# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- adh_short PF00106.20 gi|284167036|ref|YP_003405314.1| - 2.3e-41 141.5 0.7 2.9e-41 141.1 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167036|ref|YP_003405314.1| - 1e-29 104.0 0.0 1.4e-29 103.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167036|ref|YP_003405314.1| - 9.1e-17 61.2 0.2 1.4e-16 60.7 0.1 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167036|ref|YP_003405314.1| - 1.9e-07 30.7 0.1 3.2e-07 30.0 0.1 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167036|ref|YP_003405314.1| - 1.6e-06 28.2 0.4 8.7e-06 25.8 0.2 2.0 1 1 0 2 2 2 1 NADH(P)-binding F420_oxidored PF03807.12 gi|284167036|ref|YP_003405314.1| - 0.00062 20.1 0.2 0.0016 18.8 0.1 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.14 gi|284167036|ref|YP_003405314.1| - 0.00092 18.3 0.2 0.0026 16.8 0.0 1.7 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Eno-Rase_NADH_b PF12242.3 gi|284167036|ref|YP_003405314.1| - 0.004 16.9 0.1 0.0084 15.8 0.1 1.5 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Nuc_rec_co-act PF08815.5 gi|284167036|ref|YP_003405314.1| - 0.0097 15.4 0.2 0.1 12.1 0.0 2.2 2 0 0 2 2 2 1 Nuclear receptor coactivator RmlD_sub_bind PF04321.12 gi|284167036|ref|YP_003405314.1| - 0.0099 14.7 0.1 0.042 12.7 0.0 1.9 2 0 0 2 2 2 1 RmlD substrate binding domain 2-Hacid_dh_C PF02826.14 gi|284167036|ref|YP_003405314.1| - 0.023 13.8 0.0 0.037 13.1 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|284167036|ref|YP_003405314.1| - 0.049 13.2 0.1 0.071 12.7 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HHH_5 PF14520.1 gi|284167036|ref|YP_003405314.1| - 0.074 13.2 0.0 0.38 10.9 0.0 2.0 1 1 0 1 1 1 0 Helix-hairpin-helix domain DUF35 PF01796.12 gi|284167037|ref|YP_003405315.1| - 3e-12 46.5 0.7 4e-12 46.1 0.5 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|284167037|ref|YP_003405315.1| - 0.00012 21.8 0.6 0.00025 20.8 0.4 1.6 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Nudix_N_2 PF14803.1 gi|284167037|ref|YP_003405315.1| - 0.11 12.2 1.0 0.21 11.3 0.1 1.8 2 0 0 2 2 2 0 Nudix N-terminal NOB1_Zn_bind PF08772.6 gi|284167037|ref|YP_003405315.1| - 0.14 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Thiolase_N PF00108.18 gi|284167038|ref|YP_003405316.1| - 9.2e-16 57.6 0.5 1.7e-13 50.1 0.0 2.2 2 0 0 2 2 2 2 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|284167038|ref|YP_003405316.1| - 2.5e-08 33.3 0.1 5.8e-08 32.2 0.0 1.7 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|284167038|ref|YP_003405316.1| - 5.8e-08 32.5 2.9 6.6e-08 32.3 0.4 2.2 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 gi|284167038|ref|YP_003405316.1| - 0.0016 18.2 0.2 0.046 13.5 0.0 2.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Acyl-CoA_dh_1 PF00441.19 gi|284167040|ref|YP_003405318.1| - 6.3e-42 143.2 0.5 1.3e-41 142.2 0.4 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167040|ref|YP_003405318.1| - 4.1e-22 78.8 3.3 6.3e-22 78.2 0.8 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167040|ref|YP_003405318.1| - 2.8e-16 58.7 0.1 5.2e-16 57.8 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.6 gi|284167040|ref|YP_003405318.1| - 3.5e-13 49.9 0.3 8.5e-13 48.7 0.2 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DUF35_N PF12172.3 gi|284167041|ref|YP_003405319.1| - 3.6e-07 29.9 0.1 7.2e-07 28.9 0.1 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF35 PF01796.12 gi|284167041|ref|YP_003405319.1| - 3.8e-06 27.0 0.0 5.6e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain NMD3 PF04981.8 gi|284167041|ref|YP_003405319.1| - 0.0019 17.3 2.1 0.0029 16.7 1.5 1.3 1 0 0 1 1 1 1 NMD3 family DZR PF12773.2 gi|284167041|ref|YP_003405319.1| - 0.081 12.7 0.8 0.14 12.0 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|284167041|ref|YP_003405319.1| - 0.23 10.7 4.0 0.42 9.8 2.8 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|284167041|ref|YP_003405319.1| - 0.36 10.6 2.2 0.7 9.7 1.5 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Thiolase_N PF00108.18 gi|284167042|ref|YP_003405320.1| - 0.0061 15.5 0.6 0.01 14.8 0.4 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_N PF00108.18 gi|284167043|ref|YP_003405321.1| - 6.1e-06 25.4 0.9 7.6e-06 25.0 0.0 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain GYD PF08734.6 gi|284167043|ref|YP_003405321.1| - 0.029 14.0 0.1 0.083 12.6 0.0 1.7 1 0 0 1 1 1 0 GYD domain ECH PF00378.15 gi|284167044|ref|YP_003405322.1| - 3.6e-54 183.4 0.0 4.1e-54 183.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family GHMP_kinases_C PF08544.8 gi|284167044|ref|YP_003405322.1| - 0.076 13.2 0.1 0.35 11.1 0.0 2.1 3 0 0 3 3 3 0 GHMP kinases C terminal Amidohydro_2 PF04909.9 gi|284167045|ref|YP_003405323.1| - 1.4e-32 113.3 5.7 2e-32 112.8 3.9 1.3 1 1 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.16 gi|284167045|ref|YP_003405323.1| - 0.00046 19.4 0.0 0.0073 15.5 0.0 2.6 3 0 0 3 3 3 1 TatD related DNase DUF3939 PF13075.1 gi|284167045|ref|YP_003405323.1| - 0.032 13.9 0.0 0.053 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3939) SnoaL_4 PF13577.1 gi|284167046|ref|YP_003405324.1| - 7.4e-32 109.9 2.1 9.1e-32 109.6 1.5 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.2 gi|284167046|ref|YP_003405324.1| - 6.9e-05 23.1 1.1 0.00012 22.4 0.7 1.5 1 1 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.1 gi|284167046|ref|YP_003405324.1| - 0.00013 22.0 0.1 0.00025 21.0 0.1 1.6 1 1 0 1 1 1 1 SnoaL-like domain Ring_hydroxyl_B PF00866.13 gi|284167046|ref|YP_003405324.1| - 0.0011 18.6 0.1 0.0057 16.3 0.0 1.9 1 1 1 2 2 2 1 Ring hydroxylating beta subunit DUF3225 PF11533.3 gi|284167046|ref|YP_003405324.1| - 0.0027 17.3 0.2 0.011 15.3 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3225) 3HCDH_N PF02737.13 gi|284167047|ref|YP_003405325.1| - 1.8e-58 197.1 0.9 2.4e-58 196.7 0.6 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|284167047|ref|YP_003405325.1| - 2.4e-27 95.1 0.2 6.3e-27 93.8 0.1 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.10 gi|284167047|ref|YP_003405325.1| - 3.8e-07 30.0 0.0 7.4e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|284167047|ref|YP_003405325.1| - 0.00036 20.2 0.0 0.00062 19.5 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.12 gi|284167047|ref|YP_003405325.1| - 0.0009 19.6 0.8 0.0026 18.1 0.6 2.0 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|284167047|ref|YP_003405325.1| - 0.0015 17.7 0.1 0.0022 17.1 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|284167047|ref|YP_003405325.1| - 0.0057 16.0 0.4 0.0096 15.3 0.3 1.5 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.16 gi|284167047|ref|YP_003405325.1| - 0.014 15.0 0.4 0.063 12.8 0.1 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.1 gi|284167047|ref|YP_003405325.1| - 0.014 15.4 0.1 0.036 14.0 0.1 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.13 gi|284167047|ref|YP_003405325.1| - 0.017 15.1 2.2 0.1 12.5 0.2 2.7 1 1 0 2 2 2 0 TrkA-N domain DAO PF01266.19 gi|284167047|ref|YP_003405325.1| - 0.16 10.8 1.0 0.29 10.0 0.7 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase AMP-binding PF00501.23 gi|284167048|ref|YP_003405326.1| - 2.2e-69 233.8 0.0 2.9e-69 233.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167048|ref|YP_003405326.1| - 1.2e-13 51.7 0.1 2.4e-13 50.7 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MaoC_dehydrat_N PF13452.1 gi|284167049|ref|YP_003405327.1| - 1.3e-14 54.0 0.1 1.6e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.17 gi|284167049|ref|YP_003405327.1| - 0.024 14.7 0.0 0.063 13.4 0.0 1.6 2 0 0 2 2 2 0 Thioesterase superfamily MaoC_dehydratas PF01575.14 gi|284167050|ref|YP_003405328.1| - 8e-10 38.1 0.0 9.9e-10 37.8 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain AMP-binding PF00501.23 gi|284167051|ref|YP_003405329.1| - 6.6e-78 261.9 0.0 8.4e-78 261.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167051|ref|YP_003405329.1| - 1.1e-15 58.3 0.1 2.9e-15 56.9 0.1 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.1 gi|284167052|ref|YP_003405330.1| - 5.4e-06 26.3 0.0 1.4e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|284167052|ref|YP_003405330.1| - 2.4e-05 22.9 0.0 3.7e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme HAD_2 PF13419.1 gi|284167052|ref|YP_003405330.1| - 0.11 12.6 0.1 9.5 6.4 0.0 2.8 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase 3HCDH_N PF02737.13 gi|284167054|ref|YP_003405332.1| - 8.5e-63 211.2 0.1 1.4e-62 210.5 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH PF00378.15 gi|284167054|ref|YP_003405332.1| - 2.9e-54 183.7 0.0 4.4e-54 183.1 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family 3HCDH PF00725.17 gi|284167054|ref|YP_003405332.1| - 3.1e-48 162.1 0.2 6.6e-30 103.3 0.0 3.5 3 0 0 3 3 3 3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|284167054|ref|YP_003405332.1| - 1.1e-05 25.2 0.0 3e-05 23.7 0.0 1.8 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|284167054|ref|YP_003405332.1| - 4.4e-05 23.3 0.2 0.00054 19.8 0.0 2.6 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|284167054|ref|YP_003405332.1| - 0.12 12.8 1.2 0.69 10.3 0.9 2.3 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Lactamase_B PF00753.22 gi|284167055|ref|YP_003405333.1| - 7.9e-25 87.6 1.3 1.2e-24 87.0 0.5 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|284167055|ref|YP_003405333.1| - 3.3e-06 26.7 0.0 4.5e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|284167055|ref|YP_003405333.1| - 0.095 12.4 0.1 0.19 11.4 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain 4HBT PF03061.17 gi|284167056|ref|YP_003405334.1| - 7.4e-10 38.8 0.3 1e-09 38.3 0.2 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.1 gi|284167056|ref|YP_003405334.1| - 0.00065 19.5 0.1 0.00095 18.9 0.1 1.2 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.1 gi|284167056|ref|YP_003405334.1| - 0.01 15.8 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) Acyl-CoA_dh_1 PF00441.19 gi|284167057|ref|YP_003405335.1| - 6.3e-26 91.2 4.8 1.1e-25 90.4 3.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167057|ref|YP_003405335.1| - 3.9e-22 78.9 0.3 1.2e-21 77.3 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167057|ref|YP_003405335.1| - 1.4e-17 62.9 0.0 3.3e-17 61.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.6 gi|284167057|ref|YP_003405335.1| - 1.8e-06 28.2 3.7 3.5e-06 27.3 2.6 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain adh_short PF00106.20 gi|284167058|ref|YP_003405336.1| - 3.3e-34 118.1 1.6 4.3e-34 117.8 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167058|ref|YP_003405336.1| - 3.9e-22 79.2 0.0 4.6e-22 78.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167058|ref|YP_003405336.1| - 5.3e-13 49.0 0.7 7.2e-13 48.5 0.5 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167058|ref|YP_003405336.1| - 0.00058 19.3 0.1 0.00086 18.8 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.13 gi|284167058|ref|YP_003405336.1| - 0.13 11.8 0.4 0.48 10.0 0.2 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH PF00378.15 gi|284167060|ref|YP_003405338.1| - 3.3e-62 209.7 0.0 4.2e-62 209.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|284167060|ref|YP_003405338.1| - 1.5e-06 28.3 0.1 4.5e-06 26.7 0.0 1.8 2 0 0 2 2 2 1 2-enoyl-CoA Hydratase C-terminal region ABC_tran PF00005.22 gi|284167061|ref|YP_003405339.1| - 7.6e-28 97.5 0.0 1.2e-27 96.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167061|ref|YP_003405339.1| - 1.2e-09 38.6 0.2 0.00038 20.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|284167061|ref|YP_003405339.1| - 0.00058 20.0 0.0 0.0014 18.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|284167061|ref|YP_003405339.1| - 0.0017 19.1 0.1 0.0028 18.4 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|284167061|ref|YP_003405339.1| - 0.0021 17.4 0.0 0.0041 16.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|284167061|ref|YP_003405339.1| - 0.0023 17.4 0.1 0.0058 16.1 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|284167061|ref|YP_003405339.1| - 0.0023 18.2 0.0 0.0028 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|284167061|ref|YP_003405339.1| - 0.0045 16.2 0.5 0.051 12.8 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_33 PF13671.1 gi|284167061|ref|YP_003405339.1| - 0.0084 15.9 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|284167061|ref|YP_003405339.1| - 0.012 15.7 0.0 0.019 15.1 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|284167061|ref|YP_003405339.1| - 0.028 14.3 0.0 0.046 13.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.1 gi|284167061|ref|YP_003405339.1| - 0.036 13.9 0.3 0.5 10.3 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Thymidylate_kin PF02223.12 gi|284167061|ref|YP_003405339.1| - 0.038 13.3 0.4 0.72 9.1 0.0 2.1 1 1 1 2 2 2 0 Thymidylate kinase UPF0079 PF02367.12 gi|284167061|ref|YP_003405339.1| - 0.064 12.8 0.0 0.15 11.6 0.0 1.6 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 DUF258 PF03193.11 gi|284167061|ref|YP_003405339.1| - 0.067 12.3 0.0 0.095 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_14 PF13173.1 gi|284167061|ref|YP_003405339.1| - 0.1 12.5 0.0 0.91 9.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|284167061|ref|YP_003405339.1| - 0.11 12.0 0.0 0.3 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|284167061|ref|YP_003405339.1| - 0.14 11.8 0.0 0.92 9.1 0.0 2.0 1 1 0 1 1 1 0 NTPase ABC_tran PF00005.22 gi|284167062|ref|YP_003405340.1| - 1.4e-23 83.6 0.0 2.1e-23 83.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.3 gi|284167062|ref|YP_003405340.1| - 4.2e-10 39.0 0.1 7.7e-10 38.2 0.1 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.1 gi|284167062|ref|YP_003405340.1| - 7e-10 39.3 0.6 0.00029 20.8 0.1 2.1 2 0 0 2 2 2 2 AAA domain AAA_10 PF12846.2 gi|284167062|ref|YP_003405340.1| - 0.00084 18.8 0.2 0.7 9.2 0.1 2.2 2 0 0 2 2 2 2 AAA-like domain AAA_23 PF13476.1 gi|284167062|ref|YP_003405340.1| - 0.00095 19.5 0.6 0.0015 18.8 0.4 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|284167062|ref|YP_003405340.1| - 0.0026 17.2 0.1 0.0048 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|284167062|ref|YP_003405340.1| - 0.0044 16.2 0.0 0.0095 15.1 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|284167062|ref|YP_003405340.1| - 0.024 14.7 0.0 0.16 12.1 0.0 2.1 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.14 gi|284167062|ref|YP_003405340.1| - 0.11 11.7 0.1 1.2 8.2 0.1 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|284167062|ref|YP_003405340.1| - 0.11 12.4 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AIG1 PF04548.11 gi|284167062|ref|YP_003405340.1| - 0.31 10.1 1.6 1.3 8.0 0.1 2.1 1 1 1 2 2 2 0 AIG1 family BPD_transp_2 PF02653.11 gi|284167063|ref|YP_003405341.1| - 1.1e-32 113.0 32.9 1.1e-32 113.0 22.8 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF443 PF04276.7 gi|284167063|ref|YP_003405341.1| - 0.11 11.9 0.0 0.11 11.9 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF443) BPD_transp_2 PF02653.11 gi|284167064|ref|YP_003405342.1| - 2.6e-37 128.2 41.8 3.1e-37 128.0 29.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_6 PF13458.1 gi|284167065|ref|YP_003405343.1| - 3.3e-33 115.4 0.3 4.2e-33 115.1 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.1 gi|284167065|ref|YP_003405343.1| - 3.2e-13 49.1 0.0 8.4e-07 28.0 0.0 2.1 2 0 0 2 2 2 2 Periplasmic binding protein domain ANF_receptor PF01094.23 gi|284167065|ref|YP_003405343.1| - 5.9e-12 45.0 0.0 8.3e-12 44.5 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region TAT_signal PF10518.4 gi|284167065|ref|YP_003405343.1| - 0.0024 17.7 2.0 0.0082 16.0 1.4 2.0 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence SnoaL_4 PF13577.1 gi|284167066|ref|YP_003405344.1| - 4.5e-26 91.2 0.3 5.7e-26 90.9 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.2 gi|284167066|ref|YP_003405344.1| - 3.8e-09 36.8 0.2 6.1e-09 36.2 0.1 1.4 1 1 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|284167066|ref|YP_003405344.1| - 1.6e-06 28.2 0.1 2.1e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.1 gi|284167066|ref|YP_003405344.1| - 0.00011 22.2 0.1 0.00014 21.9 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.7 gi|284167066|ref|YP_003405344.1| - 0.0051 16.3 0.0 0.0086 15.6 0.0 1.4 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase NTF2 PF02136.15 gi|284167066|ref|YP_003405344.1| - 0.072 13.4 0.0 0.09 13.1 0.0 1.2 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain adh_short_C2 PF13561.1 gi|284167067|ref|YP_003405345.1| - 1.6e-34 119.7 0.1 1.9e-34 119.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|284167067|ref|YP_003405345.1| - 1.7e-31 109.4 2.8 2.2e-31 109.0 2.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|284167067|ref|YP_003405345.1| - 5.2e-11 42.5 1.7 8.7e-11 41.8 1.1 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167067|ref|YP_003405345.1| - 0.0006 19.3 2.2 0.0011 18.4 1.5 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.13 gi|284167067|ref|YP_003405345.1| - 0.0088 15.7 0.4 0.018 14.6 0.3 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Eno-Rase_NADH_b PF12242.3 gi|284167067|ref|YP_003405345.1| - 4.4 7.1 6.1 0.82 9.4 0.3 2.4 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMP-binding PF00501.23 gi|284167068|ref|YP_003405346.1| - 3.1e-64 216.8 0.0 4.1e-64 216.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167068|ref|YP_003405346.1| - 5.4e-15 56.1 0.2 1.1e-14 55.1 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.1 gi|284167068|ref|YP_003405346.1| - 0.00038 20.4 0.9 0.00075 19.4 0.3 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain MaoC_dehydratas PF01575.14 gi|284167069|ref|YP_003405347.1| - 2.4e-19 68.9 0.0 2.8e-19 68.6 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.1 gi|284167069|ref|YP_003405347.1| - 0.0042 16.8 0.0 0.0078 15.9 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase SnoaL_4 PF13577.1 gi|284167070|ref|YP_003405348.1| - 2.1e-28 98.7 1.7 2.4e-28 98.5 1.2 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.2 gi|284167070|ref|YP_003405348.1| - 1.9e-07 31.4 1.0 2.6e-07 30.9 0.7 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|284167070|ref|YP_003405348.1| - 1.1e-06 28.8 0.2 1.4e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.1 gi|284167070|ref|YP_003405348.1| - 0.028 14.4 0.5 0.042 13.8 0.4 1.3 1 1 0 1 1 1 0 SnoaL-like domain adh_short PF00106.20 gi|284167071|ref|YP_003405349.1| - 3.9e-31 108.2 3.4 5.6e-31 107.7 2.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167071|ref|YP_003405349.1| - 6.5e-27 94.8 0.1 7.6e-27 94.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167071|ref|YP_003405349.1| - 4.8e-13 49.1 1.5 6.6e-13 48.7 1.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167071|ref|YP_003405349.1| - 0.00036 20.0 0.2 0.00055 19.4 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167071|ref|YP_003405349.1| - 0.0073 16.3 1.1 0.012 15.5 0.7 1.4 1 0 0 1 1 1 1 NADH(P)-binding Eno-Rase_NADH_b PF12242.3 gi|284167071|ref|YP_003405349.1| - 0.009 15.7 0.8 0.018 14.7 0.5 1.5 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Saccharop_dh PF03435.13 gi|284167071|ref|YP_003405349.1| - 0.0092 15.0 0.8 0.014 14.4 0.6 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase TrkA_N PF02254.13 gi|284167071|ref|YP_003405349.1| - 0.028 14.3 0.8 0.045 13.7 0.6 1.4 1 0 0 1 1 1 0 TrkA-N domain 3HCDH_N PF02737.13 gi|284167071|ref|YP_003405349.1| - 0.038 13.6 0.9 0.072 12.7 0.4 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|284167071|ref|YP_003405349.1| - 0.076 12.1 0.1 0.12 11.4 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3Beta_HSD PF01073.14 gi|284167071|ref|YP_003405349.1| - 0.12 11.0 0.4 0.19 10.3 0.3 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.20 gi|284167072|ref|YP_003405350.1| - 4.5e-34 117.7 2.0 5.7e-34 117.4 1.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167072|ref|YP_003405350.1| - 6.4e-27 94.8 0.0 7.6e-27 94.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167072|ref|YP_003405350.1| - 4.1e-12 46.1 0.5 8e-12 45.1 0.4 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167072|ref|YP_003405350.1| - 0.00063 19.2 0.2 0.00081 18.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167072|ref|YP_003405350.1| - 0.044 13.7 2.9 0.1 12.5 2.0 1.7 1 1 0 1 1 1 0 NADH(P)-binding FAD_binding_2 PF00890.19 gi|284167073|ref|YP_003405351.1| - 1.2e-73 248.3 1.1 1.4e-73 248.1 0.8 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|284167073|ref|YP_003405351.1| - 1.5e-09 37.2 5.1 0.00014 20.9 1.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|284167073|ref|YP_003405351.1| - 1.6e-07 30.1 3.3 0.00015 20.3 1.4 2.2 2 0 0 2 2 2 2 HI0933-like protein Thi4 PF01946.12 gi|284167073|ref|YP_003405351.1| - 6.2e-06 25.4 0.3 1.4e-05 24.3 0.2 1.6 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.9 gi|284167073|ref|YP_003405351.1| - 9.2e-05 22.4 0.1 0.032 14.1 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|284167073|ref|YP_003405351.1| - 0.00033 19.8 0.5 0.00033 19.8 0.3 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167073|ref|YP_003405351.1| - 0.0016 18.4 4.5 0.0075 16.2 3.2 2.2 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|284167073|ref|YP_003405351.1| - 0.4 9.5 3.8 5.9 5.6 1.8 2.2 2 0 0 2 2 2 0 Glucose inhibited division protein A PPDK_N PF01326.14 gi|284167074|ref|YP_003405352.1| - 0.0086 15.1 0.1 0.013 14.5 0.1 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VASP_tetra PF08776.6 gi|284167074|ref|YP_003405352.1| - 1.1 8.6 4.1 0.35 10.2 0.3 2.1 2 0 0 2 2 2 0 VASP tetramerisation domain FAD_binding_2 PF00890.19 gi|284167075|ref|YP_003405353.1| - 6.4e-59 199.8 0.0 1.3e-58 198.8 0.0 1.4 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|284167075|ref|YP_003405353.1| - 4.4e-18 65.3 2.7 5.3e-09 35.4 0.5 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|284167075|ref|YP_003405353.1| - 2.1e-10 40.3 3.5 2.4e-09 36.7 1.2 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|284167075|ref|YP_003405353.1| - 6.8e-08 32.6 0.6 8.3e-05 22.5 0.2 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|284167075|ref|YP_003405353.1| - 2.5e-07 30.0 0.7 4.1e-07 29.3 0.5 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.1 gi|284167075|ref|YP_003405353.1| - 8.6e-07 29.2 1.0 0.0059 16.6 0.4 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|284167075|ref|YP_003405353.1| - 1.4e-06 27.0 0.6 0.00044 18.8 0.7 2.1 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.1 gi|284167075|ref|YP_003405353.1| - 4.4e-06 26.6 3.7 1e-05 25.4 2.6 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|284167075|ref|YP_003405353.1| - 0.00023 21.5 2.2 0.5 10.8 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|284167075|ref|YP_003405353.1| - 0.0042 15.9 1.4 0.03 13.1 0.8 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A DUF3645 PF12359.3 gi|284167075|ref|YP_003405353.1| - 0.0052 15.8 0.2 0.013 14.6 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3645) FAD_binding_3 PF01494.14 gi|284167075|ref|YP_003405353.1| - 0.02 13.9 0.6 0.031 13.3 0.1 1.5 2 0 0 2 2 2 0 FAD binding domain Lycopene_cycl PF05834.7 gi|284167075|ref|YP_003405353.1| - 0.16 10.8 0.4 0.22 10.3 0.3 1.1 1 0 0 1 1 1 0 Lycopene cyclase protein AlaDh_PNT_C PF01262.16 gi|284167075|ref|YP_003405353.1| - 0.22 11.0 1.3 0.39 10.2 0.9 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Inositol_P PF00459.20 gi|284167076|ref|YP_003405354.1| - 8.9e-60 202.2 0.0 1.3e-59 201.6 0.0 1.2 1 0 0 1 1 1 1 Inositol monophosphatase family NAD_kinase PF01513.16 gi|284167076|ref|YP_003405354.1| - 2.3e-35 121.7 0.3 3.5e-35 121.1 0.2 1.3 1 0 0 1 1 1 1 ATP-NAD kinase FBPase PF00316.15 gi|284167076|ref|YP_003405354.1| - 0.071 11.9 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase Aldedh PF00171.17 gi|284167077|ref|YP_003405355.1| - 5.9e-160 532.5 0.0 6.7e-160 532.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|284167077|ref|YP_003405355.1| - 1e-05 24.4 0.0 1.7e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.6 gi|284167077|ref|YP_003405355.1| - 0.17 11.1 0.0 5.6 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) HTH_20 PF12840.2 gi|284167078|ref|YP_003405356.1| - 0.0029 17.3 0.6 0.007 16.1 0.4 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain CCG PF02754.11 gi|284167079|ref|YP_003405357.1| - 5.5e-17 61.5 0.0 6.3e-12 45.3 0.1 2.5 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|284167079|ref|YP_003405357.1| - 8e-11 41.7 7.4 8.1e-11 41.7 3.7 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|284167079|ref|YP_003405357.1| - 1.6e-10 41.0 5.3 1.6e-10 41.0 3.6 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|284167079|ref|YP_003405357.1| - 6.6e-10 38.1 12.4 1.6e-05 24.3 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|284167079|ref|YP_003405357.1| - 1.4e-09 38.2 4.7 0.0025 18.1 0.3 3.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|284167079|ref|YP_003405357.1| - 1.8e-07 30.8 13.8 2.9e-06 26.9 9.0 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|284167079|ref|YP_003405357.1| - 8.9e-07 28.4 19.4 9.9e-05 22.0 1.3 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|284167079|ref|YP_003405357.1| - 9.5e-07 29.1 22.1 4e-06 27.1 7.7 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|284167079|ref|YP_003405357.1| - 7.7e-05 22.3 23.5 0.00014 21.5 2.0 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|284167079|ref|YP_003405357.1| - 0.0001 22.5 9.7 0.0001 22.5 6.8 2.8 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|284167079|ref|YP_003405357.1| - 0.00011 21.9 11.1 0.019 14.8 0.3 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|284167079|ref|YP_003405357.1| - 0.00063 19.8 19.5 0.0058 16.8 0.8 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|284167079|ref|YP_003405357.1| - 0.0029 18.3 13.9 0.016 15.9 8.7 2.7 2 1 1 3 3 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|284167079|ref|YP_003405357.1| - 0.2 12.2 12.3 0.72 10.4 0.8 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|284167079|ref|YP_003405357.1| - 0.42 11.2 25.9 0.17 12.5 3.4 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|284167079|ref|YP_003405357.1| - 4.8 7.6 19.4 1.6 9.2 2.4 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain ETF_alpha PF00766.14 gi|284167080|ref|YP_003405358.1| - 1.3e-37 127.2 0.1 2.8e-37 126.1 0.1 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.16 gi|284167080|ref|YP_003405358.1| - 3.5e-31 108.1 0.6 5.8e-31 107.4 0.4 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF PF01012.16 gi|284167081|ref|YP_003405359.1| - 7e-34 116.9 1.1 1.3e-33 116.0 0.8 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain AMP-binding PF00501.23 gi|284167082|ref|YP_003405360.1| - 2.4e-74 250.2 0.0 2.8e-74 249.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167082|ref|YP_003405360.1| - 8.9e-13 48.9 0.4 2e-12 47.8 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain S_100 PF01023.14 gi|284167082|ref|YP_003405360.1| - 0.026 13.8 0.0 0.058 12.7 0.0 1.5 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain FrhB_FdhB_N PF04422.8 gi|284167082|ref|YP_003405360.1| - 0.041 13.7 0.2 0.12 12.2 0.1 1.8 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term DHBP_synthase PF00926.14 gi|284167083|ref|YP_003405361.1| - 3.2e-56 189.6 0.0 3.6e-56 189.4 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase CTP-dep_RFKase PF01982.11 gi|284167084|ref|YP_003405362.1| - 1.9e-38 130.8 0.0 2.6e-38 130.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 Abhydrolase_3 PF07859.8 gi|284167085|ref|YP_003405363.1| - 6.9e-77 257.7 0.2 8.3e-77 257.4 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.2 gi|284167085|ref|YP_003405363.1| - 4.5e-06 26.7 0.8 7.9e-06 25.9 0.6 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|284167085|ref|YP_003405363.1| - 6.8e-06 25.9 0.1 1.1e-05 25.1 0.1 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family COesterase PF00135.23 gi|284167085|ref|YP_003405363.1| - 1.7e-05 23.7 0.1 3.4e-05 22.7 0.1 1.3 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.16 gi|284167085|ref|YP_003405363.1| - 0.0014 17.8 0.2 0.0027 16.9 0.1 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family DUF2424 PF10340.4 gi|284167085|ref|YP_003405363.1| - 0.0086 14.7 0.0 0.011 14.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2424) AXE1 PF05448.7 gi|284167085|ref|YP_003405363.1| - 0.02 13.4 0.2 0.48 8.8 0.1 2.2 2 0 0 2 2 2 0 Acetyl xylan esterase (AXE1) Thioesterase PF00975.15 gi|284167085|ref|YP_003405363.1| - 0.03 14.5 0.0 0.046 13.9 0.0 1.4 1 0 0 1 1 1 0 Thioesterase domain DUF2974 PF11187.3 gi|284167085|ref|YP_003405363.1| - 0.041 13.2 0.1 0.057 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Chlorophyllase PF07224.6 gi|284167085|ref|YP_003405363.1| - 0.11 11.2 0.0 0.18 10.5 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase MM_CoA_mutase PF01642.17 gi|284167086|ref|YP_003405364.1| - 1.2e-186 620.8 0.1 1.4e-186 620.6 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase AFOR_C PF01314.13 gi|284167088|ref|YP_003405366.1| - 1.3e-73 247.9 0.7 6.2e-73 245.6 0.5 2.0 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|284167088|ref|YP_003405366.1| - 3.5e-54 183.2 0.0 7.5e-54 182.1 0.0 1.5 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain ThiS PF02597.15 gi|284167089|ref|YP_003405367.1| - 1.6e-11 44.4 0.0 1.8e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.6 gi|284167089|ref|YP_003405367.1| - 0.012 15.6 0.0 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) TGS PF02824.16 gi|284167089|ref|YP_003405367.1| - 0.12 12.1 0.0 4.8 7.0 0.0 2.1 2 0 0 2 2 2 0 TGS domain ABM PF03992.11 gi|284167090|ref|YP_003405368.1| - 1.8e-17 63.0 0.4 2.2e-17 62.8 0.3 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF718 PF05336.8 gi|284167090|ref|YP_003405368.1| - 0.09 12.5 0.0 0.099 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF718) B12-binding PF02310.14 gi|284167091|ref|YP_003405369.1| - 1.7e-20 73.1 0.9 1.9e-20 72.9 0.6 1.0 1 0 0 1 1 1 1 B12 binding domain Staph_haemo PF05480.6 gi|284167091|ref|YP_003405369.1| - 0.052 13.2 0.0 0.14 11.8 0.0 1.7 1 0 0 1 1 1 0 Staphylococcus haemolytic protein MFS_1 PF07690.11 gi|284167092|ref|YP_003405370.1| - 4.8e-42 143.9 68.3 8.1e-38 130.0 29.2 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.14 gi|284167092|ref|YP_003405370.1| - 3.4e-05 22.6 1.5 3.4e-05 22.6 1.0 2.3 2 0 0 2 2 2 2 LacY proton/sugar symporter MFS_2 PF13347.1 gi|284167092|ref|YP_003405370.1| - 0.00019 19.9 8.5 0.00019 19.9 5.9 2.9 1 1 0 2 2 2 2 MFS/sugar transport protein DUF1228 PF06779.9 gi|284167092|ref|YP_003405370.1| - 0.0014 18.5 3.9 0.0014 18.5 2.7 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1228) MFS_1_like PF12832.2 gi|284167092|ref|YP_003405370.1| - 0.0092 15.7 2.4 1.4 8.7 0.0 3.1 2 0 0 2 2 2 2 MFS_1 like family GHMP_kinases_N PF00288.21 gi|284167092|ref|YP_003405370.1| - 6.6 6.8 11.8 19 5.4 0.1 3.7 3 0 0 3 3 3 0 GHMP kinases N terminal domain Pyr_redox_3 PF13738.1 gi|284167093|ref|YP_003405371.1| - 1.6e-27 96.8 0.0 2.9e-27 96.0 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.14 gi|284167093|ref|YP_003405371.1| - 3.8e-16 58.3 0.0 6.6e-15 54.2 0.0 2.1 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.1 gi|284167093|ref|YP_003405371.1| - 3.2e-12 46.3 0.0 1.2e-10 41.2 0.0 2.8 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.1 gi|284167093|ref|YP_003405371.1| - 4.7e-09 35.6 0.0 2e-07 30.2 0.0 2.7 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.1 gi|284167093|ref|YP_003405371.1| - 1.1e-06 28.5 0.0 0.00049 19.9 0.0 3.4 2 1 0 2 2 2 1 FAD-NAD(P)-binding DAO PF01266.19 gi|284167093|ref|YP_003405371.1| - 0.00014 20.9 0.2 0.039 12.8 0.0 3.0 2 1 0 3 3 3 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|284167093|ref|YP_003405371.1| - 0.00019 21.3 0.0 0.003 17.4 0.0 3.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|284167093|ref|YP_003405371.1| - 0.0011 17.9 0.0 0.0023 16.9 0.0 1.6 1 0 0 1 1 1 1 Lycopene cyclase protein 2-Hacid_dh_C PF02826.14 gi|284167093|ref|YP_003405371.1| - 0.0022 17.1 0.0 0.0042 16.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.12 gi|284167093|ref|YP_003405371.1| - 0.0024 17.0 0.3 0.023 13.8 0.0 2.4 3 0 0 3 3 3 1 Thi4 family Pyr_redox PF00070.22 gi|284167093|ref|YP_003405371.1| - 0.0031 17.8 0.1 0.098 13.0 0.1 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Semialdhyde_dh PF01118.19 gi|284167093|ref|YP_003405371.1| - 0.011 16.0 0.0 1.3 9.3 0.0 2.8 3 0 0 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain FAD_binding_2 PF00890.19 gi|284167093|ref|YP_003405371.1| - 0.013 14.4 0.0 0.02 13.7 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_7 PF13241.1 gi|284167093|ref|YP_003405371.1| - 0.023 14.9 0.0 0.24 11.6 0.0 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding HI0933_like PF03486.9 gi|284167093|ref|YP_003405371.1| - 0.025 13.0 0.0 0.41 9.0 0.1 2.1 2 0 0 2 2 2 0 HI0933-like protein FAD_binding_3 PF01494.14 gi|284167093|ref|YP_003405371.1| - 0.064 12.3 0.2 4 6.4 0.1 2.5 2 1 0 2 2 2 0 FAD binding domain SnoaL_4 PF13577.1 gi|284167094|ref|YP_003405372.1| - 2.9e-29 101.5 2.0 3.4e-29 101.3 1.4 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.2 gi|284167094|ref|YP_003405372.1| - 7.9e-08 32.6 0.4 1.2e-07 32.0 0.3 1.4 1 1 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|284167094|ref|YP_003405372.1| - 0.0017 18.5 0.4 0.0024 18.0 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) CaMKII_AD PF08332.5 gi|284167094|ref|YP_003405372.1| - 0.002 18.0 0.0 0.0028 17.5 0.0 1.1 1 0 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II Association SnoaL_3 PF13474.1 gi|284167094|ref|YP_003405372.1| - 0.009 16.0 0.3 0.013 15.5 0.2 1.2 1 0 0 1 1 1 1 SnoaL-like domain Scytalone_dh PF02982.9 gi|284167094|ref|YP_003405372.1| - 0.033 13.7 0.1 0.73 9.4 0.0 2.1 2 0 0 2 2 2 0 Scytalone dehydratase ADH_N PF08240.7 gi|284167095|ref|YP_003405373.1| - 2.4e-28 98.0 7.5 5.5e-28 96.8 5.2 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|284167095|ref|YP_003405373.1| - 2.4e-16 59.4 0.0 4.4e-16 58.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TOBE_2 PF08402.5 gi|284167095|ref|YP_003405373.1| - 0.01 15.8 0.8 2.4 8.1 0.0 3.4 4 0 0 4 4 4 0 TOBE domain Abhydrolase_6 PF12697.2 gi|284167096|ref|YP_003405374.1| - 6.2e-18 65.5 0.1 7.9e-18 65.1 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|284167096|ref|YP_003405374.1| - 4.1e-14 52.5 0.0 6.5e-14 51.8 0.0 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.13 gi|284167096|ref|YP_003405374.1| - 1.2e-11 44.6 0.2 1.5e-11 44.2 0.1 1.4 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.7 gi|284167096|ref|YP_003405374.1| - 1.5e-11 43.3 0.0 1.9e-05 23.3 0.0 2.9 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.16 gi|284167096|ref|YP_003405374.1| - 1.1e-07 31.2 0.1 1.6e-05 24.2 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.3 gi|284167096|ref|YP_003405374.1| - 3.6e-05 23.5 0.0 7.5e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Putative lysophospholipase BAAT_C PF08840.6 gi|284167096|ref|YP_003405374.1| - 0.00037 20.2 0.0 0.002 17.8 0.0 1.9 2 0 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.13 gi|284167096|ref|YP_003405374.1| - 0.00068 18.9 0.1 0.0048 16.2 0.0 2.3 2 1 0 2 2 2 1 Dienelactone hydrolase family DUF1100 PF06500.6 gi|284167096|ref|YP_003405374.1| - 0.084 11.4 0.0 0.18 10.3 0.0 1.6 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1100) DUF2874 PF11396.3 gi|284167097|ref|YP_003405375.1| - 0.083 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2874) Pyr_redox_2 PF07992.9 gi|284167099|ref|YP_003405377.1| - 8.1e-23 81.3 0.3 1e-22 81.0 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|284167099|ref|YP_003405377.1| - 4.8e-09 35.5 4.1 6.5e-06 25.2 0.6 3.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|284167099|ref|YP_003405377.1| - 3.6e-08 33.7 0.1 0.00044 20.3 0.0 2.3 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|284167099|ref|YP_003405377.1| - 2.5e-07 29.9 1.0 4.6e-06 25.7 0.1 2.7 3 0 0 3 3 3 1 FAD binding domain Pyr_redox PF00070.22 gi|284167099|ref|YP_003405377.1| - 4.7e-06 26.9 2.6 0.0036 17.6 0.0 3.2 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|284167099|ref|YP_003405377.1| - 4.9e-06 26.4 0.8 0.00049 20.0 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|284167099|ref|YP_003405377.1| - 1.3e-05 24.4 2.0 0.00082 18.5 0.3 2.3 2 0 0 2 2 2 2 Thi4 family FAD_oxidored PF12831.2 gi|284167099|ref|YP_003405377.1| - 1.6e-05 24.2 0.1 2.3e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|284167099|ref|YP_003405377.1| - 2.1e-05 23.1 0.2 0.0026 16.3 0.2 2.2 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.17 gi|284167099|ref|YP_003405377.1| - 0.00045 19.1 0.9 0.0081 15.0 0.3 2.4 2 1 1 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|284167099|ref|YP_003405377.1| - 0.012 14.6 0.5 0.02 13.9 0.3 1.3 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.20 gi|284167100|ref|YP_003405378.1| - 5.4e-32 111.0 0.6 6.7e-32 110.7 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167100|ref|YP_003405378.1| - 1.5e-21 77.3 0.0 1.8e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167100|ref|YP_003405378.1| - 9.6e-15 54.6 0.4 1.4e-14 54.2 0.3 1.2 1 0 0 1 1 1 1 KR domain Mannitol_dh PF01232.18 gi|284167100|ref|YP_003405378.1| - 0.036 14.0 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Mannitol dehydrogenase Rossmann domain MoCF_biosynth PF00994.19 gi|284167101|ref|YP_003405379.1| - 4.1e-31 107.3 0.5 1e-30 106.0 0.1 1.7 2 0 0 2 2 2 1 Probable molybdopterin binding domain Rnk_N PF14760.1 gi|284167101|ref|YP_003405379.1| - 0.014 15.4 0.4 0.054 13.5 0.1 2.1 2 0 0 2 2 2 0 Rnk N-terminus PB1 PF00564.19 gi|284167101|ref|YP_003405379.1| - 0.083 12.5 1.3 0.2 11.3 0.1 2.0 2 0 0 2 2 2 0 PB1 domain Lipase_GDSL_2 PF13472.1 gi|284167101|ref|YP_003405379.1| - 0.095 12.8 0.5 0.25 11.4 0.3 1.8 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Oxidored_FMN PF00724.15 gi|284167102|ref|YP_003405380.1| - 4.8e-40 137.5 0.0 6.8e-40 137.0 0.0 1.2 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family HI0933_like PF03486.9 gi|284167102|ref|YP_003405380.1| - 9.4e-08 30.9 0.1 3.9e-07 28.9 0.1 2.0 2 1 1 3 3 3 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|284167102|ref|YP_003405380.1| - 7.3e-07 29.2 1.8 1.2e-05 25.2 1.2 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|284167102|ref|YP_003405380.1| - 8.9e-07 28.8 0.2 4.1e-06 26.7 0.2 2.2 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.2 gi|284167102|ref|YP_003405380.1| - 1.3e-06 27.8 0.8 2.5e-06 26.8 0.6 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|284167102|ref|YP_003405380.1| - 1.6e-06 27.2 1.5 1.6e-06 27.2 1.1 1.7 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.22 gi|284167102|ref|YP_003405380.1| - 2.9e-05 24.3 0.9 8.8e-05 22.8 0.3 2.1 2 1 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|284167102|ref|YP_003405380.1| - 0.0019 18.2 0.5 0.0049 16.9 0.3 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|284167102|ref|YP_003405380.1| - 0.0023 16.9 0.6 0.0023 16.9 0.4 3.0 3 1 1 4 4 4 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|284167102|ref|YP_003405380.1| - 0.0042 15.9 2.6 0.0058 15.5 0.5 2.1 2 1 1 3 3 3 1 Glucose inhibited division protein A 3HCDH_N PF02737.13 gi|284167102|ref|YP_003405380.1| - 0.0098 15.5 0.2 0.016 14.8 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Thi4 PF01946.12 gi|284167102|ref|YP_003405380.1| - 0.03 13.4 0.1 0.051 12.6 0.0 1.3 1 0 0 1 1 1 0 Thi4 family NAD_binding_7 PF13241.1 gi|284167102|ref|YP_003405380.1| - 0.13 12.4 0.1 0.42 10.8 0.1 1.8 2 0 0 2 2 1 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.18 gi|284167102|ref|YP_003405380.1| - 0.16 11.7 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|284167102|ref|YP_003405380.1| - 1 9.3 8.0 0.38 10.7 0.8 3.0 3 1 1 4 4 4 0 NADH(P)-binding adh_short PF00106.20 gi|284167103|ref|YP_003405381.1| - 1.9e-32 112.5 1.7 1.9e-32 112.5 1.2 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167103|ref|YP_003405381.1| - 1.8e-17 63.9 0.0 2.4e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167103|ref|YP_003405381.1| - 3.8e-13 49.4 0.4 3.8e-13 49.4 0.3 1.8 2 0 0 2 2 2 1 KR domain DUF1776 PF08643.5 gi|284167103|ref|YP_003405381.1| - 2.4e-07 30.2 0.0 6.3e-07 28.8 0.0 1.6 2 0 0 2 2 2 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.16 gi|284167103|ref|YP_003405381.1| - 1.1e-05 25.0 0.1 4.2e-05 23.1 0.1 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167103|ref|YP_003405381.1| - 9e-05 22.5 4.5 0.00013 21.9 3.1 1.3 1 0 0 1 1 1 1 NADH(P)-binding RmlD_sub_bind PF04321.12 gi|284167103|ref|YP_003405381.1| - 0.0004 19.3 0.4 0.0011 17.9 0.0 1.9 2 1 0 2 2 2 1 RmlD substrate binding domain 2-Hacid_dh_C PF02826.14 gi|284167103|ref|YP_003405381.1| - 0.016 14.3 0.0 0.21 10.7 0.0 2.2 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N PF00107.21 gi|284167103|ref|YP_003405381.1| - 0.02 14.4 2.6 0.052 13.0 0.2 2.4 2 1 1 3 3 3 0 Zinc-binding dehydrogenase adh_short PF00106.20 gi|284167104|ref|YP_003405382.1| - 1.1e-29 103.4 9.7 1.1e-29 103.4 6.7 1.6 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167104|ref|YP_003405382.1| - 1.1e-22 81.0 0.4 1.3e-22 80.8 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167104|ref|YP_003405382.1| - 3.5e-15 56.1 6.8 3.5e-15 56.1 4.7 1.6 1 1 0 2 2 2 1 KR domain ABM PF03992.11 gi|284167106|ref|YP_003405384.1| - 1.3e-15 57.1 1.3 2e-15 56.5 0.7 1.4 1 1 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Dabb PF07876.7 gi|284167106|ref|YP_003405384.1| - 0.039 14.4 0.6 0.049 14.0 0.4 1.2 1 0 0 1 1 1 0 Stress responsive A/B Barrel Domain PRKCSH-like PF12999.2 gi|284167106|ref|YP_003405384.1| - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like adh_short PF00106.20 gi|284167107|ref|YP_003405385.1| - 1.9e-30 106.0 2.1 2.9e-30 105.3 1.5 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167107|ref|YP_003405385.1| - 1.3e-18 67.6 0.0 1.6e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167107|ref|YP_003405385.1| - 3.1e-14 53.0 1.1 3.1e-14 53.0 0.7 1.6 2 0 0 2 2 2 1 KR domain adh_short PF00106.20 gi|284167108|ref|YP_003405386.1| - 6.1e-32 110.8 0.4 1.3e-31 109.8 0.4 1.4 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167108|ref|YP_003405386.1| - 4.1e-22 79.1 0.0 4.8e-22 78.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167108|ref|YP_003405386.1| - 2.7e-14 53.2 0.3 4.3e-14 52.5 0.2 1.3 1 0 0 1 1 1 1 KR domain adh_short PF00106.20 gi|284167109|ref|YP_003405387.1| - 2.7e-30 105.4 0.5 3.5e-30 105.0 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167109|ref|YP_003405387.1| - 4.6e-20 72.4 0.0 5.4e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167109|ref|YP_003405387.1| - 5.9e-14 52.1 0.3 8.9e-14 51.5 0.2 1.2 1 0 0 1 1 1 1 KR domain Mg_chelatase PF01078.16 gi|284167110|ref|YP_003405388.1| - 2.9e-11 42.9 0.3 7.9e-07 28.4 0.0 2.5 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|284167110|ref|YP_003405388.1| - 1.8e-10 40.7 0.1 3.9e-06 26.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|284167110|ref|YP_003405388.1| - 0.00033 20.2 0.0 0.037 13.6 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|284167110|ref|YP_003405388.1| - 0.0035 16.8 0.0 0.55 9.6 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain MCM PF00493.18 gi|284167110|ref|YP_003405388.1| - 0.0088 14.8 0.0 0.19 10.4 0.0 2.6 2 1 0 2 2 2 1 MCM2/3/5 family DUF815 PF05673.8 gi|284167110|ref|YP_003405388.1| - 0.0097 14.8 0.0 0.034 13.0 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_16 PF13191.1 gi|284167110|ref|YP_003405388.1| - 0.016 15.1 1.8 0.035 14.0 0.0 2.3 1 1 0 2 2 2 0 AAA ATPase domain DPCD PF14913.1 gi|284167110|ref|YP_003405388.1| - 0.07 12.2 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 DPCD protein family AAA_22 PF13401.1 gi|284167110|ref|YP_003405388.1| - 0.079 13.1 0.0 0.36 10.9 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|284167110|ref|YP_003405388.1| - 0.099 12.2 0.9 0.87 9.1 0.3 2.6 2 1 0 2 2 2 0 AAA domain AAA PF00004.24 gi|284167110|ref|YP_003405388.1| - 0.1 12.8 0.0 0.79 9.9 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PSK_trans_fac PF07704.6 gi|284167110|ref|YP_003405388.1| - 8 7.2 9.2 1.2 9.8 1.7 2.6 2 0 0 2 2 2 0 Rv0623-like transcription factor VWA_2 PF13519.1 gi|284167111|ref|YP_003405389.1| - 5.2e-15 55.9 0.1 1.8e-14 54.2 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.9 gi|284167111|ref|YP_003405389.1| - 1.9e-10 40.6 0.1 5.1e-06 26.