#                                                                       --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                   accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------         -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
DUF998	PF06197.8	gi|55376108|ref|YP_133965.1|	-	0.028	13.7	8.0	0.068	12.4	1.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF998)
SUR7	PF06687.7	gi|55376108|ref|YP_133965.1|	-	0.04	13.4	0.4	0.088	12.3	0.0	1.6	2	0	0	2	2	2	0	SUR7/PalI	family
DUF2721	PF11026.3	gi|55376108|ref|YP_133965.1|	-	0.59	9.7	4.4	0.49	10.0	1.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
DUF4231	PF14015.1	gi|55376108|ref|YP_133965.1|	-	4.8	7.2	10.2	16	5.5	0.4	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Pox_A14	PF05767.7	gi|55376108|ref|YP_133965.1|	-	5.9	6.9	6.5	11	6.0	0.0	2.8	3	1	0	3	3	3	0	Poxvirus	virion	envelope	protein	A14
zf-H2C2_5	PF13909.1	gi|55376111|ref|YP_133968.1|	-	0.031	14.5	0.3	0.069	13.4	0.2	1.6	1	1	0	1	1	1	0	C2H2-type	zinc-finger	domain
DUF1194	PF06707.6	gi|55376111|ref|YP_133968.1|	-	0.046	12.6	0.0	0.06	12.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1194)
PEP-utilisers_N	PF05524.8	gi|55376113|ref|YP_133970.1|	-	0.28	10.9	2.5	0.73	9.6	0.2	2.2	1	1	1	2	2	2	0	PEP-utilising	enzyme,	N-terminal
AzlD	PF05437.7	gi|55376114|ref|YP_133971.1|	-	0.082	12.8	0.2	0.11	12.4	0.1	1.1	1	0	0	1	1	1	0	Branched-chain	amino	acid	transport	protein	(AzlD)
DUF3917	PF13055.1	gi|55376114|ref|YP_133971.1|	-	0.092	12.9	0.3	0.12	12.6	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3917)
HTH_12	PF08461.5	gi|55376115|ref|YP_133972.1|	-	0.0004	20.0	0.0	0.00076	19.1	0.0	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_32	PF13565.1	gi|55376115|ref|YP_133972.1|	-	0.0008	20.1	0.0	0.0016	19.2	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
SAP30_Sin3_bdg	PF13867.1	gi|55376115|ref|YP_133972.1|	-	0.068	13.0	0.1	2	8.3	0.0	2.2	1	1	1	2	2	2	0	Sin3	binding	region	of	histone	deacetylase	complex	subunit	SAP30
PqqD	PF05402.7	gi|55376115|ref|YP_133972.1|	-	0.084	12.8	0.2	0.24	11.4	0.0	1.9	2	0	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
tRNA_anti-codon	PF01336.20	gi|55376116|ref|YP_133973.1|	-	6.8e-08	32.2	0.1	0.0054	16.5	0.1	2.3	2	0	0	2	2	2	2	OB-fold	nucleic	acid	binding	domain
DUF4131	PF13567.1	gi|55376116|ref|YP_133973.1|	-	0.029	13.7	0.0	0.11	11.9	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
zf-C3HC4_3	PF13920.1	gi|55376116|ref|YP_133973.1|	-	0.049	13.2	1.3	0.08	12.6	0.9	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
PRC	PF05239.11	gi|55376116|ref|YP_133973.1|	-	0.062	13.1	0.4	0.14	12.0	0.2	1.7	1	0	0	1	1	1	0	PRC-barrel	domain
zf-RING_5	PF14634.1	gi|55376116|ref|YP_133973.1|	-	0.097	12.4	1.1	0.15	11.8	0.8	1.3	1	0	0	1	1	1	0	zinc-RING	finger	domain
DUF4327	PF14217.1	gi|55376117|ref|YP_133974.1|	-	0.094	12.5	0.1	0.21	11.4	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4327)
DASH_Dam1	PF08653.5	gi|55376118|ref|YP_133975.1|	-	0.079	12.7	0.1	0.17	11.7	0.0	1.6	1	0	0	1	1	1	0	DASH	complex	subunit	Dam1
