#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|284176393|ref|YP_003406668.1|	113	TrmB	Sugar-specific	22.0	0.0	3.1e-08	0.00011	13	63	32	83	18	88	0.84
gi|284176393|ref|YP_003406668.1|	113	HTH_20	Helix-turn-helix	14.8	0.0	6e-06	0.022	19	57	33	74	23	76	0.85
gi|284176393|ref|YP_003406668.1|	113	HTH_Crp_2	Crp-like	13.2	0.0	1.9e-05	0.067	21	45	41	65	18	81	0.79
gi|284176393|ref|YP_003406668.1|	113	HTH_Crp_2	Crp-like	-1.0	0.0	0.49	1.8e+03	38	47	90	99	86	101	0.79
gi|284176393|ref|YP_003406668.1|	113	Rrf2	Transcriptional	13.3	0.0	2.2e-05	0.077	7	61	26	77	19	84	0.87
gi|284176393|ref|YP_003406668.1|	113	MarR_2	MarR	11.4	0.0	6.1e-05	0.22	11	56	30	76	25	82	0.85
gi|284176393|ref|YP_003406668.1|	113	MarR_2	MarR	-1.4	0.0	0.61	2.2e+03	35	46	87	98	86	100	0.72
gi|284176396|ref|YP_003406671.1|	171	HSBP1	Heat	14.2	0.1	1.5e-05	0.03	24	43	36	55	31	60	0.88
gi|284176396|ref|YP_003406671.1|	171	IFT46_B_C	Intraflagellar	14.6	0.2	1.1e-05	0.021	108	159	5	57	1	84	0.85
gi|284176396|ref|YP_003406671.1|	171	RHH_1	Ribbon-helix-helix	13.7	2.6	2.2e-05	0.044	10	36	1	27	1	29	0.94
gi|284176396|ref|YP_003406671.1|	171	RHH_1	Ribbon-helix-helix	0.3	0.7	0.38	7.6e+02	9	19	43	53	42	55	0.81
gi|284176396|ref|YP_003406671.1|	171	RHH_1	Ribbon-helix-helix	-2.0	0.0	2	4e+03	28	35	146	153	145	156	0.78
gi|284176396|ref|YP_003406671.1|	171	T3SS_HrpK1	Type	1.4	0.0	0.11	2.1e+02	44	80	4	40	2	53	0.86
gi|284176396|ref|YP_003406671.1|	171	T3SS_HrpK1	Type	9.4	0.0	0.00037	0.75	14	64	93	143	88	156	0.79
gi|284176396|ref|YP_003406671.1|	171	PhoU	PhoU	12.3	0.8	9e-05	0.18	22	51	33	62	15	94	0.80
gi|284176396|ref|YP_003406671.1|	171	BLOC1_2	Biogenesis	12.2	0.4	8.5e-05	0.17	42	80	16	54	3	57	0.83
gi|284176396|ref|YP_003406671.1|	171	BBP1_C	Spindle	11.9	2.7	7.6e-05	0.15	120	175	24	77	3	83	0.67
gi|284176396|ref|YP_003406671.1|	171	DUF2802	Protein	-0.5	0.1	0.7	1.4e+03	18	34	22	38	5	39	0.68
gi|284176396|ref|YP_003406671.1|	171	DUF2802	Protein	7.4	0.1	0.0025	4.9	5	31	40	66	37	96	0.85
gi|284176396|ref|YP_003406671.1|	171	DUF2802	Protein	1.4	0.0	0.18	3.6e+02	10	34	102	126	96	127	0.88
gi|284176396|ref|YP_003406671.1|	171	DUF2802	Protein	-2.9	0.0	3.9	7.8e+03	27	38	141	152	132	152	0.73
gi|284176396|ref|YP_003406671.1|	171	PSK_trans_fac	Rv0623-like	7.0	2.2	0.005	9.9	19	72	10	68	3	78	0.73
gi|284176396|ref|YP_003406671.1|	171	PSK_trans_fac	Rv0623-like	7.2	1.0	0.0042	8.4	42	81	91	130	76	131	0.65
gi|284176398|ref|YP_003406673.1|	864	Apolipoprotein	Apolipoprotein	32.8	0.4	5.4e-11	6e-08	67	189	21	143	5	144	0.91
gi|284176398|ref|YP_003406673.1|	864	Apolipoprotein	Apolipoprotein	16.7	0.0	4.4e-06	0.005	48	128	119	226	118	291	0.59