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) VWA PF00092.23 gi|284167111|ref|YP_003405389.1| - 2.3e-10 40.5 0.0 3.6e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.16 gi|284167111|ref|YP_003405389.1| - 3e-10 39.6 1.2 1.4e-06 27.6 0.0 3.0 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI MCM PF00493.18 gi|284167111|ref|YP_003405389.1| - 4e-08 32.4 1.3 1.2e-06 27.5 0.9 2.6 2 1 0 2 2 2 1 MCM2/3/5 family VWA_3 PF13768.1 gi|284167111|ref|YP_003405389.1| - 1.4e-07 31.3 0.0 5.3e-07 29.4 0.0 2.0 2 0 0 2 2 2 1 von Willebrand factor type A domain AAA_16 PF13191.1 gi|284167111|ref|YP_003405389.1| - 9.2e-05 22.5 4.1 0.00022 21.2 0.0 2.9 3 0 0 3 3 3 1 AAA ATPase domain AAA_3 PF07726.6 gi|284167111|ref|YP_003405389.1| - 0.00072 19.1 0.0 0.031 13.8 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase_2 PF13335.1 gi|284167111|ref|YP_003405389.1| - 0.0012 19.1 4.2 0.0053 17.1 2.9 2.2 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|284167111|ref|YP_003405389.1| - 0.0046 16.4 0.0 0.85 9.0 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_22 PF13401.1 gi|284167111|ref|YP_003405389.1| - 0.0061 16.7 0.0 0.028 14.5 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA PF00004.24 gi|284167111|ref|YP_003405389.1| - 0.039 14.1 0.0 0.47 10.6 0.0 2.6 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Oxidored_FMN PF00724.15 gi|284167112|ref|YP_003405390.1| - 3.8e-62 210.2 0.0 5.2e-62 209.8 0.0 1.2 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.9 gi|284167112|ref|YP_003405390.1| - 6.7e-12 45.6 0.0 9.9e-10 38.6 0.0 2.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|284167112|ref|YP_003405390.1| - 7.6e-09 35.4 0.2 4.4e-07 29.8 0.1 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.2 gi|284167112|ref|YP_003405390.1| - 1.4e-07 30.9 1.7 9.1e-07 28.2 0.3 2.5 2 1 1 3 3 3 1 FAD dependent oxidoreductase Pyr_redox PF00070.22 gi|284167112|ref|YP_003405390.1| - 2.5e-07 30.9 0.6 3.3e-05 24.2 0.3 3.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|284167112|ref|YP_003405390.1| - 2.8e-07 29.8 5.3 3.9e-05 22.7 0.2 4.0 3 1 1 4 4 4 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|284167112|ref|YP_003405390.1| - 5.6e-07 28.7 0.2 1.2e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|284167112|ref|YP_003405390.1| - 1.3e-05 23.8 0.1 7.6e-05 21.3 0.0 2.2 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.1 gi|284167112|ref|YP_003405390.1| - 0.00029 20.9 0.6 0.0026 17.8 0.0 2.2 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|284167112|ref|YP_003405390.1| - 0.001 18.0 0.1 0.003 16.5 0.1 1.7 1 1 1 2 2 2 1 Glucose inhibited division protein A NAD_binding_7 PF13241.1 gi|284167112|ref|YP_003405390.1| - 0.021 15.0 0.0 0.06 13.6 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding Thi4 PF01946.12 gi|284167112|ref|YP_003405390.1| - 0.033 13.2 0.0 0.068 12.2 0.0 1.5 1 0 0 1 1 1 0 Thi4 family 3HCDH_N PF02737.13 gi|284167112|ref|YP_003405390.1| - 0.11 12.1 0.1 2.1 7.9 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_trans_4_4 PF13579.1 gi|284167112|ref|YP_003405390.1| - 0.58 10.2 4.7 0.19 11.8 0.3 2.5 3 1 0 3 3 3 0 Glycosyl transferase 4-like domain ETF_alpha PF00766.14 gi|284167113|ref|YP_003405391.1| - 1e-23 82.7 0.0 2.8e-23 81.3 0.0 1.7 2 0 0 2 2 2 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.16 gi|284167113|ref|YP_003405391.1| - 8.5e-10 38.5 0.8 2.5e-09 37.0 0.0 2.0 2 0 0 2 2 2 1 Electron transfer flavoprotein domain DAO PF01266.19 gi|284167114|ref|YP_003405392.1| - 2.6e-16 59.4 2.6 1.4e-08 34.0 0.0 2.4 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|284167114|ref|YP_003405392.1| - 1.9e-13 50.2 3.5 1.9e-13 50.2 2.4 2.2 2 1 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 gi|284167114|ref|YP_003405392.1| - 4.1e-08 32.6 0.1 8.7e-08 31.5 0.1 1.5 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.2 gi|284167114|ref|YP_003405392.1| - 7.1e-08 31.9 0.7 1.2e-07 31.2 0.5 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|284167114|ref|YP_003405392.1| - 5.4e-07 28.8 0.2 1.3e-06 27.6 0.2 1.5 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_binding_2 PF00890.19 gi|284167114|ref|YP_003405392.1| - 9.2e-07 28.0 1.8 9.2e-07 28.0 1.2 2.2 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.9 gi|284167114|ref|YP_003405392.1| - 1.5e-06 26.9 2.8 4e-05 22.2 0.7 2.2 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|284167114|ref|YP_003405392.1| - 3.3e-06 27.1 6.0 6.8e-06 26.0 4.2 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|284167114|ref|YP_003405392.1| - 4.2e-06 26.7 0.2 4.2e-06 26.7 0.2 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|284167114|ref|YP_003405392.1| - 7.4e-06 25.0 3.2 1.3e-05 24.3 0.6 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.1 gi|284167114|ref|YP_003405392.1| - 1.2e-05 25.4 1.1 0.00025 21.1 0.2 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|284167114|ref|YP_003405392.1| - 2.4e-05 24.6 1.9 0.0027 18.0 0.2 2.9 1 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|284167114|ref|YP_003405392.1| - 0.0003 20.5 0.3 0.2 11.4 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding Trp_halogenase PF04820.9 gi|284167114|ref|YP_003405392.1| - 0.0011 17.6 1.3 0.076 11.6 0.1 2.1 2 0 0 2 2 2 2 Tryptophan halogenase ApbA PF02558.11 gi|284167114|ref|YP_003405392.1| - 0.0037 16.7 1.1 0.014 14.8 0.2 2.1 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.13 gi|284167114|ref|YP_003405392.1| - 0.02 14.5 0.6 0.032 13.8 0.4 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|284167114|ref|YP_003405392.1| - 0.061 13.4 0.1 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 gi|284167114|ref|YP_003405392.1| - 0.11 12.8 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.18 gi|284167114|ref|YP_003405392.1| - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Fer4_21 PF14697.1 gi|284167115|ref|YP_003405393.1| - 9.9e-08 31.7 7.7 0.0022 17.7 1.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|284167115|ref|YP_003405393.1| - 1.7e-06 27.7 22.0 5.1e-05 22.9 9.2 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|284167115|ref|YP_003405393.1| - 1.7e-05 25.1 11.9 0.0066 16.8 9.8 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|284167115|ref|YP_003405393.1| - 0.00013 21.7 12.6 0.0089 15.9 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|284167115|ref|YP_003405393.1| - 0.0022 17.9 7.2 0.015 15.3 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|284167115|ref|YP_003405393.1| - 0.0023 17.7 15.5 0.029 14.2 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|284167115|ref|YP_003405393.1| - 0.0056 16.5 8.0 0.0082 16.0 5.5 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|284167115|ref|YP_003405393.1| - 0.0094 16.1 14.6 0.054 13.7 10.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|284167115|ref|YP_003405393.1| - 0.03 14.6 2.7 0.03 14.6 1.9 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.22 gi|284167115|ref|YP_003405393.1| - 0.039 13.5 3.6 0.039 13.5 2.5 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|284167115|ref|YP_003405393.1| - 0.11 12.8 12.0 1.7 9.0 1.9 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain YokU PF14122.1 gi|284167115|ref|YP_003405393.1| - 3.1 7.5 6.6 9.2 6.0 2.6 2.4 1 1 2 3 3 3 0 YokU-like protein Fer4_20 PF14691.1 gi|284167115|ref|YP_003405393.1| - 3.2 7.3 8.7 8.5 6.0 6.1 1.7 1 1 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_15 PF13459.1 gi|284167115|ref|YP_003405393.1| - 5.2 7.7 15.7 0.17 12.4 2.7 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|284167115|ref|YP_003405393.1| - 5.5 7.4 17.8 3.7 8.0 4.0 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain ETF PF01012.16 gi|284167116|ref|YP_003405394.1| - 5.5e-21 74.9 3.1 7.6e-21 74.5 2.1 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Glyco_tranf_2_3 PF13641.1 gi|284167117|ref|YP_003405395.1| - 4.1e-28 98.7 2.2 1.1e-27 97.3 1.5 1.7 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.21 gi|284167117|ref|YP_003405395.1| - 5.1e-28 97.8 0.0 8.6e-28 97.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Methyltransf_21 PF05050.7 gi|284167117|ref|YP_003405395.1| - 3.4e-26 92.1 0.0 7.7e-26 91.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase FkbM domain Glyco_trans_2_3 PF13632.1 gi|284167117|ref|YP_003405395.1| - 6.7e-13 48.7 0.0 1.7e-12 47.4 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 gi|284167117|ref|YP_003405395.1| - 7.9e-09 34.9 0.0 1.3e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 V_cholerae_RfbT PF05575.6 gi|284167117|ref|YP_003405395.1| - 9.8e-07 28.1 0.0 1.6e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Vibrio cholerae RfbT protein Met_10 PF02475.11 gi|284167117|ref|YP_003405395.1| - 1.1e-05 25.1 0.0 1.9e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|284167117|ref|YP_003405395.1| - 1.6e-05 25.4 4.7 1.8e-05 25.2 0.9 2.9 3 2 1 4 4 4 1 Methyltransferase domain Glyco_transf_21 PF13506.1 gi|284167117|ref|YP_003405395.1| - 7.6e-05 22.0 0.0 0.00028 20.2 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 21 AAA_19 PF13245.1 gi|284167117|ref|YP_003405395.1| - 0.00061 19.4 2.6 0.052 13.3 0.5 3.3 2 0 0 2 2 2 1 Part of AAA domain PCMT PF01135.14 gi|284167117|ref|YP_003405395.1| - 0.036 13.6 0.0 0.08 12.4 0.0 1.5 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Fst_toxin PF13955.1 gi|284167117|ref|YP_003405395.1| - 0.82 9.4 4.5 2.9 7.6 3.2 2.0 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system Radical_SAM PF04055.16 gi|284167118|ref|YP_003405396.1| - 3.7e-21 76.0 0.0 5.3e-21 75.4 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|284167118|ref|YP_003405396.1| - 2.6e-09 37.3 0.0 4.1e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|284167118|ref|YP_003405396.1| - 1.6e-07 31.3 0.0 2.7e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|284167118|ref|YP_003405396.1| - 5.4e-05 23.4 0.1 0.00013 22.2 0.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Creatininase PF02633.9 gi|284167121|ref|YP_003405399.1| - 1.8e-66 223.6 0.2 2e-66 223.4 0.2 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase Hepar_II_III PF07940.8 gi|284167122|ref|YP_003405400.1| - 3.8e-16 59.1 0.1 9.5e-16 57.8 0.1 1.6 1 0 0 1 1 1 1 Heparinase II/III-like protein AP_endonuc_2 PF01261.19 gi|284167123|ref|YP_003405401.1| - 2.5e-28 98.8 3.1 3.7e-28 98.2 2.2 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.7 gi|284167123|ref|YP_003405401.1| - 0.0004 19.8 0.1 0.0017 17.8 0.1 2.0 2 0 0 2 2 2 1 AP endonuclease family 2 C terminus UxuA PF03786.8 gi|284167123|ref|YP_003405401.1| - 0.032 12.7 0.0 0.047 12.2 0.0 1.4 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) 2-Hacid_dh_C PF02826.14 gi|284167124|ref|YP_003405402.1| - 5.9e-45 152.6 0.0 8.9e-45 152.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|284167124|ref|YP_003405402.1| - 1.1e-10 41.0 0.0 2.1e-10 40.1 0.0 1.5 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 gi|284167124|ref|YP_003405402.1| - 0.0026 17.5 0.0 0.0049 16.7 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_C PF03720.10 gi|284167124|ref|YP_003405402.1| - 0.034 14.3 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DUF718 PF05336.8 gi|284167125|ref|YP_003405403.1| - 4.8e-13 48.8 0.2 5.7e-13 48.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF718) Bac_luciferase PF00296.15 gi|284167126|ref|YP_003405404.1| - 3.5e-68 229.9 0.0 4.2e-68 229.7 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase MR_MLE_C PF13378.1 gi|284167127|ref|YP_003405405.1| - 4.8e-22 78.0 0.0 1.3e-21 76.6 0.0 1.7 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE_N PF02746.11 gi|284167127|ref|YP_003405405.1| - 1.9e-19 69.8 0.1 3.4e-19 68.9 0.1 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE PF01188.16 gi|284167127|ref|YP_003405405.1| - 4.7e-18 65.4 0.1 8.9e-18 64.5 0.1 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ADH_N PF08240.7 gi|284167128|ref|YP_003405406.1| - 2.4e-32 110.9 0.9 5.5e-32 109.7 0.6 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|284167128|ref|YP_003405406.1| - 1.1e-17 63.7 0.1 1.7e-17 63.1 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|284167128|ref|YP_003405406.1| - 2.7e-06 28.2 0.0 5.1e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Gp_dh_N PF00044.19 gi|284167128|ref|YP_003405406.1| - 0.13 12.1 0.1 0.28 11.1 0.0 1.6 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Glyco_hydro_97 PF10566.4 gi|284167129|ref|YP_003405407.1| - 1.7e-80 270.0 0.8 2.1e-80 269.7 0.6 1.1 1 0 0 1 1 1 1 Glycoside hydrolase 97 GH97_N PF14508.1 gi|284167129|ref|YP_003405407.1| - 1.7e-48 164.8 0.0 3.8e-48 163.7 0.0 1.5 2 0 0 2 2 2 1 Glycosyl-hydrolase 97 N-terminal GH97_C PF14509.1 gi|284167129|ref|YP_003405407.1| - 4e-20 71.8 0.0 2.3e-19 69.4 0.0 2.2 2 0 0 2 2 2 1 Glycosyl-hydrolase 97 C-terminal, oligomerisation Amidohydro_2 PF04909.9 gi|284167130|ref|YP_003405408.1| - 1.1e-19 71.1 8.5 1.4e-19 70.7 5.9 1.1 1 0 0 1 1 1 1 Amidohydrolase FAA_hydrolase PF01557.13 gi|284167131|ref|YP_003405409.1| - 4.4e-69 232.2 0.3 5.6e-69 231.9 0.2 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.4 gi|284167131|ref|YP_003405409.1| - 0.03 14.7 0.1 0.078 13.3 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF2437) DUF162 PF02589.10 gi|284167132|ref|YP_003405410.1| - 6e-43 146.5 0.5 1.1e-42 145.7 0.4 1.4 1 0 0 1 1 1 1 Uncharacterised ACR, YkgG family COG1556 Fer4_8 PF13183.1 gi|284167132|ref|YP_003405410.1| - 7.5e-10 38.6 5.2 1.5e-09 37.6 3.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|284167132|ref|YP_003405410.1| - 7.9e-08 32.6 5.8 4.1e-05 23.9 0.6 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|284167132|ref|YP_003405410.1| - 2.1e-07 31.1 4.0 4.4e-07 30.1 2.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|284167132|ref|YP_003405410.1| - 5e-06 26.7 6.8 1.1e-05 25.7 4.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|284167132|ref|YP_003405410.1| - 3.1e-05 23.6 9.8 0.0015 18.3 7.9 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|284167132|ref|YP_003405410.1| - 3.7e-05 23.9 9.7 0.0005 20.2 7.1 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|284167132|ref|YP_003405410.1| - 4.4e-05 23.2 8.0 0.00026 20.7 5.6 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|284167132|ref|YP_003405410.1| - 5.4e-05 22.6 13.5 0.00092 18.7 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|284167132|ref|YP_003405410.1| - 0.0009 19.0 11.3 0.056 13.3 1.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|284167132|ref|YP_003405410.1| - 0.0014 18.4 12.4 0.0081 15.9 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|284167132|ref|YP_003405410.1| - 0.0082 16.4 15.0 0.095 13.0 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain DUF460 PF04312.8 gi|284167132|ref|YP_003405410.1| - 0.027 14.0 0.0 0.063 12.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF460) Fer4_20 PF14691.1 gi|284167132|ref|YP_003405410.1| - 0.034 13.7 2.5 0.044 13.4 0.1 2.2 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.2 gi|284167132|ref|YP_003405410.1| - 0.051 14.1 17.0 0.12 13.0 3.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|284167132|ref|YP_003405410.1| - 0.49 11.1 10.6 2.6 8.8 7.4 2.2 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain ScpA_ScpB PF02616.9 gi|284167132|ref|YP_003405410.1| - 1.4 8.4 3.0 2.4 7.6 2.1 1.3 1 0 0 1 1 1 0 ScpA/B protein Fer4_15 PF13459.1 gi|284167132|ref|YP_003405410.1| - 1.8 9.2 7.8 1.4 9.5 0.2 3.4 3 0 0 3 3 2 0 4Fe-4S single cluster domain DUF162 PF02589.10 gi|284167133|ref|YP_003405411.1| - 6.5e-24 84.4 0.1 1.3e-23 83.5 0.0 1.5 1 1 0 1 1 1 1 Uncharacterised ACR, YkgG family COG1556 IclR PF01614.13 gi|284167134|ref|YP_003405412.1| - 2.9e-39 133.6 0.0 4.3e-39 133.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167134|ref|YP_003405412.1| - 1.4e-10 40.6 0.2 1.2e-09 37.6 0.1 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|284167134|ref|YP_003405412.1| - 1.4e-06 27.9 0.1 3.1e-06 26.8 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|284167134|ref|YP_003405412.1| - 4.6e-06 26.2 0.0 1.5e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 gi|284167134|ref|YP_003405412.1| - 9.8e-06 25.1 0.1 0.00012 21.6 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|284167134|ref|YP_003405412.1| - 1.7e-05 24.4 0.1 4e-05 23.1 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|284167134|ref|YP_003405412.1| - 6.2e-05 22.6 0.3 0.0002 20.9 0.0 2.0 3 0 0 3 3 3 1 MarR family HTH_24 PF13412.1 gi|284167134|ref|YP_003405412.1| - 6.9e-05 22.1 0.0 0.00013 21.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.14 gi|284167134|ref|YP_003405412.1| - 0.0035 17.2 0.0 0.0079 16.1 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.7 gi|284167134|ref|YP_003405412.1| - 0.0095 15.5 0.0 0.038 13.6 0.0 2.0 2 0 0 2 2 2 1 HTH domain HTH_34 PF13601.1 gi|284167134|ref|YP_003405412.1| - 0.024 14.6 0.0 0.074 13.1 0.0 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_40 PF14493.1 gi|284167134|ref|YP_003405412.1| - 0.026 14.7 0.1 0.083 13.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|284167134|ref|YP_003405412.1| - 0.05 13.7 0.1 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator HTH_10 PF04967.7 gi|284167134|ref|YP_003405412.1| - 0.057 13.0 0.1 0.15 11.6 0.0 1.7 2 0 0 2 2 2 0 HTH DNA binding domain HTH_38 PF13936.1 gi|284167134|ref|YP_003405412.1| - 0.063 12.8 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|284167134|ref|YP_003405412.1| - 0.097 13.0 0.2 0.41 11.0 0.0 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain Phage_CI_repr PF07022.8 gi|284167134|ref|YP_003405412.1| - 0.1 12.6 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|284167134|ref|YP_003405412.1| - 0.13 12.0 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC FA_desaturase PF00487.19 gi|284167135|ref|YP_003405413.1| - 0.00049 19.6 0.2 0.00051 19.5 0.1 1.0 1 0 0 1 1 1 1 Fatty acid desaturase UPF0104 PF03706.8 gi|284167135|ref|YP_003405413.1| - 0.0036 16.6 0.7 0.0041 16.4 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) DUF2244 PF10003.4 gi|284167135|ref|YP_003405413.1| - 0.35 10.2 2.1 0.4 10.0 1.5 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2892 PF11127.3 gi|284167135|ref|YP_003405413.1| - 2 8.2 6.6 2.6 7.9 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) ABC_tran PF00005.22 gi|284167136|ref|YP_003405414.1| - 1.1e-26 93.7 0.0 1.6e-26 93.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|284167136|ref|YP_003405414.1| - 2.7e-15 56.4 0.2 5.2e-15 55.5 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|284167136|ref|YP_003405414.1| - 0.00011 22.2 0.8 0.083 12.8 0.1 2.2 1 1 1 2 2 2 2 AAA domain DUF258 PF03193.11 gi|284167136|ref|YP_003405414.1| - 0.0032 16.6 0.2 0.0053 15.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|284167136|ref|YP_003405414.1| - 0.011 15.9 1.3 0.073 13.2 0.9 2.2 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|284167136|ref|YP_003405414.1| - 0.011 15.7 0.1 0.023 14.7 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.1 gi|284167136|ref|YP_003405414.1| - 0.018 14.5 0.1 0.037 13.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|284167136|ref|YP_003405414.1| - 0.17 11.7 1.0 4.4 7.2 0.7 2.7 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC_tran PF00005.22 gi|284167137|ref|YP_003405415.1| - 3e-21 76.1 0.0 4.3e-21 75.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|284167137|ref|YP_003405415.1| - 8.8e-18 64.4 0.1 2.2e-17 63.1 0.1 1.7 2 0 0 2 2 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|284167137|ref|YP_003405415.1| - 7.6e-11 42.5 4.1 2.9e-10 40.5 0.2 2.1 1 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|284167137|ref|YP_003405415.1| - 0.00017 20.9 0.3 0.019 14.2 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.4 gi|284167137|ref|YP_003405415.1| - 0.0005 18.7 0.1 0.0012 17.5 0.0 1.5 1 1 0 1 1 1 1 Predicted ATPase of the ABC class AAA_22 PF13401.1 gi|284167137|ref|YP_003405415.1| - 0.00051 20.1 1.2 0.012 15.6 0.8 2.3 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|284167137|ref|YP_003405415.1| - 0.0018 17.6 0.0 0.012 15.0 0.0 2.2 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|284167137|ref|YP_003405415.1| - 0.002 17.5 0.1 0.07 12.5 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_10 PF12846.2 gi|284167137|ref|YP_003405415.1| - 0.0049 16.3 0.0 0.025 14.0 0.0 1.9 1 1 1 2 2 2 1 AAA-like domain DUF87 PF01935.12 gi|284167137|ref|YP_003405415.1| - 0.0091 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_16 PF13191.1 gi|284167137|ref|YP_003405415.1| - 0.016 15.1 0.5 0.036 14.0 0.3 1.8 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.7 gi|284167137|ref|YP_003405415.1| - 0.021 14.4 0.1 0.063 12.9 0.0 1.8 2 0 0 2 2 2 0 NACHT domain Mg_chelatase PF01078.16 gi|284167137|ref|YP_003405415.1| - 0.029 13.5 0.0 0.061 12.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.1 gi|284167137|ref|YP_003405415.1| - 0.031 13.8 0.0 0.06 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain KaiC PF06745.8 gi|284167137|ref|YP_003405415.1| - 0.086 11.9 0.1 0.23 10.5 0.0 1.6 2 0 0 2 2 2 0 KaiC MobB PF03205.9 gi|284167137|ref|YP_003405415.1| - 0.15 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B BPD_transp_1 PF00528.17 gi|284167138|ref|YP_003405416.1| - 1.2e-19 70.6 12.0 1.2e-19 70.6 8.3 2.0 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|284167138|ref|YP_003405416.1| - 0.65 9.4 5.9 0.65 9.4 0.0 3.0 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.17 gi|284167139|ref|YP_003405417.1| - 2e-28 99.1 13.2 2e-28 99.1 9.1 2.1 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.17 gi|284167140|ref|YP_003405418.1| - 1.8e-25 89.5 4.9 2.6e-25 89.0 3.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.4 gi|284167140|ref|YP_003405418.1| - 0.045 13.7 3.6 0.09 12.8 2.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence SBP_bac_5 PF00496.17 gi|284167141|ref|YP_003405419.1| - 3e-22 78.9 6.6 4.8e-22 78.2 4.6 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.4 gi|284167141|ref|YP_003405419.1| - 0.001 18.8 1.6 0.0023 17.7 1.1 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence YjgP_YjgQ PF03739.9 gi|284167142|ref|YP_003405420.1| - 0.0035 16.1 0.9 0.0038 16.0 0.7 1.0 1 0 0 1 1 1 1 Predicted permease YjgP/YjgQ family ABC2_membrane_3 PF12698.2 gi|284167142|ref|YP_003405420.1| - 4.1 6.3 7.4 5.1 6.0 5.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein FG-GAP PF01839.18 gi|284167143|ref|YP_003405421.1| - 4.2e-10 39.0 25.3 0.002 17.7 2.6 5.0 5 0 0 5 5 5 3 FG-GAP repeat VCBS PF13517.1 gi|284167143|ref|YP_003405421.1| - 2.2e-09 37.5 7.7 0.04 14.2 0.1 4.9 5 0 0 5 5 5 3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella TcdB_toxin_midN PF12256.3 gi|284167143|ref|YP_003405421.1| - 7e-06 25.6 2.8 0.55 9.6 0.1 3.3 3 0 0 3 3 3 3 Insecticide toxin TcdB middle/N-terminal region EF-hand_5 PF13202.1 gi|284167143|ref|YP_003405421.1| - 0.25 10.7 7.5 7.6 6.0 0.1 3.6 3 0 0 3 3 3 0 EF hand EF-hand_1 PF00036.27 gi|284167143|ref|YP_003405421.1| - 0.51 9.7 4.2 11 5.6 0.0 3.6 3 0 0 3 3 3 0 EF hand FG-GAP PF01839.18 gi|284167144|ref|YP_003405422.1| - 5.5e-15 54.5 12.0 0.0003 20.3 0.6 4.8 4 0 0 4 4 4 4 FG-GAP repeat VCBS PF13517.1 gi|284167144|ref|YP_003405422.1| - 1.8e-07 31.4 16.2 0.038 14.3 0.4 4.9 5 0 0 5 5 5 3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella TcdB_toxin_midN PF12256.3 gi|284167144|ref|YP_003405422.1| - 5e-05 22.8 3.5 1.1 8.7 0.0 3.3 3 0 0 3 3 3 3 Insecticide toxin TcdB middle/N-terminal region EF-hand_5 PF13202.1 gi|284167144|ref|YP_003405422.1| - 0.27 10.6 7.9 13 5.3 0.6 3.7 3 0 0 3 3 3 0 EF hand EF-hand_1 PF00036.27 gi|284167144|ref|YP_003405422.1| - 0.75 9.2 4.6 14 5.2 0.1 3.6 3 0 0 3 3 3 0 EF hand Glyco_hydro_42 PF02449.10 gi|284167145|ref|YP_003405423.1| - 2.4e-149 497.5 5.3 2.4e-149 497.5 3.7 1.6 2 0 0 2 2 2 1 Beta-galactosidase Glyco_hydro_42M PF08532.5 gi|284167145|ref|YP_003405423.1| - 4.6e-58 195.7 0.0 6.6e-58 195.2 0.0 1.2 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain Cellulase PF00150.13 gi|284167145|ref|YP_003405423.1| - 8.9e-09 34.9 0.0 1.6e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Glyco_hydro_35 PF01301.14 gi|284167145|ref|YP_003405423.1| - 5.4e-06 25.9 0.2 2.2e-05 23.9 0.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 35 Glyco_hydro_14 PF01373.12 gi|284167145|ref|YP_003405423.1| - 1.5e-05 23.9 0.0 0.0001 21.2 0.0 2.0 2 0 0 2 2 2 1 Glycosyl hydrolase family 14 Glyco_hydro_42C PF08533.5 gi|284167145|ref|YP_003405423.1| - 0.0029 17.0 0.0 0.0091 15.4 0.0 1.9 1 0 0 1 1 1 1 Beta-galactosidase C-terminal domain DUF4350 PF14258.1 gi|284167145|ref|YP_003405423.1| - 0.058 13.5 0.1 0.2 11.9 0.0 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) DUF4434 PF14488.1 gi|284167145|ref|YP_003405423.1| - 0.12 12.1 1.1 0.95 9.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) Usp PF00582.21 gi|284167146|ref|YP_003405424.1| - 6.4e-14 52.3 0.3 1.1e-13 51.5 0.2 1.4 1 1 0 1 1 1 1 Universal stress protein family Fe-ADH PF00465.14 gi|284167146|ref|YP_003405424.1| - 0.038 12.6 0.1 1.2 7.6 0.0 2.0 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase DUF2680 PF10925.3 gi|284167146|ref|YP_003405424.1| - 0.079 12.8 0.1 0.52 10.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) AP_endonuc_2 PF01261.19 gi|284167146|ref|YP_003405424.1| - 0.1 11.8 0.4 0.59 9.3 0.3 1.9 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel MR_MLE_C PF13378.1 gi|284167147|ref|YP_003405425.1| - 3.8e-36 123.4 0.0 8.2e-36 122.3 0.0 1.6 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.11 gi|284167147|ref|YP_003405425.1| - 3e-27 94.9 0.0 5.7e-27 94.0 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE PF01188.16 gi|284167147|ref|YP_003405425.1| - 5.5e-15 55.6 0.0 1.7e-14 54.0 0.0 1.9 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Glyco_hydro_4 PF02056.11 gi|284167148|ref|YP_003405426.1| - 2.2e-52 177.0 0.0 4.1e-52 176.1 0.0 1.4 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase Glyco_hydro_4C PF11975.3 gi|284167148|ref|YP_003405426.1| - 5e-33 114.8 0.0 6.8e-33 114.3 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Glyco_hydro_2_N PF02837.13 gi|284167149|ref|YP_003405427.1| - 4.6e-22 78.3 0.0 8.8e-22 77.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Glyco_hydro_2_C PF02836.12 gi|284167149|ref|YP_003405427.1| - 3e-06 26.3 0.0 4.4e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Glyco_hydro_2 PF00703.16 gi|284167149|ref|YP_003405427.1| - 0.0044 17.4 0.0 0.012 16.0 0.0 1.8 1 0 0 1 1 1 1 Glycosyl hydrolases family 2 DUF4434 PF14488.1 gi|284167149|ref|YP_003405427.1| - 0.021 14.5 0.1 0.045 13.4 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) Beta_helix PF13229.1 gi|284167150|ref|YP_003405428.1| - 1.4e-14 54.0 28.3 7.6e-10 38.7 9.3 2.6 1 1 1 2 2 2 2 Right handed beta helix region UCR_Fe-S_N PF10399.4 gi|284167150|ref|YP_003405428.1| - 0.13 11.4 0.8 0.24 10.6 0.5 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Lipase_GDSL_3 PF14606.1 gi|284167151|ref|YP_003405429.1| - 4e-24 85.3 0.0 5.3e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL_2 PF13472.1 gi|284167151|ref|YP_003405429.1| - 2e-13 50.8 0.1 2.7e-13 50.4 0.1 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Bac_rhamnosid PF05592.6 gi|284167152|ref|YP_003405430.1| - 2e-67 227.6 0.0 2.6e-67 227.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase Bac_rhamnosid_N PF08531.5 gi|284167152|ref|YP_003405430.1| - 2.8e-27 95.3 0.0 7e-27 94.0 0.0 1.7 1 0 0 1 1 1 1 Alpha-L-rhamnosidase N-terminal domain DUF608 PF04685.8 gi|284167152|ref|YP_003405430.1| - 2.2e-06 26.6 0.0 3.5e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF608 Oxygenase-NA PF09859.4 gi|284167152|ref|YP_003405430.1| - 0.018 14.3 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA RicinB_lectin_2 PF14200.1 gi|284167153|ref|YP_003405431.1| - 6e-17 61.9 0.3 6.2e-15 55.4 0.0 2.8 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like Beta_helix PF13229.1 gi|284167153|ref|YP_003405431.1| - 7.8e-08 32.2 14.4 3.1e-05 23.7 10.4 2.7 1 1 1 2 2 2 2 Right handed beta helix region Ricin_B_lectin PF00652.17 gi|284167153|ref|YP_003405431.1| - 4.5e-05 23.4 0.0 0.086 12.8 0.0 3.4 3 0 0 3 3 3 1 Ricin-type beta-trefoil lectin domain NosD PF05048.8 gi|284167153|ref|YP_003405431.1| - 0.0092 15.1 1.1 0.023 13.8 0.8 1.7 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Pectate_lyase22 PF14583.1 gi|284167154|ref|YP_003405432.1| - 6.4e-27 94.0 0.1 4.4e-25 87.9 0.1 2.0 1 1 0 1 1 1 1 Oligogalacturonate lyase PD40 PF07676.7 gi|284167154|ref|YP_003405432.1| - 4.2e-06 26.3 2.7 0.015 14.9 0.0 3.1 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat DUF2264 PF10022.4 gi|284167155|ref|YP_003405433.1| - 7.6e-126 419.5 0.0 9.1e-126 419.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2264) Acyl-CoA_dh_N PF02771.11 gi|284167155|ref|YP_003405433.1| - 0.11 13.0 0.3 0.83 10.2 0.2 2.4 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, N-terminal domain Glyco_hydro_2_C PF02836.12 gi|284167156|ref|YP_003405434.1| - 1.3e-106 355.8 0.0 1.8e-106 355.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Bgal_small_N PF02929.12 gi|284167156|ref|YP_003405434.1| - 1.9e-74 250.1 0.0 3.4e-74 249.3 0.0 1.4 1 0 0 1 1 1 1 Beta galactosidase small chain Glyco_hydro_2_N PF02837.13 gi|284167156|ref|YP_003405434.1| - 5.8e-58 195.1 0.1 9.6e-58 194.4 0.1 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Glyco_hydro_2 PF00703.16 gi|284167156|ref|YP_003405434.1| - 3.3e-14 53.2 0.1 8.8e-14 51.8 0.1 1.8 1 0 0 1 1 1 1 Glycosyl hydrolases family 2 Bac_rhamnosid_N PF08531.5 gi|284167156|ref|YP_003405434.1| - 0.028 13.9 0.3 0.25 10.8 0.0 2.5 2 1 0 2 2 2 0 Alpha-L-rhamnosidase N-terminal domain LEA_2 PF03168.8 gi|284167156|ref|YP_003405434.1| - 0.03 14.7 0.0 0.13 12.6 0.0 2.2 1 0 0 1 1 1 0 Late embryogenesis abundant protein Glyco_hydro_42 PF02449.10 gi|284167156|ref|YP_003405434.1| - 0.081 12.0 0.1 7.1 5.6 0.0 2.3 2 0 0 2 2 2 0 Beta-galactosidase Fn3-like PF14310.1 gi|284167156|ref|YP_003405434.1| - 0.082 12.8 1.1 11 5.9 0.0 3.1 3 0 0 3 3 3 0 Fibronectin type III-like domain Glyco_hydro_72 PF03198.9 gi|284167156|ref|YP_003405434.1| - 0.14 11.1 0.0 0.25 10.3 0.0 1.3 1 0 0 1 1 1 0 Glucanosyltransferase Glyco_hydro_67N PF03648.9 gi|284167157|ref|YP_003405435.1| - 0.0018 18.3 0.0 0.0038 17.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolase family 67 N-terminus DUF3812 PF12757.2 gi|284167157|ref|YP_003405435.1| - 0.058 13.3 0.4 0.13 12.2 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3812) RicinB_lectin_2 PF14200.1 gi|284167158|ref|YP_003405436.1| - 1.7e-26 92.6 0.0 1.6e-15 57.3 0.0 3.0 2 1 2 4 4 4 3 Ricin-type beta-trefoil lectin domain-like Ricin_B_lectin PF00652.17 gi|284167158|ref|YP_003405436.1| - 5.6e-07 29.6 0.0 1.8e-06 28.0 0.0 1.8 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Beta_helix PF13229.1 gi|284167158|ref|YP_003405436.1| - 0.00063 19.5 16.7 0.015 15.0 10.5 3.1 2 1 1 3 3 3 1 Right handed beta helix region NosD PF05048.8 gi|284167158|ref|YP_003405436.1| - 0.6 9.2 6.7 1.3 8.0 4.5 1.7 1 1 0 1 1 1 0 Periplasmic copper-binding protein (NosD) UxuA PF03786.8 gi|284167159|ref|YP_003405437.1| - 8.5e-50 169.2 0.0 3.9e-47 160.5 0.0 2.0 1 1 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.19 gi|284167159|ref|YP_003405437.1| - 2.6e-10 39.9 0.0 8.2e-10 38.3 0.0 1.6 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Glyco_hydro_2_C PF02836.12 gi|284167160|ref|YP_003405438.1| - 1.4e-51 175.2 0.3 2.4e-43 148.1 0.1 2.8 2 1 0 2 2 2 2 Glycosyl hydrolases family 2, TIM barrel domain Bgal_small_N PF02929.12 gi|284167160|ref|YP_003405438.1| - 2.6e-51 174.2 0.0 2.4e-39 135.0 0.1 2.3 2 0 0 2 2 2 2 Beta galactosidase small chain Glyco_hydro_2_N PF02837.13 gi|284167160|ref|YP_003405438.1| - 7.8e-48 162.1 0.4 2.6e-47 160.4 0.3 1.9 2 0 0 2 2 2 1 Glycosyl hydrolases family 2, sugar binding domain Laminin_G_3 PF13385.1 gi|284167160|ref|YP_003405438.1| - 1.9e-36 125.6 6.8 8.9e-23 81.2 0.5 3.5 3 0 0 3 3 3 2 Concanavalin A-like lectin/glucanases superfamily Glyco_hydro_2 PF00703.16 gi|284167160|ref|YP_003405438.1| - 7.7e-15 55.2 0.0 8.4e-14 51.9 0.0 2.6 1 1 0 1 1 1 1 Glycosyl hydrolases family 2 Laminin_G_2 PF02210.19 gi|284167160|ref|YP_003405438.1| - 0.00061 19.8 0.1 0.26 11.3 0.0 2.8 2 0 0 2 2 2 2 Laminin G domain TAT_signal PF10518.4 gi|284167160|ref|YP_003405438.1| - 0.021 14.8 0.7 0.045 13.7 0.5 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PfkB PF00294.19 gi|284167161|ref|YP_003405439.1| - 1.8e-45 155.3 0.3 2.1e-45 155.1 0.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|284167161|ref|YP_003405439.1| - 0.017 14.3 0.1 0.025 13.7 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase OrfB_IS605 PF01385.14 gi|284167162|ref|YP_003405440.1| - 2e-47 161.5 0.2 2.6e-47 161.1 0.1 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|284167162|ref|YP_003405440.1| - 1.7e-22 78.8 1.5 3.5e-22 77.8 1.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|284167162|ref|YP_003405440.1| - 0.00077 18.7 2.4 0.0022 17.2 1.7 1.9 1 0 0 1 1 1 1 TFIIB zinc-binding C1_3 PF07649.7 gi|284167162|ref|YP_003405440.1| - 0.04 13.9 1.7 0.091 12.8 1.2 1.6 1 0 0 1 1 1 0 C1-like domain Ribosomal_L37ae PF01780.14 gi|284167162|ref|YP_003405440.1| - 0.075 12.9 2.1 0.16 11.8 0.4 2.1 2 0 0 2 2 2 0 Ribosomal L37ae protein family RRN7 PF11781.3 gi|284167162|ref|YP_003405440.1| - 5.5 6.5 7.5 1.5 8.4 2.8 1.8 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 Aldolase PF01081.14 gi|284167163|ref|YP_003405441.1| - 5.1e-43 146.5 3.7 6e-43 146.3 2.5 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.12 gi|284167163|ref|YP_003405441.1| - 0.0086 15.2 2.2 0.057 12.5 1.5 2.5 1 1 0 1 1 1 1 Thiamine monophosphate synthase/TENI DUF561 PF04481.7 gi|284167163|ref|YP_003405441.1| - 0.052 12.4 1.1 4.3 6.2 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF561) IMPDH PF00478.20 gi|284167163|ref|YP_003405441.1| - 0.062 12.1 3.2 0.05 12.4 0.3 2.0 3 0 0 3 3 3 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.9 gi|284167163|ref|YP_003405441.1| - 0.075 11.9 3.6 6.4 5.7 0.1 3.3 2 1 0 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase DeoC PF01791.4 gi|284167163|ref|YP_003405441.1| - 0.089 12.0 1.4 0.12 11.6 0.2 1.8 2 0 0 2 2 2 0 DeoC/LacD family aldolase DDE_Tnp_IS240 PF13610.1 gi|284167164|ref|YP_003405442.1| - 1.5e-29 102.8 0.0 2.1e-29 102.2 0.0 1.2 1 0 0 1 1 1 1 DDE domain rve_3 PF13683.1 gi|284167164|ref|YP_003405442.1| - 1.8e-10 40.2 1.0 3.2e-10 39.3 0.7 1.4 1 0 0 1 1 1 1 Integrase core domain rve PF00665.21 gi|284167164|ref|YP_003405442.1| - 8.3e-05 22.6 0.1 0.00031 20.8 0.1 2.0 1 1 0 1 1 1 1 Integrase core domain DDE_Tnp_IS66 PF03050.9 gi|284167164|ref|YP_003405442.1| - 0.0013 18.0 0.1 0.0023 17.2 0.0 1.4 1 1 0 1 1 1 1 Transposase IS66 family rve_2 PF13333.1 gi|284167164|ref|YP_003405442.1| - 0.0063 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain DUF2384 PF09722.5 gi|284167164|ref|YP_003405442.1| - 0.047 13.5 0.5 0.52 10.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2384) RNA_ligase PF09414.5 gi|284167165|ref|YP_003405443.1| - 1.2e-06 28.4 0.0 1.8e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 RNA ligase Lambda_tail_I PF06805.7 gi|284167165|ref|YP_003405443.1| - 0.017 14.9 0.1 0.39 10.5 0.0 2.6 1 1 1 2 2 2 0 Bacteriophage lambda tail assembly protein I Cdc6_C PF09079.6 gi|284167166|ref|YP_003405444.1| - 2.5e-19 68.7 0.0 7.2e-19 67.2 0.0 1.8 2 0 0 2 2 2 1 CDC6, C terminal AAA_22 PF13401.1 gi|284167166|ref|YP_003405444.1| - 1.8e-12 47.5 0.1 4.3e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|284167166|ref|YP_003405444.1| - 2.5e-12 47.1 1.2 1e-11 45.1 0.1 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|284167166|ref|YP_003405444.1| - 8.5e-06 25.9 0.2 3e-05 24.2 0.2 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|284167166|ref|YP_003405444.1| - 2.4e-05 23.8 0.3 0.00015 21.2 0.0 2.1 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF815 PF05673.8 gi|284167166|ref|YP_003405444.1| - 3.4e-05 22.8 0.0 6.3e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.9 gi|284167166|ref|YP_003405444.1| - 7.2e-05 22.5 0.0 0.00019 21.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NACHT PF05729.7 gi|284167166|ref|YP_003405444.1| - 9.1e-05 22.1 0.0 0.00015 21.4 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Sigma54_activ_2 PF14532.1 gi|284167166|ref|YP_003405444.1| - 0.00064 19.7 0.1 0.0015 18.5 0.0 1.7 2 0 0 2 2 1 1 Sigma-54 interaction domain Arch_ATPase PF01637.13 gi|284167166|ref|YP_003405444.1| - 0.0012 18.5 0.3 0.0023 17.6 0.0 1.7 2 0 0 2 2 2 1 Archaeal ATPase PhoH PF02562.11 gi|284167166|ref|YP_003405444.1| - 0.003 16.8 0.5 1.2 8.2 0.1 2.4 2 0 0 2 2 2 2 PhoH-like protein NB-ARC PF00931.17 gi|284167166|ref|YP_003405444.1| - 0.0088 14.9 0.1 0.012 14.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_32 PF13654.1 gi|284167166|ref|YP_003405444.1| - 0.016 13.8 1.0 0.66 8.5 0.4 2.2 2 0 0 2 2 2 0 AAA domain Zot PF05707.7 gi|284167166|ref|YP_003405444.1| - 0.02 14.3 0.0 0.04 13.3 0.0 1.4 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) DUF2791 PF10923.3 gi|284167166|ref|YP_003405444.1| - 0.021 13.4 0.0 0.036 12.6 0.0 1.3 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) RNA_helicase PF00910.17 gi|284167166|ref|YP_003405444.1| - 0.029 14.5 0.0 0.081 13.1 0.0 1.8 1 0 0 1 1 1 0 RNA helicase T2SE PF00437.15 gi|284167166|ref|YP_003405444.1| - 0.029 13.2 0.1 0.073 11.9 0.0 1.7 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF2075 PF09848.4 gi|284167166|ref|YP_003405444.1| - 0.03 13.2 0.0 0.045 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.1 gi|284167166|ref|YP_003405444.1| - 0.038 14.7 0.7 0.21 12.4 0.5 2.6 1 1 1 2 2 1 0 AAA domain ABC_tran PF00005.22 gi|284167166|ref|YP_003405444.1| - 0.042 14.1 0.3 0.12 12.7 0.2 2.0 1 1 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.18 gi|284167166|ref|YP_003405444.1| - 0.075 12.9 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase DEAD PF00270.24 gi|284167166|ref|YP_003405444.1| - 0.11 11.9 1.1 8.6 5.8 0.1 2.5 1 1 0 2 2 2 0 DEAD/DEAH box helicase Ribosomal_S17e PF00833.13 gi|284167167|ref|YP_003405445.1| - 3.1e-12 46.3 0.0 3.4e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal S17 Amidohydro_1 PF01979.15 gi|284167168|ref|YP_003405446.1| - 9.1e-52 176.7 0.1 1.2e-51 176.3 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|284167168|ref|YP_003405446.1| - 6.2e-15 55.9 1.3 3.7e-14 53.4 0.9 2.2 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|284167168|ref|YP_003405446.1| - 9.3e-11 41.5 0.9 5.3e-10 39.0 0.0 2.3 2 1 0 2 2 2 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|284167168|ref|YP_003405446.1| - 0.0024 17.6 1.7 0.006 16.3 0.0 2.5 3 0 0 3 3 3 1 Amidohydrolase A_deaminase PF00962.17 gi|284167168|ref|YP_003405446.1| - 0.011 14.6 0.0 0.02 13.8 0.0 1.4 1 0 0 1 1 1 0 Adenosine/AMP deaminase ABC_tran PF00005.22 gi|284167169|ref|YP_003405447.1| - 4.8e-27 94.9 0.0 7.6e-27 94.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167169|ref|YP_003405447.1| - 6e-08 32.9 0.0 0.0042 17.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.18 gi|284167169|ref|YP_003405447.1| - 5.7e-05 23.0 0.0 0.00068 19.5 0.0 2.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase SMC_N PF02463.14 gi|284167169|ref|YP_003405447.1| - 0.00033 19.9 0.0 0.05 12.8 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|284167169|ref|YP_003405447.1| - 0.0004 19.8 0.3 0.0015 17.9 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|284167169|ref|YP_003405447.1| - 0.00054 19.5 0.2 0.0016 18.0 0.1 1.8 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|284167169|ref|YP_003405447.1| - 0.00076 20.2 1.3 0.0018 19.0 0.2 2.0 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|284167169|ref|YP_003405447.1| - 0.00083 19.3 1.6 0.0024 17.8 1.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|284167169|ref|YP_003405447.1| - 0.003 16.7 0.0 0.0062 15.7 0.0 1.5 2 0 0 2 2 1 1 Protein of unknown function, DUF258 AAA_19 PF13245.1 gi|284167169|ref|YP_003405447.1| - 0.0042 16.7 1.6 0.0042 16.7 1.1 2.2 2 0 0 2 2 2 1 Part of AAA domain Zeta_toxin PF06414.7 gi|284167169|ref|YP_003405447.1| - 0.0057 15.7 0.2 0.012 14.6 0.0 1.6 2 0 0 2 2 2 1 Zeta toxin MobB PF03205.9 gi|284167169|ref|YP_003405447.1| - 0.0064 16.2 0.1 0.017 14.8 0.1 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DUF3584 PF12128.3 gi|284167169|ref|YP_003405447.1| - 0.0074 13.6 0.0 0.0099 13.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) AAA_23 PF13476.1 gi|284167169|ref|YP_003405447.1| - 0.0088 16.3 0.0 0.013 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|284167169|ref|YP_003405447.1| - 0.012 15.7 0.2 0.035 14.2 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|284167169|ref|YP_003405447.1| - 0.016 15.0 1.1 0.032 14.1 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|284167169|ref|YP_003405447.1| - 0.027 14.2 0.0 0.061 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.1 gi|284167169|ref|YP_003405447.1| - 0.027 14.4 1.0 0.057 13.3 0.3 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|284167169|ref|YP_003405447.1| - 0.036 14.3 0.2 0.065 13.5 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.24 gi|284167169|ref|YP_003405447.1| - 0.038 14.1 0.2 0.095 12.8 0.1 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 gi|284167169|ref|YP_003405447.1| - 0.042 13.5 0.1 0.093 12.3 0.0 1.6 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.1 gi|284167169|ref|YP_003405447.1| - 0.058 12.7 0.1 0.13 11.6 0.1 1.6 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.4 gi|284167169|ref|YP_003405447.1| - 0.06 12.8 0.0 0.26 10.7 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.1 gi|284167169|ref|YP_003405447.1| - 0.062 12.8 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|284167169|ref|YP_003405447.1| - 0.07 12.6 0.1 0.2 11.1 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family IstB_IS21 PF01695.12 gi|284167169|ref|YP_003405447.1| - 0.072 12.5 0.1 0.45 9.9 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein cobW PF02492.14 gi|284167169|ref|YP_003405447.1| - 0.095 12.1 0.7 0.25 10.7 0.2 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Miro PF08477.8 gi|284167169|ref|YP_003405447.1| - 0.1 13.0 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein AAA_10 PF12846.2 gi|284167169|ref|YP_003405447.1| - 0.11 11.9 0.3 0.22 10.8 0.1 1.5 2 0 0 2 2 2 0 AAA-like domain Phosphonate-bd PF12974.2 gi|284167170|ref|YP_003405448.1| - 9.7e-60 201.9 0.5 1.1e-59 201.7 0.3 1.0 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein OpuAC PF04069.7 gi|284167170|ref|YP_003405448.1| - 0.00036 19.9 0.1 0.00084 18.7 0.0 1.6 2 0 0 2 2 2 1 Substrate binding domain of ABC-type glycine betaine transport system SBP_bac_3 PF00497.15 gi|284167170|ref|YP_003405448.1| - 0.017 14.4 0.0 0.052 12.8 0.0 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 Lipoprotein_9 PF03180.9 gi|284167170|ref|YP_003405448.1| - 0.024 13.5 0.0 0.032 13.1 0.0 1.2 1 0 0 1 1 1 0 NLPA lipoprotein NMT1 PF09084.6 gi|284167170|ref|YP_003405448.1| - 0.051 13.1 0.0 0.08 12.5 0.0 1.2 1 0 0 1 1 1 0 NMT1/THI5 like TusA PF01206.12 gi|284167171|ref|YP_003405449.1| - 1.8e-15 56.3 0.0 2e-15 56.1 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA Ribonuc_L-PSP PF01042.16 gi|284167172|ref|YP_003405450.1| - 3.2e-40 136.6 0.0 3.5e-40 136.5 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Xan_ur_permease PF00860.15 gi|284167173|ref|YP_003405451.1| - 7.6e-36 123.4 41.1 9.1e-36 123.1 28.5 1.1 1 0 0 1 1 1 1 Permease family ELF PF03317.8 gi|284167173|ref|YP_003405451.1| - 0.0036 16.6 0.2 0.0074 15.6 0.2 1.5 1 0 0 1 1 1 1 ELF protein DUF1628 PF07790.6 gi|284167173|ref|YP_003405451.1| - 1.5 9.6 6.5 0.21 12.3 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1628) MFS_1 PF07690.11 gi|284167174|ref|YP_003405452.1| - 2.4e-53 181.1 92.9 2.4e-45 154.7 38.5 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.14 gi|284167174|ref|YP_003405452.1| - 7.1e-06 24.8 5.0 0.0081 14.7 0.0 2.3 2 0 0 2 2 2 2 LacY proton/sugar symporter MFS_3 PF05977.8 gi|284167174|ref|YP_003405452.1| - 1.2e-05 23.7 26.9 2.5e-05 22.5 18.7 1.4 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.1 gi|284167174|ref|YP_003405452.1| - 0.0022 16.4 21.8 0.037 12.4 0.4 2.5 1 1 0 2 2 2 2 MFS/sugar transport protein MFS_1_like PF12832.2 gi|284167174|ref|YP_003405452.1| - 0.2 11.4 0.1 0.2 11.4 0.0 3.4 3 0 0 3 3 3 0 MFS_1 like family MoeA_N PF03453.12 gi|284167175|ref|YP_003405453.1| - 1.5e-27 95.9 0.0 3.6e-27 94.7 0.0 1.7 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|284167175|ref|YP_003405453.1| - 5.7e-27 93.8 0.1 9.5e-27 93.1 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MutL PF13941.1 gi|284167175|ref|YP_003405453.1| - 0.078 11.2 0.0 0.11 10.7 0.0 1.1 1 0 0 1 1 1 0 MutL protein 7TMR-HDED PF07697.6 gi|284167175|ref|YP_003405453.1| - 0.099 12.3 0.1 0.29 10.8 0.0 1.8 2 0 0 2 2 2 0 7TM-HD extracellular HobA PF12163.3 gi|284167176|ref|YP_003405454.1| - 0.079 12.2 0.3 0.079 12.2 0.2 1.0 1 0 0 1 1 1 0 DNA replication regulator RHH_1 PF01402.16 gi|284167176|ref|YP_003405454.1| - 0.079 12.8 2.4 2.3 8.2 0.1 2.2 1 1 1 2 2 2 0 Ribbon-helix-helix protein, copG family OrfB_IS605 PF01385.14 gi|284167177|ref|YP_003405455.1| - 5.7e-27 94.5 0.1 8e-27 94.0 0.0 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|284167177|ref|YP_003405455.1| - 5.1e-23 80.5 2.0 1.4e-22 79.0 0.1 2.3 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.3 gi|284167177|ref|YP_003405455.1| - 9.5e-08 31.2 0.1 2.2e-07 30.