Flg_hook	PF02120.11	gi|55376118|ref|YP_133975.1|	-	0.082	12.5	0.2	13	5.5	0.0	2.7	2	0	0	2	2	2	0	Flagellar	hook-length	control	protein	FliK
DUF4164	PF13747.1	gi|55376118|ref|YP_133975.1|	-	0.083	13.0	2.6	0.51	10.4	1.8	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4164)
Tropomyosin_1	PF12718.2	gi|55376118|ref|YP_133975.1|	-	0.096	12.5	0.9	0.15	11.8	0.6	1.3	1	0	0	1	1	1	0	Tropomyosin	like
PepSY_TM_2	PF13703.1	gi|55376119|ref|YP_133976.1|	-	2.9	8.1	6.7	9.8	6.4	4.3	2.1	1	1	0	1	1	1	0	PepSY-associated	TM	helix
PadR	PF03551.9	gi|55376122|ref|YP_133978.1|	-	1.1e-05	25.0	0.0	1.5e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|55376122|ref|YP_133978.1|	-	4.8e-05	23.5	0.3	8.6e-05	22.7	0.2	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4364	PF14277.1	gi|55376122|ref|YP_133978.1|	-	0.00026	20.6	0.0	0.00034	20.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
MarR_2	PF12802.2	gi|55376122|ref|YP_133978.1|	-	0.0016	18.0	0.1	0.0022	17.6	0.1	1.3	1	0	0	1	1	1	1	MarR	family
DUF505	PF04458.7	gi|55376122|ref|YP_133978.1|	-	0.0023	16.1	0.0	0.0026	15.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
PaaX	PF07848.7	gi|55376122|ref|YP_133978.1|	-	0.0042	17.0	0.1	0.0058	16.6	0.1	1.3	1	0	0	1	1	1	1	PaaX-like	protein
HTH_34	PF13601.1	gi|55376122|ref|YP_133978.1|	-	0.005	16.8	0.0	0.0066	16.4	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|55376122|ref|YP_133978.1|	-	0.0054	16.4	0.0	0.008	15.8	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|55376122|ref|YP_133978.1|	-	0.0062	16.6	0.0	0.0093	16.0	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_20	PF12840.2	gi|55376122|ref|YP_133978.1|	-	0.0066	16.2	0.1	0.011	15.4	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Ribosomal_S19e	PF01090.14	gi|55376122|ref|YP_133978.1|	-	0.012	15.0	0.0	0.017	14.5	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_45	PF14947.1	gi|55376122|ref|YP_133978.1|	-	0.015	15.1	0.0	0.021	14.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix
Replic_Relax	PF13814.1	gi|55376122|ref|YP_133978.1|	-	0.017	14.9	0.0	0.021	14.6	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
GntR	PF00392.16	gi|55376122|ref|YP_133978.1|	-	0.029	13.7	0.1	0.049	13.0	0.1	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_DeoR	PF08220.7	gi|55376122|ref|YP_133978.1|	-	0.036	13.6	0.1	0.069	12.6	0.0	1.5	1	1	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Mrr_N	PF14338.1	gi|55376122|ref|YP_133978.1|	-	0.038	14.0	0.0	0.054	13.5	0.0	1.3	1	0	0	1	1	1	0	Mrr	N-terminal	domain
HTH_11	PF08279.7	gi|55376122|ref|YP_133978.1|	-	0.039	13.5	0.0	0.066	12.8	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
HxlR	PF01638.12	gi|55376122|ref|YP_133978.1|	-	0.052	13.1	0.0	0.074	12.6	0.0	1.3	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
AAA_33	PF13671.1	gi|55376123|ref|YP_133980.1|	-	0.00078	19.3	0.0	0.41	10.5	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
zf-CCHC_3	PF13917.1	gi|55376123|ref|YP_133980.1|	-	0.11	12.3	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	Zinc	knuckle
AAA_22	PF13401.1	gi|55376123|ref|YP_133980.1|	-	0.19	11.8	0.0	0.37	10.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Terminase_GpA	PF05876.7	gi|55376125|ref|YP_133982.1|	-	0.00063	18.2	0.2	0.00063	18.2	0.2	1.0	1	0	0	1	1	1	1	Phage	terminase	large	subunit	(GpA)
zf-dskA_traR	PF01258.12	gi|55376125|ref|YP_133982.1|	-	0.014	15.0	3.5	0.12	12.1	0.1	2.1	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Zn-ribbon_8	PF09723.5	gi|55376125|ref|YP_133982.1|	-	0.018	15.0	1.1	1.1	9.3	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|55376125|ref|YP_133982.1|	-	0.035	13.9	1.0	0.12	12.2	0.7	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_5	PF13719.1	gi|55376125|ref|YP_133982.1|	-	0.052	13.1	0.3	6.3	6.4	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
FANCL_C	PF11793.3	gi|55376125|ref|YP_133982.1|	-	0.052	13.5	0.9	4.3	7.3	0.1	2.1	1	1	1	2	2	2	0	FANCL	C-terminal	domain
PADR1	PF08063.7	gi|55376125|ref|YP_133982.1|	-	0.092	12.1	0.3	9.4	5.7	0.1	2.1	2	0	0	2	2	2	0	PADR1	(NUC008)	domain
zf-C2H2	PF00096.21	gi|55376125|ref|YP_133982.1|	-	0.096	13.0	0.8	0.55	10.6	0.0	2.0	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zinc_ribbon_4	PF13717.1	gi|55376125|ref|YP_133982.1|	-	0.1	12.2	0.3	8.2	6.2	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Opy2	PF09463.5	gi|55376125|ref|YP_133982.1|	-	0.12	12.5	1.0	9.3	6.4	0.1	2.1	2	0	0	2	2	2	0	Opy2	protein
DUF329	PF03884.9	gi|55376125|ref|YP_133982.1|	-	0.13	11.8	1.9	5.3	6.6	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
zinc-ribbons_6	PF07191.7	gi|55376125|ref|YP_133982.1|	-	0.15	11.8	0.3	8.2	6.3	0.0	2.0	2	0	0	2	2	2	0	zinc-ribbons
zf-LITAF-like	PF10601.4	gi|55376125|ref|YP_133982.1|	-	0.22	11.4	1.4	4.1	7.3	0.1	2.1	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|55376125|ref|YP_133982.1|	-	0.52	9.9	2.4	4.7	6.9	1.6	2.0	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
zf-C4_Topoisom	PF01396.14	gi|55376125|ref|YP_133982.1|	-	0.53	9.8	2.2	4.2	6.9	0.1	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
UPF0547	PF10571.4	gi|55376125|ref|YP_133982.1|	-	0.6	9.8	6.8	2.9	7.6	0.2	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF35_N	PF12172.3	gi|55376125|ref|YP_133982.1|	-	1.6	8.7	4.4	0.99	9.4	0.4	2.1	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_2	PF13240.1	gi|55376125|ref|YP_133982.1|	-	1.9	8.0	0.1	1.9	8.0	0.1	2.3	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|55376125|ref|YP_133982.1|	-	2.9	7.2	4.9	26	4.1	3.6	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
Phage_integrase	PF00589.17	gi|55376126|ref|YP_133983.1|	-	1.2e-12	47.8	0.0	4.7e-12	45.9	0.0	2.0	2	1	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|55376126|ref|YP_133983.1|	-	3.7e-07	30.2	0.1	1.2e-06	28.5	0.1	1.9	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|55376126|ref|YP_133983.1|	-	0.0014	18.9	0.0	0.003	17.8	0.0	1.6	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
DUF3435	PF11917.3	gi|55376126|ref|YP_133983.1|	-	0.071	11.8	0.0	0.35	9.5	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3435)
