# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPF0051 PF01458.17 gi|300709371|ref|YP_003735185.1| - 1e-72 244.4 0.5 1.4e-72 244.0 0.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) PALP PF00291.25 gi|300709372|ref|YP_003735186.1| - 2.2e-44 152.0 3.6 2.6e-44 151.8 3.6 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme adh_short_C2 PF13561.6 gi|300709374|ref|YP_003735188.1| - 7.3e-48 163.2 0.0 1.1e-47 162.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300709374|ref|YP_003735188.1| - 1.9e-38 131.9 0.0 2.2e-38 131.7 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300709374|ref|YP_003735188.1| - 1.1e-08 35.3 0.0 3.1e-08 33.7 0.0 1.7 1 1 1 2 2 2 1 KR domain 3HCDH_N PF02737.18 gi|300709374|ref|YP_003735188.1| - 0.004 17.1 0.0 0.0072 16.2 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 gi|300709374|ref|YP_003735188.1| - 0.0063 16.4 0.3 0.01 15.7 0.3 1.4 1 1 0 1 1 1 1 NAD(P)H-binding PALP PF00291.25 gi|300709374|ref|YP_003735188.1| - 0.039 13.4 2.2 0.65 9.3 1.2 2.6 2 2 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme F420_oxidored PF03807.17 gi|300709374|ref|YP_003735188.1| - 0.044 14.4 0.2 0.15 12.6 0.1 1.8 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|300709374|ref|YP_003735188.1| - 0.063 13.3 0.1 4.3 7.4 0.0 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Cupin_2 PF07883.11 gi|300709375|ref|YP_003735189.1| - 1e-15 57.2 0.7 1.4e-15 56.8 0.7 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|300709375|ref|YP_003735189.1| - 1.9e-06 27.8 0.0 2.6e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain CDO_I PF05995.12 gi|300709375|ref|YP_003735189.1| - 9.3e-06 25.1 0.0 0.0013 18.0 0.0 2.0 1 1 0 1 1 1 1 Cysteine dioxygenase type I Cupin_3 PF05899.12 gi|300709375|ref|YP_003735189.1| - 0.00052 19.6 0.1 0.0007 19.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|300709375|ref|YP_003735189.1| - 0.0011 18.8 0.0 0.0013 18.7 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase HutD PF05962.11 gi|300709375|ref|YP_003735189.1| - 0.0028 17.6 0.0 0.0034 17.4 0.0 1.1 1 0 0 1 1 1 1 HutD PCO_ADO PF07847.12 gi|300709375|ref|YP_003735189.1| - 0.0059 16.1 0.0 0.012 15.1 0.0 1.6 1 1 0 1 1 1 1 PCO_ADO Cupin_6 PF12852.7 gi|300709375|ref|YP_003735189.1| - 0.074 12.8 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Cupin FAA_hydrolase PF01557.18 gi|300709376|ref|YP_003735190.1| - 1.1e-48 165.8 0.0 1.3e-48 165.6 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF502 PF04367.13 gi|300709377|ref|YP_003735191.1| - 5e-18 64.9 0.6 7.3e-17 61.2 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF502) DUF2766 PF10964.8 gi|300709378|ref|YP_003735192.1| - 0.1 12.6 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2766) NIR_SIR PF01077.22 gi|300709379|ref|YP_003735193.1| - 1.1e-44 151.7 0.1 1.7e-35 121.8 0.0 2.5 3 0 0 3 3 3 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|300709379|ref|YP_003735193.1| - 2.5e-41 139.4 0.2 1.4e-19 69.7 0.0 3.5 2 1 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain Peptidase_M20 PF01546.28 gi|300709383|ref|YP_003735197.1| - 3.2e-32 111.9 0.9 4.2e-32 111.5 0.9 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|300709383|ref|YP_003735197.1| - 1e-09 38.3 0.0 4.3e-09 36.2 0.0 1.9 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|300709383|ref|YP_003735197.1| - 3e-06 27.1 0.1 0.0001 22.0 0.1 2.2 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M42 PF05343.14 gi|300709383|ref|YP_003735197.1| - 0.00089 18.4 0.0 0.14 11.2 0.0 2.2 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase MC1 PF05854.11 gi|300709385|ref|YP_003735199.1| - 1.6e-46 156.5 0.2 1.9e-46 156.3 0.2 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 SymE_toxin PF08845.10 gi|300709386|ref|YP_003735200.1| - 0.0031 17.5 0.0 0.0033 17.5 0.0 1.2 1 0 0 1 1 1 1 Toxin SymE, type I toxin-antitoxin system MazE_antitoxin PF04014.18 gi|300709386|ref|YP_003735200.1| - 0.0096 15.8 0.3 0.015 15.2 0.3 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin DHO_dh PF01180.21 gi|300709387|ref|YP_003735201.1| - 6.5e-88 294.8 0.0 7.5e-88 294.6 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 gi|300709387|ref|YP_003735201.1| - 0.00099 18.6 0.1 0.0038 16.7 0.0 1.9 3 0 0 3 3 3 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|300709387|ref|YP_003735201.1| - 0.052 12.6 0.0 2.1 7.3 0.0 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase tRNA-synt_1b PF00579.25 gi|300709388|ref|YP_003735202.1| - 3.6e-42 144.7 0.0 8.8e-25 87.6 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) tRNA_int_endo PF01974.17 gi|300709389|ref|YP_003735203.1| - 1.2e-30 105.4 0.6 5.7e-25 87.2 0.0 3.3 2 1 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|300709389|ref|YP_003735203.1| - 1.1e-23 82.7 0.0 3.6e-11 42.6 0.0 2.5 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|300709389|ref|YP_003735203.1| - 0.00065 19.8 0.0 0.23 11.7 0.0 2.6 2 0 0 2 2 2 2 tRNA-splicing endonuclease subunit sen54 N-term zf-C4_Topoisom PF01396.19 gi|300709390|ref|YP_003735204.1| - 5.6e-07 29.2 6.7 2.3e-06 27.3 0.4 2.7 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger NucS PF01939.16 gi|300709390|ref|YP_003735204.1| - 0.00029 20.3 0.0 0.0004 19.8 0.0 1.2 1 0 0 1 1 1 1 Endonuclease NucS zinc-ribbons_6 PF07191.12 gi|300709390|ref|YP_003735204.1| - 0.00084 19.3 3.6 0.53 10.3 0.2 2.4 2 0 0 2 2 2 2 zinc-ribbons Auto_anti-p27 PF06677.12 gi|300709390|ref|YP_003735204.1| - 0.074 13.2 17.9 4.2 7.6 1.6 4.4 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TRAF6_Z2 PF18048.1 gi|300709390|ref|YP_003735204.1| - 0.19 11.8 2.0 2.2 8.5 0.2 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 Zn-ribbon_8 PF09723.10 gi|300709390|ref|YP_003735204.1| - 3.1 8.0 7.9 3.7 7.8 0.3 3.0 3 0 0 3 3 3 0 Zinc ribbon domain zf-IS66 PF13005.7 gi|300709390|ref|YP_003735204.1| - 6.9 7.2 12.0 7.7 7.0 0.2 3.0 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 HAD_2 PF13419.6 gi|300709391|ref|YP_003735205.1| - 1.2e-27 97.2 0.0 1.4e-27 96.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300709391|ref|YP_003735205.1| - 4.3e-19 69.6 0.1 2.4e-18 67.2 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300709391|ref|YP_003735205.1| - 1.3e-13 51.7 0.1 1.7e-13 51.4 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300709391|ref|YP_003735205.1| - 1.4e-09 37.8 0.1 3.2e-09 36.7 0.1 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like NT5C PF06941.12 gi|300709391|ref|YP_003735205.1| - 0.0036 17.2 0.3 0.032 14.1 0.2 2.3 2 1 0 2 2 2 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.6 gi|300709391|ref|YP_003735205.1| - 0.02 15.0 0.0 0.25 11.5 0.0 2.3 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|300709391|ref|YP_003735205.1| - 0.16 11.7 0.0 4.8 6.8 0.0 2.2 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase TrkA_N PF02254.18 gi|300709391|ref|YP_003735205.1| - 0.64 10.3 2.3 2.9 8.2 0.1 2.7 3 0 0 3 3 3 0 TrkA-N domain DEAD PF00270.29 gi|300709392|ref|YP_003735206.1| - 6.8e-24 84.6 0.0 3.1e-23 82.5 0.0 2.1 3 0 0 3 3 3 1 DEAD/DEAH box helicase Sec63 PF02889.16 gi|300709392|ref|YP_003735206.1| - 1.1e-16 60.8 0.0 1.5e-16 60.3 0.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain ResIII PF04851.15 gi|300709392|ref|YP_003735206.1| - 9e-11 42.1 0.0 1.5e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|300709392|ref|YP_003735206.1| - 2.6e-08 34.2 0.0 1.7e-07 31.6 0.0 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|300709392|ref|YP_003735206.1| - 2.3e-06 28.1 0.1 6.1e-06 26.7 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|300709392|ref|YP_003735206.1| - 0.0044 16.8 0.0 0.013 15.4 0.0 1.8 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Radical_SAM PF04055.21 gi|300709393|ref|YP_003735207.1| - 2.7e-13 50.6 0.1 5.2e-13 49.7 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 gi|300709393|ref|YP_003735207.1| - 3e-11 43.7 0.1 6.2e-11 42.7 0.1 1.5 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family SH3BP5 PF05276.14 gi|300709393|ref|YP_003735207.1| - 0.037 13.8 0.1 0.058 13.2 0.1 1.2 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) DUF839 PF05787.13 gi|300709394|ref|YP_003735208.1| - 4.3e-31 108.7 15.9 2.6e-25 89.6 7.7 3.4 3 1 1 4 4 4 3 Bacterial protein of unknown function (DUF839) E1_dh PF00676.20 gi|300709395|ref|YP_003735209.1| - 2.1e-87 292.9 0.0 2.4e-87 292.7 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|300709395|ref|YP_003735209.1| - 1.6e-06 27.5 0.0 2.4e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_N PF00456.21 gi|300709395|ref|YP_003735209.1| - 0.00053 19.0 0.0 0.001 18.1 0.0 1.3 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain HTH_41 PF14502.6 gi|300709395|ref|YP_003735209.1| - 0.023 14.4 0.1 0.045 13.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain TPP_enzyme_C PF02775.21 gi|300709395|ref|YP_003735209.1| - 0.038 13.8 1.3 0.16 11.7 0.1 2.4 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transket_pyr PF02779.24 gi|300709396|ref|YP_003735210.1| - 3.1e-49 167.1 0.0 4.5e-49 166.5 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|300709396|ref|YP_003735210.1| - 8.6e-35 119.3 0.0 1.5e-34 118.5 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain 2-oxoacid_dh PF00198.23 gi|300709397|ref|YP_003735211.1| - 1.3e-90 303.0 0.0 1.7e-90 302.6 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|300709397|ref|YP_003735211.1| - 1.4e-24 85.7 4.1 2.5e-24 84.9 4.1 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 gi|300709397|ref|YP_003735211.1| - 3.7e-21 75.2 0.5 2.5e-14 53.3 0.2 2.7 2 0 0 2 2 2 2 e3 binding domain Biotin_lipoyl_2 PF13533.6 gi|300709397|ref|YP_003735211.1| - 7.7e-06 25.6 8.8 0.0029 17.4 0.4 3.0 2 1 1 3 3 3 2 Biotin-lipoyl like GCV_H PF01597.19 gi|300709397|ref|YP_003735211.1| - 3e-05 23.9 1.2 9.3e-05 22.3 1.2 1.9 1 0 0 1 1 1 1 Glycine cleavage H-protein HlyD_3 PF13437.6 gi|300709397|ref|YP_003735211.1| - 0.0011 19.6 4.1 0.073 13.8 0.3 2.5 1 1 1 2 2 2 2 HlyD family secretion protein RnfC_N PF13375.6 gi|300709397|ref|YP_003735211.1| - 0.0029 17.5 0.7 0.0064 16.4 0.7 1.5 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Pyr_redox_2 PF07992.14 gi|300709398|ref|YP_003735212.1| - 3.1e-66 223.6 6.9 3.1e-66 223.6 6.9 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|300709398|ref|YP_003735212.1| - 1.5e-38 131.4 1.7 3.3e-38 130.3 1.1 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|300709398|ref|YP_003735212.1| - 7.8e-20 71.2 8.4 1.5e-18 67.1 0.8 3.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300709398|ref|YP_003735212.1| - 1.2e-09 37.9 0.6 1.4e-08 34.3 0.6 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300709398|ref|YP_003735212.1| - 2.4e-08 33.1 5.9 0.00026 19.8 0.1 3.4 2 1 1 3 3 3 2 HI0933-like protein FAD_binding_3 PF01494.19 gi|300709398|ref|YP_003735212.1| - 2.6e-07 30.2 4.1 0.00043 19.6 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 gi|300709398|ref|YP_003735212.1| - 3.1e-07 29.8 11.1 2.4e-05 23.6 1.7 3.4 3 0 0 3 3 3 2 FAD binding domain GIDA PF01134.22 gi|300709398|ref|YP_003735212.1| - 4e-07 29.4 7.5 6.7e-06 25.4 2.6 2.6 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|300709398|ref|YP_003735212.1| - 1.8e-05 24.3 1.9 1.8e-05 24.3 1.9 2.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|300709398|ref|YP_003735212.1| - 1.8e-05 24.9 5.7 0.004 17.3 0.8 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300709398|ref|YP_003735212.1| - 0.00012 21.8 18.3 0.57 9.7 1.7 4.2 3 1 1 4 4 4 3 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|300709398|ref|YP_003735212.1| - 0.0004 20.0 3.7 0.00081 19.0 0.4 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|300709398|ref|YP_003735212.1| - 0.001 19.0 3.2 0.0012 18.7 0.2 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|300709398|ref|YP_003735212.1| - 0.0094 16.4 0.4 1.7 9.2 0.0 2.6 2 0 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|300709398|ref|YP_003735212.1| - 0.012 14.9 12.5 0.55 9.5 0.2 3.8 3 2 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|300709398|ref|YP_003735212.1| - 0.013 14.8 6.6 0.041 13.1 1.0 2.6 3 0 0 3 3 3 0 Thi4 family XdhC_C PF13478.6 gi|300709398|ref|YP_003735212.1| - 0.014 15.8 4.9 0.083 13.4 0.4 3.3 3 1 0 3 3 2 0 XdhC Rossmann domain K_oxygenase PF13434.6 gi|300709398|ref|YP_003735212.1| - 0.033 13.3 0.1 6.8 5.7 0.0 2.3 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|300709398|ref|YP_003735212.1| - 0.052 12.6 4.6 0.56 9.2 0.4 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein TrkA_N PF02254.18 gi|300709398|ref|YP_003735212.1| - 0.058 13.7 1.2 0.36 11.1 0.1 2.4 2 0 0 2 2 2 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|300709398|ref|YP_003735212.1| - 0.087 12.2 0.9 0.36 10.2 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|300709398|ref|YP_003735212.1| - 0.099 11.5 3.6 0.1 11.4 0.3 2.2 2 0 0 2 2 2 0 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|300709398|ref|YP_003735212.1| - 0.23 11.5 4.5 5.6 6.9 0.1 3.4 3 1 1 4 4 4 0 FAD-NAD(P)-binding SBP_bac_5 PF00496.22 gi|300709399|ref|YP_003735213.1| - 8.2e-33 113.9 0.0 5.6e-31 107.8 0.0 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PDT PF00800.18 gi|300709400|ref|YP_003735214.1| - 1.9e-47 161.4 0.0 2.3e-47 161.2 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|300709400|ref|YP_003735214.1| - 6.5e-06 25.8 0.0 2e-05 24.3 0.0 1.8 1 0 0 1 1 1 1 ACT domain 5_nucleotid_C PF02872.18 gi|300709401|ref|YP_003735215.1| - 2.2e-26 92.9 0.0 3.8e-26 92.2 0.0 1.4 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 gi|300709401|ref|YP_003735215.1| - 0.00013 22.6 0.3 0.0002 21.9 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Asp_Glu_race PF01177.22 gi|300709401|ref|YP_003735215.1| - 0.16 11.8 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase Trehalase PF01204.18 gi|300709402|ref|YP_003735216.1| - 6.6e-129 431.0 0.0 1.7e-128 429.7 0.0 1.6 1 1 0 1 1 1 1 Trehalase Glyco_hydro_63 PF03200.16 gi|300709402|ref|YP_003735216.1| - 0.044 12.5 0.1 2.5 6.8 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 63 C-terminal domain BPD_transp_1 PF00528.22 gi|300709404|ref|YP_003735218.1| - 2.2e-22 79.7 18.6 2.2e-22 79.7 18.6 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF5353 PF17304.2 gi|300709404|ref|YP_003735218.1| - 0.46 10.3 3.3 0.98 9.2 2.3 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5353) ABC_tran PF00005.27 gi|300709405|ref|YP_003735219.1| - 2.4e-31 109.1 0.0 3.7e-31 108.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709405|ref|YP_003735219.1| - 9e-07 29.0 0.0 0.0077 16.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300709405|ref|YP_003735219.1| - 0.00011 22.7 0.2 0.00031 21.2 0.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|300709405|ref|YP_003735219.1| - 0.00072 19.5 0.0 0.0018 18.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 gi|300709405|ref|YP_003735219.1| - 0.0025 17.3 0.0 0.23 10.9 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300709405|ref|YP_003735219.1| - 0.0031 17.2 0.0 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|300709405|ref|YP_003735219.1| - 0.008 16.6 0.6 0.074 13.5 0.6 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|300709405|ref|YP_003735219.1| - 0.01 15.5 0.0 0.081 12.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|300709405|ref|YP_003735219.1| - 0.013 16.0 0.1 0.018 15.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|300709405|ref|YP_003735219.1| - 0.017 15.0 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain RNA_helicase PF00910.22 gi|300709405|ref|YP_003735219.1| - 0.037 14.4 0.1 0.11 12.9 0.0 1.8 2 0 0 2 2 2 0 RNA helicase APS_kinase PF01583.20 gi|300709405|ref|YP_003735219.1| - 0.046 13.6 0.0 6.8 6.6 0.0 2.4 2 1 0 2 2 2 0 Adenylylsulphate kinase AAA_25 PF13481.6 gi|300709405|ref|YP_003735219.1| - 0.048 13.2 0.2 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|300709405|ref|YP_003735219.1| - 0.057 13.7 0.1 0.6 10.3 0.0 2.4 3 0 0 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 gi|300709405|ref|YP_003735219.1| - 0.057 13.5 0.0 0.15 12.2 0.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|300709405|ref|YP_003735219.1| - 0.061 13.6 0.0 0.18 12.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|300709405|ref|YP_003735219.1| - 0.21 11.1 0.0 0.36 10.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region BPD_transp_1 PF00528.22 gi|300709406|ref|YP_003735220.1| - 2.9e-22 79.3 13.0 2.9e-22 79.3 13.0 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component T4bSS_IcmS PF12608.8 gi|300709406|ref|YP_003735220.1| - 0.12 12.7 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 Type IVb secretion, IcmS, effector-recruitment Caveolin PF01146.17 gi|300709406|ref|YP_003735220.1| - 4.3 7.3 7.4 0.81 9.7 2.9 2.1 2 1 0 2 2 2 0 Caveolin NMT1 PF09084.11 gi|300709407|ref|YP_003735221.1| - 1.2e-08 35.2 0.0 1.7e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 gi|300709407|ref|YP_003735221.1| - 0.0018 18.0 0.0 0.0027 17.5 0.0 1.3 1 1 0 1 1 1 1 NMT1-like family SBP_bac_3 PF00497.20 gi|300709407|ref|YP_003735221.1| - 0.0039 16.6 0.0 0.0095 15.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 TAT_signal PF10518.9 gi|300709407|ref|YP_003735221.1| - 0.0052 16.6 2.4 0.0052 16.6 2.4 2.1 1 1 1 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence tRNA-synt_1 PF00133.22 gi|300709408|ref|YP_003735222.1| - 4.9e-72 243.0 3.1 1.1e-26 93.2 0.8 4.9 1 1 3 4 4 4 4 tRNA synthetases class I (I, L, M and V) tRNA-synt_1_2 PF13603.6 gi|300709408|ref|YP_003735222.1| - 2e-56 190.5 0.0 3.1e-56 189.8 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 gi|300709408|ref|YP_003735222.1| - 2.7e-40 138.3 0.0 4.3e-24 85.0 0.0 4.3 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|300709408|ref|YP_003735222.1| - 3.6e-15 56.2 0.0 6.8e-15 55.3 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|300709408|ref|YP_003735222.1| - 2.1e-09 37.2 0.1 2.6e-06 27.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|300709408|ref|YP_003735222.1| - 2e-05 23.7 0.0 0.004 16.1 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) DZR PF12773.7 gi|300709408|ref|YP_003735222.1| - 0.00047 20.1 2.8 0.28 11.2 0.2 2.6 2 1 0 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|300709408|ref|YP_003735222.1| - 0.0027 17.1 7.8 7.7 6.1 0.2 4.3 4 0 0 4 4 4 1 zinc-ribbon domain DUF2717 PF10911.8 gi|300709408|ref|YP_003735222.1| - 0.036 13.8 0.0 0.081 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) Unstab_antitox PF09720.10 gi|300709408|ref|YP_003735222.1| - 0.037 14.1 3.3 0.13 12.4 3.3 2.0 1 0 0 1 1 1 0 Putative addiction module component DNA_ligase_ZBD PF03119.16 gi|300709408|ref|YP_003735222.1| - 0.04 13.9 14.8 0.063 13.3 0.0 4.7 4 1 1 5 5 5 0 NAD-dependent DNA ligase C4 zinc finger domain Zn-ribbon_8 PF09723.10 gi|300709408|ref|YP_003735222.1| - 0.2 11.8 11.4 0.28 11.3 0.2 3.8 3 1 1 4 4 4 0 Zinc ribbon domain tRNA-synt_1b PF00579.25 gi|300709408|ref|YP_003735222.1| - 0.27 10.5 0.1 0.87 8.8 0.0 1.7 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Auto_anti-p27 PF06677.12 gi|300709408|ref|YP_003735222.1| - 0.3 11.3 9.1 0.89 9.8 0.3 3.3 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.12 gi|300709408|ref|YP_003735222.1| - 0.42 10.2 11.6 12 5.5 0.3 3.7 3 0 0 3 3 3 0 TFIIB zinc-binding PknG_rubred PF16919.5 gi|300709408|ref|YP_003735222.1| - 1 9.5 2.9 1 9.5 0.4 2.3 2 0 0 2 2 2 0 Protein kinase G rubredoxin domain zf-HYPF PF07503.12 gi|300709408|ref|YP_003735222.1| - 4.2 7.2 5.7 18 5.2 0.6 3.4 3 0 0 3 3 3 0 HypF finger PV-1 PF06637.11 gi|300709409|ref|YP_003735223.1| - 0.16 10.8 0.2 0.15 10.8 0.2 1.1 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF4834 PF16118.5 gi|300709409|ref|YP_003735223.1| - 3.8 8.5 5.6 0.77 10.8 2.5 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) OCD_Mu_crystall PF02423.15 gi|300709410|ref|YP_003735224.1| - 1.6e-96 323.0 0.3 1.8e-96 322.9 0.3 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family 2TM PF13239.6 gi|300709411|ref|YP_003735225.1| - 0.048 14.0 2.9 0.051 13.9 2.9 1.1 1 0 0 1 1 1 0 2TM domain SdpI PF13630.6 gi|300709411|ref|YP_003735225.1| - 0.075 13.2 2.2 0.093 12.9 2.2 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family Cpta_toxin PF07254.12 gi|300709411|ref|YP_003735225.1| - 0.19 11.7 1.0 0.21 11.6 1.0 1.0 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system DUF2892 PF11127.8 gi|300709411|ref|YP_003735225.1| - 0.53 10.3 4.5 0.66 10.0 4.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) DUF3188 PF11384.8 gi|300709411|ref|YP_003735225.1| - 0.67 9.7 5.0 0.62 9.8 1.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3188) Cpn60_TCP1 PF00118.24 gi|300709412|ref|YP_003735226.1| - 2e-168 561.0 17.6 2.3e-168 560.9 17.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3450 PF11932.8 gi|300709412|ref|YP_003735226.1| - 0.0021 17.4 1.3 0.0021 17.4 1.3 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) Gram_pos_anchor PF00746.21 gi|300709413|ref|YP_003735227.1| - 1.7 8.6 3.6 23 5.0 0.0 2.5 2 0 0 2 2 2 0 LPXTG cell wall anchor motif MCM PF00493.23 gi|300709414|ref|YP_003735228.1| - 1.3e-92 309.0 0.0 1.8e-92 308.5 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|300709414|ref|YP_003735228.1| - 3e-37 127.3 0.4 5e-37 126.6 0.4 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|300709414|ref|YP_003735228.1| - 8.5e-29 99.8 0.7 2.2e-28 98.5 0.7 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 gi|300709414|ref|YP_003735228.1| - 1.1e-10 41.2 0.0 8e-06 25.4 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM_N PF14551.6 gi|300709414|ref|YP_003735228.1| - 2e-08 34.8 0.7 9.1e-08 32.6 0.1 2.4 3 0 0 3 3 2 1 MCM N-terminal domain AAA_5 PF07728.14 gi|300709414|ref|YP_003735228.1| - 4.1e-06 26.8 0.0 1.3e-05 25.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|300709414|ref|YP_003735228.1| - 1.7e-05 25.3 1.2 3.8e-05 24.1 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 gi|300709414|ref|YP_003735228.1| - 0.00053 19.7 0.0 0.011 15.5 0.0 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_22 PF13401.6 gi|300709414|ref|YP_003735228.1| - 0.0026 18.1 0.1 0.018 15.3 0.1 2.4 1 1 0 1 1 1 1 AAA domain DUF3987 PF13148.6 gi|300709414|ref|YP_003735228.1| - 0.0027 16.8 0.1 0.46 9.4 0.2 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3987) AAA PF00004.29 gi|300709414|ref|YP_003735228.1| - 0.0047 17.3 0.0 0.015 15.7 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|300709414|ref|YP_003735228.1| - 0.025 14.3 1.8 0.038 13.7 0.1 2.1 3 0 0 3 3 3 0 AAA domain AAA_7 PF12775.7 gi|300709414|ref|YP_003735228.1| - 0.043 13.3 0.0 0.078 12.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_3 PF07726.11 gi|300709414|ref|YP_003735228.1| - 0.045 13.6 0.0 0.19 11.6 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|300709414|ref|YP_003735228.1| - 0.051 14.1 1.6 2 9.0 0.0 3.3 3 1 1 4 4 4 0 AAA domain DUF4072 PF13284.6 gi|300709414|ref|YP_003735228.1| - 0.059 13.8 1.0 0.19 12.2 1.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4072) AAA_29 PF13555.6 gi|300709414|ref|YP_003735228.1| - 0.11 12.2 0.1 0.31 10.8 0.0 1.7 2 0 0 2 2 1 0 P-loop containing region of AAA domain DZR PF12773.7 gi|300709414|ref|YP_003735228.1| - 0.15 12.1 0.8 0.29 11.2 0.8 1.4 1 0 0 1 1 1 0 Double zinc ribbon His_biosynth PF00977.21 gi|300709415|ref|YP_003735229.1| - 3.2e-74 249.2 4.8 3.6e-74 249.1 4.8 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|300709415|ref|YP_003735229.1| - 1.6e-11 44.0 0.8 1.6e-05 24.3 0.1 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase Dus PF01207.17 gi|300709415|ref|YP_003735229.1| - 7.1e-11 41.7 0.2 8.1e-05 21.9 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.17 gi|300709415|ref|YP_003735229.1| - 3.4e-08 33.2 5.2 0.00023 20.7 0.2 2.6 2 1 1 3 3 3 2 PcrB family NMO PF03060.15 gi|300709415|ref|YP_003735229.1| - 4.2e-07 29.7 3.9 4.2e-07 29.7 3.9 2.1 1 1 1 2 2 2 1 Nitronate monooxygenase ThiG PF05690.14 gi|300709415|ref|YP_003735229.1| - 4.7e-07 29.4 5.1 0.0045 16.3 0.5 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|300709415|ref|YP_003735229.1| - 1.1e-05 24.8 1.7 0.0034 16.6 0.0 3.4 2 2 2 4 4 4 1 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.20 gi|300709415|ref|YP_003735229.1| - 5.8e-05 22.1 2.6 0.062 12.1 0.2 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain IMPDH PF00478.25 gi|300709415|ref|YP_003735229.1| - 6.9e-05 22.0 7.2 0.00021 20.4 7.0 1.7 1 1 1 2 2 2 2 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|300709415|ref|YP_003735229.1| - 0.00015 21.0 8.8 0.016 14.3 1.0 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase NanE PF04131.14 gi|300709415|ref|YP_003735229.1| - 0.00021 20.5 1.0 0.073 12.2 0.0 2.3 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.17 gi|300709415|ref|YP_003735229.1| - 0.00023 20.5 2.0 0.00074 18.9 0.3 2.1 2 0 0 2 2 2 1 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|300709415|ref|YP_003735229.1| - 0.00027 20.4 1.0 0.012 15.1 0.1 2.4 2 1 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator DNA_pol_lambd_f PF10391.9 gi|300709415|ref|YP_003735229.1| - 0.0058 16.4 0.2 1.2 9.0 0.0 2.9 3 0 0 3 3 3 1 Fingers domain of DNA polymerase lambda Ribul_P_3_epim PF00834.19 gi|300709415|ref|YP_003735229.1| - 0.0086 15.5 2.5 0.096 12.1 0.3 2.4 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family BtpA PF03437.15 gi|300709415|ref|YP_003735229.1| - 0.0097 15.4 4.4 0.2 11.1 0.3 3.0 1 1 2 3 3 3 1 BtpA family Glu_synthase PF01645.17 gi|300709415|ref|YP_003735229.1| - 2.5 7.1 8.6 3.7 6.6 0.3 2.5 1 1 1 2 2 2 0 Conserved region in glutamate synthase Fer2 PF00111.27 gi|300709416|ref|YP_003735230.1| - 2.1e-14 53.2 0.3 3.3e-14 52.6 0.3 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|300709416|ref|YP_003735230.1| - 0.079 13.0 0.1 0.17 12.0 0.1 1.5 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Arc_PepC_II PF06847.11 gi|300709417|ref|YP_003735231.1| - 2.1e-12 47.4 0.0 4.2e-10 40.0 0.0 2.3 2 0 0 2 2 2 2 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|300709417|ref|YP_003735231.1| - 1.2e-08 35.3 8.6 1.2e-08 35.3 8.6 1.7 2 0 0 2 2 2 1 Type IV leader peptidase family MarR_2 PF12802.7 gi|300709418|ref|YP_003735232.1| - 5.4e-09 35.8 0.1 1.1e-08 34.9 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300709418|ref|YP_003735232.1| - 4.2e-07 29.7 0.1 8e-07 28.8 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|300709418|ref|YP_003735232.1| - 5.2e-06 26.2 0.0 9.2e-06 25.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300709418|ref|YP_003735232.1| - 0.00032 20.7 0.6 0.00062 19.8 0.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|300709418|ref|YP_003735232.1| - 0.00045 19.7 0.0 0.00087 18.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|300709418|ref|YP_003735232.1| - 0.0055 16.6 0.0 0.014 15.2 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300709418|ref|YP_003735232.1| - 0.026 14.4 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|300709418|ref|YP_003735232.1| - 0.068 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 HTH domain PRA-CH PF01502.18 gi|300709419|ref|YP_003735233.1| - 5.5e-35 119.0 0.4 6.8e-35 118.7 0.4 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Halo_GVPC PF05465.13 gi|300709420|ref|YP_003735234.1| - 0.032 14.5 11.0 0.12 12.7 0.2 4.1 3 0 0 3 3 3 0 Halobacterial gas vesicle protein C (GVPC) repeat RD3 PF14473.6 gi|300709420|ref|YP_003735234.1| - 0.058 13.2 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 RD3 protein ABC_tran_CTD PF16326.5 gi|300709420|ref|YP_003735234.1| - 2.6 8.4 7.1 4.4 7.6 0.0 3.6 3 1 0 3 3 3 0 ABC transporter C-terminal domain Bac_globin PF01152.21 gi|300709421|ref|YP_003735235.1| - 8.4e-25 87.3 0.1 9.6e-25 87.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial-like globin DUF1539 PF07560.11 gi|300709421|ref|YP_003735235.1| - 0.0097 16.0 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1539) Protoglobin PF11563.8 gi|300709421|ref|YP_003735235.1| - 0.023 14.6 0.1 0.089 12.7 0.1 1.7 1 1 1 2 2 2 0 Protoglobin PGM_PMM_I PF02878.16 gi|300709422|ref|YP_003735236.1| - 1.3e-33 115.6 0.0 2.4e-33 114.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|300709422|ref|YP_003735236.1| - 8.8e-29 100.2 0.1 2.1e-28 99.0 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|300709422|ref|YP_003735236.1| - 6.1e-15 55.1 1.2 6.1e-15 55.1 1.2 2.3 3 0 0 3 3 3 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 gi|300709422|ref|YP_003735236.1| - 3e-14 53.2 0.0 6.4e-14 52.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pribosyltran_N PF13793.6 gi|300709424|ref|YP_003735238.1| - 5.1e-21 74.8 0.0 6e-20 71.3 0.0 2.3 2 1 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|300709424|ref|YP_003735238.1| - 4e-11 42.7 0.3 9.8e-10 38.2 0.4 2.5 3 0 0 3 3 3 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300709424|ref|YP_003735238.1| - 0.027 13.9 0.0 0.05 13.0 0.0 1.4 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Pribosyl_synth PF14572.6 gi|300709424|ref|YP_003735238.1| - 0.053 13.5 0.2 0.098 12.7 0.2 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain Glyco_transf_4 PF13439.6 gi|300709424|ref|YP_003735238.1| - 0.057 13.4 0.1 3.4 7.6 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300709424|ref|YP_003735238.1| - 0.11 13.0 4.8 0.1 13.0 0.4 2.3 2 1 0 2 2 2 0 Glycosyl transferase 4-like domain tRNA-synt_1 PF00133.22 gi|300709425|ref|YP_003735239.1| - 1.3e-178 595.0 0.3 1.7e-178 594.7 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|300709425|ref|YP_003735239.1| - 1e-32 113.2 0.3 2.5e-32 111.9 0.2 1.7 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|300709425|ref|YP_003735239.1| - 5.7e-27 94.5 1.2 1.1e-11 44.2 0.0 4.1 4 1 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|300709425|ref|YP_003735239.1| - 8.9e-05 22.1 0.0 0.0002 21.0 0.0 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|300709425|ref|YP_003735239.1| - 0.00012 21.6 0.0 0.00034 20.1 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|300709425|ref|YP_003735239.1| - 0.0023 16.9 0.0 0.013 14.4 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (K) UDG PF03167.19 gi|300709426|ref|YP_003735240.1| - 3.6e-24 85.5 0.0 4.9e-24 85.1 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HIT PF01230.23 gi|300709427|ref|YP_003735241.1| - 1.5e-25 89.8 0.0 1.9e-25 89.5 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|300709427|ref|YP_003735241.1| - 9.8e-14 51.8 0.0 1.1e-13 51.6 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding TFIIB PF00382.19 gi|300709428|ref|YP_003735242.1| - 5.8e-28 96.8 0.9 4.1e-13 49.2 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|300709428|ref|YP_003735242.1| - 3.6e-12 45.6 4.0 6.3e-12 44.8 4.0 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding zinc-ribbons_6 PF07191.12 gi|300709428|ref|YP_003735242.1| - 0.052 13.5 0.3 0.11 12.5 0.3 1.5 1 0 0 1 1 1 0 zinc-ribbons Rrf2 PF02082.20 gi|300709428|ref|YP_003735242.1| - 0.084 13.2 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator RB_B PF01857.20 gi|300709428|ref|YP_003735242.1| - 0.089 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain zf-ribbon_3 PF13248.6 gi|300709428|ref|YP_003735242.1| - 0.093 12.2 2.1 0.2 11.1 2.1 1.6 1 0 0 1 1 1 0 zinc-ribbon domain IGPD PF00475.18 gi|300709429|ref|YP_003735243.1| - 3.9e-59 199.1 3.1 5.9e-59 198.5 3.1 1.3 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase ACT PF01842.25 gi|300709430|ref|YP_003735244.1| - 1.4e-06 27.9 0.2 7.1e-06 25.7 0.1 2.2 2 1 0 2 2 2 1 ACT domain ACT_7 PF13840.6 gi|300709430|ref|YP_003735244.1| - 0.0018 18.0 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 ACT domain ELFV_dehydrog PF00208.21 gi|300709431|ref|YP_003735245.1| - 2.2e-70 237.2 0.1 3.3e-70 236.6 0.1 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|300709431|ref|YP_003735245.1| - 1.7e-53 180.0 0.0 3e-53 179.1 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|300709431|ref|YP_003735245.1| - 0.00048 19.5 0.0 0.00079 18.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|300709431|ref|YP_003735245.1| - 0.034 14.2 0.0 0.055 13.5 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|300709431|ref|YP_003735245.1| - 1.3 8.3 5.4 4.5 6.5 5.4 1.9 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DZR PF12773.7 gi|300709432|ref|YP_003735246.1| - 0.00031 20.7 3.3 0.00039 20.4 3.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|300709432|ref|YP_003735246.1| - 0.0045 16.9 0.6 0.0051 16.8 0.6 1.1 1 0 0 1 1 1 1 zinc-ribbons zf-ANAPC11 PF12861.7 gi|300709432|ref|YP_003735246.1| - 0.0058 16.7 0.5 0.007 16.4 0.5 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rubredoxin_2 PF18073.1 gi|300709432|ref|YP_003735246.1| - 0.0082 15.8 2.2 0.025 14.3 2.2 1.8 1 1 0 1 1 1 1 Rubredoxin metal binding domain Zn-ribbon_8 PF09723.10 gi|300709432|ref|YP_003735246.1| - 0.014 15.5 3.9 0.024 14.7 3.9 1.5 1 1 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 gi|300709432|ref|YP_003735246.1| - 0.025 14.6 1.1 0.025 14.6 1.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-HIT PF04438.16 gi|300709432|ref|YP_003735246.1| - 0.11 12.3 3.4 1.7 8.6 0.0 2.3 2 1 0 2 2 2 0 HIT zinc finger DUF4796 PF16044.5 gi|300709432|ref|YP_003735246.1| - 0.19 11.3 1.0 0.2 11.3 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) BAT PF15915.5 gi|300709433|ref|YP_003735247.1| - 4.8e-36 124.0 14.1 4.8e-36 124.0 14.1 3.9 4 1 1 5 5 5 1 GAF and HTH_10 associated domain GAF_2 PF13185.6 gi|300709433|ref|YP_003735247.1| - 4.3e-21 75.7 16.5 1.6e-17 64.1 1.7 4.1 3 1 0 3 3 3 2 GAF domain HTH_10 PF04967.12 gi|300709433|ref|YP_003735247.1| - 3.8e-17 61.8 0.1 1.6e-16 59.8 0.0 2.2 2 0 0 2 2 2 1 HTH DNA binding domain PAS_4 PF08448.10 gi|300709433|ref|YP_003735247.1| - 8.6e-08 32.4 11.9 2.8e-06 27.5 0.2 4.6 5 1 0 5 5 5 2 PAS fold GAF PF01590.26 gi|300709433|ref|YP_003735247.1| - 1.3e-07 32.3 0.1 3.9e-07 30.7 0.0 1.9 2 0 0 2 2 2 1 GAF domain Response_reg PF00072.24 gi|300709433|ref|YP_003735247.1| - 1.9e-07 31.2 0.0 4.6e-07 30.0 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain PAS_8 PF13188.7 gi|300709433|ref|YP_003735247.1| - 7.5e-05 22.7 0.1 0.04 13.9 0.0 2.9 2 0 0 2 2 2 1 PAS domain GAF_3 PF13492.6 gi|300709433|ref|YP_003735247.1| - 0.00068 20.0 0.5 0.028 14.8 0.0 2.6 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|300709433|ref|YP_003735247.1| - 0.0011 18.9 0.0 0.57 10.2 0.0 3.3 3 0 0 3 3 3 1 PAS fold HTH_22 PF13309.6 gi|300709433|ref|YP_003735247.1| - 0.057 13.5 0.0 0.83 9.8 0.0 2.6 2 0 0 2 2 2 0 HTH domain UPF0029 PF01205.19 gi|300709434|ref|YP_003735248.1| - 3.1e-30 104.6 0.0 4e-30 104.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF1949 PF09186.11 gi|300709434|ref|YP_003735248.1| - 1.8e-10 40.5 0.2 5.1e-10 39.1 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1949) Takusan PF04822.13 gi|300709434|ref|YP_003735248.1| - 0.015 15.2 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 Takusan EFG_C PF00679.24 gi|300709434|ref|YP_003735248.1| - 0.065 13.3 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus Peptidase_S9 PF00326.21 gi|300709435|ref|YP_003735249.1| - 2.5e-55 187.3 0.1 4.8e-55 186.3 0.1 1.5 1 0 0 1 1 1 1 Prolyl oligopeptidase family PD40 PF07676.12 gi|300709435|ref|YP_003735249.1| - 2.7e-11 43.1 2.8 5.8e-05 22.9 0.5 5.2 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat Abhydrolase_1 PF00561.20 gi|300709435|ref|YP_003735249.1| - 4.7e-07 29.7 0.3 6.4e-05 22.7 0.6 2.2 1 1 1 2 2 2 1 alpha/beta hydrolase fold DPPIV_N PF00930.21 gi|300709435|ref|YP_003735249.1| - 1.6e-05 23.9 0.0 0.83 8.3 0.1 4.3 4 1 0 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Hydrolase_4 PF12146.8 gi|300709435|ref|YP_003735249.1| - 2.1e-05 23.9 0.3 0.14 11.4 0.6 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 AXE1 PF05448.12 gi|300709435|ref|YP_003735249.1| - 2.2e-05 23.3 0.5 9.1e-05 21.3 0.5 1.8 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) DLH PF01738.18 gi|300709435|ref|YP_003735249.1| - 0.00012 21.7 0.0 0.00021 20.9 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 gi|300709435|ref|YP_003735249.1| - 0.0022 17.8 0.0 0.005 16.7 0.0 1.5 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Esterase PF00756.20 gi|300709435|ref|YP_003735249.1| - 0.091 12.4 0.1 0.21 11.2 0.1 1.7 1 1 0 1 1 1 0 Putative esterase DUF2892 PF11127.8 gi|300709436|ref|YP_003735250.1| - 1.4e-13 50.6 3.4 1.6e-13 50.5 3.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Flocculin_t3 PF13928.6 gi|300709437|ref|YP_003735251.1| - 0.02 15.4 0.2 0.025 15.1 0.2 1.1 1 0 0 1 1 1 0 Flocculin type 3 repeat UPRTase PF14681.6 gi|300709438|ref|YP_003735252.1| - 3.2e-46 157.4 0.0 3.7e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|300709438|ref|YP_003735252.1| - 4.1e-07 29.7 0.1 6e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|300709438|ref|YP_003735252.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosyl transferase PAP2 PF01569.21 gi|300709439|ref|YP_003735253.1| - 0.28 11.0 2.8 0.29 10.9 2.8 1.0 1 0 0 1 1 1 0 PAP2 superfamily Polyketide_cyc2 PF10604.9 gi|300709440|ref|YP_003735254.1| - 6.5e-05 23.2 1.7 0.00022 21.5 1.7 1.8 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport PUA PF01472.20 gi|300709440|ref|YP_003735254.1| - 0.054 13.5 0.0 0.085 12.8 0.0 1.3 1 0 0 1 1 1 0 PUA domain cobW PF02492.19 gi|300709441|ref|YP_003735255.1| - 4.8e-51 172.8 0.1 6e-51 172.5 0.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 gi|300709441|ref|YP_003735255.1| - 5.9e-25 87.0 0.1 1e-24 86.2 0.1 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 gi|300709441|ref|YP_003735255.1| - 0.00014 21.8 0.0 0.016 15.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|300709441|ref|YP_003735255.1| - 0.00092 19.6 2.3 0.0032 17.9 1.6 2.2 2 1 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 gi|300709441|ref|YP_003735255.1| - 0.0026 16.9 0.1 0.0043 16.2 0.1 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein GTP_EFTU PF00009.27 gi|300709441|ref|YP_003735255.1| - 0.0074 15.9 0.2 2.3 7.7 0.0 2.7 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain TsaE PF02367.17 gi|300709441|ref|YP_003735255.1| - 0.013 15.5 0.1 0.025 14.6 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TrwB_AAD_bind PF10412.9 gi|300709441|ref|YP_003735255.1| - 0.02 13.8 0.0 0.031 13.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_28 PF13521.6 gi|300709441|ref|YP_003735255.1| - 0.026 14.8 0.1 0.073 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|300709441|ref|YP_003735255.1| - 0.05 12.9 0.0 0.11 11.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 gi|300709441|ref|YP_003735255.1| - 0.071 13.0 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain CbiA PF01656.23 gi|300709441|ref|YP_003735255.1| - 0.099 12.7 0.0 0.14 12.2 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 gi|300709441|ref|YP_003735255.1| - 0.13 12.6 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|300709441|ref|YP_003735255.1| - 0.13 12.0 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|300709441|ref|YP_003735255.1| - 0.17 11.7 0.0 0.44 10.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|300709441|ref|YP_003735255.1| - 0.19 11.8 0.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|300709441|ref|YP_003735255.1| - 0.19 12.2 0.0 0.31 11.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_23 PF13476.6 gi|300709441|ref|YP_003735255.1| - 0.21 12.0 0.0 0.32 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|300709441|ref|YP_003735255.1| - 0.21 11.2 0.0 0.45 10.2 0.0 1.4 1 0 0 1 1 1 0 Guanylate kinase DAP3 PF10236.9 gi|300709441|ref|YP_003735255.1| - 0.22 10.7 0.1 0.33 10.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Glyoxalase PF00903.25 gi|300709442|ref|YP_003735256.1| - 1.2e-19 70.8 0.0 5.8e-19 68.6 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300709442|ref|YP_003735256.1| - 0.0016 18.7 0.2 0.37 11.1 0.0 3.1 2 1 1 3 3 3 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HicA_toxin PF07927.12 gi|300709442|ref|YP_003735256.1| - 0.015 15.4 0.0 0.031 14.3 0.0 1.5 1 0 0 1 1 1 0 HicA toxin of bacterial toxin-antitoxin, Glyoxalase PF00903.25 gi|300709443|ref|YP_003735257.1| - 6.8e-16 58.6 0.1 1.5e-09 38.2 0.0 2.5 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300709443|ref|YP_003735257.1| - 1.8e-08 35.1 2.9 1.9e-05 25.4 0.1 3.1 2 1 0 2 2 2 2 Glyoxalase-like domain CppA_N PF14506.6 gi|300709443|ref|YP_003735257.1| - 0.0092 16.0 0.0 0.16 12.1 0.0 2.1 2 0 0 2 2 2 1 CppA N-terminal Cytochrom_B559a PF00284.20 gi|300709444|ref|YP_003735258.1| - 0.018 14.8 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit ArsA_ATPase PF02374.15 gi|300709445|ref|YP_003735259.1| - 1.7e-67 227.8 0.0 2.2e-67 227.4 0.0 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 gi|300709445|ref|YP_003735259.1| - 2.2e-08 34.2 0.0 5.4e-08 32.9 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|300709445|ref|YP_003735259.1| - 4.9e-08 33.1 0.0 7.5e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|300709445|ref|YP_003735259.1| - 1.4e-07 31.2 0.5 0.006 16.1 2.4 3.2 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase ATPase PF06745.13 gi|300709445|ref|YP_003735259.1| - 0.014 14.7 0.0 0.03 13.7 0.0 1.5 1 1 0 1 1 1 0 KaiC SRP54 PF00448.22 gi|300709445|ref|YP_003735259.1| - 0.014 15.0 0.1 0.28 10.8 0.1 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 gi|300709445|ref|YP_003735259.1| - 0.023 14.2 0.0 0.11 11.9 0.0 1.9 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_33 PF13671.6 gi|300709445|ref|YP_003735259.1| - 0.03 14.5 0.4 0.076 13.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|300709445|ref|YP_003735259.1| - 0.031 13.9 2.5 0.081 12.5 2.5 1.9 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|300709445|ref|YP_003735259.1| - 0.083 12.3 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein CstA PF02554.14 gi|300709446|ref|YP_003735260.1| - 2.6e-106 355.7 24.3 2.6e-106 355.7 24.3 1.7 2 0 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 gi|300709446|ref|YP_003735260.1| - 1.4e-31 109.3 4.8 1.4e-31 109.3 4.8 4.4 4 0 0 4 4 4 1 5TM C-terminal transporter carbon starvation CstA FAM70 PF14967.6 gi|300709446|ref|YP_003735260.1| - 4.8 6.6 5.0 8.3 5.8 5.0 1.3 1 0 0 1 1 1 0 FAM70 protein Cupin_2 PF07883.11 gi|300709449|ref|YP_003735263.1| - 2e-13 49.8 0.2 2.7e-13 49.4 0.2 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|300709449|ref|YP_003735263.1| - 1.8e-05 24.7 0.0 2.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain 2CSK_N PF08521.10 gi|300709449|ref|YP_003735263.1| - 0.007 16.5 0.1 0.0098 16.0 0.1 1.3 1 1 0 1 1 1 1 Two-component sensor kinase N-terminal AraC_binding_2 PF14525.6 gi|300709449|ref|YP_003735263.1| - 0.015 15.0 0.0 0.016 14.9 0.0 1.3 1 0 0 1 1 1 0 AraC-binding-like domain DMSP_lyase PF16867.5 gi|300709449|ref|YP_003735263.1| - 0.025 14.2 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase Cupin_1 PF00190.22 gi|300709449|ref|YP_003735263.1| - 0.034 13.8 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 Cupin Cupin_7 PF12973.7 gi|300709449|ref|YP_003735263.1| - 0.077 12.9 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain cNMP_binding PF00027.29 gi|300709449|ref|YP_003735263.1| - 0.12 12.5 0.0 0.2 11.7 0.0 1.4 1 1 0 1 1 1 0 Cyclic nucleotide-binding domain PhoU PF01895.19 gi|300709451|ref|YP_003735265.1| - 0.015 15.8 2.6 4.3 7.9 0.5 2.8 2 1 0 2 2 2 0 PhoU domain PHO4 PF01384.20 gi|300709452|ref|YP_003735266.1| - 3.5e-47 161.1 27.8 3.5e-47 161.1 27.8 1.7 1 1 1 2 2 2 1 Phosphate transporter family DUF21 PF01595.20 gi|300709453|ref|YP_003735267.1| - 3e-50 170.4 1.1 4.2e-50 169.9 1.1 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|300709453|ref|YP_003735267.1| - 1.5e-21 76.2 1.6 4.3e-21 74.7 1.6 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|300709453|ref|YP_003735267.1| - 1.4e-14 54.3 3.7 1.3e-07 32.0 0.1 2.7 2 0 0 2 2 2 2 CBS domain CHU_C PF13585.6 gi|300709453|ref|YP_003735267.1| - 0.14 12.2 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 C-terminal domain of CHU protein family Sua5_yciO_yrdC PF01300.18 gi|300709454|ref|YP_003735268.1| - 8.2e-48 162.3 0.0 9.3e-48 162.1 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Cas_Cas4 PF01930.17 gi|300709455|ref|YP_003735269.1| - 6.8e-05 23.0 0.0 0.00074 19.7 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|300709455|ref|YP_003735269.1| - 0.0016 18.4 0.2 0.05 13.5 0.0 2.2 2 0 0 2 2 2 2 PD-(D/E)XK nuclease superfamily Exo5 PF09810.9 gi|300709455|ref|YP_003735269.1| - 0.12 11.8 0.1 2.6 7.5 0.1 2.1 2 0 0 2 2 2 0 Exonuclease V - a 5' deoxyribonuclease BioY PF02632.14 gi|300709457|ref|YP_003735271.1| - 2.8e-35 121.3 20.2 4.2e-35 120.7 20.2 1.2 1 0 0 1 1 1 1 BioY family ECF_trnsprt PF12822.7 gi|300709457|ref|YP_003735271.1| - 0.0024 18.0 17.1 0.023 14.8 17.0 2.0 1 1 0 1 1 1 1 ECF transporter, substrate-specific component ABC_tran PF00005.27 gi|300709458|ref|YP_003735272.1| - 1.2e-28 100.3 0.0 1.6e-28 99.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709458|ref|YP_003735272.1| - 1.9e-09 37.8 0.4 0.00016 21.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300709458|ref|YP_003735272.1| - 4.2e-06 26.3 0.0 0.074 12.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|300709458|ref|YP_003735272.1| - 9.7e-05 22.8 0.1 0.00014 22.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.6 gi|300709458|ref|YP_003735272.1| - 0.00021 21.5 0.1 0.0048 17.1 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|300709458|ref|YP_003735272.1| - 0.00048 19.8 0.0 0.00082 19.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|300709458|ref|YP_003735272.1| - 0.0056 16.8 0.0 0.017 15.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|300709458|ref|YP_003735272.1| - 0.0075 15.9 0.0 0.074 12.6 0.0 2.4 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|300709458|ref|YP_003735272.1| - 0.018 14.9 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase Mg_chelatase PF01078.21 gi|300709458|ref|YP_003735272.1| - 0.02 14.3 0.0 0.027 13.9 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 gi|300709458|ref|YP_003735272.1| - 0.044 14.3 0.0 0.062 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|300709458|ref|YP_003735272.1| - 0.059 13.4 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|300709458|ref|YP_003735272.1| - 0.062 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 gi|300709458|ref|YP_003735272.1| - 0.08 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|300709458|ref|YP_003735272.1| - 0.1 12.9 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|300709458|ref|YP_003735272.1| - 0.13 10.9 0.0 0.19 10.4 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein AAA_27 PF13514.6 gi|300709458|ref|YP_003735272.1| - 0.17 11.5 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain CbiQ PF02361.16 gi|300709459|ref|YP_003735273.1| - 1.2e-10 41.4 11.7 3.3e-10 40.0 11.7 1.6 1 1 0 1 1 1 1 Cobalt transport protein DUF2171 PF09939.9 gi|300709460|ref|YP_003735274.1| - 7.2e-05 23.0 0.2 9.5e-05 22.6 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2171) PRC PF05239.16 gi|300709460|ref|YP_003735274.1| - 0.00049 20.1 0.3 0.00062 19.8 0.3 1.4 1 1 0 1 1 1 1 PRC-barrel domain Molybdopterin PF00384.22 gi|300709461|ref|YP_003735275.1| - 3.6e-78 263.4 0.0 4.6e-78 263.1 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|300709461|ref|YP_003735275.1| - 2e-28 98.7 0.0 3.7e-28 97.8 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Fer2_4 PF13510.6 gi|300709461|ref|YP_003735275.1| - 8e-21 73.9 3.4 9.9e-21 73.6 1.9 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain NADH-G_4Fe-4S_3 PF10588.9 gi|300709461|ref|YP_003735275.1| - 1.4e-14 53.3 2.2 1.4e-14 53.3 2.2 2.3 2 0 0 2 2 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Molybdop_Fe4S4 PF04879.16 gi|300709461|ref|YP_003735275.1| - 2.2e-10 40.3 0.1 2.2e-10 40.3 0.1 2.3 2 0 0 2 2 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4_21 PF14697.6 gi|300709461|ref|YP_003735275.1| - 6.2e-09 35.9 7.8 6.2e-09 35.9 7.8 3.0 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300709461|ref|YP_003735275.1| - 3e-08 33.1 20.1 9.1e-05 22.1 1.1 3.