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS91 PF14319.1 gi|284167177|ref|YP_003405455.1| - 0.022 14.2 0.4 0.057 12.9 0.3 1.7 1 0 0 1 1 1 0 Transposase zinc-binding domain DZR PF12773.2 gi|284167177|ref|YP_003405455.1| - 0.031 14.1 1.2 0.031 14.1 0.8 1.7 2 0 0 2 2 2 0 Double zinc ribbon Pox_A_type_inc PF04508.7 gi|284167177|ref|YP_003405455.1| - 8.7 6.4 11.9 1.2 9.0 1.9 2.8 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Xan_ur_permease PF00860.15 gi|284167178|ref|YP_003405456.1| - 3.2e-94 315.5 45.8 4e-94 315.2 31.7 1.1 1 0 0 1 1 1 1 Permease family DUF3094 PF11293.3 gi|284167178|ref|YP_003405456.1| - 0.064 12.7 0.5 0.28 10.6 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) Adenine_deam_C PF13382.1 gi|284167180|ref|YP_003405458.1| - 1.6e-51 173.8 0.4 3.4e-51 172.8 0.0 1.7 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|284167180|ref|YP_003405458.1| - 8.9e-26 91.3 0.1 9.6e-24 84.6 0.0 2.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|284167180|ref|YP_003405458.1| - 3.8e-12 46.8 6.4 3.5e-05 23.9 0.0 2.5 1 1 0 2 2 2 2 Amidohydrolase Amidohydro_5 PF13594.1 gi|284167180|ref|YP_003405458.1| - 4.5e-09 35.9 1.3 1.2e-08 34.6 0.0 2.5 3 0 0 3 3 3 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|284167180|ref|YP_003405458.1| - 2.9e-06 26.7 2.4 0.02 14.0 0.0 2.7 2 1 0 2 2 2 2 Amidohydrolase family Acetyltransf_10 PF13673.1 gi|284167181|ref|YP_003405459.1| - 8.7e-09 35.5 0.2 1.4e-08 34.9 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|284167181|ref|YP_003405459.1| - 6.7e-07 29.3 0.0 9.2e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|284167181|ref|YP_003405459.1| - 1.2e-05 25.2 0.1 2.1e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|284167181|ref|YP_003405459.1| - 0.0018 18.3 0.0 0.0033 17.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain NTP_transf_3 PF12804.2 gi|284167182|ref|YP_003405460.1| - 1e-39 136.1 0.2 1.3e-39 135.8 0.2 1.0 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|284167182|ref|YP_003405460.1| - 2.5e-06 27.1 0.1 3.3e-06 26.7 0.1 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|284167182|ref|YP_003405460.1| - 0.014 14.7 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase CTP_transf_3 PF02348.14 gi|284167182|ref|YP_003405460.1| - 0.057 13.0 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytidylyltransferase TusA PF01206.12 gi|284167184|ref|YP_003405462.1| - 8.9e-17 60.4 0.0 1e-16 60.2 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|284167184|ref|YP_003405462.1| - 0.056 13.0 0.0 0.085 12.4 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) AIRS_C PF02769.17 gi|284167185|ref|YP_003405463.1| - 1.6e-20 73.6 0.3 2.5e-20 73.0 0.2 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|284167185|ref|YP_003405463.1| - 1.4e-08 34.8 2.4 1.4e-08 34.8 1.7 2.1 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain XdhC_C PF13478.1 gi|284167186|ref|YP_003405464.1| - 2.1e-35 121.9 0.6 5e-34 117.5 0.0 2.2 2 0 0 2 2 2 1 XdhC Rossmann domain XdhC_CoxI PF02625.11 gi|284167186|ref|YP_003405464.1| - 1.3e-20 72.7 0.1 1.3e-20 72.7 0.1 2.6 2 0 0 2 2 2 1 XdhC and CoxI family Pyr_redox PF00070.22 gi|284167186|ref|YP_003405464.1| - 2.2e-05 24.7 0.2 0.002 18.5 0.0 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.13 gi|284167186|ref|YP_003405464.1| - 0.00011 22.1 2.1 0.2 11.6 0.0 2.8 3 0 0 3 3 3 2 TrkA-N domain 3HCDH_N PF02737.13 gi|284167186|ref|YP_003405464.1| - 0.00069 19.3 4.0 0.41 10.2 0.1 3.0 3 1 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|284167186|ref|YP_003405464.1| - 0.0093 15.1 0.1 0.21 10.7 0.0 2.5 2 1 1 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DsrH PF04077.7 gi|284167187|ref|YP_003405465.1| - 3.7e-06 26.4 0.9 6.6e-05 22.4 0.6 2.0 1 1 0 1 1 1 1 DsrH like protein DrsE PF02635.10 gi|284167188|ref|YP_003405466.1| - 2.4e-13 50.2 0.0 2.6e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE PF02635.10 gi|284167189|ref|YP_003405467.1| - 7e-26 90.6 0.0 7.9e-26 90.5 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family Ald_Xan_dh_C2 PF02738.13 gi|284167190|ref|YP_003405468.1| - 1.9e-132 442.4 0.0 2.4e-132 442.0 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.17 gi|284167190|ref|YP_003405468.1| - 1.3e-23 83.1 0.1 2.5e-23 82.2 0.1 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer2_2 PF01799.15 gi|284167191|ref|YP_003405469.1| - 1.6e-34 117.5 0.0 1.6e-34 117.5 0.0 1.6 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.22 gi|284167191|ref|YP_003405469.1| - 1.2e-09 37.7 0.3 1.2e-09 37.7 0.2 2.2 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.1 gi|284167191|ref|YP_003405469.1| - 1e-06 28.4 0.1 1.7e-06 27.8 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.1 gi|284167191|ref|YP_003405469.1| - 2.3e-05 24.0 0.9 6.4e-05 22.6 0.6 1.8 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.13 gi|284167192|ref|YP_003405470.1| - 8.7e-132 440.2 0.8 1.3e-131 439.6 0.5 1.2 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.17 gi|284167192|ref|YP_003405470.1| - 7.8e-24 83.8 1.5 1.8e-23 82.7 1.1 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer2_2 PF01799.15 gi|284167193|ref|YP_003405471.1| - 5.9e-32 109.4 0.1 1.7e-31 107.8 0.0 1.8 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.22 gi|284167193|ref|YP_003405471.1| - 3.3e-05 23.5 1.7 3.3e-05 23.5 1.2 2.1 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.1 gi|284167193|ref|YP_003405471.1| - 0.0042 16.8 0.1 0.0072 16.1 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain F420_oxidored PF03807.12 gi|284167194|ref|YP_003405472.1| - 2.5e-18 66.3 0.4 6.1e-18 65.0 0.0 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.12 gi|284167194|ref|YP_003405472.1| - 0.0012 17.8 0.1 0.06 12.2 0.0 2.1 2 0 0 2 2 2 2 Prephenate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|284167194|ref|YP_003405472.1| - 0.0044 16.7 0.0 0.0057 16.3 0.0 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus adh_short PF00106.20 gi|284167194|ref|YP_003405472.1| - 0.0072 16.2 1.3 0.027 14.3 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase Semialdhyde_dh PF01118.19 gi|284167194|ref|YP_003405472.1| - 0.039 14.2 0.1 0.076 13.3 0.0 1.6 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain BPD_transp_1 PF00528.17 gi|284167195|ref|YP_003405473.1| - 1e-15 57.7 6.4 1e-15 57.7 4.4 2.2 1 1 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component Peptidase_M20 PF01546.23 gi|284167196|ref|YP_003405474.1| - 3.8e-26 91.7 0.5 5.4e-26 91.2 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|284167196|ref|YP_003405474.1| - 6e-09 35.6 0.0 1.2e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.12 gi|284167196|ref|YP_003405474.1| - 9.7e-05 22.1 0.0 0.00016 21.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 Amidohydro_3 PF07969.6 gi|284167197|ref|YP_003405475.1| - 1.3e-14 54.2 6.2 5.5e-14 52.1 4.3 1.9 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|284167197|ref|YP_003405475.1| - 1.5e-14 53.5 0.5 5.2e-14 51.8 0.0 2.2 2 0 0 2 2 2 1 Amidohydrolase D-aminoacyl_C PF07908.7 gi|284167197|ref|YP_003405475.1| - 4.8e-14 51.3 0.9 1.1e-13 50.2 0.1 2.1 2 0 0 2 2 2 1 D-aminoacylase, C-terminal region Amidohydro_4 PF13147.1 gi|284167197|ref|YP_003405475.1| - 5.9e-11 42.9 8.3 7.4e-09 36.0 5.7 2.8 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|284167197|ref|YP_003405475.1| - 3e-06 27.1 0.0 0.0096 15.6 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family Bac_luciferase PF00296.15 gi|284167198|ref|YP_003405476.1| - 7.7e-54 182.8 0.1 9.4e-54 182.6 0.1 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PALP PF00291.20 gi|284167199|ref|YP_003405477.1| - 3.2e-63 213.7 0.5 3.9e-63 213.5 0.3 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme C1_2 PF03107.11 gi|284167199|ref|YP_003405477.1| - 0.0023 18.0 0.4 0.0043 17.1 0.3 1.5 1 0 0 1 1 1 1 C1 domain PK_C PF02887.11 gi|284167199|ref|YP_003405477.1| - 0.023 14.2 0.9 3.2 7.3 0.0 2.4 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain Inositol_P PF00459.20 gi|284167200|ref|YP_003405478.1| - 1.8e-62 211.0 0.4 3.5e-62 210.1 0.3 1.4 1 0 0 1 1 1 1 Inositol monophosphatase family NAD_kinase PF01513.16 gi|284167200|ref|YP_003405478.1| - 5.7e-35 120.4 0.2 9e-35 119.8 0.1 1.3 1 0 0 1 1 1 1 ATP-NAD kinase FBPase PF00316.15 gi|284167200|ref|YP_003405478.1| - 0.0043 15.9 0.0 0.0072 15.1 0.0 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase Amidohydro_4 PF13147.1 gi|284167201|ref|YP_003405479.1| - 2.4e-18 67.1 4.2 8.7e-18 65.3 1.8 2.4 2 1 0 2 2 2 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|284167201|ref|YP_003405479.1| - 1.1e-13 50.7 1.6 6.2e-13 48.3 1.4 2.2 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|284167201|ref|YP_003405479.1| - 3.6e-13 49.8 0.0 5.7e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.15 gi|284167201|ref|YP_003405479.1| - 0.063 13.4 2.0 0.099 12.7 0.5 1.9 2 0 0 2 2 2 0 Urease alpha-subunit, N-terminal domain Amidohydro_1 PF01979.15 gi|284167202|ref|YP_003405480.1| - 3.1e-36 125.7 0.1 4.1e-36 125.3 0.1 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|284167202|ref|YP_003405480.1| - 1.4e-14 53.6 0.1 1.1e-13 50.7 0.0 2.6 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|284167202|ref|YP_003405480.1| - 5.3e-09 35.7 0.7 8e-06 25.3 0.0 2.3 1 1 0 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|284167202|ref|YP_003405480.1| - 1.8e-08 34.7 0.1 0.003 17.6 0.0 2.6 1 1 0 2 2 2 2 Amidohydrolase TatD_DNase PF01026.16 gi|284167202|ref|YP_003405480.1| - 0.11 11.6 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase AAA_23 PF13476.1 gi|284167204|ref|YP_003405482.1| - 1.6e-08 35.1 54.4 1.3 9.3 37.7 3.7 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 gi|284167204|ref|YP_003405482.1| - 8.5e-08 31.1 43.2 2.1e-06 26.5 14.0 3.1 1 1 2 3 3 3 2 AAA domain FliJ PF02050.11 gi|284167204|ref|YP_003405482.1| - 0.00029 20.8 57.4 0.029 14.4 9.2 6.5 3 2 4 7 7 7 2 Flagellar FliJ protein AAA_21 PF13304.1 gi|284167204|ref|YP_003405482.1| - 0.00038 20.4 2.7 0.0038 17.2 0.1 2.7 2 1 0 2 2 2 1 AAA domain TPR_MLP1_2 PF07926.7 gi|284167204|ref|YP_003405482.1| - 0.0012 18.5 66.2 0.023 14.4 16.3 4.9 2 1 1 3 3 2 2 TPR/MLP1/MLP2-like protein Med9 PF07544.8 gi|284167204|ref|YP_003405482.1| - 0.0054 16.4 5.6 0.0054 16.4 3.9 6.3 3 2 2 5 5 4 1 RNA polymerase II transcription mediator complex subunit 9 SMC_N PF02463.14 gi|284167204|ref|YP_003405482.1| - 0.0059 15.8 0.0 0.0059 15.8 0.0 2.5 2 1 0 2 2 1 1 RecF/RecN/SMC N terminal domain Laminin_II PF06009.7 gi|284167204|ref|YP_003405482.1| - 0.0068 16.1 40.0 0.018 14.7 6.9 4.6 2 2 3 5 5 5 3 Laminin Domain II Tropomyosin_1 PF12718.2 gi|284167204|ref|YP_003405482.1| - 0.0078 16.0 24.1 0.0078 16.0 16.7 4.1 2 2 1 3 3 3 1 Tropomyosin like MscS_porin PF12795.2 gi|284167204|ref|YP_003405482.1| - 0.016 14.5 60.8 0.16 11.2 16.5 4.3 3 2 0 3 3 3 0 Mechanosensitive ion channel porin domain IncA PF04156.9 gi|284167204|ref|YP_003405482.1| - 0.023 14.3 80.8 1.2 8.7 19.0 4.2 1 1 2 3 3 2 0 IncA protein GAS PF13851.1 gi|284167204|ref|YP_003405482.1| - 0.025 13.7 63.3 0.045 12.9 12.5 4.1 2 2 2 4 4 4 0 Growth-arrest specific micro-tubule binding Tenui_NS3 PF05310.7 gi|284167204|ref|YP_003405482.1| - 0.044 13.6 0.0 0.087 12.7 0.0 1.4 1 0 0 1 1 1 0 Tenuivirus movement protein DUF1910 PF08928.5 gi|284167204|ref|YP_003405482.1| - 0.047 13.7 0.3 0.047 13.7 0.2 4.4 4 1 0 4 4 4 0 Domain of unknown function (DUF1910) Mod_r PF07200.8 gi|284167204|ref|YP_003405482.1| - 0.08 12.8 52.5 0.41 10.5 6.5 5.2 1 1 4 5 5 5 0 Modifier of rudimentary (Mod(r)) protein DUF3584 PF12128.3 gi|284167204|ref|YP_003405482.1| - 0.11 9.8 61.8 26 1.9 43.0 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3584) Reo_sigmaC PF04582.7 gi|284167204|ref|YP_003405482.1| - 0.17 11.0 14.9 0.035 13.2 1.9 3.0 1 1 2 3 3 3 0 Reovirus sigma C capsid protein Spc7 PF08317.6 gi|284167204|ref|YP_003405482.1| - 0.2 10.2 60.5 0.57 8.7 14.4 3.3 1 1 3 4 4 4 0 Spc7 kinetochore protein BLOC1_2 PF10046.4 gi|284167204|ref|YP_003405482.1| - 0.29 11.3 37.6 0.2 11.8 1.5 5.5 3 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA_27 PF13514.1 gi|284167204|ref|YP_003405482.1| - 0.32 8.6 63.2 0.025 12.2 22.7 2.2 1 1 1 2 2 2 0 AAA domain NPV_P10 PF05531.7 gi|284167204|ref|YP_003405482.1| - 0.42 10.9 23.9 0.25 11.6 0.9 5.2 4 2 0 5 5 4 0 Nucleopolyhedrovirus P10 protein MCPsignal PF00015.16 gi|284167204|ref|YP_003405482.1| - 0.61 9.5 27.3 1.2 8.6 0.7 3.4 1 1 3 4 4 4 0 Methyl-accepting chemotaxis protein (MCP) signalling domain CENP-F_leu_zip PF10473.4 gi|284167204|ref|YP_003405482.1| - 0.75 9.6 75.5 8.9 6.1 3.4 4.6 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF2730 PF10805.3 gi|284167204|ref|YP_003405482.1| - 1.1 9.0 36.2 1.5 8.6 1.4 4.5 4 0 0 4 4 4 0 Protein of unknown function (DUF2730) DUF972 PF06156.8 gi|284167204|ref|YP_003405482.1| - 1.5 9.1 46.4 0.56 10.5 3.9 4.8 2 2 3 5 5 5 0 Protein of unknown function (DUF972) DUF1664 PF07889.7 gi|284167204|ref|YP_003405482.1| - 2.9 7.7 38.9 0.63 9.8 3.7 5.6 3 2 2 5 5 5 0 Protein of unknown function (DUF1664) HOOK PF05622.7 gi|284167204|ref|YP_003405482.1| - 3 5.5 60.6 0.014 13.2 11.1 3.4 1 1 2 3 3 3 0 HOOK protein Atg14 PF10186.4 gi|284167204|ref|YP_003405482.1| - 3.1 6.6 64.5 43 2.9 5.4 4.1 1 1 2 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 Laminin_I PF06008.9 gi|284167204|ref|YP_003405482.1| - 4 6.6 51.6 0.11 11.8 14.1 3.0 1 1 1 2 2 2 0 Laminin Domain I TBPIP PF07106.8 gi|284167204|ref|YP_003405482.1| - 4.9 6.6 57.4 0.56 9.7 4.2 4.7 2 2 2 4 4 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) ADIP PF11559.3 gi|284167204|ref|YP_003405482.1| - 5.4 6.8 62.1 5.1 6.9 2.6 5.0 3 1 2 5 5 5 0 Afadin- and alpha -actinin-Binding Filament PF00038.16 gi|284167204|ref|YP_003405482.1| - 6 6.2 67.9 0.31 10.4 22.6 3.7 2 2 0 2 2 2 0 Intermediate filament protein Spectrin PF00435.16 gi|284167204|ref|YP_003405482.1| - 8.8 6.6 54.6 0.31 11.3 4.9 5.0 1 1 3 4 4 4 0 Spectrin repeat Baculo_RING PF05883.6 gi|284167206|ref|YP_003405484.1| - 0.066 13.0 0.2 0.12 12.1 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain UPF0547 PF10571.4 gi|284167206|ref|YP_003405484.1| - 0.16 11.7 0.6 0.39 10.4 0.4 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.1 gi|284167206|ref|YP_003405484.1| - 0.2 10.9 1.1 0.36 10.0 0.0 1.9 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|284167206|ref|YP_003405484.1| - 0.22 11.0 0.0 0.22 11.0 0.0 2.2 3 0 0 3 3 3 0 zinc-ribbon domain DUF177 PF02620.12 gi|284167206|ref|YP_003405484.1| - 0.3 11.1 5.1 0.25 11.3 0.5 2.5 2 0 0 2 2 2 0 Uncharacterized ACR, COG1399 DUF2061 PF09834.4 gi|284167207|ref|YP_003405485.1| - 2e-14 53.5 1.2 2.6e-14 53.1 0.8 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2061) MaoC_dehydratas PF01575.14 gi|284167210|ref|YP_003405488.1| - 6.9e-17 60.9 0.0 7.7e-17 60.8 0.0 1.0 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.1 gi|284167210|ref|YP_003405488.1| - 1.2e-06 28.3 0.0 2.6e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Metallophos_2 PF12850.2 gi|284167211|ref|YP_003405489.1| - 1e-10 41.6 0.2 1.9e-10 40.7 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|284167211|ref|YP_003405489.1| - 4.8e-09 35.8 0.7 5.9e-08 32.3 0.5 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|284167211|ref|YP_003405489.1| - 0.00011 21.4 0.0 0.0017 17.5 0.0 2.1 2 0 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily CbiA PF01656.18 gi|284167212|ref|YP_003405490.1| - 5.1e-20 71.7 0.0 6.1e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|284167212|ref|YP_003405490.1| - 5e-08 33.0 0.0 5.9e-07 29.5 0.0 2.3 1 1 0 1 1 1 1 AAA domain YhjQ PF06564.7 gi|284167212|ref|YP_003405490.1| - 9.5e-05 21.8 0.1 0.00021 20.7 0.1 1.5 1 1 0 1 1 1 1 YhjQ protein ArsA_ATPase PF02374.10 gi|284167212|ref|YP_003405490.1| - 0.00023 20.3 0.2 0.00066 18.8 0.1 1.8 1 1 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.6 gi|284167212|ref|YP_003405490.1| - 0.0011 18.1 0.1 0.13 11.3 0.0 2.1 2 0 0 2 2 2 2 ATPase MipZ Fer4_NifH PF00142.13 gi|284167212|ref|YP_003405490.1| - 0.0034 16.5 0.0 0.0092 15.1 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_16 PF13191.1 gi|284167212|ref|YP_003405490.1| - 0.012 15.5 0.6 0.023 14.6 0.1 1.7 2 1 0 2 2 2 0 AAA ATPase domain AAA_10 PF12846.2 gi|284167212|ref|YP_003405490.1| - 0.014 14.8 0.0 0.09 12.2 0.0 1.9 1 1 1 2 2 2 0 AAA-like domain ArgK PF03308.11 gi|284167212|ref|YP_003405490.1| - 0.13 11.0 0.0 0.26 10.0 0.0 1.5 1 0 0 1 1 1 0 ArgK protein AAA_25 PF13481.1 gi|284167212|ref|YP_003405490.1| - 0.14 11.5 0.5 0.25 10.7 0.1 1.8 2 1 0 2 2 2 0 AAA domain DUF3362 PF11842.3 gi|284167213|ref|YP_003405491.1| - 0.099 12.5 0.4 0.16 11.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3362) DUF2543 PF10820.3 gi|284167213|ref|YP_003405491.1| - 0.31 11.0 0.0 0.31 11.0 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2543) Presenilin PF01080.12 gi|284167213|ref|YP_003405491.1| - 3.6 6.3 4.5 4.4 6.0 3.1 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.9 gi|284167213|ref|YP_003405491.1| - 6.5 4.6 10.6 7.3 4.4 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF3649 PF12365.3 gi|284167214|ref|YP_003405492.1| - 0.023 14.2 0.1 0.045 13.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3649) DUF2834 PF11196.3 gi|284167214|ref|YP_003405492.1| - 0.085 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) DUF2975 PF11188.3 gi|284167214|ref|YP_003405492.1| - 0.1 12.3 0.4 0.12 12.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) PAS_9 PF13426.1 gi|284167215|ref|YP_003405493.1| - 2e-55 185.5 0.5 2.4e-19 69.6 0.1 4.5 4 0 0 4 4 4 4 PAS domain PAS_4 PF08448.5 gi|284167215|ref|YP_003405493.1| - 3.9e-50 168.4 19.5 1.6e-17 63.5 0.3 4.9 5 0 0 5 5 5 4 PAS fold PAS PF00989.19 gi|284167215|ref|YP_003405493.1| - 3.3e-31 107.3 0.6 2.4e-09 36.9 0.0 5.3 4 1 0 4 4 4 4 PAS fold HATPase_c PF02518.21 gi|284167215|ref|YP_003405493.1| - 9.8e-31 105.7 0.1 1e-29 102.4 0.0 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|284167215|ref|YP_003405493.1| - 1.5e-21 75.4 0.1 0.00056 19.6 0.0 4.8 4 0 0 4 4 4 4 PAS domain HisKA PF00512.20 gi|284167215|ref|YP_003405493.1| - 4e-10 39.5 0.1 4e-10 39.5 0.1 3.0 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain PAS_10 PF13596.1 gi|284167215|ref|YP_003405493.1| - 1.3e-09 38.2 0.0 0.0045 17.2 0.0 3.6 3 1 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|284167215|ref|YP_003405493.1| - 1.8e-08 34.3 0.8 0.0011 19.0 0.1 5.4 5 1 0 5 5 5 1 PAS fold PAS_7 PF12860.2 gi|284167215|ref|YP_003405493.1| - 6.4e-07 29.3 2.7 0.28 11.1 0.1 5.8 4 3 0 4 4 4 2 PAS fold HATPase_c_5 PF14501.1 gi|284167215|ref|YP_003405493.1| - 0.0005 19.7 0.0 0.00099 18.7 0.0 1.4 1 0 0 1 1 1 1 GHKL domain GAF_3 PF13492.1 gi|284167215|ref|YP_003405493.1| - 0.0007 19.6 0.2 0.0032 17.5 0.1 2.2 1 1 1 2 2 2 1 GAF domain HATPase_c_2 PF13581.1 gi|284167215|ref|YP_003405493.1| - 0.0029 17.3 0.1 0.015 15.0 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain V_ATPase_I PF01496.14 gi|284167215|ref|YP_003405493.1| - 0.66 7.7 1.4 1.4 6.6 1.0 1.5 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family TPR_MLP1_2 PF07926.7 gi|284167215|ref|YP_003405493.1| - 6.5 6.5 12.7 0.13 12.0 1.6 3.1 3 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein Hexapep PF00132.19 gi|284167217|ref|YP_003405495.1| - 4.4e-13 48.1 12.4 2.5e-08 33.0 2.3 3.3 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) SATase_N PF06426.9 gi|284167217|ref|YP_003405495.1| - 1.3e-06 28.5 0.0 2.8e-06 27.5 0.0 1.6 1 1 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep_2 PF14602.1 gi|284167217|ref|YP_003405495.1| - 1.5e-06 27.6 5.7 7.7e-05 22.1 1.1 2.6 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF1996 PF09362.5 gi|284167217|ref|YP_003405495.1| - 0.15 11.7 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) Fic PF02661.13 gi|284167218|ref|YP_003405496.1| - 1.2e-18 67.5 0.0 3.6e-18 66.0 0.0 1.9 1 0 0 1 1 1 1 Fic/DOC family Fic_N PF13784.1 gi|284167218|ref|YP_003405496.1| - 3.7e-12 45.9 0.0 6.3e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 Fic/DOC family N-terminal TrmB PF01978.14 gi|284167218|ref|YP_003405496.1| - 0.00013 21.6 0.1 0.00073 19.2 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|284167218|ref|YP_003405496.1| - 0.00052 19.6 0.0 0.0012 18.4 0.0 1.6 1 0 0 1 1 1 1 HTH domain DUF4172 PF13776.1 gi|284167218|ref|YP_003405496.1| - 0.03 14.4 0.0 0.17 12.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4172) HTH_20 PF12840.2 gi|284167218|ref|YP_003405496.1| - 0.055 13.2 0.0 0.13 12.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.16 gi|284167218|ref|YP_003405496.1| - 0.068 12.6 0.0 0.29 10.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_20 PF12840.2 gi|284167224|ref|YP_003405502.1| - 1.1e-07 31.5 0.1 1.9e-07 30.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|284167224|ref|YP_003405502.1| - 2e-07 30.9 0.0 5.1e-07 29.6 0.0 1.7 1 1 1 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|284167224|ref|YP_003405502.1| - 1.4e-05 24.6 0.1 2.6e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|284167224|ref|YP_003405502.1| - 1.9e-05 23.9 0.7 9.5e-05 21.7 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|284167224|ref|YP_003405502.1| - 6.1e-05 22.5 0.1 0.00022 20.7 0.1 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain PadR PF03551.9 gi|284167224|ref|YP_003405502.1| - 0.0065 16.2 0.1 0.015 15.0 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|284167224|ref|YP_003405502.1| - 0.0066 16.5 0.1 0.014 15.5 0.0 1.5 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) B-block_TFIIIC PF04182.7 gi|284167224|ref|YP_003405502.1| - 0.0083 15.9 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_5 PF01022.15 gi|284167224|ref|YP_003405502.1| - 0.011 15.4 0.0 0.02 14.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|284167224|ref|YP_003405502.1| - 0.011 16.0 0.2 0.032 14.5 0.0 1.9 1 1 1 2 2 2 0 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|284167224|ref|YP_003405502.1| - 0.011 15.5 0.0 0.079 12.7 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix MarR PF01047.17 gi|284167224|ref|YP_003405502.1| - 0.026 14.2 0.2 0.1 12.3 0.0 2.2 2 1 0 2 2 2 0 MarR family DUF4164 PF13747.1 gi|284167224|ref|YP_003405502.1| - 0.027 14.6 1.1 0.21 11.7 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) TrmB PF01978.14 gi|284167224|ref|YP_003405502.1| - 0.032 13.9 0.0 0.077 12.7 0.0 1.7 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Cep57_MT_bd PF06657.8 gi|284167224|ref|YP_003405502.1| - 0.034 14.0 1.7 0.05 13.5 0.5 1.8 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Osmo_CC PF08946.5 gi|284167224|ref|YP_003405502.1| - 0.044 13.8 0.8 0.11 12.5 0.5 1.6 1 0 0 1 1 1 0 Osmosensory transporter coiled coil DUF387 PF04079.11 gi|284167224|ref|YP_003405502.1| - 0.053 12.8 0.1 0.15 11.4 0.0 1.8 2 1 0 2 2 2 0 Putative transcriptional regulators (Ypuh-like) P4Ha_N PF08336.6 gi|284167224|ref|YP_003405502.1| - 0.065 13.0 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Phasin PF05597.6 gi|284167224|ref|YP_003405502.1| - 0.07 12.8 0.1 1.6 8.4 0.0 2.1 2 0 0 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) CorA PF01544.13 gi|284167224|ref|YP_003405502.1| - 0.098 11.6 0.6 0.11 11.5 0.4 1.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein HSBP1 PF06825.7 gi|284167224|ref|YP_003405502.1| - 0.27 10.8 3.6 0.49 9.9 0.1 3.0 2 1 1 3 3 2 0 Heat shock factor binding protein 1 HalX PF08663.5 gi|284167224|ref|YP_003405502.1| - 0.48 10.4 2.2 2.3 8.2 0.1 2.2 2 0 0 2 2 2 0 HalX domain HTH_11 PF08279.7 gi|284167226|ref|YP_003405504.1| - 8.2e-06 25.3 1.0 2.5e-05 23.8 0.2 2.1 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.1 gi|284167226|ref|YP_003405504.1| - 2.7e-05 23.4 0.9 0.00021 20.6 0.2 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GntR PF00392.16 gi|284167226|ref|YP_003405504.1| - 0.00032 20.0 2.6 0.00061 19.1 0.2 2.8 5 0 0 5 5 5 1 Bacterial regulatory proteins, gntR family HTH_23 PF13384.1 gi|284167226|ref|YP_003405504.1| - 0.00061 19.3 1.9 0.0075 15.8 0.4 3.0 3 0 0 3 3 3 1 Homeodomain-like domain HTH_36 PF13730.1 gi|284167226|ref|YP_003405504.1| - 0.011 15.8 0.1 0.029 14.5 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain MerR PF00376.18 gi|284167226|ref|YP_003405504.1| - 0.014 14.9 0.3 0.035 13.6 0.2 1.7 1 0 0 1 1 1 0 MerR family regulatory protein HTH_3 PF01381.17 gi|284167226|ref|YP_003405504.1| - 0.017 14.9 0.3 0.33 10.8 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix MarR_2 PF12802.2 gi|284167226|ref|YP_003405504.1| - 0.017 14.7 2.8 0.019 14.6 0.2 2.5 3 0 0 3 3 3 0 MarR family HTH_31 PF13560.1 gi|284167226|ref|YP_003405504.1| - 0.021 15.0 5.9 0.11 12.6 1.4 3.6 3 1 0 3 3 2 0 Helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|284167226|ref|YP_003405504.1| - 0.022 14.2 4.1 0.096 12.2 1.1 2.6 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain MerR_1 PF13411.1 gi|284167226|ref|YP_003405504.1| - 0.024 14.3 0.1 0.06 13.1 0.0 1.7 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_28 PF13518.1 gi|284167226|ref|YP_003405504.1| - 0.36 10.8 2.6 0.34 10.9 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain GlcNAc_2-epim PF07221.6 gi|284167227|ref|YP_003405505.1| - 6e-76 255.6 1.3 7.3e-76 255.4 0.9 1.0 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Aldo_ket_red PF00248.16 gi|284167228|ref|YP_003405506.1| - 3.6e-63 213.0 0.0 4.3e-63 212.7 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Response_reg PF00072.19 gi|284167229|ref|YP_003405507.1| - 6.7e-13 48.6 0.0 8e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain TrmB PF01978.14 gi|284167230|ref|YP_003405508.1| - 3.7e-16 58.5 0.0 5e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.11 gi|284167230|ref|YP_003405508.1| - 1.2e-05 25.4 0.1 1.5e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.5 gi|284167230|ref|YP_003405508.1| - 5.7e-05 22.6 0.0 0.00011 21.6 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|284167230|ref|YP_003405508.1| - 0.00014 21.5 0.1 0.00033 20.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|284167230|ref|YP_003405508.1| - 0.00053 19.5 0.0 0.00092 18.8 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.1 gi|284167230|ref|YP_003405508.1| - 0.0026 18.0 0.0 0.0041 17.3 0.0 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|284167230|ref|YP_003405508.1| - 0.0028 17.4 0.0 0.005 16.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|284167230|ref|YP_003405508.1| - 0.0039 16.5 0.0 0.0065 15.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|284167230|ref|YP_003405508.1| - 0.0044 16.6 0.0 0.0075 15.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_38 PF13936.1 gi|284167230|ref|YP_003405508.1| - 0.0081 15.6 0.0 0.016 14.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain RuvB_C PF05491.8 gi|284167230|ref|YP_003405508.1| - 0.0082 15.7 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB C-terminus 2OG-Fe_Oxy_2 PF10014.4 gi|284167230|ref|YP_003405508.1| - 0.016 14.5 0.2 0.021 14.2 0.1 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase HTH_23 PF13384.1 gi|284167230|ref|YP_003405508.1| - 0.053 13.2 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain UMPH-1 PF05822.7 gi|284167230|ref|YP_003405508.1| - 0.054 12.8 0.1 0.064 12.5 0.1 1.3 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) HTH_29 PF13551.1 gi|284167230|ref|YP_003405508.1| - 0.059 13.5 0.0 0.081 13.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Rio2_N PF09202.6 gi|284167230|ref|YP_003405508.1| - 0.097 12.7 0.4 0.38 10.8 0.3 1.9 1 1 0 1 1 1 0 Rio2, N-terminal Rrf2 PF02082.15 gi|284167230|ref|YP_003405508.1| - 0.12 12.5 0.0 0.35 11.0 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PqqD PF05402.7 gi|284167230|ref|YP_003405508.1| - 0.24 11.4 1.5 88 3.2 0.0 3.2 2 1 1 3 3 3 0 Coenzyme PQQ synthesis protein D (PqqD) TIM-br_sig_trns PF09370.5 gi|284167231|ref|YP_003405509.1| - 1.7e-131 437.1 0.1 2e-131 436.9 0.1 1.0 1 0 0 1 1 1 1 TIM-barrel signal transduction protein NMO PF03060.10 gi|284167231|ref|YP_003405509.1| - 0.0048 16.0 0.1 0.0081 15.3 0.1 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase Amidohydro_2 PF04909.9 gi|284167231|ref|YP_003405509.1| - 0.084 12.4 0.1 0.13 11.7 0.1 1.4 1 1 0 1 1 1 0 Amidohydrolase AcylCoA_dehyd_C PF12186.3 gi|284167231|ref|YP_003405509.1| - 0.084 12.7 0.1 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal Cupin_2 PF07883.6 gi|284167232|ref|YP_003405510.1| - 2.4e-19 68.6 1.2 3.6e-19 68.0 0.8 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 gi|284167232|ref|YP_003405510.1| - 5.3e-09 35.6 0.0 7.1e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|284167232|ref|YP_003405510.1| - 1.2e-07 31.0 0.3 2e-07 30.2 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) AraC_binding PF02311.14 gi|284167232|ref|YP_003405510.1| - 1.4e-07 31.3 0.0 1.9e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|284167232|ref|YP_003405510.1| - 1.6e-05 24.6 0.0 2e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|284167232|ref|YP_003405510.1| - 9.6e-05 22.2 0.0 0.00014 21.7 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_7 PF12973.2 gi|284167232|ref|YP_003405510.1| - 0.00026 20.7 0.1 0.0004 20.1 0.1 1.3 1 0 0 1 1 1 1 ChrR Cupin-like domain GPI PF06560.6 gi|284167232|ref|YP_003405510.1| - 0.0021 17.0 0.0 0.0038 16.2 0.0 1.3 1 1 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Pirin_C PF05726.8 gi|284167232|ref|YP_003405510.1| - 0.011 15.7 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain Cupin_6 PF12852.2 gi|284167232|ref|YP_003405510.1| - 0.019 14.6 0.0 0.027 14.1 0.0 1.3 1 1 0 1 1 1 0 Cupin CDO_I PF05995.7 gi|284167232|ref|YP_003405510.1| - 0.029 13.5 0.1 0.05 12.7 0.0 1.5 1 1 0 1 1 1 0 Cysteine dioxygenase type I ARD PF03079.9 gi|284167232|ref|YP_003405510.1| - 0.05 13.5 0.1 0.075 12.9 0.1 1.2 1 0 0 1 1 1 0 ARD/ARD' family UPF0261 PF06792.6 gi|284167233|ref|YP_003405511.1| - 2e-173 576.5 5.4 2.3e-173 576.3 3.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0261) Mago_nashi PF02792.9 gi|284167235|ref|YP_003405513.1| - 0.15 11.7 0.1 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Mago nashi protein SDF PF00375.13 gi|284167238|ref|YP_003405516.1| - 1.5e-113 379.4 37.3 1.7e-113 379.2 25.8 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family EMP70 PF02990.11 gi|284167238|ref|YP_003405516.1| - 6.2 5.1 9.6 4.4 5.6 2.2 2.2 2 0 0 2 2 2 0 Endomembrane protein 70 Methyltransf_18 PF12847.2 gi|284167240|ref|YP_003405518.1| - 1.9e-12 47.7 0.1 2.7e-12 47.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|284167240|ref|YP_003405518.1| - 2.7e-10 40.0 0.0 3.7e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|284167240|ref|YP_003405518.1| - 4.1e-10 40.0 0.0 5.3e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167240|ref|YP_003405518.1| - 4.4e-09 36.6 0.0 5.8e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167240|ref|YP_003405518.1| - 2e-07 30.8 0.0 2.7e-07 30.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|284167240|ref|YP_003405518.1| - 1.1e-06 28.6 0.1 1.7e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|284167240|ref|YP_003405518.1| - 5.2e-06 26.8 0.0 7.2e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|284167240|ref|YP_003405518.1| - 7.4e-06 25.2 0.0 1e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.9 gi|284167240|ref|YP_003405518.1| - 3.1e-05 23.4 0.0 4.1e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.6 gi|284167240|ref|YP_003405518.1| - 0.00024 20.6 0.0 0.00042 19.8 0.0 1.5 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) NodS PF05401.6 gi|284167240|ref|YP_003405518.1| - 0.00067 19.1 0.0 0.0008 18.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.14 gi|284167240|ref|YP_003405518.1| - 0.0024 17.4 0.0 0.0035 16.9 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.15 gi|284167240|ref|YP_003405518.1| - 0.0036 16.3 0.0 0.0048 15.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.8 gi|284167240|ref|YP_003405518.1| - 0.0081 15.3 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.13 gi|284167240|ref|YP_003405518.1| - 0.014 14.4 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_10 PF05971.7 gi|284167240|ref|YP_003405518.1| - 0.032 13.3 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF890) Linocin_M18 PF04454.7 gi|284167240|ref|YP_003405518.1| - 0.039 12.8 0.0 0.054 12.3 0.0 1.1 1 0 0 1 1 1 0 Encapsulating protein for peroxidase Methyltransf_4 PF02390.12 gi|284167240|ref|YP_003405518.1| - 0.12 11.4 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase Abhydrolase_6 PF12697.2 gi|284167241|ref|YP_003405519.1| - 2.8e-33 115.7 2.6 3.4e-33 115.4 1.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|284167241|ref|YP_003405519.1| - 6.2e-13 48.7 0.0 1.1e-11 44.7 0.0 2.1 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|284167241|ref|YP_003405519.1| - 9.5e-12 44.9 0.0 9.9e-07 28.5 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Ser_hydrolase PF06821.8 gi|284167241|ref|YP_003405519.1| - 0.005 16.4 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 2 Serine hydrolase Hydrolase_4 PF12146.3 gi|284167241|ref|YP_003405519.1| - 0.06 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Putative lysophospholipase Methyltransf_11 PF08241.7 gi|284167242|ref|YP_003405520.1| - 2.3e-19 69.6 0.0 5.4e-19 68.4 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|284167242|ref|YP_003405520.1| - 7.7e-19 67.7 0.0 1.9e-18 66.4 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|284167242|ref|YP_003405520.1| - 7.7e-18 64.5 0.0 9.8e-18 64.1 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167242|ref|YP_003405520.1| - 7.3e-12 45.8 0.1 3.4e-11 43.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167242|ref|YP_003405520.1| - 9e-11 41.7 0.0 1.1e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|284167242|ref|YP_003405520.1| - 4.2e-10 39.9 0.0 1.9e-09 37.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|284167242|ref|YP_003405520.1| - 3.4e-09 36.7 1.0 1.3e-08 34.8 0.2 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167242|ref|YP_003405520.1| - 4.9e-08 33.2 0.0 8.8e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|284167242|ref|YP_003405520.1| - 4.6e-05 23.0 0.1 7.5e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 CMAS PF02353.15 gi|284167242|ref|YP_003405520.1| - 6.4e-05 22.1 0.0 0.0001 21.5 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.14 gi|284167242|ref|YP_003405520.1| - 0.00017 21.2 0.0 0.00026 20.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.9 gi|284167242|ref|YP_003405520.1| - 0.00019 20.6 0.0 0.00026 20.2 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.9 gi|284167242|ref|YP_003405520.1| - 0.00025 20.4 0.1 0.00048 19.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|284167242|ref|YP_003405520.1| - 0.00045 19.4 0.0 0.00067 18.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|284167242|ref|YP_003405520.1| - 0.00069 18.7 0.0 0.001 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.10 gi|284167242|ref|YP_003405520.1| - 0.0061 15.9 0.2 0.011 15.1 0.2 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Met_10 PF02475.11 gi|284167242|ref|YP_003405520.1| - 0.0079 15.7 0.0 0.01 15.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein DREV PF05219.7 gi|284167242|ref|YP_003405520.1| - 0.026 13.4 0.0 0.032 13.1 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_4 PF02390.12 gi|284167242|ref|YP_003405520.1| - 0.055 12.5 0.0 0.1 11.6 0.0 1.4 1 1 0 1 1 1 0 Putative methyltransferase ADH_zinc_N PF00107.21 gi|284167242|ref|YP_003405520.1| - 0.091 12.3 0.7 0.96 9.0 0.2 2.5 2 1 0 2 2 2 0 Zinc-binding dehydrogenase tRNA_U5-meth_tr PF05958.6 gi|284167242|ref|YP_003405520.1| - 0.16 10.6 0.0 0.23 10.1 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_15 PF09445.5 gi|284167242|ref|YP_003405520.1| - 0.18 11.3 0.0 0.37 10.3 0.0 1.5 2 0 0 2 2 1 0 RNA cap guanine-N2 methyltransferase HTH_IclR PF09339.5 gi|284167243|ref|YP_003405521.1| - 0.017 14.6 0.0 0.033 13.7 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|284167243|ref|YP_003405521.1| - 0.021 14.4 0.0 0.043 13.4 0.0 1.4 1 0 0 1 1 1 0 MarR family Abhydrolase_6 PF12697.2 gi|284167244|ref|YP_003405522.1| - 4.4e-36 124.8 0.2 6e-36 124.4 0.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|284167244|ref|YP_003405522.1| - 1.4e-16 60.7 0.0 7.3e-15 55.1 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|284167244|ref|YP_003405522.1| - 2.2e-16 59.9 0.0 5.6e-16 58.6 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|284167244|ref|YP_003405522.1| - 4.7e-05 23.1 0.4 0.00013 21.7 0.3 1.8 1 0 0 1 1 1 1 Putative lysophospholipase Thioesterase PF00975.15 gi|284167244|ref|YP_003405522.1| - 0.00011 22.4 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.2 gi|284167245|ref|YP_003405523.1| - 6.2e-42 144.0 0.0 7.1e-42 143.8 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|284167245|ref|YP_003405523.1| - 5.6e-23 81.7 0.0 1.3e-21 77.2 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|284167245|ref|YP_003405523.1| - 1.2e-17 64.0 0.0 1.5e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|284167245|ref|YP_003405523.1| - 1.9e-05 24.4 0.1 9.3e-05 22.2 0.2 2.1 3 0 0 3 3 3 1 Putative lysophospholipase Thioesterase PF00975.15 gi|284167245|ref|YP_003405523.1| - 0.0081 16.4 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_2 PF02230.11 gi|284167245|ref|YP_003405523.1| - 0.041 13.3 0.3 2.3 7.6 0.0 2.8 2 1 1 3 3 3 0 Phospholipase/Carboxylesterase DUF915 PF06028.6 gi|284167245|ref|YP_003405523.1| - 0.2 10.6 0.0 0.57 9.2 0.0 1.6 1 1 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) HTH_Crp_2 PF13545.1 gi|284167246|ref|YP_003405524.1| - 1.5e-05 24.7 0.0 2.9e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|284167246|ref|YP_003405524.1| - 3.4e-05 23.4 0.0 7e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|284167246|ref|YP_003405524.1| - 0.00023 20.5 0.0 0.00037 19.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF1724 PF08350.5 gi|284167246|ref|YP_003405524.1| - 0.00031 20.2 0.0 0.00052 19.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) TrmB PF01978.14 gi|284167246|ref|YP_003405524.1| - 0.00048 19.7 0.0 0.00084 18.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|284167246|ref|YP_003405524.1| - 0.00052 20.2 0.1 0.0011 19.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_28 PF13518.1 gi|284167246|ref|YP_003405524.1| - 0.00082 19.3 0.3 0.0021 18.0 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|284167246|ref|YP_003405524.1| - 0.0028 17.1 0.0 0.0048 16.4 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|284167246|ref|YP_003405524.1| - 0.0044 16.7 0.0 0.0078 15.8 0.0 1.4 1 0 0 1 1 1 1 MarR family Trp_repressor PF01371.14 gi|284167246|ref|YP_003405524.1| - 0.0096 15.8 0.1 0.021 14.7 0.1 1.5 1 0 0 1 1 1 1 Trp repressor protein HTH_7 PF02796.10 gi|284167246|ref|YP_003405524.1| - 0.016 15.0 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_45 PF14947.1 gi|284167246|ref|YP_003405524.1| - 0.027 14.2 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix GntR PF00392.16 gi|284167246|ref|YP_003405524.1| - 0.039 13.3 0.0 0.092 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family PaaX PF07848.7 gi|284167246|ref|YP_003405524.1| - 0.042 13.8 0.1 3.7 7.6 0.0 3.0 3 0 0 3 3 3 0 PaaX-like protein HTH_26 PF13443.1 gi|284167246|ref|YP_003405524.1| - 0.045 13.9 0.0 0.081 13.1 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_AsnC-type PF13404.1 gi|284167246|ref|YP_003405524.1| - 0.071 12.6 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain ArsR PF09824.4 gi|284167246|ref|YP_003405524.1| - 0.071 12.4 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 ArsR transcriptional regulator HTH_Tnp_ISL3 PF13542.1 gi|284167246|ref|YP_003405524.1| - 0.08 12.1 0.1 0.31 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF1330 PF07045.6 gi|284167247|ref|YP_003405525.1| - 2.9e-15 55.8 0.0 4.6e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1330) TAT_signal PF10518.4 gi|284167247|ref|YP_003405525.1| - 0.057 13.4 3.9 0.11 12.5 2.7 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Copper-bind PF00127.15 gi|284167249|ref|YP_003405527.1| - 2.1e-19 69.5 0.0 3e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|284167249|ref|YP_003405527.1| - 3.6e-06 26.7 0.6 4.9e-05 23.1 0.4 2.0 1 1 0 1 1 1 1 Cupredoxin-like domain TAT_signal PF10518.4 gi|284167249|ref|YP_003405527.1| - 0.017 15.0 0.4 0.03 14.3 0.3 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PKD PF00801.15 gi|284167249|ref|YP_003405527.1| - 0.18 11.5 1.3 7.9 6.3 0.0 2.2 2 0 0 2 2 2 0 PKD domain Zip PF02535.17 gi|284167250|ref|YP_003405528.1| - 2.4e-08 33.3 21.2 1.2e-07 31.0 6.7 2.5 1 1 1 2 2 2 2 ZIP Zinc transporter DUF3992 PF13157.1 gi|284167250|ref|YP_003405528.1| - 0.096 12.8 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) DUF347 PF03988.7 gi|284167250|ref|YP_003405528.1| - 0.67 9.8 0.0 0.67 9.8 0.0 4.8 6 0 0 6 6 6 0 Repeat of Unknown Function (DUF347) Cu-oxidase_3 PF07732.10 gi|284167251|ref|YP_003405529.1| - 4.5e-21 74.7 0.8 9.7e-21 73.6 0.1 1.9 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|284167251|ref|YP_003405529.1| - 3.6e-12 45.9 4.5 5.1e-05 22.7 0.2 3.3 3 0 0 3 3 3 3 Multicopper oxidase TAT_signal PF10518.4 gi|284167251|ref|YP_003405529.1| - 0.17 11.9 3.6 0.28 11.2 2.5 1.3 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence AMP-binding PF00501.23 gi|284167252|ref|YP_003405530.1| - 2.9e-92 309.2 0.2 3.4e-92 309.0 0.2 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167252|ref|YP_003405530.1| - 4.3e-18 66.0 0.1 1.1e-17 64.7 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain HTH_24 PF13412.1 gi|284167253|ref|YP_003405531.1| - 4.9e-06 25.8 0.1 7.6e-06 25.2 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|284167253|ref|YP_003405531.1| - 7.9e-06 25.4 0.2 1.3e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.1 gi|284167253|ref|YP_003405531.1| - 3.8e-05 23.1 0.1 7.7e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain GntR PF00392.16 gi|284167253|ref|YP_003405531.1| - 7.9e-05 22.0 0.1 0.00014 21.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MerR PF00376.18 gi|284167253|ref|YP_003405531.1| - 0.00095 18.6 0.1 0.0037 16.7 0.1 2.0 1 1 0 1 1 1 1 MerR family regulatory protein HTH_3 PF01381.17 gi|284167253|ref|YP_003405531.1| - 0.0026 17.5 0.0 0.005 16.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_AsnC-type PF13404.1 gi|284167253|ref|YP_003405531.1| - 0.0031 17.0 0.6 0.0031 17.0 0.4 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_31 PF13560.1 gi|284167253|ref|YP_003405531.1| - 0.0036 17.4 0.2 0.0091 16.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MerR_1 PF13411.1 gi|284167253|ref|YP_003405531.1| - 0.0045 16.7 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_28 PF13518.1 gi|284167253|ref|YP_003405531.1| - 0.0094 15.9 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_int_SAM_1 PF02899.12 gi|284167253|ref|YP_003405531.1| - 0.013 15.6 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain HTH_36 PF13730.1 gi|284167253|ref|YP_003405531.1| - 0.013 15.5 0.0 0.022 14.