gi|284176398|ref|YP_003406673.1|	864	Phasin	Poly(hydroxyalcanoate)	14.9	6.7	1.8e-05	0.02	39	122	28	107	8	109	0.80
gi|284176398|ref|YP_003406673.1|	864	Phasin	Poly(hydroxyalcanoate)	12.7	1.4	8.4e-05	0.094	25	85	94	154	93	164	0.77
gi|284176398|ref|YP_003406673.1|	864	Phasin	Poly(hydroxyalcanoate)	7.2	0.1	0.0044	4.9	54	95	167	208	163	219	0.88
gi|284176398|ref|YP_003406673.1|	864	DUF883	Bacterial	6.5	0.8	0.011	12	22	69	15	62	4	65	0.62
gi|284176398|ref|YP_003406673.1|	864	DUF883	Bacterial	18.3	1.7	2.4e-06	0.0027	4	71	59	126	56	127	0.93
gi|284176398|ref|YP_003406673.1|	864	DUF883	Bacterial	5.6	0.1	0.022	25	32	67	135	170	127	210	0.46
gi|284176398|ref|YP_003406673.1|	864	DUF883	Bacterial	1.8	0.1	0.33	3.7e+02	60	88	365	392	348	397	0.69
gi|284176398|ref|YP_003406673.1|	864	YtxH	YtxH-like	8.2	12.0	0.0033	3.7	24	74	30	80	7	81	0.74
gi|284176398|ref|YP_003406673.1|	864	YtxH	YtxH-like	9.2	10.4	0.0015	1.7	25	73	64	119	60	134	0.68
gi|284176398|ref|YP_003406673.1|	864	YtxH	YtxH-like	8.2	7.2	0.0031	3.5	24	73	133	189	115	209	0.78
gi|284176398|ref|YP_003406673.1|	864	YtxH	YtxH-like	0.2	0.0	1	1.1e+03	22	48	242	280	231	304	0.66
gi|284176398|ref|YP_003406673.1|	864	ApoLp-III	Apolipophorin-III	16.8	5.3	5e-06	0.0056	42	140	11	106	5	109	0.86
gi|284176398|ref|YP_003406673.1|	864	ApoLp-III	Apolipophorin-III	11.0	2.1	0.0003	0.34	41	141	98	199	96	204	0.65
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	10.9	24.9	0.00039	0.43	3	48	24	72	5	73	0.93
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	9.2	14.2	0.0014	1.5	9	47	45	82	44	84	0.78
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	5.2	7.9	0.024	27	2	49	78	139	71	139	0.82
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	0.8	0.2	0.56	6.3e+02	14	30	138	154	136	161	0.60
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	11.8	5.8	0.00021	0.23	2	32	170	200	169	209	0.93
gi|284176398|ref|YP_003406673.1|	864	MT0933_antitox	MT0933-like	-2.0	0.0	4.2	4.7e+03	22	33	201	212	201	214	0.83
gi|284176398|ref|YP_003406673.1|	864	REF	Rubber	11.2	6.9	0.00021	0.23	27	116	14	103	10	121	0.86
gi|284176398|ref|YP_003406673.1|	864	REF	Rubber	7.7	1.4	0.0025	2.8	43	118	100	171	95	209	0.77
gi|284176398|ref|YP_003406673.1|	864	DUF445	Protein	12.9	1.2	6.5e-05	0.073	208	319	34	144	5	162	0.72
gi|284176398|ref|YP_003406673.1|	864	DUF1451	Zinc-ribbon	0.7	0.3	0.43	4.8e+02	33	78	52	93	19	114	0.36
gi|284176398|ref|YP_003406673.1|	864	DUF1451	Zinc-ribbon	12.7	0.2	8.6e-05	0.096	3	96	95	188	93	200	0.91
gi|284176398|ref|YP_003406673.1|	864	DUF2884	Protein	11.3	7.2	0.00016	0.18	51	186	40	171	34	190	0.70