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|300709461|ref|YP_003735275.1| - 6.9e-08 32.2 11.2 4.6e-05 23.3 1.5 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|300709461|ref|YP_003735275.1| - 8.4e-08 32.7 8.8 8.4e-08 32.7 8.8 3.8 3 2 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300709461|ref|YP_003735275.1| - 4.9e-07 29.8 13.5 0.0016 18.5 0.2 4.2 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300709461|ref|YP_003735275.1| - 7.3e-06 26.1 7.9 7.3e-06 26.1 7.9 4.1 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300709461|ref|YP_003735275.1| - 7e-05 23.7 11.4 0.0012 19.8 0.3 4.4 4 0 0 4 4 3 1 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|300709461|ref|YP_003735275.1| - 0.0001 22.6 7.4 0.0001 22.6 7.4 3.6 3 1 1 4 4 4 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300709461|ref|YP_003735275.1| - 0.015 15.3 2.5 0.015 15.3 2.5 4.9 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|300709461|ref|YP_003735275.1| - 0.06 13.6 12.9 0.26 11.5 1.6 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain CDC48_N PF02359.18 gi|300709461|ref|YP_003735275.1| - 0.09 13.0 0.0 0.29 11.3 0.0 1.8 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Fer4_15 PF13459.6 gi|300709461|ref|YP_003735275.1| - 0.11 13.2 20.7 0.044 14.5 1.8 4.8 4 0 0 4 4 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|300709461|ref|YP_003735275.1| - 1.4 9.5 20.3 0.91 10.1 3.7 3.4 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I NADH_4Fe-4S PF10589.9 gi|300709462|ref|YP_003735276.1| - 3.5e-19 68.7 0.3 6.8e-19 67.7 0.3 1.5 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Complex1_51K PF01512.17 gi|300709462|ref|YP_003735276.1| - 7.6e-19 68.1 0.0 1.4e-18 67.2 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit CCG PF02754.16 gi|300709463|ref|YP_003735277.1| - 7.6e-16 58.1 0.0 6.2e-11 42.4 0.0 2.5 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.6 gi|300709463|ref|YP_003735277.1| - 5.2e-10 39.3 9.3 2.8e-08 33.7 9.8 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300709463|ref|YP_003735277.1| - 1.4e-09 37.4 13.1 2.7e-05 23.8 1.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|300709463|ref|YP_003735277.1| - 2e-09 37.8 6.0 2.4e-09 37.5 4.4 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300709463|ref|YP_003735277.1| - 4.9e-09 36.2 7.2 8e-09 35.5 5.5 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300709463|ref|YP_003735277.1| - 1.1e-07 31.5 11.5 0.00019 21.3 1.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|300709463|ref|YP_003735277.1| - 2.1e-06 28.2 23.4 5.4e-06 26.9 12.3 2.3 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|300709463|ref|YP_003735277.1| - 7.2e-05 22.8 11.0 0.01 15.9 0.4 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300709463|ref|YP_003735277.1| - 0.0001 23.1 10.9 0.0017 19.2 11.6 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|300709463|ref|YP_003735277.1| - 0.00022 21.7 12.7 0.00036 21.0 10.2 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300709463|ref|YP_003735277.1| - 0.00023 21.1 23.2 0.00038 20.4 4.3 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300709463|ref|YP_003735277.1| - 0.00081 19.7 18.2 0.0045 17.4 1.0 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|300709463|ref|YP_003735277.1| - 0.0017 19.2 5.4 0.049 14.5 0.2 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Nitrate_red_gam PF02665.14 gi|300709463|ref|YP_003735277.1| - 0.0065 16.0 4.8 0.0065 16.0 4.8 1.6 2 0 0 2 2 1 1 Nitrate reductase gamma subunit Fer4_18 PF13746.6 gi|300709463|ref|YP_003735277.1| - 0.26 11.5 10.2 1.9 8.7 1.8 2.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|300709463|ref|YP_003735277.1| - 0.39 11.3 15.8 1.7 9.2 3.3 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|300709463|ref|YP_003735277.1| - 0.9 10.3 9.9 0.45 11.3 0.5 2.9 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|300709463|ref|YP_003735277.1| - 2.6 9.2 25.5 0.68 11.0 5.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain LDcluster4 PF18306.1 gi|300709464|ref|YP_003735278.1| - 2.7e-37 127.8 5.7 2.9e-37 127.7 5.7 1.0 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|300709464|ref|YP_003735278.1| - 6.1e-06 25.6 3.2 3.9e-05 23.0 2.0 2.0 1 1 1 2 2 2 1 DNA recombination-mediator protein A Lysine_decarbox PF03641.14 gi|300709464|ref|YP_003735278.1| - 6.5e-05 23.0 0.0 0.00011 22.3 0.0 1.3 1 1 0 1 1 1 1 Possible lysine decarboxylase ALAD PF00490.21 gi|300709465|ref|YP_003735279.1| - 2.8e-141 470.3 0.0 3.2e-141 470.1 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Ammonium_transp PF00909.21 gi|300709466|ref|YP_003735280.1| - 1.1e-91 307.5 43.8 1.4e-91 307.2 43.8 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.22 gi|300709466|ref|YP_003735280.1| - 6.5e-32 110.2 0.1 1.1e-31 109.4 0.1 1.4 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PsbY PF06298.11 gi|300709466|ref|YP_003735280.1| - 0.03 14.2 0.3 0.03 14.2 0.3 3.0 3 0 0 3 3 3 0 Photosystem II protein Y (PsbY) PBP_like_2 PF12849.7 gi|300709467|ref|YP_003735281.1| - 3.2e-28 99.2 1.1 4.1e-28 98.9 1.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|300709467|ref|YP_003735281.1| - 9.3e-07 28.8 0.0 2.9e-06 27.2 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|300709467|ref|YP_003735281.1| - 0.0041 16.3 0.0 0.0065 15.6 0.0 1.3 1 0 0 1 1 1 1 PBP superfamily domain TAT_signal PF10518.9 gi|300709467|ref|YP_003735281.1| - 0.21 11.5 9.8 0.21 11.5 6.8 2.4 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 gi|300709468|ref|YP_003735282.1| - 2.7e-13 50.1 12.5 4.1e-13 49.5 12.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|300709469|ref|YP_003735283.1| - 7.7e-34 117.2 0.0 1.2e-33 116.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709469|ref|YP_003735283.1| - 1.5e-13 51.3 0.0 2.7e-07 30.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300709469|ref|YP_003735283.1| - 2.8e-06 27.8 0.4 3.8e-05 24.1 0.4 2.1 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|300709469|ref|YP_003735283.1| - 9.1e-06 25.3 0.0 1.8e-05 24.3 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300709469|ref|YP_003735283.1| - 6.1e-05 22.7 0.0 0.0002 21.0 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|300709469|ref|YP_003735283.1| - 7.2e-05 23.1 0.0 0.0003 21.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300709469|ref|YP_003735283.1| - 0.00047 20.1 0.0 0.001 19.0 0.0 1.5 2 0 0 2 2 2 1 RsgA GTPase AAA_28 PF13521.6 gi|300709469|ref|YP_003735283.1| - 0.009 16.3 0.0 0.017 15.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|300709469|ref|YP_003735283.1| - 0.017 15.7 0.1 0.056 14.0 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|300709469|ref|YP_003735283.1| - 0.017 14.7 0.3 0.062 12.9 0.0 1.9 1 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|300709469|ref|YP_003735283.1| - 0.024 14.4 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|300709469|ref|YP_003735283.1| - 0.028 14.6 0.5 0.11 12.7 0.5 2.3 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|300709469|ref|YP_003735283.1| - 0.03 14.4 0.0 0.075 13.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 gi|300709469|ref|YP_003735283.1| - 0.033 13.9 0.0 0.05 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.6 gi|300709469|ref|YP_003735283.1| - 0.046 14.0 0.3 0.92 9.8 0.3 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Rad17 PF03215.15 gi|300709469|ref|YP_003735283.1| - 0.066 13.1 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_23 PF13476.6 gi|300709469|ref|YP_003735283.1| - 0.069 13.7 0.0 0.093 13.2 0.0 1.3 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|300709469|ref|YP_003735283.1| - 0.096 12.4 0.0 0.23 11.2 0.0 1.6 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|300709469|ref|YP_003735283.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 NACHT domain DUF2813 PF11398.8 gi|300709469|ref|YP_003735283.1| - 0.2 10.8 0.0 0.45 9.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) TOBE PF03459.17 gi|300709470|ref|YP_003735284.1| - 6e-17 61.7 2.0 6e-17 61.7 2.0 2.0 2 0 0 2 2 2 1 TOBE domain HTH_1 PF00126.27 gi|300709470|ref|YP_003735284.1| - 9.7e-10 38.3 0.2 2.8e-09 36.8 0.2 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TOBE_2 PF08402.10 gi|300709470|ref|YP_003735284.1| - 0.00042 20.4 1.5 0.00042 20.4 1.5 2.0 2 0 0 2 2 2 1 TOBE domain DUF1932 PF09130.11 gi|300709470|ref|YP_003735284.1| - 0.0022 17.9 0.0 0.0056 16.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1932) Lant_dehydr_C PF14028.6 gi|300709470|ref|YP_003735284.1| - 0.024 14.2 0.0 0.052 13.1 0.0 1.4 1 1 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Aminotran_3 PF00202.21 gi|300709471|ref|YP_003735285.1| - 3.4e-66 223.6 0.0 4.4e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|300709471|ref|YP_003735285.1| - 0.001 18.3 0.0 0.0022 17.2 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class I and II PAN_4 PF14295.6 gi|300709471|ref|YP_003735285.1| - 0.022 14.6 0.4 0.044 13.7 0.4 1.4 1 0 0 1 1 1 0 PAN domain Neuregulin PF02158.15 gi|300709471|ref|YP_003735285.1| - 0.14 11.5 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Neuregulin intracellular region DctM PF06808.12 gi|300709472|ref|YP_003735286.1| - 2.7e-80 270.3 52.4 4.3e-55 187.2 26.0 3.9 5 0 0 5 5 5 2 Tripartite ATP-independent periplasmic transporter, DctM component DUF1850 PF08905.11 gi|300709473|ref|YP_003735287.1| - 2.8e-23 82.1 0.0 4.1e-23 81.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1850) NMT1_3 PF16868.5 gi|300709474|ref|YP_003735288.1| - 2e-68 230.9 3.4 2.5e-68 230.6 3.4 1.0 1 0 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 gi|300709474|ref|YP_003735288.1| - 1e-06 28.6 3.4 1.9e-06 27.6 3.3 1.5 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 gi|300709474|ref|YP_003735288.1| - 1.2e-06 28.6 0.2 2.4e-06 27.6 0.2 1.6 1 1 0 1 1 1 1 NMT1/THI5 like BAT PF15915.5 gi|300709476|ref|YP_003735290.1| - 3.8e-17 62.6 3.3 5.1e-17 62.2 3.3 1.1 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_10 PF04967.12 gi|300709476|ref|YP_003735290.1| - 5e-12 45.4 0.0 8.6e-12 44.7 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.7 gi|300709476|ref|YP_003735290.1| - 0.015 15.2 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 MarR family Porphobil_deam PF01379.20 gi|300709477|ref|YP_003735291.1| - 1.1e-61 207.9 0.5 6.7e-48 162.9 0.1 2.2 2 0 0 2 2 2 2 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|300709477|ref|YP_003735291.1| - 1.3e-08 35.1 0.1 3.3e-08 33.8 0.1 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DUF211 PF02680.14 gi|300709477|ref|YP_003735291.1| - 0.0087 16.2 0.1 0.022 14.9 0.1 1.7 1 1 0 1 1 1 1 Uncharacterized ArCR, COG1888 TP_methylase PF00590.20 gi|300709478|ref|YP_003735292.1| - 2.3e-58 197.6 1.2 2.7e-58 197.4 1.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|300709478|ref|YP_003735292.1| - 4e-05 24.1 0.3 0.0013 19.1 0.2 2.2 1 1 0 1 1 1 1 Radical SAM superfamily FeoA PF04023.14 gi|300709478|ref|YP_003735292.1| - 0.0073 16.5 0.8 0.1 12.9 0.1 2.5 2 1 0 2 2 2 1 FeoA domain RFamide_26RFa PF11109.8 gi|300709478|ref|YP_003735292.1| - 0.16 12.4 0.6 0.25 11.8 0.6 1.3 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 HEM4 PF02602.15 gi|300709479|ref|YP_003735293.1| - 9.9e-36 123.2 1.1 1.2e-35 122.9 1.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD DAHP_snth_FXD PF18152.1 gi|300709479|ref|YP_003735293.1| - 0.16 11.8 0.0 0.45 10.4 0.0 1.8 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain Peptidase_S66C PF17676.1 gi|300709480|ref|YP_003735294.1| - 4.8e-25 88.5 0.0 7.2e-25 87.9 0.0 1.3 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain Peptidase_S66 PF02016.15 gi|300709480|ref|YP_003735294.1| - 5.4e-25 87.9 0.0 8.2e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 LD-carboxypeptidase N-terminal domain Flavin_Reduct PF01613.18 gi|300709480|ref|YP_003735294.1| - 0.022 14.8 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Flavin reductase like domain DHHA1 PF02272.19 gi|300709482|ref|YP_003735296.1| - 4.1e-17 62.9 1.2 1e-16 61.6 1.2 1.7 1 0 0 1 1 1 1 DHHA1 domain Ycf66_N PF07444.11 gi|300709483|ref|YP_003735297.1| - 1.4 9.1 11.2 0.77 9.9 8.1 1.9 2 0 0 2 2 2 0 Ycf66 protein N-terminus HTH_10 PF04967.12 gi|300709484|ref|YP_003735298.1| - 1e-18 66.9 0.0 2e-18 65.9 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300709484|ref|YP_003735298.1| - 5.5e-16 58.8 0.5 7.3e-16 58.4 0.5 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain MarR_2 PF12802.7 gi|300709484|ref|YP_003735298.1| - 0.0016 18.3 0.0 0.005 16.7 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|300709484|ref|YP_003735298.1| - 0.0087 15.6 0.0 0.018 14.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300709484|ref|YP_003735298.1| - 0.0088 15.8 0.1 0.019 14.8 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|300709484|ref|YP_003735298.1| - 0.014 14.9 0.1 0.03 13.8 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.22 gi|300709484|ref|YP_003735298.1| - 0.03 14.4 0.0 0.19 11.8 0.0 2.3 2 1 1 3 3 3 0 Helix-turn-helix DUF5605 PF18310.1 gi|300709485|ref|YP_003735299.1| - 0.014 15.3 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) NifU PF01106.17 gi|300709486|ref|YP_003735300.1| - 1.1e-13 51.1 0.0 1.4e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 NifU-like domain ApbA_C PF08546.11 gi|300709487|ref|YP_003735301.1| - 1.4e-30 106.1 0.1 2e-30 105.6 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 gi|300709487|ref|YP_003735301.1| - 1.1e-25 90.0 0.0 1.8e-25 89.4 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Rubredoxin_2 PF18073.1 gi|300709488|ref|YP_003735302.1| - 0.00045 19.9 2.6 0.045 13.5 0.1 2.3 2 0 0 2 2 2 2 Rubredoxin metal binding domain HypA PF01155.19 gi|300709488|ref|YP_003735302.1| - 0.0063 16.5 0.0 0.0073 16.3 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|300709488|ref|YP_003735302.1| - 0.063 13.0 2.2 0.1 12.3 2.2 1.3 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 gi|300709488|ref|YP_003735302.1| - 0.077 13.0 1.0 0.18 11.8 1.0 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-C2HC5 PF06221.13 gi|300709488|ref|YP_003735302.1| - 0.11 12.5 0.2 0.15 12.1 0.2 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zf-ribbon_3 PF13248.6 gi|300709488|ref|YP_003735302.1| - 0.18 11.3 2.8 0.47 9.9 0.9 2.1 2 0 0 2 2 2 0 zinc-ribbon domain NRDD PF13597.6 gi|300709488|ref|YP_003735302.1| - 0.26 10.0 0.3 0.33 9.7 0.3 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase HalOD2 PF18547.1 gi|300709488|ref|YP_003735302.1| - 0.41 10.6 6.1 1.4 8.8 0.1 3.0 3 0 0 3 3 3 0 Halobacterial output domain 2 zinc_ribbon_2 PF13240.6 gi|300709488|ref|YP_003735302.1| - 1.3 8.9 6.2 1.9 8.3 1.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain p450 PF00067.22 gi|300709489|ref|YP_003735303.1| - 3.2e-24 85.5 0.0 4.5e-19 68.5 0.0 2.9 2 1 0 2 2 2 2 Cytochrome P450 TetR_C_6 PF13977.6 gi|300709489|ref|YP_003735303.1| - 0.11 12.7 1.8 0.77 10.0 0.1 2.5 2 1 1 3 3 3 0 BetI-type transcriptional repressor, C-terminal PolC_DP2 PF03833.13 gi|300709490|ref|YP_003735304.1| - 0 1306.5 0.0 0 1304.9 0.0 1.7 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 HypA PF01155.19 gi|300709490|ref|YP_003735304.1| - 0.013 15.5 16.6 0.19 11.7 1.2 3.9 3 1 1 4 4 4 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|300709490|ref|YP_003735304.1| - 0.074 13.1 17.0 0.69 10.0 6.4 3.2 2 1 1 3 3 3 0 Double zinc ribbon tRNA-synt_1g PF09334.11 gi|300709490|ref|YP_003735304.1| - 0.15 10.8 1.6 0.49 9.1 1.5 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (M) zinc-ribbons_6 PF07191.12 gi|300709490|ref|YP_003735304.1| - 0.47 10.5 11.1 2.9 7.9 2.6 3.0 2 1 1 3 3 3 0 zinc-ribbons Ribosomal_L32p PF01783.23 gi|300709490|ref|YP_003735304.1| - 1.1 9.6 3.7 3.8 7.9 1.2 2.7 1 1 1 2 2 2 0 Ribosomal L32p protein family Zn-ribbon_8 PF09723.10 gi|300709490|ref|YP_003735304.1| - 2.2 8.5 23.6 0.52 10.5 3.3 4.1 3 1 0 3 3 3 0 Zinc ribbon domain zf-CHY PF05495.12 gi|300709490|ref|YP_003735304.1| - 3.4 8.2 5.8 4.9 7.7 0.8 2.5 2 0 0 2 2 2 0 CHY zinc finger Auto_anti-p27 PF06677.12 gi|300709490|ref|YP_003735304.1| - 7.9 6.7 9.8 3.5 7.9 1.1 3.0 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF296 PF03479.15 gi|300709491|ref|YP_003735305.1| - 1.1e-19 70.8 0.0 1.2e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain CAP59_mtransfer PF11735.8 gi|300709491|ref|YP_003735305.1| - 0.15 11.8 0.1 0.18 11.5 0.1 1.1 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 CBS PF00571.28 gi|300709493|ref|YP_003735307.1| - 1e-31 109.2 6.3 1.8e-11 44.3 0.3 4.1 4 0 0 4 4 4 4 CBS domain HGTP_anticodon PF03129.20 gi|300709494|ref|YP_003735308.1| - 1.1e-23 83.1 0.1 1.2e-22 79.8 0.0 2.4 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|300709494|ref|YP_003735308.1| - 2.3e-11 44.0 0.0 5.4e-09 36.3 0.0 2.6 2 1 0 2 2 2 2 tRNA synthetase class II core domain (G, H, P, S and T) zf-C2HE PF16278.5 gi|300709494|ref|YP_003735308.1| - 0.13 12.7 0.1 5.7 7.5 0.1 2.6 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger SpoIIM PF01944.17 gi|300709496|ref|YP_003735310.1| - 5.3e-24 85.0 10.5 5.3e-24 85.0 10.5 3.7 3 1 1 4 4 4 1 Stage II sporulation protein M DUF3040 PF11239.8 gi|300709496|ref|YP_003735310.1| - 0.072 13.4 0.5 0.072 13.4 0.5 6.4 5 1 0 6 6 6 0 Protein of unknown function (DUF3040) Methyltransf_11 PF08241.12 gi|300709497|ref|YP_003735311.1| - 8.9e-19 67.9 0.0 1.6e-18 67.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300709497|ref|YP_003735311.1| - 2.7e-16 60.1 0.0 5.3e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300709497|ref|YP_003735311.1| - 2.8e-13 49.9 0.0 3.4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300709497|ref|YP_003735311.1| - 6.5e-12 45.6 0.0 8.7e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300709497|ref|YP_003735311.1| - 8.5e-07 29.6 0.0 1.4e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300709497|ref|YP_003735311.1| - 4.9e-06 26.0 0.0 1.2e-05 24.8 0.0 1.5 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|300709497|ref|YP_003735311.1| - 0.00013 21.1 0.0 0.00017 20.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|300709497|ref|YP_003735311.1| - 0.0013 18.4 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 gi|300709497|ref|YP_003735311.1| - 0.0029 17.0 0.0 0.004 16.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain CMAS PF02353.20 gi|300709497|ref|YP_003735311.1| - 0.022 14.1 0.0 0.037 13.3 0.0 1.5 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|300709497|ref|YP_003735311.1| - 0.068 12.6 0.0 0.14 11.5 0.0 1.5 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) ATPase PF06745.13 gi|300709498|ref|YP_003735312.1| - 7.4e-06 25.5 0.1 9.5e-06 25.1 0.1 1.1 1 0 0 1 1 1 1 KaiC DUF835 PF05763.12 gi|300709498|ref|YP_003735312.1| - 0.065 13.0 0.0 0.1 12.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF835) G3P_antiterm PF04309.12 gi|300709498|ref|YP_003735312.1| - 0.2 11.1 0.0 1.1 8.6 0.0 1.8 1 1 1 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DUF2072 PF09845.9 gi|300709501|ref|YP_003735315.1| - 1.5e-41 141.8 0.0 1.8e-41 141.5 0.0 1.1 1 0 0 1 1 1 1 Zn-ribbon containing protein Zn-ribbon_8 PF09723.10 gi|300709501|ref|YP_003735315.1| - 0.0014 18.7 4.5 0.0031 17.6 4.5 1.6 1 0 0 1 1 1 1 Zinc ribbon domain DUF1451 PF07295.11 gi|300709501|ref|YP_003735315.1| - 0.0053 16.8 6.3 0.018 15.1 2.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon containing domain TFIIS_C PF01096.18 gi|300709501|ref|YP_003735315.1| - 0.014 15.2 1.2 4.1 7.4 0.0 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) HypA PF01155.19 gi|300709501|ref|YP_003735315.1| - 0.015 15.3 0.5 0.024 14.6 0.5 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|300709501|ref|YP_003735315.1| - 0.042 13.4 1.0 4.3 6.9 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|300709501|ref|YP_003735315.1| - 0.1 12.3 2.4 0.24 11.2 2.4 1.6 1 1 0 1 1 1 0 zinc-ribbon domain DUF4379 PF14311.6 gi|300709501|ref|YP_003735315.1| - 0.23 11.8 1.6 0.52 10.7 1.6 1.5 1 0 0 1 1 1 0 Probable Zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|300709501|ref|YP_003735315.1| - 0.36 10.6 1.7 0.72 9.6 1.7 1.5 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF2073 PF09846.9 gi|300709502|ref|YP_003735316.1| - 9e-46 154.1 0.6 1.4e-45 153.5 0.6 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) MMR_HSR1 PF01926.23 gi|300709503|ref|YP_003735317.1| - 8e-15 54.9 0.0 1.1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|300709503|ref|YP_003735317.1| - 7.6e-11 41.9 0.1 4.2e-05 23.2 0.0 3.0 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|300709503|ref|YP_003735317.1| - 7.1e-08 32.1 0.0 0.00012 21.6 0.0 2.7 2 1 0 2 2 2 2 ADP-ribosylation factor family FeoB_N PF02421.18 gi|300709503|ref|YP_003735317.1| - 8.7e-06 25.3 0.2 3.9e-05 23.2 0.2 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|300709503|ref|YP_003735317.1| - 4.8e-05 23.3 0.0 0.35 10.8 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase SRPRB PF09439.10 gi|300709503|ref|YP_003735317.1| - 0.00021 20.8 0.0 0.093 12.2 0.0 2.2 2 0 0 2 2 2 2 Signal recognition particle receptor beta subunit Ras PF00071.22 gi|300709503|ref|YP_003735317.1| - 0.00029 20.4 0.0 0.017 14.7 0.0 2.4 2 1 0 2 2 2 1 Ras family AAA_18 PF13238.6 gi|300709503|ref|YP_003735317.1| - 0.00036 21.1 0.0 0.0015 19.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain Roc PF08477.13 gi|300709503|ref|YP_003735317.1| - 0.00098 19.3 0.0 0.029 14.6 0.0 2.2 1 1 1 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Septin PF00735.18 gi|300709503|ref|YP_003735317.1| - 0.001 18.4 0.0 0.0015 17.9 0.0 1.3 1 1 0 1 1 1 1 Septin MMR_HSR1_Xtn PF16897.5 gi|300709503|ref|YP_003735317.1| - 0.002 18.1 0.0 0.0035 17.3 0.0 1.4 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AAA_24 PF13479.6 gi|300709503|ref|YP_003735317.1| - 0.0021 17.8 0.2 0.0068 16.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|300709503|ref|YP_003735317.1| - 0.0054 17.2 0.0 0.025 15.0 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|300709503|ref|YP_003735317.1| - 0.0067 15.7 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_28 PF13521.6 gi|300709503|ref|YP_003735317.1| - 0.0067 16.7 0.1 0.049 13.9 0.0 2.0 1 1 1 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|300709503|ref|YP_003735317.1| - 0.0078 16.2 0.0 0.024 14.6 0.0 1.9 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Dynamin_N PF00350.23 gi|300709503|ref|YP_003735317.1| - 0.011 15.8 0.0 1.1 9.2 0.0 2.3 1 1 1 2 2 2 0 Dynamin family RNA_helicase PF00910.22 gi|300709503|ref|YP_003735317.1| - 0.012 16.0 0.0 0.019 15.3 0.0 1.4 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 gi|300709503|ref|YP_003735317.1| - 0.019 15.5 0.0 0.034 14.7 0.0 1.4 1 1 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 gi|300709503|ref|YP_003735317.1| - 0.02 15.3 0.0 0.035 14.5 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain MeaB PF03308.16 gi|300709503|ref|YP_003735317.1| - 0.03 13.3 0.0 1.7 7.6 0.0 2.4 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RuvB_N PF05496.12 gi|300709503|ref|YP_003735317.1| - 0.034 13.9 0.0 0.072 12.8 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 gi|300709503|ref|YP_003735317.1| - 0.052 13.5 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 gi|300709503|ref|YP_003735317.1| - 0.064 12.8 0.0 0.17 11.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain cobW PF02492.19 gi|300709503|ref|YP_003735317.1| - 0.07 12.7 0.0 9.1 5.8 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Parvo_NS1 PF01057.17 gi|300709503|ref|YP_003735317.1| - 0.11 11.5 0.0 0.22 10.6 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Gtr1_RagA PF04670.12 gi|300709503|ref|YP_003735317.1| - 0.13 11.6 0.0 1.3 8.3 0.0 2.1 2 1 0 2 2 2 0 Gtr1/RagA G protein conserved region AAA_22 PF13401.6 gi|300709503|ref|YP_003735317.1| - 0.17 12.2 0.0 0.28 11.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain Cdc6_C PF09079.11 gi|300709504|ref|YP_003735318.1| - 5e-24 84.1 0.1 1.3e-23 82.7 0.1 1.8 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_16 PF13191.6 gi|300709504|ref|YP_003735318.1| - 2.7e-11 44.1 0.1 9.1e-11 42.4 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|300709504|ref|YP_003735318.1| - 4.5e-10 39.9 0.8 3.9e-08 33.7 0.8 2.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|300709504|ref|YP_003735318.1| - 9.7e-09 35.8 0.0 0.0015 19.0 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|300709504|ref|YP_003735318.1| - 3.4e-05 23.9 0.1 7.4e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea TniB PF05621.11 gi|300709504|ref|YP_003735318.1| - 0.00031 20.2 0.2 0.0028 17.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_2 PF07724.14 gi|300709504|ref|YP_003735318.1| - 0.00069 19.8 0.0 0.0016 18.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) Sigma54_activat PF00158.26 gi|300709504|ref|YP_003735318.1| - 0.00099 18.8 0.0 0.0023 17.7 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|300709504|ref|YP_003735318.1| - 0.0012 18.6 0.1 0.0041 16.9 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|300709504|ref|YP_003735318.1| - 0.0017 17.5 0.0 0.0033 16.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) T2SSE PF00437.20 gi|300709504|ref|YP_003735318.1| - 0.004 16.3 0.0 0.0087 15.1 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_assoc_2 PF16193.5 gi|300709504|ref|YP_003735318.1| - 0.012 15.9 0.3 0.043 14.2 0.3 1.9 1 0 0 1 1 1 0 AAA C-terminal domain NB-ARC PF00931.22 gi|300709504|ref|YP_003735318.1| - 0.013 14.8 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 gi|300709504|ref|YP_003735318.1| - 0.019 14.7 0.5 0.12 12.1 0.5 2.1 1 1 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|300709504|ref|YP_003735318.1| - 0.021 14.1 0.2 0.12 11.6 0.2 2.0 1 1 0 1 1 1 0 KAP family P-loop domain DEAD PF00270.29 gi|300709504|ref|YP_003735318.1| - 0.029 14.2 1.5 0.093 12.5 0.8 2.2 2 1 0 2 2 1 0 DEAD/DEAH box helicase DNA_pol3_delta2 PF13177.6 gi|300709504|ref|YP_003735318.1| - 0.037 13.8 0.0 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 DNA polymerase III, delta subunit Rad17 PF03215.15 gi|300709504|ref|YP_003735318.1| - 0.039 13.9 0.1 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 Rad17 P-loop domain ABC_tran PF00005.27 gi|300709504|ref|YP_003735318.1| - 0.039 14.5 0.1 0.11 13.1 0.0 1.9 2 1 0 2 2 1 0 ABC transporter AAA_32 PF13654.6 gi|300709504|ref|YP_003735318.1| - 0.039 12.7 1.5 4.3 6.0 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|300709504|ref|YP_003735318.1| - 0.046 13.2 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF87 PF01935.17 gi|300709504|ref|YP_003735318.1| - 0.054 13.6 0.7 5 7.2 0.1 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_25 PF13481.6 gi|300709504|ref|YP_003735318.1| - 0.071 12.7 0.1 0.35 10.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|300709504|ref|YP_003735318.1| - 0.076 13.4 0.1 0.18 12.2 0.0 1.7 2 0 0 2 2 1 0 RNA helicase FtsK_SpoIIIE PF01580.18 gi|300709504|ref|YP_003735318.1| - 0.078 12.3 0.2 0.24 10.7 0.1 1.9 1 1 0 1 1 1 0 FtsK/SpoIIIE family AAA_18 PF13238.6 gi|300709504|ref|YP_003735318.1| - 0.084 13.4 0.0 0.22 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_lid_10 PF17872.1 gi|300709504|ref|YP_003735318.1| - 0.09 12.9 0.2 0.75 9.9 0.1 2.2 2 0 0 2 2 2 0 AAA lid domain Bac_DnaA PF00308.18 gi|300709504|ref|YP_003735318.1| - 0.096 12.5 0.4 0.95 9.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial dnaA protein NACHT PF05729.12 gi|300709504|ref|YP_003735318.1| - 0.16 11.9 0.2 0.87 9.5 0.2 2.1 1 1 0 1 1 1 0 NACHT domain KfrA_N PF11740.8 gi|300709504|ref|YP_003735318.1| - 0.22 12.2 0.1 0.22 12.2 0.1 2.2 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term MutS_III PF05192.18 gi|300709504|ref|YP_003735318.1| - 0.32 11.2 4.3 1.9 8.7 4.3 2.1 1 1 0 1 1 1 0 MutS domain III Peptidase_S24 PF00717.23 gi|300709505|ref|YP_003735319.1| - 0.00033 20.6 0.7 0.00089 19.2 0.7 1.7 1 1 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.16 gi|300709506|ref|YP_003735320.1| - 2.4e-14 53.2 0.0 3.5e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.7 gi|300709506|ref|YP_003735320.1| - 7.1e-13 49.1 0.3 2.3e-12 47.4 0.3 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|300709506|ref|YP_003735320.1| - 2.8e-10 41.1 0.1 6.7e-10 39.8 0.1 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.25 gi|300709506|ref|YP_003735320.1| - 0.057 13.4 0.0 0.16 12.0 0.0 1.7 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain AA_kinase PF00696.28 gi|300709507|ref|YP_003735321.1| - 1.7e-46 158.8 2.9 2.3e-46 158.3 2.9 1.2 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.6 gi|300709507|ref|YP_003735321.1| - 1.3e-16 60.1 0.1 1.4e-07 31.2 0.0 2.8 3 0 0 3 3 3 2 ACT domain ACT PF01842.25 gi|300709507|ref|YP_003735321.1| - 1.1e-09 37.8 3.2 4.7e-06 26.3 0.0 3.4 3 0 0 3 3 3 2 ACT domain ACT_4 PF13291.6 gi|300709507|ref|YP_003735321.1| - 0.0051 17.4 0.2 0.26 11.9 0.0 2.7 3 0 0 3 3 3 1 ACT domain BON PF04972.17 gi|300709507|ref|YP_003735321.1| - 0.031 14.6 0.8 0.11 12.8 0.0 2.3 2 0 0 2 2 2 0 BON domain Metallophos_2 PF12850.7 gi|300709508|ref|YP_003735322.1| - 4.3e-31 108.3 0.0 5.3e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|300709508|ref|YP_003735322.1| - 4.2e-11 43.7 0.2 2.9e-10 41.0 0.2 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase IMP_cyclohyd PF07826.11 gi|300709509|ref|YP_003735323.1| - 2.1e-67 226.5 0.0 2.4e-67 226.3 0.0 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein Vpu PF00558.19 gi|300709510|ref|YP_003735324.1| - 0.078 12.8 0.2 0.1 12.4 0.2 1.2 1 0 0 1 1 1 0 Vpu protein Nucleoporin2 PF04096.14 gi|300709510|ref|YP_003735324.1| - 0.084 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Nucleoporin autopeptidase CSD PF00313.22 gi|300709511|ref|YP_003735325.1| - 1.9e-19 69.2 0.1 2.1e-19 69.1 0.1 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 gi|300709511|ref|YP_003735325.1| - 0.041 13.6 2.7 0.059 13.1 2.7 1.3 1 0 0 1 1 1 0 Ribonuclease B OB domain S1-like PF14444.6 gi|300709511|ref|YP_003735325.1| - 0.051 13.5 0.3 0.062 13.2 0.3 1.3 1 1 0 1 1 1 0 S1-like adh_short PF00106.25 gi|300709512|ref|YP_003735326.1| - 8.8e-26 90.6 0.0 5e-25 88.1 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300709512|ref|YP_003735326.1| - 5.9e-15 55.5 0.1 7.9e-15 55.0 0.1 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|300709512|ref|YP_003735326.1| - 6e-07 29.5 0.1 9.2e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300709512|ref|YP_003735326.1| - 0.00016 21.2 0.0 0.00021 20.8 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|300709512|ref|YP_003735326.1| - 0.018 14.2 0.0 0.035 13.2 0.0 1.5 1 0 0 1 1 1 0 RmlD substrate binding domain DUF4350 PF14258.6 gi|300709512|ref|YP_003735326.1| - 0.085 13.3 0.0 0.26 11.8 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) YdjM PF04307.14 gi|300709513|ref|YP_003735327.1| - 1.1e-10 41.2 2.5 1.3e-10 40.9 2.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase HCV_NS4b PF01001.19 gi|300709513|ref|YP_003735327.1| - 0.072 12.7 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4b ADH_N_2 PF16884.5 gi|300709514|ref|YP_003735328.1| - 3.5e-42 142.7 0.4 7.3e-42 141.7 0.1 1.7 2 0 0 2 2 2 1 N-terminal domain of oxidoreductase ADH_zinc_N PF00107.26 gi|300709514|ref|YP_003735328.1| - 8.1e-19 67.9 0.1 1.6e-18 66.9 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|300709514|ref|YP_003735328.1| - 1.3e-08 35.9 0.0 2.7e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DAO PF01266.24 gi|300709515|ref|YP_003735329.1| - 3.1e-53 181.6 7.0 3.6e-53 181.4 7.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300709515|ref|YP_003735329.1| - 2.4e-15 56.6 4.6 4.4e-15 55.7 4.6 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|300709515|ref|YP_003735329.1| - 5.1e-09 35.8 4.1 2.4e-08 33.6 4.1 1.8 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300709515|ref|YP_003735329.1| - 2.4e-08 33.6 0.0 6.2e-08 32.2 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|300709515|ref|YP_003735329.1| - 2.1e-06 27.4 5.1 0.00072 19.0 0.1 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|300709515|ref|YP_003735329.1| - 0.00028 21.0 3.0 0.00035 20.8 1.4 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|300709515|ref|YP_003735329.1| - 0.00031 21.2 1.3 0.00094 19.7 1.3 1.8 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|300709515|ref|YP_003735329.1| - 0.0017 17.6 2.0 0.66 9.0 1.3 2.1 2 0 0 2 2 2 2 Glucose inhibited division protein A ApbA PF02558.16 gi|300709515|ref|YP_003735329.1| - 0.0027 17.4 0.1 0.034 13.8 0.2 2.5 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|300709515|ref|YP_003735329.1| - 0.02 15.3 0.0 0.052 14.0 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|300709515|ref|YP_003735329.1| - 0.022 14.6 1.8 0.044 13.7 1.4 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|300709515|ref|YP_003735329.1| - 0.034 13.4 0.8 0.062 12.6 0.2 1.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300709515|ref|YP_003735329.1| - 0.063 12.0 1.3 0.12 11.0 0.9 1.6 2 0 0 2 2 2 0 HI0933-like protein PALP PF00291.25 gi|300709515|ref|YP_003735329.1| - 0.064 12.7 1.1 0.12 11.7 1.1 1.4 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Lycopene_cycl PF05834.12 gi|300709515|ref|YP_003735329.1| - 0.093 11.8 1.8 0.94 8.5 0.4 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein Sacchrp_dh_NADP PF03435.18 gi|300709515|ref|YP_003735329.1| - 0.14 12.4 2.1 0.54 10.5 0.6 2.3 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain LysE PF01810.18 gi|300709516|ref|YP_003735330.1| - 0.013 15.0 0.7 0.013 14.9 0.7 1.0 1 0 0 1 1 1 0 LysE type translocator Lambda_tail_I PF06805.12 gi|300709516|ref|YP_003735330.1| - 0.029 14.7 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I DUF456 PF04306.13 gi|300709517|ref|YP_003735331.1| - 2.2e-24 86.3 26.1 2.2e-24 86.3 26.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF456) Na_Ca_ex PF01699.24 gi|300709517|ref|YP_003735331.1| - 0.02 14.8 17.9 0.041 13.9 17.9 1.7 1 1 0 1 1 1 0 Sodium/calcium exchanger protein Oxidored_FMN PF00724.20 gi|300709518|ref|YP_003735332.1| - 3.8e-42 144.8 0.0 1.9e-37 129.3 0.0 2.1 2 0 0 2 2 2 2 NADH:flavin oxidoreductase / NADH oxidase family Dus PF01207.17 gi|300709518|ref|YP_003735332.1| - 0.025 13.7 0.0 0.078 12.0 0.0 1.8 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|300709518|ref|YP_003735332.1| - 0.026 13.9 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase His_biosynth PF00977.21 gi|300709518|ref|YP_003735332.1| - 0.06 12.8 0.0 0.18 11.2 0.0 1.7 2 0 0 2 2 2 0 Histidine biosynthesis protein CGI-121 PF08617.10 gi|300709520|ref|YP_003735334.1| - 3.5e-11 43.5 0.0 4.1e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Kinase binding protein CGI-121 PTS-HPr PF00381.19 gi|300709520|ref|YP_003735334.1| - 0.081 13.2 0.2 0.12 12.6 0.2 1.5 1 0 0 1 1 1 0 PTS HPr component phosphorylation site THB PF18362.1 gi|300709520|ref|YP_003735334.1| - 0.23 11.1 0.4 0.53 9.9 0.1 1.7 2 0 0 2 2 2 0 Tri-helix bundle domain DEAD PF00270.29 gi|300709521|ref|YP_003735335.1| - 2.3e-24 86.1 0.0 4.1e-24 85.3 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|300709521|ref|YP_003735335.1| - 4.6e-08 33.2 0.0 8.8e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|300709521|ref|YP_003735335.1| - 8.3e-06 26.1 0.0 0.00018 21.8 0.0 2.8 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DNA_pol_lambd_f PF10391.9 gi|300709521|ref|YP_003735335.1| - 0.0086 15.9 0.1 0.029 14.2 0.1 1.9 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_5 PF14520.6 gi|300709521|ref|YP_003735335.1| - 0.016 15.8 0.0 0.062 13.9 0.0 2.1 1 0 0 1 1 1 0 Helix-hairpin-helix domain HSA PF07529.13 gi|300709521|ref|YP_003735335.1| - 0.056 13.8 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 HSA TfoX_C PF04994.13 gi|300709521|ref|YP_003735335.1| - 0.076 13.1 0.0 0.22 11.6 0.0 1.8 1 0 0 1 1 1 0 TfoX C-terminal domain Fer4_15 PF13459.6 gi|300709522|ref|YP_003735336.1| - 1.1e-18 67.7 2.7 1.3e-18 67.5 2.7 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|300709522|ref|YP_003735336.1| - 5.3e-06 26.9 1.6 1.4e-05 25.6 1.6 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4 PF00037.27 gi|300709522|ref|YP_003735336.1| - 0.0025 17.6 5.5 0.3 11.0 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|300709522|ref|YP_003735336.1| - 0.0057 16.7 2.8 0.15 12.1 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|300709522|ref|YP_003735336.1| - 0.34 11.1 2.0 0.43 10.8 0.1 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain Cupin_2 PF07883.11 gi|300709523|ref|YP_003735337.1| - 5.6e-16 58.0 0.1 8.8e-16 57.4 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|300709523|ref|YP_003735337.1| - 5.2e-05 22.8 0.0 0.00013 21.5 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF861) AraC_binding PF02311.19 gi|300709523|ref|YP_003735337.1| - 0.00046 20.1 0.1 0.00076 19.4 0.1 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|300709523|ref|YP_003735337.1| - 0.17 11.5 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Cupin Ldh_1_N PF00056.23 gi|300709524|ref|YP_003735338.1| - 2.8e-40 137.7 0.4 3.9e-40 137.2 0.4 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|300709524|ref|YP_003735338.1| - 2.3e-25 89.5 0.0 3.8e-25 88.7 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Auto_anti-p27 PF06677.12 gi|300709525|ref|YP_003735339.1| - 1.1e-14 54.2 0.4 1.6e-14 53.8 0.4 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 gi|300709525|ref|YP_003735339.1| - 0.002 18.1 2.2 0.0036 17.3 2.2 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.12 gi|300709525|ref|YP_003735339.1| - 0.047 13.7 0.8 0.073 13.1 0.8 1.3 1 0 0 1 1 1 0 zinc-ribbons HscB_4_cys PF18256.1 gi|300709525|ref|YP_003735339.1| - 0.052 13.4 3.8 0.15 11.9 3.8 1.8 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif zinc_ribbon_15 PF17032.5 gi|300709525|ref|YP_003735339.1| - 0.15 12.9 1.0 0.24 12.2 1.0 1.3 1 0 0 1 1 1 0 zinc-ribbon family TP2 PF01254.18 gi|300709525|ref|YP_003735339.1| - 0.27 11.9 7.1 0.18 12.4 5.3 1.7 1 1 0 1 1 1 0 Nuclear transition protein 2 zf-ribbon_3 PF13248.6 gi|300709525|ref|YP_003735339.1| - 0.61 9.6 3.7 1.8 8.1 3.7 1.7 1 1 0 1 1 1 0 zinc-ribbon domain SPX PF03105.19 gi|300709525|ref|YP_003735339.1| - 1.5 8.6 9.9 2 8.3 9.9 1.1 1 0 0 1 1 1 0 SPX domain PTS_2-RNA PF01885.16 gi|300709526|ref|YP_003735340.1| - 4.3e-25 88.8 0.0 5.4e-25 88.5 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PARP PF00644.20 gi|300709526|ref|YP_003735340.1| - 0.1 12.1 0.0 0.47 10.0 0.0 1.8 2 0 0 2 2 2 0 Poly(ADP-ribose) polymerase catalytic domain AMP-binding PF00501.28 gi|300709527|ref|YP_003735341.1| - 1.1e-90 304.2 0.0 1.3e-90 304.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300709527|ref|YP_003735341.1| - 1.8e-20 73.7 1.6 1.8e-20 73.7 1.6 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Helicase_C PF00271.31 gi|300709530|ref|YP_003735344.1| - 2.1e-22 79.5 0.0 7e-22 77.9 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC4 PF02732.15 gi|300709530|ref|YP_003735344.1| - 1.5e-21 77.3 0.0 1.2e-20 74.3 0.0 2.3 2 0 0 2 2 2 1 ERCC4 domain DEAD PF00270.29 gi|300709530|ref|YP_003735344.1| - 1.2e-15 57.7 0.0 3.1e-15 56.4 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|300709530|ref|YP_003735344.1| - 5.8e-12 45.9 0.0 1.2e-11 45.0 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_5 PF14520.6 gi|300709530|ref|YP_003735344.1| - 3.8e-10 40.2 1.4 1.6e-09 38.2 0.2 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|300709530|ref|YP_003735344.1| - 5.7e-09 35.9 1.1 1.3e-08 34.8 0.2 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|300709530|ref|YP_003735344.1| - 3e-08 33.1 2.2 5.6e-06 25.9 0.2 3.5 3 0 0 3 3 3 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|300709530|ref|YP_003735344.1| - 0.034 14.7 0.1 0.15 12.7 0.0 2.1 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Ribosomal_S30AE PF02482.19 gi|300709530|ref|YP_003735344.1| - 0.053 14.3 0.2 0.16 12.7 0.2 1.9 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein TauE PF01925.19 gi|300709531|ref|YP_003735345.1| - 3.2e-32 112.1 43.1 4e-32 111.8 43.1 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE UvrB_inter PF17757.1 gi|300709532|ref|YP_003735346.1| - 5.3e-32 109.8 0.0 2.1e-31 108.0 0.0 2.1 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|300709532|ref|YP_003735346.1| - 2.2e-19 69.0 1.2 2.2e-19 69.0 1.2 1.9 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|300709532|ref|YP_003735346.1| - 1.2e-16 61.0 0.3 3.6e-16 59.5 0.1 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain UVR PF02151.19 gi|300709532|ref|YP_003735346.1| - 1.9e-09 37.0 6.8 1.9e-09 37.0 6.8 2.9 3 0 0 3 3 3 1 UvrB/uvrC motif ResIII PF04851.15 gi|300709532|ref|YP_003735346.1| - 1e-06 28.8 0.0 2.1e-05 24.6 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UB2H PF14814.6 gi|300709532|ref|YP_003735346.1| - 0.0029 17.6 0.0 0.016 15.2 0.0 2.3 1 1 0 1 1 1 1 Bifunctional transglycosylase second domain AAA_30 PF13604.6 gi|300709532|ref|YP_003735346.1| - 0.003 17.3 0.0 0.27 10.9 0.0 3.0 3 0 0 3 3 3 1 AAA domain DEAD PF00270.29 gi|300709532|ref|YP_003735346.1| - 0.0081 16.0 0.0 0.058 13.2 0.0 2.4 3 0 0 3 3 3 1 DEAD/DEAH box helicase MEDS PF14417.6 gi|300709532|ref|YP_003735346.1| - 0.082 12.7 0.9 0.37 10.6 0.1 2.6 3 0 0 3 3 3 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Met_synt_B12 PF02965.17 gi|300709532|ref|YP_003735346.1| - 0.14 11.6 1.3 0.21 11.0 0.1 1.8 2 0 0 2 2 2 0 Vitamin B12 dependent methionine synthase, activation domain DBI_PRT PF02277.17 gi|300709533|ref|YP_003735347.1| - 3.5e-08 33.1 5.0 4.7e-07 29.4 5.0 2.1 1 1 1 2 2 2 2 Phosphoribosyltransferase Ribonuc_red_lgC PF02867.15 gi|300709534|ref|YP_003735348.1| - 4.6e-176 586.4 0.0 5.4e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|300709534|ref|YP_003735348.1| - 3.2e-23 81.5 0.7 7.2e-23 80.4 0.0 2.0 2 0 0 2 2 2 1 Ribonucleotide reductase, all-alpha domain Ribonuc_red_sm PF00268.21 gi|300709535|ref|YP_003735349.1| - 2.1e-84 283.3 0.0 3.5e-84 282.6 0.0 1.3 2 0 0 2 2 2 1 Ribonucleotide reductase, small chain Rubrerythrin PF02915.17 gi|300709535|ref|YP_003735349.1| - 0.031 14.7 0.0 0.49 10.8 0.0 2.3 2 0 0 2 2 2 0 Rubrerythrin HTH_24 PF13412.6 gi|300709536|ref|YP_003735350.1| - 1.7e-07 30.7 0.0 2.7e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300709536|ref|YP_003735350.1| - 6.6e-07 29.1 0.1 1.6e-06 27.9 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|300709536|ref|YP_003735350.1| - 4e-05 23.5 0.0 0.0001 22.2 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|300709536|ref|YP_003735350.1| - 8.6e-05 22.3 0.0 0.00027 20.7 0.0 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 gi|300709536|ref|YP_003735350.1| - 0.00026 20.8 0.0 0.00043 20.1 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300709536|ref|YP_003735350.1| - 0.00063 19.6 0.1 0.0017 18.2 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|300709536|ref|YP_003735350.1| - 0.0012 19.3 0.0 0.004 17.6 0.0 2.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|300709536|ref|YP_003735350.1| - 0.0025 17.6 0.0 0.0045 16.7 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_13 PF11972.8 gi|300709536|ref|YP_003735350.1| - 0.0057 16.7 0.0 0.018 15.1 0.0 1.8 1 0 0 1 1 1 1 HTH DNA binding domain HTH_23 PF13384.6 gi|300709536|ref|YP_003735350.1| - 0.0068 16.2 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain FaeA PF04703.12 gi|300709536|ref|YP_003735350.1| - 0.0089 16.4 0.0 0.023 15.1 0.0 1.7 1 0 0 1 1 1 1 FaeA-like protein HTH_3 PF01381.22 gi|300709536|ref|YP_003735350.1| - 0.013 15.5 0.0 0.028 14.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix HTH_31 PF13560.6 gi|300709536|ref|YP_003735350.1| - 0.018 15.4 0.1 0.094 13.1 0.1 2.4 2 0 0 2 2 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|300709536|ref|YP_003735350.1| - 0.022 15.1 0.0 0.059 13.7 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_5 PF01022.20 gi|300709536|ref|YP_003735350.1| - 0.025 14.5 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300709536|ref|YP_003735350.1| - 0.054 13.6 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|300709536|ref|YP_003735350.1| - 0.073 13.0 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 HTH domain HTH_45 PF14947.6 gi|300709536|ref|YP_003735350.1| - 0.09 12.8 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix YdaS_antitoxin PF15943.5 gi|300709536|ref|YP_003735350.1| - 0.11 12.4 0.0 0.27 11.1 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT P22_Cro PF14549.6 gi|300709536|ref|YP_003735350.1| - 0.11 12.4 0.1 0.34 10.8 0.1 1.8 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Mrr_N PF14338.6 gi|300709536|ref|YP_003735350.1| - 0.12 12.5 0.0 0.38 10.9 0.0 1.9 1 1 0 1 1 1 0 Mrr N-terminal domain UvrC_HhH_N PF08459.11 gi|300709537|ref|YP_003735351.1| - 3.8e-38 130.8 0.0 1.9e-37 128.5 0.0 1.9 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal HHH_5 PF14520.6 gi|300709537|ref|YP_003735351.1| - 1.2e-12 48.3 0.0 3.8e-12 46.6 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 gi|300709537|ref|YP_003735351.1| - 3.2e-12 45.6 0.3 3.4e-08 32.9 0.1 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|300709537|ref|YP_003735351.1| - 2.2e-09 37.3 0.0 6.7e-09 35.7 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif GIY-YIG PF01541.24 gi|300709537|ref|YP_003735351.1| - 6.4e-08 32.8 0.0 1.2e-07 31.9 0.0 1.5 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|300709537|ref|YP_003735351.1| - 2.1e-07 30.4 1.7 4.7e-07 29.3 1.7 1.6 1 0 0 1 1 1 1 UvrB/uvrC motif 5_3_exonuc PF01367.20 gi|300709537|ref|YP_003735351.1| - 9.3e-06 26.2 0.0 0.0036 17.9 0.0 2.9 2 1 1 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HHH_3 PF12836.7 gi|300709537|ref|YP_003735351.1| - 0.00077 19.7 0.0 0.017 15.4 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|300709537|ref|YP_003735351.1| - 0.0058 17.0 0.0 1.4 9.4 0.0 3.3 3 0 0 3 3 3 1 Helix-hairpin-helix domain IMS_HHH PF11798.8 gi|300709537|ref|YP_003735351.1| - 0.081 13.3 0.0 1.5 9.3 0.0 2.5 2 0 0 2 2 2 0 IMS family HHH motif ABC2_membrane_3 PF12698.7 gi|300709538|ref|YP_003735352.1| - 0.0046 16.1 0.6 0.006 15.7 0.6 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein Phage_holin_2_4 PF16082.5 gi|300709538|ref|YP_003735352.1| - 0.033 13.9 1.8 0.033 13.9 1.8 1.9 1 1 1 2 2 2 0 Bacteriophage holin family, superfamily II-like Phage_holin_3_6 PF07332.11 gi|300709538|ref|YP_003735352.1| - 0.2 11.7 9.8 0.28 11.2 9.8 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ABC_tran PF00005.27 gi|300709540|ref|YP_003735354.1| - 3.9e-29 101.9 0.0 6e-29 101.