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.2 gi|284167253|ref|YP_003405531.1| - 0.021 14.5 0.1 0.036 13.7 0.1 1.4 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.1 gi|284167253|ref|YP_003405531.1| - 0.031 14.0 0.2 0.056 13.2 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_38 PF13936.1 gi|284167253|ref|YP_003405531.1| - 0.033 13.7 0.2 0.056 13.0 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Trp_repressor PF01371.14 gi|284167253|ref|YP_003405531.1| - 0.059 13.2 0.1 0.26 11.2 0.0 1.9 2 0 0 2 2 2 0 Trp repressor protein LacI PF00356.16 gi|284167253|ref|YP_003405531.1| - 0.071 12.7 0.0 0.27 10.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family FaeA PF04703.7 gi|284167253|ref|YP_003405531.1| - 0.085 13.0 0.1 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein Sigma70_r4_2 PF08281.7 gi|284167253|ref|YP_003405531.1| - 0.11 11.9 0.0 0.29 10.6 0.0 1.7 1 1 1 2 2 2 0 Sigma-70, region 4 HTH_Tnp_1 PF01527.15 gi|284167253|ref|YP_003405531.1| - 0.13 12.2 0.0 0.26 11.2 0.0 1.6 2 0 0 2 2 1 0 Transposase HTH_DeoR PF08220.7 gi|284167253|ref|YP_003405531.1| - 0.14 11.7 0.2 0.23 11.0 0.2 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Aldedh PF00171.17 gi|284167255|ref|YP_003405533.1| - 4.5e-165 549.4 0.0 5.1e-165 549.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Glyco_hydro_31 PF01055.21 gi|284167256|ref|YP_003405534.1| - 1.6e-145 485.3 7.3 2.1e-145 484.9 5.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.1 gi|284167256|ref|YP_003405534.1| - 7.4e-21 73.7 1.4 1.9e-20 72.4 1.0 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PIN_4 PF13638.1 gi|284167257|ref|YP_003405535.1| - 0.014 15.4 0.0 0.016 15.2 0.0 1.4 1 1 0 1 1 1 0 PIN domain PSK_trans_fac PF07704.6 gi|284167258|ref|YP_003405536.1| - 0.0057 17.3 2.1 0.033 14.8 1.5 1.9 1 1 0 1 1 1 1 Rv0623-like transcription factor Lipase_chap PF03280.9 gi|284167258|ref|YP_003405536.1| - 0.0093 15.5 0.9 0.0095 15.4 0.6 1.1 1 0 0 1 1 1 1 Proteobacterial lipase chaperone protein Exo_endo_phos PF03372.18 gi|284167258|ref|YP_003405536.1| - 0.16 11.8 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Pyr_redox_3 PF13738.1 gi|284167259|ref|YP_003405537.1| - 5.7e-33 114.6 0.0 1.5e-31 110.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.1 gi|284167259|ref|YP_003405537.1| - 6.9e-15 54.7 0.0 2.8e-13 49.4 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 gi|284167259|ref|YP_003405537.1| - 5.6e-11 41.9 1.4 0.00019 20.4 0.0 3.6 4 0 0 4 4 4 3 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167259|ref|YP_003405537.1| - 1.5e-07 31.3 0.5 1.2e-06 28.4 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|284167259|ref|YP_003405537.1| - 1.5e-07 31.4 0.0 9.5e-07 28.8 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.19 gi|284167259|ref|YP_003405537.1| - 4.3e-07 29.3 0.1 0.0081 15.2 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.1 gi|284167259|ref|YP_003405537.1| - 4.5e-06 26.5 2.6 0.0003 20.6 0.1 3.2 3 1 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.9 gi|284167259|ref|YP_003405537.1| - 4.8e-06 25.3 0.1 0.058 11.8 0.0 2.9 3 0 0 3 3 3 2 HI0933-like protein FMO-like PF00743.14 gi|284167259|ref|YP_003405537.1| - 2.4e-05 22.7 0.0 0.00013 20.3 0.0 2.3 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like Pyr_redox PF00070.22 gi|284167259|ref|YP_003405537.1| - 3.3e-05 24.1 0.0 0.53 10.7 0.0 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|284167259|ref|YP_003405537.1| - 0.00022 20.4 0.1 0.097 11.7 0.0 2.2 2 0 0 2 2 2 2 Thi4 family Lycopene_cycl PF05834.7 gi|284167259|ref|YP_003405537.1| - 0.006 15.5 2.1 3.1 6.6 0.0 3.0 2 1 0 2 2 2 2 Lycopene cyclase protein FAD_binding_2 PF00890.19 gi|284167259|ref|YP_003405537.1| - 0.0062 15.4 4.8 0.036 12.9 0.0 3.0 3 1 0 4 4 4 1 FAD binding domain FAD_binding_3 PF01494.14 gi|284167259|ref|YP_003405537.1| - 0.014 14.4 0.3 1.1 8.2 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.17 gi|284167259|ref|YP_003405537.1| - 0.062 12.1 0.8 4.5 6.0 0.2 2.4 2 0 0 2 2 2 0 Glucose inhibited division protein A HTH_24 PF13412.1 gi|284167260|ref|YP_003405538.1| - 5.2e-06 25.7 0.0 8.6e-06 25.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|284167260|ref|YP_003405538.1| - 1.7e-05 24.5 1.3 3.4e-05 23.5 0.9 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|284167260|ref|YP_003405538.1| - 8.4e-05 22.1 0.1 0.00015 21.3 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.5 gi|284167260|ref|YP_003405538.1| - 0.00035 20.0 0.6 0.00075 19.0 0.1 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_DeoR PF08220.7 gi|284167260|ref|YP_003405538.1| - 0.01 15.3 0.8 0.018 14.5 0.5 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|284167260|ref|YP_003405538.1| - 0.012 15.3 0.4 0.024 14.4 0.3 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|284167260|ref|YP_003405538.1| - 0.013 15.1 0.5 0.025 14.2 0.4 1.4 1 0 0 1 1 1 0 MarR family TrmB PF01978.14 gi|284167260|ref|YP_003405538.1| - 0.014 15.1 0.0 0.028 14.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|284167260|ref|YP_003405538.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 MarR family GntR PF00392.16 gi|284167260|ref|YP_003405538.1| - 0.11 11.9 0.7 0.41 10.1 0.2 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HU-DNA_bdg PF14848.1 gi|284167260|ref|YP_003405538.1| - 0.17 11.6 0.0 0.45 10.2 0.0 1.7 2 0 0 2 2 2 0 DNA-binding domain FAD_binding_4 PF01565.18 gi|284167261|ref|YP_003405539.1| - 1.3e-34 118.6 4.9 4.5e-34 116.9 2.6 2.3 2 0 0 2 2 2 1 FAD binding domain SnoaL PF07366.7 gi|284167261|ref|YP_003405539.1| - 2.9e-15 55.9 0.0 1.1e-14 54.1 0.0 1.9 2 0 0 2 2 2 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.2 gi|284167261|ref|YP_003405539.1| - 4.5e-13 49.4 1.7 4.4e-12 46.2 0.3 2.8 2 0 0 2 2 2 1 SnoaL-like domain BBE PF08031.7 gi|284167261|ref|YP_003405539.1| - 2.5e-08 33.7 0.1 8.6e-08 31.9 0.0 2.0 2 0 0 2 2 2 1 Berberine and berberine like SnoaL_3 PF13474.1 gi|284167261|ref|YP_003405539.1| - 0.00034 20.6 0.1 0.0016 18.4 0.1 2.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|284167261|ref|YP_003405539.1| - 0.00054 20.1 0.2 0.0014 18.8 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) NTF2 PF02136.15 gi|284167261|ref|YP_003405539.1| - 0.067 13.5 0.0 0.19 12.0 0.0 1.7 2 0 0 2 2 2 0 Nuclear transport factor 2 (NTF2) domain SBF PF01758.11 gi|284167262|ref|YP_003405540.1| - 1.3e-16 60.5 11.3 1.3e-16 60.5 7.8 2.4 1 1 1 2 2 2 1 Sodium Bile acid symporter family Glutaredoxin PF00462.19 gi|284167263|ref|YP_003405541.1| - 4.3e-05 23.4 0.0 4.3e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.1 gi|284167263|ref|YP_003405541.1| - 0.00022 21.3 0.0 0.00023 21.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain ArsC PF03960.10 gi|284167263|ref|YP_003405541.1| - 0.034 14.2 0.0 0.037 14.1 0.0 1.1 1 0 0 1 1 1 0 ArsC family Dpy19 PF10034.4 gi|284167263|ref|YP_003405541.1| - 0.053 11.6 0.0 0.053 11.6 0.0 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation Rdx PF10262.4 gi|284167264|ref|YP_003405542.1| - 1.2e-14 54.0 0.0 1.3e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Rdx family Cache_1 PF02743.13 gi|284167264|ref|YP_003405542.1| - 0.17 11.4 0.3 8.7 5.9 0.0 2.1 1 1 1 2 2 2 0 Cache domain DUF1440 PF07274.7 gi|284167265|ref|YP_003405543.1| - 0.15 12.0 0.6 0.19 11.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) DoxX PF07681.7 gi|284167266|ref|YP_003405544.1| - 7.7e-12 45.4 6.7 7.7e-12 45.4 4.7 1.4 2 0 0 2 2 2 1 DoxX DoxX_2 PF13564.1 gi|284167266|ref|YP_003405544.1| - 7.2e-05 22.7 8.6 0.0001 22.2 6.0 1.3 1 1 0 1 1 1 1 DoxX-like family DoxX_3 PF13781.1 gi|284167266|ref|YP_003405544.1| - 0.1 13.0 5.2 0.2 12.0 3.1 1.8 1 1 1 2 2 2 0 DoxX-like family HxlR PF01638.12 gi|284167267|ref|YP_003405545.1| - 3.3e-27 93.9 0.0 4.1e-27 93.6 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|284167267|ref|YP_003405545.1| - 0.0002 21.0 0.0 0.00036 20.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.17 gi|284167267|ref|YP_003405545.1| - 0.056 13.1 0.0 0.14 11.8 0.0 1.6 2 0 0 2 2 2 0 MarR family HTH_45 PF14947.1 gi|284167267|ref|YP_003405545.1| - 0.091 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix TrmB PF01978.14 gi|284167267|ref|YP_003405545.1| - 0.1 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Na_Ca_ex PF01699.19 gi|284167269|ref|YP_003405547.1| - 3.7e-35 120.5 24.4 1.2e-17 63.8 3.6 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein GlpM PF06942.7 gi|284167269|ref|YP_003405547.1| - 0.085 13.1 0.2 0.085 13.1 0.2 2.6 3 0 0 3 3 3 0 GlpM protein DUF3317 PF11779.3 gi|284167269|ref|YP_003405547.1| - 2.9 7.4 0.0 2.9 7.4 0.0 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF3317) HpcH_HpaI PF03328.9 gi|284167271|ref|YP_003405549.1| - 1.3e-47 161.5 0.5 1.6e-47 161.2 0.4 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family GDPD_2 PF13653.1 gi|284167271|ref|YP_003405549.1| - 0.051 13.7 0.0 0.44 10.8 0.0 2.5 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family PEP_mutase PF13714.1 gi|284167271|ref|YP_003405549.1| - 0.053 12.7 0.9 0.75 8.9 0.0 2.6 2 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase ELFV_dehydrog PF00208.16 gi|284167273|ref|YP_003405551.1| - 1.5e-70 237.6 0.2 1.9e-70 237.2 0.2 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|284167273|ref|YP_003405551.1| - 1.4e-52 176.7 0.0 2.5e-52 175.9 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.14 gi|284167273|ref|YP_003405551.1| - 0.00015 20.9 0.0 0.0003 19.9 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Na_H_antiporter PF03553.9 gi|284167274|ref|YP_003405552.1| - 4.1e-53 180.3 47.8 8.3e-52 176.0 17.3 2.1 1 1 1 2 2 2 2 Na+/H+ antiporter family Lyase_aromatic PF00221.14 gi|284167275|ref|YP_003405553.1| - 1.2e-180 601.0 4.7 1.4e-180 600.8 3.3 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase Amidohydro_4 PF13147.1 gi|284167276|ref|YP_003405554.1| - 2.2e-17 63.9 9.9 4.4e-16 59.7 6.8 2.3 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|284167276|ref|YP_003405554.1| - 7.4e-17 60.9 0.1 2.7e-16 59.1 0.1 2.0 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|284167276|ref|YP_003405554.1| - 1.9e-13 50.8 0.8 6.1e-12 45.8 0.5 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.6 gi|284167276|ref|YP_003405554.1| - 0.0019 17.4 10.8 0.039 13.1 0.6 3.3 1 1 1 2 2 2 2 Amidohydrolase family Arginase PF00491.16 gi|284167277|ref|YP_003405555.1| - 1e-58 198.8 1.0 1.1e-58 198.7 0.7 1.0 1 0 0 1 1 1 1 Arginase family GGDN PF05165.7 gi|284167277|ref|YP_003405555.1| - 0.0014 17.7 0.1 0.0022 17.1 0.0 1.3 1 0 0 1 1 1 1 GGDN family Urocanase PF01175.13 gi|284167278|ref|YP_003405556.1| - 3.6e-258 857.0 0.0 4.5e-258 856.7 0.0 1.0 1 0 0 1 1 1 1 Urocanase HTH_10 PF04967.7 gi|284167279|ref|YP_003405557.1| - 2e-16 59.2 0.0 3.3e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4_2 PF08281.7 gi|284167279|ref|YP_003405557.1| - 3.7e-07 29.5 0.1 0.0002 20.7 0.0 2.5 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r4 PF04545.11 gi|284167279|ref|YP_003405557.1| - 7.9e-05 21.8 0.1 0.00017 20.8 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.14 gi|284167279|ref|YP_003405557.1| - 8.6e-05 21.7 0.0 0.00045 19.4 0.0 2.1 1 1 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_23 PF13384.1 gi|284167279|ref|YP_003405557.1| - 0.0002 20.9 0.0 0.00045 19.7 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|284167279|ref|YP_003405557.1| - 0.0015 18.4 0.1 0.0076 16.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|284167279|ref|YP_003405557.1| - 0.0081 16.2 0.1 0.023 14.8 0.0 1.8 2 0 0 2 2 1 1 Winged helix-turn helix HTH_Crp_2 PF13545.1 gi|284167279|ref|YP_003405557.1| - 0.0087 15.8 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.2 gi|284167279|ref|YP_003405557.1| - 0.01 15.6 0.2 0.044 13.5 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_5 PF01022.15 gi|284167279|ref|YP_003405557.1| - 0.018 14.7 0.0 0.046 13.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Sigma70_ECF PF07638.6 gi|284167279|ref|YP_003405557.1| - 0.029 14.0 0.0 0.067 12.8 0.0 1.6 2 0 0 2 2 2 0 ECF sigma factor TetR_N PF00440.18 gi|284167279|ref|YP_003405557.1| - 0.03 13.9 0.0 0.069 12.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_24 PF13412.1 gi|284167279|ref|YP_003405557.1| - 0.046 13.1 0.0 0.083 12.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_17 PF12728.2 gi|284167279|ref|YP_003405557.1| - 0.063 13.5 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.1 gi|284167279|ref|YP_003405557.1| - 0.08 12.5 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.10 gi|284167279|ref|YP_003405557.1| - 0.092 12.6 0.2 0.23 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Sod_Fe_C PF02777.13 gi|284167280|ref|YP_003405558.1| - 5.2e-35 119.4 0.5 8.7e-35 118.7 0.3 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|284167280|ref|YP_003405558.1| - 6.6e-31 106.4 0.6 6.6e-31 106.4 0.4 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DDE_Tnp_IS240 PF13610.1 gi|284167282|ref|YP_003405560.1| - 1.9e-31 108.9 0.0 2.8e-31 108.3 0.0 1.3 1 0 0 1 1 1 1 DDE domain rve_3 PF13683.1 gi|284167282|ref|YP_003405560.1| - 2.4e-12 46.1 0.6 5e-12 45.1 0.4 1.5 1 0 0 1 1 1 1 Integrase core domain rve PF00665.21 gi|284167282|ref|YP_003405560.1| - 0.00037 20.5 0.1 0.00087 19.3 0.1 1.8 1 1 0 1 1 1 1 Integrase core domain DDE_Tnp_IS66 PF03050.9 gi|284167282|ref|YP_003405560.1| - 0.0018 17.5 0.0 0.0038 16.4 0.0 1.5 1 1 0 1 1 1 1 Transposase IS66 family rve_2 PF13333.1 gi|284167282|ref|YP_003405560.1| - 0.015 15.3 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 Integrase core domain DUF2384 PF09722.5 gi|284167282|ref|YP_003405560.1| - 0.025 14.4 0.6 3 7.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2384) Phage_int_SAM_4 PF13495.1 gi|284167283|ref|YP_003405561.1| - 0.05 13.9 0.0 0.08 13.2 0.0 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain PAS_9 PF13426.1 gi|284167284|ref|YP_003405562.1| - 2.9e-52 175.3 5.9 3.9e-16 59.3 0.0 5.4 5 0 0 5 5 5 5 PAS domain PAS_4 PF08448.5 gi|284167284|ref|YP_003405562.1| - 8.9e-48 160.9 24.7 5.5e-13 48.9 0.2 5.5 5 0 0 5 5 5 5 PAS fold PAS PF00989.19 gi|284167284|ref|YP_003405562.1| - 2.3e-34 117.5 5.1 3.2e-13 49.4 0.0 5.9 5 1 0 5 5 5 4 PAS fold HATPase_c PF02518.21 gi|284167284|ref|YP_003405562.1| - 2.3e-30 104.5 0.0 5.5e-30 103.3 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.6 gi|284167284|ref|YP_003405562.1| - 1.3e-26 92.5 6.6 3.4e-12 46.2 0.0 6.7 6 0 0 6 6 6 3 PAS fold PAS_8 PF13188.1 gi|284167284|ref|YP_003405562.1| - 8e-23 79.4 1.0 5.6e-06 26.0 0.0 5.6 5 0 0 5 5 5 3 PAS domain HisKA PF00512.20 gi|284167284|ref|YP_003405562.1| - 4.8e-11 42.4 0.1 4.8e-11 42.4 0.1 3.0 4 0 0 4 4 3 1 His Kinase A (phospho-acceptor) domain PAS_7 PF12860.2 gi|284167284|ref|YP_003405562.1| - 4e-10 39.7 11.2 0.003 17.5 0.1 5.8 4 3 0 5 5 5 3 PAS fold HATPase_c_5 PF14501.1 gi|284167284|ref|YP_003405562.1| - 1.2e-06 28.1 0.0 3.5e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 GHKL domain PAS_10 PF13596.1 gi|284167284|ref|YP_003405562.1| - 0.00018 21.7 0.0 0.11 12.7 0.0 4.3 5 0 0 5 5 5 1 PAS domain HATPase_c_2 PF13581.1 gi|284167284|ref|YP_003405562.1| - 0.0011 18.7 1.4 0.016 14.9 0.1 3.1 3 0 0 3 3 3 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|284167284|ref|YP_003405562.1| - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|284167284|ref|YP_003405562.1| - 0.023 14.6 0.0 0.17 11.8 0.0 2.2 2 0 0 2 2 2 0 PAS domain Gypsy PF07253.6 gi|284167284|ref|YP_003405562.1| - 0.31 9.3 0.0 0.56 8.4 0.0 1.3 1 0 0 1 1 1 0 Gypsy protein PIN PF01850.16 gi|284167285|ref|YP_003405563.1| - 1.4e-12 47.9 0.0 1.8e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 PIN domain DUF217 PF02697.9 gi|284167286|ref|YP_003405564.1| - 8.2e-06 25.9 0.6 1.1e-05 25.6 0.4 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 RHH_1 PF01402.16 gi|284167286|ref|YP_003405564.1| - 0.0042 16.9 0.4 0.0042 16.9 0.3 2.3 2 1 1 3 3 3 1 Ribbon-helix-helix protein, copG family WXG100 PF06013.7 gi|284167286|ref|YP_003405564.1| - 0.012 15.6 0.0 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Proteins of 100 residues with WXG RIB43A PF05914.7 gi|284167287|ref|YP_003405565.1| - 0.043 12.4 0.1 0.044 12.4 0.0 1.0 1 0 0 1 1 1 0 RIB43A PadR PF03551.9 gi|284167288|ref|YP_003405566.1| - 9.8e-12 44.4 0.4 1.2e-11 44.2 0.2 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|284167288|ref|YP_003405566.1| - 0.00053 19.7 0.2 0.00066 19.4 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DUF505 PF04458.7 gi|284167288|ref|YP_003405566.1| - 0.015 13.4 0.2 0.017 13.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_27 PF13463.1 gi|284167288|ref|YP_003405566.1| - 0.052 13.8 0.0 0.098 13.0 0.0 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain MotA_activ PF09114.5 gi|284167288|ref|YP_003405566.1| - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcription factor MotA, activation domain Arginase PF00491.16 gi|284167289|ref|YP_003405567.1| - 3.4e-75 252.9 0.7 4e-75 252.6 0.5 1.0 1 0 0 1 1 1 1 Arginase family DUF1173 PF06666.6 gi|284167289|ref|YP_003405567.1| - 0.17 10.6 0.0 0.25 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1173) Aminotran_3 PF00202.16 gi|284167290|ref|YP_003405568.1| - 3e-111 371.5 0.0 3.6e-111 371.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|284167290|ref|YP_003405568.1| - 1.2e-06 27.7 0.0 1.8e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aldedh PF00171.17 gi|284167291|ref|YP_003405569.1| - 4.3e-136 453.9 0.0 4.8e-136 453.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AsnC_trans_reg PF01037.16 gi|284167292|ref|YP_003405570.1| - 1.4e-09 37.5 0.2 2.3e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|284167292|ref|YP_003405570.1| - 4.6e-08 32.3 0.0 2.1e-07 30.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|284167292|ref|YP_003405570.1| - 7.1e-06 25.7 0.1 1.9e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|284167292|ref|YP_003405570.1| - 9.2e-06 25.1 0.0 1.9e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_5 PF01022.15 gi|284167292|ref|YP_003405570.1| - 4.3e-05 23.0 0.0 8.7e-05 22.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|284167292|ref|YP_003405570.1| - 0.00033 20.2 0.0 0.00092 18.8 0.0 1.8 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GYD PF08734.6 gi|284167292|ref|YP_003405570.1| - 0.0024 17.5 0.0 0.0061 16.2 0.0 1.7 2 0 0 2 2 2 1 GYD domain HTH_27 PF13463.1 gi|284167292|ref|YP_003405570.1| - 0.0063 16.8 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_AsnC-type PF13404.1 gi|284167292|ref|YP_003405570.1| - 0.0078 15.7 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.2 gi|284167292|ref|YP_003405570.1| - 0.037 13.7 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 MarR family B-block_TFIIIC PF04182.7 gi|284167292|ref|YP_003405570.1| - 0.083 12.7 0.0 0.25 11.2 0.0 1.6 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC DUF2250 PF10007.4 gi|284167292|ref|YP_003405570.1| - 0.098 12.5 0.1 0.23 11.3 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) OCD_Mu_crystall PF02423.10 gi|284167293|ref|YP_003405571.1| - 2.2e-94 315.7 3.0 2.4e-94 315.6 2.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.15 gi|284167293|ref|YP_003405571.1| - 0.0006 19.9 0.1 0.001 19.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Rnk_N PF14760.1 gi|284167293|ref|YP_003405571.1| - 0.033 14.2 0.1 2.3 8.3 0.0 2.4 2 0 0 2 2 2 0 Rnk N-terminus SOR_SNZ PF01680.12 gi|284167294|ref|YP_003405572.1| - 2.4e-102 340.8 9.2 3.2e-102 340.5 6.4 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|284167294|ref|YP_003405572.1| - 8e-10 38.2 6.9 1.9e-05 23.8 0.5 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|284167294|ref|YP_003405572.1| - 0.0014 17.5 2.2 0.32 9.7 0.0 2.2 1 1 0 2 2 2 2 Dihydrouridine synthase (Dus) IGPS PF00218.16 gi|284167294|ref|YP_003405572.1| - 0.0094 15.0 0.1 0.085 11.8 0.0 2.4 2 1 0 2 2 2 1 Indole-3-glycerol phosphate synthase OMPdecase PF00215.19 gi|284167294|ref|YP_003405572.1| - 0.019 14.3 0.2 0.29 10.5 0.2 2.2 1 1 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Myosin_tail_1 PF01576.14 gi|284167294|ref|YP_003405572.1| - 0.095 10.4 0.2 0.13 9.9 0.1 1.1 1 0 0 1 1 1 0 Myosin tail Aldedh PF00171.17 gi|284167295|ref|YP_003405573.1| - 7.3e-171 568.5 0.0 9.3e-171 568.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aminotran_3 PF00202.16 gi|284167296|ref|YP_003405574.1| - 3.3e-88 295.8 0.0 3.9e-88 295.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.16 gi|284167296|ref|YP_003405574.1| - 1.2e-05 24.5 0.0 2.5e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|284167296|ref|YP_003405574.1| - 0.011 14.6 0.0 0.25 10.2 0.0 2.1 2 0 0 2 2 2 0 Aminotransferase class I and II Na_H_antiporter PF03553.9 gi|284167297|ref|YP_003405575.1| - 5.1e-60 203.0 42.8 6.4e-60 202.7 16.7 2.6 1 1 1 2 2 2 2 Na+/H+ antiporter family MT PF12777.2 gi|284167297|ref|YP_003405575.1| - 0.06 12.0 0.0 0.091 11.4 0.0 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor AFOR_C PF01314.13 gi|284167300|ref|YP_003405578.1| - 2.3e-74 250.4 0.1 8.8e-74 248.4 0.1 1.8 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|284167300|ref|YP_003405578.1| - 4.6e-54 182.8 0.0 6.8e-54 182.2 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Multi_Drug_Res PF00893.14 gi|284167301|ref|YP_003405579.1| - 2.1e-27 95.4 5.1 2.6e-27 95.0 3.5 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.15 gi|284167301|ref|YP_003405579.1| - 0.1 12.6 10.4 0.19 11.7 7.2 1.5 1 1 0 1 1 1 0 EamA-like transporter family Bax1-I PF01027.15 gi|284167301|ref|YP_003405579.1| - 0.45 10.0 7.9 0.57 9.7 5.5 1.1 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 EmrE PF13536.1 gi|284167301|ref|YP_003405579.1| - 0.79 9.9 9.9 2.4 8.3 6.8 1.6 1 1 0 1 1 1 0 Multidrug resistance efflux transporter PsbN PF02468.10 gi|284167301|ref|YP_003405579.1| - 3 7.5 4.5 47 3.6 0.0 2.7 2 1 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) DUF3290 PF11694.3 gi|284167302|ref|YP_003405580.1| - 0.084 12.6 0.1 0.093 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) PadR PF03551.9 gi|284167305|ref|YP_003405583.1| - 6.3e-15 54.7 0.7 7.8e-15 54.4 0.5 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.1 gi|284167305|ref|YP_003405583.1| - 0.0034 17.6 0.0 0.004 17.4 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF1495 PF07381.6 gi|284167305|ref|YP_003405583.1| - 0.0088 15.6 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_45 PF14947.1 gi|284167305|ref|YP_003405583.1| - 0.0099 15.6 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.14 gi|284167305|ref|YP_003405583.1| - 0.078 12.7 0.1 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|284167305|ref|YP_003405583.1| - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|284167309|ref|YP_003405587.1| - 0.00059 19.5 0.1 0.0062 16.3 0.0 2.1 1 1 0 1 1 1 1 Helix-turn-helix domain PAS_4 PF08448.5 gi|284167310|ref|YP_003405588.1| - 7.1e-27 93.6 6.3 2.7e-11 43.4 0.1 5.2 5 0 0 5 5 5 3 PAS fold GAF_2 PF13185.1 gi|284167310|ref|YP_003405588.1| - 1.2e-21 77.7 2.9 1.4e-12 48.2 0.1 3.3 2 0 0 2 2 2 2 GAF domain PAS_9 PF13426.1 gi|284167310|ref|YP_003405588.1| - 4.6e-20 71.9 0.1 3.2e-08 33.8 0.0 4.1 4 0 0 4 4 3 3 PAS domain HTH_10 PF04967.7 gi|284167310|ref|YP_003405588.1| - 2.6e-17 62.1 0.0 6.7e-16 57.6 0.0 2.9 3 0 0 3 3 3 1 HTH DNA binding domain GAF_3 PF13492.1 gi|284167310|ref|YP_003405588.1| - 4.8e-14 52.5 0.2 4.2e-06 26.8 0.0 2.9 2 0 0 2 2 2 2 GAF domain PAS_3 PF08447.6 gi|284167310|ref|YP_003405588.1| - 1.7e-11 44.0 0.6 2e-08 34.1 0.1 3.2 3 0 0 3 3 2 1 PAS fold GAF PF01590.21 gi|284167310|ref|YP_003405588.1| - 2.2e-10 40.8 0.8 1.1e-06 28.8 0.0 3.5 3 0 0 3 3 3 2 GAF domain HTH_20 PF12840.2 gi|284167310|ref|YP_003405588.1| - 5.1e-08 32.6 0.1 2.9e-06 26.9 0.0 3.3 4 0 0 4 4 3 1 Helix-turn-helix domain PAS PF00989.19 gi|284167310|ref|YP_003405588.1| - 6.5e-05 22.6 0.0 0.028 14.1 0.0 2.9 2 0 0 2 2 2 1 PAS fold HTH_11 PF08279.7 gi|284167310|ref|YP_003405588.1| - 0.00028 20.4 0.0 0.00089 18.8 0.0 1.8 1 0 0 1 1 1 1 HTH domain PAS_8 PF13188.1 gi|284167310|ref|YP_003405588.1| - 0.00092 18.9 0.0 0.29 11.0 0.0 3.1 2 0 0 2 2 2 1 PAS domain HTH_24 PF13412.1 gi|284167310|ref|YP_003405588.1| - 0.0013 18.1 0.0 0.13 11.6 0.0 3.6 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|284167310|ref|YP_003405588.1| - 0.0061 16.2 0.0 2.6 7.7 0.0 2.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.1 gi|284167310|ref|YP_003405588.1| - 0.0076 15.8 0.0 0.04 13.5 0.0 2.2 2 0 0 2 2 1 1 Homeodomain-like domain TrmB PF01978.14 gi|284167310|ref|YP_003405588.1| - 0.012 15.3 0.0 0.096 12.4 0.0 2.5 3 0 0 3 3 2 0 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.11 gi|284167310|ref|YP_003405588.1| - 0.015 14.8 0.1 3.6 7.2 0.0 3.4 3 0 0 3 3 3 0 LexA DNA binding domain Sigma70_r4_2 PF08281.7 gi|284167310|ref|YP_003405588.1| - 0.023 14.1 0.2 0.88 9.0 0.0 3.1 3 0 0 3 3 3 0 Sigma-70, region 4 MarR_2 PF12802.2 gi|284167310|ref|YP_003405588.1| - 0.029 14.0 0.1 0.24 11.1 0.0 2.7 4 0 0 4 4 4 0 MarR family GerE PF00196.14 gi|284167310|ref|YP_003405588.1| - 0.21 10.9 0.0 17 4.8 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Mnd1 PF03962.10 gi|284167310|ref|YP_003405588.1| - 1.4 8.5 6.0 1.6 8.3 0.0 3.4 4 0 0 4 4 4 0 Mnd1 family DUF3470 PF11953.3 gi|284167311|ref|YP_003405589.1| - 0.087 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3470) Glyco_hydro_32N PF00251.15 gi|284167313|ref|YP_003405591.1| - 5.5e-142 472.6 12.7 1.4e-72 244.7 3.9 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 32 N-terminal domain RicinB_lectin_2 PF14200.1 gi|284167313|ref|YP_003405591.1| - 4.7e-30 104.0 16.8 3.3e-22 78.8 6.3 3.2 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like Laminin_G_3 PF13385.1 gi|284167313|ref|YP_003405591.1| - 1.2e-23 84.1 3.1 1.2e-23 84.1 2.2 5.4 3 2 1 4 4 4 1 Concanavalin A-like lectin/glucanases superfamily Glyco_hydro_32C PF08244.7 gi|284167313|ref|YP_003405591.1| - 1.8e-22 79.4 0.9 9.2e-12 45.1 0.1 2.7 2 0 0 2 2 2 2 Glycosyl hydrolases family 32 C terminal Glyco_hydro_43 PF04616.9 gi|284167313|ref|YP_003405591.1| - 4.6e-08 32.5 12.3 0.064 12.3 1.5 4.6 2 2 2 4 4 4 4 Glycosyl hydrolases family 43 PfkB PF00294.19 gi|284167314|ref|YP_003405592.1| - 6.4e-60 202.8 0.0 7.2e-60 202.6 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Pribosyltran PF00156.22 gi|284167315|ref|YP_003405593.1| - 1.9e-22 79.3 0.0 3.1e-22 78.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_7 PF02796.10 gi|284167315|ref|YP_003405593.1| - 0.001 18.8 0.0 0.013 15.3 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.1 gi|284167315|ref|YP_003405593.1| - 0.0021 17.6 0.0 0.0051 16.4 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.11 gi|284167315|ref|YP_003405593.1| - 0.012 14.9 0.1 0.022 14.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.7 gi|284167315|ref|YP_003405593.1| - 0.017 14.7 0.0 0.044 13.4 0.0 1.6 1 0 0 1 1 1 0 HTH domain HTH_24 PF13412.1 gi|284167315|ref|YP_003405593.1| - 0.025 13.9 0.0 0.057 12.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PRTase_2 PF15609.1 gi|284167315|ref|YP_003405593.1| - 0.025 13.8 0.2 0.19 10.9 0.1 1.9 1 1 0 1 1 1 0 Phosphoribosyl transferase HTH_31 PF13560.1 gi|284167315|ref|YP_003405593.1| - 0.032 14.4 0.5 0.24 11.6 0.1 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain UPRTase PF14681.1 gi|284167315|ref|YP_003405593.1| - 0.088 12.0 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase HTH_28 PF13518.1 gi|284167315|ref|YP_003405593.1| - 0.1 12.6 0.1 0.45 10.5 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain GerE PF00196.14 gi|284167315|ref|YP_003405593.1| - 0.14 11.4 0.0 0.24 10.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Fe_dep_repress PF01325.14 gi|284167315|ref|YP_003405593.1| - 0.16 11.9 0.1 11 6.0 0.0 3.0 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain Hydrolase_3 PF08282.7 gi|284167316|ref|YP_003405594.1| - 3.7e-11 43.0 0.0 0.00024 20.7 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|284167316|ref|YP_003405594.1| - 2.3e-05 24.6 0.1 0.00021 21.5 0.1 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|284167316|ref|YP_003405594.1| - 0.072 13.2 0.1 0.5 10.5 0.0 2.3 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Glyco_hydro_32N PF00251.15 gi|284167317|ref|YP_003405595.1| - 2e-67 227.7 0.0 2.5e-67 227.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 N-terminal domain Laminin_G_3 PF13385.1 gi|284167317|ref|YP_003405595.1| - 8.8e-24 84.5 0.5 4.3e-23 82.2 0.0 2.4 3 0 0 3 3 3 1 Concanavalin A-like lectin/glucanases superfamily Glyco_hydro_32C PF08244.7 gi|284167317|ref|YP_003405595.1| - 1.1e-14 54.5 0.1 2.3e-14 53.4 0.1 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 C terminal Laminin_G_2 PF02210.19 gi|284167317|ref|YP_003405595.1| - 1e-05 25.5 0.1 7.9e-05 22.7 0.0 2.4 2 0 0 2 2 2 1 Laminin G domain Regulator_TrmB PF11495.3 gi|284167318|ref|YP_003405596.1| - 1.4e-24 86.3 0.0 2.2e-24 85.7 0.0 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.14 gi|284167318|ref|YP_003405596.1| - 6.4e-18 64.2 0.6 1.8e-17 62.7 0.1 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|284167318|ref|YP_003405596.1| - 0.0003 20.1 0.0 0.00078 18.7 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|284167318|ref|YP_003405596.1| - 0.0026 17.3 0.1 0.047 13.3 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.5 gi|284167318|ref|YP_003405596.1| - 0.011 15.2 0.1 0.041 13.4 0.0 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.15 gi|284167318|ref|YP_003405596.1| - 0.023 14.8 0.0 0.062 13.4 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.1 gi|284167318|ref|YP_003405596.1| - 0.052 13.8 0.0 0.25 11.7 0.0 2.2 1 1 1 2 2 2 0 Winged helix DNA-binding domain HTH_28 PF13518.1 gi|284167318|ref|YP_003405596.1| - 0.14 12.2 0.0 1.6 8.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain PIRT PF15099.1 gi|284167319|ref|YP_003405597.1| - 0.011 14.9 0.5 0.014 14.6 0.4 1.2 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Caa3_CtaG PF09678.5 gi|284167319|ref|YP_003405597.1| - 0.023 13.6 2.3 0.027 13.3 1.6 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) FA_desaturase PF00487.19 gi|284167319|ref|YP_003405597.1| - 0.034 13.5 0.3 0.039 13.3 0.2 1.0 1 0 0 1 1 1 0 Fatty acid desaturase DUF2964 PF11177.3 gi|284167319|ref|YP_003405597.1| - 1.2 9.0 4.5 3.4 7.6 3.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2964) DUF2628 PF10947.3 gi|284167319|ref|YP_003405597.1| - 3 7.6 4.7 4.4 7.1 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) ABC_tran PF00005.22 gi|284167320|ref|YP_003405598.1| - 6.5e-51 172.2 0.0 9.2e-27 94.0 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.7 gi|284167320|ref|YP_003405598.1| - 3.8e-37 126.4 2.1 8e-20 70.9 0.1 2.5 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|284167320|ref|YP_003405598.1| - 1e-19 71.6 2.0 1.6e-09 38.1 0.0 4.1 2 2 2 4 4 4 2 AAA domain SMC_N PF02463.14 gi|284167320|ref|YP_003405598.1| - 6.5e-08 32.0 0.3 0.13 11.4 0.0 3.5 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|284167320|ref|YP_003405598.1| - 3.8e-07 30.2 5.8 0.012 15.8 0.1 3.9 2 2 0 2 2 2 2 AAA domain AAA_25 PF13481.1 gi|284167320|ref|YP_003405598.1| - 8.3e-07 28.5 0.0 0.0081 15.5 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_29 PF13555.1 gi|284167320|ref|YP_003405598.1| - 7.8e-06 25.3 0.1 0.17 11.4 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|284167320|ref|YP_003405598.1| - 8.4e-06 25.4 0.0 0.11 11.8 0.0 3.0 2 2 0 3 3 3 2 AAA-like domain NACHT PF05729.7 gi|284167320|ref|YP_003405598.1| - 3.3e-05 23.5 0.3 0.26 10.9 0.0 2.6 2 0 0 2 2 2 2 NACHT domain IstB_IS21 PF01695.12 gi|284167320|ref|YP_003405598.1| - 5.7e-05 22.6 0.0 0.82 9.0 0.0 3.3 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_16 PF13191.1 gi|284167320|ref|YP_003405598.1| - 7.6e-05 22.7 5.1 0.1 12.5 0.4 2.9 2 2 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|284167320|ref|YP_003405598.1| - 9.9e-05 21.5 0.1 0.091 11.9 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 NB-ARC PF00931.17 gi|284167320|ref|YP_003405598.1| - 0.00016 20.6 0.2 0.1 11.4 0.0 2.2 2 0 0 2 2 2 2 NB-ARC domain AAA_17 PF13207.1 gi|284167320|ref|YP_003405598.1| - 0.00018 22.3 1.2 0.24 12.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|284167320|ref|YP_003405598.1| - 0.00019 20.9 0.0 0.022 14.2 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family KaiC PF06745.8 gi|284167320|ref|YP_003405598.1| - 0.00036 19.7 0.1 0.46 9.5 0.0 2.6 2 0 0 2 2 2 2 KaiC AAA_23 PF13476.1 gi|284167320|ref|YP_003405598.1| - 0.00062 20.1 0.0 0.39 11.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.17 gi|284167320|ref|YP_003405598.1| - 0.00084 19.4 0.0 0.87 9.7 0.0 2.5 2 0 0 2 2 2 1 RNA helicase PhoH PF02562.11 gi|284167320|ref|YP_003405598.1| - 0.0013 17.9 0.0 0.64 9.2 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein AAA_33 PF13671.1 gi|284167320|ref|YP_003405598.1| - 0.0019 18.0 0.0 2.2 8.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|284167320|ref|YP_003405598.1| - 0.0024 18.1 0.0 1.3 9.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain SbcCD_C PF13558.1 gi|284167320|ref|YP_003405598.1| - 0.0041 16.9 0.9 4.2 7.3 0.5 3.3 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MobB PF03205.9 gi|284167320|ref|YP_003405598.1| - 0.0042 16.7 0.1 3.4 7.3 0.0 2.4 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B UPF0079 PF02367.12 gi|284167320|ref|YP_003405598.1| - 0.0046 16.5 0.1 0.79 9.3 0.0 2.3 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_15 PF13175.1 gi|284167320|ref|YP_003405598.1| - 0.007 15.4 0.0 0.38 9.7 0.0 2.4 3 0 0 3 3 2 1 AAA ATPase domain PRK PF00485.13 gi|284167320|ref|YP_003405598.1| - 0.012 15.1 0.4 3.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_5 PF07728.9 gi|284167320|ref|YP_003405598.1| - 0.014 15.1 0.9 6.7 6.4 0.2 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.12 gi|284167320|ref|YP_003405598.1| - 0.014 15.2 0.2 0.12 12.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF87 Sigma54_activat PF00158.21 gi|284167320|ref|YP_003405598.1| - 0.014 14.8 0.0 1.4 8.3 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain Miro PF08477.8 gi|284167320|ref|YP_003405598.1| - 0.019 15.4 0.0 3.1 8.3 0.0 2.4 2 0 0 2 2 2 0 Miro-like protein AAA_24 PF13479.1 gi|284167320|ref|YP_003405598.1| - 0.029 13.9 0.0 0.89 9.0 0.0 2.6 3 0 0 3 3 3 0 AAA domain ArgK PF03308.11 gi|284167320|ref|YP_003405598.1| - 0.036 12.8 0.1 0.45 9.2 0.0 2.0 2 0 0 2 2 2 0 ArgK protein ABC_ATPase PF09818.4 gi|284167320|ref|YP_003405598.1| - 0.052 12.1 0.0 1.9 6.9 0.0 2.5 2 0 0 2 2 2 0 Predicted ATPase of the ABC class T2SE PF00437.15 gi|284167320|ref|YP_003405598.1| - 0.053 12.4 0.1 2.1 7.1 0.0 2.6 3 0 0 3 3 3 0 Type II/IV secretion system protein Sigma54_activ_2 PF14532.1 gi|284167320|ref|YP_003405598.1| - 0.061 13.3 0.1 38 4.3 0.0 3.2 3 0 0 3 3 3 0 Sigma-54 interaction domain MMR_HSR1 PF01926.18 gi|284167320|ref|YP_003405598.1| - 0.064 13.2 0.0 11 5.9 0.0 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA PF00004.24 gi|284167320|ref|YP_003405598.1| - 0.068 13.3 0.4 4.5 7.4 0.1 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.7 gi|284167320|ref|YP_003405598.1| - 0.1 11.7 0.0 12 4.9 0.0 2.6 3 0 0 3 3 2 0 Zeta toxin Septin PF00735.13 gi|284167320|ref|YP_003405598.1| - 0.1 11.5 0.0 20 4.1 0.0 2.8 3 0 0 3 3 3 0 Septin BPD_transp_1 PF00528.17 gi|284167321|ref|YP_003405599.1| - 4.3e-22 78.5 10.3 4.3e-22 78.5 7.2 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|284167322|ref|YP_003405600.1| - 3.4e-35 121.2 16.1 3.4e-35 121.2 11.2 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Glyco_hydro_32N PF00251.15 gi|284167323|ref|YP_003405601.1| - 3.7e-81 272.8 0.4 4.8e-81 272.4 0.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 N-terminal domain Glyco_hydro_32C PF08244.7 gi|284167323|ref|YP_003405601.1| - 1.8e-13 50.6 0.2 3.8e-13 49.6 0.1 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 C terminal ThuA PF06283.6 gi|284167323|ref|YP_003405601.1| - 0.086 12.5 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Trehalose utilisation SBP_bac_5 PF00496.17 gi|284167324|ref|YP_003405602.1| - 4.5e-27 94.8 3.7 4.5e-27 94.8 2.5 1.5 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle Glyco_hydro_68 PF02435.11 gi|284167326|ref|YP_003405604.1| - 2.5e-88 296.6 1.0 1.5e-45 155.7 0.7 3.0 1 1 1 2 2 2 2 Levansucrase/Invertase TAT_signal PF10518.4 gi|284167326|ref|YP_003405604.1| - 0.014 15.3 3.0 0.041 13.9 2.1 1.8 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Regulator_TrmB PF11495.3 gi|284167327|ref|YP_003405605.1| - 7.5e-46 155.9 0.0 1e-45 155.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.14 gi|284167327|ref|YP_003405605.1| - 1.2e-09 37.7 0.0 2.9e-09 36.4 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|284167327|ref|YP_003405605.1| - 0.0022 17.6 0.0 0.0047 16.6 0.0 1.6 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|284167327|ref|YP_003405605.1| - 0.029 14.4 0.0 0.065 13.3 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.2 gi|284167327|ref|YP_003405605.1| - 0.037 13.7 0.0 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 MarR family HTH_45 PF14947.1 gi|284167327|ref|YP_003405605.1| - 0.061 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix Glyco_trans_1_3 PF13528.1 gi|284167327|ref|YP_003405605.1| - 0.099 11.8 0.0 0.14 11.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 1 HTH_Crp_2 PF13545.1 gi|284167327|ref|YP_003405605.1| - 0.1 12.4 0.0 0.25 11.1 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Usp PF00582.21 gi|284167328|ref|YP_003405606.1| - 1.9e-22 79.9 1.2 2.2e-22 79.7 0.8 1.1 1 0 0 1 1 1 1 Universal stress protein family AAA_26 PF13500.1 gi|284167328|ref|YP_003405606.1| - 0.084 12.4 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain Sugar_tr PF00083.19 gi|284167329|ref|YP_003405607.1| - 2.2e-128 428.6 28.2 2.5e-128 428.4 19.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|284167329|ref|YP_003405607.1| - 1e-39 136.2 42.8 6.2e-37 127.1 27.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.8 gi|284167329|ref|YP_003405607.1| - 1.2e-08 33.7 3.0 1.2e-08 33.7 2.1 2.1 2 0 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.1 gi|284167329|ref|YP_003405607.1| - 5.7e-06 24.9 29.8 0.00055 18.4 1.6 3.6 1 1 2 3 3 3 3 MFS/sugar transport protein DUF791 PF05631.9 gi|284167329|ref|YP_003405607.1| - 3.1e-05 22.8 1.5 3.1e-05 22.8 1.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF791) MFS_3 PF05977.8 gi|284167329|ref|YP_003405607.1| - 0.0027 15.9 4.1 0.0027 15.9 2.9 2.3 2 1 0 2 2 2 1 Transmembrane secretion effector TauE PF01925.14 gi|284167329|ref|YP_003405607.1| - 0.0072 15.8 10.1 0.0072 15.8 7.0 4.0 3 1 1 4 4 3 2 Sulfite exporter TauE/SafE BT1 PF03092.11 gi|284167329|ref|YP_003405607.1| - 0.021 13.5 9.6 0.025 13.2 0.8 2.5 1 1 0 2 2 2 0 BT1 family OATP PF03137.15 gi|284167329|ref|YP_003405607.1| - 0.061 11.3 0.0 0.061 11.3 0.0 2.4 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.2 gi|284167329|ref|YP_003405607.1| - 0.065 13.0 8.7 1.8 8.3 0.1 4.0 4 1 0 4 4 4 0 MFS_1 like family Gly-zipper_YMGG PF13441.1 gi|284167329|ref|YP_003405607.1| - 0.23 11.0 6.1 0.2 11.1 2.0 2.6 2 0 0 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_OmpA PF13436.1 gi|284167329|ref|YP_003405607.1| - 2.1 8.0 3.6 1.7 8.3 0.3 2.3 2 0 0 2 2 2 0 Glycine-zipper containing OmpA-like membrane domain Lyase_aromatic PF00221.14 gi|284167330|ref|YP_003405608.1| - 9.2e-169 561.8 6.9 1.2e-168 561.4 4.8 1.1 1 0 0 1 1 1 1 Aromatic amino acid lyase Amidohydro_1 PF01979.15 gi|284167331|ref|YP_003405609.1| - 3.8e-15 56.3 2.7 4e-13 49.7 1.9 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|284167331|ref|YP_003405609.1| - 8.1e-14 52.3 24.6 3.3e-13 50.3 17.1 2.1 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|284167331|ref|YP_003405609.1| - 5e-12 45.4 0.1 1.9e-11 43.5 0.1 2.0 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|284167331|ref|YP_003405609.1| - 1.4e-07 31.0 18.5 0.00038 19.7 9.6 2.3 1 1 1 2 2 2 2 Amidohydrolase family Arginase PF00491.16 gi|284167332|ref|YP_003405610.1| - 7.9e-58 195.9 0.8 9.2e-58 195.7 0.6 1.0 1 0 0 1 1 1 1 Arginase family FTR_C PF02741.10 gi|284167332|ref|YP_003405610.1| - 0.066 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 FTR, proximal lobe GGDN PF05165.7 gi|284167332|ref|YP_003405610.1| - 0.11 11.5 0.0 0.49 9.3 0.0 2.0 2 0 0 2 2 2 0 GGDN family Urocanase PF01175.13 gi|284167333|ref|YP_003405611.1| - 2.7e-254 844.2 1.0 3.8e-253 840.5 0.7 1.9 1 1 0 1 1 1 1 Urocanase DUF2457 PF10446.4 gi|284167334|ref|YP_003405612.1| - 3.7 6.1 18.6 4.5 5.8 12.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Daxx PF03344.10 gi|284167334|ref|YP_003405612.1| - 3.8 5.8 12.3 4.6 5.6 8.5 1.1 1 0 0 1 1 1 0 Daxx Family GAF_2 PF13185.1 gi|284167336|ref|YP_003405614.1| - 1.5e-22 80.6 5.7 1.3e-14 54.9 0.2 2.9 3 0 0 3 3 2 2 GAF domain HTH_10 PF04967.7 gi|284167336|ref|YP_003405614.1| - 1e-19 69.7 0.0 5.5e-19 67.4 0.0 2.2 2 0 0 2 2 2 1 HTH DNA binding domain PAS_3 PF08447.6 gi|284167336|ref|YP_003405614.1| - 1.5e-15 57.0 0.0 4.6e-15 55.4 0.0 1.9 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.1 gi|284167336|ref|YP_003405614.1| - 3.6e-14 52.9 0.1 1.2e-08 35.1 0.0 2.7 2 0 0 2 2 2 2 GAF domain GAF PF01590.21 gi|284167336|ref|YP_003405614.1| - 8.8e-11 42.1 0.4 2.4e-06 27.7 0.0 2.6 2 0 0 2 2 2 2 GAF domain PAS_9 PF13426.1 gi|284167336|ref|YP_003405614.1| - 1.5e-10 41.3 0.5 1.6e-06 28.4 0.0 3.9 3 1 1 4 4 4 2 PAS domain HTH_20 PF12840.2 gi|284167336|ref|YP_003405614.1| - 4.1e-08 32.9 0.0 0.0061 16.3 0.0 2.7 2 0 0 2 2 2 2 Helix-turn-helix domain PAS_4 PF08448.5 gi|284167336|ref|YP_003405614.1| - 3.3e-07 30.3 0.5 0.0079 16.2 0.0 3.8 3 1 0 3 3 3 2 PAS fold HTH_11 PF08279.7 gi|284167336|ref|YP_003405614.1| - 0.00039 20.0 0.0 0.14 11.8 0.0 2.5 2 0 0 2 2 2 1 HTH domain HTH_23 PF13384.1 gi|284167336|ref|YP_003405614.1| - 0.0017 17.9 0.0 0.3 10.8 0.0 2.8 2 0 0 2 2 2 1 Homeodomain-like domain MarR_2 PF12802.2 gi|284167336|ref|YP_003405614.1| - 0.0018 17.9 0.1 0.98 9.1 0.0 3.1 3 0 0 3 3 2 1 MarR family GerE PF00196.14 gi|284167336|ref|YP_003405614.1| - 0.0019 17.4 0.0 1.3 8.3 0.0 2.9 2 1 0 2 2 2 1 Bacterial regulatory proteins, luxR family PAS_8 PF13188.1 gi|284167336|ref|YP_003405614.1| - 0.0021 17.8 0.0 0.033 14.0 0.0 2.9 3 0 0 3 3 3 1 PAS domain HTH_5 PF01022.15 gi|284167336|ref|YP_003405614.1| - 0.0023 17.5 0.0 0.018 14.6 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|284167336|ref|YP_003405614.1| - 0.0047 16.2 0.0 0.022 14.1 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|284167336|ref|YP_003405614.1| - 0.012 15.3 0.0 0.19 11.4 0.0 2.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|284167336|ref|YP_003405614.1| - 0.026 14.8 0.0 1.9 8.8 0.0 3.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain Sigma70_r4 PF04545.11 gi|284167336|ref|YP_003405614.1| - 0.039 13.2 0.3 0.56 9.5 0.3 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 Homeobox PF00046.24 gi|284167336|ref|YP_003405614.1| - 0.055 13.0 0.0 0.17 11.5 0.0 1.8 1 0 0 1 1 1 0 Homeobox domain HTH_17 PF12728.2 gi|284167336|ref|YP_003405614.1| - 0.063 13.5 0.0 0.91 9.8 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.5 gi|284167336|ref|YP_003405614.1| - 0.065 12.8 0.0 2.5 7.7 0.0 2.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain PAS_6 PF08348.6 gi|284167336|ref|YP_003405614.1| - 0.11 12.0 0.0 0.3 10.6 0.0 1.7 2 0 0 2 2 1 0 YheO-like PAS domain HTH_22 PF13309.1 gi|284167336|ref|YP_003405614.1| - 0.15 11.8 0.0 3.5 7.4 0.0 2.7 2 0 0 2 2 2 0 HTH domain HTH_20 PF12840.2 gi|284167337|ref|YP_003405615.1| - 0.11 12.2 0.2 1.4 8.7 0.2 2.1 1 1 0 1 1 1 0 Helix-turn-helix domain GFO_IDH_MocA PF01408.17 gi|284167338|ref|YP_003405616.1| - 5.3e-26 91.4 0.1 9.1e-26 90.7 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|284167338|ref|YP_003405616.1| - 3e-10 39.9 0.0 5.2e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.19 gi|284167338|ref|YP_003405616.1| - 0.0037 17.5 0.0 0.0079 16.5 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain CbiA PF01656.18 gi|284167338|ref|YP_003405616.1| - 0.015 14.6 0.1 0.023 14.0 0.1 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Molybdopterin PF00384.17 gi|284167339|ref|YP_003405617.1| - 9.2e-64 215.7 0.0 1.2e-63 215.