.1 1.7 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus Na_H_Exchanger PF00999.21 gi|433639051|ref|YP_007284811.1| - 2e-38 132.2 33.0 2.5e-38 131.9 33.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TAT_signal PF10518.9 gi|433639052|ref|YP_007284812.1| - 0.03 14.2 2.8 0.03 14.2 2.8 2.6 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence TrkA_C PF02080.21 gi|433639053|ref|YP_007284813.1| - 2.5e-17 62.5 0.7 1.4e-16 60.1 0.1 2.1 2 1 0 2 2 2 1 TrkA-C domain ArsA_HSP20 PF17886.1 gi|433639053|ref|YP_007284813.1| - 0.059 12.9 0.0 1.8 8.2 0.0 2.3 2 0 0 2 2 2 0 HSP20-like domain found in ArsA Na_H_Exchanger PF00999.21 gi|433639054|ref|YP_007284814.1| - 9e-44 149.8 46.5 1.2e-43 149.4 46.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family AdoMet_MTase PF07757.13 gi|433639054|ref|YP_007284814.1| - 0.2 12.0 0.0 0.4 11.0 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase AA_permease_2 PF13520.6 gi|433639055|ref|YP_007284815.1| - 1.3e-42 146.1 39.3 1.7e-42 145.8 39.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|433639055|ref|YP_007284815.1| - 7e-39 133.7 37.4 9.9e-39 133.2 37.4 1.2 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|433639055|ref|YP_007284815.1| - 2.5e-19 70.2 6.8 2.8e-12 47.3 0.2 3.3 2 1 0 2 2 2 2 Universal stress protein family ATP-synt_ab_N PF02874.23 gi|433639055|ref|YP_007284815.1| - 0.081 13.5 0.1 0.24 11.9 0.1 1.8 1 0 0 1 1 1 0 ATP synthase alpha/beta family, beta-barrel domain Usp PF00582.26 gi|433639056|ref|YP_007284816.1| - 3.3e-11 43.9 0.8 3.9e-11 43.6 0.8 1.1 1 0 0 1 1 1 1 Universal stress protein family TrkH PF02386.16 gi|433639057|ref|YP_007284817.1| - 2.2e-58 197.9 14.1 6.4e-30 104.0 7.0 2.0 1 1 0 2 2 2 2 Cation transport protein Form-deh_trans PF09163.11 gi|433639057|ref|YP_007284817.1| - 0.044 13.6 0.0 0.044 13.6 0.0 4.3 4 0 0 4 4 4 0 Formate dehydrogenase N, transmembrane TrkA_N PF02254.18 gi|433639058|ref|YP_007284818.1| - 2e-53 179.6 9.7 1.4e-26 93.0 1.2 2.5 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|433639058|ref|YP_007284818.1| - 2.5e-31 107.3 11.5 4.1e-15 55.4 0.8 4.6 4 1 0 4 4 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|433639058|ref|YP_007284818.1| - 7.6e-12 45.6 4.3 9e-06 26.1 0.7 2.6 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|433639058|ref|YP_007284818.1| - 1.1e-09 38.5 1.1 0.001 19.1 0.2 2.7 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|433639058|ref|YP_007284818.1| - 1.3e-08 35.3 2.2 0.0047 17.5 0.2 3.6 3 1 1 4 4 3 2 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|433639058|ref|YP_007284818.1| - 1.4e-08 35.1 2.6 0.00076 19.7 0.5 2.9 2 1 0 2 2 2 2 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|433639058|ref|YP_007284818.1| - 1.4e-07 31.5 0.3 0.014 15.3 0.1 2.6 2 1 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|433639058|ref|YP_007284818.1| - 1.8e-07 30.7 2.7 1.2e-06 28.0 2.7 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|433639058|ref|YP_007284818.1| - 5.4e-06 26.1 0.1 0.00015 21.4 0.0 2.6 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA adh_short PF00106.25 gi|433639058|ref|YP_007284818.1| - 2.5e-05 23.8 0.5 0.0097 15.4 0.0 2.6 2 0 0 2 2 2 1 short chain dehydrogenase AlaDh_PNT_C PF01262.21 gi|433639058|ref|YP_007284818.1| - 3.5e-05 23.2 3.6 0.0018 17.6 0.0 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|433639058|ref|YP_007284818.1| - 0.00032 21.2 1.6 0.1 13.2 0.0 3.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|433639058|ref|YP_007284818.1| - 0.00038 20.6 0.1 0.41 10.8 0.0 2.5 2 0 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|433639058|ref|YP_007284818.1| - 0.00048 19.7 0.0 0.017 14.7 0.2 2.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_3 PF01494.19 gi|433639058|ref|YP_007284818.1| - 0.00052 19.4 0.0 0.14 11.4 0.0 2.4 2 0 0 2 2 2 1 FAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|433639058|ref|YP_007284818.1| - 0.00061 19.8 0.0 1.2 9.1 0.0 2.5 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_3 PF13738.6 gi|433639058|ref|YP_007284818.1| - 0.0007 18.9 0.1 0.018 14.3 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Castor_Poll_mid PF06241.12 gi|433639058|ref|YP_007284818.1| - 0.00071 19.5 0.0 0.29 11.1 0.0 2.8 2 0 0 2 2 2 1 Castor and Pollux, part of voltage-gated ion channel adh_short_C2 PF13561.6 gi|433639058|ref|YP_007284818.1| - 0.0024 17.5 6.1 0.011 15.3 0.1 2.7 3 0 0 3 3 3 1 Enoyl-(Acyl carrier protein) reductase DAO PF01266.24 gi|433639058|ref|YP_007284818.1| - 0.0039 16.8 0.4 0.25 10.9 0.1 2.8 3 1 0 3 3 3 1 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 gi|433639058|ref|YP_007284818.1| - 0.0055 16.1 0.1 1.7 8.0 0.0 2.7 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|433639058|ref|YP_007284818.1| - 0.007 15.9 1.5 0.39 10.1 0.1 2.4 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_8 PF13450.6 gi|433639058|ref|YP_007284818.1| - 0.0073 16.5 1.0 0.32 11.2 0.1 2.9 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain ADH_zinc_N PF00107.26 gi|433639058|ref|YP_007284818.1| - 0.0087 16.0 2.3 0.053 13.5 0.2 3.1 3 1 1 4 4 4 1 Zinc-binding dehydrogenase XdhC_C PF13478.6 gi|433639058|ref|YP_007284818.1| - 0.013 16.0 5.7 2 9.0 0.6 3.1 2 1 1 3 3 3 0 XdhC Rossmann domain AA_kinase PF00696.28 gi|433639058|ref|YP_007284818.1| - 0.016 14.8 0.5 0.034 13.7 0.1 1.7 2 0 0 2 2 2 0 Amino acid kinase family DUF364 PF04016.12 gi|433639058|ref|YP_007284818.1| - 0.029 13.9 0.2 0.16 11.6 0.0 2.3 3 0 0 3 3 2 0 Putative heavy-metal chelation Rossmann-like PF10727.9 gi|433639058|ref|YP_007284818.1| - 0.035 14.0 3.2 0.55 10.1 0.1 2.8 2 1 0 2 2 2 0 Rossmann-like domain AdoHcyase_NAD PF00670.21 gi|433639058|ref|YP_007284818.1| - 0.045 13.8 0.5 17 5.4 0.0 2.7 2 1 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YflT PF11181.8 gi|433639058|ref|YP_007284818.1| - 0.096 13.2 3.2 0.14 12.7 0.0 2.8 3 1 1 4 4 1 0 Heat induced stress protein YflT IlvN PF07991.12 gi|433639058|ref|YP_007284818.1| - 0.11 12.0 0.9 0.63 9.6 0.3 2.3 2 1 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain HI0933_like PF03486.14 gi|433639058|ref|YP_007284818.1| - 0.13 10.9 0.0 9.5 4.8 0.0 2.3 2 0 0 2 2 2 0 HI0933-like protein ThiF PF00899.21 gi|433639058|ref|YP_007284818.1| - 4.3 6.6 8.3 3.9 6.8 0.5 3.5 2 2 2 4 4 4 0 ThiF family TrkH PF02386.16 gi|433639059|ref|YP_007284819.1| - 1.2e-66 225.2 12.5 3e-66 223.9 12.5 1.5 1 1 0 1 1 1 1 Cation transport protein HAD_2 PF13419.6 gi|433639060|ref|YP_007284820.1| - 8.7e-26 91.1 0.0 1e-25 90.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433639060|ref|YP_007284820.1| - 3e-11 44.0 0.4 3.6e-10 40.5 0.4 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433639060|ref|YP_007284820.1| - 2e-10 40.6 0.2 5.1e-10 39.3 0.2 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|433639060|ref|YP_007284820.1| - 1.4e-07 32.1 0.2 1.8e-07 31.8 0.2 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.18 gi|433639060|ref|YP_007284820.1| - 0.055 13.2 0.0 0.73 9.6 0.0 2.0 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase PGP_phosphatase PF09419.10 gi|433639060|ref|YP_007284820.1| - 0.12 11.9 0.2 2.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Mitochondrial PGP phosphatase DUF2240 PF09999.9 gi|433639062|ref|YP_007284822.1| - 2e-48 163.7 0.2 2.3e-48 163.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Ribosomal_S8e PF01201.22 gi|433639063|ref|YP_007284823.1| - 8.9e-30 103.6 2.1 1e-29 103.4 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e PhoU PF01895.19 gi|433639064|ref|YP_007284824.1| - 1.7e-20 73.3 10.9 8.3e-17 61.4 2.0 2.4 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|433639064|ref|YP_007284824.1| - 7.7e-12 44.8 0.0 2e-11 43.5 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin DUF948 PF06103.11 gi|433639064|ref|YP_007284824.1| - 0.12 12.7 3.3 3.3 8.0 0.0 3.1 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) KfrA_N PF11740.8 gi|433639064|ref|YP_007284824.1| - 0.65 10.7 3.8 0.57 10.9 1.6 2.0 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term PBP_like PF12727.7 gi|433639065|ref|YP_007284825.1| - 5.2e-23 81.2 0.0 1.2e-22 80.0 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 gi|433639065|ref|YP_007284825.1| - 5.2e-22 78.8 1.9 1.5e-21 77.3 1.9 1.6 1 1 0 1 1 1 1 PBP superfamily domain LysR_substrate PF03466.20 gi|433639065|ref|YP_007284825.1| - 0.085 12.2 0.0 2.4 7.5 0.0 2.1 2 0 0 2 2 2 0 LysR substrate binding domain BPD_transp_1 PF00528.22 gi|433639066|ref|YP_007284826.1| - 1.5e-16 60.6 16.9 1.5e-16 60.6 16.9 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|433639067|ref|YP_007284827.1| - 2e-21 76.6 21.9 2e-21 76.6 21.9 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|433639068|ref|YP_007284828.1| - 1.9e-29 102.9 0.0 3.4e-29 102.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639068|ref|YP_007284828.1| - 1.6e-11 44.6 0.0 1.6e-05 24.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433639068|ref|YP_007284828.1| - 3.9e-10 39.6 0.2 4.7e-09 36.0 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|433639068|ref|YP_007284828.1| - 3.1e-06 27.1 0.0 0.00047 20.0 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|433639068|ref|YP_007284828.1| - 8.1e-06 26.1 0.0 2.2e-05 24.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|433639068|ref|YP_007284828.1| - 0.00032 20.7 0.0 0.00068 19.6 0.0 1.5 2 0 0 2 2 1 1 RsgA GTPase AAA_29 PF13555.6 gi|433639068|ref|YP_007284828.1| - 0.00055 19.6 0.0 0.0013 18.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433639068|ref|YP_007284828.1| - 0.0013 19.2 0.0 0.0042 17.6 0.0 1.7 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|433639068|ref|YP_007284828.1| - 0.0017 18.1 0.1 0.22 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|433639068|ref|YP_007284828.1| - 0.0038 17.6 0.2 0.018 15.5 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|433639068|ref|YP_007284828.1| - 0.006 16.7 0.0 0.014 15.5 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.6 gi|433639068|ref|YP_007284828.1| - 0.0067 17.0 0.0 0.026 15.0 0.0 1.9 2 1 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|433639068|ref|YP_007284828.1| - 0.0079 16.1 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain DeoRC PF00455.22 gi|433639068|ref|YP_007284828.1| - 0.0084 16.1 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 DeoR C terminal sensor domain PRK PF00485.18 gi|433639068|ref|YP_007284828.1| - 0.01 15.6 0.0 0.032 14.0 0.0 1.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.6 gi|433639068|ref|YP_007284828.1| - 0.014 15.0 0.0 0.11 12.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|433639068|ref|YP_007284828.1| - 0.047 13.6 0.0 0.096 12.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 gi|433639068|ref|YP_007284828.1| - 0.047 13.4 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|433639068|ref|YP_007284828.1| - 0.05 13.5 0.0 0.48 10.3 0.0 2.1 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|433639068|ref|YP_007284828.1| - 0.056 12.6 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain KdpD PF02702.17 gi|433639068|ref|YP_007284828.1| - 0.063 12.7 0.1 0.1 12.1 0.1 1.3 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain RNA_helicase PF00910.22 gi|433639068|ref|YP_007284828.1| - 0.14 12.5 0.0 0.41 11.1 0.0 1.8 1 0 0 1 1 1 0 RNA helicase AAA PF00004.29 gi|433639068|ref|YP_007284828.1| - 0.15 12.5 0.0 2 8.8 0.0 2.3 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|433639068|ref|YP_007284828.1| - 0.18 11.0 0.0 0.64 9.1 0.0 1.9 1 1 0 1 1 1 0 G-protein alpha subunit Adeno_IVa2 PF02456.15 gi|433639068|ref|YP_007284828.1| - 0.19 10.5 0.0 2.2 7.0 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein ADH_N PF08240.12 gi|433639069|ref|YP_007284829.1| - 1.1e-28 99.3 1.8 1.3e-28 99.0 1.0 1.6 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|433639069|ref|YP_007284829.1| - 9.5e-10 38.6 0.3 1.7e-08 34.5 0.3 2.2 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N_assoc PF13823.6 gi|433639069|ref|YP_007284829.1| - 0.00094 19.1 0.0 0.0025 17.7 0.0 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-associated Glu_dehyd_C PF16912.5 gi|433639069|ref|YP_007284829.1| - 0.0024 17.4 0.8 0.0084 15.6 0.0 2.2 3 0 0 3 3 3 1 Glucose dehydrogenase C-terminus HI0933_like PF03486.14 gi|433639069|ref|YP_007284829.1| - 0.012 14.3 0.0 0.016 13.9 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|433639069|ref|YP_007284829.1| - 0.015 14.6 0.1 0.025 13.9 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 gi|433639069|ref|YP_007284829.1| - 0.016 14.4 0.0 0.023 13.9 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|433639069|ref|YP_007284829.1| - 0.042 13.1 0.0 0.063 12.5 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 gi|433639069|ref|YP_007284829.1| - 0.045 14.3 0.1 0.099 13.2 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|433639069|ref|YP_007284829.1| - 0.18 11.6 0.1 0.29 11.0 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhoU PF01895.19 gi|433639070|ref|YP_007284830.1| - 1.3e-38 131.3 14.8 2.8e-21 75.8 1.3 2.1 2 0 0 2 2 2 2 PhoU domain 5_nucleotid_C PF02872.18 gi|433639071|ref|YP_007284831.1| - 1.3e-17 64.5 0.0 2.1e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 gi|433639071|ref|YP_007284831.1| - 5.9e-05 23.6 0.2 0.00014 22.5 0.2 1.7 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_transf_4 PF13439.6 gi|433639071|ref|YP_007284831.1| - 0.11 12.5 0.1 0.38 10.7 0.0 2.0 2 0 0 2 2 2 0 Glycosyltransferase Family 4 PLAC9 PF15205.6 gi|433639072|ref|YP_007284832.1| - 0.025 15.0 0.3 0.064 13.7 0.3 1.6 1 0 0 1 1 1 0 Placenta-specific protein 9 bPH_1 PF08000.11 gi|433639072|ref|YP_007284832.1| - 0.049 13.7 0.3 0.16 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial PH domain bPH_3 PF14470.6 gi|433639072|ref|YP_007284832.1| - 0.13 12.7 0.0 0.35 11.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial PH domain Prefoldin_2 PF01920.20 gi|433639072|ref|YP_007284832.1| - 0.16 11.9 3.2 0.36 10.8 1.0 2.2 2 0 0 2 2 2 0 Prefoldin subunit SlyX PF04102.12 gi|433639072|ref|YP_007284832.1| - 4.9 7.8 8.9 1.8 9.2 3.0 2.5 2 0 0 2 2 2 0 SlyX TF_Zn_Ribbon PF08271.12 gi|433639073|ref|YP_007284833.1| - 0.071 12.6 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding DUF2688 PF10892.8 gi|433639073|ref|YP_007284833.1| - 0.22 11.0 1.3 0.47 10.0 1.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2688) SNARE_assoc PF09335.11 gi|433639074|ref|YP_007284834.1| - 1.1e-11 45.2 1.9 1.1e-11 45.2 1.9 1.7 2 0 0 2 2 2 1 SNARE associated Golgi protein Response_reg PF00072.24 gi|433639075|ref|YP_007284835.1| - 1.5e-19 70.2 0.2 2.5e-19 69.5 0.2 1.3 1 0 0 1 1 1 1 Response regulator receiver domain HalX PF08663.10 gi|433639075|ref|YP_007284835.1| - 6e-07 29.7 3.8 1.7e-06 28.3 3.8 1.7 1 0 0 1 1 1 1 HalX domain Beta_lactamase3 PF17030.5 gi|433639075|ref|YP_007284835.1| - 0.03 13.6 0.0 0.036 13.3 0.0 1.2 1 0 0 1 1 1 0 Putative beta-lactamase-like family Latarcin PF10279.9 gi|433639075|ref|YP_007284835.1| - 0.059 13.8 1.0 0.094 13.1 0.9 1.5 1 1 0 1 1 1 0 Latarcin precursor zf-Mss51 PF13824.6 gi|433639076|ref|YP_007284836.1| - 0.16 12.1 7.0 0.21 11.7 7.0 1.2 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Ribonuc_red_lgC PF02867.15 gi|433639077|ref|YP_007284837.1| - 5.1e-149 497.2 0.0 6.7e-149 496.8 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|433639077|ref|YP_007284837.1| - 3.5e-23 81.4 0.0 8.9e-23 80.1 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain Amidohydro_2 PF04909.14 gi|433639078|ref|YP_007284838.1| - 7.4e-53 180.2 0.6 9.1e-53 179.9 0.6 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|433639078|ref|YP_007284838.1| - 0.00024 20.6 0.0 0.0025 17.2 0.0 2.1 1 1 0 1 1 1 1 TatD related DNase Dr_adhesin PF12393.8 gi|433639079|ref|YP_007284839.1| - 2.2 8.7 5.4 8.3 6.9 0.6 2.6 2 1 0 2 2 2 0 Dr family adhesin GATase PF00117.28 gi|433639080|ref|YP_007284840.1| - 7.1e-45 153.1 0.0 8e-45 152.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433639080|ref|YP_007284840.1| - 1.2e-05 25.2 0.0 4.1e-05 23.4 0.0 1.7 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|433639081|ref|YP_007284841.1| - 1.2e-87 293.7 0.0 4e-87 292.0 0.0 1.8 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|433639081|ref|YP_007284841.1| - 9.9e-16 58.2 0.0 4e-13 49.8 0.0 3.5 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region CarboxypepD_reg PF13620.6 gi|433639081|ref|YP_007284841.1| - 0.01 16.1 1.1 0.031 14.5 0.2 2.2 2 0 0 2 2 2 0 Carboxypeptidase regulatory-like domain PRAI PF00697.22 gi|433639082|ref|YP_007284842.1| - 2.5e-38 131.8 0.0 2.9e-38 131.6 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.17 gi|433639082|ref|YP_007284842.1| - 0.032 13.5 0.5 0.26 10.6 0.1 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase UPF0180 PF03698.13 gi|433639082|ref|YP_007284842.1| - 0.047 13.9 0.1 0.15 12.3 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) HalOD1 PF18545.1 gi|433639082|ref|YP_007284842.1| - 0.079 13.2 3.4 0.15 12.3 0.7 2.6 2 1 0 2 2 2 0 Halobacterial output domain 1 DeoC PF01791.9 gi|433639082|ref|YP_007284842.1| - 0.11 12.1 1.5 13 5.3 0.0 2.7 2 1 1 3 3 3 0 DeoC/LacD family aldolase Glycos_transf_3 PF00591.21 gi|433639083|ref|YP_007284843.1| - 1.4e-92 309.9 5.3 1.8e-92 309.5 5.3 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|433639083|ref|YP_007284843.1| - 1.3e-15 56.9 3.4 1.3e-13 50.6 2.8 2.5 2 0 0 2 2 2 2 Glycosyl transferase family, helical bundle domain DUF2717 PF10911.8 gi|433639083|ref|YP_007284843.1| - 0.02 14.6 0.0 0.048 13.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) DUF4337 PF14235.6 gi|433639084|ref|YP_007284844.1| - 0.005 17.0 0.8 0.0094 16.1 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4337) AAA_9 PF12781.7 gi|433639084|ref|YP_007284844.1| - 0.089 11.9 1.3 0.14 11.3 1.3 1.2 1 0 0 1 1 1 0 ATP-binding dynein motor region SlyX PF04102.12 gi|433639084|ref|YP_007284844.1| - 0.097 13.3 0.9 0.21 12.2 0.9 1.4 1 0 0 1 1 1 0 SlyX MtrB PF05440.12 gi|433639084|ref|YP_007284844.1| - 0.14 12.6 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B SpoIIIAH PF12685.7 gi|433639085|ref|YP_007284845.1| - 0.005 16.7 4.5 0.0066 16.3 4.5 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein TAD2 PF18521.1 gi|433639085|ref|YP_007284845.1| - 0.0082 16.0 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 Transactivation domain 2 URO-D PF01208.17 gi|433639085|ref|YP_007284845.1| - 0.0094 15.1 0.0 0.013 14.6 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF3717 PF12512.8 gi|433639085|ref|YP_007284845.1| - 0.08 12.8 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3717) Sigma70_ner PF04546.13 gi|433639085|ref|YP_007284845.1| - 1.3 8.8 5.9 11 5.9 5.9 2.0 1 1 0 1 1 1 0 Sigma-70, non-essential region NosL PF05573.12 gi|433639086|ref|YP_007284846.1| - 7.8e-10 39.2 0.0 1e-09 38.8 0.0 1.2 1 0 0 1 1 1 1 NosL Zn-ribbon_8 PF09723.10 gi|433639088|ref|YP_007284848.1| - 0.039 14.1 0.3 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 Zinc ribbon domain NAD_binding_4 PF07993.12 gi|433639090|ref|YP_007284850.1| - 5.7e-44 150.2 0.0 7.8e-44 149.8 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 gi|433639090|ref|YP_007284850.1| - 2.9e-19 69.5 0.0 4.4e-19 68.9 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|433639090|ref|YP_007284850.1| - 5e-11 42.1 0.2 9.8e-10 37.9 0.6 2.2 2 1 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|433639090|ref|YP_007284850.1| - 2.3e-09 37.1 0.0 6e-09 35.7 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|433639090|ref|YP_007284850.1| - 2.8e-06 26.7 0.1 7.7e-06 25.2 0.1 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|433639090|ref|YP_007284850.1| - 9.2e-06 25.7 0.1 0.0011 18.8 0.1 2.3 1 1 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 gi|433639090|ref|YP_007284850.1| - 0.0059 15.8 0.0 0.022 13.9 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Aldedh PF00171.22 gi|433639091|ref|YP_007284851.1| - 7.2e-150 499.5 0.0 8.9e-150 499.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|433639091|ref|YP_007284851.1| - 0.004 16.2 0.0 0.0063 15.6 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) HAD_2 PF13419.6 gi|433639092|ref|YP_007284852.1| - 1.4e-17 64.3 0.0 1.7e-17 64.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433639092|ref|YP_007284852.1| - 1.5e-10 41.7 1.1 6.4e-10 39.7 1.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433639092|ref|YP_007284852.1| - 3.9e-07 30.7 1.0 4.9e-07 30.3 1.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433639092|ref|YP_007284852.1| - 7.6e-07 29.1 1.0 1.4e-06 28.2 0.1 2.0 3 0 0 3 3 3 1 HAD-hyrolase-like Enterotoxin_b PF01376.18 gi|433639092|ref|YP_007284852.1| - 0.099 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain Hydrolase_6 PF13344.6 gi|433639092|ref|YP_007284852.1| - 0.18 11.9 0.1 1.6 8.9 0.0 2.2 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF445 PF04286.12 gi|433639093|ref|YP_007284853.1| - 0.029 14.2 2.2 0.046 13.5 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF445) COMPASS-Shg1 PF05205.12 gi|433639093|ref|YP_007284853.1| - 0.33 11.7 2.6 1.1 10.0 0.2 2.6 2 1 0 2 2 2 0 COMPASS (Complex proteins associated with Set1p) component shg1 Lactonase PF10282.9 gi|433639094|ref|YP_007284854.1| - 1.3e-13 50.9 0.3 6.9e-05 22.3 0.0 3.5 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|433639094|ref|YP_007284854.1| - 5.4e-07 29.5 0.2 0.018 14.7 0.0 3.2 2 1 0 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region Cytochrom_D1 PF02239.16 gi|433639094|ref|YP_007284854.1| - 6e-06 25.0 0.1 0.2 10.1 0.0 3.1 1 1 2 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.21 gi|433639094|ref|YP_007284854.1| - 0.00032 20.6 7.8 0.36 10.9 0.0 5.0 5 0 0 5 5 5 2 NHL repeat PD40 PF07676.12 gi|433639094|ref|YP_007284854.1| - 0.0048 16.8 0.0 1.8 8.6 0.0 3.8 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat DUF5046 PF16465.5 gi|433639094|ref|YP_007284854.1| - 0.058 12.8 0.6 0.11 11.9 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5046) Virul_fac_BrkB PF03631.15 gi|433639095|ref|YP_007284855.1| - 1.7e-44 152.4 29.6 2.2e-44 152.0 29.6 1.0 1 0 0 1 1 1 1 Virulence factor BrkB CAP PF00188.26 gi|433639096|ref|YP_007284856.1| - 1.5e-15 58.2 0.4 3.2e-15 57.1 0.1 1.7 2 0 0 2 2 2 1 Cysteine-rich secretory protein family CBS PF00571.28 gi|433639098|ref|YP_007284858.1| - 4e-33 113.6 8.7 3.4e-11 43.4 0.1 4.4 4 0 0 4 4 4 4 CBS domain Ribosomal_S30AE PF02482.19 gi|433639098|ref|YP_007284858.1| - 0.0025 18.5 0.1 0.0067 17.2 0.1 1.8 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Rad51 PF08423.11 gi|433639100|ref|YP_007284860.1| - 2e-27 96.1 0.0 2.5e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 gi|433639100|ref|YP_007284860.1| - 5.1e-12 45.8 0.9 7.6e-12 45.2 0.9 1.1 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 gi|433639100|ref|YP_007284860.1| - 4.9e-11 42.6 1.6 1.7e-10 40.8 1.6 1.8 1 1 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|433639100|ref|YP_007284860.1| - 1.2e-08 34.7 0.0 2.7e-08 33.5 0.0 1.6 1 1 0 1 1 1 1 KaiC Zot PF05707.12 gi|433639100|ref|YP_007284860.1| - 4.3e-08 33.0 0.0 5.7e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_24 PF13479.6 gi|433639100|ref|YP_007284860.1| - 1.2e-06 28.4 0.0 7.5e-06 25.8 0.0 2.0 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|433639100|ref|YP_007284860.1| - 0.0002 20.8 0.1 0.00098 18.5 0.1 1.9 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|433639100|ref|YP_007284860.1| - 0.00033 20.4 0.0 0.0009 19.0 0.0 1.6 1 1 1 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|433639100|ref|YP_007284860.1| - 0.011 16.1 0.2 0.018 15.4 0.2 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|433639100|ref|YP_007284860.1| - 0.12 12.8 0.1 0.31 11.5 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1_Xtn PF16897.5 gi|433639102|ref|YP_007284862.1| - 1.3e-28 99.1 1.8 1.6e-28 98.8 0.9 1.6 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|433639102|ref|YP_007284862.1| - 8.6e-24 83.8 0.0 1.9e-23 82.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|433639102|ref|YP_007284862.1| - 9.1e-15 54.5 3.0 1.9e-11 43.7 0.1 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B TGS PF02824.21 gi|433639102|ref|YP_007284862.1| - 2.2e-12 46.8 0.0 3.6e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 TGS domain RsgA_GTPase PF03193.16 gi|433639102|ref|YP_007284862.1| - 2e-06 27.8 1.0 0.039 13.8 0.1 3.1 3 1 0 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 gi|433639102|ref|YP_007284862.1| - 1.4e-05 25.2 0.6 0.099 12.7 0.3 2.7 1 1 1 2 2 2 2 Dynamin family AIG1 PF04548.16 gi|433639102|ref|YP_007284862.1| - 0.00098 18.5 0.0 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 AIG1 family GTP_EFTU PF00009.27 gi|433639102|ref|YP_007284862.1| - 0.0097 15.5 0.0 0.1 12.1 0.0 2.5 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 gi|433639102|ref|YP_007284862.1| - 0.012 15.0 0.0 0.027 13.9 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit MeaB PF03308.16 gi|433639102|ref|YP_007284862.1| - 0.012 14.6 0.3 0.8 8.6 0.0 2.8 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Arf PF00025.21 gi|433639102|ref|YP_007284862.1| - 0.02 14.3 0.2 2.3 7.7 0.0 2.6 2 1 0 2 2 2 0 ADP-ribosylation factor family Ras PF00071.22 gi|433639102|ref|YP_007284862.1| - 0.029 14.0 0.0 1.1 8.9 0.0 2.5 1 1 1 2 2 2 0 Ras family Roc PF08477.13 gi|433639102|ref|YP_007284862.1| - 0.035 14.3 0.0 0.26 11.5 0.0 2.2 2 1 1 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 gi|433639102|ref|YP_007284862.1| - 0.061 13.7 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|433639102|ref|YP_007284862.1| - 0.067 13.7 0.1 0.33 11.4 0.0 2.0 2 0 0 2 2 2 0 ABC transporter SLBB PF10531.9 gi|433639102|ref|YP_007284862.1| - 0.079 12.8 0.0 0.21 11.5 0.0 1.7 1 0 0 1 1 1 0 SLBB domain Na_H_antiporter PF03553.14 gi|433639103|ref|YP_007284863.1| - 2.3e-64 217.6 18.6 5.7e-64 216.2 14.9 2.3 1 1 1 2 2 2 2 Na+/H+ antiporter family Glyoxalase PF00903.25 gi|433639104|ref|YP_007284864.1| - 3.9e-17 62.6 6.8 1.1e-09 38.6 1.1 2.3 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|433639104|ref|YP_007284864.1| - 4.5e-10 39.8 1.3 0.00014 22.1 0.1 4.0 2 2 1 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|433639104|ref|YP_007284864.1| - 3.6e-06 27.7 6.5 0.011 16.5 0.3 2.2 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|433639104|ref|YP_007284864.1| - 1.7e-05 25.0 6.8 0.022 14.8 0.9 2.9 1 1 1 2 2 2 2 Glyoxalase-like domain DUF2092 PF09865.9 gi|433639105|ref|YP_007284865.1| - 0.00012 21.5 0.0 0.0048 16.3 0.0 2.2 1 1 1 2 2 2 1 Predicted periplasmic protein (DUF2092) DUF4245 PF14030.6 gi|433639105|ref|YP_007284865.1| - 0.00019 21.5 2.3 0.00019 21.5 2.3 2.5 2 1 1 3 3 3 1 Protein of unknown function (DUF4245) DUF4367 PF14285.6 gi|433639105|ref|YP_007284865.1| - 0.00046 20.6 0.0 0.006 17.0 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4367) LolA_like PF17131.4 gi|433639105|ref|YP_007284865.1| - 0.00065 19.5 0.5 0.0056 16.4 0.1 2.5 2 1 1 3 3 3 1 Outer membrane lipoprotein-sorting protein LolA PF03548.15 gi|433639105|ref|YP_007284865.1| - 0.16 11.7 0.0 1.1 9.0 0.0 2.2 1 1 0 1 1 1 0 Outer membrane lipoprotein carrier protein LolA Myco_19_kDa PF05481.12 gi|433639105|ref|YP_007284865.1| - 1.3 9.3 5.4 3.2 8.1 1.5 3.1 3 2 1 4 4 4 0 Mycobacterium 19 kDa lipoprotein antigen Pyr_redox_2 PF07992.14 gi|433639106|ref|YP_007284866.1| - 9.9e-43 146.4 1.6 1.3e-42 146.1 1.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Glutaredoxin PF00462.24 gi|433639106|ref|YP_007284866.1| - 6.8e-18 64.6 0.1 1.9e-17 63.2 0.1 1.8 1 0 0 1 1 1 1 Glutaredoxin Pyr_redox_3 PF13738.6 gi|433639106|ref|YP_007284866.1| - 1.7e-17 63.6 0.1 9.7e-15 54.6 0.0 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433639106|ref|YP_007284866.1| - 1.3e-16 61.0 0.5 1.5e-14 54.3 0.1 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433639106|ref|YP_007284866.1| - 2.2e-05 23.7 0.2 0.0084 15.2 0.0 3.2 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.24 gi|433639106|ref|YP_007284866.1| - 3.3e-05 23.6 5.8 0.026 14.1 0.1 3.0 2 1 2 4 4 4 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|433639106|ref|YP_007284866.1| - 0.00019 20.3 0.4 0.5 9.0 0.0 3.0 4 0 0 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|433639106|ref|YP_007284866.1| - 0.00057 20.1 0.2 0.004 17.3 0.0 2.4 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain GST_N_3 PF13417.6 gi|433639106|ref|YP_007284866.1| - 0.00092 19.6 0.0 0.0017 18.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain FAD_oxidored PF12831.7 gi|433639106|ref|YP_007284866.1| - 0.0012 18.3 0.8 0.0024 17.3 0.1 1.8 3 0 0 3 3 3 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|433639106|ref|YP_007284866.1| - 0.0032 17.9 0.0 0.1 13.0 0.0 2.7 3 1 0 3 3 2 1 Putative NAD(P)-binding DUF836 PF05768.14 gi|433639106|ref|YP_007284866.1| - 0.0049 17.3 0.0 0.014 15.8 0.0 1.8 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) SH3BGR PF04908.15 gi|433639106|ref|YP_007284866.1| - 0.026 14.7 0.0 0.049 13.8 0.0 1.5 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein Thioredoxin_3 PF13192.6 gi|433639106|ref|YP_007284866.1| - 0.03 14.4 0.0 0.36 10.9 0.1 2.4 2 0 0 2 2 2 0 Thioredoxin domain Trp_halogenase PF04820.14 gi|433639106|ref|YP_007284866.1| - 0.055 12.3 0.4 11 4.7 0.0 2.8 3 0 0 3 3 3 0 Tryptophan halogenase GIDA PF01134.22 gi|433639106|ref|YP_007284866.1| - 0.3 10.1 2.3 1.7 7.7 0.2 2.8 3 1 0 4 4 4 0 Glucose inhibited division protein A DUF357 PF04010.13 gi|433639107|ref|YP_007284867.1| - 4.5e-31 106.7 0.2 5.2e-31 106.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) TFIIB PF00382.19 gi|433639108|ref|YP_007284868.1| - 9.8e-37 124.8 0.0 8.1e-19 67.4 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|433639108|ref|YP_007284868.1| - 9.9e-17 60.2 4.1 2.2e-16 59.1 4.1 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_C PF02984.19 gi|433639108|ref|YP_007284868.1| - 0.00064 19.8 0.0 0.0057 16.7 0.0 2.1 2 0 0 2 2 2 1 Cyclin, C-terminal domain Sigma70_r4 PF04545.16 gi|433639108|ref|YP_007284868.1| - 0.0044 16.5 4.1 0.022 14.3 0.0 3.6 4 0 0 4 4 4 1 Sigma-70, region 4 DNA_ligase_ZBD PF03119.16 gi|433639108|ref|YP_007284868.1| - 0.021 14.9 3.3 0.057 13.4 3.3 1.9 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain OrfB_Zn_ribbon PF07282.11 gi|433639108|ref|YP_007284868.1| - 0.036 14.0 1.0 0.069 13.1 1.0 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DZR PF12773.7 gi|433639108|ref|YP_007284868.1| - 0.056 13.5 1.0 0.1 12.7 1.0 1.3 1 0 0 1 1 1 0 Double zinc ribbon HTH_24 PF13412.6 gi|433639108|ref|YP_007284868.1| - 0.097 12.2 0.2 0.25 11.0 0.2 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding zf-ribbon_3 PF13248.6 gi|433639108|ref|YP_007284868.1| - 0.13 11.7 3.1 0.45 10.0 3.1 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|433639108|ref|YP_007284868.1| - 0.13 12.0 0.4 0.25 11.1 0.4 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger A2L_zn_ribbon PF08792.10 gi|433639108|ref|YP_007284868.1| - 0.17 11.6 0.7 0.3 10.8 0.7 1.4 1 0 0 1 1 1 0 A2L zinc ribbon domain TrmB PF01978.19 gi|433639108|ref|YP_007284868.1| - 0.22 11.5 1.7 0.4 10.6 0.5 2.0 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Zn-ribbon_8 PF09723.10 gi|433639108|ref|YP_007284868.1| - 0.76 9.9 5.6 3.2 8.0 0.8 2.4 1 1 1 2 2 2 0 Zinc ribbon domain Nudix_N_2 PF14803.6 gi|433639108|ref|YP_007284868.1| - 0.86 9.6 4.0 2 8.4 3.1 2.1 1 1 1 2 2 2 0 Nudix N-terminal HypA PF01155.19 gi|433639109|ref|YP_007284869.1| - 0.0034 17.4 0.2 0.0035 17.3 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PhnA_Zn_Ribbon PF08274.12 gi|433639109|ref|YP_007284869.1| - 0.0035 17.3 3.3 0.26 11.3 0.3 2.2 2 0 0 2 2 2 2 PhnA Zinc-Ribbon zinc_ribbon_10 PF10058.9 gi|433639109|ref|YP_007284869.1| - 0.0038 16.9 0.1 0.0044 16.7 0.1 1.1 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein TackOD1 PF18551.1 gi|433639109|ref|YP_007284869.1| - 0.0042 16.8 0.2 0.005 16.5 0.2 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 Zn_Tnp_IS1 PF03811.13 gi|433639109|ref|YP_007284869.1| - 0.0061 16.3 1.4 0.96 9.2 0.4 2.1 2 0 0 2 2 2 2 InsA N-terminal domain NMD3 PF04981.13 gi|433639109|ref|YP_007284869.1| - 0.0075 15.8 0.1 0.0075 15.8 0.1 1.0 1 0 0 1 1 1 1 NMD3 family Stc1 PF12898.7 gi|433639109|ref|YP_007284869.1| - 0.0093 16.5 0.4 0.01 16.4 0.4 1.1 1 0 0 1 1 1 1 Stc1 domain TF_Zn_Ribbon PF08271.12 gi|433639109|ref|YP_007284869.1| - 0.014 14.9 0.6 1.2 8.7 0.1 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 gi|433639109|ref|YP_007284869.1| - 0.019 14.9 0.8 0.94 9.5 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF1610 PF07754.11 gi|433639109|ref|YP_007284869.1| - 0.021 14.8 3.5 3.2 7.8 1.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-CHY PF05495.12 gi|433639109|ref|YP_007284869.1| - 0.033 14.7 2.0 0.58 10.7 2.6 1.9 1 1 1 2 2 2 0 CHY zinc finger DZR PF12773.7 gi|433639109|ref|YP_007284869.1| - 0.042 13.9 2.2 0.066 13.2 2.2 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf-LITAF-like PF10601.9 gi|433639109|ref|YP_007284869.1| - 0.059 13.6 1.1 2.9 8.2 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|433639109|ref|YP_007284869.1| - 0.12 12.4 2.5 0.64 10.0 2.4 1.8 1 1 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.7 gi|433639109|ref|YP_007284869.1| - 0.18 11.8 4.5 0.22 11.5 0.4 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Rubredoxin PF00301.20 gi|433639109|ref|YP_007284869.1| - 0.85 9.7 6.6 0.51 10.4 0.7 2.2 1 1 1 2 2 2 0 Rubredoxin Zn-ribbon_8 PF09723.10 gi|433639109|ref|YP_007284869.1| - 0.86 9.8 4.8 7.4 6.8 0.4 2.2 1 1 1 2 2 2 0 Zinc ribbon domain zf-TFIIB PF13453.6 gi|433639109|ref|YP_007284869.1| - 1.7 8.0 5.8 1.4 8.3 0.5 2.1 1 1 1 2 2 2 0 Transcription factor zinc-finger UPF0058 PF01893.16 gi|433639110|ref|YP_007284870.1| - 2.1e-19 69.6 0.0 2.4e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 DUF555 PF04475.12 gi|433639111|ref|YP_007284871.1| - 7.6e-37 125.7 0.1 1e-36 125.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF555) PH_5 PF15405.6 gi|433639111|ref|YP_007284871.1| - 0.22 11.6 0.1 0.32 11.1 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain HhH-GPD PF00730.25 gi|433639112|ref|YP_007284872.1| - 1.8e-15 57.3 0.0 2.7e-15 56.7 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 gi|433639112|ref|YP_007284872.1| - 7.6e-05 22.8 0.0 0.00013 22.1 0.0 1.3 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HHH_5 PF14520.6 gi|433639112|ref|YP_007284872.1| - 0.15 12.7 0.0 4.7 7.9 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix domain Hydrolase_4 PF12146.8 gi|433639113|ref|YP_007284873.1| - 0.045 13.0 0.0 0.086 12.1 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Lactamase_B_2 PF12706.7 gi|433639113|ref|YP_007284873.1| - 0.053 13.0 3.7 1.2 8.7 2.4 2.9 2 2 0 2 2 2 0 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|433639113|ref|YP_007284873.1| - 0.14 12.1 0.0 0.41 10.6 0.0 1.8 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Acylphosphatase PF00708.18 gi|433639114|ref|YP_007284874.1| - 1.2e-25 89.7 0.0 1.4e-25 89.5 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase Carb_kinase PF01256.17 gi|433639116|ref|YP_007284876.1| - 2e-40 138.8 1.1 3.6e-40 138.0 1.1 1.4 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|433639116|ref|YP_007284876.1| - 2e-36 125.5 1.8 2e-36 125.5 1.8 1.9 3 0 0 3 3 3 1 YjeF-related protein N-terminus Phos_pyr_kin PF08543.12 gi|433639116|ref|YP_007284876.1| - 8.3e-05 22.1 0.0 0.00017 21.0 0.0 1.5 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase HK PF02110.15 gi|433639116|ref|YP_007284876.1| - 0.00058 19.3 0.9 0.0031 17.0 0.1 2.1 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family MoaC PF01967.21 gi|433639117|ref|YP_007284877.1| - 5.4e-47 159.3 2.4 7.3e-47 158.9 2.4 1.2 1 0 0 1 1 1 1 MoaC family Lar_restr_allev PF14354.6 gi|433639118|ref|YP_007284878.1| - 0.00036 20.9 7.7 0.01 16.2 0.2 3.3 2 1 0 3 3 3 2 Restriction alleviation protein Lar CpXC PF14353.6 gi|433639118|ref|YP_007284878.1| - 0.013 15.5 3.5 0.022 14.8 0.0 2.7 2 1 1 3 3 3 0 CpXC protein TF_Zn_Ribbon PF08271.12 gi|433639118|ref|YP_007284878.1| - 0.013 15.0 11.5 0.84 9.2 1.8 3.9 3 1 0 3 3 3 0 TFIIB zinc-binding DZR PF12773.7 gi|433639118|ref|YP_007284878.1| - 0.014 15.4 4.7 2.7 8.1 0.6 2.8 2 1 0 2 2 2 0 Double zinc ribbon Elf1 PF05129.13 gi|433639118|ref|YP_007284878.1| - 0.029 14.4 0.6 2.4 8.2 0.1 2.7 3 0 0 3 3 3 0 Transcription elongation factor Elf1 like HTH_20 PF12840.7 gi|433639118|ref|YP_007284878.1| - 0.086 12.9 0.0 0.22 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Nudix_N_2 PF14803.6 gi|433639118|ref|YP_007284878.1| - 0.11 12.5 12.0 0.58 10.1 0.4 3.5 3 0 0 3 3 3 0 Nudix N-terminal ADK_lid PF05191.14 gi|433639118|ref|YP_007284878.1| - 0.22 11.5 1.4 1.2 9.2 0.0 2.9 3 1 0 3 3 3 0 Adenylate kinase, active site lid Zn_Tnp_IS1595 PF12760.7 gi|433639118|ref|YP_007284878.1| - 2.1 8.4 7.6 13 5.9 0.1 3.2 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433639118|ref|YP_007284878.1| - 2.2 8.5 13.4 1.8 8.7 0.1 4.0 3 1 1 4 4 4 0 Zinc ribbon domain DUF1272 PF06906.11 gi|433639118|ref|YP_007284878.1| - 5.1 7.3 6.9 4.8 7.3 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1272) zf-Mss51 PF13824.6 gi|433639118|ref|YP_007284878.1| - 8.7 6.5 11.4 19 5.5 0.5 3.5 2 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 Proteasome PF00227.26 gi|433639119|ref|YP_007284879.1| - 3.9e-44 150.4 0.0 8.2e-44 149.4 0.0 1.5 1 1 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|433639119|ref|YP_007284879.1| - 4.9e-12 45.3 0.2 8.5e-12 44.5 0.2 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Proteasome PF00227.26 gi|433639120|ref|YP_007284880.1| - 9.3e-39 132.9 0.0 1.1e-38 132.7 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit PGM_PMM_I PF02878.16 gi|433639121|ref|YP_007284881.1| - 1.1e-35 122.3 0.7 2e-34 118.3 0.1 2.3 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|433639121|ref|YP_007284881.1| - 1.2e-19 70.8 0.3 3.4e-19 69.4 0.3 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|433639121|ref|YP_007284881.1| - 5.9e-12 45.6 0.1 1.9e-11 44.0 0.1 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 gi|433639121|ref|YP_007284881.1| - 0.00096 19.3 0.1 0.0019 18.4 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III dCMP_cyt_deam_1 PF00383.23 gi|433639124|ref|YP_007284884.1| - 9.9e-17 60.7 0.3 1.2e-16 60.5 0.3 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_2 PF08211.12 gi|433639124|ref|YP_007284884.1| - 5.3e-11 42.9 0.3 8.5e-11 42.2 0.3 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Pentapeptide PF00805.22 gi|433639124|ref|YP_007284884.1| - 0.0082 15.8 0.6 0.018 14.7 0.3 1.6 2 0 0 2 2 2 1 Pentapeptide repeats (8 copies) Fer2_4 PF13510.6 gi|433639124|ref|YP_007284884.1| - 0.0086 16.1 0.5 0.016 15.2 0.5 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MafB19-deam PF14437.6 gi|433639124|ref|YP_007284884.1| - 0.057 13.2 0.3 0.083 12.6 0.3 1.3 1 1 0 1 1 1 0 MafB19-like deaminase DUF488 PF04343.13 gi|433639125|ref|YP_007284885.1| - 2.3e-07 31.5 0.9 5e-07 30.3 0.9 1.6 1 1 0 1 1 1 1 Protein of unknown function, DUF488 PNP_UDP_1 PF01048.20 gi|433639126|ref|YP_007284886.1| - 9.6e-45 152.6 2.4 1.1e-44 152.4 2.4 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily MS_channel PF00924.18 gi|433639127|ref|YP_007284887.1| - 1.5e-16 60.6 4.5 1.5e-16 60.6 4.5 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|433639127|ref|YP_007284887.1| - 5.3e-08 32.7 13.0 9.2e-08 31.9 0.1 3.4 3 0 0 3 3 3 2 Conserved TM helix GcpE PF04551.14 gi|433639127|ref|YP_007284887.1| - 0.079 12.0 0.1 0.1 11.7 0.1 1.1 1 0 0 1 1 1 0 GcpE protein DisA_N PF02457.16 gi|433639128|ref|YP_007284888.1| - 1.8e-21 75.9 0.0 3e-21 75.2 0.0 1.3 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding PGF-CTERM PF18204.1 gi|433639129|ref|YP_007284889.1| - 2.6e-06 27.2 4.6 2.6e-06 27.2 4.6 2.6 3 0 0 3 3 3 1 PGF-CTERM motif Big_2 PF02368.18 gi|433639129|ref|YP_007284889.1| - 0.16 11.9 0.0 0.16 11.9 0.0 5.3 4 1 1 5 5 5 0 Bacterial Ig-like domain (group 2) ASH PF15780.5 gi|433639129|ref|YP_007284889.1| - 0.38 11.0 5.6 2.8 8.2 0.0 4.5 4 2 2 6 6 6 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PhnA_Zn_Ribbon PF08274.12 gi|433639130|ref|YP_007284890.1| - 0.19 11.7 1.2 1.4 9.0 1.2 2.0 1 1 0 1 1 1 0 PhnA Zinc-Ribbon TrmB PF01978.19 gi|433639131|ref|YP_007284891.1| - 0.00044 20.1 0.0 0.00067 19.5 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|433639131|ref|YP_007284891.1| - 0.0015 19.0 0.2 0.0052 17.2 0.1 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|433639131|ref|YP_007284891.1| - 0.0087 15.9 0.1 0.017 15.0 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|433639131|ref|YP_007284891.1| - 0.029 14.4 0.1 0.062 13.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|433639131|ref|YP_007284891.1| - 0.032 13.8 1.3 0.065 12.8 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 gi|433639131|ref|YP_007284891.1| - 0.032 14.0 0.2 0.11 12.4 0.2 1.8 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_15 PF12324.8 gi|433639131|ref|YP_007284891.1| - 0.098 12.6 0.4 0.31 11.0 0.1 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase MarR_2 PF12802.7 gi|433639134|ref|YP_007284894.1| - 4.2e-08 33.0 0.0 7.9e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433639134|ref|YP_007284894.1| - 1.9e-07 30.5 0.0 2.8e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|433639134|ref|YP_007284894.1| - 1.1e-05 25.4 0.0 1.5e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|433639134|ref|YP_007284894.1| - 2.3e-05 24.2 0.0 4e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_29 PF13551.6 gi|433639134|ref|YP_007284894.1| - 9.7e-05 22.3 0.0 0.00018 21.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix RP-C PF03428.13 gi|433639134|ref|YP_007284894.1| - 0.00013 21.6 0.0 0.00021 21.0 0.0 1.5 1 1 0 1 1 1 1 Replication protein C N-terminal domain MarR PF01047.22 gi|433639134|ref|YP_007284894.1| - 0.00021 21.2 0.0 0.00031 20.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|433639134|ref|YP_007284894.1| - 0.00045 20.2 0.0 0.00072 19.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|433639134|ref|YP_007284894.1| - 0.00061 19.9 0.0 0.001 19.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|433639134|ref|YP_007284894.1| - 0.00094 19.0 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|433639134|ref|YP_007284894.1| - 0.00098 18.9 0.0 0.0015 18.2 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_36 PF13730.6 gi|433639134|ref|YP_007284894.1| - 0.0013 18.6 0.0 0.0019 18.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|433639134|ref|YP_007284894.1| - 0.0022 17.6 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|433639134|ref|YP_007284894.1| - 0.0027 17.5 0.1 0.0048 16.7 0.0 1.5 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_DeoR PF08220.12 gi|433639134|ref|YP_007284894.1| - 0.0029 17.3 0.0 0.0046 16.7 0.0 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF1403 PF07183.11 gi|433639134|ref|YP_007284894.1| - 0.0038 16.8 0.0 0.0047 16.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1403) Rrf2 PF02082.20 gi|433639134|ref|YP_007284894.1| - 0.006 16.9 0.0 0.0094 16.3 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_5 PF01022.20 gi|433639134|ref|YP_007284894.1| - 0.016 15.1 0.0 0.034 14.0 0.0 1.6 2 0 0 2 2 1 0 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 gi|433639134|ref|YP_007284894.1| - 0.02 14.4 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 Phage_rep_O PF04492.13 gi|433639134|ref|YP_007284894.1| - 0.028 15.0 0.0 0.042 14.4 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage replication protein O HTH_AsnC-type PF13404.6 gi|433639134|ref|YP_007284894.1| - 0.033 14.0 0.0 0.084 12.7 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain PaaX PF07848.12 gi|433639134|ref|YP_007284894.1| - 0.041 14.1 0.1 0.083 13.1 0.1 1.5 1 0 0 1 1 1 0 PaaX-like protein HTH_23 PF13384.6 gi|433639134|ref|YP_007284894.1| - 0.047 13.5 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_17 PF12728.7 gi|433639134|ref|YP_007284894.1| - 0.049 13.8 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_8 PF02954.19 gi|433639134|ref|YP_007284894.1| - 0.072 12.9 0.0 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family DUF2848 PF11010.8 gi|433639134|ref|YP_007284894.1| - 0.077 12.6 0.0 0.18 11.4 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2848) HTH_3 PF01381.22 gi|433639134|ref|YP_007284894.1| - 0.083 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix Mga PF05043.13 gi|433639134|ref|YP_007284894.1| - 0.09 13.4 0.0 0.33 11.6 0.0 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain Penicillinase_R PF03965.16 gi|433639134|ref|YP_007284894.1| - 0.16 12.4 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Penicillinase repressor HTH_45 PF14947.6 gi|433639134|ref|YP_007284894.1| - 0.17 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DUF5613 PF18467.1 gi|433639135|ref|YP_007284895.1| - 0.17 12.3 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5613) TFIIB PF00382.19 gi|433639136|ref|YP_007284896.1| - 3.4e-05 23.8 0.1 9.3e-05 22.4 0.1 1.7 1 1 0 1 1 1 1 Transcription factor TFIIB repeat HTH_28 PF13518.6 gi|433639136|ref|YP_007284896.1| - 0.043 14.0 1.0 0.16 12.1 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|433639136|ref|YP_007284896.1| - 0.14 11.9 1.5 0.25 11.2 0.1 2.1 2 1 0 2 2 2 0 Homeodomain-like domain CTP_transf_like PF01467.26 gi|433639137|ref|YP_007284897.1| - 6e-12 46.0 0.0 7.2e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|433639137|ref|YP_007284897.1| - 0.0069 16.3 0.1 0.024 14.5 0.1 1.8 2 0 0 2 2 2 1 FAD synthetase PTA_PTB PF01515.19 gi|433639138|ref|YP_007284898.1| - 5.2e-94 315.1 0.0 7e-94 314.7 0.0 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 gi|433639138|ref|YP_007284898.1| - 2.7e-30 105.5 0.1 5.4e-28 98.0 0.0 2.6 2 1 0 2 2 2 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|433639138|ref|YP_007284898.1| - 1.4e-20 73.7 0.2 3.6e-20 72.3 0.2 1.7 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain EpsG PF14897.6 gi|433639140|ref|YP_007284900.1| - 0.06 12.6 3.0 0.063 12.6 1.5 1.7 1 1 1 2 2 2 0 EpsG family UPF0182 PF03699.13 gi|433639140|ref|YP_007284900.1| - 0.18 9.9 0.9 0.21 9.7 0.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) YjcB PF15940.5 gi|433639140|ref|YP_007284900.1| - 0.91 9.7 5.5 0.31 11.3 0.3 2.5 1 1 2 3 3 3 0 Family of unknown function DUF4229 PF14012.6 gi|433639140|ref|YP_007284900.1| - 0.93 9.6 12.6 0.74 9.9 0.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) DUF87 PF01935.17 gi|433639141|ref|YP_007284901.1| - 2.8e-11 44.0 0.3 2e-10 41.1 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain DUF853 PF05872.12 gi|433639141|ref|YP_007284901.1| - 4.5e-05 22.2 0.1 0.01 14.5 0.1 2.3 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_16 PF13191.6 gi|433639141|ref|YP_007284901.1| - 0.00012 22.5 0.0 0.00024 21.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|433639141|ref|YP_007284901.1| - 0.0002 21.8 0.0 0.001 19.5 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CbiA PF01656.23 gi|433639141|ref|YP_007284901.1| - 0.0011 19.0 0.0 0.0019 18.3 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain APS_kinase PF01583.20 gi|433639141|ref|YP_007284901.1| - 0.02 14.8 0.0 0.039 13.9 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase TrwB_AAD_bind PF10412.9 gi|433639141|ref|YP_007284901.1| - 0.024 13.6 0.2 0.06 12.2 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Zeta_toxin PF06414.12 gi|433639141|ref|YP_007284901.1| - 0.076 12.3 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_29 PF13555.6 gi|433639141|ref|YP_007284901.1| - 0.19 11.5 0.3 0.47 10.2 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain GHMP_kinases_N PF00288.26 gi|433639142|ref|YP_007284902.1| - 2.4e-13 50.1 2.9 2.4e-13 50.1 2.9 2.6 4 0 0 4 4 4 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|433639142|ref|YP_007284902.1| - 7.8e-08 32.6 0.1 1.8e-07 31.4 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal SOR_SNZ PF01680.17 gi|433639143|ref|YP_007284903.1| - 4.3e-101 337.0 8.4 5.6e-101 336.6 8.4 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|433639143|ref|YP_007284903.1| - 5.2e-09 35.8 5.3 3.9e-05 23.1 0.6 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|433639143|ref|YP_007284903.1| - 0.0038 16.4 2.4 0.88 8.6 0.1 2.2 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) OMPdecase PF00215.24 gi|433639143|ref|YP_007284903.1| - 0.0096 15.5 0.3 1.4 8.4 0.1 2.4 1 1 1 2 2 2 2 Orotidine 5'-phosphate decarboxylase / HUMPS family IGPS PF00218.21 gi|433639143|ref|YP_007284903.1| - 0.017 14.3 0.1 0.23 10.6 0.0 2.2 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase DUF1405 PF07187.11 gi|433639144|ref|YP_007284904.1| - 8.2e-48 162.4 14.1 1e-47 162.1 14.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1405) DUF2198 PF09964.9 gi|433639144|ref|YP_007284904.1| - 0.047 13.7 2.0 2.1 8.5 0.3 2.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF2070 PF09843.9 gi|433639144|ref|YP_007284904.1| - 0.57 8.4 9.0 0.68 8.2 9.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3948 PF13134.6 gi|433639144|ref|YP_007284904.1| - 1.2 8.8 5.3 3.5 7.4 5.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) HTH_20 PF12840.7 gi|433639145|ref|YP_007284905.1| - 0.00016 21.7 1.4 0.00087 19.3 1.4 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|433639145|ref|YP_007284905.1| - 0.0039 17.0 0.0 1.4 8.8 0.0 2.2 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family DprA_WH PF17782.1 gi|433639145|ref|YP_007284905.1| - 0.0062 16.6 1.6 0.0062 16.6 1.6 1.7 2 0 0 2 2 2 1 DprA winged helix domain 3-alpha PF03475.14 gi|433639145|ref|YP_007284905.1| - 0.19 11.7 1.9 3.8 7.5 0.3 2.4 2 0 0 2 2 2 0 3-alpha domain tRNA-synt_1 PF00133.22 gi|433639146|ref|YP_007284906.1| - 4.4e-123 411.6 0.0 1e-121 407.1 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|433639146|ref|YP_007284906.1| - 2.5e-32 111.9 0.1 4.9e-32 111.0 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|433639146|ref|YP_007284906.1| - 1.2e-20 73.6 0.1 3.5e-09 35.9 0.0 3.3 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|433639146|ref|YP_007284906.1| - 3.2e-06 26.8 0.0 1.5e-05 24.6 0.0 2.0 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|433639146|ref|YP_007284906.1| - 0.00032 20.1 0.0 0.0064 15.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|433639146|ref|YP_007284906.1| - 0.0044 16.0 0.0 0.011 14.7 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (K) Zn-ribbon_8 PF09723.10 gi|433639146|ref|YP_007284906.1| - 0.046 13.8 3.0 0.79 9.9 0.7 2.7 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|433639146|ref|YP_007284906.1| - 0.049 13.6 0.4 2.1 8.4 0.1 2.4 2 0 0 2 2 2 0 Double zinc ribbon MMPL PF03176.15 gi|433639147|ref|YP_007284907.1| - 6e-16 58.3 55.0 1.1e-06 27.8 20.1 3.8 4 1 0 4 4 4 3 MMPL family Sterol-sensing PF12349.8 gi|433639147|ref|YP_007284907.1| - 1.3e-09 38.1 7.1 0.0003 20.7 2.5 3.6 3 0 0 3 3 3 3 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.19 gi|433639147|ref|YP_007284907.1| - 7.8e-05 20.5 4.8 0.00026 18.8 0.0 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family Patched PF02460.18 gi|433639147|ref|YP_007284907.1| - 8.7e-05 20.8 9.0 0.27 9.3 0.0 3.3 3 0 0 3 3 3 3 Patched family HTH_20 PF12840.7 gi|433639150|ref|YP_007284910.1| - 2.6e-14 53.0 0.0 4.2e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433639150|ref|YP_007284910.1| - 2.1e-05 24.0 0.0 4.5e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433639150|ref|YP_007284910.1| - 2.5e-05 24.1 0.0 5.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|433639150|ref|YP_007284910.1| - 0.00071 19.4 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FaeA PF04703.12 gi|433639150|ref|YP_007284910.1| - 0.0035 17.7 0.0 0.0064 16.8 0.0 1.4 1 0 0 1 1 1 1 FaeA-like protein TrmB PF01978.19 gi|433639150|ref|YP_007284910.1| - 0.0041 17.0 0.0 0.0076 16.1 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2513 PF10711.9 gi|433639150|ref|YP_007284910.1| - 0.02 15.2 0.0 0.034 14.4 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) BLACT_WH PF17778.1 gi|433639150|ref|YP_007284910.1| - 0.022 14.7 0.0 0.046 13.7 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain TMEM238 PF15125.6 gi|433639150|ref|YP_007284910.1| - 0.046 13.9 1.1 0.062 13.5 0.2 1.6 2 0 0 2 2 2 0 TMEM238 protein family HTH_12 PF08461.10 gi|433639150|ref|YP_007284910.1| - 0.079 12.9 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain DUF2250 PF10007.9 gi|433639150|ref|YP_007284910.1| - 0.25 11.4 0.0 0.41 10.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Toprim_4 PF13662.6 gi|433639151|ref|YP_007284911.1| - 6.2e-10 39.4 0.1 1.9e-09 37.8 0.1 1.8 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|433639151|ref|YP_007284911.1| - 2.9e-05 24.4 0.0 7.6e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|433639151|ref|YP_007284911.1| - 0.14 12.4 0.1 1.4 9.2 0.1 2.4 1 1 0 1 1 1 0 Toprim domain DUF92 PF01940.16 gi|433639152|ref|YP_007284912.1| - 3.2e-47 160.9 17.8 3.2e-47 160.9 17.8 2.9 2 2 0 2 2 2 1 Integral membrane protein DUF92 Prenyltransf PF01255.19 gi|433639153|ref|YP_007284913.1| - 3.5e-23 82.3 0.0 5.1e-23 81.8 0.0 1.3 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase NrsF PF06532.11 gi|433639154|ref|YP_007284914.1| - 0.0012 18.6 3.4 0.0014 18.4 3.4 1.0 1 0 0 1 1 1 1 Negative regulator of sigma F Prenyltransf PF01255.19 gi|433639155|ref|YP_007284915.1| - 6.6e-67 225.3 0.0 8.2e-67 225.0 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase ADH_zinc_N PF00107.26 gi|433639155|ref|YP_007284915.1| - 0.14 12.1 0.1 0.92 9.5 0.0 2.3 2 1 0 2 2 2 0 Zinc-binding dehydrogenase GlutR_N PF05201.15 gi|433639157|ref|YP_007284917.1| - 1.7e-33 115.4 0.0 4.5e-33 114.1 0.0 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|433639157|ref|YP_007284917.1| - 1.1e-28 100.1 0.2 2.5e-28 98.9 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|433639157|ref|YP_007284917.1| - 1.7e-20 73.3 1.3 3.5e-20 72.3 1.3 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|433639157|ref|YP_007284917.1| - 0.00073 19.8 0.2 0.023 14.9 0.1 2.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|433639157|ref|YP_007284917.1| - 0.014 16.0 0.1 0.041 14.5 0.1 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|433639157|ref|YP_007284917.1| - 0.024 14.9 0.3 0.12 12.7 0.3 2.3 1 1 0 1 1 1 0 TrkA-N domain ThiF PF00899.21 gi|433639157|ref|YP_007284917.1| - 0.025 13.9 0.0 0.052 12.9 0.0 1.4 1 0 0 1 1 1 0 ThiF family GFO_IDH_MocA PF01408.22 gi|433639157|ref|YP_007284917.1| - 0.089 13.6 0.3 0.24 12.2 0.1 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Nitro_FeMo-Co PF02579.17 gi|433639157|ref|YP_007284917.1| - 0.15 12.4 0.5 1.3 9.4 0.3 2.6 3 0 0 3 3 3 0 Dinitrogenase iron-molybdenum cofactor Pterin_4a PF01329.19 gi|433639158|ref|YP_007284918.1| - 9.1e-25 86.7 0.0 1.1e-24 86.4 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase HAD_2 PF13419.6 gi|433639160|ref|YP_007284920.1| - 6.8e-09 36.0 0.0 1.4e-08 35.1 0.0 1.5 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433639160|ref|YP_007284920.1| - 0.00011 22.7 0.4 0.00033 21.1 0.4 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433639160|ref|YP_007284920.1| - 0.0002 21.7 0.0 0.26 11.6 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase TB PF00683.17 gi|433639160|ref|YP_007284920.1| - 0.64 9.8 4.6 1.1 9.0 0.7 2.2 2 0 0 2 2 2 0 TB domain HTH_10 PF04967.12 gi|433639161|ref|YP_007284921.1| - 3e-19 68.5 0.1 5.3e-19 67.8 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639161|ref|YP_007284921.1| - 8.2e-08 32.3 4.8 1.4e-07 31.6 4.8 1.3 1 0 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433639161|ref|YP_007284921.1| - 0.00013 21.4 0.7 0.00037 19.9 0.7 1.7 1 1 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433639161|ref|YP_007284921.1| - 0.00018 21.3 0.1 0.00092 19.1 0.1 2.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433639161|ref|YP_007284921.1| - 0.0011 18.5 0.1 0.0027 17.2 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|433639161|ref|YP_007284921.1| - 0.0015 18.2 0.4 0.014 15.0 0.4 2.2 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_AsnC-type PF13404.6 gi|433639161|ref|YP_007284921.1| - 0.0023 17.7 0.6 0.0023 17.7 0.6 2.2 3 0 0 3 3 2 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 gi|433639161|ref|YP_007284921.1| - 0.014 15.4 0.9 0.92 9.6 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|433639161|ref|YP_007284921.1| - 0.027 14.5 0.0 0.052 13.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_22 PF13309.6 gi|433639161|ref|YP_007284921.1| - 0.03 14.4 0.0 0.062 13.4 0.0 1.5 1 0 0 1 1 1 0 HTH domain Homeodomain PF00046.29 gi|433639161|ref|YP_007284921.1| - 0.037 13.9 0.0 0.084 12.7 0.0 1.6 1 0 0 1 1 1 0 Homeodomain HTH_32 PF13565.6 gi|433639161|ref|YP_007284921.1| - 0.039 14.6 0.1 0.079 13.6 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_50 PF18024.1 gi|433639161|ref|YP_007284921.1| - 0.055 13.1 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|433639161|ref|YP_007284921.1| - 0.058 13.5 0.1 0.2 11.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.6 gi|433639161|ref|YP_007284921.1| - 0.06 13.2 0.2 0.19 11.5 0.2 1.8 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain TetR_N PF00440.23 gi|433639161|ref|YP_007284921.1| - 0.067 13.0 2.0 0.18 11.6 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_psq PF05225.16 gi|433639161|ref|YP_007284921.1| - 0.07 12.9 0.2 0.29 10.9 0.1 2.2 2 1 0 2 2 2 0 helix-turn-helix, Psq domain Phage_CI_repr PF07022.13 gi|433639161|ref|YP_007284921.1| - 0.13 12.4 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain NepR PF18557.1 gi|433639161|ref|YP_007284921.1| - 0.14 11.9 0.5 0.47 10.1 0.1 2.2 2 0 0 2 2 2 0 Anti-sigma factor NepR HTH_AraC PF00165.23 gi|433639161|ref|YP_007284921.1| - 0.2 11.8 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family UPF0122 PF04297.14 gi|433639161|ref|YP_007284921.1| - 0.24 11.7 0.0 0.47 10.7 0.0 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like MoeA_N PF03453.17 gi|433639162|ref|YP_007284922.1| - 6.5e-41 139.7 5.0 1.6e-40 138.5 5.0 1.6 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|433639162|ref|YP_007284922.1| - 1.1e-25 90.0 0.0 2.2e-25 89.0 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain PBP_like PF12727.7 gi|433639162|ref|YP_007284922.1| - 1.9e-18 66.3 0.0 7.1e-18 64.4 0.0 2.0 1 1 0 1 1 1 1 PBP superfamily domain MoeA_C PF03454.15 gi|433639162|ref|YP_007284922.1| - 4.3e-09 36.4 0.1 2.9e-08 33.8 0.1 2.5 1 1 0 1 1 1 1 MoeA C-terminal region (domain IV) LysR_substrate PF03466.20 gi|433639162|ref|YP_007284922.1| - 1.2e-05 24.8 2.6 0.026 13.9 0.1 2.6 2 0 0 2 2 2 2 LysR substrate binding domain GIDE PF12483.8 gi|433639163|ref|YP_007284923.1| - 1.4e-09 37.6 0.2 3.4e-06 26.5 0.1 3.2 2 1 0 2 2 2 2 E3 Ubiquitin ligase DUF2721 PF11026.8 gi|433639163|ref|YP_007284923.1| - 0.0066 16.3 4.7 0.056 13.3 0.2 2.8 2 1 0 3 3 3 2 Protein of unknown function (DUF2721) DUF4131 PF13567.6 gi|433639163|ref|YP_007284923.1| - 0.1 12.2 0.1 0.1 12.2 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) HSP20 PF00011.21 gi|433639164|ref|YP_007284924.1| - 2.8e-13 49.9 0.0 3.4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|433639164|ref|YP_007284924.1| - 7.4e-06 25.4 0.1 1.2e-05 24.8 0.1 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DUF1100 PF06500.11 gi|433639164|ref|YP_007284924.1| - 0.12 11.1 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) ABC1 PF03109.16 gi|433639165|ref|YP_007284925.1| - 3.3e-29 101.5 0.0 1e-28 99.9 0.0 1.8 2 0 0 2 2 2 1 ABC1 family APH PF01636.23 gi|433639165|ref|YP_007284925.1| - 0.0012 18.9 10.6 0.0023 17.9 2.3 3.3 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|433639165|ref|YP_007284925.1| - 0.0082 15.5 0.0 0.016 14.6 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain DUF3325 PF11804.8 gi|433639165|ref|YP_007284925.1| - 0.069 13.3 3.6 1 9.6 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) TetR_C_25 PF17933.1 gi|433639165|ref|YP_007284925.1| - 0.086 13.2 0.7 4.4 7.7 0.1 2.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain WaaY PF06176.11 gi|433639165|ref|YP_007284925.1| - 0.19 11.3 0.1 0.3 10.7 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Aminotran_1_2 PF00155.21 gi|433639167|ref|YP_007284927.1| - 3.8e-38 131.6 0.0 9.6e-38 130.3 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433639167|ref|YP_007284927.1| - 1.6e-06 27.4 0.0 2.2e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|433639167|ref|YP_007284927.1| - 5.2e-05 22.3 0.0 7.3e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Allinase Beta_elim_lyase PF01212.21 gi|433639167|ref|YP_007284927.1| - 0.18 11.0 0.0 0.3 10.3 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase ADH_N PF08240.12 gi|433639168|ref|YP_007284928.1| - 5.8e-28 96.9 0.4 1.2e-27 95.9 0.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|433639168|ref|YP_007284928.1| - 2.3e-21 76.1 0.3 6.5e-21 74.7 0.0 1.9 3 0 0 3 3 3 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|433639168|ref|YP_007284928.1| - 6.2e-06 25.7 1.9 9.6e-06 25.0 1.9 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 gi|433639168|ref|YP_007284928.1| - 0.0015 19.5 0.0 0.0035 18.4 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 gi|433639168|ref|YP_007284928.1| - 0.0039 16.6 0.0 0.0069 15.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|433639168|ref|YP_007284928.1| - 0.0082 15.9 0.2 0.012 15.4 0.2 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase adh_short PF00106.25 gi|433639168|ref|YP_007284928.1| - 0.12 11.8 0.3 0.2 11.1 0.3 1.2 1 0 0 1 1 1 0 short chain dehydrogenase EFP_N PF08207.12 gi|433639169|ref|YP_007284929.1| - 0.0032 17.5 0.1 0.33 11.0 0.0 2.2 2 0 0 2 2 2 2 Elongation factor P (EF-P) KOW-like domain eIF-5a PF01287.20 gi|433639169|ref|YP_007284929.1| - 0.013 15.6 0.5 0.021 14.9 0.5 1.5 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP PF01132.20 gi|433639169|ref|YP_007284929.1| - 0.082 13.0 0.6 0.16 12.0 0.6 1.5 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain Arginase PF00491.21 gi|433639170|ref|YP_007284930.1| - 2.9e-52 177.9 0.9 3.6e-52 177.6 0.9 1.0 1 0 0 1 1 1 1 Arginase family DUF2391 PF09622.10 gi|433639171|ref|YP_007284931.1| - 1.2e-05 24.8 1.3 1.4e-05 24.6 1.3 1.1 1 0 0 1 1 1 1 Putative integral membrane protein (DUF2391) FixP_N PF14715.6 gi|433639171|ref|YP_007284931.1| - 0.054 13.2 0.1 0.14 11.9 0.0 1.7 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Saf_2TM PF18303.1 gi|433639171|ref|YP_007284931.1| - 6 6.5 6.3 1.5 8.4 2.9 1.6 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain FmdA_AmdA PF03069.15 gi|433639172|ref|YP_007284932.1| - 7.4e-33 113.9 4.0 2.7e-16 59.4 0.6 2.6 1 1 1 2 2 2 2 Acetamidase/Formamidase family DUF1858 PF08984.11 gi|433639172|ref|YP_007284932.1| - 0.035 14.3 0.0 0.086 13.0 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) DUF1160 PF06648.11 gi|433639173|ref|YP_007284933.1| - 0.0089 16.0 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1160) RHH_3 PF12651.7 gi|433639173|ref|YP_007284933.1| - 0.033 14.1 0.2 0.065 13.2 0.2 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain RHH_1 PF01402.21 gi|433639173|ref|YP_007284933.1| - 0.034 14.1 0.6 0.068 13.1 0.0 1.9 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family PSK_trans_fac PF07704.11 gi|433639173|ref|YP_007284933.1| - 0.063 14.0 0.7 0.13 13.0 0.7 1.8 1 1 0 1 1 1 0 Rv0623-like transcription factor NIF3 PF01784.18 gi|433639174|ref|YP_007284934.1| - 3e-52 177.7 0.0 3.5e-52 177.5 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) AP_endonuc_2 PF01261.24 gi|433639174|ref|YP_007284934.1| - 0.0025 17.3 0.1 0.0051 16.3 0.0 1.6 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel Glyoxalase_4 PF13669.6 gi|433639174|ref|YP_007284934.1| - 0.034 14.4 0.2 0.11 12.8 0.0 1.9 2 1 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSF PF00474.17 gi|433639176|ref|YP_007284936.1| - 3.6e-67 227.0 27.0 4.8e-67 226.6 27.0 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family CARDB PF07705.11 gi|433639178|ref|YP_007284938.1| - 0.052 13.8 0.0 0.11 12.7 0.0 1.6 1 1 0 1 1 1 0 CARDB PQQ_2 PF13360.6 gi|433639179|ref|YP_007284939.1| - 8.7e-30 104.1 14.0 7.9e-19 68.2 1.3 4.2 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|433639179|ref|YP_007284939.1| - 4.6e-27 93.8 27.9 6e-06 26.6 0.3 8.8 9 1 0 9 9 9 7 PQQ-like domain PQQ PF01011.21 gi|433639179|ref|YP_007284939.1| - 8.5e-16 57.0 8.2 0.0037 17.1 0.0 7.4 7 0 0 7 7 7 5 PQQ enzyme repeat AMP-binding PF00501.28 gi|433639180|ref|YP_007284940.1| - 4.8e-96 321.9 0.0 5.8e-96 321.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433639180|ref|YP_007284940.1| - 8.6e-23 81.1 0.0 2.6e-22 79.6 0.0 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 gi|433639180|ref|YP_007284940.1| - 0.043 12.7 0.1 6.3 5.5 0.0 2.1 2 0 0 2 2 2 0 GH3 auxin-responsive promoter HalOD1 PF18545.1 gi|433639181|ref|YP_007284941.1| - 2.6e-15 56.4 0.1 4.3e-15 55.7 0.1 1.3 1 0 0 1 1 1 1 Halobacterial output domain 1 HTH_IclR PF09339.10 gi|433639183|ref|YP_007284943.1| - 6.6e-07 29.0 0.7 1.8e-06 27.6 0.1 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|433639183|ref|YP_007284943.1| - 1.2e-05 25.2 0.3 3.4e-05 23.8 0.3 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433639183|ref|YP_007284943.1| - 6.7e-05 22.7 0.1 0.00019 21.3 0.1 1.7 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|433639183|ref|YP_007284943.1| - 0.00021 21.2 0.0 0.00047 20.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433639183|ref|YP_007284943.1| - 0.0009 18.8 0.0 0.0017 17.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|433639183|ref|YP_007284943.1| - 0.0021 17.9 0.0 0.0052 16.6 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|433639183|ref|YP_007284943.1| - 0.0029 17.6 0.0 0.0057 16.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|433639183|ref|YP_007284943.1| - 0.0034 17.3 0.0 0.0077 16.2 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|433639183|ref|YP_007284943.1| - 0.0039 17.1 0.0 0.0085 16.0 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|433639183|ref|YP_007284943.1| - 0.0075 16.1 0.0 0.017 15.0 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_32 PF13565.6 gi|433639183|ref|YP_007284943.1| - 0.01 16.4 0.1 1.3 9.6 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain Sigma54_DBD PF04552.13 gi|433639183|ref|YP_007284943.1| - 0.035 13.8 0.2 0.086 12.5 0.1 1.6 1 1 0 1 1 1 0 Sigma-54, DNA binding domain HTH_AsnC-type PF13404.6 gi|433639183|ref|YP_007284943.1| - 0.043 13.7 0.3 0.087 12.7 0.3 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain GntR PF00392.21 gi|433639183|ref|YP_007284943.1| - 0.052 13.2 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_7 PF02796.15 gi|433639183|ref|YP_007284943.1| - 0.053 13.6 0.1 0.97 9.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 gi|433639183|ref|YP_007284943.1| - 0.055 13.8 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator DUF1724 PF08350.10 gi|433639183|ref|YP_007284943.1| - 0.088 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) HTH_36 PF13730.6 gi|433639183|ref|YP_007284943.1| - 0.21 11.6 0.0 0.41 10.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 gi|433639186|ref|YP_007284946.1| - 1.6e-28 100.0 0.0 2.2e-28 99.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639186|ref|YP_007284946.1| - 5.4e-15 56.0 0.0 3.5e-09 36.9 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|433639186|ref|YP_007284946.1| - 3.1e-09 37.4 0.0 6.1e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|433639186|ref|YP_007284946.1| - 0.0012 19.4 0.0 0.0016 19.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433639186|ref|YP_007284946.1| - 0.0015 18.3 0.1 0.0031 17.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|433639186|ref|YP_007284946.1| - 0.0027 17.6 0.0 0.0039 17.1 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|433639186|ref|YP_007284946.1| - 0.0042 17.5 0.0 0.037 14.4 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|433639186|ref|YP_007284946.1| - 0.013 15.3 0.0 0.46 10.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 gi|433639186|ref|YP_007284946.1| - 0.017 14.5 0.0 2.9 7.3 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|433639186|ref|YP_007284946.1| - 0.062 12.7 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 gi|433639186|ref|YP_007284946.1| - 0.072 13.4 0.0 0.81 10.0 0.0 2.3 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|433639186|ref|YP_007284946.1| - 0.11 12.9 0.3 0.34 11.3 0.2 1.9 1 1 1 2 2 2 0 AAA ATPase domain ABC2_membrane PF01061.24 gi|433639187|ref|YP_007284947.1| - 1.1e-30 106.7 13.5 1.1e-30 106.7 13.5 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|433639187|ref|YP_007284947.1| - 5.5e-18 65.2 15.4 5.5e-18 65.2 15.4 1.2 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|433639187|ref|YP_007284947.1| - 0.0093 15.3 21.8 0.019 14.3 21.7 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein Fusion_gly PF00523.18 gi|433639187|ref|YP_007284947.1| - 1.9 6.6 12.1 0.095 10.9 1.0 2.2 1 1 1 2 2 2 0 Fusion glycoprotein F0 CheY-binding PF09078.11 gi|433639189|ref|YP_007284949.1| - 0.15 12.2 0.0 0.28 11.4 0.0 1.5 1 1 0 1 1 1 0 CheY binding Bac_rhodopsin PF01036.18 gi|433639190|ref|YP_007284950.1| - 1.5e-46 158.7 25.9 1.9e-46 158.4 25.9 1.1 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Putative_PNPOx PF01243.20 gi|433639192|ref|YP_007284952.1| - 1.7e-07 31.3 0.0 2.3e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase AbrB_C PF18277.1 gi|433639192|ref|YP_007284952.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 AbrB C-terminal domain Heliorhodopsin PF18761.1 gi|433639193|ref|YP_007284953.1| - 6.5e-99 330.1 16.8 7.4e-99 330.0 16.8 1.0 1 0 0 1 1 1 1 Heliorhodopsin Asp_Glu_race PF01177.22 gi|433639194|ref|YP_007284954.1| - 2.1e-51 174.9 0.0 2.4e-51 174.8 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Pantoate_transf PF02548.15 gi|433639194|ref|YP_007284954.1| - 0.017 14.5 0.1 0.038 13.4 0.1 1.5 2 0 0 2 2 2 0 Ketopantoate hydroxymethyltransferase VAPB_antitox PF02697.14 gi|433639195|ref|YP_007284955.1| - 9.1e-05 23.2 0.1 0.00014 22.5 0.1 1.5 1 1 0 1 1 1 1 Putative antitoxin SeqA_N PF17206.3 gi|433639195|ref|YP_007284955.1| - 0.025 13.9 0.7 0.054 12.8 0.7 1.5 1 1 0 1 1 1 0 SeqA protein N-terminal domain PIN PF01850.21 gi|433639196|ref|YP_007284956.1| - 4.2e-10 40.2 0.0 4.8e-10 40.0 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|433639196|ref|YP_007284956.1| - 0.13 12.1 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) MMR_HSR1_C PF08438.10 gi|433639197|ref|YP_007284957.1| - 3e-29 101.9 0.0 4.6e-29 101.2 0.0 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|433639197|ref|YP_007284957.1| - 3e-20 72.4 0.0 1.8e-19 69.9 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|433639197|ref|YP_007284957.1| - 4e-09 36.4 0.0 8.5e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|433639197|ref|YP_007284957.1| - 2.5e-06 27.1 0.0 6.9e-05 22.4 0.0 2.6 3 0 0 3 3 3 1 Ferrous iron transport protein B MeaB PF03308.16 gi|433639197|ref|YP_007284957.1| - 0.042 12.8 0.0 0.075 12.0 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB YSIRK_signal PF04650.17 gi|433639198|ref|YP_007284958.1| - 2.3 8.2 4.5 9.6 6.2 4.5 2.2 1 0 0 1 1 1 0 YSIRK type signal peptide Multi_Drug_Res PF00893.19 gi|433639200|ref|YP_007284960.1| - 8.9e-26 90.4 6.4 1.1e-25 90.1 6.4 1.2 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 gi|433639200|ref|YP_007284960.1| - 0.71 10.0 10.6 1.3 9.2 10.6 1.5 1 1 0 1 1 1 0 EamA-like transporter family Nmad3 PF18754.1 gi|433639201|ref|YP_007284961.1| - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 Glycos_transf_2 PF00535.26 gi|433639202|ref|YP_007284962.1| - 2.7e-27 95.7 0.0 3.4e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433639202|ref|YP_007284962.1| - 1.3e-11 44.8 0.6 1.3e-10 41.6 0.6 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|433639202|ref|YP_007284962.1| - 2.1e-08 34.6 0.0 4.1e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|433639202|ref|YP_007284962.1| - 5.4e-08 32.6 0.0 1.5e-07 31.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|433639202|ref|YP_007284962.1| - 4.7e-06 26.2 0.0 7.4e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 NTP_transf_3 PF12804.7 gi|433639202|ref|YP_007284962.1| - 1.5e-05 25.4 0.1 1.8e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glyco_trans_2_3 PF13632.6 gi|433639202|ref|YP_007284962.1| - 0.00011 22.1 0.0 0.00079 19.4 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family group 2 DAO PF01266.24 gi|433639203|ref|YP_007284963.1| - 1.4e-29 103.8 0.0 2.1e-29 103.2 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Mqo PF06039.15 gi|433639203|ref|YP_007284963.1| - 5.4e-29 101.1 0.0 5.8e-28 97.7 0.0 1.9 1 1 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Pyr_redox_2 PF07992.14 gi|433639203|ref|YP_007284963.1| - 1.3e-08 34.4 0.2 0.00016 21.0 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|433639203|ref|YP_007284963.1| - 2.3e-07 30.4 0.7 1.3e-05 24.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433639203|ref|YP_007284963.1| - 1.6e-05 24.2 0.1 2.1e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|433639203|ref|YP_007284963.1| - 7.3e-05 23.3 0.5 0.73 10.4 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433639203|ref|YP_007284963.1| - 0.00015 20.6 0.2 0.0023 16.7 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_9 PF13454.6 gi|433639203|ref|YP_007284963.1| - 0.0002 21.4 0.1 0.46 10.4 0.1 2.5 2 0 0 2 2 2 2 FAD-NAD(P)-binding Amino_oxidase PF01593.24 gi|433639203|ref|YP_007284963.1| - 0.0018 17.6 0.0 0.0028 17.0 0.0 1.4 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|433639203|ref|YP_007284963.1| - 0.01 16.1 0.0 0.036 14.3 0.0 2.0 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|433639203|ref|YP_007284963.1| - 0.039 12.8 3.3 0.8 8.5 3.3 2.3 1 1 0 1 1 1 0 Tryptophan halogenase DSBA PF01323.20 gi|433639204|ref|YP_007284964.1| - 1.2e-28 100.2 0.0 1.4e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|433639204|ref|YP_007284964.1| - 2.4e-06 27.8 0.0 4.7e-05 23.6 0.0 2.2 2 1 0 2 2 2 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433639204|ref|YP_007284964.1| - 0.022 15.2 0.4 2.4 8.7 0.0 2.4 2 1 0 2 2 2 0 Thioredoxin-like domain MapZ_EC1 PF18041.1 gi|433639204|ref|YP_007284964.1| - 0.14 12.4 0.3 2 8.6 0.1 2.2 1 1 1 2 2 2 0 MapZ extracellular domain 1 Glutaredoxin PF00462.24 gi|433639204|ref|YP_007284964.1| - 0.16 12.2 0.2 11 6.3 0.0 2.5 2 0 0 2 2 2 0 Glutaredoxin Usp PF00582.26 gi|433639205|ref|YP_007284965.1| - 1.2e-32 113.4 1.1 1.4e-32 113.1 1.1 1.1 1 0 0 1 1 1 1 Universal stress protein family tRNA-synt_2b PF00587.25 gi|433639206|ref|YP_007284966.1| - 9.5e-31 107.1 0.0 1.7e-30 106.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|433639206|ref|YP_007284966.1| - 2.5e-15 56.4 0.1 7.5e-15 54.9 0.1 1.9 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 gi|433639206|ref|YP_007284966.1| - 1.1e-13 51.1 0.0 1.9e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain TGS PF02824.21 gi|433639206|ref|YP_007284966.1| - 4.2e-11 42.7 0.1 1e-10 41.5 0.1 1.7 1 0 0 1 1 1 1 TGS domain Pribosyltran PF00156.27 gi|433639207|ref|YP_007284967.1| - 3.2e-16 59.2 2.0 5e-16 58.6 2.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|433639207|ref|YP_007284967.1| - 0.0016 17.9 0.1 0.0021 17.6 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|433639207|ref|YP_007284967.1| - 0.023 14.2 0.3 0.036 13.6 0.3 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase CarS-like PF01864.17 gi|433639208|ref|YP_007284968.1| - 8.4e-46 156.1 2.3 9.7e-46 155.9 2.3 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|433639208|ref|YP_007284968.1| - 0.00089 19.1 3.8 0.00089 19.1 3.8 2.2 1 1 1 2 2 2 1 Cytidylyltransferase family DDDD PF10161.9 gi|433639208|ref|YP_007284968.1| - 0.38 10.5 1.3 4.4 7.1 0.1 2.8 2 1 1 3 3 3 0 Putative mitochondrial precursor protein Rick_17kDa_Anti PF05433.15 gi|433639208|ref|YP_007284968.1| - 6.8 6.6 19.3 0.77 9.7 10.0 3.4 3 1 0 3 3 3 0 Glycine zipper 2TM domain Pro_dh PF01619.18 gi|433639209|ref|YP_007284969.1| - 2.6e-25 89.6 0.0 4e-25 89.0 0.0 1.3 1 0 0 1 1 1 1 Proline dehydrogenase RE_XamI PF09572.10 gi|433639209|ref|YP_007284969.1| - 0.018 14.7 0.1 0.028 14.1 0.1 1.2 1 0 0 1 1 1 0 XamI restriction endonuclease DUF502 PF04367.13 gi|433639210|ref|YP_007284970.1| - 4.8e-19 68.2 0.0 9e-19 67.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF502) DUF3687 PF12459.8 gi|433639210|ref|YP_007284970.1| - 4.5 6.9 6.2 0.45 10.1 0.7 2.0 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein Aminotran_4 PF01063.19 gi|433639211|ref|YP_007284971.1| - 1.9e-46 158.7 0.0 2.3e-46 158.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Coiled-coil_56 PF09813.9 gi|433639211|ref|YP_007284971.1| - 0.077 13.1 0.0 0.94 9.6 0.0 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 56 Na_H_antiporter PF03553.14 gi|433639212|ref|YP_007284972.1| - 2.9e-63 213.9 38.8 4e-55 187.2 17.8 2.3 1 1 1 2 2 2 2 Na+/H+ antiporter family DHBP_synthase PF00926.19 gi|433639213|ref|YP_007284973.1| - 7.3e-59 198.5 0.1 8.4e-59 198.3 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase CbiG_N PF11760.8 gi|433639213|ref|YP_007284973.1| - 0.018 15.0 0.4 1.5 8.8 0.0 2.4 2 0 0 2 2 2 0 Cobalamin synthesis G N-terminal CTP-dep_RFKase PF01982.16 gi|433639214|ref|YP_007284974.1| - 8.4e-47 158.2 0.0 1.3e-46 157.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_20 PF12840.7 gi|433639214|ref|YP_007284974.1| - 2.2e-08 34.0 0.4 4.2e-08 33.1 0.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|433639214|ref|YP_007284974.1| - 7.7e-08 31.8 0.1 1.3e-07 31.0 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433639214|ref|YP_007284974.1| - 3.1e-07 30.2 0.3 5.6e-07 29.4 0.3 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|433639214|ref|YP_007284974.1| - 3.6e-06 26.9 0.1 7.2e-06 25.9 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|433639214|ref|YP_007284974.1| - 1.2e-05 25.2 0.0 2.5e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 gi|433639214|ref|YP_007284974.1| - 3.9e-05 23.4 0.2 3.9e-05 23.4 0.2 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|433639214|ref|YP_007284974.1| - 0.00013 21.9 0.1 0.00021 21.2 0.1 1.3 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 gi|433639214|ref|YP_007284974.1| - 0.00058 20.0 0.0 0.0011 19.1 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.12 gi|433639214|ref|YP_007284974.1| - 0.00093 18.9 0.0 0.0017 18.1 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|433639214|ref|YP_007284974.1| - 0.0014 19.1 0.1 0.0023 18.4 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF3363 PF11843.8 gi|433639214|ref|YP_007284974.1| - 0.0048 15.9 0.1 0.0086 15.1 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3363) HTH_34 PF13601.6 gi|433639214|ref|YP_007284974.1| - 0.0056 16.8 0.0 0.059 13.6 0.0 2.1 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|433639214|ref|YP_007284974.1| - 0.006 16.4 0.2 0.0096 15.7 0.2 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|433639214|ref|YP_007284974.1| - 0.0064 16.4 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GntR PF00392.21 gi|433639214|ref|YP_007284974.1| - 0.0086 15.7 0.1 0.016 14.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 gi|433639214|ref|YP_007284974.1| - 0.017 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|433639214|ref|YP_007284974.1| - 0.019 15.3 0.0 0.03 14.7 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_10 PF04967.12 gi|433639214|ref|YP_007284974.1| - 0.029 14.2 0.1 0.059 13.2 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_1 PF00126.27 gi|433639214|ref|YP_007284974.1| - 0.04 13.9 0.2 0.094 12.7 0.2 1.6 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF4423 PF14394.6 gi|433639214|ref|YP_007284974.1| - 0.087 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_28 PF13518.6 gi|433639214|ref|YP_007284974.1| - 0.093 12.9 0.0 0.29 11.3 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_12 PF08461.10 gi|433639214|ref|YP_007284974.1| - 0.1 12.6 0.3 0.53 10.3 0.0 2.1 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_5 PF01022.20 gi|433639214|ref|YP_007284974.1| - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF2250 PF10007.9 gi|433639214|ref|YP_007284974.1| - 0.17 12.0 0.0 0.38 10.9 0.0 1.6 2 0 0 2 2 1 0 Uncharacterized protein conserved in archaea (DUF2250) Radical_SAM PF04055.21 gi|433639215|ref|YP_007284975.1| - 4.6e-13 49.9 0.0 7.8e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SAICAR_synt PF01259.18 gi|433639216|ref|YP_007284976.1| - 9.4e-23 81.1 0.0 2.3e-22 79.8 0.0 1.5 1 1 0 1 1 1 1 SAICAR synthetase FmdA_AmdA PF03069.15 gi|433639217|ref|YP_007284977.1| - 3.1e-56 190.9 0.0 2.7e-55 187.8 0.0 1.9 1 1 0 1 1 1 1 Acetamidase/Formamidase family Ribosomal_S27e PF01667.17 gi|433639217|ref|YP_007284977.1| - 0.031 14.0 0.0 0.058 13.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 DZR PF12773.7 gi|433639217|ref|YP_007284977.1| - 0.054 13.5 0.3 0.11 12.6 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.13 gi|433639217|ref|YP_007284977.1| - 0.06 13.0 2.8 0.5 10.1 0.1 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Lar_restr_allev PF14354.6 gi|433639217|ref|YP_007284977.1| - 0.13 12.6 0.5 0.25 11.8 0.5 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|433639217|ref|YP_007284977.1| - 0.21 11.3 1.7 3.8 7.4 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF4379 PF14311.6 gi|433639217|ref|YP_007284977.1| - 0.37 11.2 1.1 0.78 10.2 1.1 1.5 1 0 0 1 1 1 0 Probable Zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|433639217|ref|YP_007284977.1| - 0.44 10.0 3.1 9.7 5.8 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433639217|ref|YP_007284977.1| - 1 9.5 3.2 3.5 7.8 3.2 1.9 1 1 1 2 2 2 0 Zinc ribbon domain UPF0547 PF10571.9 gi|433639217|ref|YP_007284977.1| - 1.8 8.7 5.7 8.9 6.5 0.5 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DNA_ligase_ZBD PF03119.16 gi|433639217|ref|YP_007284977.1| - 3 8.0 9.0 7.5 6.7 0.1 3.3 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain PurS PF02700.14 gi|433639218|ref|YP_007284978.1| - 1.3e-23 82.9 0.0 1.5e-23 82.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|433639219|ref|YP_007284979.1| - 1.2e-41 142.6 0.0 1.5e-41 142.2 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|433639219|ref|YP_007284979.1| - 4.8e-06 26.5 0.0 6e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|433639219|ref|YP_007284979.1| - 0.00035 20.2 0.0 0.00063 19.4 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|433639219|ref|YP_007284979.1| - 0.0022 17.8 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family PAS_4 PF08448.10 gi|433639220|ref|YP_007284980.1| - 2.3e-35 121.2 14.2 2.7e-20 72.7 0.6 4.4 4 1 0 4 4 4 3 PAS fold PAS PF00989.25 gi|433639220|ref|YP_007284980.1| - 5.3e-27 94.1 0.6 2e-13 50.3 0.0 5.0 4 1 0 4 4 4 3 PAS fold PAS_9 PF13426.7 gi|433639220|ref|YP_007284980.1| - 1.3e-26 92.9 0.0 1e-07 32.1 0.0 3.6 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|433639220|ref|YP_007284980.1| - 4.5e-22 78.8 11.1 7.3e-10 39.3 0.9 4.0 3 0 0 3 3 3 3 GAF domain PAS_3 PF08447.12 gi|433639220|ref|YP_007284980.1| - 6.3e-16 58.4 0.0 1.3e-08 35.1 0.0 3.7 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|433639220|ref|YP_007284980.1| - 8.2e-15 54.4 0.5 0.00027 20.9 0.0 4.3 4 0 0 4 4 4 3 PAS domain HATPase_c PF02518.26 gi|433639220|ref|YP_007284980.1| - 4.5e-14 52.9 0.0 1e-13 51.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 gi|433639220|ref|YP_007284980.1| - 1.9e-11 44.7 2.4 7.6e-05 23.3 0.1 3.7 3 0 0 3 3 3 2 GAF domain HATPase_c_2 PF13581.6 gi|433639220|ref|YP_007284980.1| - 8.8e-09 35.4 0.6 1.7e-07 31.2 0.1 2.7 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain GAF_3 PF13492.6 gi|433639220|ref|YP_007284980.1| - 5.8e-07 29.9 1.0 0.14 12.5 0.1 3.8 3 0 0 3 3 3 2 GAF domain HATPase_c_5 PF14501.6 gi|433639220|ref|YP_007284980.1| - 0.0019 18.1 0.0 0.0041 17.0 0.0 1.4 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 gi|433639220|ref|YP_007284980.1| - 0.0041 16.7 0.0 0.012 15.2 0.0 1.8 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase MLTR_LBD PF17765.1 gi|433639220|ref|YP_007284980.1| - 0.0057 16.8 2.6 0.0083 16.3 0.4 2.5 2 0 0 2 2 2 1 MmyB-like transcription regulator ligand binding domain HisKA PF00512.25 gi|433639220|ref|YP_007284980.1| - 0.018 15.1 1.1 0.089 12.8 0.2 2.5 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain Pyrophosphatase PF00719.19 gi|433639221|ref|YP_007284981.1| - 1e-51 174.9 1.1 1.2e-51 174.7 1.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase PadR PF03551.14 gi|433639222|ref|YP_007284982.1| - 4.7e-17 61.7 0.8 6.7e-17 61.2 0.8 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|433639222|ref|YP_007284982.1| - 4.6e-05 24.0 0.1 6.4e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Replication terminator protein HTH_27 PF13463.6 gi|433639222|ref|YP_007284982.1| - 0.00046 20.6 0.0 0.00071 20.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|433639222|ref|YP_007284982.1| - 0.007 16.3 0.1 0.011 15.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|433639222|ref|YP_007284982.1| - 0.0086 15.9 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_34 PF13601.6 gi|433639222|ref|YP_007284982.1| - 0.093 12.9 0.0 0.19 12.0 0.0 1.6 1 1 1 2 2 2 0 Winged helix DNA-binding domain RVT_3 PF13456.6 gi|433639224|ref|YP_007284984.1| - 7.2e-24 84.0 0.0 1.2e-23 83.3 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|433639224|ref|YP_007284984.1| - 1.1e-11 45.1 0.1 3.5e-11 43.5 0.1 1.8 1 1 0 1 1 1 1 RNase H TFIIB PF00382.19 gi|433639225|ref|YP_007284985.1| - 9.4e-47 156.9 2.9 8.4e-26 89.8 0.2 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|433639225|ref|YP_007284985.1| - 2.6e-19 68.5 3.4 5.4e-19 67.4 3.4 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|433639225|ref|YP_007284985.1| - 2.3e-05 24.0 0.7 5.2e-05 22.8 0.7 1.6 1 0 0 1 1 1 1 A2L zinc ribbon domain HARE-HTH PF05066.13 gi|433639225|ref|YP_007284985.1| - 0.011 16.1 0.1 0.52 10.7 0.1 2.4 2 0 0 2 2 2 0 HB1, ASXL, restriction endonuclease HTH domain Zn_Tnp_IS1595 PF12760.7 gi|433639225|ref|YP_007284985.1| - 0.031 14.3 0.1 0.073 13.1 0.1 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|433639225|ref|YP_007284985.1| - 0.051 13.7 0.8 4.1 7.6 0.2 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Cyclin_C PF02984.19 gi|433639225|ref|YP_007284985.1| - 0.058 13.5 0.0 0.56 10.3 0.0 2.1 2 0 0 2 2 2 0 Cyclin, C-terminal domain Sigma70_r4 PF04545.16 gi|433639225|ref|YP_007284985.1| - 0.071 12.6 2.9 0.37 10.3 0.1 3.5 3 1 1 4 4 4 0 Sigma-70, region 4 Lar_restr_allev PF14354.6 gi|433639225|ref|YP_007284985.1| - 0.076 13.4 1.2 0.14 12.5 0.4 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar RPA_interact_C PF14768.6 gi|433639225|ref|YP_007284985.1| - 0.08 13.5 0.0 0.19 12.3 0.0 1.8 1 0 0 1 1 1 0 Replication protein A interacting C-terminal RB_B PF01857.20 gi|433639225|ref|YP_007284985.1| - 0.081 13.0 0.0 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 Retinoblastoma-associated protein B domain HTH_23 PF13384.6 gi|433639225|ref|YP_007284985.1| - 0.094 12.5 0.8 0.7 9.8 0.1 2.8 3 0 0 3 3 2 0 Homeodomain-like domain DUF2318 PF10080.9 gi|433639225|ref|YP_007284985.1| - 0.11 12.6 0.1 0.25 11.5 0.1 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF678 PF05077.12 gi|433639225|ref|YP_007284985.1| - 0.12 12.6 1.2 0.38 10.9 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF678) OrfB_Zn_ribbon PF07282.11 gi|433639225|ref|YP_007284985.1| - 0.12 12.3 1.1 0.36 10.8 0.8 1.9 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Ribosomal_S27e PF01667.17 gi|433639225|ref|YP_007284985.1| - 0.17 11.6 0.3 0.33 10.7 0.3 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 PhnA_Zn_Ribbon PF08274.12 gi|433639225|ref|YP_007284985.1| - 0.61 10.1 2.6 1.3 9.0 2.6 1.5 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Nre_N PF04894.12 gi|433639226|ref|YP_007284986.1| - 6.4e-97 324.6 0.0 7.9e-97 324.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|433639226|ref|YP_007284986.1| - 2.4e-40 136.9 0.1 4.3e-40 136.1 0.1 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal CPBP PF02517.16 gi|433639228|ref|YP_007284988.1| - 3.1e-06 27.5 4.7 1.4e-05 25.3 4.7 2.1 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease DUF2070 PF09843.9 gi|433639230|ref|YP_007284990.1| - 0.0095 14.3 0.8 0.013 13.8 0.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) DUF2157 PF09925.9 gi|433639230|ref|YP_007284990.1| - 0.027 14.3 8.7 0.11 12.3 6.8 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Virul_fac_BrkB PF03631.15 gi|433639230|ref|YP_007284990.1| - 0.27 10.8 11.5 0.87 9.1 11.6 1.7 1 1 0 1 1 1 0 Virulence factor BrkB DUF1772 PF08592.11 gi|433639230|ref|YP_007284990.1| - 0.4 11.0 7.5 27 5.1 8.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) zf-LITAF-like PF10601.9 gi|433639230|ref|YP_007284990.1| - 2 8.8 4.6 20 5.6 0.3 3.5 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain YdjM PF04307.14 gi|433639231|ref|YP_007284991.1| - 2.9e-09 36.5 6.5 5e-08 32.4 6.5 2.1 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|433639231|ref|YP_007284991.1| - 0.12 12.4 0.3 0.28 11.1 0.3 1.6 1 1 0 1 1 1 0 Zinc dependent phospholipase C CinA PF02464.17 gi|433639232|ref|YP_007284992.1| - 2.8e-56 189.4 0.2 3.2e-56 189.2 0.2 1.0 1 0 0 1 1 1 1 Competence-damaged protein Aminotran_1_2 PF00155.21 gi|433639233|ref|YP_007284993.1| - 5.7e-51 173.8 0.0 6.3e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|433639233|ref|YP_007284993.1| - 2.8e-05 23.3 0.0 4.5e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|433639233|ref|YP_007284993.1| - 5.2e-05 22.3 0.0 7.4e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Allinase Beta_elim_lyase PF01212.21 gi|433639233|ref|YP_007284993.1| - 0.0026 17.1 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|433639233|ref|YP_007284993.1| - 0.0031 16.9 0.1 0.005 16.2 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|433639233|ref|YP_007284993.1| - 0.0051 15.4 0.0 0.0066 15.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_3 PF00202.21 gi|433639233|ref|YP_007284993.1| - 0.019 13.6 0.0 0.041 12.5 0.0 1.5 2 0 0 2 2 2 0 Aminotransferase class-III ArsA_ATPase PF02374.15 gi|433639234|ref|YP_007284994.1| - 1.5e-75 254.3 0.0 5.2e-50 170.4 0.0 2.2 2 0 0 2 2 2 2 Anion-transporting ATPase CbiA PF01656.23 gi|433639234|ref|YP_007284994.1| - 5.6e-09 36.1 0.0 9.8e-09 35.3 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|433639234|ref|YP_007284994.1| - 1.8e-06 28.0 0.0 1.7e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|433639234|ref|YP_007284994.1| - 0.0028 17.2 2.0 0.0073 15.8 0.1 2.2 3 0 0 3 3 3 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|433639234|ref|YP_007284994.1| - 0.0091 15.5 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 gi|433639234|ref|YP_007284994.1| - 0.018 14.7 0.1 0.56 9.8 0.1 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|433639234|ref|YP_007284994.1| - 0.023 15.1 0.0 0.32 11.4 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Fer4_NifH PF00142.18 gi|433639234|ref|YP_007284994.1| - 0.03 13.8 0.0 0.047 13.1 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|433639234|ref|YP_007284994.1| - 0.083 12.5 0.7 0.29 10.7 0.0 2.2 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|433639234|ref|YP_007284994.1| - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein PhoH PF02562.16 gi|433639234|ref|YP_007284994.1| - 0.12 11.8 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein adh_short PF00106.25 gi|433639235|ref|YP_007284995.1| - 2.9e-51 173.7 0.0 3.6e-51 173.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|433639235|ref|YP_007284995.1| - 2.1e-41 142.0 0.0 2.8e-41 141.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|433639235|ref|YP_007284995.1| - 1.8e-13 50.8 0.0 2.7e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|433639235|ref|YP_007284995.1| - 1.8e-09 37.8 0.9 5.7e-09 36.1 0.9 1.8 1 1 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|433639235|ref|YP_007284995.1| - 1e-06 28.4 0.1 3.3e-06 26.7 0.0 1.9 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 gi|433639235|ref|YP_007284995.1| - 3.6e-05 23.3 0.0 5.7e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) RmlD_sub_bind PF04321.17 gi|433639235|ref|YP_007284995.1| - 0.00039 19.6 0.1 0.00089 18.4 0.1 1.5 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|433639235|ref|YP_007284995.1| - 0.065 12.8 0.0 0.097 12.2 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Eno-Rase_NADH_b PF12242.8 gi|433639235|ref|YP_007284995.1| - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TrkA_N PF02254.18 gi|433639235|ref|YP_007284995.1| - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain HTH_45 PF14947.6 gi|433639237|ref|YP_007284997.1| - 0.026 14.5 0.0 0.044 13.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix FUSC PF04632.12 gi|433639237|ref|YP_007284997.1| - 0.68 8.4 2.7 0.75 8.3 2.2 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family Endonuclease_5 PF04493.14 gi|433639239|ref|YP_007284999.1| - 1.1e-51 175.4 0.0 2.8e-51 174.0 0.0 1.6 1 1 0 1 1 1 1 Endonuclease V Rhomboid PF01694.22 gi|433639240|ref|YP_007285000.1| - 1.4e-24 86.8 16.4 1.4e-24 86.8 16.4 1.5 2 0 0 2 2 2 1 Rhomboid family zf-AN1 PF01428.16 gi|433639240|ref|YP_007285000.1| - 2e-11 43.8 9.2 2.9e-11 43.3 9.2 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger FYVE PF01363.21 gi|433639240|ref|YP_007285000.1| - 0.062 13.4 1.8 0.087 13.0 1.8 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-HIT PF04438.16 gi|433639240|ref|YP_007285000.1| - 1 9.3 4.1 1.5 8.7 4.1 1.2 1 0 0 1 1 1 0 HIT zinc finger DNA_pol_B_thumb PF14791.6 gi|433639242|ref|YP_007285002.1| - 2.4e-24 85.3 0.0 6.1e-24 84.0 0.0 1.7 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_8 PF14716.6 gi|433639242|ref|YP_007285002.1| - 1.3e-18 67.1 3.7 1.5e-15 57.3 0.2 3.7 2 1 1 3 3 3 2 Helix-hairpin-helix domain HHH_5 PF14520.6 gi|433639242|ref|YP_007285002.1| - 1.9e-16 60.4 2.1 3.3e-13 50.0 0.2 3.3 2 1 0 2 2 2 2 Helix-hairpin-helix domain PHP PF02811.19 gi|433639242|ref|YP_007285002.1| - 4.2e-09 36.9 0.0 6.2e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 PHP domain DNA_pol_lambd_f PF10391.9 gi|433639242|ref|YP_007285002.1| - 2.6e-05 24.0 0.0 0.00035 20.3 0.0 2.7 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|433639242|ref|YP_007285002.1| - 0.00032 20.4 0.1 0.0045 16.8 0.0 3.1 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|433639242|ref|YP_007285002.1| - 0.00048 20.3 0.0 1.3 9.3 0.0 3.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.6 gi|433639242|ref|YP_007285002.1| - 0.002 18.3 0.0 0.0047 17.1 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase beta palm HHH_2 PF12826.7 gi|433639242|ref|YP_007285002.1| - 0.0057 16.7 5.6 1.6 8.9 0.1 3.9 3 1 0 3 3 3 2 Helix-hairpin-helix motif Mut7-C PF01927.16 gi|433639243|ref|YP_007285003.1| - 3.1e-39 134.4 0.1 3.5e-39 134.2 0.1 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|433639243|ref|YP_007285003.1| - 6.1e-07 29.1 0.0 8.8e-07 28.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN_9 PF18477.1 gi|433639243|ref|YP_007285003.1| - 0.044 14.1 0.4 0.065 13.5 0.4 1.2 1 0 0 1 1 1 0 PIN like domain DUF4379 PF14311.6 gi|433639243|ref|YP_007285003.1| - 1.2 9.6 6.6 0.31 11.4 3.6 1.6 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Zn_ribbon_recom PF13408.6 gi|433639243|ref|YP_007285003.1| - 2.8 8.5 6.0 17 6.0 5.4 2.2 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain PHP_C PF13263.6 gi|433639245|ref|YP_007285005.1| - 5.6e-13 48.4 0.2 1e-12 47.6 0.2 1.4 1 0 0 1 1 1 1 PHP-associated zf-C2H2 PF00096.26 gi|433639246|ref|YP_007285006.1| - 0.028 14.9 0.0 4.3 8.0 0.0 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zinc_ribbon_15 PF17032.5 gi|433639246|ref|YP_007285006.1| - 0.11 13.3 0.1 0.17 12.6 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon family RepB_primase PF16793.5 gi|433639246|ref|YP_007285006.1| - 0.12 12.5 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 RepB DNA-primase from phage plasmid Zn-ribbon_8 PF09723.10 gi|433639246|ref|YP_007285006.1| - 0.22 11.7 1.5 0.4 10.8 1.5 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Spt5-NGN PF03439.13 gi|433639247|ref|YP_007285007.1| - 3.1e-24 84.7 0.1 4.8e-24 84.1 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|433639247|ref|YP_007285007.1| - 6.8e-08 32.2 0.8 1.3e-07 31.3 0.3 1.8 2 0 0 2 2 2 1 KOW motif potato_inhibit PF00280.18 gi|433639247|ref|YP_007285007.1| - 0.05 14.3 1.1 1.4 9.7 0.1 2.4 2 0 0 2 2 2 0 Potato inhibitor I family Glyco_hydro_65C PF03633.15 gi|433639247|ref|YP_007285007.1| - 0.1 12.6 0.2 0.19 11.7 0.2 1.5 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain DbpA PF03880.15 gi|433639247|ref|YP_007285007.1| - 0.12 12.4 0.2 0.31 11.1 0.1 1.7 2 0 0 2 2 2 0 DbpA RNA binding domain SecE PF00584.20 gi|433639248|ref|YP_007285008.1| - 2.9e-05 23.9 0.1 3.1e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex tRNA_SAD PF07973.14 gi|433639249|ref|YP_007285009.1| - 2.2e-10 40.5 0.2 4.5e-10 39.4 0.2 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2c PF01411.19 gi|433639249|ref|YP_007285009.1| - 4.5e-10 38.7 0.0 6.7e-10 38.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|433639249|ref|YP_007285009.1| - 5.7e-05 23.6 0.4 0.0001 22.7 0.4 1.4 1 0 0 1 1 1 1 DHHA1 domain HTH_31 PF13560.6 gi|433639250|ref|YP_007285010.1| - 5.2e-06 26.7 1.9 6.2e-06 26.5 0.7 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|433639250|ref|YP_007285010.1| - 0.0031 17.3 0.2 0.0058 16.5 0.2 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|433639250|ref|YP_007285010.1| - 0.0065 16.5 0.1 0.01 15.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|433639250|ref|YP_007285010.1| - 0.065 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain M_domain PF12938.7 gi|433639250|ref|YP_007285010.1| - 0.28 10.9 3.9 0.38 10.5 3.9 1.1 1 0 0 1 1 1 0 M domain of GW182 NUDIX PF00293.28 gi|433639251|ref|YP_007285011.1| - 2.3e-15 56.8 0.0 2.8e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain zf-TFIIB PF13453.6 gi|433639251|ref|YP_007285011.1| - 0.012 14.9 2.2 0.021 14.1 2.2 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger Nudix_N_2 PF14803.6 gi|433639251|ref|YP_007285011.1| - 0.018 15.0 4.0 0.04 13.9 4.0 1.6 1 0 0 1 1 1 0 Nudix N-terminal DZR PF12773.7 gi|433639251|ref|YP_007285011.1| - 0.078 13.0 0.8 0.15 12.1 0.8 1.4 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|433639251|ref|YP_007285011.1| - 0.24 11.2 2.2 0.77 9.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain CTP_transf_like PF01467.26 gi|433639252|ref|YP_007285012.1| - 3.3e-13 50.1 0.0 1.2e-12 48.2 0.0 1.8 1 1 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 gi|433639252|ref|YP_007285012.1| - 0.0014 18.4 0.0 0.0039 16.9 0.0 1.7 1 1 1 2 2 2 1 Citrate lyase ligase C-terminal domain TAT_signal PF10518.9 gi|433639253|ref|YP_007285013.1| - 0.0099 15.7 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Lon_C PF05362.13 gi|433639254|ref|YP_007285014.1| - 5.4e-33 114.3 4.8 4.1e-32 111.4 4.8 2.1 1 1 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|433639254|ref|YP_007285014.1| - 2.6e-29 102.4 0.0 3.2e-22 79.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|433639254|ref|YP_007285014.1| - 2.9e-17 62.8 0.1 5.3e-10 39.0 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|433639254|ref|YP_007285014.1| - 3.2e-14 53.0 0.0 4.5e-08 33.0 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|433639254|ref|YP_007285014.1| - 1.7e-09 37.8 0.0 0.0017 18.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|433639254|ref|YP_007285014.1| - 2.8e-07 30.4 0.4 2.7e-06 27.2 0.0 2.4 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase AAA PF00004.29 gi|433639254|ref|YP_007285014.1| - 5.5e-07 30.1 0.0 0.041 14.3 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|433639254|ref|YP_007285014.1| - 2e-06 27.1 0.1 0.052 12.6 0.0 2.4 2 0 0 2 2 2 2 MCM P-loop domain RuvB_N PF05496.12 gi|433639254|ref|YP_007285014.1| - 9.4e-06 25.5 0.1 0.0021 17.8 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|433639254|ref|YP_007285014.1| - 0.0001 22.6 0.0 0.44 10.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|433639254|ref|YP_007285014.1| - 0.0002 20.7 0.1 0.031 13.5 0.0 2.4 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|433639254|ref|YP_007285014.1| - 0.00021 21.6 0.0 0.0039 17.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 gi|433639254|ref|YP_007285014.1| - 0.00027 20.8 0.1 0.43 10.4 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|433639254|ref|YP_007285014.1| - 0.00035 20.1 0.0 0.0012 18.4 0.0 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 gi|433639254|ref|YP_007285014.1| - 0.0014 18.8 0.0 1.9 8.6 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain MCM_lid PF17855.1 gi|433639254|ref|YP_007285014.1| - 0.0015 18.9 0.1 0.0046 17.4 0.1 1.9 1 1 1 2 2 1 1 MCM AAA-lid domain AAA_30 PF13604.6 gi|433639254|ref|YP_007285014.1| - 0.0015 18.2 0.0 0.17 11.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_PrkA PF08298.11 gi|433639254|ref|YP_007285014.1| - 0.0034 16.3 0.0 0.076 11.9 0.0 2.1 2 0 0 2 2 2 1 PrkA AAA domain PhoH PF02562.16 gi|433639254|ref|YP_007285014.1| - 0.01 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein DUF815 PF05673.13 gi|433639254|ref|YP_007285014.1| - 0.013 14.7 0.0 0.026 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|433639254|ref|YP_007285014.1| - 0.018 15.2 0.0 0.057 13.6 0.0 1.9 2 0 0 2 2 1 0 AAA domain AAA_28 PF13521.6 gi|433639254|ref|YP_007285014.1| - 0.023 15.0 0.0 1.6 8.9 0.0 2.7 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|433639254|ref|YP_007285014.1| - 0.026 15.0 0.0 0.099 13.2 0.0 2.0 2 0 0 2 2 1 0 ABC transporter IstB_IS21 PF01695.17 gi|433639254|ref|YP_007285014.1| - 0.034 13.9 0.0 0.077 12.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|433639254|ref|YP_007285014.1| - 0.058 13.1 0.0 1.4 8.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain TrwB_AAD_bind PF10412.9 gi|433639254|ref|YP_007285014.1| - 0.069 12.1 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.12 gi|433639254|ref|YP_007285014.1| - 0.073 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AgrB PF04647.15 gi|433639254|ref|YP_007285014.1| - 0.093 12.0 0.3 0.14 11.5 0.3 1.2 1 0 0 1 1 1 0 Accessory gene regulator B AAA_18 PF13238.6 gi|433639254|ref|YP_007285014.1| - 0.13 12.9 0.3 0.64 10.6 0.0 2.4 3 0 0 3 3 2 0 AAA domain DUF5345 PF17280.2 gi|433639254|ref|YP_007285014.1| - 2 8.4 5.0 8.6 6.4 4.3 2.3 1 1 0 1 1 1 0 Family of unknown function (DUF5345) CPBP PF02517.16 gi|433639255|ref|YP_007285015.1| - 4.6e-13 49.4 10.5 4.6e-13 49.4 10.5 1.8 2 0 0 2 2 2 1 CPBP intramembrane metalloprotease LptF_LptG PF03739.14 gi|433639255|ref|YP_007285015.1| - 0.057 12.3 0.2 0.057 12.3 0.2 2.9 4 0 0 4 4 4 0 Lipopolysaccharide export system permease LptF/LptG FAP PF07174.11 gi|433639255|ref|YP_007285015.1| - 0.13 11.7 10.1 0.22 10.9 10.1 1.3 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5337 PF17272.2 gi|433639256|ref|YP_007285016.1| - 1.9 8.3 11.4 0.13 12.1 1.9 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5337) DNA_binding_1 PF01035.20 gi|433639257|ref|YP_007285017.1| - 7.4e-06 26.0 0.0 1.7e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain IGPS PF00218.21 gi|433639258|ref|YP_007285018.1| - 1.7e-66 224.0 0.3 2.1e-66 223.7 0.3 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|433639258|ref|YP_007285018.1| - 0.00025 20.6 0.0 0.0089 15.5 0.0 2.2 2 0 0 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 gi|433639258|ref|YP_007285018.1| - 0.00074 18.8 1.1 0.017 14.3 0.1 2.8 1 1 2 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|433639258|ref|YP_007285018.1| - 0.014 14.7 2.5 0.024 13.9 1.3 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|433639258|ref|YP_007285018.1| - 0.14 11.2 1.0 5.5 6.0 0.0 2.7 2 1 0 2 2 2 0 Dihydrouridine synthase (Dus) PALP PF00291.25 gi|433639259|ref|YP_007285019.1| - 1.6e-39 136.1 2.4 2.8e-39 135.3 2.4 1.4 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|433639260|ref|YP_007285020.1| - 3.4e-81 271.9 0.0 4.1e-81 271.6 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|433639260|ref|YP_007285020.1| - 0.0049 16.4 0.0 0.015 14.8 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.17 gi|433639260|ref|YP_007285020.1| - 0.014 14.9 0.1 0.079 12.4 0.1 1.9 2 0 0 2 2 2 0 PcrB family ThiG PF05690.14 gi|433639260|ref|YP_007285020.1| - 0.058 12.7 0.3 0.09 12.1 0.3 1.3 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG DeoC PF01791.9 gi|433639261|ref|YP_007285021.1| - 7.5e-45 153.4 0.1 9.4e-45 153.1 0.1 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase AP_endonuc_2 PF01261.24 gi|433639261|ref|YP_007285021.1| - 0.00025 20.5 0.4 0.0008 18.9 0.2 1.9 2 1 0 2 2 2 1 Xylose isomerase-like TIM barrel PucR PF07905.11 gi|433639261|ref|YP_007285021.1| - 0.022 15.0 0.2 0.27 11.5 0.0 2.4 2 1 0 2 2 2 0 Purine catabolism regulatory protein-like family NUP PF06516.11 gi|433639262|ref|YP_007285022.1| - 3e-54 184.4 0.0 3.7e-54 184.1 0.0 1.0 1 0 0 1 1 1 1 Purine nucleoside permease (NUP) PNP_UDP_1 PF01048.20 gi|433639262|ref|YP_007285022.1| - 1.7e-13 50.4 0.2 2.1e-13 50.1 0.2 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily SprT-like PF10263.9 gi|433639263|ref|YP_007285023.1| - 6.1e-13 48.6 0.0 1e-12 47.9 0.0 1.4 1 1 0 1 1 1 1 SprT-like family DUF4157 PF13699.6 gi|433639263|ref|YP_007285023.1| - 0.0011 19.1 0.5 0.0068 16.6 0.3 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4157) DUF1059 PF06348.11 gi|433639263|ref|YP_007285023.1| - 0.061 13.6 1.0 0.13 12.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1059) Zn_ribbon_SprT PF17283.2 gi|433639263|ref|YP_007285023.1| - 0.13 12.2 4.1 0.28 11.1 4.1 1.6 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Peptidase_M76 PF09768.9 gi|433639263|ref|YP_007285023.1| - 0.18 11.5 4.5 0.11 12.2 0.9 2.2 2 1 0 2 2 2 0 Peptidase M76 family Peptidase_M1 PF01433.20 gi|433639263|ref|YP_007285023.1| - 0.2 11.2 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M1 domain HAD_2 PF13419.6 gi|433639265|ref|YP_007285025.1| - 7.3e-20 71.8 0.0 1.1e-19 71.3 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433639265|ref|YP_007285025.1| - 6.8e-13 49.4 1.0 1e-11 45.6 1.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433639265|ref|YP_007285025.1| - 1.4e-11 44.3 0.1 3.5e-11 43.0 0.1 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|433639265|ref|YP_007285025.1| - 3e-07 31.0 0.3 4.2e-07 30.6 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DHQS PF01959.16 gi|433639266|ref|YP_007285026.1| - 1.9e-138 461.2 0.2 2.1e-138 461.0 0.2 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II TNT PF14021.6 gi|433639266|ref|YP_007285026.1| - 0.0029 18.1 0.0 0.0068 16.9 0.0 1.6 1 0 0 1 1 1 1 Tuberculosis necrotizing toxin Hint_2 PF13403.6 gi|433639266|ref|YP_007285026.1| - 0.003 17.9 0.3 0.62 10.4 0.0 2.8 2 0 0 2 2 2 1 Hint domain Hint PF01079.20 gi|433639266|ref|YP_007285026.1| - 0.0092 15.5 0.1 0.032 13.7 0.0 1.8 2 0 0 2 2 2 1 Hint module QRPTase_C PF01729.19 gi|433639266|ref|YP_007285026.1| - 0.011 15.5 0.1 3.5 7.4 0.0 2.3 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain DZR PF12773.7 gi|433639267|ref|YP_007285027.1| - 0.00016 21.6 0.6 0.00025 21.0 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|433639267|ref|YP_007285027.1| - 0.00027 20.2 0.7 0.00044 19.6 0.7 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|433639267|ref|YP_007285027.1| - 0.0087 15.7 0.7 0.015 15.0 0.7 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|433639267|ref|YP_007285027.1| - 0.051 14.3 0.3 0.072 13.9 0.3 1.4 1 1 0 1 1 1 0 zinc-ribbon family RskA PF10099.9 gi|433639267|ref|YP_007285027.1| - 0.055 13.8 0.1 0.082 13.2 0.1 1.4 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Rad50_zn_hook PF04423.14 gi|433639267|ref|YP_007285027.1| - 0.18 11.7 0.2 0.29 11.0 0.2 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif DUF2116 PF09889.9 gi|433639267|ref|YP_007285027.1| - 0.55 10.3 3.6 0.66 10.0 0.5 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Prok-RING_1 PF14446.6 gi|433639267|ref|YP_007285027.1| - 0.62 10.0 3.1 2.1 8.3 0.8 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DHquinase_I PF01487.15 gi|433639268|ref|YP_007285028.1| - 8.2e-45 153.8 0.0 9.7e-45 153.6 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase dCache_3 PF14827.6 gi|433639268|ref|YP_007285028.1| - 0.023 14.3 0.0 0.045 13.4 0.0 1.6 1 1 0 1 1 1 0 Double sensory domain of two-component sensor kinase TFIIB PF00382.19 gi|433639269|ref|YP_007285029.1| - 3.4e-37 126.3 4.1 5.1e-19 68.1 0.0 2.5 3 0 0 3 3 3 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|433639269|ref|YP_007285029.1| - 2.9e-15 55.5 1.5 6e-15 54.5 1.5 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|433639269|ref|YP_007285029.1| - 0.012 15.2 2.8 0.32 10.5 0.0 3.9 4 0 0 4 4 4 0 Sigma-70, region 4 IBR PF01485.21 gi|433639269|ref|YP_007285029.1| - 0.087 13.1 0.4 0.16 12.2 0.4 1.4 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Anti-TRAP PF15777.5 gi|433639269|ref|YP_007285029.1| - 0.098 12.6 0.1 0.18 11.8 0.1 1.4 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein HTH_Tnp_ISL3 PF13542.6 gi|433639269|ref|YP_007285029.1| - 0.11 12.0 1.3 0.3 10.5 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 A2L_zn_ribbon PF08792.10 gi|433639269|ref|YP_007285029.1| - 0.15 11.8 0.6 0.33 10.7 0.7 1.6 1 1 0 1 1 1 0 A2L zinc ribbon domain Auto_anti-p27 PF06677.12 gi|433639269|ref|YP_007285029.1| - 0.26 11.5 1.1 0.45 10.7 1.1 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) LexA_DNA_bind PF01726.16 gi|433639271|ref|YP_007285031.1| - 0.081 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain TetR_C_30 PF17939.1 gi|433639272|ref|YP_007285032.1| - 0.02 15.1 0.4 0.039 14.2 0.4 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Pyr_redox_2 PF07992.14 gi|433639273|ref|YP_007285033.1| - 1.9e-44 152.1 0.8 2.4e-44 151.7 0.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433639273|ref|YP_007285033.1| - 2.1e-08 34.6 0.5 0.00066 20.2 0.1 3.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Rubredoxin_C PF18267.1 gi|433639273|ref|YP_007285033.1| - 1.5e-07 31.2 0.0 1.9e-06 27.7 0.0 2.6 3 0 0 3 3 3 1 Rubredoxin NAD+ reductase C-terminal domain HI0933_like PF03486.14 gi|433639273|ref|YP_007285033.1| - 0.0016 17.2 0.0 0.072 11.8 0.0 2.5 3 0 0 3 3 3 1 HI0933-like protein Reductase_C PF14759.6 gi|433639273|ref|YP_007285033.1| - 0.0024 18.4 0.0 0.0071 16.9 0.0 1.9 1 0 0 1 1 1 1 Reductase C-terminal DAO PF01266.24 gi|433639273|ref|YP_007285033.1| - 0.0052 16.4 0.2 1.2 8.6 0.0 2.9 2 1 1 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433639273|ref|YP_007285033.1| - 0.039 14.2 0.2 0.39 11.0 0.0 2.4 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|433639273|ref|YP_007285033.1| - 0.11 12.4 0.1 5.4 7.0 0.0 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding GAF_2 PF13185.6 gi|433639276|ref|YP_007285036.1| - 3.6e-23 82.4 3.0 1.7e-10 41.3 0.1 2.8 2 0 0 2 2 2 2 GAF domain PAS_4 PF08448.10 gi|433639276|ref|YP_007285036.1| - 1.9e-22 79.6 5.1 1.8e-12 47.5 0.0 3.9 3 1 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|433639276|ref|YP_007285036.1| - 2.7e-18 65.5 0.2 1e-08 35.0 0.1 3.4 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 gi|433639276|ref|YP_007285036.1| - 8.5e-17 61.2 0.0 7e-10 38.9 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|433639276|ref|YP_007285036.1| - 9.8e-17 61.1 0.0 6e-08 32.9 0.0 2.8 2 0 0 2 2 2 2 PAS domain HATPase_c PF02518.26 gi|433639276|ref|YP_007285036.1| - 2.5e-14 53.7 0.0 4.7e-14 52.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|433639276|ref|YP_007285036.1| - 7.5e-12 45.1 0.9 7.5e-12 45.1 0.9 3.7 4 1 0 4 4 4 1 His Kinase A (phospho-acceptor) domain GAF_3 PF13492.6 gi|433639276|ref|YP_007285036.1| - 8.3e-12 45.6 1.4 0.00013 22.3 0.1 2.8 3 0 0 3 3 2 2 GAF domain Response_reg PF00072.24 gi|433639276|ref|YP_007285036.1| - 7.4e-09 35.8 0.0 1.9e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain GAF PF01590.26 gi|433639276|ref|YP_007285036.1| - 3.1e-05 24.6 0.1 0.027 15.1 0.0 2.8 2 0 0 2 2 2 2 GAF domain PAS_7 PF12860.7 gi|433639276|ref|YP_007285036.1| - 0.0097 16.1 0.1 1.7 8.8 0.0 4.0 3 0 0 3 3 3 1 PAS fold HATPase_c_3 PF13589.6 gi|433639276|ref|YP_007285036.1| - 0.045 13.6 0.0 0.15 11.9 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Synaptobrevin PF00957.21 gi|433639276|ref|YP_007285036.1| - 0.18 11.6 0.5 1.1 9.1 0.1 2.3 2 0 0 2 2 2 0 Synaptobrevin CPSase_L_D2 PF02786.17 gi|433639277|ref|YP_007285037.1| - 1.6e-96 321.8 0.3 8.8e-57 192.0 0.0 2.9 2 1 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|433639277|ref|YP_007285037.1| - 3.5e-24 85.5 0.0 9.4e-24 84.1 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATPgrasp_Ter PF15632.6 gi|433639277|ref|YP_007285037.1| - 1.1e-13 51.1 0.0 6e-07 29.3 0.1 2.8 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 gi|433639277|ref|YP_007285037.1| - 1.3e-13 50.9 0.0 8.4e-09 35.2 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|433639277|ref|YP_007285037.1| - 1.8e-11 44.4 0.1 2.4e-07 31.0 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|433639277|ref|YP_007285037.1| - 3.4e-11 43.1 0.1 3.8e-08 33.1 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_5 PF13549.6 gi|433639277|ref|YP_007285037.1| - 0.078 12.4 0.0 0.22 10.9 0.0 1.8 1 0 0 1 1 1 0 ATP-grasp domain DAP10 PF07213.11 gi|433639278|ref|YP_007285038.1| - 0.071 13.1 1.0 0.1 12.6 1.0 1.2 1 0 0 1 1 1 0 DAP10 membrane protein VAPB_antitox PF02697.14 gi|433639279|ref|YP_007285039.1| - 7.1e-10 39.5 0.1 8e-10 39.4 0.1 1.0 1 0 0 1 1 1 1 Putative antitoxin PIN PF01850.21 gi|433639280|ref|YP_007285040.1| - 7.9e-08 32.8 0.0 1e-07 32.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain Pterin_bind PF00809.22 gi|433639281|ref|YP_007285041.1| - 4e-80 269.0 3.7 7.7e-80 268.1 1.2 2.1 2 0 0 2 2 2 1 Pterin binding enzyme Mur_ligase_M PF08245.12 gi|433639281|ref|YP_007285041.1| - 1.2e-08 35.2 0.0 2.3e-06 27.7 0.0 2.4 2 0 0 2 2 2 2 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|433639281|ref|YP_007285041.1| - 3.3e-07 30.5 0.0 1.2e-06 28.6 0.0 2.1 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain CAT_RBD PF03123.15 gi|433639281|ref|YP_007285041.1| - 0.13 12.2 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 CAT RNA binding domain Methyltransf_25 PF13649.6 gi|433639282|ref|YP_007285042.1| - 1.4e-18 67.4 0.3 8.4e-17 61.7 0.3 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433639282|ref|YP_007285042.1| - 5.6e-18 65.4 0.0 2.2e-17 63.5 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433639282|ref|YP_007285042.1| - 7.5e-16 58.4 0.0 9.5e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433639282|ref|YP_007285042.1| - 5.2e-11 42.6 0.0 4.5e-10 39.5 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433639282|ref|YP_007285042.1| - 3.1e-09 37.4 0.0 4.8e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|433639282|ref|YP_007285042.1| - 1.8e-07 30.7 0.0 1.2e-06 28.1 0.0 1.9 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|433639282|ref|YP_007285042.1| - 0.0009 18.6 0.0 0.0021 17.4 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|433639282|ref|YP_007285042.1| - 0.0031 17.4 0.0 1.7 8.4 0.0 2.2 1 1 1 2 2 2 2 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|433639282|ref|YP_007285042.1| - 0.0034 17.4 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|433639282|ref|YP_007285042.1| - 0.0077 15.9 0.0 0.0098 15.6 0.0 1.1 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) MTS PF05175.14 gi|433639282|ref|YP_007285042.1| - 0.01 15.4 0.1 0.015 14.9 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain IL12 PF03039.14 gi|433639282|ref|YP_007285042.1| - 0.028 13.7 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Interleukin-12 alpha subunit Methyltransf_33 PF10017.9 gi|433639282|ref|YP_007285042.1| - 0.036 13.2 0.0 0.059 12.5 0.0 1.3 1 1 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent TehB PF03848.14 gi|433639282|ref|YP_007285042.1| - 0.04 13.3 0.0 0.1 12.0 0.0 1.7 1 1 0 1 1 1 0 Tellurite resistance protein TehB MetW PF07021.12 gi|433639282|ref|YP_007285042.1| - 0.085 12.4 0.1 0.29 10.7 0.1 1.8 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW HTH_20 PF12840.7 gi|433639283|ref|YP_007285043.1| - 0.018 15.1 1.9 0.2 11.8 1.9 2.1 1 1 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 gi|433639283|ref|YP_007285043.1| - 0.43 10.6 0.0 0.43 10.6 0.0 1.7 2 0 0 2 2 2 0 MarR family HTH_10 PF04967.12 gi|433639284|ref|YP_007285044.1| - 8e-13 48.0 0.1 1.7e-12 46.9 0.0 1.6 2 0 0 2 2 2 1 HTH DNA binding domain BAT PF15915.5 gi|433639284|ref|YP_007285044.1| - 4.7e-11 42.8 0.3 7.7e-11 42.1 0.3 1.3 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_AsnC-type PF13404.6 gi|433639284|ref|YP_007285044.1| - 0.0089 15.8 0.1 0.016 15.0 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain UPF0122 PF04297.14 gi|433639284|ref|YP_007285044.1| - 0.016 15.4 0.0 0.03 14.5 0.0 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_24 PF13412.6 gi|433639284|ref|YP_007285044.1| - 0.023 14.3 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433639284|ref|YP_007285044.1| - 0.028 14.3 0.1 0.054 13.4 0.1 1.5 1 0 0 1 1 1 0 MarR family ThrE PF06738.12 gi|433639285|ref|YP_007285045.1| - 8.4 5.7 11.7 3.3 7.0 1.3 2.3 2 0 0 2 2 2 0 Putative threonine/serine exporter Glyco_transf_4 PF13439.6 gi|433639286|ref|YP_007285046.1| - 6.5e-18 65.3 0.2 1.5e-17 64.2 0.2 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|433639286|ref|YP_007285046.1| - 6.1e-15 56.0 7.3 6.5e-15 55.9 2.1 2.7 2 2 0 2 2 2 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|433639286|ref|YP_007285046.1| - 4.8e-13 49.0 0.0 1.2e-12 47.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433639286|ref|YP_007285046.1| - 5.3e-12 46.3 0.0 6.3e-11 42.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|433639286|ref|YP_007285046.1| - 0.00021 21.4 0.0 0.0006 19.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like Peptidase_S9 PF00326.21 gi|433639287|ref|YP_007285047.1| - 5.4e-47 160.0 0.0 7.8e-47 159.5 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|433639287|ref|YP_007285047.1| - 1.1e-14 54.7 0.0 6.1e-10 39.1 0.1 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_1 PF00561.20 gi|433639287|ref|YP_007285047.1| - 3.3e-12 46.6 0.2 4.5e-07 29.8 0.2 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold PD40 PF07676.12 gi|433639287|ref|YP_007285047.1| - 3e-11 43.0 8.5 0.00022 21.0 0.0 5.8 5 0 0 5 5 5 3 WD40-like Beta Propeller Repeat DLH PF01738.18 gi|433639287|ref|YP_007285047.1| - 3.9e-11 42.9 0.0 1.7e-10 40.9 0.0 1.8 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|433639287|ref|YP_007285047.1| - 2.2e-08 33.6 0.1 0.00037 19.8 0.1 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 gi|433639287|ref|YP_007285047.1| - 0.00014 21.8 0.2 0.0044 16.9 0.2 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold DPPIV_N PF00930.21 gi|433639287|ref|YP_007285047.1| - 0.00016 20.6 0.0 0.69 8.6 0.0 3.4 2 1 2 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region AXE1 PF05448.12 gi|433639287|ref|YP_007285047.1| - 0.0025 16.5 0.2 0.077 11.7 0.0 2.2 1 1 1 2 2 2 1 Acetyl xylan esterase (AXE1) BAAT_C PF08840.11 gi|433639287|ref|YP_007285047.1| - 0.0046 16.9 0.0 0.15 12.0 0.0 2.2 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_2 PF02230.16 gi|433639287|ref|YP_007285047.1| - 0.016 15.0 0.0 1.8 8.3 0.0 2.3 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 gi|433639287|ref|YP_007285047.1| - 0.069 13.3 0.0 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 TAP-like protein ABC_tran PF00005.27 gi|433639288|ref|YP_007285048.1| - 3.2e-25 89.2 0.0 6.6e-25 88.2 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|433639288|ref|YP_007285048.1| - 1.2e-11 45.0 0.1 1.2e-07 31.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|433639288|ref|YP_007285048.1| - 0.00033 20.4 0.0 0.00085 19.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.6 gi|433639288|ref|YP_007285048.1| - 0.0024 18.6 0.1 0.0043 17.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|433639288|ref|YP_007285048.1| - 0.019 15.5 0.0 0.037 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433639288|ref|YP_007285048.1| - 0.036 14.0 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|433639288|ref|YP_007285048.1| - 0.042 13.6 0.0 0.087 12.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|433639288|ref|YP_007285048.1| - 0.11 11.9 0.0 12 5.2 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ATP_bind_1 PF03029.17 gi|433639288|ref|YP_007285048.1| - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_7 PF12775.7 gi|433639288|ref|YP_007285048.1| - 0.19 11.2 0.0 0.32 10.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC2_membrane_2 PF12679.7 gi|433639289|ref|YP_007285049.1| - 9.2e-36 123.6 21.3 3.6e-35 121.7 21.3 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433639289|ref|YP_007285049.1| - 7.3e-12 45.6 8.6 7.3e-12 45.6 8.6 2.2 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433639289|ref|YP_007285049.1| - 9.5e-11 41.6 8.9 9.5e-11 41.6 8.9 1.5 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433639289|ref|YP_007285049.1| - 2.4e-10 40.1 15.3 3.1e-10 39.7 15.3 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|433639289|ref|YP_007285049.1| - 0.00028 20.3 15.5 0.00094 18.7 15.5 1.7 1 1 0 1 1 1 1 ABC-2 type transporter DUF3165 PF11364.8 gi|433639289|ref|YP_007285049.1| - 0.0053 17.1 5.4 0.0053 17.1 5.4 3.0 2 2 2 4 4 4 1 Protein of unknown function (DUF3165) Nterm_IS4 PF13006.7 gi|433639289|ref|YP_007285049.1| - 0.024 14.8 1.7 0.026 14.7 0.1 1.9 2 0 0 2 2 2 0 Insertion element 4 transposase N-terminal Fe-ADH_2 PF13685.6 gi|433639290|ref|YP_007285050.1| - 7.4e-62 209.3 2.4 8.9e-62 209.0 2.4 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|433639290|ref|YP_007285050.1| - 3.8e-19 68.7 7.0 1.7e-18 66.6 7.0 1.8 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|433639290|ref|YP_007285050.1| - 3.2e-08 33.1 0.1 1.2e-07 31.2 0.1 1.8 1 1 0 1 1 1 1 3-dehydroquinate synthase SBP_bac_5 PF00496.22 gi|433639291|ref|YP_007285051.1| - 2.5e-71 240.7 0.1 3.1e-71 240.3 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 gi|433639291|ref|YP_007285051.1| - 0.00032 20.4 0.3 0.00053 19.7 0.3 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Fucose_iso_N1 PF07881.12 gi|433639291|ref|YP_007285051.1| - 0.055 13.3 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain MaAIMP_sms PF16951.5 gi|433639291|ref|YP_007285051.1| - 0.096 12.4 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 Putative methionine and alanine importer, small subunit BPD_transp_1 PF00528.22 gi|433639292|ref|YP_007285052.1| - 5.5e-46 156.6 10.6 5.5e-46 156.6 10.6 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 gi|433639292|ref|YP_007285052.1| - 0.12 12.9 1.2 0.35 11.5 0.3 2.2 2 0 0 2 2 2 0 Renin receptor-like protein BPD_transp_1 PF00528.22 gi|433639293|ref|YP_007285053.1| - 1.5e-33 116.1 3.7 1.5e-33 116.1 3.7 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|433639293|ref|YP_007285053.1| - 2.5e-12 46.5 0.0 2.5e-12 46.5 0.0 2.9 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|433639294|ref|YP_007285054.1| - 1.5e-30 106.5 0.0 2.2e-30 106.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433639294|ref|YP_007285054.1| - 6.6e-20 71.4 0.4 1.3e-19 70.5 0.4 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433639294|ref|YP_007285054.1| - 5.8e-06 26.3 2.0 3.7e-05 23.7 0.2 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433639294|ref|YP_007285054.1| - 0.0025 17.3 0.1 0.3 10.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|433639294|ref|YP_007285054.1| - 0.0039 17.5 0.7 0.066 13.5 0.7 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433639294|ref|YP_007285054.1| - 0.012 16.0 0.2 0.026 14.9 0.2 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|433639294|ref|YP_007285054.1| - 0.029 14.1 0.0 0.054 13.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.17 gi|433639294|ref|YP_007285054.1| - 0.048 13.8 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain Sigma54_activat PF00158.26 gi|433639294|ref|YP_007285054.1| - 0.12 12.0 0.2 0.47 10.1 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain NB-ARC PF00931.22 gi|433639294|ref|YP_007285054.1| - 0.15 11.3 0.0 0.28 10.3 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain ABC_tran PF00005.27 gi|433639295|ref|YP_007285055.1| - 3.2e-34 118.4 0.0 5e-34 117.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433639295|ref|YP_007285055.1| - 9.8e-19 67.6 0.2 2.6e-18 66.3 0.2 1.8 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|433639295|ref|YP_007285055.1| - 0.0012 19.1 0.5 0.0088 16.3 0.5 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433639295|ref|YP_007285055.1| - 0.0019 18.6 0.6 0.0046 17.4 0.3 1.9 1 1 1 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|433639295|ref|YP_007285055.1| - 0.0035 16.8 0.7 0.029 13.8 0.7 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433639295|ref|YP_007285055.1| - 0.0043 16.7 0.2 0.0084 15.8 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|433639295|ref|YP_007285055.1| - 0.014 15.3 0.1 0.026 14.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 gi|433639295|ref|YP_007285055.1| - 0.022 14.6 1.9 0.6 9.9 0.3 2.1 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF3987 PF13148.6 gi|433639295|ref|YP_007285055.1| - 0.026 13.6 0.1 0.5 9.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) Zeta_toxin PF06414.12 gi|433639295|ref|YP_007285055.1| - 0.087 12.1 0.1 0.16 11.3 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin MMR_HSR1 PF01926.23 gi|433639295|ref|YP_007285055.1| - 0.1 12.7 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase Spp-24 PF07448.11 gi|433639295|ref|YP_007285055.1| - 0.12 12.6 0.5 0.28 11.4 0.5 1.6 1 0 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain ABC_ATPase PF09818.9 gi|433639295|ref|YP_007285055.1| - 0.31 9.8 0.9 1.5 7.6 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Peptidase_M28 PF04389.17 gi|433639297|ref|YP_007285057.1| - 5.4e-32 111.1 0.0 7.5e-32 110.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 PA PF02225.22 gi|433639297|ref|YP_007285057.1| - 1.7e-12 47.2 0.1 3.6e-12 46.1 0.1 1.5 1 0 0 1 1 1 1 PA domain Peptidase_M42 PF05343.14 gi|433639297|ref|YP_007285057.1| - 2.7e-05 23.3 0.0 6.9e-05 22.0 0.0 1.6 1 1 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|433639297|ref|YP_007285057.1| - 0.00026 20.7 0.4 0.00083 19.1 0.4 1.7 1 1 1 2 2 2 1 Peptidase family M20/M25/M40 MFS_1 PF07690.16 gi|433639298|ref|YP_007285058.1| - 2.9e-13 49.5 39.1 2.4e-10 39.9 29.5 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433639298|ref|YP_007285058.1| - 2.7e-05 23.2 0.0 0.00015 20.7 0.0 2.1 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|433639298|ref|YP_007285058.1| - 0.0011 17.9 1.6 0.0011 17.9 1.6 2.8 3 0 0 3 3 3 1 Sugar (and other) transporter DuoxA PF10204.9 gi|433639298|ref|YP_007285058.1| - 0.55 9.2 6.5 0.11 11.4 1.4 2.3 2 1 0 2 2 2 0 Dual oxidase maturation factor Adeno_E4_34 PF04528.13 gi|433639298|ref|YP_007285058.1| - 0.84 9.5 3.2 4.3 7.2 1.2 2.2 2 0 0 2 2 2 0 Adenovirus early E4 34 kDa protein conserved region YwiC PF14256.6 gi|433639298|ref|YP_007285058.1| - 1.8 8.9 20.1 0.6 10.4 4.9 3.7 3 1 0 3 3 3 0 YwiC-like protein Methyltransf_11 PF08241.12 gi|433639299|ref|YP_007285059.1| - 7.3e-18 65.0 0.3 3.2e-17 63.0 0.3 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433639299|ref|YP_007285059.1| - 4.9e-15 56.0 0.3 8.6e-14 52.0 0.3 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433639299|ref|YP_007285059.1| - 1.4e-12 47.6 0.0 6.4e-12 45.5 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433639299|ref|YP_007285059.1| - 2e-09 38.1 0.0 3.2e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433639299|ref|YP_007285059.1| - 9.5e-09 35.3 0.0 1.3e-08 34.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433639299|ref|YP_007285059.1| - 6.4e-07 28.9 0.0 8.4e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|433639299|ref|YP_007285059.1| - 0.0015 18.2 0.0 0.33 10.5 0.0 2.1 2 0 0 2 2 2 2 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|433639299|ref|YP_007285059.1| - 0.056 13.3 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase Pribosyltran PF00156.27 gi|433639300|ref|YP_007285060.1| - 9.7e-28 96.7 0.2 1.4e-27 96.2 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|433639300|ref|YP_007285060.1| - 0.0045 16.5 0.0 0.0089 15.5 0.0 1.5 2 0 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|433639300|ref|YP_007285060.1| - 0.0053 16.2 0.0 0.0073 15.8 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase HD_4 PF13328.6 gi|433639301|ref|YP_007285061.1| - 1.4e-09 37.9 0.0 1.9e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 HD domain HD PF01966.22 gi|433639301|ref|YP_007285061.1| - 0.0039 17.4 0.8 0.012 15.8 0.6 1.9 1 1 0 1 1 1 1 HD domain ELFV_dehydrog PF00208.21 gi|433639302|ref|YP_007285062.1| - 4.3e-67 226.4 0.0 6.1e-67 225.9 0.0 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|433639302|ref|YP_007285062.1| - 7.4e-56 187.6 0.0 1.4e-55 186.7 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|433639302|ref|YP_007285062.1| - 0.0011 18.4 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 gi|433639302|ref|YP_007285062.1| - 0.012 16.0 0.0 0.033 14.5 0.0 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|433639302|ref|YP_007285062.1| - 0.062 13.4 0.1 0.12 12.5 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Zip PF02535.22 gi|433639304|ref|YP_007285064.1| - 0.8 8.9 10.8 0.027 13.7 0.8 2.7 1 1 1 2 2 2 0 ZIP Zinc transporter DUF2842 PF11003.8 gi|433639305|ref|YP_007285065.1| - 0.32 11.3 10.3 0.77 10.1 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) DUF3094 PF11293.8 gi|433639305|ref|YP_007285065.1| - 0.59 9.9 2.0 0.95 9.