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709540|ref|YP_003735354.1| - 3.6e-09 36.9 0.1 1.2e-05 25.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|300709540|ref|YP_003735354.1| - 4.7e-08 33.6 0.0 1.5e-07 32.0 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|300709540|ref|YP_003735354.1| - 0.0029 17.3 0.1 0.014 15.1 0.0 2.1 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|300709540|ref|YP_003735354.1| - 0.012 15.6 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|300709540|ref|YP_003735354.1| - 0.019 15.4 0.0 0.044 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|300709540|ref|YP_003735354.1| - 0.019 15.4 0.0 0.032 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|300709540|ref|YP_003735354.1| - 0.034 14.4 0.0 0.13 12.6 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|300709540|ref|YP_003735354.1| - 0.038 13.7 0.0 0.085 12.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 gi|300709540|ref|YP_003735354.1| - 0.085 12.6 0.0 1.8 8.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC2_membrane_2 PF12679.7 gi|300709541|ref|YP_003735355.1| - 1.2e-53 182.3 18.1 1.4e-53 182.1 18.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|300709541|ref|YP_003735355.1| - 2.2e-10 40.3 14.5 4.1e-10 39.4 14.5 1.4 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_4 PF12730.7 gi|300709541|ref|YP_003735355.1| - 5.6e-10 39.5 8.6 5.6e-10 39.5 8.6 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|300709541|ref|YP_003735355.1| - 3.8e-06 26.3 14.8 3.8e-06 26.3 14.8 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|300709541|ref|YP_003735355.1| - 2.2e-05 24.1 6.4 2.2e-05 24.1 6.4 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein DUF1980 PF09323.10 gi|300709541|ref|YP_003735355.1| - 0.025 14.5 2.2 0.52 10.2 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) DUF2663 PF10864.8 gi|300709541|ref|YP_003735355.1| - 0.24 11.8 1.4 0.83 10.1 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2663) DUF5353 PF17304.2 gi|300709541|ref|YP_003735355.1| - 0.37 10.6 4.0 17 5.3 0.6 3.1 2 1 0 2 2 2 0 Family of unknown function (DUF5353) DNA_ligase_aden PF01653.18 gi|300709542|ref|YP_003735356.1| - 9.5e-106 353.5 0.0 1.6e-105 352.8 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DNA_ligase_OB PF03120.16 gi|300709542|ref|YP_003735356.1| - 9.6e-30 102.3 1.2 1.9e-29 101.4 1.2 1.5 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain HHH_2 PF12826.7 gi|300709542|ref|YP_003735356.1| - 4.6e-23 81.1 1.8 4.7e-22 77.8 0.1 3.2 4 0 0 4 4 4 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|300709542|ref|YP_003735356.1| - 4.8e-15 55.9 0.7 2.4e-06 28.0 0.2 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain BRCT PF00533.26 gi|300709542|ref|YP_003735356.1| - 7.1e-12 45.5 0.0 1.2e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HHH PF00633.23 gi|300709542|ref|YP_003735356.1| - 4e-08 32.7 2.9 0.00026 20.7 0.0 4.4 5 0 0 5 5 5 2 Helix-hairpin-helix motif DNA_ligase_ZBD PF03119.16 gi|300709542|ref|YP_003735356.1| - 6.2e-06 26.1 2.6 6.2e-06 26.1 2.6 2.4 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain GAGA PF09237.11 gi|300709542|ref|YP_003735356.1| - 0.023 14.5 0.0 0.054 13.3 0.0 1.5 1 0 0 1 1 1 0 GAGA factor 5_3_exonuc PF01367.20 gi|300709542|ref|YP_003735356.1| - 0.026 15.1 0.0 0.91 10.2 0.0 2.7 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold RNA_pol_A_CTD PF03118.15 gi|300709542|ref|YP_003735356.1| - 0.03 14.1 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain FAD_binding_3 PF01494.19 gi|300709543|ref|YP_003735357.1| - 1.2e-14 54.4 6.8 5.8e-07 29.1 0.1 3.0 2 1 0 2 2 2 2 FAD binding domain Amino_oxidase PF01593.24 gi|300709543|ref|YP_003735357.1| - 0.00057 19.3 2.5 0.041 13.2 1.0 3.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 gi|300709543|ref|YP_003735357.1| - 0.005 16.1 0.2 14 4.8 0.0 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300709543|ref|YP_003735357.1| - 0.047 12.4 0.2 3.1 6.4 0.4 2.1 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox PF00070.27 gi|300709543|ref|YP_003735357.1| - 0.078 13.5 0.1 0.16 12.6 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Peptidase_S9 PF00326.21 gi|300709543|ref|YP_003735357.1| - 0.1 12.1 0.1 0.17 11.3 0.1 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Mn_catalase PF05067.12 gi|300709544|ref|YP_003735358.1| - 2.1e-75 253.3 0.0 2.5e-75 253.1 0.0 1.0 1 0 0 1 1 1 1 Manganese containing catalase Ferritin PF00210.24 gi|300709544|ref|YP_003735358.1| - 0.04 13.9 0.4 0.16 11.9 0.1 2.0 2 0 0 2 2 2 0 Ferritin-like domain Aminotran_5 PF00266.19 gi|300709545|ref|YP_003735359.1| - 1.5e-31 109.7 0.0 2e-31 109.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V IU_nuc_hydro PF01156.19 gi|300709548|ref|YP_003735362.1| - 2.1e-71 241.0 0.0 2.3e-71 240.8 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase MR_MLE_C PF13378.6 gi|300709549|ref|YP_003735363.1| - 2.1e-42 145.2 0.1 2.7e-42 144.8 0.1 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300709549|ref|YP_003735363.1| - 1.4e-11 44.6 0.0 2.3e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Beta-lactamase PF00144.24 gi|300709551|ref|YP_003735365.1| - 2.6e-60 204.4 1.8 4.5e-60 203.6 1.8 1.3 1 0 0 1 1 1 1 Beta-lactamase TAT_signal PF10518.9 gi|300709551|ref|YP_003735365.1| - 8.1e-05 22.3 7.0 8.1e-05 22.3 7.0 4.3 4 0 0 4 4 4 1 TAT (twin-arginine translocation) pathway signal sequence Beta-lactamase2 PF13354.6 gi|300709551|ref|YP_003735365.1| - 0.14 11.8 0.0 6.9 6.2 0.0 2.2 2 0 0 2 2 2 0 Beta-lactamase enzyme family MFS_1 PF07690.16 gi|300709552|ref|YP_003735366.1| - 6.1e-34 117.5 60.2 5.7e-24 84.7 25.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Cys_Met_Meta_PP PF01053.20 gi|300709553|ref|YP_003735367.1| - 5.8e-131 436.5 0.0 6.6e-131 436.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|300709553|ref|YP_003735367.1| - 1.1e-09 38.0 0.0 1.5e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|300709553|ref|YP_003735367.1| - 1.7e-07 30.9 0.2 1.3e-06 28.0 0.2 1.9 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|300709553|ref|YP_003735367.1| - 4.1e-06 26.3 0.0 1e-05 25.0 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|300709553|ref|YP_003735367.1| - 0.00017 20.7 0.0 0.00027 20.0 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V SepSecS PF05889.13 gi|300709553|ref|YP_003735367.1| - 0.021 13.5 0.0 0.029 13.0 0.0 1.1 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS TPP_enzyme_N PF02776.18 gi|300709553|ref|YP_003735367.1| - 0.076 12.6 0.2 2.3 7.8 0.0 2.5 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Abhydrolase_1 PF00561.20 gi|300709554|ref|YP_003735368.1| - 7.4e-31 107.7 0.2 8.9e-31 107.5 0.2 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|300709554|ref|YP_003735368.1| - 0.0052 16.1 0.0 0.0081 15.5 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 gi|300709554|ref|YP_003735368.1| - 0.013 15.1 0.0 0.034 13.8 0.0 1.6 2 0 0 2 2 2 0 Putative esterase DUF4535 PF15054.6 gi|300709555|ref|YP_003735369.1| - 0.18 11.6 0.5 0.24 11.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4535) HAD PF12710.7 gi|300709556|ref|YP_003735370.1| - 5.9e-26 92.0 0.3 7.1e-26 91.8 0.3 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300709556|ref|YP_003735370.1| - 2.7e-16 60.5 6.8 4.7e-14 53.2 6.8 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|300709556|ref|YP_003735370.1| - 1.7e-09 37.8 0.0 1.6e-07 31.3 0.0 2.7 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|300709556|ref|YP_003735370.1| - 2.7e-06 27.6 0.0 0.00076 19.6 0.0 2.7 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|300709556|ref|YP_003735370.1| - 0.0058 16.1 0.0 0.11 11.8 0.0 2.0 2 0 0 2 2 2 1 Putative Phosphatase DUF4392 PF14336.6 gi|300709556|ref|YP_003735370.1| - 0.076 12.4 0.1 6.8 6.0 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4392) HXXSHH PF07586.11 gi|300709556|ref|YP_003735370.1| - 0.18 11.4 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) S6PP PF05116.13 gi|300709556|ref|YP_003735370.1| - 0.23 11.0 0.0 0.47 9.9 0.0 1.5 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase SUZ PF12752.7 gi|300709556|ref|YP_003735370.1| - 0.32 11.8 1.0 0.54 11.0 1.0 1.4 1 0 0 1 1 1 0 SUZ domain Methyltransf_25 PF13649.6 gi|300709557|ref|YP_003735371.1| - 0.052 14.3 0.0 0.077 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain 2-Hacid_dh_C PF02826.19 gi|300709559|ref|YP_003735373.1| - 1.4e-58 197.2 0.0 2.5e-58 196.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300709559|ref|YP_003735373.1| - 1.2e-35 122.1 0.4 2.6e-35 121.0 0.4 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|300709559|ref|YP_003735373.1| - 7.2e-06 25.7 0.0 3.2e-05 23.6 0.0 2.3 1 0 0 1 1 1 1 ACT domain NAD_binding_2 PF03446.15 gi|300709559|ref|YP_003735373.1| - 0.00057 20.1 1.1 0.025 14.8 0.0 3.1 4 0 0 4 4 4 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|300709559|ref|YP_003735373.1| - 0.0014 18.2 0.0 0.0038 16.8 0.0 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain UDPG_MGDP_dh_C PF03720.15 gi|300709559|ref|YP_003735373.1| - 0.0072 16.7 0.0 0.026 14.9 0.0 1.9 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_7 PF13241.6 gi|300709559|ref|YP_003735373.1| - 0.013 16.0 0.0 0.037 14.5 0.0 1.8 2 0 0 2 2 2 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|300709559|ref|YP_003735373.1| - 0.032 14.5 1.5 0.13 12.5 0.0 2.8 3 0 0 3 3 3 0 TrkA-N domain ChitinaseA_N PF08329.10 gi|300709560|ref|YP_003735374.1| - 0.006 16.2 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 Chitinase A, N-terminal domain CE2_N PF17996.1 gi|300709560|ref|YP_003735374.1| - 0.065 13.2 0.0 0.067 13.2 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate esterase 2 N-terminal PALP PF00291.25 gi|300709561|ref|YP_003735375.1| - 1.9e-72 244.2 7.2 2.2e-72 243.9 7.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF1440 PF07274.12 gi|300709563|ref|YP_003735377.1| - 0.031 14.6 7.2 0.025 14.9 5.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1440) DUF726 PF05277.12 gi|300709563|ref|YP_003735377.1| - 0.83 8.5 11.4 1.1 8.1 11.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF726) OTCace_N PF02729.21 gi|300709564|ref|YP_003735378.1| - 8e-55 184.9 0.0 1.2e-54 184.4 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|300709564|ref|YP_003735378.1| - 4.4e-51 173.1 0.0 6e-51 172.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Peptidase_M20 PF01546.28 gi|300709565|ref|YP_003735379.1| - 1.4e-21 77.2 0.1 1.9e-21 76.7 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|300709565|ref|YP_003735379.1| - 0.0067 16.3 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Aminotran_3 PF00202.21 gi|300709566|ref|YP_003735380.1| - 1.9e-113 379.2 0.0 2.4e-113 378.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III E1-N PF14463.6 gi|300709566|ref|YP_003735380.1| - 0.35 10.7 3.6 8.5 6.2 0.4 2.5 2 0 0 2 2 2 0 E1 N-terminal domain AA_kinase PF00696.28 gi|300709567|ref|YP_003735381.1| - 1.4e-38 132.8 4.4 1.6e-38 132.7 4.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family DUF3280 PF11684.8 gi|300709567|ref|YP_003735381.1| - 0.0069 16.8 0.2 0.02 15.3 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2380) Semialdhyde_dh PF01118.24 gi|300709568|ref|YP_003735382.1| - 1e-24 87.3 0.0 1.9e-24 86.4 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|300709568|ref|YP_003735382.1| - 4.9e-07 30.0 0.0 1e-06 29.0 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain RimK PF08443.11 gi|300709569|ref|YP_003735383.1| - 7.8e-24 84.3 0.0 1e-23 84.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|300709569|ref|YP_003735383.1| - 1.4e-09 38.2 0.0 2.3e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|300709569|ref|YP_003735383.1| - 1.1e-07 31.4 0.0 2.1e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp PF02222.22 gi|300709569|ref|YP_003735383.1| - 6.5e-05 22.6 0.1 0.0008 19.0 0.0 2.4 2 1 0 2 2 2 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|300709569|ref|YP_003735383.1| - 0.00017 21.2 0.0 0.00033 20.2 0.0 1.5 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_5 PF13549.6 gi|300709569|ref|YP_003735383.1| - 0.00041 19.9 0.0 0.0018 17.7 0.0 2.1 1 1 1 2 2 2 1 ATP-grasp domain ThiF PF00899.21 gi|300709569|ref|YP_003735383.1| - 0.00066 19.1 0.0 0.0008 18.8 0.0 1.3 1 0 0 1 1 1 1 ThiF family ATPgrasp_ST PF14397.6 gi|300709569|ref|YP_003735383.1| - 0.00076 18.8 0.0 0.11 11.8 0.0 2.6 2 1 0 2 2 2 2 Sugar-transfer associated ATP-grasp Lyase_1 PF00206.20 gi|300709571|ref|YP_003735385.1| - 1.3e-56 192.2 0.7 8.4e-56 189.6 0.0 2.0 2 0 0 2 2 2 1 Lyase ASL_C2 PF14698.6 gi|300709571|ref|YP_003735385.1| - 1.9e-14 54.1 2.2 1.9e-14 54.1 2.2 3.0 3 0 0 3 3 3 1 Argininosuccinate lyase C-terminal Phage_fiber_2 PF03406.13 gi|300709571|ref|YP_003735385.1| - 0.46 10.1 2.9 0.66 9.6 0.1 2.6 2 0 0 2 2 2 0 Phage tail fibre repeat Arginosuc_synth PF00764.19 gi|300709572|ref|YP_003735386.1| - 1.2e-147 492.3 0.0 1.4e-147 492.1 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|300709572|ref|YP_003735386.1| - 7.8e-06 25.5 0.0 1.4e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|300709572|ref|YP_003735386.1| - 0.00044 19.4 0.0 0.00064 18.9 0.0 1.2 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|300709572|ref|YP_003735386.1| - 0.001 17.9 0.0 0.0016 17.3 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|300709572|ref|YP_003735386.1| - 0.0099 15.6 0.0 0.023 14.4 0.0 1.5 2 0 0 2 2 2 1 Asparagine synthase 2_5_RNA_ligase2 PF13563.6 gi|300709573|ref|YP_003735387.1| - 4.3e-16 59.2 0.0 5.1e-16 58.9 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.16 gi|300709573|ref|YP_003735387.1| - 6.1e-09 36.0 0.1 0.00041 20.5 0.0 2.3 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.9 gi|300709573|ref|YP_003735387.1| - 0.00013 21.9 0.0 0.00016 21.6 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Helicase_C_2 PF13307.6 gi|300709574|ref|YP_003735388.1| - 4.6e-27 95.3 0.0 2.1e-26 93.1 0.0 2.1 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|300709574|ref|YP_003735388.1| - 5.7e-21 74.9 0.7 1.1e-20 74.0 0.7 1.5 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 gi|300709574|ref|YP_003735388.1| - 3.3e-10 40.0 0.6 1.9e-07 31.0 0.1 2.9 2 1 1 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|300709574|ref|YP_003735388.1| - 5.1e-07 29.8 0.6 6.2e-05 23.1 0.6 2.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit HBB PF06777.11 gi|300709574|ref|YP_003735388.1| - 0.00039 20.2 0.0 0.0015 18.2 0.0 2.0 2 0 0 2 2 2 1 Helical and beta-bridge domain ATPase PF06745.13 gi|300709574|ref|YP_003735388.1| - 0.00064 19.1 0.0 0.0011 18.4 0.0 1.4 1 0 0 1 1 1 1 KaiC Zot PF05707.12 gi|300709574|ref|YP_003735388.1| - 0.0039 16.9 0.2 0.59 9.7 0.0 2.4 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) DUF2075 PF09848.9 gi|300709574|ref|YP_003735388.1| - 0.017 14.4 0.1 1.3 8.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_34 PF13872.6 gi|300709574|ref|YP_003735388.1| - 0.032 13.1 0.1 0.13 11.1 0.0 1.9 2 0 0 2 2 2 0 P-loop containing NTP hydrolase pore-1 PhoH PF02562.16 gi|300709574|ref|YP_003735388.1| - 0.056 12.9 0.2 0.12 11.8 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein Asparaginase_C PF17763.1 gi|300709574|ref|YP_003735388.1| - 0.11 12.7 0.1 0.24 11.6 0.1 1.5 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain AAA_16 PF13191.6 gi|300709574|ref|YP_003735388.1| - 1.3 9.4 8.1 1.5 9.2 3.3 2.9 2 1 0 2 2 2 0 AAA ATPase domain Cation_efflux PF01545.21 gi|300709575|ref|YP_003735389.1| - 2.9e-31 108.8 4.6 4.3e-31 108.2 4.6 1.3 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|300709575|ref|YP_003735389.1| - 0.00038 20.5 0.0 0.0006 19.9 0.0 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Metallophos_2 PF12850.7 gi|300709576|ref|YP_003735390.1| - 5.1e-26 91.8 0.7 5.8e-26 91.6 0.7 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|300709576|ref|YP_003735390.1| - 0.00031 21.3 0.1 0.17 12.4 0.0 2.2 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Usp PF00582.26 gi|300709576|ref|YP_003735390.1| - 0.042 14.4 0.7 0.057 13.9 0.7 1.2 1 0 0 1 1 1 0 Universal stress protein family DUF4083 PF13314.6 gi|300709577|ref|YP_003735391.1| - 0.023 14.6 0.8 0.028 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) EssA PF10661.9 gi|300709577|ref|YP_003735391.1| - 0.22 11.4 0.3 0.24 11.3 0.3 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Beta_elim_lyase PF01212.21 gi|300709578|ref|YP_003735392.1| - 2e-91 306.3 0.2 2.3e-91 306.1 0.2 1.0 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|300709578|ref|YP_003735392.1| - 0.0015 17.9 0.0 0.0026 17.2 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|300709578|ref|YP_003735392.1| - 0.0028 16.3 0.0 0.004 15.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_3 PF00202.21 gi|300709578|ref|YP_003735392.1| - 0.055 12.1 0.0 0.18 10.4 0.0 1.7 2 0 0 2 2 2 0 Aminotransferase class-III ABA_WDS PF02496.16 gi|300709578|ref|YP_003735392.1| - 0.088 13.3 0.6 2.5 8.6 0.1 2.5 2 0 0 2 2 2 0 ABA/WDS induced protein Na_sulph_symp PF00939.19 gi|300709579|ref|YP_003735393.1| - 6e-22 78.3 22.0 8.9e-22 77.8 22.0 1.2 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 gi|300709579|ref|YP_003735393.1| - 3e-17 62.8 26.9 3e-17 62.8 26.9 2.0 1 1 1 2 2 2 1 Citrate transporter Peptidase_M29 PF02073.15 gi|300709580|ref|YP_003735394.1| - 1.1e-65 222.0 0.0 1.3e-65 221.8 0.0 1.1 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) Fibrillarin_2 PF10113.9 gi|300709580|ref|YP_003735394.1| - 0.064 11.9 0.1 0.093 11.3 0.1 1.2 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein YdjM PF04307.14 gi|300709581|ref|YP_003735395.1| - 0.00039 19.8 6.1 0.0076 15.6 6.1 2.1 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase CarS-like PF01864.17 gi|300709582|ref|YP_003735396.1| - 1.7e-46 158.4 3.0 1.9e-46 158.2 3.0 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|300709582|ref|YP_003735396.1| - 1.9e-05 24.6 3.0 1.9e-05 24.6 3.0 2.2 1 1 1 2 2 2 1 Cytidylyltransferase family Rick_17kDa_Anti PF05433.15 gi|300709582|ref|YP_003735396.1| - 5.2 7.0 10.7 51 3.8 7.8 3.0 2 1 0 2 2 2 0 Glycine zipper 2TM domain Pro_dh PF01619.18 gi|300709583|ref|YP_003735397.1| - 5.2e-23 82.0 0.0 8.9e-23 81.3 0.0 1.4 1 1 0 1 1 1 1 Proline dehydrogenase DUF502 PF04367.13 gi|300709584|ref|YP_003735398.1| - 1.8e-17 63.2 2.0 1.9e-16 59.9 0.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF502) ATPase_gene1 PF09527.10 gi|300709584|ref|YP_003735398.1| - 4.9 7.4 8.2 3.7 7.8 1.3 2.3 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Asn_synthase PF00733.21 gi|300709585|ref|YP_003735399.1| - 8e-10 38.9 0.3 7e-09 35.8 0.2 2.0 2 0 0 2 2 2 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|300709585|ref|YP_003735399.1| - 5.9e-08 31.9 0.0 4e-05 22.6 0.0 2.3 2 0 0 2 2 2 2 tRNA methyl transferase NAD_synthase PF02540.17 gi|300709585|ref|YP_003735399.1| - 1.7e-07 30.7 0.0 2.8e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|300709585|ref|YP_003735399.1| - 0.00019 21.0 0.0 0.00038 20.0 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC QueH PF02677.14 gi|300709585|ref|YP_003735399.1| - 0.015 15.4 0.0 0.027 14.6 0.0 1.4 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH Arginosuc_synth PF00764.19 gi|300709585|ref|YP_003735399.1| - 0.071 12.4 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Arginosuccinate synthase ATP_bind_3 PF01171.20 gi|300709585|ref|YP_003735399.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 PP-loop family MutS_V PF00488.21 gi|300709586|ref|YP_003735400.1| - 1.6e-06 28.3 0.1 2.5e-06 27.6 0.1 1.3 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.6 gi|300709586|ref|YP_003735400.1| - 2.3e-05 24.9 3.9 3e-05 24.5 0.8 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|300709586|ref|YP_003735400.1| - 0.00065 19.5 0.9 0.058 13.3 0.0 2.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif Transposase_20 PF02371.16 gi|300709586|ref|YP_003735400.1| - 0.005 17.1 0.1 0.013 15.8 0.1 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family AAA_21 PF13304.6 gi|300709586|ref|YP_003735400.1| - 0.3 10.8 0.8 4.5 7.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system YqhR PF11085.8 gi|300709587|ref|YP_003735401.1| - 0.025 14.5 0.5 0.028 14.3 0.5 1.0 1 0 0 1 1 1 0 Conserved membrane protein YqhR Leu_Phe_trans PF03588.14 gi|300709587|ref|YP_003735401.1| - 0.1 12.1 0.8 0.12 11.9 0.8 1.1 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase AAA_16 PF13191.6 gi|300709588|ref|YP_003735402.1| - 4.3e-12 46.7 0.3 3e-10 40.7 0.3 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|300709588|ref|YP_003735402.1| - 2.5e-09 37.5 0.0 5e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Cdc6_C PF09079.11 gi|300709588|ref|YP_003735402.1| - 1.6e-06 28.0 0.2 5.9e-06 26.2 0.0 2.1 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA PF00004.29 gi|300709588|ref|YP_003735402.1| - 9.5e-05 22.8 0.0 0.00019 21.9 0.0 1.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|300709588|ref|YP_003735402.1| - 0.00018 21.4 0.0 0.00028 20.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|300709588|ref|YP_003735402.1| - 0.0014 18.4 0.2 0.0037 17.0 0.1 1.8 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|300709588|ref|YP_003735402.1| - 0.0019 18.1 0.0 0.0038 17.1 0.0 1.5 1 0 0 1 1 1 1 NACHT domain TIP49_C PF17856.1 gi|300709588|ref|YP_003735402.1| - 0.0021 18.1 0.0 0.0052 16.9 0.0 1.6 1 0 0 1 1 1 1 TIP49 AAA-lid domain T2SSE PF00437.20 gi|300709588|ref|YP_003735402.1| - 0.0039 16.3 0.1 0.054 12.6 0.2 2.3 1 1 1 2 2 2 1 Type II/IV secretion system protein AAA_6 PF12774.7 gi|300709588|ref|YP_003735402.1| - 0.0047 15.9 0.0 0.008 15.2 0.0 1.3 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_7 PF12775.7 gi|300709588|ref|YP_003735402.1| - 0.0072 15.8 0.0 0.057 12.9 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_5 PF07728.14 gi|300709588|ref|YP_003735402.1| - 0.013 15.5 0.0 0.042 13.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|300709588|ref|YP_003735402.1| - 0.016 15.1 0.1 0.043 13.7 0.0 1.7 2 0 0 2 2 1 0 NTPase AAA_33 PF13671.6 gi|300709588|ref|YP_003735402.1| - 0.018 15.2 0.1 0.043 14.0 0.1 1.9 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|300709588|ref|YP_003735402.1| - 0.021 14.6 0.6 0.42 10.3 0.6 2.3 1 1 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|300709588|ref|YP_003735402.1| - 0.023 14.0 0.1 0.049 12.9 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_35 PF14516.6 gi|300709588|ref|YP_003735402.1| - 0.026 13.4 0.0 0.067 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain AAA_19 PF13245.6 gi|300709588|ref|YP_003735402.1| - 0.044 14.1 0.0 0.082 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|300709588|ref|YP_003735402.1| - 0.046 14.1 0.0 0.085 13.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Zeta_toxin PF06414.12 gi|300709588|ref|YP_003735402.1| - 0.072 12.4 0.0 0.18 11.0 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin CbiA PF01656.23 gi|300709588|ref|YP_003735402.1| - 0.075 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Viral_helicase1 PF01443.18 gi|300709588|ref|YP_003735402.1| - 0.079 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Sigma54_activat PF00158.26 gi|300709588|ref|YP_003735402.1| - 0.082 12.6 0.0 0.12 12.1 0.0 1.4 1 1 0 1 1 1 0 Sigma-54 interaction domain Rad17 PF03215.15 gi|300709588|ref|YP_003735402.1| - 0.098 12.6 0.0 0.3 11.0 0.0 1.7 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_18 PF13238.6 gi|300709588|ref|YP_003735402.1| - 0.11 13.0 0.0 0.21 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.6 gi|300709588|ref|YP_003735402.1| - 0.15 10.8 0.0 7.7 5.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain DUF326 PF03860.16 gi|300709589|ref|YP_003735403.1| - 1.8e-07 30.9 48.3 0.0019 18.1 8.5 4.9 4 1 1 5 5 5 4 Domain of Unknown Function (DUF326) Rib_5-P_isom_A PF06026.14 gi|300709590|ref|YP_003735404.1| - 3.1e-58 196.2 0.0 3.8e-58 195.9 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|300709590|ref|YP_003735404.1| - 1e-06 28.8 0.0 2.2e-05 24.4 0.0 2.1 2 0 0 2 2 2 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 gi|300709590|ref|YP_003735404.1| - 0.082 12.0 0.0 0.17 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative sugar-binding domain CBFD_NFYB_HMF PF00808.23 gi|300709591|ref|YP_003735405.1| - 0.00061 20.0 0.0 0.0009 19.5 0.0 1.4 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF1931 PF09123.11 gi|300709591|ref|YP_003735405.1| - 0.00065 19.8 0.5 0.00068 19.8 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) Histone PF00125.24 gi|300709591|ref|YP_003735405.1| - 0.021 15.2 0.0 0.022 15.1 0.0 1.1 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 DctP PF03480.13 gi|300709591|ref|YP_003735405.1| - 0.033 13.5 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 AIRC PF00731.20 gi|300709592|ref|YP_003735406.1| - 3.3e-13 49.4 4.2 3.3e-13 49.4 4.2 2.0 2 1 0 2 2 2 1 AIR carboxylase Glycos_trans_3N PF02885.17 gi|300709592|ref|YP_003735406.1| - 0.04 13.8 1.9 6.1 6.8 0.7 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain ATPase-cat_bd PF12156.8 gi|300709593|ref|YP_003735407.1| - 0.019 15.7 1.3 0.02 15.6 1.3 1.1 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DUF3268 PF11672.8 gi|300709593|ref|YP_003735407.1| - 0.069 13.5 0.1 0.08 13.3 0.1 1.2 1 0 0 1 1 1 0 zinc-finger-containing domain zinc_ribbon_4 PF13717.6 gi|300709593|ref|YP_003735407.1| - 0.28 11.1 3.3 0.65 10.0 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_7 PF02591.15 gi|300709593|ref|YP_003735407.1| - 0.55 10.5 4.7 1.6 9.0 0.1 2.4 3 0 0 3 3 3 0 C4-type zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|300709593|ref|YP_003735407.1| - 0.59 10.3 4.3 2 8.6 4.0 1.8 1 1 0 1 1 1 0 Zinc ribbon domain GIY-YIG PF01541.24 gi|300709594|ref|YP_003735408.1| - 2.2e-18 66.3 0.0 2.4e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 GIY-YIG catalytic domain T5orf172 PF10544.9 gi|300709594|ref|YP_003735408.1| - 0.0045 17.5 0.1 0.0056 17.2 0.1 1.1 1 0 0 1 1 1 1 T5orf172 domain FMN_red PF03358.15 gi|300709595|ref|YP_003735409.1| - 7.6e-32 110.2 0.0 9.3e-32 109.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|300709595|ref|YP_003735409.1| - 3.2e-09 36.8 0.0 4.4e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|300709595|ref|YP_003735409.1| - 0.028 14.7 0.0 0.051 13.8 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain PGM_PMM_I PF02878.16 gi|300709596|ref|YP_003735410.1| - 7.8e-36 122.8 0.0 1.4e-35 122.0 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 gi|300709596|ref|YP_003735410.1| - 4.9e-24 84.7 0.0 8.6e-24 83.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 gi|300709596|ref|YP_003735410.1| - 2.4e-23 82.7 0.1 7.8e-23 81.1 0.1 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|300709596|ref|YP_003735410.1| - 8e-14 51.6 0.1 2.8e-13 49.9 0.1 2.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF4333 PF14230.6 gi|300709596|ref|YP_003735410.1| - 0.0069 16.6 0.0 1.9 8.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4333) TENA_THI-4 PF03070.16 gi|300709597|ref|YP_003735411.1| - 3.5e-48 164.2 0.9 4.3e-48 163.9 0.9 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family TENA_THI-4 PF03070.16 gi|300709598|ref|YP_003735412.1| - 6.5e-31 107.8 0.5 7.2e-31 107.6 0.5 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Acetyltransf_7 PF13508.7 gi|300709599|ref|YP_003735413.1| - 1e-09 38.7 0.1 1.5e-09 38.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300709599|ref|YP_003735413.1| - 2.2e-07 30.8 0.0 3.3e-07 30.3 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300709599|ref|YP_003735413.1| - 5.2e-07 29.8 0.1 0.00025 21.1 0.1 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300709599|ref|YP_003735413.1| - 0.00026 21.2 0.3 0.00038 20.7 0.3 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|300709599|ref|YP_003735413.1| - 0.043 13.8 0.3 0.86 9.6 0.3 2.2 1 1 0 1 1 1 0 FR47-like protein PEGA PF08308.11 gi|300709600|ref|YP_003735414.1| - 0.036 14.0 0.0 0.059 13.3 0.0 1.4 1 1 0 1 1 1 0 PEGA domain Rep_fac_C PF08542.11 gi|300709601|ref|YP_003735415.1| - 1.3e-23 83.2 0.0 2.4e-23 82.4 0.0 1.5 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|300709601|ref|YP_003735415.1| - 9.3e-18 64.9 0.0 7.8e-16 58.7 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|300709601|ref|YP_003735415.1| - 9.2e-16 58.0 0.0 1.4e-11 44.4 0.0 2.2 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA_16 PF13191.6 gi|300709601|ref|YP_003735415.1| - 3.4e-07 30.8 0.2 0.00012 22.5 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 gi|300709601|ref|YP_003735415.1| - 1.9e-06 27.7 0.0 8.7e-05 22.3 0.0 2.7 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_assoc_2 PF16193.5 gi|300709601|ref|YP_003735415.1| - 4.4e-05 23.7 0.6 0.0001 22.6 0.1 1.9 2 0 0 2 2 1 1 AAA C-terminal domain AAA_14 PF13173.6 gi|300709601|ref|YP_003735415.1| - 0.00041 20.4 0.0 0.00069 19.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|300709601|ref|YP_003735415.1| - 0.0017 18.3 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain DNA_pol3_delta PF06144.13 gi|300709601|ref|YP_003735415.1| - 0.0023 17.7 0.0 0.0037 17.1 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit ResIII PF04851.15 gi|300709601|ref|YP_003735415.1| - 0.0027 17.7 0.0 0.017 15.2 0.0 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_3 PF07726.11 gi|300709601|ref|YP_003735415.1| - 0.003 17.4 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|300709601|ref|YP_003735415.1| - 0.0039 17.5 0.1 2.7 8.3 0.0 2.6 2 1 1 3 3 3 1 AAA domain Sigma54_activat PF00158.26 gi|300709601|ref|YP_003735415.1| - 0.005 16.6 0.0 0.45 10.2 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 gi|300709601|ref|YP_003735415.1| - 0.0063 16.6 0.0 0.015 15.4 0.0 1.6 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|300709601|ref|YP_003735415.1| - 0.007 15.8 0.0 1.2 8.5 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|300709601|ref|YP_003735415.1| - 0.014 15.2 0.0 0.046 13.5 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|300709601|ref|YP_003735415.1| - 0.016 14.9 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3400 PF11880.8 gi|300709601|ref|YP_003735415.1| - 0.047 13.2 0.0 0.15 11.6 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) RNA_helicase PF00910.22 gi|300709601|ref|YP_003735415.1| - 0.075 13.4 0.0 0.17 12.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase AAA_5 PF07728.14 gi|300709601|ref|YP_003735415.1| - 0.08 12.9 0.0 0.31 11.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) ArsA_ATPase PF02374.15 gi|300709601|ref|YP_003735415.1| - 0.15 11.3 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 Anion-transporting ATPase NB-ARC PF00931.22 gi|300709601|ref|YP_003735415.1| - 0.17 11.1 0.0 0.28 10.3 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_7 PF12775.7 gi|300709601|ref|YP_003735415.1| - 0.17 11.3 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region DEAD PF00270.29 gi|300709601|ref|YP_003735415.1| - 0.22 11.3 0.4 5.5 6.7 0.0 2.5 2 1 1 3 3 3 0 DEAD/DEAH box helicase Acylphosphatase PF00708.18 gi|300709602|ref|YP_003735416.1| - 1.2e-24 86.5 0.1 1.3e-24 86.4 0.1 1.0 1 0 0 1 1 1 1 Acylphosphatase Flu_M1 PF00598.19 gi|300709602|ref|YP_003735416.1| - 0.025 14.1 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M1) BLUF PF04940.12 gi|300709602|ref|YP_003735416.1| - 0.14 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Sensors of blue-light using FAD DUF4191 PF13829.6 gi|300709604|ref|YP_003735418.1| - 0.14 11.4 7.2 0.25 10.7 7.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1230 PF06799.11 gi|300709604|ref|YP_003735418.1| - 1.9 8.6 4.8 2.8 8.0 0.5 2.0 1 1 1 2 2 2 0 Conserved in the green lineage and diatoms 27 DUF3040 PF11239.8 gi|300709604|ref|YP_003735418.1| - 2.5 8.4 13.1 0.068 13.5 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Metal_resist PF13801.6 gi|300709605|ref|YP_003735419.1| - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Heavy-metal resistance tRNA-synt_2c PF01411.19 gi|300709606|ref|YP_003735420.1| - 7.2e-123 411.0 0.0 8.9e-123 410.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|300709606|ref|YP_003735420.1| - 1.3e-17 64.5 2.6 3.7e-17 63.0 2.6 1.8 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 gi|300709606|ref|YP_003735420.1| - 6.2e-13 48.6 0.8 1.6e-12 47.3 0.8 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Abhydrolase_1 PF00561.20 gi|300709607|ref|YP_003735421.1| - 1e-16 61.4 0.1 2.5e-09 37.1 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300709607|ref|YP_003735421.1| - 2.6e-15 57.6 13.1 3.3e-15 57.3 13.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300709607|ref|YP_003735421.1| - 1.6e-11 44.0 0.1 1.4e-10 40.9 0.1 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|300709607|ref|YP_003735421.1| - 1.4e-06 28.4 0.0 2.1e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Peptidase_S9 PF00326.21 gi|300709607|ref|YP_003735421.1| - 0.012 15.1 0.2 0.033 13.7 0.0 1.8 3 0 0 3 3 3 0 Prolyl oligopeptidase family UPF0227 PF05728.12 gi|300709607|ref|YP_003735421.1| - 0.021 14.8 0.2 0.33 10.9 0.0 2.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0227) Beta-lactamase PF00144.24 gi|300709608|ref|YP_003735422.1| - 3.8e-68 230.2 4.8 4.3e-68 230.0 4.8 1.0 1 0 0 1 1 1 1 Beta-lactamase GATase PF00117.28 gi|300709609|ref|YP_003735423.1| - 5.2e-21 75.3 0.0 6.3e-21 75.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|300709609|ref|YP_003735423.1| - 5.8e-08 32.8 0.1 4.1e-07 30.0 0.1 2.1 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|300709609|ref|YP_003735423.1| - 0.072 12.7 0.0 0.095 12.3 0.0 1.4 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Acyl-CoA_dh_1 PF00441.24 gi|300709610|ref|YP_003735424.1| - 3.2e-34 118.3 1.6 4.5e-34 117.8 1.6 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300709610|ref|YP_003735424.1| - 1.3e-25 90.3 0.7 2.2e-25 89.5 0.1 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300709610|ref|YP_003735424.1| - 7.1e-22 77.4 0.0 1.4e-21 76.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|300709610|ref|YP_003735424.1| - 2.4e-10 40.8 1.1 4e-10 40.1 1.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DUF393 PF04134.12 gi|300709612|ref|YP_003735426.1| - 1.6e-14 55.2 0.1 1.8e-14 55.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF393 Fer4 PF00037.27 gi|300709613|ref|YP_003735427.1| - 1.2e-10 40.7 14.3 6.6e-07 28.9 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|300709613|ref|YP_003735427.1| - 6.6e-10 39.4 2.0 6.8e-05 23.4 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300709613|ref|YP_003735427.1| - 2.2e-08 34.1 3.8 3.5e-08 33.5 3.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300709613|ref|YP_003735427.1| - 7.5e-07 29.2 18.2 5.4e-05 23.2 7.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300709613|ref|YP_003735427.1| - 3.9e-06 27.7 4.5 0.00028 21.8 1.2 2.6 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|300709613|ref|YP_003735427.1| - 6.3e-06 26.6 1.8 0.015 15.7 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|300709613|ref|YP_003735427.1| - 7.5e-06 26.0 10.7 4.7e-05 23.4 10.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300709613|ref|YP_003735427.1| - 1.5e-05 24.9 14.2 5.1e-05 23.2 6.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|300709613|ref|YP_003735427.1| - 1.8e-05 25.2 1.1 0.027 15.0 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|300709613|ref|YP_003735427.1| - 4.1e-05 23.7 3.1 0.00058 20.0 1.5 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300709613|ref|YP_003735427.1| - 0.0002 21.3 11.0 0.003 17.5 3.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300709613|ref|YP_003735427.1| - 0.0011 19.3 2.0 0.0011 19.3 2.0 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain ETF_QO PF05187.13 gi|300709613|ref|YP_003735427.1| - 0.0021 18.2 0.2 0.0023 18.0 0.2 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|300709613|ref|YP_003735427.1| - 0.0021 18.5 13.6 0.0099 16.4 13.6 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|300709613|ref|YP_003735427.1| - 0.0023 18.8 4.1 0.0023 18.8 4.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain PriA_CRR PF18319.1 gi|300709614|ref|YP_003735428.1| - 0.034 14.1 0.9 0.055 13.5 0.9 1.4 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain PyrI_C PF02748.15 gi|300709614|ref|YP_003735428.1| - 0.14 12.1 0.9 0.26 11.2 0.2 1.8 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain YyzF PF14116.6 gi|300709614|ref|YP_003735428.1| - 0.63 10.1 4.0 7.6 6.7 0.3 2.2 2 0 0 2 2 2 0 YyzF-like protein PHP PF02811.19 gi|300709615|ref|YP_003735429.1| - 7e-05 23.2 0.0 7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|300709615|ref|YP_003735429.1| - 0.0071 16.1 0.0 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 PHP-associated FAM176 PF14851.6 gi|300709618|ref|YP_003735432.1| - 0.16 11.6 1.5 0.17 11.6 1.5 1.0 1 0 0 1 1 1 0 FAM176 family NAD_binding_10 PF13460.6 gi|300709620|ref|YP_003735434.1| - 3.3e-21 76.0 0.0 5.9e-21 75.2 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 gi|300709620|ref|YP_003735434.1| - 2.9e-13 49.9 0.0 1.6e-12 47.4 0.0 2.0 1 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 gi|300709620|ref|YP_003735434.1| - 5.5e-12 45.7 0.0 1e-11 44.8 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 gi|300709620|ref|YP_003735434.1| - 7.9e-10 38.2 0.0 1.4e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|300709620|ref|YP_003735434.1| - 4.7e-05 22.9 0.0 6.9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|300709620|ref|YP_003735434.1| - 0.0002 20.6 0.0 0.00034 19.9 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein PAC2 PF09754.9 gi|300709620|ref|YP_003735434.1| - 0.0015 18.6 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 PAC2 family RmlD_sub_bind PF04321.17 gi|300709620|ref|YP_003735434.1| - 0.0091 15.1 0.0 0.026 13.6 0.0 1.7 2 0 0 2 2 2 1 RmlD substrate binding domain CxxCxxCC PF03692.15 gi|300709621|ref|YP_003735435.1| - 0.00029 21.5 1.5 0.06 14.0 0.0 2.3 2 0 0 2 2 2 2 Putative zinc- or iron-chelating domain DUF4880 PF16220.5 gi|300709621|ref|YP_003735435.1| - 0.003 17.4 0.7 0.0084 16.0 0.7 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4880) Pribosyltran PF00156.27 gi|300709622|ref|YP_003735436.1| - 2.2e-24 85.8 0.3 2.2e-13 50.0 0.0 2.0 1 1 1 2 2 2 2 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300709622|ref|YP_003735436.1| - 0.0005 19.6 0.1 0.00095 18.7 0.0 1.5 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|300709622|ref|YP_003735436.1| - 0.13 11.7 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase Pox_A_type_inc PF04508.12 gi|300709623|ref|YP_003735437.1| - 0.00046 19.9 0.2 0.00091 19.0 0.2 1.6 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat LytB_WW PF18342.1 gi|300709623|ref|YP_003735437.1| - 0.16 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Endo-beta-N-acetylglucosaminidase LytB WW domain Molybdopterin PF00384.22 gi|300709624|ref|YP_003735438.1| - 2.1e-58 198.3 0.0 2.6e-58 198.0 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|300709624|ref|YP_003735438.1| - 2e-17 63.2 0.0 4.2e-17 62.2 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|300709624|ref|YP_003735438.1| - 3.4e-06 26.9 0.7 7.7e-06 25.8 0.7 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain HTH_29 PF13551.6 gi|300709624|ref|YP_003735438.1| - 0.15 12.1 0.5 5.8 7.0 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn helix MFS_1 PF07690.16 gi|300709625|ref|YP_003735439.1| - 2.9e-28 98.8 49.3 2.9e-28 98.8 49.3 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4716 PF15837.5 gi|300709625|ref|YP_003735439.1| - 0.085 12.9 0.0 0.25 11.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) MFS_1_like PF12832.7 gi|300709625|ref|YP_003735439.1| - 0.95 8.3 20.3 0.36 9.7 0.3 3.8 1 1 2 3 3 3 0 MFS_1 like family NIR_SIR PF01077.22 gi|300709626|ref|YP_003735440.1| - 9.4e-51 171.5 0.0 6e-37 126.6 0.0 2.4 3 0 0 3 3 3 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|300709626|ref|YP_003735440.1| - 7.3e-35 118.6 0.0 1.7e-16 59.8 0.0 3.2 2 1 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain DGC PF08859.11 gi|300709626|ref|YP_003735440.1| - 0.14 12.3 0.2 1.3 9.2 0.0 2.3 2 0 0 2 2 2 0 DGC domain Methyltrn_RNA_2 PF04013.12 gi|300709626|ref|YP_003735440.1| - 0.18 11.5 0.0 0.71 9.5 0.0 1.8 2 0 0 2 2 2 0 Putative SAM-dependent RNA methyltransferase ABC_tran PF00005.27 gi|300709629|ref|YP_003735443.1| - 6.5e-33 114.1 0.0 1.3e-32 113.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|300709629|ref|YP_003735443.1| - 2.3e-16 60.0 0.1 4.8e-16 59.0 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|300709629|ref|YP_003735443.1| - 0.00013 22.3 0.2 0.00089 19.5 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300709629|ref|YP_003735443.1| - 0.0003 21.2 0.0 0.00057 20.3 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|300709629|ref|YP_003735443.1| - 0.00045 19.7 0.0 0.00072 19.1 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ATP-synt_ab PF00006.25 gi|300709629|ref|YP_003735443.1| - 0.0013 18.4 0.0 0.0016 18.1 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain NB-ARC PF00931.22 gi|300709629|ref|YP_003735443.1| - 0.0035 16.6 0.1 0.026 13.7 0.0 2.0 2 0 0 2 2 2 1 NB-ARC domain RsgA_GTPase PF03193.16 gi|300709629|ref|YP_003735443.1| - 0.0066 16.4 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 gi|300709629|ref|YP_003735443.1| - 0.0077 16.2 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|300709629|ref|YP_003735443.1| - 0.01 16.3 0.1 0.024 15.1 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|300709629|ref|YP_003735443.1| - 0.01 15.7 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_29 PF13555.6 gi|300709629|ref|YP_003735443.1| - 0.018 14.8 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Adeno_IVa2 PF02456.15 gi|300709629|ref|YP_003735443.1| - 0.023 13.5 0.0 0.038 12.8 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein RNA_helicase PF00910.22 gi|300709629|ref|YP_003735443.1| - 0.024 15.0 0.0 0.044 14.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|300709629|ref|YP_003735443.1| - 0.032 14.4 0.3 0.12 12.6 0.1 2.2 2 1 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|300709629|ref|YP_003735443.1| - 0.056 12.6 0.0 0.069 12.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Mg_chelatase PF01078.21 gi|300709629|ref|YP_003735443.1| - 0.074 12.4 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PRK PF00485.18 gi|300709629|ref|YP_003735443.1| - 0.076 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Sigma54_activat PF00158.26 gi|300709629|ref|YP_003735443.1| - 0.086 12.5 0.0 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|300709629|ref|YP_003735443.1| - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_25 PF13481.6 gi|300709629|ref|YP_003735443.1| - 0.13 11.9 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|300709629|ref|YP_003735443.1| - 0.14 11.6 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 gi|300709629|ref|YP_003735443.1| - 0.19 11.5 0.2 10 5.8 0.0 2.3 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 gi|300709630|ref|YP_003735444.1| - 3.3e-25 89.2 0.0 6.9e-25 88.1 0.0 1.5 1 1 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|300709630|ref|YP_003735444.1| - 2e-18 66.7 0.3 3.8e-18 65.8 0.3 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|300709630|ref|YP_003735444.1| - 2.9e-05 24.0 0.1 0.00015 21.7 0.0 1.8 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300709630|ref|YP_003735444.1| - 0.15 12.4 0.0 0.45 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.6 gi|300709630|ref|YP_003735444.1| - 0.16 11.5 0.1 1.6 8.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|300709631|ref|YP_003735445.1| - 1.3e-34 119.5 7.7 1.3e-34 119.5 7.7 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|300709631|ref|YP_003735445.1| - 0.0021 18.0 3.8 0.005 16.8 0.1 3.2 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C OmpA_like PF16961.5 gi|300709631|ref|YP_003735445.1| - 0.1 12.2 0.2 0.27 10.9 0.1 1.7 2 0 0 2 2 2 0 Putative OmpA-OmpF-like porin family BPD_transp_1 PF00528.22 gi|300709632|ref|YP_003735446.1| - 5.7e-43 146.8 8.1 5.7e-43 146.8 8.1 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|300709633|ref|YP_003735447.1| - 1.2e-63 215.4 0.4 1.5e-63 215.1 0.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 gi|300709633|ref|YP_003735447.1| - 0.013 15.3 3.2 0.023 14.5 3.2 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Helicase_C_2 PF13307.6 gi|300709635|ref|YP_003735449.1| - 1.1e-20 74.5 0.0 1.6e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain AAA_22 PF13401.6 gi|300709635|ref|YP_003735449.1| - 3.4e-05 24.1 0.0 0.0011 19.2 0.0 2.5 2 1 0 2 2 2 1 AAA domain DEAD_2 PF06733.15 gi|300709635|ref|YP_003735449.1| - 8.3e-05 22.3 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 gi|300709635|ref|YP_003735449.1| - 0.00043 20.1 0.0 0.1 12.3 0.0 2.4 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|300709635|ref|YP_003735449.1| - 0.0015 18.6 0.0 0.06 13.3 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|300709635|ref|YP_003735449.1| - 0.0024 18.3 0.9 0.016 15.6 0.0 2.6 3 0 0 3 3 3 1 AAA ATPase domain AAA_30 PF13604.6 gi|300709635|ref|YP_003735449.1| - 0.0062 16.3 0.4 1.3 8.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|300709635|ref|YP_003735449.1| - 0.09 12.2 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein OrsD PF12013.8 gi|300709635|ref|YP_003735449.1| - 0.12 12.8 0.1 0.26 11.8 0.1 1.5 1 0 0 1 1 1 0 Orsellinic acid/F9775 biosynthesis cluster protein D Met_10 PF02475.16 gi|300709636|ref|YP_003735450.1| - 3.5e-52 177.1 0.0 9.7e-52 175.6 0.0 1.7 2 0 0 2 2 2 1 Met-10+ like-protein Trm5_N PF18093.1 gi|300709636|ref|YP_003735450.1| - 7e-05 22.6 0.1 0.00024 20.9 0.0 1.9 2 0 0 2 2 2 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|300709636|ref|YP_003735450.1| - 8.8e-05 22.1 0.0 0.00011 21.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|300709636|ref|YP_003735450.1| - 9e-05 23.1 0.1 0.00032 21.3 0.1 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300709636|ref|YP_003735450.1| - 0.0019 18.0 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|300709636|ref|YP_003735450.1| - 0.0036 17.0 0.0 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|300709636|ref|YP_003735450.1| - 0.0051 16.4 0.0 0.014 14.