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|284167339|ref|YP_003405617.1| - 1.5e-10 40.8 0.1 3e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.11 gi|284167339|ref|YP_003405617.1| - 0.0025 17.6 3.3 0.0094 15.7 2.3 1.9 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain DUF1641 PF07849.6 gi|284167340|ref|YP_003405618.1| - 1.6e-05 24.4 0.0 3.4e-05 23.3 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1641) DUF4350 PF14258.1 gi|284167340|ref|YP_003405618.1| - 0.0028 17.8 2.2 0.61 10.3 0.1 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4350) ABC_transp_aux PF09822.4 gi|284167340|ref|YP_003405618.1| - 0.033 13.6 0.1 0.039 13.3 0.1 1.1 1 0 0 1 1 1 0 ABC-type uncharacterized transport system DED PF01335.16 gi|284167340|ref|YP_003405618.1| - 0.043 13.9 1.1 0.1 12.7 0.5 1.9 1 1 1 2 2 2 0 Death effector domain Xpo1 PF08389.7 gi|284167340|ref|YP_003405618.1| - 0.11 12.3 0.1 0.34 10.8 0.1 1.8 1 1 1 2 2 2 0 Exportin 1-like protein Molybdopterin PF00384.17 gi|284167341|ref|YP_003405619.1| - 1e-78 265.0 0.0 1.3e-78 264.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|284167341|ref|YP_003405619.1| - 3.2e-32 110.5 0.0 6.7e-32 109.5 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.11 gi|284167341|ref|YP_003405619.1| - 2.9e-12 46.2 0.1 5.4e-12 45.3 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_4 PF13510.1 gi|284167342|ref|YP_003405620.1| - 4.5e-22 77.6 1.2 1.2e-21 76.2 0.8 1.8 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NADH-G_4Fe-4S_3 PF10588.4 gi|284167342|ref|YP_003405620.1| - 4.1e-15 54.7 0.6 4.1e-15 54.7 0.4 2.4 2 0 0 2 2 2 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer4_21 PF14697.1 gi|284167342|ref|YP_003405620.1| - 1.9e-09 37.2 8.6 1.9e-09 37.2 5.9 2.5 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|284167342|ref|YP_003405620.1| - 2.3e-09 36.6 10.7 4.2e-06 26.3 1.7 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|284167342|ref|YP_003405620.1| - 3e-09 36.5 22.3 2.8e-07 30.2 8.9 3.6 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|284167342|ref|YP_003405620.1| - 5.7e-09 36.2 9.5 5.7e-09 36.2 6.6 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|284167342|ref|YP_003405620.1| - 6e-08 32.6 18.6 1.8e-07 31.0 6.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|284167342|ref|YP_003405620.1| - 1.2e-07 31.0 13.4 3.1e-05 23.3 1.2 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|284167342|ref|YP_003405620.1| - 3.6e-07 29.7 25.5 0.00017 21.3 1.7 4.2 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|284167342|ref|YP_003405620.1| - 7.3e-06 26.1 13.3 7.3e-06 26.1 9.2 3.0 1 1 2 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|284167342|ref|YP_003405620.1| - 2.8e-05 24.7 10.7 0.0011 19.7 0.2 3.4 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|284167342|ref|YP_003405620.1| - 6.1e-05 23.5 15.2 0.0076 16.7 1.9 3.5 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|284167342|ref|YP_003405620.1| - 0.0024 18.2 2.9 0.0024 18.2 2.0 3.1 2 1 1 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|284167342|ref|YP_003405620.1| - 0.0096 16.2 20.6 0.16 12.3 9.2 3.2 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|284167342|ref|YP_003405620.1| - 0.056 13.7 1.5 0.056 13.7 1.0 4.0 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|284167342|ref|YP_003405620.1| - 0.16 12.4 19.2 0.22 11.9 2.4 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|284167342|ref|YP_003405620.1| - 4.5 8.0 35.7 0.088 13.4 4.9 4.1 4 0 0 4 4 4 0 4Fe-4S binding domain Complex1_51K PF01512.12 gi|284167343|ref|YP_003405621.1| - 2.1e-11 43.7 0.0 3.4e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.4 gi|284167343|ref|YP_003405621.1| - 4.4e-11 41.7 0.1 1e-10 40.5 0.1 1.6 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Muted PF14942.1 gi|284167344|ref|YP_003405622.1| - 0.015 15.1 0.0 0.016 15.0 0.0 1.0 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein GFO_IDH_MocA PF01408.17 gi|284167346|ref|YP_003405624.1| - 4.3e-32 111.1 0.7 2.2e-30 105.6 0.2 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|284167346|ref|YP_003405624.1| - 3e-10 39.8 0.0 5.3e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.12 gi|284167346|ref|YP_003405624.1| - 0.00016 21.9 1.9 0.00023 21.5 0.1 2.2 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|284167346|ref|YP_003405624.1| - 0.0003 20.6 0.3 0.00084 19.2 0.1 1.9 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_3 PF03447.11 gi|284167346|ref|YP_003405624.1| - 0.0072 16.7 0.4 0.015 15.6 0.3 1.6 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain IlvN PF07991.7 gi|284167346|ref|YP_003405624.1| - 0.011 15.1 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.14 gi|284167346|ref|YP_003405624.1| - 0.013 14.6 0.1 0.025 13.7 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|284167346|ref|YP_003405624.1| - 0.04 12.8 0.1 0.058 12.3 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase CoA_binding PF02629.14 gi|284167346|ref|YP_003405624.1| - 0.1 13.1 0.4 0.29 11.6 0.1 1.8 2 0 0 2 2 2 0 CoA binding domain AAA_23 PF13476.1 gi|284167347|ref|YP_003405625.1| - 1.2e-07 32.2 61.1 0.13 12.5 29.4 4.5 1 1 1 2 2 2 1 AAA domain AAA_13 PF13166.1 gi|284167347|ref|YP_003405625.1| - 2.1e-07 29.8 46.8 1.7e-06 26.8 10.2 2.5 2 1 0 2 2 2 2 AAA domain FliJ PF02050.11 gi|284167347|ref|YP_003405625.1| - 3e-05 24.0 45.1 0.0073 16.3 2.2 4.9 2 2 2 4 4 4 2 Flagellar FliJ protein Seryl_tRNA_N PF02403.17 gi|284167347|ref|YP_003405625.1| - 4.5e-05 23.4 63.7 0.017 15.1 5.9 6.0 2 2 3 5 5 5 2 Seryl-tRNA synthetase N-terminal domain Phage_GP20 PF06810.6 gi|284167347|ref|YP_003405625.1| - 8.7e-05 22.0 53.9 0.028 13.8 6.6 5.6 2 2 4 6 6 6 2 Phage minor structural protein GP20 GAS PF13851.1 gi|284167347|ref|YP_003405625.1| - 0.00011 21.4 59.4 0.00029 20.1 11.5 4.3 2 2 2 4 4 4 3 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.4 gi|284167347|ref|YP_003405625.1| - 0.00073 19.4 30.7 0.00073 19.4 21.3 5.9 2 2 3 5 5 5 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fib_alpha PF08702.5 gi|284167347|ref|YP_003405625.1| - 0.0027 17.8 40.8 0.42 10.7 3.6 4.4 2 2 2 4 4 4 3 Fibrinogen alpha/beta chain family Reo_sigmaC PF04582.7 gi|284167347|ref|YP_003405625.1| - 0.0033 16.6 17.9 0.42 9.7 3.4 3.9 2 2 0 2 2 2 2 Reovirus sigma C capsid protein IncA PF04156.9 gi|284167347|ref|YP_003405625.1| - 0.03 13.9 94.1 22 4.5 30.4 5.0 2 2 1 3 3 3 0 IncA protein Spc7 PF08317.6 gi|284167347|ref|YP_003405625.1| - 0.033 12.8 67.7 0.6 8.7 19.5 5.4 3 2 1 4 4 4 0 Spc7 kinetochore protein MscS_porin PF12795.2 gi|284167347|ref|YP_003405625.1| - 0.035 13.4 64.7 0.032 13.5 10.7 4.0 2 2 3 5 5 5 0 Mechanosensitive ion channel porin domain DUF3584 PF12128.3 gi|284167347|ref|YP_003405625.1| - 0.037 11.3 66.8 0.019 12.3 18.8 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) IFT57 PF10498.4 gi|284167347|ref|YP_003405625.1| - 0.087 11.5 52.3 0.069 11.8 13.6 3.2 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 APG6 PF04111.7 gi|284167347|ref|YP_003405625.1| - 0.089 11.8 72.7 0.063 12.3 16.3 4.3 2 2 2 4 4 4 0 Autophagy protein Apg6 DUF1664 PF07889.7 gi|284167347|ref|YP_003405625.1| - 0.12 12.1 44.7 0.019 14.7 4.1 6.3 2 2 5 7 7 7 0 Protein of unknown function (DUF1664) TBPIP PF07106.8 gi|284167347|ref|YP_003405625.1| - 0.15 11.5 61.1 1.1 8.7 7.3 5.5 2 2 3 5 5 5 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Atg14 PF10186.4 gi|284167347|ref|YP_003405625.1| - 0.17 10.7 59.7 0.11 11.3 9.2 4.5 1 1 2 4 4 4 0 UV radiation resistance protein and autophagy-related subunit 14 Mnd1 PF03962.10 gi|284167347|ref|YP_003405625.1| - 0.26 10.9 63.3 0.021 14.4 10.2 5.4 2 2 3 5 5 5 0 Mnd1 family AAA_27 PF13514.1 gi|284167347|ref|YP_003405625.1| - 0.31 8.6 63.6 0.0064 14.2 17.5 2.6 2 1 0 2 2 2 0 AAA domain FliD_N PF02465.13 gi|284167347|ref|YP_003405625.1| - 0.44 10.9 15.4 7.2 7.0 0.0 6.0 2 2 1 4 4 4 0 Flagellar hook-associated protein 2 N-terminus DUF4201 PF13870.1 gi|284167347|ref|YP_003405625.1| - 0.51 9.7 53.1 1.3 8.4 11.5 4.7 3 1 1 4 4 4 0 Domain of unknown function (DUF4201) WEMBL PF05701.6 gi|284167347|ref|YP_003405625.1| - 0.61 8.4 61.4 0.4 9.0 18.5 3.1 2 1 0 2 2 2 0 Weak chloroplast movement under blue light KxDL PF10241.4 gi|284167347|ref|YP_003405625.1| - 1 9.2 15.9 0.14 12.0 1.5 3.9 4 2 0 4 4 3 0 Uncharacterized conserved protein DUF4407 PF14362.1 gi|284167347|ref|YP_003405625.1| - 1.1 8.0 46.1 2.7 6.8 10.9 3.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) DUF4140 PF13600.1 gi|284167347|ref|YP_003405625.1| - 1.4 9.4 69.1 0.59 10.6 4.5 8.6 2 2 5 7 7 7 0 N-terminal domain of unknown function (DUF4140) NPV_P10 PF05531.7 gi|284167347|ref|YP_003405625.1| - 1.5 9.0 34.7 2.5 8.4 0.3 6.7 2 2 3 5 5 5 0 Nucleopolyhedrovirus P10 protein DivIC PF04977.10 gi|284167347|ref|YP_003405625.1| - 1.9 8.0 75.7 0.072 12.5 1.7 9.5 2 2 7 9 9 9 0 Septum formation initiator LPP PF04728.8 gi|284167347|ref|YP_003405625.1| - 2 8.3 8.8 21 5.0 0.1 4.3 5 0 0 5 5 4 0 Lipoprotein leucine-zipper COG2 PF06148.6 gi|284167347|ref|YP_003405625.1| - 2.8 7.8 43.2 1.6 8.6 0.8 7.0 2 2 5 7 7 7 0 COG (conserved oligomeric Golgi) complex component, COG2 FlxA PF14282.1 gi|284167347|ref|YP_003405625.1| - 3.2 7.7 45.9 0.95 9.4 4.7 5.1 2 2 4 6 6 5 0 FlxA-like protein Endotoxin_N PF03945.9 gi|284167347|ref|YP_003405625.1| - 5.2 6.3 10.3 0.42 9.9 0.1 3.1 3 0 0 3 3 3 0 delta endotoxin, N-terminal domain DUF489 PF04356.7 gi|284167347|ref|YP_003405625.1| - 6.9 6.2 7.1 2.3 7.7 0.3 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF489) BLOC1_2 PF10046.4 gi|284167347|ref|YP_003405625.1| - 7 6.8 48.1 4.9 7.3 3.0 6.3 2 2 4 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Filament PF00038.16 gi|284167347|ref|YP_003405625.1| - 9.5 5.5 71.2 1.7 8.0 8.4 3.7 2 2 1 3 3 3 0 Intermediate filament protein bZIP_1 PF00170.16 gi|284167347|ref|YP_003405625.1| - 9.6 6.2 54.3 0.22 11.5 2.3 8.8 7 3 2 9 9 8 0 bZIP transcription factor adh_short PF00106.20 gi|284167348|ref|YP_003405626.1| - 6.8e-42 143.2 4.4 6.8e-42 143.2 3.1 1.5 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167348|ref|YP_003405626.1| - 7.1e-26 91.4 0.1 8.8e-26 91.1 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167348|ref|YP_003405626.1| - 2.4e-21 76.2 1.6 3.8e-21 75.5 1.1 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167348|ref|YP_003405626.1| - 0.0085 15.5 0.4 0.017 14.5 0.2 1.7 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167348|ref|YP_003405626.1| - 0.27 11.2 3.4 0.74 9.7 2.4 1.8 1 1 0 1 1 1 0 NADH(P)-binding ketoacyl-synt PF00109.21 gi|284167349|ref|YP_003405627.1| - 0.0065 15.9 0.0 0.0066 15.9 0.0 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ADH_zinc_N PF00107.21 gi|284167351|ref|YP_003405629.1| - 3.6e-23 81.5 2.7 4.2e-23 81.3 0.8 1.9 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|284167351|ref|YP_003405629.1| - 2.9e-16 60.5 1.2 4.2e-16 59.9 0.1 1.8 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.7 gi|284167351|ref|YP_003405629.1| - 5.8e-12 45.3 0.0 4.7e-10 39.1 0.0 2.4 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain DUF3184 PF11380.3 gi|284167351|ref|YP_003405629.1| - 0.0051 14.8 0.0 0.0069 14.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3184) adh_short PF00106.20 gi|284167351|ref|YP_003405629.1| - 0.01 15.7 3.2 0.02 14.8 2.2 1.5 1 0 0 1 1 1 0 short chain dehydrogenase AlaDh_PNT_C PF01262.16 gi|284167351|ref|YP_003405629.1| - 0.021 14.4 0.5 0.056 13.0 0.4 1.7 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.13 gi|284167351|ref|YP_003405629.1| - 0.052 13.5 0.4 0.25 11.3 0.1 2.1 2 1 0 2 2 2 0 TrkA-N domain Ribonuc_red_sm PF00268.16 gi|284167352|ref|YP_003405630.1| - 9.6e-09 34.6 0.0 1.4e-07 30.7 0.0 2.0 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain AurF PF11583.3 gi|284167352|ref|YP_003405630.1| - 0.00069 18.6 0.1 0.071 12.0 0.0 2.6 2 0 0 2 2 2 2 P-aminobenzoate N-oxygenase AurF Plant_all_beta PF10532.4 gi|284167353|ref|YP_003405631.1| - 0.018 15.1 0.9 0.047 13.7 0.6 1.7 1 1 1 2 2 2 0 Plant specific N-all beta domain PP-binding PF00550.20 gi|284167354|ref|YP_003405632.1| - 3.4e-11 43.2 1.0 4e-11 43.0 0.7 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site Ribosomal_L50 PF10501.4 gi|284167354|ref|YP_003405632.1| - 0.0074 16.2 0.0 0.0075 16.2 0.0 1.2 1 1 0 1 1 1 1 Ribosomal subunit 39S ketoacyl-synt PF00109.21 gi|284167355|ref|YP_003405633.1| - 9.5e-55 185.8 5.8 9.5e-55 185.8 4.0 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 gi|284167355|ref|YP_003405633.1| - 2.5e-31 107.9 0.5 2.5e-31 107.9 0.3 2.2 3 0 0 3 3 3 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.18 gi|284167355|ref|YP_003405633.1| - 9.1e-05 21.5 0.0 0.00044 19.3 0.0 2.1 2 0 0 2 2 2 1 Thiolase, N-terminal domain ClpB_D2-small PF10431.4 gi|284167355|ref|YP_003405633.1| - 0.18 11.7 0.3 5.5 6.9 0.0 2.8 2 1 1 3 3 3 0 C-terminal, D2-small domain, of ClpB protein ACPS PF01648.15 gi|284167356|ref|YP_003405634.1| - 4e-13 49.1 0.0 5.9e-13 48.6 0.0 1.3 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily GSK-3_bind PF05350.7 gi|284167356|ref|YP_003405634.1| - 0.072 12.5 0.0 0.092 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Acyl_transf_1 PF00698.16 gi|284167357|ref|YP_003405635.1| - 1.4e-41 142.8 0.1 1.7e-41 142.6 0.1 1.0 1 0 0 1 1 1 1 Acyl transferase domain Abhydrolase_5 PF12695.2 gi|284167357|ref|YP_003405635.1| - 0.035 13.8 0.2 0.059 13.1 0.1 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family IclR PF01614.13 gi|284167358|ref|YP_003405636.1| - 3.8e-27 94.5 0.0 9.7e-27 93.2 0.0 1.6 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167358|ref|YP_003405636.1| - 5.3e-10 38.7 0.5 1.2e-09 37.5 0.3 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|284167358|ref|YP_003405636.1| - 1.5e-07 30.7 0.0 2.5e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|284167358|ref|YP_003405636.1| - 9.5e-07 28.5 0.1 1.8e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|284167358|ref|YP_003405636.1| - 1.1e-06 28.2 0.0 2e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|284167358|ref|YP_003405636.1| - 2.3e-06 27.2 0.1 4e-06 26.4 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|284167358|ref|YP_003405636.1| - 1.5e-05 24.8 0.1 3e-05 23.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|284167358|ref|YP_003405636.1| - 1.9e-05 24.1 0.0 5.9e-05 22.6 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|284167358|ref|YP_003405636.1| - 0.0072 15.9 0.1 0.016 14.8 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.1 gi|284167358|ref|YP_003405636.1| - 0.0075 16.5 0.1 0.019 15.2 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_10 PF04967.7 gi|284167358|ref|YP_003405636.1| - 0.0083 15.6 0.1 0.017 14.6 0.1 1.5 1 0 0 1 1 1 1 HTH DNA binding domain B-block_TFIIIC PF04182.7 gi|284167358|ref|YP_003405636.1| - 0.021 14.6 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_45 PF14947.1 gi|284167358|ref|YP_003405636.1| - 0.022 14.5 0.1 0.038 13.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix RepL PF05732.6 gi|284167358|ref|YP_003405636.1| - 0.029 13.5 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) TrmB PF01978.14 gi|284167358|ref|YP_003405636.1| - 0.075 12.7 0.0 0.35 10.6 0.0 2.0 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB PALP PF00291.20 gi|284167359|ref|YP_003405637.1| - 3.8e-80 269.3 7.1 4.9e-80 269.0 4.9 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.1 gi|284167359|ref|YP_003405637.1| - 3.2e-06 27.3 0.1 1.2e-05 25.5 0.1 2.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|284167359|ref|YP_003405637.1| - 2.3e-05 23.7 0.2 7e-05 22.2 0.1 1.8 1 0 0 1 1 1 1 ACT domain GCV_T PF01571.16 gi|284167360|ref|YP_003405638.1| - 4.2e-65 219.0 0.0 5.7e-65 218.6 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.6 gi|284167360|ref|YP_003405638.1| - 1.6e-26 92.1 0.2 2.9e-26 91.3 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.7 gi|284167360|ref|YP_003405638.1| - 0.0013 18.5 0.1 0.26 11.1 0.0 2.3 2 0 0 2 2 2 2 Sarcosine oxidase, gamma subunit family TrmE_N PF10396.4 gi|284167360|ref|YP_003405638.1| - 0.0044 16.9 0.0 0.19 11.7 0.0 2.5 2 1 0 2 2 2 1 GTP-binding protein TrmE N-terminus GCV_H PF01597.14 gi|284167361|ref|YP_003405639.1| - 5e-41 139.1 0.0 5.5e-41 139.0 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.17 gi|284167361|ref|YP_003405639.1| - 4.2e-05 23.0 0.2 7.1e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 Biotin-requiring enzyme RnfC_N PF13375.1 gi|284167361|ref|YP_003405639.1| - 0.015 15.0 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain GDC-P PF02347.11 gi|284167362|ref|YP_003405640.1| - 6.4e-112 374.3 0.0 7.2e-112 374.2 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_5 PF00266.14 gi|284167362|ref|YP_003405640.1| - 0.0007 18.4 0.0 0.0014 17.4 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|284167362|ref|YP_003405640.1| - 0.017 13.4 0.0 0.026 12.8 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|284167363|ref|YP_003405641.1| - 9e-11 41.1 0.2 6.2e-10 38.3 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class-V GDC-P PF02347.11 gi|284167363|ref|YP_003405641.1| - 1.2e-09 37.4 0.0 2e-07 30.0 0.0 2.2 2 0 0 2 2 2 2 Glycine cleavage system P-protein Beta_elim_lyase PF01212.16 gi|284167363|ref|YP_003405641.1| - 0.0015 17.7 0.0 0.0026 16.9 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|284167363|ref|YP_003405641.1| - 0.0085 15.1 0.1 0.014 14.4 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SHMT PF00464.14 gi|284167364|ref|YP_003405642.1| - 1.3e-159 530.8 0.2 1.6e-159 530.5 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.16 gi|284167364|ref|YP_003405642.1| - 4.6e-08 32.4 0.0 8.7e-08 31.5 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|284167364|ref|YP_003405642.1| - 0.0003 20.0 0.1 0.023 13.8 0.0 2.1 2 0 0 2 2 2 2 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|284167364|ref|YP_003405642.1| - 0.012 14.6 0.4 0.022 13.8 0.3 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family B12-binding PF02310.14 gi|284167364|ref|YP_003405642.1| - 0.013 15.3 0.1 5.5 6.8 0.0 2.8 2 0 0 2 2 2 0 B12 binding domain Ribonuc_L-PSP PF01042.16 gi|284167365|ref|YP_003405643.1| - 3.2e-40 136.6 0.0 3.5e-40 136.5 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Pyr_redox_2 PF07992.9 gi|284167366|ref|YP_003405644.1| - 1.7e-42 145.6 0.0 3.2e-42 144.7 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|284167366|ref|YP_003405644.1| - 2.9e-30 104.5 0.3 2.9e-30 104.5 0.2 1.8 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|284167366|ref|YP_003405644.1| - 2.1e-18 66.4 4.9 4.5e-15 55.8 0.0 3.6 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|284167366|ref|YP_003405644.1| - 2.2e-12 46.5 0.3 1.2e-08 34.2 0.0 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|284167366|ref|YP_003405644.1| - 8.3e-10 38.2 3.1 4.5e-06 25.9 0.3 2.4 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_3 PF13738.1 gi|284167366|ref|YP_003405644.1| - 1.9e-09 37.8 0.0 4.7e-09 36.6 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.9 gi|284167366|ref|YP_003405644.1| - 5.4e-08 32.4 0.2 0.00036 19.9 0.0 2.5 2 0 0 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_2 PF00890.19 gi|284167366|ref|YP_003405644.1| - 1.2e-06 27.7 9.8 0.0012 17.8 0.8 3.8 4 0 0 4 4 4 2 FAD binding domain Thi4 PF01946.12 gi|284167366|ref|YP_003405644.1| - 2.5e-06 26.7 2.6 0.00027 20.1 0.1 2.8 3 0 0 3 3 3 1 Thi4 family DAO PF01266.19 gi|284167366|ref|YP_003405644.1| - 3e-06 26.3 13.8 0.00057 18.8 1.1 3.6 3 1 0 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167366|ref|YP_003405644.1| - 3.8e-06 26.8 3.3 0.0029 17.6 0.2 2.9 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|284167366|ref|YP_003405644.1| - 2e-05 23.2 2.3 0.0063 15.0 0.2 3.1 3 0 0 3 3 3 2 HI0933-like protein Lycopene_cycl PF05834.7 gi|284167366|ref|YP_003405644.1| - 9.2e-05 21.5 2.6 0.046 12.6 0.4 2.4 2 0 0 2 2 2 2 Lycopene cyclase protein Trp_halogenase PF04820.9 gi|284167366|ref|YP_003405644.1| - 0.00011 20.9 0.4 0.0011 17.7 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase 3HCDH_N PF02737.13 gi|284167366|ref|YP_003405644.1| - 0.00022 20.9 1.9 0.0099 15.5 0.0 2.7 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_oxidored PF12831.2 gi|284167366|ref|YP_003405644.1| - 0.00041 19.5 0.4 0.00041 19.5 0.3 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase XdhC_C PF13478.1 gi|284167366|ref|YP_003405644.1| - 0.00065 20.0 0.1 0.041 14.1 0.0 2.5 2 0 0 2 2 2 1 XdhC Rossmann domain NAD_binding_7 PF13241.1 gi|284167366|ref|YP_003405644.1| - 0.0032 17.6 0.2 3.9 7.7 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding TrkA_N PF02254.13 gi|284167366|ref|YP_003405644.1| - 0.026 14.5 0.5 3.7 7.5 0.0 2.9 2 0 0 2 2 2 0 TrkA-N domain CPSase_L_chain PF00289.17 gi|284167366|ref|YP_003405644.1| - 0.036 14.1 0.2 8.8 6.4 0.0 3.0 2 1 1 3 3 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain ThiF PF00899.16 gi|284167366|ref|YP_003405644.1| - 0.042 13.6 5.7 1.5 8.6 0.2 2.9 3 1 0 3 3 3 0 ThiF family HSA PF07529.8 gi|284167366|ref|YP_003405644.1| - 0.062 13.0 0.1 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 HSA AlaDh_PNT_C PF01262.16 gi|284167366|ref|YP_003405644.1| - 0.086 12.3 0.4 0.88 9.1 0.0 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain ApbA PF02558.11 gi|284167366|ref|YP_003405644.1| - 0.29 10.5 2.4 11 5.4 0.1 2.5 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.1 gi|284167366|ref|YP_003405644.1| - 0.34 10.6 8.1 3.5 7.3 0.1 4.0 2 2 2 4 4 4 0 FAD-NAD(P)-binding Radical_SAM PF04055.16 gi|284167367|ref|YP_003405645.1| - 1.2e-11 45.0 0.0 3.1e-11 43.7 0.0 1.7 1 1 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 gi|284167367|ref|YP_003405645.1| - 0.093 12.6 0.1 14 5.5 0.0 2.9 1 1 2 3 3 3 0 B12 binding domain UPF0126 PF03458.8 gi|284167368|ref|YP_003405646.1| - 2.1e-35 120.1 26.9 1.4e-18 66.2 8.0 2.4 2 1 0 2 2 2 2 UPF0126 domain FMN_dh PF01070.13 gi|284167369|ref|YP_003405647.1| - 1.4e-34 119.5 0.1 1.3e-22 80.2 0.0 2.1 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|284167369|ref|YP_003405647.1| - 5.2e-05 22.3 5.1 0.0086 15.0 0.3 3.4 4 0 0 4 4 4 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.12 gi|284167369|ref|YP_003405647.1| - 0.011 14.6 6.0 0.035 13.0 4.2 1.8 1 1 0 1 1 1 0 Conserved region in glutamate synthase FhuF PF06276.7 gi|284167369|ref|YP_003405647.1| - 0.052 13.5 0.0 0.089 12.7 0.0 1.3 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter YuzL PF14115.1 gi|284167369|ref|YP_003405647.1| - 0.073 13.3 0.2 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 YuzL-like protein Trep_Strep PF09605.5 gi|284167370|ref|YP_003405648.1| - 9.9 5.7 10.7 0.76 9.4 1.0 2.6 2 1 0 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) DUF2955 PF11168.3 gi|284167371|ref|YP_003405649.1| - 0.038 13.6 16.7 0.062 12.9 3.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF2955) DUF624 PF04854.9 gi|284167371|ref|YP_003405649.1| - 0.28 11.0 10.1 0.8 9.6 0.7 2.7 2 1 0 2 2 2 0 Protein of unknown function, DUF624 Peptidase_M20 PF01546.23 gi|284167372|ref|YP_003405650.1| - 2.2e-22 79.5 4.4 5.7e-22 78.1 3.1 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|284167372|ref|YP_003405650.1| - 2.5e-15 56.1 1.6 6.2e-15 54.9 1.1 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Glycos_transf_3 PF00591.16 gi|284167373|ref|YP_003405651.1| - 1.4e-92 309.6 4.5 1.9e-92 309.2 3.2 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|284167373|ref|YP_003405651.1| - 1.4e-15 56.5 1.5 6.6e-15 54.4 0.3 2.4 2 1 0 2 2 2 1 Glycosyl transferase family, helical bundle domain DUF2717 PF10911.3 gi|284167373|ref|YP_003405651.1| - 0.023 14.2 0.0 0.067 12.7 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) MaoC_dehydrat_N PF13452.1 gi|284167375|ref|YP_003405653.1| - 0.017 14.9 0.2 0.044 13.5 0.0 1.8 2 1 0 2 2 2 0 N-terminal half of MaoC dehydratase 4HBT_2 PF13279.1 gi|284167376|ref|YP_003405654.1| - 6.4e-32 110.5 0.0 7.4e-25 87.7 0.0 2.1 2 0 0 2 2 2 2 Thioesterase-like superfamily 4HBT PF03061.17 gi|284167376|ref|YP_003405654.1| - 8.8e-08 32.1 0.0 0.0013 18.8 0.0 2.5 2 0 0 2 2 2 2 Thioesterase superfamily Acyl-ACP_TE PF01643.12 gi|284167376|ref|YP_003405654.1| - 6.6e-06 25.2 0.0 0.00013 20.9 0.0 2.0 2 0 0 2 2 2 1 Acyl-ACP thioesterase 4HBT_3 PF13622.1 gi|284167376|ref|YP_003405654.1| - 0.005 16.6 0.0 0.089 12.5 0.0 2.1 2 0 0 2 2 2 1 Thioesterase-like superfamily 4HBT PF03061.17 gi|284167377|ref|YP_003405655.1| - 2.7e-14 53.0 1.0 4.5e-14 52.3 0.7 1.4 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.1 gi|284167377|ref|YP_003405655.1| - 9e-10 38.6 0.1 1.2e-09 38.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) MaoC_dehydratas PF01575.14 gi|284167377|ref|YP_003405655.1| - 0.026 13.9 0.2 0.034 13.5 0.1 1.2 1 0 0 1 1 1 0 MaoC like domain Molybdopterin PF00384.17 gi|284167378|ref|YP_003405656.1| - 1.1e-85 287.9 0.0 1.4e-85 287.6 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|284167378|ref|YP_003405656.1| - 1.6e-32 111.6 0.0 3.2e-32 110.5 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Fer2_4 PF13510.1 gi|284167378|ref|YP_003405656.1| - 5.2e-28 96.6 0.2 1.4e-27 95.3 0.1 1.8 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NADH-G_4Fe-4S_3 PF10588.4 gi|284167378|ref|YP_003405656.1| - 4.7e-15 54.5 0.6 1.5e-14 52.9 0.4 2.0 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Molybdop_Fe4S4 PF04879.11 gi|284167378|ref|YP_003405656.1| - 4.3e-10 39.2 0.1 1.6e-09 37.4 0.0 2.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4_7 PF12838.2 gi|284167378|ref|YP_003405656.1| - 1.3e-08 35.1 11.7 4.6e-07 30.1 6.0 3.7 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|284167378|ref|YP_003405656.1| - 5.3e-08 32.6 8.4 5.3e-08 32.6 5.8 2.9 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|284167378|ref|YP_003405656.1| - 1.7e-06 27.3 22.2 4e-05 23.0 1.8 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|284167378|ref|YP_003405656.1| - 5e-06 26.1 12.7 9.2e-05 22.1 1.4 4.1 5 0 0 5 5 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|284167378|ref|YP_003405656.1| - 5.4e-06 26.1 10.5 5.4e-06 26.1 7.2 3.4 4 1 1 5 5 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|284167378|ref|YP_003405656.1| - 6.9e-06 26.0 7.9 6.9e-06 26.0 5.5 3.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|284167378|ref|YP_003405656.1| - 0.00013 22.1 12.8 0.00013 22.1 8.9 3.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|284167378|ref|YP_003405656.1| - 0.0025 18.4 1.1 0.0025 18.4 0.7 4.3 5 0 0 5 5 3 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|284167378|ref|YP_003405656.1| - 0.0075 16.1 2.7 0.0075 16.1 1.8 4.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|284167378|ref|YP_003405656.1| - 0.17 12.4 16.6 0.087 13.3 0.5 4.2 5 0 0 5 5 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|284167378|ref|YP_003405656.1| - 4.9 7.6 15.0 6.6 7.2 1.9 3.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|284167378|ref|YP_003405656.1| - 7.3 7.0 24.0 0.073 13.5 2.3 3.2 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|284167378|ref|YP_003405656.1| - 7.9 6.9 22.8 0.072 13.4 0.3 4.2 3 1 0 3 3 3 0 4Fe-4S dicluster domain Complex1_51K PF01512.12 gi|284167379|ref|YP_003405657.1| - 1.4e-15 57.2 0.0 2.2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.4 gi|284167379|ref|YP_003405657.1| - 3e-07 29.4 0.0 7.9e-07 28.1 0.0 1.7 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.4 gi|284167379|ref|YP_003405657.1| - 0.074 12.9 0.1 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 SLBB domain ECH PF00378.15 gi|284167381|ref|YP_003405659.1| - 8.3e-52 175.7 0.0 9.1e-52 175.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|284167381|ref|YP_003405659.1| - 0.055 13.6 0.2 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 2-enoyl-CoA Hydratase C-terminal region MaoC_dehydratas PF01575.14 gi|284167382|ref|YP_003405660.1| - 1e-19 70.1 0.0 1.3e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.1 gi|284167382|ref|YP_003405660.1| - 3.5e-10 39.7 0.1 6.8e-10 38.8 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase FabA PF07977.8 gi|284167382|ref|YP_003405660.1| - 0.011 15.2 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 0 FabA-like domain CRISPR_Cse2 PF09485.5 gi|284167382|ref|YP_003405660.1| - 0.012 15.6 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) 4HBT PF03061.17 gi|284167382|ref|YP_003405660.1| - 0.071 13.2 0.0 0.41 10.7 0.0 2.1 2 0 0 2 2 2 0 Thioesterase superfamily NAD_binding_9 PF13454.1 gi|284167383|ref|YP_003405661.1| - 0.1 12.3 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 FAD-NAD(P)-binding UbiD PF01977.11 gi|284167384|ref|YP_003405662.1| - 4.4e-106 354.7 0.0 5.2e-106 354.5 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD PF01977.11 gi|284167385|ref|YP_003405663.1| - 1.1e-18 66.9 0.0 2.8e-18 65.5 0.0 1.6 1 1 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Lactamase_B PF00753.22 gi|284167386|ref|YP_003405664.1| - 1.8e-19 70.1 5.6 2.9e-19 69.4 3.9 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|284167386|ref|YP_003405664.1| - 1.6e-06 27.8 0.4 2.2e-06 27.3 0.3 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain TrmB PF01978.14 gi|284167386|ref|YP_003405664.1| - 0.17 11.6 0.0 0.32 10.7 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB ECH PF00378.15 gi|284167387|ref|YP_003405665.1| - 1.7e-56 191.1 0.0 1.9e-56 190.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family PaaA_PaaC PF05138.7 gi|284167388|ref|YP_003405666.1| - 9.1e-22 77.2 0.6 1.1e-21 77.0 0.4 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein MiaE_2 PF13794.1 gi|284167388|ref|YP_003405666.1| - 0.056 12.9 0.0 0.22 11.0 0.0 1.8 2 0 0 2 2 2 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like PaaB PF06243.6 gi|284167389|ref|YP_003405667.1| - 1.2e-06 28.5 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Phenylacetic acid degradation B DUF59 PF01883.14 gi|284167390|ref|YP_003405668.1| - 7.1e-13 48.3 0.0 1.2e-12 47.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF59 PaaA_PaaC PF05138.7 gi|284167391|ref|YP_003405669.1| - 1.2e-62 211.2 0.6 1.6e-62 210.8 0.4 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein VWA_CoxE PF05762.9 gi|284167391|ref|YP_003405669.1| - 0.064 12.3 0.0 1.4 8.0 0.0 2.1 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein Acetyltransf_1 PF00583.19 gi|284167392|ref|YP_003405670.1| - 2.4e-12 46.7 0.1 3.3e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|284167392|ref|YP_003405670.1| - 3.4e-09 36.7 0.0 5e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|284167392|ref|YP_003405670.1| - 7.5e-07 29.2 0.1 9.2e-07 28.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|284167392|ref|YP_003405670.1| - 7.1e-06 26.1 0.0 8.3e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|284167392|ref|YP_003405670.1| - 0.0026 17.6 0.1 0.0057 16.5 0.1 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|284167392|ref|YP_003405670.1| - 0.024 14.3 0.0 0.036 13.7 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein DUF3749 PF12568.3 gi|284167392|ref|YP_003405670.1| - 0.049 13.2 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PriCT_2 PF08707.6 gi|284167392|ref|YP_003405670.1| - 0.11 12.3 0.4 0.36 10.7 0.1 1.9 2 0 0 2 2 2 0 Primase C terminal 2 (PriCT-2) Fer2 PF00111.22 gi|284167393|ref|YP_003405671.1| - 1.2e-13 50.6 1.1 1.4e-13 50.3 0.8 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.1 gi|284167393|ref|YP_003405671.1| - 0.035 13.9 0.1 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.1 gi|284167393|ref|YP_003405671.1| - 0.081 12.7 0.8 0.27 11.0 0.5 2.0 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain TF_Zn_Ribbon PF08271.7 gi|284167393|ref|YP_003405671.1| - 0.4 10.0 3.7 0.8 9.0 2.5 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding AMP-binding PF00501.23 gi|284167394|ref|YP_003405672.1| - 1.7e-85 286.9 0.0 2.1e-85 286.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167394|ref|YP_003405672.1| - 7e-19 68.5 0.6 7e-19 68.5 0.4 2.8 3 1 0 3 3 3 1 AMP-binding enzyme C-terminal domain DUF211 PF02680.9 gi|284167394|ref|YP_003405672.1| - 0.0047 16.6 0.3 0.016 15.0 0.0 2.0 3 0 0 3 3 3 1 Uncharacterized ArCR, COG1888 MarR_2 PF12802.2 gi|284167395|ref|YP_003405673.1| - 0.00022 20.7 0.0 0.00033 20.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_40 PF14493.1 gi|284167395|ref|YP_003405673.1| - 0.0017 18.5 0.1 0.0021 18.2 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|284167395|ref|YP_003405673.1| - 0.0022 17.3 0.0 0.0038 16.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|284167395|ref|YP_003405673.1| - 0.0042 16.6 0.3 0.0077 15.8 0.2 1.6 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|284167395|ref|YP_003405673.1| - 0.005 16.6 0.3 0.008 15.9 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|284167395|ref|YP_003405673.1| - 0.011 15.3 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|284167395|ref|YP_003405673.1| - 0.018 14.7 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|284167395|ref|YP_003405673.1| - 0.018 14.7 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.1 gi|284167395|ref|YP_003405673.1| - 0.019 15.0 0.0 0.18 11.9 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|284167395|ref|YP_003405673.1| - 0.023 14.3 0.1 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 HTH domain HTH_29 PF13551.1 gi|284167395|ref|YP_003405673.1| - 0.023 14.8 0.0 0.045 13.8 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn helix HTH_Crp_2 PF13545.1 gi|284167395|ref|YP_003405673.1| - 0.029 14.1 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|284167395|ref|YP_003405673.1| - 0.042 13.3 0.0 0.078 12.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Rrf2 PF02082.15 gi|284167395|ref|YP_003405673.1| - 0.12 12.4 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator CoA_trans PF01144.18 gi|284167396|ref|YP_003405674.1| - 3.2e-17 62.4 0.0 6.6e-17 61.4 0.0 1.5 1 1 0 1 1 1 1 Coenzyme A transferase CitF PF04223.7 gi|284167396|ref|YP_003405674.1| - 0.11 11.1 0.1 0.39 9.3 0.0 1.7 1 1 1 2 2 2 0 Citrate lyase, alpha subunit (CitF) CoA_trans PF01144.18 gi|284167397|ref|YP_003405675.1| - 2.7e-25 88.8 0.1 3.4e-25 88.4 0.1 1.1 1 0 0 1 1 1 1 Coenzyme A transferase Mfp-3 PF04202.8 gi|284167397|ref|YP_003405675.1| - 0.076 13.2 1.7 0.1 12.7 0.3 1.9 2 0 0 2 2 2 0 Foot protein 3 Peripla_BP_6 PF13458.1 gi|284167398|ref|YP_003405676.1| - 6.1e-76 255.9 7.6 7.4e-76 255.7 5.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.1 gi|284167398|ref|YP_003405676.1| - 6.3e-46 156.7 1.1 7.5e-46 156.5 0.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.23 gi|284167398|ref|YP_003405676.1| - 2.6e-15 56.0 1.4 1.9e-14 53.2 1.0 1.9 1 1 0 1 1 1 1 Receptor family ligand binding region LppC PF04348.8 gi|284167398|ref|YP_003405676.1| - 0.00039 19.1 0.0 0.00048 18.8 0.0 1.1 1 0 0 1 1 1 1 LppC putative lipoprotein TAT_signal PF10518.4 gi|284167398|ref|YP_003405676.1| - 0.00079 19.2 2.1 0.00079 19.2 1.4 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_2 PF02653.11 gi|284167399|ref|YP_003405677.1| - 1.1e-42 145.9 46.2 1.4e-42 145.5 32.0 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.11 gi|284167400|ref|YP_003405678.1| - 5.3e-38 130.5 34.5 7.8e-38 129.9 23.9 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.22 gi|284167401|ref|YP_003405679.1| - 2.8e-28 98.9 0.0 4e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167401|ref|YP_003405679.1| - 5.9e-14 52.7 3.5 1.4e-11 44.9 2.4 2.1 1 1 0 1 1 1 1 AAA domain BCA_ABC_TP_C PF12399.3 gi|284167401|ref|YP_003405679.1| - 2e-09 36.9 0.0 4.5e-09 35.7 0.0 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.14 gi|284167401|ref|YP_003405679.1| - 1.9e-05 24.0 0.4 0.0002 20.6 0.3 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|284167401|ref|YP_003405679.1| - 2.4e-05 23.5 2.3 0.062 12.3 0.1 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|284167401|ref|YP_003405679.1| - 3.7e-05 24.1 2.7 5.9e-05 23.4 1.9 1.3 1 0 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|284167401|ref|YP_003405679.1| - 0.00055 19.1 0.0 0.00094 18.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|284167401|ref|YP_003405679.1| - 0.0018 17.7 0.4 0.0038 16.7 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.18 gi|284167401|ref|YP_003405679.1| - 0.011 15.6 0.2 0.027 14.3 0.1 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.1 gi|284167401|ref|YP_003405679.1| - 0.012 15.7 0.3 0.027 14.5 0.2 1.8 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.4 gi|284167401|ref|YP_003405679.1| - 0.033 12.7 0.2 0.065 11.8 0.1 1.4 1 0 0 1 1 1 0 Predicted ATPase of the ABC class SRPRB PF09439.5 gi|284167401|ref|YP_003405679.1| - 0.044 12.9 0.3 0.25 10.5 0.0 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_25 PF13481.1 gi|284167401|ref|YP_003405679.1| - 0.064 12.6 0.1 0.31 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|284167401|ref|YP_003405679.1| - 0.075 12.9 0.0 0.14 12.1 0.0 1.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.1 gi|284167401|ref|YP_003405679.1| - 0.082 12.8 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|284167401|ref|YP_003405679.1| - 0.086 12.7 0.0 0.46 10.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain FeoB_N PF02421.13 gi|284167401|ref|YP_003405679.1| - 0.091 12.0 1.3 0.1 11.8 0.1 1.6 2 0 0 2 2 2 0 Ferrous iron transport protein B cobW PF02492.14 gi|284167401|ref|YP_003405679.1| - 0.14 11.6 1.6 0.14 11.5 0.2 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF3584 PF12128.3 gi|284167401|ref|YP_003405679.1| - 0.19 9.0 0.3 0.26 8.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran PF00005.22 gi|284167402|ref|YP_003405680.1| - 1.1e-30 106.6 0.0 1.5e-30 106.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167402|ref|YP_003405680.1| - 8.1e-12 45.6 0.0 1.5e-09 38.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|284167402|ref|YP_003405680.1| - 0.00016 21.8 0.5 0.00091 19.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|284167402|ref|YP_003405680.1| - 0.00018 20.8 0.2 0.22 10.7 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|284167402|ref|YP_003405680.1| - 0.00052 20.3 0.0 0.0008 19.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|284167402|ref|YP_003405680.1| - 0.0025 17.3 0.1 0.0046 16.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.7 gi|284167402|ref|YP_003405680.1| - 0.0032 16.5 0.2 0.04 13.0 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin SbcCD_C PF13558.1 gi|284167402|ref|YP_003405680.1| - 0.01 15.7 0.4 0.095 12.6 0.3 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|284167402|ref|YP_003405680.1| - 0.015 15.1 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|284167402|ref|YP_003405680.1| - 0.02 14.5 0.1 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_16 PF13191.1 gi|284167402|ref|YP_003405680.1| - 0.025 14.5 1.2 0.4 10.6 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Miro PF08477.8 gi|284167402|ref|YP_003405680.1| - 0.027 14.9 0.0 0.082 13.4 0.0 1.8 2 0 0 2 2 1 0 Miro-like protein MobB PF03205.9 gi|284167402|ref|YP_003405680.1| - 0.033 13.9 0.2 0.15 11.7 0.0 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.1 gi|284167402|ref|YP_003405680.1| - 0.038 13.4 0.2 0.15 11.4 0.2 2.1 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|284167402|ref|YP_003405680.1| - 0.048 12.5 0.1 0.08 11.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.1 gi|284167402|ref|YP_003405680.1| - 0.053 13.1 1.2 0.13 11.7 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|284167402|ref|YP_003405680.1| - 0.068 12.6 0.3 2.4 7.5 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain AAA_19 PF13245.1 gi|284167402|ref|YP_003405680.1| - 0.08 12.6 1.5 2.5 7.8 0.2 2.5 2 0 0 2 2 2 0 Part of AAA domain NACHT PF05729.7 gi|284167402|ref|YP_003405680.1| - 0.084 12.5 0.5 0.18 11.4 0.1 1.7 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.17 gi|284167402|ref|YP_003405680.1| - 0.11 11.9 0.5 0.18 11.2 0.4 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain T2SE PF00437.15 gi|284167402|ref|YP_003405680.1| - 0.11 11.3 0.5 0.37 9.6 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein ECH PF00378.15 gi|284167403|ref|YP_003405681.1| - 2.2e-33 115.3 0.0 2.7e-33 115.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH PF00378.15 gi|284167404|ref|YP_003405682.1| - 8.7e-50 169.1 0.0 9.9e-50 168.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|284167404|ref|YP_003405682.1| - 0.092 12.8 0.0 0.24 11.5 0.0 1.6 2 0 0 2 2 2 0 2-enoyl-CoA Hydratase C-terminal region Peptidase_S49 PF01343.13 gi|284167404|ref|YP_003405682.1| - 0.096 12.4 0.0 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 Peptidase family S49 Usp PF00582.21 gi|284167405|ref|YP_003405683.1| - 3.3e-20 72.7 0.4 4.2e-20 72.3 0.3 1.1 1 0 0 1 1 1 1 Universal stress protein family HGTP_anticodon PF03129.15 gi|284167405|ref|YP_003405683.1| - 0.015 15.2 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 Anticodon binding domain Acetyltransf_1 PF00583.19 gi|284167406|ref|YP_003405684.1| - 1.4e-14 53.8 0.0 3.5e-14 52.5 0.0 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|284167406|ref|YP_003405684.1| - 2.7e-14 53.5 0.0 3.5e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|284167406|ref|YP_003405684.1| - 1.3e-07 31.7 0.0 1.7e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|284167406|ref|YP_003405684.1| - 3.3e-07 30.2 0.0 6.1e-06 26.1 0.0 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|284167406|ref|YP_003405684.1| - 4.4e-07 29.9 0.0 5.7e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|284167406|ref|YP_003405684.1| - 1.3e-06 28.4 0.0 2.3e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|284167406|ref|YP_003405684.1| - 1.5e-05 24.6 0.0 2.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|284167406|ref|YP_003405684.1| - 0.00012 22.0 0.0 0.00026 20.8 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.1 gi|284167406|ref|YP_003405684.1| - 0.041 13.1 0.0 0.056 12.7 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Acetyltransf_CG PF14542.1 gi|284167406|ref|YP_003405684.1| - 0.042 13.7 0.0 0.093 12.6 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase ECH PF00378.15 gi|284167407|ref|YP_003405685.1| - 5.9e-65 218.7 0.3 7e-65 218.5 0.2 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|284167407|ref|YP_003405685.1| - 2e-05 24.6 0.0 3.9e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 2-enoyl-CoA Hydratase C-terminal region Peptidase_S49 PF01343.13 gi|284167407|ref|YP_003405685.1| - 0.0031 17.3 0.2 1.7 8.4 0.0 2.3 2 0 0 2 2 2 2 Peptidase family S49 Atg31 PF09795.4 gi|284167407|ref|YP_003405685.1| - 0.13 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Autophagy-related protein 31 3HCDH_N PF02737.13 gi|284167408|ref|YP_003405686.1| - 1.4e-62 210.5 3.6 1.9e-62 210.1 2.5 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|284167408|ref|YP_003405686.1| - 1.4e-31 108.7 0.1 9.9e-31 106.0 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|284167408|ref|YP_003405686.1| - 9.9e-10 38.3 0.4 2.2e-09 37.2 0.3 1.6 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.9 gi|284167408|ref|YP_003405686.1| - 0.00016 21.0 0.3 0.00026 20.4 0.2 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.10 gi|284167408|ref|YP_003405686.1| - 0.00025 20.9 4.6 0.00025 20.9 3.2 2.0 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|284167408|ref|YP_003405686.1| - 0.0011 19.3 6.4 0.0063 16.9 2.6 3.0 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_3 PF03447.11 gi|284167408|ref|YP_003405686.1| - 0.04 14.3 0.1 0.074 13.4 0.1 1.6 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain ApbA PF02558.11 gi|284167408|ref|YP_003405686.1| - 0.083 12.3 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA HTH_20 PF12840.2 gi|284167409|ref|YP_003405687.1| - 0.00017 21.3 0.1 0.00071 19.3 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.14 gi|284167410|ref|YP_003405688.1| - 0.00018 21.1 0.0 0.00021 20.9 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|284167410|ref|YP_003405688.1| - 0.00035 20.2 0.0 0.00041 20.0 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|284167410|ref|YP_003405688.1| - 0.00043 19.8 0.5 0.00051 19.5 0.4 1.1 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.1 gi|284167410|ref|YP_003405688.1| - 0.0028 17.9 0.0 0.0033 17.6 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|284167410|ref|YP_003405688.1| - 0.0048 16.5 0.1 0.0061 16.2 0.1 1.1 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|284167410|ref|YP_003405688.1| - 0.0082 16.2 0.1 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulator FeoC PF09012.5 gi|284167410|ref|YP_003405688.1| - 0.019 14.6 0.0 0.023 14.3 0.0 1.1 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_36 PF13730.1 gi|284167410|ref|YP_003405688.1| - 0.049 13.7 0.0 0.09 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.2 gi|284167410|ref|YP_003405688.1| - 0.058 13.2 0.0 0.063 13.