AAA_22	PF13401.1	gi|55376127|ref|YP_133984.1|	-	0.0014	18.7	0.0	0.0044	17.1	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
Cdc6_C	PF09079.6	gi|55376130|ref|YP_133987.1|	-	4.4e-17	61.5	0.0	1.3e-16	60.0	0.0	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|55376130|ref|YP_133987.1|	-	5.1e-11	42.8	0.0	1.2e-10	41.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|55376130|ref|YP_133987.1|	-	1.4e-10	41.4	0.9	1.7e-09	37.9	0.0	2.8	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|55376130|ref|YP_133987.1|	-	2e-05	24.7	0.4	0.00029	21.0	0.1	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|55376130|ref|YP_133987.1|	-	4.8e-05	23.1	0.2	0.0013	18.5	0.1	2.5	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|55376130|ref|YP_133987.1|	-	6.7e-05	22.6	0.0	0.00016	21.4	0.0	1.8	2	1	0	2	2	1	1	Archaeal	ATPase
NACHT	PF05729.7	gi|55376130|ref|YP_133987.1|	-	0.00015	21.4	0.0	0.00051	19.7	0.0	1.8	2	1	0	2	2	2	1	NACHT	domain
DUF815	PF05673.8	gi|55376130|ref|YP_133987.1|	-	0.00042	19.3	0.0	0.00083	18.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.11	gi|55376130|ref|YP_133987.1|	-	0.0013	18.0	0.2	0.13	11.4	0.0	2.2	2	0	0	2	2	2	1	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|55376130|ref|YP_133987.1|	-	0.0018	17.8	0.1	0.0053	16.2	0.0	1.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_2	PF07724.9	gi|55376130|ref|YP_133987.1|	-	0.0062	16.4	0.0	0.013	15.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
RNA_helicase	PF00910.17	gi|55376130|ref|YP_133987.1|	-	0.013	15.6	0.1	0.03	14.5	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_31	PF13614.1	gi|55376130|ref|YP_133987.1|	-	0.015	15.1	0.1	0.13	12.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|55376130|ref|YP_133987.1|	-	0.043	14.1	0.0	0.096	12.9	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|55376130|ref|YP_133987.1|	-	0.045	14.0	0.0	0.14	12.4	0.0	1.9	1	0	0	1	1	1	0	ABC	transporter
DAP3	PF10236.4	gi|55376130|ref|YP_133987.1|	-	0.087	11.7	0.0	0.19	10.6	0.0	1.5	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
DUF2791	PF10923.3	gi|55376130|ref|YP_133987.1|	-	0.091	11.3	0.0	0.16	10.5	0.0	1.3	1	0	0	1	1	1	0	P-loop	Domain	of	unknown	function	(DUF2791)
Mg_chelatase	PF01078.16	gi|55376130|ref|YP_133987.1|	-	0.12	11.5	0.0	0.36	9.9	0.0	1.7	1	1	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF2075	PF09848.4	gi|55376130|ref|YP_133987.1|	-	0.13	11.1	0.0	0.18	10.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_17	PF13207.1	gi|55376130|ref|YP_133987.1|	-	0.16	12.8	1.8	0.35	11.6	0.9	2.1	1	1	0	1	1	1	0	AAA	domain
LexA_DNA_bind	PF01726.11	gi|55376131|ref|YP_133988.1|	-	4.7e-06	26.0	0.0	5.4	6.6	0.0	4.5	5	0	0	5	5	5	1	LexA	DNA	binding	domain
Ribosomal_L29	PF00831.18	gi|55376131|ref|YP_133988.1|	-	9.5e-05	22.0	1.9	2	8.1	0.0	4.0	4	0	0	4	4	4	1	Ribosomal	L29	protein
Sigma70_r3	PF04539.11	gi|55376131|ref|YP_133988.1|	-	0.00054	19.7	7.8	3.4	7.6	0.1	4.2	4	0	0	4	4	4	2	Sigma-70	region	3
Packaging_FI	PF14000.1	gi|55376131|ref|YP_133988.1|	-	0.0048	17.0	5.4	3.6	7.7	0.0	4.0	4	0	0	4	4	4	1	DNA	packaging	protein	FI
GRAS	PF03514.9	gi|55376131|ref|YP_133988.1|	-	0.041	12.5	0.0	6.9	5.2	0.0	3.1	3	0	0	3	3	3	0	GRAS	domain	family
KfrA_N	PF11740.3	gi|55376131|ref|YP_133988.1|	-	0.044	14.2	1.8	13	6.2	0.1	3.2	1	1	2	3	3	3	0	Plasmid	replication	region	DNA-binding	N-term
DUF964	PF06133.6	gi|55376131|ref|YP_133988.1|	-	0.068	13.1	0.1	23	5.0	0.0	3.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF964)
EndoU_bacteria	PF14436.1	gi|55376131|ref|YP_133988.1|	-	0.072	12.9	0.0	0.93	9.3	0.0	2.2	2	0	0	2	2	2	0	Bacterial	EndoU	nuclease
IF2_N	PF04760.10	gi|55376131|ref|YP_133988.1|	-	0.073	12.7	0.0	17	5.1	0.0	3.6	4	0	0	4	4	4	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF900	PF05990.7	gi|55376131|ref|YP_133988.1|	-	0.089	12.0	0.0	0.22	10.8	0.0	1.6	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
Clr5	PF14420.1	gi|55376131|ref|YP_133988.1|	-	0.27	11.1	4.3	4.8	7.1	0.1	3.6	4	0	0	4	4	4	0	Clr5	domain
DUF4096	PF13340.1	gi|55376131|ref|YP_133988.1|	-	0.35	10.7	3.7	40	4.1	0.0	3.7	4	0	0	4	4	4	0	Putative	transposase	of	IS4/5	family	(DUF4096)
DUF4404	PF14357.1	gi|55376131|ref|YP_133988.1|	-	5.6	7.4	6.4	97	3.4	0.0	3.8	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4404)
Arch_flagellin	PF01917.11	gi|55376132|ref|YP_133989.1|	-	1.5e-26	93.1	38.1	1.8e-20	73.3	26.4	4.0	1	1	0	1	1	1	1	Archaebacterial	flagellin
Antitoxin-MazE	PF04014.13	gi|55376132|ref|YP_133989.1|	-	0.029	14.0	2.0	0.97	9.2	0.0	3.9	5	0	0	5	5	5	0	Antidote-toxin	recognition	MazE
RL11D	PF11088.3	gi|55376132|ref|YP_133989.1|	-	0.044	13.5	4.9	0.058	13.2	0.1	3.5	3	2	2	5	5	5	0	Glycoprotein	encoding	membrane	proteins	RL5A	and	RL6
Motile_Sperm	PF00635.21	gi|55376132|ref|YP_133989.1|	-	0.091	12.4	0.0	10	5.8	0.0	2.8	2	0	0	2	2	2	0	MSP	(Major	sperm	protein)	domain
GalKase_gal_bdg	PF10509.4	gi|55376133|ref|YP_133990.1|	-	0.014	14.6	0.1	0.033	13.4	0.1	1.5	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
Coleoptericin	PF06286.6	gi|55376133|ref|YP_133990.1|	-	0.049	13.5	0.0	0.095	12.6	0.0	1.4	1	0	0	1	1	1	0	Coleoptericin
DUF4404	PF14357.1	gi|55376133|ref|YP_133990.1|	-	0.86	10.0	5.9	0.89	10.0	0.3	3.3	3	2	1	4	4	4	0	Domain	of	unknown	function	(DUF4404)
IBR	PF01485.16	gi|55376138|ref|YP_133995.1|	-	6.9	6.6	11.9	2.2e+03	-1.4	8.3	3.0	1	1	0	1	1	1	0	IBR	domain
ResIII	PF04851.10	gi|55376142|ref|YP_133999.1|	-	4.6e-05	23.3	0.2	0.00024	20.9	0.1	2.2	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.1	gi|55376142|ref|YP_133999.1|	-	0.0062	16.1	0.1	0.0062	16.1	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|55376142|ref|YP_133999.1|	-	0.0077	15.7	0.1	0.027	13.9	0.1	1.8	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_19	PF13245.1	gi|55376142|ref|YP_133999.1|	-	0.012	15.3	0.2	0.053	13.2	0.0	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
Helicase_C_2	PF13307.1	gi|55376142|ref|YP_133999.1|	-	0.12	12.3	0.0	0.32	10.9	0.0	1.7	1	0	0	1	1	1	0	Helicase	C-terminal	domain
PhoH	PF02562.11	gi|55376142|ref|YP_133999.1|	-	0.14	11.3	0.0	0.29	10.3	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
Xpo1	PF08389.7	gi|55376143|ref|YP_134000.1|	-	0.035	14.0	0.0	0.04	13.8	0.0	1.0	1	0	0	1	1	1	0	Exportin	1-like	protein