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain PrmA PF06325.13 gi|300709636|ref|YP_003735450.1| - 0.011 15.2 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) SAM_MT PF04445.13 gi|300709636|ref|YP_003735450.1| - 0.018 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase RrnaAD PF00398.20 gi|300709636|ref|YP_003735450.1| - 0.026 13.6 0.0 0.034 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 gi|300709636|ref|YP_003735450.1| - 0.049 13.5 0.0 0.32 10.8 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 gi|300709636|ref|YP_003735450.1| - 0.12 11.7 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|300709636|ref|YP_003735450.1| - 0.13 12.9 0.1 0.75 10.5 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain DNA_methylase PF00145.17 gi|300709636|ref|YP_003735450.1| - 0.18 11.1 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase NMD3 PF04981.13 gi|300709637|ref|YP_003735451.1| - 5.7e-64 215.9 0.0 6.9e-64 215.6 0.0 1.1 1 0 0 1 1 1 1 NMD3 family Nudix_N_2 PF14803.6 gi|300709637|ref|YP_003735451.1| - 0.017 15.1 12.3 1.4 8.9 0.1 4.1 4 0 0 4 4 4 0 Nudix N-terminal Rpr2 PF04032.16 gi|300709637|ref|YP_003735451.1| - 0.04 14.2 0.2 0.89 9.9 0.0 2.7 3 0 0 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DZR PF12773.7 gi|300709637|ref|YP_003735451.1| - 0.048 13.7 6.5 0.69 10.0 3.9 3.0 2 1 0 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|300709637|ref|YP_003735451.1| - 0.07 12.9 6.5 0.92 9.3 0.2 3.4 3 0 0 3 3 3 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|300709637|ref|YP_003735451.1| - 0.14 11.9 0.3 0.14 11.9 0.3 3.0 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300709637|ref|YP_003735451.1| - 0.21 11.1 4.6 3 7.4 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain FYVE PF01363.21 gi|300709637|ref|YP_003735451.1| - 0.23 11.6 2.4 10 6.3 1.8 2.6 2 1 0 2 2 2 0 FYVE zinc finger GFA PF04828.14 gi|300709637|ref|YP_003735451.1| - 0.67 10.3 5.0 11 6.4 0.1 3.3 2 1 0 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme Zn-ribbon_8 PF09723.10 gi|300709637|ref|YP_003735451.1| - 1.4 9.1 6.4 24 5.1 0.5 3.3 3 0 0 3 3 3 0 Zinc ribbon domain DUF35_N PF12172.8 gi|300709637|ref|YP_003735451.1| - 6.4 6.8 12.5 2.3 8.2 0.4 3.4 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Polysacc_deac_1 PF01522.21 gi|300709638|ref|YP_003735452.1| - 8e-15 54.8 0.0 1.4e-14 54.1 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300709638|ref|YP_003735452.1| - 8.1e-05 22.4 0.1 0.0002 21.1 0.1 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Peptidase_M48 PF01435.18 gi|300709639|ref|YP_003735453.1| - 4.1e-40 137.7 0.3 6.1e-40 137.1 0.0 1.4 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|300709639|ref|YP_003735453.1| - 1.1e-07 31.4 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|300709639|ref|YP_003735453.1| - 0.089 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 SprT-like family VKOR PF07884.14 gi|300709639|ref|YP_003735453.1| - 0.11 12.7 9.5 0.72 10.1 3.5 2.2 2 0 0 2 2 2 0 Vitamin K epoxide reductase family DUF2207 PF09972.9 gi|300709639|ref|YP_003735453.1| - 4.4 6.0 6.5 2.7 6.7 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) TMEM40 PF15817.5 gi|300709640|ref|YP_003735454.1| - 0.0091 15.8 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 Transmembrane protein 40 family Rad51 PF08423.11 gi|300709641|ref|YP_003735455.1| - 4.9e-74 248.8 0.0 2.3e-73 246.6 0.0 1.8 1 1 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|300709641|ref|YP_003735455.1| - 3.5e-11 43.5 0.0 7.8e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_25 PF13481.6 gi|300709641|ref|YP_003735455.1| - 1.4e-08 34.6 0.1 2e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 gi|300709641|ref|YP_003735455.1| - 3.7e-07 29.9 0.0 0.0095 15.4 0.1 2.3 1 1 0 2 2 2 2 recA bacterial DNA recombination protein HHH PF00633.23 gi|300709641|ref|YP_003735455.1| - 1.2e-06 28.1 0.1 0.00053 19.7 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|300709641|ref|YP_003735455.1| - 0.0002 21.4 0.0 0.00056 19.9 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif ATPase PF06745.13 gi|300709641|ref|YP_003735455.1| - 0.00029 20.2 0.0 0.0031 16.9 0.0 2.1 2 0 0 2 2 2 1 KaiC Cdd1 PF11731.8 gi|300709641|ref|YP_003735455.1| - 0.00034 20.8 0.0 0.00086 19.5 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|300709641|ref|YP_003735455.1| - 0.0019 17.9 0.0 0.0076 16.1 0.0 2.0 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda IMS_HHH PF11798.8 gi|300709641|ref|YP_003735455.1| - 0.012 15.8 0.0 0.042 14.2 0.0 1.9 1 0 0 1 1 1 0 IMS family HHH motif HHH_3 PF12836.7 gi|300709641|ref|YP_003735455.1| - 0.036 14.3 0.0 4.2 7.7 0.0 2.9 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF4332 PF14229.6 gi|300709641|ref|YP_003735455.1| - 0.045 14.0 0.1 0.43 10.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) Fer2 PF00111.27 gi|300709642|ref|YP_003735456.1| - 6.8e-14 51.6 0.1 8.8e-14 51.2 0.1 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|300709642|ref|YP_003735456.1| - 0.031 14.3 0.1 0.047 13.7 0.1 1.7 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain NifU_N PF01592.16 gi|300709643|ref|YP_003735457.1| - 1.3e-27 96.5 0.0 1.5e-27 96.3 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain SufE PF02657.15 gi|300709643|ref|YP_003735457.1| - 0.082 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain PQQ_3 PF13570.6 gi|300709644|ref|YP_003735458.1| - 5.5e-78 255.7 53.7 1.9e-12 47.3 2.3 8.4 8 0 0 8 8 8 8 PQQ-like domain PQQ PF01011.21 gi|300709644|ref|YP_003735458.1| - 1e-55 183.1 26.8 1.8e-12 46.5 0.1 9.5 9 1 0 9 9 9 8 PQQ enzyme repeat PQQ_2 PF13360.6 gi|300709644|ref|YP_003735458.1| - 1.6e-55 188.3 27.9 3.1e-25 89.2 5.3 3.6 1 1 3 4 4 4 4 PQQ-like domain WD40_like PF17005.5 gi|300709644|ref|YP_003735458.1| - 0.031 13.6 0.0 0.4 10.0 0.0 2.4 2 1 0 2 2 2 0 WD40-like domain PepSY PF03413.19 gi|300709644|ref|YP_003735458.1| - 0.038 14.5 0.9 28 5.4 0.0 3.7 3 0 0 3 3 3 0 Peptidase propeptide and YPEB domain Cytochrom_D1 PF02239.16 gi|300709644|ref|YP_003735458.1| - 0.051 12.1 0.0 0.1 11.1 0.0 1.5 1 0 0 1 1 1 0 Cytochrome D1 heme domain TAT_signal PF10518.9 gi|300709645|ref|YP_003735459.1| - 1 9.3 5.7 1.9 8.5 5.7 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Yae1_N PF09811.9 gi|300709645|ref|YP_003735459.1| - 2.2 8.0 10.3 0.7 9.6 1.4 3.4 3 1 0 3 3 3 0 Essential protein Yae1, N terminal Aminotran_5 PF00266.19 gi|300709646|ref|YP_003735460.1| - 1.3e-145 485.0 0.1 1.5e-145 484.8 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|300709646|ref|YP_003735460.1| - 1.8e-10 40.7 0.4 2.9e-10 40.0 0.4 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|300709646|ref|YP_003735460.1| - 1.2e-07 31.3 0.1 2.2e-07 30.4 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|300709646|ref|YP_003735460.1| - 1.1e-06 28.2 0.1 1.3e-06 27.9 0.1 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|300709646|ref|YP_003735460.1| - 9.2e-05 21.1 0.0 0.00015 20.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SelA PF03841.13 gi|300709646|ref|YP_003735460.1| - 0.00082 18.5 0.0 0.002 17.2 0.0 1.5 1 1 0 1 1 1 1 L-seryl-tRNA selenium transferase TatD_DNase PF01026.21 gi|300709647|ref|YP_003735461.1| - 2.3e-14 53.4 0.0 3.3e-14 52.9 0.0 1.4 1 1 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|300709647|ref|YP_003735461.1| - 4.2e-10 39.9 0.5 5.5e-10 39.5 0.5 1.3 1 1 0 1 1 1 1 Amidohydrolase AP_endonuc_2 PF01261.24 gi|300709647|ref|YP_003735461.1| - 0.0045 16.4 0.0 0.014 14.9 0.0 1.7 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF424 PF04242.13 gi|300709648|ref|YP_003735462.1| - 5.5e-31 106.7 0.1 6e-31 106.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) TPR_1 PF00515.28 gi|300709649|ref|YP_003735463.1| - 2.8e-24 83.9 10.1 3.5e-08 32.9 0.4 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|300709649|ref|YP_003735463.1| - 9.4e-23 78.5 18.8 4.3e-07 29.6 1.4 5.2 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|300709649|ref|YP_003735463.1| - 2.1e-21 74.3 5.6 6.8e-05 22.8 0.3 5.2 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|300709649|ref|YP_003735463.1| - 1.1e-17 64.1 22.6 4.1e-11 43.0 7.5 3.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|300709649|ref|YP_003735463.1| - 3.5e-15 56.3 20.4 4.2e-07 30.5 2.3 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|300709649|ref|YP_003735463.1| - 1e-14 53.9 3.6 1.6e-05 24.5 0.0 4.5 3 1 1 4 4 4 2 TPR repeat TPR_7 PF13176.6 gi|300709649|ref|YP_003735463.1| - 8.2e-13 47.4 14.8 7.6e-06 25.6 0.5 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|300709649|ref|YP_003735463.1| - 8.1e-11 41.8 24.4 0.0019 18.8 0.3 5.1 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_17 PF13431.6 gi|300709649|ref|YP_003735463.1| - 2.5e-09 36.9 1.7 0.0097 16.2 0.0 4.6 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|300709649|ref|YP_003735463.1| - 1.1e-08 35.1 10.9 9.1e-05 22.5 0.9 3.6 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|300709649|ref|YP_003735463.1| - 6.3e-08 32.2 22.5 0.0015 18.3 0.3 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|300709649|ref|YP_003735463.1| - 2.7e-07 31.0 4.3 0.00074 20.0 2.3 3.7 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_6 PF13174.6 gi|300709649|ref|YP_003735463.1| - 4.1e-07 30.2 11.2 0.72 10.6 0.2 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|300709649|ref|YP_003735463.1| - 4e-05 23.8 2.8 0.0015 18.7 0.3 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.14 gi|300709649|ref|YP_003735463.1| - 5.1e-05 23.5 28.3 0.0024 18.3 0.5 5.8 5 1 1 6 6 6 3 Tetratricopeptide repeat DUF3856 PF12968.7 gi|300709649|ref|YP_003735463.1| - 0.0014 18.8 10.5 0.05 13.7 0.9 3.6 1 1 2 3 3 3 2 Domain of Unknown Function (DUF3856) ANAPC5 PF12862.7 gi|300709649|ref|YP_003735463.1| - 0.0042 17.1 6.0 0.073 13.1 1.5 3.6 1 1 2 3 3 3 1 Anaphase-promoting complex subunit 5 TPR_5 PF12688.7 gi|300709649|ref|YP_003735463.1| - 0.0072 16.6 3.6 0.049 13.9 0.3 2.6 1 1 0 2 2 2 1 Tetratrico peptide repeat DUF5113 PF17140.4 gi|300709649|ref|YP_003735463.1| - 0.028 14.2 0.2 1.9 8.3 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5113) YfiO PF13525.6 gi|300709649|ref|YP_003735463.1| - 0.03 14.1 0.7 0.053 13.2 0.2 1.7 2 0 0 2 2 2 0 Outer membrane lipoprotein TPR_21 PF09976.9 gi|300709649|ref|YP_003735463.1| - 0.047 13.4 5.8 0.074 12.8 5.2 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat-like domain CAF1 PF04857.20 gi|300709649|ref|YP_003735463.1| - 0.052 12.7 0.2 0.061 12.5 0.2 1.1 1 0 0 1 1 1 0 CAF1 family ribonuclease DUF4326 PF14216.6 gi|300709649|ref|YP_003735463.1| - 0.18 12.5 0.3 22 5.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4326) MIT PF04212.18 gi|300709649|ref|YP_003735463.1| - 0.27 11.3 10.5 0.34 11.0 0.6 3.8 2 2 0 2 2 2 0 MIT (microtubule interacting and transport) domain SMBP PF16785.5 gi|300709649|ref|YP_003735463.1| - 2.9 8.1 15.9 0.66 10.2 4.2 3.4 2 1 1 3 3 3 0 Small metal-binding protein LigT_PEase PF02834.16 gi|300709650|ref|YP_003735464.1| - 8.6e-23 80.4 0.1 1.2e-13 51.1 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|300709650|ref|YP_003735464.1| - 1.6e-16 60.6 0.0 1.9e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|300709650|ref|YP_003735464.1| - 0.00043 20.2 0.0 0.00048 20.1 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Ribosomal_L39 PF00832.20 gi|300709652|ref|YP_003735466.1| - 2.4e-20 71.9 6.9 2.9e-20 71.6 6.9 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.19 gi|300709653|ref|YP_003735467.1| - 4.3e-09 36.5 0.1 5.2e-09 36.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.18 gi|300709654|ref|YP_003735468.1| - 5.6e-71 238.0 0.0 6.5e-71 237.8 0.0 1.0 1 0 0 1 1 1 1 eIF-6 family Prefoldin PF02996.17 gi|300709655|ref|YP_003735469.1| - 5.3e-27 94.1 6.7 5.3e-27 94.1 6.7 1.9 2 1 0 2 2 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|300709655|ref|YP_003735469.1| - 5e-08 32.8 15.7 8.1e-06 25.7 6.6 2.9 1 1 2 3 3 2 2 Prefoldin subunit Seryl_tRNA_N PF02403.22 gi|300709655|ref|YP_003735469.1| - 4.7e-06 26.8 12.7 0.0029 17.8 6.4 2.3 2 0 0 2 2 2 2 Seryl-tRNA synthetase N-terminal domain DUF812 PF05667.11 gi|300709655|ref|YP_003735469.1| - 7.8e-06 25.1 20.4 0.0011 18.0 12.7 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF812) LPP PF04728.13 gi|300709655|ref|YP_003735469.1| - 9.7e-06 25.9 19.5 0.0047 17.3 6.2 2.8 2 1 0 2 2 2 2 Lipoprotein leucine-zipper DUF4407 PF14362.6 gi|300709655|ref|YP_003735469.1| - 6e-05 22.6 19.9 0.00013 21.5 17.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) APG6_N PF17675.1 gi|300709655|ref|YP_003735469.1| - 6.9e-05 23.4 29.6 0.011 16.3 15.5 2.1 2 0 0 2 2 2 2 Apg6 coiled-coil region Spc24 PF08286.11 gi|300709655|ref|YP_003735469.1| - 7.2e-05 23.0 17.2 0.018 15.3 0.2 2.2 2 0 0 2 2 2 2 Spc24 subunit of Ndc80 FliD_C PF07195.12 gi|300709655|ref|YP_003735469.1| - 0.00015 21.3 9.7 0.00035 20.1 4.6 2.0 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus Uso1_p115_C PF04871.13 gi|300709655|ref|YP_003735469.1| - 0.00019 21.8 18.8 0.017 15.4 0.1 2.1 2 0 0 2 2 2 1 Uso1 / p115 like vesicle tethering protein, C terminal region DHR10 PF18595.1 gi|300709655|ref|YP_003735469.1| - 0.0002 21.4 21.6 0.043 13.9 1.9 2.3 2 0 0 2 2 2 2 Designed helical repeat protein 10 domain Uds1 PF15456.6 gi|300709655|ref|YP_003735469.1| - 0.00025 21.2 7.1 0.00047 20.3 6.4 1.9 1 1 0 1 1 1 1 Up-regulated During Septation OmpH PF03938.14 gi|300709655|ref|YP_003735469.1| - 0.00031 21.1 28.6 0.0048 17.2 18.6 2.1 2 0 0 2 2 2 2 Outer membrane protein (OmpH-like) Snapin_Pallidin PF14712.6 gi|300709655|ref|YP_003735469.1| - 0.0015 18.9 1.9 0.0015 18.9 1.9 3.1 2 1 1 3 3 2 1 Snapin/Pallidin ZapB PF06005.12 gi|300709655|ref|YP_003735469.1| - 0.0017 18.7 32.5 0.16 12.4 18.5 2.2 2 0 0 2 2 2 2 Cell division protein ZapB JIP_LZII PF16471.5 gi|300709655|ref|YP_003735469.1| - 0.0018 18.4 15.6 0.13 12.4 1.8 2.3 2 0 0 2 2 2 2 JNK-interacting protein leucine zipper II DivIC PF04977.15 gi|300709655|ref|YP_003735469.1| - 0.0019 18.0 18.2 0.012 15.3 4.1 3.1 2 1 1 3 3 2 2 Septum formation initiator XhlA PF10779.9 gi|300709655|ref|YP_003735469.1| - 0.0023 18.1 11.4 0.09 13.0 4.7 2.7 2 1 0 2 2 2 1 Haemolysin XhlA Not3 PF04065.15 gi|300709655|ref|YP_003735469.1| - 0.0025 17.3 17.5 0.0066 15.9 9.9 2.1 2 0 0 2 2 2 1 Not1 N-terminal domain, CCR4-Not complex component TMF_DNA_bd PF12329.8 gi|300709655|ref|YP_003735469.1| - 0.0037 17.2 19.5 0.17 11.9 8.5 2.5 2 1 0 2 2 2 2 TATA element modulatory factor 1 DNA binding HOOK PF05622.12 gi|300709655|ref|YP_003735469.1| - 0.0048 15.1 2.8 0.0048 15.1 2.8 2.0 1 1 1 2 2 2 1 HOOK protein ATP-synt_D PF01813.17 gi|300709655|ref|YP_003735469.1| - 0.0049 16.7 7.3 0.033 14.0 5.2 2.1 2 0 0 2 2 2 1 ATP synthase subunit D CENP-F_leu_zip PF10473.9 gi|300709655|ref|YP_003735469.1| - 0.0057 16.7 26.5 0.041 13.9 1.6 2.4 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SKA2 PF16740.5 gi|300709655|ref|YP_003735469.1| - 0.0061 16.3 15.2 0.29 10.9 0.2 2.2 2 0 0 2 2 2 1 Spindle and kinetochore-associated protein 2 DUF3450 PF11932.8 gi|300709655|ref|YP_003735469.1| - 0.0068 15.7 28.3 0.11 11.8 2.9 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3450) Cob_adeno_trans PF01923.18 gi|300709655|ref|YP_003735469.1| - 0.0077 16.4 5.4 0.01 16.0 3.3 2.0 1 1 1 2 2 2 1 Cobalamin adenosyltransferase Spc7 PF08317.11 gi|300709655|ref|YP_003735469.1| - 0.0086 15.0 23.0 0.041 12.8 1.9 2.0 2 0 0 2 2 2 1 Spc7 kinetochore protein CALCOCO1 PF07888.11 gi|300709655|ref|YP_003735469.1| - 0.01 14.8 17.0 0.078 11.8 9.6 2.0 2 0 0 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like UPF0242 PF06785.11 gi|300709655|ref|YP_003735469.1| - 0.01 15.9 19.3 0.12 12.4 11.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF3287 PF11690.8 gi|300709655|ref|YP_003735469.1| - 0.011 15.4 0.7 0.2 11.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) FapA PF03961.13 gi|300709655|ref|YP_003735469.1| - 0.012 14.2 13.1 0.026 13.2 6.2 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A FlaC_arch PF05377.11 gi|300709655|ref|YP_003735469.1| - 0.013 15.8 18.2 0.092 13.1 4.8 3.7 3 2 1 4 4 3 0 Flagella accessory protein C (FlaC) Golgin_A5 PF09787.9 gi|300709655|ref|YP_003735469.1| - 0.014 14.9 14.1 0.014 14.9 14.1 2.0 2 0 0 2 2 2 0 Golgin subfamily A member 5 Mod_r PF07200.13 gi|300709655|ref|YP_003735469.1| - 0.015 15.4 21.7 0.12 12.5 1.2 2.1 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein BLOC1_2 PF10046.9 gi|300709655|ref|YP_003735469.1| - 0.016 15.5 17.0 0.46 10.8 1.7 2.7 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GPS2_interact PF15784.5 gi|300709655|ref|YP_003735469.1| - 0.018 15.5 8.2 0.018 15.5 8.2 2.1 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain KfrA_N PF11740.8 gi|300709655|ref|YP_003735469.1| - 0.021 15.5 5.2 0.021 15.5 5.2 3.3 1 1 1 3 3 2 0 Plasmid replication region DNA-binding N-term GAS PF13851.6 gi|300709655|ref|YP_003735469.1| - 0.025 13.9 20.1 0.23 10.8 0.3 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding AAA_13 PF13166.6 gi|300709655|ref|YP_003735469.1| - 0.03 13.0 12.8 0.41 9.2 6.2 2.0 2 0 0 2 2 2 0 AAA domain DUF4795 PF16043.5 gi|300709655|ref|YP_003735469.1| - 0.032 13.8 13.1 0.16 11.5 6.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) Filament PF00038.21 gi|300709655|ref|YP_003735469.1| - 0.033 13.8 18.4 0.48 9.9 9.5 2.0 2 0 0 2 2 2 0 Intermediate filament protein HAUS-augmin3 PF14932.6 gi|300709655|ref|YP_003735469.1| - 0.034 13.7 2.1 0.034 13.7 2.1 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 Occludin_ELL PF07303.13 gi|300709655|ref|YP_003735469.1| - 0.037 14.7 11.7 2.6 8.8 7.0 2.2 2 0 0 2 2 2 0 Occludin homology domain DUF1664 PF07889.12 gi|300709655|ref|YP_003735469.1| - 0.037 14.1 15.3 0.74 9.9 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Tropomyosin_1 PF12718.7 gi|300709655|ref|YP_003735469.1| - 0.039 14.1 23.9 0.4 10.8 2.8 2.2 2 0 0 2 2 2 0 Tropomyosin like V_ATPase_I PF01496.19 gi|300709655|ref|YP_003735469.1| - 0.044 11.7 10.0 0.1 10.5 4.9 2.0 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Spectrin PF00435.21 gi|300709655|ref|YP_003735469.1| - 0.045 14.2 19.0 1.3 9.5 11.2 2.3 2 0 0 2 2 2 0 Spectrin repeat Ax_dynein_light PF10211.9 gi|300709655|ref|YP_003735469.1| - 0.045 13.7 20.9 0.18 11.8 13.5 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain Phage_GP20 PF06810.11 gi|300709655|ref|YP_003735469.1| - 0.048 13.5 18.7 0.36 10.6 11.0 2.1 2 0 0 2 2 2 0 Phage minor structural protein GP20 bZIP_1 PF00170.21 gi|300709655|ref|YP_003735469.1| - 0.056 13.5 11.8 0.34 11.0 2.3 2.6 2 1 0 2 2 2 0 bZIP transcription factor PhoU PF01895.19 gi|300709655|ref|YP_003735469.1| - 0.057 13.9 8.1 0.17 12.4 3.7 2.3 2 0 0 2 2 2 0 PhoU domain Allexi_40kDa PF05549.11 gi|300709655|ref|YP_003735469.1| - 0.062 12.8 5.3 0.28 10.7 1.8 2.0 2 0 0 2 2 2 0 Allexivirus 40kDa protein YabA PF06156.13 gi|300709655|ref|YP_003735469.1| - 0.066 13.9 16.1 0.93 10.2 0.2 2.1 2 0 0 2 2 2 0 Initiation control protein YabA ABC_tran_CTD PF16326.5 gi|300709655|ref|YP_003735469.1| - 0.075 13.3 31.8 0.28 11.4 14.1 3.4 2 2 0 2 2 2 0 ABC transporter C-terminal domain DUF3086 PF11285.8 gi|300709655|ref|YP_003735469.1| - 0.077 12.1 9.4 0.96 8.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3086) Syntaxin-6_N PF09177.11 gi|300709655|ref|YP_003735469.1| - 0.08 13.5 17.8 0.28 11.7 8.5 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal COG5 PF10392.9 gi|300709655|ref|YP_003735469.1| - 0.081 13.1 6.9 0.46 10.7 2.2 2.3 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Fzo_mitofusin PF04799.13 gi|300709655|ref|YP_003735469.1| - 0.082 12.5 12.7 0.49 9.9 4.0 2.3 2 0 0 2 2 2 0 fzo-like conserved region CENP-H PF05837.12 gi|300709655|ref|YP_003735469.1| - 0.083 13.3 21.3 0.41 11.1 12.7 2.1 2 0 0 2 2 2 0 Centromere protein H (CENP-H) NPV_P10 PF05531.12 gi|300709655|ref|YP_003735469.1| - 0.088 13.3 20.1 9.9e+03 -2.9 20.1 2.8 1 1 0 1 1 0 0 Nucleopolyhedrovirus P10 protein Vps5 PF09325.10 gi|300709655|ref|YP_003735469.1| - 0.099 12.2 11.9 0.42 10.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like TMPIT PF07851.13 gi|300709655|ref|YP_003735469.1| - 0.1 11.8 13.0 5 6.3 0.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein DUF2730 PF10805.8 gi|300709655|ref|YP_003735469.1| - 0.11 12.6 8.5 3.1 8.0 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) UPF0184 PF03670.13 gi|300709655|ref|YP_003735469.1| - 0.11 12.9 9.7 1 9.8 2.9 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) PRKG1_interact PF15898.5 gi|300709655|ref|YP_003735469.1| - 0.11 13.4 20.1 1.4 9.9 12.3 2.1 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Sec34 PF04136.15 gi|300709655|ref|YP_003735469.1| - 0.13 12.2 16.9 0.76 9.6 0.7 2.1 2 0 0 2 2 2 0 Sec34-like family Nsp1_C PF05064.13 gi|300709655|ref|YP_003735469.1| - 0.13 12.1 17.5 0.79 9.6 2.1 2.3 2 0 0 2 2 2 0 Nsp1-like C-terminal region PspA_IM30 PF04012.12 gi|300709655|ref|YP_003735469.1| - 0.13 11.8 24.5 0.3 10.6 16.0 2.1 2 0 0 2 2 2 0 PspA/IM30 family Fib_alpha PF08702.10 gi|300709655|ref|YP_003735469.1| - 0.14 12.3 15.9 2.4 8.3 10.5 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family End3 PF12761.7 gi|300709655|ref|YP_003735469.1| - 0.15 12.2 15.4 0.57 10.3 7.4 2.2 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 AAA_23 PF13476.6 gi|300709655|ref|YP_003735469.1| - 0.17 12.3 20.4 0.27 11.7 10.1 2.1 2 0 0 2 2 2 0 AAA domain DUF1515 PF07439.11 gi|300709655|ref|YP_003735469.1| - 0.19 11.8 6.7 6.6 6.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) DUF4140 PF13600.6 gi|300709655|ref|YP_003735469.1| - 0.22 12.0 22.7 1.4 9.4 10.6 2.9 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) GrpE PF01025.19 gi|300709655|ref|YP_003735469.1| - 0.24 11.0 22.3 0.48 10.1 13.1 2.1 2 0 0 2 2 2 0 GrpE DUF4337 PF14235.6 gi|300709655|ref|YP_003735469.1| - 0.25 11.5 15.6 1.8 8.6 10.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) MtrB PF05440.12 gi|300709655|ref|YP_003735469.1| - 0.26 11.7 2.4 2.1 8.8 0.3 2.4 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B Tektin PF03148.14 gi|300709655|ref|YP_003735469.1| - 0.27 9.9 20.6 0.53 9.0 10.3 2.2 2 0 0 2 2 2 0 Tektin family HAUS6_N PF14661.6 gi|300709655|ref|YP_003735469.1| - 0.27 10.8 16.0 6.4 6.3 12.6 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus Swi5 PF07061.11 gi|300709655|ref|YP_003735469.1| - 0.27 11.3 17.0 2.9 8.0 8.0 2.8 2 1 0 2 2 2 0 Swi5 MscS_porin PF12795.7 gi|300709655|ref|YP_003735469.1| - 0.27 10.7 36.1 0.032 13.8 3.8 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Sugarporin_N PF11471.8 gi|300709655|ref|YP_003735469.1| - 0.28 11.2 7.2 1.2 9.1 7.2 2.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension TMF_TATA_bd PF12325.8 gi|300709655|ref|YP_003735469.1| - 0.29 11.4 23.8 0.47 10.7 2.8 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding ATG16 PF08614.11 gi|300709655|ref|YP_003735469.1| - 0.3 11.3 25.1 0.084 13.1 1.3 2.1 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF5082 PF16888.5 gi|300709655|ref|YP_003735469.1| - 0.31 11.3 21.9 1.3 9.3 1.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) DUF4391 PF14335.6 gi|300709655|ref|YP_003735469.1| - 0.32 10.7 9.6 0.036 13.8 4.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4391) TSC22 PF01166.18 gi|300709655|ref|YP_003735469.1| - 0.32 11.3 20.0 0.078 13.3 8.8 2.9 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF4164 PF13747.6 gi|300709655|ref|YP_003735469.1| - 0.36 11.1 16.6 1.3 9.3 6.9 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) CorA PF01544.18 gi|300709655|ref|YP_003735469.1| - 0.37 10.0 12.4 0.4 10.0 6.3 2.3 2 1 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF4988 PF16378.5 gi|300709655|ref|YP_003735469.1| - 0.38 10.4 7.2 3.1 7.4 3.3 2.2 2 0 0 2 2 2 0 Domain of unknown function CENP-Q PF13094.6 gi|300709655|ref|YP_003735469.1| - 0.38 10.9 23.8 2 8.6 2.5 2.1 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit FH2 PF02181.23 gi|300709655|ref|YP_003735469.1| - 0.39 9.8 10.4 0.2 10.7 3.4 2.0 2 0 0 2 2 2 0 Formin Homology 2 Domain Laminin_II PF06009.12 gi|300709655|ref|YP_003735469.1| - 0.41 10.7 15.0 4.1 7.4 0.4 2.3 2 1 0 2 2 2 0 Laminin Domain II DUF1192 PF06698.11 gi|300709655|ref|YP_003735469.1| - 0.42 10.7 11.3 0.1 12.7 2.9 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) HAUS5 PF14817.6 gi|300709655|ref|YP_003735469.1| - 0.51 9.0 18.5 0.25 10.1 12.2 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 5 MutS_IV PF05190.18 gi|300709655|ref|YP_003735469.1| - 0.52 10.7 10.4 0.69 10.3 2.2 2.8 2 2 0 2 2 2 0 MutS family domain IV DUF948 PF06103.11 gi|300709655|ref|YP_003735469.1| - 0.54 10.6 13.9 2e+03 -0.9 13.9 2.7 1 1 0 1 1 0 0 Bacterial protein of unknown function (DUF948) DUF641 PF04859.12 gi|300709655|ref|YP_003735469.1| - 0.54 10.6 14.0 0.16 12.3 4.6 2.5 2 1 0 2 2 2 0 Plant protein of unknown function (DUF641) TFR_dimer PF04253.15 gi|300709655|ref|YP_003735469.1| - 0.55 10.4 6.9 2.4 8.3 1.8 2.4 2 1 0 2 2 2 0 Transferrin receptor-like dimerisation domain MCU PF04678.13 gi|300709655|ref|YP_003735469.1| - 0.56 10.3 11.7 0.91 9.6 4.8 2.2 1 1 1 2 2 2 0 Mitochondrial calcium uniporter ADIP PF11559.8 gi|300709655|ref|YP_003735469.1| - 0.56 10.3 25.5 2.5 8.2 1.8 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding TolA_bind_tri PF16331.5 gi|300709655|ref|YP_003735469.1| - 0.56 10.3 36.7 0.071 13.2 3.9 3.2 2 1 1 3 3 2 0 TolA binding protein trimerisation HemX PF04375.14 gi|300709655|ref|YP_003735469.1| - 0.57 9.4 25.9 0.61 9.3 2.4 2.0 2 0 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 gi|300709655|ref|YP_003735469.1| - 0.63 10.5 17.7 2.7 8.5 8.2 2.6 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ACCA PF03255.14 gi|300709655|ref|YP_003735469.1| - 0.78 9.6 11.8 11 5.9 0.1 2.4 2 1 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Lipase_chap PF03280.14 gi|300709655|ref|YP_003735469.1| - 0.82 9.6 27.5 2.1 8.3 17.7 2.1 2 0 0 2 2 2 0 Proteobacterial lipase chaperone protein IFT57 PF10498.9 gi|300709655|ref|YP_003735469.1| - 0.83 8.6 20.4 0.11 11.4 0.7 2.0 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 BRI3BP PF14965.6 gi|300709655|ref|YP_003735469.1| - 0.85 9.1 2.1 3.3 7.2 0.3 2.1 2 0 0 2 2 2 0 Negative regulator of p53/TP53 ORF6C PF10552.9 gi|300709655|ref|YP_003735469.1| - 0.9 9.6 14.2 2.2 8.4 0.5 2.2 2 0 0 2 2 2 0 ORF6C domain DUF724 PF05266.14 gi|300709655|ref|YP_003735469.1| - 1.1 9.1 18.6 4.9 6.9 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) ApoO PF09769.9 gi|300709655|ref|YP_003735469.1| - 1.1 9.2 3.3 1.2 9.1 1.0 2.0 2 0 0 2 2 2 0 Apolipoprotein O MnmE_helical PF12631.7 gi|300709655|ref|YP_003735469.1| - 1.1 9.4 11.5 2.3 8.3 11.5 1.6 1 1 0 1 1 1 0 MnmE helical domain DUF2937 PF11157.8 gi|300709655|ref|YP_003735469.1| - 1.1 8.9 11.2 3.2 7.4 6.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) DUF4446 PF14584.6 gi|300709655|ref|YP_003735469.1| - 1.2 9.1 10.8 9.7 6.2 6.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Alanine_zipper PF11839.8 gi|300709655|ref|YP_003735469.1| - 1.3 9.4 17.9 0.88 10.0 8.0 2.6 2 1 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Prominin PF05478.11 gi|300709655|ref|YP_003735469.1| - 1.4 6.8 8.6 11 3.9 6.1 2.0 2 0 0 2 2 2 0 Prominin HalX PF08663.10 gi|300709655|ref|YP_003735469.1| - 1.4 9.3 23.2 3.9 7.9 5.5 3.4 2 2 0 2 2 2 0 HalX domain Macoilin PF09726.9 gi|300709655|ref|YP_003735469.1| - 1.5 7.3 12.9 0.25 9.9 6.5 2.0 2 0 0 2 2 2 0 Macoilin family DUF2203 PF09969.9 gi|300709655|ref|YP_003735469.1| - 1.6 9.5 13.8 7.6 7.3 0.1 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) TraF_2 PF13729.6 gi|300709655|ref|YP_003735469.1| - 1.9 7.8 12.3 2.6 7.3 5.1 2.2 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein Tho2 PF11262.8 gi|300709655|ref|YP_003735469.1| - 1.9 7.6 9.7 0.88 8.7 3.8 2.0 2 0 0 2 2 2 0 Transcription factor/nuclear export subunit protein 2 RPW8 PF05659.11 gi|300709655|ref|YP_003735469.1| - 1.9 8.1 7.4 0.55 9.9 0.4 2.7 2 1 1 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 TPR_MLP1_2 PF07926.12 gi|300709655|ref|YP_003735469.1| - 1.9 8.5 33.2 0.17 11.9 11.0 3.1 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein LMBR1 PF04791.16 gi|300709655|ref|YP_003735469.1| - 2 7.3 4.3 2.5 6.9 4.3 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein SKA1 PF07160.12 gi|300709655|ref|YP_003735469.1| - 2.2 8.1 16.6 6 6.6 10.6 2.1 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 HMMR_N PF15905.5 gi|300709655|ref|YP_003735469.1| - 2.3 7.6 24.3 0.59 9.5 14.2 2.0 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Baculo_F PF12259.8 gi|300709655|ref|YP_003735469.1| - 2.4 6.6 7.6 9.9 4.5 5.0 2.0 2 0 0 2 2 2 0 Baculovirus F protein AAA_lid_9 PF17871.1 gi|300709655|ref|YP_003735469.1| - 2.4 8.1 14.3 5 7.1 8.2 2.4 2 0 0 2 2 2 0 AAA lid domain YlqD PF11068.8 gi|300709655|ref|YP_003735469.1| - 2.4 8.5 31.2 2.3 8.6 2.0 2.2 2 0 0 2 2 2 0 YlqD protein DUF4239 PF14023.6 gi|300709655|ref|YP_003735469.1| - 2.5 7.8 6.2 11 5.6 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4239) Tup_N PF08581.10 gi|300709655|ref|YP_003735469.1| - 2.5 8.4 20.2 1.4 9.3 1.6 2.3 2 0 0 2 2 2 0 Tup N-terminal FemAB PF02388.16 gi|300709655|ref|YP_003735469.1| - 2.7 6.8 14.8 2.8 6.7 0.1 2.1 2 0 0 2 2 2 0 FemAB family DUF4200 PF13863.6 gi|300709655|ref|YP_003735469.1| - 3.2 8.2 24.0 1.3 9.5 0.9 2.9 2 1 1 3 3 2 0 Domain of unknown function (DUF4200) zf-CpG_bind_C PF12269.8 gi|300709655|ref|YP_003735469.1| - 3.3 7.4 13.3 5.3 6.8 7.7 2.1 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain FUSC PF04632.12 gi|300709655|ref|YP_003735469.1| - 3.3 6.1 8.6 9.9 4.6 8.6 1.7 1 1 0 1 1 1 0 Fusaric acid resistance protein family RasGAP_C PF03836.15 gi|300709655|ref|YP_003735469.1| - 4.3 7.5 14.3 3.8 7.7 8.0 2.2 2 0 0 2 2 2 0 RasGAP C-terminus COG2 PF06148.11 gi|300709655|ref|YP_003735469.1| - 4.9 7.2 17.5 3.9 7.6 1.7 2.4 1 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Spc19 PF08287.11 gi|300709655|ref|YP_003735469.1| - 5 7.0 21.8 3.3 7.6 12.5 2.1 1 1 1 2 2 2 0 Spc19 Muted PF14942.6 gi|300709655|ref|YP_003735469.1| - 5 7.4 20.6 8.8 6.7 13.5 2.1 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein Phage_GPO PF05929.11 gi|300709655|ref|YP_003735469.1| - 5.6 6.5 17.1 1.6 8.3 7.9 2.1 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase STAT_alpha PF01017.20 gi|300709655|ref|YP_003735469.1| - 5.7 6.8 23.7 50 3.7 23.2 2.0 1 1 0 1 1 1 0 STAT protein, all-alpha domain Jnk-SapK_ap_N PF09744.9 gi|300709655|ref|YP_003735469.1| - 5.7 7.2 26.8 8.1 6.6 2.2 2.2 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 Atg14 PF10186.9 gi|300709655|ref|YP_003735469.1| - 5.9 5.9 17.9 51 2.8 17.9 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DASH_Spc34 PF08657.10 gi|300709655|ref|YP_003735469.1| - 6.3 6.5 18.3 0.54 10.0 9.7 2.0 1 1 0 2 2 2 0 DASH complex subunit Spc34 FlxA PF14282.6 gi|300709655|ref|YP_003735469.1| - 6.4 6.8 43.0 2.1 8.4 3.8 2.6 2 1 0 2 2 2 0 FlxA-like protein DASH_Dam1 PF08653.10 gi|300709655|ref|YP_003735469.1| - 7 6.5 10.2 12 5.8 1.0 3.4 2 2 1 3 3 2 0 DASH complex subunit Dam1 PP2C_C PF07830.13 gi|300709655|ref|YP_003735469.1| - 7.5 7.1 11.9 2 8.9 0.2 2.4 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain SLX9 PF15341.6 gi|300709655|ref|YP_003735469.1| - 8 6.9 13.4 12 6.3 6.1 2.1 2 0 0 2 2 2 0 Ribosome biogenesis protein SLX9 WXG100 PF06013.12 gi|300709655|ref|YP_003735469.1| - 8.1 6.8 24.2 13 6.1 0.8 3.1 2 2 0 2 2 2 0 Proteins of 100 residues with WXG TPD52 PF04201.15 gi|300709655|ref|YP_003735469.1| - 8.5 6.0 11.7 0.39 10.3 2.9 2.1 2 0 0 2 2 2 0 Tumour protein D52 family zf-C4H2 PF10146.9 gi|300709655|ref|YP_003735469.1| - 8.9 6.5 19.1 3.6 7.8 0.7 2.0 2 0 0 2 2 2 0 Zinc finger-containing protein Mobilization_B PF17511.2 gi|300709655|ref|YP_003735469.1| - 9.4 6.6 12.7 12 6.3 10.4 2.0 2 0 0 2 2 2 0 Mobilization protein B DUF2408 PF10303.9 gi|300709655|ref|YP_003735469.1| - 9.4 6.8 16.2 5e+03 -2.0 16.2 2.3 1 1 0 1 1 0 0 Protein of unknown function (DUF2408) DUF3391 PF11871.8 gi|300709655|ref|YP_003735469.1| - 9.9 6.7 14.9 6.6 7.3 8.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) SRP54 PF00448.22 gi|300709656|ref|YP_003735470.1| - 1.8e-67 226.8 0.2 2.3e-67 226.4 0.2 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|300709656|ref|YP_003735470.1| - 5.1e-10 39.4 0.8 1.4e-09 38.0 0.6 1.9 1 1 0 1 1 1 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.12 gi|300709656|ref|YP_003735470.1| - 1.1e-05 24.8 0.1 1.8e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Zeta toxin APS_kinase PF01583.20 gi|300709656|ref|YP_003735470.1| - 2.3e-05 24.3 0.0 4.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase Thymidylate_kin PF02223.17 gi|300709656|ref|YP_003735470.1| - 0.00027 20.7 0.0 0.0027 17.4 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase CbiA PF01656.23 gi|300709656|ref|YP_003735470.1| - 0.00035 20.6 0.0 0.00083 19.4 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.6 gi|300709656|ref|YP_003735470.1| - 0.00038 20.7 0.1 0.0013 18.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|300709656|ref|YP_003735470.1| - 0.00038 20.9 0.4 0.0016 18.9 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|300709656|ref|YP_003735470.1| - 0.0005 19.9 0.2 0.00077 19.2 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|300709656|ref|YP_003735470.1| - 0.0025 18.2 0.5 0.0084 16.5 0.1 2.0 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|300709656|ref|YP_003735470.1| - 0.0028 17.6 0.1 0.006 16.5 0.1 1.5 1 0 0 1 1 1 1 NTPase KTI12 PF08433.10 gi|300709656|ref|YP_003735470.1| - 0.0052 16.3 0.0 0.0088 15.5 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_28 PF13521.6 gi|300709656|ref|YP_003735470.1| - 0.0071 16.6 2.3 0.023 14.9 0.4 2.6 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|300709656|ref|YP_003735470.1| - 0.0071 16.6 0.1 0.03 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|300709656|ref|YP_003735470.1| - 0.0097 14.9 0.3 0.029 13.4 0.3 1.8 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB LytR_C PF13399.6 gi|300709656|ref|YP_003735470.1| - 0.012 16.6 1.4 0.027 15.5 0.4 2.1 2 0 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator ATP_bind_1 PF03029.17 gi|300709656|ref|YP_003735470.1| - 0.012 15.4 0.0 0.02 14.7 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein SIS_2 PF13580.6 gi|300709656|ref|YP_003735470.1| - 0.095 12.7 0.4 0.77 9.8 0.0 2.4 3 0 0 3 3 2 0 SIS domain AAA_29 PF13555.6 gi|300709656|ref|YP_003735470.1| - 0.098 12.4 0.1 0.28 10.9 0.0 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain PPK2 PF03976.14 gi|300709656|ref|YP_003735470.1| - 0.099 12.1 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) MobB PF03205.14 gi|300709656|ref|YP_003735470.1| - 0.13 12.2 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_31 PF13614.6 gi|300709656|ref|YP_003735470.1| - 0.13 12.2 0.1 0.25 11.2 0.0 1.5 2 0 0 2 2 1 0 AAA domain AAA_7 PF12775.7 gi|300709656|ref|YP_003735470.1| - 0.16 11.4 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region FAP PF07174.11 gi|300709656|ref|YP_003735470.1| - 1.6 8.1 14.5 5.1 6.5 14.6 1.7 2 0 0 2 2 2 0 Fibronectin-attachment protein (FAP) Polysacc_synt_3 PF13440.6 gi|300709657|ref|YP_003735471.1| - 2e-27 96.2 5.3 2e-27 96.2 5.3 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|300709657|ref|YP_003735471.1| - 2.9e-27 95.7 14.3 2.9e-27 95.7 14.3 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|300709657|ref|YP_003735471.1| - 1e-17 64.5 37.3 8.5e-17 61.6 16.3 3.4 4 0 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|300709657|ref|YP_003735471.1| - 1.6e-11 44.2 28.5 1.2e-09 38.1 12.1 3.1 3 0 0 3 3 3 2 MatE Beta_helix PF13229.6 gi|300709658|ref|YP_003735472.1| - 3.9e-06 26.8 0.9 6.4e-06 26.1 0.2 1.9 2 1 0 2 2 2 1 Right handed beta helix region PMT_2 PF13231.6 gi|300709659|ref|YP_003735473.1| - 0.00012 22.3 16.9 0.00012 22.3 16.9 4.9 3 3 2 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase TMEM51 PF15345.6 gi|300709659|ref|YP_003735473.1| - 0.14 11.9 1.9 6.7 6.5 0.2 2.4 2 0 0 2 2 2 0 Transmembrane protein 51 SRP54 PF00448.22 gi|300709660|ref|YP_003735474.1| - 8.2e-64 214.9 0.1 1.6e-63 213.9 0.1 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|300709660|ref|YP_003735474.1| - 1.6e-28 99.3 7.2 1.9e-28 99.0 3.2 2.8 2 1 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|300709660|ref|YP_003735474.1| - 2.9e-17 62.6 0.3 2.9e-17 62.6 0.3 2.7 4 0 0 4 4 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|300709660|ref|YP_003735474.1| - 0.00017 21.7 0.0 0.00039 20.5 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|300709660|ref|YP_003735474.1| - 0.0013 18.0 4.2 0.027 13.7 0.0 3.1 3 0 0 3 3 3 1 Anion-transporting ATPase Zeta_toxin PF06414.12 gi|300709660|ref|YP_003735474.1| - 0.0034 16.7 0.0 0.012 14.9 0.0 2.0 1 0 0 1 1 1 1 Zeta toxin SMC_N PF02463.19 gi|300709660|ref|YP_003735474.1| - 0.0063 16.0 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 gi|300709660|ref|YP_003735474.1| - 0.0078 16.0 0.2 0.02 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|300709660|ref|YP_003735474.1| - 0.0096 15.5 0.1 0.074 12.6 0.1 2.2 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 gi|300709660|ref|YP_003735474.1| - 0.011 15.6 0.0 0.03 14.2 0.0 1.7 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_33 PF13671.6 gi|300709660|ref|YP_003735474.1| - 0.018 15.2 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|300709660|ref|YP_003735474.1| - 0.031 14.8 0.0 0.14 12.7 0.0 2.3 2 1 0 2 2 2 0 AAA domain PRK PF00485.18 gi|300709660|ref|YP_003735474.1| - 0.039 13.7 0.0 0.098 12.4 0.0 1.7 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family TrwB_AAD_bind PF10412.9 gi|300709660|ref|YP_003735474.1| - 0.04 12.8 0.0 0.091 11.6 0.0 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|300709660|ref|YP_003735474.1| - 0.041 14.1 0.0 0.15 12.3 0.0 2.1 2 0 0 2 2 1 0 AAA domain MobB PF03205.14 gi|300709660|ref|YP_003735474.1| - 0.045 13.7 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 gi|300709660|ref|YP_003735474.1| - 0.078 13.4 0.0 0.3 11.5 0.0 2.0 1 0 0 1 1 1 0 AAA ATPase domain ResIII PF04851.15 gi|300709660|ref|YP_003735474.1| - 0.09 12.8 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_31 PF13614.6 gi|300709660|ref|YP_003735474.1| - 0.097 12.6 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|300709660|ref|YP_003735474.1| - 0.1 12.3 0.8 0.73 9.5 0.0 2.5 2 0 0 2 2 2 0 Thymidylate kinase KdpC PF02669.15 gi|300709660|ref|YP_003735474.1| - 0.12 12.2 0.4 0.28 11.0 0.0 1.7 2 0 0 2 2 1 0 K+-transporting ATPase, c chain KTI12 PF08433.10 gi|300709660|ref|YP_003735474.1| - 0.15 11.4 0.0 0.33 10.4 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_25 PF13481.6 gi|300709660|ref|YP_003735474.1| - 4.4 6.8 5.4 6.6 6.3 3.0 2.5 2 1 0 2 2 2 0 AAA domain RNA_binding PF01877.17 gi|300709661|ref|YP_003735475.1| - 7.1e-10 39.2 0.6 2.3e-08 34.3 0.6 2.1 1 1 0 1 1 1 1 RNA binding AAA_17 PF13207.6 gi|300709662|ref|YP_003735476.1| - 2.9e-16 60.1 0.1 4.2e-16 59.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|300709662|ref|YP_003735476.1| - 4.5e-09 36.9 0.0 5.7e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|300709662|ref|YP_003735476.1| - 5.9e-06 26.5 0.0 9.1e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|300709662|ref|YP_003735476.1| - 0.00023 21.3 0.0 0.00027 21.1 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase Pribosyltran PF00156.27 gi|300709664|ref|YP_003735478.1| - 1.7e-12 47.2 0.5 2.4e-12 46.7 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300709664|ref|YP_003735478.1| - 1.7e-05 24.3 0.1 2.3e-05 23.9 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|300709665|ref|YP_003735479.1| - 6.8e-10 38.7 0.2 1.2e-09 37.9 0.2 1.4 1 1 0 1 1 1 1 Phosphoribosyl transferase domain HTH_3 PF01381.22 gi|300709665|ref|YP_003735479.1| - 0.032 14.3 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix MOFRL PF05161.13 gi|300709665|ref|YP_003735479.1| - 0.037 14.2 1.1 0.4 10.9 0.3 2.2 2 0 0 2 2 2 0 MOFRL family Xan_ur_permease PF00860.20 gi|300709666|ref|YP_003735480.1| - 8.7e-38 130.0 40.6 1.1e-37 129.7 40.6 1.1 1 0 0 1 1 1 1 Permease family GST_N_3 PF13417.6 gi|300709667|ref|YP_003735481.1| - 1.7e-13 50.7 0.0 1.9e-13 50.6 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 gi|300709667|ref|YP_003735481.1| - 5.5e-12 45.7 0.0 7.7e-12 45.3 0.0 1.3 1 1 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 gi|300709667|ref|YP_003735481.1| - 1.7e-09 37.8 0.0 2e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|300709667|ref|YP_003735481.1| - 0.022 15.1 0.0 0.022 15.1 0.0 1.3 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 gi|300709667|ref|YP_003735481.1| - 0.057 13.9 0.0 0.062 13.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin PF00085.20 gi|300709667|ref|YP_003735481.1| - 0.086 12.8 0.0 0.12 12.4 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin GST_N PF02798.20 gi|300709667|ref|YP_003735481.1| - 0.19 12.1 0.0 0.32 11.4 0.0 1.4 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain HTH_3 PF01381.22 gi|300709668|ref|YP_003735482.1| - 2.7e-10 40.1 0.0 4.9e-10 39.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|300709668|ref|YP_003735482.1| - 7.9e-07 29.3 0.0 1.8e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|300709668|ref|YP_003735482.1| - 6.9e-05 22.6 0.0 0.00012 21.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|300709668|ref|YP_003735482.1| - 9e-05 22.4 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|300709668|ref|YP_003735482.1| - 0.00023 20.9 0.5 0.0004 20.1 0.0 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_11 PF08279.12 gi|300709668|ref|YP_003735482.1| - 0.00047 20.0 0.0 0.00099 19.0 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_8 PF02954.19 gi|300709668|ref|YP_003735482.1| - 0.019 14.8 0.1 0.14 12.0 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family Sigma70_r4 PF04545.16 gi|300709668|ref|YP_003735482.1| - 0.032 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_38 PF13936.6 gi|300709668|ref|YP_003735482.1| - 0.063 13.0 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AraC PF00165.23 gi|300709668|ref|YP_003735482.1| - 0.078 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_10 PF04967.12 gi|300709668|ref|YP_003735482.1| - 0.16 11.8 0.0 0.32 10.8 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain DUF1743 PF08489.11 gi|300709669|ref|YP_003735483.1| - 1.9e-39 134.3 0.0 3.3e-39 133.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|300709669|ref|YP_003735483.1| - 0.00012 22.0 0.4 0.00038 20.4 0.1 1.9 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|300709669|ref|YP_003735483.1| - 0.0014 18.8 0.0 0.0028 17.8 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain C1_1 PF00130.22 gi|300709669|ref|YP_003735483.1| - 0.012 15.5 0.5 0.025 14.5 0.2 1.6 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn_Tnp_IS1595 PF12760.7 gi|300709669|ref|YP_003735483.1| - 0.034 14.1 2.4 0.093 12.7 2.4 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|300709669|ref|YP_003735483.1| - 0.047 13.6 1.5 0.087 12.7 1.5 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit DZR PF12773.7 gi|300709669|ref|YP_003735483.1| - 0.065 13.3 1.3 0.13 12.3 1.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|300709669|ref|YP_003735483.1| - 0.096 12.8 1.7 3.2 7.9 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|300709669|ref|YP_003735483.1| - 0.14 12.1 1.7 0.26 11.2 1.7 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.12 gi|300709669|ref|YP_003735483.1| - 0.14 12.2 1.2 0.29 11.2 1.2 1.4 1 0 0 1 1 1 0 zinc-ribbons IBR PF01485.21 gi|300709669|ref|YP_003735483.1| - 0.17 12.1 0.6 0.3 11.3 0.6 1.3 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain HypA PF01155.19 gi|300709669|ref|YP_003735483.1| - 0.32 11.0 0.7 0.59 10.2 0.7 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF456 PF04306.13 gi|300709670|ref|YP_003735484.1| - 0.00055 20.2 0.5 0.00055 20.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF456) DUF5518 PF17647.1 gi|300709670|ref|YP_003735484.1| - 0.0015 18.6 0.7 0.0021 18.2 0.7 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5518) DUF21 PF01595.20 gi|300709670|ref|YP_003735484.1| - 0.003 17.3 0.7 0.0041 16.9 0.7 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain DUF3792 PF12670.7 gi|300709670|ref|YP_003735484.1| - 0.0056 16.8 1.1 0.0087 16.2 1.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3792) Prominin PF05478.11 gi|300709670|ref|YP_003735484.1| - 0.015 13.3 1.1 0.019 13.0 1.1 1.1 1 0 0 1 1 1 0 Prominin DUF4064 PF13273.6 gi|300709670|ref|YP_003735484.1| - 0.02 15.2 3.8 0.03 14.6 2.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) SUR7 PF06687.12 gi|300709670|ref|YP_003735484.1| - 0.021 14.5 0.1 0.023 14.3 0.1 1.1 1 0 0 1 1 1 0 SUR7/PalI family OST3_OST6 PF04756.13 gi|300709670|ref|YP_003735484.1| - 0.022 14.1 0.2 0.026 13.9 0.2 1.0 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Sigma_reg_N PF13800.6 gi|300709670|ref|YP_003735484.1| - 0.039 14.2 2.1 3.4 8.0 0.5 2.1 1 1 1 2 2 2 0 Sigma factor regulator N-terminal DUF4281 PF14108.6 gi|300709670|ref|YP_003735484.1| - 0.043 14.2 0.3 0.067 13.6 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4281) Saf_2TM PF18303.1 gi|300709670|ref|YP_003735484.1| - 0.055 13.1 0.8 0.068 12.8 0.3 1.4 1 1 0 1 1 1 0 SAVED-fused 2TM effector domain DctQ PF04290.12 gi|300709670|ref|YP_003735484.1| - 0.1 12.5 3.1 0.13 12.1 3.1 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component SPC25 PF06703.11 gi|300709670|ref|YP_003735484.1| - 0.12 12.1 0.5 0.16 11.8 0.5 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) TMEM192 PF14802.6 gi|300709670|ref|YP_003735484.1| - 0.19 10.8 0.1 0.19 10.8 0.1 1.1 1 0 0 1 1 1 0 TMEM192 family EI24 PF07264.11 gi|300709670|ref|YP_003735484.1| - 0.2 11.9 3.1 0.26 11.5 3.1 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) FtsX PF02687.21 gi|300709670|ref|YP_003735484.1| - 5.8 7.5 8.6 16 6.1 8.6 1.7 1 1 0 1 1 1 0 FtsX-like permease family ABC_tran PF00005.27 gi|300709671|ref|YP_003735485.1| - 1e-26 94.1 0.0 1.7e-26 93.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709671|ref|YP_003735485.1| - 1.9e-11 44.4 0.1 3.8e-07 30.2 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|300709671|ref|YP_003735485.1| - 3.8e-08 33.9 0.1 7.7e-08 33.0 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|300709671|ref|YP_003735485.1| - 0.0016 18.2 0.0 0.0044 16.