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.1 gi|284167410|ref|YP_003405688.1| - 0.12 12.4 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF35 PF01796.12 gi|284167411|ref|YP_003405689.1| - 6e-09 36.0 0.9 6e-09 36.0 0.7 2.2 2 0 0 2 2 2 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|284167411|ref|YP_003405689.1| - 1e-06 28.4 4.5 3e-06 26.9 3.1 1.7 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Thiolase_C PF02803.13 gi|284167412|ref|YP_003405690.1| - 6.7e-09 35.2 0.0 1.7e-08 33.8 0.0 1.7 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|284167412|ref|YP_003405690.1| - 2.1e-08 33.4 0.0 2.9e-07 29.7 0.0 2.0 2 0 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|284167412|ref|YP_003405690.1| - 8e-07 28.7 2.3 6.3e-06 25.8 1.0 2.2 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 gi|284167412|ref|YP_003405690.1| - 0.091 12.4 0.1 5.7 6.6 0.0 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aldedh PF00171.17 gi|284167413|ref|YP_003405691.1| - 6.6e-185 614.8 0.0 7.4e-185 614.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family YCII PF03795.9 gi|284167413|ref|YP_003405691.1| - 0.0086 16.2 0.3 0.047 13.8 0.0 2.3 2 1 0 2 2 2 1 YCII-related domain Acyl-CoA_dh_1 PF00441.19 gi|284167414|ref|YP_003405692.1| - 2.2e-44 151.1 2.5 4.6e-44 150.1 0.9 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167414|ref|YP_003405692.1| - 1.4e-32 112.5 0.4 3.1e-32 111.5 0.2 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|284167414|ref|YP_003405692.1| - 6.4e-19 68.5 0.3 6.4e-19 68.5 0.2 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167414|ref|YP_003405692.1| - 1.2e-13 50.3 0.0 2.3e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Amidohydro_2 PF04909.9 gi|284167415|ref|YP_003405693.1| - 4.2e-50 170.8 3.8 5.3e-50 170.4 2.6 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.16 gi|284167415|ref|YP_003405693.1| - 0.044 12.9 0.0 0.085 12.0 0.0 1.5 1 0 0 1 1 1 0 TatD related DNase HTH_10 PF04967.7 gi|284167416|ref|YP_003405694.1| - 1.6e-14 53.2 0.1 2.6e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.2 gi|284167416|ref|YP_003405694.1| - 0.013 15.1 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.15 gi|284167416|ref|YP_003405694.1| - 0.023 14.3 0.0 0.048 13.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family IclR PF01614.13 gi|284167417|ref|YP_003405695.1| - 1.7e-34 118.2 0.0 2.6e-34 117.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167417|ref|YP_003405695.1| - 1.5e-11 43.6 0.0 5e-11 42.0 0.0 1.9 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_5 PF01022.15 gi|284167417|ref|YP_003405695.1| - 5.2e-10 38.8 0.1 1.4e-09 37.4 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|284167417|ref|YP_003405695.1| - 2.6e-08 33.3 0.1 1.2e-07 31.2 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.1 gi|284167417|ref|YP_003405695.1| - 3.5e-08 32.6 0.2 1.2e-07 31.0 0.1 1.9 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|284167417|ref|YP_003405695.1| - 1.3e-06 28.0 0.1 1.3e-05 24.8 0.0 2.1 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.2 gi|284167417|ref|YP_003405695.1| - 2.3e-06 27.1 0.0 1e-05 25.1 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_DeoR PF08220.7 gi|284167417|ref|YP_003405695.1| - 6.2e-06 25.6 0.4 1.6e-05 24.3 0.0 1.9 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|284167417|ref|YP_003405695.1| - 1.7e-05 24.2 0.2 0.00015 21.2 0.0 2.7 4 0 0 4 4 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|284167417|ref|YP_003405695.1| - 1.8e-05 24.3 0.5 0.00011 21.7 0.0 2.4 3 0 0 3 3 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|284167417|ref|YP_003405695.1| - 2.2e-05 24.1 0.0 7.9e-05 22.3 0.0 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|284167417|ref|YP_003405695.1| - 5.1e-05 22.7 0.2 0.01 15.3 0.0 3.6 3 1 1 4 4 4 1 LexA DNA binding domain B-block_TFIIIC PF04182.7 gi|284167417|ref|YP_003405695.1| - 7.9e-05 22.4 0.0 0.00014 21.6 0.0 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC Fe_dep_repress PF01325.14 gi|284167417|ref|YP_003405695.1| - 8.5e-05 22.4 0.0 0.00031 20.6 0.0 2.0 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Mga PF08280.6 gi|284167417|ref|YP_003405695.1| - 0.00011 21.8 0.0 0.00021 20.9 0.0 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_10 PF04967.7 gi|284167417|ref|YP_003405695.1| - 0.00019 20.9 0.0 0.0006 19.3 0.0 1.8 1 0 0 1 1 1 1 HTH DNA binding domain HTH_38 PF13936.1 gi|284167417|ref|YP_003405695.1| - 0.00032 20.1 0.4 0.011 15.3 0.1 2.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_40 PF14493.1 gi|284167417|ref|YP_003405695.1| - 0.00064 19.9 0.2 0.0021 18.2 0.0 2.0 2 0 0 2 2 1 1 Helix-turn-helix domain TFIIE_alpha PF02002.12 gi|284167417|ref|YP_003405695.1| - 0.0013 18.1 0.1 0.0081 15.6 0.1 2.2 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_28 PF13518.1 gi|284167417|ref|YP_003405695.1| - 0.0017 18.3 0.0 0.0061 16.5 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|284167417|ref|YP_003405695.1| - 0.0022 17.7 0.0 0.0047 16.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.15 gi|284167417|ref|YP_003405695.1| - 0.0029 17.6 0.0 0.018 15.1 0.0 2.1 2 0 0 2 2 2 1 Transcriptional regulator FeoC PF09012.5 gi|284167417|ref|YP_003405695.1| - 0.0069 16.0 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator GntR PF00392.16 gi|284167417|ref|YP_003405695.1| - 0.012 15.0 0.9 0.04 13.3 0.0 2.3 3 0 0 3 3 1 0 Bacterial regulatory proteins, gntR family HTH_Tnp_ISL3 PF13542.1 gi|284167417|ref|YP_003405695.1| - 0.014 14.5 0.0 2.1 7.5 0.0 2.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_7 PF02796.10 gi|284167417|ref|YP_003405695.1| - 0.019 14.8 0.1 0.052 13.4 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Phage_CI_repr PF07022.8 gi|284167417|ref|YP_003405695.1| - 0.026 14.5 0.0 0.039 14.0 0.0 1.3 1 1 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_27 PF13463.1 gi|284167417|ref|YP_003405695.1| - 0.027 14.8 0.1 0.12 12.6 0.0 2.1 2 0 0 2 2 1 0 Winged helix DNA-binding domain Mga PF05043.8 gi|284167417|ref|YP_003405695.1| - 0.028 14.6 0.0 0.062 13.5 0.0 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_29 PF13551.1 gi|284167417|ref|YP_003405695.1| - 0.032 14.3 0.0 0.084 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix SpoIIID PF12116.3 gi|284167417|ref|YP_003405695.1| - 0.032 14.1 0.1 0.14 12.0 0.0 2.1 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_Crp_2 PF13545.1 gi|284167417|ref|YP_003405695.1| - 0.044 13.5 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_34 PF13601.1 gi|284167417|ref|YP_003405695.1| - 0.066 13.2 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Sigma70_r4 PF04545.11 gi|284167417|ref|YP_003405695.1| - 0.067 12.5 0.4 2.1 7.7 0.0 2.8 3 0 0 3 3 3 0 Sigma-70, region 4 HTH_17 PF12728.2 gi|284167417|ref|YP_003405695.1| - 0.068 13.4 0.0 0.23 11.7 0.0 1.9 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_9 PF08221.6 gi|284167417|ref|YP_003405695.1| - 0.079 12.8 0.0 0.29 11.0 0.0 2.0 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain RPA_C PF08784.6 gi|284167417|ref|YP_003405695.1| - 0.09 13.2 0.2 0.36 11.2 0.0 2.1 2 1 0 2 2 1 0 Replication protein A C terminal RP-C PF03428.8 gi|284167417|ref|YP_003405695.1| - 0.1 12.0 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_23 PF13384.1 gi|284167417|ref|YP_003405695.1| - 0.12 12.1 0.0 0.38 10.4 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_26 PF13443.1 gi|284167417|ref|YP_003405695.1| - 0.12 12.5 0.0 0.3 11.3 0.0 1.7 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_22 PF13309.1 gi|284167417|ref|YP_003405695.1| - 0.12 12.1 0.0 0.48 10.2 0.0 2.1 1 1 0 1 1 1 0 HTH domain Lactonase PF10282.4 gi|284167418|ref|YP_003405696.1| - 2.9e-111 371.8 0.0 3.3e-111 371.7 0.0 1.0 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|284167418|ref|YP_003405696.1| - 5.5e-05 22.6 0.0 0.28 10.4 0.0 3.2 1 1 2 3 3 3 2 SMP-30/Gluconolaconase/LRE-like region DUF1513 PF07433.6 gi|284167418|ref|YP_003405696.1| - 0.0018 17.2 0.1 0.57 9.0 0.0 2.7 3 0 0 3 3 3 2 Protein of unknown function (DUF1513) Arylesterase PF01731.15 gi|284167418|ref|YP_003405696.1| - 0.0088 16.0 0.0 0.74 9.8 0.0 3.0 3 0 0 3 3 3 1 Arylesterase Flagellin_D3 PF08884.6 gi|284167418|ref|YP_003405696.1| - 0.11 12.6 0.1 0.27 11.4 0.1 1.6 1 0 0 1 1 1 0 Flagellin D3 domain DUF1900 PF08954.6 gi|284167418|ref|YP_003405696.1| - 0.15 11.5 0.0 14 5.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1900) Pox_M2 PF04887.7 gi|284167418|ref|YP_003405696.1| - 0.16 11.2 0.0 0.26 10.5 0.0 1.3 1 0 0 1 1 1 0 Poxvirus M2 protein NHL PF01436.16 gi|284167418|ref|YP_003405696.1| - 0.16 12.0 1.1 7.1 6.8 0.0 4.0 4 0 0 4 4 4 0 NHL repeat UxaC PF02614.9 gi|284167420|ref|YP_003405698.1| - 1.1e-135 452.8 0.0 1.3e-135 452.6 0.0 1.0 1 0 0 1 1 1 1 Glucuronate isomerase adh_short PF00106.20 gi|284167421|ref|YP_003405699.1| - 8.3e-30 103.9 0.2 1.1e-29 103.5 0.2 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167421|ref|YP_003405699.1| - 1.1e-27 97.3 0.0 1.3e-27 97.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167421|ref|YP_003405699.1| - 6.7e-09 35.6 0.6 1.1e-08 34.9 0.4 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|284167421|ref|YP_003405699.1| - 1.7e-06 27.6 0.0 3.2e-06 26.7 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|284167421|ref|YP_003405699.1| - 0.00048 20.1 0.9 0.00083 19.4 0.6 1.6 1 1 0 1 1 1 1 NADH(P)-binding Polysacc_synt_2 PF02719.10 gi|284167421|ref|YP_003405699.1| - 0.00069 18.5 0.1 0.0011 17.8 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein F420_oxidored PF03807.12 gi|284167421|ref|YP_003405699.1| - 0.001 19.4 0.9 0.0047 17.3 0.6 2.0 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|284167421|ref|YP_003405699.1| - 0.0016 18.2 0.1 0.0026 17.5 0.1 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.13 gi|284167421|ref|YP_003405699.1| - 0.011 15.7 0.3 0.021 14.8 0.2 1.4 1 0 0 1 1 1 0 TrkA-N domain NmrA PF05368.8 gi|284167421|ref|YP_003405699.1| - 0.021 14.0 0.2 0.039 13.2 0.1 1.5 1 1 0 1 1 1 0 NmrA-like family ELFV_dehydrog PF00208.16 gi|284167421|ref|YP_003405699.1| - 0.047 13.2 0.1 0.061 12.8 0.1 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.13 gi|284167421|ref|YP_003405699.1| - 0.06 12.9 0.4 0.084 12.5 0.3 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|284167421|ref|YP_003405699.1| - 0.083 12.7 0.1 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_4 PF07993.7 gi|284167421|ref|YP_003405699.1| - 0.092 11.6 0.0 0.17 10.8 0.0 1.5 1 0 0 1 1 1 0 Male sterility protein RmlD_sub_bind PF04321.12 gi|284167421|ref|YP_003405699.1| - 0.13 11.1 0.5 0.26 10.1 0.3 1.6 1 1 0 1 1 1 0 RmlD substrate binding domain AdoHcyase_NAD PF00670.16 gi|284167421|ref|YP_003405699.1| - 0.17 11.7 0.9 0.36 10.6 0.6 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain UxuA PF03786.8 gi|284167423|ref|YP_003405701.1| - 3.9e-86 288.7 0.1 3.1e-60 203.5 0.1 2.0 1 1 1 2 2 2 2 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.19 gi|284167423|ref|YP_003405701.1| - 4.6e-15 55.4 0.1 6.8e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Glyco_hydro_2_C PF02836.12 gi|284167424|ref|YP_003405702.1| - 1.3e-34 119.4 0.2 1.9e-34 118.9 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Glyco_hydro_2_N PF02837.13 gi|284167424|ref|YP_003405702.1| - 5.2e-32 110.7 0.5 1.1e-31 109.6 0.4 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Glyco_hydro_2 PF00703.16 gi|284167424|ref|YP_003405702.1| - 2.7e-06 27.7 0.5 7.1e-06 26.4 0.3 1.7 1 0 0 1 1 1 1 Glycosyl hydrolases family 2 BetaGal_dom4_5 PF13364.1 gi|284167424|ref|YP_003405702.1| - 1e-05 25.7 0.1 2.9e-05 24.3 0.1 1.8 1 0 0 1 1 1 1 Beta-galactosidase jelly roll domain DUF4434 PF14488.1 gi|284167424|ref|YP_003405702.1| - 0.055 13.1 0.3 0.11 12.1 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) Aldedh PF00171.17 gi|284167425|ref|YP_003405703.1| - 1e-167 558.1 0.4 1.2e-167 557.9 0.3 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DHDPS PF00701.17 gi|284167426|ref|YP_003405704.1| - 6.2e-38 130.0 0.0 7.7e-38 129.7 0.0 1.1 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family UxuA PF03786.8 gi|284167427|ref|YP_003405705.1| - 7.8e-54 182.5 0.0 2.4e-51 174.3 0.0 2.0 1 1 0 1 1 1 1 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.19 gi|284167427|ref|YP_003405705.1| - 7.9e-12 44.9 0.0 1.9e-11 43.6 0.0 1.7 1 1 1 2 2 2 1 Xylose isomerase-like TIM barrel SMI1_KNR4 PF09346.5 gi|284167427|ref|YP_003405705.1| - 0.11 12.5 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) Epimerase PF01370.16 gi|284167428|ref|YP_003405706.1| - 1e-20 74.1 0.0 1.5e-20 73.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|284167428|ref|YP_003405706.1| - 1.3e-12 47.2 0.0 2.4e-09 36.5 0.0 2.8 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|284167428|ref|YP_003405706.1| - 2.1e-12 46.3 0.0 2.8e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|284167428|ref|YP_003405706.1| - 5.1e-11 41.9 0.0 7.3e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|284167428|ref|YP_003405706.1| - 5.6e-10 39.5 0.0 8.3e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_4 PF07993.7 gi|284167428|ref|YP_003405706.1| - 1.3e-08 34.1 0.0 2.9e-08 32.9 0.0 1.5 2 0 0 2 2 2 1 Male sterility protein adh_short PF00106.20 gi|284167428|ref|YP_003405706.1| - 0.00027 20.9 0.0 0.0026 17.7 0.0 2.2 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|284167428|ref|YP_003405706.1| - 0.004 16.4 0.0 0.015 14.6 0.0 1.8 1 1 0 1 1 1 1 NmrA-like family Saccharop_dh PF03435.13 gi|284167428|ref|YP_003405706.1| - 0.01 14.8 0.0 0.014 14.4 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase DapB_N PF01113.15 gi|284167428|ref|YP_003405706.1| - 0.027 14.3 0.0 0.055 13.3 0.0 1.5 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Acetyltransf_6 PF13480.1 gi|284167428|ref|YP_003405706.1| - 0.074 13.0 0.1 5.9 6.8 0.0 2.3 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain zf-RNPHF PF08080.7 gi|284167428|ref|YP_003405706.1| - 0.08 12.4 1.5 0.9 9.0 0.0 2.6 2 0 0 2 2 2 0 RNPHF zinc finger KR PF08659.5 gi|284167428|ref|YP_003405706.1| - 0.13 11.9 0.0 4.2 6.9 0.0 2.3 1 1 0 1 1 1 0 KR domain MFS_1 PF07690.11 gi|284167429|ref|YP_003405707.1| - 1.7e-49 168.4 41.4 2.1e-35 122.1 9.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|284167429|ref|YP_003405707.1| - 5.4e-16 58.2 35.3 3.7e-12 45.5 6.5 3.1 2 1 1 3 3 3 3 Sugar (and other) transporter MFS_2 PF13347.1 gi|284167429|ref|YP_003405707.1| - 3.3e-15 55.4 26.0 1.3e-12 46.8 4.6 3.0 1 1 2 3 3 3 3 MFS/sugar transport protein MFS_3 PF05977.8 gi|284167429|ref|YP_003405707.1| - 9.9e-05 20.6 20.9 0.00054 18.1 14.5 1.9 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_1_like PF12832.2 gi|284167429|ref|YP_003405707.1| - 0.0027 17.4 8.6 0.4 10.4 0.3 3.5 3 0 0 3 3 3 2 MFS_1 like family Usp PF00582.21 gi|284167430|ref|YP_003405708.1| - 2.8e-17 63.2 0.9 8.8e-17 61.6 0.6 1.7 1 1 0 1 1 1 1 Universal stress protein family SBF PF01758.11 gi|284167431|ref|YP_003405709.1| - 8.4e-14 51.3 13.7 8.4e-14 51.3 9.5 2.1 1 1 1 2 2 2 1 Sodium Bile acid symporter family Glyoxalase PF00903.20 gi|284167432|ref|YP_003405710.1| - 5.5e-17 61.9 0.3 1.3e-10 41.3 0.0 2.4 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.2 gi|284167432|ref|YP_003405710.1| - 7.8e-15 55.4 0.6 2.7e-08 34.3 0.0 2.3 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase_4 PF13669.1 gi|284167432|ref|YP_003405710.1| - 0.0048 16.8 0.8 0.17 11.9 0.1 3.1 2 2 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CppA_N PF14506.1 gi|284167432|ref|YP_003405710.1| - 0.036 13.7 0.0 0.99 9.0 0.0 2.3 2 0 0 2 2 2 0 CppA N-terminal DDE_Tnp_IS240 PF13610.1 gi|284167433|ref|YP_003405711.1| - 1.1e-10 41.6 0.3 1.8e-10 40.9 0.1 1.5 2 0 0 2 2 2 1 DDE domain rve PF00665.21 gi|284167433|ref|YP_003405711.1| - 0.0039 17.3 0.6 0.0076 16.3 0.4 1.5 1 0 0 1 1 1 1 Integrase core domain UPF0158 PF03682.8 gi|284167433|ref|YP_003405711.1| - 0.0082 15.7 0.5 1 8.9 0.0 2.1 1 1 0 2 2 2 2 Uncharacterised protein family (UPF0158) Transglut_core3 PF13471.1 gi|284167433|ref|YP_003405711.1| - 0.031 14.0 0.1 2 8.2 0.0 2.2 2 0 0 2 2 2 0 Transglutaminase-like superfamily DNA_photolyase PF00875.13 gi|284167433|ref|YP_003405711.1| - 0.054 13.2 0.0 0.095 12.4 0.0 1.4 1 0 0 1 1 1 0 DNA photolyase Pyr_redox_2 PF07992.9 gi|284167434|ref|YP_003405712.1| - 1.6e-21 77.1 0.4 2e-21 76.8 0.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|284167434|ref|YP_003405712.1| - 3.5e-20 72.1 0.8 7.1e-17 61.5 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|284167434|ref|YP_003405712.1| - 3.6e-16 59.8 0.4 1.7e-11 44.5 0.0 2.9 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|284167434|ref|YP_003405712.1| - 2.1e-09 36.7 6.6 3.2e-05 22.9 0.2 4.1 3 1 1 4 4 4 3 FAD binding domain DAO PF01266.19 gi|284167434|ref|YP_003405712.1| - 4.5e-09 35.6 2.5 6.2e-05 22.0 0.1 3.6 4 0 0 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167434|ref|YP_003405712.1| - 1.4e-06 28.2 0.3 5e-05 23.2 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|284167434|ref|YP_003405712.1| - 1.9e-05 23.9 0.1 0.0012 17.9 0.0 2.3 2 0 0 2 2 2 1 Thi4 family HI0933_like PF03486.9 gi|284167434|ref|YP_003405712.1| - 2.2e-05 23.1 0.4 0.053 11.9 0.1 3.3 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_7 PF13241.1 gi|284167434|ref|YP_003405712.1| - 0.00015 21.9 0.1 0.0047 17.1 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_oxidored PF12831.2 gi|284167434|ref|YP_003405712.1| - 0.00019 20.6 0.8 0.00034 19.8 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|284167434|ref|YP_003405712.1| - 0.00077 18.4 4.6 0.023 13.5 0.1 3.4 4 0 0 4 4 4 1 Glucose inhibited division protein A K_oxygenase PF13434.1 gi|284167434|ref|YP_003405712.1| - 0.0047 15.8 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.7 gi|284167434|ref|YP_003405712.1| - 0.0053 15.7 0.5 3 6.6 0.2 3.1 3 0 0 3 3 3 1 Lycopene cyclase protein FAD_binding_3 PF01494.14 gi|284167434|ref|YP_003405712.1| - 0.024 13.7 6.5 0.94 8.4 0.2 3.4 3 1 1 4 4 4 0 FAD binding domain FMO-like PF00743.14 gi|284167434|ref|YP_003405712.1| - 0.13 10.4 0.0 2.8 6.0 0.0 2.0 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like Thioredoxin PF00085.15 gi|284167435|ref|YP_003405713.1| - 6e-28 96.5 0.0 7.2e-28 96.3 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|284167435|ref|YP_003405713.1| - 5.5e-11 42.6 0.0 1.4e-09 38.1 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|284167435|ref|YP_003405713.1| - 5.2e-07 29.6 0.0 9.5e-05 22.4 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_7 PF13899.1 gi|284167435|ref|YP_003405713.1| - 8.3e-07 28.9 0.0 1.6e-06 28.0 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like DSBA PF01323.15 gi|284167435|ref|YP_003405713.1| - 5.5e-05 22.8 0.1 0.00094 18.7 0.0 2.0 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_9 PF14595.1 gi|284167435|ref|YP_003405713.1| - 0.0003 20.3 0.0 0.00032 20.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.1 gi|284167435|ref|YP_003405713.1| - 0.0033 16.9 0.0 0.0042 16.6 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.16 gi|284167435|ref|YP_003405713.1| - 0.0077 15.9 0.0 0.024 14.3 0.0 1.7 1 1 0 1 1 1 1 AhpC/TSA family HyaE PF07449.6 gi|284167435|ref|YP_003405713.1| - 0.0094 15.8 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_3 PF13192.1 gi|284167435|ref|YP_003405713.1| - 0.037 13.8 0.0 0.051 13.3 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin domain DUF836 PF05768.9 gi|284167435|ref|YP_003405713.1| - 0.039 14.2 0.0 0.052 13.8 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.19 gi|284167435|ref|YP_003405713.1| - 0.063 13.2 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin Methyltransf_11 PF08241.7 gi|284167436|ref|YP_003405714.1| - 1.5e-21 76.6 0.0 2.2e-21 76.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|284167436|ref|YP_003405714.1| - 4.4e-20 71.7 0.0 5.6e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|284167436|ref|YP_003405714.1| - 1.6e-18 66.7 0.0 2e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|284167436|ref|YP_003405714.1| - 7.4e-14 52.0 0.0 1.3e-13 51.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167436|ref|YP_003405714.1| - 2e-13 50.8 0.0 3e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167436|ref|YP_003405714.1| - 2.4e-13 50.2 0.0 3.5e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167436|ref|YP_003405714.1| - 5.9e-13 48.8 0.0 7.7e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|284167436|ref|YP_003405714.1| - 7.8e-11 41.9 0.0 1.1e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|284167436|ref|YP_003405714.1| - 1.5e-09 37.9 0.0 2.9e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|284167436|ref|YP_003405714.1| - 5.4e-06 25.6 0.0 7.1e-06 25.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase GCD14 PF08704.5 gi|284167436|ref|YP_003405714.1| - 4.2e-05 23.1 0.0 5.7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit NodS PF05401.6 gi|284167436|ref|YP_003405714.1| - 0.00031 20.1 0.0 0.00057 19.3 0.0 1.4 1 1 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.9 gi|284167436|ref|YP_003405714.1| - 0.00033 20.0 0.0 0.002 17.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_3 PF01596.12 gi|284167436|ref|YP_003405714.1| - 0.00043 19.3 0.0 0.00071 18.6 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase DREV PF05219.7 gi|284167436|ref|YP_003405714.1| - 0.0028 16.5 0.0 0.0046 15.8 0.0 1.3 1 1 0 1 1 1 1 DREV methyltransferase Fibrillarin PF01269.12 gi|284167436|ref|YP_003405714.1| - 0.0034 16.3 0.0 0.0041 16.0 0.0 1.1 1 0 0 1 1 1 1 Fibrillarin Methyltransf_4 PF02390.12 gi|284167436|ref|YP_003405714.1| - 0.0037 16.3 0.0 0.013 14.5 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase DUF938 PF06080.7 gi|284167436|ref|YP_003405714.1| - 0.004 16.7 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF938) Methyltransf_24 PF13578.1 gi|284167436|ref|YP_003405714.1| - 0.013 16.3 0.0 0.024 15.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.1 gi|284167436|ref|YP_003405714.1| - 0.02 14.5 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PCP_red PF08369.5 gi|284167436|ref|YP_003405714.1| - 0.038 13.8 0.6 1.6 8.6 0.0 2.4 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit Methyltransf_8 PF05148.10 gi|284167436|ref|YP_003405714.1| - 0.098 12.2 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase CMAS PF02353.15 gi|284167436|ref|YP_003405714.1| - 0.15 11.0 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF302 PF03625.9 gi|284167437|ref|YP_003405715.1| - 2.8e-25 87.6 0.1 3.8e-25 87.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF302 Rhodanese PF00581.15 gi|284167438|ref|YP_003405716.1| - 0.0021 18.4 0.0 0.0021 18.4 0.0 1.0 1 0 0 1 1 1 1 Rhodanese-like domain EF-1_beta_acid PF10587.4 gi|284167438|ref|YP_003405716.1| - 0.21 11.7 5.6 0.48 10.6 3.9 1.6 1 0 0 1 1 1 0 Eukaryotic elongation factor 1 beta central acidic region DUF2892 PF11127.3 gi|284167439|ref|YP_003405717.1| - 1.3e-13 50.5 6.3 6.4e-13 48.3 4.3 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF2892) UPF0444 PF15475.1 gi|284167439|ref|YP_003405717.1| - 0.055 13.5 3.7 0.071 13.1 2.6 1.2 1 0 0 1 1 1 0 Transmembrane protein C12orf23, UPF0444 DUF2244 PF10003.4 gi|284167439|ref|YP_003405717.1| - 1.4 8.2 5.1 1.9 7.8 3.6 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) SdpI PF13630.1 gi|284167439|ref|YP_003405717.1| - 2.4 7.9 5.4 17 5.2 3.3 2.0 2 0 0 2 2 2 0 SdpI/YhfL protein family IncA PF04156.9 gi|284167439|ref|YP_003405717.1| - 8.9 5.8 14.2 11 5.5 9.8 1.1 1 0 0 1 1 1 0 IncA protein Pyridox_ox_2 PF12900.2 gi|284167440|ref|YP_003405718.1| - 1.5e-14 54.0 0.0 1.7e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase adh_short PF00106.20 gi|284167441|ref|YP_003405719.1| - 1.3e-36 126.0 3.0 1.6e-36 125.7 2.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|284167441|ref|YP_003405719.1| - 1.5e-29 103.4 0.0 1.8e-29 103.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|284167441|ref|YP_003405719.1| - 2.3e-17 63.2 0.6 3.1e-17 62.8 0.4 1.2 1 0 0 1 1 1 1 KR domain 3Beta_HSD PF01073.14 gi|284167441|ref|YP_003405719.1| - 4.4e-05 22.3 0.6 5.9e-05 21.8 0.4 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.16 gi|284167441|ref|YP_003405719.1| - 9.9e-05 21.8 0.3 0.00025 20.5 0.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.3 gi|284167441|ref|YP_003405719.1| - 0.002 17.8 0.0 0.005 16.5 0.0 1.7 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NAD_binding_10 PF13460.1 gi|284167441|ref|YP_003405719.1| - 0.005 16.8 1.9 0.0098 15.9 1.3 1.6 1 1 0 1 1 1 1 NADH(P)-binding 3HCDH_N PF02737.13 gi|284167441|ref|YP_003405719.1| - 0.0091 15.6 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.10 gi|284167441|ref|YP_003405719.1| - 0.088 11.6 0.1 0.12 11.2 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|284167441|ref|YP_003405719.1| - 0.12 11.3 0.0 0.2 10.5 0.0 1.4 1 1 0 1 1 1 0 Male sterility protein Abhydrolase_6 PF12697.2 gi|284167442|ref|YP_003405720.1| - 1.5e-36 126.4 0.0 1.7e-36 126.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|284167442|ref|YP_003405720.1| - 6.3e-19 68.4 0.0 7.9e-18 64.8 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|284167442|ref|YP_003405720.1| - 1.1e-16 60.8 0.0 2.5e-16 59.7 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.15 gi|284167442|ref|YP_003405720.1| - 6.1e-07 29.9 0.1 7e-07 29.6 0.0 1.3 1 1 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.3 gi|284167442|ref|YP_003405720.1| - 5e-05 23.0 0.1 0.00011 21.9 0.1 1.6 1 0 0 1 1 1 1 Putative lysophospholipase PGAP1 PF07819.8 gi|284167442|ref|YP_003405720.1| - 0.013 15.1 0.0 0.07 12.7 0.0 2.1 1 1 0 1 1 1 0 PGAP1-like protein DUF3530 PF12048.3 gi|284167442|ref|YP_003405720.1| - 0.014 14.4 0.0 0.029 13.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3530) DUF2305 PF10230.4 gi|284167442|ref|YP_003405720.1| - 0.053 12.9 0.0 0.36 10.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2305) FSH1 PF03959.8 gi|284167442|ref|YP_003405720.1| - 0.094 12.1 0.0 0.81 9.0 0.0 2.1 1 1 1 2 2 2 0 Serine hydrolase (FSH1) SBP56 PF05694.6 gi|284167444|ref|YP_003405722.1| - 4.7e-195 648.4 0.1 5.3e-195 648.2 0.1 1.0 1 0 0 1 1 1 1 56kDa selenium binding protein (SBP56) Lactonase PF10282.4 gi|284167444|ref|YP_003405722.1| - 0.0046 16.0 0.0 0.36 9.8 0.0 2.5 2 1 0 2 2 2 2 Lactonase, 7-bladed beta-propeller Beta_propel PF09826.4 gi|284167444|ref|YP_003405722.1| - 0.0086 14.4 0.0 0.075 11.3 0.0 1.9 2 0 0 2 2 2 1 Beta propeller domain LVIVD PF08309.6 gi|284167444|ref|YP_003405722.1| - 0.09 11.7 0.9 1.5 7.8 0.0 2.7 3 0 0 3 3 3 0 LVIVD repeat MarR_2 PF12802.2 gi|284167445|ref|YP_003405723.1| - 0.0048 16.5 1.4 0.013 15.1 0.1 2.3 3 0 0 3 3 3 1 MarR family HTH_IclR PF09339.5 gi|284167445|ref|YP_003405723.1| - 0.0088 15.6 0.2 0.022 14.3 0.2 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain MFS_1 PF07690.11 gi|284167446|ref|YP_003405724.1| - 1e-40 139.5 90.5 7.3e-36 123.6 34.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|284167446|ref|YP_003405724.1| - 2.2e-06 26.3 26.9 0.00037 19.0 4.6 2.2 1 1 1 2 2 2 2 MFS/sugar transport protein LacY_symp PF01306.14 gi|284167446|ref|YP_003405724.1| - 0.00014 20.5 0.6 0.00014 20.5 0.4 2.0 2 0 0 2 2 2 1 LacY proton/sugar symporter R3H PF01424.17 gi|284167448|ref|YP_003405726.1| - 0.099 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 R3H domain Sua5_yciO_yrdC PF01300.13 gi|284167449|ref|YP_003405727.1| - 0.092 11.9 0.0 0.11 11.7 0.0 1.2 1 1 0 1 1 1 0 Telomere recombination HTH_10 PF04967.7 gi|284167450|ref|YP_003405728.1| - 3.1e-14 52.2 0.1 5.4e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_AsnC-type PF13404.1 gi|284167450|ref|YP_003405728.1| - 0.094 12.2 1.0 0.18 11.3 0.1 1.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain MarR_2 PF12802.2 gi|284167450|ref|YP_003405728.1| - 0.094 12.3 0.2 0.29 10.8 0.1 1.9 1 1 0 1 1 1 0 MarR family PAS_4 PF08448.5 gi|284167451|ref|YP_003405729.1| - 3.8e-33 113.7 10.4 1e-12 48.0 0.1 3.8 4 0 0 4 4 3 3 PAS fold PAS_9 PF13426.1 gi|284167451|ref|YP_003405729.1| - 1.2e-25 89.8 0.4 2.3e-13 50.4 0.0 3.9 3 0 0 3 3 3 3 PAS domain PAS PF00989.19 gi|284167451|ref|YP_003405729.1| - 7.7e-23 80.4 0.5 1e-13 51.0 0.0 3.8 3 0 0 3 3 3 2 PAS fold HTH_10 PF04967.7 gi|284167451|ref|YP_003405729.1| - 1e-18 66.6 0.0 9.9e-18 63.4 0.0 2.4 2 0 0 2 2 2 1 HTH DNA binding domain GAF_2 PF13185.1 gi|284167451|ref|YP_003405729.1| - 3.7e-18 66.4 0.3 5.4e-16 59.4 0.0 2.7 2 0 0 2 2 2 1 GAF domain PAS_8 PF13188.1 gi|284167451|ref|YP_003405729.1| - 2.9e-14 52.2 0.6 4.9e-09 35.7 0.0 3.4 3 0 0 3 3 3 2 PAS domain PAS_10 PF13596.1 gi|284167451|ref|YP_003405729.1| - 9.2e-09 35.5 0.2 0.036 14.3 0.0 4.7 4 0 0 4 4 4 2 PAS domain HTH_20 PF12840.2 gi|284167451|ref|YP_003405729.1| - 1.5e-07 31.1 0.0 0.019 14.7 0.0 3.0 2 0 0 2 2 2 2 Helix-turn-helix domain PAS_7 PF12860.2 gi|284167451|ref|YP_003405729.1| - 7e-07 29.2 2.5 0.0041 17.1 0.1 4.1 5 1 0 5 5 2 2 PAS fold Sigma70_r4 PF04545.11 gi|284167451|ref|YP_003405729.1| - 1.2e-06 27.6 0.0 0.00028 20.1 0.0 2.9 2 0 0 2 2 2 1 Sigma-70, region 4 PAS_3 PF08447.6 gi|284167451|ref|YP_003405729.1| - 1.9e-06 27.8 0.0 3.1e-05 24.0 0.0 3.0 3 0 0 3 3 3 1 PAS fold Sigma70_r4_2 PF08281.7 gi|284167451|ref|YP_003405729.1| - 6e-06 25.6 0.0 0.0052 16.2 0.0 3.4 2 1 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.7 gi|284167451|ref|YP_003405729.1| - 1.6e-05 24.4 0.0 0.037 13.6 0.0 2.5 2 0 0 2 2 2 2 HTH domain HTH_17 PF12728.2 gi|284167451|ref|YP_003405729.1| - 1.7e-05 24.9 0.1 0.1 12.8 0.0 2.7 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_24 PF13412.1 gi|284167451|ref|YP_003405729.1| - 6.2e-05 22.2 0.0 0.073 12.4 0.0 3.3 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding TetR_N PF00440.18 gi|284167451|ref|YP_003405729.1| - 8.8e-05 22.0 0.0 0.36 10.5 0.0 2.7 2 0 0 2 2 2 2 Bacterial regulatory proteins, tetR family GAF_3 PF13492.1 gi|284167451|ref|YP_003405729.1| - 0.001 19.1 0.0 0.0031 17.6 0.0 1.9 1 0 0 1 1 1 1 GAF domain HTH_23 PF13384.1 gi|284167451|ref|YP_003405729.1| - 0.0011 18.5 0.0 1.2 8.9 0.0 2.7 2 0 0 2 2 2 1 Homeodomain-like domain TrmB PF01978.14 gi|284167451|ref|YP_003405729.1| - 0.0014 18.3 0.0 0.012 15.3 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|284167451|ref|YP_003405729.1| - 0.0015 18.1 0.0 0.0034 16.9 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|284167451|ref|YP_003405729.1| - 0.0051 16.4 0.0 1.5 8.5 0.0 2.6 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.14 gi|284167451|ref|YP_003405729.1| - 0.03 14.2 0.0 2.1 8.3 0.0 2.5 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_AsnC-type PF13404.1 gi|284167451|ref|YP_003405729.1| - 0.046 13.2 0.6 26 4.4 0.0 3.4 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain GerE PF00196.14 gi|284167451|ref|YP_003405729.1| - 0.052 12.8 0.0 3.4 7.0 0.0 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_30 PF13556.1 gi|284167451|ref|YP_003405729.1| - 0.12 11.9 0.7 2.5 7.7 0.0 3.2 3 0 0 3 3 3 0 PucR C-terminal helix-turn-helix domain HTH_34 PF13601.1 gi|284167452|ref|YP_003405730.1| - 0.048 13.6 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cupin_2 PF07883.6 gi|284167453|ref|YP_003405731.1| - 5e-17 61.1 0.2 7.1e-17 60.6 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|284167453|ref|YP_003405731.1| - 8.6e-07 28.7 0.0 1e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.17 gi|284167453|ref|YP_003405731.1| - 0.0094 15.3 0.0 0.03 13.7 0.0 1.7 1 1 0 2 2 2 1 Cupin DUF4563 PF15124.1 gi|284167453|ref|YP_003405731.1| - 0.074 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4563) Cupin_3 PF05899.7 gi|284167453|ref|YP_003405731.1| - 0.078 12.3 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Lactamase_B_3 PF13483.1 gi|284167453|ref|YP_003405731.1| - 0.087 12.5 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Beta-lactamase superfamily domain MannoseP_isomer PF01050.13 gi|284167453|ref|YP_003405731.1| - 0.093 12.3 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Methyltransf_31 PF13847.1 gi|284167455|ref|YP_003405733.1| - 7.2e-20 71.1 0.0 9.8e-20 70.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167455|ref|YP_003405733.1| - 5e-18 65.7 0.0 1.2e-17 64.4 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|284167455|ref|YP_003405733.1| - 3.5e-15 56.2 0.0 1.4e-14 54.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|284167455|ref|YP_003405733.1| - 1.1e-12 48.1 0.0 7.5e-12 45.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167455|ref|YP_003405733.1| - 2e-11 43.8 0.0 3.7e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167455|ref|YP_003405733.1| - 2.2e-10 40.8 0.1 4.5e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|284167455|ref|YP_003405733.1| - 1.9e-09 37.5 0.3 1.1e-08 35.1 0.1 2.0 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|284167455|ref|YP_003405733.1| - 5.3e-09 35.6 0.0 8.9e-09 34.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.15 gi|284167455|ref|YP_003405733.1| - 1.8e-07 30.5 0.0 2.7e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.12 gi|284167455|ref|YP_003405733.1| - 2.1e-06 26.9 0.0 4.1e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.13 gi|284167455|ref|YP_003405733.1| - 1.8e-05 23.9 0.0 2.6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.8 gi|284167455|ref|YP_003405733.1| - 8.6e-05 21.7 0.0 0.00016 20.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|284167455|ref|YP_003405733.1| - 0.00036 20.2 0.0 0.00061 19.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|284167455|ref|YP_003405733.1| - 0.00043 19.8 0.0 0.00067 19.2 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PCMT PF01135.14 gi|284167455|ref|YP_003405733.1| - 0.00046 19.7 0.0 0.00079 19.0 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_2 PF00891.13 gi|284167455|ref|YP_003405733.1| - 0.00053 19.2 0.1 0.0018 17.5 0.1 1.9 1 1 0 1 1 1 1 O-methyltransferase Methyltransf_3 PF01596.12 gi|284167455|ref|YP_003405733.1| - 0.001 18.1 0.0 0.0018 17.3 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase FmrO PF07091.6 gi|284167455|ref|YP_003405733.1| - 0.0021 17.0 0.1 0.0075 15.2 0.0 1.7 2 0 0 2 2 2 1 Ribosomal RNA methyltransferase (FmrO) UPF0020 PF01170.13 gi|284167455|ref|YP_003405733.1| - 0.0032 17.0 0.0 0.0051 16.4 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 GidB PF02527.10 gi|284167455|ref|YP_003405733.1| - 0.0084 15.2 0.0 0.016 14.3 0.0 1.4 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_9 PF08003.6 gi|284167455|ref|YP_003405733.1| - 0.01 14.5 0.0 0.018 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_24 PF13578.1 gi|284167455|ref|YP_003405733.1| - 0.059 14.1 0.2 0.21 12.4 0.1 2.0 2 0 0 2 2 2 0 Methyltransferase domain TrmB PF01978.14 gi|284167455|ref|YP_003405733.1| - 0.062 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB NodS PF05401.6 gi|284167455|ref|YP_003405733.1| - 0.13 11.6 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) GCD14 PF08704.5 gi|284167455|ref|YP_003405733.1| - 0.15 11.4 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF1059 PF06348.6 gi|284167456|ref|YP_003405734.1| - 4.2e-06 26.4 1.5 4.3e-06 26.4 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) FAD_binding_3 PF01494.14 gi|284167457|ref|YP_003405735.1| - 3.1e-08 33.0 0.1 0.00022 20.3 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.9 gi|284167457|ref|YP_003405735.1| - 6.1e-05 21.8 0.0 0.21 10.1 0.0 3.0 3 0 0 3 3 3 2 Tryptophan halogenase Pyr_redox_2 PF07992.9 gi|284167457|ref|YP_003405735.1| - 0.00011 22.1 0.0 0.00044 20.1 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|284167457|ref|YP_003405735.1| - 0.00077 18.4 0.1 0.008 15.0 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.19 gi|284167457|ref|YP_003405735.1| - 0.0012 17.8 0.9 0.14 11.0 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase SE PF08491.5 gi|284167457|ref|YP_003405735.1| - 0.0036 16.1 0.0 0.0066 15.3 0.0 1.4 1 0 0 1 1 1 1 Squalene epoxidase Pyr_redox_3 PF13738.1 gi|284167457|ref|YP_003405735.1| - 0.0039 17.2 0.0 0.42 10.6 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|284167457|ref|YP_003405735.1| - 0.015 14.4 0.1 0.037 13.1 0.0 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167457|ref|YP_003405735.1| - 0.088 12.8 0.0 0.52 10.3 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|284167457|ref|YP_003405735.1| - 0.14 11.2 0.1 0.74 8.8 0.0 2.1 2 0 0 2 2 2 0 Thi4 family Usp PF00582.21 gi|284167458|ref|YP_003405736.1| - 6.2e-63 211.1 13.7 1e-33 116.4 2.8 2.0 2 0 0 2 2 2 2 Universal stress protein family SRP54 PF00448.17 gi|284167458|ref|YP_003405736.1| - 0.0035 16.8 0.1 0.087 12.2 0.0 2.4 1 1 2 3 3 3 1 SRP54-type protein, GTPase domain Bac_thur_toxin PF01338.13 gi|284167458|ref|YP_003405736.1| - 0.0042 16.3 0.0 0.021 14.0 0.0 1.8 2 0 0 2 2 2 1 Bacillus thuringiensis toxin ABC2_membrane_2 PF12679.2 gi|284167460|ref|YP_003405738.1| - 2.6e-16 59.3 12.1 4.5e-16 58.5 8.4 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|284167460|ref|YP_003405738.1| - 1.2e-11 44.2 9.0 1.7e-11 43.7 6.3 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|284167460|ref|YP_003405738.1| - 8e-09 34.9 7.4 8e-09 34.9 5.1 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|284167460|ref|YP_003405738.1| - 2e-05 23.9 4.3 6.7e-05 22.2 2.7 1.9 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|284167460|ref|YP_003405738.1| - 0.0002 20.5 11.2 0.0002 20.5 7.7 1.7 1 1 0 1 1 1 1 ABC-2 type transporter NPCBM_assoc PF10633.4 gi|284167461|ref|YP_003405739.1| - 1.1e-07 31.8 12.4 0.0027 17.7 0.6 3.6 2 1 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|284167461|ref|YP_003405739.1| - 0.0002 21.3 4.3 0.0002 21.3 3.0 5.4 5 1 1 6 6 6 1 Domain of unknown function DUF11 DUF2393 PF09624.5 gi|284167461|ref|YP_003405739.1| - 0.00032 20.2 0.0 0.0055 16.2 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2393) CARDB PF07705.6 gi|284167461|ref|YP_003405739.1| - 0.00066 19.6 5.8 0.41 10.7 1.9 2.8 2 1 0 2 2 2 2 CARDB Transglut_C PF00927.17 gi|284167461|ref|YP_003405739.1| - 0.0023 17.9 0.0 0.27 11.3 0.0 2.4 2 0 0 2 2 2 1 Transglutaminase family, C-terminal ig like domain Fn3-like PF14310.1 gi|284167461|ref|YP_003405739.1| - 0.011 15.6 1.1 1.1 9.2 0.0 3.3 3 0 0 3 3 3 0 Fibronectin type III-like domain Gryzun PF07919.7 gi|284167461|ref|YP_003405739.1| - 0.047 12.0 0.0 0.086 11.1 0.0 1.4 1 0 0 1 1 1 0 Gryzun, putative trafficking through Golgi ABC_tran PF00005.22 gi|284167462|ref|YP_003405740.1| - 1.1e-25 90.4 0.0 1.7e-25 89.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167462|ref|YP_003405740.1| - 3.2e-12 47.0 0.1 3e-06 27.4 0.0 2.3 1 1 0 2 2 2 2 AAA domain Usp PF00582.21 gi|284167462|ref|YP_003405740.1| - 2.9e-06 27.5 0.1 6.5e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 Universal stress protein family AAA_23 PF13476.1 gi|284167462|ref|YP_003405740.1| - 0.0019 18.5 0.0 0.0028 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|284167462|ref|YP_003405740.1| - 0.004 16.6 0.1 0.0073 15.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.1 gi|284167462|ref|YP_003405740.1| - 0.022 14.6 1.4 0.34 10.7 0.0 2.9 3 0 0 3 3 3 0 AAA domain DUF258 PF03193.11 gi|284167462|ref|YP_003405740.1| - 0.031 13.4 0.0 0.051 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 DUF4162 PF13732.1 gi|284167462|ref|YP_003405740.1| - 0.14 12.6 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) DUF1509 PF07420.6 gi|284167462|ref|YP_003405740.1| - 0.15 11.3 1.6 0.31 10.2 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Usp PF00582.21 gi|284167463|ref|YP_003405741.1| - 2.3e-27 95.8 2.2 2.7e-27 95.6 1.6 1.0 1 0 0 1 1 1 1 Universal stress protein family GARS_N PF02844.10 gi|284167463|ref|YP_003405741.1| - 0.078 13.4 0.0 0.24 11.8 0.0 1.9 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain Pyridox_ox_2 PF12900.2 gi|284167464|ref|YP_003405742.1| - 1.6e-15 57.1 0.0 1.9e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|284167464|ref|YP_003405742.1| - 0.0099 15.8 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase MaoC_dehydratas PF01575.14 gi|284167465|ref|YP_003405743.1| - 1.8e-21 75.8 0.0 2.9e-21 75.1 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.1 gi|284167465|ref|YP_003405743.1| - 2.5e-07 30.5 0.1 8e-07 28.9 0.1 1.9 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.17 gi|284167465|ref|YP_003405743.1| - 0.0022 18.0 0.1 0.0078 16.3 0.1 2.0 1 1 1 2 2 2 1 Thioesterase superfamily 4HBT_2 PF13279.1 gi|284167465|ref|YP_003405743.1| - 0.043 14.2 0.0 0.068 13.6 0.0 1.4 1 0 0 1 1 1 0 Thioesterase-like superfamily TruB_C PF09142.6 gi|284167465|ref|YP_003405743.1| - 0.054 13.1 0.1 0.15 11.6 0.1 1.8 1 0 0 1 1 1 0 tRNA Pseudouridine synthase II, C terminal Usp PF00582.21 gi|284167466|ref|YP_003405744.1| - 3.2e-39 134.3 1.2 1.7e-23 83.3 0.1 2.5 2 1 0 2 2 2 2 Universal stress protein family Usp PF00582.21 gi|284167467|ref|YP_003405745.1| - 5.4e-07 29.8 2.1 5.5e-07 29.8 1.5 1.0 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|284167468|ref|YP_003405746.1| - 3e-34 118.1 0.2 3.9e-34 117.8 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family Flavodoxin_5 PF12724.2 gi|284167469|ref|YP_003405747.1| - 5.1e-38 130.2 0.0 6.7e-38 129.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|284167469|ref|YP_003405747.1| - 4e-08 33.3 0.1 5.8e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|284167469|ref|YP_003405747.1| - 5.7e-05 22.6 0.0 9.5e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain FMN_red PF03358.10 gi|284167469|ref|YP_003405747.1| - 0.015 14.8 0.0 0.027 13.9 0.0 1.5 1 1 0 1 1 1 0 NADPH-dependent FMN reductase DUF2984 PF11203.3 gi|284167469|ref|YP_003405747.1| - 0.033 14.2 0.2 0.08 13.0 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2984) AAA_19 PF13245.1 gi|284167469|ref|YP_003405747.1| - 0.11 12.3 0.0 0.26 11.0 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain TauE PF01925.14 gi|284167470|ref|YP_003405748.1| - 2.3e-39 135.2 34.8 2.3e-39 135.2 24.1 1.9 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE DUF656 PF04920.7 gi|284167470|ref|YP_003405748.1| - 0.14 11.9 1.3 18 5.0 0.0 3.4 2 1 1 3 3 3 0 Family of unknown function (DUF656) Abi PF02517.11 gi|284167471|ref|YP_003405749.1| - 3e-13 49.7 7.7 3e-13 49.7 5.3 2.8 3 0 0 3 3 3 1 CAAX protease self-immunity DUF318 PF03773.8 gi|284167472|ref|YP_003405750.1| - 1.4e-41 142.4 19.4 2.5e-41 141.6 13.4 1.4 1 1 0 1 1 1 1 Predicted permease YHS PF04945.8 gi|284167472|ref|YP_003405750.1| - 1.6e-18 66.2 4.8 5.5e-14 51.7 0.8 2.4 2 0 0 2 2 2 2 YHS domain zf-FCS PF06467.9 gi|284167472|ref|YP_003405750.1| - 1.4e-05 24.6 0.7 0.023 14.3 0.1 2.3 2 0 0 2 2 2 2 MYM-type Zinc finger with FCS sequence motif Arc_trans_TRASH PF08394.5 gi|284167472|ref|YP_003405750.1| - 0.064 13.4 0.2 0.17 12.0 0.1 1.7 1 0 0 1 1 1 0 Archaeal TRASH domain DUF2116 PF09889.4 gi|284167472|ref|YP_003405750.1| - 1.8 8.4 0.0 1.8 8.4 0.0 4.1 4 0 0 4 4 4 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) MFS_1 PF07690.11 gi|284167474|ref|YP_003405752.1| - 3.5e-37 127.9 37.8 1.2e-19 70.3 12.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|284167474|ref|YP_003405752.1| - 3.3e-05 22.6 23.4 0.0037 15.8 6.8 2.4 1 1 1 2 2 2 2 Sugar (and other) transporter DUF2273 PF10031.4 gi|284167474|ref|YP_003405752.1| - 0.041 13.5 0.5 0.041 13.5 0.4 4.0 5 0 0 5 5 5 0 Small integral membrane protein (DUF2273) Lactamase_B PF00753.22 gi|284167475|ref|YP_003405753.1| - 3e-23 82.5 7.9 5.7e-23 81.5 5.5 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.15 gi|284167475|ref|YP_003405753.1| - 8.7e-15 55.0 0.0 2.8e-14 53.4 0.0 1.9 2 0 0 2 2 2 1 Rhodanese-like domain Lactamase_B_2 PF12706.2 gi|284167475|ref|YP_003405753.1| - 0.0011 18.5 0.8 0.0011 18.5 0.5 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain HTH_10 PF04967.7 gi|284167476|ref|YP_003405754.1| - 7.5e-21 73.4 0.3 1.3e-20 72.6 0.2 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.1 gi|284167476|ref|YP_003405754.1| - 0.075 12.4 0.1 0.3 10.4 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|284167476|ref|YP_003405754.1| - 0.091 12.3 0.1 0.24 11.0 0.1 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF1469 PF07332.6 gi|284167477|ref|YP_003405755.1| - 0.77 9.5 4.2 0.96 9.1 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) FtsX PF02687.16 gi|284167477|ref|YP_003405755.1| - 0.83 9.4 7.8 0.92 9.2 5.4 1.1 1 0 0 1 1 1 0 FtsX-like permease family EIID-AGA PF03613.9 gi|284167477|ref|YP_003405755.1| - 1.4 7.8 5.2 1.9 7.3 3.4 1.3 1 1 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component Pyridox_ox_2 PF12900.2 gi|284167478|ref|YP_003405756.1| - 1.9e-18 66.6 0.3 2.1e-18 66.5 0.2 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|284167478|ref|YP_003405756.1| - 0.00012 21.9 0.0 0.00016 21.