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) DUF1189 PF06691.11 gi|433639305|ref|YP_007285065.1| - 3.7 7.0 4.3 5.8 6.4 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) Penicil_amidase PF01804.18 gi|433639306|ref|YP_007285066.1| - 2.7e-188 628.1 6.3 3.5e-188 627.8 6.3 1.0 1 0 0 1 1 1 1 Penicillin amidase eIF-5_eIF-2B PF01873.17 gi|433639307|ref|YP_007285067.1| - 3.5e-33 113.9 0.0 5.1e-33 113.4 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|433639307|ref|YP_007285067.1| - 4.8e-09 36.1 0.9 7.6e-09 35.4 0.9 1.4 1 0 0 1 1 1 1 TRAM domain Nudix_N_2 PF14803.6 gi|433639307|ref|YP_007285067.1| - 0.053 13.4 1.6 0.11 12.4 1.6 1.5 1 0 0 1 1 1 0 Nudix N-terminal Stc1 PF12898.7 gi|433639307|ref|YP_007285067.1| - 0.097 13.2 0.1 0.16 12.5 0.1 1.3 1 0 0 1 1 1 0 Stc1 domain Zn-ribbon_8 PF09723.10 gi|433639307|ref|YP_007285067.1| - 0.13 12.4 0.6 0.3 11.2 0.6 1.7 1 1 0 1 1 1 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|433639307|ref|YP_007285067.1| - 0.13 12.7 0.1 1.8 9.0 0.2 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 gi|433639307|ref|YP_007285067.1| - 0.16 11.5 0.4 5.3 6.6 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Citrate_synt PF00285.21 gi|433639308|ref|YP_007285068.1| - 1e-100 337.3 0.0 1.2e-100 337.1 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Peptidase_M24 PF00557.24 gi|433639309|ref|YP_007285069.1| - 7.4e-41 140.1 0.9 9.5e-41 139.8 0.9 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|433639309|ref|YP_007285069.1| - 5.8e-11 43.2 0.0 1.6e-10 41.8 0.0 1.8 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Hydrolase PF00702.26 gi|433639310|ref|YP_007285070.1| - 2e-07 31.5 0.4 4.9e-07 30.3 0.4 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|433639310|ref|YP_007285070.1| - 2.4e-05 24.5 0.0 3e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433639310|ref|YP_007285070.1| - 0.0018 18.3 0.3 0.0099 15.9 0.0 2.1 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|433639310|ref|YP_007285070.1| - 0.099 12.8 0.0 0.97 9.6 0.0 2.3 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase CobD_Cbib PF03186.13 gi|433639311|ref|YP_007285071.1| - 2.5e-77 259.8 3.9 2.5e-77 259.8 3.9 1.4 1 1 1 2 2 2 1 CobD/Cbib protein CobS PF02654.15 gi|433639312|ref|YP_007285072.1| - 2.1e-35 122.8 20.6 2.5e-35 122.5 20.6 1.1 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase NTP_transf_3 PF12804.7 gi|433639313|ref|YP_007285073.1| - 2.1e-15 57.4 1.7 2.8e-15 57.0 1.7 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|433639313|ref|YP_007285073.1| - 0.014 15.0 0.0 0.017 14.7 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase CTP_transf_3 PF02348.19 gi|433639313|ref|YP_007285073.1| - 0.16 11.8 0.0 0.3 11.0 0.0 1.4 1 1 0 1 1 1 0 Cytidylyltransferase Aminotran_1_2 PF00155.21 gi|433639315|ref|YP_007285075.1| - 1.4e-38 133.0 0.0 1.9e-38 132.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|433639315|ref|YP_007285075.1| - 0.0014 18.0 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family CbiZ PF01955.18 gi|433639316|ref|YP_007285076.1| - 3.3e-39 135.0 8.5 4.1e-39 134.7 8.5 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase Acetyltransf_3 PF13302.7 gi|433639318|ref|YP_007285078.1| - 1.4e-30 106.7 0.0 1.8e-30 106.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433639318|ref|YP_007285078.1| - 1.6e-12 47.7 0.0 2e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.6 gi|433639318|ref|YP_007285078.1| - 1.7e-07 31.0 0.0 8.2e-07 28.8 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|433639318|ref|YP_007285078.1| - 0.00014 22.0 0.0 0.00028 21.0 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433639318|ref|YP_007285078.1| - 0.0066 16.9 0.0 0.0093 16.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|433639318|ref|YP_007285078.1| - 0.013 15.1 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_10 PF13673.7 gi|433639318|ref|YP_007285078.1| - 0.034 14.1 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CX PF01705.19 gi|433639318|ref|YP_007285078.1| - 0.11 13.0 0.0 18 6.0 0.0 2.3 1 1 1 2 2 2 0 CX module CxxCxxCC PF03692.15 gi|433639319|ref|YP_007285079.1| - 8.6e-05 23.2 1.3 0.00013 22.6 1.3 1.3 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain PADR1 PF08063.12 gi|433639320|ref|YP_007285080.1| - 0.026 14.3 0.5 0.054 13.3 0.0 1.7 2 0 0 2 2 2 0 PADR1 (NUC008) domain Rubredoxin_2 PF18073.1 gi|433639320|ref|YP_007285080.1| - 0.04 13.6 1.9 2 8.2 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain HypA PF01155.19 gi|433639320|ref|YP_007285080.1| - 0.044 13.8 0.1 0.05 13.6 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RanBP PF00641.18 gi|433639320|ref|YP_007285080.1| - 0.22 10.8 6.1 0.26 10.6 0.2 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others TF_Zn_Ribbon PF08271.12 gi|433639320|ref|YP_007285080.1| - 0.25 10.9 2.9 0.52 9.9 0.3 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding SelR PF01641.18 gi|433639321|ref|YP_007285081.1| - 1.1e-51 174.0 0.1 1.2e-51 173.8 0.1 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 gi|433639321|ref|YP_007285081.1| - 0.0036 17.5 0.0 0.0065 16.7 0.0 1.4 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly HECT_2 PF09814.9 gi|433639321|ref|YP_007285081.1| - 0.0049 15.8 0.0 0.66 8.8 0.0 2.0 1 1 1 2 2 2 2 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NinF PF05810.12 gi|433639321|ref|YP_007285081.1| - 0.14 12.0 0.1 11 5.9 0.0 2.5 2 0 0 2 2 2 0 NinF protein Prim_Zn_Ribbon PF08273.12 gi|433639321|ref|YP_007285081.1| - 0.14 12.5 5.1 5.9 7.3 0.6 2.3 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase TF_Zn_Ribbon PF08271.12 gi|433639321|ref|YP_007285081.1| - 0.15 11.6 3.5 6.9 6.3 0.1 2.9 2 0 0 2 2 2 0 TFIIB zinc-binding LPD14 PF18827.1 gi|433639323|ref|YP_007285083.1| - 0.0012 19.1 0.0 0.45 10.8 0.0 2.3 2 0 0 2 2 2 2 Large polyvalent protein-associated domain 14 Gly-zipper_YMGG PF13441.6 gi|433639323|ref|YP_007285083.1| - 4.8 7.0 14.6 0.98 9.2 4.8 2.3 2 0 0 2 2 2 0 YMGG-like Gly-zipper SDA1 PF05285.12 gi|433639324|ref|YP_007285084.1| - 0.0024 17.3 18.9 0.0025 17.3 18.9 1.0 1 0 0 1 1 1 1 SDA1 Nop14 PF04147.12 gi|433639324|ref|YP_007285084.1| - 0.061 11.5 17.8 0.061 11.5 17.8 1.0 1 0 0 1 1 1 0 Nop14-like family SAPS PF04499.15 gi|433639324|ref|YP_007285084.1| - 0.29 9.9 5.9 0.26 10.0 5.9 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2076 PF09849.9 gi|433639324|ref|YP_007285084.1| - 0.54 10.3 15.3 0.66 10.0 15.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Menin PF05053.13 gi|433639324|ref|YP_007285084.1| - 1.6 7.0 6.1 1.8 6.8 6.1 1.0 1 0 0 1 1 1 0 Menin Lactamase_B PF00753.27 gi|433639326|ref|YP_007285086.1| - 8e-09 35.8 14.6 3.5e-08 33.7 11.7 2.8 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433639326|ref|YP_007285086.1| - 1.1e-06 28.3 1.6 1.8e-06 27.6 1.6 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF3006 PF11213.8 gi|433639327|ref|YP_007285087.1| - 1.5e-16 60.4 0.9 1.7e-16 60.2 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) RNA_pol_Rpb5_C PF01191.19 gi|433639327|ref|YP_007285087.1| - 0.089 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb5, C-terminal domain eIF-5a PF01287.20 gi|433639327|ref|YP_007285087.1| - 0.18 11.9 2.9 0.16 12.1 1.0 1.8 1 1 1 2 2 2 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF2270 PF10028.9 gi|433639328|ref|YP_007285088.1| - 5.9e-74 247.6 4.5 6.9e-74 247.4 4.5 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2270) BaxI_1 PF12811.7 gi|433639328|ref|YP_007285088.1| - 0.0025 17.4 3.2 0.42 10.1 1.5 2.1 2 0 0 2 2 2 2 Bax inhibitor 1 like DUF3054 PF11255.8 gi|433639328|ref|YP_007285088.1| - 0.039 14.5 5.3 0.11 13.1 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3054) SPC12 PF06645.13 gi|433639328|ref|YP_007285088.1| - 0.067 13.3 0.5 1.7 8.8 0.0 2.4 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF4231 PF14015.6 gi|433639328|ref|YP_007285088.1| - 0.094 13.2 2.3 1.1 9.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF1331 PF07048.11 gi|433639328|ref|YP_007285088.1| - 0.62 9.8 3.1 1.7 8.4 3.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1331) DUF2975 PF11188.8 gi|433639328|ref|YP_007285088.1| - 1.2 9.0 9.2 0.42 10.5 2.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) FA_desaturase PF00487.24 gi|433639328|ref|YP_007285088.1| - 4 7.2 6.5 13 5.5 1.0 2.3 1 1 1 2 2 2 0 Fatty acid desaturase HTH_20 PF12840.7 gi|433639329|ref|YP_007285089.1| - 0.037 14.1 3.2 0.044 13.8 1.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix domain MMR_HSR1_C PF08438.10 gi|433639329|ref|YP_007285089.1| - 0.048 14.2 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 GTPase of unknown function C-terminal HTH_10 PF04967.12 gi|433639330|ref|YP_007285090.1| - 3e-16 59.0 0.1 8e-16 57.6 0.1 1.8 2 0 0 2 2 2 1 HTH DNA binding domain BAT PF15915.5 gi|433639330|ref|YP_007285090.1| - 3e-14 53.2 0.3 4.7e-14 52.6 0.3 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_1 PF00126.27 gi|433639330|ref|YP_007285090.1| - 0.0013 18.6 0.1 0.0041 17.0 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_AraC PF00165.23 gi|433639330|ref|YP_007285090.1| - 0.002 18.2 0.1 0.08 13.1 0.0 3.0 3 0 0 3 3 3 1 Bacterial regulatory helix-turn-helix proteins, AraC family Sigma70_r4 PF04545.16 gi|433639330|ref|YP_007285090.1| - 0.0068 15.9 0.0 0.023 14.2 0.0 1.9 1 1 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433639330|ref|YP_007285090.1| - 0.013 15.4 0.0 0.028 14.3 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_8 PF02954.19 gi|433639330|ref|YP_007285090.1| - 0.058 13.2 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_30 PF13556.6 gi|433639330|ref|YP_007285090.1| - 0.1 12.4 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Ydc2-catalyt PF09159.10 gi|433639330|ref|YP_007285090.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 Ribosomal_L15e PF00827.17 gi|433639331|ref|YP_007285091.1| - 5.2e-81 270.9 5.5 5.8e-81 270.8 5.5 1.0 1 0 0 1 1 1 1 Ribosomal L15 Pentapeptide_2 PF01469.18 gi|433639331|ref|YP_007285091.1| - 0.2 11.6 0.6 0.62 10.0 0.5 1.7 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) DUF1440 PF07274.12 gi|433639332|ref|YP_007285092.1| - 0.0049 17.2 1.3 0.0049 17.2 1.3 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF1440) DUF1761 PF08570.10 gi|433639332|ref|YP_007285092.1| - 0.61 10.4 0.1 0.61 10.4 0.1 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1761) RIO1 PF01163.22 gi|433639333|ref|YP_007285093.1| - 2.1e-47 161.2 0.0 2.8e-47 160.8 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|433639333|ref|YP_007285093.1| - 1e-26 93.0 0.0 2.3e-26 91.8 0.0 1.7 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 gi|433639333|ref|YP_007285093.1| - 8.4e-05 22.6 1.1 0.06 13.2 0.0 2.8 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|433639333|ref|YP_007285093.1| - 0.015 14.6 0.0 0.026 13.9 0.0 1.3 1 1 0 1 1 1 0 Protein kinase domain BPL_LplA_LipB PF03099.19 gi|433639334|ref|YP_007285094.1| - 1e-08 35.2 0.0 1.5e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family AP_endonuc_2 PF01261.24 gi|433639335|ref|YP_007285095.1| - 6.4e-28 97.6 0.4 1.3e-27 96.6 0.2 1.6 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel Methyltransf_11 PF08241.12 gi|433639336|ref|YP_007285096.1| - 3.4e-16 59.7 0.1 9.9e-16 58.2 0.1 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433639336|ref|YP_007285096.1| - 1.2e-15 58.0 0.2 3.9e-15 56.3 0.1 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433639336|ref|YP_007285096.1| - 2.9e-15 56.4 0.0 4.7e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433639336|ref|YP_007285096.1| - 5.1e-10 39.4 0.0 7.9e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433639336|ref|YP_007285096.1| - 1.5e-08 35.3 0.0 3.5e-08 34.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|433639336|ref|YP_007285096.1| - 3e-07 30.2 0.0 4.7e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.18 gi|433639336|ref|YP_007285096.1| - 4.4e-07 29.5 0.0 7.5e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|433639336|ref|YP_007285096.1| - 0.00098 18.7 0.1 0.0018 17.8 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|433639336|ref|YP_007285096.1| - 0.0034 17.2 0.0 0.0053 16.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 gi|433639336|ref|YP_007285096.1| - 0.0037 17.3 0.0 0.0061 16.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|433639336|ref|YP_007285096.1| - 0.0098 16.0 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_8 PF05148.15 gi|433639336|ref|YP_007285096.1| - 0.074 12.9 0.3 0.12 12.2 0.3 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase CMAS PF02353.20 gi|433639336|ref|YP_007285096.1| - 0.08 12.2 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Peptidase_M29 PF02073.15 gi|433639337|ref|YP_007285097.1| - 8e-66 222.5 0.0 9.4e-66 222.2 0.0 1.0 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) Abhydrolase_6 PF12697.7 gi|433639339|ref|YP_007285099.1| - 4.9e-05 24.0 9.2 6.4e-05 23.7 9.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 gi|433639339|ref|YP_007285099.1| - 0.03 14.1 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family ATP_bind_3 PF01171.20 gi|433639340|ref|YP_007285100.1| - 2.6e-11 43.6 0.0 3.6e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|433639340|ref|YP_007285100.1| - 2.2e-05 24.6 0.0 3.2e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|433639340|ref|YP_007285100.1| - 0.0018 17.5 0.0 0.0034 16.6 0.0 1.4 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|433639340|ref|YP_007285100.1| - 0.016 14.0 0.0 0.024 13.4 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase DUF3772 PF12607.8 gi|433639340|ref|YP_007285100.1| - 0.019 14.7 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Lar_restr_allev PF14354.6 gi|433639340|ref|YP_007285100.1| - 0.024 15.0 3.8 7.9 6.9 0.1 3.4 3 0 0 3 3 3 0 Restriction alleviation protein Lar DZR PF12773.7 gi|433639340|ref|YP_007285100.1| - 0.061 13.4 5.8 0.22 11.6 0.3 3.2 3 0 0 3 3 3 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|433639340|ref|YP_007285100.1| - 3.9 7.0 10.9 14 5.2 1.8 3.6 3 0 0 3 3 3 0 zinc-ribbon domain SNARE_assoc PF09335.11 gi|433639341|ref|YP_007285101.1| - 3.2e-09 37.3 4.1 9.6e-09 35.8 4.1 1.9 1 1 0 1 1 1 1 SNARE associated Golgi protein DUF1028 PF06267.12 gi|433639341|ref|YP_007285101.1| - 0.38 10.5 0.1 0.38 10.5 0.1 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF1028) Tubulin PF00091.25 gi|433639342|ref|YP_007285102.1| - 1.5e-37 129.8 3.1 4.1e-37 128.3 3.1 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|433639342|ref|YP_007285102.1| - 9.3e-36 122.0 4.8 1.3e-35 121.6 0.7 2.9 2 1 1 3 3 3 1 FtsZ family, C-terminal domain ZT_dimer PF16916.5 gi|433639342|ref|YP_007285102.1| - 0.041 14.0 0.0 0.12 12.5 0.0 1.8 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter Csm1_B PF18211.1 gi|433639342|ref|YP_007285102.1| - 0.081 12.8 0.0 0.34 10.8 0.0 2.0 2 0 0 2 2 2 0 Csm1 subunit domain B RHH_1 PF01402.21 gi|433639343|ref|YP_007285103.1| - 5.2e-08 32.5 0.1 6.6e-08 32.2 0.1 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|433639343|ref|YP_007285103.1| - 6e-05 23.2 0.0 6.1e-05 23.2 0.0 1.0 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family zinc_ribbon_2 PF13240.6 gi|433639344|ref|YP_007285104.1| - 3.4e-08 33.0 8.5 0.001 18.7 1.4 2.6 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|433639344|ref|YP_007285104.1| - 6.2e-08 32.5 10.7 9.8e-08 31.9 10.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|433639344|ref|YP_007285104.1| - 7.2e-08 31.6 11.4 0.0009 18.6 1.1 3.2 1 1 2 3 3 3 3 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|433639344|ref|YP_007285104.1| - 5.1e-07 30.4 6.5 0.00033 21.4 0.4 2.2 2 0 0 2 2 2 2 zinc-ribbon family PolC_DP2 PF03833.13 gi|433639344|ref|YP_007285104.1| - 0.0062 14.5 1.0 0.0063 14.4 1.0 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 RHH_1 PF01402.21 gi|433639344|ref|YP_007285104.1| - 0.016 15.1 0.1 0.016 15.1 0.1 3.2 4 0 0 4 4 3 0 Ribbon-helix-helix protein, copG family DUF2321 PF10083.9 gi|433639344|ref|YP_007285104.1| - 0.018 14.7 2.8 0.059 13.0 2.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) Nudix_N_2 PF14803.6 gi|433639344|ref|YP_007285104.1| - 0.029 14.3 13.5 3.8 7.5 1.3 4.1 3 1 1 4 4 4 0 Nudix N-terminal zinc-ribbons_6 PF07191.12 gi|433639344|ref|YP_007285104.1| - 0.067 13.2 9.4 0.3 11.1 6.0 2.2 1 1 1 2 2 2 0 zinc-ribbons VapB_antitoxin PF09957.9 gi|433639344|ref|YP_007285104.1| - 0.087 12.8 0.0 0.57 10.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB Cys_rich_KTR PF14205.6 gi|433639344|ref|YP_007285104.1| - 0.17 11.7 1.3 3.9 7.4 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich KTR HypA PF01155.19 gi|433639344|ref|YP_007285104.1| - 0.24 11.4 10.7 0.83 9.7 2.2 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ribosomal_L32p PF01783.23 gi|433639344|ref|YP_007285104.1| - 0.59 10.4 5.8 0.39 11.0 2.6 2.0 1 1 1 2 2 2 0 Ribosomal L32p protein family zf-NADH-PPase PF09297.11 gi|433639344|ref|YP_007285104.1| - 0.64 9.7 13.7 2.1 8.1 0.5 3.5 3 1 0 3 3 2 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|433639344|ref|YP_007285104.1| - 0.72 10.1 10.8 6.6 7.0 4.3 2.5 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-RING_7 PF02591.15 gi|433639344|ref|YP_007285104.1| - 1.2 9.4 12.2 1.5 9.1 0.1 3.6 3 1 1 4 4 3 0 C4-type zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|433639344|ref|YP_007285104.1| - 1.4 9.1 12.7 1.1 9.4 2.4 3.4 1 1 2 3 3 3 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|433639344|ref|YP_007285104.1| - 2 8.4 6.7 30 4.6 0.6 3.5 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit zf-C4_Topoisom PF01396.19 gi|433639344|ref|YP_007285104.1| - 2.1 8.2 6.3 3.8 7.4 0.1 3.2 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger DUF1610 PF07754.11 gi|433639344|ref|YP_007285104.1| - 3.1 7.9 12.1 2.3 8.3 5.6 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1610) TerY_C PF15616.6 gi|433639344|ref|YP_007285104.1| - 3.6 7.7 8.2 1.2 9.3 4.5 1.8 1 1 1 2 2 2 0 TerY-C metal binding domain DNA_ligase_ZBD PF03119.16 gi|433639344|ref|YP_007285104.1| - 3.9 7.6 8.9 26 5.0 0.3 3.8 3 1 1 4 4 4 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ACC PF17848.1 gi|433639344|ref|YP_007285104.1| - 4.1 7.6 6.3 12 6.0 0.1 3.1 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain OrfB_Zn_ribbon PF07282.11 gi|433639344|ref|YP_007285104.1| - 5.2 7.1 9.6 2.3e+02 1.8 9.6 2.7 1 1 0 1 1 1 0 Putative transposase DNA-binding domain UPF0547 PF10571.9 gi|433639344|ref|YP_007285104.1| - 6.4 7.0 12.6 8.6 6.6 2.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF1272 PF06906.11 gi|433639344|ref|YP_007285104.1| - 7.8 6.7 10.7 0.31 11.2 1.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) Sgf11 PF08209.11 gi|433639344|ref|YP_007285104.1| - 8.4 6.1 9.4 2.7 7.6 0.6 2.9 2 1 1 3 3 3 0 Sgf11 (transcriptional regulation protein) zf_UBZ PF18439.1 gi|433639344|ref|YP_007285104.1| - 9.1 6.0 9.6 26 4.5 0.0 3.5 3 1 1 4 4 3 0 Ubiquitin-Binding Zinc Finger HicA_toxin PF07927.12 gi|433639346|ref|YP_007285106.1| - 2.1e-14 53.3 0.0 2.4e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, zinc_ribbon_9 PF14369.6 gi|433639348|ref|YP_007285108.1| - 0.11 12.8 5.1 1.9 8.8 5.1 2.3 1 1 0 1 1 1 0 zinc-ribbon VKG_Carbox PF05090.14 gi|433639349|ref|YP_007285109.1| - 6.8e-16 58.1 4.2 7.9e-16 57.9 4.2 1.1 1 0 0 1 1 1 1 Vitamin K-dependent gamma-carboxylase DEC1 PF15859.5 gi|433639349|ref|YP_007285109.1| - 0.067 13.2 0.2 0.28 11.2 0.0 2.1 2 0 0 2 2 2 0 Deleted in esophageal cancer 1 family HTH_10 PF04967.12 gi|433639350|ref|YP_007285110.1| - 4.9e-15 55.1 0.1 8.3e-15 54.3 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639350|ref|YP_007285110.1| - 6.4e-06 26.1 4.7 8.4e-06 25.7 4.4 1.4 1 1 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433639350|ref|YP_007285110.1| - 0.0006 19.3 0.0 0.0014 18.1 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|433639350|ref|YP_007285110.1| - 0.0083 15.7 0.2 0.014 14.9 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 gi|433639350|ref|YP_007285110.1| - 0.027 14.3 0.3 0.066 13.0 0.3 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain UPF0122 PF04297.14 gi|433639350|ref|YP_007285110.1| - 0.058 13.6 0.0 0.17 12.2 0.0 1.8 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HalOD1 PF18545.1 gi|433639351|ref|YP_007285111.1| - 2.6e-24 85.3 0.1 3.7e-24 84.8 0.1 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 ABC_tran PF00005.27 gi|433639352|ref|YP_007285112.1| - 1e-33 116.8 0.0 1.3e-33 116.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639352|ref|YP_007285112.1| - 1.5e-06 28.2 0.3 0.017 15.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|433639352|ref|YP_007285112.1| - 2.7e-06 27.0 0.4 4.8e-06 26.2 0.4 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433639352|ref|YP_007285112.1| - 2.2e-05 24.9 0.4 3.5e-05 24.2 0.4 1.3 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|433639352|ref|YP_007285112.1| - 4.3e-05 23.1 0.0 0.17 11.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 gi|433639352|ref|YP_007285112.1| - 0.0008 19.3 0.1 0.27 11.1 0.1 2.1 2 0 0 2 2 2 2 NTPase AAA_30 PF13604.6 gi|433639352|ref|YP_007285112.1| - 0.0033 17.2 0.9 0.018 14.8 0.1 2.0 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|433639352|ref|YP_007285112.1| - 0.0079 15.9 0.0 0.79 9.4 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_23 PF13476.6 gi|433639352|ref|YP_007285112.1| - 0.0098 16.4 0.0 0.014 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|433639352|ref|YP_007285112.1| - 0.042 12.8 0.2 0.07 12.1 0.2 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|433639352|ref|YP_007285112.1| - 0.069 12.9 0.2 0.099 12.4 0.2 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 gi|433639352|ref|YP_007285112.1| - 0.1 11.9 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Cytidylate_kin PF02224.18 gi|433639352|ref|YP_007285112.1| - 0.11 12.3 0.2 0.18 11.5 0.2 1.3 1 0 0 1 1 1 0 Cytidylate kinase SbcCD_C PF13558.6 gi|433639352|ref|YP_007285112.1| - 0.13 12.5 0.4 2.9 8.2 0.2 2.6 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 gi|433639352|ref|YP_007285112.1| - 0.13 12.1 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 NACHT domain RsgA_GTPase PF03193.16 gi|433639352|ref|YP_007285112.1| - 0.16 11.8 0.1 0.33 10.8 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 gi|433639352|ref|YP_007285112.1| - 0.2 12.2 0.2 0.44 11.1 0.2 1.5 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|433639352|ref|YP_007285112.1| - 0.22 11.4 0.0 0.33 10.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain ParA PF10609.9 gi|433639352|ref|YP_007285112.1| - 0.36 10.2 2.1 2.1 7.7 0.0 2.0 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase FtsX PF02687.21 gi|433639353|ref|YP_007285113.1| - 2.2e-05 24.9 14.5 0.00011 22.6 7.4 3.2 3 0 0 3 3 3 1 FtsX-like permease family ABC2_membrane_3 PF12698.7 gi|433639353|ref|YP_007285113.1| - 1.1 8.3 6.0 0.16 11.1 2.0 1.6 2 0 0 2 2 2 0 ABC-2 family transporter protein MacB_PCD PF12704.7 gi|433639354|ref|YP_007285114.1| - 1.2e-14 55.1 9.6 1.2e-14 55.1 9.6 1.7 2 1 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|433639354|ref|YP_007285114.1| - 0.00011 22.5 3.6 0.00011 22.5 3.6 2.3 3 0 0 3 3 3 1 FtsX-like permease family SbcD_C PF12320.8 gi|433639354|ref|YP_007285114.1| - 0.027 14.8 0.0 0.049 13.9 0.0 1.4 1 0 0 1 1 1 0 Type 5 capsule protein repressor C-terminal domain Phage_holin_2_3 PF16080.5 gi|433639354|ref|YP_007285114.1| - 0.037 13.8 0.2 0.037 13.8 0.2 2.4 2 0 0 2 2 2 0 Bacteriophage holin family HP1 LptF_LptG PF03739.14 gi|433639354|ref|YP_007285114.1| - 0.6 8.9 6.8 0.043 12.7 1.9 1.5 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG tRNA-synt_2c PF01411.19 gi|433639355|ref|YP_007285115.1| - 1.4e-14 53.6 0.0 2e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|433639355|ref|YP_007285115.1| - 7.4e-12 45.2 0.1 1.4e-11 44.3 0.1 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain PRP4 PF08799.11 gi|433639355|ref|YP_007285115.1| - 0.27 10.8 2.3 0.63 9.6 2.3 1.7 1 0 0 1 1 1 0 pre-mRNA processing factor 4 (PRP4) like HalOD1 PF18545.1 gi|433639356|ref|YP_007285116.1| - 5.9e-22 77.7 0.2 6.8e-22 77.5 0.2 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 tRNA-synt_2b PF00587.25 gi|433639357|ref|YP_007285117.1| - 1.3e-20 74.1 0.0 2e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|433639357|ref|YP_007285117.1| - 3e-18 65.7 0.0 5.4e-18 64.9 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|433639357|ref|YP_007285117.1| - 1.7e-17 63.3 0.1 3.8e-17 62.2 0.1 1.5 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal HIT PF01230.23 gi|433639358|ref|YP_007285118.1| - 4.7e-18 65.7 0.0 5.9e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|433639358|ref|YP_007285118.1| - 5.7e-12 46.1 0.0 7.5e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|433639358|ref|YP_007285118.1| - 1.6e-05 24.8 0.0 2.2e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 ADH_zinc_N PF00107.26 gi|433639359|ref|YP_007285119.1| - 1.4e-29 102.7 0.1 2.8e-29 101.7 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|433639359|ref|YP_007285119.1| - 1.1e-23 84.8 0.3 4.4e-23 82.8 0.1 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|433639359|ref|YP_007285119.1| - 9.2e-10 38.4 0.3 3.1e-08 33.5 0.1 2.5 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 gi|433639359|ref|YP_007285119.1| - 0.063 12.7 0.1 0.1 12.1 0.1 1.3 1 0 0 1 1 1 0 short chain dehydrogenase NUDIX PF00293.28 gi|433639360|ref|YP_007285120.1| - 1.6e-17 63.8 0.3 2.1e-17 63.4 0.3 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|433639360|ref|YP_007285120.1| - 0.019 14.9 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 NUDIX domain CBS PF00571.28 gi|433639361|ref|YP_007285121.1| - 6.3e-23 81.0 3.1 1.6e-10 41.3 0.5 2.1 2 0 0 2 2 2 2 CBS domain Lys-AminoMut_A PF09043.11 gi|433639361|ref|YP_007285121.1| - 0.011 14.2 0.0 0.014 13.9 0.0 1.2 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Pyr_redox_2 PF07992.14 gi|433639363|ref|YP_007285123.1| - 4.7e-32 111.4 0.5 5.6e-32 111.1 0.5 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|433639363|ref|YP_007285123.1| - 3.1e-11 43.1 0.0 5.3e-06 25.9 0.0 2.5 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433639363|ref|YP_007285123.1| - 4.1e-08 32.7 4.1 3.7e-06 26.3 0.7 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|433639363|ref|YP_007285123.1| - 1e-06 28.4 2.6 1.7e-06 27.7 2.6 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|433639363|ref|YP_007285123.1| - 9.1e-06 25.0 0.8 1.6e-05 24.2 0.8 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|433639363|ref|YP_007285123.1| - 2.1e-05 25.0 0.7 0.0053 17.3 0.3 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433639363|ref|YP_007285123.1| - 5e-05 22.2 0.2 0.00014 20.7 0.4 1.5 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|433639363|ref|YP_007285123.1| - 0.00012 21.5 0.6 0.00022 20.6 0.6 1.4 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|433639363|ref|YP_007285123.1| - 0.00018 21.2 4.9 0.0016 18.1 4.1 2.6 1 1 1 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433639363|ref|YP_007285123.1| - 0.00021 21.4 0.6 0.00047 20.3 0.6 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|433639363|ref|YP_007285123.1| - 0.00063 19.0 0.0 0.0012 18.1 0.0 1.5 1 0 0 1 1 1 1 Thi4 family K_oxygenase PF13434.6 gi|433639363|ref|YP_007285123.1| - 0.0016 17.7 0.0 0.017 14.2 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|433639363|ref|YP_007285123.1| - 0.0074 15.6 0.2 0.012 14.9 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|433639363|ref|YP_007285123.1| - 0.0077 15.1 1.0 0.078 11.8 0.3 2.2 2 0 0 2 2 2 1 Tryptophan halogenase zf-C2H2_jaz PF12171.8 gi|433639363|ref|YP_007285123.1| - 0.16 12.3 0.3 0.29 11.5 0.3 1.4 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding Lycopene_cycl PF05834.12 gi|433639363|ref|YP_007285123.1| - 0.17 10.9 0.3 0.25 10.4 0.3 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein HalOD1 PF18545.1 gi|433639364|ref|YP_007285124.1| - 6.1e-23 80.9 0.3 8.2e-23 80.5 0.3 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 Gp5_C PF06715.12 gi|433639364|ref|YP_007285124.1| - 0.035 14.3 0.2 0.063 13.4 0.2 1.4 1 0 0 1 1 1 0 Gp5 C-terminal repeat (3 copies) DUF5350 PF17299.2 gi|433639366|ref|YP_007285126.1| - 0.058 13.9 0.4 0.1 13.1 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5350) DUF5476 PF17570.2 gi|433639366|ref|YP_007285126.1| - 0.62 10.5 2.3 8.7 6.8 0.2 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5476) HTH_45 PF14947.6 gi|433639371|ref|YP_007285131.1| - 4.3e-05 23.4 0.0 9.8e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|433639371|ref|YP_007285131.1| - 0.023 14.5 0.0 0.043 13.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|433639371|ref|YP_007285131.1| - 0.1 12.5 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 MarR family Rhomboid PF01694.22 gi|433639372|ref|YP_007285132.1| - 6.5e-25 87.9 13.9 6.5e-25 87.9 13.9 1.9 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 gi|433639372|ref|YP_007285132.1| - 0.0087 16.6 0.2 0.0087 16.6 0.2 2.5 2 1 1 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) Ribosomal_S10 PF00338.22 gi|433639373|ref|YP_007285133.1| - 4.4e-26 91.0 0.0 4.9e-26 90.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.27 gi|433639374|ref|YP_007285134.1| - 2.2e-55 187.2 0.1 3.1e-55 186.7 0.1 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|433639374|ref|YP_007285134.1| - 7.3e-37 126.1 0.0 1.8e-36 124.8 0.0 1.7 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|433639374|ref|YP_007285134.1| - 1.2e-14 54.4 3.3 6.6e-14 52.1 1.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|433639374|ref|YP_007285134.1| - 1.6e-07 31.4 0.1 1.2e-06 28.6 0.1 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|433639374|ref|YP_007285134.1| - 0.0038 17.2 1.1 0.48 10.3 0.1 2.6 1 1 1 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|433639374|ref|YP_007285134.1| - 0.0048 17.0 0.1 1.8 8.6 0.0 2.3 1 1 1 2 2 2 2 Dynamin family Septin PF00735.18 gi|433639374|ref|YP_007285134.1| - 0.018 14.3 0.0 0.042 13.1 0.0 1.5 1 1 0 1 1 1 0 Septin FeoB_N PF02421.18 gi|433639374|ref|YP_007285134.1| - 0.026 14.0 0.1 0.47 10.0 0.2 2.5 2 1 0 2 2 2 0 Ferrous iron transport protein B PduV-EutP PF10662.9 gi|433639374|ref|YP_007285134.1| - 0.027 14.2 0.3 0.4 10.4 0.2 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation GTP_EFTU_D4 PF14578.6 gi|433639374|ref|YP_007285134.1| - 0.035 14.0 0.8 0.1 12.5 0.8 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 SRPRB PF09439.10 gi|433639374|ref|YP_007285134.1| - 0.042 13.3 0.0 1.3 8.4 0.0 2.2 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit NTP_transf_3 PF12804.7 gi|433639374|ref|YP_007285134.1| - 0.049 14.0 0.0 0.076 13.4 0.0 1.4 1 0 0 1 1 1 0 MobA-like NTP transferase domain Ras PF00071.22 gi|433639374|ref|YP_007285134.1| - 0.083 12.5 0.5 0.51 9.9 0.1 2.1 2 0 0 2 2 2 0 Ras family Homoserine_dh PF00742.19 gi|433639375|ref|YP_007285135.1| - 3.9e-48 163.7 0.1 6.6e-48 162.9 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase ELFV_dehydrog PF00208.21 gi|433639375|ref|YP_007285135.1| - 5.4e-06 26.3 3.5 0.00013 21.8 1.4 2.4 1 1 1 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NAD_binding_3 PF03447.16 gi|433639375|ref|YP_007285135.1| - 1.9e-05 25.3 0.6 0.00022 21.9 0.6 2.4 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433639375|ref|YP_007285135.1| - 0.0016 18.7 0.8 0.056 13.7 0.2 2.5 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|433639375|ref|YP_007285135.1| - 0.0072 15.7 0.4 0.016 14.5 0.3 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PglD_N PF17836.1 gi|433639375|ref|YP_007285135.1| - 0.028 15.0 0.1 0.054 14.1 0.1 1.5 1 0 0 1 1 1 0 PglD N-terminal domain 3HCDH_N PF02737.18 gi|433639375|ref|YP_007285135.1| - 0.15 11.9 1.2 0.26 11.1 1.2 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACT PF01842.25 gi|433639376|ref|YP_007285136.1| - 7.4e-08 32.0 0.0 3.2e-07 30.0 0.0 2.1 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|433639376|ref|YP_007285136.1| - 0.079 13.6 0.0 0.26 11.9 0.0 1.8 2 0 0 2 2 2 0 ACT domain NifU PF01106.17 gi|433639377|ref|YP_007285137.1| - 9.9e-09 35.2 0.1 1.4e-08 34.8 0.1 1.2 1 0 0 1 1 1 1 NifU-like domain ROK PF00480.20 gi|433639378|ref|YP_007285138.1| - 3.1e-45 154.9 0.1 3.5e-45 154.7 0.1 1.0 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 gi|433639378|ref|YP_007285138.1| - 0.0016 18.0 0.1 0.0025 17.4 0.1 1.3 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.21 gi|433639378|ref|YP_007285138.1| - 0.013 15.1 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Phage_Coat_B PF05356.11 gi|433639378|ref|YP_007285138.1| - 1.6 8.7 3.9 2 8.4 0.4 2.6 1 1 2 3 3 3 0 Phage Coat protein B PAS PF00989.25 gi|433639379|ref|YP_007285139.1| - 2.3e-14 53.4 0.2 4.4e-10 39.6 0.0 3.0 4 0 0 4 4 4 2 PAS fold PAS_4 PF08448.10 gi|433639379|ref|YP_007285139.1| - 8.7e-13 48.5 5.2 7.7e-09 35.8 0.6 2.9 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.26 gi|433639379|ref|YP_007285139.1| - 5.4e-11 43.0 0.0 1.3e-10 41.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|433639379|ref|YP_007285139.1| - 1.8e-10 40.6 0.0 0.00019 21.4 0.0 3.0 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.7 gi|433639379|ref|YP_007285139.1| - 1.7e-07 31.5 0.0 2e-05 24.8 0.0 2.4 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|433639379|ref|YP_007285139.1| - 1.2e-06 28.5 0.1 6.2e-06 26.2 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HisKA PF00512.25 gi|433639379|ref|YP_007285139.1| - 5.2e-06 26.4 0.2 1.5e-05 25.0 0.1 1.8 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_7 PF12860.7 gi|433639379|ref|YP_007285139.1| - 0.00094 19.3 0.2 1.2 9.3 0.1 3.1 3 1 0 3 3 3 2 PAS fold HATPase_c_3 PF13589.6 gi|433639379|ref|YP_007285139.1| - 0.0093 15.8 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPR_12 PF13424.6 gi|433639380|ref|YP_007285140.1| - 7.6e-20 71.0 66.8 2.2e-07 31.1 7.8 8.1 3 2 7 10 10 10 9 Tetratricopeptide repeat AAA_16 PF13191.6 gi|433639380|ref|YP_007285140.1| - 1.4e-19 71.1 0.3 1.4e-19 71.1 0.3 3.7 2 1 1 3 3 2 1 AAA ATPase domain TPR_MalT PF17874.1 gi|433639380|ref|YP_007285140.1| - 1.6e-14 54.1 34.3 1.6e-12 47.4 7.6 3.7 2 2 1 3 3 3 3 MalT-like TPR region TPR_1 PF00515.28 gi|433639380|ref|YP_007285140.1| - 1.1e-11 44.0 26.6 0.00015 21.4 0.2 9.7 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|433639380|ref|YP_007285140.1| - 2.5e-10 39.6 46.7 0.078 13.1 0.5 11.1 11 0 0 11 11 11 4 Tetratricopeptide repeat AAA_22 PF13401.6 gi|433639380|ref|YP_007285140.1| - 6.8e-08 32.9 0.0 2.2e-07 31.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain DUF2791 PF10923.8 gi|433639380|ref|YP_007285140.1| - 1.4e-05 24.2 0.0 3.1e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) TPR_10 PF13374.6 gi|433639380|ref|YP_007285140.1| - 2.9e-05 23.8 1.6 2.9e-05 23.8 1.6 8.7 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_17 PF13431.6 gi|433639380|ref|YP_007285140.1| - 3.8e-05 23.8 4.0 0.66 10.5 0.1 5.3 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|433639380|ref|YP_007285140.1| - 4.2e-05 23.4 18.9 2.9 8.3 0.1 8.3 9 0 0 9 9 8 1 Tetratricopeptide repeat NTPase_1 PF03266.15 gi|433639380|ref|YP_007285140.1| - 7.1e-05 22.8 0.1 0.00034 20.5 0.0 2.0 2 0 0 2 2 2 1 NTPase PadR PF03551.14 gi|433639380|ref|YP_007285140.1| - 0.00021 21.2 0.0 0.00052 19.9 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family ATPase_2 PF01637.18 gi|433639380|ref|YP_007285140.1| - 0.0024 17.8 0.0 0.0045 16.9 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea TPR_16 PF13432.6 gi|433639380|ref|YP_007285140.1| - 0.0036 17.9 9.4 0.0036 17.9 9.4 9.2 4 2 4 9 9 9 5 Tetratricopeptide repeat TPR_21 PF09976.9 gi|433639380|ref|YP_007285140.1| - 0.0043 16.8 7.5 0.0043 16.8 7.5 4.4 1 1 3 4 4 4 1 Tetratricopeptide repeat-like domain SNAP PF14938.6 gi|433639380|ref|YP_007285140.1| - 0.018 14.5 27.6 0.014 14.9 3.0 4.1 2 1 3 5 5 5 0 Soluble NSF attachment protein, SNAP NACHT PF05729.12 gi|433639380|ref|YP_007285140.1| - 0.019 14.9 0.0 0.052 13.5 0.0 1.7 1 0 0 1 1 1 0 NACHT domain Sel1 PF08238.12 gi|433639380|ref|YP_007285140.1| - 0.068 13.9 1.7 2.9 8.7 0.8 3.5 2 0 0 2 2 2 0 Sel1 repeat AAA_29 PF13555.6 gi|433639380|ref|YP_007285140.1| - 0.072 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|433639380|ref|YP_007285140.1| - 0.082 12.9 0.0 0.22 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain TPR_7 PF13176.6 gi|433639380|ref|YP_007285140.1| - 1.5 9.1 45.0 0.06 13.4 0.6 10.5 11 0 0 11 11 11 0 Tetratricopeptide repeat adh_short_C2 PF13561.6 gi|433639381|ref|YP_007285141.1| - 2e-50 171.5 0.1 6e-50 170.0 0.1 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433639381|ref|YP_007285141.1| - 6e-44 149.9 0.0 7.2e-44 149.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433639381|ref|YP_007285141.1| - 1.5e-10 41.3 0.1 1.8e-10 41.0 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433639381|ref|YP_007285141.1| - 0.0027 17.2 0.1 0.0056 16.2 0.0 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 gi|433639381|ref|YP_007285141.1| - 0.097 12.0 0.1 0.17 11.2 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|433639381|ref|YP_007285141.1| - 0.16 11.3 0.0 0.29 10.4 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1471 PF07338.13 gi|433639381|ref|YP_007285141.1| - 0.67 10.0 6.6 0.64 10.0 1.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1471) DUF4872 PF16169.5 gi|433639382|ref|YP_007285142.1| - 4.9e-37 127.3 0.3 6.4e-37 127.0 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4872) BtrH_N PF14399.6 gi|433639382|ref|YP_007285142.1| - 1.1e-22 80.7 0.1 3.8e-22 79.0 0.1 1.9 1 1 0 1 1 1 1 Butirosin biosynthesis protein H, N-terminal CAP_N PF01213.19 gi|433639382|ref|YP_007285142.1| - 0.054 13.0 0.0 0.075 12.5 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glyoxalase_4 PF13669.6 gi|433639383|ref|YP_007285143.1| - 8.9e-15 54.9 0.1 1.2e-14 54.5 0.1 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 gi|433639383|ref|YP_007285143.1| - 0.00014 22.1 0.2 0.0002 21.6 0.2 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|433639383|ref|YP_007285143.1| - 0.0059 16.7 0.8 0.018 15.1 0.8 1.7 1 1 0 1 1 1 1 Glyoxalase-like domain 4HBT PF03061.22 gi|433639384|ref|YP_007285144.1| - 1.4e-09 38.2 0.5 2.7e-09 37.3 0.3 1.6 2 0 0 2 2 2 1 Thioesterase superfamily DUF4442 PF14539.6 gi|433639384|ref|YP_007285144.1| - 1.4e-05 25.2 0.0 2.1e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) AMP-binding_C_2 PF14535.6 gi|433639385|ref|YP_007285145.1| - 1.2e-18 67.2 0.5 2.2e-18 66.3 0.5 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|433639385|ref|YP_007285145.1| - 2.3e-11 43.0 0.0 4.4e-11 42.0 0.0 1.6 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.12 gi|433639385|ref|YP_007285145.1| - 2.6e-06 26.7 0.0 0.0052 15.9 0.0 2.3 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE GH3 PF03321.13 gi|433639385|ref|YP_007285145.1| - 0.045 12.6 0.0 0.082 11.7 0.0 1.3 1 0 0 1 1 1 0 GH3 auxin-responsive promoter Gag_p10 PF02337.17 gi|433639385|ref|YP_007285145.1| - 0.25 11.3 0.0 0.48 10.4 0.0 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein ABC_tran PF00005.27 gi|433639386|ref|YP_007285146.1| - 3.5e-31 108.5 0.0 4.9e-31 108.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639386|ref|YP_007285146.1| - 4.1e-07 30.1 0.2 0.016 15.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|433639386|ref|YP_007285146.1| - 0.007 16.1 1.0 0.0089 15.8 1.0 1.4 1 1 0 1 1 1 1 AAA domain MukB PF04310.12 gi|433639386|ref|YP_007285146.1| - 0.028 14.2 0.1 0.048 13.5 0.1 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_23 PF13476.6 gi|433639386|ref|YP_007285146.1| - 0.029 14.9 0.1 0.044 14.3 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|433639386|ref|YP_007285146.1| - 0.048 13.4 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|433639386|ref|YP_007285146.1| - 0.054 13.1 0.0 0.21 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|433639386|ref|YP_007285146.1| - 0.065 12.9 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 gi|433639386|ref|YP_007285146.1| - 0.11 12.1 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|433639386|ref|YP_007285146.1| - 0.13 12.7 0.3 0.18 12.2 0.3 1.4 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|433639386|ref|YP_007285146.1| - 0.18 11.0 0.1 0.28 10.3 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|433639386|ref|YP_007285146.1| - 0.18 11.7 0.1 0.59 10.0 0.1 1.8 2 0 0 2 2 2 0 NACHT domain SMC_N PF02463.19 gi|433639386|ref|YP_007285146.1| - 0.2 11.1 0.1 1.6 8.1 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF3584 PF12128.8 gi|433639386|ref|YP_007285146.1| - 0.28 8.7 0.1 0.35 8.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran PF00005.27 gi|433639387|ref|YP_007285147.1| - 2.1e-27 96.3 0.0 2.7e-27 95.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 gi|433639387|ref|YP_007285147.1| - 2.1e-08 33.9 0.6 2.1e-08 33.9 0.6 1.9 2 0 0 2 2 2 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 gi|433639387|ref|YP_007285147.1| - 9.7e-06 25.6 1.6 0.00046 20.1 0.2 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|433639387|ref|YP_007285147.1| - 0.00014 22.5 0.8 0.00021 21.8 0.8 1.6 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|433639387|ref|YP_007285147.1| - 0.00094 18.8 0.0 0.0017 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433639387|ref|YP_007285147.1| - 0.0057 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|433639387|ref|YP_007285147.1| - 0.0073 16.0 0.0 0.01 15.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|433639387|ref|YP_007285147.1| - 0.011 15.6 0.0 0.024 14.5 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase SMC_N PF02463.19 gi|433639387|ref|YP_007285147.1| - 0.025 14.0 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|433639387|ref|YP_007285147.1| - 0.028 14.5 0.2 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|433639387|ref|YP_007285147.1| - 0.047 13.0 0.0 0.08 12.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.6 gi|433639387|ref|YP_007285147.1| - 0.093 13.3 0.0 0.26 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|433639387|ref|YP_007285147.1| - 0.12 12.6 0.0 0.3 11.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|433639387|ref|YP_007285147.1| - 0.19 11.4 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 gi|433639387|ref|YP_007285147.1| - 0.27 9.8 0.0 0.33 9.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain BPD_transp_2 PF02653.16 gi|433639388|ref|YP_007285148.1| - 2.5e-80 269.5 80.4 3.6e-41 141.1 39.1 2.1 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component Coa1 PF08695.10 gi|433639388|ref|YP_007285148.1| - 0.068 12.9 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Peripla_BP_6 PF13458.6 gi|433639389|ref|YP_007285149.1| - 1.5e-62 212.2 8.8 1.9e-62 211.9 8.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 gi|433639389|ref|YP_007285149.1| - 8.3e-25 87.5 1.8 1e-24 87.2 1.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 gi|433639389|ref|YP_007285149.1| - 3.4e-11 42.8 0.1 4.3e-11 42.5 0.1 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region TAT_signal PF10518.9 gi|433639389|ref|YP_007285149.1| - 0.21 11.5 7.1 0.043 13.7 3.1 1.9 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence PAC2 PF09754.9 gi|433639390|ref|YP_007285150.1| - 1.2e-35 123.5 0.4 1.4e-35 123.3 0.4 1.0 1 0 0 1 1 1 1 PAC2 family FlxA PF14282.6 gi|433639390|ref|YP_007285150.1| - 0.01 15.8 5.7 0.01 15.8 5.7 1.8 2 0 0 2 2 2 0 FlxA-like protein Band_7 PF01145.25 gi|433639391|ref|YP_007285151.1| - 1.2e-36 126.4 0.5 2.8e-36 125.2 0.5 1.6 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|433639391|ref|YP_007285151.1| - 0.0086 15.8 0.5 0.018 14.7 0.1 1.9 2 1 0 2 2 2 1 SPFH domain-Band 7 family PQQ_3 PF13570.6 gi|433639392|ref|YP_007285152.1| - 6.4e-77 252.4 55.4 1e-11 44.9 0.5 11.5 9 0 0 9 9 8 8 PQQ-like domain PQQ_2 PF13360.6 gi|433639392|ref|YP_007285152.1| - 5.3e-55 186.6 27.3 2.5e-36 125.5 11.4 5.5 4 1 1 5 5 5 2 PQQ-like domain PQQ PF01011.21 gi|433639392|ref|YP_007285152.1| - 3.6e-49 162.5 31.2 1.8e-10 40.2 0.0 10.6 10 0 0 10 10 9 8 PQQ enzyme repeat CarboxypepD_reg PF13620.6 gi|433639392|ref|YP_007285152.1| - 1.9e-23 82.5 14.5 4.2e-16 59.0 6.7 8.3 8 0 0 8 8 6 2 Carboxypeptidase regulatory-like domain CARDB PF07705.11 gi|433639392|ref|YP_007285152.1| - 2.8e-20 72.5 47.1 7.9e-06 26.1 0.5 9.3 10 1 1 11 11 9 6 CARDB CarbopepD_reg_2 PF13715.6 gi|433639392|ref|YP_007285152.1| - 4.1e-13 49.1 3.7 7.8e-09 35.4 0.6 3.3 2 0 0 2 2 2 2 CarboxypepD_reg-like domain PKD PF00801.20 gi|433639392|ref|YP_007285152.1| - 8.9e-11 41.5 2.3 8.9e-11 41.5 2.3 7.2 8 1 0 8 8 7 2 PKD domain bMG3 PF11974.8 gi|433639392|ref|YP_007285152.1| - 6.4e-09 35.8 7.1 0.00015 21.8 0.7 4.4 3 0 0 3 3 3 2 Bacterial alpha-2-macroglobulin MG3 domain SdrD_B PF17210.3 gi|433639392|ref|YP_007285152.1| - 5.6e-07 29.8 12.1 0.0024 18.1 1.0 5.3 4 0 0 4 4 4 2 SdrD B-like domain 4HBT PF03061.22 gi|433639392|ref|YP_007285152.1| - 0.00082 19.7 3.9 0.28 11.6 0.1 3.9 3 0 0 3 3 3 1 Thioesterase superfamily Glug PF07581.12 gi|433639392|ref|YP_007285152.1| - 0.0055 17.0 0.8 0.0055 17.0 0.8 12.9 13 0 0 13 13 12 2 The GLUG motif Phage_TTP_12 PF16461.5 gi|433639392|ref|YP_007285152.1| - 0.04 13.6 2.0 0.66 9.7 0.1 3.4 2 0 0 2 2 2 0 Lambda phage tail tube protein, TTP DUF4369 PF14289.6 gi|433639392|ref|YP_007285152.1| - 0.1 13.1 0.1 0.9 10.1 0.1 2.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4369) PKD_3 PF16820.5 gi|433639392|ref|YP_007285152.1| - 0.1 12.3 5.3 0.5 10.2 0.2 3.7 4 0 0 4 4 4 0 PKD-like domain DUF4905 PF16248.5 gi|433639392|ref|YP_007285152.1| - 0.12 12.3 0.1 19 5.2 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4905) TTR-52 PF01060.23 gi|433639392|ref|YP_007285152.1| - 0.15 12.8 0.2 4.4 8.1 0.0 2.9 2 0 0 2 2 2 0 Transthyretin-like family DUF4352 PF11611.8 gi|433639392|ref|YP_007285152.1| - 0.29 11.4 13.7 0.58 10.4 0.9 5.7 7 0 0 7 7 7 0 Domain of unknown function (DUF4352) ZirS_C PF16583.5 gi|433639392|ref|YP_007285152.1| - 1.1 8.8 3.7 1.6 8.3 0.4 3.0 2 0 0 2 2 2 0 Zinc-regulated secreted antivirulence protein C-terminal domain ASH PF15780.5 gi|433639392|ref|YP_007285152.1| - 5.5 7.3 5.4 4.1 7.7 0.5 3.4 3 0 0 3 3 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin BatD PF13584.6 gi|433639392|ref|YP_007285152.1| - 6.9 5.4 5.9 3 6.5 0.1 2.9 3 0 0 3 3 3 0 Oxygen tolerance SnoaL PF07366.12 gi|433639393|ref|YP_007285153.1| - 2.7e-27 95.0 0.0 3.3e-27 94.8 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|433639393|ref|YP_007285153.1| - 2.3e-18 66.7 0.1 2.9e-18 66.4 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain P_C PF06640.11 gi|433639394|ref|YP_007285154.1| - 0.0025 18.0 4.9 0.0034 17.6 4.9 1.1 1 0 0 1 1 1 1 P protein C-terminus Gmad2 PF10648.9 gi|433639394|ref|YP_007285154.1| - 0.022 15.0 0.1 0.061 13.6 0.1 1.7 1 0 0 1 1 1 0 Immunoglobulin-like domain of bacterial spore germination HTH_20 PF12840.7 gi|433639395|ref|YP_007285155.1| - 7e-06 26.0 0.0 1.8e-05 24.7 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain zf-TFIIB PF13453.6 gi|433639395|ref|YP_007285155.1| - 0.021 14.2 0.8 0.021 14.2 0.8 3.0 3 1 0 3 3 3 0 Transcription factor zinc-finger Pilus_CpaD PF09476.10 gi|433639395|ref|YP_007285155.1| - 0.083 12.6 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) DZR PF12773.7 gi|433639395|ref|YP_007285155.1| - 0.49 10.5 11.2 3.7 7.6 0.3 3.0 2 1 1 3 3 3 0 Double zinc ribbon Cytochrom_c3_2 PF14537.6 gi|433639395|ref|YP_007285155.1| - 0.61 10.6 11.0 46 4.6 11.0 2.4 1 1 0 1 1 1 0 Cytochrome c3 HypA PF01155.19 gi|433639395|ref|YP_007285155.1| - 2 8.5 10.3 5.3 7.1 1.4 3.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2039 PF10217.9 gi|433639395|ref|YP_007285155.1| - 5.9 7.3 6.1 4.3 7.7 0.6 2.6 2 2 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) zinc-ribbons_6 PF07191.12 gi|433639395|ref|YP_007285155.1| - 8.2 6.5 13.6 5.7 7.0 0.6 2.9 2 1 0 2 2 2 0 zinc-ribbons TackOD1 PF18551.1 gi|433639395|ref|YP_007285155.1| - 8.8 5.9 7.9 5.3 6.7 0.4 2.9 3 0 0 3 3 3 0 Thaumarchaeal output domain 1 Usp PF00582.26 gi|433639396|ref|YP_007285156.1| - 2.8e-31 108.9 3.0 3.1e-31 108.8 3.0 1.0 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|433639396|ref|YP_007285156.1| - 0.028 14.3 6.6 0.25 11.2 6.6 2.0 1 1 0 1 1 1 0 Electron transfer flavoprotein domain UvrA_DNA-bind PF17755.1 gi|433639397|ref|YP_007285157.1| - 2.7e-31 108.2 0.1 6.1e-29 100.6 0.0 3.2 3 0 0 3 3 3 1 UvrA DNA-binding domain UvrA_inter PF17760.1 gi|433639397|ref|YP_007285157.1| - 2.9e-31 107.7 0.3 1.2e-30 105.7 0.0 2.2 2 0 0 2 2 1 1 UvrA interaction domain ABC_tran PF00005.27 gi|433639397|ref|YP_007285157.1| - 1.5e-20 74.1 0.0 8.3e-11 42.6 0.0 3.9 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|433639397|ref|YP_007285157.1| - 8.2e-13 48.3 0.0 0.025 14.0 0.0 4.2 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433639397|ref|YP_007285157.1| - 3.1e-08 33.2 0.0 0.0027 17.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433639397|ref|YP_007285157.1| - 9e-07 29.4 0.0 0.015 15.6 0.0 3.2 3 0 0 3 3 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|433639397|ref|YP_007285157.1| - 1.6e-05 25.5 0.0 0.0099 16.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|433639397|ref|YP_007285157.1| - 3.4e-05 24.1 0.1 0.55 10.5 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_15 PF13175.6 gi|433639397|ref|YP_007285157.1| - 7.6e-05 22.6 0.1 0.12 12.1 0.0 4.0 4 0 0 4 4 4 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433639397|ref|YP_007285157.1| - 0.00012 22.1 0.0 0.65 9.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_21 PF13304.6 gi|433639397|ref|YP_007285157.1| - 0.00015 21.7 8.6 0.46 10.2 0.0 4.3 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system DnaJ_CXXCXGXG PF00684.19 gi|433639397|ref|YP_007285157.1| - 0.00024 21.4 9.8 0.013 15.8 1.2 3.8 4 0 0 4 4 3 1 DnaJ central domain ATPase PF06745.13 gi|433639397|ref|YP_007285157.1| - 0.0003 20.2 0.0 0.21 10.9 0.0 2.4 2 0 0 2 2 2 2 KaiC cobW PF02492.19 gi|433639397|ref|YP_007285157.1| - 0.00047 19.8 0.2 0.095 12.3 0.0 2.5 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|433639397|ref|YP_007285157.1| - 0.00072 20.1 0.0 0.75 10.4 0.0 3.0 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.6 gi|433639397|ref|YP_007285157.1| - 0.0021 18.1 0.0 0.98 9.5 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 gi|433639397|ref|YP_007285157.1| - 0.0026 17.9 0.0 6.3 6.9 0.0 3.3 3 0 0 3 3 3 0 AAA domain NACHT PF05729.12 gi|433639397|ref|YP_007285157.1| - 0.0038 17.2 0.0 0.46 10.4 0.0 2.7 3 0 0 3 3 2 1 NACHT domain AAA_25 PF13481.6 gi|433639397|ref|YP_007285157.1| - 0.0041 16.7 0.0 1.5 8.4 0.0 2.8 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 gi|433639397|ref|YP_007285157.1| - 0.0042 17.0 0.1 4.5 7.1 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase Zn-ribbon_8 PF09723.10 gi|433639397|ref|YP_007285157.1| - 0.0083 16.2 15.1 2.7 8.2 0.7 4.5 4 0 0 4 4 4 1 Zinc ribbon domain DUF2075 PF09848.9 gi|433639397|ref|YP_007285157.1| - 0.0088 15.3 0.1 3.5 6.8 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|433639397|ref|YP_007285157.1| - 0.02 14.6 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 gi|433639397|ref|YP_007285157.1| - 0.026 14.9 0.0 1.3 9.4 0.0 2.6 2 0 0 2 2 2 0 RNA helicase Zn_Tnp_IS91 PF14319.6 gi|433639397|ref|YP_007285157.1| - 0.028 14.5 1.5 4.8 7.3 0.0 3.3 3 0 0 3 3 3 0 Transposase zinc-binding domain NMDAR2_C PF10565.9 gi|433639397|ref|YP_007285157.1| - 0.052 12.4 0.0 0.093 11.6 0.0 1.3 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus ATPase_2 PF01637.18 gi|433639397|ref|YP_007285157.1| - 0.071 13.0 0.0 17 5.2 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|433639397|ref|YP_007285157.1| - 0.071 12.8 0.0 5.4 6.7 0.0 2.8 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|433639397|ref|YP_007285157.1| - 0.1 12.3 0.1 2 8.1 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 gi|433639397|ref|YP_007285157.1| - 0.13 11.4 0.0 1.3 8.2 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_24 PF13479.6 gi|433639397|ref|YP_007285157.1| - 0.14 11.9 0.3 9.8 5.8 0.0 3.1 3 0 0 3 3 3 0 AAA domain DZR PF12773.7 gi|433639397|ref|YP_007285157.1| - 0.24 11.5 8.1 7.6 6.7 0.4 4.0 4 0 0 4 4 4 0 Double zinc ribbon MMR_HSR1 PF01926.23 gi|433639397|ref|YP_007285157.1| - 0.61 10.2 2.9 9.8 6.3 0.1 3.4 4 0 0 4 4 3 0 50S ribosome-binding GTPase Anti-TRAP PF15777.5 gi|433639397|ref|YP_007285157.1| - 6.8 6.7 11.8 21 5.2 0.0 4.0 4 0 0 4 4 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein Flavodoxin_5 PF12724.7 gi|433639398|ref|YP_007285158.1| - 5.7e-38 130.4 0.0 7.6e-38 130.0 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|433639398|ref|YP_007285158.1| - 6.2e-05 23.2 0.1 0.00011 22.5 0.1 1.5 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|433639398|ref|YP_007285158.1| - 0.0001 22.1 0.1 0.00015 21.5 0.1 1.4 1 1 0 1 1 1 1 Flavodoxin domain Nitroreductase PF00881.24 gi|433639399|ref|YP_007285159.1| - 1.1e-16 61.4 1.8 1.3e-08 35.0 0.0 3.2 2 1 1 3 3 3 3 Nitroreductase family TM1586_NiRdase PF14512.6 gi|433639399|ref|YP_007285159.1| - 1.1e-05 25.1 0.0 3.3e-05 23.6 0.0 1.8 2 0 0 2 2 2 1 Putative TM nitroreductase DUF108 PF01958.18 gi|433639399|ref|YP_007285159.1| - 0.1 13.0 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function DUF108 Beta-lactamase PF00144.24 gi|433639400|ref|YP_007285160.1| - 1e-59 202.4 3.2 1.5e-59 201.9 3.2 1.2 1 0 0 1 1 1 1 Beta-lactamase TAT_signal PF10518.9 gi|433639400|ref|YP_007285160.1| - 0.012 15.5 1.5 0.012 15.5 1.5 4.4 6 0 0 6 6 6 0 TAT (twin-arginine translocation) pathway signal sequence Beta-lactamase2 PF13354.6 gi|433639400|ref|YP_007285160.1| - 0.049 13.2 0.0 2.5 7.6 0.0 2.2 1 1 0 1 1 1 0 Beta-lactamase enzyme family HATPase_c PF02518.26 gi|433639401|ref|YP_007285161.1| - 2.1e-15 57.2 0.0 4.4e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|433639401|ref|YP_007285161.1| - 3.7e-08 33.4 0.1 1e-07 32.0 0.1 1.8 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.7 gi|433639401|ref|YP_007285161.1| - 9.1e-07 29.1 0.0 2e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 gi|433639401|ref|YP_007285161.1| - 0.00018 21.4 0.0 0.00052 20.0 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|433639401|ref|YP_007285161.1| - 0.00064 19.7 0.0 0.0014 18.6 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|433639401|ref|YP_007285161.1| - 0.0025 17.7 0.0 0.0045 16.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|433639401|ref|YP_007285161.1| - 0.0029 17.9 0.8 0.026 14.8 0.1 2.4 2 0 0 2 2 2 1 PAS fold PAS_3 PF08447.12 gi|433639401|ref|YP_007285161.1| - 0.038 14.3 0.0 0.069 13.5 0.0 1.4 1 0 0 1 1 1 0 PAS fold HisKA_4TM PF16926.5 gi|433639401|ref|YP_007285161.1| - 0.057 13.0 0.2 0.057 13.0 0.2 2.5 2 1 0 2 2 2 0 Archaeal 4TM region of histidine kinase HisKA PF00512.25 gi|433639401|ref|YP_007285161.1| - 0.085 12.9 1.1 0.17 12.0 0.3 1.9 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain Sortilin-Vps10 PF15902.5 gi|433639402|ref|YP_007285162.1| - 2.2e-10 39.9 0.0 2.3e-06 26.7 0.0 3.5 1 1 1 3 3 3 3 Sortilin, neurotensin receptor 3, BNR PF02012.20 gi|433639402|ref|YP_007285162.1| - 1.9e-09 36.1 17.8 0.067 13.2 0.4 5.7 6 0 0 6 6 6 4 BNR/Asp-box repeat BNR_2 PF13088.6 gi|433639402|ref|YP_007285162.1| - 3.2e-06 26.7 0.7 0.023 14.0 0.2 3.4 1 1 1 2 2 2 2 BNR repeat-like domain PSII_BNR PF14870.6 gi|433639402|ref|YP_007285162.1| - 4.2e-06 26.2 1.7 0.79 8.9 0.2 3.8 2 1 2 4 4 4 4 Photosynthesis system II assembly factor YCF48 DUF4185 PF13810.6 gi|433639402|ref|YP_007285162.1| - 0.00017 20.9 1.3 7.6 5.7 0.0 4.0 3 1 1 4 4 4 2 Domain of unknown function (DUF4185) BNR_6 PF15899.5 gi|433639402|ref|YP_007285162.1| - 0.00042 20.1 0.3 0.087 12.9 0.2 2.8 2 0 0 2 2 2 1 BNR-Asp box repeat PQQ_3 PF13570.6 gi|433639402|ref|YP_007285162.1| - 8.7 7.0 16.7 39 4.9 0.3 5.4 5 1 1 6 6 6 0 PQQ-like domain GPDPase_memb PF10110.9 gi|433639403|ref|YP_007285163.1| - 0.0062 15.4 2.0 0.012 14.4 2.0 1.4 1 0 0 1 1 1 1 Membrane domain of glycerophosphoryl diester phosphodiesterase DUF975 PF06161.11 gi|433639403|ref|YP_007285163.1| - 0.89 9.3 3.7 1.2 8.9 3.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF975) Bac_export_3 PF01313.19 gi|433639403|ref|YP_007285163.1| - 3.1 7.8 11.1 9.1 6.3 3.3 2.7 2 0 0 2 2 2 0 Bacterial export proteins, family 3 PQQ_2 PF13360.6 gi|433639404|ref|YP_007285164.1| - 1e-43 149.6 31.6 3.6e-22 79.1 10.0 3.3 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|433639404|ref|YP_007285164.1| - 1e-26 92.6 36.4 1e-07 32.2 1.0 8.4 8 0 0 8 8 8 7 PQQ-like domain PQQ PF01011.21 gi|433639404|ref|YP_007285164.1| - 3.1e-16 58.4 21.6 0.00026 20.8 0.0 7.6 8 0 0 8 8 8 4 PQQ enzyme repeat TAT_signal PF10518.9 gi|433639404|ref|YP_007285164.1| - 0.048 13.5 2.4 0.16 11.8 2.4 1.9 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence RHS_repeat PF05593.14 gi|433639404|ref|YP_007285164.1| - 2 9.0 7.4 1.2 9.7 0.7 3.8 4 0 0 4 4 4 0 RHS Repeat Ribosomal_S24e PF01282.19 gi|433639405|ref|YP_007285165.1| - 1.4e-24 85.8 0.1 1.8e-24 85.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S27 PF01599.19 gi|433639406|ref|YP_007285166.1| - 5e-12 45.8 2.9 5.8e-12 45.6 2.9 1.2 1 0 0 1 1 1 1 Ribosomal protein S27a FYVE PF01363.21 gi|433639406|ref|YP_007285166.1| - 0.0042 17.2 0.7 0.0046 17.1 0.7 1.1 1 0 0 1 1 1 1 FYVE zinc finger Ribosomal_L37e PF01907.19 gi|433639406|ref|YP_007285166.1| - 0.0079 16.3 1.1 0.0098 16.0 1.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e RNA_POL_M_15KD PF02150.16 gi|433639406|ref|YP_007285166.1| - 0.0084 16.0 0.8 0.013 15.3 0.8 1.2 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit Nudix_N_2 PF14803.6 gi|433639406|ref|YP_007285166.1| - 0.011 15.6 5.6 0.47 10.4 0.3 2.1 2 0 0 2 2 2 0 Nudix N-terminal TF_Zn_Ribbon PF08271.12 gi|433639406|ref|YP_007285166.1| - 0.025 14.1 2.1 0.04 13.5 1.8 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|433639406|ref|YP_007285166.1| - 0.068 12.6 6.2 0.26 10.8 6.2 1.8 1 1 0 1 1 1 0 zinc-ribbon domain FlhC PF05280.11 gi|433639406|ref|YP_007285166.1| - 0.072 12.8 0.1 0.08 12.7 0.1 1.0 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) HypA PF01155.19 gi|433639406|ref|YP_007285166.1| - 0.089 12.8 0.7 0.086 12.9 0.7 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Peptidase_M22 PF00814.25 gi|433639407|ref|YP_007285167.1| - 1.7e-73 247.6 0.5 4.9e-73 246.2 0.5 1.6 1 1 0 1 1 1 1 Glycoprotease family Kdo PF06293.14 gi|433639407|ref|YP_007285167.1| - 0.00061 19.2 0.0 0.0015 17.9 0.0 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family BcrAD_BadFG PF01869.20 gi|433639407|ref|YP_007285167.1| - 0.089 12.3 0.3 0.31 10.5 0.0 2.0 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family OMP_b-brl_2 PF13568.6 gi|433639408|ref|YP_007285168.1| - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Outer membrane protein beta-barrel domain Ham1p_like PF01725.16 gi|433639409|ref|YP_007285169.1| - 1.5e-49 168.5 0.0 1.7e-49 168.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family PIN_3 PF13470.6 gi|433639410|ref|YP_007285170.1| - 0.0052 17.5 5.9 0.068 13.9 5.9 2.0 1 1 0 1 1 1 1 PIN domain DUF4128 PF13554.6 gi|433639410|ref|YP_007285170.1| - 0.1 12.6 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage related domain of unknown function Amidase_2 PF01510.25 gi|433639412|ref|YP_007285172.1| - 1.5e-25 90.1 3.3 2.5e-25 89.4 3.3 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase SH3_3 PF08239.11 gi|433639412|ref|YP_007285172.1| - 2.1e-12 47.1 4.8 4.3e-08 33.3 0.7 2.5 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_4 PF06347.13 gi|433639412|ref|YP_007285172.1| - 0.00022 21.0 0.0 0.34 10.8 0.0 2.6 2 0 0 2 2 2 2 Bacterial SH3 domain TAT_signal PF10518.9 gi|433639412|ref|YP_007285172.1| - 0.41 10.6 7.8 2 8.4 7.8 2.2 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence RE_SinI PF09570.10 gi|433639412|ref|YP_007285172.1| - 0.53 9.5 3.5 1.6 7.9 0.1 2.8 3 0 0 3 3 3 0 SinI restriction endonuclease DHDPS PF00701.22 gi|433639413|ref|YP_007285173.1| - 1.6e-60 204.3 0.0 1.8e-60 204.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family RTC4 PF14474.6 gi|433639413|ref|YP_007285173.1| - 0.053 13.7 0.0 0.91 9.7 0.0 2.2 2 1 0 2 2 2 0 RTC4-like domain HTH_20 PF12840.7 gi|433639414|ref|YP_007285174.1| - 0.017 15.2 0.4 0.028 14.5 0.4 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain MIT_LIKE_ACTX PF17556.2 gi|433639414|ref|YP_007285174.1| - 0.083 13.5 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 MIT-like atracotoxin family HTH_24 PF13412.6 gi|433639414|ref|YP_007285174.1| - 0.19 11.3 0.0 2 8.1 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_10 PF04967.12 gi|433639415|ref|YP_007285175.1| - 3.3e-15 55.6 0.1 5.2e-15 55.0 0.1 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639415|ref|YP_007285175.1| - 1.2e-10 41.5 0.2 1.9e-10 40.9 0.2 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_AsnC-type PF13404.6 gi|433639415|ref|YP_007285175.1| - 0.01 15.7 0.1 0.03 14.1 0.1 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|433639415|ref|YP_007285175.1| - 0.095 12.6 0.1 0.49 10.3 0.0 2.2 2 0 0 2 2 2 0 MarR family His_biosynth PF00977.21 gi|433639416|ref|YP_007285176.1| - 0.05 13.0 0.0 0.05 13.0 0.0 1.0 1 0 0 1 1 1 0 Histidine biosynthesis protein LUD_dom PF02589.15 gi|433639417|ref|YP_007285177.1| - 1.4e-37 129.2 0.1 1.8e-37 128.9 0.1 1.1 1 0 0 1 1 1 1 LUD domain OKR_DC_1_N PF03709.15 gi|433639417|ref|YP_007285177.1| - 0.0021 18.3 0.1 0.0054 17.0 0.0 1.8 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain Sigma70_r1_1 PF03979.14 gi|433639417|ref|YP_007285177.1| - 0.0098 15.9 0.6 0.0098 15.9 0.6 1.7 2 0 0 2 2 2 1 Sigma-70 factor, region 1.1 PASTA PF03793.19 gi|433639417|ref|YP_007285177.1| - 0.075 12.9 0.1 0.3 11.0 0.0 2.0 2 0 0 2 2 2 0 PASTA domain AAA_24 PF13479.6 gi|433639417|ref|YP_007285177.1| - 0.12 12.1 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF724 PF05266.14 gi|433639417|ref|YP_007285177.1| - 0.14 11.9 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) AIM24 PF01987.17 gi|433639418|ref|YP_007285178.1| - 1.1e-53 182.1 0.0 1.3e-53 181.8 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 HTH_20 PF12840.7 gi|433639419|ref|YP_007285179.1| - 1.1e-05 25.4 1.0 1.8e-05 24.7 1.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|433639419|ref|YP_007285179.1| - 0.0013 18.6 0.0 0.0022 17.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|433639419|ref|YP_007285179.1| - 0.017 15.0 0.1 0.03 14.2 0.1 1.4 1 0 0 1 1 1 0 MarR family DprA_WH PF17782.1 gi|433639419|ref|YP_007285179.1| - 0.029 14.5 0.3 0.05 13.7 0.3 1.4 1 0 0 1 1 1 0 DprA winged helix domain HTH_24 PF13412.6 gi|433639419|ref|YP_007285179.1| - 0.031 13.8 0.0 0.12 12.0 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding B5 PF03484.15 gi|433639419|ref|YP_007285179.1| - 0.05 13.9 0.0 0.069 13.5 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetase B5 domain HTH_40 PF14493.6 gi|433639419|ref|YP_007285179.1| - 0.075 13.5 0.0 0.092 13.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain UPF0547 PF10571.9 gi|433639419|ref|YP_007285179.1| - 0.19 11.8 4.2 1.3 9.2 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Rubredoxin_2 PF18073.1 gi|433639419|ref|YP_007285179.1| - 6 6.7 7.6 10 5.9 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-trcl PF13451.6 gi|433639419|ref|YP_007285179.1| - 6.8 6.7 7.4 0.78 9.7 1.3 2.0 1 1 1 2 2 2 0 Probable zinc-ribbon domain HTH_20 PF12840.7 gi|433639420|ref|YP_007285180.1| - 0.0089 16.1 0.4 0.37 10.9 0.0 2.9 2 1 1 3 3 3 1 Helix-turn-helix domain Aminotran_4 PF01063.19 gi|433639421|ref|YP_007285181.1| - 2.7e-56 190.9 0.0 3.3e-56 190.7 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV GP4 PF03010.14 gi|433639421|ref|YP_007285181.1| - 0.087 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 GP4 GATase PF00117.28 gi|433639422|ref|YP_007285182.1| - 8.9e-42 143.0 0.0 1.2e-41 142.6 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433639422|ref|YP_007285182.1| - 1.4e-08 34.8 0.8 4.2e-08 33.2 0.8 1.7 1 1 0 1 1 1 1 Peptidase C26 E3_UbLigase_EDD PF11547.8 gi|433639422|ref|YP_007285182.1| - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD Chorismate_bind PF00425.18 gi|433639423|ref|YP_007285183.1| - 2.5e-99 332.0 0.0 5.4e-99 330.9 0.0 1.5 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|433639423|ref|YP_007285183.1| - 8.7e-11 42.2 0.0 4.1e-10 40.0 0.0 2.1 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region HHH_5 PF14520.6 gi|433639424|ref|YP_007285184.1| - 5.6e-07 30.1 0.1 1.4e-06 28.8 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain DUF4332 PF14229.6 gi|433639424|ref|YP_007285184.1| - 0.0035 17.6 0.1 0.016 15.4 0.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4332) IMS_HHH PF11798.8 gi|433639424|ref|YP_007285184.1| - 0.0079 16.5 0.2 0.054 13.8 0.0 2.1 2 0 0 2 2 2 1 IMS family HHH motif BAF PF02961.14 gi|433639424|ref|YP_007285184.1| - 0.016 15.6 0.0 0.028 14.8 0.0 1.3 1 0 0 1 1 1 0 Barrier to autointegration factor Shikimate_dh_N PF08501.11 gi|433639425|ref|YP_007285185.1| - 8.6e-27 93.2 0.0 1.5e-26 92.4 0.0 1.4 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|433639425|ref|YP_007285185.1| - 3.1e-13 49.2 1.4 6.2e-13 48.3 1.4 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|433639425|ref|YP_007285185.1| - 2.7e-12 46.9 0.0 4.2e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase adh_short PF00106.25 gi|433639425|ref|YP_007285185.1| - 8.2e-05 22.1 0.6 0.00012 21.6 0.6 1.2 1 0 0 1 1 1 1 short chain dehydrogenase F420_oxidored PF03807.17 gi|433639425|ref|YP_007285185.1| - 0.00016 22.2 0.1 0.00029 21.4 0.1 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|433639425|ref|YP_007285185.1| - 0.00017 21.0 0.0 0.00028 20.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|433639425|ref|YP_007285185.1| - 0.0044 17.3 0.1 0.0078 16.5 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain THF_DHG_CYH_C PF02882.19 gi|433639425|ref|YP_007285185.1| - 0.0087 15.4 0.1 0.073 12.4 0.1 2.0 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ApbA PF02558.16 gi|433639425|ref|YP_007285185.1| - 0.014 15.0 0.2 0.022 14.4 0.2 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 gi|433639425|ref|YP_007285185.1| - 0.018 15.2 0.1 0.028 14.6 0.1 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|433639425|ref|YP_007285185.1| - 0.025 13.8 0.5 0.033 13.4 0.5 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|433639425|ref|YP_007285185.1| - 0.038 13.9 0.2 0.052 13.4 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 gi|433639425|ref|YP_007285185.1| - 0.057 13.0 0.0 0.092 12.3 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 gi|433639425|ref|YP_007285185.1| - 0.09 13.2 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding ThiF PF00899.21 gi|433639425|ref|YP_007285185.1| - 0.18 11.2 0.6 0.3 10.4 0.6 1.3 1 0 0 1 1 1 0 ThiF family AdoHcyase_NAD PF00670.21 gi|433639425|ref|YP_007285185.1| - 0.19 11.8 0.7 0.25 11.4 0.1 1.5 2 0 0 2 2 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|433639425|ref|YP_007285185.1| - 0.22 11.5 0.6 0.36 10.8 0.6 1.4 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus tRNA_deacylase PF04414.12 gi|433639426|ref|YP_007285186.1| - 3.2e-61 206.4 0.0 4.4e-61 206.0 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Tubulin PF00091.25 gi|433639427|ref|YP_007285187.1| - 1.2e-40 139.8 0.3 1.9e-40 139.2 0.3 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|433639427|ref|YP_007285187.1| - 4e-36 123.2 3.1 7.3e-36 122.4 1.7 2.2 2 0 0 2 2 2 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 gi|433639427|ref|YP_007285187.1| - 0.0016 18.3 1.8 0.0061 16.5 0.1 2.4 3 0 0 3 3 3 1 NAD(P)H-binding Tubulin_2 PF13809.6 gi|433639427|ref|YP_007285187.1| - 0.023 13.9 7.7 0.042 13.0 2.0 2.6 1 1 1 2 2 2 0 Tubulin like Fer2 PF00111.27 gi|433639428|ref|YP_007285188.1| - 5.7e-11 42.2 4.6 7.2e-11 41.9 4.6 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DHODB_Fe-S_bind PF10418.9 gi|433639428|ref|YP_007285188.1| - 0.035 13.9 0.7 0.083 12.7 0.4 1.8 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Fer2_3 PF13085.6 gi|433639428|ref|YP_007285188.1| - 0.037 14.1 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Trp_halogenase PF04820.14 gi|433639429|ref|YP_007285189.1| - 1.2e-11 44.1 1.7 3.5e-08 32.8 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|433639429|ref|YP_007285189.1| - 4.3e-09 36.1 3.5 2.6e-08 33.5 3.5 2.0 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|433639429|ref|YP_007285189.1| - 5.9e-07 28.9 0.3 1.1e-06 28.1 0.3 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A DAO PF01266.24 gi|433639429|ref|YP_007285189.1| - 6.1e-07 29.3 10.3 0.0037 16.9 0.8 2.4 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|433639429|ref|YP_007285189.1| - 1.2e-06 27.9 2.0 1.2e-06 27.9 2.0 2.6 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 gi|433639429|ref|YP_007285189.1| - 1.4e-05 25.2 0.5 1.4e-05 25.2 0.5 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|433639429|ref|YP_007285189.1| - 9.3e-05 21.3 0.2 0.00023 20.0 0.2 1.6 1 0 0 1 1 1 1 HI0933-like protein FAD_oxidored PF12831.7 gi|433639429|ref|YP_007285189.1| - 9.8e-05 21.9 11.3 0.004 16.6 2.3 2.7 3 0 0 3 3 3 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|433639429|ref|YP_007285189.1| - 0.00019 21.9 8.1 0.0028 18.2 0.2 2.8 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|433639429|ref|YP_007285189.1| - 0.00025 20.4 1.3 0.00025 20.4 1.3 2.5 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|433639429|ref|YP_007285189.1| - 0.00033 19.8 5.4 0.052 12.6 0.6 2.5 3 0 0 3 3 3 2 Lycopene cyclase protein Thi4 PF01946.17 gi|433639429|ref|YP_007285189.1| - 0.0017 17.7 1.1 0.0035 16.6 0.3 1.9 2 0 0 2 2 2 1 Thi4 family ApbA PF02558.16 gi|433639429|ref|YP_007285189.1| - 0.0039 16.8 0.1 0.0083 15.8 0.1 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 gi|433639429|ref|YP_007285189.1| - 0.015 15.2 0.1 0.029 14.2 0.1 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|433639429|ref|YP_007285189.1| - 0.029 13.6 0.3 0.053 12.8 0.3 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|433639429|ref|YP_007285189.1| - 0.61 9.3 5.9 0.096 12.0 1.0 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Peptidase_M54 PF07998.11 gi|433639430|ref|YP_007285190.1| - 2.6e-09 37.4 0.0 3.9e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M54 LemA PF04011.12 gi|433639431|ref|YP_007285191.1| - 3.1e-35 121.2 1.1 4e-35 120.9 1.1 1.1 1 0 0 1 1 1 1 LemA family HSCB_C PF07743.13 gi|433639431|ref|YP_007285191.1| - 6 7.4 10.9 3.6 8.1 0.6 3.0 1 1 2 3 3 3 0 HSCB C-terminal oligomerisation domain tRNA_anti-codon PF01336.25 gi|433639432|ref|YP_007285192.1| - 0.0038 17.2 0.1 0.12 12.4 0.1 2.5 1 1 0 1 1 1 1 OB-fold nucleic acid binding domain GIDE PF12483.8 gi|433639432|ref|YP_007285192.1| - 0.011 15.1 0.0 0.025 14.0 0.0 1.5 2 0 0 2 2 2 0 E3 Ubiquitin ligase MFS_1 PF07690.16 gi|433639433|ref|YP_007285193.1| - 1.2e-44 152.7 48.2 6.5e-27 94.4 19.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|433639433|ref|YP_007285193.1| - 0.018 14.4 29.1 0.035 13.4 29.1 1.6 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 gi|433639433|ref|YP_007285193.1| - 0.032 13.1 16.6 0.2 10.5 5.1 2.1 1 1 1 2 2 2 0 MFS_1 like family Antibiotic_NAT PF02522.14 gi|433639434|ref|YP_007285194.1| - 1.3e-78 263.8 0.0 1.5e-78 263.6 0.0 1.0 1 0 0 1 1 1 1 Aminoglycoside 3-N-acetyltransferase ATPase-cat_bd PF12156.8 gi|433639435|ref|YP_007285195.1| - 0.011 16.4 0.8 0.019 15.7 0.8 1.5 1 1 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase zinc_ribbon_9 PF14369.6 gi|433639435|ref|YP_007285195.1| - 0.54 10.6 4.8 0.67 10.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon Peptidase_M20 PF01546.28 gi|433639436|ref|YP_007285196.1| - 2.9e-22 79.4 7.1 3.9e-22 79.0 7.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|433639436|ref|YP_007285196.1| - 4e-11 42.8 2.6 4.4e-11 42.7 0.2 2.3 3 0 0 3 3 3 1 Peptidase dimerisation domain NlpE_C PF17185.4 gi|433639436|ref|YP_007285196.1| - 0.17 12.2 0.0 0.39 11.0 0.0 1.6 1 0 0 1 1 1 0 NlpE C-terminal OB domain Ribosomal_S10 PF00338.22 gi|433639437|ref|YP_007285197.1| - 4.7e-12 46.0 0.0 5.3e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e NUDIX PF00293.28 gi|433639438|ref|YP_007285198.1| - 2.4e-18 66.4 0.4 3e-18 66.1 0.4 1.1 1 0 0 1 1 1 1 NUDIX domain AAA_17 PF13207.6 gi|433639438|ref|YP_007285198.1| - 0.028 14.8 0.1 0.11 12.9 0.0 1.8 1 1 1 2 2 2 0 AAA domain Phage_holin_3_6 PF07332.11 gi|433639439|ref|YP_007285199.1| - 0.33 11.0 31.2 0.034 14.2 9.9 3.0 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Abhydrolase_2 PF02230.16 gi|433639441|ref|YP_007285201.1| - 0.0025 17.7 0.0 0.003 17.4 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase VirJ PF06057.11 gi|433639441|ref|YP_007285201.1| - 0.0096 15.8 0.0 0.12 12.2 0.0 2.0 1 1 1 2 2 2 1 Bacterial virulence protein (VirJ) Hydrolase_4 PF12146.8 gi|433639441|ref|YP_007285201.1| - 0.029 13.6 1.0 3.3 6.9 0.5 2.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 gi|433639441|ref|YP_007285201.1| - 0.05 13.2 0.9 0.17 11.5 0.1 1.8 1 1 0 2 2 2 0 X-Pro dipeptidyl-peptidase (S15 family) PspA_IM30 PF04012.12 gi|433639442|ref|YP_007285202.1| - 1.7e-30 106.3 34.2 1.7e-30 106.3 34.2 1.4 1 1 0 1 1 1 1 PspA/IM30 family Snf7 PF03357.21 gi|433639442|ref|YP_007285202.1| - 0.0025 17.4 23.0 0.0025 17.4 23.0 4.1 1 1 2 3 3 3 1 Snf7 DUF1664 PF07889.12 gi|433639442|ref|YP_007285202.1| - 0.012 15.6 4.1 0.012 15.6 4.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) YabA PF06156.13 gi|433639442|ref|YP_007285202.1| - 0.013 16.1 26.4 0.097 13.3 4.9 3.4 1 1 2 3 3 3 0 Initiation control protein YabA DUF3535 PF12054.8 gi|433639442|ref|YP_007285202.1| - 0.032 13.5 12.8 0.038 13.2 12.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3535) DUF2576 PF10845.8 gi|433639442|ref|YP_007285202.1| - 0.058 13.0 1.5 9.4 5.9 0.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) DUF1910 PF08928.10 gi|433639442|ref|YP_007285202.1| - 0.15 12.1 8.1 0.026 14.5 2.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1910) Syntaxin_2 PF14523.6 gi|433639442|ref|YP_007285202.1| - 0.28 11.6 20.1 0.059 13.8 6.4 3.9 2 1 1 3 3 3 0 Syntaxin-like protein ERM PF00769.19 gi|433639442|ref|YP_007285202.1| - 0.44 10.3 45.1 0.79 9.5 45.1 1.5 1 1 0 1 1 1 0 Ezrin/radixin/moesin family FOXP-CC PF16159.5 gi|433639442|ref|YP_007285202.1| - 0.49 11.0 9.3 1.9 9.2 0.2 2.8 2 0 0 2 2 2 0 FOXP coiled-coil domain AKNA PF12443.8 gi|433639442|ref|YP_007285202.1| - 1.1 9.9 14.9 0.54 10.9 9.0 3.0 1 1 1 2 2 2 0 AT-hook-containing transcription factor Spc7 PF08317.11 gi|433639442|ref|YP_007285202.1| - 1.2 7.9 42.6 0.007 15.3 25.2 2.7 1 1 2 3 3 3 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 gi|433639442|ref|YP_007285202.1| - 1.7 8.4 39.7 1.9 8.3 10.3 3.8 1 1 3 4 4 4 0 Phage minor structural protein GP20 COG6 PF06419.11 gi|433639442|ref|YP_007285202.1| - 1.7 6.7 21.2 0.025 12.8 1.0 3.0 1 1 2 3 3 3 0 Conserved oligomeric complex COG6 FapA PF03961.13 gi|433639442|ref|YP_007285202.1| - 2.3 6.7 25.8 1.2 7.7 17.4 2.4 1 1 2 3 3 3 0 Flagellar Assembly Protein A DUF5082 PF16888.5 gi|433639442|ref|YP_007285202.1| - 5.6 7.3 29.7 94 3.3 17.9 3.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF724 PF05266.14 gi|433639442|ref|YP_007285202.1| - 6.8 6.5 33.1 3.9 7.3 22.4 3.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 gi|433639442|ref|YP_007285202.1| - 7.4 6.6 40.8 0.74 9.8 19.0 3.6 1 1 2 3 3 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Nre_C PF04895.12 gi|433639442|ref|YP_007285202.1| - 7.8 6.5 10.7 15 5.6 2.1 3.4 2 1 0 3 3 3 0 Archaeal Nre, C-terminal APG6_N PF17675.1 gi|433639442|ref|YP_007285202.1| - 8.5 6.9 52.1 0.027 15.0 26.5 3.3 1 1 2 3 3 3 0 Apg6 coiled-coil region YlqD PF11068.8 gi|433639442|ref|YP_007285202.1| - 8.7 6.7 39.2 2.2 8.7 17.0 3.6 1 1 2 3 3 3 0 YlqD protein Sec5 PF15469.6 gi|433639442|ref|YP_007285202.1| - 9.2 6.0 18.0 0.05 13.4 1.8 3.1 2 1 1 3 3 3 0 Exocyst complex component Sec5 QCR10 PF09796.9 gi|433639443|ref|YP_007285203.1| - 0.37 10.9 3.6 5.4 7.2 0.0 2.9 2 1 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Oxidored_q2 PF00420.24 gi|433639443|ref|YP_007285203.1| - 0.79 9.4 6.6 4.1 7.1 6.7 2.1 1 1 1 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PhrC_PhrF PF11131.8 gi|433639443|ref|YP_007285203.1| - 6.3 6.5 13.7 16 5.2 6.3 2.7 2 0 0 2 2 2 0 Rap-phr extracellular signalling Peptidase_M48 PF01435.18 gi|433639445|ref|YP_007285205.1| - 5.2e-36 124.3 0.0 6.5e-36 124.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|433639445|ref|YP_007285205.1| - 1.5e-05 24.4 0.0 2.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 TAT_signal PF10518.9 gi|433639446|ref|YP_007285206.1| - 0.00017 21.3 1.4 0.00041 20.1 1.4 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence NYN PF01936.18 gi|433639447|ref|YP_007285207.1| - 1.2e-34 119.9 0.1 1.4e-34 119.7 0.1 1.0 1 0 0 1 1 1 1 NYN domain FMO-like PF00743.19 gi|433639447|ref|YP_007285207.1| - 0.001 17.6 0.0 0.0013 17.3 0.0 1.1 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like SLATT_fungal PF18142.1 gi|433639448|ref|YP_007285208.1| - 0.016 15.2 3.7 0.016 15.2 3.7 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain SLATT_3 PF18184.1 gi|433639448|ref|YP_007285208.1| - 0.25 11.5 0.3 0.27 11.3 0.3 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 3 SseC PF04888.12 gi|433639448|ref|YP_007285208.1| - 0.37 10.3 3.5 0.43 10.1 3.5 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family TGT_C2 PF14810.6 gi|433639449|ref|YP_007285209.1| - 1.7e-25 88.9 0.1 3.2e-25 88.1 0.1 1.4 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|433639449|ref|YP_007285209.1| - 2e-17 62.9 0.5 3.5e-17 62.1 0.5 1.4 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|433639449|ref|YP_007285209.1| - 0.12 12.7 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 UPF0113 PUA domain Arch_flagellin PF01917.16 gi|433639450|ref|YP_007285210.1| - 0.13 12.5 1.1 6.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Archaebacterial flagellin NAC PF01849.18 gi|433639451|ref|YP_007285211.1| - 7.9e-17 61.0 0.1 1.1e-16 60.6 0.1 1.2 1 0 0 1 1 1 1 NAC domain UBA_4 PF14555.6 gi|433639451|ref|YP_007285211.1| - 2e-05 24.3 1.7 4.4e-05 23.2 0.9 1.9 2 0 0 2 2 2 1 UBA-like domain UBA PF00627.31 gi|433639451|ref|YP_007285211.1| - 0.084 12.8 1.4 0.084 12.8 1.4 1.9 2 0 0 2 2 2 0 UBA/TS-N domain CUE PF02845.16 gi|433639451|ref|YP_007285211.1| - 0.086 12.6 0.2 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 CUE domain GCD14 PF08704.10 gi|433639452|ref|YP_007285212.1| - 4.1e-13 49.6 0.0 1.1e-10 41.6 0.0 2.1 1 1 1 2 2 2 2 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|433639452|ref|YP_007285212.1| - 9.4e-08 32.0 0.0 1.2e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|433639452|ref|YP_007285212.1| - 1.2e-07 31.4 0.4 2.1e-07 30.7 0.4 1.4 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|433639452|ref|YP_007285212.1| - 3.2e-06 27.8 0.1 4.9e-06 27.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|433639452|ref|YP_007285212.1| - 9.1e-06 25.6 0.0 1.2e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_24 PF13578.6 gi|433639452|ref|YP_007285212.1| - 1.2e-05 26.2 0.1 2.3e-05 25.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|433639452|ref|YP_007285212.1| - 3.7e-05 23.3 0.1 6.7e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|433639452|ref|YP_007285212.1| - 0.0001 22.9 0.0 0.00017 22.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|433639452|ref|YP_007285212.1| - 0.00012 21.3 0.0 0.00023 20.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.20 gi|433639452|ref|YP_007285212.1| - 0.0002 20.7 0.0 0.00025 20.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|433639452|ref|YP_007285212.1| - 0.00036 20.4 0.0 0.00045 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|433639452|ref|YP_007285212.1| - 0.00089 19.1 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_3 PF01596.17 gi|433639452|ref|YP_007285212.1| - 0.00098 18.4 0.0 0.0012 18.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_12 PF08242.12 gi|433639452|ref|YP_007285212.1| - 0.05 14.3 0.1 0.093 13.5 0.1 1.5 1 1 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|433639452|ref|YP_007285212.1| - 0.056 13.1 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|433639452|ref|YP_007285212.1| - 0.086 12.8 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF726 PF05277.12 gi|433639452|ref|YP_007285212.1| - 0.14 11.1 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Methyltransf_15 PF09445.10 gi|433639452|ref|YP_007285212.1| - 0.22 11.1 0.0 0.26 10.9 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF2892 PF11127.8 gi|433639453|ref|YP_007285213.1| - 4.1e-16 58.8 7.4 5.9e-16 58.3 7.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) RseC_MucC PF04246.12 gi|433639453|ref|YP_007285213.1| - 0.36 10.8 3.4 0.42 10.6 3.4 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF2627 PF11118.8 gi|433639453|ref|YP_007285213.1| - 0.75 10.4 6.7 0.41 11.2 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) DUF3098 PF11297.8 gi|433639453|ref|YP_007285213.1| - 2.6 7.7 5.6 1.1 8.9 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) Trp_oprn_chp PF09534.10 gi|433639453|ref|YP_007285213.1| - 6.8 6.4 12.3 7.1 6.4 3.4 1.8 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) TFIIS_C PF01096.18 gi|433639454|ref|YP_007285214.1| - 1.1e-18 66.8 3.3 1.1e-18 66.8 3.3 2.7 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|433639454|ref|YP_007285214.1| - 3.3e-08 33.3 13.3 3.8e-08 33.1 1.2 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit PhnA_Zn_Ribbon PF08274.12 gi|433639454|ref|YP_007285214.1| - 2.8e-06 27.2 7.0 0.00019 21.3 0.1 3.4 3 1 0 3 3 3 1 PhnA Zinc-Ribbon DZR PF12773.7 gi|433639454|ref|YP_007285214.1| - 5.9e-05 23.0 7.7 0.014 15.4 0.4 2.8 2 1 0 2 2 2 2 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|433639454|ref|YP_007285214.1| - 0.00033 20.6 7.2 0.0035 17.3 2.3 2.6 2 1 0 2 2 2 1 Transposase zinc-ribbon domain FdhE PF04216.12 gi|433639454|ref|YP_007285214.1| - 0.00076 19.5 1.3 0.0012 18.8 0.1 1.8 2 0 0 2 2 2 1 Protein involved in formate dehydrogenase formation zf-ribbon_3 PF13248.6 gi|433639454|ref|YP_007285214.1| - 0.0013 18.1 8.3 0.5 9.9 0.1 3.5 3 1 0 3 3 3 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|433639454|ref|YP_007285214.1| - 0.0023 17.4 11.2 0.0025 17.3 0.5 3.5 2 2 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|433639454|ref|YP_007285214.1| - 0.0046 16.6 11.7 0.64 9.7 2.5 4.1 3 1 0 3 3 3 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 OrfB_Zn_ribbon PF07282.11 gi|433639454|ref|YP_007285214.1| - 0.013 15.4 9.6 0.37 10.7 0.6 2.4 2 1 0 2 2 2 0 Putative transposase DNA-binding domain zf-RRPl_C4 PF17026.5 gi|433639454|ref|YP_007285214.1| - 0.03 14.4 4.5 0.11 12.6 4.5 1.9 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF3797 PF12677.7 gi|433639454|ref|YP_007285214.1| - 0.068 13.1 1.0 0.16 11.9 0.0 2.2 3 0 0 3 3 2 0 Domain of unknown function (DUF3797) zf-C4pol PF14260.6 gi|433639454|ref|YP_007285214.1| - 0.078 13.5 5.4 6.6 7.3 5.4 2.7 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta zinc_ribbon_2 PF13240.6 gi|433639454|ref|YP_007285214.1| - 0.12 12.2 9.8 0.3 10.9 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|433639454|ref|YP_007285214.1| - 0.14 11.7 10.7 1.3 8.7 0.1 3.9 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger Ogr_Delta PF04606.12 gi|433639454|ref|YP_007285214.1| - 0.15 12.1 3.1 1.3 9.1 1.1 2.5 2 1 0 2 2 2 0 Ogr/Delta-like zinc finger Lar_restr_allev PF14354.6 gi|433639454|ref|YP_007285214.1| - 0.32 11.4 7.9 2.4 8.6 0.5 2.5 2 1 0 2 2 2 0 Restriction alleviation protein Lar Prok-RING_1 PF14446.6 gi|433639454|ref|YP_007285214.1| - 0.38 10.7 8.4 0.57 10.2 1.0 3.0 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|433639454|ref|YP_007285214.1| - 0.43 10.6 8.9 3.1 7.9 0.3 2.9 2 1 1 3 3 3 0 zinc-ribbons DUF4428 PF14471.6 gi|433639454|ref|YP_007285214.1| - 0.77 9.7 6.7 0.42 10.6 1.5 2.8 3 1 0 3 3 3 0 Domain of unknown function (DUF4428) zf-UBP PF02148.19 gi|433639454|ref|YP_007285214.1| - 0.94 9.9 6.1 2.9 8.3 0.4 2.5 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein HypA PF01155.19 gi|433639454|ref|YP_007285214.1| - 1.2 9.2 8.7 8.9 6.4 0.6 3.0 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PHD PF00628.29 gi|433639454|ref|YP_007285214.1| - 2.2 8.2 11.1 19 5.3 0.1 3.6 3 1 0 3 3 3 0 PHD-finger Nudix_N_2 PF14803.6 gi|433639454|ref|YP_007285214.1| - 2.5 8.1 13.9 8.3 6.4 0.1 4.0 3 2 0 3 3 3 0 Nudix N-terminal zf-IS66 PF13005.7 gi|433639454|ref|YP_007285214.1| - 3.2 8.2 7.2 35 4.9 0.0 3.8 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 A2L_zn_ribbon PF08792.10 gi|433639454|ref|YP_007285214.1| - 3.3 7.5 13.3 16 5.3 0.0 4.1 3 1 1 4 4 4 0 A2L zinc ribbon domain Rubredoxin_2 PF18073.1 gi|433639454|ref|YP_007285214.1| - 3.3 7.5 15.8 24 4.8 0.2 4.0 3 1 1 4 4 4 0 Rubredoxin metal binding domain Ribosomal_L37ae PF01780.19 gi|433639454|ref|YP_007285214.1| - 3.9 7.6 5.1 1.8 8.7 0.2 2.5 1 1 1 2 2 2 0 Ribosomal L37ae protein family MFS_1 PF07690.16 gi|433639456|ref|YP_007285216.1| - 1.2e-50 172.4 54.3 1.1e-25 90.4 27.2 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|433639456|ref|YP_007285216.1| - 1.7e-06 27.2 26.0 0.0003 19.8 11.2 2.8 2 1 1 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|433639456|ref|YP_007285216.1| - 1.9e-06 27.0 14.9 0.00021 20.3 14.9 3.0 1 1 0 1 1 1 1 MFS_1 like family LacY_symp PF01306.19 gi|433639456|ref|YP_007285216.1| - 0.11 11.2 18.7 0.79 8.4 3.6 2.9 2 1 0 2 2 2 0 LacY proton/sugar symporter MukE PF04288.13 gi|433639457|ref|YP_007285217.1| - 0.047 12.6 0.1 0.66 8.9 0.0 2.0 2 0 0 2 2 2 0 MukE-like family Polysacc_deac_1 PF01522.21 gi|433639458|ref|YP_007285218.1| - 4.2e-11 42.8 0.0 6.7e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase TAT_signal PF10518.9 gi|433639458|ref|YP_007285218.1| - 0.11 12.4 2.6 0.28 11.1 2.6 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Putative_PNPOx PF01243.20 gi|433639459|ref|YP_007285219.1| - 9.7e-13 48.1 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|433639459|ref|YP_007285219.1| - 0.037 13.6 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like SRP9-21 PF05486.12 gi|433639459|ref|YP_007285219.1| - 0.15 12.4 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle 9 kDa protein (SRP9) Lactamase_B_2 PF12706.7 gi|433639462|ref|YP_007285222.1| - 9.6e-09 35.0 2.3 9.9e-08 31.7 0.2 2.8 2 1 1 3 3 3 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|433639462|ref|YP_007285222.1| - 1.5e-07 31.6 1.2 3.3e-07 30.5 1.2 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|433639462|ref|YP_007285222.1| - 0.00011 22.0 0.2 0.0055 16.6 0.0 3.0 3 0 0 3 3 3 1 Zn-dependent metallo-hydrolase RNA specificity domain DUF3267 PF11667.8 gi|433639464|ref|YP_007285224.1| - 2.4e-05 24.5 0.4 3.4e-05 24.1 0.4 1.2 1 0 0 1 1 1 1 Putative zincin peptidase DUF1098 PF06497.11 gi|433639465|ref|YP_007285225.1| - 0.089 13.3 0.1 0.15 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) Phosphodiest PF01663.22 gi|433639466|ref|YP_007285226.1| - 4e-43 148.4 0.0 3.5e-39 135.4 0.0 2.1 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 gi|433639466|ref|YP_007285226.1| - 0.014 14.8 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily Polysacc_synt PF01943.17 gi|433639467|ref|YP_007285227.1| - 4.7e-26 91.8 16.8 4.7e-26 91.8 16.8 2.3 1 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|433639467|ref|YP_007285227.1| - 1.8e-22 79.9 11.4 3.5e-22 79.0 11.4 1.5 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|433639467|ref|YP_007285227.1| - 3.9e-10 40.0 14.7 3.9e-10 40.0 14.7 3.5 2 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Methyltrn_RNA_2 PF04013.12 gi|433639468|ref|YP_007285228.1| - 2.9e-54 183.8 0.0 3.3e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Methyltrans_RNA PF04452.14 gi|433639468|ref|YP_007285228.1| - 0.064 12.6 0.0 0.097 12.0 0.0 1.3 1 0 0 1 1 1 0 RNA methyltransferase Auto_anti-p27 PF06677.12 gi|433639469|ref|YP_007285229.1| - 0.027 14.6 1.2 0.051 13.7 1.0 1.5 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C4_Topoisom PF01396.19 gi|433639469|ref|YP_007285229.1| - 0.039 13.7 1.2 0.054 13.3 1.2 1.3 1 1 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Prok-RING_1 PF14446.6 gi|433639469|ref|YP_007285229.1| - 0.23 11.4 3.5 0.5 10.3 3.5 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Abhydrolase_1 PF00561.20 gi|433639470|ref|YP_007285230.1| - 3.7e-19 69.4 0.1 3.6e-16 59.6 0.1 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|433639470|ref|YP_007285230.1| - 4e-17 63.6 13.1 4.8e-17 63.3 13.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|433639470|ref|YP_007285230.1| - 1.5e-13 50.5 0.1 5.8e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|433639470|ref|YP_007285230.1| - 4.7e-06 26.7 0.0 8.1e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein FSH1 PF03959.13 gi|433639470|ref|YP_007285230.1| - 0.00054 19.7 0.0 0.00071 19.3 0.0 1.3 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 gi|433639470|ref|YP_007285230.1| - 0.002 17.7 0.0 0.0083 15.6 0.0 2.0 2 0 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 gi|433639470|ref|YP_007285230.1| - 0.0036 17.1 0.0 1.1 9.1 0.0 2.2 2 0 0 2 2 2 2 Alpha/beta hydrolase family UPF0227 PF05728.12 gi|433639470|ref|YP_007285230.1| - 0.014 15.3 0.0 0.78 9.7 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) AMP-binding PF00501.28 gi|433639471|ref|YP_007285231.1| - 2.2e-27 95.7 0.0 7.8e-27 93.9 0.0 1.7 1 1 0 1 1 1 1 AMP-binding enzyme GATase PF00117.28 gi|433639472|ref|YP_007285232.1| - 4.2e-19 69.1 0.0 5.6e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|433639472|ref|YP_007285232.1| - 1.1e-07 31.9 0.6 3.9e-06 26.8 0.6 2.7 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|433639472|ref|YP_007285232.1| - 0.026 14.1 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain MaoC_dehydratas PF01575.19 gi|433639473|ref|YP_007285233.1| - 2.5e-15 56.1 0.0 3.1e-15 55.8 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|433639473|ref|YP_007285233.1| - 5.6e-06 26.5 0.3 1.1e-05 25.6 0.2 1.5 1 1 1 2 2 2 1 N-terminal half of MaoC dehydratase Acyl-CoA_dh_1 PF00441.24 gi|433639474|ref|YP_007285234.1| - 3.1e-48 163.8 4.7 4.4e-48 163.3 4.7 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|433639474|ref|YP_007285234.1| - 2.1e-24 86.3 8.5 4.5e-24 85.2 8.5 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433639474|ref|YP_007285234.1| - 6.4e-24 84.8 0.0 1.4e-23 83.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433639474|ref|YP_007285234.1| - 7.4e-18 64.6 0.2 2.2e-16 59.8 0.0 2.6 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, middle domain Ribonuc_L-PSP PF01042.21 gi|433639475|ref|YP_007285235.1| - 1.8e-17 63.5 0.0 2.2e-17 63.2 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP adh_short_C2 PF13561.6 gi|433639476|ref|YP_007285236.1| - 1.1e-69 234.5 3.0 1.4e-69 234.2 3.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|433639476|ref|YP_007285236.1| - 3.2e-55 186.6 1.3 3.8e-55 186.4 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|433639476|ref|YP_007285236.1| - 3.8e-15 56.3 1.1 4.9e-15 55.9 1.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|433639476|ref|YP_007285236.1| - 0.00056 19.4 0.3 0.0009 18.8 0.3 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|433639476|ref|YP_007285236.1| - 0.0095 15.1 0.5 0.019 14.1 0.5 1.5 1 0 0 1 1 1 1 RmlD substrate binding domain 3HCDH_N PF02737.18 gi|433639476|ref|YP_007285236.1| - 0.022 14.6 0.7 0.034 14.0 0.7 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433639476|ref|YP_007285236.1| - 0.044 13.2 0.1 0.07 12.5 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|433639476|ref|YP_007285236.1| - 0.089 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF4081 PF13312.6 gi|433639476|ref|YP_007285236.1| - 0.13 12.5 2.6 0.49 10.6 0.4 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4081) ECH_1 PF00378.20 gi|433639477|ref|YP_007285237.1| - 7.5e-46 156.5 0.0 9.3e-46 156.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|433639477|ref|YP_007285237.1| - 4.6e-27 95.4 0.0 9.3e-27 94.4 0.0 1.5 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF763 PF05559.11 gi|433639477|ref|YP_007285237.1| - 0.22 10.6 0.0 0.44 9.7 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF763) bPH_3 PF14470.6 gi|433639478|ref|YP_007285238.1| - 0.25 11.7 0.0 0.4 11.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial PH domain AMP-binding PF00501.28 gi|433639479|ref|YP_007285239.1| - 8.3e-95 317.9 0.0 9.9e-95 317.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433639479|ref|YP_007285239.1| - 1.1e-21 77.6 1.2 3.3e-21 76.1 0.7 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain PALP PF00291.25 gi|433639480|ref|YP_007285240.1| - 6.7e-41 140.6 2.0 7.7e-41 140.4 2.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Abhydrolase_3 PF07859.13 gi|433639481|ref|YP_007285241.1| - 2.7e-76 256.1 1.0 3.9e-76 255.6 1.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|433639481|ref|YP_007285241.1| - 5.4e-12 45.4 0.0 1.8e-11 43.6 0.0 1.7 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_6 PF12697.7 gi|433639481|ref|YP_007285241.1| - 4.8e-05 24.1 13.5 0.00011 22.9 13.5 1.6 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|433639481|ref|YP_007285241.1| - 0.00029 20.4 1.6 0.004 16.7 1.6 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|433639481|ref|YP_007285241.1| - 0.0022 17.6 0.0 1.2 8.6 0.1 2.3 2 0 0 2 2 2 2 Dienelactone hydrolase family Aminotran_5 PF00266.19 gi|433639482|ref|YP_007285242.1| - 5e-18 65.2 0.0 6.6e-18 64.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|433639482|ref|YP_007285242.1| - 0.0038 15.8 0.0 0.0055 15.3 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme IDO PF01231.18 gi|433639483|ref|YP_007285243.1| - 4e-77 259.8 0.0 4.4e-73 246.5 0.0 2.1 1 1 1 2 2 2 2 Indoleamine 2,3-dioxygenase Bac_luciferase PF00296.20 gi|433639484|ref|YP_007285244.1| - 8.5e-34 117.4 1.9 1.4e-33 116.7 1.9 1.3 1 1 0 1 1 1 1 Luciferase-like monooxygenase Oxidored_FMN PF00724.20 gi|433639485|ref|YP_007285245.1| - 2.1e-42 145.6 0.0 2.9e-42 145.2 0.0 1.2 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family FAD_binding_3 PF01494.19 gi|433639485|ref|YP_007285245.1| - 1.4e-16 60.7 0.2 6.5e-14 51.9 0.2 2.2 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 gi|433639485|ref|YP_007285245.1| - 0.00057 19.0 0.0 0.00092 18.4 0.0 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|433639485|ref|YP_007285245.1| - 0.0061 15.8 0.0 0.0099 15.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|433639485|ref|YP_007285245.1| - 0.028 14.7 0.0 0.17 12.2 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|433639485|ref|YP_007285245.1| - 0.06 12.6 0.0 0.095 11.9 0.0 1.3 1 0 0 1 1 1 0 Thi4 family NAD_binding_9 PF13454.6 gi|433639485|ref|YP_007285245.1| - 0.12 12.4 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|433639485|ref|YP_007285245.1| - 0.17 10.6 0.0 0.36 9.5 0.0 1.5 2 0 0 2 2 2 0 HI0933-like protein Acyl-CoA_dh_1 PF00441.24 gi|433639486|ref|YP_007285246.1| - 2.6e-33 115.3 2.9 4.2e-33 114.7 2.9 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|433639486|ref|YP_007285246.1| - 8.5e-26 90.8 0.0 2.9e-25 89.1 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|433639486|ref|YP_007285246.1| - 3.3e-24 84.9 0.0 6.4e-24 84.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|433639486|ref|YP_007285246.1| - 2.2e-10 40.9 2.9 4.2e-10 40.0 2.9 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 gi|433639486|ref|YP_007285246.1| - 0.0013 18.5 0.1 0.0047 16.6 0.1 1.9 1 1 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HIT PF01230.23 gi|433639487|ref|YP_007285247.1| - 6.7e-27 94.1 0.2 8e-27 93.9 0.2 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|433639487|ref|YP_007285247.1| - 7.1e-13 49.0 0.0 9.4e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|433639487|ref|YP_007285247.1| - 0.00023 21.0 0.1 0.00037 20.3 0.1 1.3 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 MFS_1 PF07690.16 gi|433639488|ref|YP_007285248.1| - 1.4e-49 168.9 52.9 4.7e-37 127.7 22.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|433639488|ref|YP_007285248.1| - 1.5e-07 31.1 31.0 2.1e-07 30.6 31.0 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF1129 PF06570.11 gi|433639488|ref|YP_007285248.1| - 0.27 10.7 3.2 4.3 6.8 0.0 3.2 2 2 0 2 2 2 0 Protein of unknown function (DUF1129) Fer4 PF00037.27 gi|433639489|ref|YP_007285249.1| - 7.3e-11 41.4 12.6 3.6e-07 29.7 3.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|433639489|ref|YP_007285249.1| - 6e-10 39.6 1.5 6.5e-05 23.4 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|433639489|ref|YP_007285249.1| - 5.1e-08 32.9 5.0 7.7e-08 32.4 5.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|433639489|ref|YP_007285249.1| - 7.6e-07 29.2 17.6 3.1e-05 24.0 7.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|433639489|ref|YP_007285249.1| - 3e-06 27.6 1.3 0.011 16.1 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|433639489|ref|YP_007285249.1| - 4.1e-06 26.8 10.6 2.8e-05 24.2 10.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|433639489|ref|YP_007285249.1| - 4.7e-06 26.4 13.4 6.4e-05 22.9 5.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|433639489|ref|YP_007285249.1| - 9.8e-06 26.4 5.1 0.00032 21.6 1.3 2.3 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|433639489|ref|YP_007285249.1| - 2.2e-05 24.9 1.3 0.032 14.8 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433639489|ref|YP_007285249.1| - 0.00033 20.6 10.2 0.0094 16.0 3.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|433639489|ref|YP_007285249.1| - 0.00054 20.1 3.3 0.00054 20.1 3.3 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|433639489|ref|YP_007285249.1| - 0.00071 19.9 1.6 0.00071 19.9 1.6 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_3 PF12798.7 gi|433639489|ref|YP_007285249.1| - 0.0023 18.7 4.1 0.0023 18.7 4.1 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|433639489|ref|YP_007285249.1| - 0.0076 16.8 13.5 0.12 12.9 13.5 2.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 gi|433639489|ref|YP_007285249.1| - 0.0083 16.2 0.3 0.0099 16.0 0.3 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S DUF5611 PF18446.1 gi|433639490|ref|YP_007285250.1| - 4.9e-30 104.4 0.0 5.6e-30 104.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) zinc_ribbon_9 PF14369.6 gi|433639491|ref|YP_007285251.1| - 0.074 13.3 3.4 0.16 12.2 0.9 2.7 2 1 1 3 3 3 0 zinc-ribbon HypA PF01155.19 gi|433639491|ref|YP_007285251.1| - 0.089 12.8 1.1 1.1 9.3 0.1 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin PF00301.20 gi|433639491|ref|YP_007285251.1| - 0.11 12.5 2.8 0.32 11.1 0.2 2.6 2 0 0 2 2 2 0 Rubredoxin DUF2719 PF10891.8 gi|433639491|ref|YP_007285251.1| - 0.22 11.4 0.0 0.57 10.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2719) zf_UBZ PF18439.1 gi|433639491|ref|YP_007285251.1| - 0.41 10.3 5.7 26 4.5 0.1 3.4 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-CCHC_5 PF14787.6 gi|433639491|ref|YP_007285251.1| - 1.8 8.3 7.2 2.7 7.8 0.3 3.1 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger HTH_20 PF12840.7 gi|433639492|ref|YP_007285252.1| - 0.0015 18.5 0.1 0.0022 18.0 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DBD_HTH PF18430.1 gi|433639492|ref|YP_007285252.1| - 0.015 15.0 1.5 0.023 14.5 0.4 1.8 2 0 0 2 2 2 0 Putative DNA-binding domain GCV_T PF01571.21 gi|433639493|ref|YP_007285253.1| - 3.9e-41 141.1 0.0 5.2e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|433639493|ref|YP_007285253.1| - 7.6e-15 54.6 0.1 3.5e-14 52.5 0.1 2.2 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain DUF2070 PF09843.9 gi|433639494|ref|YP_007285254.1| - 2.4 6.3 8.2 2.9 6.1 8.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FAD_binding_3 PF01494.19 gi|433639495|ref|YP_007285255.1| - 9.1e-14 51.4 3.2 2.9e-09 36.6 0.0 3.0 3 0 0 3 3 3 3 FAD binding domain DAO PF01266.24 gi|433639495|ref|YP_007285255.1| - 2.6e-06 27.3 3.7 0.0039 16.8 0.1 2.7 2 1 0 3 3 3 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|433639495|ref|YP_007285255.1| - 4.5e-06 26.0 0.5 3.6e-05 23.0 0.5 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 gi|433639495|ref|YP_007285255.1| - 0.00022 20.6 3.6 0.002 17.4 0.4 2.5 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433639495|ref|YP_007285255.1| - 0.0035 16.1 0.1 0.025 13.3 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.7 gi|433639495|ref|YP_007285255.1| - 0.0084 15.5 0.3 0.012 15.0 0.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|433639495|ref|YP_007285255.1| - 0.019 14.3 0.4 0.077 12.2 0.3 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|433639495|ref|YP_007285255.1| - 0.039 14.2 4.3 0.13 12.5 1.0 3.4 4 1 0 4 4 4 0 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|433639495|ref|YP_007285255.1| - 0.048 12.5 0.7 0.16 10.8 0.1 1.9 2 0 0 2 2 2 0 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|433639495|ref|YP_007285255.1| - 0.17 10.9 3.3 0.14 11.2 1.1 1.9 2 0 0 2 2 2 0 FAD binding domain 2-Hacid_dh_C PF02826.19 gi|433639495|ref|YP_007285255.1| - 0.21 10.9 0.2 1 8.7 0.1 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|433639495|ref|YP_007285255.1| - 0.28 11.8 0.9 3 8.5 0.1 2.2 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Cupin_2 PF07883.11 gi|433639496|ref|YP_007285256.1| - 2.4e-09 36.8 0.2 3.4e-09 36.3 0.2 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|433639496|ref|YP_007285256.1| - 8.7e-06 25.4 0.2 1.8e-05 24.4 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding_2 PF14525.6 gi|433639496|ref|YP_007285256.1| - 1.6e-05 24.7 0.1 2e-05 24.3 0.1 1.0 1 0 0 1 1 1 1 AraC-binding-like domain AraC_binding PF02311.19 gi|433639496|ref|YP_007285256.1| - 0.0055 16.6 0.0 0.0065 16.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Lyx_isomer PF07385.12 gi|433639496|ref|YP_007285256.1| - 0.052 12.8 0.0 0.064 12.5 0.0 1.1 1 0 0 1 1 1 0 D-lyxose isomerase DMSP_lyase PF16867.5 gi|433639496|ref|YP_007285256.1| - 0.095 12.3 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase EutQ PF06249.12 gi|433639496|ref|YP_007285256.1| - 0.14 11.9 0.1 0.15 11.8 0.1 1.3 1 1 0 1 1 1 0 Ethanolamine utilisation protein EutQ 4HBT PF03061.22 gi|433639497|ref|YP_007285257.1| - 1.8e-11 44.2 0.0 2.7e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|433639497|ref|YP_007285257.1| - 0.017 15.4 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF4442 PF14539.6 gi|433639497|ref|YP_007285257.1| - 0.02 15.0 0.0 0.04 14.0 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4442) DUF359 PF04019.12 gi|433639498|ref|YP_007285258.1| - 4.3e-40 136.3 0.3 6e-40 135.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Apocytochr_F_N PF16639.5 gi|433639498|ref|YP_007285258.1| - 0.11 12.8 0.2 0.16 12.3 0.2 1.2 1 0 0 1 1 1 0 Apocytochrome F, N-terminal Spt4 PF06093.13 gi|433639499|ref|YP_007285259.1| - 1.4e-13 50.7 0.3 1.7e-13 50.5 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger zf-RanBP PF00641.18 gi|433639499|ref|YP_007285259.1| - 0.074 12.4 3.5 0.1 11.9 3.5 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others SHS2_Rpb7-N PF03876.17 gi|433639500|ref|YP_007285260.1| - 1.6e-15 57.2 0.1 2.6e-15 56.5 0.1 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|433639500|ref|YP_007285260.1| - 6.2e-12 45.7 0.2 1.4e-11 44.6 0.2 1.6 1 0 0 1 1 1 1 S1 RNA binding domain PIN_9 PF18477.1 gi|433639501|ref|YP_007285261.1| - 1.9e-34 118.5 0.3 6.8e-25 87.6 0.0 2.0 1 1 1 2 2 2 2 PIN like domain DUF188 PF02639.14 gi|433639501|ref|YP_007285261.1| - 4.3e-06 26.4 0.0 6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 GTP_EFTU PF00009.27 gi|433639502|ref|YP_007285262.1| - 5.7e-31 107.6 0.9 3.4e-30 105.0 0.9 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|433639502|ref|YP_007285262.1| - 1.8e-30 105.0 0.0 3.6e-30 104.0 0.0 1.5 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|433639502|ref|YP_007285262.1| - 9.6e-06 25.9 1.8 1.6e-05 25.2 0.5 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|433639502|ref|YP_007285262.1| - 0.00011 22.2 0.0 0.00022 21.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|433639502|ref|YP_007285262.1| - 0.00025 21.0 0.1 0.016 15.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase PduV-EutP PF10662.9 gi|433639502|ref|YP_007285262.1| - 0.036 13.8 0.1 0.27 11.0 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|433639502|ref|YP_007285262.1| - 0.053 13.0 0.3 5 6.6 0.0 2.4 2 1 0 2 2 2 0 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|433639502|ref|YP_007285262.1| - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 gi|433639502|ref|YP_007285262.1| - 0.2 11.1 0.0 10 5.5 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit HTH_20 PF12840.7 gi|433639503|ref|YP_007285263.1| - 7.2e-09 35.6 0.2 2.6e-08 33.8 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Zn-ribbon_8 PF09723.10 gi|433639503|ref|YP_007285263.1| - 2.3 8.4 15.6 6.8 6.9 0.9 4.4 4 0 0 4 4 4 0 Zinc ribbon domain DUF883 PF05957.13 gi|433639505|ref|YP_007285265.1| - 0.063 13.9 2.3 0.076 13.6 2.3 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) tRNA_anti-codon PF01336.25 gi|433639507|ref|YP_007285267.1| - 0.026 14.5 0.1 0.087 12.8 0.1 1.9 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Ribo_biogen_C PF04034.13 gi|433639509|ref|YP_007285269.1| - 6e-44 148.8 0.0 7.2e-44 148.6 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|433639509|ref|YP_007285269.1| - 1.7e-08 34.1 0.0 2.7e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Rieske PF00355.26 gi|433639510|ref|YP_007285270.1| - 1.5e-11 44.1 0.0 3e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|433639510|ref|YP_007285270.1| - 9.7e-11 41.5 0.0 1.7e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain PALP PF00291.25 gi|433639511|ref|YP_007285271.1| - 1.2e-82 277.6 12.0 1.8e-82 277.1 12.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.6 gi|433639511|ref|YP_007285271.1| - 2.9e-05 24.6 0.0 8.2e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|433639511|ref|YP_007285271.1| - 0.0024 17.6 1.2 0.0083 15.9 0.1 2.4 2 0 0 2 2 2 1 ACT domain GGACT PF06094.12 gi|433639512|ref|YP_007285272.1| - 4.6e-16 59.5 0.0 5.3e-16 59.3 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 gi|433639512|ref|YP_007285272.1| - 2.4e-05 24.6 0.0 3.5e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 AIG2-like family MatE PF01554.18 gi|433639513|ref|YP_007285273.1| - 3.3e-36 124.4 25.3 8.4e-20 71.0 9.3 2.6 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|433639513|ref|YP_007285273.1| - 0.0089 16.1 8.8 0.0089 16.1 8.8 4.4 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain WCOR413 PF05562.11 gi|433639515|ref|YP_007285275.1| - 0.0024 17.9 0.2 0.0026 17.7 0.2 1.0 1 0 0 1 1 1 1 Cold acclimation protein WCOR413 Citrate_synt PF00285.21 gi|433639516|ref|YP_007285276.1| - 6.1e-130 433.5 0.0 7e-130 433.3 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain SpoIIM PF01944.17 gi|433639517|ref|YP_007285277.1| - 1.4e-28 99.9 15.3 1.4e-28 99.9 15.3 3.4 2 1 0 2 2 2 1 Stage II sporulation protein M DUF4212 PF13937.6 gi|433639517|ref|YP_007285277.1| - 1.3 9.4 6.6 0.89 10.0 1.3 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4212) MFS_1 PF07690.16 gi|433639518|ref|YP_007285278.1| - 5.9e-10 38.6 66.1 1.5e-05 24.1 23.3 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433639518|ref|YP_007285278.1| - 0.3 9.9 11.1 0.58 8.9 1.7 2.4 2 0 0 2 2 2 0 MFS_1 like family AstE_AspA PF04952.14 gi|433639519|ref|YP_007285279.1| - 1.5e-58 198.2 0.0 1.8e-58 198.0 0.0 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family DUF2118 PF09891.9 gi|433639519|ref|YP_007285279.1| - 0.044 13.7 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) PALP PF00291.25 gi|433639520|ref|YP_007285280.1| - 4.3e-55 187.2 0.5 6.5e-55 186.6 0.5 1.3 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme A2L_zn_ribbon PF08792.10 gi|433639520|ref|YP_007285280.1| - 0.18 11.5 0.2 1.6 8.5 0.1 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain tRNA-synt_1d PF00750.19 gi|433639521|ref|YP_007285281.1| - 7.1e-45 153.5 0.0 9.3e-45 153.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|433639521|ref|YP_007285281.1| - 5e-30 104.1 0.0 2.1e-29 102.1 0.0 2.1 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|433639521|ref|YP_007285281.1| - 2.3e-10 40.9 0.0 5.8e-10 39.6 0.0 1.7 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.18 gi|433639521|ref|YP_007285281.1| - 0.005 15.8 0.0 0.23 10.4 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (K) PrmC_N PF17827.1 gi|433639521|ref|YP_007285281.1| - 0.055 14.1 0.2 0.56 10.8 0.1 2.9 2 1 0 2 2 2 0 PrmC N-terminal domain tRNA-synt_1e PF01406.19 gi|433639521|ref|YP_007285281.1| - 0.14 11.5 0.0 0.32 10.3 0.0 1.5 1 1 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain HTH_20 PF12840.7 gi|433639522|ref|YP_007285282.1| - 0.012 15.7 1.2 0.037 14.1 1.2 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain ParA PF10609.9 gi|433639523|ref|YP_007285283.1| - 3.8e-23 82.2 4.3 6.3e-12 45.5 0.6 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|433639523|ref|YP_007285283.1| - 1.7e-19 70.1 0.1 2.5e-19 69.6 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|433639523|ref|YP_007285283.1| - 2.9e-19 69.7 0.0 4.4e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.18 gi|433639523|ref|YP_007285283.1| - 5.9e-12 45.6 0.1 1.5e-10 41.0 0.1 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|433639523|ref|YP_007285283.1| - 1.2e-10 41.3 0.1 1.1e-09 38.1 0.0 1.9 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|433639523|ref|YP_007285283.1| - 3.2e-09 36.5 0.7 7.6e-09 35.2 0.7 1.6 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|433639523|ref|YP_007285283.1| - 2.5e-06 26.9 0.6 2.4e-05 23.7 1.0 2.0 2 0 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.11 gi|433639523|ref|YP_007285283.1| - 0.00015 21.2 0.3 0.00027 20.3 0.3 1.3 1 0 0 1 1 1 1 VirC1 protein CLP1_P PF16575.5 gi|433639523|ref|YP_007285283.1| - 0.00016 21.5 0.1 0.00024 21.0 0.1 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_26 PF13500.6 gi|433639523|ref|YP_007285283.1| - 0.00048 20.0 4.0 0.004 17.0 0.0 2.4 3 0 0 3 3 3 1 AAA domain MeaB PF03308.16 gi|433639523|ref|YP_007285283.1| - 0.0055 15.7 3.3 0.015 14.3 3.3 1.8 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|433639523|ref|YP_007285283.1| - 0.038 13.6 1.6 0.064 12.9 1.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_25 PF13481.6 gi|433639523|ref|YP_007285283.1| - 0.038 13.6 0.3 0.092 12.3 0.3 1.6 1 0 0 1 1 1 0 AAA domain FTHFS PF01268.19 gi|433639523|ref|YP_007285283.1| - 0.039 12.2 0.6 0.057 11.6 0.6 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase AAA_24 PF13479.6 gi|433639523|ref|YP_007285283.1| - 0.078 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433639523|ref|YP_007285283.1| - 0.083 12.6 1.3 0.096 12.4 0.1 1.8 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 gi|433639523|ref|YP_007285283.1| - 0.27 10.1 0.2 0.37 9.7 0.2 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain eRF1_2 PF03464.15 gi|433639524|ref|YP_007285284.1| - 4.1e-45 153.4 0.0 7.4e-45 152.5 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|433639524|ref|YP_007285284.1| - 1.5e-27 96.4 0.2 6.5e-27 94.3 0.2 2.2 1 1 0 1 1 1 1 eRF1 domain 3 acVLRF1 PF18859.1 gi|433639524|ref|YP_007285284.1| - 1.5e-17 64.1 0.1 4.9e-17 62.4 0.1 1.9 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|433639524|ref|YP_007285284.1| - 3.3e-16 59.8 0.0 9.6e-16 58.3 0.0 1.8 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|433639524|ref|YP_007285284.1| - 5e-11 42.7 0.0 7.8e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 1 TF_Zn_Ribbon PF08271.12 gi|433639524|ref|YP_007285284.1| - 4.3e-05 22.9 5.2 0.00012 21.5 5.2 1.8 1 0 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|433639524|ref|YP_007285284.1| - 0.0012 18.7 3.4 0.0028 17.6 3.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain baeRF_family12 PF18856.1 gi|433639524|ref|YP_007285284.1| - 0.0034 18.0 0.0 0.0095 16.5 0.0 1.8 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 DZR PF12773.7 gi|433639524|ref|YP_007285284.1| - 0.026 14.5 0.7 0.053 13.5 0.7 1.4 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433639524|ref|YP_007285284.1| - 0.077 13.1 2.6 0.12 12.5 1.3 2.0 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|433639524|ref|YP_007285284.1| - 0.095 12.5 2.2 1.9 8.3 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DUF2239 PF09998.9 gi|433639524|ref|YP_007285284.1| - 0.12 12.1 0.2 0.35 10.7 0.2 1.8 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) zf_UBZ PF18439.1 gi|433639524|ref|YP_007285284.1| - 0.18 11.4 3.2 2 8.1 0.2 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-IS66 PF13005.7 gi|433639524|ref|YP_007285284.1| - 0.72 10.3 3.5 35 4.9 0.1 3.2 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 zf-Mss51 PF13824.6 gi|433639524|ref|YP_007285284.1| - 0.91 9.7 3.8 7.8 6.7 0.2 2.7 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ribbon_3 PF13248.6 gi|433639524|ref|YP_007285284.1| - 2 7.9 4.1 6.6 6.3 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain BAT PF15915.5 gi|433639525|ref|YP_007285285.1| - 2.5e-29 102.2 0.1 2.5e-29 102.2 0.1 3.3 3 1 1 4 4 4 1 GAF and HTH_10 associated domain GAF_2 PF13185.6 gi|433639525|ref|YP_007285285.1| - 3.9e-19 69.3 0.1 1.1e-18 67.9 0.1 1.8 1 0 0 1 1 1 1 GAF domain HTH_10 PF04967.12 gi|433639525|ref|YP_007285285.1| - 8.3e-19 67.1 0.0 2.1e-18 65.9 0.0 1.7 1 0 0 1 1 1 1 HTH DNA binding domain PAS_9 PF13426.7 gi|433639525|ref|YP_007285285.1| - 4.1e-11 43.1 0.0 1.6e-09 37.9 0.0 3.1 4 1 0 4 4 3 1 PAS domain GAF PF01590.26 gi|433639525|ref|YP_007285285.1| - 1.7e-09 38.4 0.0 4e-09 37.2 0.0 1.7 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|433639525|ref|YP_007285285.1| - 1.4e-08 35.0 0.3 6e-08 32.9 0.3 2.2 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 gi|433639525|ref|YP_007285285.1| - 7e-08 32.5 0.0 1.6e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|433639525|ref|YP_007285285.1| - 8.1e-06 25.7 0.0 2.6e-05 24.1 0.0 1.9 1 0 0 1 1 1 1 PAS domain HTH_20 PF12840.7 gi|433639525|ref|YP_007285285.1| - 2.6e-05 24.2 0.0 0.015 15.3 0.0 2.9 2 0 0 2 2 2 1 Helix-turn-helix domain GAF_3 PF13492.6 gi|433639525|ref|YP_007285285.1| - 8.5e-05 22.9 0.0 0.00017 21.9 0.0 1.6 1 0 0 1 1 1 1 GAF domain HTH_24 PF13412.6 gi|433639525|ref|YP_007285285.1| - 0.00018 21.0 0.0 0.65 9.6 0.0 2.9 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433639525|ref|YP_007285285.1| - 0.0021 17.9 0.0 2.8 7.9 0.0 2.9 3 0 0 3 3 3 2 MarR family PQQ_2 PF13360.6 gi|433639525|ref|YP_007285285.1| - 0.0055 16.3 0.4 0.011 15.3 0.4 1.5 1 0 0 1 1 1 1 PQQ-like domain Autoind_bind PF03472.15 gi|433639525|ref|YP_007285285.1| - 0.056 12.9 0.4 6.3 6.3 0.0 2.6 2 1 0 2 2 2 0 Autoinducer binding domain PAS_3 PF08447.12 gi|433639525|ref|YP_007285285.1| - 0.1 12.9 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 PAS fold LexA_DNA_bind PF01726.16 gi|433639525|ref|YP_007285285.1| - 0.15 11.8 0.0 1.5 8.6 0.0 2.6 3 0 0 3 3 3 0 LexA DNA binding domain ATP-synt_D PF01813.17 gi|433639527|ref|YP_007285287.1| - 1.2e-53 181.8 8.7 1.5e-53 181.6 8.7 1.1 1 0 0 1 1 1 1 ATP synthase subunit D zinc_ribbon_13 PF09855.9 gi|433639528|ref|YP_007285288.1| - 8.9e-28 96.2 0.5 9.9e-28 96.1 0.5 1.0 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-ribbon_3 PF13248.6 gi|433639528|ref|YP_007285288.1| - 0.00017 20.9 1.6 0.09 12.2 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|433639528|ref|YP_007285288.1| - 0.00095 19.5 0.2 0.0013 19.0 0.2 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|433639528|ref|YP_007285288.1| - 0.0032 16.9 1.1 0.25 10.9 0.1 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|433639528|ref|YP_007285288.1| - 0.0034 17.0 3.5 0.56 10.0 0.5 2.2 2 0 0 2 2 2 2 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|433639528|ref|YP_007285288.1| - 0.0074 16.2 3.5 0.78 9.8 0.6 2.1 1 1 1 2 2 2 2 Transposase zinc-ribbon domain DUF2387 PF09526.10 gi|433639528|ref|YP_007285288.1| - 0.01 16.0 0.7 0.19 11.9 0.6 2.0 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) Elf1 PF05129.13 gi|433639528|ref|YP_007285288.1| - 0.015 15.3 0.4 0.027 14.5 0.4 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like DZR PF12773.7 gi|433639528|ref|YP_007285288.1| - 0.019 15.0 0.4 0.028 14.4 0.4 1.3 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433639528|ref|YP_007285288.1| - 0.02 15.0 0.6 1.6 8.9 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|433639528|ref|YP_007285288.1| - 0.021 14.5 1.2 3.8 7.3 0.0 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain CpXC PF14353.6 gi|433639528|ref|YP_007285288.1| - 0.028 14.4 1.4 0.091 12.8 1.4 1.7 1 1 0 1 1 1 0 CpXC protein Zn_Tnp_IS91 PF14319.6 gi|433639528|ref|YP_007285288.1| - 0.037 14.1 0.8 1.8 8.7 0.2 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain zf-IS66 PF13005.7 gi|433639528|ref|YP_007285288.1| - 0.069 13.6 2.2 1.3 9.5 2.8 2.1 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 OrfB_Zn_ribbon PF07282.11 gi|433639528|ref|YP_007285288.1| - 0.091 12.7 2.5 0.72 9.8 2.5 2.0 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DUF2225 PF09986.9 gi|433639528|ref|YP_007285288.1| - 0.13 11.9 1.1 0.6 9.8 1.1 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) zf-C2H2_3 PF13878.6 gi|433639528|ref|YP_007285288.1| - 0.16 11.8 2.5 1.7 8.6 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DNA_RNApol_7kD PF03604.13 gi|433639528|ref|YP_007285288.1| - 0.17 11.6 3.9 0.65 9.7 0.0 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-HYPF PF07503.12 gi|433639528|ref|YP_007285288.1| - 0.19 11.5 0.3 0.19 11.5 0.3 2.3 2 1 0 2 2 2 0 HypF finger zinc_ribbon_4 PF13717.6 gi|433639528|ref|YP_007285288.1| - 0.42 10.6 3.9 15 5.6 1.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|433639528|ref|YP_007285288.1| - 0.43 10.5 6.7 2 8.3 0.7 2.4 2 1 1 3 3 3 0 Transcription factor S-II (TFIIS) UPF0547 PF10571.9 gi|433639528|ref|YP_007285288.1| - 1.2 9.3 6.0 12 6.1 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 ATP-synt_ab PF00006.25 gi|433639530|ref|YP_007285290.1| - 3e-64 216.6 0.0 4.2e-64 216.1 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|433639530|ref|YP_007285290.1| - 6.4e-15 55.4 1.3 1.7e-14 54.1 1.3 1.8 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|433639530|ref|YP_007285290.1| - 0.00028 21.0 0.4 0.001 19.2 0.4 2.1 1 0 0 1 1 1 1 HAS barrel domain ATP-synt_ab PF00006.25 gi|433639531|ref|YP_007285291.1| - 1.3e-91 306.0 0.0 1.8e-91 305.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|433639531|ref|YP_007285291.1| - 1.5e-39 134.6 0.1 2.6e-39 133.8 0.1 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|433639531|ref|YP_007285291.1| - 1.3e-11 44.8 4.5 1.3e-11 44.8 4.5 2.4 3 0 0 3 3 3 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|433639531|ref|YP_007285291.1| - 0.032 14.5 0.0 0.08 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain QRPTase_N PF02749.16 gi|433639531|ref|YP_007285291.1| - 0.18 11.9 0.2 27 4.9 0.0 3.0 3 0 0 3 3 3 0 Quinolinate phosphoribosyl transferase, N-terminal domain ATP-synt_F PF01990.17 gi|433639532|ref|YP_007285292.1| - 2.9e-15 56.4 0.1 3.3e-15 56.2 0.1 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.16 gi|433639533|ref|YP_007285293.1| - 1.8e-76 257.9 5.5 2e-76 257.7 5.5 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.18 gi|433639534|ref|YP_007285294.1| - 4.7e-39 133.9 8.2 5.4e-39 133.7 8.2 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit V-ATPase_G PF03179.15 gi|433639534|ref|YP_007285294.1| - 0.00071 20.1 11.7 0.00085 19.8 11.0 1.5 1 1 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|433639534|ref|YP_007285294.1| - 0.0081 16.3 22.5 0.013 15.6 21.9 1.6 1 1 1 2 2 2 1 ATP synthase B/B' CF(0) V-ATPase_G_2 PF16999.5 gi|433639534|ref|YP_007285294.1| - 0.026 15.0 20.9 0.046 14.1 20.9 1.4 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit HrpE PF06188.12 gi|433639534|ref|YP_007285294.1| - 0.04 13.8 9.7 0.06 13.2 9.7 1.2 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E V_ATPase_I PF01496.19 gi|433639534|ref|YP_007285294.1| - 0.12 10.3 0.5 0.13 10.2 0.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DivIVA PF05103.13 gi|433639534|ref|YP_007285294.1| - 0.13 12.4 13.2 0.17 12.0 11.2 2.1 1 1 1 2 2 2 0 DivIVA protein DUF3552 PF12072.8 gi|433639534|ref|YP_007285294.1| - 0.2 11.1 19.2 0.88 9.0 19.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) Apolipoprotein PF01442.18 gi|433639534|ref|YP_007285294.1| - 0.53 10.1 21.6 1.9 8.3 21.6 1.8 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain OmpH PF03938.14 gi|433639534|ref|YP_007285294.1| - 0.55 10.6 9.8 0.82 10.0 9.8 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) YtxH PF12732.7 gi|433639534|ref|YP_007285294.1| - 2.4 8.8 9.3 13 6.4 8.6 2.4 2 1 0 2 2 1 0 YtxH-like protein DUF883 PF05957.13 gi|433639534|ref|YP_007285294.1| - 3.8 8.2 17.3 4 8.1 6.3 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Atg14 PF10186.9 gi|433639534|ref|YP_007285294.1| - 9.5 5.2 7.2 12 4.9 7.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ATP-synt_C PF00137.21 gi|433639535|ref|YP_007285295.1| - 1.8e-09 37.8 9.2 2.3e-09 37.4 9.2 1.2 1 0 0 1 1 1 1 ATP synthase subunit C V_ATPase_I PF01496.19 gi|433639536|ref|YP_007285296.1| - 7.5e-20 70.5 11.0 1.4e-08 33.2 0.2 4.7 5 0 0 5 5 5 3 V-type ATPase 116kDa subunit family DUF4140 PF13600.6 gi|433639536|ref|YP_007285296.1| - 0.032 14.7 4.6 0.52 10.8 0.8 2.5 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Spc24 PF08286.11 gi|433639536|ref|YP_007285296.1| - 0.19 12.0 0.0 7 6.9 0.0 2.4 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Cep57_CLD_2 PF14197.6 gi|433639536|ref|YP_007285296.1| - 0.27 11.3 3.5 6.6 6.9 0.4 2.4 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 V-ATPase_G PF03179.15 gi|433639537|ref|YP_007285297.1| - 0.0005 20.6 18.1 0.02 15.4 5.5 2.2 1 1 1 2 2 2 2 Vacuolar (H+)-ATPase G subunit DUF883 PF05957.13 gi|433639537|ref|YP_007285297.1| - 0.0073 16.9 14.6 0.25 12.0 6.8 2.1 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF883) V-ATPase_G_2 PF16999.5 gi|433639537|ref|YP_007285297.1| - 0.011 16.2 23.7 0.018 15.5 23.7 1.5 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DivIVA PF05103.13 gi|433639537|ref|YP_007285297.1| - 0.011 15.8 13.4 0.31 11.1 6.7 2.1 1 1 1 2 2 2 0 DivIVA protein HrpE PF06188.12 gi|433639537|ref|YP_007285297.1| - 0.012 15.4 7.2 0.016 15.1 7.2 1.2 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E ATP-synt_B PF00430.18 gi|433639537|ref|YP_007285297.1| - 0.016 15.3 23.3 0.031 14.4 23.2 1.6 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) PIN_8 PF18476.1 gi|433639537|ref|YP_007285297.1| - 0.04 13.8 3.3 0.044 13.6 3.3 1.1 1 0 0 1 1 1 0 PIN like domain DUF885 PF05960.11 gi|433639537|ref|YP_007285297.1| - 0.07 12.8 6.8 0.073 12.7 6.8 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3435 PF11917.8 gi|433639537|ref|YP_007285297.1| - 0.12 11.3 4.6 0.12 11.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) DUF3552 PF12072.8 gi|433639537|ref|YP_007285297.1| - 0.13 11.7 21.9 0.047 13.1 10.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Borrelia_P83 PF05262.11 gi|433639537|ref|YP_007285297.1| - 0.16 10.5 8.2 0.18 10.3 8.2 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein LUC7 PF03194.15 gi|433639537|ref|YP_007285297.1| - 0.38 10.4 8.0 0.44 10.2 8.0 1.0 1 0 0 1 1 1 0 LUC7 N_terminus DUF4407 PF14362.6 gi|433639537|ref|YP_007285297.1| - 0.39 10.0 7.9 0.46 9.8 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) vATP-synt_E PF01991.18 gi|433639537|ref|YP_007285297.1| - 0.46 9.9 19.2 0.07 12.5 12.8 2.1 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit Remorin_C PF03763.13 gi|433639537|ref|YP_007285297.1| - 0.96 9.4 14.3 3.9 7.4 9.6 2.0 1 1 1 2 2 2 0 Remorin, C-terminal region FUSC PF04632.12 gi|433639537|ref|YP_007285297.1| - 1.4 7.3 7.0 1.7 7.1 7.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Rep_4 PF05797.11 gi|433639537|ref|YP_007285297.1| - 1.8 7.6 8.9 2.1 7.4 8.9 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) DUF2203 PF09969.9 gi|433639537|ref|YP_007285297.1| - 2.3 9.0 8.9 10 6.9 8.8 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) YtxH PF12732.7 gi|433639537|ref|YP_007285297.1| - 3.7 8.1 7.8 47 4.6 7.8 2.2 1 1 0 1 1 1 0 YtxH-like protein Phage_Mu_Gam PF07352.12 gi|433639537|ref|YP_007285297.1| - 4.2 7.3 10.9 1.7 8.5 1.2 2.3 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein Methyltransf_11 PF08241.12 gi|433639538|ref|YP_007285298.1| - 1.4e-25 89.8 0.0 2.6e-25 88.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433639538|ref|YP_007285298.1| - 3.6e-23 82.1 0.0 5.8e-23 81.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433639538|ref|YP_007285298.1| - 3.1e-15 56.3 0.0 4.1e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|433639538|ref|YP_007285298.1| - 6.2e-15 55.7 0.0 9.3e-15 55.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|433639538|ref|YP_007285298.1| - 1.2e-14 54.3 0.0 4e-12 46.0 0.0 2.1 1 1 1 2 2 2 2 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|433639538|ref|YP_007285298.1| - 1e-12 48.2 0.0 1.5e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 gi|433639538|ref|YP_007285298.1| - 1.2e-05 24.1 0.0 1.5e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_9 PF08003.11 gi|433639538|ref|YP_007285298.1| - 5.7e-05 22.2 0.0 7.1e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 gi|433639538|ref|YP_007285298.1| - 0.00013 21.1 0.0 0.00014 21.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|433639538|ref|YP_007285298.1| - 0.00056 19.7 0.0 0.0007 19.4 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_2 PF00891.18 gi|433639538|ref|YP_007285298.1| - 0.00069 19.0 0.0 0.0012 18.1 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase domain MetW PF07021.12 gi|433639538|ref|YP_007285298.1| - 0.034 13.7 0.0 0.062 12.9 0.0 1.3 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW NodS PF05401.11 gi|433639538|ref|YP_007285298.1| - 0.039 13.6 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Pilin_N PF07790.11 gi|433639539|ref|YP_007285299.1| - 3e-11 44.1 3.6 4.4e-11 43.5 3.6 1.2 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal HrpB7 PF09486.10 gi|433639540|ref|YP_007285300.1| - 0.00038 20.9 0.9 0.00069 20.0 0.9 1.3 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) HTH_IclR PF09339.10 gi|433639541|ref|YP_007285301.1| - 0.012 15.4 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433639541|ref|YP_007285301.1| - 0.12 12.3 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_53 PF18606.1 gi|433639541|ref|YP_007285301.1| - 0.17 11.6 0.0 0.42 10.3 0.0 1.7 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain DUF3489 PF11994.8 gi|433639541|ref|YP_007285301.1| - 0.18 11.9 0.6 4.5 7.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3489) Radical_SAM PF04055.21 gi|433639542|ref|YP_007285302.1| - 1.5e-06 28.7 1.2 0.00076 19.9 1.2 2.7 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|433639542|ref|YP_007285302.1| - 0.0052 16.9 0.1 0.0091 16.1 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain PAS_4 PF08448.10 gi|433639543|ref|YP_007285303.1| - 2.2e-25 89.0 4.1 3.2e-12 46.6 0.4 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|433639543|ref|YP_007285303.1| - 3.5e-23 81.8 0.0 6.9e-13 48.6 0.0 3.0 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.7 gi|433639543|ref|YP_007285303.1| - 2.3e-19 69.6 0.0 1.2e-10 41.5 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.7 gi|433639543|ref|YP_007285303.1| - 2.7e-12 46.4 0.2 2.4e-05 24.3 0.0 3.3 3 0 0 3 3 3 2 PAS domain HisKA PF00512.25 gi|433639543|ref|YP_007285303.1| - 4.8e-11 42.5 0.3 2.2e-10 40.4 0.3 2.3 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 gi|433639543|ref|YP_007285303.1| - 2.2e-07 31.4 0.0 5.3e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.12 gi|433639543|ref|YP_007285303.1| - 4.6e-07 30.0 0.0 0.0092 16.3 0.0 2.4 2 0 0 2 2 2 2 PAS fold PAS_7 PF12860.7 gi|433639543|ref|YP_007285303.1| - 0.0034 17.5 0.0 0.039 14.1 0.0 2.6 2 0 0 2 2 2 1 PAS fold DUF373 PF04123.13 gi|433639544|ref|YP_007285304.1| - 5.6e-117 390.9 8.6 7e-117 390.6 8.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DUF21 PF01595.20 gi|433639545|ref|YP_007285305.1| - 2e-46 157.9 1.0 2.6e-46 157.5 1.0 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|433639545|ref|YP_007285305.1| - 8.8e-22 76.9 0.7 2.3e-21 75.6 0.7 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|433639545|ref|YP_007285305.1| - 5.7e-08 33.1 3.4 0.0048 17.3 0.6 2.7 2 0 0 2 2 2 2 CBS domain polyprenyl_synt PF00348.17 gi|433639546|ref|YP_007285306.1| - 2.1e-51 174.5 0.0 2.7e-51 174.1 0.0 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase MCPsignal PF00015.21 gi|433639547|ref|YP_007285307.1| - 7.5e-34 117.0 27.9 7.5e-34 117.0 27.9 5.4 2 1 3 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|433639547|ref|YP_007285307.1| - 1.6e-12 47.6 3.4 5e-11 42.8 0.4 5.5 7 2 0 7 7 7 2 HAMP domain dCache_1 PF02743.18 gi|433639547|ref|YP_007285307.1| - 1.4e-06 28.3 0.6 1.4e-06 28.3 0.6 3.9 2 1 1 3 3 3 1 Cache domain DUF948 PF06103.11 gi|433639547|ref|YP_007285307.1| - 6.7e-05 23.1 3.7 6.7e-05 23.1 3.7 7.0 4 1 3 7 7 7 3 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 gi|433639547|ref|YP_007285307.1| - 0.00061 19.8 31.0 0.11 12.5 5.9 6.2 4 2 3 7 7 7 2 Protein of unknown function (DUF1664) Syntaxin_2 PF14523.6 gi|433639547|ref|YP_007285307.1| - 0.019 15.3 8.8 5.3 7.5 0.1 5.3 2 2 2 4 4 4 0 Syntaxin-like protein CLN3 PF02487.17 gi|433639547|ref|YP_007285307.1| - 0.026 13.6 0.0 0.026 13.6 0.0 2.6 3 2 0 3 3 2 0 CLN3 protein GAT PF03127.14 gi|433639547|ref|YP_007285307.1| - 0.06 13.7 0.5 0.06 13.7 0.5 4.4 4 2 1 5 5 5 0 GAT domain MtrG PF04210.13 gi|433639547|ref|YP_007285307.1| - 0.082 12.8 1.4 6.4 6.7 0.2 3.0 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Phage_TAC_11 PF11836.8 gi|433639547|ref|YP_007285307.1| - 0.14 12.3 8.4 1.2 9.4 1.6 4.0 3 1 0 3 3 3 0 Phage tail tube protein, GTA-gp10 Gp-FAR-1 PF05823.12 gi|433639547|ref|YP_007285307.1| - 0.28 11.5 12.1 0.018 15.4 4.5 2.7 2 1 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Serum_albumin PF00273.20 gi|433639547|ref|YP_007285307.1| - 0.4 10.4 2.9 5.3 6.8 0.6 2.6 2 0 0 2 2 2 0 Serum albumin family IFT57 PF10498.9 gi|433639547|ref|YP_007285307.1| - 0.4 9.6 27.4 0.11 11.4 1.3 3.6 2 2 1 3 3 3 0 Intra-flagellar transport protein 57 PET10 PF17316.2 gi|433639547|ref|YP_007285307.1| - 1.4 8.4 6.1 0.93 9.0 3.4 2.0 2 0 0 2 2 2 0 Petite colonies protein 10 Allexi_40kDa PF05549.11 gi|433639547|ref|YP_007285307.1| - 1.4 8.3 19.1 4.1 6.8 0.1 4.6 2 2 1 4 4 4 0 Allexivirus 40kDa protein Seryl_tRNA_N PF02403.22 gi|433639547|ref|YP_007285307.1| - 2.5 8.4 40.9 1.9 8.7 1.3 5.5 2 2 3 5 5 5 0 Seryl-tRNA synthetase N-terminal domain DUF4559 PF15112.6 gi|433639547|ref|YP_007285307.1| - 3.4 7.3 19.7 1.7 8.2 7.3 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4559) Prominin PF05478.11 gi|433639547|ref|YP_007285307.1| - 5.8 4.7 18.1 1.1 7.2 3.2 2.5 1 1 0 2 2 2 0 Prominin Laminin_II PF06009.12 gi|433639547|ref|YP_007285307.1| - 8.7 6.4 53.2 0.38 10.8 5.6 7.1 3 2 2 6 6 6 0 Laminin Domain II DUF3584 PF12128.8 gi|433639547|ref|YP_007285307.1| - 9.1 3.6 49.6 0.49 7.9 22.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Peripla_BP_6 PF13458.6 gi|433639548|ref|YP_007285308.1| - 2.8e-24 86.4 8.0 3.6e-24 86.1 8.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 gi|433639548|ref|YP_007285308.1| - 1.3e-16 60.6 0.0 1.9e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region ETF_alpha PF00766.19 gi|433639549|ref|YP_007285309.1| - 1.7e-35 120.9 0.0 3.7e-35 119.8 0.0 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|433639549|ref|YP_007285309.1| - 4.4e-33 114.7 1.6 6.7e-33 114.1 1.6 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF PF01012.21 gi|433639550|ref|YP_007285310.1| - 9.4e-37 126.7 1.0 1.3e-36 126.2 1.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Ntox15 PF15604.6 gi|433639550|ref|YP_007285310.1| - 0.061 13.4 0.1 0.23 11.6 0.0 1.8 1 1 1 2 2 2 0 Novel toxin 15 TRAM PF01938.20 gi|433639551|ref|YP_007285311.1| - 1.7e-05 24.7 0.3 2.5e-05 24.2 0.3 1.2 1 0 0 1 1 1 1 TRAM domain XRN_N PF03159.18 gi|433639551|ref|YP_007285311.1| - 0.033 13.6 0.0 0.039 13.4 0.0 1.0 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus Sigma70_ner PF04546.13 gi|433639551|ref|YP_007285311.1| - 0.043 13.7 7.5 0.056 13.3 7.5 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region TFB6 PF17110.5 gi|433639551|ref|YP_007285311.1| - 0.087 12.6 1.8 0.11 12.2 1.8 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH FYDLN_acid PF09538.10 gi|433639551|ref|YP_007285311.1| - 0.099 13.3 10.5 0.12 13.1 9.8 1.5 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) PPP4R2 PF09184.11 gi|433639551|ref|YP_007285311.1| - 0.19 11.3 6.5 0.2 11.2 6.5 1.1 1 0 0 1 1 1 0 PPP4R2 CDC45 PF02724.14 gi|433639551|ref|YP_007285311.1| - 0.23 9.7 5.3 0.24 9.7 5.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 gi|433639551|ref|YP_007285311.1| - 1.8 6.7 8.3 1.8 6.7 8.3 1.0 1 0 0 1 1 1 0 Nop14-like family DNA_pol_phi PF04931.13 gi|433639551|ref|YP_007285311.1| - 9.3 4.2 13.7 11 4.0 13.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi DUF309 PF03745.14 gi|433639552|ref|YP_007285312.1| - 5.8e-19 67.5 4.5 5.8e-19 67.5 4.5 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF309) 7TM_transglut PF14402.6 gi|433639553|ref|YP_007285313.1| - 0.051 13.0 1.0 0.056 12.9 1.0 1.0 1 0 0 1 1 1 0 7 transmembrane helices usually fused to an inactive transglutaminase Epimerase PF01370.21 gi|433639554|ref|YP_007285314.1| - 1.3e-24 87.0 0.0 1.7e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|433639554|ref|YP_007285314.1| - 2.6e-12 47.0 0.0 4e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 gi|433639554|ref|YP_007285314.1| - 4.4e-12 45.6 0.0 5.7e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|433639554|ref|YP_007285314.1| - 5.9e-12 45.3 0.0 8.7e-11 41.5 0.0 2.0 2 0 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|433639554|ref|YP_007285314.1| - 1.2e-11 44.4 0.1 3.9e-07 29.5 0.4 3.0 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|433639554|ref|YP_007285314.1| - 7.5e-09 35.4 0.0 8.6e-08 31.9 0.0 2.4 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|433639554|ref|YP_007285314.1| - 6.1e-05 22.3 0.0 0.00011 21.4 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|433639554|ref|YP_007285314.1| - 0.00029 20.5 0.0 0.00056 19.5 0.0 1.5 1 0 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 gi|433639554|ref|YP_007285314.1| - 0.0019 18.5 0.0 0.013 15.7 0.0 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|433639554|ref|YP_007285314.1| - 0.035 14.4 0.0 0.059 13.6 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain DHNA PF04038.12 gi|433639555|ref|YP_007285315.1| - 2.8e-38 130.8 0.0 3.2e-38 130.6 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase TPP_enzyme_N PF02776.18 gi|433639555|ref|YP_007285315.1| - 0.045 13.4 0.1 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HalOD1 PF18545.1 gi|433639555|ref|YP_007285315.1| - 0.071 13.4 2.2 0.11 12.7 1.5 1.8 1 1 1 2 2 2 0 Halobacterial output domain 1 DUF883 PF05957.13 gi|433639556|ref|YP_007285316.1| - 0.031 14.9 1.1 0.3 11.7 0.1 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) Phe_tRNA-synt_N PF02912.18 gi|433639556|ref|YP_007285316.1| - 0.044 13.7 0.0 0.2 11.6 0.0 2.0 2 0 0 2 2 2 0 Aminoacyl tRNA synthetase class II, N-terminal domain T4SS PF07996.11 gi|433639556|ref|YP_007285316.1| - 0.052 14.0 0.2 0.078 13.4 0.2 1.3 1 1 0 1 1 1 0 Type IV secretion system proteins DUF3470 PF11953.8 gi|433639556|ref|YP_007285316.1| - 1.3 9.0 5.0 5.5 7.1 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF3470) Creatininase PF02633.14 gi|433639557|ref|YP_007285317.1| - 8.5e-70 234.9 5.6 9.7e-70 234.8 5.6 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DAGK_cat PF00781.24 gi|433639557|ref|YP_007285317.1| - 0.056 13.1 0.1 4.8 6.8 0.0 2.3 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain DUF2795 PF11387.8 gi|433639558|ref|YP_007285318.1| - 0.03 14.5 0.3 0.22 11.7 0.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2795) Yip1 PF04893.17 gi|433639559|ref|YP_007285319.1| - 1.2e-15 57.6 11.7 1.6e-15 57.3 11.7 1.2 1 0 0 1 1 1 1 Yip1 domain TatC PF00902.18 gi|433639559|ref|YP_007285319.1| - 0.0077 16.1 1.2 0.013 15.3 1.2 1.5 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) DHHC PF01529.20 gi|433639559|ref|YP_007285319.1| - 1 9.5 3.2 1.4 9.0 1.1 1.9 2 0 0 2 2 2 0 DHHC palmitoyltransferase Vma12 PF11712.8 gi|433639559|ref|YP_007285319.1| - 2.7 8.1 8.3 15 5.6 3.2 2.2 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase ABC_membrane PF00664.23 gi|433639560|ref|YP_007285320.1| - 2.5e-43 148.7 1.7 3.1e-43 148.4 1.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|433639560|ref|YP_007285320.1| - 6e-37 127.2 0.0 1.2e-36 126.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|433639560|ref|YP_007285320.1| - 0.00016 21.6 0.0 0.0003 20.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|433639560|ref|YP_007285320.1| - 0.0002 21.6 0.1 0.0015 18.8 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|433639560|ref|YP_007285320.1| - 0.0004 20.3 0.0 0.00082 19.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|433639560|ref|YP_007285320.1| - 0.0018 18.0 0.0 0.0057 16.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|433639560|ref|YP_007285320.1| - 0.0018 17.7 0.3 0.084 12.3 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|433639560|ref|YP_007285320.1| - 0.009 16.5 0.0 0.02 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|433639560|ref|YP_007285320.1| - 0.01 15.5 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|433639560|ref|YP_007285320.1| - 0.011 15.0 0.0 0.023 14.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 gi|433639560|ref|YP_007285320.1| - 0.016 15.6 0.3 0.041 14.2 0.3 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|433639560|ref|YP_007285320.1| - 0.022 15.3 0.0 0.061 13.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433639560|ref|YP_007285320.1| - 0.031 14.0 0.1 0.083 12.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|433639560|ref|YP_007285320.1| - 0.048 13.4 0.1 0.32 10.7 0.1 2.2 1 1 0 1 1 1 0 Guanylate kinase AAA PF00004.29 gi|433639560|ref|YP_007285320.1| - 0.055 13.9 0.0 0.42 11.0 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 gi|433639560|ref|YP_007285320.1| - 0.13 12.3 0.0 0.39 10.8 0.0 1.8 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_15 PF13175.6 gi|433639560|ref|YP_007285320.1| - 0.13 11.9 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain ABC_ATPase PF09818.9 gi|433639560|ref|YP_007285320.1| - 0.26 10.0 1.6 0.2 10.4 0.1 1.4 2 0 0 2 2 2 0 Predicted ATPase of the ABC class TPP_enzyme_C PF02775.21 gi|433639561|ref|YP_007285321.1| - 1.5e-49 167.7 0.1 1.5e-49 167.7 0.1 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|433639561|ref|YP_007285321.1| - 1.7e-49 167.8 2.9 1.7e-49 167.8 2.9 2.7 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433639561|ref|YP_007285321.1| - 7.7e-44 148.7 0.1 1.9e-43 147.5 0.1 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain ALS_ss_C PF10369.9 gi|433639562|ref|YP_007285322.1| - 1.4e-20 73.3 0.1 3.1e-20 72.2 0.1 1.6 1 0 0 1 1 1 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|433639562|ref|YP_007285322.1| - 2.6e-16 59.2 0.0 9e-16 57.5 0.0 1.8 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|433639562|ref|YP_007285322.1| - 1.4e-10 40.8 0.2 4.4e-10 39.2 0.1 2.0 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|433639562|ref|YP_007285322.1| - 0.015 15.9 0.0 0.024 15.2 0.0 1.3 1 0 0 1 1 1 0 ACT domain ACT_6 PF13740.6 gi|433639562|ref|YP_007285322.1| - 0.18 11.8 0.1 0.38 10.8 0.1 1.5 1 0 0 1 1 1 0 ACT domain IlvN PF07991.12 gi|433639563|ref|YP_007285323.1| - 1.2e-71 239.6 0.0 1.6e-71 239.2 0.0 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|433639563|ref|YP_007285323.1| - 9.3e-59 197.8 0.5 1.6e-58 197.1 0.5 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|433639563|ref|YP_007285323.1| - 1.1e-06 28.2 0.0 2.3e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|433639563|ref|YP_007285323.1| - 6.3e-06 26.7 0.0 1.6e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|433639563|ref|YP_007285323.1| - 3.6e-05 24.0 0.0 0.0001 22.5 0.0 1.8 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|433639563|ref|YP_007285323.1| - 0.0074 15.9 0.0 0.013 15.2 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Mur_ligase PF01225.25 gi|433639563|ref|YP_007285323.1| - 0.0094 16.3 0.3 0.023 15.0 0.3 1.7 1 1 0 1 1 1 1 Mur ligase family, catalytic domain AdoHcyase_NAD PF00670.21 gi|433639563|ref|YP_007285323.1| - 0.019 15.0 0.1 0.054 13.6 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 3HCDH_N PF02737.18 gi|433639563|ref|YP_007285323.1| - 0.13 12.2 3.6 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aconitase PF00330.20 gi|433639565|ref|YP_007285325.1| - 4.6e-141 471.0 0.0 5.3e-141 470.8 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|433639566|ref|YP_007285326.1| - 1.2e-18 67.8 0.0 1.9e-18 67.1 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Iso_dh PF00180.20 gi|433639567|ref|YP_007285327.1| - 5.6e-86 288.8 0.0 6.5e-86 288.6 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase ILVD_EDD PF00920.21 gi|433639568|ref|YP_007285328.1| - 4.1e-204 679.0 1.3 4.7e-204 678.8 1.3 1.0 1 0 0 1 1 1 1 Dehydratase family UL41A PF17591.2 gi|433639569|ref|YP_007285329.1| - 0.1 12.7 0.5 0.31 11.2 0.0 1.7 1 1 1 2 2 2 0 Herpesvirus UL41A DUF3458_C PF17432.2 gi|433639571|ref|YP_007285331.1| - 0.034 13.5 0.1 0.035 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats Fic PF02661.18 gi|433639572|ref|YP_007285332.1| - 6.1e-06 27.0 0.3 1.1e-05 26.2 0.3 1.5 1 1 0 1 1 1 1 Fic/DOC family AHSA1 PF08327.11 gi|433639573|ref|YP_007285333.1| - 0.036 14.3 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein ATP1G1_PLM_MAT8 PF02038.16 gi|433639574|ref|YP_007285334.1| - 2.4 7.6 0.0 2.4 7.6 0.0 3.2 4 0 0 4 4 4 0 ATP1G1/PLM/MAT8 family GSDH PF07995.11 gi|433639575|ref|YP_007285335.1| - 1.7e-36 126.2 0.0 6e-35 121.1 0.0 2.1 1 1 0 1 1 1 1 Glucose / Sorbosone dehydrogenase NHL PF01436.21 gi|433639575|ref|YP_007285335.1| - 0.0071 16.3 0.1 0.26 11.4 0.0 3.3 4 0 0 4 4 4 1 NHL repeat TAT_signal PF10518.9 gi|433639575|ref|YP_007285335.1| - 0.085 12.7 5.9 0.19 11.6 5.9 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|433639575|ref|YP_007285335.1| - 0.19 11.1 2.2 0.45 9.9 2.2 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LVIVD PF08309.11 gi|433639575|ref|YP_007285335.1| - 0.71 9.2 2.5 4.6 6.6 1.6 2.5 2 0 0 2 2 2 0 LVIVD repeat Glyco_hydro_3_C PF01915.22 gi|433639576|ref|YP_007285336.1| - 5.4e-51 173.4 0.1 1.6e-50 171.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 gi|433639576|ref|YP_007285336.1| - 1.5e-40 139.6 0.1 5.3e-39 134.5 0.1 2.2 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 gi|433639576|ref|YP_007285336.1| - 3.6e-24 84.6 0.1 7e-24 83.7 0.1 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain Cu-oxidase_2 PF07731.14 gi|433639577|ref|YP_007285337.1| - 4.6e-23 81.5 4.6 1.5e-22 79.8 1.0 2.5 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_3 PF07732.15 gi|433639577|ref|YP_007285337.1| - 6.8e-11 42.2 0.0 0.0023 17.9 0.0 3.8 4 0 0 4 4 4 3 Multicopper oxidase TAT_signal PF10518.9 gi|433639577|ref|YP_007285337.1| - 0.073 12.9 2.9 0.13 12.1 2.9 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Form_Nir_trans PF01226.17 gi|433639578|ref|YP_007285338.1| - 2.2e-42 145.0 12.1 2.8e-42 144.7 12.1 1.1 1 0 0 1 1 1 1 Formate/nitrite transporter Usp PF00582.26 gi|433639578|ref|YP_007285338.1| - 1.7e-10 41.6 0.2 2.6e-05 24.8 0.0 3.2 2 1 0 2 2 2 2 Universal stress protein family Acyl_transf_3 PF01757.22 gi|433639579|ref|YP_007285339.1| - 7.2e-21 74.6 26.0 9.5e-21 74.2 26.0 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.12 gi|433639579|ref|YP_007285339.1| - 0.00053 19.6 1.5 0.00053 19.6 1.5 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1624) ELFV_dehydrog_N PF02812.18 gi|433639580|ref|YP_007285340.1| - 1.3e-19 70.4 0.0 2.7e-19 69.3 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ELFV_dehydrog PF00208.21 gi|433639580|ref|YP_007285340.1| - 2.1e-19 70.2 0.2 3e-12 46.8 0.0 2.3 1 1 1 2 2 2 2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NAD_binding_2 PF03446.15 gi|433639580|ref|YP_007285340.1| - 0.00018 21.7 0.0 0.00067 19.9 0.0 2.1 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|433639580|ref|YP_007285340.1| - 0.0016 19.0 0.1 0.058 14.0 0.0 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|433639580|ref|YP_007285340.1| - 0.0062 16.4 0.1 0.022 14.7 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433639580|ref|YP_007285340.1| - 0.0065 16.7 0.3 0.019 15.2 0.1 1.9 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.6 gi|433639580|ref|YP_007285340.1| - 0.027 14.9 0.0 0.072 13.5 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 gi|433639580|ref|YP_007285340.1| - 0.089 12.1 0.1 1.2 8.5 0.0 2.3 1 1 1 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UDPG_MGDP_dh_N PF03721.14 gi|433639580|ref|YP_007285340.1| - 0.089 12.4 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433639580|ref|YP_007285340.1| - 0.11 11.9 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|433639580|ref|YP_007285340.1| - 0.12 12.4 1.8 0.19 11.8 0.1 2.1 2 1 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Ribonuc_red_sm PF00268.21 gi|433639581|ref|YP_007285341.1| - 4e-06 26.5 0.0 6.9e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain RHH_1 PF01402.21 gi|433639582|ref|YP_007285342.1| - 0.0089 15.9 0.5 2.2 8.4 0.2 2.4 2 0 0 2 2 2 2 Ribbon-helix-helix protein, copG family TetR_C_7 PF14246.6 gi|433639582|ref|YP_007285342.1| - 0.074 13.1 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain PIN PF01850.21 gi|433639583|ref|YP_007285343.1| - 4.2e-11 43.4 0.0 6e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 PIN domain CCG PF02754.16 gi|433639584|ref|YP_007285344.1| - 2.6e-17 62.8 0.0 2.4e-12 46.9 0.0 2.6 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.6 gi|433639584|ref|YP_007285344.1| - 4.7e-10 39.4 18.8 5.9e-09 35.9 9.4 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|433639584|ref|YP_007285344.1| - 1.4e-09 38.3 5.4 1.4e-09 38.3 5.4 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|433639584|ref|YP_007285344.1| - 4.2e-09 35.8 13.8 6.9e-05 22.5 2.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|433639584|ref|YP_007285344.1| - 9.3e-09 35.3 8.3 1.1e-08 35.1 6.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|433639584|ref|YP_007285344.1| - 1.1e-07 32.3 9.1 1.1e-07 32.3 9.1 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|433639584|ref|YP_007285344.1| - 6.9e-07 29.0 11.9 0.0011 18.9 2.2 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|433639584|ref|YP_007285344.1| - 0.00017 21.6 11.5 0.029 14.5 0.6 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|433639584|ref|YP_007285344.1| - 0.00023 22.0 12.4 0.00045 21.1 10.6 2.4 2 1 1 3 3 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|433639584|ref|YP_007285344.1| - 0.00047 20.6 11.6 0.00047 20.6 11.6 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|433639584|ref|YP_007285344.1| - 0.00069 19.9 18.4 0.0051 17.2 1.1 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|433639584|ref|YP_007285344.1| - 0.00079 19.4 5.2 0.00079 19.4 5.2 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|433639584|ref|YP_007285344.1| - 0.00087 19.5 0.6 0.43 10.8 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|433639584|ref|YP_007285344.1| - 0.001 19.9 5.7 0.024 15.4 0.2 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|433639584|ref|YP_007285344.1| - 0.11 13.3 9.2 0.16 12.7 0.3 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|433639584|ref|YP_007285344.1| - 8.5 7.6 26.2 1.9 9.6 6.1 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Rhomboid PF01694.22 gi|433639585|ref|YP_007285345.1| - 4.3e-05 23.6 28.8 0.0014 18.7 10.3 3.7 3 1 0 3 3 3 2 Rhomboid family DUF5437 PF17505.2 gi|433639585|ref|YP_007285345.1| - 1.4 9.1 3.2 1.5 8.9 0.4 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5437) HalOD1 PF18545.1 gi|433639586|ref|YP_007285346.1| - 2.6e-22 78.9 2.2 3.3e-22 78.6 2.2 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 DEAD PF00270.29 gi|433639588|ref|YP_007285348.1| - 6.6e-18 65.1 0.0 1.3e-17 64.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|433639588|ref|YP_007285348.1| - 5.9e-14 52.4 0.0 1.2e-13 51.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|433639588|ref|YP_007285348.1| - 1.2e-09 38.4 0.0 2.1e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit YyzF PF14116.6 gi|433639588|ref|YP_007285348.1| - 0.023 14.7 0.9 1.9 8.6 0.1 2.6 2 0 0 2 2 2 0 YyzF-like protein Zn_Tnp_IS1595 PF12760.7 gi|433639588|ref|YP_007285348.1| - 0.095 12.7 0.3 0.19 11.7 0.3 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|433639588|ref|YP_007285348.1| - 0.12 12.4 0.2 0.22 11.5 0.2 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Pyr_redox_2 PF07992.14 gi|433639590|ref|YP_007285350.1| - 3.3e-07 29.8 0.0 5e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|433639590|ref|YP_007285350.1| - 6.7e-06 25.6 0.0 1.3e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|433639590|ref|YP_007285350.1| - 1.4e-05 24.7 0.7 2.6e-05 23.8 0.7 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|433639590|ref|YP_007285350.1| - 4.6e-05 23.6 0.5 0.00027 21.1 0.2 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|433639590|ref|YP_007285350.1| - 6.1e-05 22.3 1.4 8.9e-05 21.7 0.2 1.9 2 1 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|433639590|ref|YP_007285350.1| - 0.0001 21.7 0.0 0.0025 17.1 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|433639590|ref|YP_007285350.1| - 0.00013 21.2 0.1 0.00018 20.7 0.1 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|433639590|ref|YP_007285350.1| - 0.0026 16.5 0.0 0.0035 16.1 0.0 1.1 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 gi|433639590|ref|YP_007285350.1| - 0.008 15.4 0.0 0.014 14.6 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 gi|433639590|ref|YP_007285350.1| - 0.0088 15.1 0.1 0.017 14.2 0.1 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein DAO PF01266.24 gi|433639590|ref|YP_007285350.1| - 0.013 15.2 1.4 0.013 15.2 1.4 2.5 1 1 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|433639590|ref|YP_007285350.1| - 0.022 15.3 0.1 0.049 14.2 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Hemopexin PF00045.19 gi|433639590|ref|YP_007285350.1| - 0.022 14.7 0.2 0.022 14.7 0.2 1.9 2 0 0 2 2 2 0 Hemopexin Peptidase_S9 PF00326.21 gi|433639591|ref|YP_007285351.1| - 2.8e-55 187.1 0.0 3.9e-55 186.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 gi|433639591|ref|YP_007285351.1| - 3.9e-43 147.8 0.0 5.2e-43 147.4 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Esterase PF00756.20 gi|433639591|ref|YP_007285351.1| - 0.059 13.0 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Hydrolase_4 PF12146.8 gi|433639591|ref|YP_007285351.1| - 0.13 11.5 0.0 0.29 10.4 0.0 1.5 2 0 0 2 2 2 0 Serine aminopeptidase, S33 BAT PF15915.5 gi|433639592|ref|YP_007285352.1| - 8.6e-34 116.7 1.6 1.2e-33 116.2 1.6 1.1 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_10 PF04967.12 gi|433639592|ref|YP_007285352.1| - 3e-22 78.1 0.0 5.9e-22 77.2 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain GerE PF00196.19 gi|433639592|ref|YP_007285352.1| - 0.0002 20.8 0.2 0.045 13.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 gi|433639592|ref|YP_007285352.1| - 0.00084 18.8 0.0 0.0022 17.5 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Homeodomain PF00046.29 gi|433639592|ref|YP_007285352.1| - 0.007 16.2 0.1 0.014 15.2 0.1 1.5 1 0 0 1 1 1 1 Homeodomain HTH_24 PF13412.6 gi|433639592|ref|YP_007285352.1| - 0.017 14.7 0.0 0.031 13.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|433639592|ref|YP_007285352.1| - 0.039 13.9 0.0 0.1 12.5 0.0 1.7 1 0 0 1 1 1 0 HTH domain LexA_DNA_bind PF01726.16 gi|433639592|ref|YP_007285352.1| - 0.056 13.2 0.5 0.44 10.4 0.5 2.1 1 1 0 1 1 1 0 LexA DNA binding domain Sigma70_r4_2 PF08281.12 gi|433639592|ref|YP_007285352.1| - 0.11 12.2 0.2 0.56 9.9 0.1 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 DUF1281 PF06924.11 gi|433639592|ref|YP_007285352.1| - 0.2 11.2 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) HalOD1 PF18545.1 gi|433639593|ref|YP_007285353.1| - 1.3e-20 73.5 0.1 3.3e-20 72.1 0.0 1.6 2 0 0 2 2 2 1 Halobacterial output domain 1 Aldo_ket_red PF00248.21 gi|433639594|ref|YP_007285354.1| - 1e-71 241.6 0.0 1.1e-71 241.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RHH_5 PF07878.11 gi|433639594|ref|YP_007285354.1| - 0.088 12.7 0.2 0.24 11.3 0.2 1.7 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 Cupin_2 PF07883.11 gi|433639595|ref|YP_007285355.1| - 7.5e-17 60.8 0.6 9.8e-17 60.4 0.6 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|433639595|ref|YP_007285355.1| - 2.3e-07 30.5 0.0 3.3e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|433639595|ref|YP_007285355.1| - 5.6e-07 29.5 0.1 6.3e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|433639595|ref|YP_007285355.1| - 0.0025 17.5 0.1 0.0039 16.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) CENP-C_C PF11699.8 gi|433639595|ref|YP_007285355.1| - 0.013 15.7 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Mif2/CENP-C like MannoseP_isomer PF01050.18 gi|433639595|ref|YP_007285355.1| - 0.018 15.0 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase ARD PF03079.14 gi|433639595|ref|YP_007285355.1| - 0.062 13.5 0.1 0.089 13.0 0.1 1.3 1 0 0 1 1 1 0 ARD/ARD' family Cupin_6 PF12852.7 gi|433639595|ref|YP_007285355.1| - 0.064 13.0 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Cupin CSD PF00313.22 gi|433639596|ref|YP_007285356.1| - 5.3e-20 71.1 0.0 5.7e-20 70.9 0.0 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|433639596|ref|YP_007285356.1| - 0.05 13.3 2.5 0.063 13.0 2.5 1.2 1 0 0 1 1 1 0 Ribonuclease B OB domain S1-like PF14444.6 gi|433639596|ref|YP_007285356.1| - 0.17 11.9 0.4 0.21 11.5 0.4 1.4 1 1 0 1 1 1 0 S1-like LPG_synthase_TM PF03706.13 gi|433639597|ref|YP_007285357.1| - 0.0058 16.2 6.8 0.007 15.9 6.8 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region YqzM PF14141.6 gi|433639597|ref|YP_007285357.1| - 0.11 12.6 1.9 0.11 12.6 1.9 2.1 2 0 0 2 2 2 0 YqzM-like protein Pro_CA PF00484.19 gi|433639598|ref|YP_007285358.1| - 1.5e-23 83.8 0.0 2e-23 83.4 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase tRNA-synt_2b PF00587.25 gi|433639599|ref|YP_007285359.1| - 2e-28 99.6 0.0 3.1e-28 98.9 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|433639599|ref|YP_007285359.1| - 2.3e-27 95.4 3.3 3.4e-27 94.8 3.3 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain ZapB PF06005.12 gi|433639599|ref|YP_007285359.1| - 0.11 13.0 5.9 4.3 7.9 1.4 2.5 2 0 0 2 2 2 0 Cell division protein ZapB FapA PF03961.13 gi|433639599|ref|YP_007285359.1| - 0.13 10.8 0.6 0.18 10.4 0.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A RRM_3 PF08777.11 gi|433639599|ref|YP_007285359.1| - 0.13 12.3 1.2 0.38 10.8 0.8 2.0 2 0 0 2 2 2 0 RNA binding motif Rhabdo_M2 PF04785.12 gi|433639599|ref|YP_007285359.1| - 0.17 11.2 0.2 0.31 10.4 0.2 1.3 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 HalOD1 PF18545.1 gi|433639601|ref|YP_007285361.1| - 4.8e-24 84.4 3.4 8.1e-24 83.7 3.4 1.4 1 0 0 1 1 1 1 Halobacterial output domain 1 HTH_10 PF04967.12 gi|433639602|ref|YP_007285362.1| - 8.2e-19 67.2 0.1 1.4e-18 66.4 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639602|ref|YP_007285362.1| - 2.6e-10 40.4 0.1 4.1e-10 39.7 0.1 1.3 1 0 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433639602|ref|YP_007285362.1| - 3.6e-07 29.6 1.8 8.4e-07 28.4 1.8 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|433639602|ref|YP_007285362.1| - 3.8e-05 23.3 0.8 0.00048 19.7 0.8 2.2 1 1 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433639602|ref|YP_007285362.1| - 0.0059 16.5 0.1 0.011 15.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|433639602|ref|YP_007285362.1| - 0.0064 16.5 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r3 PF04539.16 gi|433639602|ref|YP_007285362.1| - 0.021 14.9 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 HTH_28 PF13518.6 gi|433639602|ref|YP_007285362.1| - 0.023 14.8 0.1 0.057 13.6 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|433639602|ref|YP_007285362.1| - 0.033 14.3 0.0 0.056 13.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase HTH_24 PF13412.6 gi|433639602|ref|YP_007285362.1| - 0.051 13.1 0.0 0.098 12.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|433639602|ref|YP_007285362.1| - 0.065 13.1 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_AsnC-type PF13404.6 gi|433639602|ref|YP_007285362.1| - 0.15 11.9 0.6 0.27 11.1 0.6 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 gi|433639603|ref|YP_007285363.1| - 8.5e-18 63.9 0.0 1.4e-17 63.2 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639603|ref|YP_007285363.1| - 1.1e-07 31.9 0.0 1.6e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_24 PF13412.6 gi|433639603|ref|YP_007285363.1| - 0.00025 20.5 0.0 0.00051 19.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|433639603|ref|YP_007285363.1| - 0.00077 19.3 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 gi|433639603|ref|YP_007285363.1| - 0.0011 18.7 0.4 0.004 17.0 0.1 2.0 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|433639603|ref|YP_007285363.1| - 0.0011 18.4 0.0 0.0031 17.0 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|433639603|ref|YP_007285363.1| - 0.0012 18.5 0.1 0.0051 16.5 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|433639603|ref|YP_007285363.1| - 0.087 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 HTH domain Sigma70_r3 PF04539.16 gi|433639603|ref|YP_007285363.1| - 0.14 12.3 0.1 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Sigma-70 region 3 HTH_17 PF12728.7 gi|433639603|ref|YP_007285363.1| - 0.17 12.1 0.1 0.56 10.4 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HisKA_2 PF07568.12 gi|433639604|ref|YP_007285364.1| - 0.018 15.1 0.3 0.036 14.2 0.3 1.6 1 0 0 1 1 1 0 Histidine kinase Mif2_N PF15624.6 gi|433639604|ref|YP_007285364.1| - 0.022 15.4 0.1 0.037 14.7 0.1 1.6 1 1 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal HTH_20 PF12840.7 gi|433639604|ref|YP_007285364.1| - 0.046 13.8 0.8 0.13 12.4 0.8 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain TetR_C_35 PF18556.1 gi|433639604|ref|YP_007285364.1| - 0.066 13.4 2.1 0.075 13.2 1.1 1.6 1 1 1 2 2 2 0 Bacterial Tetracyclin repressor, C-terminal domain LmjF365940-deam PF14421.6 gi|433639605|ref|YP_007285365.1| - 0.033 13.8 1.1 2.3 7.8 0.1 2.1 1 1 1 2 2 2 0 A distinct subfamily of CDD/CDA-like deaminases dCMP_cyt_deam_1 PF00383.23 gi|433639605|ref|YP_007285365.1| - 0.036 13.9 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region CPBP PF02517.16 gi|433639606|ref|YP_007285366.1| - 5e-12 46.0 5.5 5e-12 46.0 5.5 2.4 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease Rhodanese PF00581.20 gi|433639607|ref|YP_007285367.1| - 3.2e-13 50.1 0.0 5.9e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Lactamase_B PF00753.27 gi|433639607|ref|YP_007285367.1| - 2.6e-09 37.4 5.1 1.2e-08 35.3 5.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433639607|ref|YP_007285367.1| - 0.0013 18.3 0.2 0.0026 17.3 0.2 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Bacteriocin_IIc PF10439.9 gi|433639607|ref|YP_007285367.1| - 0.058 13.5 0.0 0.26 11.5 0.0 2.0 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide SnoaL_2 PF12680.7 gi|433639608|ref|YP_007285368.1| - 5.1e-16 59.2 4.6 5.7e-16 59.0 4.6 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|433639608|ref|YP_007285368.1| - 5.7e-07 29.4 0.9 6e-07 29.3 0.2 1.3 2 0 0 2 2 2 1 SnoaL-like polyketide cyclase SnoaL_4 PF13577.6 gi|433639608|ref|YP_007285368.1| - 4e-05 23.7 0.3 5.1e-05 23.4 0.3 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|433639608|ref|YP_007285368.1| - 5.7e-05 23.5 0.4 6.7e-05 23.2 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) NTF2 PF02136.20 gi|433639608|ref|YP_007285368.1| - 0.00089 19.8 0.0 0.0013 19.3 0.0 1.3 1 1 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_3 PF13474.6 gi|433639608|ref|YP_007285368.1| - 0.003 17.8 0.0 0.004 17.4 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain LEH PF07858.12 gi|433639608|ref|YP_007285368.1| - 0.058 13.5 0.1 0.1 12.7 0.1 1.4 1 1 0 1 1 1 0 Limonene-1,2-epoxide hydrolase catalytic domain ABC_membrane PF00664.23 gi|433639609|ref|YP_007285369.1| - 6.5e-42 144.1 5.0 8.4e-42 143.7 5.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|433639609|ref|YP_007285369.1| - 8.8e-36 123.4 0.0 1.5e-35 122.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|433639609|ref|YP_007285369.1| - 2.6e-05 23.8 0.1 0.0026 17.3 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|433639609|ref|YP_007285369.1| - 0.00026 20.8 0.3 0.00086 19.1 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433639609|ref|YP_007285369.1| - 0.00085 19.8 0.0 0.021 15.3 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433639609|ref|YP_007285369.1| - 0.0011 19.2 0.1 0.0046 17.2 0.1 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|433639609|ref|YP_007285369.1| - 0.0023 17.8 0.0 0.0049 16.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|433639609|ref|YP_007285369.1| - 0.0026 18.2 0.8 0.0093 16.4 0.8 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|433639609|ref|YP_007285369.1| - 0.0036 17.0 0.0 0.0085 15.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|433639609|ref|YP_007285369.1| - 0.01 16.4 0.0 0.027 15.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|433639609|ref|YP_007285369.1| - 0.012 15.4 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|433639609|ref|YP_007285369.1| - 0.027 13.7 0.1 0.074 12.3 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin ACR_tran PF00873.19 gi|433639609|ref|YP_007285369.1| - 0.028 12.1 0.5 0.046 11.4 0.5 1.2 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1129 PF06570.11 gi|433639609|ref|YP_007285369.1| - 0.031 13.8 0.3 0.031 13.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) AAA_33 PF13671.6 gi|433639609|ref|YP_007285369.1| - 0.057 13.6 0.0 0.17 12.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|433639609|ref|YP_007285369.1| - 0.085 12.9 0.0 0.36 10.9 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase TsaE PF02367.17 gi|433639609|ref|YP_007285369.1| - 0.096 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 gi|433639609|ref|YP_007285369.1| - 0.13 12.8 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 gi|433639609|ref|YP_007285369.1| - 0.17 11.7 0.0 0.62 9.8 0.0 1.7 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DEAD PF00270.29 gi|433639609|ref|YP_007285369.1| - 0.17 11.7 0.3 2.3 8.0 0.3 2.2 1 1 0 1 1 1 0 DEAD/DEAH box helicase DUF2207 PF09972.9 gi|433639609|ref|YP_007285369.1| - 0.59 8.8 8.4 0.19 10.4 0.2 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) CysA_C_terminal PF17850.1 gi|433639609|ref|YP_007285369.1| - 0.84 10.3 4.3 27 5.4 0.3 3.7 4 0 0 4 4 3 0 CysA C-terminal regulatory domain EI24 PF07264.11 gi|433639609|ref|YP_007285369.1| - 5.2 7.3 12.3 2.1 8.5 7.2 2.2 2 0 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) UPF0139 PF03669.13 gi|433639612|ref|YP_007285372.1| - 0.056 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) Cpn60_TCP1 PF00118.24 gi|433639614|ref|YP_007285374.1| - 9.9e-162 539.0 13.4 1.1e-161 538.8 13.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Baculo_11_kDa PF06143.11 gi|433639614|ref|YP_007285374.1| - 0.089 12.4 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Baculovirus 11 kDa family Epimerase PF01370.21 gi|433639615|ref|YP_007285375.1| - 1.2e-52 178.7 0.0 1.5e-52 178.5 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433639615|ref|YP_007285375.1| - 5.3e-44 151.0 0.0 1.5e-43 149.5 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|433639615|ref|YP_007285375.1| - 2e-17 63.1 0.0 2.4e-17 62.9 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|433639615|ref|YP_007285375.1| - 3.4e-17 62.5 0.0 3.2e-16 59.3 0.0 2.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|433639615|ref|YP_007285375.1| - 3.9e-17 62.3 0.0 4.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|433639615|ref|YP_007285375.1| - 1.1e-15 58.0 0.0 1.8e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|433639615|ref|YP_007285375.1| - 1.2e-10 41.0 0.0 0.00014 21.2 0.0 2.9 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|433639615|ref|YP_007285375.1| - 6.5e-07 29.0 0.1 0.001 18.6 0.0 2.6 2 1 0 2 2 2 2 short chain dehydrogenase NmrA PF05368.13 gi|433639615|ref|YP_007285375.1| - 3.3e-06 26.8 0.0 3.1e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 NmrA-like family KR PF08659.10 gi|433639615|ref|YP_007285375.1| - 0.00074 19.5 0.1 0.033 14.1 0.1 2.6 2 1 0 2 2 2 1 KR domain NAD_binding_7 PF13241.6 gi|433639615|ref|YP_007285375.1| - 0.0011 19.4 0.0 0.0028 18.1 0.0 1.7 2 0 0 2 2 2 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|433639615|ref|YP_007285375.1| - 0.016 15.5 0.2 0.033 14.5 0.2 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Ldh_1_N PF00056.23 gi|433639615|ref|YP_007285375.1| - 0.035 14.2 0.1 0.054 13.6 0.1 1.2 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433639615|ref|YP_007285375.1| - 0.036 14.3 0.5 0.2 11.9 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain Glyco_trans_4_4 PF13579.6 gi|433639615|ref|YP_007285375.1| - 0.081 13.4 1.0 0.29 11.6 0.1 2.1 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain LPG_synthase_TM PF03706.13 gi|433639616|ref|YP_007285376.1| - 5.7e-40 137.7 37.2 7.3e-40 137.4 37.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region RGP PF03214.13 gi|433639617|ref|YP_007285377.1| - 2.1e-17 63.3 0.0 7.3e-17 61.5 0.0 1.7 1 1 0 2 2 2 1 Reversibly glycosylated polypeptide SBP_bac_11 PF13531.6 gi|433639618|ref|YP_007285378.1| - 3.6e-11 43.3 0.2 1.8e-10 41.0 0.2 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|433639618|ref|YP_007285378.1| - 3e-10 40.5 0.4 8.3e-10 39.1 0.4 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|433639618|ref|YP_007285378.1| - 1.9e-09 37.7 0.0 2.6e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|433639618|ref|YP_007285378.1| - 1.1e-07 31.5 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|433639618|ref|YP_007285378.1| - 0.032 13.7 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 TAT_signal PF10518.9 gi|433639618|ref|YP_007285378.1| - 0.21 11.5 3.4 0.47 10.4 3.4 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PMT_2 PF13231.6 gi|433639619|ref|YP_007285379.1| - 1.9e-09 37.9 8.0 1.9e-09 37.9 8.0 3.3 4 0 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Glyco_transf_22 PF03901.17 gi|433639619|ref|YP_007285379.1| - 0.026 13.8 0.1 0.042 13.1 0.1 1.2 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family Glycos_transf_2 PF00535.26 gi|433639620|ref|YP_007285380.1| - 2.3e-19 69.8 0.0 3.4e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|433639620|ref|YP_007285380.1| - 5.5e-07 29.7 0.3 7.6e-07 29.2 0.3 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 GMC_oxred_C PF05199.13 gi|433639621|ref|YP_007285381.1| - 1.2e-21 77.7 0.4 4.9e-21 75.8 0.4 2.0 1 1 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 gi|433639621|ref|YP_007285381.1| - 3.9e-14 52.7 0.0 6.2e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase FAD_binding_2 PF00890.24 gi|433639621|ref|YP_007285381.1| - 3.6e-09 36.2 2.1 0.0013 17.9 0.0 2.4 3 0 0 3 3 3 2 FAD binding domain DAO PF01266.24 gi|433639621|ref|YP_007285381.1| - 4.7e-09 36.3 6.6 4.9e-08 32.9 4.6 2.9 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|433639621|ref|YP_007285381.1| - 2.7e-07 30.1 1.5 2.1e-05 23.9 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|433639621|ref|YP_007285381.1| - 1.9e-06 27.3 0.0 0.00037 19.8 0.0 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|433639621|ref|YP_007285381.1| - 1.7e-05 23.7 0.6 0.00071 18.4 0.7 2.1 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|433639621|ref|YP_007285381.1| - 2.7e-05 24.3 0.2 8.2e-05 22.8 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|433639621|ref|YP_007285381.1| - 7.2e-05 22.0 0.5 0.00011 21.4 0.1 1.4 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox PF00070.27 gi|433639621|ref|YP_007285381.1| - 0.0046 17.5 0.0 0.076 13.6 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_7 PF12838.7 gi|433639621|ref|YP_007285381.1| - 0.0089 16.6 1.5 0.024 15.2 1.5 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Thi4 PF01946.17 gi|433639621|ref|YP_007285381.1| - 0.04 13.2 0.1 0.071 12.3 0.1 1.3 1 0 0 1 1 1 0 Thi4 family Pyr_redox_3 PF13738.6 gi|433639621|ref|YP_007285381.1| - 0.041 13.1 0.0 0.086 12.1 0.0 1.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|433639621|ref|YP_007285381.1| - 0.063 12.9 0.0 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA FAD_oxidored PF12831.7 gi|433639621|ref|YP_007285381.1| - 0.09 12.1 3.1 0.21 10.9 2.4 1.9 2 0 0 2 2 2 0 FAD dependent oxidoreductase Fer4 PF00037.27 gi|433639621|ref|YP_007285381.1| - 0.097 12.5 0.6 0.28 11.1 0.6 1.8 1 0 0 1 1 1 0 4Fe-4S binding domain Shikimate_DH PF01488.20 gi|433639621|ref|YP_007285381.1| - 0.1 12.7 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|433639621|ref|YP_007285381.1| - 0.15 12.5 0.0 0.32 11.5 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Fer4_9 PF13187.6 gi|433639621|ref|YP_007285381.1| - 0.21 11.8 0.7 0.41 10.9 0.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain NAD_binding_9 PF13454.6 gi|433639621|ref|YP_007285381.1| - 0.5 10.3 3.1 0.58 10.1 0.4 2.3 2 1 0 2 2 2 0 FAD-NAD(P)-binding Fer4_3 PF12798.7 gi|433639621|ref|YP_007285381.1| - 0.9 10.6 3.1 2.2 9.4 3.1 1.7 1 0 0 1 1 1 0 4Fe-4S binding domain Gluconate_2-dh3 PF13618.6 gi|433639622|ref|YP_007285382.1| - 1.5e-08 35.0 0.0 2.1e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 TAT_signal PF10518.9 gi|433639622|ref|YP_007285382.1| - 0.047 13.5 11.6 0.069 13.0 4.0 2.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 gi|433639623|ref|YP_007285383.1| - 2.6e-31 108.8 37.3 4.4e-18 65.7 9.1 3.4 2 2 1 3 3 3 3 Binding-protein-dependent transport system inner membrane component SRAP PF02586.14 gi|433639624|ref|YP_007285384.1| - 4.1e-54 183.4 0.0 4.2e-33 114.7 0.0 2.0 2 0 0 2 2 2 2 SOS response associated peptidase (SRAP) DUF302 PF03625.14 gi|433639626|ref|YP_007285386.1| - 2.1e-11 43.5 0.0 3.7e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF302 Phage_holin_2_3 PF16080.5 gi|433639627|ref|YP_007285387.1| - 0.09 12.5 3.2 0.21 11.4 3.2 1.8 1 1 0 1 1 1 0 Bacteriophage holin family HP1 DUF4781 PF16013.5 gi|433639627|ref|YP_007285387.1| - 0.23 10.3 1.8 0.21 10.4 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Rax2 PF12768.7 gi|433639627|ref|YP_007285387.1| - 1.4 8.4 2.9 1.6 8.2 2.9 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Ribonuc_L-PSP PF01042.21 gi|433639628|ref|YP_007285388.1| - 8.8e-38 129.0 0.1 9.8e-38 128.9 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YjgF_endoribonc PF14588.6 gi|433639628|ref|YP_007285388.1| - 0.064 13.4 0.1 0.12 12.5 0.1 1.5 1 1 1 2 2 2 0 YjgF/chorismate_mutase-like, putative endoribonuclease AsnC_trans_reg PF01037.21 gi|433639629|ref|YP_007285389.1| - 1.5e-11 44.1 0.0 2.3e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|433639629|ref|YP_007285389.1| - 8.5e-09 34.8 0.1 1.6e-08 34.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433639629|ref|YP_007285389.1| - 8.8e-07 28.7 0.1 1.6e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|433639629|ref|YP_007285389.1| - 5.6e-06 26.2 0.0 1.1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_AsnC-type PF13404.6 gi|433639629|ref|YP_007285389.1| - 9.9e-06 25.3 0.2 1.6e-05 24.6 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 gi|433639629|ref|YP_007285389.1| - 1e-05 25.5 0.1 4.9e-05 23.3 0.0 2.1 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|433639629|ref|YP_007285389.1| - 0.00087 19.0 0.0 0.0032 17.2 0.0 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|433639629|ref|YP_007285389.1| - 0.0018 18.3 0.0 0.0063 16.6 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_10 PF04967.12 gi|433639629|ref|YP_007285389.1| - 0.0028 17.4 0.1 0.0061 16.3 0.0 1.6 2 0 0 2 2 1 1 HTH DNA binding domain HTH_38 PF13936.6 gi|433639629|ref|YP_007285389.1| - 0.011 15.5 0.0 0.038 13.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|433639629|ref|YP_007285389.1| - 0.014 15.3 0.1 0.028 14.3 0.0 1.5 2 0 0 2 2 1 0 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|433639629|ref|YP_007285389.1| - 0.019 15.4 0.0 0.035 14.5 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|433639629|ref|YP_007285389.1| - 0.021 14.8 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GntR PF00392.21 gi|433639629|ref|YP_007285389.1| - 0.024 14.3 0.0 0.055 13.1 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|433639629|ref|YP_007285389.1| - 0.025 14.4 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 MarR family Mga PF05043.13 gi|433639629|ref|YP_007285389.1| - 0.031 14.9 0.0 0.079 13.6 0.0 1.6 2 0 0 2 2 2 0 Mga helix-turn-helix domain MarR PF01047.22 gi|433639629|ref|YP_007285389.1| - 0.037 14.0 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_50 PF18024.1 gi|433639629|ref|YP_007285389.1| - 0.047 13.3 0.0 0.093 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|433639629|ref|YP_007285389.1| - 0.055 13.3 0.0 0.5 10.2 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain HTH_29 PF13551.6 gi|433639629|ref|YP_007285389.1| - 0.12 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 gi|433639629|ref|YP_007285389.1| - 0.18 11.2 0.0 0.39 10.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|433639629|ref|YP_007285389.1| - 0.19 11.7 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Gln-synt_C PF00120.24 gi|433639630|ref|YP_007285390.1| - 4e-138 460.1 0.1 4.8e-138 459.9 0.1 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|433639630|ref|YP_007285390.1| - 6.6e-32 109.1 0.5 1.9e-30 104.4 0.0 2.3 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|433639630|ref|YP_007285390.1| - 0.00019 21.2 0.0 0.0016 18.2 0.0 2.2 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain DUF4349 PF14257.6 gi|433639631|ref|YP_007285391.1| - 0.031 13.7 0.1 0.045 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) VIT1 PF01988.19 gi|433639631|ref|YP_007285391.1| - 0.037 13.9 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 VIT family Phage_holin_3_6 PF07332.11 gi|433639631|ref|YP_007285391.1| - 0.037 14.1 2.3 0.099 12.7 1.3 1.9 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III MCC-bdg_PDZ PF10506.9 gi|433639631|ref|YP_007285391.1| - 0.099 12.7 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome CENP-F_leu_zip PF10473.9 gi|433639631|ref|YP_007285391.1| - 0.17 11.9 0.1 0.23 11.5 0.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF2933 PF11666.8 gi|433639631|ref|YP_007285391.1| - 1.3 9.1 5.4 6.2 6.9 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2933) TRM PF02005.16 gi|433639632|ref|YP_007285392.1| - 3.3e-89 299.7 0.0 3.8e-89 299.5 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase PrmA PF06325.13 gi|433639632|ref|YP_007285392.1| - 1.6e-06 27.8 0.1 2.2e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|433639632|ref|YP_007285392.1| - 0.0022 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|433639632|ref|YP_007285392.1| - 0.0065 16.1 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 UPF0020 PF01170.18 gi|433639632|ref|YP_007285392.1| - 0.03 14.0 0.0 0.066 12.9 0.0 1.6 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 Zn-ribbon_8 PF09723.10 gi|433639632|ref|YP_007285392.1| - 0.034 14.3 1.0 0.11 12.7 1.0 1.8 1 0 0 1 1 1 0 Zinc ribbon domain RNHCP PF12647.7 gi|433639632|ref|YP_007285392.1| - 0.15 12.1 0.4 0.32 11.0 0.4 1.5 1 0 0 1 1 1 0 RNHCP domain MTS PF05175.14 gi|433639632|ref|YP_007285392.1| - 0.18 11.4 0.1 0.33 10.5 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase small domain SWIM PF04434.17 gi|433639633|ref|YP_007285393.1| - 0.0056 16.3 0.8 0.61 9.8 0.1 2.2 2 0 0 2 2 2 2 SWIM zinc finger Phage_T4_gp19 PF06841.12 gi|433639634|ref|YP_007285394.1| - 3.3e-39 133.8 0.3 3.7e-39 133.7 0.3 1.0 1 0 0 1 1 1 1 T4-like virus tail tube protein gp19 DUF5319 PF17252.2 gi|433639636|ref|YP_007285396.1| - 0.23 11.7 1.7 0.36 11.1 0.0 2.2 3 0 0 3 3 3 0 Family of unknown function (DUF5319) Phage_T4_gp19 PF06841.12 gi|433639638|ref|YP_007285398.1| - 5.8e-30 103.9 0.0 6.4e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 T4-like virus tail tube protein gp19 Phage_sheath_1 PF04984.14 gi|433639639|ref|YP_007285399.1| - 3.8e-29 101.7 0.0 7.8e-29 100.7 0.0 1.5 1 0 0 1 1 1 1 Phage tail sheath protein subtilisin-like domain Phage_sheath_1C PF17482.2 gi|433639639|ref|YP_007285399.1| - 7.3e-19 67.7 0.0 1.3e-18 66.8 0.0 1.5 1 0 0 1 1 1 1 Phage tail sheath C-terminal domain Phage_sheath_1N PF17481.2 gi|433639639|ref|YP_007285399.1| - 0.0053 17.2 0.0 0.015 15.8 0.0 1.8 1 0 0 1 1 1 1 Phage tail sheath protein beta-sandwich domain OCD_Mu_crystall PF02423.15 gi|433639642|ref|YP_007285402.1| - 9.4e-96 320.5 0.5 1.1e-95 320.3 0.5 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Cupin_2 PF07883.11 gi|433639643|ref|YP_007285403.1| - 1.9e-09 37.1 0.2 2.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|433639643|ref|YP_007285403.1| - 0.0046 16.9 0.0 0.0059 16.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase TF_Zn_Ribbon PF08271.12 gi|433639643|ref|YP_007285403.1| - 0.013 15.0 3.9 0.013 15.0 3.9 1.7 2 0 0 2 2 2 0 TFIIB zinc-binding AraC_binding PF02311.19 gi|433639643|ref|YP_007285403.1| - 0.022 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Elf1 PF05129.13 gi|433639643|ref|YP_007285403.1| - 0.037 14.1 0.1 0.14 12.3 0.1 1.8 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like DpnI PF06044.12 gi|433639643|ref|YP_007285403.1| - 0.05 13.2 0.1 0.075 12.7 0.1 1.2 1 0 0 1 1 1 0 Dam-replacing family zf-ribbon_3 PF13248.6 gi|433639643|ref|YP_007285403.1| - 0.098 12.1 1.1 2.1 7.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Pirin PF02678.16 gi|433639643|ref|YP_007285403.1| - 0.15 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Pirin zf-TFIIB PF13453.6 gi|433639643|ref|YP_007285403.1| - 0.25 10.7 1.5 0.55 9.6 1.5 1.6 1 1 0 1 1 1 0 Transcription factor zinc-finger YhfH PF14149.6 gi|433639643|ref|YP_007285403.1| - 0.59 10.2 3.5 17 5.5 0.3 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-dskA_traR PF01258.17 gi|433639643|ref|YP_007285403.1| - 0.91 9.5 5.2 7.1 6.7 0.2 2.3 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DUF2071 PF09844.9 gi|433639644|ref|YP_007285404.1| - 1e-64 218.0 0.7 1.3e-64 217.8 0.7 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) ADC PF06314.11 gi|433639644|ref|YP_007285404.1| - 7.6e-08 32.2 0.1 1.1e-07 31.7 0.1 1.2 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) Acetyltransf_1 PF00583.25 gi|433639645|ref|YP_007285405.1| - 4e-11 43.2 0.0 4.8e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|433639645|ref|YP_007285405.1| - 2.6e-07 31.0 0.0 3.9e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433639645|ref|YP_007285405.1| - 3.2e-06 27.1 0.0 6.5e-06 26.1 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433639645|ref|YP_007285405.1| - 0.00084 20.0 0.1 0.001 19.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain tRNA-synt_1 PF00133.22 gi|433639646|ref|YP_007285406.1| - 7.4e-67 226.0 0.7 7.5e-26 90.5 0.2 4.8 1 1 3 4 4 4 4 tRNA synthetases class I (I, L, M and V) tRNA-synt_1_2 PF13603.6 gi|433639646|ref|YP_007285406.1| - 9.3e-56 188.3 0.0 1.4e-55 187.7 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 gi|433639646|ref|YP_007285406.1| - 3.5e-37 128.1 0.0 3e-23 82.2 0.0 4.2 3 1 1 4 4 4 4 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|433639646|ref|YP_007285406.1| - 3.7e-16 59.4 0.0 6.7e-16 58.6 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|433639646|ref|YP_007285406.1| - 3e-07 30.1 0.0 0.00042 19.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|433639646|ref|YP_007285406.1| - 3.7e-05 22.8 0.0 0.012 14.5 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class I (K) DZR PF12773.7 gi|433639646|ref|YP_007285406.1| - 0.014 15.4 4.6 0.42 10.7 0.4 2.5 2 1 0 2 2 2 0 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|433639646|ref|YP_007285406.1| - 0.069 13.2 8.7 0.2 11.7 0.0 3.5 3 1 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain TF_Zn_Ribbon PF08271.12 gi|433639646|ref|YP_007285406.1| - 0.64 9.6 7.6 6.6 6.3 0.2 3.5 3 0 0 3 3 3 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|433639646|ref|YP_007285406.1| - 1.7 8.1 7.1 20 4.8 0.2 3.9 4 0 0 4 4 4 0 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|433639646|ref|YP_007285406.1| - 3.4 7.9 8.9 3.5 7.8 0.2 2.9 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn-ribbon_8 PF09723.10 gi|433639646|ref|YP_007285406.1| - 6.2 7.0 11.3 7.6 6.7 4.3 3.3 2 2 0 2 2 2 0 Zinc ribbon domain HSP20 PF00011.21 gi|433639647|ref|YP_007285407.1| - 2.6e-19 69.3 0.0 3e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|433639647|ref|YP_007285407.1| - 1.7e-09 37.1 0.0 2.5e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 gi|433639647|ref|YP_007285407.1| - 0.041 14.0 2.3 0.077 13.1 2.2 1.6 1 1 0 1 1 1 0 GvpH PIH1_CS PF18201.1 gi|433639647|ref|YP_007285407.1| - 0.08 13.4 0.0 0.15 12.4 0.0 1.5 1 1 0 1 1 1 0 PIH1 CS-like domain PDT PF00800.18 gi|433639648|ref|YP_007285408.1| - 1.8e-50 171.3 0.4 2.2e-50 171.0 0.4 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|433639648|ref|YP_007285408.1| - 8.8e-08 31.8 0.0 8e-07 28.7 0.0 2.5 2 0 0 2 2 2 1 ACT domain MC1 PF05854.11 gi|433639649|ref|YP_007285409.1| - 3.2e-46 155.6 0.2 3.8e-46 155.3 0.2 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 SymE_toxin PF08845.10 gi|433639650|ref|YP_007285410.1| - 0.0027 17.7 0.0 0.0029 17.6 0.0 1.1 1 0 0 1 1 1 1 Toxin SymE, type I toxin-antitoxin system MazE_antitoxin PF04014.18 gi|433639650|ref|YP_007285410.1| - 0.023 14.6 0.3 0.036 14.0 0.3 1.3 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin ATPgrasp_Ter PF15632.6 gi|433639651|ref|YP_007285411.1| - 5.8e-06 26.1 0.0 1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|433639651|ref|YP_007285411.1| - 0.00028 20.4 0.0 0.00048 19.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|433639651|ref|YP_007285411.1| - 0.0074 16.3 0.0 0.066 13.3 0.0 2.2 1 1 0 1 1 1 1 ATP-grasp domain Biotin_carb_N PF00289.22 gi|433639651|ref|YP_007285411.1| - 0.16 12.5 0.0 0.3 11.7 0.0 1.3 1 0 0 1 1 1 0 Biotin carboxylase, N-terminal domain ATPgrasp_N PF18130.1 gi|433639651|ref|YP_007285411.1| - 0.18 12.4 0.6 0.42 11.2 0.1 1.8 2 0 0 2 2 2 0 ATP-grasp N-terminal domain tRNA_synthFbeta PF17759.1 gi|433639652|ref|YP_007285412.1| - 2.7e-39 134.8 0.0 3.8e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|433639652|ref|YP_007285412.1| - 3.2e-15 56.2 0.1 2.3e-14 53.5 0.1 2.4 3 0 0 3 3 3 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|433639652|ref|YP_007285412.1| - 6.8e-15 55.2 0.0 1.1e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|433639652|ref|YP_007285412.1| - 2e-08 34.4 0.9 0.00092 19.4 0.1 2.9 2 1 0 2 2 2 2 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|433639653|ref|YP_007285413.1| - 5.6e-79 265.1 0.0 7e-79 264.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) MarR PF01047.22 gi|433639653|ref|YP_007285413.1| - 4.4e-06 26.5 0.0 0.0063 16.4 0.0 2.4 2 0 0 2 2 2 2 MarR family DprA_WH PF17782.1 gi|433639653|ref|YP_007285413.1| - 0.00064 19.8 3.5 0.00064 19.8 3.5 3.3 3 0 0 3 3 3 1 DprA winged helix domain MarR_2 PF12802.7 gi|433639653|ref|YP_007285413.1| - 0.00065 19.5 1.6 0.004 17.0 0.3 2.6 2 0 0 2 2 2 1 MarR family tRNA-synt_2 PF00152.20 gi|433639653|ref|YP_007285413.1| - 0.0012 18.0 0.2 0.24 10.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) HTH_IclR PF09339.10 gi|433639653|ref|YP_007285413.1| - 0.0045 16.8 0.1 0.013 15.2 0.1 1.9 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|433639653|ref|YP_007285413.1| - 0.013 15.0 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding tRNA_synthFbeta PF17759.1 gi|433639653|ref|YP_007285413.1| - 0.024 14.1 0.2 0.71 9.3 0.0 2.4 2 0 0 2 2 2 0 Phenylalanyl tRNA synthetase beta chain CLM domain HTH_27 PF13463.6 gi|433639653|ref|YP_007285413.1| - 0.024 15.1 0.6 3.3 8.3 0.1 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|433639653|ref|YP_007285413.1| - 0.11 12.6 0.3 0.11 12.6 0.3 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|433639653|ref|YP_007285413.1| - 0.13 12.6 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 gi|433639653|ref|YP_007285413.1| - 0.16 11.9 0.0 6.2 6.8 0.0 2.8 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB Acetyltransf_1 PF00583.25 gi|433639654|ref|YP_007285414.1| - 2.6e-18 66.3 0.0 3.1e-18 66.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|433639654|ref|YP_007285414.1| - 5.9e-11 42.4 0.0 7e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|433639654|ref|YP_007285414.1| - 1.3e-10 41.6 0.0 1.8e-10 41.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|433639654|ref|YP_007285414.1| - 2.1e-06 27.8 0.0 4.9e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433639654|ref|YP_007285414.1| - 3.5e-06 26.9 0.0 8.3e-06 25.7 0.0 1.6 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_8 PF13523.6 gi|433639654|ref|YP_007285414.1| - 0.00012 21.7 0.0 0.00016 21.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|433639654|ref|YP_007285414.1| - 0.00047 20.9 0.0 0.00058 20.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain zf-C2H2_9 PF16293.5 gi|433639655|ref|YP_007285415.1| - 0.0071 16.2 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (1 copy) NUDIX PF00293.28 gi|433639657|ref|YP_007285417.1| - 7.7e-17 61.6 0.2 1e-16 61.1 0.2 1.2 1 0 0 1 1 1 1 NUDIX domain Glyoxalase_4 PF13669.6 gi|433639658|ref|YP_007285418.1| - 3.4e-06 27.3 0.0 3e-05 24.3 0.0 2.4 1 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|433639658|ref|YP_007285418.1| - 0.0012 18.9 0.5 1.2 9.2 0.0 2.8 2 1 0 2 2 2 2 Glyoxalase-like domain Rhodanese PF00581.20 gi|433639659|ref|YP_007285419.1| - 2.4e-14 53.7 0.0 2.9e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF3860 PF12976.7 gi|433639659|ref|YP_007285419.1| - 0.083 12.9 0.1 0.27 11.3 0.1 1.8 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3860) SUI1 PF01253.22 gi|433639660|ref|YP_007285420.1| - 1.1e-21 77.1 0.0 1.3e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|433639660|ref|YP_007285420.1| - 0.0013 19.0 0.0 0.002 18.4 0.0 1.5 1 1 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DTW PF03942.15 gi|433639660|ref|YP_007285420.1| - 0.02 14.6 0.3 0.026 14.3 0.3 1.1 1 0 0 1 1 1 0 DTW domain Transglut_core PF01841.19 gi|433639661|ref|YP_007285421.1| - 5.9e-27 94.4 0.0 1.1e-26 93.5 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF4129 PF13559.6 gi|433639661|ref|YP_007285421.1| - 0.00068 19.8 11.8 0.00068 19.8 11.8 3.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4129) DUF3488 PF11992.8 gi|433639661|ref|YP_007285421.1| - 0.0026 16.8 0.0 0.0026 16.8 0.0 2.4 2 1 0 3 3 3 1 Domain of unknown function (DUF3488) Transglut_core3 PF13471.6 gi|433639661|ref|YP_007285421.1| - 0.054 13.4 1.1 0.18 11.7 0.0 2.4 2 1 0 2 2 2 0 Transglutaminase-like superfamily DUF58 PF01882.18 gi|433639662|ref|YP_007285422.1| - 2.2e-11 43.9 1.5 7.3e-10 39.0 0.3 3.1 3 1 0 3 3 3 1 Protein of unknown function DUF58 AAA_3 PF07726.11 gi|433639663|ref|YP_007285423.1| - 6.2e-61 204.0 0.1 9.7e-61 203.4 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|433639663|ref|YP_007285423.1| - 2.4e-17 62.6 3.4 2.4e-17 62.6 3.4 1.9 2 0 0 2 2 2 1 AAA lid domain AAA_5 PF07728.14 gi|433639663|ref|YP_007285423.1| - 1.1e-13 51.4 0.0 4.5e-13 49.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|433639663|ref|YP_007285423.1| - 3.9e-06 26.7 0.0 4.8e-05 23.1 0.0 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA PF00004.29 gi|433639663|ref|YP_007285423.1| - 1.1e-05 25.8 0.0 2.1e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|433639663|ref|YP_007285423.1| - 6.1e-05 22.2 0.0 9.5e-05 21.6 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain RuvB_N PF05496.12 gi|433639663|ref|YP_007285423.1| - 7.3e-05 22.6 0.0 0.00081 19.2 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|433639663|ref|YP_007285423.1| - 0.0043 16.5 0.0 0.5 9.7 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_2 PF07724.14 gi|433639663|ref|YP_007285423.1| - 0.0052 16.9 0.0 0.019 15.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) MCM_lid PF17855.1 gi|433639663|ref|YP_007285423.1| - 0.094 13.1 0.0 0.2 12.1 0.0 1.5 1 1 0 1 1 1 0 MCM AAA-lid domain AAA_16 PF13191.6 gi|433639663|ref|YP_007285423.1| - 0.15 12.4 0.2 0.62 10.4 0.2 2.2 1 1 0 1 1 1 0 AAA ATPase domain CSD PF00313.22 gi|433639664|ref|YP_007285424.1| - 2.7e-20 72.0 0.1 2.9e-20 71.9 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|433639664|ref|YP_007285424.1| - 0.014 15.1 1.9 0.019 14.6 1.9 1.3 1 0 0 1 1 1 0 Ribonuclease B OB domain S1-like PF14444.6 gi|433639664|ref|YP_007285424.1| - 0.056 13.4 0.4 0.075 13.0 0.4 1.4 1 1 0 1 1 1 0 S1-like Bac_luciferase PF00296.20 gi|433639667|ref|YP_007285427.1| - 1.3e-63 215.3 12.8 1.8e-63 214.9 12.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase F420_ligase PF01996.16 gi|433639668|ref|YP_007285428.1| - 6.1e-53 179.7 0.2 6.9e-26 91.1 0.0 2.0 2 0 0 2 2 2 2 F420-0:Gamma-glutamyl ligase VAPB_antitox PF02697.14 gi|433639669|ref|YP_007285429.1| - 2.9e-16 60.0 0.3 3.8e-16 59.6 0.3 1.2 1 0 0 1 1 1 1 Putative antitoxin PIN PF01850.21 gi|433639670|ref|YP_007285430.1| - 7.9e-11 42.5 1.2 9.1e-11 42.3 1.2 1.0 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|433639670|ref|YP_007285430.1| - 0.068 13.9 1.0 0.11 13.3 0.9 1.4 1 1 0 1 1 1 0 PIN domain ABC_tran_CTD PF16326.5 gi|433639670|ref|YP_007285430.1| - 0.18 12.1 0.5 0.34 11.2 0.5 1.4 1 0 0 1 1 1 0 ABC transporter C-terminal domain IF-2B PF01008.17 gi|433639671|ref|YP_007285431.1| - 3.3e-43 147.9 0.1 4e-43 147.6 0.1 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family NUDIX PF00293.28 gi|433639671|ref|YP_007285431.1| - 5.4e-10 39.4 0.3 1.2e-09 38.3 0.3 1.5 1 0 0 1 1 1 1 NUDIX domain EamA PF00892.20 gi|433639672|ref|YP_007285432.1| - 2.4e-38 131.4 36.1 3.8e-19 69.2 16.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 gi|433639672|ref|YP_007285432.1| - 0.012 15.1 5.9 0.016 14.7 5.9 1.2 1 0 0 1 1 1 0 Solute carrier family 35 HAD_2 PF13419.6 gi|433639674|ref|YP_007285434.1| - 5e-14 52.8 0.0 6.8e-14 52.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433639674|ref|YP_007285434.1| - 5.3e-11 42.4 0.0 1.3e-10 41.2 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|433639674|ref|YP_007285434.1| - 3.1e-05 24.4 0.0 0.0019 18.5 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433639674|ref|YP_007285434.1| - 0.01 16.3 0.1 0.014 15.8 0.1 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DoxX PF07681.12 gi|433639675|ref|YP_007285435.1| - 5.3e-12 46.2 11.9 5.3e-12 46.2 11.9 1.7 2 0 0 2 2 2 1 DoxX HR_lesion PF05514.11 gi|433639675|ref|YP_007285435.1| - 0.00034 20.8 1.9 0.0015 18.8 0.3 2.0 1 1 1 2 2 2 1 HR-like lesion-inducing MMR_HSR1 PF01926.23 gi|433639676|ref|YP_007285436.1| - 1.3e-19 70.4 0.0 1.8e-19 69.9 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|433639676|ref|YP_007285436.1| - 1.1e-13 51.0 0.0 2.1e-12 46.8 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|433639676|ref|YP_007285436.1| - 3.6e-06 26.7 0.1 0.0005 19.7 0.1 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|433639676|ref|YP_007285436.1| - 4.9e-05 23.3 0.1 0.0092 15.9 0.1 2.4 2 1 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|433639676|ref|YP_007285436.1| - 0.00034 20.7 0.1 0.012 15.6 0.1 2.1 1 1 1 2 2 2 1 Dynamin family AAA_22 PF13401.6 gi|433639676|ref|YP_007285436.1| - 0.0035 17.6 0.0 0.018 15.3 0.0 2.2 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|433639676|ref|YP_007285436.1| - 0.0067 15.7 0.4 0.011 14.9 0.4 1.2 1 0 0 1 1 1 1 TIP49 P-loop domain ABC_tran PF00005.27 gi|433639676|ref|YP_007285436.1| - 0.0067 16.9 0.0 0.0086 16.6 0.0 1.4 1 1 0 1 1 1 1 ABC transporter ATP_bind_1 PF03029.17 gi|433639676|ref|YP_007285436.1| - 0.0077 16.0 1.5 0.57 9.9 0.1 2.7 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_25 PF13481.6 gi|433639676|ref|YP_007285436.1| - 0.014 15.0 0.4 0.28 10.7 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|433639676|ref|YP_007285436.1| - 0.019 15.4 0.0 0.045 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain MeaB PF03308.16 gi|433639676|ref|YP_007285436.1| - 0.019 13.9 0.4 2.2 7.2 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Roc PF08477.13 gi|433639676|ref|YP_007285436.1| - 0.025 14.8 0.1 0.058 13.6 0.0 1.7 2 0 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase AIG1 PF04548.16 gi|433639676|ref|YP_007285436.1| - 0.029 13.7 0.0 0.035 13.5 0.0 1.3 1 0 0 1 1 1 0 AIG1 family RNA_helicase PF00910.22 gi|433639676|ref|YP_007285436.1| - 0.12 12.8 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 gi|433639676|ref|YP_007285436.1| - 0.12 12.9 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|433639676|ref|YP_007285436.1| - 0.14 11.9 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_29 PF13555.6 gi|433639676|ref|YP_007285436.1| - 0.15 11.8 0.0 0.3 10.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|433639676|ref|YP_007285436.1| - 0.16 11.7 0.0 0.37 10.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 gi|433639676|ref|YP_007285436.1| - 0.16 11.8 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PduV-EutP PF10662.9 gi|433639676|ref|YP_007285436.1| - 0.18 11.6 0.0 0.52 10.0 0.0 1.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF389 PF04087.14 gi|433639677|ref|YP_007285437.1| - 1.8e-33 115.6 18.0 1.8e-33 115.6 18.0 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF389) DUF347 PF03988.12 gi|433639677|ref|YP_007285437.1| - 0.06 13.5 0.7 0.06 13.5 0.7 3.9 4 0 0 4 4 4 0 Repeat of Unknown Function (DUF347) HPP PF04982.13 gi|433639677|ref|YP_007285437.1| - 0.18 12.0 19.9 0.59 10.3 8.1 2.7 2 0 0 2 2 2 0 HPP family Arch_flagellin PF01917.16 gi|433639678|ref|YP_007285438.1| - 1.9e-12 47.7 0.1 2.2e-12 47.5 0.1 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin IMPDH PF00478.25 gi|433639679|ref|YP_007285439.1| - 4.4e-114 381.1 8.8 5.5e-114 380.8 8.8 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|433639679|ref|YP_007285439.1| - 5.8e-06 25.6 15.0 8.9e-06 25.0 9.8 2.3 1 1 1 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|433639679|ref|YP_007285439.1| - 2.8e-05 23.7 13.3 0.0038 16.7 6.9 2.3 1 1 0 2 2 2 2 Nitronate monooxygenase Glu_synthase PF01645.17 gi|433639679|ref|YP_007285439.1| - 0.00012 21.4 3.7 0.00012 21.4 3.7 2.1 3 0 0 3 3 3 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|433639679|ref|YP_007285439.1| - 0.00051 19.6 0.8 0.03 13.8 0.0 2.5 2 1 1 3 3 3 1 Histidine biosynthesis protein Aldolase PF01081.19 gi|433639679|ref|YP_007285439.1| - 0.011 15.1 0.6 0.023 14.1 0.5 1.5 1 1 0 1 1 1 0 KDPG and KHG aldolase QRPTase_C PF01729.19 gi|433639679|ref|YP_007285439.1| - 0.02 14.7 0.2 0.056 13.2 0.1 1.8 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain DHO_dh PF01180.21 gi|433639679|ref|YP_007285439.1| - 0.27 10.4 3.0 0.14 11.4 0.6 1.7 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase NanE PF04131.14 gi|433639679|ref|YP_007285439.1| - 1.4 8.1 6.9 13 4.9 3.6 3.2 1 1 2 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase 4HBT PF03061.22 gi|433639680|ref|YP_007285440.1| - 2.7e-17 62.9 0.2 3.7e-17 62.4 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|433639680|ref|YP_007285440.1| - 0.14 12.7 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily Ribonuc_red_sm PF00268.21 gi|433639681|ref|YP_007285441.1| - 3.3e-81 272.8 0.0 4.7e-81 272.3 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Ribonuc_red_lgC PF02867.15 gi|433639682|ref|YP_007285442.1| - 3.2e-173 577.0 0.0 3.8e-173 576.8 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|433639682|ref|YP_007285442.1| - 2e-20 72.6 0.0 1.1e-19 70.2 0.0 2.3 2 0 0 2 2 2 1 Ribonucleotide reductase, all-alpha domain HTH_32 PF13565.6 gi|433639682|ref|YP_007285442.1| - 0.0018 18.8 0.8 0.17 12.5 0.1 3.3 3 0 0 3 3 3 1 Homeodomain-like domain NOG1_N PF17835.1 gi|433639683|ref|YP_007285443.1| - 6.5e-34 117.2 0.3 1.4e-16 60.8 0.5 2.2 2 0 0 2 2 2 2 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|433639683|ref|YP_007285443.1| - 1.9e-19 69.8 0.0 4e-19 68.8 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|433639683|ref|YP_007285443.1| - 2.9e-19 68.6 0.0 6.1e-19 67.5 0.0 1.6 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|433639683|ref|YP_007285443.1| - 2e-09 37.2 0.0 3.8e-09 36.3 0.0 1.5 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|433639683|ref|YP_007285443.1| - 0.00066 19.6 0.0 0.0057 16.6 0.0 2.4 2 1 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 gi|433639683|ref|YP_007285443.1| - 0.0013 18.8 0.8 1.6 8.7 0.0 2.8 2 1 1 3 3 3 2 Dynamin family AAA_16 PF13191.6 gi|433639683|ref|YP_007285443.1| - 0.0024 18.3 0.1 0.0099 16.3 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain GTP_EFTU PF00009.27 gi|433639683|ref|YP_007285443.1| - 0.0044 16.6 0.0 0.045 13.3 0.0 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|433639683|ref|YP_007285443.1| - 0.01 15.1 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 AIG1 family Hrs_helical PF12210.8 gi|433639683|ref|YP_007285443.1| - 0.074 13.6 1.8 2.6 8.6 0.1 2.4 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate MMR_HSR1_Xtn PF16897.5 gi|433639683|ref|YP_007285443.1| - 0.097 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain DUF5518 PF17647.1 gi|433639684|ref|YP_007285444.1| - 1.4e-15 57.5 47.8 1.6e-15 57.3 47.8 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) SHOCT PF09851.9 gi|433639685|ref|YP_007285445.1| - 1.1e-07 31.3 3.0 1.6e-07 30.8 3.0 1.2 1 0 0 1 1 1 1 Short C-terminal domain DUF1707 PF08044.11 gi|433639685|ref|YP_007285445.1| - 7.7e-06 25.9 3.7 1e-05 25.5 3.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) DUF4212 PF13937.6 gi|433639685|ref|YP_007285445.1| - 0.064 13.6 4.5 0.1 13.0 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) PqiA PF04403.13 gi|433639685|ref|YP_007285445.1| - 0.13 12.1 0.2 0.13 12.1 0.2 1.9 1 1 1 2 2 2 0 Paraquat-inducible protein A DUF5381 PF17353.2 gi|433639685|ref|YP_007285445.1| - 0.17 11.6 2.0 0.26 11.0 2.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Glycos_transf_1 PF00534.20 gi|433639686|ref|YP_007285446.1| - 2.1e-19 69.7 0.0 3.2e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|433639686|ref|YP_007285446.1| - 5.5e-18 65.6 1.1 8.3e-18 65.0 0.4 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|433639686|ref|YP_007285446.1| - 5.7e-18 65.6 0.0 1.2e-17 64.6 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|433639686|ref|YP_007285446.1| - 8e-13 49.1 1.1 6.1e-12 46.3 0.2 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|433639686|ref|YP_007285446.1| - 3.9e-08 33.4 0.0 9e-08 32.2 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|433639686|ref|YP_007285446.1| - 0.00022 21.5 0.0 0.00088 19.6 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433639687|ref|YP_007285447.1| - 1.4e-19 70.8 0.0 3.1e-18 66.5 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|433639687|ref|YP_007285447.1| - 4.4e-16 58.9 0.0 9.3e-16 57.8 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|433639687|ref|YP_007285447.1| - 9.2e-14 51.8 0.1 1.6e-13 51.0 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|433639687|ref|YP_007285447.1| - 7.1e-07 29.8 0.1 1.4e-06 28.8 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|433639687|ref|YP_007285447.1| - 0.044 14.2 0.1 0.12 12.8 0.1 1.7 1 1 0 1 1 1 0 Glycosyl transferases group 1 Sulfatase PF00884.23 gi|433639688|ref|YP_007285448.1| - 0.008 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Metalloenzyme PF01676.18 gi|433639688|ref|YP_007285448.1| - 0.043 13.2 0.0 0.066 12.6 0.0 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily Sulfatase PF00884.23 gi|433639689|ref|YP_007285449.1| - 7.9e-44 150.3 0.0 1e-43 149.9 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|433639689|ref|YP_007285449.1| - 6.1e-13 49.1 1.6 4.9e-11 42.8 1.6 2.3 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 gi|433639689|ref|YP_007285449.1| - 0.18 10.8 0.6 0.35 9.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1501) LPG_synthase_TM PF03706.13 gi|433639690|ref|YP_007285450.1| - 7.6e-33 114.3 41.9 9e-33 114.1 41.9 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region YdjM PF04307.14 gi|433639691|ref|YP_007285451.1| - 1.2e-15 57.2 12.4 3.4e-15 55.8 12.4 1.6 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase YdjM PF04307.14 gi|433639692|ref|YP_007285452.1| - 2.4e-13 49.7 11.5 3.7e-13 49.1 11.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase SNARE_assoc PF09335.11 gi|433639693|ref|YP_007285453.1| - 1.4e-14 54.6 2.7 2.2e-14 53.9 2.7 1.3 1 0 0 1 1 1 1 SNARE associated Golgi protein Arylsulfotrans PF05935.11 gi|433639694|ref|YP_007285454.1| - 1.8e-10 40.3 0.3 2.1e-08 33.5 0.3 3.1 1 1 2 3 3 3 2 Arylsulfotransferase (ASST) Arylsulfotran_2 PF14269.6 gi|433639694|ref|YP_007285454.1| - 3.5e-09 36.5 0.2 4.7e-07 29.5 0.1 2.5 2 1 0 2 2 2 1 Arylsulfotransferase (ASST) NHL PF01436.21 gi|433639694|ref|YP_007285454.1| - 0.00047 20.0 1.5 0.28 11.3 0.0 3.9 4 0 0 4 4 4 2 NHL repeat Epimerase PF01370.21 gi|433639695|ref|YP_007285455.1| - 5.3e-36 124.3 0.1 6.4e-36 124.0 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433639695|ref|YP_007285455.1| - 9.4e-34 117.3 0.1 5e-33 114.9 0.1 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|433639695|ref|YP_007285455.1| - 1e-10 41.2 0.0 2.4e-10 40.0 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|433639695|ref|YP_007285455.1| - 3.4e-10 39.4 0.0 5.8e-10 38.6 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|433639695|ref|YP_007285455.1| - 3.1e-09 36.4 0.0 7.2e-06 25.4 0.0 2.7 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|433639695|ref|YP_007285455.1| - 1e-06 28.1 0.0 0.00013 21.2 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein KR PF08659.10 gi|433639695|ref|YP_007285455.1| - 0.0027 17.6 0.0 2.3 8.1 0.1 2.3 2 0 0 2 2 2 2 KR domain NAD_binding_10 PF13460.6 gi|433639695|ref|YP_007285455.1| - 0.039 13.8 0.0 0.061 13.2 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding PRA-PH PF01503.17 gi|433639696|ref|YP_007285456.1| - 6.5e-17 61.8 0.9 7.8e-17 61.5 0.9 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|433639696|ref|YP_007285456.1| - 0.00075 19.6 2.5 0.0011 19.1 2.5 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain Nup96 PF12110.8 gi|433639696|ref|YP_007285456.1| - 0.045 12.9 0.0 0.045 12.9 0.0 1.1 1 0 0 1 1 1 0 Nuclear protein 96 DNase-RNase PF02577.14 gi|433639697|ref|YP_007285457.1| - 3.2e-39 133.5 0.0 3.5e-39 133.4 0.0 1.0 1 0 0 1 1 1 1 Bifunctional nuclease DUF402 PF04167.13 gi|433639697|ref|YP_007285457.1| - 0.14 12.4 0.1 0.26 11.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF402) SNO PF01174.19 gi|433639698|ref|YP_007285458.1| - 5.8e-53 179.5 0.0 6.7e-53 179.3 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|433639698|ref|YP_007285458.1| - 4.1e-09 36.3 0.0 5.9e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|433639698|ref|YP_007285458.1| - 0.00037 20.2 0.0 0.00047 19.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|433639698|ref|YP_007285458.1| - 0.0063 16.3 0.1 0.0097 15.7 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|433639698|ref|YP_007285458.1| - 0.011 15.6 0.0 0.024 14.4 0.0 1.5 1 1 0 1 1 1 0 Glutamine amidotransferase class-I BPL_N PF09825.9 gi|433639698|ref|YP_007285458.1| - 0.045 12.8 0.0 0.13 11.4 0.0 1.6 2 0 0 2 2 2 0 Biotin-protein ligase, N terminal Sec61_beta PF03911.16 gi|433639699|ref|YP_007285459.1| - 3.5e-16 58.9 0.4 4.1e-16 58.7 0.4 1.1 1 0 0 1 1 1 1 Sec61beta family zf_UBZ PF18439.1 gi|433639700|ref|YP_007285460.1| - 0.13 11.9 0.7 10 5.8 0.0 2.6 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Lar_restr_allev PF14354.6 gi|433639700|ref|YP_007285460.1| - 0.19 12.1 3.2 0.52 10.7 2.8 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar DUF2754 PF10953.8 gi|433639700|ref|YP_007285460.1| - 0.44 10.8 2.4 0.87 9.9 2.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) Aminotran_5 PF00266.19 gi|433639701|ref|YP_007285461.1| - 8.6e-143 475.8 0.0 9.8e-143 475.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|433639701|ref|YP_007285461.1| - 1.5e-11 44.3 1.0 2.1e-11 43.8 1.0 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|433639701|ref|YP_007285461.1| - 7.8e-07 28.6 0.0 1.4e-06 27.7 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|433639701|ref|YP_007285461.1| - 8.2e-06 25.3 0.1 1e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase SelA PF03841.13 gi|433639701|ref|YP_007285461.1| - 0.00042 19.4 0.0 0.001 18.1 0.0 1.5 1 1 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 gi|433639701|ref|YP_007285461.1| - 0.0011 17.6 0.0 0.0019 16.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Pyridoxal_deC PF00282.19 gi|433639701|ref|YP_007285461.1| - 0.0067 15.2 0.1 0.011 14.5 0.1 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Reprolysin_3 PF13582.6 gi|433639703|ref|YP_007285463.1| - 9e-05 23.0 0.0 0.00017 22.1 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like NifU_N PF01592.16 gi|433639704|ref|YP_007285464.1| - 5.8e-29 100.8 0.1 6.7e-29 100.6 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Adhesin_Dr PF04619.12 gi|433639704|ref|YP_007285464.1| - 0.011 15.6 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 Dr-family adhesin SufE PF02657.15 gi|433639704|ref|YP_007285464.1| - 0.079 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain Gly-zipper_YMGG PF13441.6 gi|433639705|ref|YP_007285465.1| - 6.5 6.6 7.7 1.3 8.8 4.2 1.8 2 1 0 2 2 2 0 YMGG-like Gly-zipper Rad51 PF08423.11 gi|433639706|ref|YP_007285466.1| - 1.5e-72 244.0 0.1 1.4e-71 240.7 0.1 1.9 1 1 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|433639706|ref|YP_007285466.1| - 6.1e-12 46.0 0.0 2.2e-11 44.2 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|433639706|ref|YP_007285466.1| - 9.7e-08 31.5 0.1 0.0045 16.8 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif RecA PF00154.21 gi|433639706|ref|YP_007285466.1| - 9.9e-08 31.8 0.0 0.0095 15.4 0.0 2.2 2 0 0 2 2 2 2 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|433639706|ref|YP_007285466.1| - 1.6e-07 31.1 0.1 2.5e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 AAA domain HHH_2 PF12826.7 gi|433639706|ref|YP_007285466.1| - 1e-06 28.7 0.1 4.9e-06 26.5 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|433639706|ref|YP_007285466.1| - 0.00016 21.9 0.0 0.0004 20.6 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus ATPase PF06745.13 gi|433639706|ref|YP_007285466.1| - 0.00092 18.6 0.4 0.0017 17.7 0.4 1.8 1 1 0 1 1 1 1 KaiC DNA_pol_lambd_f PF10391.9 gi|433639706|ref|YP_007285466.1| - 0.0014 18.4 0.0 0.0057 16.5 0.0 2.1 1 1 0 1 1 1 1 Fingers domain of DNA polymerase lambda DUF4332 PF14229.6 gi|433639706|ref|YP_007285466.1| - 0.026 14.8 0.0 0.062 13.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) HHH_3 PF12836.7 gi|433639706|ref|YP_007285466.1| - 0.026 14.8 0.0 9.3 6.6 0.0 2.7 3 0 0 3 3 3 0 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|433639706|ref|YP_007285466.1| - 0.05 14.0 0.0 0.22 11.9 0.0 2.2 2 0 0 2 2 2 0 IMS family HHH motif Glyco_tranf_2_3 PF13641.6 gi|433639708|ref|YP_007285468.1| - 2.6e-20 73.3 0.9 5e-20 72.4 0.9 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|433639708|ref|YP_007285468.1| - 1.2e-18 67.4 0.0 1.7e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|433639708|ref|YP_007285468.1| - 2.5e-16 60.2 0.5 2.5e-16 60.2 0.5 1.7 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|433639708|ref|YP_007285468.1| - 2.3e-09 37.0 0.0 3.8e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|433639708|ref|YP_007285468.1| - 0.021 15.4 0.0 0.037 14.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 Phage_holin_3_6 PF07332.11 gi|433639708|ref|YP_007285468.1| - 0.24 11.5 5.2 0.37 10.8 0.4 2.2 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Peptidase_M48 PF01435.18 gi|433639709|ref|YP_007285469.1| - 3.8e-43 147.5 0.0 5e-43 147.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|433639709|ref|YP_007285469.1| - 7.6e-08 31.9 0.1 7.3e-07 28.7 0.0 2.0 2 0 0 2 2 2 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|433639709|ref|YP_007285469.1| - 0.0053 16.6 0.0 0.0075 16.1 0.0 1.2 1 0 0 1 1 1 1 SprT-like family BSP PF04450.12 gi|433639709|ref|YP_007285469.1| - 0.095 12.5 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria DUF2268 PF10026.9 gi|433639709|ref|YP_007285469.1| - 0.13 11.8 0.0 0.66 9.5 0.0 1.9 2 0 0 2 2 2 0 Predicted Zn-dependent protease (DUF2268) DUF4157 PF13699.6 gi|433639709|ref|YP_007285469.1| - 0.14 12.5 0.1 0.31 11.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) DUF3290 PF11694.8 gi|433639709|ref|YP_007285469.1| - 0.48 10.4 1.5 1.4 8.9 0.2 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) DUF2207 PF09972.9 gi|433639709|ref|YP_007285469.1| - 5 5.8 7.9 1.1 7.9 0.3 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) NMD3 PF04981.13 gi|433639710|ref|YP_007285470.1| - 3.8e-61 206.7 0.1 4.7e-61 206.4 0.1 1.1 1 0 0 1 1 1 1 NMD3 family Nudix_N_2 PF14803.6 gi|433639710|ref|YP_007285470.1| - 0.016 15.1 9.0 0.32 10.9 0.4 3.9 3 0 0 3 3 3 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|433639710|ref|YP_007285470.1| - 0.16 11.7 5.1 3.9 7.3 0.2 3.4 3 0 0 3 3 3 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|433639710|ref|YP_007285470.1| - 0.34 10.5 6.6 29 4.3 0.1 4.0 3 0 0 3 3 3 0 TFIIB zinc-binding DZR PF12773.7 gi|433639710|ref|YP_007285470.1| - 0.6 10.2 6.8 2.1 8.4 3.6 2.8 2 1 0 2 2 2 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|433639710|ref|YP_007285470.1| - 2.4 8.3 7.3 15 5.8 0.2 3.2 3 0 0 3 3 3 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|433639710|ref|YP_007285470.1| - 2.6 7.7 6.3 8.8 6.0 0.1 3.4 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Met_10 PF02475.16 gi|433639711|ref|YP_007285471.1| - 9.8e-48 162.5 0.0 4.9e-47 160.3 0.0 2.0 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_25 PF13649.6 gi|433639711|ref|YP_007285471.1| - 1.8e-05 25.4 0.0 6e-05 23.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|433639711|ref|YP_007285471.1| - 2.5e-05 23.9 0.0 4.1e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|433639711|ref|YP_007285471.1| - 3e-05 23.6 0.0 0.00093 18.8 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase small domain tRNA_U5-meth_tr PF05958.11 gi|433639711|ref|YP_007285471.1| - 0.011 14.8 0.0 0.014 14.4 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase PrmA PF06325.13 gi|433639711|ref|YP_007285471.1| - 0.02 14.3 0.1 0.035 13.5 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|433639711|ref|YP_007285471.1| - 0.023 14.4 0.0 0.073 12.7 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|433639711|ref|YP_007285471.1| - 0.025 15.2 0.0 0.11 13.2 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain DNA_methylase PF00145.17 gi|433639711|ref|YP_007285471.1| - 0.12 11.7 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase RrnaAD PF00398.20 gi|433639711|ref|YP_007285471.1| - 0.15 11.1 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Helicase_C_2 PF13307.6 gi|433639712|ref|YP_007285472.1| - 5.6e-21 75.4 0.0 7.9e-21 75.0 0.0 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|433639712|ref|YP_007285472.1| - 5e-06 26.2 0.0 8.7e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 DEAD_2 AAA_22 PF13401.6 gi|433639712|ref|YP_007285472.1| - 9.1e-05 22.7 0.0 0.00058 20.1 0.0 2.2 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|433639712|ref|YP_007285472.1| - 0.00017 21.7 0.0 0.17 11.9 0.0 2.9 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|433639712|ref|YP_007285472.1| - 0.00028 20.7 0.0 0.33 10.7 0.0 2.7 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|433639712|ref|YP_007285472.1| - 0.0012 18.7 0.2 1.7 8.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|433639712|ref|YP_007285472.1| - 0.0049 16.4 0.0 0.0093 15.4 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein AAA_16 PF13191.6 gi|433639712|ref|YP_007285472.1| - 0.014 15.8 0.5 0.084 13.2 0.0 2.6 2 1 1 3 3 3 0 AAA ATPase domain IstB_IS21 PF01695.17 gi|433639712|ref|YP_007285472.1| - 0.067 12.9 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|433639712|ref|YP_007285472.1| - 0.08 12.2 0.0 4.6 6.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 gi|433639712|ref|YP_007285472.1| - 0.083 13.2 0.0 0.22 11.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain DXP_redisom_C PF08436.12 gi|433639712|ref|YP_007285472.1| - 0.098 12.8 0.0 0.3 11.3 0.0 1.7 2 0 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AAA PF00004.29 gi|433639712|ref|YP_007285472.1| - 0.21 12.0 0.0 7 7.1 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) CxxCxxCC PF03692.15 gi|433639713|ref|YP_007285473.1| - 2.7e-07 31.2 0.8 0.011 16.4 0.0 2.2 2 0 0 2 2 2 2 Putative zinc- or iron-chelating domain DUF2613 PF11021.8 gi|433639716|ref|YP_007285476.1| - 4.1 7.6 7.4 0.5 10.5 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) DUF2207 PF09972.9 gi|433639716|ref|YP_007285476.1| - 4.7 5.9 4.0 5.1 5.7 4.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2795 PF11387.8 gi|433639717|ref|YP_007285477.1| - 0.004 17.3 0.1 0.025 14.8 0.1 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2795) PHP PF02811.19 gi|433639718|ref|YP_007285478.1| - 0.00027 21.3 0.0 0.00071 19.9 0.0 1.3 1 1 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|433639718|ref|YP_007285478.1| - 0.0073 16.0 0.1 0.016 15.0 0.1 1.5 1 0 0 1 1 1 1 PHP-associated E3_UbLigase_RBR PF18091.1 gi|433639719|ref|YP_007285479.1| - 0.037 14.1 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain YyzF PF14116.6 gi|433639719|ref|YP_007285479.1| - 2.4 8.2 7.1 1.7 8.7 0.6 2.7 3 0 0 3 3 3 0 YyzF-like protein CMD PF02627.20 gi|433639720|ref|YP_007285480.1| - 5.7e-09 35.9 1.2 1.4e-08 34.7 0.4 2.1 1 1 1 2 2 2 1 Carboxymuconolactone decarboxylase family EcoEI_R_C PF08463.10 gi|433639720|ref|YP_007285480.1| - 0.029 14.5 0.0 0.066 13.3 0.0 1.6 2 0 0 2 2 2 0 EcoEI R protein C-terminal DUF1206 PF06724.11 gi|433639722|ref|YP_007285482.1| - 0.047 13.8 4.2 0.056 13.5 0.2 2.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) NCE101 PF11654.8 gi|433639722|ref|YP_007285482.1| - 0.16 11.7 0.5 0.37 10.5 0.5 1.6 1 1 0 1 1 1 0 Non-classical export protein 1 Chlor_dismutase PF06778.12 gi|433639723|ref|YP_007285483.1| - 4.2e-66 222.2 0.0 7.6e-66 221.4 0.0 1.4 1 0 0 1 1 1 1 Chlorite dismutase ABM PF03992.16 gi|433639723|ref|YP_007285483.1| - 2.7e-10 40.2 0.0 2.7e-10 40.2 0.0 2.4 3 0 0 3 3 3 1 Antibiotic biosynthesis monooxygenase PadR PF03551.14 gi|433639724|ref|YP_007285484.1| - 3.6e-24 84.5 0.1 6.1e-24 83.8 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|433639724|ref|YP_007285484.1| - 0.0015 19.2 0.0 0.0023 18.6 0.0 1.3 1 0 0 1 1 1 1 Replication terminator protein DUF1007 PF06226.13 gi|433639724|ref|YP_007285484.1| - 0.012 15.6 0.2 0.021 14.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1007) TrmB PF01978.19 gi|433639724|ref|YP_007285484.1| - 0.038 13.9 0.2 0.21 11.5 0.1 2.3 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF505 PF04458.12 gi|433639724|ref|YP_007285484.1| - 0.071 11.5 0.1 0.086 11.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Peptidase_M50 PF02163.22 gi|433639725|ref|YP_007285485.1| - 4.9e-23 81.7 0.0 1.1e-22 80.5 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|433639725|ref|YP_007285485.1| - 2.4e-18 66.2 5.4 1.6e-07 31.5 0.5 3.4 1 1 2 3 3 3 3 PDZ domain PDZ_6 PF17820.1 gi|433639725|ref|YP_007285485.1| - 2.8e-09 36.7 9.5 2.1e-05 24.3 1.0 3.8 3 1 0 3 3 3 2 PDZ domain Tricorn_PDZ PF14685.6 gi|433639725|ref|YP_007285485.1| - 1e-08 35.0 5.0 0.0022 17.9 0.1 3.4 2 1 1 3 3 3 3 Tricorn protease PDZ domain PDZ PF00595.24 gi|433639725|ref|YP_007285485.1| - 2.2e-06 27.9 3.2 0.00049 20.4 0.5 2.5 2 0 0 2 2 2 2 PDZ domain GRASP55_65 PF04495.14 gi|433639725|ref|YP_007285485.1| - 0.021 15.2 0.0 8.1 6.8 0.0 2.3 2 0 0 2 2 2 0 GRASP55/65 PDZ-like domain tRNA-synt_1f PF01921.18 gi|433639726|ref|YP_007285486.1| - 1.5e-95 320.2 0.0 6.9e-95 318.0 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|433639726|ref|YP_007285486.1| - 2.1e-08 33.4 0.0 2e-06 26.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|433639726|ref|YP_007285486.1| - 0.0099 15.3 0.0 0.024 14.0 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.25 gi|433639726|ref|YP_007285486.1| - 0.018 14.4 0.0 4.4 6.5 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Glyco_hydro_8 PF01270.17 gi|433639726|ref|YP_007285486.1| - 0.071 11.9 0.1 0.11 11.3 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 8 AA_kinase PF00696.28 gi|433639727|ref|YP_007285487.1| - 1.9e-24 86.6 4.7 6.6e-24 84.8 4.7 1.7 1 1 0 1 1 1 1 Amino acid kinase family DUF2844 PF11005.8 gi|433639727|ref|YP_007285487.1| - 0.069 13.2 0.1 0.32 11.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2844) Peptidase_S8 PF00082.22 gi|433639728|ref|YP_007285488.1| - 2.4e-39 135.4 6.1 2.4e-39 135.4 6.1 2.5 2 0 0 2 2 2 1 Subtilase family NosD PF05048.13 gi|433639728|ref|YP_007285488.1| - 1e-14 54.4 21.7 1.5e-10 40.8 8.0 2.7 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) CarboxypepD_reg PF13620.6 gi|433639728|ref|YP_007285488.1| - 4.3e-14 52.5 2.5 4.3e-14 52.5 2.5 4.8 4 1 1 5 5 5 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|433639728|ref|YP_007285488.1| - 1.6e-10 40.8 3.4 1.6e-10 40.8 0.4 2.6 3 0 0 3 3 3 1 CarboxypepD_reg-like domain PEGA PF08308.11 gi|433639728|ref|YP_007285488.1| - 0.082 12.8 0.5 0.44 10.5 0.1 2.5 2 0 0 2 2 2 0 PEGA domain MetallophosN PF16371.5 gi|433639728|ref|YP_007285488.1| - 0.12 12.7 4.7 0.087 13.1 0.2 3.0 2 1 1 3 3 3 0 N terminal of Calcineurin-like phosphoesterase AMMECR1 PF01871.17 gi|433639728|ref|YP_007285488.1| - 0.22 11.1 0.1 0.43 10.2 0.1 1.4 1 0 0 1 1 1 0 AMMECR1 PGF-CTERM PF18204.1 gi|433639729|ref|YP_007285489.1| - 1.9e-06 27.6 3.2 1.9e-06 27.6 3.2 1.8 2 0 0 2 2 2 1 PGF-CTERM motif DUF900 PF05990.12 gi|433639730|ref|YP_007285490.1| - 1.5e-11 44.3 0.0 2e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF726 PF05277.12 gi|433639730|ref|YP_007285490.1| - 3.8e-09 35.9 0.0 5.4e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) Abhydrolase_6 PF12697.7 gi|433639730|ref|YP_007285490.1| - 5.3e-05 23.9 7.8 6.9e-05 23.6 7.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|433639730|ref|YP_007285490.1| - 0.011 15.0 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 gi|433639730|ref|YP_007285490.1| - 0.017 15.0 0.4 0.029 14.2 0.4 1.5 1 1 0 1 1 1 0 Serine hydrolase LIDHydrolase PF10230.9 gi|433639730|ref|YP_007285490.1| - 0.019 14.5 0.0 0.026 14.1 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Abhydrolase_1 PF00561.20 gi|433639730|ref|YP_007285490.1| - 0.064 12.9 0.0 0.2 11.3 0.0 1.7 1 1 0 1 1 1 0 alpha/beta hydrolase fold DUF1375 PF07119.12 gi|433639730|ref|YP_007285490.1| - 0.12 12.8 3.4 0.35 11.3 3.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) SDA1 PF05285.12 gi|433639731|ref|YP_007285491.1| - 0.028 13.8 13.6 0.029 13.8 13.6 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 gi|433639731|ref|YP_007285491.1| - 0.068 11.4 15.0 0.08 11.2 15.0 1.0 1 0 0 1 1 1 0 Nop14-like family Apt1 PF10351.9 gi|433639731|ref|YP_007285491.1| - 0.14 11.0 3.1 0.16 10.8 3.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain BSP_II PF05432.11 gi|433639731|ref|YP_007285491.1| - 0.18 11.5 24.0 0.23 11.1 24.0 1.2 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) CDC45 PF02724.14 gi|433639731|ref|YP_007285491.1| - 0.38 9.0 10.2 0.46 8.7 10.2 1.1 1 0 0 1 1 1 0 CDC45-like protein CobT PF06213.12 gi|433639731|ref|YP_007285491.1| - 0.77 9.1 15.5 1.1 8.6 15.5 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT TFIIF_alpha PF05793.12 gi|433639731|ref|YP_007285491.1| - 0.95 8.0 15.9 1 7.8 15.9 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Paf1 PF03985.13 gi|433639731|ref|YP_007285491.1| - 2.8 6.8 10.8 3.9 6.4 10.8 1.2 1 0 0 1 1 1 0 Paf1 DNA_pol_phi PF04931.13 gi|433639731|ref|YP_007285491.1| - 7.3 4.5 24.2 9.1 4.2 24.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi tRNA_anti-codon PF01336.25 gi|433639732|ref|YP_007285492.1| - 6.1e-30 103.0 16.5 2.7e-13 49.7 1.0 3.7 4 0 0 4 4 4 3 OB-fold nucleic acid binding domain REPA_OB_2 PF16900.5 gi|433639732|ref|YP_007285492.1| - 9e-15 54.4 4.9 3.5e-06 26.8 0.2 3.3 3 0 0 3 3 3 3 Replication protein A OB domain CDC24_OB3 PF17244.2 gi|433639732|ref|YP_007285492.1| - 3.9e-12 46.4 0.3 0.00046 20.0 0.0 3.2 3 0 0 3 3 3 3 Cell division control protein 24, OB domain 3 DUF4131 PF13567.6 gi|433639732|ref|YP_007285492.1| - 0.0018 18.0 1.3 1.8 8.2 0.1 3.3 4 0 0 4 4 4 2 Domain of unknown function (DUF4131) Rep_fac-A_C PF08646.10 gi|433639732|ref|YP_007285492.1| - 0.003 17.3 0.0 8.3 6.1 0.0 3.2 3 0 0 3 3 3 2 Replication factor-A C terminal domain tRNA_anti_2 PF13742.6 gi|433639732|ref|YP_007285492.1| - 0.0045 17.2 0.1 3.7 7.8 0.0 2.8 3 0 0 3 3 3 2 OB-fold nucleic acid binding domain POT1PC PF16686.5 gi|433639732|ref|YP_007285492.1| - 0.018 14.9 0.0 7.6 6.4 0.0 2.8 3 0 0 3 3 3 0 ssDNA-binding domain of telomere protection protein SSB PF00436.25 gi|433639732|ref|YP_007285492.1| - 0.036 14.1 0.3 2.4 8.2 0.0 3.2 3 1 0 3 3 3 0 Single-strand binding protein family CBFD_NFYB_HMF PF00808.23 gi|433639733|ref|YP_007285493.1| - 2.2e-26 91.9 1.1 2.5e-13 50.1 0.2 2.0 2 0 0 2 2 2 2 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|433639733|ref|YP_007285493.1| - 1.6e-14 54.3 2.3 7.5e-09 36.0 0.3 2.0 1 1 1 2 2 2 2 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|433639733|ref|YP_007285493.1| - 0.00093 19.3 1.2 0.0035 17.4 0.1 2.0 1 1 1 2 2 2 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 gi|433639733|ref|YP_007285493.1| - 0.011 16.1 1.0 0.019 15.4 0.4 1.6 2 0 0 2 2 2 0 CENP-S protein TFIID_20kDa PF03847.13 gi|433639733|ref|YP_007285493.1| - 0.19 12.3 3.7 0.14 12.6 0.8 2.1 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A Hist_deacetyl PF00850.19 gi|433639734|ref|YP_007285494.1| - 2.3e-82 276.9 0.0 3.2e-82 276.5 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain tRNA_NucTransf2 PF09249.11 gi|433639735|ref|YP_007285495.1| - 1e-41 141.7 0.0 1.8e-41 140.9 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|433639735|ref|YP_007285495.1| - 1.1e-15 57.7 0.0 1.8e-15 57.0 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|433639735|ref|YP_007285495.1| - 0.012 15.8 0.0 0.058 13.6 0.0 2.0 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain MoCF_biosynth PF00994.24 gi|433639737|ref|YP_007285497.1| - 1.9e-34 118.4 0.1 2.4e-34 118.1 0.1 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain HTH_38 PF13936.6 gi|433639741|ref|YP_007285501.1| - 0.018 14.8 0.0 0.057 13.2 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|433639741|ref|YP_007285501.1| - 0.077 12.8 0.0 0.32 10.8 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain QueH PF02677.14 gi|433639742|ref|YP_007285502.1| - 0.099 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH STAT2_C PF12188.8 gi|433639742|ref|YP_007285502.1| - 0.1 12.6 1.1 20 5.2 0.0 2.8 3 0 0 3 3 3 0 Signal transducer and activator of transcription 2 C terminal DUF1854 PF08909.11 gi|433639744|ref|YP_007285504.1| - 0.026 14.3 0.1 0.087 12.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) EcoEI_R_C PF08463.10 gi|433639744|ref|YP_007285504.1| - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 EcoEI R protein C-terminal NA37 PF04245.13 gi|433639745|ref|YP_007285505.1| - 5.7e-07 29.3 2.5 1.3e-06 28.1 2.5 1.6 1 1 0 1 1 1 1 37-kD nucleoid-associated bacterial protein RNR_Alpha PF17975.1 gi|433639745|ref|YP_007285505.1| - 0.041 14.4 1.0 0.95 10.0 0.0 3.0 3 1 1 4 4 4 0 Ribonucleotide reductase alpha domain REV1_C PF16727.5 gi|433639745|ref|YP_007285505.1| - 0.13 12.7 0.3 5 7.6 0.1 2.6 2 1 0 2 2 2 0 DNA repair protein REV1 C-terminal domain DinI PF06183.13 gi|433639745|ref|YP_007285505.1| - 0.42 11.0 2.2 44 4.5 0.2 3.5 4 0 0 4 4 4 0 DinI-like family 7TM_GPCR_Str PF10326.9 gi|433639746|ref|YP_007285506.1| - 0.12 11.6 0.6 0.2 11.0 0.6 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str bMG6 PF17962.1 gi|433639747|ref|YP_007285507.1| - 0.04 14.1 0.0 0.51 10.5 0.0 2.4 2 1 0 2 2 2 0 Bacterial macroglobulin domain 6 UPF0242 PF06785.11 gi|433639748|ref|YP_007285508.1| - 0.02 15.0 0.2 0.029 14.5 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TSC22 PF01166.18 gi|433639748|ref|YP_007285508.1| - 0.05 13.9 0.8 0.11 12.8 0.8 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family HTH_20 PF12840.7 gi|433639748|ref|YP_007285508.1| - 0.06 13.4 0.0 2.2 8.4 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain DUF5094 PF17015.5 gi|433639748|ref|YP_007285508.1| - 0.08 13.1 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) bZIP_2 PF07716.15 gi|433639748|ref|YP_007285508.1| - 0.12 12.5 1.7 0.25 11.5 1.7 1.5 1 0 0 1 1 1 0 Basic region leucine zipper Shugoshin_N PF07558.11 gi|433639748|ref|YP_007285508.1| - 0.15 11.9 3.7 0.28 11.1 3.7 1.4 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region DUF2205 PF10224.9 gi|433639748|ref|YP_007285508.1| - 0.24 11.4 1.6 0.27 11.2 0.2 1.8 2 0 0 2 2 2 0 Short coiled-coil protein SlyX PF04102.12 gi|433639748|ref|YP_007285508.1| - 1.4 9.6 5.1 0.48 11.1 0.7 2.4 3 0 0 3 3 3 0 SlyX SWI2_SNF2 PF18766.1 gi|433639749|ref|YP_007285509.1| - 9.2e-25 87.6 1.5 9.2e-25 87.6 1.5 2.6 2 1 0 2 2 2 1 SWI2/SNF2 ATPase ResIII PF04851.15 gi|433639749|ref|YP_007285509.1| - 1.4e-15 57.7 0.0 4.8e-15 56.0 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HSDR_N PF04313.14 gi|433639749|ref|YP_007285509.1| - 2.6e-10 40.6 0.1 2.6e-10 40.6 0.1 2.9 4 0 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|433639749|ref|YP_007285509.1| - 2.8e-08 33.7 0.5 9.2e-08 32.0 0.2 2.0 2 1 0 2 2 2 1 DEAD/DEAH box helicase DUF2161 PF09929.9 gi|433639749|ref|YP_007285509.1| - 0.023 14.8 0.1 0.06 13.5 0.1 1.7 1 0 0 1 1 1 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) DUF87 PF01935.17 gi|433639749|ref|YP_007285509.1| - 0.29 11.2 2.3 0.64 10.1 0.0 2.8 3 0 0 3 3 3 0 Helicase HerA, central domain Methylase_S PF01420.19 gi|433639750|ref|YP_007285510.1| - 9.8e-30 104.0 0.0 8.2e-20 71.7 0.0 2.4 2 1 0 2 2 2 2 Type I restriction modification DNA specificity domain UPF0242 PF06785.11 gi|433639750|ref|YP_007285510.1| - 0.12 12.4 0.2 0.23 11.6 0.0 1.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 gi|433639750|ref|YP_007285510.1| - 0.52 10.6 3.3 2.6 8.3 1.9 2.6 2 1 0 2 2 2 0 Osmosensory transporter coiled coil N6_Mtase PF02384.16 gi|433639751|ref|YP_007285511.1| - 9.3e-63 212.4 0.0 1.9e-62 211.3 0.0 1.5 2 0 0 2 2 2 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|433639751|ref|YP_007285511.1| - 4.2e-24 85.7 1.8 4.2e-24 85.7 1.8 2.9 3 0 0 3 3 3 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|433639751|ref|YP_007285511.1| - 0.12 12.0 0.1 6.8 6.3 0.1 2.9 2 1 0 2 2 2 0 Putative RNA methylase family UPF0020 PIN_4 PF13638.6 gi|433639751|ref|YP_007285511.1| - 0.17 12.2 1.0 0.29 11.4 0.1 1.8 2 0 0 2 2 2 0 PIN domain DUF1053 PF06327.14 gi|433639751|ref|YP_007285511.1| - 0.69 10.5 5.4 0.47 11.0 0.6 3.0 3 1 1 4 4 4 0 Domain of Unknown Function (DUF1053) TrwB_AAD_bind PF10412.9 gi|433639752|ref|YP_007285512.1| - 1.1e-09 37.7 0.4 4.9e-09 35.6 0.4 1.8 1 1 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain T4SS-DNA_transf PF02534.14 gi|433639752|ref|YP_007285512.1| - 7.9e-09 34.8 0.2 2.3e-07 30.0 0.2 2.1 1 1 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer TraG-D_C PF12696.7 gi|433639752|ref|YP_007285512.1| - 0.00011 22.2 0.0 0.00011 22.2 0.0 2.0 2 0 0 2 2 2 1 TraM recognition site of TraD and TraG DUF87 PF01935.17 gi|433639752|ref|YP_007285512.1| - 0.0053 16.9 0.0 0.024 14.8 0.0 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain ATPase_2 PF01637.18 gi|433639752|ref|YP_007285512.1| - 0.0059 16.5 0.0 1.8 8.4 0.0 2.8 2 1 0 3 3 3 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|433639752|ref|YP_007285512.1| - 0.014 15.8 0.0 3.3 8.0 0.0 2.9 2 0 0 2 2 2 0 AAA ATPase domain CbiA PF01656.23 gi|433639752|ref|YP_007285512.1| - 0.035 14.2 0.0 0.13 12.3 0.0 2.0 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain FtsK_SpoIIIE PF01580.18 gi|433639752|ref|YP_007285512.1| - 0.068 12.5 0.0 0.3 10.4 0.0 2.0 2 0 0 2 2 2 0 FtsK/SpoIIIE family NACHT PF05729.12 gi|433639752|ref|YP_007285512.1| - 0.21 11.5 0.0 0.48 10.3 0.0 1.6 1 0 0 1 1 1 0 NACHT domain TraG-D_C PF12696.7 gi|433639754|ref|YP_007285514.1| - 8.2e-05 22.6 0.0 0.0002 21.3 0.0 1.7 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG Zot PF05707.12 gi|433639754|ref|YP_007285514.1| - 0.00098 18.8 0.0 0.071 12.8 0.0 2.3 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_22 PF13401.6 gi|433639754|ref|YP_007285514.1| - 0.0015 18.8 0.5 0.29 11.4 0.1 3.0 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|433639754|ref|YP_007285514.1| - 0.002 18.5 0.3 0.39 11.1 0.1 3.4 3 0 0 3 3 3 1 AAA ATPase domain DUF3487 PF11990.8 gi|433639754|ref|YP_007285514.1| - 0.21 11.5 0.5 0.47 10.3 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) FlgD_ig PF13860.6 gi|433639756|ref|YP_007285516.1| - 0.0044 16.8 0.1 0.012 15.4 0.1 1.8 1 1 0 1 1 1 1 FlgD Ig-like domain LTD PF00932.19 gi|433639756|ref|YP_007285516.1| - 0.029 14.7 0.1 0.12 12.7 0.0 2.0 2 1 1 3 3 3 0 Lamin Tail Domain IncF PF17626.2 gi|433639757|ref|YP_007285517.1| - 0.17 12.2 0.4 0.35 11.3 0.4 1.5 1 0 0 1 1 1 0 Inclusion membrane protein F IATP PF04568.12 gi|433639759|ref|YP_007285519.1| - 0.14 12.6 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP EF-1_beta_acid PF10587.9 gi|433639761|ref|YP_007285521.1| - 0.32 11.5 1.2 0.44 11.0 0.1 1.8 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region Ribosomal_S5 PF00333.20 gi|433639762|ref|YP_007285522.1| - 0.046 13.7 2.1 0.15 12.0 1.1 1.9 1 1 1 2 2 2 0 Ribosomal protein S5, N-terminal domain ATP-synt_B PF00430.18 gi|433639762|ref|YP_007285522.1| - 0.082 13.0 10.2 0.09 12.9 10.2 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) Mitofilin PF09731.9 gi|433639762|ref|YP_007285522.1| - 0.48 9.2 7.5 0.51 9.1 7.5 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF3987 PF13148.6 gi|433639762|ref|YP_007285522.1| - 0.96 8.4 7.7 0.97 8.4 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DNA_pol_B PF00136.21 gi|433639763|ref|YP_007285523.1| - 2.3e-26 92.6 0.0 5.4e-26 91.3 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase family B DUF2399 PF09664.10 gi|433639763|ref|YP_007285523.1| - 0.11 12.4 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) Rad51 PF08423.11 gi|433639765|ref|YP_007285525.1| - 0.00098 18.5 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Rad51 Lactamase_B PF00753.27 gi|433639766|ref|YP_007285526.1| - 8.2e-10 39.0 3.0 2.6e-09 37.4 3.0 1.8 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433639766|ref|YP_007285526.1| - 7.2e-09 35.4 0.6 2.8e-08 33.5 0.6 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain ATPase-cat_bd PF12156.8 gi|433639767|ref|YP_007285527.1| - 0.0078 16.9 0.4 0.013 16.2 0.4 1.4 1 1 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase RPAP2_Rtr1 PF04181.13 gi|433639767|ref|YP_007285527.1| - 0.015 15.6 0.6 0.02 15.2 0.6 1.4 1 1 0 1 1 1 0 Rtr1/RPAP2 family zinc_ribbon_9 PF14369.6 gi|433639767|ref|YP_007285527.1| - 0.095 13.0 8.7 0.18 12.1 0.4 2.5 2 1 0 2 2 2 0 zinc-ribbon SWIM PF04434.17 gi|433639768|ref|YP_007285528.1| - 0.0027 17.3 0.0 0.0047 16.6 0.0 1.4 1 0 0 1 1 1 1 SWIM zinc finger Cupin_3 PF05899.12 gi|433639770|ref|YP_007285530.1| - 0.088 12.5 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Gly-zipper_OmpA PF13436.6 gi|433639772|ref|YP_007285532.1| - 0.015 15.1 14.3 0.021 14.6 14.3 1.2 1 0 0 1 1 1 0 Glycine-zipper domain CNOT11 PF10155.9 gi|433639772|ref|YP_007285532.1| - 0.066 13.4 0.0 0.098 12.8 0.0 1.3 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Oberon_cc PF16312.5 gi|433639772|ref|YP_007285532.1| - 0.13 12.2 2.3 0.2 11.6 2.3 1.2 1 0 0 1 1 1 0 Coiled-coil region of Oberon MarR_2 PF12802.7 gi|433639775|ref|YP_007285535.1| - 1e-05 25.3 0.0 1.6e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|433639775|ref|YP_007285535.1| - 0.0066 16.4 0.1 0.01 15.8 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4423 PF14394.6 gi|433639775|ref|YP_007285535.1| - 0.01 15.5 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HrcA_DNA-bdg PF03444.15 gi|433639775|ref|YP_007285535.1| - 0.035 13.8 0.0 0.045 13.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_20 PF12840.7 gi|433639775|ref|YP_007285535.1| - 0.036 14.1 0.0 0.064 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Mrr_N PF14338.6 gi|433639775|ref|YP_007285535.1| - 0.053 13.7 0.1 0.087 13.0 0.1 1.5 1 1 0 1 1 1 0 Mrr N-terminal domain HTH_45 PF14947.6 gi|433639775|ref|YP_007285535.1| - 0.055 13.5 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_11 PF08279.12 gi|433639775|ref|YP_007285535.1| - 0.078 12.9 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 gi|433639775|ref|YP_007285535.1| - 0.1 12.5 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|433639775|ref|YP_007285535.1| - 0.11 12.7 0.0 0.16 12.2 0.0 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain Dimerisation2 PF16864.5 gi|433639775|ref|YP_007285535.1| - 0.23 11.5 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 Dimerisation domain Phage_int_SAM_1 PF02899.17 gi|433639776|ref|YP_007285536.1| - 4.2e-08 33.4 0.0 1.1e-07 32.0 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_integrase PF00589.22 gi|433639776|ref|YP_007285536.1| - 0.00017 21.4 0.0 0.00077 19.3 0.0 2.1 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|433639776|ref|YP_007285536.1| - 0.028 14.9 0.0 0.38 11.2 0.0 2.3 1 1 1 2 2 2 0 Phage integrase, N-terminal SAM-like domain MFS_3 PF05977.13 gi|433639777|ref|YP_007285537.1| - 3.8e-19 68.5 36.4 1.3e-18 66.7 36.4 1.6 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_1 PF07690.16 gi|433639777|ref|YP_007285537.1| - 2.2e-09 36.7 49.5 1.1e-08 34.4 38.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PT-VENN PF04829.13 gi|433639777|ref|YP_007285537.1| - 2 8.5 6.1 0.44 10.6 0.7 2.8 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif AAA_16 PF13191.6 gi|433639779|ref|YP_007285539.1| - 0.044 14.2 0.2 0.58 10.5 0.0 3.1 2 0 0 2 2 2 0 AAA ATPase domain DUF371 PF04027.13 gi|433639782|ref|YP_007285542.1| - 0.034 14.1 0.0 0.044 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF371) ATP-grasp_6 PF18419.1 gi|433639782|ref|YP_007285542.1| - 0.095 12.3 0.3 3.6 7.3 0.0 2.2 1 1 1 2 2 2 0 ATP-grasp-like domain NERD PF08378.11 gi|433639783|ref|YP_007285543.1| - 2.8e-11 43.8 0.0 4.7e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Nuclease-related domain UvrD_C_2 PF13538.6 gi|433639783|ref|YP_007285543.1| - 9.7e-10 38.1 0.2 2.1e-09 37.1 0.2 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 gi|433639783|ref|YP_007285543.1| - 5e-05 22.8 0.0 9.7e-05 21.9 0.0 1.4 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain ResIII PF04851.15 gi|433639783|ref|YP_007285543.1| - 0.0036 17.3 0.0 0.017 15.2 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|433639783|ref|YP_007285543.1| - 0.0081 16.5 0.0 0.024 15.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 gi|433639783|ref|YP_007285543.1| - 0.11 11.9 0.1 4.2 6.8 0.0 2.3 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain Viral_helicase1 PF01443.18 gi|433639783|ref|YP_007285543.1| - 0.13 11.9 0.0 15 5.2 0.0 2.9 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase baeRF_family6 PF18848.1 gi|433639784|ref|YP_007285544.1| - 0.2 12.0 0.0 0.21 12.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 6 Acetyltransf_3 PF13302.7 gi|433639785|ref|YP_007285545.1| - 5.1e-14 53.1 0.0 7.1e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF2171 PF09939.9 gi|433639786|ref|YP_007285546.1| - 0.065 13.5 0.7 0.49 10.7 0.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) BKACE PF05853.12 gi|433639787|ref|YP_007285547.1| - 4.4e-107 357.5 0.0 4.9e-107 357.3 0.0 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme Cyclase PF04199.13 gi|433639788|ref|YP_007285548.1| - 4.3e-33 114.4 0.3 5.7e-33 114.0 0.3 1.2 1 0 0 1 1 1 1 Putative cyclase ABC_tran PF00005.27 gi|433639789|ref|YP_007285549.1| - 9.1e-33 113.7 0.0 1.4e-32 113.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639789|ref|YP_007285549.1| - 1.4e-09 38.2 0.8 0.00012 22.0 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|433639789|ref|YP_007285549.1| - 0.0012 18.6 0.1 0.0024 17.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|433639789|ref|YP_007285549.1| - 0.0096 15.2 0.0 0.019 14.2 0.0 1.5 2 0 0 2 2 2 1 Zeta toxin AAA_23 PF13476.6 gi|433639789|ref|YP_007285549.1| - 0.01 16.3 0.0 0.016 15.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain BCA_ABC_TP_C PF12399.8 gi|433639789|ref|YP_007285549.1| - 0.02 14.8 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter AAA_16 PF13191.6 gi|433639789|ref|YP_007285549.1| - 0.028 14.8 0.1 0.041 14.2 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|433639789|ref|YP_007285549.1| - 0.028 14.7 0.2 0.52 10.6 0.1 2.3 1 1 1 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|433639789|ref|YP_007285549.1| - 0.075 13.3 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433639789|ref|YP_007285549.1| - 0.093 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 gi|433639789|ref|YP_007285549.1| - 0.095 12.1 0.1 0.79 9.1 0.1 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 gi|433639789|ref|YP_007285549.1| - 0.11 12.6 0.1 0.24 11.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433639789|ref|YP_007285549.1| - 0.12 12.1 0.1 0.2 11.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain MukB PF04310.12 gi|433639789|ref|YP_007285549.1| - 0.15 11.8 0.1 0.48 10.2 0.0 1.7 2 0 0 2 2 2 0 MukB N-terminal NACHT PF05729.12 gi|433639789|ref|YP_007285549.1| - 0.16 11.9 0.9 0.25 11.2 0.1 1.7 2 1 0 2 2 2 0 NACHT domain SbcCD_C PF13558.6 gi|433639789|ref|YP_007285549.1| - 0.17 12.2 1.3 2.2 8.6 1.3 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF3954 PF13128.6 gi|433639789|ref|YP_007285549.1| - 0.17 11.7 0.0 0.48 10.3 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3954) AAA_15 PF13175.6 gi|433639789|ref|YP_007285549.1| - 0.17 11.5 0.0 0.28 10.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|433639789|ref|YP_007285549.1| - 0.19 11.3 0.2 0.31 10.6 0.2 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 gi|433639790|ref|YP_007285550.1| - 1.2e-28 100.3 0.0 1.6e-28 100.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 gi|433639790|ref|YP_007285550.1| - 2.2e-07 30.7 0.2 5.1e-07 29.5 0.2 1.7 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 gi|433639790|ref|YP_007285550.1| - 1.2e-05 25.3 2.3 8.4e-05 22.5 0.1 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|433639790|ref|YP_007285550.1| - 0.0023 17.5 2.9 0.079 12.5 0.5 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|433639790|ref|YP_007285550.1| - 0.0043 17.6 0.1 0.0072 16.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433639790|ref|YP_007285550.1| - 0.0077 16.0 0.1 0.012 15.3 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433639790|ref|YP_007285550.1| - 0.0092 15.7 0.1 0.016 14.9 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|433639790|ref|YP_007285550.1| - 0.018 15.1 0.1 0.083 13.0 0.0 2.1 1 1 1 2 2 2 0 50S ribosome-binding GTPase AAA PF00004.29 gi|433639790|ref|YP_007285550.1| - 0.025 15.0 0.1 0.21 12.0 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|433639790|ref|YP_007285550.1| - 0.052 13.0 0.9 0.9 8.9 0.2 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 gi|433639790|ref|YP_007285550.1| - 0.083 12.2 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin SbcCD_C PF13558.6 gi|433639790|ref|YP_007285550.1| - 0.11 12.8 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 gi|433639790|ref|YP_007285550.1| - 0.12 12.4 0.2 3.3 7.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|433639790|ref|YP_007285550.1| - 0.12 11.5 1.8 7 5.7 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.14 gi|433639790|ref|YP_007285550.1| - 0.12 12.3 0.1 1.3 9.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|433639790|ref|YP_007285550.1| - 0.16 12.3 1.7 0.81 10.0 1.7 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|433639790|ref|YP_007285550.1| - 0.17 11.8 0.2 0.29 11.0 0.2 1.3 1 0 0 1 1 1 0 RsgA GTPase BPD_transp_2 PF02653.16 gi|433639791|ref|YP_007285551.1| - 8.9e-40 136.5 32.9 1.2e-39 136.1 32.9 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|433639792|ref|YP_007285552.1| - 7.7e-28 97.4 39.8 9.1e-28 97.2 39.8 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.6 gi|433639793|ref|YP_007285553.1| - 2.7e-49 168.7 1.9 3.3e-49 168.4 1.9 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 gi|433639793|ref|YP_007285553.1| - 6.1e-09 35.3 0.0 6.1e-07 28.8 0.0 2.1 2 0 0 2 2 2 2 Periplasmic binding protein domain TAT_signal PF10518.9 gi|433639793|ref|YP_007285553.1| - 0.0014 18.4 1.7 0.0031 17.3 1.7 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence ANF_receptor PF01094.28 gi|433639793|ref|YP_007285553.1| - 0.0024 17.0 0.0 0.0079 15.3 0.0 1.7 2 0 0 2 2 2 1 Receptor family ligand binding region UCR_Fe-S_N PF10399.9 gi|433639793|ref|YP_007285553.1| - 0.086 12.2 0.4 0.2 11.0 0.4 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RHH_1 PF01402.21 gi|433639794|ref|YP_007285554.1| - 1.6e-07 31.0 0.0 3.5e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family Par3_HAL_N_term PF12053.8 gi|433639794|ref|YP_007285554.1| - 0.0084 16.3 0.1 0.015 15.5 0.1 1.4 1 0 0 1 1 1 1 N-terminal of Par3 and HAL proteins RHH_3 PF12651.7 gi|433639794|ref|YP_007285554.1| - 0.031 14.2 0.0 0.06 13.3 0.0 1.5 1 0 0 1 1 1 0 Ribbon-helix-helix domain B_solenoid_ydck PF18836.1 gi|433639794|ref|YP_007285554.1| - 0.044 13.7 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 Beta solenoid repeat from YDCK PSK_trans_fac PF07704.11 gi|433639794|ref|YP_007285554.1| - 0.11 13.3 0.2 0.19 12.5 0.2 1.5 1 0 0 1 1 1 0 Rv0623-like transcription factor BsuBI_PstI_RE_N PF17728.1 gi|433639795|ref|YP_007285555.1| - 0.0091 15.9 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 BsuBI/PstI restriction endonuclease HTH domain FUR PF01475.19 gi|433639795|ref|YP_007285555.1| - 0.18 12.0 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family DUF21 PF01595.20 gi|433639797|ref|YP_007285557.1| - 6.6e-24 84.6 0.0 8.9e-24 84.1 0.0 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 gi|433639797|ref|YP_007285557.1| - 1.4e-12 47.9 0.7 1e-09 38.7 0.1 2.4 2 0 0 2 2 2 2 CBS domain AAA_21 PF13304.6 gi|433639798|ref|YP_007285558.1| - 5.1e-06 26.5 0.1 0.046 13.5 0.2 2.5 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 gi|433639798|ref|YP_007285558.1| - 6.6e-05 22.6 0.0 6.6e-05 22.6 0.0 3.6 4 1 0 4 4 4 1 AAA domain Snapin_Pallidin PF14712.6 gi|433639798|ref|YP_007285558.1| - 0.00099 19.5 1.7 0.22 12.0 0.0 3.9 4 0 0 4 4 3 1 Snapin/Pallidin FlaC_arch PF05377.11 gi|433639798|ref|YP_007285558.1| - 0.0068 16.8 0.8 2.3 8.7 0.0 4.2 4 0 0 4 4 4 1 Flagella accessory protein C (FlaC) AAA_23 PF13476.6 gi|433639798|ref|YP_007285558.1| - 0.03 14.8 13.9 0.042 14.4 0.0 3.9 3 1 0 3 3 2 0 AAA domain AAA_15 PF13175.6 gi|433639798|ref|YP_007285558.1| - 0.046 13.4 0.0 0.19 11.4 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AKNA PF12443.8 gi|433639798|ref|YP_007285558.1| - 0.048 14.3 0.4 0.29 11.8 0.1 2.3 2 0 0 2 2 2 0 AT-hook-containing transcription factor AAA_29 PF13555.6 gi|433639798|ref|YP_007285558.1| - 0.055 13.2 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran_CTD PF16326.5 gi|433639798|ref|YP_007285558.1| - 0.093 13.0 0.2 0.093 13.0 0.2 6.5 4 2 2 6 6 6 0 ABC transporter C-terminal domain SMC_N PF02463.19 gi|433639798|ref|YP_007285558.1| - 0.1 12.0 0.0 2.7 7.4 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain CENP-K PF11802.8 gi|433639798|ref|YP_007285558.1| - 0.11 12.0 0.3 0.29 10.7 0.3 1.8 1 0 0 1 1 1 0 Centromere-associated protein K DUF16 PF01519.16 gi|433639798|ref|YP_007285558.1| - 0.22 12.0 3.9 11 6.5 0.3 3.4 3 0 0 3 3 3 0 Protein of unknown function DUF16 PDE4_UCR PF18100.1 gi|433639798|ref|YP_007285558.1| - 0.83 10.3 4.8 17 6.1 0.5 2.6 2 0 0 2 2 2 0 Phosphodiesterase 4 upstream conserved regions (UCR) PHM7_cyt PF14703.6 gi|433639798|ref|YP_007285558.1| - 0.96 9.7 8.1 6.2 7.0 0.4 3.9 3 1 1 4 4 4 0 Cytosolic domain of 10TM putative phosphate transporter Alpha-2-MRAP_C PF06401.11 gi|433639798|ref|YP_007285558.1| - 1.2 9.1 7.0 0.49 10.3 0.6 3.1 3 0 0 3 3 3 0 Alpha-2-macroglobulin RAP, C-terminal domain Spc7 PF08317.11 gi|433639798|ref|YP_007285558.1| - 1.5 7.6 34.2 0.54 9.1 0.1 4.4 4 1 1 5 5 5 0 Spc7 kinetochore protein NPV_P10 PF05531.12 gi|433639798|ref|YP_007285558.1| - 2 8.9 6.2 41 4.7 0.0 4.2 4 1 0 4 4 3 0 Nucleopolyhedrovirus P10 protein XhlA PF10779.9 gi|433639798|ref|YP_007285558.1| - 2.2 8.5 21.5 2 8.7 0.6 5.1 5 0 0 5 5 5 0 Haemolysin XhlA Exonuc_VII_L PF02601.15 gi|433639798|ref|YP_007285558.1| - 8 5.9 22.8 13 5.3 5.1 3.3 2 2 0 2 2 2 0 Exonuclease VII, large subunit Metallophos PF00149.28 gi|433639799|ref|YP_007285559.1| - 3e-12 47.5 1.7 1.2e-11 45.5 1.7 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|433639799|ref|YP_007285559.1| - 2.7e-10 40.7 0.0 5.3e-10 39.7 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Polyketide_cyc PF03364.20 gi|433639800|ref|YP_007285560.1| - 8.4e-05 22.8 0.0 0.00016 21.8 0.0 1.4 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|433639800|ref|YP_007285560.1| - 0.00017 21.9 0.3 0.00022 21.5 0.3 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport FtsJ PF01728.19 gi|433639801|ref|YP_007285561.1| - 1.2e-50 172.1 0.0 1.4e-50 171.9 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRAM PF01938.20 gi|433639801|ref|YP_007285561.1| - 1.7e-10 40.7 0.3 5.3e-10 39.1 0.3 1.9 1 0 0 1 1 1 1 TRAM domain Methyltransf_31 PF13847.6 gi|433639801|ref|YP_007285561.1| - 3.4e-05 23.7 0.0 0.0001 22.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|433639801|ref|YP_007285561.1| - 0.0037 17.9 0.1 0.01 16.5 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433639801|ref|YP_007285561.1| - 0.013 15.3 0.0 0.018 14.9 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|433639801|ref|YP_007285561.1| - 0.041 13.6 0.0 0.13 12.0 0.0 1.7 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 gi|433639801|ref|YP_007285561.1| - 0.12 12.0 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F RHH_8 PF17723.1 gi|433639802|ref|YP_007285562.1| - 0.00038 20.6 0.0 0.00038 20.6 0.0 1.1 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family RHH_1 PF01402.21 gi|433639802|ref|YP_007285562.1| - 0.00041 20.2 0.3 0.001 19.0 0.1 1.7 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family TatC PF00902.18 gi|433639803|ref|YP_007285563.1| - 2e-72 243.4 50.6 7.5e-41 140.2 18.9 2.9 3 0 0 3 3 3 2 Sec-independent protein translocase protein (TatC) TatC PF00902.18 gi|433639804|ref|YP_007285564.1| - 9e-37 126.9 16.1 1.1e-36 126.6 16.1 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) DHHC PF01529.20 gi|433639804|ref|YP_007285564.1| - 0.58 10.3 4.0 0.59 10.2 1.4 2.0 2 0 0 2 2 2 0 DHHC palmitoyltransferase DUF543 PF04418.12 gi|433639805|ref|YP_007285565.1| - 0.12 12.3 0.0 14 5.8 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF543) Bacteriocin_IIc PF10439.9 gi|433639805|ref|YP_007285565.1| - 5.9 7.1 9.2 45 4.3 6.8 2.9 2 1 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide Epimerase PF01370.21 gi|433639806|ref|YP_007285566.1| - 8.6e-60 202.2 0.3 1e-59 201.9 0.3 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|433639806|ref|YP_007285566.1| - 8.2e-53 179.9 0.0 2.4e-52 178.4 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|433639806|ref|YP_007285566.1| - 1.6e-18 66.7 0.0 2.4e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|433639806|ref|YP_007285566.1| - 1.2e-15 57.4 0.4 4.4e-14 52.3 0.3 2.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|433639806|ref|YP_007285566.1| - 3.9e-13 49.2 1.0 4.7e-13 48.9 1.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|433639806|ref|YP_007285566.1| - 8.9e-10 38.8 0.9 1.5e-09 38.0 0.9 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|433639806|ref|YP_007285566.1| - 2.5e-06 26.9 0.1 0.0008 18.7 0.1 2.4 2 1 0 2 2 2 2 Male sterility protein NmrA PF05368.13 gi|433639806|ref|YP_007285566.1| - 0.0076 15.8 0.7 0.017 14.6 0.7 1.6 1 1 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|433639806|ref|YP_007285566.1| - 0.011 15.2 0.2 0.02 14.4 0.2 1.5 1 1 0 1 1 1 0 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|433639806|ref|YP_007285566.1| - 0.019 15.2 0.3 0.11 12.7 0.3 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|433639806|ref|YP_007285566.1| - 0.038 14.1 0.1 0.071 13.2 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Ldh_1_N PF00056.23 gi|433639806|ref|YP_007285566.1| - 0.14 12.3 0.3 0.25 11.4 0.3 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain KR PF08659.10 gi|433639806|ref|YP_007285566.1| - 0.17 11.8 6.0 3.3 7.6 3.6 2.9 2 1 0 2 2 2 0 KR domain DUF354 PF04007.12 gi|433639807|ref|YP_007285567.1| - 2.2e-09 36.9 0.0 4.9e-09 35.7 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF354) CPSase_L_D2 PF02786.17 gi|433639808|ref|YP_007285568.1| - 3.1e-10 39.9 0.0 0.00055 19.5 0.0 2.1 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|433639808|ref|YP_007285568.1| - 6.1e-07 29.6 0.0 8.8e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|433639808|ref|YP_007285568.1| - 9.2e-07 28.7 0.0 1.8e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 gi|433639808|ref|YP_007285568.1| - 0.0036 16.9 0.0 0.064 12.8 0.0 2.1 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 gi|433639808|ref|YP_007285568.1| - 0.022 14.3 0.0 0.081 12.5 0.0 1.9 2 1 0 2 2 2 0 ATP-grasp domain ATPgrasp_TupA PF14305.6 gi|433639808|ref|YP_007285568.1| - 0.27 11.0 0.0 0.44 10.3 0.0 1.2 1 0 0 1 1 1 0 TupA-like ATPgrasp Hexapep PF00132.24 gi|433639809|ref|YP_007285569.1| - 2.9e-12 45.8 2.0 1.3e-07 31.1 1.7 3.2 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433639809|ref|YP_007285569.1| - 6.9e-10 38.5 3.7 1.6e-06 27.7 2.0 3.1 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Polysacc_deac_1 PF01522.21 gi|433639810|ref|YP_007285570.1| - 1.7e-13 50.6 0.1 1.6e-12 47.4 0.0 2.1 2 0 0 2 2 2 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|433639810|ref|YP_007285570.1| - 0.0011 18.2 0.0 0.0019 17.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glycos_transf_2 PF00535.26 gi|433639811|ref|YP_007285571.1| - 2.4e-19 69.8 0.2 4.9e-17 62.3 0.2 2.2 1 1 0 1 1 1 1 Glycosyl transferase family 2 UDPG_MGDP_dh_N PF03721.14 gi|433639812|ref|YP_007285572.1| - 1.5e-36 125.7 0.1 4e-36 124.3 0.0 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|433639812|ref|YP_007285572.1| - 6.4e-25 87.2 0.0 1.1e-24 86.4 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|433639812|ref|YP_007285572.1| - 9.7e-16 58.1 0.0 2.2e-15 57.0 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|433639812|ref|YP_007285572.1| - 4.8e-06 26.8 0.0 1.4e-05 25.3 0.0 1.8 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|433639812|ref|YP_007285572.1| - 0.00033 20.7 0.0 0.0079 16.2 0.0 2.3 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|433639812|ref|YP_007285572.1| - 0.00043 19.9 0.0 0.00096 18.8 0.0 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DUF3856 PF12968.7 gi|433639812|ref|YP_007285572.1| - 0.015 15.4 0.3 0.067 13.3 0.1 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF3856) 3HCDH_N PF02737.18 gi|433639812|ref|YP_007285572.1| - 0.027 14.4 0.0 0.13 12.1 0.0 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|433639812|ref|YP_007285572.1| - 0.029 13.7 0.0 0.055 12.8 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|433639812|ref|YP_007285572.1| - 0.053 13.8 0.0 0.22 11.8 0.0 2.2 1 1 0 1 1 1 0 TrkA-N domain Rossmann-like PF10727.9 gi|433639812|ref|YP_007285572.1| - 0.15 12.0 0.6 0.62 9.9 0.6 2.2 1 1 0 1 1 1 0 Rossmann-like domain SIS PF01380.22 gi|433639813|ref|YP_007285573.1| - 6.9e-47 158.6 0.3 1.1e-23 83.5 0.6 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|433639813|ref|YP_007285573.1| - 1.4e-17 64.1 0.3 1.4e-17 64.1 0.3 2.4 2 1 1 3 3 3 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|433639813|ref|YP_007285573.1| - 3.1e-15 56.1 0.0 2.7e-11 43.5 0.0 2.3 2 0 0 2 2 2 2 Glutamine amidotransferase domain NTP_transferase PF00483.23 gi|433639814|ref|YP_007285574.1| - 7.2e-32 110.9 0.0 8.6e-32 110.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433639814|ref|YP_007285574.1| - 4.4e-16 59.7 1.7 7.6e-16 58.9 1.7 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|433639814|ref|YP_007285574.1| - 1.4e-09 37.3 13.1 2.4e-06 27.0 1.3 4.7 3 1 3 6 6 6 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|433639814|ref|YP_007285574.1| - 3e-06 26.9 12.8 0.00021 21.0 0.6 3.7 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|433639814|ref|YP_007285574.1| - 0.0063 16.3 0.1 0.015 15.1 0.1 1.7 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF347 PF03988.12 gi|433639814|ref|YP_007285574.1| - 0.11 12.7 3.5 0.32 11.2 3.5 1.7 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) Fucokinase PF07959.12 gi|433639814|ref|YP_007285574.1| - 0.14 11.1 0.0 0.22 10.4 0.0 1.2 1 0 0 1 1 1 0 L-fucokinase Big_3_5 PF16640.5 gi|433639815|ref|YP_007285575.1| - 0.0014 18.7 30.2 0.0066 16.6 8.3 3.9 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 3) MG4 PF17789.1 gi|433639815|ref|YP_007285575.1| - 0.0074 16.4 1.7 6.6 7.0 0.0 3.7 3 0 0 3 3 3 1 Macroglobulin domain MG4 SdrD_B PF17210.3 gi|433639815|ref|YP_007285575.1| - 0.0099 16.1 1.4 0.9 9.8 0.9 3.1 2 0 0 2 2 2 1 SdrD B-like domain CBM60 PF16841.5 gi|433639815|ref|YP_007285575.1| - 0.013 15.9 3.2 0.2 12.1 0.8 3.4 4 0 0 4 4 4 0 Ca-dependent carbohydrate-binding module xylan-binding DUF4129 PF13559.6 gi|433639815|ref|YP_007285575.1| - 0.017 15.4 4.2 0.017 15.4 4.2 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4129) OmpH PF03938.14 gi|433639815|ref|YP_007285575.1| - 0.16 12.3 3.3 0.3 11.4 3.3 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ABC_tran_CTD PF16326.5 gi|433639815|ref|YP_007285575.1| - 0.9 9.8 6.7 3.4 8.0 6.7 2.0 1 0 0 1 1 1 0 ABC transporter C-terminal domain GT87 PF09594.10 gi|433639815|ref|YP_007285575.1| - 1.4 8.5 5.5 3 7.5 0.2 2.2 2 0 0 2 2 2 0 Glycosyltransferase family 87 Glyco_hydro_79C PF16862.5 gi|433639815|ref|YP_007285575.1| - 5.1 8.0 7.6 5.1 8.0 4.4 2.5 2 0 0 2 2 2 0 Glycosyl hydrolase family 79 C-terminal beta domain DUF58 PF01882.18 gi|433639816|ref|YP_007285576.1| - 4.6e-24 84.5 0.2 1.6e-23 82.8 0.2 2.0 1 0 0 1 1 1 1 Protein of unknown function DUF58 AAA_3 PF07726.11 gi|433639819|ref|YP_007285579.1| - 2.5e-60 202.0 0.2 4.2e-60 201.3 0.2 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|433639819|ref|YP_007285579.1| - 1.6e-17 63.8 0.0 2.7e-17 63.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_2 PF17863.1 gi|433639819|ref|YP_007285579.1| - 3.3e-17 62.1 1.0 6.9e-17 61.1 1.0 1.6 1 0 0 1 1 1 1 AAA lid domain MCM PF00493.23 gi|433639819|ref|YP_007285579.1| - 4.3e-07 29.3 0.0 9.6e-07 28.1 0.0 1.5 2 0 0 2 2 2 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|433639819|ref|YP_007285579.1| - 4.9e-05 23.1 0.1 0.00092 19.0 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|433639819|ref|YP_007285579.1| - 6.3e-05 22.8 0.1 0.00093 19.0 0.1 2.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 gi|433639819|ref|YP_007285579.1| - 0.00016 22.1 0.0 0.00046 20.6 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|433639819|ref|YP_007285579.1| - 0.00031 20.2 0.3 0.21 10.9 0.1 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|433639819|ref|YP_007285579.1| - 0.0081 16.6 0.2 0.018 15.5 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain DUF4350 PF14258.6 gi|433639820|ref|YP_007285580.1| - 4.4e-05 23.8 3.8 8.6e-05 22.9 0.3 3.0 2 1 0 2 2 2 1 Domain of unknown function (DUF4350) DUF4235 PF14019.6 gi|433639820|ref|YP_007285580.1| - 0.054 13.6 4.5 2.6 8.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) ABC_transp_aux PF09822.9 gi|433639820|ref|YP_007285580.1| - 0.11 11.9 0.0 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 ABC-type uncharacterized transport system PCNA_N PF00705.18 gi|433639821|ref|YP_007285581.1| - 1.7e-09 37.5 0.1 3.1e-09 36.6 0.1 1.5 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|433639821|ref|YP_007285581.1| - 0.00028 21.1 0.0 0.00094 19.4 0.0 2.0 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|433639821|ref|YP_007285581.1| - 0.026 13.6 0.0 2.1 7.3 0.0 2.1 1 1 0 2 2 2 0 Repair protein Rad1/Rec1/Rad17 Cupin_2 PF07883.11 gi|433639823|ref|YP_007285583.1| - 2.4e-08 33.6 0.2 4.1e-08 32.8 0.0 1.5 2 0 0 2 2 2 1 Cupin domain Pirin_C_2 PF17954.1 gi|433639823|ref|YP_007285583.1| - 1.6e-05 25.0 0.0 2.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Cupin_3 PF05899.12 gi|433639823|ref|YP_007285583.1| - 0.0018 17.9 0.0 0.0042 16.7 0.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|433639823|ref|YP_007285583.1| - 0.057 13.3 0.0 0.084 12.8 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain HutD PF05962.11 gi|433639823|ref|YP_007285583.1| - 0.065 13.2 0.0 0.082 12.9 0.0 1.2 1 0 0 1 1 1 0 HutD FAD_binding_7 PF03441.14 gi|433639824|ref|YP_007285584.1| - 1.5e-78 263.0 1.4 1.9e-78 262.6 1.4 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 gi|433639824|ref|YP_007285584.1| - 1.9e-41 141.8 0.0 5.8e-41 140.2 0.0 1.8 1 0 0 1 1 1 1 DNA photolyase Usp PF00582.26 gi|433639824|ref|YP_007285584.1| - 0.023 15.2 0.0 0.066 13.7 0.0 1.8 1 0 0 1 1 1 0 Universal stress protein family SNF PF00209.18 gi|433639825|ref|YP_007285585.1| - 5.4e-51 173.9 27.8 1e-27 97.0 14.1 2.0 2 0 0 2 2 2 2 Sodium:neurotransmitter symporter family YiiD_C PF09500.10 gi|433639825|ref|YP_007285585.1| - 0.029 14.2 0.7 0.052 13.4 0.7 1.3 1 0 0 1 1 1 0 Putative thioesterase (yiiD_Cterm) UPF0126 PF03458.13 gi|433639826|ref|YP_007285586.1| - 5.3e-28 96.7 39.6 9.3e-16 57.5 14.0 3.0 2 1 1 3 3 3 2 UPF0126 domain MFS_1 PF07690.16 gi|433639827|ref|YP_007285587.1| - 3.6e-38 131.4 40.6 1.2e-19 70.5 11.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|433639827|ref|YP_007285587.1| - 1.4e-07 30.8 17.6 0.0021 17.0 4.7 3.4 3 1 0 3 3 3 3 MFS_1 like family S1FA PF04689.13 gi|433639827|ref|YP_007285587.1| - 1.4 9.1 3.1 22 5.3 0.2 2.9 3 0 0 3 3 3 0 DNA binding protein S1FA HTH_10 PF04967.12 gi|433639828|ref|YP_007285588.1| - 1.9e-20 72.4 0.5 3.4e-20 71.6 0.5 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|433639828|ref|YP_007285588.1| - 0.0094 15.5 0.0 0.026 14.1 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|433639828|ref|YP_007285588.1| - 0.037 13.8 0.1 0.096 12.5 0.1 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain CheY-binding PF09078.11 gi|433639828|ref|YP_007285588.1| - 0.046 13.8 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 CheY binding HTH_10 PF04967.12 gi|433639829|ref|YP_007285589.1| - 2.2e-19 69.0 0.4 1.2e-18 66.6 0.0 2.3 3 0 0 3 3 2 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|433639829|ref|YP_007285589.1| - 0.0012 18.3 0.1 0.0062 16.0 0.1 2.3 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|433639829|ref|YP_007285589.1| - 0.0013 18.3 0.5 0.031 14.0 0.5 2.5 1 1 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433639829|ref|YP_007285589.1| - 0.0016 18.3 0.1 0.0072 16.2 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 gi|433639829|ref|YP_007285589.1| - 0.0017 18.1 0.2 0.036 13.9 0.0 2.5 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|433639829|ref|YP_007285589.1| - 0.0019 17.7 0.0 0.005 16.4 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PuR_N PF09182.10 gi|433639829|ref|YP_007285589.1| - 0.0033 17.3 0.0 0.0066 16.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial purine repressor, N-terminal MarR PF01047.22 gi|433639829|ref|YP_007285589.1| - 0.0044 16.9 0.0 0.19 11.7 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|433639829|ref|YP_007285589.1| - 0.0048 16.9 0.3 0.014 15.5 0.3 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|433639829|ref|YP_007285589.1| - 0.0076 16.4 0.0 0.017 15.3 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain NYD-SP28 PF14772.6 gi|433639829|ref|YP_007285589.1| - 0.044 13.8 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 Sperm tail HTH_Tnp_Tc3_2 PF01498.18 gi|433639829|ref|YP_007285589.1| - 0.046 14.0 0.0 5.1 7.4 0.0 2.9 3 0 0 3 3 3 0 Transposase HTH_AsnC-type PF13404.6 gi|433639829|ref|YP_007285589.1| - 0.071 12.9 0.4 0.55 10.1 0.1 2.5 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|433639829|ref|YP_007285589.1| - 0.074 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease BAT PF15915.5 gi|433639829|ref|YP_007285589.1| - 0.13 12.1 9.6 0.095 12.6 4.4 2.8 2 1 0 2 2 2 0 GAF and HTH_10 associated domain Phage_CI_repr PF07022.13 gi|433639829|ref|YP_007285589.1| - 0.17 12.0 0.2 0.47 10.6 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain DUF2249 PF10006.9 gi|433639830|ref|YP_007285590.1| - 7e-26 89.9 0.7 7.7e-26 89.8 0.7 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) DUF2249 PF10006.9 gi|433639831|ref|YP_007285591.1| - 1.8e-13 50.1 0.7 2.3e-13 49.8 0.7 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) TusA PF01206.17 gi|433639831|ref|YP_007285591.1| - 0.0039 17.0 0.0 0.0055 16.5 0.0 1.2 1 0 0 1 1 1 1 Sulfurtransferase TusA UbiA PF01040.18 gi|433639832|ref|YP_007285592.1| - 1.8e-51 174.9 29.2 1.8e-51 174.9 29.2 2.7 2 1 0 2 2 2 1 UbiA prenyltransferase family DUF998 PF06197.13 gi|433639832|ref|YP_007285592.1| - 0.011 15.4 17.9 0.011 15.4 17.9 5.0 2 2 1 4 4 4 0 Protein of unknown function (DUF998) DUF4337 PF14235.6 gi|433639832|ref|YP_007285592.1| - 0.14 12.2 3.2 0.14 12.2 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) DUF3482 PF11981.8 gi|433639832|ref|YP_007285592.1| - 2.6 7.4 5.9 11 5.3 1.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3482) COX2 PF00116.20 gi|433639834|ref|YP_007285594.1| - 0.00028 20.7 0.0 0.00038 20.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain T2SSM PF04612.12 gi|433639834|ref|YP_007285594.1| - 0.091 12.8 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M COX1 PF00115.20 gi|433639835|ref|YP_007285595.1| - 1.1e-51 176.0 69.7 1.1e-51 176.0 69.7 1.7 1 1 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I TMEM171 PF15471.6 gi|433639835|ref|YP_007285595.1| - 1.1 8.2 3.3 0.55 9.2 0.2 2.0 2 0 0 2 2 2 0 Transmembrane protein family 171 Big_7 PF17957.1 gi|433639836|ref|YP_007285596.1| - 0.037 14.8 0.0 0.11 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial Ig domain E1-E2_ATPase PF00122.20 gi|433639837|ref|YP_007285597.1| - 4.3e-42 143.7 2.7 1e-41 142.4 2.7 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433639837|ref|YP_007285597.1| - 6.2e-33 114.9 10.2 4.7e-32 112.0 10.2 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433639837|ref|YP_007285597.1| - 2.3e-08 34.3 0.0 1.1e-07 32.2 0.0 2.2 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|433639837|ref|YP_007285597.1| - 0.00055 19.7 0.2 0.00093 19.0 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ATPase-cat_bd PF12156.8 gi|433639837|ref|YP_007285597.1| - 0.031 15.0 0.0 0.074 13.8 0.0 1.6 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DUF5096 PF17019.5 gi|433639837|ref|YP_007285597.1| - 0.33 10.7 0.1 0.54 10.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) DUF3054 PF11255.8 gi|433639838|ref|YP_007285598.1| - 8.2e-17 61.7 12.2 1e-16 61.4 12.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3054) CoA_binding_3 PF13727.6 gi|433639838|ref|YP_007285598.1| - 0.00052 20.1 1.7 0.00083 19.4 1.7 1.3 1 0 0 1 1 1 1 CoA-binding domain DUF2070 PF09843.9 gi|433639838|ref|YP_007285598.1| - 0.046 12.0 2.0 0.056 11.7 2.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Peptidase_U4 PF03419.13 gi|433639838|ref|YP_007285598.1| - 0.13 11.5 1.1 0.17 11.2 1.1 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA CPP1-like PF11833.8 gi|433639838|ref|YP_007285598.1| - 1 9.0 3.1 1.1 8.9 3.1 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Cu-oxidase_3 PF07732.15 gi|433639839|ref|YP_007285599.1| - 1.6e-13 50.7 0.1 1.1e-11 44.8 0.0 2.4 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 gi|433639839|ref|YP_007285599.1| - 8.8e-11 41.7 1.3 1.8e-07 31.0 0.3 3.1 2 1 0 2 2 2 2 Multicopper oxidase Cupredoxin_1 PF13473.6 gi|433639839|ref|YP_007285599.1| - 0.0005 20.2 0.0 0.0081 16.3 0.0 2.7 3 1 1 4 4 4 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|433639839|ref|YP_007285599.1| - 0.034 14.6 0.6 0.14 12.6 0.1 2.3 2 2 1 3 3 3 0 Copper binding proteins, plastocyanin/azurin family Copper-bind PF00127.20 gi|433639840|ref|YP_007285600.1| - 2e-05 24.9 0.0 2.7e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family SCO1-SenC PF02630.14 gi|433639841|ref|YP_007285601.1| - 2e-15 56.9 3.3 2.5e-14 53.4 0.8 2.1 2 0 0 2 2 2 2 SCO1/SenC Redoxin PF08534.10 gi|433639842|ref|YP_007285602.1| - 2.7e-11 43.4 0.0 3.4e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|433639842|ref|YP_007285602.1| - 2.5e-06 27.4 0.0 3.2e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family TraF PF13728.6 gi|433639842|ref|YP_007285602.1| - 0.021 14.6 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein SCO1-SenC PF02630.14 gi|433639842|ref|YP_007285602.1| - 0.021 14.7 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 SCO1/SenC Thioredoxin_2 PF13098.6 gi|433639842|ref|YP_007285602.1| - 0.23 11.9 0.0 0.37 11.2 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain Zn-ribbon_8 PF09723.10 gi|433639843|ref|YP_007285603.1| - 5.9e-06 26.3 0.4 6.9e-06 26.1 0.4 1.1 1 0 0 1 1 1 1 Zinc ribbon domain Sgf11 PF08209.11 gi|433639843|ref|YP_007285603.1| - 3.5e-05 23.2 0.2 0.025 14.2 0.0 2.1 2 0 0 2 2 2 2 Sgf11 (transcriptional regulation protein) Prok-RING_4 PF14447.6 gi|433639843|ref|YP_007285603.1| - 0.00014 21.6 0.7 0.086 12.7 0.1 2.1 2 0 0 2 2 2 2 Prokaryotic RING finger family 4 TF_Zn_Ribbon PF08271.12 gi|433639843|ref|YP_007285603.1| - 0.00019 20.8 0.9 0.013 15.0 0.0 2.1 2 0 0 2 2 2 1 TFIIB zinc-binding zf-Di19 PF05605.12 gi|433639843|ref|YP_007285603.1| - 0.00084 19.6 2.0 0.29 11.5 2.0 2.1 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf_Rg PF17915.1 gi|433639843|ref|YP_007285603.1| - 0.00093 18.5 0.5 0.13 11.6 0.1 2.1 2 0 0 2 2 2 1 Reverse gyrase zinc finger zf-C3HC4_3 PF13920.6 gi|433639843|ref|YP_007285603.1| - 0.0011 18.7 0.6 1.3 8.9 0.1 2.0 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf_UBZ PF18439.1 gi|433639843|ref|YP_007285603.1| - 0.0014 18.2 0.9 0.13 11.9 0.1 2.1 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger DZR PF12773.7 gi|433639843|ref|YP_007285603.1| - 0.0014 18.6 0.4 0.0017 18.4 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon YacG PF03884.14 gi|433639843|ref|YP_007285603.1| - 0.0057 16.4 1.1 1.6 8.5 0.1 2.1 2 0 0 2 2 2 2 DNA gyrase inhibitor YacG DNA_ligase_ZBD PF03119.16 gi|433639843|ref|YP_007285603.1| - 0.0078 16.2 2.7 0.36 10.9 0.1 2.2 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain zf-ribbon_3 PF13248.6 gi|433639843|ref|YP_007285603.1| - 0.01 15.2 3.3 0.11 12.0 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain RNHCP PF12647.7 gi|433639843|ref|YP_007285603.1| - 0.01 15.8 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain CpXC PF14353.6 gi|433639843|ref|YP_007285603.1| - 0.012 15.7 0.8 0.026 14.6 0.8 1.6 1 1 0 1 1 1 0 CpXC protein zf-LITAF-like PF10601.9 gi|433639843|ref|YP_007285603.1| - 0.014 15.6 0.3 0.22 11.8 0.0 2.0 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Acetone_carb_G PF08882.11 gi|433639843|ref|YP_007285603.1| - 0.014 15.5 0.6 0.042 14.0 0.1 1.7 1 1 1 2 2 2 0 Acetone carboxylase gamma subunit zf-DNA_Pol PF08996.10 gi|433639843|ref|YP_007285603.1| - 0.022 14.5 0.3 0.022 14.5 0.3 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Elf1 PF05129.13 gi|433639843|ref|YP_007285603.1| - 0.023 14.7 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF2367 PF10164.9 gi|433639843|ref|YP_007285603.1| - 0.024 15.1 0.9 0.048 14.2 0.9 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) ADD_ATRX PF17981.1 gi|433639843|ref|YP_007285603.1| - 0.025 14.5 0.4 0.042 13.7 0.0 1.6 1 1 1 2 2 2 0 Cysteine Rich ADD domain UPF0547 PF10571.9 gi|433639843|ref|YP_007285603.1| - 0.026 14.6 2.3 1.4 9.1 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Prok-RING_1 PF14446.6 gi|433639843|ref|YP_007285603.1| - 0.041 13.8 0.5 3.9 7.5 0.1 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 HypA PF01155.19 gi|433639843|ref|YP_007285603.1| - 0.1 12.6 0.4 0.12 12.4 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Mss51 PF13824.6 gi|433639843|ref|YP_007285603.1| - 0.13 12.3 0.5 0.88 9.7 0.1 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn-C2H2_12 PF18112.1 gi|433639843|ref|YP_007285603.1| - 0.26 11.8 2.0 4.9 7.7 0.1 2.3 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-C2H2_4 PF13894.6 gi|433639843|ref|YP_007285603.1| - 0.45 11.5 2.1 21 6.3 0.2 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 gi|433639843|ref|YP_007285603.1| - 0.5 10.4 0.2 0.5 10.4 0.2 1.9 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Pyridox_ox_2 PF12900.7 gi|433639844|ref|YP_007285604.1| - 9.1e-16 58.1 0.0 1.1e-15 57.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|433639844|ref|YP_007285604.1| - 6.6e-06 26.2 0.0 8.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase L_biotic_typeA PF04604.13 gi|433639844|ref|YP_007285604.1| - 0.1 12.5 0.3 0.37 10.7 0.2 1.8 2 0 0 2 2 2 0 Type-A lantibiotic PUL PF08324.11 gi|433639844|ref|YP_007285604.1| - 0.22 10.7 0.0 0.26 10.5 0.0 1.1 1 0 0 1 1 1 0 PUL domain HTH_10 PF04967.12 gi|433639845|ref|YP_007285605.1| - 2.1e-22 78.6 0.1 3.2e-22 78.1 0.1 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639845|ref|YP_007285605.1| - 3.9e-05 23.6 2.1 7e-05 22.7 1.9 1.6 1 1 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|433639845|ref|YP_007285605.1| - 5.5e-05 22.6 0.1 9.8e-05 21.8 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|433639845|ref|YP_007285605.1| - 0.014 14.9 0.0 0.045 13.3 0.0 1.9 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|433639845|ref|YP_007285605.1| - 0.015 14.8 0.1 0.086 12.4 0.1 2.0 1 1 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_5 PF01022.20 gi|433639845|ref|YP_007285605.1| - 0.018 14.9 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|433639845|ref|YP_007285605.1| - 0.031 14.2 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|433639845|ref|YP_007285605.1| - 0.042 13.9 0.0 0.084 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Homeodomain PF00046.29 gi|433639845|ref|YP_007285605.1| - 0.076 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain Fe_dep_repress PF01325.19 gi|433639845|ref|YP_007285605.1| - 0.094 12.9 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4_2 PF08281.12 gi|433639845|ref|YP_007285605.1| - 0.14 11.8 0.0 10 5.9 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Tnp_1_2 PF13022.6 gi|433639845|ref|YP_007285605.1| - 0.2 11.8 0.0 0.32 11.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TF_Zn_Ribbon PF08271.12 gi|433639846|ref|YP_007285606.1| - 0.00053 19.5 1.8 0.001 18.6 1.8 1.5 1 1 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|433639846|ref|YP_007285606.1| - 0.0012 18.2 0.8 0.43 10.1 0.1 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|433639846|ref|YP_007285606.1| - 0.0014 18.5 1.7 0.0031 17.4 1.7 1.6 1 1 0 1 1 1 1 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|433639846|ref|YP_007285606.1| - 0.0016 18.3 2.2 0.39 10.6 0.5 2.1 2 0 0 2 2 2 2 Zinc finger found in FPG and IleRS zinc_ribbon_5 PF13719.6 gi|433639846|ref|YP_007285606.1| - 0.0029 17.3 2.1 0.0057 16.4 2.1 1.5 1 1 0 1 1 1 1 zinc-ribbon domain zf_UBZ PF18439.1 gi|433639846|ref|YP_007285606.1| - 0.0061 16.1 0.3 0.19 11.3 0.1 2.2 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger DZR PF12773.7 gi|433639846|ref|YP_007285606.1| - 0.0077 16.2 0.7 0.01 15.9 0.7 1.3 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_9 PF14369.6 gi|433639846|ref|YP_007285606.1| - 0.027 14.7 0.8 0.027 14.7 0.8 2.0 1 1 1 2 2 2 0 zinc-ribbon PhnA_Zn_Ribbon PF08274.12 gi|433639846|ref|YP_007285606.1| - 0.042 13.8 0.1 0.042 13.8 0.1 1.5 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_10 PF10058.9 gi|433639846|ref|YP_007285606.1| - 0.048 13.4 0.4 0.1 12.4 0.4 1.6 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Elf1 PF05129.13 gi|433639846|ref|YP_007285606.1| - 0.072 13.1 0.3 0.078 13.0 0.3 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like C1_4 PF07975.12 gi|433639846|ref|YP_007285606.1| - 0.081 13.2 2.1 0.11 12.8 2.1 1.3 1 1 0 1 1 1 0 TFIIH C1-like domain zf-Mss51 PF13824.6 gi|433639846|ref|YP_007285606.1| - 0.09 12.9 3.0 0.75 9.9 0.4 2.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Ribosomal_L37ae PF01780.19 gi|433639846|ref|YP_007285606.1| - 0.15 12.2 0.1 0.19 11.8 0.1 1.3 1 1 0 1 1 1 0 Ribosomal L37ae protein family HTH_20 PF12840.7 gi|433639847|ref|YP_007285607.1| - 1.6e-11 44.0 0.2 2.6e-11 43.4 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|433639847|ref|YP_007285607.1| - 3.3e-06 26.8 0.1 5.2e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433639847|ref|YP_007285607.1| - 0.00036 20.4 0.1 0.00054 19.8 0.1 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|433639847|ref|YP_007285607.1| - 0.00047 19.7 0.1 0.00081 18.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|433639847|ref|YP_007285607.1| - 0.0019 18.0 0.0 0.0028 17.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 gi|433639847|ref|YP_007285607.1| - 0.0034 17.4 0.1 0.0069 16.4 0.0 1.5 2 0 0 2 2 2 1 Winged helix-turn helix TrmB PF01978.19 gi|433639847|ref|YP_007285607.1| - 0.019 14.9 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.16 gi|433639847|ref|YP_007285607.1| - 0.026 14.6 0.1 0.046 13.8 0.1 1.4 1 0 0 1 1 1 0 HemN C-terminal domain DUF2250 PF10007.9 gi|433639847|ref|YP_007285607.1| - 0.029 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_7 PF02796.15 gi|433639847|ref|YP_007285607.1| - 0.049 13.7 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_11 PF08279.12 gi|433639847|ref|YP_007285607.1| - 0.056 13.4 0.3 0.083 12.9 0.3 1.3 1 0 0 1 1 1 0 HTH domain CpeS PF09367.10 gi|433639847|ref|YP_007285607.1| - 0.078 12.9 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 CpeS-like protein MarR PF01047.22 gi|433639847|ref|YP_007285607.1| - 0.084 12.8 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|433639847|ref|YP_007285607.1| - 0.12 12.4 0.3 0.18 11.8 0.3 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FUR PF01475.19 gi|433639847|ref|YP_007285607.1| - 0.16 12.1 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family ArsR PF09824.9 gi|433639847|ref|YP_007285607.1| - 0.17 11.5 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator AbrB PF05145.12 gi|433639848|ref|YP_007285608.1| - 0.0047 15.9 2.2 0.0047 15.9 2.2 1.7 1 1 1 2 2 2 1 Transition state regulatory protein AbrB Usp PF00582.26 gi|433639849|ref|YP_007285609.1| - 7.7e-16 58.9 0.6 9.2e-16 58.6 0.6 1.1 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|433639849|ref|YP_007285609.1| - 0.018 15.1 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 DNA photolyase ABC_tran PF00005.27 gi|433639850|ref|YP_007285610.1| - 3.6e-23 82.6 0.0 5.3e-23 82.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639850|ref|YP_007285610.1| - 2.2e-11 44.1 0.9 1.3e-07 31.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|433639850|ref|YP_007285610.1| - 0.01 16.2 0.0 0.018 15.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain ABC2_membrane_2 PF12679.7 gi|433639851|ref|YP_007285611.1| - 4e-09 36.2 14.4 8e-09 35.2 14.4 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433639851|ref|YP_007285611.1| - 0.0001 21.9 2.6 0.0001 21.9 2.6 1.6 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433639851|ref|YP_007285611.1| - 0.028 13.5 7.9 0.0071 15.5 4.6 1.5 1 1 1 2 2 2 0 ABC-2 family transporter protein Vut_1 PF02592.15 gi|433639851|ref|YP_007285611.1| - 0.052 13.9 0.2 0.052 13.9 0.2 2.3 3 1 0 3 3 3 0 Putative vitamin uptake transporter ABC2_membrane_4 PF12730.7 gi|433639851|ref|YP_007285611.1| - 0.13 12.2 2.8 0.3 11.0 2.8 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein Usp PF00582.26 gi|433639852|ref|YP_007285612.1| - 1.3e-34 119.7 0.5 1.5e-34 119.5 0.5 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4131 PF13567.6 gi|433639853|ref|YP_007285613.1| - 4 7.1 7.4 2.8 7.6 1.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 gi|433639853|ref|YP_007285613.1| - 6 6.9 9.8 1.1 9.4 3.8 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Pyr_redox_2 PF07992.14 gi|433639854|ref|YP_007285614.1| - 1.5e-39 136.0 0.4 1.9e-39 135.6 0.4 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433639854|ref|YP_007285614.1| - 1.1e-18 67.6 0.8 6.6e-16 58.6 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|433639854|ref|YP_007285614.1| - 1.9e-17 63.5 0.0 5.1e-13 48.9 0.0 2.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|433639854|ref|YP_007285614.1| - 7.5e-09 35.2 3.2 8.4e-06 25.1 0.3 3.8 3 1 1 4 4 4 2 FAD binding domain DAO PF01266.24 gi|433639854|ref|YP_007285614.1| - 2.3e-07 30.7 3.8 0.0004 20.1 0.3 3.3 3 1 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|433639854|ref|YP_007285614.1| - 8.6e-07 28.6 0.4 4.2e-06 26.4 0.2 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|433639854|ref|YP_007285614.1| - 3.4e-06 26.0 0.6 0.03 13.0 0.1 3.4 4 0 0 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|433639854|ref|YP_007285614.1| - 9e-06 25.8 0.2 8e-05 22.8 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|433639854|ref|YP_007285614.1| - 2.3e-05 23.8 0.0 0.00031 20.1 0.0 2.2 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|433639854|ref|YP_007285614.1| - 0.00018 20.7 0.0 0.017 14.2 0.1 3.0 3 0 0 3 3 3 1 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|433639854|ref|YP_007285614.1| - 0.00035 19.8 0.0 0.015 14.5 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 gi|433639854|ref|YP_007285614.1| - 0.001 19.5 0.1 0.012 16.1 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|433639854|ref|YP_007285614.1| - 0.0036 16.6 0.2 0.11 11.8 0.1 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|433639854|ref|YP_007285614.1| - 0.0038 16.3 0.9 0.12 11.4 0.4 2.6 3 0 0 3 3 3 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|433639854|ref|YP_007285614.1| - 0.0056 16.0 1.4 0.99 8.6 0.3 2.9 2 1 1 3 3 3 1 FAD binding domain NAD_binding_9 PF13454.6 gi|433639854|ref|YP_007285614.1| - 0.072 13.1 0.4 2.8 7.9 0.0 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding FMO-like PF00743.19 gi|433639854|ref|YP_007285614.1| - 0.18 10.2 0.0 4.8 5.5 0.0 2.0 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like MCRA PF06100.11 gi|433639854|ref|YP_007285614.1| - 0.22 10.3 0.1 0.46 9.2 0.1 1.5 2 0 0 2 2 2 0 MCRA family Thioredoxin PF00085.20 gi|433639855|ref|YP_007285615.1| - 1.5e-28 98.8 0.0 1.7e-28 98.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433639855|ref|YP_007285615.1| - 3.1e-11 43.7 0.1 5.7e-10 39.6 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 gi|433639855|ref|YP_007285615.1| - 9e-06 25.6 0.1 8.1e-05 22.5 0.0 2.0 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_8 PF13905.6 gi|433639855|ref|YP_007285615.1| - 5.6e-05 23.4 0.0 0.054 13.8 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_3 PF13192.6 gi|433639855|ref|YP_007285615.1| - 0.00015 21.7 0.0 0.00024 21.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.6 gi|433639855|ref|YP_007285615.1| - 0.00023 20.9 0.0 0.00026 20.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_5 PF13743.6 gi|433639855|ref|YP_007285615.1| - 0.00045 20.0 0.0 0.012 15.3 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin Glutaredoxin PF00462.24 gi|433639855|ref|YP_007285615.1| - 0.00065 19.9 0.0 0.001 19.3 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin TraF PF13728.6 gi|433639855|ref|YP_007285615.1| - 0.00088 19.2 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein DUF836 PF05768.14 gi|433639855|ref|YP_007285615.1| - 0.0009 19.6 0.0 0.0012 19.2 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_7 PF13899.6 gi|433639855|ref|YP_007285615.1| - 0.0025 17.9 0.0 0.0043 17.2 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 gi|433639855|ref|YP_007285615.1| - 0.0037 17.2 0.0 0.016 15.1 0.0 1.7 1 1 1 2 2 2 1 AhpC/TSA family HyaE PF07449.11 gi|433639855|ref|YP_007285615.1| - 0.0061 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE OST3_OST6 PF04756.13 gi|433639855|ref|YP_007285615.1| - 0.047 13.0 0.0 0.059 12.7 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family TetR_C_31 PF17940.1 gi|433639855|ref|YP_007285615.1| - 0.073 13.3 1.7 0.11 12.7 1.7 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CPBP PF02517.16 gi|433639857|ref|YP_007285617.1| - 4.8e-15 55.7 4.4 4.8e-15 55.7 4.4 3.2 2 1 1 4 4 4 1 CPBP intramembrane metalloprotease Lactamase_B PF00753.27 gi|433639858|ref|YP_007285618.1| - 8.6e-21 74.9 6.9 2e-20 73.7 6.9 1.7 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.20 gi|433639858|ref|YP_007285618.1| - 3.2e-11 43.7 0.0 1.3e-10 41.7 0.0 2.0 2 1 0 2 2 2 1 Rhodanese-like domain Lactamase_B_2 PF12706.7 gi|433639858|ref|YP_007285618.1| - 0.0026 17.3 0.3 0.0075 15.8 0.2 1.8 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433639858|ref|YP_007285618.1| - 0.042 13.7 0.0 0.097 12.6 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF2243 PF10002.9 gi|433639859|ref|YP_007285619.1| - 2.1e-48 164.0 10.8 2.5e-48 163.8 10.8 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2243) Thioredoxin_4 PF13462.6 gi|433639860|ref|YP_007285620.1| - 2.3e-23 83.2 0.0 2.7e-23 82.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|433639860|ref|YP_007285620.1| - 9.1e-12 45.1 0.9 9.6e-07 28.8 0.1 2.1 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|433639860|ref|YP_007285620.1| - 1.1e-11 45.1 0.0 2.2e-11 44.1 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.6 gi|433639860|ref|YP_007285620.1| - 0.045 13.4 0.0 0.068 12.8 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin DUF2162 PF09930.9 gi|433639862|ref|YP_007285622.1| - 0.0025 17.3 1.3 0.0031 17.0 1.3 1.1 1 0 0 1 1 1 1 Predicted transporter (DUF2162) DUF2975 PF11188.8 gi|433639863|ref|YP_007285623.1| - 0.022 14.6 0.8 0.026 14.4 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) HTH_20 PF12840.7 gi|433639864|ref|YP_007285624.1| - 4.2e-07 29.9 0.4 6.4e-07 29.3 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain PadR PF03551.14 gi|433639864|ref|YP_007285624.1| - 0.005 16.8 0.0 0.0079 16.1 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family FUR PF01475.19 gi|433639864|ref|YP_007285624.1| - 0.0093 16.1 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_IclR PF09339.10 gi|433639864|ref|YP_007285624.1| - 0.019 14.8 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|433639864|ref|YP_007285624.1| - 0.051 13.5 0.2 0.1 12.5 0.2 1.5 1 0 0 1 1 1 0 MarR family DUF2776 PF10951.8 gi|433639865|ref|YP_007285625.1| - 0.0067 15.7 0.5 0.0082 15.4 0.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2776) Pyr_redox_2 PF07992.14 gi|433639866|ref|YP_007285626.1| - 1.8e-47 162.0 0.1 2.8e-47 161.4 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|433639866|ref|YP_007285626.1| - 3.6e-24 85.2 0.1 5.8e-24 84.5 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|433639866|ref|YP_007285626.1| - 1.8e-16 60.4 0.0 1.1e-13 51.5 0.0 3.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|433639866|ref|YP_007285626.1| - 2.8e-07 30.1 0.0 1.3e-05 24.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|433639866|ref|YP_007285626.1| - 0.00022 20.5 0.0 0.00057 19.1 0.0 1.6 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) XdhC_C PF13478.6 gi|433639866|ref|YP_007285626.1| - 0.0085 16.6 0.2 0.13 12.8 0.0 2.4 2 0 0 2 2 2 1 XdhC Rossmann domain NAD_binding_7 PF13241.6 gi|433639866|ref|YP_007285626.1| - 0.011 16.1 0.0 0.058 13.8 0.0 2.1 2 0 0 2 2 2 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|433639866|ref|YP_007285626.1| - 0.017 14.4 0.0 0.73 9.1 0.0 2.5 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain TonB_C PF03544.14 gi|433639866|ref|YP_007285626.1| - 0.067 13.6 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 Gram-negative bacterial TonB protein C-terminal TrmB PF01978.19 gi|433639868|ref|YP_007285628.1| - 2.2e-16 59.5 0.0 3e-16 59.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|433639868|ref|YP_007285628.1| - 3.5e-05 23.7 0.0 6.5e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|433639868|ref|YP_007285628.1| - 8.4e-05 22.3 0.0 0.00017 21.3 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|433639868|ref|YP_007285628.1| - 0.00013 21.8 0.1 0.00037 20.3 0.0 1.7 2 0 0 2 2 2 1 MarR family Penicillinase_R PF03965.16 gi|433639868|ref|YP_007285628.1| - 0.00021 21.6 0.0 0.00029 21.1 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.6 gi|433639868|ref|YP_007285628.1| - 0.0019 17.7 0.0 0.003 17.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding UMPH-1 PF05822.12 gi|433639868|ref|YP_007285628.1| - 0.0053 16.3 0.1 0.0077 15.8 0.1 1.3 1 1 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) HTH_20 PF12840.7 gi|433639868|ref|YP_007285628.1| - 0.0063 16.5 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain 2OG-Fe_Oxy_2 PF10014.9 gi|433639868|ref|YP_007285628.1| - 0.0074 16.1 0.1 0.0094 15.8 0.1 1.2 1 0 0 1 1 1 1 2OG-Fe dioxygenase MarR_2 PF12802.7 gi|433639868|ref|YP_007285628.1| - 0.0094 15.8 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 MarR family RuvB_C PF05491.13 gi|433639868|ref|YP_007285628.1| - 0.015 15.1 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Rrf2 PF02082.20 gi|433639868|ref|YP_007285628.1| - 0.032 14.6 0.0 0.12 12.8 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator DUF4777 PF16007.5 gi|433639868|ref|YP_007285628.1| - 0.035 14.3 0.0 0.22 11.8 0.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4777) HTH_27 PF13463.6 gi|433639868|ref|YP_007285628.1| - 0.047 14.2 0.0 0.079 13.5 0.0 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_23 PF13384.6 gi|433639868|ref|YP_007285628.1| - 0.049 13.4 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_5 PF01022.20 gi|433639868|ref|YP_007285628.1| - 0.064 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|433639868|ref|YP_007285628.1| - 0.15 12.1 0.0 0.25 11.3 0.0 1.5 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain PqqD PF05402.12 gi|433639868|ref|YP_007285628.1| - 0.2 12.0 0.7 3.6 7.9 0.1 2.5 2 1 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) TauE PF01925.19 gi|433639869|ref|YP_007285629.1| - 2.9e-37 128.6 28.9 2.9e-37 128.6 28.9 1.8 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE ATP-synt_C PF00137.21 gi|433639870|ref|YP_007285630.1| - 0.0016 18.8 0.4 0.0021 18.3 0.4 1.2 1 0 0 1 1 1 1 ATP synthase subunit C TraQ PF09679.10 gi|433639870|ref|YP_007285630.1| - 0.074 13.0 0.2 0.076 12.9 0.2 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) Usp PF00582.26 gi|433639871|ref|YP_007285631.1| - 4e-40 137.6 0.4 8.3e-23 81.5 0.0 2.2 2 0 0 2 2 2 2 Universal stress protein family TAT_signal PF10518.9 gi|433639872|ref|YP_007285632.1| - 0.091 12.6 6.8 0.17 11.8 6.8 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence K_channel_TID PF07941.11 gi|433639872|ref|YP_007285632.1| - 0.15 12.6 8.1 0.26 11.7 8.1 1.4 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Zip PF02535.22 gi|433639873|ref|YP_007285633.1| - 1.3e-18 67.3 11.3 5.1e-14 52.2 6.4 2.1 1 1 1 2 2 2 2 ZIP Zinc transporter YhhN PF07947.14 gi|433639873|ref|YP_007285633.1| - 0.43 10.2 6.7 0.075 12.6 0.6 2.4 2 0 0 2 2 2 0 YhhN family OsmC PF02566.19 gi|433639874|ref|YP_007285634.1| - 2.6e-17 63.1 0.0 3.7e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein DUF1641 PF07849.11 gi|433639875|ref|YP_007285635.1| - 7.9e-17 60.9 1.2 5.3e-16 58.2 0.6 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) Pyr_redox_2 PF07992.14 gi|433639876|ref|YP_007285636.1| - 4.5e-19 68.8 0.1 4.9e-18 65.4 0.1 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|433639876|ref|YP_007285636.1| - 9.6e-05 22.4 2.2 0.35 10.8 0.1 2.8 2 1 1 3 3 3 2 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|433639876|ref|YP_007285636.1| - 0.11 13.1 0.2 27 5.4 0.1 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase TusA PF01206.17 gi|433639877|ref|YP_007285637.1| - 4.9e-18 64.7 0.0 5.4e-18 64.6 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|433639877|ref|YP_007285637.1| - 0.082 12.8 0.2 0.86 9.5 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) Thioredoxin PF00085.20 gi|433639878|ref|YP_007285638.1| - 9.3e-27 93.0 0.0 1.3e-26 92.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|433639878|ref|YP_007285638.1| - 1.1e-09 38.7 0.1 3.9e-08 33.7 0.1 2.3 1 1 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 gi|433639878|ref|YP_007285638.1| - 5e-05 23.2 0.4 0.00014 21.7 0.1 1.9 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_7 PF13899.6 gi|433639878|ref|YP_007285638.1| - 5.2e-05 23.3 0.4 0.00011 22.3 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_8 PF13905.6 gi|433639878|ref|YP_007285638.1| - 0.00018 21.8 0.0 0.012 15.9 0.0 2.2 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 gi|433639878|ref|YP_007285638.1| - 0.00033 20.6 0.0 0.00051 19.9 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_3 PF13192.6 gi|433639878|ref|YP_007285638.1| - 0.0021 18.0 0.0 0.0031 17.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.6 gi|433639878|ref|YP_007285638.1| - 0.0028 17.4 0.0 0.0061 16.3 0.0 1.5 2 0 0 2 2 2 1 Thioredoxin AhpC-TSA PF00578.21 gi|433639878|ref|YP_007285638.1| - 0.0088 16.0 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Glutaredoxin PF00462.24 gi|433639878|ref|YP_007285638.1| - 0.0092 16.2 0.0 0.023 14.9 0.0 1.6 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_5 PF13743.6 gi|433639878|ref|YP_007285638.1| - 0.03 14.0 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin TrbC_Ftype PF09673.10 gi|433639878|ref|YP_007285638.1| - 0.046 13.8 0.0 0.065 13.3 0.0 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein DUF836 PF05768.14 gi|433639878|ref|YP_007285638.1| - 0.056 13.9 0.0 0.095 13.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_4 PF13462.6 gi|433639878|ref|YP_007285638.1| - 0.081 13.1 0.1 0.45 10.6 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin OST3_OST6 PF04756.13 gi|433639878|ref|YP_007285638.1| - 0.11 11.8 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HyaE PF07449.11 gi|433639878|ref|YP_007285638.1| - 0.14 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF1684 PF07920.11 gi|433639879|ref|YP_007285639.1| - 6e-51 172.4 0.1 7.9e-51 172.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1684) TrkA_N PF02254.18 gi|433639880|ref|YP_007285640.1| - 8.2e-41 138.9 7.7 6e-21 74.9 0.8 2.8 2 1 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|433639880|ref|YP_007285640.1| - 8e-20 70.5 1.0 3.6e-11 42.7 0.1 3.2 2 0 0 2 2 2 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|433639880|ref|YP_007285640.1| - 0.00015 22.1 1.6 0.00021 21.7 0.3 2.0 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|433639880|ref|YP_007285640.1| - 0.00028 20.3 0.3 0.02 14.1 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain AdoHcyase_NAD PF00670.21 gi|433639880|ref|YP_007285640.1| - 0.0021 18.1 0.2 0.0058 16.7 0.1 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|433639880|ref|YP_007285640.1| - 0.0056 16.1 0.0 0.0098 15.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|433639880|ref|YP_007285640.1| - 0.019 14.7 0.1 0.039 13.7 0.1 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IlvN PF07991.12 gi|433639880|ref|YP_007285640.1| - 0.022 14.3 0.8 0.054 13.1 0.1 1.9 2 1 1 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|433639880|ref|YP_007285640.1| - 0.034 14.2 0.0 0.065 13.3 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 gi|433639880|ref|YP_007285640.1| - 0.052 14.1 0.3 0.17 12.5 0.3 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ion_trans_2 PF07885.16 gi|433639880|ref|YP_007285640.1| - 0.08 12.9 6.1 0.19 11.7 6.1 1.6 1 0 0 1 1 1 0 Ion channel FMO-like PF00743.19 gi|433639880|ref|YP_007285640.1| - 0.12 10.7 0.0 0.18 10.2 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Zip PF02535.22 gi|433639881|ref|YP_007285641.1| - 3.6e-39 134.9 23.9 3.6e-29 102.0 6.9 2.0 1 1 1 2 2 2 2 ZIP Zinc transporter CoA_binding_3 PF13727.6 gi|433639881|ref|YP_007285641.1| - 0.61 10.1 6.8 3.1 7.8 2.9 2.3 2 0 0 2 2 2 0 CoA-binding domain PHO4 PF01384.20 gi|433639881|ref|YP_007285641.1| - 5.2 6.0 7.6 22 4.0 7.6 2.1 1 1 0 1 1 1 0 Phosphate transporter family Usp PF00582.26 gi|433639882|ref|YP_007285642.1| - 9.3e-61 204.5 10.8 1.5e-30 106.6 3.4 2.1 2 0 0 2 2 2 2 Universal stress protein family PGM_PMM_I PF02878.16 gi|433639882|ref|YP_007285642.1| - 0.00051 19.8 0.5 0.15 11.7 0.0 2.6 3 0 0 3 3 3 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Dala_Dala_lig_N PF01820.21 gi|433639882|ref|YP_007285642.1| - 0.13 12.7 0.0 1.9 9.0 0.0 2.2 1 1 1 2 2 2 0 D-ala D-ala ligase N-terminus Amino_oxidase PF01593.24 gi|433639884|ref|YP_007285644.1| - 3.2e-28 99.2 0.0 4e-28 98.9 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|433639884|ref|YP_007285644.1| - 7.9e-12 45.2 0.0 1.8e-11 44.1 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|433639884|ref|YP_007285644.1| - 0.00027 20.6 1.4 0.0088 15.7 1.3 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|433639884|ref|YP_007285644.1| - 0.017 15.6 0.5 0.61 10.7 1.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 gi|433639884|ref|YP_007285644.1| - 0.032 12.7 0.1 0.04 12.3 0.1 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_Gly3P_dh_N PF01210.23 gi|433639884|ref|YP_007285644.1| - 0.098 12.6 0.0 0.24 11.4 0.0 1.7 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.14 gi|433639884|ref|YP_007285644.1| - 0.23 10.7 1.1 1.1 8.4 0.6 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Ferrochelatase PF00762.19 gi|433639885|ref|YP_007285645.1| - 7.7e-69 232.2 0.0 9.5e-69 231.9 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase CbiX PF01903.17 gi|433639885|ref|YP_007285645.1| - 6.4e-06 26.5 0.0 0.00036 20.8 0.0 2.5 2 0 0 2 2 2 1 CbiX Glyco_trans_4_4 PF13579.6 gi|433639885|ref|YP_007285645.1| - 0.00092 19.7 4.8 0.0027 18.2 0.6 2.4 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|433639885|ref|YP_007285645.1| - 0.0063 16.5 0.0 0.016 15.2 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 URO-D PF01208.17 gi|433639886|ref|YP_007285646.1| - 8.9e-114 380.2 0.0 9.9e-114 380.1 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Erythro_esteras PF05139.14 gi|433639886|ref|YP_007285646.1| - 0.0032 17.4 0.0 0.0052 16.6 0.0 1.3 1 0 0 1 1 1 1 Erythromycin esterase DUF934 PF06073.12 gi|433639886|ref|YP_007285646.1| - 0.026 14.4 0.0 0.091 12.7 0.0 1.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF934) YdjM PF04307.14 gi|433639887|ref|YP_007285647.1| - 0.0018 17.6 18.9 0.03 13.6 18.9 2.4 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF2238 PF09997.9 gi|433639888|ref|YP_007285648.1| - 0.005 16.6 0.8 0.18 11.6 0.8 2.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) PQQ_2 PF13360.6 gi|433639889|ref|YP_007285649.1| - 2.1e-24 86.4 15.5 2.8e-13 50.0 8.8 3.1 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|433639889|ref|YP_007285649.1| - 9.6e-15 54.6 43.0 9.9e-06 25.9 2.1 7.6 6 1 0 6 6 6 5 PQQ-like domain PQQ PF01011.21 gi|433639889|ref|YP_007285649.1| - 3.2e-11 42.6 17.7 0.0048 16.8 0.6 6.9 7 0 0 7 7 7 4 PQQ enzyme repeat SPDY PF03771.16 gi|433639890|ref|YP_007285650.1| - 0.57 10.2 6.9 1.5 8.8 6.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF317) Penicillinase_R PF03965.16 gi|433639891|ref|YP_007285651.1| - 0.0012 19.2 0.0 0.0022 18.3 0.0 1.6 1 1 0 1 1 1 1 Penicillinase repressor WYL PF13280.6 gi|433639891|ref|YP_007285651.1| - 0.0048 17.0 0.1 0.0069 16.5 0.1 1.4 1 1 0 1 1 1 1 WYL domain MarR_2 PF12802.7 gi|433639891|ref|YP_007285651.1| - 0.012 15.4 0.5 0.054 13.4 0.0 2.2 2 1 1 3 3 3 0 MarR family HTH_20 PF12840.7 gi|433639891|ref|YP_007285651.1| - 0.024 14.7 0.0 1.4 9.0 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain PspB PF06667.12 gi|433639891|ref|YP_007285651.1| - 0.32 11.1 2.1 10 6.2 0.2 2.3 2 0 0 2 2 2 0 Phage shock protein B TBPIP PF07106.13 gi|433639892|ref|YP_007285652.1| - 0.0037 17.2 0.0 0.0082 16.1 0.0 1.5 2 0 0 2 2 2 1 TBPIP/Hop2 winged helix domain TrmB PF01978.19 gi|433639892|ref|YP_007285652.1| - 0.011 15.6 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Cep57_MT_bd PF06657.13 gi|433639892|ref|YP_007285652.1| - 0.034 14.6 0.3 0.61 10.6 0.0 2.3 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 HTH_DeoR PF08220.12 gi|433639892|ref|YP_007285652.1| - 0.039 13.7 1.5 1.5 8.6 0.1 2.3 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain DUF1476 PF07345.11 gi|433639892|ref|YP_007285652.1| - 0.044 14.1 0.4 0.083 13.3 0.4 1.6 1 1 0 1 1 1 0 ATPase inhibitor subunit zeta DUF4423 PF14394.6 gi|433639892|ref|YP_007285652.1| - 0.057 13.1 0.2 0.08 12.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) GvpK PF05121.12 gi|433639892|ref|YP_007285652.1| - 0.085 12.9 1.1 0.94 9.6 1.6 2.0 1 1 1 2 2 2 0 Gas vesicle protein K HTH_11 PF08279.12 gi|433639892|ref|YP_007285652.1| - 0.13 12.2 0.2 2.1 8.4 0.1 2.3 2 0 0 2 2 2 0 HTH domain Rubredoxin PF00301.20 gi|433639893|ref|YP_007285653.1| - 0.075 13.1 0.2 0.098 12.7 0.2 1.1 1 0 0 1 1 1 0 Rubredoxin PHO4 PF01384.20 gi|433639894|ref|YP_007285654.1| - 9.5e-49 166.2 32.8 9.5e-49 166.2 32.8 1.4 1 1 0 1 1 1 1 Phosphate transporter family Sulf_transp PF04143.14 gi|433639895|ref|YP_007285655.1| - 4.2e-09 36.4 4.3 4.2e-09 36.4 4.3 2.0 1 1 1 2 2 2 2 Sulphur transport Sulf_transp PF04143.14 gi|433639896|ref|YP_007285656.1| - 4.2e-13 49.5 15.9 1.3e-11 44.6 8.9 2.0 1 1 1 2 2 2 2 Sulphur transport Rab5ip PF07019.12 gi|433639896|ref|YP_007285656.1| - 1.1 9.9 7.9 8 7.1 1.7 2.5 2 0 0 2 2 2 0 Rab5-interacting protein (Rab5ip) Trp_oprn_chp PF09534.10 gi|433639896|ref|YP_007285656.1| - 4.2 7.1 11.2 0.038 13.8 1.5 2.3 2 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Lactamase_B PF00753.27 gi|433639897|ref|YP_007285657.1| - 1.3e-12 48.2 7.8 2.8e-12 47.1 7.8 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.20 gi|433639897|ref|YP_007285657.1| - 6e-09 36.4 0.0 1e-08 35.7 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain TusA PF01206.17 gi|433639898|ref|YP_007285658.1| - 3.6e-19 68.3 0.0 4.2e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|433639898|ref|YP_007285658.1| - 0.013 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) DrsE_2 PF13686.6 gi|433639899|ref|YP_007285659.1| - 8.3e-51 171.9 0.3 9.9e-51 171.7 0.3 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|433639899|ref|YP_007285659.1| - 2.3e-06 28.0 0.0 1.2e-05 25.6 0.0 2.0 1 1 0 1 1 1 1 DsrE/DsrF-like family HalX PF08663.10 gi|433639899|ref|YP_007285659.1| - 0.016 15.5 0.2 0.029 14.7 0.2 1.4 1 0 0 1 1 1 0 HalX domain FCD PF07729.12 gi|433639899|ref|YP_007285659.1| - 0.058 13.8 0.9 0.13 12.7 0.2 1.8 2 0 0 2 2 2 0 FCD domain HalOD1 PF18545.1 gi|433639900|ref|YP_007285660.1| - 1.5e-26 92.4 0.5 2e-26 92.1 0.5 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 BAAT_C PF08840.11 gi|433639901|ref|YP_007285661.1| - 0.0044 17.0 0.0 0.046 13.6 0.0 2.0 2 0 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 gi|433639901|ref|YP_007285661.1| - 0.01 16.4 0.4 2.4 8.7 0.0 2.0 1 1 1 2 2 2 0 Alpha/beta hydrolase family DLH PF01738.18 gi|433639901|ref|YP_007285661.1| - 0.046 13.3 0.0 0.067 12.7 0.0 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family BofA PF07441.11 gi|433639902|ref|YP_007285662.1| - 1.4e-07 31.6 20.6 2.4e-07 30.9 20.6 1.4 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Phage_holin_3_3 PF16083.5 gi|433639902|ref|YP_007285662.1| - 0.95 9.6 10.1 0.09 12.9 3.2 2.4 1 1 2 3 3 3 0 LydA holin phage, holin superfamily III DUF2754 PF10953.8 gi|433639902|ref|YP_007285662.1| - 1.7 9.0 6.4 1.7 8.9 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2754) ADP_PFK_GK PF04587.15 gi|433639903|ref|YP_007285663.1| - 2.3e-82 276.8 0.0 2.8e-82 276.5 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region PPDK_N PF01326.19 gi|433639904|ref|YP_007285664.1| - 2.3e-111 372.2 0.0 3.5e-111 371.6 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|433639904|ref|YP_007285664.1| - 5.2e-56 189.9 0.0 7.9e-56 189.3 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|433639904|ref|YP_007285664.1| - 5.7e-24 83.6 0.8 1.7e-23 82.1 0.8 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain TFIIA_gamma_N PF02268.16 gi|433639904|ref|YP_007285664.1| - 0.13 12.3 0.0 0.37 10.8 0.0 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain NTP_transferase PF00483.23 gi|433639905|ref|YP_007285665.1| - 3.8e-36 124.9 0.0 5e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|433639905|ref|YP_007285665.1| - 2.2e-12 47.6 0.0 3.3e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|433639905|ref|YP_007285665.1| - 0.086 12.6 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Usp PF00582.26 gi|433639906|ref|YP_007285666.1| - 8.2e-59 198.1 8.7 4.8e-30 104.9 0.1 2.0 2 0 0 2 2 2 2 Universal stress protein family Ag332 PF04671.12 gi|433639906|ref|YP_007285666.1| - 0.36 10.8 5.0 0.98 9.4 0.3 2.8 3 0 0 3 3 3 0 Erythrocyte membrane-associated giant protein antigen 332 Glycos_transf_1 PF00534.20 gi|433639907|ref|YP_007285667.1| - 5.7e-29 100.9 0.0 8.3e-29 100.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|433639907|ref|YP_007285667.1| - 2.5e-17 63.6 0.0 4.3e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|433639907|ref|YP_007285667.1| - 5.8e-08 33.0 0.0 1e-07 32.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|433639907|ref|YP_007285667.1| - 0.087 12.8 0.0 0.45 10.5 0.0 2.2 1 1 1 2 2 2 0 Glycosyltransferase Family 4 Usp PF00582.26 gi|433639908|ref|YP_007285668.1| - 7.9e-32 110.7 4.2 8.8e-32 110.5 4.2 1.0 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|433639908|ref|YP_007285668.1| - 0.015 15.2 1.9 0.045 13.6 1.9 1.9 1 1 0 1 1 1 0 Electron transfer flavoprotein domain PRA-PH PF01503.17 gi|433639908|ref|YP_007285668.1| - 0.068 13.6 0.8 0.097 13.1 0.8 1.4 1 1 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase E1-E2_ATPase PF00122.20 gi|433639910|ref|YP_007285670.1| - 5.6e-49 166.1 2.5 5.6e-49 166.1 2.5 2.7 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|433639910|ref|YP_007285670.1| - 7.3e-36 123.6 2.0 7.3e-36 123.6 2.0 1.8 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.26 gi|433639910|ref|YP_007285670.1| - 6.9e-22 76.9 0.0 1.8e-21 75.6 0.0 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 gi|433639910|ref|YP_007285670.1| - 2.3e-20 72.4 0.0 1.4e-19 69.9 0.0 2.4 3 0 0 3 3 3 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 gi|433639910|ref|YP_007285670.1| - 4.5e-18 66.3 8.6 3.1e-17 63.6 8.6 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433639910|ref|YP_007285670.1| - 7.3e-07 29.8 0.4 1.7e-06 28.6 0.4 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|433639910|ref|YP_007285670.1| - 0.0021 17.9 0.7 0.17 11.6 0.4 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Usp PF00582.26 gi|433639911|ref|YP_007285671.1| - 1.1e-31 110.3 0.6 1.2e-31 110.1 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family DeoC PF01791.9 gi|433639912|ref|YP_007285672.1| - 5.9e-09 35.9 1.6 7.7e-09 35.5 1.6 1.2 1 0 0 1 1 1 1 DeoC/LacD family aldolase DHO_dh PF01180.21 gi|433639912|ref|YP_007285672.1| - 0.0039 16.5 0.2 0.0074 15.5 0.2 1.4 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase UDPG_MGDP_dh PF00984.19 gi|433639912|ref|YP_007285672.1| - 0.028 14.6 0.0 0.086 13.1 0.0 1.8 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain TruD PF01142.18 gi|433639912|ref|YP_007285672.1| - 0.048 12.5 0.1 0.065 12.0 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) DUF2267 PF10025.9 gi|433639913|ref|YP_007285673.1| - 5e-29 101.1 0.2 6.3e-29 100.7 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2267) DUF4010 PF13194.6 gi|433639914|ref|YP_007285674.1| - 1.6e-41 142.3 28.5 1.6e-41 142.3 28.5 2.8 2 2 1 3 3 3 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|433639914|ref|YP_007285674.1| - 5.6e-18 65.5 10.2 5.6e-18 65.5 10.2 3.8 3 2 0 3 3 3 1 MgtC family AzlD PF05437.12 gi|433639915|ref|YP_007285675.1| - 0.032 14.4 0.1 0.06 13.5 0.1 1.4 1 0 0 1 1 1 0 Branched-chain amino acid transport protein (AzlD) EamA PF00892.20 gi|433639915|ref|YP_007285675.1| - 0.059 13.5 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 EamA-like transporter family VanZ PF04892.12 gi|433639915|ref|YP_007285675.1| - 0.064 13.9 0.0 0.1 13.3 0.0 1.3 1 1 0 1 1 1 0 VanZ like family Usp PF00582.26 gi|433639916|ref|YP_007285676.1| - 6.6e-07 29.9 1.4 9.9e-07 29.4 1.4 1.3 1 1 0 1 1 1 1 Universal stress protein family Usp PF00582.26 gi|433639917|ref|YP_007285677.1| - 2e-51 174.2 15.3 4.6e-27 95.3 0.6 2.0 2 0 0 2 2 2 2 Universal stress protein family Pyr_redox_2 PF07992.14 gi|433639918|ref|YP_007285678.1| - 4.8e-54 183.6 6.9 9.3e-54 182.6 6.9 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|433639918|ref|YP_007285678.1| - 5.2e-23 81.4 1.8 1.2e-18 67.4 0.1 3.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|433639918|ref|YP_007285678.1| - 3.8e-13 49.7 0.1 5.2e-12 46.0 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NAD_binding_8 PF13450.6 gi|433639918|ref|YP_007285678.1| - 8.4e-08 32.3 0.1 0.011 15.9 0.0 3.0 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|433639918|ref|YP_007285678.1| - 2.2e-05 23.4 0.8 0.015 14.1 0.0 3.7 3 1 1 4 4 4 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|433639918|ref|YP_007285678.1| - 0.00098 18.5 0.6 0.52 9.5 0.0 3.1 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|433639918|ref|YP_007285678.1| - 0.0014 18.1 0.1 0.15 11.4 0.0 2.5 2 1 0 2 2 2 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|433639918|ref|YP_007285678.1| - 0.014 15.3 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|433639918|ref|YP_007285678.1| - 0.016 15.5 0.3 5.3 7.3 0.0 3.6 2 1 1 3 3 3 0 TrkA-N domain GIDA PF01134.22 gi|433639918|ref|YP_007285678.1| - 0.028 13.5 0.8 6.6 5.7 0.1 2.8 2 1 1 3 3 3 0 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.14 gi|433639918|ref|YP_007285678.1| - 0.047 13.3 0.1 0.71 9.4 0.0 2.4 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amino_oxidase PF01593.24 gi|433639918|ref|YP_007285678.1| - 0.052 12.8 0.4 0.25 10.6 0.1 2.1 2 1 0 2 2 2 0 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|433639918|ref|YP_007285678.1| - 0.15 11.0 2.2 5.4 6.0 0.0 2.7 3 0 0 3 3 3 0 Lycopene cyclase protein Myosin_N PF02736.19 gi|433639918|ref|YP_007285678.1| - 0.73 9.7 3.8 3.2 7.7 0.6 2.7 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain AlaDh_PNT_C PF01262.21 gi|433639918|ref|YP_007285678.1| - 7.3 5.8 13.6 3.5 6.9 0.0 3.8 5 0 0 5 5 5 0 Alanine dehydrogenase/PNT, C-terminal domain Aminotran_5 PF00266.19 gi|433639919|ref|YP_007285679.1| - 5.7e-55 186.8 0.0 1.2e-54 185.8 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|433639919|ref|YP_007285679.1| - 0.067 11.7 0.0 0.1 11.1 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Usp PF00582.26 gi|433639920|ref|YP_007285680.1| - 2.7e-32 112.2 4.6 3e-32 112.1 4.6 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|433639920|ref|YP_007285680.1| - 0.038 14.0 0.1 0.057 13.4 0.1 1.3 1 1 0 1 1 1 0 DNA photolyase DUF2154 PF09922.9 gi|433639921|ref|YP_007285681.1| - 2.7e-08 33.7 0.0 3.8e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Cell wall-active antibiotics response 4TMS YvqF YtpI PF14007.6 gi|433639921|ref|YP_007285681.1| - 0.13 12.4 1.5 0.44 10.7 0.4 2.2 2 0 0 2 2 2 0 YtpI-like protein NosD PF05048.13 gi|433639922|ref|YP_007285682.1| - 2.7e-20 72.7 0.0 2.7e-18 66.1 0.0 2.1 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|433639922|ref|YP_007285682.1| - 1.6e-14 54.0 0.0 1.6e-13 50.8 0.0 2.3 1 1 1 2 2 2 2 Right handed beta helix region NosL PF05573.12 gi|433639922|ref|YP_007285682.1| - 2.9e-13 50.3 0.1 5.6e-13 49.4 0.1 1.5 1 0 0 1 1 1 1 NosL DUF1565 PF07602.11 gi|433639922|ref|YP_007285682.1| - 0.0084 15.5 5.8 0.45 9.8 5.8 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1565) ABC_tran PF00005.27 gi|433639923|ref|YP_007285683.1| - 3.3e-27 95.7 0.0 4.6e-27 95.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639923|ref|YP_007285683.1| - 2.6e-19 70.1 0.0 1.6e-10 41.3 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433639923|ref|YP_007285683.1| - 7.3e-06 25.6 0.0 0.058 12.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|433639923|ref|YP_007285683.1| - 3.1e-05 24.4 0.1 8.5e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_15 PF13175.6 gi|433639923|ref|YP_007285683.1| - 0.00022 21.0 0.0 0.01 15.6 0.1 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|433639923|ref|YP_007285683.1| - 0.00037 20.8 0.0 0.00069 19.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433639923|ref|YP_007285683.1| - 0.0027 17.4 0.1 0.0052 16.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|433639923|ref|YP_007285683.1| - 0.0028 17.8 0.0 0.0054 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|433639923|ref|YP_007285683.1| - 0.0028 17.9 0.0 0.0065 16.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|433639923|ref|YP_007285683.1| - 0.003 18.1 0.1 0.0042 17.6 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|433639923|ref|YP_007285683.1| - 0.0042 16.8 1.3 0.0088 15.8 1.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|433639923|ref|YP_007285683.1| - 0.0063 15.2 0.0 0.13 10.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|433639923|ref|YP_007285683.1| - 0.012 15.6 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|433639923|ref|YP_007285683.1| - 0.013 15.6 0.0 1.5 8.9 0.0 2.2 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA PF00004.29 gi|433639923|ref|YP_007285683.1| - 0.014 15.8 0.1 0.024 15.0 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|433639923|ref|YP_007285683.1| - 0.044 13.5 0.1 0.07 12.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|433639923|ref|YP_007285683.1| - 0.056 13.0 3.1 0.15 11.6 0.3 2.5 2 1 1 3 3 3 0 AAA domain NACHT PF05729.12 gi|433639923|ref|YP_007285683.1| - 0.056 13.3 0.1 0.091 12.7 0.1 1.3 1 0 0 1 1 1 0 NACHT domain cobW PF02492.19 gi|433639923|ref|YP_007285683.1| - 0.062 12.9 0.7 0.16 11.6 0.5 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 gi|433639923|ref|YP_007285683.1| - 0.089 12.4 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 gi|433639923|ref|YP_007285683.1| - 0.1 12.6 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_27 PF13514.6 gi|433639923|ref|YP_007285683.1| - 0.12 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 gi|433639923|ref|YP_007285683.1| - 0.17 10.7 0.0 0.25 10.1 0.0 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_18 PF13238.6 gi|433639923|ref|YP_007285683.1| - 0.2 12.2 0.1 0.36 11.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|433639923|ref|YP_007285683.1| - 0.53 7.7 0.5 0.69 7.3 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC2_membrane_2 PF12679.7 gi|433639924|ref|YP_007285684.1| - 5.9e-07 29.0 26.0 5.5e-06 25.9 26.0 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein Zn_peptidase PF04228.13 gi|433639924|ref|YP_007285684.1| - 0.23 10.9 0.4 1.3 8.4 0.2 2.1 2 0 0 2 2 2 0 Putative neutral zinc metallopeptidase ABC2_membrane_3 PF12698.7 gi|433639924|ref|YP_007285684.1| - 0.32 10.1 7.2 0.38 9.8 7.2 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein NosL PF05573.12 gi|433639925|ref|YP_007285685.1| - 6.4e-44 149.5 0.1 7.7e-44 149.2 0.1 1.1 1 0 0 1 1 1 1 NosL HTH_20 PF12840.7 gi|433639926|ref|YP_007285686.1| - 0.0015 18.6 0.1 0.0047 17.0 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain zf-ribbon_3 PF13248.6 gi|433639926|ref|YP_007285686.1| - 0.0024 17.2 0.4 7.1 6.2 0.1 3.5 3 0 0 3 3 3 1 zinc-ribbon domain DZR PF12773.7 gi|433639926|ref|YP_007285686.1| - 0.005 16.8 1.4 0.12 12.5 0.1 2.5 2 0 0 2 2 2 1 Double zinc ribbon TFIIS_C PF01096.18 gi|433639926|ref|YP_007285686.1| - 0.011 15.6 0.7 0.058 13.2 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Zn-ribbon_8 PF09723.10 gi|433639926|ref|YP_007285686.1| - 0.016 15.3 3.1 3.1 8.0 0.0 3.3 3 0 0 3 3 3 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|433639926|ref|YP_007285686.1| - 0.092 13.1 1.9 5.4 7.5 0.0 2.4 2 0 0 2 2 2 0 Restriction alleviation protein Lar DnaJ_CXXCXGXG PF00684.19 gi|433639926|ref|YP_007285686.1| - 0.12 12.8 1.3 0.39 11.1 0.1 2.1 2 0 0 2 2 2 0 DnaJ central domain Hexokinase_1 PF00349.21 gi|433639926|ref|YP_007285686.1| - 0.21 11.4 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 Hexokinase UPF0547 PF10571.9 gi|433639926|ref|YP_007285686.1| - 0.26 11.4 5.2 2.3 8.4 0.1 3.1 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1595 PF12760.7 gi|433639926|ref|YP_007285686.1| - 2.5 8.1 7.8 8.5 6.5 2.1 2.8 3 1 0 3 3 3 0 Transposase zinc-ribbon domain PHD PF00628.29 gi|433639926|ref|YP_007285686.1| - 2.9 7.9 6.5 0.38 10.7 1.0 2.2 3 0 0 3 3 3 0 PHD-finger zinc_ribbon_4 PF13717.6 gi|433639926|ref|YP_007285686.1| - 4.7 7.2 6.7 26 4.8 0.0 3.2 3 0 0 3 3 3 0 zinc-ribbon domain ABC_tran PF00005.27 gi|433639927|ref|YP_007285687.1| - 4.2e-26 92.1 0.0 6.9e-26 91.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639927|ref|YP_007285687.1| - 1.8e-13 51.0 0.0 6.1e-08 32.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|433639927|ref|YP_007285687.1| - 8.3e-05 23.2 0.0 0.00022 21.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|433639927|ref|YP_007285687.1| - 0.0028 17.4 0.0 0.0066 16.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|433639927|ref|YP_007285687.1| - 0.0046 16.4 0.0 2 7.8 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433639927|ref|YP_007285687.1| - 0.0052 16.5 0.1 0.012 15.3 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433639927|ref|YP_007285687.1| - 0.0067 16.9 0.1 0.012 16.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|433639927|ref|YP_007285687.1| - 0.099 13.0 0.1 0.16 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 gi|433639927|ref|YP_007285687.1| - 0.25 11.0 0.0 1.6 8.4 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain ABC2_membrane_2 PF12679.7 gi|433639928|ref|YP_007285688.1| - 1.3e-36 126.3 16.7 4.4e-36 124.7 16.7 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|433639928|ref|YP_007285688.1| - 2.7e-06 26.8 14.0 2.7e-06 26.8 14.0 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|433639928|ref|YP_007285688.1| - 0.00034 20.6 9.2 0.00034 20.6 9.2 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|433639928|ref|YP_007285688.1| - 0.001 18.7 7.5 0.001 18.7 7.5 2.1 1 1 0 2 2 2 1 ABC-2 family transporter protein DUF2208 PF09973.9 gi|433639928|ref|YP_007285688.1| - 0.23 11.0 1.1 0.5 9.9 1.1 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF2976 PF11190.8 gi|433639928|ref|YP_007285688.1| - 1.7 8.5 11.5 14 5.6 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) HTH_10 PF04967.12 gi|433639929|ref|YP_007285689.1| - 1.5e-19 69.5 0.1 2.7e-19 68.7 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433639929|ref|YP_007285689.1| - 6.8e-06 26.0 8.1 1.6e-05 24.8 8.1 1.7 1 1 0 1 1 1 1 GAF and HTH_10 associated domain DUF2218 PF09981.9 gi|433639929|ref|YP_007285689.1| - 0.031 14.7 0.1 0.6 10.5 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2218) Radical_SAM PF04055.21 gi|433639930|ref|YP_007285690.1| - 1.8e-17 64.2 0.0 4e-17 63.1 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|433639930|ref|YP_007285690.1| - 0.00013 22.2 0.0 0.00022 21.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|433639930|ref|YP_007285690.1| - 0.0011 19.1 0.0 0.0019 18.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|433639930|ref|YP_007285690.1| - 0.0019 18.7 0.0 0.0047 17.4 0.0 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain TP_methylase PF00590.20 gi|433639930|ref|YP_007285690.1| - 0.0085 16.1 0.0 0.063 13.2 0.0 2.1 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TAT_signal PF10518.9 gi|433639931|ref|YP_007285691.1| - 0.048 13.5 5.4 0.12 12.3 5.4 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|433639931|ref|YP_007285691.1| - 0.15 11.4 2.2 0.33 10.3 2.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal COX1 PF00115.20 gi|433639933|ref|YP_007285693.1| - 2.8e-05 23.2 44.3 0.029 13.2 13.2 3.9 1 1 2 3 3 3 3 Cytochrome C and Quinol oxidase polypeptide I DUF2249 PF10006.9 gi|433639935|ref|YP_007285695.1| - 1.6e-21 76.0 0.2 1.8e-21 75.8 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) HTH_20 PF12840.7 gi|433639936|ref|YP_007285696.1| - 2.3e-14 53.2 1.4 4e-14 52.4 1.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|433639936|ref|YP_007285696.1| - 1.5e-08 34.4 1.4 2.6e-08 33.6 0.7 1.8 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|433639936|ref|YP_007285696.1| - 5.5e-08 32.6 0.1 8.9e-08 31.9 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|433639936|ref|YP_007285696.1| - 6.5e-07 29.2 0.0 1.2e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|433639936|ref|YP_007285696.1| - 2.5e-06 27.2 0.3 5.2e-06 26.2 0.3 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|433639936|ref|YP_007285696.1| - 2e-05 24.1 0.1 5.7e-05 22.6 0.1 1.8 1 1 1 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|433639936|ref|YP_007285696.1| - 2.9e-05 23.9 0.0 4.6e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|433639936|ref|YP_007285696.1| - 6.3e-05 23.1 0.0 9.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|433639936|ref|YP_007285696.1| - 7.3e-05 22.7 0.1 0.00011 22.2 0.1 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|433639936|ref|YP_007285696.1| - 0.00023 20.9 0.2 0.00077 19.2 0.2 1.9 1 1 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_7 PF02796.15 gi|433639936|ref|YP_007285696.1| - 0.00025 21.0 0.0 0.00038 20.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_27 PF13463.6 gi|433639936|ref|YP_007285696.1| - 0.00033 21.1 0.1 0.00048 20.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Tnp_ISL3 PF13542.6 gi|433639936|ref|YP_007285696.1| - 0.00048 19.5 0.4 0.00086 18.7 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|433639936|ref|YP_007285696.1| - 0.0005 20.0 0.1 0.0011 18.9 0.1 1.5 1 1 1 2 2 2 1 Helix-turn-helix domain FUR PF01475.19 gi|433639936|ref|YP_007285696.1| - 0.00077 19.6 0.0 0.00096 19.3 0.0 1.2 1 0 0 1 1 1 1 Ferric uptake regulator family PadR PF03551.14 gi|433639936|ref|YP_007285696.1| - 0.00094 19.1 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_5 PF01022.20 gi|433639936|ref|YP_007285696.1| - 0.001 18.9 0.0 0.0016 18.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.6 gi|433639936|ref|YP_007285696.1| - 0.0018 18.0 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) GntR PF00392.21 gi|433639936|ref|YP_007285696.1| - 0.0022 17.6 0.4 0.0046 16.6 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|433639936|ref|YP_007285696.1| - 0.0024 18.2 0.0 0.004 17.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_29 PF13551.6 gi|433639936|ref|YP_007285696.1| - 0.0028 17.6 0.2 0.0053 16.8 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn helix DprA_WH PF17782.1 gi|433639936|ref|YP_007285696.1| - 0.0042 17.2 0.6 0.011 15.9 0.6 1.6 1 0 0 1 1 1 1 DprA winged helix domain LexA_DNA_bind PF01726.16 gi|433639936|ref|YP_007285696.1| - 0.0076 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 LexA DNA binding domain HTH_23 PF13384.6 gi|433639936|ref|YP_007285696.1| - 0.012 15.4 1.6 0.073 12.9 0.2 2.5 3 0 0 3 3 3 0 Homeodomain-like domain HTH_DeoR PF08220.12 gi|433639936|ref|YP_007285696.1| - 0.013 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_38 PF13936.6 gi|433639936|ref|YP_007285696.1| - 0.016 15.0 0.1 0.029 14.1 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|433639936|ref|YP_007285696.1| - 0.033 14.3 0.0 0.04 14.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) LPD22 PF18834.1 gi|433639936|ref|YP_007285696.1| - 0.06 13.6 0.2 0.084 13.1 0.2 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 22 TetR_N PF00440.23 gi|433639936|ref|YP_007285696.1| - 0.073 12.9 0.1 0.27 11.1 0.1 2.1 2 1 0 2 2 2 0 Bacterial regulatory proteins, tetR family YesK PF14150.6 gi|433639937|ref|YP_007285697.1| - 0.057 13.6 5.3 0.061 13.5 5.3 1.0 1 0 0 1 1 1 0 YesK-like protein Piezo_RRas_bdg PF12166.8 gi|433639937|ref|YP_007285697.1| - 0.064 12.5 0.1 0.077 12.3 0.1 1.1 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain COX1 PF00115.20 gi|433639938|ref|YP_007285698.1| - 2.1e-86 290.5 65.5 2.1e-86 290.5 65.5 2.0 1 1 1 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I HTH_IclR PF09339.10 gi|433639938|ref|YP_007285698.1| - 0.11 12.3 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain COX2 PF00116.20 gi|433639939|ref|YP_007285699.1| - 7.5e-12 45.2 0.0 9.3e-12 44.9 0.0 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 gi|433639939|ref|YP_007285699.1| - 0.0007 19.7 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Cupredoxin-like domain COX2-transmemb PF09125.10 gi|433639939|ref|YP_007285699.1| - 0.0016 18.1 0.4 0.0026 17.5 0.4 1.2 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane DUF4131 PF13567.6 gi|433639941|ref|YP_007285701.1| - 0.12 12.0 0.7 0.12 12.0 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) E1-E2_ATPase PF00122.20 gi|433639942|ref|YP_007285702.1| - 1.7e-40 138.5 3.1 4e-40 137.3 3.1 1.6 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433639942|ref|YP_007285702.1| - 3.4e-32 112.4 3.8 3.4e-32 112.4 3.8 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433639942|ref|YP_007285702.1| - 5.6e-09 36.3 0.0 3.2e-08 33.9 0.0 2.4 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|433639942|ref|YP_007285702.1| - 3.8e-05 23.6 0.3 6.3e-05 22.8 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ATPase-cat_bd PF12156.8 gi|433639942|ref|YP_007285702.1| - 0.09 13.5 0.0 0.22 12.3 0.0 1.5 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DsbD PF02683.15 gi|433639943|ref|YP_007285703.1| - 2.8e-11 43.7 15.9 3.7e-11 43.3 15.9 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Redoxin PF08534.10 gi|433639944|ref|YP_007285704.1| - 1.8e-05 24.5 0.3 7.7e-05 22.4 0.3 1.8 1 1 0 1 1 1 1 Redoxin Thioredoxin PF00085.20 gi|433639944|ref|YP_007285704.1| - 0.00035 20.5 0.1 0.00075 19.4 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 gi|433639944|ref|YP_007285704.1| - 0.00048 20.0 0.0 0.042 13.8 0.0 2.1 2 0 0 2 2 2 2 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|433639944|ref|YP_007285704.1| - 0.03 14.7 0.0 0.047 14.0 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin-like SCO1-SenC PF02630.14 gi|433639944|ref|YP_007285704.1| - 0.14 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 SCO1/SenC SCO1-SenC PF02630.14 gi|433639945|ref|YP_007285705.1| - 5e-11 42.7 0.0 5.6e-10 39.2 0.0 2.2 2 1 0 2 2 2 1 SCO1/SenC Metallophos_2 PF12850.7 gi|433639946|ref|YP_007285706.1| - 3.2e-25 89.3 0.3 3.7e-25 89.0 0.3 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Trypsin_2 PF13365.6 gi|433639947|ref|YP_007285707.1| - 4.1e-27 95.9 4.6 4.1e-27 95.9 4.6 2.1 3 0 0 3 3 3 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|433639947|ref|YP_007285707.1| - 9.8e-15 54.7 2.1 9.8e-15 54.7 2.1 2.7 2 1 0 2 2 2 1 PDZ domain Trypsin PF00089.26 gi|433639947|ref|YP_007285707.1| - 1.4e-09 38.1 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 gi|433639947|ref|YP_007285707.1| - 0.0013 18.6 0.2 0.003 17.5 0.2 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain PDZ_6 PF17820.1 gi|433639947|ref|YP_007285707.1| - 0.011 15.6 1.7 0.018 14.9 0.1 2.1 2 0 0 2 2 2 0 PDZ domain PDZ PF00595.24 gi|433639947|ref|YP_007285707.1| - 0.81 10.1 6.0 9.4 6.7 0.0 3.4 4 0 0 4 4 4 0 PDZ domain BofA PF07441.11 gi|433639948|ref|YP_007285708.1| - 2.8e-10 40.2 19.1 3.3e-10 40.0 19.1 1.1 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Pentapeptide PF00805.22 gi|433639950|ref|YP_007285710.1| - 4.8e-48 160.3 24.0 3.2e-09 36.3 0.8 7.9 6 1 1 7 7 7 7 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 gi|433639950|ref|YP_007285710.1| - 1.4e-39 134.1 6.8 3e-12 46.5 0.6 4.8 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 gi|433639950|ref|YP_007285710.1| - 3.9e-33 113.3 32.9 8.8e-08 32.2 1.5 8.1 3 2 5 8 8 8 7 Pentapeptide repeats (9 copies) Ion_trans_2 PF07885.16 gi|433639950|ref|YP_007285710.1| - 5.1e-06 26.4 2.9 9.5e-06 25.5 2.9 1.5 1 0 0 1 1 1 1 Ion channel TbpB_B_D PF01298.18 gi|433639950|ref|YP_007285710.1| - 0.41 11.0 4.8 2.7 8.4 0.0 3.2 2 1 1 3 3 3 0 C-lobe and N-lobe beta barrels of Tf-binding protein B PLDc_2 PF13091.6 gi|433639951|ref|YP_007285711.1| - 8.8e-16 58.0 0.0 1.3e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 gi|433639951|ref|YP_007285711.1| - 3.9e-06 26.8 0.1 7.9e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 Phospholipase D Active site motif Big_3_4 PF13754.6 gi|433639951|ref|YP_007285711.1| - 0.015 15.0 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function Helicase_C PF00271.31 gi|433639953|ref|YP_007285713.1| - 1e-09 38.7 0.0 2.3e-09 37.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|433639953|ref|YP_007285713.1| - 3.9e-06 26.7 0.0 0.039 13.7 0.0 2.6 2 0 0 2 2 2 2 DEAD/DEAH box helicase KicB PF03882.14 gi|433639953|ref|YP_007285713.1| - 0.12 12.6 0.1 0.35 11.1 0.1 1.7 1 0 0 1 1 1 0 MukF winged-helix domain PG_binding_3 PF09374.10 gi|433639954|ref|YP_007285714.1| - 0.08 13.2 0.0 0.28 11.5 0.0 1.9 1 0 0 1 1 1 0 Predicted Peptidoglycan domain Adaptin_N PF01602.20 gi|433639954|ref|YP_007285714.1| - 0.1 11.1 0.1 0.33 9.5 0.0 1.8 2 0 0 2 2 2 0 Adaptin N terminal region HhH-GPD PF00730.25 gi|433639959|ref|YP_007285719.1| - 2.2e-11 44.2 0.0 2.8e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|433639959|ref|YP_007285719.1| - 0.00049 19.8 0.0 0.08 12.8 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_methylase PF00145.17 gi|433639960|ref|YP_007285720.1| - 1.2e-44 153.0 0.0 1.5e-44 152.7 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Methyltransf_25 PF13649.6 gi|433639960|ref|YP_007285720.1| - 0.12 13.1 0.1 0.32 11.7 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|433639960|ref|YP_007285720.1| - 0.2 11.2 0.0 0.34 10.5 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PEP-utilisers_N PF05524.13 gi|433639963|ref|YP_007285723.1| - 0.029 14.5 0.4 1.7 8.9 0.2 2.2 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal PIN PF01850.21 gi|433639965|ref|YP_007285725.1| - 1.3e-09 38.6 0.2 1.5e-09 38.4 0.2 1.0 1 0 0 1 1 1 1 PIN domain DUF3568 PF12092.8 gi|433639965|ref|YP_007285725.1| - 0.18 11.9 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3568) DUF2188 PF09954.9 gi|433639966|ref|YP_007285726.1| - 0.11 12.7 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) DUF433 PF04255.14 gi|433639968|ref|YP_007285728.1| - 4.3e-14 52.1 0.1 6.5e-14 51.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF433) GP79 PF17463.2 gi|433639968|ref|YP_007285728.1| - 0.4 10.7 1.4 0.72 9.9 0.1 2.0 3 0 0 3 3 3 0 Gene product 79 DUF962 PF06127.11 gi|433639969|ref|YP_007285729.1| - 0.037 14.1 0.0 0.32 11.1 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF962) EamA PF00892.20 gi|433639970|ref|YP_007285730.1| - 8e-30 103.8 43.8 7.7e-21 74.7 15.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|433639970|ref|YP_007285730.1| - 0.045 13.1 5.8 0.085 12.2 5.6 1.6 1 1 0 1 1 1 0 Triose-phosphate Transporter family UAA PF08449.11 gi|433639970|ref|YP_007285730.1| - 0.16 11.1 4.0 0.31 10.2 4.0 1.6 1 0 0 1 1 1 0 UAA transporter family MFS_1 PF07690.16 gi|433639971|ref|YP_007285731.1| - 7.5e-43 146.8 38.6 2.3e-38 132.1 32.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 gi|433639971|ref|YP_007285731.1| - 6.8e-06 25.1 1.3 6.8e-06 25.1 1.3 2.1 2 0 0 2 2 2 1 LacY proton/sugar symporter OATP PF03137.20 gi|433639971|ref|YP_007285731.1| - 0.00093 17.6 4.6 0.18 10.0 0.1 2.8 2 1 0 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family Sugar_tr PF00083.24 gi|433639971|ref|YP_007285731.1| - 1.1 8.1 22.3 0.074 11.9 6.6 2.1 1 1 0 2 2 2 0 Sugar (and other) transporter DUF418 PF04235.12 gi|433639972|ref|YP_007285732.1| - 2.7e-43 147.7 13.3 2.7e-43 147.7 13.3 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF418) Peptidase_S8 PF00082.22 gi|433639973|ref|YP_007285733.1| - 3.2e-57 194.1 3.9 4.3e-57 193.6 3.9 1.1 1 0 0 1 1 1 1 Subtilase family fn3_5 PF06280.12 gi|433639973|ref|YP_007285733.1| - 7.4e-12 46.0 0.1 2.3e-11 44.4 0.1 1.9 1 0 0 1 1 1 1 Fn3-like domain PA PF02225.22 gi|433639973|ref|YP_007285733.1| - 3.2e-10 39.9 4.4 4.7e-10 39.3 0.9 2.9 2 0 0 2 2 2 1 PA domain FlgD_ig PF13860.6 gi|433639973|ref|YP_007285733.1| - 0.0032 17.3 0.4 0.27 11.1 0.0 3.0 2 0 0 2 2 2 1 FlgD Ig-like domain DUF916 PF06030.12 gi|433639973|ref|YP_007285733.1| - 0.069 13.2 0.0 0.64 10.1 0.0 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF916) DUF4232 PF14016.6 gi|433639973|ref|YP_007285733.1| - 0.077 13.1 10.2 0.94 9.6 0.3 3.8 2 1 0 3 3 3 0 Protein of unknown function (DUF4232) FixG_C PF11614.8 gi|433639973|ref|YP_007285733.1| - 0.13 12.4 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF11 PF01345.18 gi|433639973|ref|YP_007285733.1| - 1.4 9.3 8.3 0.28 11.5 2.8 2.8 3 0 0 3 3 3 0 Domain of unknown function DUF11 DUF3403 PF11883.8 gi|433639974|ref|YP_007285734.1| - 0.044 13.9 0.2 0.071 13.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) MazE_antitoxin PF04014.18 gi|433639976|ref|YP_007285736.1| - 1.4e-11 44.0 0.2 2.2e-11 43.4 0.0 1.4 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|433639976|ref|YP_007285736.1| - 5.9e-10 39.5 1.1 2.4e-09 37.5 0.1 1.8 1 1 1 2 2 2 1 prlF antitoxin for toxin YhaV_toxin PIN PF01850.21 gi|433639977|ref|YP_007285737.1| - 7.8e-15 55.5 1.4 8.8e-15 55.3 1.4 1.0 1 0 0 1 1 1 1 PIN domain Methyltransf_3 PF01596.17 gi|433639978|ref|YP_007285738.1| - 1.5e-14 53.7 0.0 1.9e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|433639978|ref|YP_007285738.1| - 1.5e-14 54.9 0.8 2.2e-14 54.4 0.1 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433639978|ref|YP_007285738.1| - 3.1e-05 23.8 0.0 4.1e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_20 PF12147.8 gi|433639978|ref|YP_007285738.1| - 0.026 13.7 0.2 0.056 12.6 0.0 1.5 2 0 0 2 2 2 0 Putative methyltransferase PucR PF07905.11 gi|433639978|ref|YP_007285738.1| - 0.026 14.8 0.0 0.055 13.7 0.0 1.5 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family PCMT PF01135.19 gi|433639978|ref|YP_007285738.1| - 0.087 12.6 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MmgE_PrpD PF03972.14 gi|433639979|ref|YP_007285739.1| - 3.3e-121 404.9 3.7 4e-121 404.6 3.7 1.0 1 0 0 1 1 1 1 MmgE/PrpD family ComA PF02679.15 gi|433639980|ref|YP_007285740.1| - 8.5e-79 264.4 0.0 9.7e-79 264.2 0.0 1.0 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) Hydantoinase_A PF01968.18 gi|433639980|ref|YP_007285740.1| - 0.13 11.5 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase TPP_enzyme_N PF02776.18 gi|433639981|ref|YP_007285741.1| - 4e-51 173.1 0.7 4e-51 173.1 0.7 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|433639981|ref|YP_007285741.1| - 4.6e-34 117.1 0.2 9e-34 116.2 0.2 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|433639981|ref|YP_007285741.1| - 7.9e-32 110.2 0.2 2.2e-31 108.7 0.1 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABC_tran PF00005.27 gi|433639982|ref|YP_007285742.1| - 2.8e-28 99.1 0.0 4.3e-28 98.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639982|ref|YP_007285742.1| - 1.3e-13 51.5 1.4 1.4e-08 35.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433639982|ref|YP_007285742.1| - 9.9e-05 21.9 0.1 0.39 10.1 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|433639982|ref|YP_007285742.1| - 0.0008 19.1 0.2 0.0019 17.9 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|433639982|ref|YP_007285742.1| - 0.0028 18.2 0.0 0.0039 17.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|433639982|ref|YP_007285742.1| - 0.0069 16.8 1.4 0.19 12.1 1.4 2.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|433639982|ref|YP_007285742.1| - 0.016 14.9 0.0 4.8 6.8 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain AAA_16 PF13191.6 gi|433639982|ref|YP_007285742.1| - 0.045 14.1 1.2 0.24 11.8 1.2 2.3 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|433639982|ref|YP_007285742.1| - 0.073 13.0 0.3 0.16 11.9 0.1 1.6 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 gi|433639982|ref|YP_007285742.1| - 0.079 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 NTPase AAA_24 PF13479.6 gi|433639982|ref|YP_007285742.1| - 0.1 12.3 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|433639982|ref|YP_007285742.1| - 0.14 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|433639982|ref|YP_007285742.1| - 0.18 11.3 0.0 0.36 10.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|433639982|ref|YP_007285742.1| - 0.22 10.6 0.3 0.48 9.6 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain OST3_OST6 PF04756.13 gi|433639985|ref|YP_007285745.1| - 1.6 8.0 6.2 3.6 6.8 0.0 2.5 2 1 0 3 3 3 0 OST3 / OST6 family, transporter family DUF2254 PF10011.9 gi|433639985|ref|YP_007285745.1| - 3.1 6.5 10.3 9.1 5.0 9.5 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2254) ABC_tran PF00005.27 gi|433639986|ref|YP_007285746.1| - 2.7e-24 86.2 0.0 4e-24 85.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|433639986|ref|YP_007285746.1| - 2.7e-11 43.9 0.8 3.3e-08 33.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433639986|ref|YP_007285746.1| - 7.3e-07 28.8 0.0 0.0004 19.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain Nitroreductase PF00881.24 gi|433639987|ref|YP_007285747.1| - 3.2e-15 56.6 0.0 5.7e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Nitroreductase family ThiF PF00899.21 gi|433639988|ref|YP_007285748.1| - 7.6e-09 35.3 0.0 3.4e-08 33.2 0.0 1.8 2 0 0 2 2 2 1 ThiF family YcaO PF02624.16 gi|433639989|ref|YP_007285749.1| - 5.5e-63 213.2 0.1 6.4e-63 213.0 0.1 1.0 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding DUF1833 PF08875.11 gi|433639989|ref|YP_007285749.1| - 0.077 12.5 0.1 0.18 11.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1833) CPBP PF02517.16 gi|433639990|ref|YP_007285750.1| - 1.9e-13 50.6 11.9 6.4e-13 48.9 11.9 2.0 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease Transket_pyr PF02779.24 gi|433639991|ref|YP_007285751.1| - 7.6e-48 162.5 0.0 1.1e-47 162.0 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|433639991|ref|YP_007285751.1| - 3e-39 133.7 0.1 7.3e-39 132.5 0.1 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain E1_dh PF00676.20 gi|433639992|ref|YP_007285752.1| - 7.8e-69 231.9 0.0 9.8e-69 231.6 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|433639992|ref|YP_007285752.1| - 3.9e-06 26.7 0.4 1.4e-05 24.9 0.4 1.8 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|433639992|ref|YP_007285752.1| - 1.9e-05 24.0 0.0 2.8e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase DUF4235 PF14019.6 gi|433639993|ref|YP_007285753.1| - 0.042 13.9 0.3 5.3 7.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) Nop14 PF04147.12 gi|433639993|ref|YP_007285753.1| - 5 5.2 35.2 5.4 5.1 35.2 1.2 1 0 0 1 1 1 0 Nop14-like family Vut_1 PF02592.15 gi|433639995|ref|YP_007285755.1| - 2.5e-45 154.5 5.7 2.5e-45 154.5 5.7 1.6 2 0 0 2 2 2 1 Putative vitamin uptake transporter Peptidase_M29 PF02073.15 gi|433639996|ref|YP_007285756.1| - 9.7e-58 195.9 0.0 1.2e-57 195.6 0.0 1.0 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) Ribosomal_L40e PF01020.17 gi|433639997|ref|YP_007285757.1| - 6.6e-07 29.1 4.0 8.1e-07 28.8 4.0 1.2 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|433639997|ref|YP_007285757.1| - 0.0033 17.1 4.2 0.0044 16.7 4.2 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|433639997|ref|YP_007285757.1| - 0.0041 17.1 0.9 0.0046 17.0 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-CHY PF05495.12 gi|433639997|ref|YP_007285757.1| - 0.008 16.7 0.6 0.0081 16.6 0.6 1.1 1 0 0 1 1 1 1 CHY zinc finger zf-ribbon_3 PF13248.6 gi|433639997|ref|YP_007285757.1| - 0.11 11.9 2.6 0.14 11.6 2.6 1.2 1 0 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|433639997|ref|YP_007285757.1| - 0.31 10.8 7.5 0.61 9.8 7.5 1.5 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_10 PF10058.9 gi|433639997|ref|YP_007285757.1| - 0.71 9.6 5.6 7.8 6.3 5.6 2.0 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein GATase PF00117.28 gi|433639999|ref|YP_007285759.1| - 4.8e-20 72.1 0.0 1.1e-19 71.0 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|433639999|ref|YP_007285759.1| - 4.1e-06 26.5 0.0 1.2e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|433639999|ref|YP_007285759.1| - 0.00018 21.4 0.0 0.05 13.4 0.0 2.1 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|433639999|ref|YP_007285759.1| - 0.00046 20.0 0.0 0.086 12.6 0.0 2.4 2 0 0 2 2 2 2 Peptidase C26 GATase_5 PF13507.6 gi|433639999|ref|YP_007285759.1| - 0.065 12.3 0.0 0.38 9.8 0.0 2.0 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|433639999|ref|YP_007285759.1| - 0.074 12.9 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family UDG PF03167.19 gi|433640000|ref|YP_007285760.1| - 1e-36 126.3 0.0 1.2e-36 126.0 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HTH_24 PF13412.6 gi|433640001|ref|YP_007285761.1| - 3.5e-05 23.3 0.0 5.5e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF2250 PF10007.9 gi|433640001|ref|YP_007285761.1| - 0.071 13.2 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF99 PF01949.16 gi|433640002|ref|YP_007285762.1| - 1.3e-57 194.1 0.1 1.5e-57 194.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 Lactamase_B PF00753.27 gi|433640004|ref|YP_007285764.1| - 6.9e-13 49.1 11.2 3.2e-10 40.4 11.2 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433640004|ref|YP_007285764.1| - 1.6e-05 24.5 4.9 0.00057 19.5 4.9 2.2 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|433640004|ref|YP_007285764.1| - 0.1 12.5 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Radical_SAM PF04055.21 gi|433640004|ref|YP_007285764.1| - 0.2 12.0 0.7 2.4 8.5 0.0 2.0 1 1 1 2 2 2 0 Radical SAM superfamily Beta_propel PF09826.9 gi|433640006|ref|YP_007285766.1| - 2.2e-94 317.2 0.0 2.6e-93 313.7 0.0 2.0 1 1 0 1 1 1 1 Beta propeller domain Thiolase_N PF00108.23 gi|433640008|ref|YP_007285768.1| - 2.3e-74 250.1 0.4 3.1e-74 249.6 0.4 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|433640008|ref|YP_007285768.1| - 2.6e-42 143.3 0.1 1.2e-41 141.1 0.0 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|433640008|ref|YP_007285768.1| - 6.3e-06 25.9 0.3 2.1e-05 24.2 0.0 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|433640008|ref|YP_007285768.1| - 0.0073 16.1 5.2 0.068 13.0 0.1 2.7 3 0 0 3 3 3 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YfhD PF14151.6 gi|433640008|ref|YP_007285768.1| - 6.3 7.0 7.8 37 4.5 3.5 2.5 2 0 0 2 2 2 0 YfhD-like protein Phage_holin_Dp1 PF16938.5 gi|433640010|ref|YP_007285770.1| - 3.8 7.8 5.5 2.9 8.2 1.2 2.5 2 0 0 2 2 2 0 Putative phage holin Dp-1 PRA-PH PF01503.17 gi|433640011|ref|YP_007285771.1| - 0.029 14.8 1.6 0.051 14.0 1.6 1.6 1 1 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase Vps52 PF04129.12 gi|433640011|ref|YP_007285771.1| - 0.098 11.4 0.2 0.11 11.2 0.2 1.0 1 0 0 1 1 1 0 Vps52 / Sac2 family YdjM PF04307.14 gi|433640012|ref|YP_007285772.1| - 1.1e-11 44.4 4.0 1.3e-11 44.1 4.0 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase PsaM PF07465.13 gi|433640012|ref|YP_007285772.1| - 0.045 13.5 0.9 0.045 13.5 0.9 2.2 3 0 0 3 3 3 0 Photosystem I protein M (PsaM) AMP-binding PF00501.28 gi|433640013|ref|YP_007285773.1| - 2.3e-95 319.7 0.0 2.8e-95 319.4 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|433640013|ref|YP_007285773.1| - 0.054 14.5 0.7 0.25 12.4 0.7 2.2 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain Lactamase_B PF00753.27 gi|433640014|ref|YP_007285774.1| - 9.1e-25 87.8 7.8 9.1e-25 87.8 7.8 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|433640014|ref|YP_007285774.1| - 2.2e-07 30.6 5.2 2.8e-07 30.3 3.2 2.2 1 1 2 3 3 3 1 Beta-lactamase superfamily domain TF_Zn_Ribbon PF08271.12 gi|433640015|ref|YP_007285775.1| - 0.00092 18.7 2.6 0.00092 18.7 0.6 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding zf_UBZ PF18439.1 gi|433640015|ref|YP_007285775.1| - 0.014 14.9 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger A2L_zn_ribbon PF08792.10 gi|433640015|ref|YP_007285775.1| - 0.026 14.2 0.1 0.047 13.4 0.1 1.4 1 0 0 1 1 1 0 A2L zinc ribbon domain Ribosomal_S27e PF01667.17 gi|433640015|ref|YP_007285775.1| - 0.03 14.0 0.1 0.039 13.7 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 zf-RRN7 PF11781.8 gi|433640015|ref|YP_007285775.1| - 0.072 12.8 0.8 0.072 12.8 0.8 1.8 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Fascin PF06268.13 gi|433640015|ref|YP_007285775.1| - 0.11 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Fascin domain CRCB PF02537.15 gi|433640016|ref|YP_007285776.1| - 1.6e-17 63.5 10.3 2.1e-17 63.2 10.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) CRCB PF02537.15 gi|433640017|ref|YP_007285777.1| - 4.9e-22 78.0 7.7 6e-22 77.8 7.7 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) ALAD PF00490.21 gi|433640018|ref|YP_007285778.1| - 2e-138 460.9 0.0 3.6e-138 460.1 0.0 1.4 1 1 0 1 1 1 1 Delta-aminolevulinic acid dehydratase DUF4878 PF12870.7 gi|433640019|ref|YP_007285779.1| - 0.04 14.2 0.4 0.056 13.8 0.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4878) TAT_signal PF10518.9 gi|433640019|ref|YP_007285779.1| - 0.15 12.0 2.4 0.23 11.4 2.4 1.3 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Aminotran_3 PF00202.21 gi|433640020|ref|YP_007285780.1| - 3.8e-68 230.0 0.0 4.7e-68 229.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|433640020|ref|YP_007285780.1| - 0.015 14.5 0.0 0.032 13.4 0.0 1.5 2 0 0 2 2 2 0 Aminotransferase class I and II Neuregulin PF02158.15 gi|433640020|ref|YP_007285780.1| - 0.16 11.3 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 Neuregulin intracellular region Xan_ur_permease PF00860.20 gi|433640022|ref|YP_007285782.1| - 5.6e-78 262.3 39.6 3.3e-77 259.8 39.6 2.0 1 1 0 1 1 1 1 Permease family Bap31 PF05529.12 gi|433640022|ref|YP_007285782.1| - 0.16 11.8 0.3 6.4 6.6 0.0 2.4 2 0 0 2 2 2 0 Bap31/Bap29 transmembrane region PS-DH PF14765.6 gi|433640023|ref|YP_007285783.1| - 0.052 12.8 0.1 0.067 12.4 0.1 1.2 1 0 0 1 1 1 0 Polyketide synthase dehydratase Porphobil_deam PF01379.20 gi|433640024|ref|YP_007285784.1| - 1.3e-61 207.7 0.1 6.1e-49 166.3 0.1 2.3 2 0 0 2 2 2 2 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|433640024|ref|YP_007285784.1| - 1.3e-08 35.1 0.0 4e-08 33.5 0.0 1.9 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain HEM4 PF02602.15 gi|433640025|ref|YP_007285785.1| - 2.6e-43 148.1 4.8 3.2e-43 147.8 4.8 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD DUF1129 PF06570.11 gi|433640026|ref|YP_007285786.1| - 1.8 8.0 5.1 0.57 9.6 0.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1129) DHHA1 PF02272.19 gi|433640027|ref|YP_007285787.1| - 2.7e-19 69.9 0.1 5.4e-19 69.0 0.1 1.5 1 0 0 1 1 1 1 DHHA1 domain DUF5605 PF18310.1 gi|433640029|ref|YP_007285789.1| - 0.12 12.3 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) NifU PF01106.17 gi|433640030|ref|YP_007285790.1| - 6e-14 52.0 0.0 8.5e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 NifU-like domain ApbA_C PF08546.11 gi|433640031|ref|YP_007285791.1| - 8.8e-36 122.9 0.2 1.2e-35 122.4 0.2 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 gi|433640031|ref|YP_007285791.1| - 8.6e-29 100.2 0.0 1.4e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|433640031|ref|YP_007285791.1| - 0.037 14.3 0.6 0.11 12.7 0.1 2.1 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain HypA PF01155.19 gi|433640032|ref|YP_007285792.1| - 0.0027 17.7 0.0 0.0033 17.4 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|433640032|ref|YP_007285792.1| - 0.005 16.3 1.3 0.79 9.3 0.1 2.4 2 0 0 2 2 2 1 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|433640032|ref|YP_007285792.1| - 0.0062 16.2 6.0 0.045 13.5 0.4 2.2 1 1 1 2 2 2 1 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 gi|433640032|ref|YP_007285792.1| - 0.011 15.1 1.3 0.56 9.7 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HalOD2 PF18547.1 gi|433640032|ref|YP_007285792.1| - 0.012 15.5 4.2 0.047 13.6 0.1 2.7 3 0 0 3 3 3 0 Halobacterial output domain 2 Zn-ribbon_8 PF09723.10 gi|433640032|ref|YP_007285792.1| - 0.013 15.6 0.7 0.023 14.8 0.7 1.5 1 0 0 1 1 1 0 Zinc ribbon domain Rubredoxin PF00301.20 gi|433640032|ref|YP_007285792.1| - 0.017 15.1 0.1 3.4 7.8 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin zinc_ribbon_2 PF13240.6 gi|433640032|ref|YP_007285792.1| - 0.023 14.4 6.2 0.4 10.5 0.8 2.3 2 0 0 2 2 2 0 zinc-ribbon domain BPL_C PF02237.17 gi|433640032|ref|YP_007285792.1| - 0.036 14.0 0.5 0.085 12.8 0.5 1.6 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain zf-ISL3 PF14690.6 gi|433640032|ref|YP_007285792.1| - 0.058 14.1 0.6 2.3 8.9 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_ribbon_SprT PF17283.2 gi|433640032|ref|YP_007285792.1| - 0.069 13.1 1.4 3.4 7.7 0.0 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|433640032|ref|YP_007285792.1| - 0.085 12.9 1.5 0.37 10.8 1.5 1.6 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|433640032|ref|YP_007285792.1| - 0.12 12.3 1.7 14 5.7 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain NRDD PF13597.6 gi|433640032|ref|YP_007285792.1| - 0.12 11.1 0.3 0.16 10.7 0.3 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase DNA_ligase_ZBD PF03119.16 gi|433640032|ref|YP_007285792.1| - 0.15 12.1 1.7 8 6.6 0.4 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DUF2072 PF09845.9 gi|433640032|ref|YP_007285792.1| - 0.27 11.5 0.9 0.43 10.8 0.9 1.3 1 0 0 1 1 1 0 Zn-ribbon containing protein OrfB_Zn_ribbon PF07282.11 gi|433640032|ref|YP_007285792.1| - 1 9.4 3.0 5.6 7.0 3.4 1.9 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-NADH-PPase PF09297.11 gi|433640032|ref|YP_007285792.1| - 1.8 8.3 4.9 12 5.7 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF1610 PF07754.11 gi|433640032|ref|YP_007285792.1| - 3.4 7.7 7.5 3.4 7.7 1.6 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-CCHC PF00098.23 gi|433640032|ref|YP_007285792.1| - 6.4 7.0 8.6 1.6 9.0 1.6 2.2 2 0 0 2 2 2 0 Zinc knuckle PolC_DP2 PF03833.13 gi|433640033|ref|YP_007285793.1| - 0 1309.8 0.0 0 1308.4 0.0 1.6 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 DZR PF12773.7 gi|433640033|ref|YP_007285793.1| - 0.0034 17.4 16.2 0.28 11.3 10.2 2.6 2 0 0 2 2 2 2 Double zinc ribbon HypA PF01155.19 gi|433640033|ref|YP_007285793.1| - 0.25 11.4 19.8 1.1 9.3 0.5 3.5 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|433640033|ref|YP_007285793.1| - 1.6 8.8 18.0 7.3 6.7 0.1 3.0 2 1 1 3 3 3 0 zinc-ribbons NRDD PF13597.6 gi|433640033|ref|YP_007285793.1| - 2.5 6.8 5.2 3.6 6.3 1.5 2.4 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase DUF296 PF03479.15 gi|433640034|ref|YP_007285794.1| - 7.9e-18 64.8 0.0 1e-17 64.4 0.0 1.0 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain DUF4129 PF13559.6 gi|433640034|ref|YP_007285794.1| - 0.021 15.1 1.5 0.055 13.7 1.5 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4129) SBP_bac_5 PF00496.22 gi|433640035|ref|YP_007285795.1| - 5.7e-51 173.6 1.9 7.9e-51 173.2 1.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 gi|433640035|ref|YP_007285795.1| - 0.21 11.5 3.6 0.39 10.6 3.6 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 gi|433640036|ref|YP_007285796.1| - 5.1e-41 140.4 10.7 5.1e-41 140.4 10.7 2.1 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component HTH_psq PF05225.16 gi|433640036|ref|YP_007285796.1| - 0.14 11.9 0.1 1 9.1 0.0 2.2 2 0 0 2 2 2 0 helix-turn-helix, Psq domain PIRT PF15099.6 gi|433640036|ref|YP_007285796.1| - 5.2 6.7 5.9 4.4 6.9 0.3 2.9 3 0 0 3 3 3 0 Phosphoinositide-interacting protein family BPD_transp_1 PF00528.22 gi|433640037|ref|YP_007285797.1| - 1.6e-30 106.3 6.8 1.6e-30 106.3 6.8 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|433640037|ref|YP_007285797.1| - 0.0032 17.4 1.8 0.025 14.5 0.0 3.2 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C CD99L2 PF12301.8 gi|433640037|ref|YP_007285797.1| - 0.16 12.3 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 CD99 antigen like protein 2 ABC_tran PF00005.27 gi|433640038|ref|YP_007285798.1| - 1.4e-25 90.4 0.0 2.5e-25 89.6 0.0 1.4 1 1 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433640038|ref|YP_007285798.1| - 2.5e-18 66.3 0.2 4.8e-18 65.5 0.2 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|433640038|ref|YP_007285798.1| - 6e-06 26.3 0.0 5.2e-05 23.2 0.0 1.9 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|433640038|ref|YP_007285798.1| - 0.012 15.1 0.0 0.13 11.7 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_5 PF07728.14 gi|433640038|ref|YP_007285798.1| - 0.079 13.0 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 gi|433640039|ref|YP_007285799.1| - 3.7e-31 108.5 0.0 5.3e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|433640039|ref|YP_007285799.1| - 1.9e-17 63.5 0.1 3.5e-17 62.7 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA PF00004.29 gi|433640039|ref|YP_007285799.1| - 0.0013 19.1 0.0 0.0043 17.5 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|433640039|ref|YP_007285799.1| - 0.0013 19.0 0.0 0.0052 17.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|433640039|ref|YP_007285799.1| - 0.0018 18.0 0.1 0.0035 17.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|433640039|ref|YP_007285799.1| - 0.0038 17.6 0.0 0.0069 16.8 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|433640039|ref|YP_007285799.1| - 0.004 16.6 0.0 0.0062 16.0 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|433640039|ref|YP_007285799.1| - 0.0049 16.7 0.0 1.8 8.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|433640039|ref|YP_007285799.1| - 0.011 15.6 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 gi|433640039|ref|YP_007285799.1| - 0.086 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 gi|433640039|ref|YP_007285799.1| - 0.11 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase CBS PF00571.28 gi|433640041|ref|YP_007285801.1| - 1.5e-32 111.9 10.6 1.8e-10 41.1 0.7 4.1 4 0 0 4 4 4 4 CBS domain HGTP_anticodon PF03129.20 gi|433640042|ref|YP_007285802.1| - 1.9e-21 76.0 0.0 4.2e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|433640042|ref|YP_007285802.1| - 1.5e-08 34.9 0.0 1e-07 32.1 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) zf-ribbon_3 PF13248.6 gi|433640042|ref|YP_007285802.1| - 0.0017 17.7 0.4 2.2 7.8 0.0 2.5 2 0 0 2 2 2 2 zinc-ribbon domain Ribosomal_L32p PF01783.23 gi|433640042|ref|YP_007285802.1| - 0.02 15.2 0.1 0.6 10.4 0.0 2.8 3 0 0 3 3 3 0 Ribosomal L32p protein family TF_Zn_Ribbon PF08271.12 gi|433640042|ref|YP_007285802.1| - 0.02 14.4 1.3 0.34 10.4 1.3 2.6 1 1 0 1 1 1 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|433640042|ref|YP_007285802.1| - 0.035 14.2 0.7 6.7 6.9 0.1 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|433640042|ref|YP_007285802.1| - 0.063 13.0 0.8 10 6.0 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|433640042|ref|YP_007285802.1| - 0.27 10.9 1.6 1.9 8.3 0.0 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Prok-RING_1 PF14446.6 gi|433640042|ref|YP_007285802.1| - 0.29 11.1 1.3 6.2 6.8 0.2 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 HTH_10 PF04967.12 gi|433640044|ref|YP_007285804.1| - 1.3e-14 53.7 0.0 2e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|433640044|ref|YP_007285804.1| - 3.3e-07 30.3 0.2 5e-07 29.7 0.2 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_24 PF13412.6 gi|433640044|ref|YP_007285804.1| - 6.9e-06 25.5 0.0 1.3e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|433640044|ref|YP_007285804.1| - 1.1e-05 25.0 0.1 3.7e-05 23.3 0.1 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|433640044|ref|YP_007285804.1| - 2e-05 24.0 0.1 3.5e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|433640044|ref|YP_007285804.1| - 0.0003 20.6 0.0 0.00059 19.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 gi|433640044|ref|YP_007285804.1| - 0.00036 20.3 0.2 0.00081 19.2 0.2 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_28 PF13518.6 gi|433640044|ref|YP_007285804.1| - 0.0078 16.3 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|433640044|ref|YP_007285804.1| - 0.0085 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 HTH domain Phage_CI_repr PF07022.13 gi|433640044|ref|YP_007285804.1| - 0.065 13.3 0.1 0.23 11.6 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain HTH_3 PF01381.22 gi|433640044|ref|YP_007285804.1| - 0.07 13.2 0.1 0.15 12.2 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix YdaS_antitoxin PF15943.5 gi|433640044|ref|YP_007285804.1| - 0.091 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_50 PF18024.1 gi|433640044|ref|YP_007285804.1| - 0.095 12.3 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|433640044|ref|YP_007285804.1| - 0.1 12.8 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_8 PF02954.19 gi|433640044|ref|YP_007285804.1| - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Sigma70_r3 PF04539.16 gi|433640044|ref|YP_007285804.1| - 0.15 12.2 0.1 0.41 10.8 0.0 1.7 2 0 0 2 2 2 0 Sigma-70 region 3 HalOD1 PF18545.1 gi|433640045|ref|YP_007285805.1| - 1.9e-24 85.7 0.5 2.3e-24 85.5 0.5 1.0 1 0 0 1 1 1 1 Halobacterial output domain 1 Flavin_Reduct PF01613.18 gi|433640046|ref|YP_007285806.1| - 2e-18 66.9 0.3 2.5e-18 66.6 0.3 1.1 1 0 0 1 1 1 1 Flavin reductase like domain zinc_ribbon_9 PF14369.6 gi|433640048|ref|YP_007285808.1| - 0.093 13.0 5.2 3.6 7.9 5.2 2.3 1 1 0 1 1 1 0 zinc-ribbon bPH_2 PF03703.14 gi|433640049|ref|YP_007285809.1| - 1.7e-05 24.9 0.0 5.4e-05 23.3 0.0 1.9 1 0 0 1 1 1 1 Bacterial PH domain CCB1 PF12046.8 gi|433640050|ref|YP_007285810.1| - 0.15 11.4 0.2 0.17 11.2 0.2 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B ERCC4 PF02732.15 gi|433640051|ref|YP_007285811.1| - 7.6e-23 81.4 0.1 2.6e-22 79.7 0.0 1.9 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.31 gi|433640051|ref|YP_007285811.1| - 4e-22 78.6 0.0 2.1e-21 76.3 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|433640051|ref|YP_007285811.1| - 1.2e-15 57.7 0.0 3.5e-15 56.2 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase HHH_5 PF14520.6 gi|433640051|ref|YP_007285811.1| - 6.1e-11 42.8 0.6 6.2e-10 39.5 0.1 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain ResIII PF04851.15 gi|433640051|ref|YP_007285811.1| - 6.9e-11 42.4 0.0 1.9e-10 41.0 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|433640051|ref|YP_007285811.1| - 2.4e-10 40.4 0.3 8.2e-10 38.7 0.1 2.0 2 0 0 2 2 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|433640051|ref|YP_007285811.1| - 8.5e-09 34.8 1.0 1.7e-06 27.6 0.1 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif MEDS PF14417.6 gi|433640051|ref|YP_007285811.1| - 0.0039 17.0 0.6 1.7 8.4 0.2 2.8 2 0 0 2 2 2 2 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 5_3_exonuc PF01367.20 gi|433640051|ref|YP_007285811.1| - 0.0096 16.5 0.0 0.11 13.1 0.0 2.6 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold DUF4407 PF14362.6 gi|433640051|ref|YP_007285811.1| - 0.0097 15.3 7.9 0.23 10.8 3.7 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4407) Helicase_C_2 PF13307.6 gi|433640051|ref|YP_007285811.1| - 0.099 12.8 0.2 0.7 10.0 0.0 2.3 1 1 1 2 2 2 0 Helicase C-terminal domain DUF4618 PF15397.6 gi|433640051|ref|YP_007285811.1| - 0.37 10.2 6.3 0.27 10.6 2.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4618) Prefoldin PF02996.17 gi|433640051|ref|YP_007285811.1| - 0.53 10.2 3.7 1.3 9.0 0.3 2.4 2 0 0 2 2 2 0 Prefoldin subunit Fez1 PF06818.15 gi|433640051|ref|YP_007285811.1| - 1.4 9.3 9.2 1.2 9.5 5.6 2.2 2 0 0 2 2 2 0 Fez1 TFIIB PF00382.19 gi|433640052|ref|YP_007285812.1| - 3.5e-28 97.5 0.0 6.8e-15 54.9 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|433640052|ref|YP_007285812.1| - 5.2e-09 35.5 3.8 1e-08 34.5 3.8 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 gi|433640052|ref|YP_007285812.1| - 0.0026 17.5 0.0 0.013 15.2 0.0 1.9 2 0 0 2 2 2 1 Cyclin, N-terminal domain TFIIB_C_1 PF18542.1 gi|433640052|ref|YP_007285812.1| - 0.083 12.9 0.4 0.72 9.9 0.0 2.3 2 0 0 2 2 2 0 Transcription factor IIB C-terminal module 1 Cyclin_C PF02984.19 gi|433640052|ref|YP_007285812.1| - 0.15 12.2 0.0 8.8 6.4 0.0 2.1 2 0 0 2 2 2 0 Cyclin, C-terminal domain RB_B PF01857.20 gi|433640052|ref|YP_007285812.1| - 0.24 11.4 0.0 0.43 10.6 0.0 1.3 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain SHOCT PF09851.9 gi|433640053|ref|YP_007285813.1| - 1.4e-09 37.3 0.7 2.6e-09 36.5 0.7 1.5 1 0 0 1 1 1 1 Short C-terminal domain GvpG PF05120.12 gi|433640053|ref|YP_007285813.1| - 0.0016 18.4 0.6 0.0023 17.9 0.6 1.2 1 0 0 1 1 1 1 Gas vesicle protein G DUF1707 PF08044.11 gi|433640053|ref|YP_007285813.1| - 0.002 18.2 2.2 0.002 18.2 2.2 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF1707) VbhA PF18495.1 gi|433640053|ref|YP_007285813.1| - 0.042 13.7 0.7 0.042 13.7 0.7 1.7 2 0 0 2 2 2 0 Antitoxin VbhA MCM PF00493.23 gi|433640054|ref|YP_007285814.1| - 6.4e-91 303.4 0.0 9.2e-91 302.9 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|433640054|ref|YP_007285814.1| - 2.4e-37 127.6 0.3 4.1e-37 126.8 0.3 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|433640054|ref|YP_007285814.1| - 2.5e-29 101.5 0.8 6.6e-29 100.2 0.8 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 gi|433640054|ref|YP_007285814.1| - 4.6e-10 39.2 0.0 1.7e-05 24.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM_N PF14551.6 gi|433640054|ref|YP_007285814.1| - 4.3e-08 33.7 2.8 1.1e-07 32.4 0.6 2.4 2 0 0 2 2 2 1 MCM N-terminal domain AAA_5 PF07728.14 gi|433640054|ref|YP_007285814.1| - 1.8e-06 28.0 0.0 4.6e-06 26.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|433640054|ref|YP_007285814.1| - 0.00054 20.4 4.1 0.00057 20.3 0.0 2.9 3 1 0 3 3 3 1 AAA ATPase domain Sigma54_activat PF00158.26 gi|433640054|ref|YP_007285814.1| - 0.00055 19.7 0.0 0.013 15.2 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA PF00004.29 gi|433640054|ref|YP_007285814.1| - 0.0048 17.3 0.0 0.017 15.6 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|433640054|ref|YP_007285814.1| - 0.015 15.0 0.9 0.079 12.7 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 gi|433640054|ref|YP_007285814.1| - 0.029 14.2 0.0 0.15 11.9 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|433640054|ref|YP_007285814.1| - 0.073 12.6 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF4072 PF13284.6 gi|433640054|ref|YP_007285814.1| - 0.1 13.1 1.7 0.39 11.2 1.7 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4072) T2SSF PF00482.23 gi|433640055|ref|YP_007285815.1| - 0.081 12.9 1.7 0.46 10.4 0.2 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein F Cas_Cas4 PF01930.17 gi|433640056|ref|YP_007285816.1| - 7.4e-05 22.9 0.2 0.00068 19.8 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|433640056|ref|YP_007285816.1| - 0.0095 15.9 1.4 0.017 15.1 0.0 2.0 2 1 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DUF4687 PF15747.5 gi|433640056|ref|YP_007285816.1| - 0.26 11.8 2.9 19 5.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4687) Sua5_yciO_yrdC PF01300.18 gi|433640057|ref|YP_007285817.1| - 9.6e-53 178.3 0.0 1.1e-52 178.1 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination AhpC-TSA PF00578.21 gi|433640058|ref|YP_007285818.1| - 5.7e-17 61.8 0.0 1.8e-11 44.1 0.0 2.1 2 0 0 2 2 2 2 AhpC/TSA family Redoxin PF08534.10 gi|433640058|ref|YP_007285818.1| - 2.3e-06 27.4 0.0 0.0004 20.1 0.0 2.1 2 0 0 2 2 2 2 Redoxin AhpC-TSA_2 PF13911.6 gi|433640058|ref|YP_007285818.1| - 0.0078 16.3 0.0 0.088 12.9 0.0 2.1 1 1 1 2 2 2 1 AhpC/TSA antioxidant enzyme GST_N_3 PF13417.6 gi|433640059|ref|YP_007285819.1| - 1.6e-13 50.9 0.0 1.8e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 gi|433640059|ref|YP_007285819.1| - 2.2e-13 50.2 0.0 3.1e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 gi|433640059|ref|YP_007285819.1| - 3.5e-10 40.0 0.0 4.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 gi|433640059|ref|YP_007285819.1| - 0.00017 21.9 0.0 0.00024 21.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|433640059|ref|YP_007285819.1| - 0.0071 16.7 0.0 0.0082 16.5 0.0 1.4 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DUF21 PF01595.20 gi|433640060|ref|YP_007285820.1| - 1.6e-50 171.3 0.2 2.3e-50 170.7 0.2 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|433640060|ref|YP_007285820.1| - 1.1e-20 73.4 0.8 3.1e-20 72.0 0.8 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|433640060|ref|YP_007285820.1| - 3.4e-13 49.8 5.8 2.3e-06 28.0 0.8 2.6 2 0 0 2 2 2 2 CBS domain WSS_VP PF12175.8 gi|433640060|ref|YP_007285820.1| - 0.025 14.0 1.0 0.056 12.9 1.0 1.5 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP MFS_1 PF07690.16 gi|433640060|ref|YP_007285820.1| - 0.052 12.5 4.6 0.074 12.0 4.6 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily PHO4 PF01384.20 gi|433640062|ref|YP_007285822.1| - 3e-42 144.9 35.5 4.2e-42 144.4 35.5 1.2 1 0 0 1 1 1 1 Phosphate transporter family CEP209_CC5 PF16574.5 gi|433640063|ref|YP_007285823.1| - 0.074 13.2 3.8 0.31 11.2 0.6 2.3 2 0 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 Tape_meas_lam_C PF09718.10 gi|433640063|ref|YP_007285823.1| - 0.089 12.9 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF3150 PF11348.8 gi|433640063|ref|YP_007285823.1| - 0.16 11.1 4.2 1.6 7.9 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3150) UPRTase PF14681.6 gi|433640064|ref|YP_007285824.1| - 1.2e-44 152.2 0.0 1.4e-44 152.0 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|433640064|ref|YP_007285824.1| - 1.7e-09 37.4 0.1 2.3e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DUF2892 PF11127.8 gi|433640065|ref|YP_007285825.1| - 1.1e-16 60.6 0.9 1.2e-16 60.5 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Herpes_LMP2 PF07415.11 gi|433640065|ref|YP_007285825.1| - 0.035 12.9 0.6 0.036 12.9 0.6 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Peptidase_S9 PF00326.21 gi|433640066|ref|YP_007285826.1| - 1e-52 178.7 0.4 1.4e-52 178.2 0.4 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PD40 PF07676.12 gi|433640066|ref|YP_007285826.1| - 5.4e-16 58.1 4.0 8.3e-08 32.0 0.1 4.4 4 0 0 4 4 4 3 WD40-like Beta Propeller Repeat Peptidase_S9_N PF02897.15 gi|433640066|ref|YP_007285826.1| - 5.1e-07 28.8 0.0 0.15 10.8 0.0 3.9 3 1 0 3 3 3 2 Prolyl oligopeptidase, N-terminal beta-propeller domain Abhydrolase_1 PF00561.20 gi|433640066|ref|YP_007285826.1| - 4.1e-06 26.6 0.3 0.00046 19.9 0.4 2.3 1 1 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|433640066|ref|YP_007285826.1| - 5.5e-06 25.8 0.3 0.021 14.1 0.1 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DPPIV_N PF00930.21 gi|433640066|ref|YP_007285826.1| - 3.5e-05 22.7 0.0 0.082 11.7 0.0 4.1 2 1 1 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Gmad1 PF10647.9 gi|433640066|ref|YP_007285826.1| - 0.0001 22.2 9.9 0.0026 17.6 0.5 4.1 3 1 1 4 4 4 2 Lipoprotein LpqB beta-propeller domain DLH PF01738.18 gi|433640066|ref|YP_007285826.1| - 0.00014 21.5 0.0 0.00029 20.5 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family AXE1 PF05448.12 gi|433640066|ref|YP_007285826.1| - 0.00028 19.7 1.3 0.14 10.8 1.4 3.0 2 1 0 2 2 2 1 Acetyl xylan esterase (AXE1) Abhydrolase_4 PF08386.10 gi|433640066|ref|YP_007285826.1| - 0.02 15.0 0.0 0.088 12.9 0.0 1.9 2 0 0 2 2 2 0 TAP-like protein Peptidase_S28 PF05577.12 gi|433640066|ref|YP_007285826.1| - 0.25 10.1 0.0 0.37 9.5 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 UPF0029 PF01205.19 gi|433640067|ref|YP_007285827.1| - 1.1e-30 106.1 0.0 1.5e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 gi|433640067|ref|YP_007285827.1| - 1.7e-14 53.4 0.4 5.9e-14 51.7 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1949) EFG_C PF00679.24 gi|433640067|ref|YP_007285827.1| - 0.00011 22.2 0.0 0.00019 21.4 0.0 1.4 1 0 0 1 1 1 1 Elongation factor G C-terminus Nif11 PF07862.11 gi|433640067|ref|YP_007285827.1| - 0.11 12.8 0.2 7.3 7.0 0.0 3.2 3 1 0 3 3 3 0 Nif11 domain ACT PF01842.25 gi|433640068|ref|YP_007285828.1| - 0.00035 20.3 0.4 0.0015 18.2 0.1 2.3 2 1 0 2 2 2 1 ACT domain ACT_7 PF13840.6 gi|433640068|ref|YP_007285828.1| - 0.049 13.4 0.1 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 ACT domain Lar_restr_allev PF14354.6 gi|433640069|ref|YP_007285829.1| - 0.011 16.1 0.1 0.024 15.0 0.1 1.7 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF3123 PF11321.8 gi|433640069|ref|YP_007285829.1| - 1.5 9.5 6.1 0.2 12.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3123) E1-E2_ATPase PF00122.20 gi|433640070|ref|YP_007285830.1| - 3.7e-40 137.4 2.0 3.7e-40 137.4 2.0 2.6 2 1 1 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|433640070|ref|YP_007285830.1| - 3.2e-30 106.0 10.7 1e-29 104.4 9.1 2.4 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|433640070|ref|YP_007285830.1| - 3.9e-09 36.8 0.2 1.9e-08 34.6 0.0 2.4 2 0 0 2 2 2 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|433640070|ref|YP_007285830.1| - 0.0062 16.3 0.1 0.015 15.0 0.2 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|433640070|ref|YP_007285830.1| - 0.019 15.3 0.1 0.052 13.9 0.1 1.7 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase ATPase-cat_bd PF12156.8 gi|433640070|ref|YP_007285830.1| - 0.024 15.4 1.6 0.069 13.9 1.6 1.8 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase Nudix_N_2 PF14803.6 gi|433640070|ref|YP_007285830.1| - 0.039 13.9 3.8 0.11 12.4 3.8 1.8 1 0 0 1 1 1 0 Nudix N-terminal IGPD PF00475.18 gi|433640071|ref|YP_007285831.1| - 1.1e-58 197.6 1.9 1.7e-58 197.0 1.9 1.3 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Lipoprotein_15 PF03640.15 gi|433640071|ref|YP_007285831.1| - 0.049 13.2 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 Secreted repeat of unknown function His_biosynth PF00977.21 gi|433640073|ref|YP_007285833.1| - 3.9e-75 252.2 4.1 4.4e-75 252.1 4.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|433640073|ref|YP_007285833.1| - 1.7e-12 47.1 0.1 1.5e-07 30.8 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|433640073|ref|YP_007285833.1| - 5.9e-09 35.6 2.0 5.5e-06 25.8 0.3 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase ThiG PF05690.14 gi|433640073|ref|YP_007285833.1| - 6.6e-08 32.2 7.9 1.6e-05 24.4 0.8 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.20 gi|433640073|ref|YP_007285833.1| - 9e-07 28.0 3.3 0.0079 15.1 0.2 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain NMO PF03060.15 gi|433640073|ref|YP_007285833.1| - 2.7e-05 23.7 14.8 0.0032 16.9 6.0 2.2 1 1 1 2 2 2 2 Nitronate monooxygenase IGPS PF00218.21 gi|433640073|ref|YP_007285833.1| - 0.00023 20.4 1.3 0.028 13.6 0.1 2.9 2 2 2 4 4 4 1 Indole-3-glycerol phosphate synthase G3P_antiterm PF04309.12 gi|433640073|ref|YP_007285833.1| - 0.00041 19.8 2.2 0.027 13.9 0.2 2.3 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator TMP-TENI PF02581.17 gi|433640073|ref|YP_007285833.1| - 0.00042 19.7 4.0 0.025 13.9 0.6 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase NanE PF04131.14 gi|433640073|ref|YP_007285833.1| - 0.00054 19.2 3.7 0.091 11.9 0.3 2.8 2 1 0 3 3 3 2 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 gi|433640073|ref|YP_007285833.1| - 0.023 13.7 8.4 0.063 12.3 5.8 2.5 1 1 1 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|433640073|ref|YP_007285833.1| - 0.028 13.4 12.3 0.37 9.8 3.3 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase B12-binding PF02310.19 gi|433640073|ref|YP_007285833.1| - 0.038 14.0 5.0 0.41 10.7 0.1 3.0 2 1 1 3 3 3 0 B12 binding domain Ribul_P_3_epim PF00834.19 gi|433640073|ref|YP_007285833.1| - 0.31 10.4 3.1 1.6 8.1 0.1 2.5 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family HTH_20 PF12840.7 gi|433640074|ref|YP_007285834.1| - 0.0014 18.6 0.1 0.0072 16.4 0.1 2.2 1 1 0 1 1 1 1 Helix-turn-helix domain HypA PF01155.19 gi|433640074|ref|YP_007285834.1| - 0.0022 18.0 0.4 0.044 13.8 0.0 2.3 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Elf1 PF05129.13 gi|433640074|ref|YP_007285834.1| - 0.058 13.4 1.6 0.23 11.5 0.1 2.3 2 1 0 2 2 2 0 Transcription elongation factor Elf1 like Chordopox_A33R PF05966.12 gi|433640074|ref|YP_007285834.1| - 0.078 12.3 0.0 0.37 10.0 0.0 1.8 2 0 0 2 2 2 0 Chordopoxvirus A33R protein C1_1 PF00130.22 gi|433640074|ref|YP_007285834.1| - 0.1 12.5 2.9 2.1 8.3 0.1 3.0 3 0 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.7 gi|433640074|ref|YP_007285834.1| - 0.28 11.3 4.3 8.5 6.5 1.0 2.5 2 0 0 2 2 2 0 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|433640074|ref|YP_007285834.1| - 0.28 11.2 6.3 0.98 9.5 0.4 2.7 2 1 0 2 2 2 0 zinc-ribbons Cys_rich_CPXG PF14255.6 gi|433640074|ref|YP_007285834.1| - 2.2 8.3 5.8 28 4.7 0.2 2.9 2 0 0 2 2 2 0 Cysteine-rich CPXCG ZZ PF00569.17 gi|433640074|ref|YP_007285834.1| - 7.5 6.5 8.4 43 4.0 0.2 3.0 2 1 0 2 2 2 0 Zinc finger, ZZ type Adenylsucc_synt PF00709.21 gi|433640075|ref|YP_007285835.1| - 4.4e-149 497.0 0.0 5.1e-149 496.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase CitMHS PF03600.16 gi|433640076|ref|YP_007285836.1| - 1.5e-51 175.4 41.9 1.4e-35 123.0 11.5 2.5 2 1 1 3 3 3 2 Citrate transporter Na_sulph_symp PF00939.19 gi|433640076|ref|YP_007285836.1| - 3.5e-22 79.1 30.1 2.3e-12 46.7 10.4 3.1 2 1 1 3 3 3 3 Sodium:sulfate symporter transmembrane region TrkA_C PF02080.21 gi|433640076|ref|YP_007285836.1| - 7.1e-14 51.4 2.9 4.6e-08 32.8 0.1 2.5 2 0 0 2 2 2 2 TrkA-C domain PHO4 PF01384.20 gi|433640077|ref|YP_007285837.1| - 2.2e-35 122.3 41.4 1.7e-34 119.4 35.8 2.7 1 1 1 2 2 2 2 Phosphate transporter family Usp PF00582.26 gi|433640078|ref|YP_007285838.1| - 1.6e-23 83.8 2.8 1.7e-23 83.7 2.8 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF2884 PF11101.8 gi|433640079|ref|YP_007285839.1| - 6.2e-06 25.9 19.9 0.017 14.6 11.2 2.9 1 1 1 2 2 2 2 Protein of unknown function (DUF2884) DUF445 PF04286.12 gi|433640079|ref|YP_007285839.1| - 1e-05 25.5 18.8 2.9e-05 24.1 12.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF445) Cornifin PF02389.15 gi|433640079|ref|YP_007285839.1| - 0.0012 19.1 6.2 0.0014 18.8 5.4 1.4 1 1 0 1 1 1 1 Cornifin (SPRR) family YpjP PF14005.6 gi|433640079|ref|YP_007285839.1| - 0.0015 18.6 23.0 0.48 10.5 6.5 3.5 1 1 2 3 3 3 3 YpjP-like protein EcsC PF12787.7 gi|433640079|ref|YP_007285839.1| - 0.0024 17.6 7.0 16 5.0 7.1 3.2 1 1 0 1 1 1 0 EcsC protein family GerPC PF10737.9 gi|433640079|ref|YP_007285839.1| - 0.0047 17.0 10.7 0.014 15.5 1.8 2.2 1 1 1 2 2 2 1 Spore germination protein GerPC DUF5314 PF17241.2 gi|433640079|ref|YP_007285839.1| - 0.0057 16.4 9.1 6.6 6.4 0.1 3.9 1 1 1 2 2 2 1 Family of unknown function (DUF5314) BAR PF03114.18 gi|433640079|ref|YP_007285839.1| - 0.0087 15.7 10.3 0.015 14.9 4.3 2.1 1 1 1 2 2 2 1 BAR domain COMPASS-Shg1 PF05205.12 gi|433640079|ref|YP_007285839.1| - 0.011 16.4 17.6 0.95 10.2 8.2 3.3 1 1 2 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 MT0933_antitox PF14013.6 gi|433640079|ref|YP_007285839.1| - 0.023 15.0 18.2 1.8e+04 -6.2 18.2 5.6 1 1 0 1 1 0 0 MT0933-like antitoxin protein PIN_8 PF18476.1 gi|433640079|ref|YP_007285839.1| - 0.037 13.9 16.6 1.1 9.1 8.3 2.9 1 1 1 2 2 2 0 PIN like domain PGDH_C PF16896.5 gi|433640079|ref|YP_007285839.1| - 0.09 12.7 22.7 32 4.4 0.4 4.3 1 1 1 2 2 1 0 Phosphogluconate dehydrogenase (decarboxylating) C-term HARE-HTH PF05066.13 gi|433640079|ref|YP_007285839.1| - 0.33 11.4 9.7 6.6 7.2 0.4 4.2 1 1 3 4 4 4 0 HB1, ASXL, restriction endonuclease HTH domain ARGLU PF15346.6 gi|433640079|ref|YP_007285839.1| - 0.86 9.5 48.9 0.12 12.3 1.4 4.3 1 1 1 2 2 1 0 Arginine and glutamate-rich 1 DUF3819 PF12842.7 gi|433640079|ref|YP_007285839.1| - 1.7 8.6 10.7 1.8e+02 2.0 10.7 3.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3819) SLY PF12485.8 gi|433640079|ref|YP_007285839.1| - 1.7 9.3 15.7 4.1 8.1 5.5 2.6 1 1 1 2 2 2 0 Lymphocyte signaling adaptor protein MlrC_C PF07171.12 gi|433640079|ref|YP_007285839.1| - 1.9 8.7 21.0 8.3 6.5 2.8 3.4 1 1 2 3 3 3 0 MlrC C-terminus SecD_SecF PF02355.16 gi|433640079|ref|YP_007285839.1| - 2 7.7 13.3 7.8 5.8 0.6 4.2 1 1 2 3 3 3 0 Protein export membrane protein CEL_III_C PF18054.1 gi|433640079|ref|YP_007285839.1| - 3.3 7.8 21.3 5.1 7.2 8.2 2.4 1 1 1 2 2 2 0 CEL-III C-terminal Dynein_light PF01221.18 gi|433640079|ref|YP_007285839.1| - 3.8 7.9 13.1 7.8e+03 -2.7 13.1 3.8 1 1 0 1 1 1 0 Dynein light chain type 1 DUF2497 PF10691.9 gi|433640079|ref|YP_007285839.1| - 4.4 7.8 16.8 4.3 7.8 1.6 3.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2497) Entericidin PF08085.11 gi|433640079|ref|YP_007285839.1| - 4.4 7.5 13.1 1.6e+02 2.5 0.0 7.4 8 3 2 10 10 10 0 Entericidin EcnA/B family AKAP95 PF04988.12 gi|433640079|ref|YP_007285839.1| - 8.7 6.5 9.4 5 7.3 1.3 2.2 1 1 1 2 2 2 0 A-kinase anchoring protein 95 (AKAP95) PHO4 PF01384.20 gi|433640080|ref|YP_007285840.1| - 1.9e-38 132.4 31.7 3.2e-38 131.6 30.8 1.8 1 1 1 2 2 2 1 Phosphate transporter family Fer2 PF00111.27 gi|433640081|ref|YP_007285841.1| - 1.9e-14 53.4 0.6 3e-14 52.7 0.6 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|433640081|ref|YP_007285841.1| - 0.032 14.3 0.1 0.058 13.4 0.1 1.6 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Peptidase_A24 PF01478.18 gi|433640082|ref|YP_007285842.1| - 1.2e-09 38.5 3.0 5.6e-06 26.7 11.0 2.2 1 1 1 2 2 2 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 gi|433640082|ref|YP_007285842.1| - 3.1e-06 27.6 0.0 1.5e-05 25.4 0.0 2.0 2 0 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II SPC12 PF06645.13 gi|433640083|ref|YP_007285843.1| - 0.03 14.4 0.3 0.044 13.9 0.3 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) VIT1 PF01988.19 gi|433640083|ref|YP_007285843.1| - 0.4 10.5 9.0 0.44 10.4 9.0 1.1 1 0 0 1 1 1 0 VIT family LapA_dom PF06305.11 gi|433640083|ref|YP_007285843.1| - 7.4 6.5 7.5 20 5.1 0.5 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Aldedh PF00171.22 gi|433640084|ref|YP_007285844.1| - 3.6e-171 569.8 0.0 4e-171 569.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PAP2 PF01569.21 gi|433640085|ref|YP_007285845.1| - 9.4e-15 54.6 3.5 9.4e-15 54.6 3.5 2.1 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|433640085|ref|YP_007285845.1| - 6.6e-07 29.2 10.5 6.6e-07 29.2 10.5 1.8 2 1 0 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 gi|433640085|ref|YP_007285845.1| - 0.00071 20.1 2.0 0.0018 18.8 2.0 1.6 1 0 0 1 1 1 1 PAP2 superfamily C-terminal CYYR1 PF10873.8 gi|433640085|ref|YP_007285845.1| - 0.19 12.2 1.1 0.25 11.8 0.4 1.5 2 0 0 2 2 2 0 Cysteine and tyrosine-rich protein 1 SKG6 PF08693.10 gi|433640085|ref|YP_007285845.1| - 0.6 9.6 0.0 0.6 9.6 0.0 3.5 4 0 0 4 4 4 0 Transmembrane alpha-helix domain PMT_2 PF13231.6 gi|433640085|ref|YP_007285845.1| - 4 7.6 12.5 0.3 11.3 6.8 2.0 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase HIT PF01230.23 gi|433640086|ref|YP_007285846.1| - 8e-27 93.9 0.0 9.7e-27 93.6 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|433640086|ref|YP_007285846.1| - 1e-13 51.7 0.0 1.3e-13 51.4 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|433640086|ref|YP_007285846.1| - 0.0063 16.4 0.0 0.0093 15.8 0.0 1.2 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 GalP_UDP_tr_C PF02744.17 gi|433640086|ref|YP_007285846.1| - 0.18 11.5 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain PQQ_2 PF13360.6 gi|433640087|ref|YP_007285847.1| - 9.1e-27 94.2 11.3 3.2e-20 72.7 5.1 3.6 1 1 0 2 2 2 2 PQQ-like domain PQQ PF01011.21 gi|433640087|ref|YP_007285847.1| - 4e-15 54.9 10.2 0.0025 17.7 0.2 6.4 6 0 0 6 6 6 5 PQQ enzyme repeat PQQ_3 PF13570.6 gi|433640087|ref|YP_007285847.1| - 3.6e-11 43.2 34.0 0.039 14.5 0.5 8.6 7 2 1 8 8 8 6 PQQ-like domain UDG PF03167.19 gi|433640088|ref|YP_007285848.1| - 5.4e-24 84.9 0.0 8.1e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF4157 PF13699.6 gi|433640089|ref|YP_007285849.1| - 5e-31 106.8 2.2 8.8e-30 102.8 0.4 2.8 3 0 0 3 3 3 1 Domain of unknown function (DUF4157) Peptidase_M91 PF14891.6 gi|433640089|ref|YP_007285849.1| - 0.096 13.0 3.7 0.1 12.9 0.3 2.7 2 1 1 3 3 3 0 Effector protein TraT PF05818.12 gi|433640091|ref|YP_007285851.1| - 0.22 11.2 0.7 0.36 10.5 0.5 1.4 2 0 0 2 2 2 0 Enterobacterial TraT complement resistance protein Gly-zipper_Omp PF13488.6 gi|433640091|ref|YP_007285851.1| - 0.24 11.4 9.0 0.37 10.8 9.0 1.3 1 0 0 1 1 1 0 Glycine zipper YtxH PF12732.7 gi|433640091|ref|YP_007285851.1| - 3.4 8.3 5.0 1.3 9.6 0.2 2.5 3 0 0 3 3 3 0 YtxH-like protein Bacteriocin_IIc PF10439.9 gi|433640091|ref|YP_007285851.1| - 5.2 7.3 9.1 3.3 7.9 5.7 2.1 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide DUF973 PF06157.11 gi|433640093|ref|YP_007285853.1| - 0.12 11.5 2.6 0.13 11.3 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) tRNA-synt_1 PF00133.22 gi|433640094|ref|YP_007285854.1| - 1.3e-172 575.2 0.3 1.7e-172 574.9 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|433640094|ref|YP_007285854.1| - 1.2e-28 99.9 0.0 2.3e-28 99.1 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|433640094|ref|YP_007285854.1| - 1.9e-26 92.8 2.3 2.8e-11 42.8 0.0 3.9 4 1 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|433640094|ref|YP_007285854.1| - 0.0026 17.3 0.0 0.0073 15.8 0.0 1.7 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|433640094|ref|YP_007285854.1| - 0.019 14.3 0.0 6.1 6.1 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain HTH_20 PF12840.7 gi|433640095|ref|YP_007285855.1| - 0.0043 17.1 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Elf1 PF05129.13 gi|433640095|ref|YP_007285855.1| - 0.0096 15.9 1.7 3 8.0 0.1 2.8 1 1 1 2 2 2 2 Transcription elongation factor Elf1 like zf-Sec23_Sec24 PF04810.15 gi|433640095|ref|YP_007285855.1| - 0.028 14.5 0.8 7.7 6.7 0.1 2.8 3 0 0 3 3 3 0 Sec23/Sec24 zinc finger zf-Mss51 PF13824.6 gi|433640095|ref|YP_007285855.1| - 0.038 14.1 0.6 0.038 14.1 0.6 2.5 3 0 0 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 Lar_restr_allev PF14354.6 gi|433640095|ref|YP_007285855.1| - 0.1 13.0 2.6 1.7 9.0 0.2 2.4 2 0 0 2 2 2 0 Restriction alleviation protein Lar Prok-RING_4 PF14447.6 gi|433640095|ref|YP_007285855.1| - 0.13 12.2 0.7 11 6.0 0.0 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Zn_Tnp_IS1595 PF12760.7 gi|433640095|ref|YP_007285855.1| - 0.15 12.1 7.5 0.38 10.8 0.1 2.8 2 1 1 3 3 3 0 Transposase zinc-ribbon domain TackOD1 PF18551.1 gi|433640095|ref|YP_007285855.1| - 0.16 11.6 0.4 6 6.5 0.1 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 Cys_rich_CPXG PF14255.6 gi|433640095|ref|YP_007285855.1| - 1 9.3 5.4 1.8 8.5 0.5 3.1 2 1 0 2 2 2 0 Cysteine-rich CPXCG DZR PF12773.7 gi|433640095|ref|YP_007285855.1| - 1.4 9.0 4.7 6.8 6.8 0.2 2.6 2 1 0 2 2 2 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 gi|433640095|ref|YP_007285855.1| - 5.3 7.0 7.1 2.6 8.0 1.5 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Nudix_N_2 PF14803.6 gi|433640095|ref|YP_007285855.1| - 5.6 7.0 8.9 7.5 6.6 0.8 3.5 2 2 0 2 2 2 0 Nudix N-terminal Ribosomal_S27e PF01667.17 gi|433640095|ref|YP_007285855.1| - 7.6 6.3 6.1 23 4.8 0.3 2.8 3 0 0 3 3 3 0 Ribosomal protein S27 Acetyltransf_3 PF13302.7 gi|433640096|ref|YP_007285856.1| - 2.9e-22 79.8 0.0 3.5e-22 79.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433640096|ref|YP_007285856.1| - 3.2e-14 53.2 0.0 5.7e-14 52.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|433640096|ref|YP_007285856.1| - 5.7e-08 33.0 0.0 1.2e-07 32.0 0.0 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|433640096|ref|YP_007285856.1| - 7e-05 22.5 0.0 0.00027 20.6 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433640096|ref|YP_007285856.1| - 9e-05 22.4 0.0 0.0002 21.3 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 gi|433640096|ref|YP_007285856.1| - 0.0033 17.8 0.0 0.0069 16.8 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433640096|ref|YP_007285856.1| - 0.0067 16.4 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|433640096|ref|YP_007285856.1| - 0.086 12.4 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase HAD_2 PF13419.6 gi|433640097|ref|YP_007285857.1| - 3.7e-23 82.5 0.0 6.1e-23 81.8 0.0 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|433640097|ref|YP_007285857.1| - 2.9e-13 50.6 1.3 4.3e-13 50.0 1.3 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|433640097|ref|YP_007285857.1| - 5.1e-11 42.5 0.1 2.1e-10 40.5 0.0 2.0 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|433640097|ref|YP_007285857.1| - 4.9e-08 33.6 1.5 5.9e-08 33.3 1.5 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF2207 PF09972.9 gi|433640098|ref|YP_007285858.1| - 0.019 13.8 0.0 0.028 13.2 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ASH PF15780.5 gi|433640098|ref|YP_007285858.1| - 0.081 13.1 0.1 8.5 6.7 0.0 2.6 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Fn3-like PF14310.6 gi|433640098|ref|YP_007285858.1| - 0.097 12.8 3.7 2.4 8.3 0.0 3.4 3 1 0 3 3 3 0 Fibronectin type III-like domain fn3_5 PF06280.12 gi|433640098|ref|YP_007285858.1| - 0.61 10.8 3.6 5.6 7.7 0.3 2.5 1 1 1 2 2 2 0 Fn3-like domain Cadherin-like PF12733.7 gi|433640098|ref|YP_007285858.1| - 0.79 10.3 11.4 0.79 10.3 4.8 3.4 2 1 2 4 4 4 0 Cadherin-like beta sandwich domain Flagellin_D3 PF08884.11 gi|433640098|ref|YP_007285858.1| - 5.8 7.4 8.4 0.86 10.0 3.2 2.4 2 0 0 2 2 2 0 Flagellin D3 domain Pribosyltran_N PF13793.6 gi|433640099|ref|YP_007285859.1| - 5.1e-21 74.8 0.0 2e-19 69.6 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|433640099|ref|YP_007285859.1| - 1.4e-10 40.9 1.3 7.4e-10 38.6 0.3 2.2 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|433640099|ref|YP_007285859.1| - 5e-06 26.7 0.2 9.7e-06 25.7 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|433640099|ref|YP_007285859.1| - 4e-05 23.2 0.1 8.1e-05 22.1 0.0 1.5 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|433640099|ref|YP_007285859.1| - 0.049 13.1 0.2 0.21 11.0 0.3 1.9 1 1 1 2 2 2 0 Phosphoribosyl transferase DHDPS PF00701.22 gi|433640099|ref|YP_007285859.1| - 0.093 11.4 0.0 0.15 10.7 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family DUF1842 PF08896.10 gi|433640100|ref|YP_007285860.1| - 0.09 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) UCR_Fe-S_N PF10399.9 gi|433640100|ref|YP_007285860.1| - 0.21 11.0 1.4 0.37 10.2 1.4 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 gi|433640100|ref|YP_007285860.1| - 0.95 9.4 6.3 1.7 8.6 6.3 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PGM_PMM_I PF02878.16 gi|433640102|ref|YP_007285862.1| - 1.7e-34 118.5 0.0 3.5e-34 117.5 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|433640102|ref|YP_007285862.1| - 1.3e-29 102.9 1.5 4.2e-29 101.2 0.3 2.4 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|433640102|ref|YP_007285862.1| - 2.4e-15 56.7 0.0 4.5e-15 55.8 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|433640102|ref|YP_007285862.1| - 3.8e-14 52.6 0.2 1.2e-13 51.0 0.2 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CinA_KH PF18146.1 gi|433640102|ref|YP_007285862.1| - 0.11 12.7 2.2 0.37 11.0 0.1 2.7 3 0 0 3 3 3 0 Damage-inducible protein CinA KH domain HPP PF04982.13 gi|433640103|ref|YP_007285863.1| - 5.5e-15 55.6 8.9 9.8e-15 54.8 8.9 1.4 1 0 0 1 1 1 1 HPP family Usp PF00582.26 gi|433640104|ref|YP_007285864.1| - 5.2e-27 95.1 3.7 6.8e-27 94.7 3.7 1.2 1 0 0 1 1 1 1 Universal stress protein family Exonuc_VII_S PF02609.16 gi|433640105|ref|YP_007285865.1| - 0.017 15.1 0.2 0.06 13.4 0.2 2.0 1 0 0 1 1 1 0 Exonuclease VII small subunit PRA-CH PF01502.18 gi|433640106|ref|YP_007285866.1| - 3.7e-34 116.4 0.1 4.8e-34 116.0 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase APH PF01636.23 gi|433640108|ref|YP_007285868.1| - 8.7e-14 52.0 5.5 1.4e-13 51.4 5.5 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 gi|433640108|ref|YP_007285868.1| - 0.066 12.4 0.0 0.22 10.7 0.0 1.9 2 0 0 2 2 2 0 Fructosamine kinase EloA-BP1 PF15870.5 gi|433640108|ref|YP_007285868.1| - 0.14 12.4 0.0 1.3 9.3 0.0 2.0 2 0 0 2 2 2 0 ElonginA binding-protein 1 Auto_anti-p27 PF06677.12 gi|433640109|ref|YP_007285869.1| - 2.4e-14 53.2 0.6 3.4e-14 52.7 0.6 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 gi|433640109|ref|YP_007285869.1| - 0.016 15.2 1.2 0.016 15.2 1.2 1.6 2 0 0 2 2 2 0 Double zinc ribbon Prok-RING_1 PF14446.6 gi|433640109|ref|YP_007285869.1| - 0.061 13.3 1.3 0.11 12.5 0.6 1.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zinc_ribbon_2 PF13240.6 gi|433640109|ref|YP_007285869.1| - 0.4 10.5 4.6 0.79 9.5 4.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|433640109|ref|YP_007285869.1| - 0.6 9.6 3.9 1.5 8.3 3.9 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Acetyltransf_7 PF13508.7 gi|433640110|ref|YP_007285870.1| - 6.2e-12 45.8 0.0 7.9e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|433640110|ref|YP_007285870.1| - 1.3e-11 44.5 0.0 1.8e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|433640110|ref|YP_007285870.1| - 1e-10 41.8 0.0 1.2e-10 41.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|433640110|ref|YP_007285870.1| - 0.00013 22.0 0.0 0.00018 21.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|433640110|ref|YP_007285870.1| - 0.00014 21.8 0.0 0.00033 20.6 0.0 1.6 1 1 0 1 1 1 1 FR47-like protein LDcluster4 PF18306.1 gi|433640111|ref|YP_007285871.1| - 8.4e-37 126.2 1.8 9.6e-37 126.0 1.8 1.0 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|433640111|ref|YP_007285871.1| - 7.3e-06 26.1 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Possible lysine decarboxylase DNA_processg_A PF02481.15 gi|433640111|ref|YP_007285871.1| - 0.00017 20.9 2.1 0.00049 19.4 1.4 1.8 1 1 1 2 2 2 1 DNA recombination-mediator protein A Ldh_1_N PF00056.23 gi|433640112|ref|YP_007285872.1| - 2.9e-37 127.9 0.5 4.2e-37 127.4 0.5 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|433640112|ref|YP_007285872.1| - 6.4e-29 101.0 0.0 1.2e-28 100.2 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Fer4_15 PF13459.6 gi|433640113|ref|YP_007285873.1| - 2.7e-21 76.1 4.4 3.2e-21 75.8 4.4 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|433640113|ref|YP_007285873.1| - 2.4e-07 31.2 1.4 5.3e-07 30.1 1.4 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 gi|433640113|ref|YP_007285873.1| - 0.0085 16.1 2.1 0.23 11.6 0.1 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.27 gi|433640113|ref|YP_007285873.1| - 0.0088 15.8 3.3 0.52 10.2 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|433640113|ref|YP_007285873.1| - 0.022 15.3 0.4 3.6 8.3 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Methyltransf_25 PF13649.6 gi|433640114|ref|YP_007285874.1| - 7.1e-13 49.1 0.2 1.3e-12 48.3 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|433640114|ref|YP_007285874.1| - 7.3e-11 42.6 0.3 1.2e-10 41.9 0.3 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|433640114|ref|YP_007285874.1| - 4.3e-10 39.6 0.0 5.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|433640114|ref|YP_007285874.1| - 1.9e-07 31.1 0.0 2.5e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|433640114|ref|YP_007285874.1| - 2.3e-07 30.6 0.1 3e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|433640114|ref|YP_007285874.1| - 1e-05 26.2 0.0 1.9e-05 25.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|433640114|ref|YP_007285874.1| - 0.00061 19.5 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) CMAS PF02353.20 gi|433640114|ref|YP_007285874.1| - 0.0013 18.1 0.3 0.0029 17.0 0.1 1.6 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|433640114|ref|YP_007285874.1| - 0.016 14.8 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_9 PF08003.11 gi|433640114|ref|YP_007285874.1| - 0.095 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_29 PF03141.16 gi|433640114|ref|YP_007285874.1| - 0.25 9.9 0.0 0.3 9.6 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Pox_MCEL PF03291.16 gi|433640114|ref|YP_007285874.1| - 0.31 10.1 0.0 0.4 9.7 0.0 1.1 1 0 0 1 1 1 0 mRNA capping enzyme PHO4 PF01384.20 gi|433640115|ref|YP_007285875.1| - 1.1e-37 129.9 29.0 1.5e-37 129.5 29.0 1.2 1 0 0 1 1 1 1 Phosphate transporter family Usp PF00582.26 gi|433640116|ref|YP_007285876.1| - 3.6e-12 47.0 1.8 4e-12 46.8 1.8 1.0 1 0 0 1 1 1 1 Universal stress protein family DEAD PF00270.29 gi|433640117|ref|YP_007285877.1| - 2.1e-22 79.7 0.0 3.7e-22 78.9 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|433640117|ref|YP_007285877.1| - 5.6e-08 33.0 0.0 1e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|433640117|ref|YP_007285877.1| - 6.9e-06 26.6 0.2 2.9e-05 24.6 0.2 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix domain Helicase_C PF00271.31 gi|433640117|ref|YP_007285877.1| - 8.4e-06 26.1 0.0 6.3e-05 23.3 0.0 2.4 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DNA_pol_lambd_f PF10391.9 gi|433640117|ref|YP_007285877.1| - 3.4e-05 23.6 0.1 0.00011 21.9 0.1 1.9 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|433640117|ref|YP_007285877.1| - 0.006 16.4 0.0 0.42 10.6 0.0 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif TraD PF06412.11 gi|433640117|ref|YP_007285877.1| - 0.065 13.1 0.5 0.22 11.4 0.5 1.9 1 0 0 1 1 1 0 Conjugal transfer protein TraD DUF732 PF05305.14 gi|433640117|ref|YP_007285877.1| - 0.16 12.4 1.7 0.41 11.1 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF732) CGI-121 PF08617.10 gi|433640118|ref|YP_007285878.1| - 2e-08 34.5 0.0 2.6e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 MDMPI_C PF07398.11 gi|433640118|ref|YP_007285878.1| - 0.069 14.0 1.0 0.069 14.0 1.0 2.0 1 1 1 2 2 2 0 MDMPI C-terminal domain Bac_luciferase PF00296.20 gi|433640119|ref|YP_007285879.1| - 1.6e-37 129.6 2.4 1.9e-37 129.4 2.4 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase HNH_repeat PF18780.1 gi|433640121|ref|YP_007285881.1| - 0.083 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Homing endonuclease repeat TMEM215 PF15746.5 gi|433640121|ref|YP_007285881.1| - 0.37 10.2 3.6 4.8 6.6 0.5 2.2 2 0 0 2 2 2 0 TMEM215 family HNH PF01844.23 gi|433640121|ref|YP_007285881.1| - 1.9 8.8 24.2 13 6.1 8.7 3.6 2 2 0 2 2 2 0 HNH endonuclease IMP_cyclohyd PF07826.11 gi|433640122|ref|YP_007285882.1| - 4.6e-63 212.3 0.0 5.3e-63 212.1 0.0 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein Metallophos_2 PF12850.7 gi|433640123|ref|YP_007285883.1| - 8.4e-31 107.4 0.2 1e-30 107.1 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|433640123|ref|YP_007285883.1| - 4.5e-11 43.6 1.9 4.9e-10 40.2 1.9 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|433640123|ref|YP_007285883.1| - 0.0015 18.0 0.1 0.029 13.7 0.0 2.1 2 0 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily DUF3185 PF11381.8 gi|433640124|ref|YP_007285884.1| - 0.032 14.2 0.2 0.24 11.4 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3185) AA_kinase PF00696.28 gi|433640126|ref|YP_007285886.1| - 3.5e-44 151.2 2.9 5.1e-44 150.7 2.9 1.3 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.6 gi|433640126|ref|YP_007285886.1| - 2.7e-10 39.9 0.0 0.00062 19.5 0.0 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|433640126|ref|YP_007285886.1| - 1.7e-05 24.5 0.3 0.15 11.9 0.1 2.9 2 0 0 2 2 2 2 ACT domain DNAPolymera_Pol PF11590.8 gi|433640127|ref|YP_007285887.1| - 0.093 12.6 0.7 0.26 11.2 0.2 1.9 2 0 0 2 2 2 0 DNA polymerase catalytic subunit Pol # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halovivax_ruber_XH_70_uid184819/NC_019964.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halovivax_ruber_XH_70_uid184819/NC_019964.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halovivax_ruber_XH_70_uid184819/NC_019964.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halovivax_ruber_XH_70_uid184819/NC_019964.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 15:56:35 2019 # [ok]