gi|284176398|ref|YP_003406673.1|	864	Baculo_PEP_C	Baculovirus	8.9	0.5	0.0013	1.5	41	102	49	110	34	118	0.86
gi|284176398|ref|YP_003406673.1|	864	Baculo_PEP_C	Baculovirus	4.2	0.1	0.036	40	51	102	114	165	101	199	0.55
gi|284176398|ref|YP_003406673.1|	864	Prominin	Prominin	9.4	1.8	0.00021	0.23	315	411	34	131	18	197	0.86
gi|284176398|ref|YP_003406673.1|	864	ApoO	Apolipoprotein	5.5	0.4	0.014	15	14	55	60	101	26	116	0.61
gi|284176398|ref|YP_003406673.1|	864	ApoO	Apolipoprotein	1.1	0.0	0.33	3.7e+02	10	51	133	174	115	192	0.60
gi|284176398|ref|YP_003406673.1|	864	Mitofilin	Mitochondrial	8.2	9.2	0.00083	0.94	148	283	18	151	6	207	0.58
gi|284176398|ref|YP_003406673.1|	864	ISG65-75	Invariant	7.0	9.1	0.0027	3	78	149	23	92	9	108	0.70
gi|284176398|ref|YP_003406673.1|	864	ISG65-75	Invariant	4.3	0.2	0.018	20	46	127	127	209	122	215	0.80
gi|284176399|ref|YP_003406674.1|	42	MttA_Hcf106	mttA/Hcf106	32.5	1.4	2.2e-12	3.9e-08	2	34	3	35	2	42	0.91
gi|284176400|ref|YP_003406675.1|	485	Sortilin-Vps10	Sortilin,	19.6	0.0	7e-08	0.00031	2	69	284	355	283	380	0.82
gi|284176400|ref|YP_003406675.1|	485	BNR	BNR/Asp-box	-1.8	0.4	1.4	6.2e+03	4	9	244	249	244	249	0.87
gi|284176400|ref|YP_003406675.1|	485	BNR	BNR/Asp-box	13.7	0.5	1e-05	0.046	1	11	286	296	286	297	0.94
gi|284176400|ref|YP_003406675.1|	485	BNR	BNR/Asp-box	3.2	0.9	0.031	1.4e+02	5	12	338	345	335	345	0.88
gi|284176400|ref|YP_003406675.1|	485	BNR_2	BNR	12.2	0.0	1.8e-05	0.082	120	200	264	345	195	362	0.75
gi|284176400|ref|YP_003406675.1|	485	UCR_Fe-S_N	Ubiquitinol-cytochrome	10.4	1.6	7e-05	0.31	5	29	4	27	1	28	0.87
gi|284176401|ref|YP_003406676.1|	1285	D5_N	D5	0.6	0.3	0.13	6e+02	44	73	329	358	280	390	0.65
gi|284176401|ref|YP_003406676.1|	1285	D5_N	D5	51.2	0.0	3.6e-17	1.6e-13	63	151	638	730	612	730	0.78
gi|284176401|ref|YP_003406676.1|	1285	Pox_D5	Poxvirus	-4.1	0.0	4	1.8e+04	22	42	537	557	533	561	0.83
gi|284176401|ref|YP_003406676.1|	1285	Pox_D5	Poxvirus	25.6	0.2	2.9e-09	1.3e-05	2	64	947	1005	946	1042	0.84
gi|284176401|ref|YP_003406676.1|	1285	RFX_DNA_binding	RFX	18.4	0.1	5.4e-07	0.0024	10	60	957	1008	951	1021	0.84
gi|284176401|ref|YP_003406676.1|	1285	Cdc6_C	CDC6,	-1.3	0.5	0.5	2.3e+03	3	26	596	617	595	619	0.77
gi|284176401|ref|YP_003406676.1|	1285	Cdc6_C	CDC6,	10.9	0.2	7.4e-05	0.33	6	47	957	998	955	1004	0.85
gi|284176403|ref|YP_003406678.1|	80	Fe_dep_repress	Iron	19.4	0.0	1.5e-07	0.00092	9	53	9	56	4	60	0.87
gi|284176403|ref|YP_003406678.1|	80	DsrD	Dissimilatory	13.5	0.0	1.1e-05	0.063	8	58	12	66	5	72	0.73
gi|284176403|ref|YP_003406678.1|	80	HrcA_DNA-bdg	Winged	12.0	0.0	2.1e-05	0.13	5	41	5	41	2	51	0.87