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF3650 PF12368.3 gi|284167478|ref|YP_003405756.1| - 0.017 14.6 0.1 0.03 13.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3650) Polyketide_cyc2 PF10604.4 gi|284167479|ref|YP_003405757.1| - 1.7 8.7 12.4 0.41 10.8 2.3 3.6 2 2 0 2 2 2 0 Polyketide cyclase / dehydrase and lipid transport Exosortase_EpsH PF09721.5 gi|284167480|ref|YP_003405758.1| - 0.41 9.8 4.4 0.23 10.6 1.1 1.5 1 1 1 2 2 2 0 Transmembrane exosortase (Exosortase_EpsH) Git3 PF11710.3 gi|284167481|ref|YP_003405759.1| - 0.039 13.5 0.1 0.062 12.8 0.1 1.3 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 ALG3 PF05208.8 gi|284167482|ref|YP_003405760.1| - 1.3 8.2 10.4 0.15 11.3 4.3 1.6 1 1 0 1 1 1 0 ALG3 protein VIT1 PF01988.14 gi|284167483|ref|YP_003405761.1| - 7.2e-20 71.3 18.3 6.6e-11 42.1 7.1 2.0 1 1 1 2 2 2 2 VIT family DUF2453 PF10507.4 gi|284167483|ref|YP_003405761.1| - 0.023 14.5 0.2 0.064 13.0 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2453) BTP PF05232.7 gi|284167483|ref|YP_003405761.1| - 0.98 9.2 5.4 7 6.4 0.0 2.7 2 1 1 3 3 3 0 Bacterial Transmembrane Pair family Romo1 PF10247.4 gi|284167483|ref|YP_003405761.1| - 2.9 8.1 0.0 2.9 8.1 0.0 3.1 3 1 1 4 4 4 0 Reactive mitochondrial oxygen species modulator 1 DUF211 PF02680.9 gi|284167484|ref|YP_003405762.1| - 3.8e-32 109.9 0.2 4.1e-32 109.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Cation_ATPase_C PF00689.16 gi|284167485|ref|YP_003405763.1| - 3.1e-07 30.1 0.4 3.5e-07 29.9 0.3 1.1 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus GAF_2 PF13185.1 gi|284167486|ref|YP_003405764.1| - 1.4e-28 100.2 10.5 2.9e-16 60.2 0.3 3.5 4 0 0 4 4 4 2 GAF domain GAF PF01590.21 gi|284167486|ref|YP_003405764.1| - 5.5e-23 81.7 1.1 1.2e-13 51.4 0.2 3.0 2 0 0 2 2 2 2 GAF domain PAS_9 PF13426.1 gi|284167486|ref|YP_003405764.1| - 2.5e-22 79.2 0.3 4.8e-13 49.3 0.0 2.9 3 0 0 3 3 2 2 PAS domain HTH_10 PF04967.7 gi|284167486|ref|YP_003405764.1| - 2.9e-22 77.9 0.0 3.4e-21 74.5 0.0 2.5 2 0 0 2 2 2 1 HTH DNA binding domain GAF_3 PF13492.1 gi|284167486|ref|YP_003405764.1| - 8.6e-20 71.1 0.3 4.1e-12 46.3 0.1 2.9 2 0 0 2 2 2 2 GAF domain PAS_4 PF08448.5 gi|284167486|ref|YP_003405764.1| - 3e-19 69.0 10.8 2.2e-12 46.9 0.3 3.5 3 0 0 3 3 3 2 PAS fold PAS PF00989.19 gi|284167486|ref|YP_003405764.1| - 1e-18 67.1 0.1 3.5e-11 42.8 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|284167486|ref|YP_003405764.1| - 1.9e-12 46.5 0.3 4e-08 32.8 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.2 gi|284167486|ref|YP_003405764.1| - 2.4e-10 40.4 0.0 0.00013 21.9 0.1 3.0 2 0 0 2 2 2 2 PAS fold PAS_10 PF13596.1 gi|284167486|ref|YP_003405764.1| - 0.0022 18.2 0.0 0.48 10.7 0.0 2.9 3 0 0 3 3 3 1 PAS domain MarR_2 PF12802.2 gi|284167486|ref|YP_003405764.1| - 0.0072 15.9 3.5 6.8 6.4 0.0 3.7 3 0 0 3 3 3 1 MarR family PAS_3 PF08447.6 gi|284167486|ref|YP_003405764.1| - 0.0074 16.3 0.0 0.058 13.5 0.0 2.5 2 0 0 2 2 2 1 PAS fold HTH_20 PF12840.2 gi|284167486|ref|YP_003405764.1| - 0.014 15.1 0.7 0.91 9.3 0.4 3.0 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.14 gi|284167486|ref|YP_003405764.1| - 0.028 14.1 1.0 0.16 11.6 0.1 2.7 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB NTP_transf_2 PF01909.18 gi|284167489|ref|YP_003405767.1| - 9.8e-11 41.8 0.3 1.7e-10 41.0 0.2 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain HTH_11 PF08279.7 gi|284167489|ref|YP_003405767.1| - 6.4e-09 35.3 0.0 1.5e-08 34.1 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.5 gi|284167489|ref|YP_003405767.1| - 7.8e-05 22.1 0.0 0.00017 21.0 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|284167489|ref|YP_003405767.1| - 0.00041 19.9 0.9 0.00089 18.8 0.1 2.0 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 gi|284167489|ref|YP_003405767.1| - 0.0021 17.7 0.0 0.0041 16.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GntR PF00392.16 gi|284167489|ref|YP_003405767.1| - 0.0085 15.5 0.1 0.026 13.9 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.2 gi|284167489|ref|YP_003405767.1| - 0.0089 15.8 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|284167489|ref|YP_003405767.1| - 0.027 14.1 0.0 0.082 12.5 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain DUF294 PF03445.8 gi|284167489|ref|YP_003405767.1| - 0.029 13.9 0.1 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 MarR PF01047.17 gi|284167489|ref|YP_003405767.1| - 0.045 13.4 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.1 gi|284167489|ref|YP_003405767.1| - 0.055 13.2 0.1 0.15 11.8 0.0 1.8 2 0 0 2 2 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|284167489|ref|YP_003405767.1| - 0.072 12.4 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_41 PF14502.1 gi|284167489|ref|YP_003405767.1| - 0.09 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|284167489|ref|YP_003405767.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_CodY PF08222.6 gi|284167489|ref|YP_003405767.1| - 0.13 11.5 0.0 0.35 10.2 0.0 1.7 2 0 0 2 2 2 0 CodY helix-turn-helix domain DUF302 PF03625.9 gi|284167490|ref|YP_003405768.1| - 3.4e-19 68.1 0.0 6.3e-19 67.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF302 Methyltransf_11 PF08241.7 gi|284167491|ref|YP_003405769.1| - 7.1e-19 68.0 0.0 1.1e-18 67.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|284167491|ref|YP_003405769.1| - 1.5e-11 44.1 0.0 1.8e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167491|ref|YP_003405769.1| - 3.4e-11 43.6 0.0 5.5e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167491|ref|YP_003405769.1| - 4.1e-10 39.6 0.0 7.7e-10 38.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167491|ref|YP_003405769.1| - 4.4e-09 36.6 0.0 7e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|284167491|ref|YP_003405769.1| - 4.7e-08 33.0 0.2 8e-08 32.3 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|284167491|ref|YP_003405769.1| - 8.2e-08 31.6 0.0 1.3e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|284167491|ref|YP_003405769.1| - 1.5e-06 28.6 0.0 2.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|284167491|ref|YP_003405769.1| - 2.7e-05 23.3 0.0 3.6e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DREV PF05219.7 gi|284167491|ref|YP_003405769.1| - 5e-05 22.3 0.0 8.2e-05 21.6 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase FtsJ PF01728.14 gi|284167491|ref|YP_003405769.1| - 0.0004 20.4 0.0 0.00052 20.0 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_8 PF05148.10 gi|284167491|ref|YP_003405769.1| - 0.00042 20.0 0.0 0.00097 18.8 0.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.9 gi|284167491|ref|YP_003405769.1| - 0.00081 18.8 0.0 0.0017 17.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_29 PF03141.11 gi|284167491|ref|YP_003405769.1| - 0.13 10.5 0.0 0.15 10.3 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Gp37_Gp68 PF07505.6 gi|284167491|ref|YP_003405769.1| - 0.13 11.3 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Phage protein Gp37/Gp68 ADH_zinc_N PF00107.21 gi|284167491|ref|YP_003405769.1| - 0.14 11.7 0.1 0.24 10.9 0.0 1.4 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Cu-oxidase_3 PF07732.10 gi|284167492|ref|YP_003405770.1| - 3.4e-44 149.3 0.0 9.2e-33 112.4 0.0 3.2 3 0 0 3 3 3 3 Multicopper oxidase Cu-oxidase_2 PF07731.9 gi|284167492|ref|YP_003405770.1| - 3.8e-34 117.1 3.4 1.1e-22 80.0 1.8 5.2 3 2 0 3 3 3 3 Multicopper oxidase Cu-oxidase PF00394.17 gi|284167492|ref|YP_003405770.1| - 7e-23 81.2 0.0 5.6e-22 78.3 0.0 2.3 3 0 0 3 3 3 1 Multicopper oxidase Cupredoxin_1 PF13473.1 gi|284167492|ref|YP_003405770.1| - 0.00016 21.4 0.0 0.4 10.5 0.0 2.8 3 0 0 3 3 3 2 Cupredoxin-like domain DUF326 PF03860.11 gi|284167493|ref|YP_003405771.1| - 1.3e-06 27.8 44.7 0.014 15.1 5.5 5.0 4 1 0 4 4 4 4 Domain of Unknown Function (DUF326) Thioredoxin_4 PF13462.1 gi|284167494|ref|YP_003405772.1| - 1.4e-24 86.9 0.0 1.7e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|284167494|ref|YP_003405772.1| - 6.6e-13 48.6 0.2 4.5e-07 29.6 0.0 2.2 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.1 gi|284167494|ref|YP_003405772.1| - 2.5e-12 46.9 0.0 6.5e-12 45.6 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_5 PF13743.1 gi|284167494|ref|YP_003405772.1| - 2.4e-05 23.9 0.0 7e-05 22.4 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin Thioredoxin PF00085.15 gi|284167494|ref|YP_003405772.1| - 0.02 14.5 0.0 0.039 13.6 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin TAT_signal PF10518.4 gi|284167494|ref|YP_003405772.1| - 0.17 11.9 1.0 0.55 10.3 0.7 1.9 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Polysacc_deac_1 PF01522.16 gi|284167495|ref|YP_003405773.1| - 0.0006 19.4 0.0 0.00097 18.7 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Response_reg PF00072.19 gi|284167498|ref|YP_003405776.1| - 1e-06 28.7 0.0 1.1e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain HTH_20 PF12840.2 gi|284167499|ref|YP_003405777.1| - 1.7e-09 37.3 0.4 2.9e-09 36.5 0.1 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|284167499|ref|YP_003405777.1| - 1.9e-06 27.1 0.0 3.1e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|284167499|ref|YP_003405777.1| - 0.00025 20.5 0.1 0.00043 19.7 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_IclR PF09339.5 gi|284167499|ref|YP_003405777.1| - 0.00035 20.1 0.1 0.00058 19.3 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|284167499|ref|YP_003405777.1| - 0.00058 19.4 0.3 0.00092 18.8 0.2 1.3 1 0 0 1 1 1 1 MarR family FUR PF01475.14 gi|284167499|ref|YP_003405777.1| - 0.00081 19.3 0.1 0.0011 18.9 0.1 1.2 1 0 0 1 1 1 1 Ferric uptake regulator family TrmB PF01978.14 gi|284167499|ref|YP_003405777.1| - 0.0014 18.2 0.0 0.0025 17.5 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|284167499|ref|YP_003405777.1| - 0.0015 18.7 0.1 0.0026 18.0 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|284167499|ref|YP_003405777.1| - 0.0017 17.9 0.1 0.0034 17.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain PadR PF03551.9 gi|284167499|ref|YP_003405777.1| - 0.013 15.2 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Phage_rep_org_N PF09681.5 gi|284167499|ref|YP_003405777.1| - 0.029 13.9 0.0 0.041 13.4 0.0 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_23 PF13384.1 gi|284167499|ref|YP_003405777.1| - 0.11 12.1 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Corona_NS3b PF03053.9 gi|284167500|ref|YP_003405778.1| - 0.003 17.1 0.2 0.004 16.7 0.1 1.3 1 1 0 1 1 1 1 ORF3b coronavirus protein 7TMR-DISM_7TM PF07695.6 gi|284167500|ref|YP_003405778.1| - 0.06 13.0 8.1 0.066 12.8 5.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF3353 PF11833.3 gi|284167500|ref|YP_003405778.1| - 1.3 8.4 5.4 1.5 8.2 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3353) DUF4229 PF14012.1 gi|284167500|ref|YP_003405778.1| - 2.9 7.8 6.1 2 8.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Redoxin PF08534.5 gi|284167501|ref|YP_003405779.1| - 0.053 13.0 0.0 0.067 12.7 0.0 1.1 1 0 0 1 1 1 0 Redoxin Thioredoxin PF00085.15 gi|284167502|ref|YP_003405780.1| - 3.4e-13 49.1 0.0 4e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|284167502|ref|YP_003405780.1| - 2.9e-06 27.4 0.0 0.0017 18.4 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like domain TraF PF13728.1 gi|284167502|ref|YP_003405780.1| - 0.00029 20.4 0.0 0.001 18.6 0.0 1.8 1 1 0 1 1 1 1 F plasmid transfer operon protein TrbC_Ftype PF09673.5 gi|284167502|ref|YP_003405780.1| - 0.00073 19.1 0.0 0.00083 18.9 0.0 1.1 1 0 0 1 1 1 1 Type-F conjugative transfer system pilin assembly protein Thioredoxin_3 PF13192.1 gi|284167502|ref|YP_003405780.1| - 0.002 17.9 0.0 0.003 17.3 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain HyaE PF07449.6 gi|284167502|ref|YP_003405780.1| - 0.0027 17.5 0.0 0.0043 16.9 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_8 PF13905.1 gi|284167502|ref|YP_003405780.1| - 0.059 13.4 0.0 4.1 7.6 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin-like DUF836 PF05768.9 gi|284167502|ref|YP_003405780.1| - 0.078 13.2 0.0 0.14 12.4 0.0 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) CmcH_NodU PF02543.10 gi|284167503|ref|YP_003405781.1| - 8e-92 308.1 0.0 9.9e-92 307.8 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase Peptidase_M22 PF00814.20 gi|284167503|ref|YP_003405781.1| - 0.0025 17.3 0.0 0.0047 16.4 0.0 1.4 1 0 0 1 1 1 1 Glycoprotease family Zip PF02535.17 gi|284167504|ref|YP_003405782.1| - 1.3e-20 73.6 5.8 1.3e-20 73.6 4.0 2.5 1 1 0 2 2 2 2 ZIP Zinc transporter Lactamase_B PF00753.22 gi|284167505|ref|YP_003405783.1| - 3.9e-26 91.9 7.6 6e-26 91.2 5.3 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.15 gi|284167505|ref|YP_003405783.1| - 5.4e-15 55.7 0.0 9.4e-14 51.7 0.0 2.3 2 0 0 2 2 2 1 Rhodanese-like domain Lactamase_B_2 PF12706.2 gi|284167505|ref|YP_003405783.1| - 0.0053 16.3 0.0 0.0094 15.5 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|284167505|ref|YP_003405783.1| - 0.054 13.1 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Cu-oxidase_2 PF07731.9 gi|284167506|ref|YP_003405784.1| - 3.5e-20 71.9 1.1 3.5e-20 71.9 0.7 2.2 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_3 PF07732.10 gi|284167506|ref|YP_003405784.1| - 5.6e-16 58.3 0.7 4.1e-06 26.5 0.0 3.5 3 0 0 3 3 3 3 Multicopper oxidase Cu-oxidase PF00394.17 gi|284167506|ref|YP_003405784.1| - 0.051 13.4 0.0 0.71 9.7 0.0 2.5 2 1 0 2 2 2 0 Multicopper oxidase TrmB PF01978.14 gi|284167507|ref|YP_003405785.1| - 1.6e-15 56.5 0.0 2.1e-15 56.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.11 gi|284167507|ref|YP_003405785.1| - 1.2e-05 25.3 0.0 1.5e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.5 gi|284167507|ref|YP_003405785.1| - 8.9e-05 21.9 0.0 0.00018 21.0 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.7 gi|284167507|ref|YP_003405785.1| - 0.00042 19.9 0.0 0.00073 19.1 0.0 1.4 1 0 0 1 1 1 1 HTH domain MarR PF01047.17 gi|284167507|ref|YP_003405785.1| - 0.00067 19.3 0.0 0.0018 17.9 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|284167507|ref|YP_003405785.1| - 0.0024 18.1 0.1 0.0045 17.2 0.0 1.6 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|284167507|ref|YP_003405785.1| - 0.0041 16.8 0.0 0.0073 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|284167507|ref|YP_003405785.1| - 0.0072 15.8 0.0 0.014 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|284167507|ref|YP_003405785.1| - 0.0078 15.8 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|284167507|ref|YP_003405785.1| - 0.011 15.1 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RuvB_C PF05491.8 gi|284167507|ref|YP_003405785.1| - 0.011 15.3 0.0 0.021 14.4 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB C-terminus 2OG-Fe_Oxy_2 PF10014.4 gi|284167507|ref|YP_003405785.1| - 0.021 14.2 0.1 0.027 13.8 0.1 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase UMPH-1 PF05822.7 gi|284167507|ref|YP_003405785.1| - 0.027 13.8 0.1 0.032 13.5 0.1 1.3 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) DUF387 PF04079.11 gi|284167507|ref|YP_003405785.1| - 0.028 13.8 0.1 5.4 6.3 0.0 2.4 1 1 2 3 3 3 0 Putative transcriptional regulators (Ypuh-like) HTH_23 PF13384.1 gi|284167507|ref|YP_003405785.1| - 0.086 12.5 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.1 gi|284167507|ref|YP_003405785.1| - 0.11 12.6 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Rio2_N PF09202.6 gi|284167507|ref|YP_003405785.1| - 0.16 12.0 0.4 0.8 9.8 0.3 2.0 1 1 0 1 1 1 0 Rio2, N-terminal TauE PF01925.14 gi|284167508|ref|YP_003405786.1| - 3e-35 121.8 29.3 3e-35 121.8 20.3 2.0 1 1 1 2 2 2 1 Sulfite exporter TauE/SafE UPF0016 PF01169.14 gi|284167509|ref|YP_003405787.1| - 0.017 15.2 1.2 0.019 15.1 0.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0016 Usp PF00582.21 gi|284167510|ref|YP_003405788.1| - 3.5e-44 150.4 2.5 2.5e-26 92.5 0.1 2.1 2 0 0 2 2 2 2 Universal stress protein family TPR_16 PF13432.1 gi|284167510|ref|YP_003405788.1| - 0.014 16.0 0.2 0.3 11.7 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat HTH_10 PF04967.7 gi|284167511|ref|YP_003405789.1| - 1.4e-18 66.1 0.0 2.4e-18 65.4 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain LacI PF00356.16 gi|284167511|ref|YP_003405789.1| - 0.0053 16.3 0.2 0.019 14.5 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Sigma70_r4 PF04545.11 gi|284167511|ref|YP_003405789.1| - 0.011 15.0 0.0 0.022 14.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.1 gi|284167511|ref|YP_003405789.1| - 0.017 14.7 0.0 0.034 13.8 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain MarR_2 PF12802.2 gi|284167511|ref|YP_003405789.1| - 0.021 14.4 0.0 0.041 13.5 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.5 gi|284167511|ref|YP_003405789.1| - 0.047 13.2 0.0 0.096 12.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain SpoIIID PF12116.3 gi|284167511|ref|YP_003405789.1| - 0.084 12.8 0.0 0.26 11.2 0.0 1.7 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_20 PF12840.2 gi|284167511|ref|YP_003405789.1| - 0.11 12.2 0.0 0.33 10.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Copper-bind PF00127.15 gi|284167513|ref|YP_003405791.1| - 2.9e-10 40.2 0.1 5e-10 39.4 0.1 1.4 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TAT_signal PF10518.4 gi|284167513|ref|YP_003405791.1| - 0.098 12.7 0.9 0.19 11.8 0.6 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Ion_trans_2 PF07885.11 gi|284167514|ref|YP_003405792.1| - 8.2e-09 35.0 6.0 8.2e-09 35.0 4.1 2.3 2 1 0 2 2 2 1 Ion channel SHOCT PF09851.4 gi|284167515|ref|YP_003405793.1| - 1.8e-08 33.5 2.7 2.4e-08 33.1 1.9 1.2 1 0 0 1 1 1 1 Short C-terminal domain DUF1707 PF08044.6 gi|284167515|ref|YP_003405793.1| - 9.7e-05 22.0 2.8 0.00013 21.6 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) Virul_fac_BrkB PF03631.10 gi|284167515|ref|YP_003405793.1| - 0.053 12.8 3.4 0.065 12.5 2.3 1.1 1 0 0 1 1 1 0 Virulence factor BrkB GvpG PF05120.7 gi|284167515|ref|YP_003405793.1| - 0.077 12.8 0.3 0.13 12.1 0.2 1.3 1 0 0 1 1 1 0 Gas vesicle protein G ABC2_membrane_4 PF12730.2 gi|284167515|ref|YP_003405793.1| - 0.16 11.1 7.4 0.19 10.8 5.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein TMEMspv1-c74-12 PF11044.3 gi|284167515|ref|YP_003405793.1| - 0.22 11.1 0.7 0.37 10.3 0.0 1.6 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF1469 PF07332.6 gi|284167515|ref|YP_003405793.1| - 0.33 10.6 4.8 0.52 10.0 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) Tic20 PF09685.5 gi|284167515|ref|YP_003405793.1| - 3.4 7.6 7.2 6.1 6.8 5.0 1.4 1 1 0 1 1 1 0 Tic20-like protein Tad PF13400.1 gi|284167515|ref|YP_003405793.1| - 5.2 7.1 13.0 6.1 6.9 0.5 2.4 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Nitroreductase PF00881.19 gi|284167516|ref|YP_003405794.1| - 2.3e-12 47.0 0.5 0.007 16.1 0.1 3.3 2 1 1 3 3 3 3 Nitroreductase family Spore_YtfJ PF09579.5 gi|284167517|ref|YP_003405795.1| - 6.5e-14 51.5 0.5 8.6e-14 51.1 0.4 1.2 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) Abi PF02517.11 gi|284167518|ref|YP_003405796.1| - 1.1e-12 47.8 9.8 1.1e-12 47.8 6.8 3.0 3 1 0 3 3 3 1 CAAX protease self-immunity ABC2_membrane_4 PF12730.2 gi|284167518|ref|YP_003405796.1| - 8 5.5 36.2 9.4e+02 -1.3 24.8 2.9 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF998 PF06197.8 gi|284167519|ref|YP_003405797.1| - 0.0095 15.2 0.3 0.01 15.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Beta-lactamase PF00144.19 gi|284167520|ref|YP_003405798.1| - 1.8e-64 217.8 0.7 2.7e-64 217.2 0.5 1.2 1 0 0 1 1 1 1 Beta-lactamase Beta-lactamase2 PF13354.1 gi|284167520|ref|YP_003405798.1| - 0.026 13.9 0.0 0.61 9.5 0.0 2.1 1 1 0 1 1 1 0 Beta-lactamase enzyme family DUF4231 PF14015.1 gi|284167520|ref|YP_003405798.1| - 6.2 6.8 9.4 4.7 7.2 1.9 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) 2-oxoacid_dh PF00198.18 gi|284167521|ref|YP_003405799.1| - 3.4e-27 95.2 0.0 1.5e-14 53.8 0.0 2.0 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CAT PF00302.13 gi|284167521|ref|YP_003405799.1| - 0.06 12.9 0.0 9.4 5.7 0.0 2.1 2 0 0 2 2 2 0 Chloramphenicol acetyltransferase DUF4350 PF14258.1 gi|284167522|ref|YP_003405800.1| - 0.04 14.1 0.1 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) DUF393 PF04134.7 gi|284167523|ref|YP_003405801.1| - 7.2e-15 56.0 0.0 8.1e-15 55.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF393 TrkA_N PF02254.13 gi|284167524|ref|YP_003405802.1| - 9.9e-42 141.6 8.9 3.4e-21 75.4 0.9 3.2 3 0 0 3 3 3 2 TrkA-N domain TrkA_C PF02080.16 gi|284167524|ref|YP_003405802.1| - 1.6e-21 75.6 2.5 6.5e-10 38.4 0.1 2.8 2 0 0 2 2 2 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|284167524|ref|YP_003405802.1| - 9.4e-05 22.6 0.8 0.00032 20.9 0.1 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.14 gi|284167524|ref|YP_003405802.1| - 0.00053 19.1 0.0 0.0011 18.1 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|284167524|ref|YP_003405802.1| - 0.0015 18.6 0.1 0.0039 17.2 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_10 PF13460.1 gi|284167524|ref|YP_003405802.1| - 0.0018 18.2 1.6 0.0043 17.0 0.6 2.0 2 0 0 2 2 2 1 NADH(P)-binding Ion_trans_2 PF07885.11 gi|284167524|ref|YP_003405802.1| - 0.0037 16.9 3.7 0.011 15.4 2.5 1.7 1 1 0 1 1 1 1 Ion channel XdhC_C PF13478.1 gi|284167524|ref|YP_003405802.1| - 0.0075 16.5 0.4 0.022 15.0 0.1 2.1 2 1 0 2 2 2 1 XdhC Rossmann domain AlaDh_PNT_C PF01262.16 gi|284167524|ref|YP_003405802.1| - 0.019 14.5 0.1 0.04 13.4 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.12 gi|284167524|ref|YP_003405802.1| - 0.081 12.0 1.3 0.8 8.7 0.1 2.4 2 0 0 2 2 2 0 Thi4 family ThiF PF00899.16 gi|284167524|ref|YP_003405802.1| - 0.13 12.0 2.8 0.88 9.3 0.0 3.0 3 1 1 4 4 4 0 ThiF family UCR_UQCRX_QCR9 PF05365.7 gi|284167524|ref|YP_003405802.1| - 0.2 11.3 0.5 0.42 10.2 0.4 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PHO4 PF01384.15 gi|284167525|ref|YP_003405803.1| - 3.2e-38 131.2 35.9 3.2e-38 131.2 24.9 2.0 1 1 1 2 2 2 1 Phosphate transporter family Sulf_transp PF04143.9 gi|284167526|ref|YP_003405804.1| - 5.9e-10 39.0 10.3 5.9e-10 39.0 7.1 2.9 3 0 0 3 3 3 2 Sulphur transport DUF204 PF02659.10 gi|284167526|ref|YP_003405804.1| - 1.2 9.3 11.2 0.06 13.4 2.1 2.6 1 1 1 2 2 2 0 Domain of unknown function DUF DUF2207 PF09972.4 gi|284167526|ref|YP_003405804.1| - 1.3 7.4 4.0 0.36 9.3 0.1 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4341 PF14241.1 gi|284167527|ref|YP_003405805.1| - 9.2e-17 60.5 8.0 9.2e-16 57.2 2.7 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4341) Sulf_transp PF04143.9 gi|284167527|ref|YP_003405805.1| - 1.1e-10 41.3 7.0 1.1e-10 41.3 4.9 2.9 3 1 0 3 3 3 2 Sulphur transport Lactamase_B PF00753.22 gi|284167528|ref|YP_003405806.1| - 6.7e-17 61.7 4.8 1.1e-16 61.0 3.3 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.15 gi|284167528|ref|YP_003405806.1| - 2.9e-11 43.6 0.0 5.5e-11 42.8 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Toxin_61 PF15538.1 gi|284167528|ref|YP_003405806.1| - 0.023 14.6 0.0 0.053 13.5 0.0 1.5 2 0 0 2 2 2 0 Putative toxin 61 Lactamase_B_2 PF12706.2 gi|284167528|ref|YP_003405806.1| - 0.029 13.8 0.3 0.079 12.4 0.2 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain TusA PF01206.12 gi|284167529|ref|YP_003405807.1| - 1.2e-21 76.1 0.0 1.3e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|284167529|ref|YP_003405807.1| - 0.0024 17.3 0.0 0.0047 16.4 0.0 1.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2249) DrsE_2 PF13686.1 gi|284167530|ref|YP_003405808.1| - 2.4e-53 179.8 0.6 3.3e-53 179.4 0.4 1.2 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.10 gi|284167530|ref|YP_003405808.1| - 2.5e-05 24.3 0.1 0.0003 20.8 0.1 2.2 1 1 0 1 1 1 1 DsrE/DsrF-like family Thioredoxin PF00085.15 gi|284167531|ref|YP_003405809.1| - 2.4e-29 101.0 0.0 2.6e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|284167531|ref|YP_003405809.1| - 1e-12 48.2 0.0 1.1e-11 44.8 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.1 gi|284167531|ref|YP_003405809.1| - 2.7e-07 30.5 0.1 5.4e-07 29.5 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.1 gi|284167531|ref|YP_003405809.1| - 3e-07 30.4 0.0 0.00048 20.1 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like DSBA PF01323.15 gi|284167531|ref|YP_003405809.1| - 1.8e-05 24.4 0.2 4.8e-05 22.9 0.0 1.7 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_9 PF14595.1 gi|284167531|ref|YP_003405809.1| - 5.1e-05 22.8 0.0 5.9e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.1 gi|284167531|ref|YP_003405809.1| - 9.2e-05 22.1 0.0 0.00017 21.3 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin domain AhpC-TSA PF00578.16 gi|284167531|ref|YP_003405809.1| - 0.00054 19.6 0.0 0.001 18.7 0.0 1.4 1 1 0 1 1 1 1 AhpC/TSA family TraF PF13728.1 gi|284167531|ref|YP_003405809.1| - 0.00086 18.8 0.0 0.001 18.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein HyaE PF07449.6 gi|284167531|ref|YP_003405809.1| - 0.0033 17.2 0.0 0.0053 16.6 0.0 1.3 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE DUF836 PF05768.9 gi|284167531|ref|YP_003405809.1| - 0.0036 17.5 0.0 0.006 16.8 0.0 1.5 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.19 gi|284167531|ref|YP_003405809.1| - 0.0052 16.7 0.0 0.0079 16.1 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Redoxin PF08534.5 gi|284167531|ref|YP_003405809.1| - 0.019 14.4 0.1 0.077 12.5 0.0 1.8 1 1 0 1 1 1 0 Redoxin Lipase_GDSL_2 PF13472.1 gi|284167531|ref|YP_003405809.1| - 0.02 15.0 0.1 4.5 7.3 0.0 2.1 1 1 1 2 2 2 0 GDSL-like Lipase/Acylhydrolase family Thioredoxin_4 PF13462.1 gi|284167531|ref|YP_003405809.1| - 0.04 13.9 0.0 0.085 12.8 0.0 1.5 1 1 1 2 2 2 0 Thioredoxin DIM1 PF02966.11 gi|284167531|ref|YP_003405809.1| - 0.08 12.4 0.0 0.083 12.3 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_5 PF13743.1 gi|284167531|ref|YP_003405809.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 1 1 2 2 2 0 Thioredoxin Spore_YabQ PF09578.5 gi|284167532|ref|YP_003405810.1| - 0.01 15.7 3.7 0.01 15.7 2.5 3.1 2 1 0 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) Flavodoxin_5 PF12724.2 gi|284167535|ref|YP_003405813.1| - 3.9e-40 137.1 0.0 4.8e-40 136.8 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|284167535|ref|YP_003405813.1| - 2.8e-06 27.3 1.0 5.6e-06 26.4 0.6 1.7 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|284167535|ref|YP_003405813.1| - 0.00017 21.0 0.0 0.00029 20.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain PTS_IIB PF02302.12 gi|284167535|ref|YP_003405813.1| - 0.0019 18.6 0.3 0.0034 17.8 0.2 1.4 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit FMN_red PF03358.10 gi|284167535|ref|YP_003405813.1| - 0.0033 16.9 0.1 0.012 15.0 0.1 1.9 1 1 1 2 2 2 1 NADPH-dependent FMN reductase B12-binding PF02310.14 gi|284167535|ref|YP_003405813.1| - 0.015 15.2 0.1 0.06 13.2 0.1 1.9 2 1 0 2 2 2 0 B12 binding domain Flavodoxin_4 PF12682.2 gi|284167535|ref|YP_003405813.1| - 0.016 14.5 0.0 5.6 6.3 0.0 2.6 2 1 1 3 3 3 0 Flavodoxin DUF3489 PF11994.3 gi|284167535|ref|YP_003405813.1| - 0.093 12.6 0.0 0.23 11.4 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3489) LRV_FeS PF05484.6 gi|284167536|ref|YP_003405814.1| - 0.1 12.2 1.0 0.28 10.8 0.0 2.1 2 1 0 2 2 2 0 LRV protein FeS4 cluster DUF308 PF03729.8 gi|284167537|ref|YP_003405815.1| - 2.3e-15 56.3 35.3 1.3e-08 34.7 10.3 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) DUF883 PF05957.8 gi|284167537|ref|YP_003405815.1| - 0.11 12.8 0.7 0.11 12.8 0.5 2.6 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF883) DUF4538 PF15061.1 gi|284167537|ref|YP_003405815.1| - 1.3 8.3 3.2 3.2 7.1 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Methyltransf_11 PF08241.7 gi|284167538|ref|YP_003405816.1| - 1.8e-19 70.0 0.1 3e-19 69.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|284167538|ref|YP_003405816.1| - 1.9e-11 43.7 0.0 2.5e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167538|ref|YP_003405816.1| - 2.6e-11 44.0 0.0 4.8e-11 43.2 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|284167538|ref|YP_003405816.1| - 2.3e-10 40.4 0.0 4.9e-10 39.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|284167538|ref|YP_003405816.1| - 1.2e-09 38.4 0.0 1.9e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|284167538|ref|YP_003405816.1| - 2.4e-08 33.3 0.0 3.8e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|284167538|ref|YP_003405816.1| - 3.3e-08 33.5 0.2 6.2e-08 32.6 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|284167538|ref|YP_003405816.1| - 4.9e-07 30.1 0.0 7.4e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|284167538|ref|YP_003405816.1| - 1.5e-05 24.2 0.0 2e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DREV PF05219.7 gi|284167538|ref|YP_003405816.1| - 6.5e-05 21.9 0.0 9.3e-05 21.4 0.0 1.1 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_8 PF05148.10 gi|284167538|ref|YP_003405816.1| - 7.7e-05 22.4 0.0 0.00019 21.1 0.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.9 gi|284167538|ref|YP_003405816.1| - 0.00057 19.3 0.0 0.001 18.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.14 gi|284167538|ref|YP_003405816.1| - 0.0037 17.2 0.0 0.005 16.8 0.0 1.3 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_29 PF03141.11 gi|284167538|ref|YP_003405816.1| - 0.11 10.8 0.0 0.13 10.6 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Gp37_Gp68 PF07505.6 gi|284167538|ref|YP_003405816.1| - 0.11 11.5 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Phage protein Gp37/Gp68 PAS_4 PF08448.5 gi|284167539|ref|YP_003405817.1| - 1.8e-28 98.7 2.1 6.1e-17 61.6 0.1 2.9 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.21 gi|284167539|ref|YP_003405817.1| - 2.5e-28 97.9 0.0 5.1e-28 96.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|284167539|ref|YP_003405817.1| - 3.7e-21 75.4 0.4 2.2e-11 44.0 0.0 2.8 3 0 0 3 3 2 2 PAS domain PAS_3 PF08447.6 gi|284167539|ref|YP_003405817.1| - 7.5e-16 58.0 2.5 3.1e-12 46.4 0.1 2.7 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|284167539|ref|YP_003405817.1| - 4.3e-11 42.6 0.2 1.3e-06 28.1 0.0 2.6 2 0 0 2 2 2 2 PAS fold GAF_2 PF13185.1 gi|284167539|ref|YP_003405817.1| - 5.9e-11 43.0 0.2 1.7e-10 41.6 0.1 1.9 2 0 0 2 2 2 1 GAF domain HisKA PF00512.20 gi|284167539|ref|YP_003405817.1| - 8.7e-10 38.4 0.2 8.7e-10 38.4 0.1 2.5 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.1 gi|284167539|ref|YP_003405817.1| - 2.6e-07 30.2 0.0 3.9e-06 26.5 0.0 2.7 2 0 0 2 2 2 1 PAS domain GAF PF01590.21 gi|284167539|ref|YP_003405817.1| - 7e-07 29.4 0.1 9.4e-06 25.8 0.0 2.4 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.1 gi|284167539|ref|YP_003405817.1| - 1.6e-05 24.9 0.5 5.9e-05 23.1 0.0 2.2 3 0 0 3 3 3 1 GAF domain HATPase_c_5 PF14501.1 gi|284167539|ref|YP_003405817.1| - 2.1e-05 24.1 0.0 5.1e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.1 gi|284167539|ref|YP_003405817.1| - 0.0038 16.8 0.0 0.0094 15.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|284167539|ref|YP_003405817.1| - 0.026 14.7 0.1 5.8 7.2 0.0 2.9 3 0 0 3 3 3 0 PAS domain dCMP_cyt_deam_1 PF00383.17 gi|284167540|ref|YP_003405818.1| - 2.5e-13 49.5 0.0 3.2e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region XOO_2897-deam PF14440.1 gi|284167540|ref|YP_003405818.1| - 0.008 15.8 0.0 0.0096 15.6 0.0 1.2 1 0 0 1 1 1 1 Xanthomonas XOO_2897-like deaminase Bd3614-deam PF14439.1 gi|284167540|ref|YP_003405818.1| - 0.067 13.0 0.3 0.18 11.6 0.1 1.6 1 1 1 2 2 2 0 Bd3614-like deaminase APOBEC_N PF08210.6 gi|284167540|ref|YP_003405818.1| - 0.074 12.6 0.0 0.087 12.4 0.0 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain Lipase_GDSL_2 PF13472.1 gi|284167541|ref|YP_003405819.1| - 4.7e-06 26.8 0.7 1e-05 25.7 0.5 1.6 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family FBPase_glpX PF03320.8 gi|284167541|ref|YP_003405819.1| - 0.06 11.9 0.0 0.083 11.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Lipase_GDSL PF00657.17 gi|284167541|ref|YP_003405819.1| - 0.088 12.6 0.2 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase OrfB_IS605 PF01385.14 gi|284167542|ref|YP_003405820.1| - 1e-35 123.2 0.0 2.9e-35 121.7 0.0 1.7 1 1 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|284167542|ref|YP_003405820.1| - 1.7e-16 59.6 2.0 3.3e-16 58.6 1.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|284167542|ref|YP_003405820.1| - 0.00024 20.8 0.3 0.00069 19.3 0.2 1.8 1 0 0 1 1 1 1 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|284167542|ref|YP_003405820.1| - 0.02 14.2 2.3 0.051 12.9 0.9 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-NADH-PPase PF09297.6 gi|284167542|ref|YP_003405820.1| - 0.024 14.1 0.6 0.052 13.0 0.4 1.6 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Complex1_30kDa PF00329.14 gi|284167542|ref|YP_003405820.1| - 0.061 13.5 0.1 0.58 10.4 0.0 2.3 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FlhC PF05280.6 gi|284167542|ref|YP_003405820.1| - 0.17 11.3 1.6 2.2 7.7 0.0 2.3 1 1 1 2 2 2 0 Flagellar transcriptional activator (FlhC) Usp PF00582.21 gi|284167543|ref|YP_003405821.1| - 1.7e-22 80.1 2.4 1.9e-22 79.9 1.7 1.0 1 0 0 1 1 1 1 Universal stress protein family AAA_12 PF13087.1 gi|284167544|ref|YP_003405822.1| - 7.1e-47 159.3 0.0 1.7e-45 154.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.1 gi|284167544|ref|YP_003405822.1| - 2e-32 112.6 0.3 1.9e-15 57.0 0.1 2.3 1 1 1 2 2 2 2 AAA domain AAA_30 PF13604.1 gi|284167544|ref|YP_003405822.1| - 5.1e-15 55.5 1.3 1.4e-14 54.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|284167544|ref|YP_003405822.1| - 1.4e-11 44.0 6.0 3.1e-11 42.8 0.2 3.0 3 0 0 3 3 3 1 Part of AAA domain Viral_helicase1 PF01443.13 gi|284167544|ref|YP_003405822.1| - 3.1e-07 30.1 0.2 0.0014 18.1 0.0 3.0 1 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.4 gi|284167544|ref|YP_003405822.1| - 0.00055 19.0 0.0 0.0016 17.4 0.0 1.8 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|284167544|ref|YP_003405822.1| - 0.0017 18.5 0.1 0.0065 16.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|284167544|ref|YP_003405822.1| - 0.0018 18.2 0.3 0.0071 16.3 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain ResIII PF04851.10 gi|284167544|ref|YP_003405822.1| - 0.0046 16.8 0.0 0.016 15.0 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA PF00004.24 gi|284167544|ref|YP_003405822.1| - 0.022 14.9 0.7 0.15 12.2 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) UvrD-helicase PF00580.16 gi|284167544|ref|YP_003405822.1| - 0.025 13.8 0.0 0.05 12.8 0.0 1.5 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_17 PF13207.1 gi|284167544|ref|YP_003405822.1| - 0.028 15.2 0.8 0.29 11.9 0.0 3.0 3 1 0 3 3 3 0 AAA domain UvrD_C_2 PF13538.1 gi|284167544|ref|YP_003405822.1| - 0.033 14.3 0.0 0.086 12.9 0.0 1.8 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain PhoH PF02562.11 gi|284167544|ref|YP_003405822.1| - 0.06 12.5 0.0 2.2 7.4 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein PIF1 PF05970.9 gi|284167544|ref|YP_003405822.1| - 0.15 10.9 0.0 2 7.2 0.0 2.1 2 0 0 2 2 2 0 PIF1-like helicase Mg_chelatase PF01078.16 gi|284167544|ref|YP_003405822.1| - 0.15 11.2 0.0 0.32 10.1 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TrwB_AAD_bind PF10412.4 gi|284167544|ref|YP_003405822.1| - 0.17 10.4 0.0 0.28 9.7 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Arch_ATPase PF01637.13 gi|284167544|ref|YP_003405822.1| - 0.18 11.5 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Archaeal ATPase DAP3 PF10236.4 gi|284167544|ref|YP_003405822.1| - 0.31 9.9 0.0 0.73 8.7 0.0 1.6 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Copper-bind PF00127.15 gi|284167545|ref|YP_003405823.1| - 0.00038 20.6 0.0 0.00072 19.7 0.0 1.5 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TAT_signal PF10518.4 gi|284167545|ref|YP_003405823.1| - 0.0081 16.0 3.6 0.019 14.8 2.5 1.7 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence GRP PF07172.6 gi|284167545|ref|YP_003405823.1| - 0.1 13.0 26.3 0.95 9.9 5.4 2.3 2 0 0 2 2 2 0 Glycine rich protein family DUF3989 PF13150.1 gi|284167546|ref|YP_003405824.1| - 0.027 13.9 0.1 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) DUF1189 PF06691.6 gi|284167546|ref|YP_003405824.1| - 0.037 13.3 0.0 0.043 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) DUF1517 PF07466.6 gi|284167546|ref|YP_003405824.1| - 0.056 12.4 0.7 0.067 12.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1517) ISK_Channel PF02060.10 gi|284167546|ref|YP_003405824.1| - 0.1 12.1 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Slow voltage-gated potassium channel zf-ribbon_3 PF13248.1 gi|284167547|ref|YP_003405825.1| - 3.2e-06 26.1 1.1 5.1e-06 25.5 0.8 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|284167547|ref|YP_003405825.1| - 8.2e-05 21.9 2.0 0.00013 21.2 1.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|284167547|ref|YP_003405825.1| - 0.00012 21.7 0.3 0.00017 21.2 0.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-RING_3 PF14369.1 gi|284167547|ref|YP_003405825.1| - 0.00012 21.9 1.9 0.18 11.7 0.1 2.3 2 0 0 2 2 2 2 zinc-finger TM2 PF05154.11 gi|284167547|ref|YP_003405825.1| - 0.00018 21.6 0.3 0.00031 20.9 0.2 1.3 1 0 0 1 1 1 1 TM2 domain DUF981 PF06168.6 gi|284167547|ref|YP_003405825.1| - 0.0056 16.4 0.7 0.0073 16.1 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF981) LpxB PF02684.10 gi|284167547|ref|YP_003405825.1| - 0.047 12.3 0.1 0.059 11.9 0.1 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase DUF2301 PF10063.4 gi|284167547|ref|YP_003405825.1| - 0.094 12.9 0.4 0.13 12.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized integral membrane protein (DUF2301) DUF2628 PF10947.3 gi|284167547|ref|YP_003405825.1| - 0.11 12.2 6.5 0.17 11.6 4.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) TerY-C PF15616.1 gi|284167547|ref|YP_003405825.1| - 0.14 12.0 1.4 0.72 9.7 1.0 1.9 1 1 0 1 1 1 0 TerY-C metal binding domain DUF454 PF04304.8 gi|284167547|ref|YP_003405825.1| - 1.4 8.9 6.3 4.3 7.4 0.4 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF454) DUF3017 PF11222.3 gi|284167547|ref|YP_003405825.1| - 5.6 6.8 9.3 1.2 8.9 4.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3017) SNARE_assoc PF09335.6 gi|284167548|ref|YP_003405826.1| - 3.4e-14 53.1 6.5 8e-14 51.9 4.5 1.7 1 1 0 1 1 1 1 SNARE associated Golgi protein TetR_C_6 PF13977.1 gi|284167549|ref|YP_003405827.1| - 3.9e-11 42.9 0.2 5.6e-11 42.4 0.2 1.2 1 0 0 1 1 1 1 Bacterial transcriptional repressor TetR_N PF00440.18 gi|284167549|ref|YP_003405827.1| - 2.2e-08 33.6 0.0 3.9e-08 32.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Phage_connect_1 PF05135.8 gi|284167549|ref|YP_003405827.1| - 0.047 13.8 0.4 1.8 8.8 0.1 2.6 1 1 0 2 2 2 0 Phage gp6-like head-tail connector protein MMPL PF03176.10 gi|284167550|ref|YP_003405828.1| - 8.8e-39 133.1 42.0 9.1e-23 80.4 7.9 3.5 3 1 0 3 3 3 2 MMPL family Sterol-sensing PF12349.3 gi|284167550|ref|YP_003405828.1| - 3.3e-10 39.6 9.8 2.1e-05 24.0 0.6 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.13 gi|284167550|ref|YP_003405828.1| - 3e-06 25.4 14.3 1.8e-05 22.8 3.7 3.4 4 1 1 5 5 5 3 Patched family ACR_tran PF00873.14 gi|284167550|ref|YP_003405828.1| - 1e-05 23.2 18.5 6e-05 20.6 2.8 2.4 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family SecD_SecF PF02355.11 gi|284167550|ref|YP_003405828.1| - 0.00031 20.0 2.9 0.00031 20.0 2.0 2.7 2 0 0 2 2 2 1 Protein export membrane protein EF-hand_5 PF13202.1 gi|284167550|ref|YP_003405828.1| - 0.069 12.5 0.6 0.16 11.3 0.4 1.6 1 0 0 1 1 1 0 EF hand Ferrochelatase PF00762.14 gi|284167551|ref|YP_003405829.1| - 4.4e-68 229.5 0.0 5.4e-68 229.2 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase Glyco_trans_4_4 PF13579.1 gi|284167551|ref|YP_003405829.1| - 1.7e-05 25.0 0.4 0.0015 18.6 0.1 2.3 2 0 0 2 2 2 2 Glycosyl transferase 4-like domain OmpA PF00691.15 gi|284167551|ref|YP_003405829.1| - 0.045 14.1 0.1 2.9 8.3 0.0 2.5 2 0 0 2 2 2 0 OmpA family DUF4056 PF13265.1 gi|284167551|ref|YP_003405829.1| - 0.12 11.3 0.0 0.24 10.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) Amino_oxidase PF01593.19 gi|284167552|ref|YP_003405830.1| - 3e-25 89.1 1.5 1.8e-24 86.6 1.0 2.1 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 gi|284167552|ref|YP_003405830.1| - 1.9e-11 43.8 0.1 5.3e-11 42.3 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|284167552|ref|YP_003405830.1| - 3.8e-06 26.0 0.4 0.003 16.5 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|284167552|ref|YP_003405830.1| - 0.0018 17.4 0.5 0.0027 16.8 0.3 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.1 gi|284167552|ref|YP_003405830.1| - 0.0024 17.6 0.3 2 8.1 0.0 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding Pyr_redox_3 PF13738.1 gi|284167552|ref|YP_003405830.1| - 0.0025 17.8 0.8 0.04 13.9 0.6 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|284167552|ref|YP_003405830.1| - 0.015 14.7 0.2 3.7 6.9 0.0 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.1 gi|284167552|ref|YP_003405830.1| - 0.041 13.8 1.6 3.9 7.4 0.2 2.5 2 0 0 2 2 2 0 NADH(P)-binding F420_oxidored PF03807.12 gi|284167552|ref|YP_003405830.1| - 0.13 12.6 0.6 0.79 10.1 0.1 2.3 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent URO-D PF01208.12 gi|284167553|ref|YP_003405831.1| - 2.1e-103 345.9 0.0 2.3e-103 345.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF457 PF04307.9 gi|284167554|ref|YP_003405832.1| - 1.3e-08 34.3 12.2 2.3e-08 33.5 8.4 1.5 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Usp PF00582.21 gi|284167556|ref|YP_003405834.1| - 1.2e-31 109.7 1.5 1.4e-31 109.5 1.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|284167557|ref|YP_003405835.1| - 3e-30 105.2 2.4 3.4e-30 105.0 1.6 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.13 gi|284167557|ref|YP_003405835.1| - 0.042 13.6 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase AAA_26 PF13500.1 gi|284167557|ref|YP_003405835.1| - 0.05 13.2 0.1 0.059 12.9 0.1 1.3 1 1 0 1 1 1 0 AAA domain DUF1656 PF07869.7 gi|284167558|ref|YP_003405836.1| - 0.028 14.1 1.1 0.092 12.5 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1656) Usp PF00582.21 gi|284167559|ref|YP_003405837.1| - 1.5e-55 187.2 14.6 5e-33 114.2 2.2 2.0 2 0 0 2 2 2 2 Universal stress protein family Usp PF00582.21 gi|284167560|ref|YP_003405838.1| - 8.4e-14 51.9 0.0 1.1e-13 51.5 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Phage_int_SAM_1 PF02899.12 gi|284167561|ref|YP_003405839.1| - 5.3e-05 23.2 0.0 0.00026 21.0 0.0 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.1 gi|284167561|ref|YP_003405839.1| - 0.00017 21.8 0.0 0.00057 20.1 0.0 1.9 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_integrase PF00589.17 gi|284167561|ref|YP_003405839.1| - 0.027 14.1 0.0 0.39 10.3 0.0 2.5 1 1 0 1 1 1 0 Phage integrase family Amidase PF01425.16 gi|284167562|ref|YP_003405840.1| - 2.3e-117 392.5 0.5 2.9e-117 392.2 0.4 1.0 1 0 0 1 1 1 1 Amidase ATP12 PF07542.6 gi|284167562|ref|YP_003405840.1| - 0.17 11.8 0.1 0.31 11.0 0.1 1.3 1 0 0 1 1 1 0 ATP12 chaperone protein Lactamase_B PF00753.22 gi|284167563|ref|YP_003405841.1| - 5.2e-21 75.1 1.6 8.4e-21 74.5 1.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|284167563|ref|YP_003405841.1| - 0.022 14.3 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain EHN PF06441.7 gi|284167564|ref|YP_003405842.1| - 1.4e-38 131.2 0.0 2.6e-38 130.4 0.0 1.5 1 0 0 1 1 1 1 Epoxide hydrolase N terminus Abhydrolase_6 PF12697.2 gi|284167564|ref|YP_003405842.1| - 7e-18 65.3 4.1 7e-18 65.3 2.9 1.8 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|284167564|ref|YP_003405842.1| - 5.4e-14 52.3 0.2 1.1e-13 51.2 0.1 1.7 2 0 0 2 2 2 1 alpha/beta hydrolase fold MaoC_dehydratas PF01575.14 gi|284167565|ref|YP_003405843.1| - 1.1e-19 70.0 0.2 1.4e-19 69.6 0.1 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.1 gi|284167565|ref|YP_003405843.1| - 2.3e-11 43.5 1.1 4.9e-11 42.5 0.7 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase TRAM PF01938.15 gi|284167565|ref|YP_003405843.1| - 0.093 12.5 0.0 0.29 10.9 0.0 1.9 2 0 0 2 2 2 0 TRAM domain Acyl-CoA_dh_1 PF00441.19 gi|284167566|ref|YP_003405844.1| - 1.4e-50 171.2 2.3 2.3e-50 170.6 1.