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|300709671|ref|YP_003735485.1| - 0.026 15.0 0.2 0.049 14.1 0.2 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|300709671|ref|YP_003735485.1| - 0.042 13.8 0.0 0.088 12.7 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_27 PF13514.6 gi|300709671|ref|YP_003735485.1| - 0.069 12.7 0.0 0.23 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|300709671|ref|YP_003735485.1| - 0.085 12.6 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|300709671|ref|YP_003735485.1| - 0.097 12.1 0.0 10 5.5 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC2_membrane_2 PF12679.7 gi|300709672|ref|YP_003735486.1| - 1.5e-46 159.0 11.7 6.1e-46 157.0 11.7 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|300709672|ref|YP_003735486.1| - 6.8e-07 29.1 7.3 6.8e-07 29.1 7.3 1.7 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|300709672|ref|YP_003735486.1| - 2.6e-06 27.5 8.1 3.2e-06 27.2 6.9 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|300709672|ref|YP_003735486.1| - 2e-05 23.9 18.0 2e-05 23.9 18.0 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|300709672|ref|YP_003735486.1| - 0.0002 20.8 17.1 0.0017 17.8 17.1 2.2 1 1 0 1 1 1 1 ABC-2 type transporter TssN PF17555.2 gi|300709672|ref|YP_003735486.1| - 3 7.2 5.5 3.7 6.8 4.3 1.7 2 0 0 2 2 2 0 Type VI secretion system, TssN Nramp PF01566.18 gi|300709674|ref|YP_003735488.1| - 2.6e-33 115.5 28.0 3.7e-33 115.0 28.0 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein PALP PF00291.25 gi|300709675|ref|YP_003735489.1| - 1.5e-60 205.2 3.2 1.7e-60 204.9 3.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF2291 PF10054.9 gi|300709675|ref|YP_003735489.1| - 0.02 14.6 0.6 0.033 13.9 0.6 1.3 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2291) A2L_zn_ribbon PF08792.10 gi|300709675|ref|YP_003735489.1| - 0.24 11.1 0.0 24 4.8 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain AstE_AspA PF04952.14 gi|300709676|ref|YP_003735490.1| - 2.1e-52 178.0 0.0 2.3e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family OmpA_like PF16961.5 gi|300709677|ref|YP_003735491.1| - 0.013 15.1 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 Putative OmpA-OmpF-like porin family Alph_Pro_TM PF09608.10 gi|300709677|ref|YP_003735491.1| - 0.019 14.8 0.3 0.03 14.1 0.3 1.3 1 0 0 1 1 1 0 Putative transmembrane protein (Alph_Pro_TM) FTR1 PF03239.14 gi|300709677|ref|YP_003735491.1| - 0.094 11.9 3.8 0.14 11.3 3.8 1.3 1 0 0 1 1 1 0 Iron permease FTR1 family DUF2371 PF10177.9 gi|300709677|ref|YP_003735491.1| - 0.34 11.1 1.5 0.48 10.6 1.5 1.5 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) Citrate_synt PF00285.21 gi|300709678|ref|YP_003735492.1| - 4e-126 420.9 0.0 4.6e-126 420.7 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain OSR1_C PF12202.8 gi|300709678|ref|YP_003735492.1| - 0.1 12.8 0.1 0.1 12.8 0.1 1.8 2 0 0 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain GGACT PF06094.12 gi|300709679|ref|YP_003735493.1| - 1.8e-13 51.2 0.0 2.2e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 gi|300709679|ref|YP_003735493.1| - 0.00041 20.7 0.0 0.00069 20.0 0.0 1.3 1 0 0 1 1 1 1 AIG2-like family PALP PF00291.25 gi|300709680|ref|YP_003735494.1| - 1.8e-85 286.9 9.1 2.6e-85 286.4 9.1 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.6 gi|300709680|ref|YP_003735494.1| - 5.6e-07 30.1 0.4 4.7e-06 27.1 0.1 2.3 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|300709680|ref|YP_003735494.1| - 0.001 18.8 1.8 0.0019 18.0 0.2 2.2 2 0 0 2 2 2 1 ACT domain DUF3560 PF12083.8 gi|300709680|ref|YP_003735494.1| - 0.034 14.3 0.1 0.35 11.0 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3560) GARS_N PF02844.15 gi|300709680|ref|YP_003735494.1| - 0.091 13.6 0.6 4.1 8.2 0.6 2.8 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain HTH_22 PF13309.6 gi|300709680|ref|YP_003735494.1| - 0.091 12.9 0.0 14 5.8 0.0 2.9 3 0 0 3 3 3 0 HTH domain F420_oxidored PF03807.17 gi|300709680|ref|YP_003735494.1| - 0.098 13.3 4.0 0.96 10.1 1.0 2.8 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent FtsA PF14450.6 gi|300709680|ref|YP_003735494.1| - 0.16 12.4 0.3 0.37 11.2 0.3 1.8 1 1 0 1 1 1 0 Cell division protein FtsA DAGK_cat PF00781.24 gi|300709680|ref|YP_003735494.1| - 0.22 11.1 1.5 2.4 7.8 0.2 2.6 3 0 0 3 3 3 0 Diacylglycerol kinase catalytic domain Ribonuc_L-PSP PF01042.21 gi|300709681|ref|YP_003735495.1| - 2.7e-38 130.7 0.1 3e-38 130.5 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4321 PF14209.6 gi|300709682|ref|YP_003735496.1| - 0.058 13.3 0.1 0.099 12.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4321) GlnD_UR_UTase PF08335.11 gi|300709684|ref|YP_003735498.1| - 0.11 12.6 0.1 0.12 12.4 0.1 1.0 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase PAS_3 PF08447.12 gi|300709685|ref|YP_003735499.1| - 1.9e-42 143.5 2.2 3.2e-21 75.4 0.1 4.1 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|300709685|ref|YP_003735499.1| - 2.3e-32 111.5 9.0 9e-14 51.7 0.1 4.5 4 0 0 4 4 4 4 PAS fold HATPase_c PF02518.26 gi|300709685|ref|YP_003735499.1| - 3e-25 88.9 0.0 8.9e-25 87.4 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|300709685|ref|YP_003735499.1| - 7.8e-23 80.7 0.1 1.6e-07 31.5 0.0 3.8 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|300709685|ref|YP_003735499.1| - 2.4e-19 69.4 0.4 8.1e-08 32.3 0.0 4.1 3 0 0 3 3 3 3 PAS fold HisKA PF00512.25 gi|300709685|ref|YP_003735499.1| - 1.2e-13 50.8 0.6 7e-13 48.4 0.1 2.6 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_11 PF14598.6 gi|300709685|ref|YP_003735499.1| - 7.9e-08 32.4 0.0 0.0093 16.1 0.0 3.4 3 0 0 3 3 3 2 PAS domain HATPase_c_5 PF14501.6 gi|300709685|ref|YP_003735499.1| - 1.4e-05 24.9 0.0 3.2e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 GHKL domain PAS_8 PF13188.7 gi|300709685|ref|YP_003735499.1| - 2.9e-05 24.0 0.7 0.054 13.5 0.1 3.4 3 0 0 3 3 3 2 PAS domain HATPase_c_2 PF13581.6 gi|300709685|ref|YP_003735499.1| - 0.01 15.8 0.1 0.13 12.2 0.0 3.0 2 1 0 2 2 2 0 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|300709685|ref|YP_003735499.1| - 0.028 14.6 0.1 6.9 6.9 0.0 3.3 3 0 0 3 3 3 0 PAS fold HATPase_c_3 PF13589.6 gi|300709685|ref|YP_003735499.1| - 0.11 12.4 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PadR PF03551.14 gi|300709686|ref|YP_003735500.1| - 2.1e-12 46.8 0.3 2.5e-12 46.6 0.3 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|300709686|ref|YP_003735500.1| - 0.0025 17.8 0.1 0.0034 17.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|300709686|ref|YP_003735500.1| - 0.034 14.0 0.0 0.042 13.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) Phosphodiest PF01663.22 gi|300709687|ref|YP_003735501.1| - 1.1e-39 137.0 0.0 3.2e-38 132.3 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 gi|300709687|ref|YP_003735501.1| - 0.0017 17.8 0.0 0.0039 16.6 0.0 1.6 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 gi|300709687|ref|YP_003735501.1| - 0.13 11.7 0.0 6.2 6.1 0.0 2.7 3 0 0 3 3 3 0 Sulfatase PMT_2 PF13231.6 gi|300709689|ref|YP_003735503.1| - 0.0014 18.8 11.8 0.0014 18.8 11.8 4.9 3 2 2 5 5 5 3 Dolichyl-phosphate-mannose-protein mannosyltransferase Polysacc_deac_1 PF01522.21 gi|300709690|ref|YP_003735504.1| - 0.076 12.9 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Polysaccharide deacetylase Hexapep PF00132.24 gi|300709691|ref|YP_003735505.1| - 5.5e-23 79.8 15.4 5.8e-07 29.0 1.0 5.4 4 1 1 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300709691|ref|YP_003735505.1| - 7.5e-12 44.8 5.8 8.5e-05 22.2 0.2 4.2 3 1 1 4 4 4 3 Hexapeptide repeat of succinyl-transferase LpxD PF04613.14 gi|300709691|ref|YP_003735505.1| - 3.1e-09 36.5 0.0 7e-09 35.3 0.0 1.6 2 0 0 2 2 2 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Bactofilin PF04519.13 gi|300709691|ref|YP_003735505.1| - 2.4 8.5 6.1 1.3 9.4 1.4 2.5 2 1 1 3 3 3 0 Polymer-forming cytoskeletal Glycos_transf_2 PF00535.26 gi|300709692|ref|YP_003735506.1| - 2.3e-16 60.1 0.0 3.1e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300709692|ref|YP_003735506.1| - 0.00015 21.7 0.3 0.00035 20.5 0.1 1.8 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|300709692|ref|YP_003735506.1| - 0.0011 19.4 0.0 0.0023 18.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF4282 PF14110.6 gi|300709692|ref|YP_003735506.1| - 0.032 15.0 0.7 0.054 14.2 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) Pectate_lyase_3 PF12708.7 gi|300709693|ref|YP_003735507.1| - 0.0015 18.4 4.8 0.0065 16.3 2.2 2.7 1 1 1 2 2 2 1 Pectate lyase superfamily protein Polysacc_deac_1 PF01522.21 gi|300709694|ref|YP_003735508.1| - 3e-05 23.9 0.0 0.00013 21.9 0.0 1.9 2 0 0 2 2 2 1 Polysaccharide deacetylase HxlR PF01638.17 gi|300709695|ref|YP_003735509.1| - 1.4e-24 85.8 0.0 3e-24 84.7 0.0 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Response_reg PF00072.24 gi|300709695|ref|YP_003735509.1| - 1e-17 64.3 0.1 2.6e-17 63.0 0.1 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HalX PF08663.10 gi|300709695|ref|YP_003735509.1| - 1e-15 57.8 10.1 1e-15 57.8 10.1 3.2 3 1 0 3 3 3 1 HalX domain PadR PF03551.14 gi|300709695|ref|YP_003735509.1| - 0.0017 18.3 0.0 0.0032 17.4 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TFIIA_gamma_N PF02268.16 gi|300709695|ref|YP_003735509.1| - 0.032 14.2 0.6 1.5 8.9 0.0 2.8 3 0 0 3 3 3 0 Transcription initiation factor IIA, gamma subunit, helical domain Pox_A_type_inc PF04508.12 gi|300709695|ref|YP_003735509.1| - 1.4 8.9 4.6 0.93 9.5 1.5 2.3 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat HATPase_c PF02518.26 gi|300709697|ref|YP_003735511.1| - 5e-17 62.4 0.0 9.3e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 gi|300709697|ref|YP_003735511.1| - 4.4e-14 52.6 0.0 1.1e-13 51.3 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c_2 PF13581.6 gi|300709697|ref|YP_003735511.1| - 1.1e-06 28.6 0.2 3.2e-06 27.1 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|300709697|ref|YP_003735511.1| - 3.1e-06 27.0 0.0 7.7e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 gi|300709697|ref|YP_003735511.1| - 0.00075 19.1 0.2 0.0013 18.3 0.2 1.4 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HisKA PF00512.25 gi|300709697|ref|YP_003735511.1| - 0.0012 18.8 1.4 0.0037 17.3 0.1 2.5 2 1 1 3 3 3 1 His Kinase A (phospho-acceptor) domain Glycos_transf_1 PF00534.20 gi|300709698|ref|YP_003735512.1| - 1.3e-30 106.2 0.0 2.2e-30 105.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300709698|ref|YP_003735512.1| - 2.3e-27 96.0 0.0 4.1e-27 95.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300709698|ref|YP_003735512.1| - 2.9e-06 27.4 3.1 2.1e-05 24.6 1.0 2.4 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300709698|ref|YP_003735512.1| - 6e-05 23.5 1.2 6e-05 23.5 1.2 2.3 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|300709698|ref|YP_003735512.1| - 0.016 15.6 0.0 0.046 14.1 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF1616 PF07760.11 gi|300709699|ref|YP_003735513.1| - 1.3e-72 244.7 0.0 1.6e-72 244.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Arrestin_C PF02752.22 gi|300709699|ref|YP_003735513.1| - 0.086 13.3 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain DegT_DnrJ_EryC1 PF01041.17 gi|300709700|ref|YP_003735514.1| - 2.5e-118 395.5 0.2 2.8e-118 395.3 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|300709700|ref|YP_003735514.1| - 1.4e-08 34.3 0.0 6e-08 32.3 0.0 1.9 2 1 0 2 2 2 1 Beta-eliminating lyase GFO_IDH_MocA PF01408.22 gi|300709701|ref|YP_003735515.1| - 1e-24 87.6 0.1 1.9e-24 86.8 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.19 gi|300709701|ref|YP_003735515.1| - 2.5e-06 28.1 0.2 5.6e-06 26.9 0.2 1.5 1 0 0 1 1 1 1 CoA binding domain 2-Hacid_dh_C PF02826.19 gi|300709701|ref|YP_003735515.1| - 0.00044 19.7 0.0 0.0019 17.6 0.0 1.9 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300709701|ref|YP_003735515.1| - 0.00066 20.2 0.1 0.0038 17.8 0.1 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|300709701|ref|YP_003735515.1| - 0.0041 17.3 0.4 0.0079 16.4 0.1 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|300709701|ref|YP_003735515.1| - 0.0074 15.9 0.2 0.013 15.0 0.2 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain DapB_N PF01113.20 gi|300709701|ref|YP_003735515.1| - 0.028 14.5 2.2 0.73 10.0 0.3 3.1 3 1 0 3 3 3 0 Dihydrodipicolinate reductase, N-terminus DUF4851 PF16143.5 gi|300709701|ref|YP_003735515.1| - 0.076 12.5 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4851) DUF2441 PF10386.9 gi|300709701|ref|YP_003735515.1| - 0.098 12.6 0.5 0.2 11.6 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2441) Sacchrp_dh_NADP PF03435.18 gi|300709701|ref|YP_003735515.1| - 0.1 12.9 0.6 4.3 7.6 0.3 3.2 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA_C PF02894.17 gi|300709701|ref|YP_003735515.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain Hexapep PF00132.24 gi|300709702|ref|YP_003735516.1| - 9.6e-25 85.3 13.4 2.6e-07 30.1 0.2 5.1 4 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300709702|ref|YP_003735516.1| - 1.2e-15 57.0 10.7 3.9e-05 23.3 0.4 5.3 5 0 0 5 5 5 5 Hexapeptide repeat of succinyl-transferase UDPG_MGDP_dh_N PF03721.14 gi|300709703|ref|YP_003735517.1| - 1.9e-40 138.5 0.3 3.5e-40 137.6 0.3 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|300709703|ref|YP_003735517.1| - 2.9e-18 65.9 0.0 5.5e-18 65.0 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|300709703|ref|YP_003735517.1| - 5.9e-16 58.8 0.0 1.4e-15 57.6 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|300709703|ref|YP_003735517.1| - 2.8e-07 30.8 2.5 4.8e-06 26.8 0.5 2.8 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|300709703|ref|YP_003735517.1| - 0.0073 15.7 0.1 0.99 8.7 0.0 2.5 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|300709703|ref|YP_003735517.1| - 0.037 14.0 0.4 0.1 12.6 0.1 2.0 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|300709703|ref|YP_003735517.1| - 0.038 13.9 1.4 0.091 12.6 0.2 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|300709703|ref|YP_003735517.1| - 0.52 10.6 3.6 5.7 7.2 0.1 3.4 3 1 0 3 3 3 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|300709704|ref|YP_003735518.1| - 2.6e-36 124.9 0.0 4.2e-36 124.3 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|300709704|ref|YP_003735518.1| - 2.9e-25 88.3 0.0 4.9e-25 87.5 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|300709704|ref|YP_003735518.1| - 1.6e-18 67.1 0.0 6.1e-18 65.2 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_Gly3P_dh_N PF01210.23 gi|300709704|ref|YP_003735518.1| - 2.6e-05 24.2 0.0 0.099 12.6 0.0 3.2 3 0 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|300709704|ref|YP_003735518.1| - 3.5e-05 24.0 0.0 9e-05 22.7 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 gi|300709704|ref|YP_003735518.1| - 0.0062 16.8 0.1 0.086 13.1 0.0 2.6 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|300709704|ref|YP_003735518.1| - 0.02 14.3 0.0 0.15 11.4 0.0 2.3 2 2 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|300709704|ref|YP_003735518.1| - 0.028 14.3 0.1 0.095 12.6 0.0 2.0 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_11 PF14833.6 gi|300709704|ref|YP_003735518.1| - 0.059 13.6 0.2 0.11 12.7 0.2 1.4 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ApbA PF02558.16 gi|300709704|ref|YP_003735518.1| - 0.082 12.6 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Nucleopor_Nup85 PF07575.13 gi|300709704|ref|YP_003735518.1| - 0.084 11.4 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Nup85 Nucleoporin DUF354 PF04007.12 gi|300709705|ref|YP_003735519.1| - 2.1e-21 76.4 0.0 2.7e-21 76.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glycos_transf_1 PF00534.20 gi|300709706|ref|YP_003735520.1| - 2e-11 43.7 0.0 3e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300709706|ref|YP_003735520.1| - 5.3e-10 39.8 0.1 1.2e-09 38.7 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300709706|ref|YP_003735520.1| - 2.4e-09 37.4 0.1 1.2e-08 35.1 0.1 2.1 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300709706|ref|YP_003735520.1| - 1.7e-08 35.1 5.5 2.5e-08 34.5 2.5 2.3 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|300709706|ref|YP_003735520.1| - 0.00066 19.7 0.0 0.0034 17.4 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|300709706|ref|YP_003735520.1| - 0.027 14.9 0.0 0.067 13.6 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 MITF_TFEB_C_3_N PF15951.5 gi|300709707|ref|YP_003735521.1| - 0.019 15.6 0.3 0.091 13.4 0.1 2.0 2 0 0 2 2 2 0 MITF/TFEB/TFEC/TFE3 N-terminus Dot_icm_IcmQ PF09475.10 gi|300709707|ref|YP_003735521.1| - 0.076 12.5 0.0 0.097 12.1 0.0 1.2 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) HTH_20 PF12840.7 gi|300709707|ref|YP_003735521.1| - 0.085 12.9 0.0 2 8.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300709708|ref|YP_003735522.1| - 5.1e-06 26.2 0.0 9.9e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|300709708|ref|YP_003735522.1| - 0.00076 19.0 0.2 0.0013 18.3 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300709708|ref|YP_003735522.1| - 0.0031 17.4 0.1 0.0072 16.2 0.1 1.6 1 0 0 1 1 1 1 MarR family Peptidase_C4 PF00863.19 gi|300709708|ref|YP_003735522.1| - 0.0061 15.9 0.0 0.01 15.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase family C4 HTH_Crp_2 PF13545.6 gi|300709708|ref|YP_003735522.1| - 0.015 15.2 0.4 0.029 14.3 0.4 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|300709708|ref|YP_003735522.1| - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family SIS PF01380.22 gi|300709709|ref|YP_003735523.1| - 4.3e-44 149.5 0.3 5.1e-23 81.4 0.1 3.1 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 gi|300709709|ref|YP_003735523.1| - 1.9e-23 83.1 0.3 1.3e-22 80.4 0.1 2.2 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|300709709|ref|YP_003735523.1| - 1e-20 73.9 0.0 2e-20 72.9 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF4350 PF14258.6 gi|300709709|ref|YP_003735523.1| - 0.02 15.3 2.6 0.18 12.3 0.6 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4350) SIS_2 PF13580.6 gi|300709709|ref|YP_003735523.1| - 0.15 12.1 0.5 8.8 6.4 0.0 2.4 2 0 0 2 2 2 0 SIS domain Asn_synthase PF00733.21 gi|300709710|ref|YP_003735524.1| - 1.3e-06 28.3 0.0 5.9e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Asparagine synthase Polysacc_synt_C PF14667.6 gi|300709712|ref|YP_003735526.1| - 1.1e-14 54.7 12.1 1.1e-14 54.7 12.1 4.7 4 1 1 5 5 5 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|300709712|ref|YP_003735526.1| - 2.9e-14 53.0 11.1 4.9e-14 52.2 11.1 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|300709712|ref|YP_003735526.1| - 4.7e-10 39.3 16.5 4.7e-10 39.3 16.5 2.4 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|300709712|ref|YP_003735526.1| - 3.2e-06 26.0 9.0 3.2e-06 26.0 9.0 1.9 2 1 0 2 2 2 1 Lipid II flippase MurJ NTP_transferase PF00483.23 gi|300709713|ref|YP_003735527.1| - 3.4e-41 141.5 0.0 6.2e-41 140.6 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|300709713|ref|YP_003735527.1| - 1.2e-16 61.4 0.1 1.9e-16 60.8 0.1 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|300709713|ref|YP_003735527.1| - 6.4e-08 32.0 15.2 1e-05 25.1 0.9 4.7 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300709713|ref|YP_003735527.1| - 0.0016 18.1 4.8 0.81 9.5 0.1 3.7 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 gi|300709713|ref|YP_003735527.1| - 0.012 13.8 0.6 0.032 12.4 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) Bactofilin PF04519.13 gi|300709713|ref|YP_003735527.1| - 0.028 14.7 2.8 0.18 12.1 2.8 2.1 1 1 0 1 1 1 0 Polymer-forming cytoskeletal IspD PF01128.19 gi|300709713|ref|YP_003735527.1| - 0.043 13.5 0.1 0.078 12.7 0.1 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PGM_PMM_I PF02878.16 gi|300709714|ref|YP_003735528.1| - 1.4e-31 109.1 0.0 2.9e-31 108.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|300709714|ref|YP_003735528.1| - 7e-22 78.0 1.1 1.9e-21 76.6 0.5 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|300709714|ref|YP_003735528.1| - 4.6e-17 62.3 0.0 9.4e-17 61.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|300709714|ref|YP_003735528.1| - 2.3e-11 43.7 0.4 6.1e-11 42.3 0.4 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Polysacc_deac_1 PF01522.21 gi|300709715|ref|YP_003735529.1| - 1.4e-11 44.4 0.0 2.6e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300709715|ref|YP_003735529.1| - 0.022 14.4 0.0 0.099 12.3 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2334) HalOD1 PF18545.1 gi|300709717|ref|YP_003735531.1| - 1.6e-19 69.9 0.2 2.1e-19 69.5 0.2 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 DUF420 PF04238.12 gi|300709718|ref|YP_003735532.1| - 2.5e-35 121.6 12.5 2.5e-35 121.6 12.5 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF420) DUF2306 PF10067.9 gi|300709718|ref|YP_003735532.1| - 0.0015 18.7 9.3 0.0022 18.2 0.8 2.3 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) 7tm_7 PF08395.12 gi|300709718|ref|YP_003735532.1| - 0.041 13.1 0.4 0.041 13.1 0.4 2.2 2 0 0 2 2 2 0 7tm Chemosensory receptor DUF1240 PF06836.12 gi|300709718|ref|YP_003735532.1| - 0.3 11.6 1.6 0.4 11.2 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1240) OppC_N PF12911.7 gi|300709718|ref|YP_003735532.1| - 0.67 10.0 0.1 0.67 10.0 0.1 2.8 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C BofA PF07441.11 gi|300709719|ref|YP_003735533.1| - 1.1e-08 35.1 16.9 1.1e-08 35.1 16.9 2.1 1 1 1 2 2 2 2 SigmaK-factor processing regulatory protein BofA DEAD PF00270.29 gi|300709721|ref|YP_003735535.1| - 3e-20 72.7 0.0 5.6e-20 71.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|300709721|ref|YP_003735535.1| - 1.8e-13 50.8 0.0 4.3e-13 49.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|300709721|ref|YP_003735535.1| - 5.5e-09 36.3 0.0 9.1e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CitMHS PF03600.16 gi|300709722|ref|YP_003735536.1| - 7.9e-19 68.0 36.7 2.3e-14 53.3 9.1 3.0 1 1 2 3 3 3 3 Citrate transporter NhaB PF06450.12 gi|300709722|ref|YP_003735536.1| - 0.015 14.2 11.5 0.13 11.1 1.9 2.1 2 0 0 2 2 2 0 Bacterial Na+/H+ antiporter B (NhaB) Usp PF00582.26 gi|300709723|ref|YP_003735537.1| - 4.4e-31 108.3 16.9 5e-22 78.9 1.2 2.9 2 1 0 2 2 2 2 Universal stress protein family APS_kinase PF01583.20 gi|300709723|ref|YP_003735537.1| - 0.03 14.2 0.0 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Adenylylsulphate kinase CBS PF00571.28 gi|300709724|ref|YP_003735538.1| - 2e-23 82.6 2.7 1.3e-10 41.5 0.2 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|300709724|ref|YP_003735538.1| - 3.2e-14 52.8 8.1 4.2e-08 32.8 0.6 2.9 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|300709724|ref|YP_003735538.1| - 2.6e-06 27.2 3.6 2.6e-06 27.2 3.6 1.9 1 1 1 2 2 2 1 Peptidase M50B-like DUF3267 PF11667.8 gi|300709724|ref|YP_003735538.1| - 0.00069 19.9 2.0 0.00069 19.9 2.0 2.3 3 0 0 3 3 3 1 Putative zincin peptidase HSP20 PF00011.21 gi|300709725|ref|YP_003735539.1| - 8.7e-16 57.9 0.1 1e-15 57.7 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|300709725|ref|YP_003735539.1| - 2.6e-05 23.7 0.1 0.00045 19.7 0.1 2.2 1 1 0 1 1 1 1 HSP20-like domain found in ArsA UVR PF02151.19 gi|300709726|ref|YP_003735540.1| - 0.037 13.8 0.0 0.046 13.5 0.0 1.1 1 0 0 1 1 1 0 UvrB/uvrC motif UNC-50 PF05216.13 gi|300709726|ref|YP_003735540.1| - 0.13 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 UNC-50 family RHH_1 PF01402.21 gi|300709728|ref|YP_003735542.1| - 5.5e-05 23.0 0.1 5.5e-05 23.0 0.1 2.2 3 1 0 3 3 3 1 Ribbon-helix-helix protein, copG family CopG_antitoxin PF12441.8 gi|300709728|ref|YP_003735542.1| - 0.00079 19.9 0.1 0.0033 17.9 0.0 1.9 2 0 0 2 2 2 1 CopG antitoxin of type II toxin-antitoxin system DUF3562 PF12085.8 gi|300709728|ref|YP_003735542.1| - 0.0014 18.2 0.5 0.0025 17.4 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3562) RasGAP_C PF03836.15 gi|300709728|ref|YP_003735542.1| - 0.01 16.0 0.4 0.017 15.2 0.4 1.3 1 0 0 1 1 1 0 RasGAP C-terminus LXG PF04740.12 gi|300709728|ref|YP_003735542.1| - 0.023 14.4 0.2 0.035 13.8 0.2 1.3 1 0 0 1 1 1 0 LXG domain of WXG superfamily DUF2100 PF09873.9 gi|300709728|ref|YP_003735542.1| - 0.034 14.0 0.6 0.038 13.8 0.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2100) ChaB PF06150.12 gi|300709730|ref|YP_003735544.1| - 3.7 8.2 6.2 3.1 8.5 0.1 3.0 2 1 0 2 2 2 0 ChaB HUN PF08729.10 gi|300709733|ref|YP_003735547.1| - 0.13 12.3 0.0 0.4 10.7 0.0 1.8 2 0 0 2 2 2 0 HPC2 and ubinuclein domain TFX_C PF14601.6 gi|300709734|ref|YP_003735548.1| - 1.7e-30 104.8 0.2 3.1e-30 104.0 0.2 1.4 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term Sigma70_r4 PF04545.16 gi|300709734|ref|YP_003735548.1| - 1.9e-07 30.5 0.4 3.3e-07 29.7 0.4 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|300709734|ref|YP_003735548.1| - 0.00024 20.7 0.0 0.00063 19.4 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_31 PF13560.6 gi|300709734|ref|YP_003735548.1| - 0.00029 21.1 2.5 0.00067 20.0 2.5 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain GerE PF00196.19 gi|300709734|ref|YP_003735548.1| - 0.0012 18.4 0.1 0.0022 17.5 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family MarR_2 PF12802.7 gi|300709734|ref|YP_003735548.1| - 0.0015 18.3 0.3 0.0033 17.3 0.3 1.5 1 0 0 1 1 1 1 MarR family HTH_19 PF12844.7 gi|300709734|ref|YP_003735548.1| - 0.0018 18.3 0.0 0.0034 17.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|300709734|ref|YP_003735548.1| - 0.0055 16.7 0.1 0.012 15.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_Crp_2 PF13545.6 gi|300709734|ref|YP_003735548.1| - 0.013 15.5 0.1 0.024 14.6 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_37 PF13744.6 gi|300709734|ref|YP_003735548.1| - 0.025 14.5 0.1 0.039 13.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain KORA PF16509.5 gi|300709734|ref|YP_003735548.1| - 0.054 13.8 0.1 0.099 12.9 0.1 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_24 PF13412.6 gi|300709734|ref|YP_003735548.1| - 0.11 12.1 0.1 0.2 11.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DNA_pol3_theta PF06440.11 gi|300709734|ref|YP_003735548.1| - 0.12 12.1 0.2 0.23 11.2 0.2 1.5 1 0 0 1 1 1 0 DNA polymerase III, theta subunit HTH_38 PF13936.6 gi|300709734|ref|YP_003735548.1| - 0.14 11.9 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain TRAM PF01938.20 gi|300709735|ref|YP_003735549.1| - 1.4e-07 31.4 0.4 2e-07 30.9 0.4 1.2 1 0 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 gi|300709736|ref|YP_003735550.1| - 3.9e-07 30.6 1.5 0.00015 22.2 0.2 2.5 2 1 0 2 2 2 2 Radical SAM superfamily Fer4_14 PF13394.6 gi|300709736|ref|YP_003735550.1| - 0.0018 18.4 0.0 0.0033 17.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|300709736|ref|YP_003735550.1| - 0.0054 17.0 0.1 0.012 15.9 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain PPR PF01535.20 gi|300709736|ref|YP_003735550.1| - 3.8 8.0 4.8 2.2 8.7 0.1 3.1 4 0 0 4 4 4 0 PPR repeat DUF373 PF04123.13 gi|300709737|ref|YP_003735551.1| - 5.6e-121 404.1 3.9 6.6e-121 403.9 3.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) PNTB PF02233.16 gi|300709737|ref|YP_003735551.1| - 0.018 14.0 3.9 0.034 13.1 3.9 1.4 1 1 0 1 1 1 0 NAD(P) transhydrogenase beta subunit EI24 PF07264.11 gi|300709737|ref|YP_003735551.1| - 0.58 10.4 11.5 29 4.9 11.5 2.1 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Terminase_GpA PF05876.12 gi|300709738|ref|YP_003735552.1| - 0.0003 19.5 0.8 0.00034 19.3 0.8 1.0 1 0 0 1 1 1 1 Phage terminase large subunit (GpA) TF_Zn_Ribbon PF08271.12 gi|300709738|ref|YP_003735552.1| - 0.00065 19.2 0.2 0.00091 18.7 0.2 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|300709738|ref|YP_003735552.1| - 0.00069 18.9 0.2 0.73 9.3 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|300709738|ref|YP_003735552.1| - 0.0017 18.1 0.1 0.0026 17.5 0.1 1.3 1 1 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein C1_4 PF07975.12 gi|300709738|ref|YP_003735552.1| - 0.0055 16.9 0.1 0.0078 16.4 0.1 1.2 1 0 0 1 1 1 1 TFIIH C1-like domain DZR PF12773.7 gi|300709738|ref|YP_003735552.1| - 0.006 16.6 0.2 0.0095 15.9 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-Mss51 PF13824.6 gi|300709738|ref|YP_003735552.1| - 0.044 13.9 0.4 0.067 13.3 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zinc_ribbon_4 PF13717.6 gi|300709738|ref|YP_003735552.1| - 0.067 13.1 0.2 6.7 6.7 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain HscB_4_cys PF18256.1 gi|300709738|ref|YP_003735552.1| - 0.091 12.6 3.2 1.3 8.9 0.4 2.4 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif zf-LITAF-like PF10601.9 gi|300709738|ref|YP_003735552.1| - 0.1 12.9 1.0 1.5 9.2 0.0 2.1 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf_UBZ PF18439.1 gi|300709738|ref|YP_003735552.1| - 0.15 11.7 1.4 9.6 5.9 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-IS66 PF13005.7 gi|300709738|ref|YP_003735552.1| - 0.19 12.2 4.2 3.6 8.1 0.6 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 Zn-ribbon_8 PF09723.10 gi|300709738|ref|YP_003735552.1| - 1.5 9.0 5.1 13 6.0 4.6 2.1 1 1 1 2 2 2 0 Zinc ribbon domain polyprenyl_synt PF00348.17 gi|300709739|ref|YP_003735553.1| - 1.3e-49 168.6 0.0 1.6e-49 168.3 0.0 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF2071 PF09844.9 gi|300709740|ref|YP_003735554.1| - 3.7e-72 242.4 0.1 4.1e-72 242.2 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) ADC PF06314.11 gi|300709740|ref|YP_003735554.1| - 5.4e-05 22.9 0.0 6.4e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) Abhydrolase_1 PF00561.20 gi|300709741|ref|YP_003735555.1| - 7.5e-15 55.3 0.0 5.1e-07 29.6 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300709741|ref|YP_003735555.1| - 1.5e-12 48.6 7.9 2e-12 48.2 7.9 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300709741|ref|YP_003735555.1| - 5.8e-09 35.6 0.0 7.8e-06 25.3 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 gi|300709741|ref|YP_003735555.1| - 0.00059 19.6 0.0 0.0017 18.1 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase family Thioesterase PF00975.20 gi|300709741|ref|YP_003735555.1| - 0.0012 19.0 0.1 0.0019 18.4 0.1 1.3 1 0 0 1 1 1 1 Thioesterase domain Esterase PF00756.20 gi|300709741|ref|YP_003735555.1| - 0.0043 16.7 0.0 0.0062 16.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Esterase_phd PF10503.9 gi|300709741|ref|YP_003735555.1| - 0.022 14.3 0.1 0.046 13.2 0.1 1.5 1 1 0 1 1 1 0 Esterase PHB depolymerase TGS PF02824.21 gi|300709741|ref|YP_003735555.1| - 0.051 13.6 0.0 0.088 12.9 0.0 1.3 1 0 0 1 1 1 0 TGS domain Ndr PF03096.14 gi|300709741|ref|YP_003735555.1| - 0.061 12.0 0.0 0.085 11.5 0.0 1.1 1 0 0 1 1 1 0 Ndr family Abhydrolase_4 PF08386.10 gi|300709741|ref|YP_003735555.1| - 0.068 13.3 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein ETF_alpha PF00766.19 gi|300709742|ref|YP_003735556.1| - 3.7e-37 126.2 0.3 1.1e-36 124.7 0.3 1.8 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|300709742|ref|YP_003735556.1| - 1.5e-31 109.7 3.3 2.8e-31 108.8 3.3 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF PF01012.21 gi|300709743|ref|YP_003735557.1| - 1.7e-39 135.6 3.0 2.2e-39 135.2 3.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain TraK PF06586.11 gi|300709745|ref|YP_003735559.1| - 0.007 16.1 0.6 0.013 15.2 0.0 1.9 2 0 0 2 2 2 1 TraK protein Pilin_N PF07790.11 gi|300709746|ref|YP_003735560.1| - 2.3e-12 47.6 1.1 4.3e-12 46.8 0.8 1.5 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Methyltransf_11 PF08241.12 gi|300709747|ref|YP_003735561.1| - 1.5e-25 89.7 0.0 2.8e-25 88.8 0.0 1.4 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300709747|ref|YP_003735561.1| - 7.3e-23 81.1 0.0 1.2e-22 80.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300709747|ref|YP_003735561.1| - 8.7e-21 74.3 0.0 1.1e-20 74.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300709747|ref|YP_003735561.1| - 3.2e-18 66.1 0.0 4.6e-18 65.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300709747|ref|YP_003735561.1| - 3e-17 62.7 0.0 1.2e-13 51.0 0.0 2.1 1 1 1 2 2 2 2 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|300709747|ref|YP_003735561.1| - 8.1e-15 55.4 0.0 1.2e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|300709747|ref|YP_003735561.1| - 1.6e-06 27.4 0.0 1.9e-06 27.2 0.0 1.2 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.11 gi|300709747|ref|YP_003735561.1| - 7.1e-06 25.2 0.0 9.3e-06 24.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|300709747|ref|YP_003735561.1| - 7.9e-06 25.6 0.0 1.1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|300709747|ref|YP_003735561.1| - 1.4e-05 25.0 0.0 1.7e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|300709747|ref|YP_003735561.1| - 0.0014 18.3 0.0 0.0018 17.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 gi|300709747|ref|YP_003735561.1| - 0.0017 17.0 0.0 0.002 16.7 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_PK PF05891.12 gi|300709747|ref|YP_003735561.1| - 0.0017 17.9 0.0 0.0022 17.5 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase MTS PF05175.14 gi|300709747|ref|YP_003735561.1| - 0.0034 16.9 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|300709747|ref|YP_003735561.1| - 0.004 16.5 0.0 0.0053 16.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Fimbrial_K88 PF02432.15 gi|300709747|ref|YP_003735561.1| - 0.032 14.2 0.1 0.071 13.1 0.0 1.6 2 0 0 2 2 2 0 Fimbrial, major and minor subunit Methyltransf_8 PF05148.15 gi|300709747|ref|YP_003735561.1| - 0.14 12.0 0.0 0.52 10.1 0.0 2.0 1 1 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|300709747|ref|YP_003735561.1| - 0.2 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain V-ATPase_G_2 PF16999.5 gi|300709748|ref|YP_003735562.1| - 0.00023 21.5 27.7 0.00058 20.3 27.7 1.6 1 1 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit V-ATPase_G PF03179.15 gi|300709748|ref|YP_003735562.1| - 0.00063 20.2 18.7 0.00081 19.9 18.7 1.1 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|300709748|ref|YP_003735562.1| - 0.0011 19.0 25.4 0.0022 18.1 25.4 1.6 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) DUF883 PF05957.13 gi|300709748|ref|YP_003735562.1| - 0.048 14.3 17.8 0.13 12.9 9.2 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) HrpE PF06188.12 gi|300709748|ref|YP_003735562.1| - 0.13 12.2 10.8 0.2 11.5 10.8 1.3 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E OmpH PF03938.14 gi|300709748|ref|YP_003735562.1| - 0.13 12.6 9.2 0.15 12.4 9.2 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ApoLp-III PF07464.11 gi|300709748|ref|YP_003735562.1| - 0.24 11.5 4.7 0.29 11.2 4.7 1.0 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF3552 PF12072.8 gi|300709748|ref|YP_003735562.1| - 0.28 10.6 25.1 0.9 8.9 16.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Phage_Mu_Gam PF07352.12 gi|300709748|ref|YP_003735562.1| - 0.44 10.4 15.3 1.9 8.4 1.0 2.0 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Caudo_TAP PF02413.17 gi|300709748|ref|YP_003735562.1| - 0.82 9.8 9.7 0.55 10.4 7.2 1.8 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK DivIVA PF05103.13 gi|300709748|ref|YP_003735562.1| - 0.91 9.6 15.9 0.28 11.3 12.1 1.9 1 1 1 2 2 2 0 DivIVA protein DUF3435 PF11917.8 gi|300709748|ref|YP_003735562.1| - 1.6 7.6 7.9 1.7 7.4 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Atg14 PF10186.9 gi|300709748|ref|YP_003735562.1| - 1.8 7.5 5.4 2.1 7.4 5.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3987 PF13148.6 gi|300709748|ref|YP_003735562.1| - 2.9 6.8 13.4 3.5 6.5 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) AAA_11 PF13086.6 gi|300709748|ref|YP_003735562.1| - 5 6.8 7.6 5.3 6.7 7.6 1.0 1 0 0 1 1 1 0 AAA domain DUF2309 PF10070.9 gi|300709748|ref|YP_003735562.1| - 5.3 5.2 10.2 4.1 5.6 9.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) V_ATPase_I PF01496.19 gi|300709749|ref|YP_003735563.1| - 1.4e-15 56.4 12.9 1.4e-07 29.9 4.6 4.0 4 1 0 4 4 4 3 V-type ATPase 116kDa subunit family DUF4140 PF13600.6 gi|300709749|ref|YP_003735563.1| - 0.23 11.9 2.6 8 7.0 0.5 2.3 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) bZIP_1 PF00170.21 gi|300709749|ref|YP_003735563.1| - 0.45 10.6 1.0 4 7.6 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor ATP-synt_C PF00137.21 gi|300709750|ref|YP_003735564.1| - 7.8e-12 45.4 10.0 7.8e-12 45.4 10.0 1.5 2 0 0 2 2 2 1 ATP synthase subunit C vATP-synt_E PF01991.18 gi|300709751|ref|YP_003735565.1| - 1.3e-37 129.2 15.8 1.5e-37 128.9 15.8 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit HTH_19 PF12844.7 gi|300709751|ref|YP_003735565.1| - 0.014 15.4 1.6 0.037 14.1 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Mt_ATP-synt_B PF05405.14 gi|300709751|ref|YP_003735565.1| - 0.35 10.5 7.5 0.65 9.6 7.5 1.5 1 1 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DivIVA PF05103.13 gi|300709751|ref|YP_003735565.1| - 1.3 9.1 19.7 0.16 12.1 14.3 2.2 1 1 1 2 2 2 0 DivIVA protein T4_Rnl2_C PF18043.1 gi|300709751|ref|YP_003735565.1| - 9.8 6.4 9.8 8.8 6.5 0.1 3.8 2 1 2 4 4 4 0 T4 RNA ligase 2 C-terminal vATP-synt_AC39 PF01992.16 gi|300709752|ref|YP_003735566.1| - 1.1e-80 271.6 6.8 1.3e-80 271.5 6.8 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit Mg_chelatase_C PF13335.6 gi|300709752|ref|YP_003735566.1| - 0.0049 17.5 0.0 5.8 7.6 0.0 2.8 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI C-terminal ATP-synt_F PF01990.17 gi|300709753|ref|YP_003735567.1| - 1.3e-13 51.1 0.0 1.5e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit ATP-synt_ab PF00006.25 gi|300709754|ref|YP_003735568.1| - 7.6e-90 300.2 0.0 1.1e-89 299.7 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|300709754|ref|YP_003735568.1| - 3e-39 133.6 0.0 5.1e-39 132.9 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|300709754|ref|YP_003735568.1| - 9.3e-13 48.5 3.2 9.3e-13 48.5 3.2 2.1 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain Peptidase_M23 PF01551.22 gi|300709754|ref|YP_003735568.1| - 0.012 15.8 0.0 2.6 8.3 0.0 2.6 2 0 0 2 2 2 0 Peptidase family M23 ATP-synt_ab PF00006.25 gi|300709755|ref|YP_003735569.1| - 3e-63 213.3 0.0 6.1e-63 212.3 0.0 1.5 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|300709755|ref|YP_003735569.1| - 3e-13 50.1 0.8 6.6e-13 49.0 0.8 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|300709755|ref|YP_003735569.1| - 0.046 13.9 0.6 0.046 13.9 0.6 2.2 2 0 0 2 2 2 0 HAS barrel domain EamA PF00892.20 gi|300709756|ref|YP_003735570.1| - 9.4e-41 139.2 33.4 3.4e-21 75.9 11.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family RseC_MucC PF04246.12 gi|300709756|ref|YP_003735570.1| - 0.12 12.4 0.2 0.12 12.4 0.2 3.7 2 1 1 3 3 3 0 Positive regulator of sigma(E), RseC/MucC TMEM234 PF10639.9 gi|300709756|ref|YP_003735570.1| - 1.5 8.9 5.2 13 5.8 1.0 2.4 2 0 0 2 2 2 0 Putative transmembrane family 234 HTH_5 PF01022.20 gi|300709757|ref|YP_003735571.1| - 1.2e-05 25.1 0.0 2.1e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|300709757|ref|YP_003735571.1| - 2.2e-05 24.2 0.3 6.6e-05 22.7 0.3 1.8 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|300709757|ref|YP_003735571.1| - 2.4e-05 24.2 0.1 5.5e-05 23.1 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF1724 PF08350.10 gi|300709757|ref|YP_003735571.1| - 0.0002 21.4 0.0 0.0003 20.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_IclR PF09339.10 gi|300709757|ref|YP_003735571.1| - 0.00034 20.3 0.2 0.00034 20.3 0.2 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|300709757|ref|YP_003735571.1| - 0.00036 20.5 0.8 0.0018 18.3 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|300709757|ref|YP_003735571.1| - 0.00077 19.3 0.0 0.0013 18.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|300709757|ref|YP_003735571.1| - 0.0043 16.6 0.7 0.0084 15.7 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HxlR PF01638.17 gi|300709757|ref|YP_003735571.1| - 0.0088 15.9 0.1 0.22 11.4 0.0 2.5 2 1 0 2 2 2 1 HxlR-like helix-turn-helix HTH_29 PF13551.6 gi|300709757|ref|YP_003735571.1| - 0.051 13.6 0.2 0.13 12.3 0.2 1.7 1 0 0 1 1 1 0 Winged helix-turn helix TrmB PF01978.19 gi|300709757|ref|YP_003735571.1| - 0.058 13.3 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Trp_repressor PF01371.19 gi|300709757|ref|YP_003735571.1| - 0.075 13.2 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Trp repressor protein HTH_23 PF13384.6 gi|300709757|ref|YP_003735571.1| - 0.076 12.8 0.1 0.27 11.1 0.1 2.0 1 1 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 gi|300709757|ref|YP_003735571.1| - 0.1 12.7 1.1 0.2 11.8 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HemN_C PF06969.16 gi|300709757|ref|YP_003735571.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.7 1 0 0 1 1 1 0 HemN C-terminal domain ATP-synt_D PF01813.17 gi|300709758|ref|YP_003735572.1| - 2.7e-54 184.0 7.2 3.2e-54 183.7 7.2 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF948 PF06103.11 gi|300709758|ref|YP_003735572.1| - 0.1 12.8 1.1 4.6 7.6 0.1 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) RNA_POL_M_15KD PF02150.16 gi|300709759|ref|YP_003735573.1| - 0.21 11.5 1.2 1.4 8.9 0.1 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit eRF1_2 PF03464.15 gi|300709760|ref|YP_003735574.1| - 2e-43 147.9 0.0 3.5e-43 147.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|300709760|ref|YP_003735574.1| - 3.1e-27 95.3 0.1 8.4e-27 93.9 0.1 1.8 1 0 0 1 1 1 1 eRF1 domain 3 acVLRF1 PF18859.1 gi|300709760|ref|YP_003735574.1| - 6.3e-19 68.6 0.3 1.8e-18 67.0 0.3 1.8 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|300709760|ref|YP_003735574.1| - 8.8e-16 58.4 0.3 2.8e-15 56.8 0.1 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|300709760|ref|YP_003735574.1| - 2.6e-11 43.6 0.0 3.9e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 1 baeRF_family12 PF18856.1 gi|300709760|ref|YP_003735574.1| - 0.02 15.5 0.0 0.094 13.3 0.0 2.1 1 1 1 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 12 tRNA-synt_1d PF00750.19 gi|300709761|ref|YP_003735575.1| - 1.6e-37 129.3 0.0 2.2e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|300709761|ref|YP_003735575.1| - 1.4e-32 112.4 0.0 4.8e-32 110.6 0.0 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|300709761|ref|YP_003735575.1| - 6.1e-06 26.7 0.0 1.4e-05 25.6 0.0 1.7 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1g PF09334.11 gi|300709761|ref|YP_003735575.1| - 0.079 11.7 0.0 5.5 5.6 0.0 2.7 2 1 1 3 3 3 0 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|300709761|ref|YP_003735575.1| - 0.09 11.7 0.0 0.35 9.7 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (K) MaoC_dehydratas PF01575.19 gi|300709763|ref|YP_003735577.1| - 1.6e-18 66.4 0.0 2.6e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|300709763|ref|YP_003735577.1| - 1.3e-06 28.6 0.0 2.7e-06 27.5 0.0 1.6 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Wyosine_form PF08608.12 gi|300709764|ref|YP_003735578.1| - 1.3e-20 73.5 0.2 7.3e-20 71.1 0.1 2.3 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.21 gi|300709764|ref|YP_003735578.1| - 2.2e-20 73.7 0.2 7e-20 72.1 0.2 1.8 1 1 0 1 1 1 1 Radical SAM superfamily AP_endonuc_2 PF01261.24 gi|300709764|ref|YP_003735578.1| - 0.0024 17.3 0.1 0.0031 17.0 0.1 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel CTP-dep_RFKase PF01982.16 gi|300709765|ref|YP_003735579.1| - 2.3e-46 156.8 0.0 3.3e-46 156.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_20 PF12840.7 gi|300709765|ref|YP_003735579.1| - 6.3e-10 39.0 0.2 1.2e-09 38.1 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|300709765|ref|YP_003735579.1| - 2.5e-06 26.9 0.0 5.4e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300709765|ref|YP_003735579.1| - 1e-05 25.3 0.3 2e-05 24.4 0.3 1.5 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.6 gi|300709765|ref|YP_003735579.1| - 5.4e-05 22.9 3.1 0.00039 20.2 0.5 2.5 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|300709765|ref|YP_003735579.1| - 0.00013 21.9 0.0 0.00026 20.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|300709765|ref|YP_003735579.1| - 0.00052 20.4 0.0 0.00089 19.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|300709765|ref|YP_003735579.1| - 0.0016 18.3 0.1 0.0034 17.3 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 gi|300709765|ref|YP_003735579.1| - 0.004 17.1 0.1 0.0083 16.1 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_DeoR PF08220.12 gi|300709765|ref|YP_003735579.1| - 0.0049 16.6 0.0 0.01 15.5 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF3363 PF11843.8 gi|300709765|ref|YP_003735579.1| - 0.021 13.8 0.0 0.027 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3363) HTH_34 PF13601.6 gi|300709765|ref|YP_003735579.1| - 0.046 13.9 0.0 0.074 13.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_1 PF00126.27 gi|300709765|ref|YP_003735579.1| - 0.049 13.6 0.1 0.1 12.6 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_IclR PF09339.10 gi|300709765|ref|YP_003735579.1| - 0.055 13.3 0.3 0.099 12.5 0.3 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain GntR PF00392.21 gi|300709765|ref|YP_003735579.1| - 0.087 12.5 0.1 0.22 11.2 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|300709765|ref|YP_003735579.1| - 0.19 12.1 0.0 0.31 11.4 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator DHBP_synthase PF00926.19 gi|300709766|ref|YP_003735580.1| - 1.3e-60 204.2 0.0 1.6e-60 203.9 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|300709766|ref|YP_003735580.1| - 0.087 12.6 0.2 0.41 10.4 0.1 2.1 2 1 0 2 2 2 0 PEP-utilising enzyme, mobile domain Aminotran_4 PF01063.19 gi|300709767|ref|YP_003735581.1| - 2.6e-49 168.1 0.0 3.1e-49 167.8 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV TatC PF00902.18 gi|300709768|ref|YP_003735582.1| - 5.3e-42 144.0 17.8 6.4e-42 143.7 17.8 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) SUR7 PF06687.12 gi|300709768|ref|YP_003735582.1| - 0.4 10.3 6.3 0.87 9.2 6.3 1.7 1 1 0 1 1 1 0 SUR7/PalI family TatC PF00902.18 gi|300709769|ref|YP_003735583.1| - 3.7e-67 226.2 48.6 1.4e-37 129.6 16.5 2.9 3 0 0 3 3 3 2 Sec-independent protein translocase protein (TatC) DUF4397 PF14344.6 gi|300709770|ref|YP_003735584.1| - 9.6e-30 103.8 0.1 2.1e-26 93.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4397) RHH_1 PF01402.21 gi|300709771|ref|YP_003735585.1| - 5.5e-05 23.0 2.5 7.3e-05 22.6 0.2 2.1 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|300709771|ref|YP_003735585.1| - 0.055 13.7 0.0 0.057 13.6 0.0 1.1 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Vut_1 PF02592.15 gi|300709772|ref|YP_003735586.1| - 1.4e-49 168.2 1.1 1.4e-49 168.2 1.1 2.0 2 0 0 2 2 2 1 Putative vitamin uptake transporter FtsJ PF01728.19 gi|300709773|ref|YP_003735587.1| - 6e-55 186.1 0.0 7.4e-55 185.8 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRAM PF01938.20 gi|300709773|ref|YP_003735587.1| - 8.3e-12 44.9 0.4 1.5e-11 44.1 0.4 1.5 1 0 0 1 1 1 1 TRAM domain Methyltransf_23 PF13489.6 gi|300709773|ref|YP_003735587.1| - 6e-05 22.9 0.0 0.00027 20.