gi|284176404|ref|YP_003406679.1|	94	DUF2460	Conserved	13.3	0.0	4.7e-06	0.042	35	74	27	65	13	67	0.92
gi|284176404|ref|YP_003406679.1|	94	DUF5040	Domain	11.8	0.0	1.3e-05	0.12	121	178	11	68	3	86	0.84
gi|284176406|ref|YP_003406681.1|	60	UBA_6	UBA-like	12.3	0.0	6.8e-06	0.12	19	39	23	43	17	45	0.87
gi|284176407|ref|YP_003406682.1|	80	LapA_dom	Lipopolysaccharide	9.7	0.0	4.2e-05	0.75	18	38	9	29	5	38	0.87
gi|284176407|ref|YP_003406682.1|	80	LapA_dom	Lipopolysaccharide	0.7	1.2	0.026	4.6e+02	27	43	58	74	53	80	0.63
gi|284176408|ref|YP_003406683.1|	158	DZR	Double	18.4	0.4	6.3e-07	0.0016	11	37	53	86	49	90	0.86
gi|284176408|ref|YP_003406683.1|	158	Zn-ribbon_8	Zinc	15.5	1.0	5.5e-06	0.014	6	34	55	85	54	90	0.87
gi|284176408|ref|YP_003406683.1|	158	TF_Zn_Ribbon	TFIIB	5.6	0.0	0.0042	11	19	29	54	64	47	75	0.83
gi|284176408|ref|YP_003406683.1|	158	TF_Zn_Ribbon	TFIIB	7.7	0.1	0.00095	2.4	1	10	78	87	78	96	0.75
gi|284176408|ref|YP_003406683.1|	158	zf-HIT	HIT	0.6	0.1	0.21	5.4e+02	15	22	56	63	53	64	0.85
gi|284176408|ref|YP_003406683.1|	158	zf-HIT	HIT	13.6	0.3	1.9e-05	0.047	11	22	75	86	72	91	0.88
gi|284176408|ref|YP_003406683.1|	158	HypA	Hydrogenase/urease	13.3	0.1	2.5e-05	0.063	64	99	48	90	34	102	0.75
gi|284176408|ref|YP_003406683.1|	158	HypA	Hydrogenase/urease	-1.7	0.0	1.1	2.9e+03	65	81	111	126	91	140	0.69
gi|284176408|ref|YP_003406683.1|	158	zf-ribbon_3	zinc-ribbon	5.2	0.0	0.0059	15	14	26	52	64	50	64	0.89
gi|284176408|ref|YP_003406683.1|	158	zf-ribbon_3	zinc-ribbon	5.3	0.7	0.0053	14	2	8	77	83	76	84	0.87
gi|284176408|ref|YP_003406683.1|	158	Zn_ribbon_SprT	SprT-like	1.0	0.1	0.16	4e+02	6	13	56	63	56	67	0.83
gi|284176408|ref|YP_003406683.1|	158	Zn_ribbon_SprT	SprT-like	11.2	0.3	0.0001	0.26	4	17	77	90	75	92	0.88
gi|284176408|ref|YP_003406683.1|	158	Zn_ribbon_SprT	SprT-like	-4.0	0.3	5.7	1.5e+04	7	11	119	122	118	123	0.80
gi|284176409|ref|YP_003406684.1|	89	RinB	Transcriptional	12.6	0.1	1.3e-05	0.11	31	44	46	58	40	62	0.87
gi|284176409|ref|YP_003406684.1|	89	DpaA_N	Dipicolinate	11.5	0.0	2.6e-05	0.24	8	37	3	38	3	86	0.56
gi|284176411|ref|YP_003406686.1|	143	Mating_N	Mating-type	12.3	0.1	2.2e-05	0.13	11	59	35	79	26	80	0.85
gi|284176411|ref|YP_003406686.1|	143	Mating_N	Mating-type	1.3	0.1	0.061	3.6e+02	5	23	121	139	118	140	0.81
gi|284176411|ref|YP_003406686.1|	143	Phage_gp53	Base	13.6	0.0	6.7e-06	0.04	80	129	13	62	3	99	0.76
gi|284176411|ref|YP_003406686.1|	143	SMBP	Small	9.1	0.2	0.00024	1.4	70	94	33	57	19	75	0.68
gi|284176411|ref|YP_003406686.1|	143	SMBP	Small	4.6	0.1	0.0061	36	63	85	118	140	91	143	0.69
gi|284176412|ref|YP_003406687.1|	207	Phage_integrase	Phage	90.0	0.1	8.1e-30	1.5e-25	2	168	18	203	17	206	0.91