#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|55376229|ref|YP_134083.1|	294	DDE_Tnp_IS1595	ISXO2-like	77.7	0.0	3.5e-25	9.1e-22	2	151	121	274	120	276	0.85
gi|55376229|ref|YP_134083.1|	294	Zn_Tnp_IS1595	Transposase	39.4	1.4	1.6e-13	4.2e-10	2	45	9	55	8	56	0.91
gi|55376229|ref|YP_134083.1|	294	Zn_Tnp_IS1	InsA	24.0	5.4	9e-09	2.3e-05	6	34	26	53	25	54	0.94
gi|55376229|ref|YP_134083.1|	294	Zn_Tnp_IS1	InsA	-3.2	0.1	2.9	7.4e+03	7	15	238	246	236	252	0.47
gi|55376229|ref|YP_134083.1|	294	zf-Dof	Dof	13.4	3.4	2.5e-05	0.064	4	38	26	57	23	65	0.79
gi|55376229|ref|YP_134083.1|	294	Zn-ribbon_8	Zinc	5.8	0.1	0.0058	15	26	38	25	38	15	39	0.77
gi|55376229|ref|YP_134083.1|	294	Zn-ribbon_8	Zinc	5.8	0.1	0.0059	15	6	16	48	58	44	70	0.85
gi|55376229|ref|YP_134083.1|	294	zf-ISL3	zinc-finger	9.3	1.0	0.00069	1.8	3	19	26	42	24	44	0.87
gi|55376229|ref|YP_134083.1|	294	zf-ISL3	zinc-finger	4.4	1.1	0.023	59	40	47	46	53	44	53	0.94
gi|55376229|ref|YP_134083.1|	294	zinc_ribbon_4	zinc-ribbon	6.7	4.0	0.0027	6.9	3	36	26	58	25	58	0.86
gi|55376231|ref|YP_134085.1|	283	DDE_Tnp_1	Transposase	44.7	0.4	2e-15	1.2e-11	6	213	119	276	114	277	0.91
gi|55376231|ref|YP_134085.1|	283	DDE_Tnp_1_2	Transposase	12.6	0.1	2.3e-05	0.14	2	66	191	255	190	268	0.90
gi|55376231|ref|YP_134085.1|	283	DMP12	DNA-mimic	5.2	0.0	0.0032	19	8	35	53	79	47	85	0.72
gi|55376231|ref|YP_134085.1|	283	DMP12	DNA-mimic	4.4	0.0	0.0058	35	14	51	133	170	125	211	0.89
gi|55376232|ref|YP_134086.1|	182	Transcrip_reg	Transcriptional	12.5	0.0	4.1e-06	0.074	132	199	53	127	45	152	0.76
gi|55376237|ref|YP_134091.1|	164	NucS	Endonuclease	12.2	0.0	9.4e-06	0.085	136	175	57	94	48	103	0.74
gi|55376237|ref|YP_134091.1|	164	NERD	Nuclease-related	12.0	0.0	2.5e-05	0.22	20	56	40	81	12	108	0.81
gi|55376238|ref|YP_134092.1|	111	DUF4364	Domain	16.3	0.1	1.4e-06	0.0063	55	93	38	76	18	94	0.87
gi|55376238|ref|YP_134092.1|	111	DUF4065	Protein	14.5	0.0	1.1e-05	0.052	30	110	1	90	1	94	0.76
gi|55376238|ref|YP_134092.1|	111	DUF3653	Phage	12.8	0.2	2.2e-05	0.098	20	53	45	83	35	102	0.73
gi|55376238|ref|YP_134092.1|	111	DUF2294	Uncharacterized	12.0	0.1	3.8e-05	0.17	41	83	32	74	29	85	0.87
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	-2.4	4.1	2.6	5.9e+03	1	21	53	73	53	90	0.61
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	0.2	0.2	0.4	8.9e+02	1	9	85	93	85	98	0.86
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	-3.6	0.2	5.8	1.3e+04	3	11	106	114	105	117	0.75
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	-2.6	0.1	2.8	6.3e+03	1	11	122	132	122	141	0.79
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	-1.8	1.3	1.6	3.6e+03	1	11	175	185	175	193	0.70
gi|55376239|ref|YP_134093.1|	297	HNH	HNH	19.8	1.8	2.9e-07	0.00065	1	47	239	294	239	294	0.91
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	-0.6	0.0	0.57	1.3e+03	4	14	51	61	48	72	0.81
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	8.3	2.7	0.0009	2	2	31	81	111	80	112	0.86
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	16.4	4.7	2.8e-06	0.0062	5	38	121	155	119	160	0.86
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	7.6	5.3	0.0015	3.3	4	31	173	199	171	202	0.90
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	-0.9	0.1	0.7	1.6e+03	5	11	238	244	237	250	0.86
gi|55376239|ref|YP_134093.1|	297	VATC	Vms1-associating	-0.2	0.2	0.41	9.1e+02	6	15	284	293	282	295	0.78
gi|55376239|ref|YP_134093.1|	297	zf-MYND	MYND	13.7	1.8	2.2e-05	0.049	1	28	53	113	53	122	0.77
gi|55376239|ref|YP_134093.1|	297	zf-MYND	MYND	4.8	8.0	0.013	30	1	32	122	154	116	163	0.72
gi|55376239|ref|YP_134093.1|	297	zf-MYND	MYND	10.8	2.4	0.00018	0.39	1	29	175	202	175	210	0.89
gi|55376239|ref|YP_134093.1|	297	zf-MYND	MYND	-0.5	0.1	0.63	1.4e+03	1	5	239	243	234	253	0.70
gi|55376239|ref|YP_134093.1|	297	zf-MYND	MYND	-0.5	1.4	0.63	1.4e+03	7	17	277	288	239	292	0.42
gi|55376239|ref|YP_134093.1|	297	zf-FCS	MYM-type	9.4	2.6	0.00043	0.96	6	38	85	112	81	114	0.90
gi|55376239|ref|YP_134093.1|	297	zf-FCS	MYM-type	6.8	5.1	0.0029	6.6	3	37	119	148	118	153	0.90
gi|55376239|ref|YP_134093.1|	297	zf-FCS	MYM-type	8.1	5.6	0.0011	2.4	4	39	173	201	170	202	0.87
gi|55376239|ref|YP_134093.1|	297	Zn-ribbon_8	Zinc	3.8	0.1	0.027	61	27	34	51	58	45	62	0.78
gi|55376239|ref|YP_134093.1|	297	Zn-ribbon_8	Zinc	8.6	6.4	0.00091	2	7	34	84	127	82	133	0.67
gi|55376239|ref|YP_134093.1|	297	Zn-ribbon_8	Zinc	1.5	2.3	0.14	3.2e+02	7	16	174	183	147	199	0.74
gi|55376239|ref|YP_134093.1|	297	Zn-ribbon_8	Zinc	0.5	0.1	0.31	7e+02	7	12	238	243	235	251	0.78
gi|55376239|ref|YP_134093.1|	297	Zn-ribbon_8	Zinc	8.5	0.3	0.00095	2.1	14	37	267	292	265	294	0.85
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	12.9	0.9	3.6e-05	0.08	4	31	53	92	52	94	0.82
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	0.8	0.1	0.23	5.1e+02	24	30	122	128	113	131	0.84
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	1.3	0.3	0.16	3.6e+02	24	31	175	182	170	184	0.90
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	-1.0	0.0	0.79	1.8e+03	21	28	236	243	228	246	0.84
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	-0.7	0.0	0.64	1.4e+03	15	25	260	270	249	273	0.64
gi|55376239|ref|YP_134093.1|	297	ADK_lid	Adenylate	-1.0	0.1	0.79	1.8e+03	23	31	283	291	280	295	0.68
gi|55376239|ref|YP_134093.1|	297	zf-FLZ	zinc-finger	5.7	4.2	0.0045	10	15	47	84	115	76	121	0.79
gi|55376239|ref|YP_134093.1|	297	zf-FLZ	zinc-finger	1.8	2.8	0.073	1.6e+02	16	47	122	152	117	156	0.80
gi|55376239|ref|YP_134093.1|	297	zf-FLZ	zinc-finger	12.8	2.8	2.8e-05	0.063	16	46	175	202	170	208	0.84
gi|55376239|ref|YP_134093.1|	297	zf-FLZ	zinc-finger	-1.4	0.0	0.75	1.7e+03	15	25	283	293	272	296	0.72
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	7.4	0.1	0.0013	3	3	11	51	59	49	64	0.74
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	1.9	0.0	0.072	1.6e+02	3	10	83	90	75	94	0.62
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	2.2	0.1	0.058	1.3e+02	4	10	121	127	118	132	0.62
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	2.4	0.1	0.05	1.1e+02	1	8	171	178	171	182	0.87
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	0.7	0.2	0.17	3.8e+02	19	23	239	243	238	244	0.83
gi|55376239|ref|YP_134093.1|	297	zf-ribbon_3	zinc-ribbon	-2.1	0.1	1.3	2.8e+03	17	22	282	287	279	291	0.66
gi|55376240|ref|YP_134094.1|	287	AAA_31	AAA	79.0	0.0	2e-25	3.9e-22	2	173	8	200	7	204	0.82
gi|55376240|ref|YP_134094.1|	287	CbiA	CobQ/CobB/MinD/ParA	48.4	0.0	4.6e-16	9.1e-13	6	108	15	238	10	253	0.92
gi|55376240|ref|YP_134094.1|	287	MipZ	ATPase	25.9	0.0	2.7e-09	5.5e-06	7	50	14	57	8	98	0.82
gi|55376240|ref|YP_134094.1|	287	MipZ	ATPase	18.5	0.0	4.7e-07	0.00094	83	147	127	192	108	197	0.83
gi|55376240|ref|YP_134094.1|	287	CBP_BcsQ	Cellulose	23.2	0.0	2e-08	4e-05	10	55	16	62	8	76	0.89
gi|55376240|ref|YP_134094.1|	287	CBP_BcsQ	Cellulose	8.0	0.0	0.00091	1.8	98	147	126	176	101	192	0.80
gi|55376240|ref|YP_134094.1|	287	ArsA_ATPase	Anion-transporting	19.6	0.1	2.1e-07	0.00042	8	37	15	44	8	65	0.85
gi|55376240|ref|YP_134094.1|	287	ArsA_ATPase	Anion-transporting	2.4	0.0	0.037	73	103	133	123	153	110	165	0.81
gi|55376240|ref|YP_134094.1|	287	ParA	NUBPL	21.6	0.1	6.2e-08	0.00012	6	42	10	46	6	76	0.80
gi|55376240|ref|YP_134094.1|	287	ParA	NUBPL	-3.1	0.1	2.1	4.1e+03	100	120	133	153	130	161	0.80
gi|55376240|ref|YP_134094.1|	287	CLP1_P	mRNA	14.9	0.0	8.4e-06	0.017	4	70	18	81	16	91	0.92
gi|55376240|ref|YP_134094.1|	287	CLP1_P	mRNA	-3.1	0.0	2.9	5.7e+03	18	54	140	176	137	185	0.73
gi|55376240|ref|YP_134094.1|	287	SRP54	SRP54-type	11.3	0.1	9.5e-05	0.19	11	35	18	42	10	48	0.92
gi|55376240|ref|YP_134094.1|	287	SRP54	SRP54-type	-0.2	0.0	0.34	6.7e+02	76	96	137	157	127	175	0.80
gi|55376240|ref|YP_134094.1|	287	Fer4_NifH	4Fe-4S	11.4	0.0	7.7e-05	0.15	2	34	9	42	8	57	0.89
gi|55376241|ref|YP_134095.1|	138	Cyclase_polyket	Polyketide	12.5	0.0	7.2e-06	0.13	11	40	37	66	34	73	0.89
gi|55376242|ref|YP_134096.1|	236	zinc_ribbon_4	zinc-ribbon	4.1	0.5	0.015	44	3	9	182	188	181	191	0.74
gi|55376242|ref|YP_134096.1|	236	zinc_ribbon_4	zinc-ribbon	6.5	0.0	0.0026	7.8	3	11	209	217	205	224	0.77
gi|55376242|ref|YP_134096.1|	236	Sgf11	Sgf11	-1.7	0.2	0.75	2.2e+03	4	12	164	172	162	173	0.79
gi|55376242|ref|YP_134096.1|	236	Sgf11	Sgf11	11.4	0.4	5.8e-05	0.17	3	15	180	192	178	194	0.85
gi|55376242|ref|YP_134096.1|	236	Sgf11	Sgf11	-0.9	0.3	0.41	1.2e+03	5	10	209	214	208	215	0.83
gi|55376242|ref|YP_134096.1|	236	zf-RING_7	C4-type	7.0	0.7	0.0022	6.6	24	31	182	189	169	189	0.78
gi|55376242|ref|YP_134096.1|	236	zf-RING_7	C4-type	5.8	0.2	0.0054	16	16	29	203	214	190	215	0.65
gi|55376242|ref|YP_134096.1|	236	IBR	IBR	12.1	1.8	5.7e-05	0.17	22	50	163	193	148	199	0.82
gi|55376242|ref|YP_134096.1|	236	IBR	IBR	1.4	0.5	0.13	3.7e+02	26	46	192	216	192	218	0.58
gi|55376242|ref|YP_134096.1|	236	Mu-like_Com	Mu-like	2.3	0.6	0.039	1.2e+02	7	30	167	187	165	190	0.76
gi|55376242|ref|YP_134096.1|	236	Mu-like_Com	Mu-like	10.3	1.7	0.00012	0.35	4	30	181	214	178	221	0.82
gi|55376242|ref|YP_134096.1|	236	Zn_Tnp_IS1595	Transposase	2.2	0.3	0.059	1.8e+02	22	45	141	172	132	173	0.75
gi|55376242|ref|YP_134096.1|	236	Zn_Tnp_IS1595	Transposase	2.9	0.5	0.037	1.1e+02	17	25	180	188	179	198	0.80
gi|55376242|ref|YP_134096.1|	236	Zn_Tnp_IS1595	Transposase	4.6	0.0	0.01	31	19	25	209	215	204	222	0.81
gi|55376243|ref|YP_134097.1|	96	HTH_23	Homeodomain-like	17.2	0.0	1.3e-06	0.0033	13	40	39	67	36	81	0.89
gi|55376243|ref|YP_134097.1|	96	HTH_29	Winged	15.9	0.0	3.8e-06	0.0098	7	35	40	67	37	85	0.91
gi|55376243|ref|YP_134097.1|	96	HTH_Tnp_ISL3	Helix-turn-helix	15.0	0.1	4.7e-06	0.012	23	51	39	68	34	69	0.85
gi|55376243|ref|YP_134097.1|	96	HTH_7	Helix-turn-helix	15.2	0.0	6.4e-06	0.016	18	42	41	65	28	68	0.91
gi|55376243|ref|YP_134097.1|	96	HTH_28	Helix-turn-helix	14.9	0.0	8.4e-06	0.022	9	35	40	67	37	69	0.88
gi|55376243|ref|YP_134097.1|	96	HTH_Tnp_1	Transposase	14.8	0.0	1.1e-05	0.027	16	42	37	63	32	74	0.91
gi|55376243|ref|YP_134097.1|	96	Semialdhyde_dh	Semialdehyde	13.8	0.0	2.3e-05	0.06	72	108	26	62	4	76	0.82
gi|55376244|ref|YP_134098.1|	273	zf-C2H2_4	C2H2-type	6.2	0.4	0.0049	22	2	23	6	33	5	34	0.86
gi|55376244|ref|YP_134098.1|	273	zf-C2H2_4	C2H2-type	9.2	0.1	0.00056	2.5	3	23	49	75	47	76	0.93
gi|55376244|ref|YP_134098.1|	273	zf-3CxxC	Zinc-binding	13.3	0.7	2e-05	0.088	4	74	3	77	1	96	0.71
gi|55376244|ref|YP_134098.1|	273	DUF835	Protein	11.3	0.2	4.7e-05	0.21	61	136	180	259	171	259	0.92
gi|55376244|ref|YP_134098.1|	273	zf-H2C2_2	Zinc-finger	-0.2	0.1	0.36	1.6e+03	15	22	5	12	3	15	0.82
gi|55376244|ref|YP_134098.1|	273	zf-H2C2_2	Zinc-finger	9.7	0.2	0.00027	1.2	4	23	28	55	25	56	0.75
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	21.8	0.5	7e-08	0.00018	24	72	5	58	1	72	0.77
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	30.9	2.4	1e-10	2.6e-07	29	86	66	122	52	122	0.83
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	51.9	3.9	2.9e-17	7.3e-14	3	87	72	154	69	154	0.91
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	53.4	2.5	9.9e-18	2.5e-14	2	78	102	177	101	180	0.94
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	19.3	0.1	4.3e-07	0.0011	13	58	174	219	169	229	0.83
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	23.3	2.4	2.5e-08	6.3e-05	5	80	217	300	215	306	0.76
gi|55376245|ref|YP_134099.1|	374	HEAT_2	HEAT	5.9	0.2	0.0063	16	4	58	287	342	284	351	0.80
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	10.6	0.2	0.00022	0.55	5	26	21	43	17	43	0.84
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	5.5	0.0	0.01	25	4	26	72	94	71	94	0.92
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	19.3	0.1	3.6e-07	0.00091	3	28	102	127	100	128	0.91
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	21.0	0.0	9.8e-08	0.00025	1	28	131	158	131	160	0.94
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	-3.6	0.0	7	1.8e+04	17	29	178	190	175	191	0.80
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	4.6	0.1	0.019	49	5	28	197	220	195	222	0.86
gi|55376245|ref|YP_134099.1|	374	HEAT	HEAT	0.9	0.0	0.29	7.5e+02	4	27	250	274	248	276	0.69
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	15.0	0.0	1e-05	0.027	27	54	15	43	1	43	0.79
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	15.9	0.6	5.6e-06	0.014	24	55	99	126	86	126	0.68
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	18.7	0.0	7.1e-07	0.0018	27	55	129	157	128	157	0.96
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	2.3	0.2	0.096	2.5e+02	33	48	197	212	192	222	0.73
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	5.2	0.1	0.013	32	22	55	240	274	233	274	0.81
gi|55376245|ref|YP_134099.1|	374	HEAT_EZ	HEAT-like	5.8	0.1	0.008	21	3	44	263	298	262	306	0.76
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	0.6	0.0	0.52	1.3e+03	2	9	14	21	3	25	0.93
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	6.9	0.2	0.0049	12	1	23	33	54	33	67	0.90
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	13.3	0.1	4e-05	0.1	2	27	85	110	84	110	0.92
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	15.8	0.0	6.3e-06	0.016	1	27	115	141	115	141	0.95
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	18.9	0.8	6.4e-07	0.0016	1	23	146	168	146	172	0.92
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	1.0	0.1	0.37	9.4e+02	3	15	179	198	177	222	0.53
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	-2.4	0.1	4.8	1.2e+04	15	24	245	254	232	257	0.71
gi|55376245|ref|YP_134099.1|	374	HEAT_PBS	PBS	-1.1	0.0	1.8	4.5e+03	2	25	264	287	264	289	0.77
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	7.8	0.0	0.0013	3.4	13	36	17	41	15	42	0.91
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	-1.4	0.0	1.1	2.7e+03	23	37	79	93	72	94	0.80
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	2.8	0.0	0.052	1.3e+02	13	34	100	121	99	127	0.89
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	11.3	0.0	0.00011	0.27	11	37	129	155	125	157	0.92
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	4.5	0.0	0.015	39	16	32	196	212	182	213	0.66
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	2.3	0.0	0.071	1.8e+02	14	40	248	275	244	276	0.88
gi|55376245|ref|YP_134099.1|	374	Arm	Armadillo/beta-catenin-like	0.5	0.0	0.26	6.7e+02	11	28	281	298	279	302	0.85
gi|55376245|ref|YP_134099.1|	374	Cnd1	non-SMC	0.5	0.0	0.21	5.4e+02	60	85	18	44	9	89	0.68
gi|55376245|ref|YP_134099.1|	374	Cnd1	non-SMC	8.0	0.0	0.0011	2.7	22	51	100	129	97	132	0.86
gi|55376245|ref|YP_134099.1|	374	Cnd1	non-SMC	6.6	0.0	0.0028	7.1	22	46	131	155	129	171	0.86
gi|55376245|ref|YP_134099.1|	374	Cnd1	non-SMC	14.7	0.1	9.4e-06	0.024	27	147	198	311	192	320	0.67
gi|55376245|ref|YP_134099.1|	374	Adaptin_N	Adaptin	0.0	0.0	0.093	2.4e+02	257	292	7	42	2	48	0.67
gi|55376245|ref|YP_134099.1|	374	Adaptin_N	Adaptin	8.0	0.0	0.00037	0.94	113	191	98	168	93	187	0.88
gi|55376245|ref|YP_134099.1|	374	Adaptin_N	Adaptin	3.0	0.1	0.012	30	156	191	196	232	188	339	0.72
gi|55376247|ref|YP_134101.1|	129	Response_reg	Response	86.5	0.0	2.1e-28	1.3e-24	1	105	11	116	11	121	0.96
gi|55376247|ref|YP_134101.1|	129	OKR_DC_1_N	Orn/Lys/Arg	16.9	0.1	9.7e-07	0.0058	14	105	31	126	19	129	0.82
gi|55376247|ref|YP_134101.1|	129	MULE	MULE	11.9	0.0	3.7e-05	0.22	18	71	9	64	4	73	0.82
gi|55376247|ref|YP_134101.1|	129	MULE	MULE	0.3	0.0	0.16	9.7e+02	12	36	77	101	67	129	0.68
gi|55376248|ref|YP_134102.1|	199	Phage_integrase	Phage	38.6	0.0	1e-13	9.1e-10	2	168	14	182	13	185	0.86
gi|55376248|ref|YP_134102.1|	199	TetR_C_15	Tetracyclin	2.1	0.0	0.036	3.2e+02	25	66	12	53	5	55	0.86
gi|55376248|ref|YP_134102.1|	199	TetR_C_15	Tetracyclin	10.3	0.6	0.0001	0.93	19	70	114	165	108	168	0.89
gi|55376250|ref|YP_134104.1|	104	MciZ	Mother	-1.1	0.0	0.096	1.7e+03	3	12	56	65	55	66	0.84
gi|55376250|ref|YP_134104.1|	104	MciZ	Mother	10.3	0.1	2.6e-05	0.47	16	27	85	96	84	97	0.93
gi|55376251|ref|YP_134105.1|	131	TrmB	Sugar-specific	-1.9	0.0	0.89	3.2e+03	31	41	5	15	2	32	0.65
gi|55376251|ref|YP_134105.1|	131	TrmB	Sugar-specific	20.3	0.0	1.1e-07	0.00038	15	66	59	111	55	113	0.88
gi|55376251|ref|YP_134105.1|	131	MarR	MarR	-2.6	0.0	1.5	5.3e+03	19	32	12	25	5	26	0.72
gi|55376251|ref|YP_134105.1|	131	MarR	MarR	16.2	0.0	2.1e-06	0.0075	19	57	68	106	55	107	0.89
gi|55376251|ref|YP_134105.1|	131	MarR_2	MarR	-3.3	0.0	2.4	8.5e+03	23	36	12	25	6	26	0.68
gi|55376251|ref|YP_134105.1|	131	MarR_2	MarR	15.6	0.0	3e-06	0.011	13	60	57	105	53	106	0.85
gi|55376251|ref|YP_134105.1|	131	HTH_Crp_2	Crp-like	14.5	0.0	7.5e-06	0.027	21	43	66	88	41	118	0.72
gi|55376251|ref|YP_134105.1|	131	HTH_11	HTH	12.1	0.0	4.1e-05	0.15	19	39	70	90	63	100	0.83
gi|55376252|ref|YP_134106.1|	134	HTH_20	Helix-turn-helix	20.7	0.0	1.2e-07	0.00031	7	55	49	97	44	103	0.92
gi|55376252|ref|YP_134106.1|	134	HTH_1	Bacterial	14.4	0.0	1.1e-05	0.027	3	37	54	90	52	93	0.93
gi|55376252|ref|YP_134106.1|	134	HTH_IclR	IclR	12.5	0.0	3.7e-05	0.095	6	51	55	99	53	100	0.94
gi|55376252|ref|YP_134106.1|	134	HTH_24	Winged	11.9	0.0	4.8e-05	0.12	3	47	52	96	50	97	0.93
gi|55376252|ref|YP_134106.1|	134	HTH_27	Winged	-2.4	0.0	2.8	7.1e+03	17	31	27	41	21	42	0.77
gi|55376252|ref|YP_134106.1|	134	HTH_27	Winged	12.2	0.0	7.9e-05	0.2	6	52	55	100	50	110	0.85
gi|55376252|ref|YP_134106.1|	134	TrmB	Sugar-specific	11.8	0.0	6.4e-05	0.16	11	59	55	109	43	118	0.83
gi|55376252|ref|YP_134106.1|	134	HTH_29	Winged	-1.4	0.2	0.98	2.5e+03	26	61	16	26	9	28	0.49
gi|55376252|ref|YP_134106.1|	134	HTH_29	Winged	10.8	0.0	0.00015	0.39	5	40	58	94	54	111	0.75
gi|55376253|ref|YP_134107.1|	122	PadR	Transcriptional	21.9	0.0	6.9e-08	0.00012	11	74	43	99	34	100	0.86
gi|55376253|ref|YP_134107.1|	122	TrmB	Sugar-specific	16.4	0.0	3.6e-06	0.0064	31	58	55	83	44	93	0.75
gi|55376253|ref|YP_134107.1|	122	HTH_27	Winged	16.1	0.0	6.4e-06	0.012	28	68	56	94	53	94	0.85
gi|55376253|ref|YP_134107.1|	122	Replic_Relax	Replication-relaxation	-3.3	0.1	4.3	7.7e+03	105	113	19	31	11	43	0.53
gi|55376253|ref|YP_134107.1|	122	Replic_Relax	Replication-relaxation	16.3	0.0	4.3e-06	0.0077	22	75	59	104	48	121	0.73
gi|55376253|ref|YP_134107.1|	122	MarR_2	MarR	12.7	0.0	5.1e-05	0.091	2	53	20	78	19	87	0.83
gi|55376253|ref|YP_134107.1|	122	MarR_2	MarR	-0.5	0.0	0.67	1.2e+03	2	13	89	100	88	116	0.77
gi|55376253|ref|YP_134107.1|	122	FUR	Ferric	15.2	0.0	9.7e-06	0.017	27	73	45	91	19	114	0.83
gi|55376253|ref|YP_134107.1|	122	HTH_36	Helix-turn-helix	-2.3	0.0	2.4	4.4e+03	3	14	21	32	21	41	0.67
gi|55376253|ref|YP_134107.1|	122	HTH_36	Helix-turn-helix	13.3	0.0	3.4e-05	0.06	33	55	54	76	53	76	0.94
gi|55376253|ref|YP_134107.1|	122	DUF4364	Domain	13.5	0.0	2.5e-05	0.045	38	92	65	120	61	122	0.87
gi|55376253|ref|YP_134107.1|	122	SgrR_N	Sugar	7.2	0.1	0.003	5.5	29	52	21	44	14	47	0.89
gi|55376253|ref|YP_134107.1|	122	SgrR_N	Sugar	3.7	0.0	0.038	68	29	50	56	77	49	90	0.91
gi|55376253|ref|YP_134107.1|	122	Iron_traffic	Bacterial	11.3	0.0	0.00012	0.21	26	69	24	70	8	78	0.80
gi|55376255|ref|YP_134109.1|	512	AAA_29	P-loop	13.4	0.0	8.4e-06	0.05	18	43	100	125	91	133	0.78
gi|55376255|ref|YP_134109.1|	512	zf-CCHC_3	Zinc	13.3	0.0	1e-05	0.06	12	22	292	302	291	314	0.77
gi|55376255|ref|YP_134109.1|	512	zf-CCHC_3	Zinc	-4.1	0.1	2.7	1.6e+04	30	37	346	353	343	355	0.80
gi|55376255|ref|YP_134109.1|	512	AAA_30	AAA	10.4	0.0	6.4e-05	0.38	13	50	99	137	94	145	0.79
gi|55376255|ref|YP_134109.1|	512	AAA_30	AAA	-1.8	0.0	0.36	2.2e+03	90	101	273	284	246	289	0.74
gi|55376256|ref|YP_134110.1|	156	OrfB_Zn_ribbon	Putative	13.7	0.1	9.6e-06	0.043	26	55	43	79	36	94	0.89
gi|55376256|ref|YP_134110.1|	156	UPF0167	Uncharacterised	13.8	0.7	8.7e-06	0.039	20	60	45	85	36	135	0.82
gi|55376256|ref|YP_134110.1|	156	zf-dskA_traR	Prokaryotic	12.2	0.7	3e-05	0.13	5	31	46	77	42	79	0.78
gi|55376256|ref|YP_134110.1|	156	DZR	Double	11.7	1.7	4.3e-05	0.19	14	38	47	81	31	88	0.86
gi|55376257|ref|YP_134111.1|	85	R2K_2	ATP-grasp	12.6	0.0	1e-05	0.094	38	86	20	70	10	77	0.83
gi|55376257|ref|YP_134111.1|	85	DUF2080	Putative	11.2	0.0	2.7e-05	0.24	25	36	10	21	4	23	0.86
gi|55376259|ref|YP_134113.1|	424	DDE_Tnp_1	Transposase	107.0	0.3	1.7e-34	1e-30	2	213	105	342	104	343	0.90
gi|55376259|ref|YP_134113.1|	424	DDE_Tnp_1_4	Transposase	12.9	0.0	4e-06	0.024	223	354	180	328	168	355	0.68
gi|55376259|ref|YP_134113.1|	424	DDE_Tnp_2	Archaeal	11.6	0.1	2e-05	0.12	224	287	248	315	198	348	0.76
gi|55376260|ref|YP_134114.1|	392	Phage_int_SAM_5	Phage	1.9	0.0	0.016	2.8e+02	48	81	79	116	78	121	0.84
gi|55376260|ref|YP_134114.1|	392	Phage_int_SAM_5	Phage	10.9	0.0	2.4e-05	0.44	66	93	156	183	143	189	0.91
gi|55376260|ref|YP_134114.1|	392	Phage_int_SAM_5	Phage	-1.2	0.0	0.15	2.6e+03	49	60	344	355	343	373	0.76
gi|55376262|ref|YP_134116.1|	171	Pilin_N	Archaeal	44.1	0.8	3.2e-15	2.9e-11	12	79	1	70	1	72	0.87
gi|55376262|ref|YP_134116.1|	171	Pilin_N	Archaeal	-1.8	0.0	0.71	6.4e+03	57	64	127	134	104	159	0.68
gi|55376262|ref|YP_134116.1|	171	Arch_flagellin	Archaebacterial	17.4	2.6	4.2e-07	0.0037	12	153	4	154	1	164	0.77
gi|55376263|ref|YP_134117.1|	1134	Rad50_zn_hook	Rad50	15.9	0.2	9.2e-07	0.0083	11	37	16	42	16	52	0.86
gi|55376263|ref|YP_134117.1|	1134	Zn_Tnp_IS91	Transposase	11.8	1.6	2e-05	0.18	36	75	2	42	1	47	0.90
gi|55376263|ref|YP_134117.1|	1134	Zn_Tnp_IS91	Transposase	-3.2	0.2	0.98	8.8e+03	59	68	1085	1094	1083	1101	0.56
gi|55376266|ref|YP_134120.1|	99	MRP-L20	Mitochondrial	13.6	0.0	3.1e-06	0.055	83	113	34	64	5	80	0.76
gi|55376268|ref|YP_134122.1|	104	PadR	Transcriptional	50.4	0.1	8.3e-17	1.6e-13	5	73	21	82	14	84	0.90
gi|55376268|ref|YP_134122.1|	104	HTH_45	Winged	18.0	0.0	1e-06	0.0021	31	67	42	83	37	90	0.86
gi|55376268|ref|YP_134122.1|	104	DUF4364	Domain	16.5	0.0	2.6e-06	0.0053	31	71	42	83	38	92	0.85
gi|55376268|ref|YP_134122.1|	104	DUF1495	Winged	15.5	0.0	5.6e-06	0.011	53	85	48	80	43	84	0.89
gi|55376268|ref|YP_134122.1|	104	RTP	Replication	15.3	0.0	1.2e-05	0.023	16	89	19	82	13	92	0.76
gi|55376268|ref|YP_134122.1|	104	HxlR	HxlR-like	14.6	0.0	1.1e-05	0.022	28	71	39	80	34	95	0.86
gi|55376268|ref|YP_134122.1|	104	HTH_27	Winged	13.7	0.0	3.3e-05	0.066	38	68	50	78	41	78	0.92
gi|55376268|ref|YP_134122.1|	104	FUR	Ferric	13.3	0.0	3.5e-05	0.069	40	74	42	76	12	88	0.89
gi|55376268|ref|YP_134122.1|	104	BMFP	Membrane	11.7	0.0	0.00014	0.28	40	74	54	88	44	90	0.84
gi|55376269|ref|YP_134123.1|	226	HTH_45	Winged	15.0	0.0	5e-06	0.018	29	68	43	82	39	89	0.86
gi|55376269|ref|YP_134123.1|	226	MarR_2	MarR	12.9	0.4	2.1e-05	0.076	4	56	8	68	6	72	0.86
gi|55376269|ref|YP_134123.1|	226	Mrr_N	Mrr	12.4	0.1	3.7e-05	0.13	21	85	12	80	7	82	0.68
gi|55376269|ref|YP_134123.1|	226	RbsD_FucU	RbsD	6.2	0.1	0.0038	14	6	34	9	37	5	70	0.78
gi|55376269|ref|YP_134123.1|	226	RbsD_FucU	RbsD	5.6	0.1	0.0058	21	22	52	93	126	86	171	0.82
gi|55376269|ref|YP_134123.1|	226	HTH_1	Bacterial	3.2	0.1	0.024	86	6	21	14	29	11	36	0.89
gi|55376269|ref|YP_134123.1|	226	HTH_1	Bacterial	5.7	0.1	0.0039	14	32	60	52	77	41	77	0.80
gi|55376269|ref|YP_134123.1|	226	HTH_1	Bacterial	-0.7	0.1	0.41	1.5e+03	16	25	80	89	78	93	0.85
gi|55376269|ref|YP_134123.1|	226	HTH_1	Bacterial	-0.3	0.1	0.3	1.1e+03	15	30	106	121	104	148	0.74
gi|55376270|ref|YP_134124.1|	79	HTH_24	Winged	28.4	0.0	7.3e-10	8.7e-07	18	47	25	54	7	55	0.83
gi|55376270|ref|YP_134124.1|	79	MarR_2	MarR	29.5	0.0	4.2e-10	5.1e-07	10	54	13	57	12	63	0.90
gi|55376270|ref|YP_134124.1|	79	HTH_20	Helix-turn-helix	24.0	0.0	2.5e-08	3e-05	20	60	20	60	12	61	0.85
gi|55376270|ref|YP_134124.1|	79	HTH_11	HTH	23.1	0.0	4.4e-08	5.2e-05	4	43	12	52	11	59	0.92
gi|55376270|ref|YP_134124.1|	79	HTH_27	Winged	16.9	0.0	5.4e-06	0.0065	5	54	10	60	8	72	0.80
gi|55376270|ref|YP_134124.1|	79	GntR	Bacterial	16.1	0.0	5.6e-06	0.0067	16	58	17	58	11	64	0.88
gi|55376270|ref|YP_134124.1|	79	Fe_dep_repress	Iron	15.6	0.0	1.2e-05	0.014	22	54	24	56	20	61	0.91
gi|55376270|ref|YP_134124.1|	79	HTH_IclR	IclR	14.0	0.0	2.7e-05	0.032	8	49	13	55	12	58	0.89
gi|55376270|ref|YP_134124.1|	79	MarR	MarR	13.9	0.0	3.2e-05	0.039	9	48	14	55	12	59	0.82
gi|55376270|ref|YP_134124.1|	79	TBPIP	TBPIP/Hop2	13.6	0.0	4e-05	0.048	29	58	35	64	27	69	0.85
gi|55376270|ref|YP_134124.1|	79	HTH_AsnC-type	AsnC-type	12.9	0.0	6.2e-05	0.074	18	41	25	48	7	49	0.81
gi|55376270|ref|YP_134124.1|	79	PadR	Transcriptional	13.2	0.0	5.6e-05	0.067	33	74	40	77	28	78	0.82
gi|55376270|ref|YP_134124.1|	79	HTH_Crp_2	Crp-like	13.2	0.0	5.6e-05	0.067	22	54	25	57	10	73	0.87
gi|55376270|ref|YP_134124.1|	79	Mnd1	Mnd1	12.5	0.0	0.00011	0.14	30	57	39	67	29	70	0.82
gi|55376270|ref|YP_134124.1|	79	TrmB	Sugar-specific	11.5	0.0	0.00017	0.2	23	57	25	59	11	71	0.87
gi|55376272|ref|YP_134126.1|	270	Cas_Cas6	CRISPR	74.7	0.0	5.9e-25	1.1e-20	2	146	84	252	83	252	0.86
gi|55376273|ref|YP_134127.1|	710	Cas_TM1802	CRISPR-associated	27.2	0.0	8.8e-11	1.6e-06	94	281	132	318	67	359	0.76
gi|55376273|ref|YP_134127.1|	710	Cas_TM1802	CRISPR-associated	47.2	0.0	8e-17	1.4e-12	399	607	448	690	440	691	0.72
gi|55376274|ref|YP_134128.1|	357	Cas_Cas7	CRISPR-associated	158.1	0.1	1.6e-50	2.9e-46	2	252	11	289	10	289	0.82
gi|55376275|ref|YP_134129.1|	265	Cas_Cas5d	CRISPR-associated	36.0	0.0	3.5e-13	6.3e-09	1	111	21	143	21	209	0.75
gi|55376275|ref|YP_134129.1|	265	Cas_Cas5d	CRISPR-associated	-1.9	0.0	0.15	2.6e+03	89	109	224	244	189	246	0.83
gi|55376276|ref|YP_134130.1|	893	ResIII	Type	28.9	0.0	2.8e-10	1e-06	26	169	327	495	297	497	0.81
gi|55376276|ref|YP_134130.1|	893	HD_6	HD	27.8	0.0	6.9e-10	2.5e-06	16	143	42	181	32	245	0.71
gi|55376276|ref|YP_134130.1|	893	DEAD	DEAD/DEAH	25.4	0.0	2.9e-09	1e-05	13	170	324	496	311	500	0.73
gi|55376276|ref|YP_134130.1|	893	HD	HD	14.5	0.1	8.9e-06	0.032	27	117	72	183	47	188	0.73
gi|55376276|ref|YP_134130.1|	893	HD	HD	-2.8	0.0	1.9	7e+03	54	86	574	610	566	630	0.67
gi|55376276|ref|YP_134130.1|	893	LppA	Lipoprotein	-0.1	0.1	0.22	7.7e+02	21	50	163	192	155	206	0.90
gi|55376276|ref|YP_134130.1|	893	LppA	Lipoprotein	2.6	0.0	0.033	1.2e+02	87	118	465	496	457	498	0.86
gi|55376276|ref|YP_134130.1|	893	LppA	Lipoprotein	5.0	0.0	0.0057	21	92	120	800	827	790	833	0.87
gi|55376277|ref|YP_134131.1|	190	Cas_Cas4	Domain	160.1	0.0	7.6e-51	4.6e-47	1	162	32	189	32	189	0.99
gi|55376277|ref|YP_134131.1|	190	PDDEXK_1	PD-(D/E)XK	23.1	0.1	1e-08	5.9e-05	71	254	18	187	2	188	0.60
gi|55376277|ref|YP_134131.1|	190	Exo5	Exonuclease	3.9	0.0	0.0052	31	10	66	25	83	17	94	0.84
gi|55376277|ref|YP_134131.1|	190	Exo5	Exonuclease	6.2	0.0	0.001	6.2	178	204	98	124	88	134	0.83
gi|55376277|ref|YP_134131.1|	190	Exo5	Exonuclease	0.3	0.5	0.062	3.7e+02	350	366	172	188	165	189	0.85
gi|55376278|ref|YP_134132.1|	330	Cas_Cas1	CRISPR	296.7	0.0	1.6e-92	1.4e-88	1	283	5	285	5	285	0.99
gi|55376278|ref|YP_134132.1|	330	Vac_Fusion	Chordopoxvirus	8.0	0.2	0.00023	2.1	32	41	12	21	10	23	0.94
gi|55376278|ref|YP_134132.1|	330	Vac_Fusion	Chordopoxvirus	1.4	0.0	0.027	2.5e+02	27	42	131	146	109	148	0.80
gi|55376279|ref|YP_134133.1|	87	CRISPR_Cas2	CRISPR	64.5	0.1	1.2e-21	7.3e-18	1	74	1	71	1	78	0.94
gi|55376279|ref|YP_134133.1|	87	Cas_Cas2CT1978	CRISPR-associated	19.3	0.0	1.5e-07	0.0009	16	75	21	80	5	86	0.90
gi|55376279|ref|YP_134133.1|	87	YolD	YolD-like	12.5	0.0	2e-05	0.12	13	58	27	72	16	78	0.82