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300709773|ref|YP_003735587.1| - 0.0029 18.3 0.2 0.013 16.1 0.2 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300709773|ref|YP_003735587.1| - 0.034 14.0 0.0 0.47 10.2 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|300709773|ref|YP_003735587.1| - 0.074 12.4 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PCNA_N PF00705.18 gi|300709774|ref|YP_003735588.1| - 1.7e-09 37.5 0.5 2.5e-09 36.9 0.1 1.5 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|300709774|ref|YP_003735588.1| - 1.3e-07 31.8 0.0 1.4e-06 28.5 0.0 2.5 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|300709774|ref|YP_003735588.1| - 0.14 11.6 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Rad9 DUF1516 PF07457.11 gi|300709775|ref|YP_003735589.1| - 0.44 10.8 7.8 1.7 8.9 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1516) Fer2 PF00111.27 gi|300709776|ref|YP_003735590.1| - 1e-16 60.6 0.1 1e-16 60.6 0.1 1.4 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain SBP56 PF05694.11 gi|300709777|ref|YP_003735591.1| - 1.3e-189 630.8 0.1 2.6e-189 629.7 0.1 1.4 1 1 0 1 1 1 1 56kDa selenium binding protein (SBP56) Lactonase PF10282.9 gi|300709777|ref|YP_003735591.1| - 0.23 10.7 0.0 0.59 9.3 0.0 1.7 2 0 0 2 2 2 0 Lactonase, 7-bladed beta-propeller Beta_propel PF09826.9 gi|300709777|ref|YP_003735591.1| - 0.3 9.9 0.0 0.69 8.7 0.0 1.5 2 0 0 2 2 2 0 Beta propeller domain Acetyltransf_10 PF13673.7 gi|300709778|ref|YP_003735592.1| - 1.3e-06 28.3 0.0 1.5e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300709778|ref|YP_003735592.1| - 0.0002 21.6 0.0 0.00027 21.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300709778|ref|YP_003735592.1| - 0.0012 19.2 0.0 0.0017 18.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DNA_primase_lrg PF04104.14 gi|300709779|ref|YP_003735593.1| - 1.9e-33 116.0 0.0 4.2e-33 114.9 0.0 1.5 2 0 0 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit TRIF-NTD PF17798.1 gi|300709779|ref|YP_003735593.1| - 0.012 15.7 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 TRIF N-terminal domain SWIM PF04434.17 gi|300709781|ref|YP_003735595.1| - 4e-05 23.2 0.1 7.2e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 SWIM zinc finger Elf1 PF05129.13 gi|300709781|ref|YP_003735595.1| - 0.044 13.8 0.1 0.071 13.2 0.1 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Hjc PF01870.18 gi|300709782|ref|YP_003735596.1| - 2.4e-31 107.6 0.0 4.3e-31 106.8 0.0 1.4 2 0 0 2 2 2 1 Archaeal holliday junction resolvase (hjc) Glyco_hydro_3 PF00933.21 gi|300709783|ref|YP_003735597.1| - 1.6e-65 221.6 0.0 2e-65 221.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Glyco_hydro_3_C PF01915.22 gi|300709783|ref|YP_003735597.1| - 7.8e-37 127.2 0.0 1.6e-36 126.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 gi|300709783|ref|YP_003735597.1| - 2.9e-13 49.7 0.1 5.8e-13 48.7 0.1 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain TAT_signal PF10518.9 gi|300709783|ref|YP_003735597.1| - 4.9e-05 23.0 6.2 0.00016 21.4 6.2 1.9 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 gi|300709783|ref|YP_003735597.1| - 0.15 11.5 2.5 0.38 10.1 2.5 1.7 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AdoHcyase PF05221.17 gi|300709784|ref|YP_003735598.1| - 5.3e-51 173.5 0.0 3.2e-25 88.9 0.1 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|300709784|ref|YP_003735598.1| - 1.1e-46 158.9 0.7 2.6e-46 157.6 0.3 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|300709784|ref|YP_003735598.1| - 1.2e-08 34.5 0.1 2.2e-08 33.7 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|300709784|ref|YP_003735598.1| - 2.6e-05 23.8 0.1 5.6e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|300709784|ref|YP_003735598.1| - 0.042 14.1 0.1 0.11 12.8 0.1 1.7 1 0 0 1 1 1 0 TrkA-N domain Na_H_Exchanger PF00999.21 gi|300709786|ref|YP_003735600.1| - 1.7e-07 30.4 7.2 1.9e-07 30.2 7.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Na_H_Exchanger PF00999.21 gi|300709787|ref|YP_003735601.1| - 1.2e-33 116.5 30.1 1.4e-33 116.2 30.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF3784 PF12650.7 gi|300709788|ref|YP_003735602.1| - 0.003 17.7 0.6 0.0031 17.7 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3784) PsbL PF02419.17 gi|300709788|ref|YP_003735602.1| - 0.16 11.9 0.3 0.3 11.1 0.3 1.4 1 0 0 1 1 1 0 PsbL protein Amidohydro_1 PF01979.20 gi|300709789|ref|YP_003735603.1| - 3.1e-69 233.9 4.2 3.6e-69 233.7 4.2 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|300709789|ref|YP_003735603.1| - 2.9e-23 83.1 14.1 2.3e-19 70.2 7.8 2.8 1 1 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|300709789|ref|YP_003735603.1| - 0.0029 17.0 0.0 0.0063 15.9 0.0 1.5 2 0 0 2 2 2 1 Adenosine/AMP deaminase TatD_DNase PF01026.21 gi|300709789|ref|YP_003735603.1| - 0.13 11.6 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase Radical_SAM PF04055.21 gi|300709789|ref|YP_003735603.1| - 0.32 11.3 1.1 1.5 9.2 0.3 2.4 2 1 0 2 2 2 0 Radical SAM superfamily HisG PF01634.18 gi|300709790|ref|YP_003735604.1| - 2.9e-50 170.3 0.1 4.1e-50 169.9 0.1 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|300709790|ref|YP_003735604.1| - 6.1e-27 93.6 0.0 1.4e-26 92.4 0.0 1.7 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|300709790|ref|YP_003735604.1| - 0.00039 20.4 0.0 0.00066 19.7 0.0 1.4 1 0 0 1 1 1 1 NMT1/THI5 like CPBP PF02517.16 gi|300709791|ref|YP_003735605.1| - 1.4e-13 51.0 4.2 1.4e-13 51.0 4.2 2.8 3 1 0 3 3 3 1 CPBP intramembrane metalloprotease CrgA PF06781.12 gi|300709791|ref|YP_003735605.1| - 4.5 7.4 10.3 13 5.9 0.1 3.8 3 1 1 4 4 4 0 Cell division protein CrgA SPC12 PF06645.13 gi|300709792|ref|YP_003735606.1| - 1.2 9.3 4.8 0.36 10.9 0.3 2.3 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) TBP PF00352.21 gi|300709793|ref|YP_003735607.1| - 5.8e-57 189.6 0.0 1.1e-27 95.8 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) T4bSS_IcmS PF12608.8 gi|300709793|ref|YP_003735607.1| - 6.4e-05 23.2 0.0 0.015 15.6 0.0 2.2 2 0 0 2 2 2 2 Type IVb secretion, IcmS, effector-recruitment DUF3378 PF11858.8 gi|300709793|ref|YP_003735607.1| - 0.00031 20.8 0.0 0.84 9.8 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) EB1 PF03271.17 gi|300709793|ref|YP_003735607.1| - 0.069 13.4 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 EB1-like C-terminal motif DUF192 PF02643.15 gi|300709793|ref|YP_003735607.1| - 0.15 12.2 0.0 0.62 10.3 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized ACR, COG1430 UPF0020 PF01170.18 gi|300709794|ref|YP_003735608.1| - 4e-24 85.4 0.0 1.9e-23 83.2 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|300709794|ref|YP_003735608.1| - 1e-08 35.8 0.0 3.7e-08 34.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain THUMP PF02926.17 gi|300709794|ref|YP_003735608.1| - 1.1e-07 32.0 0.0 1.7e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 THUMP domain Methyltransf_11 PF08241.12 gi|300709794|ref|YP_003735608.1| - 1.6e-06 28.6 0.0 3.5e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|300709794|ref|YP_003735608.1| - 0.00036 20.2 0.0 0.00059 19.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 AviRa PF11599.8 gi|300709794|ref|YP_003735608.1| - 0.00099 18.6 0.0 0.26 10.7 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa Methyltransf_31 PF13847.6 gi|300709794|ref|YP_003735608.1| - 0.0028 17.4 0.0 0.0044 16.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|300709794|ref|YP_003735608.1| - 0.0034 17.0 0.0 0.0045 16.6 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_Mtase PF02384.16 gi|300709794|ref|YP_003735608.1| - 0.037 13.3 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 N-6 DNA Methylase N6_N4_Mtase PF01555.18 gi|300709794|ref|YP_003735608.1| - 0.13 12.0 0.0 0.28 10.9 0.0 1.5 2 0 0 2 2 2 0 DNA methylase Ubie_methyltran PF01209.18 gi|300709794|ref|YP_003735608.1| - 0.25 10.6 0.0 0.38 10.0 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family 4HBT PF03061.22 gi|300709795|ref|YP_003735609.1| - 4.8e-17 62.1 0.1 7.5e-17 61.5 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily bMG6 PF17962.1 gi|300709795|ref|YP_003735609.1| - 0.081 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial macroglobulin domain 6 SCFA_trans PF02667.14 gi|300709796|ref|YP_003735610.1| - 3.2e-35 122.0 19.4 2e-34 119.4 19.4 1.8 1 1 0 1 1 1 1 Short chain fatty acid transporter SCFA_trans PF02667.14 gi|300709797|ref|YP_003735611.1| - 4e-106 355.7 22.0 4.6e-106 355.5 22.0 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter Na_H_antiport_2 PF13726.6 gi|300709797|ref|YP_003735611.1| - 0.0011 19.1 1.3 0.0011 19.1 1.3 3.0 2 0 0 2 2 2 1 Na+-H+ antiporter family Rep_fac_C PF08542.11 gi|300709798|ref|YP_003735612.1| - 5.9e-11 42.6 0.0 1.4e-10 41.5 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|300709798|ref|YP_003735612.1| - 1.3e-09 38.6 0.0 2.7e-09 37.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|300709798|ref|YP_003735612.1| - 9.8e-09 35.2 0.0 1.8e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_22 PF13401.6 gi|300709798|ref|YP_003735612.1| - 5.7e-06 26.6 0.0 1.3e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300709798|ref|YP_003735612.1| - 2e-05 25.1 0.3 0.00014 22.3 0.1 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|300709798|ref|YP_003735612.1| - 8.1e-05 22.7 0.0 0.00025 21.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|300709798|ref|YP_003735612.1| - 0.00019 21.2 0.0 0.0027 17.4 0.0 2.3 3 0 0 3 3 3 1 Sigma-54 interaction domain DUF815 PF05673.13 gi|300709798|ref|YP_003735612.1| - 0.0005 19.3 0.0 0.0012 18.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_assoc_2 PF16193.5 gi|300709798|ref|YP_003735612.1| - 0.0064 16.8 0.6 0.043 14.2 0.5 2.3 1 1 0 1 1 1 1 AAA C-terminal domain Zeta_toxin PF06414.12 gi|300709798|ref|YP_003735612.1| - 0.0079 15.5 0.0 0.043 13.1 0.0 2.1 3 0 0 3 3 3 1 Zeta toxin AAA_24 PF13479.6 gi|300709798|ref|YP_003735612.1| - 0.015 15.0 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|300709798|ref|YP_003735612.1| - 0.035 14.6 0.0 0.1 13.1 0.0 1.8 2 2 0 2 2 2 0 ABC transporter AAA_18 PF13238.6 gi|300709798|ref|YP_003735612.1| - 0.035 14.6 0.0 0.21 12.2 0.0 2.1 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|300709798|ref|YP_003735612.1| - 0.036 13.8 0.0 0.3 10.8 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein ATPase_2 PF01637.18 gi|300709798|ref|YP_003735612.1| - 0.061 13.2 0.0 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|300709798|ref|YP_003735612.1| - 0.076 12.9 0.0 0.18 11.7 0.0 1.7 1 1 0 1 1 1 0 NACHT domain TsaE PF02367.17 gi|300709798|ref|YP_003735612.1| - 0.078 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF5329 PF17263.2 gi|300709798|ref|YP_003735612.1| - 0.088 13.0 0.0 0.23 11.7 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5329) Bac_DnaA PF00308.18 gi|300709798|ref|YP_003735612.1| - 0.16 11.8 0.0 13 5.6 0.0 2.3 2 0 0 2 2 2 0 Bacterial dnaA protein KAP_NTPase PF07693.14 gi|300709798|ref|YP_003735612.1| - 0.17 11.1 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain Nudix_N_2 PF14803.6 gi|300709799|ref|YP_003735613.1| - 0.017 15.0 0.1 0.017 15.0 0.1 1.6 2 0 0 2 2 2 0 Nudix N-terminal DUF3806 PF12713.7 gi|300709799|ref|YP_003735613.1| - 0.036 13.8 0.1 0.042 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) zf-SNAP50_C PF12251.8 gi|300709799|ref|YP_003735613.1| - 0.057 13.1 0.1 0.066 12.9 0.1 1.0 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal TrmB PF01978.19 gi|300709800|ref|YP_003735614.1| - 2.3e-19 69.1 0.1 4.2e-19 68.2 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|300709800|ref|YP_003735614.1| - 0.011 15.7 0.0 0.026 14.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Regulator_TrmB PF11495.8 gi|300709800|ref|YP_003735614.1| - 0.038 13.2 0.1 0.12 11.6 0.1 1.9 1 1 1 2 2 2 0 Archaeal transcriptional regulator TrmB Use1 PF09753.9 gi|300709800|ref|YP_003735614.1| - 0.074 12.8 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Membrane fusion protein Use1 HTH_9 PF08221.11 gi|300709800|ref|YP_003735614.1| - 0.09 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Vir_act_alpha_C PF10400.9 gi|300709800|ref|YP_003735614.1| - 0.14 12.8 2.0 0.42 11.3 2.0 1.8 1 1 0 1 1 1 0 Virulence activator alpha C-term Glyco_transf_5 PF08323.11 gi|300709800|ref|YP_003735614.1| - 0.21 11.2 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Starch synthase catalytic domain Thioredox_DsbH PF03190.15 gi|300709801|ref|YP_003735615.1| - 6.4e-15 55.5 0.0 1.1e-14 54.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|300709801|ref|YP_003735615.1| - 7.5e-12 45.3 0.0 1.3e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|300709801|ref|YP_003735615.1| - 4e-06 26.8 0.0 6.3e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|300709801|ref|YP_003735615.1| - 6.7e-05 23.3 0.0 0.00015 22.2 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|300709801|ref|YP_003735615.1| - 0.1 12.9 0.0 1.5 9.2 0.0 2.1 1 1 1 2 2 2 0 Thioredoxin-like Glyco_hydro_127 PF07944.12 gi|300709801|ref|YP_003735615.1| - 0.39 9.1 0.8 5.7 5.3 0.0 2.4 1 1 1 2 2 2 0 Beta-L-arabinofuranosidase, GH127 FxsA PF04186.13 gi|300709803|ref|YP_003735617.1| - 1.6e-32 111.9 6.8 1.9e-32 111.6 6.8 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DUF2062 PF09835.9 gi|300709803|ref|YP_003735617.1| - 0.064 13.1 1.6 0.086 12.7 1.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Peptidase_C15 PF01470.17 gi|300709804|ref|YP_003735618.1| - 1.3e-48 165.9 0.0 1.5e-48 165.7 0.0 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase DUF1328 PF07043.13 gi|300709805|ref|YP_003735619.1| - 6.6e-11 42.2 20.6 8.6e-11 41.9 20.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) DUF2973 PF11189.8 gi|300709805|ref|YP_003735619.1| - 0.12 12.5 0.4 0.12 12.5 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2973) Creatininase PF02633.14 gi|300709806|ref|YP_003735620.1| - 1.1e-67 228.1 0.5 1.2e-67 227.9 0.5 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase Glyco_hydro_65C PF03633.15 gi|300709807|ref|YP_003735621.1| - 0.056 13.4 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain DUF2850 PF11012.8 gi|300709807|ref|YP_003735621.1| - 0.13 12.6 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2850) Methyltransf_25 PF13649.6 gi|300709808|ref|YP_003735622.1| - 3.2e-12 47.0 0.1 5.9e-12 46.1 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300709808|ref|YP_003735622.1| - 7e-11 42.6 0.1 1.2e-10 41.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300709808|ref|YP_003735622.1| - 5.8e-08 32.7 0.0 8.9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|300709808|ref|YP_003735622.1| - 1.4e-07 31.3 0.0 1.8e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 gi|300709808|ref|YP_003735622.1| - 8.6e-07 28.9 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300709808|ref|YP_003735622.1| - 6.6e-06 26.8 0.1 1.1e-05 26.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|300709808|ref|YP_003735622.1| - 0.0082 17.2 0.2 0.015 16.4 0.2 1.5 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|300709808|ref|YP_003735622.1| - 0.01 15.2 0.1 0.062 12.7 0.0 1.9 2 0 0 2 2 2 0 Tellurite resistance protein TehB Biotin_lipoyl PF00364.22 gi|300709809|ref|YP_003735623.1| - 1.8e-15 56.5 0.1 2e-15 56.4 0.1 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|300709809|ref|YP_003735623.1| - 4e-07 29.8 0.5 0.00028 20.7 0.1 2.7 3 0 0 3 3 3 2 Biotin-lipoyl like GCV_H PF01597.19 gi|300709809|ref|YP_003735623.1| - 0.0035 17.2 0.1 0.0044 16.9 0.1 1.2 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 gi|300709809|ref|YP_003735623.1| - 0.014 15.3 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.22 gi|300709809|ref|YP_003735623.1| - 0.05 13.8 0.0 0.61 10.3 0.0 2.3 1 1 2 3 3 3 0 Peptidase family M23 Amidase PF01425.21 gi|300709810|ref|YP_003735624.1| - 3.2e-104 349.4 0.0 3.7e-104 349.2 0.0 1.0 1 0 0 1 1 1 1 Amidase DUF848 PF05852.11 gi|300709810|ref|YP_003735624.1| - 0.26 11.4 0.5 0.6 10.2 0.1 1.7 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) HTH_10 PF04967.12 gi|300709812|ref|YP_003735626.1| - 0.00029 20.6 0.0 0.00033 20.4 0.0 1.1 1 0 0 1 1 1 1 HTH DNA binding domain HTH_AraC PF00165.23 gi|300709812|ref|YP_003735626.1| - 0.017 15.2 0.0 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_24 PF13412.6 gi|300709812|ref|YP_003735626.1| - 0.055 13.0 0.0 0.083 12.5 0.0 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_3 PF01381.22 gi|300709812|ref|YP_003735626.1| - 0.099 12.7 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix BAT PF15915.5 gi|300709813|ref|YP_003735627.1| - 2.6e-15 56.6 2.2 3.2e-15 56.3 2.2 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain LamB_YcsF PF03746.16 gi|300709814|ref|YP_003735628.1| - 3.9e-87 291.9 0.0 4.4e-87 291.7 0.0 1.0 1 0 0 1 1 1 1 LamB/YcsF family Polysacc_deac_2 PF04748.13 gi|300709814|ref|YP_003735628.1| - 0.044 13.0 0.0 6.5 5.9 0.0 2.2 2 0 0 2 2 2 0 Divergent polysaccharide deacetylase CT_A_B PF02626.15 gi|300709815|ref|YP_003735629.1| - 5.6e-85 285.2 0.1 6.5e-85 284.9 0.1 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain A and B CT_C_D PF02682.16 gi|300709816|ref|YP_003735630.1| - 7.8e-52 176.0 0.0 1.2e-51 175.4 0.0 1.3 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D CPSase_L_D2 PF02786.17 gi|300709817|ref|YP_003735631.1| - 3.7e-72 242.2 0.0 5.3e-72 241.7 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|300709817|ref|YP_003735631.1| - 5.6e-40 136.3 1.3 1.2e-39 135.2 0.4 2.0 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|300709817|ref|YP_003735631.1| - 4.2e-39 133.0 0.0 9.4e-39 131.9 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp PF02222.22 gi|300709817|ref|YP_003735631.1| - 4.2e-08 32.9 0.0 7.7e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|300709817|ref|YP_003735631.1| - 1.3e-05 24.9 0.0 3.6e-05 23.4 0.0 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 gi|300709817|ref|YP_003735631.1| - 5.5e-05 23.0 0.0 0.00012 21.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 gi|300709817|ref|YP_003735631.1| - 0.0033 17.5 0.0 0.0077 16.3 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|300709817|ref|YP_003735631.1| - 0.0048 16.6 0.0 0.0089 15.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Wzy_C PF04932.15 gi|300709819|ref|YP_003735633.1| - 6.6e-09 35.6 8.0 6.6e-09 35.6 8.0 4.2 2 2 0 2 2 2 1 O-Antigen ligase OsmC PF02566.19 gi|300709820|ref|YP_003735634.1| - 6.7e-17 61.8 0.1 1.1e-16 61.2 0.1 1.3 1 0 0 1 1 1 1 OsmC-like protein MFS_1 PF07690.16 gi|300709821|ref|YP_003735635.1| - 6.1e-39 133.9 57.2 1.2e-36 126.4 47.5 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|300709821|ref|YP_003735635.1| - 2.6 6.8 17.3 0.54 9.1 0.4 3.8 3 2 1 4 4 4 0 MFS_1 like family HTH_24 PF13412.6 gi|300709822|ref|YP_003735636.1| - 1.7e-15 56.3 0.1 2.6e-15 55.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300709822|ref|YP_003735636.1| - 1e-12 47.7 0.0 1.9e-12 46.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|300709822|ref|YP_003735636.1| - 6.4e-07 29.2 0.0 1.1e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|300709822|ref|YP_003735636.1| - 1e-06 28.5 0.0 1.9e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300709822|ref|YP_003735636.1| - 1.1e-06 28.6 0.0 2.3e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300709822|ref|YP_003735636.1| - 2.6e-05 24.3 0.0 4.7e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|300709822|ref|YP_003735636.1| - 6.3e-05 22.9 0.1 0.00013 21.9 0.0 1.5 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|300709822|ref|YP_003735636.1| - 0.00016 21.5 0.0 0.00029 20.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.12 gi|300709822|ref|YP_003735636.1| - 0.00023 20.9 0.0 0.00041 20.0 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|300709822|ref|YP_003735636.1| - 0.00044 20.5 0.0 0.00092 19.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_28 PF13518.6 gi|300709822|ref|YP_003735636.1| - 0.00056 20.0 0.0 0.00096 19.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300709822|ref|YP_003735636.1| - 0.00088 19.0 0.0 0.0016 18.2 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_23 PF13384.6 gi|300709822|ref|YP_003735636.1| - 0.0013 18.4 0.0 0.0021 17.8 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|300709822|ref|YP_003735636.1| - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.5 1 1 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|300709822|ref|YP_003735636.1| - 0.0016 17.9 0.1 0.0029 17.1 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 MarR PF01047.22 gi|300709822|ref|YP_003735636.1| - 0.004 17.0 0.0 0.0071 16.3 0.0 1.3 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|300709822|ref|YP_003735636.1| - 0.0084 15.7 0.0 0.023 14.3 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|300709822|ref|YP_003735636.1| - 0.012 15.5 0.0 0.034 14.0 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_Mga PF08280.11 gi|300709822|ref|YP_003735636.1| - 0.012 15.6 0.0 0.054 13.5 0.0 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_CodY PF08222.11 gi|300709822|ref|YP_003735636.1| - 0.015 14.9 0.0 0.025 14.1 0.0 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_29 PF13551.6 gi|300709822|ref|YP_003735636.1| - 0.023 14.7 0.0 0.039 14.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Sigma70_r3 PF04539.16 gi|300709822|ref|YP_003735636.1| - 0.023 14.8 0.0 0.048 13.8 0.0 1.5 1 0 0 1 1 1 0 Sigma-70 region 3 HTH_36 PF13730.6 gi|300709822|ref|YP_003735636.1| - 0.032 14.2 0.0 0.055 13.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|300709822|ref|YP_003735636.1| - 0.039 13.8 0.0 0.072 12.9 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain LexA_DNA_bind PF01726.16 gi|300709822|ref|YP_003735636.1| - 0.083 12.7 0.0 0.33 10.8 0.0 1.9 2 0 0 2 2 2 0 LexA DNA binding domain HrcA_DNA-bdg PF03444.15 gi|300709822|ref|YP_003735636.1| - 0.091 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_40 PF14493.6 gi|300709822|ref|YP_003735636.1| - 0.096 13.2 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|300709822|ref|YP_003735636.1| - 0.1 12.0 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 DDRGK PF09756.9 gi|300709822|ref|YP_003735636.1| - 0.14 11.7 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain TFIIE_alpha PF02002.17 gi|300709822|ref|YP_003735636.1| - 0.15 11.9 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit ATP-grasp_5 PF13549.6 gi|300709824|ref|YP_003735638.1| - 7.3e-50 169.5 0.0 1.3e-49 168.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|300709824|ref|YP_003735638.1| - 1.5e-42 144.7 0.8 1.4e-39 135.1 0.4 2.5 2 0 0 2 2 2 2 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|300709824|ref|YP_003735638.1| - 1.3e-18 67.6 0.0 3.7e-18 66.1 0.0 1.8 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|300709824|ref|YP_003735638.1| - 3.8e-05 24.3 0.0 0.00026 21.6 0.0 2.3 2 0 0 2 2 2 1 CoA binding domain Bac_luciferase PF00296.20 gi|300709825|ref|YP_003735639.1| - 2.1e-48 165.4 8.9 2.7e-48 165.0 8.9 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase AhpC-TSA PF00578.21 gi|300709826|ref|YP_003735640.1| - 6.4e-33 113.3 0.0 7.9e-33 113.0 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|300709826|ref|YP_003735640.1| - 1.8e-21 76.4 0.0 2.1e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF899 PF05988.12 gi|300709826|ref|YP_003735640.1| - 0.043 13.3 0.0 0.055 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) E1_dh PF00676.20 gi|300709827|ref|YP_003735641.1| - 2.6e-77 259.7 0.0 3.1e-77 259.5 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|300709827|ref|YP_003735641.1| - 2.1e-07 30.4 0.0 3e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 gi|300709827|ref|YP_003735641.1| - 0.0018 18.1 0.3 0.0063 16.3 0.3 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.21 gi|300709827|ref|YP_003735641.1| - 0.0056 15.7 0.1 0.0075 15.3 0.1 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain HTH_41 PF14502.6 gi|300709827|ref|YP_003735641.1| - 0.017 14.8 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain LRV PF01816.17 gi|300709827|ref|YP_003735641.1| - 0.12 12.8 4.0 2.4 8.8 0.2 3.2 2 0 0 2 2 2 0 Leucine rich repeat variant SBF_like PF13593.6 gi|300709828|ref|YP_003735642.1| - 4.4e-08 32.8 21.7 5.8e-08 32.4 21.7 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 gi|300709828|ref|YP_003735642.1| - 1.4e-07 31.4 11.4 1.4e-07 31.4 11.4 2.2 2 1 0 2 2 2 1 Sodium Bile acid symporter family Abhydrolase_3 PF07859.13 gi|300709829|ref|YP_003735643.1| - 2.8e-77 259.4 0.2 3.8e-77 258.9 0.2 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|300709829|ref|YP_003735643.1| - 0.00023 20.2 0.4 0.00096 18.1 0.4 1.8 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 gi|300709829|ref|YP_003735643.1| - 0.0011 18.5 0.0 0.0049 16.4 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family GFO_IDH_MocA PF01408.22 gi|300709830|ref|YP_003735644.1| - 1.7e-20 74.0 0.2 2.6e-20 73.4 0.2 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.24 gi|300709830|ref|YP_003735644.1| - 0.0057 17.1 0.1 0.011 16.2 0.1 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA_C PF02894.17 gi|300709830|ref|YP_003735644.1| - 0.011 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain E1_dh PF00676.20 gi|300709831|ref|YP_003735645.1| - 6.9e-92 307.6 0.0 8.3e-92 307.3 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|300709831|ref|YP_003735645.1| - 1.7e-07 31.1 0.8 9.9e-07 28.7 0.8 2.1 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.21 gi|300709831|ref|YP_003735645.1| - 0.00076 18.5 0.2 0.0012 17.9 0.0 1.4 2 0 0 2 2 2 1 Transketolase, thiamine diphosphate binding domain SHOCT PF09851.9 gi|300709831|ref|YP_003735645.1| - 0.0059 16.3 0.3 0.34 10.7 0.3 2.7 2 0 0 2 2 2 1 Short C-terminal domain NuDC PF16273.5 gi|300709831|ref|YP_003735645.1| - 0.016 15.7 2.5 0.041 14.4 2.5 1.6 1 0 0 1 1 1 0 Nuclear distribution C domain DXP_synthase_N PF13292.6 gi|300709831|ref|YP_003735645.1| - 0.031 13.5 0.1 0.063 12.5 0.1 1.5 1 1 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 gi|300709832|ref|YP_003735646.1| - 4.7e-44 150.2 0.6 7.6e-44 149.5 0.6 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|300709832|ref|YP_003735646.1| - 6.5e-31 106.8 0.6 1.1e-30 106.0 0.2 1.6 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|300709832|ref|YP_003735646.1| - 0.028 14.7 0.0 0.06 13.7 0.0 1.6 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II NAD_kinase PF01513.21 gi|300709833|ref|YP_003735647.1| - 3.6e-12 46.1 0.3 5.4e-12 45.5 0.3 1.3 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|300709833|ref|YP_003735647.1| - 7.2e-06 25.6 0.9 4.1e-05 23.2 0.7 2.1 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain LEA_5 PF00477.17 gi|300709833|ref|YP_003735647.1| - 0.033 14.6 0.1 0.033 14.6 0.1 2.2 3 0 0 3 3 3 0 Small hydrophilic plant seed protein E3_binding PF02817.17 gi|300709834|ref|YP_003735648.1| - 2.9e-26 91.5 5.8 1.2e-13 51.2 0.8 2.7 2 0 0 2 2 2 2 e3 binding domain 2-oxoacid_dh PF00198.23 gi|300709834|ref|YP_003735648.1| - 7.2e-15 55.1 0.0 3.3e-14 52.9 0.0 1.8 1 1 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|300709834|ref|YP_003735648.1| - 1.6e-14 53.4 0.5 3.7e-14 52.3 0.5 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|300709834|ref|YP_003735648.1| - 0.0015 18.3 0.0 0.0044 16.8 0.0 1.9 1 0 0 1 1 1 1 Biotin-lipoyl like HlyD_3 PF13437.6 gi|300709834|ref|YP_003735648.1| - 0.0077 16.9 0.1 3.3 8.5 0.0 2.5 2 0 0 2 2 2 2 HlyD family secretion protein LPD22 PF18834.1 gi|300709834|ref|YP_003735648.1| - 0.021 15.0 2.4 0.11 12.7 0.2 2.7 1 1 1 2 2 2 0 Large polyvalent protein associated domain 22 IF-2 PF11987.8 gi|300709834|ref|YP_003735648.1| - 0.15 12.2 0.3 1.7 8.8 0.0 2.6 3 0 0 3 3 3 0 Translation-initiation factor 2 DUF1932 PF09130.11 gi|300709834|ref|YP_003735648.1| - 0.37 10.8 3.0 5.6 7.0 0.1 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1932) MR_MLE_C PF13378.6 gi|300709835|ref|YP_003735649.1| - 3.4e-62 209.9 0.5 4.7e-62 209.4 0.5 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300709835|ref|YP_003735649.1| - 2e-11 44.1 0.0 3.3e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LUD_dom PF02589.15 gi|300709836|ref|YP_003735650.1| - 2.5e-44 151.3 0.0 4e-44 150.6 0.0 1.4 1 0 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 gi|300709836|ref|YP_003735650.1| - 3.6e-09 36.9 3.2 8.3e-09 35.8 3.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300709836|ref|YP_003735650.1| - 3.5e-08 33.4 3.4 0.00044 20.3 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|300709836|ref|YP_003735650.1| - 4.8e-07 30.2 2.3 1e-06 29.2 2.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|300709836|ref|YP_003735650.1| - 1.2e-06 29.0 5.5 3.9e-06 27.3 5.5 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300709836|ref|YP_003735650.1| - 4.8e-06 26.6 6.6 2e-05 24.6 6.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300709836|ref|YP_003735650.1| - 5.3e-06 26.0 15.0 0.0002 21.0 2.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain CCG PF02754.16 gi|300709836|ref|YP_003735650.1| - 2.2e-05 24.6 0.7 0.00053 20.2 0.1 3.0 3 0 0 3 3 3 1 Cysteine-rich domain Fer4_21 PF14697.6 gi|300709836|ref|YP_003735650.1| - 3.6e-05 23.8 8.4 0.00018 21.5 8.4 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300709836|ref|YP_003735650.1| - 0.00018 21.4 12.8 0.00083 19.3 2.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300709836|ref|YP_003735650.1| - 0.00029 21.1 12.9 0.038 14.5 3.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|300709836|ref|YP_003735650.1| - 0.00056 19.8 15.1 0.011 15.7 4.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|300709836|ref|YP_003735650.1| - 0.001 20.0 5.9 0.067 14.1 0.4 2.7 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|300709836|ref|YP_003735650.1| - 0.011 16.5 7.5 0.061 14.2 0.8 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|300709836|ref|YP_003735650.1| - 0.015 16.2 5.2 0.015 16.2 5.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|300709836|ref|YP_003735650.1| - 0.055 13.2 0.2 0.055 13.2 0.2 2.4 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_15 PF13459.6 gi|300709836|ref|YP_003735650.1| - 0.23 12.2 5.3 0.56 11.0 0.2 3.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|300709836|ref|YP_003735650.1| - 0.28 11.4 11.0 0.14 12.3 2.2 2.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|300709836|ref|YP_003735650.1| - 10 6.8 11.8 5.8 7.5 1.9 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I LUD_dom PF02589.15 gi|300709837|ref|YP_003735651.1| - 9e-15 54.9 0.0 1.8e-14 53.9 0.0 1.4 2 0 0 2 2 2 1 LUD domain Usp PF00582.26 gi|300709838|ref|YP_003735652.1| - 1.2e-21 77.7 2.2 1.4e-21 77.5 2.2 1.0 1 0 0 1 1 1 1 Universal stress protein family ADH_N PF08240.12 gi|300709839|ref|YP_003735653.1| - 3.4e-32 110.6 0.3 3.4e-32 110.6 0.3 1.6 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|300709839|ref|YP_003735653.1| - 1.6e-25 89.6 0.0 2.6e-25 88.9 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|300709839|ref|YP_003735653.1| - 6.6e-13 48.6 0.9 1.1e-12 48.0 0.9 1.4 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|300709839|ref|YP_003735653.1| - 2.7e-07 31.7 0.0 6.3e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_25 PF13649.6 gi|300709839|ref|YP_003735653.1| - 0.026 15.2 0.1 0.043 14.5 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain GD_AH_C PF04295.13 gi|300709840|ref|YP_003735654.1| - 1.6e-62 211.6 5.2 3.9e-42 144.4 2.0 2.1 2 0 0 2 2 2 2 D-galactarate dehydratase / Altronate hydrolase, C terminus SAF PF08666.12 gi|300709841|ref|YP_003735655.1| - 7.7e-15 55.3 0.3 1.2e-14 54.6 0.1 1.5 2 0 0 2 2 2 1 SAF domain MoeA_N PF03453.17 gi|300709841|ref|YP_003735655.1| - 0.012 15.4 0.1 0.014 15.1 0.1 1.1 1 0 0 1 1 1 0 MoeA N-terminal region (domain I and II) GD_AH_C PF04295.13 gi|300709842|ref|YP_003735656.1| - 1.6e-134 448.6 1.0 2e-134 448.3 1.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus DctM PF06808.12 gi|300709843|ref|YP_003735657.1| - 9.6e-108 360.6 47.7 1.1e-107 360.5 47.7 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DctQ PF04290.12 gi|300709844|ref|YP_003735658.1| - 8.2e-17 61.4 9.0 9.8e-17 61.1 9.0 1.1 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component DctP PF03480.13 gi|300709845|ref|YP_003735659.1| - 2.9e-60 204.1 0.0 3.2e-60 203.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 adh_short_C2 PF13561.6 gi|300709846|ref|YP_003735660.1| - 4.2e-67 226.1 4.4 4.8e-67 225.9 4.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300709846|ref|YP_003735660.1| - 1.8e-61 207.0 3.1 2.1e-61 206.8 3.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300709846|ref|YP_003735660.1| - 1e-16 61.4 0.9 1.5e-16 60.8 0.9 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300709846|ref|YP_003735660.1| - 0.00015 21.4 0.2 0.00035 20.1 0.2 1.7 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|300709846|ref|YP_003735660.1| - 0.002 18.0 0.9 0.0029 17.5 0.9 1.4 1 0 0 1 1 1 1 NAD(P)H-binding THF_DHG_CYH_C PF02882.19 gi|300709846|ref|YP_003735660.1| - 0.0028 17.0 0.1 0.0069 15.7 0.1 1.7 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GDP_Man_Dehyd PF16363.5 gi|300709846|ref|YP_003735660.1| - 0.0082 15.6 0.1 0.025 14.0 0.1 1.7 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|300709846|ref|YP_003735660.1| - 0.03 13.5 0.1 0.039 13.1 0.1 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 gi|300709846|ref|YP_003735660.1| - 0.094 12.6 1.0 0.2 11.5 1.0 1.6 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UxuA PF03786.13 gi|300709847|ref|YP_003735661.1| - 3.5e-85 285.9 0.2 1.4e-58 198.4 0.0 2.0 1 1 1 2 2 2 2 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.24 gi|300709847|ref|YP_003735661.1| - 6.8e-15 55.1 0.1 1e-14 54.5 0.1 1.3 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel IclR PF01614.18 gi|300709848|ref|YP_003735662.1| - 7.2e-34 116.4 0.0 1.1e-33 115.9 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 gi|300709848|ref|YP_003735662.1| - 3e-11 43.0 0.0 1e-09 38.0 0.0 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|300709848|ref|YP_003735662.1| - 1.6e-06 27.8 0.0 2.8e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|300709848|ref|YP_003735662.1| - 0.0014 18.2 0.0 0.0029 17.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|300709848|ref|YP_003735662.1| - 0.0018 18.1 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|300709848|ref|YP_003735662.1| - 0.0022 17.9 0.0 0.14 12.1 0.0 2.6 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 gi|300709848|ref|YP_003735662.1| - 0.0024 17.7 0.0 0.0086 15.9 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300709848|ref|YP_003735662.1| - 0.0065 16.3 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|300709848|ref|YP_003735662.1| - 0.04 14.1 0.1 0.13 12.5 0.0 1.8 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Epimerase PF01370.21 gi|300709849|ref|YP_003735663.1| - 2.2e-44 151.7 0.2 2.7e-44 151.4 0.2 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300709849|ref|YP_003735663.1| - 4.7e-43 147.8 0.3 2.4e-42 145.5 0.3 2.1 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|300709849|ref|YP_003735663.1| - 2.7e-12 46.4 0.1 2.9e-12 46.3 0.1 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|300709849|ref|YP_003735663.1| - 9.6e-11 41.2 0.2 1.6e-10 40.5 0.2 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|300709849|ref|YP_003735663.1| - 4.3e-09 35.9 0.1 3.5e-06 26.4 0.0 2.3 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|300709849|ref|YP_003735663.1| - 1.2e-07 31.2 0.0 5.7e-05 22.4 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein KR PF08659.10 gi|300709849|ref|YP_003735663.1| - 0.015 15.2 0.1 0.53 10.2 0.0 2.2 2 0 0 2 2 2 0 KR domain adh_short PF00106.25 gi|300709849|ref|YP_003735663.1| - 0.03 13.8 0.5 1.3 8.4 0.1 2.6 1 1 0 2 2 2 0 short chain dehydrogenase TrkA_N PF02254.18 gi|300709849|ref|YP_003735663.1| - 0.13 12.5 0.1 3.3 8.0 0.0 2.7 3 0 0 3 3 3 0 TrkA-N domain LMF1 PF06762.14 gi|300709850|ref|YP_003735664.1| - 5.9e-128 427.7 13.7 2.4e-67 228.0 0.1 2.4 2 1 1 3 3 3 2 Lipase maturation factor DUF393 PF04134.12 gi|300709851|ref|YP_003735665.1| - 4.4e-12 47.3 0.1 5.1e-12 47.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF393 Arginase PF00491.21 gi|300709852|ref|YP_003735666.1| - 7.6e-06 25.6 0.0 8.2e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 Arginase family DUF4350 PF14258.6 gi|300709855|ref|YP_003735669.1| - 1.4e-08 35.0 0.4 1.2e-07 32.0 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4350) AAA_3 PF07726.11 gi|300709856|ref|YP_003735670.1| - 3e-61 205.0 0.2 6.9e-61 203.9 0.2 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|300709856|ref|YP_003735670.1| - 1.8e-18 66.2 1.8 3.8e-18 65.1 1.8 1.6 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|300709856|ref|YP_003735670.1| - 3.2e-16 59.6 0.0 5.2e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|300709856|ref|YP_003735670.1| - 5.3e-06 25.7 0.0 8.3e-06 25.1 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|300709856|ref|YP_003735670.1| - 8.2e-05 22.4 0.1 0.00082 19.1 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|300709856|ref|YP_003735670.1| - 0.00029 20.6 0.1 0.0017 18.1 0.1 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 gi|300709856|ref|YP_003735670.1| - 0.00099 19.5 0.0 0.0048 17.3 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|300709856|ref|YP_003735670.1| - 0.0049 17.3 0.0 0.016 15.6 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|300709856|ref|YP_003735670.1| - 0.019 14.4 0.3 0.37 10.1 0.1 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI SHR3_chaperone PF08229.11 gi|300709857|ref|YP_003735671.1| - 0.08 11.9 0.5 0.088 11.8 0.5 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 BPD_transp_1 PF00528.22 gi|300709858|ref|YP_003735672.1| - 1.8e-34 119.1 6.9 1.8e-34 119.1 6.9 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|300709858|ref|YP_003735672.1| - 0.00019 21.4 0.3 0.00019 21.4 0.3 2.3 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C EptA_B_N PF08019.12 gi|300709858|ref|YP_003735672.1| - 0.012 15.5 0.2 0.012 15.5 0.2 2.2 2 1 0 2 2 2 0 Phosphoethanolamine transferase EptA/EptB BPD_transp_1 PF00528.22 gi|300709859|ref|YP_003735673.1| - 8.9e-38 129.9 9.5 8.9e-38 129.9 9.5 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|300709860|ref|YP_003735674.1| - 1.5e-83 280.8 3.2 1.9e-83 280.5 3.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.27 gi|300709861|ref|YP_003735675.1| - 1.1e-55 187.9 0.0 4.2e-30 105.0 0.0 3.3 3 0 0 3 3 3 3 ABC transporter oligo_HPY PF08352.12 gi|300709861|ref|YP_003735675.1| - 5e-39 132.7 0.7 4.2e-20 72.0 0.2 2.6 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|300709861|ref|YP_003735675.1| - 5.2e-12 46.2 0.1 5.1e-05 23.2 0.0 4.0 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300709861|ref|YP_003735675.1| - 1.5e-07 32.0 0.6 0.0017 18.8 0.2 2.7 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|300709861|ref|YP_003735675.1| - 9.8e-07 29.1 2.4 0.048 13.9 0.1 4.1 3 2 0 3 3 3 2 AAA domain SMC_N PF02463.19 gi|300709861|ref|YP_003735675.1| - 4.5e-06 26.3 0.4 0.041 13.3 0.0 4.3 4 1 0 4 4 4 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300709861|ref|YP_003735675.1| - 0.00019 21.1 0.8 0.58 9.9 0.1 2.3 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|300709861|ref|YP_003735675.1| - 0.0031 17.5 0.1 1.2 9.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|300709861|ref|YP_003735675.1| - 0.0032 17.2 0.1 1.7 8.3 0.0 3.2 2 1 0 3 3 3 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 gi|300709861|ref|YP_003735675.1| - 0.0085 15.6 0.0 0.73 9.3 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region DUF3618 PF12277.8 gi|300709861|ref|YP_003735675.1| - 0.016 15.5 5.3 0.039 14.2 4.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3618) RsgA_GTPase PF03193.16 gi|300709861|ref|YP_003735675.1| - 0.029 14.3 0.2 4.1 7.3 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase AAA PF00004.29 gi|300709861|ref|YP_003735675.1| - 0.033 14.6 0.1 2.5 8.5 0.0 3.7 6 0 0 6 6 3 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|300709861|ref|YP_003735675.1| - 0.034 13.9 0.1 9.8 5.9 0.0 2.8 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_25 PF13481.6 gi|300709861|ref|YP_003735675.1| - 0.11 12.0 8.0 2.1 7.8 2.0 4.1 4 1 0 4 4 4 0 AAA domain NB-ARC PF00931.22 gi|300709861|ref|YP_003735675.1| - 0.14 11.3 0.0 16 4.6 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain AIG1 PF04548.16 gi|300709861|ref|YP_003735675.1| - 0.2 11.0 0.7 5.7 6.2 0.0 2.4 2 0 0 2 2 2 0 AIG1 family DUF3987 PF13148.6 gi|300709861|ref|YP_003735675.1| - 0.2 10.6 0.8 1.5 7.8 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3987) AAA_13 PF13166.6 gi|300709861|ref|YP_003735675.1| - 0.36 9.4 0.3 5.2 5.6 0.1 2.1 2 0 0 2 2 2 0 AAA domain CitMHS PF03600.16 gi|300709863|ref|YP_003735677.1| - 4.3e-60 203.4 14.1 4.3e-60 203.4 14.1 1.6 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 gi|300709863|ref|YP_003735677.1| - 4.3e-25 88.7 39.8 3.7e-17 62.5 18.6 3.2 3 0 0 3 3 3 3 Sodium:sulfate symporter transmembrane region TrkA_C PF02080.21 gi|300709863|ref|YP_003735677.1| - 1.3e-17 63.3 4.5 5.3e-10 39.0 0.3 2.5 2 0 0 2 2 2 2 TrkA-C domain Peptidase_M48 PF01435.18 gi|300709864|ref|YP_003735678.1| - 2.3e-37 128.7 0.0 3.2e-37 128.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|300709864|ref|YP_003735678.1| - 5.5e-06 25.8 0.3 6.9e-05 22.2 0.0 2.1 2 0 0 2 2 2 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|300709864|ref|YP_003735678.1| - 0.087 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 SprT-like family DUF4157 PF13699.6 gi|300709864|ref|YP_003735678.1| - 0.14 12.4 0.6 0.38 11.0 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4157) DUF5455 PF17537.2 gi|300709864|ref|YP_003735678.1| - 0.43 11.0 4.2 4.2 7.8 0.0 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5455) YdjM PF04307.14 gi|300709865|ref|YP_003735679.1| - 1.5e-07 30.9 15.4 1.9e-07 30.6 15.4 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF751 PF05421.11 gi|300709865|ref|YP_003735679.1| - 0.37 11.6 7.6 4.8 8.0 0.2 3.6 3 1 1 4 4 4 0 Protein of unknown function (DUF751) Peripla_BP_2 PF01497.18 gi|300709866|ref|YP_003735680.1| - 5.8e-14 52.2 0.0 6.6e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.9 gi|300709866|ref|YP_003735680.1| - 0.44 10.5 1.4 0.69 9.8 1.4 1.3 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Pyr_redox_2 PF07992.14 gi|300709867|ref|YP_003735681.1| - 1.3e-07 31.1 0.0 2.8e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|300709867|ref|YP_003735681.1| - 7.7e-06 25.4 0.0 1.9e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|300709867|ref|YP_003735681.1| - 3.5e-05 23.2 0.2 0.035 13.4 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|300709867|ref|YP_003735681.1| - 5.8e-05 22.3 0.0 8.6e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|300709867|ref|YP_003735681.1| - 0.00012 21.6 2.5 0.00017 21.1 0.4 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300709867|ref|YP_003735681.1| - 0.00017 20.8 0.1 0.00017 20.8 0.1 1.8 2 1 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|300709867|ref|YP_003735681.1| - 0.00043 20.4 0.2 0.0014 18.9 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|300709867|ref|YP_003735681.1| - 0.0015 17.8 0.0 0.0032 16.7 0.0 1.5 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|300709867|ref|YP_003735681.1| - 0.0022 16.8 0.0 0.0073 15.1 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_9 PF13454.6 gi|300709867|ref|YP_003735681.1| - 0.0092 16.0 1.7 0.24 11.4 0.1 2.7 2 0 0 2 2 2 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|300709867|ref|YP_003735681.1| - 0.018 14.1 0.2 0.06 12.4 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|300709867|ref|YP_003735681.1| - 0.031 14.8 1.4 0.088 13.4 0.1 2.3 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|300709867|ref|YP_003735681.1| - 0.16 10.8 2.6 2.7 6.8 0.0 2.2 1 1 1 2 2 2 0 Tryptophan halogenase DAO PF01266.24 gi|300709867|ref|YP_003735681.1| - 0.16 11.5 11.1 1.2 8.6 10.8 2.6 1 1 0 1 1 1 0 FAD dependent oxidoreductase Peripla_BP_2 PF01497.18 gi|300709868|ref|YP_003735682.1| - 1.3e-12 47.8 0.0 1.7e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein DHR-2 PF06920.13 gi|300709868|ref|YP_003735682.1| - 0.2 10.3 0.0 0.28 9.8 0.0 1.1 1 0 0 1 1 1 0 Dock homology region 2 Na_H_Exchanger PF00999.21 gi|300709869|ref|YP_003735683.1| - 9.1e-36 123.4 47.6 1.2e-35 123.0 47.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family LTD PF00932.19 gi|300709870|ref|YP_003735684.1| - 2.6e-12 47.1 0.1 4.8e-12 46.2 0.1 1.4 1 0 0 1 1 1 1 Lamin Tail Domain PCuAC PF04314.13 gi|300709870|ref|YP_003735684.1| - 0.005 16.6 0.0 0.031 14.1 0.0 2.0 1 1 0 1 1 1 1 Copper chaperone PCu(A)C DUF4232 PF14016.6 gi|300709870|ref|YP_003735684.1| - 0.014 15.5 0.6 0.027 14.6 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) PcrB PF01884.17 gi|300709871|ref|YP_003735685.1| - 2e-24 86.3 0.2 2.7e-24 85.9 0.2 1.1 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|300709871|ref|YP_003735685.1| - 0.0027 17.2 0.0 0.0043 16.5 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein DHO_dh PF01180.21 gi|300709871|ref|YP_003735685.1| - 0.11 11.7 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase TAT_signal PF10518.9 gi|300709874|ref|YP_003735688.1| - 0.0057 16.5 2.6 0.011 15.6 2.6 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence ABC_tran PF00005.27 gi|300709879|ref|YP_003735693.1| - 1.4e-32 113.0 0.0 1.9e-32 112.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|300709879|ref|YP_003735693.1| - 2e-05 24.3 0.1 4.6e-05 23.1 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|300709879|ref|YP_003735693.1| - 4.4e-05 23.9 2.1 9.1e-05 22.9 2.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|300709879|ref|YP_003735693.1| - 5.6e-05 23.1 0.7 0.061 13.1 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300709879|ref|YP_003735693.1| - 8.4e-05 22.1 0.4 0.035 13.5 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|300709879|ref|YP_003735693.1| - 0.002 18.4 0.2 0.072 13.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|300709879|ref|YP_003735693.1| - 0.0021 18.6 0.2 0.0043 17.6 0.2 1.4 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 gi|300709879|ref|YP_003735693.1| - 0.019 14.0 0.0 0.036 13.1 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein RsgA_GTPase PF03193.16 gi|300709879|ref|YP_003735693.1| - 0.025 14.5 0.1 0.04 13.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 gi|300709879|ref|YP_003735693.1| - 0.034 14.4 0.1 0.7 10.2 0.1 2.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit cobW PF02492.19 gi|300709879|ref|YP_003735693.1| - 0.039 13.5 0.1 0.28 10.8 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_11 PF13086.6 gi|300709879|ref|YP_003735693.1| - 0.061 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|300709879|ref|YP_003735693.1| - 0.062 13.2 2.2 0.33 10.9 0.1 2.6 2 2 1 3 3 3 0 NACHT domain SRPRB PF09439.10 gi|300709879|ref|YP_003735693.1| - 0.071 12.5 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_30 PF13604.6 gi|300709879|ref|YP_003735693.1| - 0.074 12.8 0.1 0.23 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|300709879|ref|YP_003735693.1| - 0.089 12.4 0.5 0.96 9.0 0.5 2.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|300709879|ref|YP_003735693.1| - 0.14 11.8 0.1 2.9 7.6 0.0 2.5 2 1 0 2 2 2 0 IstB-like ATP binding protein RNA12 PF10443.9 gi|300709879|ref|YP_003735693.1| - 0.17 10.6 0.0 0.23 10.2 0.0 1.1 1 0 0 1 1 1 0 RNA12 protein AAA_18 PF13238.6 gi|300709879|ref|YP_003735693.1| - 0.18 12.4 0.2 0.87 10.1 0.2 2.1 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|300709879|ref|YP_003735693.1| - 0.23 10.6 0.0 0.23 10.6 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Epimerase PF01370.21 gi|300709880|ref|YP_003735694.1| - 5e-50 170.2 0.0 5.9e-50 170.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300709880|ref|YP_003735694.1| - 6.4e-43 147.4 0.0 8.5e-43 147.0 0.0 1.3 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|300709880|ref|YP_003735694.1| - 1.1e-15 57.5 0.0 6.4e-15 55.0 0.0 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|300709880|ref|YP_003735694.1| - 1.6e-15 56.9 0.0 2e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|300709880|ref|YP_003735694.1| - 2.4e-12 46.6 0.0 3.1e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|300709880|ref|YP_003735694.1| - 5.1e-12 46.1 0.0 7.8e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|300709880|ref|YP_003735694.1| - 8.8e-09 34.9 0.1 0.00032 20.0 0.0 2.6 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|300709880|ref|YP_003735694.1| - 9.4e-05 22.0 0.3 0.0033 16.9 0.3 2.6 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 gi|300709880|ref|YP_003735694.1| - 0.00054 19.6 0.0 0.039 13.5 0.0 2.2 2 0 0 2 2 2 1 NmrA-like family KR PF08659.10 gi|300709880|ref|YP_003735694.1| - 0.0027 17.7 0.9 0.064 13.2 1.5 2.7 2 1 0 2 2 2 1 KR domain TrkA_N PF02254.18 gi|300709880|ref|YP_003735694.1| - 0.006 16.8 0.1 0.01 16.1 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_17 PF12692.7 gi|300709880|ref|YP_003735694.1| - 0.023 14.7 0.0 0.068 13.2 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-methionine methyltransferase Sortilin-Vps10 PF15902.5 gi|300709881|ref|YP_003735695.1| - 0.00029 19.8 0.1 0.00051 18.9 0.1 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, BNR PF02012.20 gi|300709881|ref|YP_003735695.1| - 0.00036 20.1 2.0 0.63 10.3 0.5 3.2 2 0 0 2 2 2 2 BNR/Asp-box repeat TAT_signal PF10518.9 gi|300709881|ref|YP_003735695.1| - 0.16 11.9 0.3 0.27 11.2 0.3 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Yae1_N PF09811.9 gi|300709882|ref|YP_003735696.1| - 3.6 7.4 25.9 14 5.4 0.5 7.2 7 0 0 7 7 7 0 Essential protein Yae1, N terminal DUF3824 PF12868.7 gi|300709883|ref|YP_003735697.1| - 0.36 11.5 0.7 0.49 11.0 0.7 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) Sortilin-Vps10 PF15902.5 gi|300709884|ref|YP_003735698.1| - 0.00023 20.1 0.1 0.00047 19.1 0.1 1.5 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, TAT_signal PF10518.9 gi|300709884|ref|YP_003735698.1| - 0.01 15.7 0.9 0.017 15.0 0.9 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence BNR PF02012.20 gi|300709884|ref|YP_003735698.1| - 0.04 13.9 5.1 2 8.7 0.0 3.8 3 0 0 3 3 3 0 BNR/Asp-box repeat DUF2892 PF11127.8 gi|300709885|ref|YP_003735699.1| - 4.4e-14 52.3 3.4 5e-14 52.1 3.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) DUF3040 PF11239.8 gi|300709885|ref|YP_003735699.1| - 0.018 15.3 0.8 0.021 15.1 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF4177 PF13783.6 gi|300709886|ref|YP_003735700.1| - 1.6e-09 37.9 0.7 1.9e-09 37.7 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) DUF2812 PF11193.8 gi|300709886|ref|YP_003735700.1| - 0.066 13.4 0.1 0.12 12.6 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2812) p450 PF00067.22 gi|300709887|ref|YP_003735701.1| - 4.4e-81 273.0 0.0 5.1e-81 272.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 M PF02370.16 gi|300709889|ref|YP_003735703.1| - 0.44 11.2 1.9 1.3 9.8 1.9 1.8 1 0 0 1 1 1 0 M protein repeat CSD PF00313.22 gi|300709891|ref|YP_003735705.1| - 5.7e-18 64.5 0.6 8e-18 64.1 0.6 1.2 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain Peptidase_U4 PF03419.13 gi|300709892|ref|YP_003735706.1| - 0.011 15.1 1.8 0.012 14.9 1.8 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF3974 PF13120.6 gi|300709892|ref|YP_003735706.1| - 0.051 13.7 0.2 0.063 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) COX14 PF14880.6 gi|300709892|ref|YP_003735706.1| - 1.9 8.4 5.2 69 3.4 5.2 2.3 1 1 0 1 1 1 0 Cytochrome oxidase c assembly DUF3951 PF13131.6 gi|300709892|ref|YP_003735706.1| - 5.7 7.2 9.4 2.3 8.5 1.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3951) HHH_5 PF14520.6 gi|300709896|ref|YP_003735710.1| - 2.3e-09 37.7 0.0 4e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|300709896|ref|YP_003735710.1| - 2.9e-06 27.6 0.4 0.023 15.0 0.0 2.8 1 1 1 2 2 2 2 Helix-hairpin-helix domain HHH PF00633.23 gi|300709896|ref|YP_003735710.1| - 0.00025 20.7 0.0 0.49 10.4 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|300709896|ref|YP_003735710.1| - 0.00043 20.1 0.0 0.001 18.9 0.0 1.6 1 1 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|300709896|ref|YP_003735710.1| - 0.00049 20.3 0.1 0.012 15.8 0.0 2.4 2 1 1 3 3 3 1 Pathogenicity locus HHH_2 PF12826.7 gi|300709896|ref|YP_003735710.1| - 0.0006 19.9 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|300709896|ref|YP_003735710.1| - 0.0011 19.2 0.0 0.13 12.5 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|300709896|ref|YP_003735710.1| - 0.0016 18.6 0.0 0.29 11.5 0.0 2.6 2 0 0 2 2 2 1 IMS family HHH motif FTA4 PF13093.6 gi|300709896|ref|YP_003735710.1| - 0.0052 16.7 0.5 0.0064 16.4 0.5 1.1 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Transposase_20 PF02371.16 gi|300709896|ref|YP_003735710.1| - 0.014 15.7 0.0 7.7 6.9 0.0 2.6 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family DIMCO_N PF16844.5 gi|300709896|ref|YP_003735710.1| - 0.047 14.0 0.1 0.11 12.8 0.1 1.6 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal LytR_C PF13399.6 gi|300709896|ref|YP_003735710.1| - 0.051 14.6 0.5 0.68 11.0 0.0 2.5 2 1 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator BAF PF02961.14 gi|300709896|ref|YP_003735710.1| - 0.073 13.5 0.0 0.45 11.0 0.0 2.1 1 1 1 2 2 2 0 Barrier to autointegration factor Usp PF00582.26 gi|300709897|ref|YP_003735711.1| - 6.3e-21 75.4 2.3 1.6e-20 74.1 2.3 1.6 1 1 0 1 1 1 1 Universal stress protein family ADH_zinc_N PF00107.26 gi|300709897|ref|YP_003735711.1| - 0.099 12.6 0.2 3 7.9 0.1 2.1 2 0 0 2 2 2 0 Zinc-binding dehydrogenase 3HCDH_N PF02737.18 gi|300709898|ref|YP_003735712.1| - 7.3e-50 169.4 0.0 9.3e-50 169.0 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|300709898|ref|YP_003735712.1| - 2.8e-15 56.7 0.0 8.4e-15 55.2 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|300709898|ref|YP_003735712.1| - 0.00022 21.4 0.1 0.00046 20.4 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|300709898|ref|YP_003735712.1| - 0.00027 20.6 0.0 0.00043 20.0 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 gi|300709898|ref|YP_003735712.1| - 0.0003 20.1 0.1 0.00041 19.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain F420_oxidored PF03807.17 gi|300709898|ref|YP_003735712.1| - 0.0009 19.8 0.1 0.0026 18.3 0.1 1.9 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Pyr_redox_2 PF07992.14 gi|300709898|ref|YP_003735712.1| - 0.0012 18.1 0.1 0.0018 17.6 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300709898|ref|YP_003735712.1| - 0.0052 17.3 0.2 0.011 16.3 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|300709898|ref|YP_003735712.1| - 0.0068 16.4 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_8 PF13450.6 gi|300709898|ref|YP_003735712.1| - 0.014 15.7 0.1 0.025 14.8 0.1 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain ThiF PF00899.21 gi|300709898|ref|YP_003735712.1| - 0.016 14.6 0.2 0.026 13.9 0.2 1.2 1 0 0 1 1 1 0 ThiF family UDPG_MGDP_dh_N PF03721.14 gi|300709898|ref|YP_003735712.1| - 0.016 14.8 0.1 0.025 14.1 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|300709898|ref|YP_003735712.1| - 0.017 15.4 2.4 0.023 15.0 0.1 2.1 1 1 1 2 2 2 0 TrkA-N domain Shikimate_DH PF01488.20 gi|300709898|ref|YP_003735712.1| - 0.041 13.9 0.1 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DAO PF01266.24 gi|300709898|ref|YP_003735712.1| - 0.044 13.4 0.9 0.11 12.0 0.5 1.7 1 1 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|300709898|ref|YP_003735712.1| - 0.074 13.5 0.1 0.13 12.7 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding IlvN PF07991.12 gi|300709898|ref|YP_003735712.1| - 0.13 11.8 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pyr_redox_3 PF13738.6 gi|300709898|ref|YP_003735712.1| - 0.16 11.2 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|300709898|ref|YP_003735712.1| - 0.19 12.0 0.5 0.46 10.7 0.4 1.8 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain PTPS_related PF10131.9 gi|300709899|ref|YP_003735713.1| - 0.00042 18.8 5.5 0.00054 18.4 5.5 1.2 1 0 0 1 1 1 1 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein DUF2254 PF10011.9 gi|300709899|ref|YP_003735713.1| - 0.068 12.0 1.1 0.097 11.5 1.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) MatC_N PF07158.11 gi|300709899|ref|YP_003735713.1| - 0.28 11.2 7.5 5 7.2 2.3 2.3 2 0 0 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus PMT_2 PF13231.6 gi|300709900|ref|YP_003735714.1| - 0.27 11.4 5.0 0.3 11.3 1.1 2.0 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase AI-2E_transport PF01594.16 gi|300709901|ref|YP_003735715.1| - 3.6e-44 151.3 31.7 4.4e-44 151.0 31.7 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF21 PF01595.20 gi|300709901|ref|YP_003735715.1| - 7.4 6.2 16.5 1.9 8.1 7.5 2.6 2 1 0 2 2 2 0 Cyclin M transmembrane N-terminal domain HSBP1 PF06825.12 gi|300709902|ref|YP_003735716.1| - 0.0013 18.6 0.8 0.013 15.3 0.1 2.3 2 0 0 2 2 2 1 Heat shock factor binding protein 1 FlxA PF14282.6 gi|300709902|ref|YP_003735716.1| - 0.0093 15.9 1.7 0.019 14.9 1.7 1.5 1 0 0 1 1 1 1 FlxA-like protein TMF_TATA_bd PF12325.8 gi|300709902|ref|YP_003735716.1| - 0.0099 16.1 1.7 0.013 15.7 0.3 1.9 2 0 0 2 2 2 1 TATA element modulatory factor 1 TATA binding DUF4407 PF14362.6 gi|300709902|ref|YP_003735716.1| - 0.028 13.8 0.2 0.039 13.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Telomere_Sde2_2 PF13297.6 gi|300709902|ref|YP_003735716.1| - 0.028 14.0 0.5 0.21 11.3 0.2 2.2 2 0 0 2 2 2 0 Telomere stability C-terminal Lzipper-MIP1 PF14389.6 gi|300709902|ref|YP_003735716.1| - 0.037 14.3 0.1 0.071 13.4 0.1 1.5 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF1192 PF06698.11 gi|300709902|ref|YP_003735716.1| - 0.043 13.9 1.7 0.099 12.7 1.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) YabA PF06156.13 gi|300709902|ref|YP_003735716.1| - 0.087 13.5 0.6 0.52 11.0 0.2 2.0 2 0 0 2 2 2 0 Initiation control protein YabA E3_UbLigase_R4 PF13764.6 gi|300709902|ref|YP_003735716.1| - 0.15 10.2 0.8 0.19 9.8 0.8 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase UBR4 FlaC_arch PF05377.11 gi|300709902|ref|YP_003735716.1| - 0.19 12.1 0.3 5.6 7.4 0.1 2.8 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Snf7 PF03357.21 gi|300709902|ref|YP_003735716.1| - 1.8 8.1 6.2 0.62 9.6 3.1 1.7 2 0 0 2 2 2 0 Snf7 LIM PF00412.22 gi|300709903|ref|YP_003735717.1| - 0.00034 20.8 0.5 0.0024 18.0 0.5 2.0 1 1 0 1 1 1 1 LIM domain HECT_2 PF09814.9 gi|300709903|ref|YP_003735717.1| - 0.42 9.4 1.2 12 4.6 0.0 2.0 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding MR_MLE_C PF13378.6 gi|300709904|ref|YP_003735718.1| - 3.4e-59 200.1 0.1 5.2e-59 199.5 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300709904|ref|YP_003735718.1| - 4e-15 56.0 0.1 7.3e-15 55.2 0.1 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aminotran_1_2 PF00155.21 gi|300709905|ref|YP_003735719.1| - 2.2e-64 217.9 0.0 2.5e-64 217.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|300709905|ref|YP_003735719.1| - 8.8e-11 41.7 0.5 1.4e-10 41.0 0.5 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|300709905|ref|YP_003735719.1| - 8.3e-07 28.3 0.0 3.7e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|300709905|ref|YP_003735719.1| - 7.8e-05 21.4 0.0 0.00015 20.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 gi|300709905|ref|YP_003735719.1| - 0.031 13.2 0.0 0.053 12.4 0.0 1.3 1 0 0 1 1 1 0 Allinase Beta_elim_lyase PF01212.21 gi|300709905|ref|YP_003735719.1| - 0.063 12.6 0.0 0.099 11.9 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase 2-Hacid_dh_C PF02826.19 gi|300709906|ref|YP_003735720.1| - 4.3e-48 163.0 0.0 6.3e-48 162.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300709906|ref|YP_003735720.1| - 1.2e-07 31.5 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IlvN PF07991.12 gi|300709906|ref|YP_003735720.1| - 0.034 13.7 0.0 0.069 12.7 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain ThiF PF00899.21 gi|300709906|ref|YP_003735720.1| - 0.066 12.6 0.0 0.099 12.0 0.0 1.2 1 0 0 1 1 1 0 ThiF family F420_oxidored PF03807.17 gi|300709906|ref|YP_003735720.1| - 0.091 13.4 0.1 0.32 11.6 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|300709906|ref|YP_003735720.1| - 0.12 12.4 0.2 0.39 10.8 0.1 2.0 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NTP_transferase PF00483.23 gi|300709907|ref|YP_003735721.1| - 5.4e-32 111.3 0.0 5.9e-32 111.2 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|300709907|ref|YP_003735721.1| - 6.9e-07 29.7 0.0 8e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain AAA_22 PF13401.6 gi|300709908|ref|YP_003735722.1| - 9.4e-09 35.7 0.0 1.9e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300709908|ref|YP_003735722.1| - 4.9e-07 30.3 0.1 3.1e-06 27.7 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain NACHT PF05729.12 gi|300709908|ref|YP_003735722.1| - 9.6e-07 28.9 0.0 1.6e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 gi|300709908|ref|YP_003735722.1| - 1.4e-06 28.8 0.0 3.5e-06 27.5 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cdc6_C PF09079.11 gi|300709908|ref|YP_003735722.1| - 0.00013 21.9 0.2 0.0033 17.4 0.0 2.4 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA_25 PF13481.6 gi|300709908|ref|YP_003735722.1| - 0.0017 17.9 0.1 0.16 11.5 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|300709908|ref|YP_003735722.1| - 0.0029 17.4 0.1 0.0077 16.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|300709908|ref|YP_003735722.1| - 0.01 15.9 0.0 0.024 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|300709908|ref|YP_003735722.1| - 0.016 14.6 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|300709908|ref|YP_003735722.1| - 0.017 15.4 0.1 0.052 13.8 0.1 1.9 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|300709908|ref|YP_003735722.1| - 0.017 14.8 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|300709908|ref|YP_003735722.1| - 0.026 14.2 0.1 0.062 13.0 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|300709908|ref|YP_003735722.1| - 0.028 14.7 0.7 0.1 12.9 0.7 1.9 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|300709908|ref|YP_003735722.1| - 0.029 14.8 0.0 0.2 12.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 gi|300709908|ref|YP_003735722.1| - 0.037 14.0 0.1 0.17 11.9 0.1 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 gi|300709908|ref|YP_003735722.1| - 0.056 13.2 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|300709908|ref|YP_003735722.1| - 0.068 12.9 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|300709908|ref|YP_003735722.1| - 0.078 12.5 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 gi|300709908|ref|YP_003735722.1| - 0.11 12.7 0.0 0.25 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|300709908|ref|YP_003735722.1| - 0.12 11.8 0.1 1.1 8.7 0.1 2.2 1 1 0 1 1 1 0 Bacterial TniB protein TMP_2 PF06791.13 gi|300709909|ref|YP_003735723.1| - 0.061 13.0 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Prophage tail length tape measure protein YpzI PF14140.6 gi|300709909|ref|YP_003735723.1| - 0.13 12.1 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 YpzI-like protein ADH_zinc_N PF00107.26 gi|300709910|ref|YP_003735724.1| - 2.3e-23 82.6 0.1 4e-23 81.8 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|300709910|ref|YP_003735724.1| - 1.6e-21 76.2 0.2 3e-21 75.4 0.2 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 gi|300709910|ref|YP_003735724.1| - 4.4e-16 60.1 0.1 8.5e-16 59.2 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase NADH_4Fe-4S PF10589.9 gi|300709910|ref|YP_003735724.1| - 0.0051 16.9 0.3 0.014 15.4 0.3 1.8 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Rrf2 PF02082.20 gi|300709912|ref|YP_003735726.1| - 0.00053 20.3 0.0 0.00076 19.8 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|300709912|ref|YP_003735726.1| - 0.0014 18.4 0.0 0.0045 16.8 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|300709912|ref|YP_003735726.1| - 0.0047 16.8 0.0 0.0082 16.0 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300709912|ref|YP_003735726.1| - 0.0098 15.8 0.0 0.029 14.3 0.0 1.8 1 1 1 2 2 2 1 MarR family Fe_dep_repress PF01325.19 gi|300709912|ref|YP_003735726.1| - 0.018 15.2 0.0 0.03 14.5 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|300709912|ref|YP_003735726.1| - 0.042 14.3 0.0 0.076 13.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HemN_C PF06969.16 gi|300709912|ref|YP_003735726.1| - 0.062 13.4 0.0 7.6 6.7 0.0 2.3 2 0 0 2 2 2 0 HemN C-terminal domain HrcA_DNA-bdg PF03444.15 gi|300709913|ref|YP_003735727.1| - 0.004 16.8 0.0 0.0079 15.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_23 PF13384.6 gi|300709913|ref|YP_003735727.1| - 0.0087 15.8 0.1 0.23 11.3 0.0 2.8 3 0 0 3 3 3 1 Homeodomain-like domain TrmB PF01978.19 gi|300709913|ref|YP_003735727.1| - 0.042 13.7 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB GST_C_2 PF13410.6 gi|300709913|ref|YP_003735727.1| - 0.045 13.8 0.8 0.26 11.3 0.8 2.1 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain FaeA PF04703.12 gi|300709913|ref|YP_003735727.1| - 0.08 13.3 0.0 1.5 9.3 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein HTH_27 PF13463.6 gi|300709913|ref|YP_003735727.1| - 0.1 13.1 0.0 0.23 12.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_7 PF02796.15 gi|300709914|ref|YP_003735728.1| - 2e-05 24.6 0.0 6.5e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase GntR PF00392.21 gi|300709914|ref|YP_003735728.1| - 0.00046 19.8 0.1 0.0028 17.3 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|300709914|ref|YP_003735728.1| - 0.00049 19.9 0.0 0.0013 18.5 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|300709914|ref|YP_003735728.1| - 0.00075 19.5 1.4 0.0036 17.3 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|300709914|ref|YP_003735728.1| - 0.0012 18.7 0.7 0.0074 16.2 0.0 2.5 3 0 0 3 3 3 1 HTH domain MarR_2 PF12802.7 gi|300709914|ref|YP_003735728.1| - 0.0092 15.8 0.4 0.023 14.6 0.1 1.8 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|300709914|ref|YP_003735728.1| - 0.033 14.1 0.1 0.097 12.7 0.0 1.8 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DUF5405 PF17399.2 gi|300709914|ref|YP_003735728.1| - 0.038 14.3 0.0 2 8.7 0.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF5405) HTH_23 PF13384.6 gi|300709914|ref|YP_003735728.1| - 0.047 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HEPN-like_int PF18867.1 gi|300709914|ref|YP_003735728.1| - 0.062 13.2 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 HEPN-like integron domain HTH_IclR PF09339.10 gi|300709914|ref|YP_003735728.1| - 0.082 12.7 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain Histone_HNS PF00816.21 gi|300709914|ref|YP_003735728.1| - 0.12 13.2 4.0 0.14 13.0 2.6 1.9 2 1 0 2 2 2 0 H-NS histone family PqqD PF05402.12 gi|300709916|ref|YP_003735730.1| - 0.00056 20.2 2.4 0.00078 19.7 0.7 2.0 2 0 0 2 2 2 1 Coenzyme PQQ synthesis protein D (PqqD) HTH_11 PF08279.12 gi|300709916|ref|YP_003735730.1| - 0.041 13.8 0.0 0.18 11.8 0.0 2.1 1 1 1 2 2 2 0 HTH domain RbsD_FucU PF05025.13 gi|300709916|ref|YP_003735730.1| - 0.06 13.8 0.1 0.073 13.5 0.1 1.4 1 1 0 1 1 1 0 RbsD / FucU transport protein family DUF4777 PF16007.5 gi|300709916|ref|YP_003735730.1| - 0.17 12.1 0.5 0.41 10.9 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) Smoothelin PF12510.8 gi|300709916|ref|YP_003735730.1| - 9.8 6.3 11.9 0.17 12.0 0.8 2.9 3 0 0 3 3 3 0 Smoothelin cytoskeleton protein YdjM PF04307.14 gi|300709917|ref|YP_003735731.1| - 1.1e-12 47.7 6.1 1.4e-12 47.3 6.1 1.2 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase FlxA PF14282.6 gi|300709918|ref|YP_003735732.1| - 0.0071 16.3 2.7 0.013 15.4 2.7 1.4 1 0 0 1 1 1 1 FlxA-like protein DUF2203 PF09969.9 gi|300709918|ref|YP_003735732.1| - 0.0077 16.9 0.1 0.016 16.0 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) Ubiquitin_3 PF14836.6 gi|300709918|ref|YP_003735732.1| - 0.015 15.2 0.3 2 8.4 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-like domain DUF1192 PF06698.11 gi|300709918|ref|YP_003735732.1| - 0.032 14.3 3.3 0.032 14.3 3.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1192) SKA2 PF16740.5 gi|300709918|ref|YP_003735732.1| - 0.047 13.5 5.9 0.13 12.1 5.9 1.7 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 HSBP1 PF06825.12 gi|300709918|ref|YP_003735732.1| - 0.065 13.1 0.1 0.065 13.1 0.1 1.9 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Cep57_MT_bd PF06657.13 gi|300709918|ref|YP_003735732.1| - 0.065 13.7 1.2 0.065 13.7 1.2 1.7 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 FlaC_arch PF05377.11 gi|300709918|ref|YP_003735732.1| - 0.089 13.2 2.9 1.3 9.5 0.5 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) ABC_tran_CTD PF16326.5 gi|300709918|ref|YP_003735732.1| - 0.12 12.7 6.6 0.088 13.1 2.6 2.3 2 0 0 2 2 2 0 ABC transporter C-terminal domain YabA PF06156.13 gi|300709918|ref|YP_003735732.1| - 0.19 12.4 1.3 0.38 11.4 1.1 1.6 1 1 0 1 1 1 0 Initiation control protein YabA E3_UbLigase_R4 PF13764.6 gi|300709918|ref|YP_003735732.1| - 0.23 9.6 2.7 0.27 9.3 2.7 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase UBR4 ZapB PF06005.12 gi|300709918|ref|YP_003735732.1| - 0.23 11.9 5.5 0.54 10.7 5.5 1.6 1 0 0 1 1 1 0 Cell division protein ZapB Snf7 PF03357.21 gi|300709918|ref|YP_003735732.1| - 0.29 10.7 6.9 0.3 10.7 3.5 2.1 2 0 0 2 2 2 0 Snf7 DUF2312 PF10073.9 gi|300709918|ref|YP_003735732.1| - 0.42 10.3 6.8 0.095 12.4 1.2 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) HAUS6_N PF14661.6 gi|300709918|ref|YP_003735732.1| - 0.45 10.1 3.6 0.59 9.7 3.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus UPF0242 PF06785.11 gi|300709918|ref|YP_003735732.1| - 0.47 10.5 4.2 0.66 10.0 4.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 gi|300709918|ref|YP_003735732.1| - 0.8 10.2 6.0 5.2 7.6 6.0 2.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Dynamitin PF04912.14 gi|300709918|ref|YP_003735732.1| - 1.3 8.3 8.9 9.6 5.4 9.0 2.0 1 1 0 1 1 1 0 Dynamitin FtsX PF02687.21 gi|300709919|ref|YP_003735733.1| - 2.4e-05 24.7 22.6 0.00015 22.2 6.4 4.5 4 1 1 5 5 5 2 FtsX-like permease family CARDB PF07705.11 gi|300709919|ref|YP_003735733.1| - 0.0032 17.7 0.7 0.0032 17.7 0.7 3.6 3 1 1 4 4 4 1 CARDB CHASE5 PF17149.4 gi|300709919|ref|YP_003735733.1| - 0.087 12.7 0.0 6.2 6.8 0.0 2.6 2 0 0 2 2 2 0 Periplasmic sensor domain found in signal transduction proteins Glyco_hydro_2 PF00703.21 gi|300709919|ref|YP_003735733.1| - 1.9 9.2 5.1 1.4 9.6 0.2 2.8 3 0 0 3 3 3 0 Glycosyl hydrolases family 2 SKG6 PF08693.10 gi|300709921|ref|YP_003735735.1| - 0.022 14.2 1.0 0.022 14.2 1.0 4.6 6 0 0 6 6 6 0 Transmembrane alpha-helix domain DUF5134 PF17197.4 gi|300709921|ref|YP_003735735.1| - 6.3 6.7 14.1 3.4 7.6 2.6 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF5134) Polysacc_synt_C PF14667.6 gi|300709922|ref|YP_003735736.1| - 4.1e-18 65.8 13.8 4.1e-18 65.8 13.8 3.7 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.17 gi|300709922|ref|YP_003735736.1| - 7.3e-17 61.6 17.3 7.3e-17 61.6 17.3 2.2 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|300709922|ref|YP_003735736.1| - 1.4e-14 54.0 16.5 2.1e-14 53.5 16.5 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|300709922|ref|YP_003735736.1| - 5.2e-06 25.3 9.9 5.2e-06 25.3 9.9 2.5 1 1 0 2 2 2 1 Lipid II flippase MurJ SpoIIIAC PF06686.11 gi|300709922|ref|YP_003735736.1| - 0.0052 16.9 0.6 1 9.6 0.0 3.9 3 0 0 3 3 3 1 Stage III sporulation protein AC/AD protein family Glycos_transf_2 PF00535.26 gi|300709923|ref|YP_003735737.1| - 6.4e-25 87.9 0.2 9.4e-25 87.4 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300709923|ref|YP_003735737.1| - 1.7e-17 64.1 0.0 2.2e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|300709923|ref|YP_003735737.1| - 1.5e-10 41.0 0.1 3e-10 40.0 0.1 1.4 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|300709923|ref|YP_003735737.1| - 6.3e-06 25.8 0.0 9.2e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|300709923|ref|YP_003735737.1| - 0.00042 20.8 0.1 0.00079 19.9 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_5 PF13712.6 gi|300709923|ref|YP_003735737.1| - 0.008 15.9 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family FAD_binding_4 PF01565.23 gi|300709924|ref|YP_003735738.1| - 1.2e-19 70.5 0.0 2e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain MurB_C PF02873.16 gi|300709924|ref|YP_003735738.1| - 0.00025 21.1 0.2 0.052 13.6 0.2 2.3 1 1 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FAD_binding_5 PF00941.21 gi|300709924|ref|YP_003735738.1| - 0.008 15.9 0.0 0.015 15.0 0.0 1.5 1 1 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase Glycos_transf_2 PF00535.26 gi|300709925|ref|YP_003735739.1| - 1.5e-26 93.3 0.0 2e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300709925|ref|YP_003735739.1| - 2.7e-14 53.6 0.0 4.1e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|300709925|ref|YP_003735739.1| - 1e-10 41.6 0.0 1.5e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Alginate_lyase PF05426.12 gi|300709926|ref|YP_003735740.1| - 0.012 15.2 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 Alginate lyase Transposase_28 PF04195.12 gi|300709927|ref|YP_003735741.1| - 0.062 13.5 0.3 0.07 13.4 0.3 1.1 1 0 0 1 1 1 0 Putative gypsy type transposon DUF354 PF04007.12 gi|300709929|ref|YP_003735743.1| - 4.4e-20 72.0 0.0 5.2e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|300709929|ref|YP_003735743.1| - 0.00012 22.2 0.1 0.00021 21.3 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|300709929|ref|YP_003735743.1| - 0.00078 19.5 0.4 0.0077 16.2 0.3 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300709929|ref|YP_003735743.1| - 0.09 13.2 0.1 0.25 11.8 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain Glycos_transf_2 PF00535.26 gi|300709930|ref|YP_003735744.1| - 2.5e-15 56.7 0.0 1.9e-07 31.0 0.0 2.3 1 1 0 2 2 2 2 Glycosyl transferase family 2 DUF1616 PF07760.11 gi|300709931|ref|YP_003735745.1| - 1e-123 412.4 1.3 1.2e-123 412.2 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF4870 PF09685.10 gi|300709931|ref|YP_003735745.1| - 0.066 13.3 0.2 0.066 13.3 0.2 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4870) CarboxypepD_reg PF13620.6 gi|300709932|ref|YP_003735746.1| - 1.8e-12 47.3 22.9 9.5e-06 25.8 1.2 3.9 3 1 0 3 3 3 3 Carboxypeptidase regulatory-like domain Big_3_5 PF16640.5 gi|300709932|ref|YP_003735746.1| - 4.9e-10 39.5 31.1 4.8e-05 23.5 3.1 3.5 3 0 0 3 3 3 3 Bacterial Ig-like domain (group 3) Big_7 PF17957.1 gi|300709932|ref|YP_003735746.1| - 2.9e-07 31.2 13.4 0.031 15.0 0.6 4.2 3 1 1 4 4 4 3 Bacterial Ig domain CarbopepD_reg_2 PF13715.6 gi|300709932|ref|YP_003735746.1| - 1.6e-06 28.0 5.7 0.0086 16.1 0.1 4.1 4 0 0 4 4 4 2 CarboxypepD_reg-like domain Big_1 PF02369.16 gi|300709932|ref|YP_003735746.1| - 2.6e-05 24.1 18.4 7.4e-05 22.7 0.9 4.1 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 1) Dioxygenase_C PF00775.21 gi|300709932|ref|YP_003735746.1| - 3.5e-05 23.3 0.3 2.3 7.6 0.0 4.3 4 1 0 4 4 4 1 Dioxygenase TTR-52 PF01060.23 gi|300709932|ref|YP_003735746.1| - 0.0021 18.7 0.1 1.1 9.9 0.0 3.0 3 0 0 3 3 2 1 Transthyretin-like family Big_6 PF17936.1 gi|300709932|ref|YP_003735746.1| - 0.017 15.4 16.9 0.31 11.3 0.9 4.1 3 1 1 4 4 4 0 Bacterial Ig domain PEP-CTERM PF07589.11 gi|300709932|ref|YP_003735746.1| - 0.02 14.9 0.3 0.041 14.0 0.3 1.5 1 0 0 1 1 1 0 PEP-CTERM motif CooC_C PF15976.5 gi|300709932|ref|YP_003735746.1| - 0.022 14.8 0.0 0.45 10.6 0.0 2.9 3 0 0 3 3 3 0 CS1-pili formation C-terminal DUF824 PF05688.11 gi|300709932|ref|YP_003735746.1| - 0.32 10.8 3.4 1.6 8.6 0.1 3.1 3 0 0 3 3 3 0 Salmonella repeat of unknown function (DUF824) Syntaxin-6_N PF09177.11 gi|300709932|ref|YP_003735746.1| - 0.38 11.3 10.1 0.9 10.1 10.1 1.7 1 0 0 1 1 1 0 Syntaxin 6, N-terminal MetallophosN PF16371.5 gi|300709932|ref|YP_003735746.1| - 0.4 11.0 6.8 2.9 8.2 0.1 3.3 3 0 0 3 3 3 0 N terminal of Calcineurin-like phosphoesterase YlqD PF11068.8 gi|300709932|ref|YP_003735746.1| - 0.97 9.8 5.9 1.8 8.9 5.9 1.4 1 0 0 1 1 1 0 YlqD protein Invasin_D3 PF09134.10 gi|300709932|ref|YP_003735746.1| - 1.1 9.6 24.9 0.062 13.6 1.7 3.7 2 1 1 3 3 3 0 Invasin, domain 3 DUF3347 PF11827.8 gi|300709932|ref|YP_003735746.1| - 4.4 7.4 8.3 9.4 6.4 8.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) DUF58 PF01882.18 gi|300709933|ref|YP_003735747.1| - 9.7e-21 73.9 0.1 2.9e-20 72.3 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|300709933|ref|YP_003735747.1| - 0.008 16.8 0.0 0.022 15.4 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain TolA_bind_tri PF16331.5 gi|300709933|ref|YP_003735747.1| - 0.41 10.8 2.9 22 5.2 0.0 2.5 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF3040 PF11239.8 gi|300709935|ref|YP_003735749.1| - 0.071 13.4 0.8 0.15 12.3 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF2207 PF09972.9 gi|300709935|ref|YP_003735749.1| - 0.21 10.3 0.0 0.28 9.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NYD-SP28_assoc PF14775.6 gi|300709935|ref|YP_003735749.1| - 0.32 11.1 1.5 0.66 10.1 1.5 1.5 1 0 0 1 1 1 0 Sperm tail C-terminal domain DUF1676 PF07898.13 gi|300709936|ref|YP_003735750.1| - 0.015 15.4 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TAT_signal PF10518.9 gi|300709937|ref|YP_003735751.1| - 0.0081 16.0 2.6 0.015 15.1 2.6 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Polysacc_deac_1 PF01522.21 gi|300709940|ref|YP_003735754.1| - 3.9e-22 78.4 0.0 7e-22 77.6 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300709940|ref|YP_003735754.1| - 0.023 14.4 0.2 0.41 10.3 0.1 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2334) PadR PF03551.14 gi|300709943|ref|YP_003735757.1| - 3.4e-07 30.1 0.2 4.4e-07 29.8 0.2 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HxlR PF01638.17 gi|300709943|ref|YP_003735757.1| - 0.0033 17.2 0.1 0.004 17.0 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|300709943|ref|YP_003735757.1| - 0.013 15.5 0.1 0.016 15.2 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Polysacc_deac_1 PF01522.21 gi|300709944|ref|YP_003735758.1| - 4.3e-10 39.5 0.1 1.8e-08 34.3 0.1 2.5 3 0 0 3 3 3 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300709944|ref|YP_003735758.1| - 2.6e-05 24.0 0.1 8.2e-05 22.4 0.1 1.8 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) DUF3979 PF13141.6 gi|300709945|ref|YP_003735759.1| - 0.01 16.1 0.7 0.016 15.4 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) CarboxypepD_reg PF13620.6 gi|300709946|ref|YP_003735760.1| - 0.08 13.2 0.7 0.28 11.5 0.1 2.4 2 0 0 2 2 2 0 Carboxypeptidase regulatory-like domain PMT_2 PF13231.6 gi|300709948|ref|YP_003735762.1| - 1.6e-14 54.4 12.7 1.6e-14 54.4 12.7 3.7 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PAGK PF15284.6 gi|300709948|ref|YP_003735762.1| - 0.13 12.2 0.2 1.1 9.2 0.0 2.5 3 0 0 3 3 3 0 Phage-encoded virulence factor Epimerase PF01370.21 gi|300709949|ref|YP_003735763.1| - 3.3e-40 138.0 0.0 4.2e-40 137.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300709949|ref|YP_003735763.1| - 9.8e-25 87.6 0.0 1.6e-24 87.0 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|300709949|ref|YP_003735763.1| - 1.4e-22 80.1 0.0 1.9e-22 79.6 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|300709949|ref|YP_003735763.1| - 6.6e-15 55.5 0.0 9.8e-15 54.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|300709949|ref|YP_003735763.1| - 3.5e-13 49.3 0.0 4.9e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|300709949|ref|YP_003735763.1| - 2.6e-10 39.9 1.5 6e-08 32.2 0.0 2.6 1 1 1 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|300709949|ref|YP_003735763.1| - 2.2e-08 33.6 0.3 1.4e-07 30.9 0.3 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 gi|300709949|ref|YP_003735763.1| - 9.7e-06 25.3 0.0 1.7e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|300709949|ref|YP_003735763.1| - 9.6e-05 21.9 0.0 0.00017 21.1 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300709949|ref|YP_003735763.1| - 0.0026 17.7 1.2 0.081 12.8 1.2 2.3 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 gi|300709949|ref|YP_003735763.1| - 0.04 13.5 0.1 0.4 10.2 0.1 2.2 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain adh_short_C2 PF13561.6 gi|300709949|ref|YP_003735763.1| - 0.059 12.9 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase UbiA PF01040.18 gi|300709950|ref|YP_003735764.1| - 6.3e-25 87.9 13.8 6.3e-25 87.9 13.8 1.6 1 1 0 1 1 1 1 UbiA prenyltransferase family Gate PF07670.14 gi|300709950|ref|YP_003735764.1| - 0.48 10.7 5.3 7.7 6.8 5.0 2.8 1 1 0 1 1 1 0 Nucleoside recognition Col_cuticle_N PF01484.17 gi|300709950|ref|YP_003735764.1| - 2.3 8.3 0.0 2.3 8.3 0.0 3.4 4 0 0 4 4 4 0 Nematode cuticle collagen N-terminal domain PHP_C PF13263.6 gi|300709951|ref|YP_003735765.1| - 1.3e-13 50.4 0.0 2.3e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|300709951|ref|YP_003735765.1| - 9.3e-07 29.3 0.0 9.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 PHP domain LPG_synthase_TM PF03706.13 gi|300709952|ref|YP_003735766.1| - 9.8e-38 130.4 44.5 1.2e-37 130.1 44.5 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region ATP19 PF11022.8 gi|300709952|ref|YP_003735766.1| - 0.68 10.3 2.8 3.7 8.0 0.0 3.0 4 0 0 4 4 4 0 ATP synthase subunit K FUSC-like PF12805.7 gi|300709952|ref|YP_003735766.1| - 0.69 8.9 5.0 1.9 7.5 5.0 1.7 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Arylsulfotran_2 PF14269.6 gi|300709953|ref|YP_003735767.1| - 5.5e-08 32.5 0.2 4.9e-06 26.1 0.1 2.5 2 1 0 2 2 2 1 Arylsulfotransferase (ASST) Arylsulfotrans PF05935.11 gi|300709953|ref|YP_003735767.1| - 9.4e-07 28.1 2.0 4.1e-05 22.7 1.1 3.3 1 1 2 3 3 3 2 Arylsulfotransferase (ASST) NHL PF01436.21 gi|300709953|ref|YP_003735767.1| - 0.00015 21.6 0.5 0.77 9.9 0.0 3.3 3 0 0 3 3 3 2 NHL repeat PALP PF00291.25 gi|300709954|ref|YP_003735768.1| - 7.2e-62 209.4 0.3 8.1e-62 209.3 0.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme SSF PF00474.17 gi|300709955|ref|YP_003735769.1| - 6.3e-34 117.5 23.5 1.1e-33 116.8 23.5 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family MFS_1 PF07690.16 gi|300709956|ref|YP_003735770.1| - 6.3e-37 127.3 70.8 3.7e-32 111.6 45.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 gi|300709956|ref|YP_003735770.1| - 4.2e-05 22.5 6.7 4.2e-05 22.5 6.7 2.3 2 0 0 2 2 2 1 LacY proton/sugar symporter Meth_synt_2 PF01717.18 gi|300709957|ref|YP_003735771.1| - 2.8e-16 59.7 0.2 1.4e-08 34.4 0.1 2.1 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Lactamase_B PF00753.27 gi|300709958|ref|YP_003735772.1| - 1.4e-15 57.8 7.6 7.9e-15 55.4 7.6 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.20 gi|300709958|ref|YP_003735772.1| - 7.5e-12 45.7 0.0 6.9e-11 42.6 0.0 2.5 2 1 0 2 2 2 1 Rhodanese-like domain Lactamase_B_2 PF12706.7 gi|300709958|ref|YP_003735772.1| - 0.034 13.6 0.2 0.065 12.7 0.2 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain TrmB PF01978.19 gi|300709960|ref|YP_003735774.1| - 2.6e-13 49.6 0.0 3.5e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|300709960|ref|YP_003735774.1| - 5.2e-09 35.8 0.0 9.3e-09 35.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|300709960|ref|YP_003735774.1| - 1.4e-06 28.1 0.0 2.3e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 HTH domain Penicillinase_R PF03965.16 gi|300709960|ref|YP_003735774.1| - 3.7e-06 27.3 0.0 5e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor MarR PF01047.22 gi|300709960|ref|YP_003735774.1| - 3.9e-06 26.7 0.1 9.2e-06 25.5 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|300709960|ref|YP_003735774.1| - 0.00024 21.1 0.0 0.00044 20.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300709960|ref|YP_003735774.1| - 0.00076 19.3 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF4777 PF16007.5 gi|300709960|ref|YP_003735774.1| - 0.0012 19.1 0.1 0.0053 17.0 0.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4777) HARE-HTH PF05066.13 gi|300709960|ref|YP_003735774.1| - 0.0014 19.0 0.1 0.028 14.8 0.0 2.5 3 0 0 3 3 2 1 HB1, ASXL, restriction endonuclease HTH domain HTH_24 PF13412.6 gi|300709960|ref|YP_003735774.1| - 0.0016 18.0 0.0 0.0022 17.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RepB PF07506.11 gi|300709960|ref|YP_003735774.1| - 0.0023 18.1 0.1 0.0039 17.3 0.1 1.5 1 1 0 1 1 1 1 RepB plasmid partitioning protein Dimerisation PF08100.11 gi|300709960|ref|YP_003735774.1| - 0.005 16.8 0.0 0.0088 16.0 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain HTH_38 PF13936.6 gi|300709960|ref|YP_003735774.1| - 0.0057 16.4 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_12 PF08461.10 gi|300709960|ref|YP_003735774.1| - 0.0073 16.2 0.1 0.015 15.2 0.1 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_Crp_2 PF13545.6 gi|300709960|ref|YP_003735774.1| - 0.014 15.4 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain UMPH-1 PF05822.12 gi|300709960|ref|YP_003735774.1| - 0.019 14.5 0.1 0.031 13.8 0.1 1.5 1 1 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) DUF4423 PF14394.6 gi|300709960|ref|YP_003735774.1| - 0.039 13.7 0.1 0.075 12.7 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) TBPIP PF07106.13 gi|300709960|ref|YP_003735774.1| - 0.041 13.8 0.0 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain HTH_23 PF13384.6 gi|300709960|ref|YP_003735774.1| - 0.056 13.3 0.0 0.096 12.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Dimerisation2 PF16864.5 gi|300709960|ref|YP_003735774.1| - 0.063 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain HTH_27 PF13463.6 gi|300709960|ref|YP_003735774.1| - 0.084 13.4 0.1 0.17 12.4 0.1 1.6 1 1 1 2 2 2 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|300709960|ref|YP_003735774.1| - 0.086 13.2 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_29 PF13551.6 gi|300709960|ref|YP_003735774.1| - 0.093 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Fe_dep_repress PF01325.19 gi|300709960|ref|YP_003735774.1| - 0.096 12.9 0.0 0.27 11.5 0.0 1.7 2 0 0 2 2 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF2551 PF10826.8 gi|300709960|ref|YP_003735774.1| - 0.12 12.6 0.0 0.18 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2551) TauE PF01925.19 gi|300709961|ref|YP_003735775.1| - 1.7e-42 145.7 43.2 1.7e-42 145.7 43.2 1.7 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE Sulf_transp PF04143.14 gi|300709963|ref|YP_003735777.1| - 3.2e-07 30.2 16.5 6.1e-07 29.3 5.6 2.1 1 1 1 2 2 2 2 Sulphur transport DUF2207 PF09972.9 gi|300709963|ref|YP_003735777.1| - 0.98 8.1 4.3 0.28 9.9 0.3 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Sulf_transp PF04143.14 gi|300709964|ref|YP_003735778.1| - 2.4e-12 47.1 17.7 2.9e-12 46.8 17.7 1.1 1 0 0 1 1 1 1 Sulphur transport Lactamase_B PF00753.27 gi|300709965|ref|YP_003735779.1| - 2.4e-20 73.4 4.1 3.8e-20 72.7 4.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rhodanese PF00581.20 gi|300709965|ref|YP_003735779.1| - 3.8e-11 43.5 0.0 7.8e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain Lactamase_B_2 PF12706.7 gi|300709965|ref|YP_003735779.1| - 0.0015 18.0 0.6 0.0065 16.0 0.6 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|300709965|ref|YP_003735779.1| - 0.024 14.5 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain TusA PF01206.17 gi|300709966|ref|YP_003735780.1| - 1.9e-21 75.6 0.0 2.2e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|300709966|ref|YP_003735780.1| - 0.023 14.5 0.1 0.074 12.9 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) DrsE_2 PF13686.6 gi|300709967|ref|YP_003735781.1| - 3.1e-51 173.3 0.0 3.7e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|300709967|ref|YP_003735781.1| - 1.9e-07 31.5 0.0 6.4e-07 29.8 0.0 1.8 1 1 0 1 1 1 1 DsrE/DsrF-like family DUF2270 PF10028.9 gi|300709968|ref|YP_003735782.1| - 1.4e-73 246.4 7.5 1.6e-73 246.2 7.5 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2270) CarboxypepD_reg PF13620.6 gi|300709969|ref|YP_003735783.1| - 2e-09 37.6 17.2 3e-06 27.4 1.3 3.1 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain SdrD_B PF17210.3 gi|300709969|ref|YP_003735783.1| - 1.4e-05 25.3 1.1 1.4e-05 25.3 1.1 3.8 2 1 1 3 3 3 1 SdrD B-like domain CarbopepD_reg_2 PF13715.6 gi|300709969|ref|YP_003735783.1| - 0.00015 21.7 3.0 0.66 10.0 0.1 3.3 1 1 1 2 2 2 2 CarboxypepD_reg-like domain Spore_III_AF PF09581.10 gi|300709969|ref|YP_003735783.1| - 0.063 13.3 0.1 2.9 7.9 0.0 3.1 2 1 0 2 2 2 0 Stage III sporulation protein AF (Spore_III_AF) RNA_pol_Rpc4 PF05132.14 gi|300709969|ref|YP_003735783.1| - 0.21 12.0 6.5 0.39 11.1 0.0 2.4 1 1 1 2 2 2 0 RNA polymerase III RPC4 LBP_C PF17386.2 gi|300709969|ref|YP_003735783.1| - 8.6 6.4 6.5 6.8 6.7 0.3 3.0 3 0 0 3 3 3 0 Lacto-N-biose phosphorylase C-terminal domain Amidase PF01425.21 gi|300709972|ref|YP_003735786.1| - 1.9e-93 313.9 0.0 3.1e-93 313.2 0.0 1.3 1 1 0 1 1 1 1 Amidase Apq12 PF12716.7 gi|300709973|ref|YP_003735787.1| - 0.11 12.5 0.5 0.11 12.5 0.5 2.1 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis ABC2_membrane_2 PF12679.7 gi|300709974|ref|YP_003735788.1| - 2.3e-24 86.2 12.6 2.6e-24 86.0 12.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|300709974|ref|YP_003735788.1| - 3.1e-06 26.5 16.6 3.4e-06 26.4 16.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|300709974|ref|YP_003735788.1| - 1 8.8 19.4 0.37 10.2 12.8 2.3 2 1 0 2 2 2 0 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|300709975|ref|YP_003735789.1| - 1.4e-13 50.8 0.1 7.1e-13 48.5 0.1 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|300709975|ref|YP_003735789.1| - 0.013 15.5 0.0 0.017 15.1 0.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein MFS_1 PF07690.16 gi|300709976|ref|YP_003735790.1| - 1.2e-13 50.7 58.1 1e-08 34.6 33.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily NADH-u_ox-rdase PF10785.9 gi|300709976|ref|YP_003735790.1| - 1.7 9.4 8.0 4.7 8.0 0.2 3.6 3 1 0 3 3 3 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit Chromate_transp PF02417.15 gi|300709977|ref|YP_003735791.1| - 3.8e-68 228.6 40.2 5.7e-36 124.0 12.0 2.3 2 0 0 2 2 2 2 Chromate transporter DUF423 PF04241.15 gi|300709977|ref|YP_003735791.1| - 0.86 9.9 0.0 0.86 9.9 0.0 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF423) TetR_N PF00440.23 gi|300709979|ref|YP_003735793.1| - 1.1e-10 41.1 0.3 1.8e-10 40.4 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|300709979|ref|YP_003735793.1| - 1.1e-08 35.3 1.3 1.1e-08 35.3 1.3 2.1 2 1 1 3 3 3 1 BetI-type transcriptional repressor, C-terminal TetR_C_24 PF17932.1 gi|300709979|ref|YP_003735793.1| - 7e-05 23.1 0.1 0.00016 21.9 0.1 1.7 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain ParB_C PF18064.1 gi|300709979|ref|YP_003735793.1| - 0.032 14.4 0.2 0.079 13.1 0.2 1.7 1 0 0 1 1 1 0 Centromere-binding protein ParB C-terminal HTH_23 PF13384.6 gi|300709979|ref|YP_003735793.1| - 0.068 13.0 0.0 0.19 11.6 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_17 PF12728.7 gi|300709979|ref|YP_003735793.1| - 0.07 13.3 0.1 14 5.9 0.0 3.5 3 0 0 3 3 3 0 Helix-turn-helix domain ABC_tran PF00005.27 gi|300709980|ref|YP_003735794.1| - 2.6e-34 118.7 0.0 4.6e-34 117.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300709980|ref|YP_003735794.1| - 2.2e-08 34.3 1.0 0.0015 18.4 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|300709980|ref|YP_003735794.1| - 4.8e-05 23.0 0.3 9.5e-05 22.1 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|300709980|ref|YP_003735794.1| - 0.00039 21.0 0.0 0.00061 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300709980|ref|YP_003735794.1| - 0.0024 17.8 0.1 0.0047 16.8 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase DUF4162 PF13732.6 gi|300709980|ref|YP_003735794.1| - 0.0043 17.7 0.0 0.01 16.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) SMC_N PF02463.19 gi|300709980|ref|YP_003735794.1| - 0.012 15.1 0.1 0.17 11.3 0.1 2.2 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|300709980|ref|YP_003735794.1| - 0.019 15.1 1.4 0.062 13.4 0.6 2.4 1 1 1 2 2 2 0 50S ribosome-binding GTPase AAA_15 PF13175.6 gi|300709980|ref|YP_003735794.1| - 0.02 14.6 0.0 0.56 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_16 PF13191.6 gi|300709980|ref|YP_003735794.1| - 0.027 14.8 0.1 0.059 13.7 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain Sucrose_synth PF00862.19 gi|300709980|ref|YP_003735794.1| - 0.031 12.6 0.0 0.039 12.3 0.0 1.1 1 0 0 1 1 1 0 Sucrose synthase AAA PF00004.29 gi|300709980|ref|YP_003735794.1| - 0.045 14.2 0.0 0.32 11.4 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|300709980|ref|YP_003735794.1| - 0.086 13.1 0.1 0.48 10.7 0.1 2.1 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|300709980|ref|YP_003735794.1| - 0.11 11.9 0.1 0.21 10.9 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Thymidylate_kin PF02223.17 gi|300709980|ref|YP_003735794.1| - 0.19 11.4 0.1 4.2 7.0 0.0 2.4 3 0 0 3 3 3 0 Thymidylate kinase ABC2_membrane PF01061.24 gi|300709981|ref|YP_003735795.1| - 1.1e-39 136.0 16.5 1.6e-39 135.5 16.5 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|300709981|ref|YP_003735795.1| - 2.3e-20 73.0 21.1 2.3e-20 73.0 21.1 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|300709981|ref|YP_003735795.1| - 6.4e-09 35.5 23.0 1.4e-08 34.4 23.0 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|300709981|ref|YP_003735795.1| - 0.021 14.8 12.5 0.011 15.7 9.4 2.1 2 1 0 2 2 2 0 ABC-2 family transporter protein Herpes_LMP1 PF05297.11 gi|300709981|ref|YP_003735795.1| - 0.21 10.7 5.2 0.27 10.4 5.