#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|109644368|ref|YP_659398.1|	184	Phage_integrase	Phage	83.2	1.2	4.3e-27	1.6e-23	3	168	9	168	7	173	0.91
gi|109644368|ref|YP_659398.1|	184	HTH_8	Bacterial	2.8	0.0	0.022	81	6	18	27	39	23	48	0.85
gi|109644368|ref|YP_659398.1|	184	HTH_8	Bacterial	6.7	0.0	0.0014	5.1	28	39	104	115	102	117	0.84
gi|109644368|ref|YP_659398.1|	184	HTH_8	Bacterial	0.3	0.0	0.13	4.9e+02	4	24	123	143	120	143	0.86
gi|109644368|ref|YP_659398.1|	184	DUF3435	Protein	12.6	0.4	1.1e-05	0.04	169	249	102	183	91	184	0.86
gi|109644368|ref|YP_659398.1|	184	RST	RCD1-SRO-TAF4	11.4	0.0	5.3e-05	0.2	23	55	87	119	82	131	0.89
gi|109644368|ref|YP_659398.1|	184	RST	RCD1-SRO-TAF4	-2.1	0.0	0.9	3.3e+03	32	45	164	177	158	178	0.84
gi|109644370|ref|YP_659400.1|	248	DUF4636	Domain	11.7	0.0	8.7e-06	0.13	67	135	111	179	101	203	0.90
gi|109644371|ref|YP_659401.1|	250	Yip1	Yip1	-0.7	2.6	0.056	8.2e+02	102	142	43	93	18	105	0.62
gi|109644371|ref|YP_659401.1|	250	Yip1	Yip1	7.3	12.3	0.0002	3	52	166	110	224	80	237	0.74
gi|109644372|ref|YP_659402.1|	162	bPH_2	Bacterial	17.6	0.0	3.9e-07	0.0029	2	80	78	157	77	157	0.86
gi|109644372|ref|YP_659402.1|	162	DUF912	Nucleopolyhedrovirus	3.9	0.1	0.0072	53	55	77	13	35	1	41	0.72
gi|109644372|ref|YP_659402.1|	162	DUF912	Nucleopolyhedrovirus	6.3	0.6	0.0012	9.2	61	95	51	85	45	95	0.84
gi|109644373|ref|YP_659403.1|	467	A2M_N	MG2	-3.3	0.0	1.5	1.1e+04	40	58	75	92	67	108	0.72
gi|109644373|ref|YP_659403.1|	467	A2M_N	MG2	-3.6	0.0	1.8	1.3e+04	46	72	141	166	136	169	0.60
gi|109644373|ref|YP_659403.1|	467	A2M_N	MG2	18.6	0.0	2.1e-07	0.0016	20	96	201	273	196	276	0.81
gi|109644373|ref|YP_659403.1|	467	Herpes_UL16	Herpesvirus	13.7	0.1	2.9e-06	0.022	108	169	282	345	257	350	0.58
gi|109644376|ref|YP_659406.1|	133	RHH_1	Ribbon-helix-helix	16.0	0.0	1e-06	0.0076	3	36	5	39	4	42	0.93
gi|109644376|ref|YP_659406.1|	133	Arc	Arc-like	12.6	0.0	1e-05	0.076	8	34	5	31	1	43	0.86
gi|109644377|ref|YP_659407.1|	125	Antistasin	Antistasin	10.2	4.7	4.6e-05	0.68	6	26	2	25	1	25	0.89
gi|109644377|ref|YP_659407.1|	125	Antistasin	Antistasin	3.2	0.7	0.0073	1.1e+02	6	15	46	54	42	56	0.77
gi|109644378|ref|YP_659408.1|	115	DUF3377	Domain	4.7	0.3	0.0015	22	8	27	12	31	7	33	0.76
gi|109644378|ref|YP_659408.1|	115	DUF3377	Domain	6.4	0.8	0.00043	6.4	6	28	28	50	26	54	0.80
gi|109644379|ref|YP_659409.1|	1208	Methyltransf_26	Methyltransferase	37.9	0.0	3.8e-13	1.4e-09	3	116	424	767	422	768	0.81
gi|109644379|ref|YP_659409.1|	1208	N6_Mtase	N-6	9.3	0.0	0.00014	0.51	6	40	326	354	322	369	0.77
gi|109644379|ref|YP_659409.1|	1208	N6_Mtase	N-6	11.2	0.0	3.6e-05	0.13	45	99	420	511	405	527	0.76
gi|109644379|ref|YP_659409.1|	1208	N6_Mtase	N-6	1.1	0.0	0.045	1.7e+02	123	160	651	690	637	697	0.76
gi|109644379|ref|YP_659409.1|	1208	Eco57I	Eco57I	9.3	0.0	0.00037	1.4	3	19	654	670	651	691	0.77
gi|109644379|ref|YP_659409.1|	1208	Eco57I	Eco57I	13.3	0.0	2.1e-05	0.078	24	92	737	805	711	819	0.84
gi|109644379|ref|YP_659409.1|	1208	UPF0020	Putative	8.6	0.0	0.00033	1.2	28	84	421	512	417	533	0.77
gi|109644379|ref|YP_659409.1|	1208	UPF0020	Putative	-0.6	0.0	0.22	8.3e+02	98	116	646	663	597	667	0.84
gi|109644380|ref|YP_659410.1|	1227	PLDc_2	PLD-like	76.6	0.0	5.2e-25	1.3e-21	3	126	28	198	26	198	0.90
gi|109644380|ref|YP_659410.1|	1227	PLDc_2	PLD-like	-0.5	0.0	0.37	9.1e+02	19	65	589	654	577	664	0.72
gi|109644380|ref|YP_659410.1|	1227	Helicase_C	Helicase	-4.3	0.0	6	1.5e+04	17	31	110	124	108	130	0.83
gi|109644380|ref|YP_659410.1|	1227	Helicase_C	Helicase	52.7	0.1	1.1e-17	2.7e-14	22	78	806	876	796	876	0.89
gi|109644380|ref|YP_659410.1|	1227	SNF2_N	SNF2	47.1	0.0	5.4e-16	1.3e-12	20	239	275	515	264	540	0.77
gi|109644380|ref|YP_659410.1|	1227	ResIII	Type	-2.3	0.0	1.3	3.3e+03	3	22	107	126	106	153	0.79
gi|109644380|ref|YP_659410.1|	1227	ResIII	Type	36.5	0.0	1.6e-12	4e-09	16	182	274	422	220	424	0.77
gi|109644380|ref|YP_659410.1|	1227	ResIII	Type	-3.3	0.1	2.7	6.8e+03	92	125	1111	1143	1091	1166	0.56
gi|109644380|ref|YP_659410.1|	1227	DUF2075	Uncharacterized	16.8	0.0	1e-06	0.0025	4	116	283	403	281	411	0.68
gi|109644380|ref|YP_659410.1|	1227	DUF2075	Uncharacterized	-3.0	0.0	1.1	2.6e+03	30	75	1153	1201	1141	1208	0.78
gi|109644380|ref|YP_659410.1|	1227	AAA_22	AAA	13.6	0.0	2.1e-05	0.052	8	101	284	385	277	424	0.74
gi|109644382|ref|YP_659412.1|	81	Lumazine_bd	Lumazine-binding	13.4	0.2	2e-05	0.06	12	66	15	78	7	81	0.61
gi|109644382|ref|YP_659412.1|	81	OmpH	Outer	13.3	1.1	1.9e-05	0.057	35	97	15	81	9	81	0.79
gi|109644382|ref|YP_659412.1|	81	Surfac_D-trimer	Lung	7.0	1.4	0.0015	4.5	7	26	61	80	41	81	0.87
gi|109644382|ref|YP_659412.1|	81	FlxA	FlxA-like	10.0	2.1	0.00021	0.61	25	61	41	77	2	81	0.80
gi|109644382|ref|YP_659412.1|	81	DUF536	Protein	-2.1	0.1	1.1	3.3e+03	19	22	47	50	40	52	0.61
gi|109644382|ref|YP_659412.1|	81	DUF536	Protein	10.6	3.2	0.00012	0.35	28	45	64	81	61	81	0.91
gi|109644383|ref|YP_659413.1|	116	CheZ	Chemotaxis	13.1	0.0	1.1e-05	0.053	89	146	14	71	5	79	0.90
gi|109644383|ref|YP_659413.1|	116	LytR_C	LytR	9.7	0.1	0.00021	1	5	32	7	34	6	56	0.89
gi|109644383|ref|YP_659413.1|	116	LytR_C	LytR	3.1	0.0	0.024	1.2e+02	19	63	63	105	58	114	0.66
gi|109644383|ref|YP_659413.1|	116	zf-His_Me_endon	Zinc-binding	11.9	0.0	3.3e-05	0.16	76	95	2	21	1	38	0.87
gi|109644384|ref|YP_659414.1|	148	RNase_H	RNase	42.8	0.2	1.2e-14	5.8e-11	8	130	12	145	5	147	0.69
gi|109644384|ref|YP_659414.1|	148	RVT_3	Reverse	38.1	0.1	1.9e-13	9.4e-10	3	86	56	146	54	148	0.86
gi|109644384|ref|YP_659414.1|	148	PLC-beta_C	PLC-beta	14.0	0.0	5.9e-06	0.029	26	66	92	132	85	134	0.89
gi|109644385|ref|YP_659415.1|	163	HNH	HNH	29.6	1.8	1.7e-10	4.3e-07	1	45	31	75	31	77	0.98
gi|109644385|ref|YP_659415.1|	163	ADH_N	Alcohol	-2.0	0.0	1.2	3e+03	69	75	30	36	19	41	0.71
gi|109644385|ref|YP_659415.1|	163	ADH_N	Alcohol	12.1	0.0	4.7e-05	0.12	46	83	46	83	43	101	0.87
gi|109644385|ref|YP_659415.1|	163	Endonuclease_7	Recombination	10.4	0.2	0.00015	0.38	6	46	10	50	5	57	0.69
gi|109644385|ref|YP_659415.1|	163	Endonuclease_7	Recombination	3.3	0.6	0.026	65	18	36	59	77	51	84	0.73
gi|109644385|ref|YP_659415.1|	163	zf-C2H2_6	C2H2-type	11.3	0.3	9.7e-05	0.24	2	16	29	43	28	44	0.83
gi|109644385|ref|YP_659415.1|	163	zf-C2H2_6	C2H2-type	-0.8	0.6	0.61	1.5e+03	3	8	66	71	65	72	0.84
gi|109644385|ref|YP_659415.1|	163	Cytochrome_C7	Cytochrome	8.4	5.1	0.00062	1.5	6	50	22	76	15	91	0.60
gi|109644385|ref|YP_659415.1|	163	Cytochrom_NNT	NapC/NirT	2.9	5.1	0.025	62	109	165	12	72	1	72	0.57
gi|109644385|ref|YP_659415.1|	163	Cytochrom_NNT	NapC/NirT	9.9	1.4	0.00018	0.45	120	144	59	83	49	98	0.72
gi|109644386|ref|YP_659416.1|	649	D5_N	D5	35.3	0.0	7e-13	1e-08	66	147	194	278	169	282	0.77
gi|109644386|ref|YP_659416.1|	649	D5_N	D5	3.5	0.0	0.0046	69	29	78	279	321	272	347	0.83
gi|109644390|ref|YP_659420.1|	314	CbiA	CobQ/CobB/MinD/ParA	74.4	0.0	4.4e-24	7.3e-21	3	174	12	233	10	259	0.82
gi|109644390|ref|YP_659420.1|	314	MipZ	ATPase	27.2	0.0	1.1e-09	1.8e-06	8	100	15	107	10	122	0.76
gi|109644390|ref|YP_659420.1|	314	MipZ	ATPase	12.3	0.0	3.9e-05	0.065	88	129	139	179	96	202	0.77
gi|109644390|ref|YP_659420.1|	314	AAA_31	AAA	32.6	0.0	3.9e-11	6.4e-08	9	150	16	180	10	187	0.83
gi|109644390|ref|YP_659420.1|	314	AAA_31	AAA	-2.7	0.0	2.8	4.7e+03	52	69	279	295	266	303	0.61
gi|109644390|ref|YP_659420.1|	314	YhjQ	YhjQ	19.5	0.1	2.9e-07	0.00048	10	39	16	45	13	49	0.95
gi|109644390|ref|YP_659420.1|	314	YhjQ	YhjQ	5.0	0.0	0.0081	13	107	147	141	178	79	236	0.72
gi|109644390|ref|YP_659420.1|	314	ArsA_ATPase	Anion-transporting	18.3	0.5	5.5e-07	0.00091	6	37	13	44	8	159	0.84
gi|109644390|ref|YP_659420.1|	314	AAA_19	Part	12.1	0.0	7.5e-05	0.12	20	56	18	50	16	70	0.87
gi|109644390|ref|YP_659420.1|	314	Hydrolase_4	Putative	11.9	0.0	8.9e-05	0.15	15	53	8	46	2	67	0.82
gi|109644390|ref|YP_659420.1|	314	DUF853	Bacterial	10.6	0.1	7.6e-05	0.13	20	70	7	57	1	87	0.80
gi|109644390|ref|YP_659420.1|	314	SRP54	SRP54-type	9.4	0.1	0.00037	0.61	9	35	16	42	8	46	0.87
gi|109644390|ref|YP_659420.1|	314	SRP54	SRP54-type	-0.5	0.0	0.4	6.6e+02	83	112	148	175	140	222	0.51
gi|109644390|ref|YP_659420.1|	314	SRP54	SRP54-type	-2.3	0.0	1.4	2.3e+03	36	56	274	294	269	308	0.74
gi|109644391|ref|YP_659421.1|	130	T2SF	Type	15.1	0.1	7.2e-06	0.015	28	102	30	99	9	107	0.83
gi|109644391|ref|YP_659421.1|	130	Nterm_IS4	Insertion	15.1	0.0	8e-06	0.017	45	88	63	106	33	111	0.78
gi|109644391|ref|YP_659421.1|	130	Pex19	Pex19	13.6	0.9	1.8e-05	0.037	38	118	7	87	1	100	0.64
gi|109644391|ref|YP_659421.1|	130	Phage_int_SAM_1	Phage	11.9	0.0	8.5e-05	0.18	11	55	46	82	40	108	0.68
gi|109644391|ref|YP_659421.1|	130	DUF935	Protein	10.9	1.0	6e-05	0.13	430	490	21	85	2	93	0.71
gi|109644391|ref|YP_659421.1|	130	RHH_1	Ribbon-helix-helix	5.2	0.4	0.01	21	7	20	2	15	1	17	0.89
gi|109644391|ref|YP_659421.1|	130	RHH_1	Ribbon-helix-helix	-3.7	0.0	6	1.3e+04	28	34	36	42	35	44	0.60
gi|109644391|ref|YP_659421.1|	130	RHH_1	Ribbon-helix-helix	-1.9	0.1	1.6	3.4e+03	13	16	66	69	59	82	0.59
gi|109644391|ref|YP_659421.1|	130	RHH_1	Ribbon-helix-helix	9.3	0.0	0.00049	1	22	34	92	104	89	105	0.90
gi|109644391|ref|YP_659421.1|	130	RHH_1	Ribbon-helix-helix	-1.7	0.0	1.4	3e+03	8	21	112	125	111	128	0.73
gi|109644391|ref|YP_659421.1|	130	DUF4404	Domain	7.8	1.5	0.0019	4.1	2	48	5	52	4	71	0.73
gi|109644391|ref|YP_659421.1|	130	DUF4404	Domain	2.0	0.0	0.13	2.7e+02	20	33	57	70	51	104	0.57
gi|109644394|ref|YP_659424.1|	150	AAA_assoc	Domain	12.0	0.0	2.1e-05	0.15	16	57	75	116	58	144	0.83
gi|109644394|ref|YP_659424.1|	150	TAT_signal	TAT	11.4	1.9	3.4e-05	0.25	2	20	5	23	4	28	0.89
gi|109644396|ref|YP_659426.1|	329	Mrr_cat	Restriction	84.2	0.0	1.1e-27	5.3e-24	4	114	1	108	1	109	0.92
gi|109644396|ref|YP_659426.1|	329	WYL	WYL	2.4	0.0	0.024	1.2e+02	115	143	19	46	3	59	0.78
gi|109644396|ref|YP_659426.1|	329	WYL	WYL	71.6	0.2	1.4e-23	6.9e-20	4	90	154	240	153	314	0.80
gi|109644396|ref|YP_659426.1|	329	Mrr_cat_2	Restriction	14.8	0.1	3.8e-06	0.019	12	94	12	91	2	105	0.84
gi|109644396|ref|YP_659426.1|	329	Mrr_cat_2	Restriction	-2.5	0.0	0.84	4.1e+03	9	21	114	126	110	173	0.63
gi|109644397|ref|YP_659427.1|	230	Mrr_cat	Restriction	85.7	0.0	2.4e-28	1.8e-24	2	114	14	126	13	127	0.91
gi|109644397|ref|YP_659427.1|	230	Mrr_cat_2	Restriction	26.4	0.2	6.5e-10	4.8e-06	8	102	23	117	15	131	0.87
gi|109644398|ref|YP_659428.1|	307	DUF4352	Domain	2.0	0.0	0.042	2.1e+02	35	55	73	93	68	103	0.87
gi|109644398|ref|YP_659428.1|	307	DUF4352	Domain	34.8	0.2	3e-12	1.5e-08	22	108	193	285	184	300	0.80
gi|109644398|ref|YP_659428.1|	307	CARDB	CARDB	12.7	0.0	1.9e-05	0.095	11	54	66	108	61	129	0.79
gi|109644398|ref|YP_659428.1|	307	CARDB	CARDB	-0.8	0.0	0.3	1.5e+03	23	41	211	230	196	288	0.67
gi|109644398|ref|YP_659428.1|	307	DUF1883	Domain	4.6	0.0	0.0045	22	54	88	94	128	88	133	0.87
gi|109644398|ref|YP_659428.1|	307	DUF1883	Domain	5.1	0.0	0.003	15	34	66	134	166	130	168	0.89
gi|109644399|ref|YP_659429.1|	107	DUF4131	Domain	11.9	0.1	1.4e-05	0.11	9	60	14	60	7	97	0.70
gi|109644399|ref|YP_659429.1|	107	PIRT	Phosphoinositide-interacting	5.3	3.8	0.0014	10	55	98	19	59	13	71	0.77
gi|109644400|ref|YP_659430.1|	184	DUF4352	Domain	10.8	0.0	2.7e-05	0.4	3	56	38	95	36	98	0.88
gi|109644400|ref|YP_659430.1|	184	DUF4352	Domain	13.6	0.0	3.7e-06	0.055	50	112	109	171	107	178	0.81
gi|109644401|ref|YP_659431.1|	218	Resolvase	Resolvase,	117.1	1.7	2.4e-37	5e-34	1	140	3	151	3	152	0.92
gi|109644401|ref|YP_659431.1|	218	Resolvase	Resolvase,	-1.0	0.1	0.65	1.4e+03	111	131	176	196	163	208	0.77
gi|109644401|ref|YP_659431.1|	218	HTH_28	Helix-turn-helix	17.6	0.1	1.3e-06	0.0027	3	34	178	210	176	217	0.92
gi|109644401|ref|YP_659431.1|	218	HTH_23	Homeodomain-like	13.5	0.1	1.9e-05	0.04	16	40	187	211	174	217	0.88
gi|109644401|ref|YP_659431.1|	218	HTH_24	Winged	12.7	0.1	2.9e-05	0.061	9	40	181	211	176	211	0.85
gi|109644401|ref|YP_659431.1|	218	HTH_3	Helix-turn-helix	11.5	0.1	9e-05	0.19	10	32	189	211	186	215	0.90
gi|109644401|ref|YP_659431.1|	218	GntR	Bacterial	-1.7	0.0	0.91	1.9e+03	5	21	126	142	118	145	0.69
gi|109644401|ref|YP_659431.1|	218	GntR	Bacterial	9.8	0.2	0.00023	0.48	22	46	187	210	184	211	0.91
gi|109644401|ref|YP_659431.1|	218	Mg_chelatase_2	Magnesium	11.9	0.3	0.0001	0.21	40	81	47	88	3	94	0.70
gi|109644401|ref|YP_659431.1|	218	Mg_chelatase_2	Magnesium	2.7	0.6	0.078	1.6e+02	6	68	137	208	132	210	0.66
gi|109644402|ref|YP_659432.1|	222	CAP	Cysteine-rich	55.3	0.3	5.6e-19	8.4e-15	3	124	90	220	88	220	0.80
gi|109644403|ref|YP_659433.1|	164	DUF217	Uncharacterized	15.6	0.0	9e-07	0.013	2	47	5	50	4	69	0.82
gi|109644403|ref|YP_659433.1|	164	DUF217	Uncharacterized	2.6	0.0	0.01	1.5e+02	30	53	113	133	102	150	0.74