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167566|ref|YP_003405844.1| - 1e-34 119.5 1.2 1.7e-34 118.8 0.1 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|284167566|ref|YP_003405844.1| - 5.2e-23 81.7 2.6 9.3e-23 80.9 1.8 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167566|ref|YP_003405844.1| - 2e-19 68.8 1.0 1.3e-18 66.2 0.3 2.3 1 1 1 2 2 2 2 Acyl-CoA dehydrogenase, middle domain ArgK PF03308.11 gi|284167567|ref|YP_003405845.1| - 1.2e-94 316.0 5.4 1.6e-94 315.6 3.7 1.1 1 0 0 1 1 1 1 ArgK protein cobW PF02492.14 gi|284167567|ref|YP_003405845.1| - 7e-08 32.1 1.5 7.3e-07 28.7 1.1 2.2 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.1 gi|284167567|ref|YP_003405845.1| - 3.7e-06 27.7 1.2 2e-05 25.3 0.0 2.4 2 1 0 2 2 2 1 AAA domain SRP54 PF00448.17 gi|284167567|ref|YP_003405845.1| - 1.5e-05 24.5 0.3 5.7e-05 22.6 0.2 1.9 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|284167567|ref|YP_003405845.1| - 3.9e-05 23.2 0.1 8e-05 22.2 0.1 1.7 1 1 0 1 1 1 1 AAA-like domain ATP_bind_1 PF03029.12 gi|284167567|ref|YP_003405845.1| - 5.9e-05 22.7 0.0 0.00015 21.4 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.22 gi|284167567|ref|YP_003405845.1| - 6.4e-05 22.4 0.0 0.16 11.4 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain AAA_18 PF13238.1 gi|284167567|ref|YP_003405845.1| - 8.2e-05 22.9 0.4 0.0032 17.7 0.1 2.4 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|284167567|ref|YP_003405845.1| - 0.00013 21.7 0.1 0.00034 20.3 0.1 1.7 1 0 0 1 1 1 1 NTPase AAA_16 PF13191.1 gi|284167567|ref|YP_003405845.1| - 0.00013 21.9 0.3 0.00042 20.3 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.1 gi|284167567|ref|YP_003405845.1| - 0.00014 21.4 6.0 0.0005 19.7 0.1 3.2 3 0 0 3 3 3 1 Part of AAA domain AAA_30 PF13604.1 gi|284167567|ref|YP_003405845.1| - 0.00016 21.3 0.0 0.00037 20.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.22 gi|284167567|ref|YP_003405845.1| - 0.00041 20.6 0.1 0.0007 19.9 0.1 1.4 1 0 0 1 1 1 1 ABC transporter TrwB_AAD_bind PF10412.4 gi|284167567|ref|YP_003405845.1| - 0.001 17.8 0.0 0.0018 17.0 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.18 gi|284167567|ref|YP_003405845.1| - 0.0013 18.1 1.0 0.0021 17.4 0.3 1.6 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.1 gi|284167567|ref|YP_003405845.1| - 0.0014 18.7 0.0 0.0049 17.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|284167567|ref|YP_003405845.1| - 0.0034 16.8 0.1 0.0086 15.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_28 PF13521.1 gi|284167567|ref|YP_003405845.1| - 0.0054 16.7 1.5 0.0064 16.4 0.1 1.8 2 0 0 2 2 1 1 AAA domain MobB PF03205.9 gi|284167567|ref|YP_003405845.1| - 0.0072 16.0 0.2 0.017 14.7 0.1 1.8 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|284167567|ref|YP_003405845.1| - 0.0075 15.3 0.0 0.015 14.3 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin KAP_NTPase PF07693.9 gi|284167567|ref|YP_003405845.1| - 0.01 14.8 0.0 0.014 14.4 0.0 1.2 1 0 0 1 1 1 1 KAP family P-loop domain KTI12 PF08433.5 gi|284167567|ref|YP_003405845.1| - 0.011 15.0 0.0 0.019 14.1 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 MMR_HSR1 PF01926.18 gi|284167567|ref|YP_003405845.1| - 0.012 15.5 0.1 0.028 14.3 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF258 PF03193.11 gi|284167567|ref|YP_003405845.1| - 0.013 14.7 0.1 0.023 13.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|284167567|ref|YP_003405845.1| - 0.018 14.4 0.7 0.1 11.9 0.0 2.5 2 1 1 3 3 3 0 AAA domain PRK PF00485.13 gi|284167567|ref|YP_003405845.1| - 0.02 14.4 0.1 0.056 12.9 0.0 1.8 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.1 gi|284167567|ref|YP_003405845.1| - 0.036 13.9 0.1 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|284167567|ref|YP_003405845.1| - 0.037 12.8 0.0 0.06 12.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.7 gi|284167567|ref|YP_003405845.1| - 0.045 13.3 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain KaiC PF06745.8 gi|284167567|ref|YP_003405845.1| - 0.078 12.0 0.6 0.12 11.4 0.1 1.6 2 0 0 2 2 2 0 KaiC Miro PF08477.8 gi|284167567|ref|YP_003405845.1| - 0.085 13.3 0.1 0.19 12.2 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein DUF815 PF05673.8 gi|284167567|ref|YP_003405845.1| - 0.15 10.9 0.0 0.24 10.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_14 PF13173.1 gi|284167567|ref|YP_003405845.1| - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.12 gi|284167567|ref|YP_003405845.1| - 0.15 11.3 0.1 0.29 10.4 0.0 1.5 2 0 0 2 2 1 0 Thymidylate kinase Viral_helicase1 PF01443.13 gi|284167567|ref|YP_003405845.1| - 0.18 11.3 0.0 0.3 10.5 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase B12-binding PF02310.14 gi|284167568|ref|YP_003405846.1| - 1.2e-19 70.3 0.9 1.4e-19 70.0 0.6 1.1 1 0 0 1 1 1 1 B12 binding domain BcrAD_BadFG PF01869.15 gi|284167568|ref|YP_003405846.1| - 0.0059 15.9 0.1 0.015 14.6 0.0 1.6 1 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family Staph_haemo PF05480.6 gi|284167568|ref|YP_003405846.1| - 0.044 13.4 0.1 0.14 11.8 0.0 1.9 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Peripla_BP_6 PF13458.1 gi|284167568|ref|YP_003405846.1| - 0.073 12.4 0.0 0.085 12.1 0.0 1.1 1 0 0 1 1 1 0 Periplasmic binding protein Acetyltransf_1 PF00583.19 gi|284167569|ref|YP_003405847.1| - 3e-16 59.2 0.0 4e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|284167569|ref|YP_003405847.1| - 1.8e-15 57.0 0.1 2.3e-15 56.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|284167569|ref|YP_003405847.1| - 5.8e-14 52.3 0.0 9e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|284167569|ref|YP_003405847.1| - 1.1e-10 41.5 0.0 1.6e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|284167569|ref|YP_003405847.1| - 9.2e-08 31.9 0.0 1.7e-07 31.1 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|284167569|ref|YP_003405847.1| - 3.5e-07 29.8 0.0 5.4e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.1 gi|284167569|ref|YP_003405847.1| - 1.8e-05 24.9 0.1 2.2e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|284167569|ref|YP_003405847.1| - 0.00086 19.1 0.0 0.0017 18.2 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.1 gi|284167569|ref|YP_003405847.1| - 0.0013 18.6 0.0 0.002 18.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|284167569|ref|YP_003405847.1| - 0.0019 18.1 0.2 0.003 17.5 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF2156 PF09924.4 gi|284167569|ref|YP_003405847.1| - 0.059 12.1 0.0 0.067 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2156) MM_CoA_mutase PF01642.17 gi|284167570|ref|YP_003405848.1| - 6.7e-189 628.3 0.2 7.7e-189 628.1 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Usp PF00582.21 gi|284167571|ref|YP_003405849.1| - 1.9e-23 83.1 0.5 2.4e-23 82.9 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family 7TMR-DISM_7TM PF07695.6 gi|284167572|ref|YP_003405850.1| - 0.085 12.5 1.6 0.088 12.4 1.1 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling SecG PF03840.9 gi|284167572|ref|YP_003405850.1| - 0.17 11.6 1.0 0.23 11.2 0.7 1.4 1 1 0 1 1 1 0 Preprotein translocase SecG subunit SSF PF00474.12 gi|284167573|ref|YP_003405851.1| - 9.8e-42 143.0 34.0 9.8e-42 143.0 23.6 2.0 2 0 0 2 2 2 2 Sodium:solute symporter family DUF3311 PF11755.3 gi|284167574|ref|YP_003405852.1| - 0.0001 21.7 3.1 0.00014 21.3 2.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) DUF4212 PF13937.1 gi|284167574|ref|YP_003405852.1| - 0.0084 16.0 7.2 0.013 15.5 5.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4212) DUF4233 PF14017.1 gi|284167574|ref|YP_003405852.1| - 0.03 14.2 8.4 0.61 10.0 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4233) HAD_2 PF13419.1 gi|284167575|ref|YP_003405853.1| - 7.4e-26 91.4 0.1 8.8e-26 91.1 0.1 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|284167575|ref|YP_003405853.1| - 0.00052 19.8 0.0 0.077 12.8 0.0 2.4 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|284167575|ref|YP_003405853.1| - 0.0026 17.9 0.0 0.0029 17.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|284167575|ref|YP_003405853.1| - 0.0032 17.9 0.0 0.0056 17.1 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|284167575|ref|YP_003405853.1| - 0.0054 16.4 0.1 0.023 14.3 0.0 2.0 2 0 0 2 2 2 1 HAD-hyrolase-like DehI PF10778.4 gi|284167576|ref|YP_003405854.1| - 8.9e-17 61.0 0.0 1.3e-08 34.4 0.0 2.7 2 1 1 3 3 3 2 Halocarboxylic acid dehydrogenase DehI AMP-binding PF00501.23 gi|284167577|ref|YP_003405855.1| - 8.1e-85 284.7 0.0 9.7e-85 284.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|284167577|ref|YP_003405855.1| - 1.3e-19 70.8 0.3 3.7e-19 69.4 0.1 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain 4HBT_2 PF13279.1 gi|284167578|ref|YP_003405856.1| - 6.6e-08 33.0 0.0 7.7e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.17 gi|284167578|ref|YP_003405856.1| - 1.7e-07 31.2 0.1 2.2e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 3HCDH_N PF02737.13 gi|284167579|ref|YP_003405857.1| - 1.5e-60 203.9 0.4 1.8e-60 203.6 0.3 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|284167579|ref|YP_003405857.1| - 3.6e-34 117.0 0.1 8.3e-33 112.6 0.0 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|284167579|ref|YP_003405857.1| - 0.00031 20.4 0.1 0.00052 19.7 0.0 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|284167579|ref|YP_003405857.1| - 0.00047 20.0 0.5 0.0012 18.6 0.2 1.9 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|284167579|ref|YP_003405857.1| - 0.001 19.4 0.5 0.0064 16.8 0.1 2.3 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 gi|284167579|ref|YP_003405857.1| - 0.0033 16.8 0.2 0.009 15.4 0.1 1.8 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|284167579|ref|YP_003405857.1| - 0.011 14.8 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DAO PF01266.19 gi|284167579|ref|YP_003405857.1| - 0.14 11.0 0.2 0.21 10.4 0.2 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase DapB_N PF01113.15 gi|284167579|ref|YP_003405857.1| - 0.4 10.6 3.0 1.3 8.9 1.9 2.1 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Acyl-CoA_dh_1 PF00441.19 gi|284167580|ref|YP_003405858.1| - 4.3e-54 182.6 1.7 5.9e-54 182.2 1.2 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167580|ref|YP_003405858.1| - 1.9e-32 112.2 0.1 4.3e-32 111.0 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|284167580|ref|YP_003405858.1| - 2.4e-23 82.8 3.6 4e-23 82.1 2.5 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167580|ref|YP_003405858.1| - 1.7e-20 72.2 0.0 3.9e-20 71.1 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Bac_luciferase PF00296.15 gi|284167581|ref|YP_003405859.1| - 9.2e-68 228.6 7.8 1e-67 228.4 5.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase IclR PF01614.13 gi|284167582|ref|YP_003405860.1| - 3.1e-34 117.4 0.0 5.6e-34 116.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167582|ref|YP_003405860.1| - 1.5e-12 46.8 0.0 4e-12 45.5 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|284167582|ref|YP_003405860.1| - 1.1e-06 27.8 0.0 3.3e-06 26.3 0.0 1.9 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|284167582|ref|YP_003405860.1| - 2.2e-06 27.2 0.0 6.2e-06 25.8 0.0 1.8 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|284167582|ref|YP_003405860.1| - 3.2e-06 26.6 0.0 3.1e-05 23.5 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|284167582|ref|YP_003405860.1| - 9.3e-06 25.2 0.0 6.9e-05 22.4 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|284167582|ref|YP_003405860.1| - 5.8e-05 23.3 0.5 0.0059 16.9 0.0 2.8 3 0 0 3 3 2 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|284167582|ref|YP_003405860.1| - 6.6e-05 22.6 0.1 0.00096 18.9 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|284167582|ref|YP_003405860.1| - 0.0015 18.4 0.0 0.0076 16.1 0.0 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain DUF742 PF05331.6 gi|284167582|ref|YP_003405860.1| - 0.0016 18.0 0.0 0.0036 16.8 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF742) HTH_45 PF14947.1 gi|284167582|ref|YP_003405860.1| - 0.0047 16.7 0.0 0.0099 15.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_36 PF13730.1 gi|284167582|ref|YP_003405860.1| - 0.0092 16.0 0.0 0.034 14.2 0.0 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|284167582|ref|YP_003405860.1| - 0.012 15.3 0.0 0.026 14.2 0.0 1.5 1 0 0 1 1 1 0 MarR family FeoC PF09012.5 gi|284167582|ref|YP_003405860.1| - 0.028 14.1 0.1 0.085 12.5 0.0 1.8 2 0 0 2 2 1 0 FeoC like transcriptional regulator HTH_11 PF08279.7 gi|284167582|ref|YP_003405860.1| - 0.039 13.5 0.0 0.12 11.9 0.0 1.9 1 1 1 2 2 2 0 HTH domain HTH_23 PF13384.1 gi|284167582|ref|YP_003405860.1| - 0.045 13.4 0.0 1.2 8.8 0.0 2.7 2 0 0 2 2 2 0 Homeodomain-like domain HTH_AsnC-type PF13404.1 gi|284167582|ref|YP_003405860.1| - 0.05 13.1 0.0 0.14 11.6 0.0 1.8 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_40 PF14493.1 gi|284167582|ref|YP_003405860.1| - 0.09 13.0 0.1 0.28 11.4 0.0 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain PCI PF01399.22 gi|284167582|ref|YP_003405860.1| - 0.095 13.0 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 PCI domain DUF1803 PF08820.5 gi|284167582|ref|YP_003405860.1| - 0.1 12.3 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) DUF1488 PF07369.6 gi|284167582|ref|YP_003405860.1| - 0.11 12.3 0.2 0.27 11.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1488) PEPcase PF00311.12 gi|284167583|ref|YP_003405861.1| - 6.4e-240 798.2 0.0 8.2e-240 797.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.1 gi|284167583|ref|YP_003405861.1| - 1.5e-06 26.8 0.0 2.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Activator-TraM PF11657.3 gi|284167583|ref|YP_003405861.1| - 0.016 14.6 2.0 0.034 13.6 0.2 2.4 3 0 0 3 3 3 0 Transcriptional activator TraM EamA PF00892.15 gi|284167584|ref|YP_003405862.1| - 7.8e-21 74.4 25.9 6.9e-13 48.7 8.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|284167584|ref|YP_003405862.1| - 0.001 19.2 27.2 0.022 14.9 5.4 3.2 1 1 3 4 4 4 2 Multidrug resistance efflux transporter UPF0546 PF10639.4 gi|284167584|ref|YP_003405862.1| - 0.0033 17.2 0.8 0.0033 17.2 0.6 2.1 2 0 0 2 2 2 1 Uncharacterised protein family UPF0546 Aldo_ket_red PF00248.16 gi|284167585|ref|YP_003405863.1| - 2.6e-55 187.2 0.0 3e-55 187.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family GFO_IDH_MocA PF01408.17 gi|284167586|ref|YP_003405864.1| - 8.1e-25 87.6 1.3 8.1e-25 87.6 0.9 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.19 gi|284167586|ref|YP_003405864.1| - 0.029 14.6 0.1 0.071 13.4 0.1 1.6 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DRTGG PF07085.7 gi|284167586|ref|YP_003405864.1| - 0.093 12.3 0.3 0.35 10.5 0.2 1.8 1 1 1 2 2 2 0 DRTGG domain DUF364 PF04016.7 gi|284167586|ref|YP_003405864.1| - 0.1 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF364) F420_oxidored PF03807.12 gi|284167586|ref|YP_003405864.1| - 0.14 12.5 0.5 0.5 10.8 0.1 2.0 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.17 gi|284167587|ref|YP_003405865.1| - 2.4e-23 82.8 0.0 4.3e-23 82.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|284167587|ref|YP_003405865.1| - 5.7e-15 55.1 0.1 1.3e-14 53.9 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.12 gi|284167587|ref|YP_003405865.1| - 1.4e-05 25.4 0.0 4.8e-05 23.7 0.0 2.0 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh PF03435.13 gi|284167587|ref|YP_003405865.1| - 0.00069 18.6 0.0 0.00099 18.1 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase ox_reductase_C PF08635.5 gi|284167587|ref|YP_003405865.1| - 0.0032 16.9 0.0 0.04 13.3 0.0 2.1 1 1 0 1 1 1 1 Putative oxidoreductase C terminal AP_endonuc_2 PF01261.19 gi|284167588|ref|YP_003405866.1| - 5.1e-21 74.9 2.0 5.6e-21 74.8 1.0 1.3 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.7 gi|284167588|ref|YP_003405866.1| - 0.038 13.5 0.0 0.08 12.5 0.0 1.5 1 0 0 1 1 1 0 AP endonuclease family 2 C terminus Pyr_redox_2 PF07992.9 gi|284167589|ref|YP_003405867.1| - 8.6e-17 61.6 0.3 1.3e-16 61.0 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|284167589|ref|YP_003405867.1| - 2.9e-10 40.4 0.3 2.2e-08 34.3 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|284167589|ref|YP_003405867.1| - 6.5e-08 32.8 2.1 0.0012 18.9 0.0 3.5 1 1 3 4 4 4 3 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|284167589|ref|YP_003405867.1| - 4e-05 23.4 1.3 0.15 11.8 0.0 3.2 3 0 0 3 3 3 2 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.16 gi|284167589|ref|YP_003405867.1| - 0.018 14.5 1.2 1.3 8.5 0.2 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.1 gi|284167589|ref|YP_003405867.1| - 0.027 14.4 0.1 8.1 6.5 0.0 2.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain DUF1641 PF07849.6 gi|284167589|ref|YP_003405867.1| - 0.11 12.1 0.2 3 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1641) Spore_SspJ PF09575.5 gi|284167589|ref|YP_003405867.1| - 0.17 12.0 0.1 0.52 10.5 0.1 1.8 1 0 0 1 1 1 0 Small spore protein J (Spore_SspJ) ADH_N PF08240.7 gi|284167590|ref|YP_003405868.1| - 2.3e-29 101.3 0.9 1.3e-28 98.9 0.4 2.2 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|284167590|ref|YP_003405868.1| - 6.2e-16 58.1 0.0 9.1e-16 57.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|284167590|ref|YP_003405868.1| - 3e-07 31.3 0.1 5.5e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_24 PF13578.1 gi|284167590|ref|YP_003405868.1| - 0.011 16.5 0.0 0.031 15.1 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Phytase PF02333.10 gi|284167590|ref|YP_003405868.1| - 0.044 12.4 0.0 0.06 12.0 0.0 1.2 1 0 0 1 1 1 0 Phytase TPP_enzyme_N PF02776.13 gi|284167591|ref|YP_003405869.1| - 2.4e-60 202.9 0.1 2.8e-58 196.2 0.1 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|284167591|ref|YP_003405869.1| - 8.5e-42 142.1 0.0 1.9e-41 141.0 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.16 gi|284167591|ref|YP_003405869.1| - 6.7e-41 139.4 0.0 1e-38 132.3 0.0 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PNTB PF02233.11 gi|284167591|ref|YP_003405869.1| - 0.041 12.6 0.0 0.067 11.9 0.0 1.2 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit DUF3584 PF12128.3 gi|284167591|ref|YP_003405869.1| - 0.12 9.7 0.0 0.16 9.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Lactamase_B_2 PF12706.2 gi|284167593|ref|YP_003405871.1| - 6.9e-18 64.8 0.5 8.9e-18 64.5 0.4 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|284167593|ref|YP_003405871.1| - 5.4e-13 48.9 0.0 7.5e-13 48.5 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|284167593|ref|YP_003405871.1| - 0.0021 17.7 12.5 0.01 15.5 7.9 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Bac_luciferase PF00296.15 gi|284167594|ref|YP_003405872.1| - 5.1e-55 186.7 10.3 5.6e-55 186.6 7.1 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase MR_MLE_C PF13378.1 gi|284167595|ref|YP_003405873.1| - 2.3e-30 104.8 0.0 5.2e-30 103.6 0.0 1.7 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.11 gi|284167595|ref|YP_003405873.1| - 2.2e-18 66.3 0.0 4.8e-18 65.2 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MR_MLE PF01188.16 gi|284167595|ref|YP_003405873.1| - 8.4e-15 55.0 1.6 1.7e-14 54.1 0.2 2.3 3 0 0 3 3 3 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Enolase_N PF03952.11 gi|284167595|ref|YP_003405873.1| - 0.0006 19.7 0.0 0.0021 18.0 0.0 1.9 2 0 0 2 2 2 1 Enolase, N-terminal domain Hydrolase PF00702.21 gi|284167595|ref|YP_003405873.1| - 0.016 15.6 0.1 0.36 11.2 0.0 2.3 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase ADH_N PF08240.7 gi|284167596|ref|YP_003405874.1| - 9.6e-31 105.7 0.5 1.9e-30 104.8 0.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|284167596|ref|YP_003405874.1| - 5.9e-26 90.5 0.0 8.6e-26 90.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.14 gi|284167596|ref|YP_003405874.1| - 0.058 12.5 0.0 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Methyltransf_24 PF13578.1 gi|284167596|ref|YP_003405874.1| - 0.077 13.8 0.0 0.17 12.7 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.2 gi|284167596|ref|YP_003405874.1| - 0.093 13.3 0.4 0.2 12.2 0.2 1.6 1 0 0 1 1 1 0 Methyltransferase domain Aldedh PF00171.17 gi|284167597|ref|YP_003405875.1| - 1.2e-138 462.3 0.3 1.4e-138 462.0 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family UPF0150 PF03681.10 gi|284167597|ref|YP_003405875.1| - 0.0069 15.9 1.8 6.8 6.4 0.0 4.0 4 0 0 4 4 4 2 Uncharacterised protein family (UPF0150) IclR PF01614.13 gi|284167598|ref|YP_003405876.1| - 2.2e-36 124.4 0.1 3.4e-36 123.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167598|ref|YP_003405876.1| - 8.3e-07 28.5 0.2 1.2e-05 24.8 0.0 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.15 gi|284167598|ref|YP_003405876.1| - 0.00026 20.5 0.3 0.00048 19.7 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|284167598|ref|YP_003405876.1| - 0.00027 20.5 0.1 0.009 15.6 0.0 2.5 2 0 0 2 2 2 1 MarR family HTH_38 PF13936.1 gi|284167598|ref|YP_003405876.1| - 0.0011 18.4 0.4 0.0079 15.7 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_40 PF14493.1 gi|284167598|ref|YP_003405876.1| - 0.0044 17.1 0.6 0.0099 16.0 0.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_20 PF12840.2 gi|284167598|ref|YP_003405876.1| - 0.0045 16.7 0.1 0.01 15.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|284167598|ref|YP_003405876.1| - 0.005 16.5 0.0 0.01 15.4 0.0 1.5 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.11 gi|284167598|ref|YP_003405876.1| - 0.011 15.8 0.0 0.028 14.5 0.0 1.6 1 0 0 1 1 1 0 Penicillinase repressor HTH_34 PF13601.1 gi|284167598|ref|YP_003405876.1| - 0.012 15.6 0.0 0.022 14.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|284167598|ref|YP_003405876.1| - 0.015 14.8 0.1 0.04 13.4 0.0 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain TrmB PF01978.14 gi|284167598|ref|YP_003405876.1| - 0.018 14.6 0.0 0.054 13.2 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|284167598|ref|YP_003405876.1| - 0.02 14.2 0.0 0.041 13.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GerE PF00196.14 gi|284167598|ref|YP_003405876.1| - 0.02 14.2 0.1 0.064 12.5 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_27 PF13463.1 gi|284167598|ref|YP_003405876.1| - 0.048 13.9 0.3 0.18 12.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|284167598|ref|YP_003405876.1| - 0.091 12.4 0.0 1 9.0 0.0 2.3 2 0 0 2 2 2 0 HTH domain ADH_N PF08240.7 gi|284167599|ref|YP_003405877.1| - 4.3e-08 32.8 0.0 7.2e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|284167599|ref|YP_003405877.1| - 1.2e-05 24.8 0.0 2.4e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AP_endonuc_2 PF01261.19 gi|284167600|ref|YP_003405878.1| - 2.7e-20 72.5 1.9 4.1e-20 71.9 1.3 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.7 gi|284167600|ref|YP_003405878.1| - 0.0097 15.4 0.4 0.046 13.2 0.0 2.3 2 0 0 2 2 2 1 AP endonuclease family 2 C terminus Raftlin PF15250.1 gi|284167600|ref|YP_003405878.1| - 0.11 10.9 0.0 0.15 10.5 0.0 1.2 1 0 0 1 1 1 0 Raftlin DUF1859 PF08948.5 gi|284167600|ref|YP_003405878.1| - 0.16 11.7 0.0 0.5 10.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1859) ANF_receptor PF01094.23 gi|284167601|ref|YP_003405879.1| - 0.16 10.6 0.4 0.17 10.6 0.3 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region ABC_tran PF00005.22 gi|284167602|ref|YP_003405880.1| - 4.9e-32 111.0 0.0 8.1e-32 110.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|284167602|ref|YP_003405880.1| - 5.3e-09 36.4 0.0 0.00056 19.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain TOBE PF03459.12 gi|284167602|ref|YP_003405880.1| - 0.00039 20.4 0.2 0.001 19.0 0.1 1.8 2 0 0 2 2 1 1 TOBE domain AAA_15 PF13175.1 gi|284167602|ref|YP_003405880.1| - 0.00047 19.3 0.0 0.039 12.9 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.1 gi|284167602|ref|YP_003405880.1| - 0.0035 17.3 0.2 0.0059 16.5 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|284167602|ref|YP_003405880.1| - 0.0071 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|284167602|ref|YP_003405880.1| - 0.0089 16.1 0.0 0.019 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|284167602|ref|YP_003405880.1| - 0.019 15.1 0.0 0.043 14.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|284167602|ref|YP_003405880.1| - 0.026 13.2 0.0 0.032 12.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_5 PF07728.9 gi|284167602|ref|YP_003405880.1| - 0.029 14.1 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.16 gi|284167602|ref|YP_003405880.1| - 0.04 13.0 0.0 0.069 12.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TOBE_2 PF08402.5 gi|284167602|ref|YP_003405880.1| - 0.045 13.7 0.0 0.13 12.2 0.0 1.9 1 0 0 1 1 1 0 TOBE domain AAA_25 PF13481.1 gi|284167602|ref|YP_003405880.1| - 0.049 13.0 0.0 0.14 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|284167602|ref|YP_003405880.1| - 0.052 13.8 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|284167602|ref|YP_003405880.1| - 0.091 12.3 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|284167602|ref|YP_003405880.1| - 0.1 12.9 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|284167602|ref|YP_003405880.1| - 0.14 11.9 0.2 0.31 10.8 0.1 1.6 1 0 0 1 1 1 0 Part of AAA domain BPD_transp_1 PF00528.17 gi|284167603|ref|YP_003405881.1| - 7.6e-16 58.1 19.7 7.6e-16 58.1 13.7 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|284167604|ref|YP_003405882.1| - 2.8e-17 62.8 15.8 2.8e-17 62.8 11.0 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component TMEM191C PF15194.1 gi|284167604|ref|YP_003405882.1| - 0.31 10.9 4.0 5.5 6.8 0.0 3.0 3 0 0 3 3 3 0 TMEM191C family SBP_bac_1 PF01547.20 gi|284167605|ref|YP_003405883.1| - 1.5e-17 64.2 4.1 2.6e-17 63.5 1.5 2.2 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.1 gi|284167605|ref|YP_003405883.1| - 4.5e-17 62.6 3.3 5.9e-17 62.2 2.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.4 gi|284167605|ref|YP_003405883.1| - 0.0045 16.8 5.6 0.0045 16.8 3.9 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence HpcH_HpaI PF03328.9 gi|284167606|ref|YP_003405884.1| - 7e-47 159.1 1.1 8.8e-47 158.8 0.7 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family GFO_IDH_MocA PF01408.17 gi|284167607|ref|YP_003405885.1| - 4.9e-24 85.1 0.1 1e-23 84.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Polyketide_cyc2 PF10604.4 gi|284167607|ref|YP_003405885.1| - 0.012 15.7 0.0 0.032 14.3 0.0 1.7 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport PPDK_N PF01326.14 gi|284167608|ref|YP_003405886.1| - 5.1e-108 361.0 3.9 5.1e-108 361.0 2.7 1.8 1 1 1 2 2 2 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|284167608|ref|YP_003405886.1| - 1.9e-83 279.7 0.0 2.8e-83 279.2 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|284167608|ref|YP_003405886.1| - 2.3e-28 97.5 1.9 6.5e-28 96.1 1.3 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain AP_endonuc_2 PF01261.19 gi|284167608|ref|YP_003405886.1| - 0.012 14.9 0.2 0.062 12.5 0.1 2.4 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel Sugar_tr PF00083.19 gi|284167609|ref|YP_003405887.1| - 1.7e-124 415.8 26.9 1.9e-124 415.6 18.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|284167609|ref|YP_003405887.1| - 3.7e-35 121.2 67.2 1.4e-30 106.1 27.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|284167609|ref|YP_003405887.1| - 1.2e-05 23.8 25.6 0.00069 18.1 1.6 3.3 1 1 1 3 3 3 2 MFS/sugar transport protein TRI12 PF06609.8 gi|284167609|ref|YP_003405887.1| - 2.3e-05 22.8 14.8 0.00018 19.8 3.1 2.3 2 0 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) MFS_1_like PF12832.2 gi|284167609|ref|YP_003405887.1| - 0.0075 16.0 2.0 0.05 13.4 0.0 3.1 3 0 0 3 3 3 1 MFS_1 like family Gly-zipper_Omp PF13488.1 gi|284167609|ref|YP_003405887.1| - 0.013 15.0 3.4 0.092 12.3 2.3 2.5 1 0 0 1 1 1 0 Glycine zipper Rick_17kDa_Anti PF05433.10 gi|284167609|ref|YP_003405887.1| - 0.026 14.1 4.9 0.12 12.0 3.4 2.2 1 0 0 1 1 1 0 Glycine zipper 2TM domain DUF656 PF04920.7 gi|284167609|ref|YP_003405887.1| - 0.14 11.8 1.6 0.32 10.6 1.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF656) Gly-zipper_YMGG PF13441.1 gi|284167609|ref|YP_003405887.1| - 0.41 10.1 7.5 0.19 11.2 2.3 2.6 2 0 0 2 2 2 0 YMGG-like Gly-zipper MFS_3 PF05977.8 gi|284167609|ref|YP_003405887.1| - 0.6 8.1 21.5 0.026 12.6 6.8 2.2 2 0 0 2 2 2 0 Transmembrane secretion effector Gly-zipper_OmpA PF13436.1 gi|284167609|ref|YP_003405887.1| - 3.3 7.4 5.0 3 7.5 1.9 2.1 1 1 1 2 2 2 0 Glycine-zipper containing OmpA-like membrane domain Usp PF00582.21 gi|284167610|ref|YP_003405888.1| - 3e-18 66.3 0.2 3.4e-18 66.1 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family HEAT_2 PF13646.1 gi|284167612|ref|YP_003405890.1| - 3.8e-15 55.9 12.8 1.7e-06 28.2 0.6 3.3 1 1 2 3 3 3 3 HEAT repeats HEAT_EZ PF13513.1 gi|284167612|ref|YP_003405890.1| - 5.9e-13 48.8 11.5 0.00074 19.9 0.3 4.7 1 1 4 5 5 5 5 HEAT-like repeat HEAT PF02985.17 gi|284167612|ref|YP_003405890.1| - 3.9e-09 35.8 2.4 0.069 13.2 0.0 5.4 5 0 0 5 5 5 2 HEAT repeat zinc_ribbon_2 PF13240.1 gi|284167612|ref|YP_003405890.1| - 0.0021 17.4 7.6 0.0021 17.4 5.2 1.7 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|284167612|ref|YP_003405890.1| - 0.0027 17.4 0.4 0.0054 16.5 0.3 1.4 1 0 0 1 1 1 1 Double zinc ribbon Adaptin_N PF01602.15 gi|284167612|ref|YP_003405890.1| - 0.0056 15.0 0.0 0.52 8.5 0.0 2.2 1 1 1 2 2 2 2 Adaptin N terminal region RPT PF13446.1 gi|284167612|ref|YP_003405890.1| - 0.061 12.7 0.3 8.2 5.9 0.0 2.7 2 0 0 2 2 2 0 A repeated domain in UCH-protein zf-FPG_IleRS PF06827.9 gi|284167612|ref|YP_003405890.1| - 0.093 12.3 3.3 0.19 11.4 2.3 1.5 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-ribbon_3 PF13248.1 gi|284167612|ref|YP_003405890.1| - 0.13 11.4 9.0 0.45 9.7 6.2 1.9 1 1 0 1 1 1 0 zinc-ribbon domain HEAT_PBS PF03130.11 gi|284167612|ref|YP_003405890.1| - 0.18 12.3 6.9 4.9 7.9 0.1 4.4 4 0 0 4 4 4 0 PBS lyase HEAT-like repeat Auto_anti-p27 PF06677.7 gi|284167612|ref|YP_003405890.1| - 4.2 7.2 5.4 8 6.3 3.7 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) FecCD PF01032.13 gi|284167613|ref|YP_003405891.1| - 2.8e-88 295.7 36.0 3.8e-88 295.3 25.0 1.2 1 0 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.13 gi|284167614|ref|YP_003405892.1| - 3.7e-19 68.7 0.0 1e-18 67.3 0.0 1.7 1 1 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.4 gi|284167614|ref|YP_003405892.1| - 0.11 12.5 0.3 0.32 11.1 0.2 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Peripla_BP_2 PF01497.13 gi|284167615|ref|YP_003405893.1| - 3.9e-12 45.8 0.0 5e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.4 gi|284167615|ref|YP_003405893.1| - 5.3e-05 22.8 0.2 0.00013 21.6 0.2 1.7 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Peripla_BP_2 PF01497.13 gi|284167617|ref|YP_003405895.1| - 2.8e-16 59.3 0.0 3.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.4 gi|284167617|ref|YP_003405895.1| - 0.0015 18.3 0.3 0.0028 17.5 0.2 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Pyr_redox_2 PF07992.9 gi|284167618|ref|YP_003405896.1| - 1.5e-07 31.4 0.0 2.5e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|284167618|ref|YP_003405896.1| - 3.6e-06 26.3 5.0 2e-05 23.9 1.2 2.1 1 1 1 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|284167618|ref|YP_003405896.1| - 1.2e-05 24.3 0.1 1.9e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|284167618|ref|YP_003405896.1| - 1.6e-05 24.1 1.4 5.6e-05 22.3 0.2 2.2 1 1 1 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.19 gi|284167618|ref|YP_003405896.1| - 1.8e-05 23.8 2.0 3.6e-05 22.7 0.3 2.1 2 1 0 2 2 2 1 FAD binding domain DAO PF01266.19 gi|284167618|ref|YP_003405896.1| - 2.6e-05 23.3 9.5 0.00011 21.2 0.5 3.2 3 1 0 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|284167618|ref|YP_003405896.1| - 0.00046 20.1 0.1 0.0011 18.9 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|284167618|ref|YP_003405896.1| - 0.0014 17.1 0.1 0.0025 16.3 0.1 1.4 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.12 gi|284167618|ref|YP_003405896.1| - 0.0017 17.5 0.0 0.0032 16.5 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.1 gi|284167618|ref|YP_003405896.1| - 0.028 14.4 0.2 0.47 10.4 0.1 2.5 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|284167618|ref|YP_003405896.1| - 0.035 13.0 0.5 0.27 10.1 0.1 2.3 3 0 0 3 3 3 0 Lycopene cyclase protein Pyr_redox PF00070.22 gi|284167618|ref|YP_003405896.1| - 0.035 14.4 1.5 0.093 13.1 0.1 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Unstab_antitox PF09720.5 gi|284167618|ref|YP_003405896.1| - 4.1 7.1 9.0 1.4 8.6 0.5 3.4 3 1 0 3 3 3 0 Putative addiction module component IclR PF01614.13 gi|284167619|ref|YP_003405897.1| - 2.7e-31 107.9 0.1 1.4e-30 105.6 0.0 1.9 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167619|ref|YP_003405897.1| - 1.4e-11 43.8 0.3 1.4e-11 43.8 0.2 2.3 3 0 0 3 3 3 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|284167619|ref|YP_003405897.1| - 0.004 16.9 0.6 0.12 12.1 0.1 2.9 3 0 0 3 3 3 1 Helix-turn-helix domain TrmB PF01978.14 gi|284167619|ref|YP_003405897.1| - 0.0051 16.4 0.0 0.079 12.6 0.0 2.4 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|284167619|ref|YP_003405897.1| - 0.034 13.9 0.3 0.1 12.4 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_24 PF13412.1 gi|284167619|ref|YP_003405897.1| - 0.07 12.5 0.1 0.18 11.2 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF1803 PF08820.5 gi|284167619|ref|YP_003405897.1| - 0.089 12.5 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) TrbH PF07283.6 gi|284167619|ref|YP_003405897.1| - 0.09 12.6 0.0 1.7 8.5 0.0 2.4 2 0 0 2 2 2 0 Conjugal transfer protein TrbH SMC_Nse1 PF07574.8 gi|284167619|ref|YP_003405897.1| - 0.11 12.1 0.1 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex Porin_OmpL1 PF11389.3 gi|284167619|ref|YP_003405897.1| - 0.12 11.4 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Leptospira porin protein OmpL1 AAA_23 PF13476.1 gi|284167620|ref|YP_003405898.1| - 1e-11 45.5 15.0 1e-11 45.5 10.4 4.8 1 1 2 3 3 2 1 AAA domain IncA PF04156.9 gi|284167620|ref|YP_003405898.1| - 6e-08 32.5 93.4 0.00021 20.9 17.9 4.8 3 2 2 5 5 5 4 IncA protein Spc7 PF08317.6 gi|284167620|ref|YP_003405898.1| - 2.3e-07 29.7 67.5 0.011 14.4 14.7 4.3 2 2 2 4 4 4 4 Spc7 kinetochore protein Atg14 PF10186.4 gi|284167620|ref|YP_003405898.1| - 8.3e-07 28.2 62.0 0.014 14.3 11.1 4.1 1 1 3 4 4 4 4 UV radiation resistance protein and autophagy-related subunit 14 GAS PF13851.1 gi|284167620|ref|YP_003405898.1| - 2.1e-06 27.1 65.6 0.0024 17.0 18.3 4.5 2 2 2 4 4 4 3 Growth-arrest specific micro-tubule binding AAA_27 PF13514.1 gi|284167620|ref|YP_003405898.1| - 3.5e-06 25.0 56.3 0.00045 18.0 11.3 2.7 1 1 1 2 2 2 2 AAA domain AAA_13 PF13166.1 gi|284167620|ref|YP_003405898.1| - 1.3e-05 23.8 53.0 0.0014 17.2 17.4 3.3 1 1 3 4 4 4 4 AAA domain DUF3584 PF12128.3 gi|284167620|ref|YP_003405898.1| - 2.6e-05 21.8 59.8 4e-05 21.2 6.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) TPR_MLP1_2 PF07926.7 gi|284167620|ref|YP_003405898.1| - 3.7e-05 23.4 65.8 0.083 12.6 8.5 5.0 2 2 2 4 4 4 3 TPR/MLP1/MLP2-like protein Seryl_tRNA_N PF02403.17 gi|284167620|ref|YP_003405898.1| - 4.6e-05 23.3 64.5 0.0039 17.1 5.9 5.5 2 2 1 4 4 4 3 Seryl-tRNA synthetase N-terminal domain DivIC PF04977.10 gi|284167620|ref|YP_003405898.1| - 6.9e-05 22.2 79.9 0.039 13.4 0.7 9.2 3 2 5 8 8 8 3 Septum formation initiator Reo_sigmaC PF04582.7 gi|284167620|ref|YP_003405898.1| - 0.00022 20.5 19.7 0.0087 15.2 1.1 4.0 2 1 2 4 4 3 3 Reovirus sigma C capsid protein ERM PF00769.14 gi|284167620|ref|YP_003405898.1| - 0.00034 20.2 68.9 0.0056 16.2 13.2 4.1 1 1 2 4 4 4 2 Ezrin/radixin/moesin family CENP-F_leu_zip PF10473.4 gi|284167620|ref|YP_003405898.1| - 0.00034 20.4 82.9 0.00099 18.9 15.2 6.1 3 2 3 6 6 6 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TBPIP PF07106.8 gi|284167620|ref|YP_003405898.1| - 0.00092 18.7 69.4 0.13 11.8 3.9 5.2 2 2 3 5 5 5 3 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) EzrA PF06160.7 gi|284167620|ref|YP_003405898.1| - 0.001 17.3 62.8 0.033 12.3 9.6 3.8 2 2 1 3 3 3 2 Septation ring formation regulator, EzrA DUF972 PF06156.8 gi|284167620|ref|YP_003405898.1| - 0.0025 18.1 54.8 0.07 13.4 0.3 6.1 2 2 4 6 6 6 2 Protein of unknown function (DUF972) Vps51 PF08700.6 gi|284167620|ref|YP_003405898.1| - 0.0038 17.0 5.1 0.0038 17.0 3.5 7.0 3 2 2 5 5 3 1 Vps51/Vps67 ATG16 PF08614.6 gi|284167620|ref|YP_003405898.1| - 0.0042 16.9 74.3 0.11 12.2 13.9 5.6 2 2 3 5 5 5 3 Autophagy protein 16 (ATG16) Laminin_II PF06009.7 gi|284167620|ref|YP_003405898.1| - 0.0047 16.6 6.7 0.0047 16.6 4.6 5.5 2 2 2 4 4 4 1 Laminin Domain II NPV_P10 PF05531.7 gi|284167620|ref|YP_003405898.1| - 0.0053 16.9 41.2 0.16 12.2 0.7 6.9 2 2 6 8 8 8 1 Nucleopolyhedrovirus P10 protein WEMBL PF05701.6 gi|284167620|ref|YP_003405898.1| - 0.0073 14.8 57.7 0.11 10.9 16.4 2.7 2 1 0 2 2 2 2 Weak chloroplast movement under blue light FliJ PF02050.11 gi|284167620|ref|YP_003405898.1| - 0.0076 16.2 57.9 0.054 13.5 1.7 5.5 2 2 2 4 4 4 2 Flagellar FliJ protein CCDC155 PF14662.1 gi|284167620|ref|YP_003405898.1| - 0.011 15.3 75.4 0.73 9.3 16.2 4.3 2 2 2 4 4 4 0 Coiled-coil region of CCDC155 DUF4041 PF13250.1 gi|284167620|ref|YP_003405898.1| - 0.013 15.0 1.7 19 4.9 0.0 4.4 4 0 0 4 4 3 0 Domain of unknown function (DUF4041) HALZ PF02183.13 gi|284167620|ref|YP_003405898.1| - 0.016 14.9 0.1 0.016 14.9 0.1 8.4 8 1 1 9 9 9 0 Homeobox associated leucine zipper Tropomyosin_1 PF12718.2 gi|284167620|ref|YP_003405898.1| - 0.024 14.4 88.8 0.046 13.5 19.3 4.9 2 2 2 4 4 4 0 Tropomyosin like Filament PF00038.16 gi|284167620|ref|YP_003405898.1| - 0.038 13.4 68.7 0.11 11.8 5.2 4.9 2 2 2 4 4 4 0 Intermediate filament protein Spectrin PF00435.16 gi|284167620|ref|YP_003405898.1| - 0.04 14.1 56.6 0.069 13.4 3.8 5.4 2 2 3 5 5 5 0 Spectrin repeat MAD PF05557.8 gi|284167620|ref|YP_003405898.1| - 0.055 11.5 63.6 0.32 9.0 18.6 2.8 2 1 0 2 2 2 0 Mitotic checkpoint protein FliD_N PF02465.13 gi|284167620|ref|YP_003405898.1| - 0.11 12.9 29.8 3.4 8.0 0.1 7.1 3 2 3 6 6 6 0 Flagellar hook-associated protein 2 N-terminus Fez1 PF06818.10 gi|284167620|ref|YP_003405898.1| - 0.2 11.6 59.6 0.22 11.5 17.3 3.3 1 1 1 2 2 2 0 Fez1 Mnd1 PF03962.10 gi|284167620|ref|YP_003405898.1| - 0.2 11.2 63.8 0.32 10.6 1.1 5.3 1 1 3 4 4 4 0 Mnd1 family WXG100 PF06013.7 gi|284167620|ref|YP_003405898.1| - 0.28 11.2 29.6 8.1 6.5 4.2 8.0 3 2 3 7 7 7 0 Proteins of 100 residues with WXG DUF342 PF03961.8 gi|284167620|ref|YP_003405898.1| - 0.3 9.4 51.6 0.3 9.4 5.8 4.3 1 1 2 4 4 4 0 Protein of unknown function (DUF342) Fib_alpha PF08702.5 gi|284167620|ref|YP_003405898.1| - 0.34 11.0 51.5 0.25 11.4 12.3 4.8 2 2 3 5 5 5 0 Fibrinogen alpha/beta chain family TMF_TATA_bd PF12325.3 gi|284167620|ref|YP_003405898.1| - 0.37 10.5 83.8 1.5 8.5 1.6 6.2 3 2 3 6 6 5 0 TATA element modulatory factor 1 TATA binding ALIX_LYPXL_bnd PF13949.1 gi|284167620|ref|YP_003405898.1| - 0.63 8.9 60.2 0.093 11.6 16.3 2.8 2 1 0 2 2 2 0 ALIX V-shaped domain binding to HIV BLOC1_2 PF10046.4 gi|284167620|ref|YP_003405898.1| - 0.82 9.8 57.4 3.9 7.6 2.7 7.8 2 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_I PF06008.9 gi|284167620|ref|YP_003405898.1| - 1 8.5 55.5 0.4 9.9 15.9 3.6 2 2 0 2 2 2 0 Laminin Domain I Prefoldin_2 PF01920.15 gi|284167620|ref|YP_003405898.1| - 1.1 9.0 79.8 2.3 8.0 13.8 8.7 2 2 3 6 6 6 0 Prefoldin subunit ADIP PF11559.3 gi|284167620|ref|YP_003405898.1| - 1.4 8.8 68.3 0.66 9.8 9.6 5.7 3 2 2 6 6 5 0 Afadin- and alpha -actinin-Binding DUF4201 PF13870.1 gi|284167620|ref|YP_003405898.1| - 1.4 8.2 58.1 0.26 10.7 13.2 5.0 1 1 4 5 5 5 0 Domain of unknown function (DUF4201) Prefoldin PF02996.12 gi|284167620|ref|YP_003405898.1| - 1.5 8.5 55.9 0.085 12.5 0.5 8.6 2 2 6 8 8 8 0 Prefoldin subunit DUF812 PF05667.6 gi|284167620|ref|YP_003405898.1| - 1.5 7.2 62.0 0.72 8.2 3.9 3.8 2 2 2 4 4 4 0 Protein of unknown function (DUF812) APG6 PF04111.7 gi|284167620|ref|YP_003405898.1| - 1.8 7.5 75.1 1.5 7.7 20.9 4.5 2 2 2 4 4 4 0 Autophagy protein Apg6 FH2 PF02181.18 gi|284167620|ref|YP_003405898.1| - 2.6 6.8 39.5 0.38 9.5 0.3 4.4 3 1 1 4 4 4 0 Formin Homology 2 Domain DUF4200 PF13863.1 gi|284167620|ref|YP_003405898.1| - 4.8 7.1 78.9 3.7 7.4 3.4 6.7 3 2 2 5 5 4 0 Domain of unknown function (DUF4200) DUF869 PF05911.6 gi|284167620|ref|YP_003405898.1| - 4.9 5.2 60.3 3.8 5.6 18.1 2.6 1 1 2 3 3 3 0 Plant protein of unknown function (DUF869) DUF4140 PF13600.1 gi|284167620|ref|YP_003405898.1| - 5.7 7.4 65.1 10 6.6 2.4 8.3 2 2 5 7 7 7 0 N-terminal domain of unknown function (DUF4140) COG2 PF06148.6 gi|284167620|ref|YP_003405898.1| - 9 6.1 49.6 2.5 7.9 5.1 6.8 3 2 3 6 6 5 0 COG (conserved oligomeric Golgi) complex component, COG2 IclR PF01614.13 gi|284167622|ref|YP_003405900.1| - 9.3e-30 102.9 0.0 1.5e-29 102.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.5 gi|284167622|ref|YP_003405900.1| - 1.7e-09 37.1 0.0 9.2e-09 34.7 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|284167622|ref|YP_003405900.1| - 6.3e-05 22.6 0.0 0.0023 17.6 0.0 2.5 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF1803 PF08820.5 gi|284167622|ref|YP_003405900.1| - 0.0031 17.1 0.0 0.0051 16.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1803) HTH_20 PF12840.2 gi|284167622|ref|YP_003405900.1| - 0.0095 15.7 0.0 0.024 14.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|284167622|ref|YP_003405900.1| - 0.019 14.7 0.4 0.036 13.8 0.3 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix MarR_2 PF12802.2 gi|284167622|ref|YP_003405900.1| - 0.019 14.5 0.0 0.039 13.6 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.1 gi|284167622|ref|YP_003405900.1| - 0.031 13.6 0.0 0.18 11.2 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|284167622|ref|YP_003405900.1| - 0.039 13.6 0.0 0.091 12.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Amidohydro_2 PF04909.9 gi|284167623|ref|YP_003405901.1| - 3.6e-44 151.3 0.4 4e-44 151.2 0.3 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.16 gi|284167623|ref|YP_003405901.1| - 0.0012 18.1 0.0 0.33 10.0 0.0 2.3 2 0 0 2 2 2 2 TatD related DNase Cupin_2 PF07883.6 gi|284167624|ref|YP_003405902.1| - 1.8e-10 40.1 1.6 2.7e-10 39.5 1.1 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.7 gi|284167624|ref|YP_003405902.1| - 9.2e-05 21.7 0.3 9.2e-05 21.7 0.2 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF861) AraC_binding_2 PF14525.1 gi|284167624|ref|YP_003405902.1| - 0.00064 19.3 0.0 0.00083 18.9 0.0 1.2 1 0 0 1 1 1 1 AraC-binding-like domain AraC_binding PF02311.14 gi|284167624|ref|YP_003405902.1| - 0.0045 16.6 0.1 0.0064 16.1 0.1 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.17 gi|284167624|ref|YP_003405902.1| - 0.017 14.5 0.1 0.024 14.0 0.0 1.3 1 1 0 1 1 1 0 Cupin Bac_luciferase PF00296.15 gi|284167625|ref|YP_003405903.1| - 1.2e-56 192.1 1.9 1.3e-55 188.7 0.3 1.9 1 1 1 2 2 2 2 Luciferase-like monooxygenase Acyl-CoA_dh_1 PF00441.19 gi|284167626|ref|YP_003405904.1| - 1.9e-50 170.8 1.4 2.8e-50 170.3 1.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|284167626|ref|YP_003405904.1| - 4.1e-26 91.7 0.1 1.7e-25 89.7 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|284167626|ref|YP_003405904.1| - 4.8e-24 85.1 2.0 8.2e-24 84.3 1.4 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|284167626|ref|YP_003405904.1| - 4.4e-19 67.7 0.1 9.3e-19 66.6 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Thiolase_N PF00108.18 gi|284167627|ref|YP_003405905.1| - 7.9e-11 41.4 0.1 5.3e-10 38.7 0.0 2.0 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|284167627|ref|YP_003405905.1| - 4.6e-09 35.7 3.6 1.3e-08 34.2 0.2 2.9 2 2 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|284167627|ref|YP_003405905.1| - 2.8e-06 26.9 1.9 7.2e-06 25.6 1.3 1.6 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain DUF35 PF01796.12 gi|284167628|ref|YP_003405906.1| - 1.3e-07 31.6 1.3 4.6e-07 29.9 0.9 2.0 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|284167628|ref|YP_003405906.1| - 2.6e-06 27.1 3.1 2.6e-06 27.1 2.1 1.9 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) ACP_syn_III_C PF08541.5 gi|284167628|ref|YP_003405906.1| - 0.0022 17.9 0.1 0.0055 16.6 0.1 1.7 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal