#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
BCCT	PF02028.12	gi|313122550|ref|YP_004044477.1|	-	7.3e-111	370.7	52.8	8.5e-111	370.5	36.6	1.0	1	0	0	1	1	1	1	BCCT	family	transporter
BPD_transp_1	PF00528.17	gi|313122553|ref|YP_004044480.1|	-	6.6e-15	55.1	15.0	6.6e-15	55.1	10.4	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Herpes_UL49_5	PF05702.6	gi|313122553|ref|YP_004044480.1|	-	0.017	14.9	2.5	0.073	12.9	0.4	2.4	2	0	0	2	2	2	0	Herpesvirus	UL49.5	envelope/tegument	protein
BPD_transp_1	PF00528.17	gi|313122554|ref|YP_004044481.1|	-	4.4e-08	32.8	23.9	4.4e-08	32.8	16.5	2.4	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|313122555|ref|YP_004044482.1|	-	4.8e-37	127.3	0.0	8.6e-37	126.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|313122555|ref|YP_004044482.1|	-	1.7e-13	51.2	0.0	5.2e-08	33.2	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|313122555|ref|YP_004044482.1|	-	1.7e-06	27.3	0.0	0.00094	18.3	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|313122555|ref|YP_004044482.1|	-	9.3e-06	25.0	0.0	0.0093	15.2	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|313122555|ref|YP_004044482.1|	-	1.3e-05	25.9	0.3	9e-05	23.2	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|313122555|ref|YP_004044482.1|	-	1.4e-05	25.2	0.1	3.8e-05	23.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|313122555|ref|YP_004044482.1|	-	5.3e-05	23.2	1.4	0.00029	20.8	1.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|313122555|ref|YP_004044482.1|	-	9.4e-05	22.6	0.0	0.00061	19.9	0.0	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|313122555|ref|YP_004044482.1|	-	0.00042	19.5	0.0	0.00069	18.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|313122555|ref|YP_004044482.1|	-	0.00051	19.4	0.0	0.0024	17.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|313122555|ref|YP_004044482.1|	-	0.0011	18.8	0.0	0.003	17.4	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
NACHT	PF05729.7	gi|313122555|ref|YP_004044482.1|	-	0.0013	18.4	0.3	0.013	15.1	0.0	2.2	2	0	0	2	2	2	1	NACHT	domain
AAA_18	PF13238.1	gi|313122555|ref|YP_004044482.1|	-	0.0017	18.6	0.0	0.0065	16.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|313122555|ref|YP_004044482.1|	-	0.002	18.0	0.0	0.0039	17.0	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Rad17	PF03215.10	gi|313122555|ref|YP_004044482.1|	-	0.0058	15.3	0.0	0.0077	14.9	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_28	PF13521.1	gi|313122555|ref|YP_004044482.1|	-	0.0089	16.0	0.1	0.02	14.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|313122555|ref|YP_004044482.1|	-	0.015	15.4	0.0	0.032	14.4	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
Arch_ATPase	PF01637.13	gi|313122555|ref|YP_004044482.1|	-	0.017	14.8	0.0	0.025	14.3	0.0	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|313122555|ref|YP_004044482.1|	-	0.017	14.8	0.0	0.045	13.4	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|313122555|ref|YP_004044482.1|	-	0.021	14.3	0.0	0.055	13.0	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|313122555|ref|YP_004044482.1|	-	0.022	15.1	0.1	0.035	14.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|313122555|ref|YP_004044482.1|	-	0.029	14.0	0.0	0.13	11.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|313122555|ref|YP_004044482.1|	-	0.037	13.1	0.1	0.37	9.9	0.0	2.0	1	1	1	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
TOBE_2	PF08402.5	gi|313122555|ref|YP_004044482.1|	-	0.044	13.7	0.1	0.15	12.1	0.0	2.0	1	0	0	1	1	1	0	TOBE	domain
Miro	PF08477.8	gi|313122555|ref|YP_004044482.1|	-	0.077	13.4	0.0	0.17	12.4	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_30	PF13604.1	gi|313122555|ref|YP_004044482.1|	-	0.079	12.5	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|313122555|ref|YP_004044482.1|	-	0.085	12.3	0.0	0.22	11.0	0.0	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
ATP-synt_ab	PF00006.20	gi|313122555|ref|YP_004044482.1|	-	0.097	12.1	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|313122555|ref|YP_004044482.1|	-	0.1	12.0	0.0	0.17	11.3	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
Zeta_toxin	PF06414.7	gi|313122555|ref|YP_004044482.1|	-	0.1	11.6	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_19	PF13245.1	gi|313122555|ref|YP_004044482.1|	-	0.12	12.1	0.1	0.5	10.1	0.0	2.1	2	0	0	2	2	1	0	Part	of	AAA	domain
AAA_24	PF13479.1	gi|313122555|ref|YP_004044482.1|	-	0.16	11.5	0.0	0.35	10.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|313122555|ref|YP_004044482.1|	-	0.16	11.8	0.3	1.3	9.0	0.2	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
SBP_bac_8	PF13416.1	gi|313122556|ref|YP_004044483.1|	-	1.7e-11	44.3	6.7	2.6e-11	43.8	4.6	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|313122556|ref|YP_004044483.1|	-	1.6e-08	34.1	1.7	5.1e-08	32.5	0.6	2.0	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
TAT_signal	PF10518.4	gi|313122556|ref|YP_004044483.1|	-	1.1	9.4	3.8	1.8	8.7	2.6	1.4	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Fe-ADH	PF00465.14	gi|313122557|ref|YP_004044484.1|	-	2.5e-111	371.8	2.6	2.8e-111	371.7	1.8	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|313122557|ref|YP_004044484.1|	-	3.3e-17	62.6	1.6	5.2e-11	42.3	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
DUF1485	PF07364.7	gi|313122558|ref|YP_004044485.1|	-	8.4e-88	294.3	0.9	1.1e-87	293.9	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1485)
MlrC_C	PF07171.7	gi|313122558|ref|YP_004044485.1|	-	7.4e-52	175.4	0.1	1.2e-51	174.8	0.1	1.3	1	0	0	1	1	1	1	MlrC	C-terminus
Aldedh	PF00171.17	gi|313122559|ref|YP_004044486.1|	-	7.4e-160	532.2	0.5	9.2e-160	531.9	0.3	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|313122559|ref|YP_004044486.1|	-	2.2e-05	23.4	0.0	4.4e-05	22.3	0.0	1.5	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Gln-synt_C	PF00120.19	gi|313122560|ref|YP_004044487.1|	-	4.1e-73	245.7	0.0	3.9e-72	242.5	0.0	2.0	1	1	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|313122560|ref|YP_004044487.1|	-	6.8e-05	22.3	0.0	0.0076	15.8	0.0	2.3	2	0	0	2	2	2	2	Glutamine	synthetase,	beta-Grasp	domain
PhoD	PF09423.5	gi|313122562|ref|YP_004044489.1|	-	3.2e-78	263.3	1.5	4.6e-78	262.8	1.1	1.2	1	0	0	1	1	1	1	PhoD-like	phosphatase
Laminin_B	PF00052.13	gi|313122562|ref|YP_004044489.1|	-	2.3e-15	56.4	0.0	3.9e-15	55.6	0.0	1.4	1	0	0	1	1	1	1	Laminin	B	(Domain	IV)
fn3	PF00041.16	gi|313122562|ref|YP_004044489.1|	-	0.019	15.0	2.2	0.056	13.5	0.8	2.4	2	0	0	2	2	2	0	Fibronectin	type	III	domain
Thiol-ester_cl	PF10569.4	gi|313122563|ref|YP_004044490.1|	-	0.026	13.7	0.2	0.05	12.8	0.2	1.4	1	0	0	1	1	1	0	Alpha-macro-globulin	thiol-ester	bond-forming	region
Aft1_HRR	PF11787.3	gi|313122563|ref|YP_004044490.1|	-	0.39	11.8	4.0	0.49	11.4	2.5	1.4	1	1	0	1	1	1	0	Aft1	HRR	domain
Pectate_lyase_3	PF12708.2	gi|313122564|ref|YP_004044491.1|	-	1.1e-18	68.2	9.6	1.1e-18	68.2	6.6	2.5	1	1	0	2	2	2	1	Pectate	lyase	superfamily	protein
Beta_helix	PF13229.1	gi|313122564|ref|YP_004044491.1|	-	5.6e-18	65.1	40.4	2.6e-08	33.7	17.7	3.5	1	1	1	2	2	2	2	Right	handed	beta	helix	region
End_N_terminal	PF12218.3	gi|313122564|ref|YP_004044491.1|	-	0.027	13.9	0.3	0.17	11.3	0.0	2.4	2	0	0	2	2	2	0	N	terminal	extension	of	bacteriophage	endosialidase
HTH_20	PF12840.2	gi|313122567|ref|YP_004044494.1|	-	0.027	14.2	0.4	0.12	12.1	0.3	2.0	1	1	0	1	1	1	0	Helix-turn-helix	domain
CopD	PF05425.8	gi|313122568|ref|YP_004044495.1|	-	0.033	14.3	0.9	0.055	13.6	0.2	1.6	1	1	0	1	1	1	0	Copper	resistance	protein	D
Usp	PF00582.21	gi|313122569|ref|YP_004044496.1|	-	1.1e-25	90.5	1.2	1.2e-25	90.2	0.8	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
ATP-grasp_5	PF13549.1	gi|313122569|ref|YP_004044496.1|	-	0.065	12.4	0.1	0.075	12.2	0.0	1.1	1	0	0	1	1	1	0	ATP-grasp	domain
PHO4	PF01384.15	gi|313122570|ref|YP_004044497.1|	-	1.9e-37	128.6	33.5	4.1e-37	127.5	23.2	1.6	1	1	0	1	1	1	1	Phosphate	transporter	family
PQQ_2	PF13360.1	gi|313122571|ref|YP_004044498.1|	-	7.1e-43	146.7	10.9	9.4e-30	103.8	2.9	2.1	1	1	1	2	2	2	2	PQQ-like	domain
PQQ_3	PF13570.1	gi|313122571|ref|YP_004044498.1|	-	6.2e-36	121.6	13.6	1.1e-06	28.6	0.1	8.0	7	1	1	8	8	8	7	PQQ-like	domain
PQQ	PF01011.16	gi|313122571|ref|YP_004044498.1|	-	1.3e-24	84.4	1.4	0.00015	21.1	0.1	6.7	6	0	0	6	6	6	5	PQQ	enzyme	repeat
Arylsulfotrans	PF05935.6	gi|313122571|ref|YP_004044498.1|	-	0.018	13.5	0.0	0.029	12.8	0.0	1.3	1	0	0	1	1	1	0	Arylsulfotransferase	(ASST)
CBM_6	PF03422.10	gi|313122571|ref|YP_004044498.1|	-	0.02	15.0	0.8	0.045	13.9	0.5	1.6	1	0	0	1	1	1	0	Carbohydrate	binding	module	(family	6)
ZU5	PF00791.15	gi|313122571|ref|YP_004044498.1|	-	0.082	12.5	0.0	0.35	10.5	0.0	2.1	1	1	0	1	1	1	0	ZU5	domain
Pentapeptide_3	PF13576.1	gi|313122572|ref|YP_004044499.1|	-	2.1e-09	37.1	37.0	0.00029	20.6	11.4	5.8	3	1	4	7	7	7	6	Pentapeptide	repeats	(9	copies)
Pentapeptide_4	PF13599.1	gi|313122572|ref|YP_004044499.1|	-	0.0035	17.1	8.8	0.77	9.5	4.7	3.7	1	1	1	2	2	2	2	Pentapeptide	repeats	(9	copies)
Pentapeptide	PF00805.17	gi|313122573|ref|YP_004044500.1|	-	6.8e-08	31.5	2.9	1.3e-07	30.7	0.8	2.0	2	0	0	2	2	2	1	Pentapeptide	repeats	(8	copies)
Pentapeptide_3	PF13576.1	gi|313122573|ref|YP_004044500.1|	-	0.061	13.2	0.1	0.22	11.4	0.1	2.0	1	1	0	1	1	1	0	Pentapeptide	repeats	(9	copies)
Pentapeptide_4	PF13599.1	gi|313122573|ref|YP_004044500.1|	-	0.12	12.2	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	Pentapeptide	repeats	(9	copies)
YqjK	PF13997.1	gi|313122573|ref|YP_004044500.1|	-	0.22	11.6	1.7	0.36	11.0	0.1	2.1	2	0	0	2	2	2	0	YqjK-like	protein
Phage_B	PF02304.10	gi|313122573|ref|YP_004044500.1|	-	1.3	9.3	3.3	2.9	8.2	2.2	1.7	1	1	1	2	2	2	0	Scaffold	protein	B
Aldedh	PF00171.17	gi|313122574|ref|YP_004044501.1|	-	4.4e-172	572.5	0.2	5e-172	572.3	0.1	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
TraB	PF01963.12	gi|313122575|ref|YP_004044502.1|	-	0.00051	19.5	0.4	0.95	8.8	0.0	3.6	3	1	0	4	4	4	2	TraB	family
DUF399	PF04187.8	gi|313122575|ref|YP_004044502.1|	-	0.0041	16.6	1.8	0.043	13.3	0.1	2.6	2	1	1	3	3	3	1	Protein	of	unknown	function,	DUF399
TAT_signal	PF10518.4	gi|313122575|ref|YP_004044502.1|	-	0.052	13.5	1.8	0.095	12.7	1.3	1.5	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
IucA_IucC	PF04183.7	gi|313122577|ref|YP_004044504.1|	-	7.8e-51	172.7	0.0	1.2e-50	172.1	0.0	1.3	1	0	0	1	1	1	1	IucA	/	IucC	family
FhuF	PF06276.7	gi|313122577|ref|YP_004044504.1|	-	1.5e-32	112.7	0.0	8.4e-32	110.3	0.0	2.2	3	0	0	3	3	3	1	Ferric	iron	reductase	FhuF-like	transporter
Mus7	PF09462.5	gi|313122577|ref|YP_004044504.1|	-	0.03	13.1	0.0	0.041	12.7	0.0	1.1	1	0	0	1	1	1	0	Mus7/MMS22	family
ABC_tran	PF00005.22	gi|313122578|ref|YP_004044505.1|	-	1.2e-34	119.5	0.0	2.4e-34	118.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
ABC_membrane	PF00664.18	gi|313122578|ref|YP_004044505.1|	-	4e-33	114.9	1.0	5.1e-33	114.6	0.7	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
AAA_16	PF13191.1	gi|313122578|ref|YP_004044505.1|	-	1.6e-06	28.2	2.9	8e-06	25.9	2.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|313122578|ref|YP_004044505.1|	-	1.1e-05	26.2	0.1	2.7e-05	24.9	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|313122578|ref|YP_004044505.1|	-	8.2e-05	21.7	0.1	0.0002	20.5	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_21	PF13304.1	gi|313122578|ref|YP_004044505.1|	-	0.00019	21.4	0.0	0.089	12.7	0.0	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|313122578|ref|YP_004044505.1|	-	0.00044	20.5	0.1	0.0025	18.1	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|313122578|ref|YP_004044505.1|	-	0.00058	19.7	0.0	0.0024	17.7	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|313122578|ref|YP_004044505.1|	-	0.0008	19.5	0.5	0.0072	16.4	0.2	2.4	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|313122578|ref|YP_004044505.1|	-	0.00086	19.5	0.0	0.016	15.3	0.0	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|313122578|ref|YP_004044505.1|	-	0.0012	18.6	0.2	0.0091	15.7	0.1	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|313122578|ref|YP_004044505.1|	-	0.0018	17.4	0.0	0.0034	16.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|313122578|ref|YP_004044505.1|	-	0.0051	16.0	0.2	0.16	11.1	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
NTPase_1	PF03266.10	gi|313122578|ref|YP_004044505.1|	-	0.0051	16.5	0.1	0.56	9.9	0.1	2.4	1	1	0	1	1	1	1	NTPase
AAA_29	PF13555.1	gi|313122578|ref|YP_004044505.1|	-	0.0079	15.7	0.0	0.021	14.3	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|313122578|ref|YP_004044505.1|	-	0.008	15.7	2.2	0.059	12.9	1.3	2.3	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.15	gi|313122578|ref|YP_004044505.1|	-	0.017	14.8	0.0	0.039	13.6	0.0	1.6	1	0	0	1	1	1	0	Adenylylsulphate	kinase
T2SE	PF00437.15	gi|313122578|ref|YP_004044505.1|	-	0.027	13.3	0.0	0.22	10.3	0.0	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|313122578|ref|YP_004044505.1|	-	0.032	13.8	0.0	1.7	8.3	0.0	2.5	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_19	PF13245.1	gi|313122578|ref|YP_004044505.1|	-	0.032	13.9	0.1	0.1	12.3	0.1	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|313122578|ref|YP_004044505.1|	-	0.036	13.4	3.0	0.14	11.5	2.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|313122578|ref|YP_004044505.1|	-	0.04	13.3	0.2	0.15	11.4	0.1	2.0	1	1	1	2	2	2	0	AAA-like	domain
IstB_IS21	PF01695.12	gi|313122578|ref|YP_004044505.1|	-	0.046	13.1	0.1	0.29	10.5	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
SbcCD_C	PF13558.1	gi|313122578|ref|YP_004044505.1|	-	0.066	13.1	0.3	0.33	10.8	0.2	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF87	PF01935.12	gi|313122578|ref|YP_004044505.1|	-	0.067	12.9	0.3	0.15	11.8	0.1	1.7	2	0	0	2	2	1	0	Domain	of	unknown	function	DUF87
AAA_23	PF13476.1	gi|313122578|ref|YP_004044505.1|	-	0.16	12.2	0.0	0.33	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
IucA_IucC	PF04183.7	gi|313122580|ref|YP_004044507.1|	-	9.7e-68	228.1	0.0	1.4e-67	227.6	0.0	1.2	1	0	0	1	1	1	1	IucA	/	IucC	family
FhuF	PF06276.7	gi|313122580|ref|YP_004044507.1|	-	1.8e-35	122.3	0.5	4.2e-35	121.1	0.3	1.6	1	0	0	1	1	1	1	Ferric	iron	reductase	FhuF-like	transporter
Gln-synt_C	PF00120.19	gi|313122581|ref|YP_004044508.1|	-	1.6e-70	237.2	0.0	2e-70	236.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|313122581|ref|YP_004044508.1|	-	0.041	13.4	0.0	1.5	8.4	0.0	3.0	3	0	0	3	3	3	0	Glutamine	synthetase,	beta-Grasp	domain
Aminotran_3	PF00202.16	gi|313122582|ref|YP_004044509.1|	-	8.8e-88	294.3	0.0	1.1e-87	294.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
HCR	PF07111.7	gi|313122582|ref|YP_004044509.1|	-	0.12	10.3	0.0	0.18	9.7	0.0	1.1	1	0	0	1	1	1	0	Alpha	helical	coiled-coil	rod	protein	(HCR)
Pyridoxal_deC	PF00282.14	gi|313122583|ref|YP_004044510.1|	-	1.7e-62	211.0	0.0	2e-62	210.8	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Beta_elim_lyase	PF01212.16	gi|313122583|ref|YP_004044510.1|	-	0.00011	21.5	0.1	0.00022	20.4	0.1	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|313122583|ref|YP_004044510.1|	-	0.0004	19.2	0.0	0.00099	17.9	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
IucA_IucC	PF04183.7	gi|313122584|ref|YP_004044511.1|	-	4e-69	232.6	0.0	5.6e-69	232.1	0.0	1.2	1	0	0	1	1	1	1	IucA	/	IucC	family
FhuF	PF06276.7	gi|313122584|ref|YP_004044511.1|	-	3.1e-32	111.7	0.0	6e-32	110.8	0.0	1.5	1	0	0	1	1	1	1	Ferric	iron	reductase	FhuF-like	transporter
Methyltransf_6	PF03737.10	gi|313122585|ref|YP_004044512.1|	-	1.4e-29	102.9	2.5	1.7e-29	102.6	1.7	1.1	1	0	0	1	1	1	1	Demethylmenaquinone	methyltransferase
PCP_red	PF08369.5	gi|313122585|ref|YP_004044512.1|	-	0.013	15.3	0.1	2.3	8.1	0.0	2.5	2	0	0	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
cobW	PF02492.14	gi|313122585|ref|YP_004044512.1|	-	0.052	12.9	0.0	0.08	12.3	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
DDE_Tnp_1	PF01609.16	gi|313122586|ref|YP_004044513.1|	-	1.2e-07	31.5	0.1	2.3e-07	30.5	0.1	1.4	1	0	0	1	1	1	1	Transposase	DDE	domain
TRAPPC10	PF12584.3	gi|313122588|ref|YP_004044515.1|	-	0.033	13.6	0.0	0.04	13.4	0.0	1.1	1	0	0	1	1	1	0	Trafficking	protein	particle	complex	subunit	10,	TRAPPC10
RNA_pol_Rpb2_5	PF04567.12	gi|313122588|ref|YP_004044515.1|	-	0.11	12.5	0.1	0.17	11.8	0.1	1.4	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	5
UCR_Fe-S_N	PF10399.4	gi|313122589|ref|YP_004044516.1|	-	0.077	12.1	0.0	0.19	10.9	0.0	1.7	1	0	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
Cadherin	PF00028.12	gi|313122590|ref|YP_004044517.1|	-	0.00079	19.6	1.1	0.0013	18.9	0.7	1.3	1	0	0	1	1	1	1	Cadherin	domain
DUF1528	PF07515.6	gi|313122590|ref|YP_004044517.1|	-	0.072	13.1	0.0	0.12	12.3	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1528)
Trypsin	PF00089.21	gi|313122592|ref|YP_004044519.1|	-	0.00057	19.5	2.0	0.001	18.7	1.4	1.3	1	1	0	1	1	1	1	Trypsin
PNPOx_C	PF10590.4	gi|313122593|ref|YP_004044520.1|	-	0.093	12.2	0.4	0.16	11.5	0.3	1.4	1	0	0	1	1	1	0	Pyridoxine	5'-phosphate	oxidase	C-terminal	dimerisation	region
MarR_2	PF12802.2	gi|313122594|ref|YP_004044521.1|	-	1.2e-06	28.0	0.0	2e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|313122594|ref|YP_004044521.1|	-	8.6e-05	22.1	0.0	0.00013	21.5	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HrcA_DNA-bdg	PF03444.10	gi|313122594|ref|YP_004044521.1|	-	0.00041	19.7	0.0	0.00061	19.1	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
MarR	PF01047.17	gi|313122594|ref|YP_004044521.1|	-	0.0014	18.2	0.0	0.0025	17.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|313122594|ref|YP_004044521.1|	-	0.0018	18.0	0.0	0.0036	17.0	0.0	1.5	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
GntR	PF00392.16	gi|313122594|ref|YP_004044521.1|	-	0.0018	17.6	0.1	0.0031	16.9	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_24	PF13412.1	gi|313122594|ref|YP_004044521.1|	-	0.0026	17.0	0.0	0.0041	16.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.1	gi|313122594|ref|YP_004044521.1|	-	0.0031	17.0	0.0	0.013	15.0	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
Sigma70_r4_2	PF08281.7	gi|313122594|ref|YP_004044521.1|	-	0.007	15.8	0.0	0.013	14.9	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Rrf2	PF02082.15	gi|313122594|ref|YP_004044521.1|	-	0.0084	16.2	0.0	0.012	15.7	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_5	PF01022.15	gi|313122594|ref|YP_004044521.1|	-	0.014	15.0	0.0	0.021	14.5	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|313122594|ref|YP_004044521.1|	-	0.015	15.2	0.0	0.027	14.4	0.0	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|313122594|ref|YP_004044521.1|	-	0.018	15.3	0.0	0.031	14.5	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PaaX	PF07848.7	gi|313122594|ref|YP_004044521.1|	-	0.021	14.8	0.0	0.035	14.1	0.0	1.3	1	0	0	1	1	1	0	PaaX-like	protein
HTH_20	PF12840.2	gi|313122594|ref|YP_004044521.1|	-	0.023	14.4	0.1	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|313122594|ref|YP_004044521.1|	-	0.026	14.0	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_11	PF08279.7	gi|313122594|ref|YP_004044521.1|	-	0.15	11.7	0.0	0.25	11.0	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
DUF2309	PF10070.4	gi|313122595|ref|YP_004044522.1|	-	1.9e-251	836.5	0.0	3.4e-251	835.7	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2309)
DUF883	PF05957.8	gi|313122595|ref|YP_004044522.1|	-	3.7	8.0	8.2	1.3	9.5	0.1	3.4	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF883)
Oxidored_q1	PF00361.15	gi|313122596|ref|YP_004044523.1|	-	1.7e-26	93.0	8.3	1.7e-26	93.0	5.7	1.6	2	0	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Tetraspannin	PF00335.15	gi|313122596|ref|YP_004044523.1|	-	6.4	5.9	6.5	1.6	7.9	1.9	2.0	2	0	0	2	2	2	0	Tetraspanin	family
Oxidored_q1_N	PF00662.15	gi|313122597|ref|YP_004044524.1|	-	1e-08	34.6	0.6	1e-08	34.6	0.4	2.0	2	0	0	2	2	2	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
DUF1212	PF06738.7	gi|313122597|ref|YP_004044524.1|	-	0.21	11.0	10.0	0.03	13.7	4.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
Amidohydro_1	PF01979.15	gi|313122599|ref|YP_004044526.1|	-	2.7e-22	79.8	0.0	1.6e-20	74.0	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|313122599|ref|YP_004044526.1|	-	2e-08	34.6	8.4	3e-07	30.7	5.8	2.2	1	1	0	1	1	1	1	Amidohydrolase
A_deaminase	PF00962.17	gi|313122599|ref|YP_004044526.1|	-	2.7e-08	33.1	0.0	3.9e-08	32.5	0.0	1.1	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
Amidohydro_3	PF07969.6	gi|313122599|ref|YP_004044526.1|	-	2.2e-07	30.4	6.9	4.8e-07	29.3	1.2	2.5	1	1	0	2	2	2	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|313122599|ref|YP_004044526.1|	-	1.1e-05	25.1	0.0	2.1e-05	24.2	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
HTH_24	PF13412.1	gi|313122600|ref|YP_004044527.1|	-	4.7e-16	57.9	0.1	7e-16	57.3	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|313122600|ref|YP_004044527.1|	-	6.5e-13	47.9	0.8	1.4e-12	46.9	0.5	1.6	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|313122600|ref|YP_004044527.1|	-	1.1e-07	31.3	0.0	1.9e-07	30.6	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
MarR_2	PF12802.2	gi|313122600|ref|YP_004044527.1|	-	3.4e-06	26.6	0.0	7.8e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|313122600|ref|YP_004044527.1|	-	5.9e-06	26.1	0.1	1.3e-05	25.0	0.0	1.6	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|313122600|ref|YP_004044527.1|	-	6.3e-06	25.6	0.0	1.2e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|313122600|ref|YP_004044527.1|	-	3e-05	23.7	0.0	7e-05	22.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|313122600|ref|YP_004044527.1|	-	4.2e-05	23.5	0.0	0.00014	21.9	0.0	1.7	2	0	0	2	2	2	1	Transcriptional	regulator
Sigma70_r4_2	PF08281.7	gi|313122600|ref|YP_004044527.1|	-	4.7e-05	22.7	0.0	8.5e-05	21.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_DeoR	PF08220.7	gi|313122600|ref|YP_004044527.1|	-	8.7e-05	21.9	0.1	0.0015	18.0	0.0	2.2	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|313122600|ref|YP_004044527.1|	-	0.00021	20.8	0.0	0.00038	20.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|313122600|ref|YP_004044527.1|	-	0.00049	20.3	0.1	0.0054	17.0	0.0	2.1	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|313122600|ref|YP_004044527.1|	-	0.0012	18.7	0.0	0.0024	17.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|313122600|ref|YP_004044527.1|	-	0.0014	18.2	0.0	0.0026	17.3	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR	PF01047.17	gi|313122600|ref|YP_004044527.1|	-	0.0036	16.9	0.0	0.012	15.3	0.0	1.8	2	0	0	2	2	2	1	MarR	family
GntR	PF00392.16	gi|313122600|ref|YP_004044527.1|	-	0.0062	15.9	0.0	0.017	14.5	0.0	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
TrmB	PF01978.14	gi|313122600|ref|YP_004044527.1|	-	0.0076	15.9	0.0	0.018	14.7	0.0	1.6	2	0	0	2	2	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Mga	PF08280.6	gi|313122600|ref|YP_004044527.1|	-	0.011	15.4	0.0	0.016	14.9	0.0	1.3	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_Tnp_ISL3	PF13542.1	gi|313122600|ref|YP_004044527.1|	-	0.011	14.8	0.0	0.027	13.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_12	PF08461.5	gi|313122600|ref|YP_004044527.1|	-	0.019	14.6	0.1	0.064	12.9	0.1	2.0	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_10	PF04967.7	gi|313122600|ref|YP_004044527.1|	-	0.032	13.7	0.1	0.057	13.0	0.0	1.3	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_36	PF13730.1	gi|313122600|ref|YP_004044527.1|	-	0.049	13.7	0.0	0.079	13.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.10	gi|313122600|ref|YP_004044527.1|	-	0.058	12.8	0.0	0.094	12.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
DUF2250	PF10007.4	gi|313122600|ref|YP_004044527.1|	-	0.059	13.2	0.0	0.52	10.2	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_Crp_2	PF13545.1	gi|313122600|ref|YP_004044527.1|	-	0.066	13.0	0.0	0.16	11.7	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_1	PF00126.22	gi|313122600|ref|YP_004044527.1|	-	0.068	12.9	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_29	PF13551.1	gi|313122600|ref|YP_004044527.1|	-	0.097	12.8	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
TFIIE_alpha	PF02002.12	gi|313122600|ref|YP_004044527.1|	-	0.11	11.9	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_38	PF13936.1	gi|313122600|ref|YP_004044527.1|	-	0.13	11.7	0.1	0.29	10.7	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain
Peripla_BP_2	PF01497.13	gi|313122601|ref|YP_004044528.1|	-	6.7e-10	38.4	0.3	1.4e-09	37.4	0.2	1.6	1	1	0	1	1	1	1	Periplasmic	binding	protein
TauE	PF01925.14	gi|313122602|ref|YP_004044529.1|	-	2.1e-38	132.1	39.5	2.5e-38	131.8	27.4	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
CBS	PF00571.23	gi|313122603|ref|YP_004044530.1|	-	2e-10	40.3	2.6	4.4e-06	26.3	0.0	2.7	2	1	0	2	2	2	2	CBS	domain
LTD	PF00932.14	gi|313122605|ref|YP_004044532.1|	-	0.015	15.4	0.0	0.025	14.6	0.0	1.3	1	0	0	1	1	1	0	Lamin	Tail	Domain
Halogen_Hydrol	PF10112.4	gi|313122605|ref|YP_004044532.1|	-	0.38	10.1	4.6	0.1	11.9	0.2	2.1	2	0	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
TctB	PF07331.6	gi|313122605|ref|YP_004044532.1|	-	0.4	10.3	18.4	1.1	8.8	2.9	2.5	2	1	0	2	2	2	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF4131	PF13567.1	gi|313122605|ref|YP_004044532.1|	-	0.58	9.5	11.6	4.1	6.7	3.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4131)
DUF4418	PF14387.1	gi|313122605|ref|YP_004044532.1|	-	2.7	7.7	6.3	1.9	8.2	2.7	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4418)
LysM	PF01476.15	gi|313122607|ref|YP_004044534.1|	-	2.4e-09	36.9	0.0	6.3e-09	35.5	0.0	1.8	1	0	0	1	1	1	1	LysM	domain
Phage_GPD	PF05954.6	gi|313122608|ref|YP_004044535.1|	-	1.3e-21	77.1	0.3	1.5e-21	76.8	0.2	1.1	1	0	0	1	1	1	1	Phage	late	control	gene	D	protein	(GPD)
Phage-tail_3	PF13550.1	gi|313122608|ref|YP_004044535.1|	-	0.04	13.6	0.0	0.089	12.5	0.0	1.7	2	0	0	2	2	2	0	Putative	phage	tail	protein
Phage_base_V	PF04717.7	gi|313122609|ref|YP_004044536.1|	-	1.1e-20	73.3	0.0	2.5e-20	72.1	0.0	1.6	1	0	0	1	1	1	1	Phage-related	baseplate	assembly	protein
DUF2345	PF10106.4	gi|313122609|ref|YP_004044536.1|	-	0.0015	18.1	2.2	0.0015	18.1	1.5	1.7	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
DUF3540	PF12059.3	gi|313122609|ref|YP_004044536.1|	-	0.002	17.8	0.1	1.5	8.3	0.0	2.9	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF3540)
Sarcoglycan_1	PF04790.8	gi|313122609|ref|YP_004044536.1|	-	0.0035	16.5	6.9	0.029	13.5	0.5	2.7	1	1	2	3	3	3	2	Sarcoglycan	complex	subunit	protein
Pilus_CpaD	PF09476.5	gi|313122609|ref|YP_004044536.1|	-	0.048	13.1	0.2	0.072	12.5	0.2	1.3	1	0	0	1	1	1	0	Pilus	biogenesis	CpaD	protein	(pilus_cpaD)
YabP	PF07873.6	gi|313122609|ref|YP_004044536.1|	-	0.12	11.8	0.7	0.6	9.7	0.3	2.3	2	1	0	2	2	2	0	YabP	family
PAAR_motif	PF05488.8	gi|313122610|ref|YP_004044537.1|	-	2.9e-25	88.0	11.0	6.4e-14	51.6	0.8	3.0	1	1	2	3	3	3	3	PAAR	motif
DUF4150	PF13665.1	gi|313122610|ref|YP_004044537.1|	-	9.8e-06	25.4	0.0	0.028	14.3	0.0	2.7	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF4150)
D-aminoacyl_C	PF07908.7	gi|313122610|ref|YP_004044537.1|	-	0.0013	17.9	0.4	0.58	9.5	0.0	2.3	2	0	0	2	2	2	2	D-aminoacylase,	C-terminal	region
GPW_gp25	PF04965.9	gi|313122611|ref|YP_004044538.1|	-	1.4e-21	75.9	0.1	1.6e-21	75.6	0.1	1.0	1	0	0	1	1	1	1	Gene	25-like	lysozyme
Baseplate_J	PF04865.9	gi|313122612|ref|YP_004044539.1|	-	1.6e-16	60.4	0.5	6.4e-15	55.1	0.2	2.3	2	0	0	2	2	2	2	Baseplate	J-like	protein
Baseplate_J	PF04865.9	gi|313122613|ref|YP_004044540.1|	-	3.7e-16	59.1	3.9	1.4e-13	50.8	1.9	2.3	2	0	0	2	2	2	2	Baseplate	J-like	protein
Tail_P2_I	PF09684.5	gi|313122614|ref|YP_004044541.1|	-	2.8e-05	23.7	0.0	5.9e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	Phage	tail	protein	(Tail_P2_I)
HHH_5	PF14520.1	gi|313122614|ref|YP_004044541.1|	-	0.021	14.9	0.0	0.052	13.7	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
Tachylectin	PF14517.1	gi|313122614|ref|YP_004044541.1|	-	0.11	11.8	0.0	0.3	10.3	0.0	1.7	2	0	0	2	2	2	0	Tachylectin
PQQ_3	PF13570.1	gi|313122614|ref|YP_004044541.1|	-	0.26	11.6	12.4	2.7	8.3	0.5	5.4	5	1	1	6	6	6	0	PQQ-like	domain
DUF4157	PF13699.1	gi|313122615|ref|YP_004044542.1|	-	2.5e-29	101.2	4.5	4.7e-29	100.3	1.9	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4157)
Peptidase_MA_2	PF13485.1	gi|313122615|ref|YP_004044542.1|	-	0.2	11.7	1.8	1.8	8.6	0.1	2.6	3	0	0	3	3	3	0	Peptidase	MA	superfamily
Atg14	PF10186.4	gi|313122615|ref|YP_004044542.1|	-	0.37	9.6	4.8	0.83	8.5	3.3	1.5	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
IncA	PF04156.9	gi|313122615|ref|YP_004044542.1|	-	0.37	10.3	6.7	0.78	9.3	4.6	1.5	1	0	0	1	1	1	0	IncA	protein
ApoL	PF05461.6	gi|313122615|ref|YP_004044542.1|	-	5.3	6.2	8.9	6	6.0	3.3	2.4	3	0	0	3	3	3	0	Apolipoprotein	L
DUF4157	PF13699.1	gi|313122617|ref|YP_004044544.1|	-	1.8e-17	63.2	1.7	4.3e-17	62.0	1.1	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4157)
RD3	PF14473.1	gi|313122617|ref|YP_004044544.1|	-	0.063	12.7	0.1	0.19	11.2	0.1	1.8	2	0	0	2	2	2	0	RD3	protein
KCNQ_channel	PF03520.9	gi|313122617|ref|YP_004044544.1|	-	0.066	12.5	0.0	0.16	11.2	0.0	1.6	1	0	0	1	1	1	0	KCNQ	voltage-gated	potassium	channel
M16C_assoc	PF08367.6	gi|313122617|ref|YP_004044544.1|	-	0.089	11.6	4.8	0.18	10.6	3.4	1.5	1	0	0	1	1	1	0	Peptidase	M16C	associated
RHH_1	PF01402.16	gi|313122617|ref|YP_004044544.1|	-	1.1	9.2	0.0	1.1	9.2	0.0	3.1	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Mst1_SARAH	PF11629.3	gi|313122617|ref|YP_004044544.1|	-	5.1	6.9	7.5	1	9.2	0.8	2.5	2	0	0	2	2	2	0	C	terminal	SARAH	domain	of	Mst1
Dict-STAT-coil	PF09267.5	gi|313122619|ref|YP_004044546.1|	-	0.069	13.3	3.3	0.073	13.2	0.5	2.0	2	0	0	2	2	2	0	Dictyostelium	STAT,	coiled	coil
GvpL_GvpF	PF06386.6	gi|313122619|ref|YP_004044546.1|	-	0.33	10.5	8.9	0.54	9.8	0.7	2.6	1	1	1	2	2	2	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
CCDC-167	PF15188.1	gi|313122619|ref|YP_004044546.1|	-	0.54	10.2	3.5	1.1	9.3	0.7	2.7	2	1	0	2	2	2	0	Coiled-coil	domain-containing	protein	167
DUF4157	PF13699.1	gi|313122621|ref|YP_004044548.1|	-	1.2e-05	25.3	1.5	1.9e-05	24.7	1.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4157)
Peptidase_M91	PF14891.1	gi|313122621|ref|YP_004044548.1|	-	0.097	12.7	0.2	0.1	12.6	0.2	1.1	1	0	0	1	1	1	0	Effector	protein
ArsA_ATPase	PF02374.10	gi|313122622|ref|YP_004044549.1|	-	6e-71	238.9	0.0	6.7e-71	238.8	0.0	1.0	1	0	0	1	1	1	1	Anion-transporting	ATPase
CbiA	PF01656.18	gi|313122622|ref|YP_004044549.1|	-	7.2e-10	38.5	0.0	6.5e-08	32.2	0.0	2.1	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|313122622|ref|YP_004044549.1|	-	7.3e-06	25.9	0.0	2.1e-05	24.5	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|313122622|ref|YP_004044549.1|	-	0.0097	15.3	3.5	0.033	13.5	1.2	2.6	1	1	1	2	2	2	1	AAA	domain
ParA	PF10609.4	gi|313122622|ref|YP_004044549.1|	-	0.018	14.9	0.0	0.046	13.5	0.0	1.7	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
YhjQ	PF06564.7	gi|313122622|ref|YP_004044549.1|	-	0.027	13.8	0.0	0.044	13.1	0.0	1.3	1	0	0	1	1	1	0	YhjQ	protein
PhoH	PF02562.11	gi|313122622|ref|YP_004044549.1|	-	0.036	13.3	0.0	0.062	12.5	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_16	PF13191.1	gi|313122622|ref|YP_004044549.1|	-	0.05	13.5	0.2	0.11	12.4	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
Fer4_NifH	PF00142.13	gi|313122622|ref|YP_004044549.1|	-	0.093	11.8	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
SRP54	PF00448.17	gi|313122622|ref|YP_004044549.1|	-	0.13	11.6	0.0	0.28	10.5	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_33	PF13671.1	gi|313122622|ref|YP_004044549.1|	-	1.2	9.0	3.7	33	4.3	2.6	3.0	1	1	0	1	1	1	0	AAA	domain
Rab5-bind	PF09311.6	gi|313122624|ref|YP_004044551.1|	-	0.11	12.3	4.6	4.3	7.1	3.2	2.5	1	1	0	1	1	1	0	Rabaptin-like	protein
Pro-kuma_activ	PF09286.6	gi|313122624|ref|YP_004044551.1|	-	0.11	12.5	0.0	43	4.1	0.0	3.5	4	0	0	4	4	4	0	Pro-kumamolisin,	activation	domain
TBPIP	PF07106.8	gi|313122624|ref|YP_004044551.1|	-	0.2	11.2	2.1	0.19	11.2	0.4	1.7	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NPV_P10	PF05531.7	gi|313122624|ref|YP_004044551.1|	-	0.28	11.4	3.6	22	5.3	2.5	3.2	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
FliJ	PF02050.11	gi|313122624|ref|YP_004044551.1|	-	0.31	11.1	5.5	0.28	11.2	1.2	2.6	3	0	0	3	3	3	0	Flagellar	FliJ	protein
Phage_sheath_1	PF04984.9	gi|313122625|ref|YP_004044552.1|	-	2.4e-77	260.3	0.0	2e-76	257.3	0.0	1.9	1	1	0	1	1	1	1	Phage	tail	sheath	protein
Phage_T4_gp19	PF06841.7	gi|313122626|ref|YP_004044553.1|	-	2e-21	76.0	0.0	2.2e-21	75.8	0.0	1.0	1	0	0	1	1	1	1	T4-like	virus	tail	tube	protein	gp19
Nbs1_C	PF08599.5	gi|313122626|ref|YP_004044553.1|	-	0.077	12.9	0.2	0.15	11.9	0.2	1.4	1	0	0	1	1	1	0	DNA	damage	repair	protein	Nbs1
FYDLN_acid	PF09538.5	gi|313122628|ref|YP_004044555.1|	-	0.064	13.8	2.3	0.096	13.2	1.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
Phage_T4_gp19	PF06841.7	gi|313122630|ref|YP_004044557.1|	-	2.8e-35	120.8	0.1	3.2e-35	120.6	0.0	1.0	1	0	0	1	1	1	1	T4-like	virus	tail	tube	protein	gp19
DUF4255	PF14065.1	gi|313122631|ref|YP_004044558.1|	-	1e-28	99.9	0.0	1.2e-28	99.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4255)
AAA	PF00004.24	gi|313122632|ref|YP_004044559.1|	-	3e-30	105.1	0.0	1.2e-28	99.9	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|313122632|ref|YP_004044559.1|	-	3.6e-05	24.5	0.1	0.00089	20.0	0.0	3.2	3	2	1	4	4	3	1	AAA	domain
Zot	PF05707.7	gi|313122632|ref|YP_004044559.1|	-	0.00023	20.6	0.5	0.0037	16.7	0.4	2.2	1	1	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_22	PF13401.1	gi|313122632|ref|YP_004044559.1|	-	0.00089	19.3	1.9	0.056	13.5	0.3	3.2	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|313122632|ref|YP_004044559.1|	-	0.0016	18.2	0.0	0.076	12.8	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
AAA_2	PF07724.9	gi|313122632|ref|YP_004044559.1|	-	0.0019	18.1	0.1	0.0036	17.2	0.1	1.5	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.8	gi|313122632|ref|YP_004044559.1|	-	0.0029	16.4	0.0	0.0062	15.3	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
Cytidylate_kin2	PF13189.1	gi|313122632|ref|YP_004044559.1|	-	0.0046	16.8	0.1	0.0098	15.8	0.1	1.5	1	0	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|313122632|ref|YP_004044559.1|	-	0.0068	16.7	0.0	0.024	14.9	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|313122632|ref|YP_004044559.1|	-	0.012	15.4	0.0	0.026	14.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|313122632|ref|YP_004044559.1|	-	0.017	15.2	0.0	0.13	12.4	0.0	2.4	3	0	0	3	3	3	0	RNA	helicase
Sigma54_activ_2	PF14532.1	gi|313122632|ref|YP_004044559.1|	-	0.027	14.5	0.0	12	5.9	0.0	2.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|313122632|ref|YP_004044559.1|	-	0.075	12.6	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4157	PF13699.1	gi|313122633|ref|YP_004044560.1|	-	2.8e-30	104.2	1.4	1.1e-29	102.4	1.0	2.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4157)
DUF3899	PF13038.1	gi|313122633|ref|YP_004044560.1|	-	2.5	8.3	4.1	0.74	10.0	0.3	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3899)
Plug	PF07715.10	gi|313122634|ref|YP_004044561.1|	-	0.0076	16.5	0.0	0.011	15.9	0.0	1.2	1	0	0	1	1	1	1	TonB-dependent	Receptor	Plug	Domain
Laminin_I	PF06008.9	gi|313122635|ref|YP_004044562.1|	-	0.0017	17.7	5.0	0.0032	16.8	3.5	1.4	1	0	0	1	1	1	1	Laminin	Domain	I
TBPIP	PF07106.8	gi|313122635|ref|YP_004044562.1|	-	0.0047	16.4	4.9	0.0091	15.5	3.4	1.5	1	0	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
IncA	PF04156.9	gi|313122635|ref|YP_004044562.1|	-	0.0047	16.5	2.4	0.0094	15.5	1.7	1.5	1	0	0	1	1	1	1	IncA	protein
HOOK	PF05622.7	gi|313122635|ref|YP_004044562.1|	-	0.01	13.6	6.9	0.015	13.1	4.8	1.1	1	0	0	1	1	1	0	HOOK	protein
Bacillus_HBL	PF05791.6	gi|313122635|ref|YP_004044562.1|	-	0.011	15.1	5.1	0.019	14.3	3.5	1.3	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
Fmp27_WPPW	PF10359.4	gi|313122635|ref|YP_004044562.1|	-	0.014	13.8	6.0	0.024	13.0	4.2	1.3	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
DUF1664	PF07889.7	gi|313122635|ref|YP_004044562.1|	-	0.025	14.3	2.4	0.053	13.3	1.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Vac_Fusion	PF02346.11	gi|313122635|ref|YP_004044562.1|	-	0.054	12.9	2.2	1.2	8.5	0.1	2.6	1	1	1	2	2	2	0	Chordopoxvirus	fusion	protein
DUF812	PF05667.6	gi|313122635|ref|YP_004044562.1|	-	0.057	11.9	4.7	0.076	11.5	3.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
COG2	PF06148.6	gi|313122635|ref|YP_004044562.1|	-	0.057	13.2	2.1	0.11	12.3	1.5	1.5	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
XhlA	PF10779.4	gi|313122635|ref|YP_004044562.1|	-	0.068	13.0	16.6	2	8.3	3.7	3.4	2	1	1	3	3	3	0	Haemolysin	XhlA
Occludin_ELL	PF07303.8	gi|313122635|ref|YP_004044562.1|	-	0.082	13.6	1.4	0.16	12.6	1.0	1.5	1	0	0	1	1	1	0	Occludin	homology	domain
V_ATPase_I	PF01496.14	gi|313122635|ref|YP_004044562.1|	-	0.088	10.6	2.9	0.12	10.1	2.0	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Cauli_AT	PF03233.8	gi|313122635|ref|YP_004044562.1|	-	0.09	12.4	2.5	0.16	11.6	1.7	1.4	1	0	0	1	1	1	0	Aphid	transmission	protein
PP_kinase_N	PF13089.1	gi|313122635|ref|YP_004044562.1|	-	0.19	11.8	1.8	0.39	10.8	1.2	1.5	1	0	0	1	1	1	0	Polyphosphate	kinase	N-terminal	domain
TMPIT	PF07851.8	gi|313122635|ref|YP_004044562.1|	-	0.21	10.5	1.6	0.3	10.0	1.1	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
GLE1	PF07817.8	gi|313122635|ref|YP_004044562.1|	-	0.27	10.1	2.2	0.41	9.5	1.5	1.2	1	0	0	1	1	1	0	GLE1-like	protein
Phage_GPO	PF05929.6	gi|313122635|ref|YP_004044562.1|	-	0.29	10.3	6.9	0.097	11.9	2.5	1.7	2	0	0	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
COG5	PF10392.4	gi|313122635|ref|YP_004044562.1|	-	0.34	10.8	4.2	0.68	9.8	2.9	1.5	1	0	0	1	1	1	0	Golgi	transport	complex	subunit	5
SlyX	PF04102.7	gi|313122635|ref|YP_004044562.1|	-	0.35	11.2	7.7	3.2	8.1	0.4	2.6	1	1	1	2	2	2	0	SlyX
TMF_DNA_bd	PF12329.3	gi|313122635|ref|YP_004044562.1|	-	0.78	9.5	17.2	1.8	8.4	4.3	2.5	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF2580	PF10824.3	gi|313122635|ref|YP_004044562.1|	-	1	9.7	8.8	3.2	8.1	0.9	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2580)
DUF607	PF04678.8	gi|313122635|ref|YP_004044562.1|	-	1	9.2	4.1	20	5.0	2.9	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF607
FemAB	PF02388.11	gi|313122635|ref|YP_004044562.1|	-	1.1	7.9	5.0	1.6	7.3	3.4	1.2	1	0	0	1	1	1	0	FemAB	family
NPV_P10	PF05531.7	gi|313122635|ref|YP_004044562.1|	-	1.1	9.5	5.5	1.7	8.9	2.7	2.1	2	1	0	2	2	1	0	Nucleopolyhedrovirus	P10	protein
MIF4G_like_2	PF09090.6	gi|313122635|ref|YP_004044562.1|	-	1.2	8.2	7.0	0.47	9.6	2.7	1.7	2	0	0	2	2	2	0	MIF4G	like
DUF4407	PF14362.1	gi|313122635|ref|YP_004044562.1|	-	2.1	7.2	11.6	2.4	7.0	7.4	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF1840	PF08895.6	gi|313122635|ref|YP_004044562.1|	-	2.2	8.3	6.5	1.6	8.7	2.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1840)
DUF948	PF06103.6	gi|313122635|ref|YP_004044562.1|	-	2.4	8.0	5.1	7.3	6.5	3.6	1.8	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF3552	PF12072.3	gi|313122635|ref|YP_004044562.1|	-	3.5	6.7	12.6	6.9	5.8	8.7	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
Sugarporin_N	PF11471.3	gi|313122635|ref|YP_004044562.1|	-	3.7	7.2	9.1	0.58	9.8	2.4	2.4	1	1	1	2	2	2	0	Maltoporin	periplasmic	N-terminal	extension
UPF0449	PF15136.1	gi|313122635|ref|YP_004044562.1|	-	4	7.6	6.7	4.8	7.4	2.1	2.3	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
BTV_NS2	PF04514.7	gi|313122635|ref|YP_004044562.1|	-	6.8	5.4	10.0	0.5	9.2	2.9	1.8	2	0	0	2	2	2	0	Bluetongue	virus	non-structural	protein	NS2
Packaging_FI	PF14000.1	gi|313122635|ref|YP_004044562.1|	-	8.7	6.5	12.5	0.44	10.7	3.6	2.4	2	0	0	2	2	2	0	DNA	packaging	protein	FI
ABC_tran	PF00005.22	gi|313122639|ref|YP_004044566.1|	-	2.5e-23	82.8	0.0	4.1e-23	82.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|313122639|ref|YP_004044566.1|	-	7.7e-11	42.4	0.0	5.8e-07	29.7	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|313122639|ref|YP_004044566.1|	-	0.0017	17.8	0.1	0.044	13.2	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
MobB	PF03205.9	gi|313122639|ref|YP_004044566.1|	-	0.0027	17.3	0.0	0.01	15.5	0.0	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|313122639|ref|YP_004044566.1|	-	0.0051	16.4	0.0	0.21	11.1	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
DUF4162	PF13732.1	gi|313122639|ref|YP_004044566.1|	-	0.0059	17.0	0.0	0.011	16.1	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
SRP54	PF00448.17	gi|313122639|ref|YP_004044566.1|	-	0.0079	15.6	0.0	0.013	14.9	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|313122639|ref|YP_004044566.1|	-	0.0097	14.7	0.0	0.015	14.0	0.0	1.2	1	0	0	1	1	1	1	ArgK	protein
AAA_29	PF13555.1	gi|313122639|ref|YP_004044566.1|	-	0.012	15.1	0.0	0.021	14.3	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|313122639|ref|YP_004044566.1|	-	0.077	13.3	0.0	0.081	13.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|313122639|ref|YP_004044566.1|	-	0.11	12.0	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
SMC_N	PF02463.14	gi|313122639|ref|YP_004044566.1|	-	0.13	11.4	0.0	7.2	5.7	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
ABC2_membrane_2	PF12679.2	gi|313122640|ref|YP_004044567.1|	-	9.2e-17	60.7	16.4	1.2e-16	60.3	11.3	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|313122640|ref|YP_004044567.1|	-	1.8e-07	30.6	26.0	3.1e-07	29.8	18.0	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|313122640|ref|YP_004044567.1|	-	0.00028	20.0	17.2	0.00038	19.6	11.9	1.4	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|313122640|ref|YP_004044567.1|	-	0.0032	16.7	14.5	0.0032	16.7	10.1	1.8	3	0	0	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|313122641|ref|YP_004044568.1|	-	2e-16	59.7	14.4	2.6e-16	59.2	10.0	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|313122641|ref|YP_004044568.1|	-	6.1e-13	48.4	18.4	7.2e-13	48.2	12.8	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|313122641|ref|YP_004044568.1|	-	7.3e-06	25.4	3.9	1.2e-05	24.7	2.7	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
Peptidase_S8	PF00082.17	gi|313122643|ref|YP_004044570.1|	-	6.2e-20	71.4	0.0	8.1e-20	71.1	0.0	1.1	1	0	0	1	1	1	1	Subtilase	family
HNF-1_N	PF04814.8	gi|313122644|ref|YP_004044571.1|	-	0.13	12.3	0.0	0.23	11.5	0.0	1.3	1	0	0	1	1	1	0	Hepatocyte	nuclear	factor	1	(HNF-1),	N	terminus
DDE_Tnp_1	PF01609.16	gi|313122645|ref|YP_004044572.1|	-	2.7e-10	40.1	2.5	5.5e-10	39.1	1.8	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|313122645|ref|YP_004044572.1|	-	0.00043	20.4	1.4	0.001	19.1	1.0	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|313122645|ref|YP_004044572.1|	-	0.00061	19.5	0.0	0.00073	19.3	0.0	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|313122645|ref|YP_004044572.1|	-	0.0028	17.6	0.2	0.0032	17.4	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
GDE_N	PF12439.3	gi|313122645|ref|YP_004044572.1|	-	0.13	11.4	0.3	0.17	11.1	0.2	1.1	1	0	0	1	1	1	0	Glycogen	debranching	enzyme	N	terminal
Prominin	PF05478.6	gi|313122646|ref|YP_004044573.1|	-	0.039	11.4	2.5	0.038	11.5	1.7	1.0	1	0	0	1	1	1	0	Prominin
YtpI	PF14007.1	gi|313122646|ref|YP_004044573.1|	-	0.061	13.2	5.8	0.15	11.9	3.8	1.8	1	1	1	2	2	2	0	YtpI-like	protein
MFS_1	PF07690.11	gi|313122646|ref|YP_004044573.1|	-	0.11	11.1	6.9	0.14	10.8	4.8	1.1	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
OCIA	PF07051.6	gi|313122646|ref|YP_004044573.1|	-	0.2	11.0	0.7	0.25	10.7	0.2	1.4	1	1	0	1	1	1	0	Ovarian	carcinoma	immunoreactive	antigen	(OCIA)
Choline_transpo	PF04515.7	gi|313122646|ref|YP_004044573.1|	-	0.23	10.1	4.4	0.26	10.0	3.0	1.0	1	0	0	1	1	1	0	Plasma-membrane	choline	transporter
DUF1201	PF06716.6	gi|313122646|ref|YP_004044573.1|	-	0.39	10.5	0.1	0.39	10.5	0.1	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1201)
Orai-1	PF07856.7	gi|313122646|ref|YP_004044573.1|	-	0.52	9.8	3.8	0.62	9.5	2.7	1.3	1	1	0	1	1	1	0	Mediator	of	CRAC	channel	activity
DsbD_2	PF13386.1	gi|313122646|ref|YP_004044573.1|	-	1	9.0	6.6	0.52	10.0	0.6	2.0	1	1	1	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
DUF1700	PF08006.6	gi|313122646|ref|YP_004044573.1|	-	1.4	8.2	4.7	2.1	7.6	3.3	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF3040	PF11239.3	gi|313122646|ref|YP_004044573.1|	-	2	8.5	6.6	2.1	8.4	4.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
FixQ	PF05545.6	gi|313122646|ref|YP_004044573.1|	-	6.3	6.5	7.6	0.73	9.5	0.3	2.3	2	1	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
ABC2_membrane_2	PF12679.2	gi|313122647|ref|YP_004044574.1|	-	5.9e-30	104.0	34.6	1.8e-16	59.8	8.3	3.1	2	1	0	2	2	2	2	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|313122647|ref|YP_004044574.1|	-	5.7e-12	45.2	39.4	1.1e-07	31.2	8.7	3.3	2	2	1	3	3	3	2	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|313122647|ref|YP_004044574.1|	-	3.1e-10	39.6	40.9	9.3e-07	28.1	8.8	2.4	2	0	0	2	2	2	2	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|313122648|ref|YP_004044575.1|	-	1.8e-25	89.8	0.0	2.7e-25	89.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|313122648|ref|YP_004044575.1|	-	2e-12	47.6	0.0	6.6e-08	32.8	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|313122648|ref|YP_004044575.1|	-	0.002	17.6	0.0	0.0041	16.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|313122648|ref|YP_004044575.1|	-	0.014	15.7	0.0	0.022	15.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
DUF4162	PF13732.1	gi|313122648|ref|YP_004044575.1|	-	0.02	15.4	0.0	0.038	14.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4162)
ArgK	PF03308.11	gi|313122648|ref|YP_004044575.1|	-	0.035	12.8	0.0	0.056	12.2	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_10	PF12846.2	gi|313122648|ref|YP_004044575.1|	-	0.049	13.0	0.0	0.36	10.2	0.0	1.9	1	1	1	2	2	2	0	AAA-like	domain
Transcrip_reg	PF01709.15	gi|313122648|ref|YP_004044575.1|	-	0.057	12.5	0.0	0.086	11.9	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
BCA_ABC_TP_C	PF12399.3	gi|313122648|ref|YP_004044575.1|	-	0.065	12.9	0.2	0.57	9.9	0.0	2.3	2	0	0	2	2	2	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
SbcCD_C	PF13558.1	gi|313122648|ref|YP_004044575.1|	-	0.07	13.0	0.0	0.17	11.8	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
SMC_N	PF02463.14	gi|313122648|ref|YP_004044575.1|	-	0.072	12.3	0.0	2.7	7.1	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
SRP54	PF00448.17	gi|313122648|ref|YP_004044575.1|	-	0.08	12.3	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
DUF258	PF03193.11	gi|313122648|ref|YP_004044575.1|	-	0.15	11.2	0.0	0.26	10.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DDE_Tnp_1	PF01609.16	gi|313122651|ref|YP_004044578.1|	-	2.6e-05	23.8	0.0	2.7e-05	23.7	0.0	1.0	1	0	0	1	1	1	1	Transposase	DDE	domain
Na_K-ATPase	PF00287.13	gi|313122651|ref|YP_004044578.1|	-	0.034	12.9	0.0	0.038	12.7	0.0	1.1	1	0	0	1	1	1	0	Sodium	/	potassium	ATPase	beta	chain
CbiA	PF01656.18	gi|313122652|ref|YP_004044579.1|	-	1.5e-19	70.1	0.0	2e-19	69.7	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|313122652|ref|YP_004044579.1|	-	6.4e-06	26.1	0.1	2e-05	24.5	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
MipZ	PF09140.6	gi|313122652|ref|YP_004044579.1|	-	4.5e-05	22.6	0.0	0.00053	19.1	0.0	2.2	2	0	0	2	2	2	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|313122652|ref|YP_004044579.1|	-	0.00029	19.9	0.0	0.00049	19.2	0.0	1.5	1	0	0	1	1	1	1	Anion-transporting	ATPase
YhjQ	PF06564.7	gi|313122652|ref|YP_004044579.1|	-	0.0054	16.1	0.0	0.014	14.7	0.0	1.7	2	0	0	2	2	2	1	YhjQ	protein
Fer4_NifH	PF00142.13	gi|313122652|ref|YP_004044579.1|	-	0.13	11.4	0.0	0.22	10.6	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
XAP5	PF04921.9	gi|313122653|ref|YP_004044580.1|	-	0.24	10.9	3.6	0.32	10.5	2.5	1.3	1	0	0	1	1	1	0	XAP5,	circadian	clock	regulator
YqfQ	PF14181.1	gi|313122653|ref|YP_004044580.1|	-	4.2	7.3	6.9	7	6.6	4.8	1.3	1	0	0	1	1	1	0	YqfQ-like	protein
FUSC_2	PF13515.1	gi|313122654|ref|YP_004044581.1|	-	0.02	14.8	5.7	0.03	14.2	4.0	1.4	1	1	0	1	1	1	0	Fusaric	acid	resistance	protein-like
Bax1-I	PF01027.15	gi|313122654|ref|YP_004044581.1|	-	0.047	13.2	3.9	0.056	13.0	2.7	1.1	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
UPF0220	PF05255.6	gi|313122654|ref|YP_004044581.1|	-	0.11	11.6	1.3	3.5	6.8	0.1	2.2	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0220)
PRA1	PF03208.14	gi|313122654|ref|YP_004044581.1|	-	0.18	11.1	1.6	0.25	10.6	1.1	1.3	1	0	0	1	1	1	0	PRA1	family	protein
DUF1109	PF06532.6	gi|313122654|ref|YP_004044581.1|	-	0.45	9.8	7.2	0.13	11.6	0.7	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1109)
DUF202	PF02656.10	gi|313122654|ref|YP_004044581.1|	-	1.1	9.4	12.7	24	5.2	8.8	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
DUF4234	PF14018.1	gi|313122654|ref|YP_004044581.1|	-	3.9	7.2	5.5	1	9.1	0.5	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4234)
DUF4131	PF13567.1	gi|313122654|ref|YP_004044581.1|	-	5	6.4	10.2	0.87	8.9	4.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Rick_17kDa_Anti	PF05433.10	gi|313122655|ref|YP_004044582.1|	-	0.044	13.4	12.1	0.12	12.0	8.4	1.7	1	0	0	1	1	1	0	Glycine	zipper	2TM	domain
Gly-zipper_Omp	PF13488.1	gi|313122655|ref|YP_004044582.1|	-	0.093	12.3	10.7	0.27	10.9	7.4	1.8	1	0	0	1	1	1	0	Glycine	zipper
OPT	PF03169.10	gi|313122657|ref|YP_004044584.1|	-	0.1	10.9	1.2	0.12	10.7	0.9	1.0	1	0	0	1	1	1	0	OPT	oligopeptide	transporter	protein
Tmemb_cc2	PF10267.4	gi|313122657|ref|YP_004044584.1|	-	0.12	10.9	1.4	0.14	10.7	1.0	1.0	1	0	0	1	1	1	0	Predicted	transmembrane	and	coiled-coil	2	protein
Gpi16	PF04113.9	gi|313122658|ref|YP_004044585.1|	-	0.081	10.9	1.9	0.082	10.9	1.3	1.0	1	0	0	1	1	1	0	Gpi16	subunit,	GPI	transamidase	component
MARVEL	PF01284.18	gi|313122658|ref|YP_004044585.1|	-	0.098	12.4	1.3	0.11	12.3	0.9	1.0	1	0	0	1	1	1	0	Membrane-associating	domain
DoxX	PF07681.7	gi|313122659|ref|YP_004044586.1|	-	4.9e-11	42.9	11.0	4.9e-11	42.9	7.7	1.7	2	0	0	2	2	2	1	DoxX
HR_lesion	PF05514.6	gi|313122659|ref|YP_004044586.1|	-	0.00093	19.0	1.5	0.001	18.9	0.3	1.6	1	1	1	2	2	2	1	HR-like	lesion-inducing
Fe-ADH	PF00465.14	gi|313122660|ref|YP_004044587.1|	-	1.2e-60	205.1	0.8	1.3e-60	204.9	0.6	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|313122660|ref|YP_004044587.1|	-	7.1e-13	48.4	0.1	4.2e-08	32.8	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
MR_MLE_C	PF13378.1	gi|313122661|ref|YP_004044588.1|	-	0.0059	16.5	0.0	0.013	15.4	0.0	1.5	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.6	gi|313122661|ref|YP_004044588.1|	-	0.15	10.9	0.0	0.25	10.2	0.0	1.3	1	0	0	1	1	1	0	Methylaspartate	ammonia-lyase	C-terminus
Isochorismatase	PF00857.15	gi|313122662|ref|YP_004044589.1|	-	9e-30	103.8	0.2	2e-29	102.7	0.1	1.6	1	1	0	1	1	1	1	Isochorismatase	family
TK	PF00265.13	gi|313122662|ref|YP_004044589.1|	-	0.064	12.8	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	Thymidine	kinase
Fer4_19	PF06902.6	gi|313122663|ref|YP_004044590.1|	-	3.4e-24	84.4	0.0	6.7e-24	83.4	0.0	1.5	1	0	0	1	1	1	1	Divergent	4Fe-4S	mono-cluster
zf-CDGSH	PF09360.5	gi|313122663|ref|YP_004044590.1|	-	6.4e-23	80.3	3.0	1e-11	44.4	0.0	2.5	2	0	0	2	2	2	2	Iron-binding	zinc	finger	CDGSH	type
Fer4_15	PF13459.1	gi|313122663|ref|YP_004044590.1|	-	0.035	14.6	0.3	0.13	12.8	0.2	2.0	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_6	PF12837.2	gi|313122663|ref|YP_004044590.1|	-	1.9	8.5	5.3	1.1	9.2	0.2	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Isochorismatase	PF00857.15	gi|313122664|ref|YP_004044591.1|	-	2e-25	89.7	0.0	3.3e-25	89.0	0.0	1.4	1	0	0	1	1	1	1	Isochorismatase	family
HxlR	PF01638.12	gi|313122665|ref|YP_004044592.1|	-	1.5e-20	72.5	0.0	1.9e-20	72.2	0.0	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|313122665|ref|YP_004044592.1|	-	8.5e-07	29.2	0.1	1.3e-06	28.5	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|313122665|ref|YP_004044592.1|	-	3.2e-05	23.8	0.0	4.5e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|313122665|ref|YP_004044592.1|	-	5.7e-05	22.7	0.1	8.4e-05	22.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|313122665|ref|YP_004044592.1|	-	0.0061	16.2	0.2	0.011	15.4	0.0	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|313122665|ref|YP_004044592.1|	-	0.0077	15.9	0.0	0.012	15.3	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|313122665|ref|YP_004044592.1|	-	0.019	14.6	0.1	0.032	13.9	0.1	1.5	1	1	0	1	1	1	0	MarR	family
HTH_5	PF01022.15	gi|313122665|ref|YP_004044592.1|	-	0.026	14.1	0.0	0.045	13.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
FeoC	PF09012.5	gi|313122665|ref|YP_004044592.1|	-	0.062	13.0	0.0	0.089	12.5	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Replic_Relax	PF13814.1	gi|313122665|ref|YP_004044592.1|	-	0.073	12.9	0.0	0.1	12.4	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
Trp_repressor	PF01371.14	gi|313122665|ref|YP_004044592.1|	-	0.084	12.7	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Trp	repressor	protein
HTH_11	PF08279.7	gi|313122665|ref|YP_004044592.1|	-	0.14	11.8	0.0	0.22	11.1	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
Glyoxalase	PF00903.20	gi|313122666|ref|YP_004044593.1|	-	1.4e-11	44.5	0.4	1.8e-11	44.1	0.3	1.2	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_4	PF13669.1	gi|313122666|ref|YP_004044593.1|	-	1.3e-08	34.8	0.0	2.2e-08	34.0	0.0	1.4	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|313122666|ref|YP_004044593.1|	-	7.6e-06	26.4	0.0	1.4e-05	25.6	0.0	1.5	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|313122667|ref|YP_004044594.1|	-	1.3e-32	112.4	1.3	1.3e-17	63.9	0.0	2.1	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|313122667|ref|YP_004044594.1|	-	5.1e-14	52.7	0.7	3e-07	31.0	0.0	2.1	2	0	0	2	2	2	2	Glyoxalase-like	domain
Glyoxalase_4	PF13669.1	gi|313122667|ref|YP_004044594.1|	-	0.0001	22.2	0.4	0.43	10.6	0.0	3.2	1	1	1	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
YcfA	PF07927.7	gi|313122667|ref|YP_004044594.1|	-	0.085	12.7	0.0	0.19	11.6	0.0	1.6	1	0	0	1	1	1	0	YcfA-like	protein
Abhydrolase_2	PF02230.11	gi|313122668|ref|YP_004044595.1|	-	1.5e-22	80.1	0.0	1.2e-21	77.1	0.0	1.9	1	1	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_5	PF12695.2	gi|313122668|ref|YP_004044595.1|	-	1.3e-13	50.9	0.2	1.5e-13	50.7	0.1	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|313122668|ref|YP_004044595.1|	-	7.2e-13	48.9	4.5	2.9e-10	40.4	2.0	2.1	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|313122668|ref|YP_004044595.1|	-	8.9e-07	28.4	0.0	1.3e-06	27.8	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|313122668|ref|YP_004044595.1|	-	0.00017	21.2	0.0	0.00026	20.6	0.0	1.3	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.3	gi|313122668|ref|YP_004044595.1|	-	0.017	14.9	0.1	0.05	13.4	0.0	1.8	2	0	0	2	2	2	0	Putative	lysophospholipase
NUDIX-like	PF09296.6	gi|313122668|ref|YP_004044595.1|	-	0.022	15.0	0.0	0.41	11.0	0.0	2.3	1	1	0	1	1	1	0	NADH	pyrophosphatase-like	rudimentary	NUDIX	domain
FSH1	PF03959.8	gi|313122668|ref|YP_004044595.1|	-	0.13	11.7	0.0	0.17	11.2	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
DUF2326	PF10088.4	gi|313122668|ref|YP_004044595.1|	-	0.14	11.7	0.1	0.57	9.8	0.1	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2326)
CoA_binding_2	PF13380.1	gi|313122669|ref|YP_004044596.1|	-	6.9e-37	126.1	0.3	8e-37	125.9	0.2	1.0	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|313122669|ref|YP_004044596.1|	-	8.5e-06	26.1	0.0	1.3e-05	25.6	0.0	1.2	1	0	0	1	1	1	1	CoA	binding	domain
Eno-Rase_NADH_b	PF12242.3	gi|313122669|ref|YP_004044596.1|	-	0.044	13.5	0.0	0.092	12.5	0.0	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DUF77	PF01910.12	gi|313122670|ref|YP_004044597.1|	-	5.8e-21	73.9	0.4	6.6e-21	73.7	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
Usp	PF00582.21	gi|313122671|ref|YP_004044598.1|	-	6.8e-61	204.5	2.8	6.1e-33	113.9	0.4	2.0	2	0	0	2	2	2	2	Universal	stress	protein	family
MGS	PF02142.17	gi|313122671|ref|YP_004044598.1|	-	0.00093	19.0	0.1	0.0031	17.4	0.0	1.9	2	0	0	2	2	2	1	MGS-like	domain
AA_permease_2	PF13520.1	gi|313122673|ref|YP_004044600.1|	-	7.8e-33	113.6	41.5	1.1e-32	113.2	28.7	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|313122673|ref|YP_004044600.1|	-	6.8e-23	80.7	35.9	9.5e-23	80.2	24.9	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Usp	PF00582.21	gi|313122673|ref|YP_004044600.1|	-	3.7e-06	27.1	1.2	0.0021	18.2	0.1	2.3	2	0	0	2	2	2	2	Universal	stress	protein	family
AA_permease_C	PF13906.1	gi|313122673|ref|YP_004044600.1|	-	4.6e-05	23.2	5.0	4.6e-05	23.2	3.4	2.4	2	0	0	2	2	2	1	C-terminus	of	AA_permease
UPF0233	PF06781.7	gi|313122673|ref|YP_004044600.1|	-	1.4	8.5	3.4	0.73	9.4	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0233)
DUF318	PF03773.8	gi|313122674|ref|YP_004044601.1|	-	6e-51	173.2	10.3	8.1e-51	172.8	7.1	1.1	1	0	0	1	1	1	1	Predicted	permease
YHS	PF04945.8	gi|313122674|ref|YP_004044601.1|	-	8e-05	22.4	0.1	0.00015	21.4	0.1	1.5	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|313122674|ref|YP_004044601.1|	-	0.016	14.8	0.2	0.029	14.0	0.1	1.4	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|313122674|ref|YP_004044601.1|	-	0.036	13.8	0.1	0.036	13.8	0.0	2.7	4	0	0	4	4	4	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
NAPRTase	PF04095.11	gi|313122675|ref|YP_004044602.1|	-	9.8e-18	64.3	0.0	1.8e-17	63.4	0.0	1.4	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
QRPTase_C	PF01729.14	gi|313122675|ref|YP_004044602.1|	-	0.029	13.9	0.1	0.063	12.7	0.0	1.6	2	0	0	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Na_Pi_cotrans	PF02690.10	gi|313122677|ref|YP_004044604.1|	-	3.9e-17	62.3	20.1	4.7e-11	42.5	3.3	2.3	2	0	0	2	2	2	2	Na+/Pi-cotransporter
Claudin_2	PF13903.1	gi|313122677|ref|YP_004044604.1|	-	0.11	12.1	17.0	0.062	12.9	3.0	2.8	2	1	0	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
Usp	PF00582.21	gi|313122678|ref|YP_004044605.1|	-	4.6e-24	85.1	2.7	5.2e-24	85.0	1.9	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
AP_endonuc_2	PF01261.19	gi|313122678|ref|YP_004044605.1|	-	0.0077	15.5	0.4	0.069	12.4	0.1	2.0	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
DUF1906	PF08924.6	gi|313122678|ref|YP_004044605.1|	-	0.1	12.4	0.2	1.6	8.6	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1906)
PEX-2N	PF09263.5	gi|313122678|ref|YP_004044605.1|	-	0.13	12.6	0.0	0.28	11.5	0.0	1.6	2	0	0	2	2	2	0	Peroxisome	biogenesis	factor	1,	N-terminal
CTP_transf_2	PF01467.21	gi|313122679|ref|YP_004044606.1|	-	1.8e-07	31.3	1.1	2.9e-06	27.4	0.8	2.1	1	1	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|313122679|ref|YP_004044606.1|	-	0.04	13.5	0.1	0.084	12.4	0.0	1.7	2	0	0	2	2	2	0	FAD	synthetase
RbcS	PF12338.3	gi|313122679|ref|YP_004044606.1|	-	0.062	13.0	0.2	0.15	11.8	0.0	1.7	2	0	0	2	2	2	0	Ribulose-1,5-bisphosphate	carboxylase	small	subunit
VanZ	PF04892.7	gi|313122680|ref|YP_004044607.1|	-	2.8e-07	30.5	0.1	3.6e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	VanZ	like	family
Ammonium_transp	PF00909.16	gi|313122680|ref|YP_004044607.1|	-	0.082	11.3	0.0	0.54	8.6	0.0	2.0	2	0	0	2	2	2	0	Ammonium	Transporter	Family
Cdc6_C	PF09079.6	gi|313122681|ref|YP_004044608.1|	-	1.4e-17	63.2	0.2	2.8e-17	62.2	0.2	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|313122681|ref|YP_004044608.1|	-	3.6e-15	56.2	0.2	1.2e-14	54.5	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|313122681|ref|YP_004044608.1|	-	6.9e-12	45.7	1.1	7.6e-11	42.3	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|313122681|ref|YP_004044608.1|	-	6.2e-06	26.4	0.3	2.3e-05	24.6	0.0	2.1	2	1	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|313122681|ref|YP_004044608.1|	-	8.9e-05	22.2	0.1	0.00025	20.7	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
PhoH	PF02562.11	gi|313122681|ref|YP_004044608.1|	-	0.00015	21.1	0.4	0.039	13.1	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|313122681|ref|YP_004044608.1|	-	0.00015	21.2	0.1	0.00041	19.8	0.0	1.7	1	0	0	1	1	1	1	Sigma-54	interaction	domain
NB-ARC	PF00931.17	gi|313122681|ref|YP_004044608.1|	-	0.00017	20.5	0.0	0.00027	19.9	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
AAA_5	PF07728.9	gi|313122681|ref|YP_004044608.1|	-	0.00017	21.3	0.5	0.0019	17.9	0.4	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|313122681|ref|YP_004044608.1|	-	0.0004	20.6	0.1	0.0015	18.8	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.12	gi|313122681|ref|YP_004044608.1|	-	0.0022	17.8	2.2	0.0071	16.1	0.1	2.5	2	1	1	3	3	3	1	Domain	of	unknown	function	DUF87
DEAD	PF00270.24	gi|313122681|ref|YP_004044608.1|	-	0.0029	17.1	2.3	1	8.8	0.2	2.5	1	1	0	2	2	2	2	DEAD/DEAH	box	helicase
AAA_32	PF13654.1	gi|313122681|ref|YP_004044608.1|	-	0.0047	15.6	0.6	1.3	7.6	0.2	2.2	2	0	0	2	2	2	2	AAA	domain
ABC_tran	PF00005.22	gi|313122681|ref|YP_004044608.1|	-	0.0048	17.1	0.5	0.017	15.3	0.0	2.1	2	1	0	2	2	2	1	ABC	transporter
Kinesin	PF00225.18	gi|313122681|ref|YP_004044608.1|	-	0.005	15.5	0.0	0.011	14.4	0.0	1.6	1	0	0	1	1	1	1	Kinesin	motor	domain
T2SE	PF00437.15	gi|313122681|ref|YP_004044608.1|	-	0.0079	15.1	0.0	0.019	13.8	0.0	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_2	PF07724.9	gi|313122681|ref|YP_004044608.1|	-	0.011	15.6	0.1	0.033	14.1	0.0	1.9	2	0	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
AAA_10	PF12846.2	gi|313122681|ref|YP_004044608.1|	-	0.017	14.5	0.3	0.07	12.5	0.0	1.9	2	0	0	2	2	2	0	AAA-like	domain
Sigma54_activ_2	PF14532.1	gi|313122681|ref|YP_004044608.1|	-	0.017	15.1	0.0	0.048	13.7	0.0	1.8	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Zeta_toxin	PF06414.7	gi|313122681|ref|YP_004044608.1|	-	0.019	14.0	0.0	0.043	12.9	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
Mg_chelatase	PF01078.16	gi|313122681|ref|YP_004044608.1|	-	0.027	13.6	0.0	0.043	12.9	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|313122681|ref|YP_004044608.1|	-	0.028	15.2	0.5	0.22	12.3	0.3	2.6	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|313122681|ref|YP_004044608.1|	-	0.03	13.7	0.0	0.057	12.8	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
P-II	PF00543.17	gi|313122681|ref|YP_004044608.1|	-	0.079	13.4	0.1	0.65	10.5	0.0	2.4	2	1	0	2	2	2	0	Nitrogen	regulatory	protein	P-II
RNA_helicase	PF00910.17	gi|313122681|ref|YP_004044608.1|	-	0.11	12.6	0.1	0.38	10.9	0.0	2.0	1	1	0	1	1	1	0	RNA	helicase
fn3	PF00041.16	gi|313122682|ref|YP_004044609.1|	-	2e-23	82.2	30.5	4.6e-11	42.6	2.9	6.4	7	0	0	7	7	7	4	Fibronectin	type	III	domain
DUF4624	PF15417.1	gi|313122682|ref|YP_004044609.1|	-	0.028	14.0	2.8	0.51	9.9	0.0	3.8	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4624)
DUF1212	PF06738.7	gi|313122685|ref|YP_004044612.1|	-	0.033	13.6	0.1	0.058	12.8	0.0	1.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
DUF4235	PF14019.1	gi|313122685|ref|YP_004044612.1|	-	0.062	13.1	0.1	14	5.6	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4235)
DUF3464	PF11947.3	gi|313122685|ref|YP_004044612.1|	-	0.097	12.1	0.7	0.16	11.3	0.5	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3464)
MarR_2	PF12802.2	gi|313122687|ref|YP_004044614.1|	-	0.0012	18.5	0.1	0.0014	18.2	0.1	1.2	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|313122687|ref|YP_004044614.1|	-	0.0035	16.7	0.1	0.0056	16.0	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_5	PF01022.15	gi|313122687|ref|YP_004044614.1|	-	0.0068	16.0	0.0	0.0095	15.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.1	gi|313122687|ref|YP_004044614.1|	-	0.0076	16.3	0.0	0.059	13.4	0.0	2.1	1	1	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|313122687|ref|YP_004044614.1|	-	0.027	14.5	0.0	0.037	14.1	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_24	PF13412.1	gi|313122687|ref|YP_004044614.1|	-	0.029	13.7	0.0	0.043	13.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF3489	PF11994.3	gi|313122687|ref|YP_004044614.1|	-	0.041	13.8	0.0	0.048	13.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3489)
MarR	PF01047.17	gi|313122687|ref|YP_004044614.1|	-	0.055	13.1	0.0	0.074	12.7	0.0	1.3	1	1	0	1	1	1	0	MarR	family
TFIIE_alpha	PF02002.12	gi|313122687|ref|YP_004044614.1|	-	0.06	12.8	0.0	0.096	12.1	0.0	1.4	1	1	0	1	1	1	0	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|313122687|ref|YP_004044614.1|	-	0.075	12.7	0.0	0.086	12.5	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_43	PF09904.4	gi|313122687|ref|YP_004044614.1|	-	0.077	12.8	0.0	0.092	12.5	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
HDC	PF02329.11	gi|313122688|ref|YP_004044615.1|	-	0.065	11.8	0.0	0.08	11.5	0.0	1.1	1	0	0	1	1	1	0	Histidine	carboxylase	PI	chain
CENP-F_leu_zip	PF10473.4	gi|313122689|ref|YP_004044616.1|	-	8.7e-06	25.6	4.8	8.7e-06	25.6	3.3	2.3	1	1	1	2	2	2	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Spectrin	PF00435.16	gi|313122689|ref|YP_004044616.1|	-	0.00038	20.7	3.9	0.4	11.0	0.3	2.9	2	0	0	2	2	2	2	Spectrin	repeat
XhlA	PF10779.4	gi|313122689|ref|YP_004044616.1|	-	0.0011	18.8	1.7	0.0011	18.8	1.2	2.6	3	0	0	3	3	2	1	Haemolysin	XhlA
DUF869	PF05911.6	gi|313122689|ref|YP_004044616.1|	-	0.002	16.4	2.6	0.002	16.4	1.8	2.0	1	1	1	2	2	2	1	Plant	protein	of	unknown	function	(DUF869)
ATG16	PF08614.6	gi|313122689|ref|YP_004044616.1|	-	0.0067	16.2	2.2	0.0067	16.2	1.5	2.7	2	1	0	3	3	3	1	Autophagy	protein	16	(ATG16)
TSC22	PF01166.13	gi|313122689|ref|YP_004044616.1|	-	0.0071	16.2	4.4	0.35	10.8	0.2	2.9	1	1	1	2	2	2	1	TSC-22/dip/bun	family
FlaC_arch	PF05377.6	gi|313122689|ref|YP_004044616.1|	-	0.0073	16.1	4.5	0.012	15.4	0.7	2.8	2	2	0	2	2	2	1	Flagella	accessory	protein	C	(FlaC)
TPR_MLP1_2	PF07926.7	gi|313122689|ref|YP_004044616.1|	-	0.0097	15.6	1.1	0.0097	15.6	0.7	2.5	2	0	0	2	2	2	1	TPR/MLP1/MLP2-like	protein
Wbp11	PF09429.5	gi|313122689|ref|YP_004044616.1|	-	0.012	15.6	10.7	1	9.3	0.1	3.3	3	0	0	3	3	3	0	WW	domain	binding	protein	11
V_ATPase_I	PF01496.14	gi|313122689|ref|YP_004044616.1|	-	0.012	13.4	3.5	0.019	12.8	2.5	1.3	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
BLOC1_2	PF10046.4	gi|313122689|ref|YP_004044616.1|	-	0.015	15.4	1.2	0.015	15.4	0.8	2.9	3	0	0	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Nnf1	PF03980.9	gi|313122689|ref|YP_004044616.1|	-	0.016	15.2	2.5	0.15	12.0	0.3	2.6	2	0	0	2	2	2	0	Nnf1
TMF_TATA_bd	PF12325.3	gi|313122689|ref|YP_004044616.1|	-	0.018	14.7	4.1	0.018	14.7	2.9	2.4	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
COG5	PF10392.4	gi|313122689|ref|YP_004044616.1|	-	0.02	14.8	4.8	0.057	13.3	0.1	2.7	3	1	0	3	3	2	0	Golgi	transport	complex	subunit	5
bZIP_2	PF07716.10	gi|313122689|ref|YP_004044616.1|	-	0.03	14.1	1.1	0.03	14.1	0.7	3.2	2	1	1	3	3	3	0	Basic	region	leucine	zipper
Cep57_MT_bd	PF06657.8	gi|313122689|ref|YP_004044616.1|	-	0.033	14.1	1.8	0.087	12.7	0.6	2.2	2	0	0	2	2	1	0	Centrosome	microtubule-binding	domain	of	Cep57
GAS	PF13851.1	gi|313122689|ref|YP_004044616.1|	-	0.036	13.2	5.7	0.12	11.6	0.6	2.5	3	0	0	3	3	2	0	Growth-arrest	specific	micro-tubule	binding
bZIP_1	PF00170.16	gi|313122689|ref|YP_004044616.1|	-	0.04	13.8	3.3	0.04	13.8	2.3	1.9	2	0	0	2	2	1	0	bZIP	transcription	factor
Prefoldin_2	PF01920.15	gi|313122689|ref|YP_004044616.1|	-	0.052	13.3	0.8	0.052	13.3	0.6	3.0	3	1	0	3	3	3	0	Prefoldin	subunit
Vac_Fusion	PF02346.11	gi|313122689|ref|YP_004044616.1|	-	0.062	12.7	1.0	0.21	11.0	0.7	1.9	1	0	0	1	1	1	0	Chordopoxvirus	fusion	protein
CENP-Q	PF13094.1	gi|313122689|ref|YP_004044616.1|	-	0.086	12.8	13.1	0.56	10.2	7.7	2.4	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF641	PF04859.7	gi|313122689|ref|YP_004044616.1|	-	0.093	12.4	1.3	0.11	12.3	0.1	1.7	2	0	0	2	2	1	0	Plant	protein	of	unknown	function	(DUF641)
Macoilin	PF09726.4	gi|313122689|ref|YP_004044616.1|	-	0.096	10.9	2.8	0.062	11.5	0.7	1.4	1	1	0	1	1	1	0	Transmembrane	protein
Occludin_ELL	PF07303.8	gi|313122689|ref|YP_004044616.1|	-	0.11	13.2	2.5	7.3	7.3	0.3	3.1	3	0	0	3	3	3	0	Occludin	homology	domain
Snapin_Pallidin	PF14712.1	gi|313122689|ref|YP_004044616.1|	-	0.12	12.6	3.9	0.33	11.2	0.2	2.5	2	0	0	2	2	2	0	Snapin/Pallidin
CCDC155	PF14662.1	gi|313122689|ref|YP_004044616.1|	-	0.13	11.8	7.5	0.25	10.9	5.1	1.5	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
NPV_P10	PF05531.7	gi|313122689|ref|YP_004044616.1|	-	0.13	12.5	0.2	0.13	12.5	0.1	3.6	3	1	1	4	4	3	0	Nucleopolyhedrovirus	P10	protein
Reo_sigmaC	PF04582.7	gi|313122689|ref|YP_004044616.1|	-	0.16	11.1	2.3	0.24	10.5	1.2	1.5	1	1	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
IncA	PF04156.9	gi|313122689|ref|YP_004044616.1|	-	0.16	11.5	17.0	0.037	13.6	8.6	2.2	2	1	0	2	2	2	0	IncA	protein
DUF1192	PF06698.6	gi|313122689|ref|YP_004044616.1|	-	0.21	11.4	5.5	0.096	12.5	1.6	2.2	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF1192)
DUF972	PF06156.8	gi|313122689|ref|YP_004044616.1|	-	0.24	11.7	4.0	0.52	10.6	0.4	2.7	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF972)
UPF0184	PF03670.8	gi|313122689|ref|YP_004044616.1|	-	0.26	11.5	6.4	0.13	12.4	1.4	2.6	3	0	0	3	3	2	0	Uncharacterised	protein	family	(UPF0184)
ADIP	PF11559.3	gi|313122689|ref|YP_004044616.1|	-	0.26	11.1	6.4	0.11	12.3	0.9	2.3	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
ORF6C	PF10552.4	gi|313122689|ref|YP_004044616.1|	-	0.28	10.9	6.3	3	7.6	0.2	3.6	3	1	1	4	4	4	0	ORF6C	domain
Ax_dynein_light	PF10211.4	gi|313122689|ref|YP_004044616.1|	-	0.31	10.8	4.0	0.89	9.3	0.5	2.3	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
PilJ	PF13675.1	gi|313122689|ref|YP_004044616.1|	-	0.39	11.0	7.2	0.26	11.6	2.4	2.5	2	1	0	2	2	2	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
HDV_ag	PF01517.13	gi|313122689|ref|YP_004044616.1|	-	0.43	10.2	3.4	0.88	9.2	0.5	2.2	2	0	0	2	2	2	0	Hepatitis	delta	virus	delta	antigen
DUF2968	PF11180.3	gi|313122689|ref|YP_004044616.1|	-	0.54	9.6	5.0	0.25	10.6	0.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
APG6	PF04111.7	gi|313122689|ref|YP_004044616.1|	-	0.67	8.9	8.0	0.25	10.3	3.1	1.9	1	1	0	2	2	2	0	Autophagy	protein	Apg6
Baculo_PEP_C	PF04513.7	gi|313122689|ref|YP_004044616.1|	-	0.69	9.7	4.5	2.3	8.0	0.4	2.5	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF4164	PF13747.1	gi|313122689|ref|YP_004044616.1|	-	0.93	9.6	15.3	0.054	13.6	4.0	2.7	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4164)
DUF3450	PF11932.3	gi|313122689|ref|YP_004044616.1|	-	1.1	8.4	6.1	0.2	10.9	0.3	2.2	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3450)
HALZ	PF02183.13	gi|313122689|ref|YP_004044616.1|	-	1.2	8.8	10.7	0.38	10.5	3.3	2.8	3	1	0	3	3	2	0	Homeobox	associated	leucine	zipper
DUF2205	PF10224.4	gi|313122689|ref|YP_004044616.1|	-	1.2	8.7	11.9	0.41	10.2	2.3	3.2	3	1	1	4	4	2	0	Predicted	coiled-coil	protein	(DUF2205)
SlyX	PF04102.7	gi|313122689|ref|YP_004044616.1|	-	1.4	9.3	8.5	0.92	9.9	1.5	2.8	3	0	0	3	3	2	0	SlyX
Spc24	PF08286.6	gi|313122689|ref|YP_004044616.1|	-	1.6	8.4	7.9	0.16	11.6	0.9	2.5	3	0	0	3	3	3	0	Spc24	subunit	of	Ndc80
DivIVA	PF05103.8	gi|313122689|ref|YP_004044616.1|	-	1.6	8.8	7.3	0.63	10.0	0.7	2.6	3	0	0	3	3	2	0	DivIVA	protein
Fib_alpha	PF08702.5	gi|313122689|ref|YP_004044616.1|	-	1.7	8.7	5.6	6.5	6.8	0.2	3.0	3	1	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
DUF4472	PF14739.1	gi|313122689|ref|YP_004044616.1|	-	2	8.9	9.3	1.7	9.1	3.1	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4472)
TMCO5	PF14992.1	gi|313122689|ref|YP_004044616.1|	-	2.2	7.3	9.2	5	6.1	6.3	1.5	1	1	0	1	1	1	0	TMCO5	family
DMPK_coil	PF08826.5	gi|313122689|ref|YP_004044616.1|	-	2.4	8.1	11.7	0.79	9.6	2.3	3.0	3	0	0	3	3	2	0	DMPK	coiled	coil	domain	like
DUF607	PF04678.8	gi|313122689|ref|YP_004044616.1|	-	2.6	7.9	4.4	6	6.7	0.4	2.4	3	0	0	3	3	2	0	Protein	of	unknown	function,	DUF607
Rootletin	PF15035.1	gi|313122689|ref|YP_004044616.1|	-	3	7.7	10.6	1.4	8.8	2.8	2.5	3	0	0	3	3	2	0	Ciliary	rootlet	component,	centrosome	cohesion
DivIC	PF04977.10	gi|313122689|ref|YP_004044616.1|	-	3	7.3	13.4	1.8	8.0	2.4	3.2	3	1	0	3	3	3	0	Septum	formation	initiator
Phage_GP20	PF06810.6	gi|313122689|ref|YP_004044616.1|	-	3	7.2	7.8	1.4	8.3	1.4	2.4	1	1	0	2	2	2	0	Phage	minor	structural	protein	GP20
DUF4140	PF13600.1	gi|313122689|ref|YP_004044616.1|	-	3.4	8.1	14.4	0.66	10.4	1.7	3.3	3	1	0	3	3	3	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF1664	PF07889.7	gi|313122689|ref|YP_004044616.1|	-	3.5	7.4	10.5	2.8	7.7	0.2	2.7	3	1	0	3	3	2	0	Protein	of	unknown	function	(DUF1664)
TBPIP	PF07106.8	gi|313122689|ref|YP_004044616.1|	-	3.8	7.0	8.2	0.54	9.7	0.4	2.6	3	1	0	3	3	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
FlxA	PF14282.1	gi|313122689|ref|YP_004044616.1|	-	4	7.4	8.5	2.7	7.9	0.1	2.8	3	0	0	3	3	2	0	FlxA-like	protein
End3	PF12761.2	gi|313122689|ref|YP_004044616.1|	-	5.7	6.5	10.0	2.2	7.8	0.2	2.6	3	0	0	3	3	2	0	Actin	cytoskeleton-regulatory	complex	protein	END3
TMF_DNA_bd	PF12329.3	gi|313122689|ref|YP_004044616.1|	-	6.8	6.5	11.9	0.36	10.6	1.2	3.1	3	1	1	4	4	3	0	TATA	element	modulatory	factor	1	DNA	binding
DUF4200	PF13863.1	gi|313122689|ref|YP_004044616.1|	-	6.9	6.6	11.1	5.2	7.0	0.8	2.7	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4200)
PCNA_N	PF00705.13	gi|313122690|ref|YP_004044617.1|	-	6.1e-06	25.7	0.0	1.1e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|313122690|ref|YP_004044617.1|	-	0.029	14.2	0.0	0.059	13.2	0.0	1.5	1	0	0	1	1	1	0	Proliferating	cell	nuclear	antigen,	C-terminal	domain
TusA	PF01206.12	gi|313122690|ref|YP_004044617.1|	-	0.04	13.5	0.1	1	9.0	0.0	2.5	2	0	0	2	2	2	0	Sulfurtransferase	TusA
AAA_22	PF13401.1	gi|313122692|ref|YP_004044619.1|	-	1.7e-11	44.3	0.1	4.2e-11	43.0	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|313122692|ref|YP_004044619.1|	-	1.7e-10	41.2	5.9	1.9e-10	41.0	1.8	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
Cdc6_C	PF09079.6	gi|313122692|ref|YP_004044619.1|	-	4.1e-07	29.6	0.2	2.4e-06	27.1	0.0	2.4	3	0	0	3	3	3	1	CDC6,	C	terminal
AAA_30	PF13604.1	gi|313122692|ref|YP_004044619.1|	-	9.7e-05	22.0	0.1	0.00018	21.1	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|313122692|ref|YP_004044619.1|	-	0.0042	16.8	0.0	0.0098	15.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|313122692|ref|YP_004044619.1|	-	0.0055	16.9	0.0	0.016	15.4	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DEAD	PF00270.24	gi|313122692|ref|YP_004044619.1|	-	0.0066	15.9	0.4	1.6	8.2	0.0	2.3	1	1	1	2	2	2	1	DEAD/DEAH	box	helicase
T2SE	PF00437.15	gi|313122692|ref|YP_004044619.1|	-	0.013	14.4	0.0	0.023	13.6	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF815	PF05673.8	gi|313122692|ref|YP_004044619.1|	-	0.014	14.3	0.0	0.022	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|313122692|ref|YP_004044619.1|	-	0.022	14.3	0.0	0.075	12.6	0.0	1.8	2	0	0	2	2	2	0	Bacterial	dnaA	protein
AAA_18	PF13238.1	gi|313122692|ref|YP_004044619.1|	-	0.023	15.0	0.0	0.057	13.7	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|313122692|ref|YP_004044619.1|	-	0.024	13.7	0.0	0.054	12.5	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_10	PF12846.2	gi|313122692|ref|YP_004044619.1|	-	0.025	14.0	0.1	0.14	11.5	0.0	2.1	1	1	1	2	2	2	0	AAA-like	domain
AAA_14	PF13173.1	gi|313122692|ref|YP_004044619.1|	-	0.029	14.2	0.0	0.052	13.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.7	gi|313122692|ref|YP_004044619.1|	-	0.03	13.3	1.8	1.3	7.9	0.0	3.2	3	1	0	4	4	4	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_19	PF13245.1	gi|313122692|ref|YP_004044619.1|	-	0.032	13.9	1.4	0.055	13.2	0.3	2.1	2	0	0	2	2	1	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|313122692|ref|YP_004044619.1|	-	0.038	14.7	0.2	0.12	13.2	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|313122692|ref|YP_004044619.1|	-	0.042	12.8	0.0	0.057	12.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.1	gi|313122692|ref|YP_004044619.1|	-	0.044	13.6	0.7	0.12	12.3	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|313122692|ref|YP_004044619.1|	-	0.054	13.0	0.2	0.14	11.6	0.0	1.7	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
NTPase_1	PF03266.10	gi|313122692|ref|YP_004044619.1|	-	0.07	12.8	0.5	5.5	6.6	0.0	2.3	1	1	1	2	2	2	0	NTPase
Penicillinase_R	PF03965.11	gi|313122692|ref|YP_004044619.1|	-	0.094	12.8	0.1	0.28	11.2	0.0	1.8	2	0	0	2	2	2	0	Penicillinase	repressor
Cdc6_C	PF09079.6	gi|313122695|ref|YP_004044622.1|	-	1.7e-19	69.3	0.6	4.4e-19	67.9	0.1	2.0	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|313122695|ref|YP_004044622.1|	-	1.7e-12	47.5	0.4	5.9e-12	45.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|313122695|ref|YP_004044622.1|	-	2.1e-11	44.1	0.6	1.5e-10	41.3	0.0	2.5	2	2	0	2	2	2	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|313122695|ref|YP_004044622.1|	-	3.5e-06	26.8	0.0	9.5e-06	25.4	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|313122695|ref|YP_004044622.1|	-	5.3e-06	26.6	0.0	1.7e-05	25.0	0.0	1.9	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|313122695|ref|YP_004044622.1|	-	9e-06	25.4	0.0	2.2e-05	24.2	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
DUF815	PF05673.8	gi|313122695|ref|YP_004044622.1|	-	0.00091	18.2	0.0	0.0016	17.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_32	PF13654.1	gi|313122695|ref|YP_004044622.1|	-	0.0014	17.3	0.0	0.68	8.5	0.0	2.5	3	0	0	3	3	3	2	AAA	domain
T2SE	PF00437.15	gi|313122695|ref|YP_004044622.1|	-	0.0022	16.9	0.0	0.0059	15.5	0.0	1.7	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF87	PF01935.12	gi|313122695|ref|YP_004044622.1|	-	0.0025	17.6	1.2	1	9.1	0.0	3.2	2	1	0	3	3	3	1	Domain	of	unknown	function	DUF87
DEAD	PF00270.24	gi|313122695|ref|YP_004044622.1|	-	0.0039	16.6	1.2	1.8	8.0	0.0	2.7	2	1	0	3	3	3	1	DEAD/DEAH	box	helicase
AAA_17	PF13207.1	gi|313122695|ref|YP_004044622.1|	-	0.0044	17.8	0.0	0.013	16.3	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|313122695|ref|YP_004044622.1|	-	0.0047	15.8	0.0	0.0089	14.9	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
KAP_NTPase	PF07693.9	gi|313122695|ref|YP_004044622.1|	-	0.0056	15.7	2.9	0.088	11.7	0.0	2.8	2	1	1	3	3	3	1	KAP	family	P-loop	domain
RNA_helicase	PF00910.17	gi|313122695|ref|YP_004044622.1|	-	0.0081	16.3	0.0	0.022	14.9	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
AAA_18	PF13238.1	gi|313122695|ref|YP_004044622.1|	-	0.011	16.0	0.0	0.049	13.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RuvB_N	PF05496.7	gi|313122695|ref|YP_004044622.1|	-	0.012	14.6	0.0	0.23	10.4	0.0	2.5	3	0	0	3	3	3	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|313122695|ref|YP_004044622.1|	-	0.015	14.8	0.0	0.029	13.8	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|313122695|ref|YP_004044622.1|	-	0.015	14.8	0.4	0.051	13.1	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|313122695|ref|YP_004044622.1|	-	0.032	13.9	0.1	10	5.8	0.0	3.2	3	1	1	4	4	4	0	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.9	gi|313122695|ref|YP_004044622.1|	-	0.032	14.1	0.0	0.075	12.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
ORC4_C	PF14629.1	gi|313122695|ref|YP_004044622.1|	-	0.038	13.3	0.0	0.061	12.6	0.0	1.4	1	0	0	1	1	1	0	Origin	recognition	complex	(ORC)	subunit	4	C-terminus
AAA_14	PF13173.1	gi|313122695|ref|YP_004044622.1|	-	0.039	13.8	0.1	0.12	12.2	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|313122695|ref|YP_004044622.1|	-	0.068	12.3	0.0	0.14	11.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF2075	PF09848.4	gi|313122695|ref|YP_004044622.1|	-	0.079	11.9	0.0	0.13	11.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.1	gi|313122695|ref|YP_004044622.1|	-	0.093	12.6	0.2	5.1	6.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|313122695|ref|YP_004044622.1|	-	0.11	11.8	2.0	0.67	9.3	1.3	2.4	1	1	0	1	1	1	0	AAA-like	domain
ABC_tran	PF00005.22	gi|313122695|ref|YP_004044622.1|	-	0.13	12.5	0.2	0.38	11.0	0.0	2.0	2	1	0	2	2	2	0	ABC	transporter
MMR_HSR1	PF01926.18	gi|313122695|ref|YP_004044622.1|	-	0.13	12.1	0.1	0.65	9.9	0.1	2.2	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|313122696|ref|YP_004044623.1|	-	2.7e-34	118.8	0.0	5.6e-34	117.8	0.0	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
DUF234	PF03008.9	gi|313122696|ref|YP_004044623.1|	-	1.6e-17	63.4	0.0	3.7e-17	62.2	0.0	1.6	1	0	0	1	1	1	1	Archaea	bacterial	proteins	of	unknown	function
AAA_22	PF13401.1	gi|313122696|ref|YP_004044623.1|	-	5.8e-08	32.9	0.0	1.2e-07	31.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|313122696|ref|YP_004044623.1|	-	5.6e-07	29.7	0.1	1.5e-06	28.3	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|313122696|ref|YP_004044623.1|	-	2.3e-05	24.3	0.0	4e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
HTH_IclR	PF09339.5	gi|313122696|ref|YP_004044623.1|	-	0.0053	16.3	0.1	0.015	14.8	0.0	1.7	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_45	PF14947.1	gi|313122696|ref|YP_004044623.1|	-	0.11	12.3	0.0	0.2	11.5	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
Miro	PF08477.8	gi|313122696|ref|YP_004044623.1|	-	0.17	12.3	0.0	0.32	11.5	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
Acetyltransf_4	PF13420.1	gi|313122697|ref|YP_004044624.1|	-	1.7e-18	67.0	0.2	2.1e-18	66.7	0.1	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|313122697|ref|YP_004044624.1|	-	4.1e-18	65.1	0.2	6.3e-18	64.5	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|313122697|ref|YP_004044624.1|	-	1.3e-17	63.9	0.1	1.7e-17	63.6	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|313122697|ref|YP_004044624.1|	-	9.9e-13	48.0	0.1	2.4e-12	46.8	0.0	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|313122697|ref|YP_004044624.1|	-	1.6e-09	37.6	0.4	4.6e-09	36.2	0.3	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|313122697|ref|YP_004044624.1|	-	2.7e-09	36.6	0.0	4.7e-09	35.8	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|313122697|ref|YP_004044624.1|	-	9.4e-08	32.3	0.5	1.1e-07	32.0	0.3	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|313122697|ref|YP_004044624.1|	-	5.5e-05	23.0	0.5	8.7e-05	22.4	0.3	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.1	gi|313122697|ref|YP_004044624.1|	-	0.00091	19.1	0.0	0.0012	18.7	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.1	gi|313122697|ref|YP_004044624.1|	-	0.0013	18.4	0.0	0.0024	17.5	0.0	1.4	1	0	0	1	1	1	1	ESCO1/2	acetyl-transferase
DUF3650	PF12368.3	gi|313122697|ref|YP_004044624.1|	-	0.051	13.0	1.1	0.16	11.4	0.8	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3650)
Acetyltransf_CG	PF14542.1	gi|313122697|ref|YP_004044624.1|	-	0.067	13.0	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
GNAT_acetyltr_2	PF13718.1	gi|313122697|ref|YP_004044624.1|	-	0.088	12.1	0.0	0.17	11.2	0.0	1.5	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
ITI_HC_C	PF06668.7	gi|313122697|ref|YP_004044624.1|	-	0.11	11.9	0.0	0.16	11.4	0.0	1.2	1	0	0	1	1	1	0	Inter-alpha-trypsin	inhibitor	heavy	chain	C-terminus
AMP-binding	PF00501.23	gi|313122698|ref|YP_004044625.1|	-	2.4e-89	299.6	0.2	3.1e-89	299.2	0.2	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|313122698|ref|YP_004044625.1|	-	5e-16	59.4	0.6	9.9e-16	58.4	0.4	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DMRL_synthase	PF00885.14	gi|313122698|ref|YP_004044625.1|	-	0.00012	21.7	1.1	0.48	10.0	0.0	2.2	2	0	0	2	2	2	2	6,7-dimethyl-8-ribityllumazine	synthase
HTH_10	PF04967.7	gi|313122699|ref|YP_004044626.1|	-	2.5e-20	71.7	0.0	7.8e-20	70.2	0.0	1.9	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GAF_2	PF13185.1	gi|313122699|ref|YP_004044626.1|	-	1.3e-10	41.9	2.7	2e-10	41.3	0.5	2.2	2	0	0	2	2	2	1	GAF	domain
GAF_3	PF13492.1	gi|313122699|ref|YP_004044626.1|	-	1.5e-07	31.5	0.2	5e-07	29.8	0.1	2.0	2	0	0	2	2	2	1	GAF	domain
Phage_integrase	PF00589.17	gi|313122699|ref|YP_004044626.1|	-	1.6e-06	27.9	0.0	2.2e-05	24.1	0.0	2.4	2	0	0	2	2	2	1	Phage	integrase	family
GAF	PF01590.21	gi|313122699|ref|YP_004044626.1|	-	0.002	18.2	0.2	0.0047	17.0	0.1	1.8	1	1	0	1	1	1	1	GAF	domain
Sigma70_r4	PF04545.11	gi|313122699|ref|YP_004044626.1|	-	0.025	13.8	0.0	0.079	12.2	0.0	1.9	1	0	0	1	1	1	0	Sigma-70,	region	4
GerE	PF00196.14	gi|313122699|ref|YP_004044626.1|	-	0.08	12.2	0.0	0.25	10.6	0.0	1.9	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
AMP-binding	PF00501.23	gi|313122700|ref|YP_004044627.1|	-	5.6e-93	311.5	0.0	6.7e-93	311.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|313122700|ref|YP_004044627.1|	-	1.1e-17	64.6	0.2	2.2e-17	63.7	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF4212	PF13937.1	gi|313122701|ref|YP_004044628.1|	-	6.2e-25	87.0	0.0	7.6e-25	86.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4212)
DUF485	PF04341.7	gi|313122701|ref|YP_004044628.1|	-	0.0011	18.5	0.3	0.0017	18.0	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF485
DUF2781	PF10914.3	gi|313122701|ref|YP_004044628.1|	-	0.002	17.8	0.5	0.0026	17.5	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2781)
DUF3311	PF11755.3	gi|313122701|ref|YP_004044628.1|	-	0.019	14.4	0.5	0.031	13.8	0.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3311)
SSF	PF00474.12	gi|313122702|ref|YP_004044629.1|	-	5e-55	186.8	34.5	7.4e-55	186.2	23.9	1.3	1	0	0	1	1	1	1	Sodium:solute	symporter	family
Usp	PF00582.21	gi|313122703|ref|YP_004044630.1|	-	6e-40	136.6	1.5	7.1e-40	136.4	1.0	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
ETF	PF01012.16	gi|313122703|ref|YP_004044630.1|	-	0.064	12.9	0.1	1.7	8.3	0.1	2.2	1	1	0	1	1	1	0	Electron	transfer	flavoprotein	domain
DUF1785	PF08699.5	gi|313122704|ref|YP_004044631.1|	-	0.01	15.1	0.0	0.014	14.7	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1785)
Abhydrolase_6	PF12697.2	gi|313122705|ref|YP_004044632.1|	-	1.7e-36	126.2	0.6	2e-36	126.0	0.4	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|313122705|ref|YP_004044632.1|	-	5.8e-25	88.1	0.1	4.2e-24	85.3	0.1	2.0	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|313122705|ref|YP_004044632.1|	-	2.7e-16	59.6	0.3	1.4e-14	54.0	0.2	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
UPF0227	PF05728.7	gi|313122705|ref|YP_004044632.1|	-	1.1e-05	25.2	0.0	1.6e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0227)
Ndr	PF03096.9	gi|313122705|ref|YP_004044632.1|	-	5e-05	21.9	0.0	0.00019	19.9	0.0	1.7	1	1	1	2	2	2	1	Ndr	family
Thioesterase	PF00975.15	gi|313122705|ref|YP_004044632.1|	-	0.00026	21.3	0.0	0.00034	20.9	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	domain
Hydrolase_4	PF12146.3	gi|313122705|ref|YP_004044632.1|	-	0.00034	20.3	0.0	0.00059	19.6	0.0	1.4	1	0	0	1	1	1	1	Putative	lysophospholipase
DUF2048	PF09752.4	gi|313122705|ref|YP_004044632.1|	-	0.0024	16.7	0.0	0.01	14.7	0.0	1.8	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2048)
Patatin	PF01734.17	gi|313122705|ref|YP_004044632.1|	-	0.0034	17.3	0.1	0.0062	16.4	0.1	1.6	1	1	0	1	1	1	1	Patatin-like	phospholipase
Esterase	PF00756.15	gi|313122705|ref|YP_004044632.1|	-	0.012	15.0	0.0	0.012	15.0	0.0	1.3	1	0	0	1	1	1	0	Putative	esterase
Esterase_phd	PF10503.4	gi|313122705|ref|YP_004044632.1|	-	0.015	14.5	0.1	0.15	11.2	0.0	2.1	2	0	0	2	2	2	0	Esterase	PHB	depolymerase
PGAP1	PF07819.8	gi|313122705|ref|YP_004044632.1|	-	0.061	12.9	0.2	1.8	8.0	0.1	2.4	1	1	0	1	1	1	0	PGAP1-like	protein
Abhydrolase_3	PF07859.8	gi|313122705|ref|YP_004044632.1|	-	0.12	11.9	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
DoxX	PF07681.7	gi|313122706|ref|YP_004044633.1|	-	1.1e-21	77.0	14.3	1.9e-21	76.2	9.9	1.4	1	0	0	1	1	1	1	DoxX
DoxD	PF04173.8	gi|313122706|ref|YP_004044633.1|	-	0.00083	19.0	4.2	0.0015	18.2	2.9	1.4	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
PQQ_3	PF13570.1	gi|313122708|ref|YP_004044635.1|	-	4.8e-58	191.9	44.7	7.7e-11	41.9	0.7	8.1	8	0	0	8	8	8	8	PQQ-like	domain
PQQ_2	PF13360.1	gi|313122708|ref|YP_004044635.1|	-	6.9e-52	176.2	16.0	1e-19	70.9	1.9	3.7	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|313122708|ref|YP_004044635.1|	-	1.1e-44	147.7	16.3	4.7e-08	32.1	0.2	7.2	7	0	0	7	7	7	7	PQQ	enzyme	repeat
PsbP	PF01789.11	gi|313122708|ref|YP_004044635.1|	-	1.8e-05	24.2	0.1	3.8	6.9	0.0	5.0	4	1	1	5	5	5	1	PsbP
DUF1150	PF06620.6	gi|313122708|ref|YP_004044635.1|	-	0.0014	18.4	2.8	4.8	7.0	0.0	5.0	5	0	0	5	5	5	1	Protein	of	unknown	function	(DUF1150)
Lant_dehyd_C	PF04738.8	gi|313122708|ref|YP_004044635.1|	-	0.024	12.8	0.0	7.8	4.6	0.0	3.2	4	0	0	4	4	4	0	Lantibiotic	dehydratase,	C	terminus
DUF2862	PF11061.3	gi|313122708|ref|YP_004044635.1|	-	0.051	13.2	0.0	36	4.1	0.0	4.4	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2862)
NUDIX-like	PF09296.6	gi|313122708|ref|YP_004044635.1|	-	0.094	13.0	0.2	3.9	7.8	0.0	3.2	1	1	1	2	2	2	0	NADH	pyrophosphatase-like	rudimentary	NUDIX	domain
PQQ_3	PF13570.1	gi|313122709|ref|YP_004044636.1|	-	9e-73	238.7	30.7	2.3e-12	46.7	0.1	8.4	8	1	0	8	8	8	8	PQQ-like	domain
PQQ_2	PF13360.1	gi|313122709|ref|YP_004044636.1|	-	1.9e-56	191.1	9.7	8.6e-32	110.4	0.5	3.1	2	1	1	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|313122709|ref|YP_004044636.1|	-	1.8e-46	153.3	14.6	9.4e-10	37.5	0.1	8.6	9	0	0	9	9	9	5	PQQ	enzyme	repeat
DUF4394	PF14339.1	gi|313122709|ref|YP_004044636.1|	-	0.0064	15.7	0.3	2.8	7.1	0.0	4.0	2	2	1	3	3	3	1	Domain	of	unknown	function	(DUF4394)
Arylsulfotrans	PF05935.6	gi|313122709|ref|YP_004044636.1|	-	0.015	13.8	0.0	10	4.5	0.0	3.1	2	1	0	2	2	2	0	Arylsulfotransferase	(ASST)
Glycos_transf_2	PF00535.21	gi|313122709|ref|YP_004044636.1|	-	0.11	12.1	0.1	0.2	11.2	0.1	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF4382	PF14321.1	gi|313122710|ref|YP_004044637.1|	-	7.4e-28	97.3	1.0	7.4e-28	97.3	0.7	2.6	2	1	1	3	3	3	1	Domain	of	unknown	function	(DUF4382)
DUF4198	PF10670.4	gi|313122710|ref|YP_004044637.1|	-	2.5e-05	24.4	12.4	0.01	15.8	1.4	3.3	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4198)
DUF4480	PF13715.1	gi|313122710|ref|YP_004044637.1|	-	5.7e-05	23.0	8.3	0.016	15.2	0.4	3.3	2	2	1	4	4	4	2	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|313122710|ref|YP_004044637.1|	-	0.00011	22.1	16.8	0.00043	20.2	0.6	3.8	3	1	0	3	3	3	2	Carboxypeptidase	regulatory-like	domain
DUF2606	PF10794.4	gi|313122710|ref|YP_004044637.1|	-	0.044	13.2	0.5	1.3	8.4	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2606)
PEGA	PF08308.6	gi|313122710|ref|YP_004044637.1|	-	0.11	12.3	2.9	5.4	6.8	0.2	3.3	2	1	0	2	2	2	0	PEGA	domain
DUF1684	PF07920.6	gi|313122710|ref|YP_004044637.1|	-	0.22	11.3	4.7	0.3	10.9	1.0	2.7	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF1684)
Nitroreductase	PF00881.19	gi|313122711|ref|YP_004044638.1|	-	3.9e-16	59.2	0.0	3.8e-09	36.5	0.0	2.3	2	0	0	2	2	2	2	Nitroreductase	family
Sugar_tr	PF00083.19	gi|313122713|ref|YP_004044640.1|	-	9e-125	416.7	26.3	1e-124	416.5	18.2	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|313122713|ref|YP_004044640.1|	-	7.5e-41	140.0	61.1	4.1e-32	111.2	15.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TRI12	PF06609.8	gi|313122713|ref|YP_004044640.1|	-	8.6e-09	34.1	2.3	8.6e-09	34.1	1.6	2.0	2	0	0	2	2	2	1	Fungal	trichothecene	efflux	pump	(TRI12)
OATP	PF03137.15	gi|313122713|ref|YP_004044640.1|	-	0.00014	20.0	1.4	0.18	9.8	0.0	2.2	2	0	0	2	2	2	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MFS_3	PF05977.8	gi|313122713|ref|YP_004044640.1|	-	0.00051	18.2	6.0	0.00051	18.2	4.2	2.2	2	0	0	2	2	2	1	Transmembrane	secretion	effector
Bac_export_3	PF01313.14	gi|313122713|ref|YP_004044640.1|	-	0.068	12.8	0.1	0.068	12.8	0.1	3.8	6	0	0	6	6	6	0	Bacterial	export	proteins,	family	3
SBF	PF01758.11	gi|313122714|ref|YP_004044641.1|	-	1.2e-10	41.1	18.9	2e-10	40.3	13.1	1.5	1	0	0	1	1	1	1	Sodium	Bile	acid	symporter	family
DUF4137	PF13593.1	gi|313122714|ref|YP_004044641.1|	-	3.7e-08	32.8	16.9	5.1e-08	32.3	11.7	1.3	1	1	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
HxlR	PF01638.12	gi|313122715|ref|YP_004044642.1|	-	4.7e-20	71.0	0.0	5.8e-20	70.7	0.0	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.9	gi|313122715|ref|YP_004044642.1|	-	1.1e-05	25.0	0.3	1.6e-05	24.5	0.2	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|313122715|ref|YP_004044642.1|	-	0.00017	21.2	0.0	0.00025	20.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|313122715|ref|YP_004044642.1|	-	0.00042	20.5	0.0	0.0006	20.0	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|313122715|ref|YP_004044642.1|	-	0.00061	19.5	0.0	0.00079	19.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|313122715|ref|YP_004044642.1|	-	0.00071	18.9	0.0	0.001	18.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|313122715|ref|YP_004044642.1|	-	0.0031	17.1	0.0	0.005	16.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Penicillinase_R	PF03965.11	gi|313122715|ref|YP_004044642.1|	-	0.0031	17.5	0.0	0.0051	16.8	0.0	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_45	PF14947.1	gi|313122715|ref|YP_004044642.1|	-	0.02	14.7	0.0	0.03	14.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|313122715|ref|YP_004044642.1|	-	0.029	14.4	0.0	0.038	14.0	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
SHOCT	PF09851.4	gi|313122715|ref|YP_004044642.1|	-	0.049	13.1	0.8	0.43	10.1	0.3	2.3	2	0	0	2	2	2	0	Short	C-terminal	domain
Cullin_Nedd8	PF10557.4	gi|313122715|ref|YP_004044642.1|	-	0.071	12.9	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Cullin	protein	neddylation	domain
CARD	PF00619.16	gi|313122715|ref|YP_004044642.1|	-	0.087	12.6	0.1	0.14	11.9	0.0	1.4	1	1	0	1	1	1	0	Caspase	recruitment	domain
LexA_DNA_bind	PF01726.11	gi|313122715|ref|YP_004044642.1|	-	0.089	12.3	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Peripla_BP_2	PF01497.13	gi|313122717|ref|YP_004044644.1|	-	2.8e-23	82.2	0.0	3.7e-23	81.8	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
TAT_signal	PF10518.4	gi|313122717|ref|YP_004044644.1|	-	0.0056	16.5	0.4	0.01	15.7	0.3	1.4	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Myco_19_kDa	PF05481.7	gi|313122717|ref|YP_004044644.1|	-	0.11	12.3	3.3	0.2	11.4	2.3	1.4	1	0	0	1	1	1	0	Mycobacterium	19	kDa	lipoprotein	antigen
Copper-bind	PF00127.15	gi|313122718|ref|YP_004044645.1|	-	3.8e-28	97.6	0.1	3.8e-16	59.1	0.0	3.0	2	2	0	2	2	2	2	Copper	binding	proteins,	plastocyanin/azurin	family
Cupredoxin_1	PF13473.1	gi|313122718|ref|YP_004044645.1|	-	1.1e-10	41.2	0.0	7.7e-06	25.7	0.0	2.4	2	0	0	2	2	2	2	Cupredoxin-like	domain
Serpentine_r_xa	PF03383.10	gi|313122720|ref|YP_004044647.1|	-	0.072	12.8	2.0	0.17	11.6	0.1	1.9	1	1	1	2	2	2	0	Caenorhabditis	serpentine	receptor-like	protein,	class	xa
DUF202	PF02656.10	gi|313122720|ref|YP_004044647.1|	-	0.63	10.3	3.5	0.35	11.1	0.5	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
EcsB	PF05975.7	gi|313122720|ref|YP_004044647.1|	-	3.9	5.8	9.1	8.1	4.7	6.3	1.5	1	1	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
MS_channel	PF00924.13	gi|313122721|ref|YP_004044648.1|	-	1.2e-46	158.7	0.0	1.2e-46	158.7	0.0	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
PRA1	PF03208.14	gi|313122721|ref|YP_004044648.1|	-	2.4	7.5	8.9	4.2	6.7	6.2	1.4	1	0	0	1	1	1	0	PRA1	family	protein
Na_H_antiporter	PF03553.9	gi|313122723|ref|YP_004044650.1|	-	5.8e-43	147.0	46.2	9.2e-33	113.5	15.5	2.1	1	1	1	2	2	2	2	Na+/H+	antiporter	family
IclR	PF01614.13	gi|313122724|ref|YP_004044651.1|	-	1.1e-27	96.2	0.1	4e-27	94.4	0.0	1.7	2	0	0	2	2	2	1	Bacterial	transcriptional	regulator
HTH_IclR	PF09339.5	gi|313122724|ref|YP_004044651.1|	-	3.5e-08	32.8	0.0	1.3e-07	31.1	0.0	1.9	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|313122724|ref|YP_004044651.1|	-	5.3e-05	22.9	0.1	0.00011	21.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|313122724|ref|YP_004044651.1|	-	6.8e-05	22.1	0.1	0.00014	21.1	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|313122724|ref|YP_004044651.1|	-	0.0018	17.9	0.0	0.0033	17.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|313122724|ref|YP_004044651.1|	-	0.0018	17.9	0.0	0.0034	17.0	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Sigma70_r4_2	PF08281.7	gi|313122724|ref|YP_004044651.1|	-	0.0028	17.0	0.0	0.0066	15.8	0.0	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
MarR_2	PF12802.2	gi|313122724|ref|YP_004044651.1|	-	0.0034	17.0	0.0	0.0074	15.9	0.0	1.5	1	0	0	1	1	1	1	MarR	family
DUF1803	PF08820.5	gi|313122724|ref|YP_004044651.1|	-	0.0041	16.7	0.0	0.008	15.8	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1803)
HTH_40	PF14493.1	gi|313122724|ref|YP_004044651.1|	-	0.0079	16.3	0.1	0.02	15.1	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|313122724|ref|YP_004044651.1|	-	0.0085	15.7	0.3	0.016	14.9	0.2	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|313122724|ref|YP_004044651.1|	-	0.018	14.6	0.1	0.11	12.2	0.1	2.2	2	0	0	2	2	2	0	HTH	domain
CodY	PF06018.9	gi|313122724|ref|YP_004044651.1|	-	0.024	13.9	0.0	0.042	13.1	0.0	1.4	1	0	0	1	1	1	0	CodY	GAF-like	domain
HTH_34	PF13601.1	gi|313122724|ref|YP_004044651.1|	-	0.092	12.7	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|313122724|ref|YP_004044651.1|	-	0.1	12.9	0.1	0.21	11.9	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
GCV_T	PF01571.16	gi|313122725|ref|YP_004044652.1|	-	5e-61	205.7	0.0	7.1e-61	205.2	0.0	1.2	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|313122725|ref|YP_004044652.1|	-	6.9e-27	93.3	0.0	1.2e-26	92.5	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
TrmE_N	PF10396.4	gi|313122725|ref|YP_004044652.1|	-	8.4e-07	28.9	0.0	0.00037	20.4	0.0	2.9	3	1	0	3	3	3	2	GTP-binding	protein	TrmE	N-terminus
SoxG	PF04268.7	gi|313122725|ref|YP_004044652.1|	-	0.048	13.5	0.0	0.5	10.2	0.0	2.2	2	0	0	2	2	2	0	Sarcosine	oxidase,	gamma	subunit	family
GCV_H	PF01597.14	gi|313122726|ref|YP_004044653.1|	-	1.2e-39	134.7	0.0	1.3e-39	134.5	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|313122726|ref|YP_004044653.1|	-	0.0054	16.3	0.1	0.008	15.7	0.1	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
DUF2118	PF09891.4	gi|313122726|ref|YP_004044653.1|	-	0.045	13.4	0.0	0.061	13.0	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
RnfC_N	PF13375.1	gi|313122726|ref|YP_004044653.1|	-	0.14	11.9	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
GDC-P	PF02347.11	gi|313122727|ref|YP_004044654.1|	-	1.3e-109	366.7	0.0	1.6e-109	366.5	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Cys_Met_Meta_PP	PF01053.15	gi|313122727|ref|YP_004044654.1|	-	0.024	12.9	0.0	0.035	12.3	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.14	gi|313122728|ref|YP_004044655.1|	-	5.1e-10	38.6	0.0	8.4e-10	37.9	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
GDC-P	PF02347.11	gi|313122728|ref|YP_004044655.1|	-	5.1e-09	35.3	0.0	1.9e-07	30.1	0.0	2.2	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Beta_elim_lyase	PF01212.16	gi|313122728|ref|YP_004044655.1|	-	0.00013	21.2	0.0	0.0002	20.5	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
SHMT	PF00464.14	gi|313122729|ref|YP_004044656.1|	-	3e-159	529.7	0.3	3.6e-159	529.4	0.2	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|313122729|ref|YP_004044656.1|	-	1.9e-08	33.6	0.0	5e-08	32.3	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|313122729|ref|YP_004044656.1|	-	2.2e-06	27.0	0.0	7.3e-05	22.0	0.0	2.1	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|313122729|ref|YP_004044656.1|	-	1.6e-05	24.1	0.9	2.5e-05	23.4	0.6	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Trypsin_2	PF13365.1	gi|313122729|ref|YP_004044656.1|	-	0.003	17.5	0.0	0.013	15.5	0.0	2.1	2	1	0	2	2	2	1	Trypsin-like	peptidase	domain
ATP-synt_F	PF01990.12	gi|313122729|ref|YP_004044656.1|	-	0.095	13.1	0.0	0.29	11.5	0.0	1.8	1	0	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
PALP	PF00291.20	gi|313122730|ref|YP_004044657.1|	-	3.2e-79	266.3	4.5	3.8e-79	266.0	3.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|313122730|ref|YP_004044657.1|	-	1.5e-08	33.9	0.1	4.5e-08	32.3	0.1	1.9	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.1	gi|313122730|ref|YP_004044657.1|	-	1.6e-05	25.1	0.0	6e-05	23.2	0.0	2.1	3	0	0	3	3	3	1	ACT	domain
Beta-lactamase	PF00144.19	gi|313122731|ref|YP_004044658.1|	-	3.4e-61	207.1	0.0	5e-61	206.5	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase
Pab87_oct	PF13969.1	gi|313122731|ref|YP_004044658.1|	-	1e-18	67.1	0.0	2.9e-18	65.7	0.0	1.8	2	0	0	2	2	2	1	Pab87	octamerisation	domain
Pyr_redox_2	PF07992.9	gi|313122732|ref|YP_004044659.1|	-	2.9e-40	138.2	0.0	5e-40	137.5	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|313122732|ref|YP_004044659.1|	-	3.5e-35	120.3	2.1	3.6e-35	120.3	0.5	1.8	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|313122732|ref|YP_004044659.1|	-	1e-22	80.3	7.7	6.9e-20	71.2	0.2	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|313122732|ref|YP_004044659.1|	-	1e-10	41.0	6.0	2.4e-08	33.2	1.0	3.4	3	0	0	3	3	3	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|313122732|ref|YP_004044659.1|	-	1.1e-09	38.6	0.6	3.4e-08	33.8	0.1	2.3	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|313122732|ref|YP_004044659.1|	-	1.3e-09	37.4	3.6	2e-07	30.2	0.9	2.7	3	1	0	3	3	3	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|313122732|ref|YP_004044659.1|	-	3.1e-09	36.1	11.5	5.4e-05	22.2	1.7	3.8	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|313122732|ref|YP_004044659.1|	-	7.3e-09	35.2	0.2	1.3e-08	34.4	0.1	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|313122732|ref|YP_004044659.1|	-	3.6e-08	33.3	1.4	5.9e-05	23.0	0.3	2.8	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|313122732|ref|YP_004044659.1|	-	9e-08	30.9	3.6	1.9e-05	23.3	0.4	3.1	3	0	0	3	3	3	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|313122732|ref|YP_004044659.1|	-	1.8e-07	30.5	4.9	0.0001	21.5	0.2	3.0	2	1	0	2	2	2	2	FAD	binding	domain
3HCDH_N	PF02737.13	gi|313122732|ref|YP_004044659.1|	-	2.2e-06	27.4	6.8	0.00081	19.0	0.0	3.2	3	1	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|313122732|ref|YP_004044659.1|	-	4.5e-06	25.9	4.3	0.00033	19.8	0.1	2.9	3	0	0	3	3	3	2	Thi4	family
UDPG_MGDP_dh_N	PF03721.9	gi|313122732|ref|YP_004044659.1|	-	6.8e-06	25.5	3.7	0.00029	20.2	0.0	3.1	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|313122732|ref|YP_004044659.1|	-	0.00028	20.4	1.0	0.059	12.9	0.0	2.9	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.7	gi|313122732|ref|YP_004044659.1|	-	0.00058	18.8	2.3	0.018	13.9	0.4	2.5	2	1	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.1	gi|313122732|ref|YP_004044659.1|	-	0.00059	20.0	0.2	0.97	9.7	0.0	2.7	2	0	0	2	2	2	2	Putative	NAD(P)-binding
XdhC_C	PF13478.1	gi|313122732|ref|YP_004044659.1|	-	0.003	17.8	0.8	0.1	12.9	0.0	2.7	3	0	0	3	3	3	1	XdhC	Rossmann	domain
Trp_halogenase	PF04820.9	gi|313122732|ref|YP_004044659.1|	-	0.004	15.8	0.1	0.004	15.8	0.1	1.6	2	0	0	2	2	2	1	Tryptophan	halogenase
TrkA_N	PF02254.13	gi|313122732|ref|YP_004044659.1|	-	0.0069	16.3	3.0	0.095	12.7	0.0	2.9	3	0	0	3	3	3	1	TrkA-N	domain
NAD_binding_9	PF13454.1	gi|313122732|ref|YP_004044659.1|	-	0.056	13.2	1.9	0.51	10.0	0.1	2.7	2	1	1	3	3	3	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|313122732|ref|YP_004044659.1|	-	0.19	10.6	0.0	9.7	4.9	0.0	2.5	3	0	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Radical_SAM	PF04055.16	gi|313122733|ref|YP_004044660.1|	-	7.8e-15	55.4	0.0	1.8e-14	54.2	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Ribonuc_L-PSP	PF01042.16	gi|313122734|ref|YP_004044661.1|	-	1.8e-39	134.2	0.1	2e-39	134.1	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
YjgF_endoribonc	PF14588.1	gi|313122734|ref|YP_004044661.1|	-	0.0014	18.5	0.0	0.0017	18.2	0.0	1.2	1	0	0	1	1	1	1	YjgF/chorismate_mutase-like,	putative	endoribonuclease
DUF4488	PF14869.1	gi|313122734|ref|YP_004044661.1|	-	0.018	14.6	0.0	0.02	14.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4488)
NIR_SIR	PF01077.17	gi|313122735|ref|YP_004044662.1|	-	2.1e-47	160.3	0.0	3.5e-33	114.2	0.0	2.3	2	0	0	2	2	2	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|313122735|ref|YP_004044662.1|	-	3e-30	103.6	0.2	1.1e-13	50.6	0.0	3.5	2	1	0	2	2	2	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
DGC	PF08859.6	gi|313122735|ref|YP_004044662.1|	-	0.025	14.4	0.1	1.6	8.6	0.0	2.5	2	0	0	2	2	2	0	DGC	domain
FrhB_FdhB_C	PF04432.8	gi|313122736|ref|YP_004044663.1|	-	1.8e-28	98.9	0.0	1.8e-28	98.9	0.0	1.6	2	0	0	2	2	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.8	gi|313122736|ref|YP_004044663.1|	-	6.3e-22	77.2	0.0	1.1e-21	76.4	0.0	1.3	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_21	PF14697.1	gi|313122736|ref|YP_004044663.1|	-	2.6e-09	36.8	5.1	2.6e-09	36.8	3.5	2.0	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|313122736|ref|YP_004044663.1|	-	8.4e-09	34.6	17.2	1.7e-06	27.3	2.4	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|313122736|ref|YP_004044663.1|	-	9.3e-08	31.7	11.9	9.7e-08	31.6	6.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|313122736|ref|YP_004044663.1|	-	1.4e-07	31.6	7.1	1.4e-07	31.6	4.9	2.7	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|313122736|ref|YP_004044663.1|	-	3.2e-06	27.4	8.6	3.2e-06	27.4	6.0	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|313122736|ref|YP_004044663.1|	-	2.5e-05	24.9	12.8	0.011	16.4	0.6	4.0	4	0	0	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|313122736|ref|YP_004044663.1|	-	2.5e-05	23.8	4.0	2.5e-05	23.8	2.8	3.4	4	0	0	4	4	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|313122736|ref|YP_004044663.1|	-	6.6e-05	22.6	3.1	6.6e-05	22.6	2.2	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|313122736|ref|YP_004044663.1|	-	0.00043	20.6	12.5	0.012	16.0	0.1	3.0	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|313122736|ref|YP_004044663.1|	-	0.00079	19.7	1.0	0.012	15.9	0.1	3.1	4	0	0	4	4	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|313122736|ref|YP_004044663.1|	-	0.0015	19.0	8.3	1.2	9.6	5.8	3.1	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|313122736|ref|YP_004044663.1|	-	0.0044	17.2	12.9	0.01	16.0	3.1	3.6	4	0	0	4	4	3	2	4Fe-4S	binding	domain
TonB_2	PF13103.1	gi|313122736|ref|YP_004044663.1|	-	0.019	15.0	0.0	0.074	13.0	0.0	2.0	2	0	0	2	2	2	0	TonB	C	terminal
Fer4_8	PF13183.1	gi|313122736|ref|YP_004044663.1|	-	0.02	14.8	11.6	0.02	14.8	8.1	2.6	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|313122736|ref|YP_004044663.1|	-	0.042	14.2	12.5	0.35	11.2	2.3	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
YbjQ_1	PF01906.12	gi|313122737|ref|YP_004044664.1|	-	1.2e-32	112.4	2.7	1.4e-32	112.2	1.9	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
DUF4156	PF13698.1	gi|313122737|ref|YP_004044664.1|	-	0.042	13.7	0.3	0.086	12.7	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4156)
PKD	PF00801.15	gi|313122738|ref|YP_004044665.1|	-	1e-14	53.9	9.5	3.1e-14	52.4	6.6	1.8	1	0	0	1	1	1	1	PKD	domain
CBM_5_12	PF02839.9	gi|313122738|ref|YP_004044665.1|	-	5.4e-12	45.0	9.6	2.2e-11	43.1	6.6	2.1	1	0	0	1	1	1	1	Carbohydrate	binding	domain
Big_3_4	PF13754.1	gi|313122738|ref|YP_004044665.1|	-	0.52	10.6	24.8	0.093	13.0	13.5	2.7	2	1	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
Big_3	PF07523.7	gi|313122738|ref|YP_004044665.1|	-	3.8	7.6	12.9	1.8	8.7	5.9	2.7	2	1	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)