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ABC2_membrane_5 PF13346.6 gi|300709981|ref|YP_003735795.1| - 0.58 9.7 13.8 1.4 8.4 13.8 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein TAT_signal PF10518.9 gi|300709982|ref|YP_003735796.1| - 0.015 15.2 0.5 0.024 14.5 0.5 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence SnoaL PF07366.12 gi|300709983|ref|YP_003735797.1| - 2e-29 102.0 0.0 2.3e-29 101.7 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|300709983|ref|YP_003735797.1| - 6.3e-19 68.5 0.0 7.8e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|300709983|ref|YP_003735797.1| - 1.1e-05 25.8 0.0 1.6e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 gi|300709983|ref|YP_003735797.1| - 0.13 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain TctC PF03401.14 gi|300709984|ref|YP_003735798.1| - 3.4e-56 190.3 0.0 3.8e-56 190.1 0.0 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor TctB PF07331.11 gi|300709985|ref|YP_003735799.1| - 2e-20 73.4 16.6 2.6e-20 73.1 16.6 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family TctA PF01970.16 gi|300709986|ref|YP_003735800.1| - 2.7e-134 448.0 41.8 3.3e-134 447.7 41.8 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family FmdA_AmdA PF03069.15 gi|300709987|ref|YP_003735801.1| - 1.8e-29 102.8 0.3 2.2e-19 69.6 0.2 2.7 1 1 1 2 2 2 2 Acetamidase/Formamidase family ANTAR PF03861.14 gi|300709987|ref|YP_003735801.1| - 0.0059 16.4 0.0 0.0098 15.7 0.0 1.3 1 0 0 1 1 1 1 ANTAR domain Epimerase PF01370.21 gi|300709989|ref|YP_003735803.1| - 5.3e-53 180.0 0.0 6.2e-53 179.7 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300709989|ref|YP_003735803.1| - 3.8e-43 148.1 0.0 4.9e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|300709989|ref|YP_003735803.1| - 1.2e-14 54.1 0.0 1.5e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|300709989|ref|YP_003735803.1| - 2.8e-14 52.9 0.0 3.4e-13 49.4 0.0 2.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|300709989|ref|YP_003735803.1| - 2.1e-13 50.6 0.0 3.2e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|300709989|ref|YP_003735803.1| - 2.5e-11 43.2 0.0 3.2e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|300709989|ref|YP_003735803.1| - 6.1e-09 35.4 0.3 0.0012 18.0 0.0 2.8 1 1 1 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|300709989|ref|YP_003735803.1| - 3.9e-05 23.2 0.3 0.027 13.9 0.0 2.8 2 1 0 2 2 2 2 short chain dehydrogenase NmrA PF05368.13 gi|300709989|ref|YP_003735803.1| - 9e-05 22.1 0.0 0.00073 19.2 0.1 2.0 2 0 0 2 2 2 1 NmrA-like family TrkA_N PF02254.18 gi|300709989|ref|YP_003735803.1| - 0.00027 21.2 0.1 0.00055 20.2 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_17 PF12692.7 gi|300709989|ref|YP_003735803.1| - 0.014 15.4 0.0 0.044 13.8 0.0 1.8 2 0 0 2 2 2 0 S-adenosyl-L-methionine methyltransferase KR PF08659.10 gi|300709989|ref|YP_003735803.1| - 0.015 15.2 0.1 0.071 13.0 0.2 2.1 2 1 0 2 2 2 0 KR domain NAD_binding_7 PF13241.6 gi|300709989|ref|YP_003735803.1| - 0.034 14.6 0.0 0.059 13.8 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Methyltransf_25 PF13649.6 gi|300709990|ref|YP_003735804.1| - 1.3e-16 61.1 0.0 2.2e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300709990|ref|YP_003735804.1| - 1.1e-15 58.1 0.0 1.8e-15 57.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300709990|ref|YP_003735804.1| - 3.5e-10 39.9 0.0 5e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300709990|ref|YP_003735804.1| - 5.8e-10 39.3 0.0 9.5e-10 38.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|300709990|ref|YP_003735804.1| - 1.7e-09 37.6 0.0 2.4e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|300709990|ref|YP_003735804.1| - 6.8e-09 36.4 0.0 1e-08 35.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF938 PF06080.12 gi|300709990|ref|YP_003735804.1| - 0.00045 20.0 0.0 0.00066 19.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF938) Methyltransf_9 PF08003.11 gi|300709990|ref|YP_003735804.1| - 0.0021 17.0 0.0 0.0028 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_24 PF13578.6 gi|300709990|ref|YP_003735804.1| - 0.0089 17.0 0.1 0.018 16.0 0.1 1.6 2 0 0 2 2 2 1 Methyltransferase domain Pox_MCEL PF03291.16 gi|300709990|ref|YP_003735804.1| - 0.014 14.5 0.0 0.015 14.4 0.0 1.1 1 0 0 1 1 1 0 mRNA capping enzyme TehB PF03848.14 gi|300709990|ref|YP_003735804.1| - 0.019 14.3 0.0 0.05 13.0 0.0 1.8 1 1 0 1 1 1 0 Tellurite resistance protein TehB CMAS PF02353.20 gi|300709990|ref|YP_003735804.1| - 0.052 12.8 0.0 0.065 12.5 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MatE PF01554.18 gi|300709992|ref|YP_003735806.1| - 7.9e-59 197.9 35.7 1.4e-32 112.6 16.4 2.4 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|300709992|ref|YP_003735806.1| - 0.0013 18.8 14.1 0.0013 18.8 14.1 5.1 4 2 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF3665 PF12427.8 gi|300709993|ref|YP_003735807.1| - 0.092 12.4 0.3 0.13 11.9 0.3 1.3 1 0 0 1 1 1 0 Branched-chain amino acid aminotransferase TetR_C_6 PF13977.6 gi|300709994|ref|YP_003735808.1| - 1.5e-17 63.8 6.0 1.5e-17 63.8 6.0 1.5 2 0 0 2 2 2 1 BetI-type transcriptional repressor, C-terminal TetR_N PF00440.23 gi|300709994|ref|YP_003735808.1| - 3.1e-10 39.7 0.6 6.4e-10 38.7 0.6 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_24 PF17932.1 gi|300709994|ref|YP_003735808.1| - 1.5e-07 31.7 0.8 3.2e-07 30.6 0.3 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_27 PF17935.1 gi|300709994|ref|YP_003735808.1| - 4.5e-05 23.5 0.5 0.00011 22.2 0.3 2.0 1 1 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_4 PF08359.11 gi|300709994|ref|YP_003735808.1| - 0.0027 17.8 0.1 0.0041 17.3 0.1 1.3 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region TetR_C_31 PF17940.1 gi|300709994|ref|YP_003735808.1| - 0.0069 16.6 7.6 0.0069 16.6 7.6 2.0 2 1 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_17 PF17922.1 gi|300709994|ref|YP_003735808.1| - 0.058 13.5 0.1 0.11 12.5 0.0 1.6 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_29 PF17938.1 gi|300709994|ref|YP_003735808.1| - 0.066 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_37 PF18665.1 gi|300709994|ref|YP_003735808.1| - 0.07 13.7 0.0 0.21 12.2 0.0 1.7 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PPDK_N PF01326.19 gi|300709995|ref|YP_003735809.1| - 1.2e-84 284.4 0.0 1.9e-84 283.7 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|300709995|ref|YP_003735809.1| - 1.1e-21 76.3 0.1 2.9e-21 74.9 0.1 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain FKBP_C PF00254.28 gi|300709996|ref|YP_003735810.1| - 1.8e-21 76.2 0.7 4.7e-21 74.9 0.7 1.9 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase CopK PF11525.8 gi|300709996|ref|YP_003735810.1| - 0.069 12.8 1.5 1.4 8.6 0.1 2.3 1 1 1 2 2 2 0 Copper resistance protein K YajC PF02699.15 gi|300709996|ref|YP_003735810.1| - 0.11 12.4 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Preprotein translocase subunit MFS_1 PF07690.16 gi|300709997|ref|YP_003735811.1| - 3e-42 144.8 39.9 3e-42 144.8 39.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|300709997|ref|YP_003735811.1| - 1.1e-06 27.7 15.1 1.8e-05 23.8 5.8 2.6 1 1 0 2 2 2 2 MFS_1 like family LacY_symp PF01306.19 gi|300709997|ref|YP_003735811.1| - 1.8e-06 27.0 13.2 7.5e-06 25.0 2.0 2.9 2 1 1 3 3 3 2 LacY proton/sugar symporter Nuc_H_symport PF03825.16 gi|300709997|ref|YP_003735811.1| - 0.0012 17.9 11.1 0.11 11.4 1.0 2.4 1 1 1 2 2 2 2 Nucleoside H+ symporter OATP PF03137.20 gi|300709997|ref|YP_003735811.1| - 0.0018 16.6 8.3 0.0062 14.9 0.0 2.9 3 0 0 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family Sugar_tr PF00083.24 gi|300709997|ref|YP_003735811.1| - 0.0087 15.0 25.6 0.024 13.5 9.4 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 gi|300709997|ref|YP_003735811.1| - 0.23 10.7 31.1 0.46 9.7 31.1 1.8 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB HTH_10 PF04967.12 gi|300709998|ref|YP_003735812.1| - 2.1e-21 75.5 0.1 3.7e-21 74.7 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|300709998|ref|YP_003735812.1| - 9.5e-06 25.1 0.1 1.9e-05 24.2 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Tnp_1_2 PF13022.6 gi|300709998|ref|YP_003735812.1| - 0.0011 19.1 0.0 0.0026 17.9 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase HTH_11 PF08279.12 gi|300709998|ref|YP_003735812.1| - 0.0014 18.5 0.1 0.0036 17.2 0.1 1.7 1 0 0 1 1 1 1 HTH domain BAT PF15915.5 gi|300709998|ref|YP_003735812.1| - 0.0016 18.3 0.2 0.0025 17.7 0.2 1.3 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_3 PF01381.22 gi|300709998|ref|YP_003735812.1| - 0.003 17.6 0.0 0.0065 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_22 PF13309.6 gi|300709998|ref|YP_003735812.1| - 0.0048 16.9 0.0 0.065 13.3 0.0 2.4 2 0 0 2 2 2 1 HTH domain HTH_8 PF02954.19 gi|300709998|ref|YP_003735812.1| - 0.0069 16.2 0.3 0.083 12.7 0.1 2.4 1 1 1 2 2 2 1 Bacterial regulatory protein, Fis family HTH_17 PF12728.7 gi|300709998|ref|YP_003735812.1| - 0.013 15.7 0.2 0.29 11.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|300709998|ref|YP_003735812.1| - 0.015 15.1 0.1 0.031 14.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_26 PF13443.6 gi|300709998|ref|YP_003735812.1| - 0.017 15.5 0.0 0.035 14.5 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_Crp_2 PF13545.6 gi|300709998|ref|YP_003735812.1| - 0.02 14.9 0.3 0.22 11.5 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DUF134 PF02001.16 gi|300709998|ref|YP_003735812.1| - 0.021 15.4 0.0 0.035 14.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF134 GerE PF00196.19 gi|300709998|ref|YP_003735812.1| - 0.025 14.1 0.1 0.14 11.8 0.1 2.3 1 1 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_5 PF01022.20 gi|300709998|ref|YP_003735812.1| - 0.033 14.1 0.1 0.075 12.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 gi|300709998|ref|YP_003735812.1| - 0.051 13.5 0.0 0.097 12.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|300709998|ref|YP_003735812.1| - 0.075 12.9 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain GntR PF00392.21 gi|300709998|ref|YP_003735812.1| - 0.079 12.6 0.0 0.3 10.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|300709998|ref|YP_003735812.1| - 0.094 12.9 0.0 1.8 8.8 0.0 2.3 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain YdaS_antitoxin PF15943.5 gi|300709998|ref|YP_003735812.1| - 0.094 12.6 0.9 2.6 8.0 0.0 2.6 3 0 0 3 3 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_50 PF18024.1 gi|300709998|ref|YP_003735812.1| - 0.095 12.3 0.4 1.2 8.8 0.2 2.4 1 1 1 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|300709998|ref|YP_003735812.1| - 0.11 12.5 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_30 PF13556.6 gi|300709998|ref|YP_003735812.1| - 0.19 11.6 0.4 0.19 11.6 0.4 2.0 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Hydantoinase_A PF01968.18 gi|300709999|ref|YP_003735813.1| - 2.2e-97 325.9 10.2 7.9e-97 324.0 2.9 2.6 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|300709999|ref|YP_003735813.1| - 1.6e-49 168.0 2.1 3.5e-47 160.4 0.1 2.4 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|300709999|ref|YP_003735813.1| - 1.3e-05 24.0 5.4 0.0089 14.7 0.5 2.2 2 0 0 2 2 2 2 MutL protein FtsA PF14450.6 gi|300709999|ref|YP_003735813.1| - 0.00078 19.8 0.5 1.9 8.9 0.0 2.6 2 0 0 2 2 2 2 Cell division protein FtsA BcrAD_BadFG PF01869.20 gi|300709999|ref|YP_003735813.1| - 0.0021 17.6 0.7 0.073 12.6 0.1 2.4 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family ALF PF03752.13 gi|300709999|ref|YP_003735813.1| - 0.065 13.2 0.5 0.18 11.8 0.5 1.8 1 0 0 1 1 1 0 Short repeats of unknown function ROK PF00480.20 gi|300709999|ref|YP_003735813.1| - 0.23 10.9 0.1 0.23 10.9 0.1 2.2 3 0 0 3 3 3 0 ROK family Ppx-GppA PF02541.16 gi|300709999|ref|YP_003735813.1| - 0.24 10.8 1.8 0.32 10.4 0.4 1.8 2 0 0 2 2 2 0 Ppx/GppA phosphatase family Hydantoinase_B PF02538.14 gi|300710000|ref|YP_003735814.1| - 1.9e-134 448.9 0.0 2.2e-134 448.7 0.0 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Isochorismatase PF00857.20 gi|300710001|ref|YP_003735815.1| - 2.1e-36 125.7 0.2 2.4e-36 125.5 0.2 1.0 1 0 0 1 1 1 1 Isochorismatase family PEP_mutase PF13714.6 gi|300710002|ref|YP_003735816.1| - 5.4e-50 170.1 0.2 6.4e-50 169.8 0.2 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|300710002|ref|YP_003735816.1| - 5.4e-16 58.2 0.2 9.4e-16 57.4 0.2 1.3 1 0 0 1 1 1 1 Isocitrate lyase family Pantoate_transf PF02548.15 gi|300710002|ref|YP_003735816.1| - 0.064 12.6 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate hydroxymethyltransferase CarboxypepD_reg PF13620.6 gi|300710003|ref|YP_003735817.1| - 5.7e-06 26.5 8.3 1.1e-05 25.5 0.0 3.5 3 1 1 4 4 4 2 Carboxypeptidase regulatory-like domain Beta_helix PF13229.6 gi|300710004|ref|YP_003735818.1| - 0.012 15.5 1.7 0.061 13.2 1.7 2.0 1 1 0 1 1 1 0 Right handed beta helix region CHRD PF07452.12 gi|300710006|ref|YP_003735820.1| - 8.9e-16 58.9 0.0 1e-15 58.7 0.0 1.1 1 0 0 1 1 1 1 CHRD domain Lactamase_B_2 PF12706.7 gi|300710007|ref|YP_003735821.1| - 2.4e-22 79.4 0.0 2.9e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300710007|ref|YP_003735821.1| - 1.5e-17 64.3 0.7 3.3e-17 63.2 0.2 1.7 1 1 1 2 2 2 1 Metallo-beta-lactamase superfamily DUF1918 PF08940.11 gi|300710007|ref|YP_003735821.1| - 0.037 13.7 0.0 0.14 11.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1918) Lactamase_B_6 PF16661.5 gi|300710007|ref|YP_003735821.1| - 0.068 12.6 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain PDEase_II PF02112.15 gi|300710007|ref|YP_003735821.1| - 0.14 11.3 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II SBP_bac_6 PF13343.6 gi|300710008|ref|YP_003735822.1| - 4.4e-23 82.0 0.0 6.1e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|300710008|ref|YP_003735822.1| - 3.6e-15 56.5 0.0 5.3e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|300710008|ref|YP_003735822.1| - 2.3e-10 40.6 0.0 3.6e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|300710008|ref|YP_003735822.1| - 5.2e-08 33.2 0.0 7.1e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein TAT_signal PF10518.9 gi|300710008|ref|YP_003735822.1| - 0.0095 15.7 1.5 0.02 14.8 1.5 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 gi|300710009|ref|YP_003735823.1| - 2.4e-30 105.7 29.4 7.4e-18 64.9 12.9 3.0 4 0 0 4 4 4 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|300710010|ref|YP_003735824.1| - 1e-31 110.2 0.0 1.6e-31 109.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|300710010|ref|YP_003735824.1| - 1.1e-12 47.9 3.5 3.5e-12 46.3 0.1 3.1 3 1 0 3 3 3 1 TOBE domain AAA_21 PF13304.6 gi|300710010|ref|YP_003735824.1| - 2e-07 31.1 0.0 0.00011 22.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 gi|300710010|ref|YP_003735824.1| - 0.00018 21.7 0.4 0.0076 16.5 0.0 3.2 3 0 0 3 3 3 1 TOBE domain ABC_ATPase PF09818.9 gi|300710010|ref|YP_003735824.1| - 0.003 16.4 0.3 0.33 9.7 0.0 2.8 2 1 0 2 2 2 1 Predicted ATPase of the ABC class CysA_C_terminal PF17850.1 gi|300710010|ref|YP_003735824.1| - 0.0082 16.7 0.5 0.59 10.8 0.1 3.1 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA PF00004.29 gi|300710010|ref|YP_003735824.1| - 0.0085 16.5 0.1 0.39 11.1 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|300710010|ref|YP_003735824.1| - 0.012 15.9 0.0 0.05 13.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|300710010|ref|YP_003735824.1| - 0.026 14.1 0.2 0.12 11.9 0.2 2.2 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|300710010|ref|YP_003735824.1| - 0.029 13.8 0.0 0.67 9.3 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Rad17 PF03215.15 gi|300710010|ref|YP_003735824.1| - 0.073 13.0 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain Mg_chelatase PF01078.21 gi|300710010|ref|YP_003735824.1| - 0.074 12.4 0.0 0.17 11.3 0.0 1.6 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI TniB PF05621.11 gi|300710010|ref|YP_003735824.1| - 0.08 12.3 0.0 0.67 9.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 gi|300710010|ref|YP_003735824.1| - 0.12 12.8 2.0 0.56 10.6 2.0 2.3 1 1 0 1 1 1 0 AAA ATPase domain GFO_IDH_MocA PF01408.22 gi|300710011|ref|YP_003735825.1| - 2.5e-21 76.7 0.0 5e-21 75.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|300710011|ref|YP_003735825.1| - 0.00072 19.5 0.0 0.0022 18.0 0.0 1.9 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain MgtE PF01769.16 gi|300710012|ref|YP_003735826.1| - 2.8e-26 92.3 9.3 2.8e-26 92.3 9.3 1.7 2 0 0 2 2 2 1 Divalent cation transporter MgtE_N PF03448.17 gi|300710012|ref|YP_003735826.1| - 8.6e-15 55.2 0.4 8.6e-15 55.2 0.4 1.8 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.28 gi|300710012|ref|YP_003735826.1| - 7.4e-08 32.7 1.9 0.0033 17.8 0.1 2.8 2 0 0 2 2 2 2 CBS domain FliG_C PF01706.16 gi|300710012|ref|YP_003735826.1| - 0.056 13.6 0.1 0.12 12.6 0.1 1.5 1 0 0 1 1 1 0 FliG C-terminal domain Adenosine_kin PF04008.14 gi|300710012|ref|YP_003735826.1| - 0.059 13.1 0.2 0.13 12.1 0.2 1.5 1 0 0 1 1 1 0 Adenosine specific kinase UreF PF01730.16 gi|300710013|ref|YP_003735827.1| - 8.1e-30 104.1 0.6 1e-29 103.8 0.6 1.1 1 0 0 1 1 1 1 UreF UreE_C PF05194.12 gi|300710014|ref|YP_003735828.1| - 7.4e-11 42.4 2.1 1.4e-10 41.5 2.1 1.5 1 0 0 1 1 1 1 UreE urease accessory protein, C-terminal domain UreE_N PF02814.15 gi|300710014|ref|YP_003735828.1| - 8.5e-11 41.3 2.5 1.5e-10 40.5 2.5 1.4 1 0 0 1 1 1 1 UreE urease accessory protein, N-terminal domain UreD PF01774.17 gi|300710015|ref|YP_003735829.1| - 7.5e-46 156.7 0.1 9.7e-46 156.4 0.1 1.1 1 0 0 1 1 1 1 UreD urease accessory protein cobW PF02492.19 gi|300710016|ref|YP_003735830.1| - 9.5e-30 103.5 0.0 1.1e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|300710016|ref|YP_003735830.1| - 1.8e-09 37.0 0.3 0.00032 19.8 0.0 2.0 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|300710016|ref|YP_003735830.1| - 1.1e-05 25.3 0.1 3.1e-05 23.9 0.1 1.8 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|300710016|ref|YP_003735830.1| - 0.0074 16.8 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300710016|ref|YP_003735830.1| - 0.0084 16.0 0.0 3.1 7.7 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase NTPase_1 PF03266.15 gi|300710016|ref|YP_003735830.1| - 0.0089 15.9 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 NTPase ATPase_2 PF01637.18 gi|300710016|ref|YP_003735830.1| - 0.02 14.8 0.0 0.028 14.3 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea SRP54 PF00448.22 gi|300710016|ref|YP_003735830.1| - 0.037 13.7 0.0 0.07 12.7 0.0 1.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|300710016|ref|YP_003735830.1| - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|300710016|ref|YP_003735830.1| - 0.11 12.9 0.0 0.17 12.3 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|300710016|ref|YP_003735830.1| - 0.19 11.6 0.3 0.53 10.2 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_PrkA PF08298.11 gi|300710016|ref|YP_003735830.1| - 0.21 10.4 0.0 0.31 9.9 0.0 1.2 1 0 0 1 1 1 0 PrkA AAA domain Urease_gamma PF00547.18 gi|300710017|ref|YP_003735831.1| - 7e-43 145.0 0.0 7.8e-43 144.8 0.0 1.0 1 0 0 1 1 1 1 Urease, gamma subunit Svf1_C PF17187.4 gi|300710017|ref|YP_003735831.1| - 0.05 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain Amidohydro_1 PF01979.20 gi|300710018|ref|YP_003735832.1| - 2.1e-65 221.3 0.2 2.8e-65 220.9 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 gi|300710018|ref|YP_003735832.1| - 2e-47 160.5 1.0 4e-47 159.5 1.0 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 gi|300710018|ref|YP_003735832.1| - 4e-06 26.6 6.6 0.00059 19.4 0.0 2.8 3 1 0 3 3 3 2 Amidohydrolase family Urease_beta PF00699.20 gi|300710019|ref|YP_003735833.1| - 2.6e-43 146.0 0.0 3.2e-43 145.7 0.0 1.1 1 0 0 1 1 1 1 Urease beta subunit Peripla_BP_6 PF13458.6 gi|300710021|ref|YP_003735835.1| - 4.9e-80 269.8 0.0 6e-80 269.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Peripla_BP_5 PF13433.6 gi|300710021|ref|YP_003735835.1| - 9.8e-78 261.7 0.0 1.2e-77 261.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain ANF_receptor PF01094.28 gi|300710021|ref|YP_003735835.1| - 0.001 18.2 0.0 0.0023 17.1 0.0 1.4 1 1 0 1 1 1 1 Receptor family ligand binding region UCR_Fe-S_N PF10399.9 gi|300710021|ref|YP_003735835.1| - 1 8.7 3.5 1.6 8.1 2.6 1.7 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BPD_transp_2 PF02653.16 gi|300710022|ref|YP_003735836.1| - 8.1e-35 120.3 40.8 1e-34 119.9 40.8 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|300710023|ref|YP_003735837.1| - 6.3e-32 110.8 39.7 8.3e-32 110.4 39.7 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 gi|300710024|ref|YP_003735838.1| - 1.2e-30 106.9 0.0 1.6e-30 106.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710024|ref|YP_003735838.1| - 1.1e-09 38.6 4.6 0.00014 21.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 gi|300710024|ref|YP_003735838.1| - 4.3e-05 23.3 0.0 7.1e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter SMC_N PF02463.19 gi|300710024|ref|YP_003735838.1| - 6.1e-05 22.6 0.3 0.00029 20.4 0.3 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300710024|ref|YP_003735838.1| - 0.00068 19.3 0.1 0.0013 18.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|300710024|ref|YP_003735838.1| - 0.00094 19.5 0.0 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|300710024|ref|YP_003735838.1| - 0.0019 18.0 0.0 0.004 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300710024|ref|YP_003735838.1| - 0.0034 17.3 0.0 0.0065 16.4 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|300710024|ref|YP_003735838.1| - 0.011 16.1 0.5 0.02 15.3 0.5 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|300710024|ref|YP_003735838.1| - 0.015 15.8 0.5 0.032 14.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|300710024|ref|YP_003735838.1| - 0.039 13.7 0.0 0.079 12.7 0.0 1.4 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1 PF01926.23 gi|300710024|ref|YP_003735838.1| - 0.039 14.0 0.0 0.092 12.8 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|300710024|ref|YP_003735838.1| - 0.087 12.1 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin MukB PF04310.12 gi|300710024|ref|YP_003735838.1| - 0.097 12.5 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 MukB N-terminal AAA_28 PF13521.6 gi|300710024|ref|YP_003735838.1| - 0.16 12.2 0.4 0.43 10.8 0.0 1.9 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|300710024|ref|YP_003735838.1| - 0.18 11.9 0.2 0.79 9.9 0.0 2.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 gi|300710025|ref|YP_003735839.1| - 5.2e-31 108.0 0.0 7.6e-31 107.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710025|ref|YP_003735839.1| - 2.9e-08 33.9 0.1 0.0035 17.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MukB PF04310.12 gi|300710025|ref|YP_003735839.1| - 0.00016 21.5 0.1 0.00033 20.5 0.1 1.4 1 0 0 1 1 1 1 MukB N-terminal AAA_29 PF13555.6 gi|300710025|ref|YP_003735839.1| - 0.0027 17.4 0.1 0.0048 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MeaB PF03308.16 gi|300710025|ref|YP_003735839.1| - 0.0059 15.6 0.2 0.0092 15.0 0.2 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|300710025|ref|YP_003735839.1| - 0.0082 15.9 0.5 0.017 14.9 0.1 1.6 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 gi|300710025|ref|YP_003735839.1| - 0.0091 15.9 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 gi|300710025|ref|YP_003735839.1| - 0.038 14.5 0.1 0.057 13.9 0.1 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|300710025|ref|YP_003735839.1| - 0.048 13.7 0.0 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase NB-ARC PF00931.22 gi|300710025|ref|YP_003735839.1| - 0.05 12.8 0.9 0.094 11.9 0.9 1.3 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|300710025|ref|YP_003735839.1| - 0.054 13.4 0.2 0.086 12.7 0.2 1.3 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 gi|300710025|ref|YP_003735839.1| - 0.064 12.7 0.1 0.46 9.9 0.0 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain cobW PF02492.19 gi|300710025|ref|YP_003735839.1| - 0.081 12.5 0.3 0.14 11.7 0.3 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RecA PF00154.21 gi|300710025|ref|YP_003735839.1| - 0.092 12.2 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein AAA_22 PF13401.6 gi|300710025|ref|YP_003735839.1| - 0.1 12.9 0.0 0.34 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain DLIC PF05783.11 gi|300710025|ref|YP_003735839.1| - 0.11 11.4 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_24 PF13479.6 gi|300710025|ref|YP_003735839.1| - 0.16 11.6 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|300710025|ref|YP_003735839.1| - 0.18 9.3 0.7 0.24 8.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PRK PF00485.18 gi|300710025|ref|YP_003735839.1| - 0.22 11.3 0.2 1.5 8.5 0.1 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Cupin_2 PF07883.11 gi|300710026|ref|YP_003735840.1| - 2.9e-06 26.9 0.0 3.7e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Cupin domain Cupin_6 PF12852.7 gi|300710026|ref|YP_003735840.1| - 0.0083 15.9 0.0 0.0083 15.9 0.0 1.1 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|300710026|ref|YP_003735840.1| - 0.094 12.6 0.0 0.094 12.6 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF3100 PF11299.8 gi|300710027|ref|YP_003735841.1| - 3.9e-92 307.9 15.9 4.6e-92 307.7 15.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3100) Zn_Tnp_IS1595 PF12760.7 gi|300710029|ref|YP_003735843.1| - 8e-05 22.5 13.0 0.0067 16.4 1.4 2.3 2 0 0 2 2 2 2 Transposase zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|300710029|ref|YP_003735843.1| - 0.0061 16.2 10.1 0.15 11.8 0.2 3.2 3 0 0 3 3 3 2 DNA directed RNA polymerase, 7 kDa subunit Rubredoxin PF00301.20 gi|300710029|ref|YP_003735843.1| - 0.021 14.9 7.9 0.31 11.1 0.1 4.0 4 0 0 4 4 4 0 Rubredoxin zinc_ribbon_10 PF10058.9 gi|300710029|ref|YP_003735843.1| - 0.027 14.2 9.3 0.039 13.7 0.6 2.9 2 2 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein HypA PF01155.19 gi|300710029|ref|YP_003735843.1| - 0.049 13.6 7.4 22 5.1 7.4 2.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nudix_N_2 PF14803.6 gi|300710029|ref|YP_003735843.1| - 0.094 12.7 16.1 0.072 13.0 4.5 3.8 4 0 0 4 4 4 0 Nudix N-terminal zf-RRPl_C4 PF17026.5 gi|300710029|ref|YP_003735843.1| - 0.12 12.5 1.5 0.32 11.1 1.5 1.9 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF2752 PF10825.8 gi|300710029|ref|YP_003735843.1| - 0.28 11.3 1.3 1.5 8.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Ima1_N PF09779.9 gi|300710029|ref|YP_003735843.1| - 0.29 12.0 7.2 3.2 8.6 0.1 2.2 2 0 0 2 2 2 0 Ima1 N-terminal domain A2L_zn_ribbon PF08792.10 gi|300710029|ref|YP_003735843.1| - 0.42 10.4 3.9 22 4.9 3.1 3.0 2 1 0 2 2 2 0 A2L zinc ribbon domain Terminase_GpA PF05876.12 gi|300710029|ref|YP_003735843.1| - 0.78 8.2 12.6 0.28 9.7 0.5 2.1 1 1 1 2 2 2 0 Phage terminase large subunit (GpA) Zn_ribbon_SprT PF17283.2 gi|300710029|ref|YP_003735843.1| - 2.1 8.3 18.4 10 6.1 2.9 4.0 2 1 1 3 3 3 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300710029|ref|YP_003735843.1| - 2.4 7.7 12.7 14 5.2 0.1 3.3 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_L44 PF00935.19 gi|300710029|ref|YP_003735843.1| - 2.7 8.5 6.8 2.2 8.8 1.8 2.8 2 1 1 3 3 2 0 Ribosomal protein L44 zf-3CxxC PF13695.6 gi|300710029|ref|YP_003735843.1| - 3.6 8.1 10.1 0.52 10.8 1.1 2.5 1 1 1 2 2 2 0 Zinc-binding domain zf-LITAF-like PF10601.9 gi|300710029|ref|YP_003735843.1| - 4.2 7.7 15.1 15 6.0 0.2 4.0 2 2 2 4 4 4 0 LITAF-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|300710029|ref|YP_003735843.1| - 5.3 7.2 15.8 1.2 9.4 3.0 3.3 2 2 2 4 4 4 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 gi|300710029|ref|YP_003735843.1| - 5.7 6.8 19.4 1.1 9.1 0.4 4.2 4 0 0 4 4 4 0 Rubredoxin metal binding domain RNA_POL_M_15KD PF02150.16 gi|300710029|ref|YP_003735843.1| - 9 6.3 9.3 31 4.6 0.1 3.9 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit Abhydrolase_6 PF12697.7 gi|300710030|ref|YP_003735844.1| - 9.9e-10 39.4 9.5 9.9e-10 39.4 9.5 2.0 1 1 0 2 2 2 1 Alpha/beta hydrolase family DUF1100 PF06500.11 gi|300710030|ref|YP_003735844.1| - 1.1e-09 37.6 0.0 2.3e-09 36.6 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) Peptidase_S9 PF00326.21 gi|300710030|ref|YP_003735844.1| - 1.1e-06 28.3 0.0 0.028 13.9 0.0 2.6 2 0 0 2 2 2 2 Prolyl oligopeptidase family DLH PF01738.18 gi|300710030|ref|YP_003735844.1| - 4.3e-06 26.4 0.0 0.024 14.2 0.0 2.3 2 0 0 2 2 2 2 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|300710030|ref|YP_003735844.1| - 1.7e-05 24.2 0.0 3.7e-05 23.1 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|300710030|ref|YP_003735844.1| - 2.9e-05 24.1 0.0 6.9e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 gi|300710030|ref|YP_003735844.1| - 5.4e-05 23.0 0.0 0.48 10.0 0.4 2.8 1 1 0 2 2 2 2 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 gi|300710030|ref|YP_003735844.1| - 0.0044 16.6 0.0 0.027 14.1 0.0 2.3 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 gi|300710030|ref|YP_003735844.1| - 0.024 13.3 0.0 0.055 12.1 0.0 1.5 2 0 0 2 2 2 0 Acetyl xylan esterase (AXE1) UPF0227 PF05728.12 gi|300710030|ref|YP_003735844.1| - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Bac_luciferase PF00296.20 gi|300710031|ref|YP_003735845.1| - 3.6e-33 115.3 5.8 4.5e-33 115.0 5.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Iso_dh PF00180.20 gi|300710033|ref|YP_003735847.1| - 6.8e-81 272.1 0.0 8.2e-81 271.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase adh_short PF00106.25 gi|300710034|ref|YP_003735848.1| - 1.7e-27 96.1 0.0 1.2e-26 93.4 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300710034|ref|YP_003735848.1| - 1.5e-18 67.2 0.6 4.6e-18 65.6 0.6 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|300710034|ref|YP_003735848.1| - 5.2e-08 33.0 0.6 7.7e-08 32.4 0.6 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300710034|ref|YP_003735848.1| - 5.5e-08 32.6 0.1 1.3e-07 31.3 0.1 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300710034|ref|YP_003735848.1| - 0.0018 17.7 0.0 0.0023 17.4 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Aminotran_5 PF00266.19 gi|300710036|ref|YP_003735850.1| - 2e-34 119.1 0.0 2.4e-34 118.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|300710036|ref|YP_003735850.1| - 0.00014 20.6 0.0 0.00019 20.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|300710036|ref|YP_003735850.1| - 0.0056 16.0 0.0 0.0092 15.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|300710036|ref|YP_003735850.1| - 0.023 14.0 0.0 0.049 12.9 0.0 1.4 1 1 0 1 1 1 0 Beta-eliminating lyase Band_7_C PF16200.5 gi|300710036|ref|YP_003735850.1| - 0.17 12.0 0.1 6.6 6.9 0.0 2.8 3 0 0 3 3 3 0 C-terminal region of band_7 SHOCT PF09851.9 gi|300710037|ref|YP_003735851.1| - 0.0011 18.6 0.6 0.0011 18.6 0.6 1.9 1 1 1 2 2 2 1 Short C-terminal domain DUF1707 PF08044.11 gi|300710037|ref|YP_003735851.1| - 0.0071 16.4 2.0 0.01 15.9 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1707) VbhA PF18495.1 gi|300710037|ref|YP_003735851.1| - 0.034 14.0 4.8 0.05 13.5 3.7 1.9 1 1 1 2 2 2 0 Antitoxin VbhA adh_short_C2 PF13561.6 gi|300710038|ref|YP_003735852.1| - 1.2e-55 188.6 0.0 1.5e-55 188.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300710038|ref|YP_003735852.1| - 7.7e-45 152.7 0.0 9.2e-45 152.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300710038|ref|YP_003735852.1| - 5.3e-07 29.7 0.0 6.9e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300710038|ref|YP_003735852.1| - 0.0036 16.8 0.0 0.013 15.0 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 gi|300710038|ref|YP_003735852.1| - 0.026 13.8 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AIM24 PF01987.17 gi|300710039|ref|YP_003735853.1| - 1.2e-24 87.2 0.0 1.5e-24 86.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Big_9 PF17963.1 gi|300710039|ref|YP_003735853.1| - 0.92 10.3 5.5 2.6 8.9 3.3 2.6 2 1 0 2 2 2 0 Bacterial Ig domain SNARE_assoc PF09335.11 gi|300710040|ref|YP_003735854.1| - 2.1e-15 57.3 5.4 2.1e-15 57.3 5.4 2.2 2 1 0 2 2 2 1 SNARE associated Golgi protein PQQ_2 PF13360.6 gi|300710042|ref|YP_003735856.1| - 1e-27 97.3 19.5 1e-18 67.8 6.6 3.8 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.6 gi|300710042|ref|YP_003735856.1| - 2e-24 85.4 35.3 0.0014 19.0 3.1 8.4 6 2 1 7 7 7 7 PQQ-like domain PQQ PF01011.21 gi|300710042|ref|YP_003735856.1| - 8.7e-12 44.4 6.1 0.0019 18.0 0.0 6.5 6 0 0 6 6 6 4 PQQ enzyme repeat SUKH-4 PF14435.6 gi|300710042|ref|YP_003735856.1| - 0.075 13.1 3.0 1.2 9.2 0.2 2.7 2 1 1 3 3 3 0 SUKH-4 immunity protein Usp PF00582.26 gi|300710043|ref|YP_003735857.1| - 1.1e-08 35.7 1.0 1.8e-07 31.8 1.0 2.0 1 1 0 1 1 1 1 Universal stress protein family DUF4157 PF13699.6 gi|300710043|ref|YP_003735857.1| - 0.035 14.3 0.1 0.055 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) MFS_1 PF07690.16 gi|300710044|ref|YP_003735858.1| - 2e-41 142.1 82.7 5.3e-35 121.0 49.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 gi|300710044|ref|YP_003735858.1| - 0.0025 16.2 22.2 0.011 14.1 1.1 3.5 3 1 1 4 4 4 3 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 gi|300710044|ref|YP_003735858.1| - 0.0046 16.3 40.6 0.012 14.9 40.6 1.6 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Alpha-amylase PF00128.24 gi|300710045|ref|YP_003735859.1| - 9.1e-104 347.6 0.0 2.4e-103 346.3 0.0 1.6 2 0 0 2 2 2 1 Alpha amylase, catalytic domain DUF3459 PF11941.8 gi|300710045|ref|YP_003735859.1| - 4.2e-07 30.2 0.3 1.1e-06 28.8 0.3 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Malt_amylase_C PF16657.5 gi|300710045|ref|YP_003735859.1| - 4.9e-07 29.8 0.0 1.2e-06 28.6 0.0 1.7 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain Glyco_hydro_42C PF08533.10 gi|300710045|ref|YP_003735859.1| - 0.008 15.9 0.0 0.03 14.0 0.0 1.9 1 0 0 1 1 1 1 Beta-galactosidase C-terminal domain hDGE_amylase PF14701.6 gi|300710045|ref|YP_003735859.1| - 0.0097 15.0 0.0 0.015 14.4 0.0 1.1 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain Form_Nir_trans PF01226.17 gi|300710046|ref|YP_003735860.1| - 1.1e-42 146.0 16.3 1.4e-42 145.7 16.3 1.1 1 0 0 1 1 1 1 Formate/nitrite transporter Usp PF00582.26 gi|300710046|ref|YP_003735860.1| - 5.4e-15 56.1 6.6 7.2e-08 33.0 0.1 3.4 2 1 0 2 2 2 2 Universal stress protein family V-SNARE PF05008.15 gi|300710046|ref|YP_003735860.1| - 0.022 15.2 0.2 0.088 13.2 0.0 1.9 2 0 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus CrgA PF06781.12 gi|300710046|ref|YP_003735860.1| - 0.81 9.8 4.4 2.3 8.3 2.3 2.7 1 1 1 2 2 2 0 Cell division protein CrgA HTH_10 PF04967.12 gi|300710047|ref|YP_003735861.1| - 1.4e-17 63.2 0.0 2.2e-17 62.6 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300710047|ref|YP_003735861.1| - 3.5e-17 62.7 1.7 4e-17 62.5 0.5 1.6 2 0 0 2 2 2 1 GAF and HTH_10 associated domain UPF0122 PF04297.14 gi|300710047|ref|YP_003735861.1| - 0.0012 19.1 0.0 0.0022 18.2 0.0 1.4 1 0 0 1 1 1 1 Putative helix-turn-helix protein, YlxM / p13 like DUF3572 PF12096.8 gi|300710047|ref|YP_003735861.1| - 0.0062 16.7 0.0 0.034 14.4 0.0 2.2 3 0 0 3 3 3 1 Protein of unknown function (DUF3572) MarR_2 PF12802.7 gi|300710047|ref|YP_003735861.1| - 0.0098 15.8 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300710047|ref|YP_003735861.1| - 0.062 13.4 0.1 0.42 10.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain UDPG_MGDP_dh_N PF03721.14 gi|300710049|ref|YP_003735863.1| - 6.6e-51 172.5 0.0 1.1e-50 171.8 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|300710049|ref|YP_003735863.1| - 1.4e-37 127.7 0.0 2.4e-37 127.0 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|300710049|ref|YP_003735863.1| - 1.2e-27 96.3 0.1 4.1e-27 94.7 0.0 1.9 2 0 0 2 2 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3HCDH_N PF02737.18 gi|300710049|ref|YP_003735863.1| - 2.2e-07 31.0 0.0 5.2e-07 29.7 0.0 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|300710049|ref|YP_003735863.1| - 9.8e-05 22.4 0.0 0.00022 21.3 0.0 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|300710049|ref|YP_003735863.1| - 0.00014 22.4 0.3 0.00044 20.8 0.4 1.8 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|300710049|ref|YP_003735863.1| - 0.0002 20.7 0.1 0.00033 20.0 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|300710049|ref|YP_003735863.1| - 0.00021 21.0 0.0 0.00035 20.2 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 gi|300710049|ref|YP_003735863.1| - 0.0018 18.6 0.9 0.013 15.8 0.1 2.5 2 1 0 2 2 2 1 TrkA-N domain NAD_binding_2 PF03446.15 gi|300710049|ref|YP_003735863.1| - 0.027 14.6 0.1 0.38 10.9 0.0 2.6 3 1 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_8 PF13450.6 gi|300710049|ref|YP_003735863.1| - 0.036 14.3 0.1 0.13 12.5 0.1 2.1 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|300710049|ref|YP_003735863.1| - 0.037 13.3 0.1 0.065 12.5 0.1 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Rossmann-like PF10727.9 gi|300710049|ref|YP_003735863.1| - 0.037 13.9 1.3 0.49 10.3 0.2 2.6 2 0 0 2 2 2 0 Rossmann-like domain 2-Hacid_dh_C PF02826.19 gi|300710049|ref|YP_003735863.1| - 0.051 12.9 0.1 0.57 9.5 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300710049|ref|YP_003735863.1| - 0.059 14.0 0.6 4.1 8.0 0.0 3.8 4 1 0 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 gi|300710049|ref|YP_003735863.1| - 0.1 12.9 0.1 0.77 10.0 0.1 2.2 2 0 0 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DAO PF01266.24 gi|300710049|ref|YP_003735863.1| - 0.12 12.0 7.3 0.96 9.0 7.2 2.2 1 1 0 1 1 1 0 FAD dependent oxidoreductase Methyltransf_23 PF13489.6 gi|300710049|ref|YP_003735863.1| - 0.18 11.6 0.0 3.2 7.6 0.0 2.6 3 1 0 3 3 3 0 Methyltransferase domain Glyco_hydro_26 PF02156.15 gi|300710050|ref|YP_003735864.1| - 1.5e-17 64.0 2.9 2.1e-17 63.5 2.9 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 26 Epimerase PF01370.21 gi|300710052|ref|YP_003735866.1| - 3.1e-62 210.2 0.2 3.8e-62 209.9 0.2 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300710052|ref|YP_003735866.1| - 6e-58 196.8 0.0 1.4e-57 195.6 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|300710052|ref|YP_003735866.1| - 5.5e-23 81.4 0.0 8.1e-23 80.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|300710052|ref|YP_003735866.1| - 3.1e-18 65.9 1.2 5.8e-17 61.8 1.2 2.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|300710052|ref|YP_003735866.1| - 3.3e-17 62.5 0.9 4.1e-17 62.2 0.9 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|300710052|ref|YP_003735866.1| - 2.1e-11 43.5 0.9 6.4e-07 28.8 0.1 2.3 1 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|300710052|ref|YP_003735866.1| - 1e-09 38.6 0.9 1e-09 38.6 0.9 1.9 1 1 1 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 gi|300710052|ref|YP_003735866.1| - 2.7e-06 27.1 2.1 2e-05 24.3 1.0 2.0 2 0 0 2 2 2 1 NmrA-like family TrkA_N PF02254.18 gi|300710052|ref|YP_003735866.1| - 0.0049 17.1 3.7 0.0087 16.3 0.3 2.6 3 0 0 3 3 3 1 TrkA-N domain adh_short PF00106.25 gi|300710052|ref|YP_003735866.1| - 0.041 13.3 0.1 0.078 12.4 0.1 1.5 1 0 0 1 1 1 0 short chain dehydrogenase KR PF08659.10 gi|300710052|ref|YP_003735866.1| - 0.061 13.2 0.6 0.32 10.9 0.6 2.1 1 1 0 1 1 1 0 KR domain Ldh_1_N PF00056.23 gi|300710052|ref|YP_003735866.1| - 0.072 13.2 1.1 0.72 9.9 0.6 2.2 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Acetyltransf_6 PF13480.7 gi|300710053|ref|YP_003735867.1| - 2.1e-19 70.1 0.7 4.7e-19 69.0 0.3 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|300710053|ref|YP_003735867.1| - 4e-11 42.4 0.0 0.0021 17.0 0.0 3.0 3 0 0 3 3 3 3 FemAB family FemAB_like PF04339.12 gi|300710053|ref|YP_003735867.1| - 0.038 13.1 0.0 0.2 10.8 0.0 1.9 2 0 0 2 2 2 0 Peptidogalycan biosysnthesis/recognition zf-NADH-PPase PF09297.11 gi|300710053|ref|YP_003735867.1| - 0.048 13.3 0.2 0.077 12.7 0.2 1.3 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Glycos_transf_1 PF00534.20 gi|300710054|ref|YP_003735868.1| - 1.1e-23 83.7 0.0 1.9e-23 82.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300710054|ref|YP_003735868.1| - 8.4e-21 74.8 0.0 1.5e-20 74.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300710054|ref|YP_003735868.1| - 2.1e-09 37.6 1.1 2.4e-09 37.4 0.2 1.5 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300710054|ref|YP_003735868.1| - 4.8e-09 36.8 0.3 9e-09 36.0 0.3 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|300710054|ref|YP_003735868.1| - 1.7e-05 25.1 0.0 4.9e-05 23.7 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|300710054|ref|YP_003735868.1| - 0.00055 20.0 0.0 0.00094 19.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|300710055|ref|YP_003735869.1| - 4.5e-12 46.1 0.0 7.3e-12 45.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|300710055|ref|YP_003735869.1| - 1.2e-09 38.1 0.0 2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|300710055|ref|YP_003735869.1| - 6.8e-06 26.1 0.0 1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|300710055|ref|YP_003735869.1| - 0.11 12.0 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 DUF1616 PF07760.11 gi|300710056|ref|YP_003735870.1| - 2.6e-74 250.2 0.1 3e-74 250.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Beta_helix PF13229.6 gi|300710057|ref|YP_003735871.1| - 0.00047 20.0 6.7 0.0033 17.3 5.9 2.5 1 1 2 3 3 3 2 Right handed beta helix region NosD PF05048.13 gi|300710057|ref|YP_003735871.1| - 0.00055 19.3 2.6 0.0024 17.2 2.8 1.9 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) DUF2206 PF09971.9 gi|300710058|ref|YP_003735872.1| - 1.6e-86 290.5 0.8 2.4e-85 286.5 0.0 2.3 2 0 0 2 2 2 2 Predicted membrane protein (DUF2206) Polysacc_synt_C PF14667.6 gi|300710059|ref|YP_003735873.1| - 1.8e-21 76.7 19.6 1.8e-21 76.7 19.6 3.4 2 1 1 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|300710059|ref|YP_003735873.1| - 5.7e-17 61.9 12.4 5.7e-17 61.9 12.4 2.1 1 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|300710059|ref|YP_003735873.1| - 6.1e-11 42.2 14.8 6.1e-11 42.2 14.8 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein MatE PF01554.18 gi|300710059|ref|YP_003735873.1| - 1.3e-07 31.4 10.8 1.3e-07 31.4 10.8 3.3 3 1 0 3 3 3 1 MatE MurJ PF03023.14 gi|300710059|ref|YP_003735873.1| - 1.1e-06 27.6 17.1 1.1e-06 27.6 17.1 2.7 3 1 1 4 4 4 1 Lipid II flippase MurJ TMEM100 PF16311.5 gi|300710059|ref|YP_003735873.1| - 7.1 6.2 7.7 13 5.4 1.4 2.9 2 1 1 3 3 3 0 Transmembrane protein 100 APH PF01636.23 gi|300710060|ref|YP_003735874.1| - 1.5e-11 44.7 1.3 2.1e-11 44.2 1.3 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF3618 PF12277.8 gi|300710060|ref|YP_003735874.1| - 0.22 11.8 2.8 0.39 11.0 2.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3618) Polysacc_deac_1 PF01522.21 gi|300710061|ref|YP_003735875.1| - 3.9e-33 114.0 0.0 7.7e-33 113.0 0.0 1.5 2 0 0 2 2 2 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|300710061|ref|YP_003735875.1| - 0.034 13.3 0.0 0.05 12.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 KH_6 PF15985.5 gi|300710061|ref|YP_003735875.1| - 0.17 12.3 0.0 0.4 11.1 0.0 1.7 1 0 0 1 1 1 0 KH domain DUF3473 PF11959.8 gi|300710062|ref|YP_003735876.1| - 1.4e-34 118.9 0.0 2e-34 118.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.21 gi|300710062|ref|YP_003735876.1| - 4e-21 75.2 0.0 8.4e-21 74.1 0.0 1.5 2 0 0 2 2 2 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300710062|ref|YP_003735876.1| - 0.0044 16.7 0.0 0.0091 15.7 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) IBV_3B PF03622.13 gi|300710062|ref|YP_003735876.1| - 0.025 14.7 0.0 0.045 13.9 0.0 1.3 1 0 0 1 1 1 0 IBV 3B protein Glyco_hydro_57 PF03065.15 gi|300710062|ref|YP_003735876.1| - 0.088 12.0 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Glycos_transf_2 PF00535.26 gi|300710063|ref|YP_003735877.1| - 4.4e-26 91.7 0.1 6.5e-26 91.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300710063|ref|YP_003735877.1| - 3.1e-07 30.5 0.2 6.6e-07 29.4 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|300710063|ref|YP_003735877.1| - 4.7e-05 23.8 0.0 9.2e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 NTP_transf_3 PF12804.7 gi|300710063|ref|YP_003735877.1| - 0.0008 19.8 0.1 0.0012 19.2 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain HTH_10 PF04967.12 gi|300710064|ref|YP_003735878.1| - 2.6e-16 59.2 0.1 4.1e-16 58.5 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300710064|ref|YP_003735878.1| - 2.8e-13 50.1 0.5 2.8e-13 50.1 0.5 1.4 2 0 0 2 2 2 1 GAF and HTH_10 associated domain MarR_2 PF12802.7 gi|300710064|ref|YP_003735878.1| - 2e-06 27.6 0.2 3.8e-06 26.7 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|300710064|ref|YP_003735878.1| - 1.1e-05 24.8 0.4 2.2e-05 23.9 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300710064|ref|YP_003735878.1| - 0.0012 18.6 1.2 0.0026 17.6 1.2 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|300710064|ref|YP_003735878.1| - 0.0072 15.8 1.4 0.01 15.3 0.4 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|300710064|ref|YP_003735878.1| - 0.0092 15.9 0.3 0.026 14.5 0.2 1.8 2 0 0 2 2 2 1 HTH domain HTH_3 PF01381.22 gi|300710064|ref|YP_003735878.1| - 0.012 15.7 0.1 0.022 14.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix Sigma70_r4_2 PF08281.12 gi|300710064|ref|YP_003735878.1| - 0.013 15.2 0.5 0.048 13.3 0.5 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 MarR PF01047.22 gi|300710064|ref|YP_003735878.1| - 0.096 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 MarR family Phage_CI_repr PF07022.13 gi|300710064|ref|YP_003735878.1| - 0.15 12.2 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Response_reg PF00072.24 gi|300710065|ref|YP_003735879.1| - 1.5e-20 73.4 0.0 1.8e-20 73.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.11 gi|300710065|ref|YP_003735879.1| - 0.014 15.7 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ GAF_2 PF13185.6 gi|300710066|ref|YP_003735880.1| - 7.5e-08 32.8 5.3 1.9e-05 25.0 0.9 3.9 2 1 2 4 4 4 3 GAF domain HATPase_c PF02518.26 gi|300710066|ref|YP_003735880.1| - 2.3e-05 24.9 0.0 4.6e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_3 PF13492.6 gi|300710066|ref|YP_003735880.1| - 0.00024 21.4 0.0 0.0032 17.8 0.0 2.4 2 0 0 2 2 2 1 GAF domain HisKA PF00512.25 gi|300710066|ref|YP_003735880.1| - 0.035 14.1 0.1 0.084 12.9 0.1 1.7 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Lactamase_B PF00753.27 gi|300710067|ref|YP_003735881.1| - 2.6e-24 86.4 14.7 3.3e-24 86.0 14.7 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300710067|ref|YP_003735881.1| - 5.2e-06 26.1 3.2 5.5e-06 26.0 2.0 1.6 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Fe-ADH PF00465.19 gi|300710068|ref|YP_003735882.1| - 5.3e-95 318.3 0.2 6.3e-95 318.1 0.2 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|300710068|ref|YP_003735882.1| - 1.8e-12 47.5 0.4 2.3e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase NTP_transferase PF00483.23 gi|300710069|ref|YP_003735883.1| - 2.7e-41 141.8 0.0 3e-41 141.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|300710069|ref|YP_003735883.1| - 6.1e-16 59.2 0.0 7.1e-16 59.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|300710069|ref|YP_003735883.1| - 1.9e-05 24.5 0.0 2.8e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CBS PF00571.28 gi|300710070|ref|YP_003735884.1| - 9.2e-24 83.7 0.3 1e-11 45.1 0.0 2.1 2 0 0 2 2 2 2 CBS domain Glyco_hydro_6 PF01341.17 gi|300710070|ref|YP_003735884.1| - 0.051 13.3 0.1 0.069 12.9 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 6 CARDB PF07705.11 gi|300710073|ref|YP_003735887.1| - 5.4e-20 71.6 5.1 4.2e-07 30.2 0.8 3.3 3 0 0 3 3 3 3 CARDB DUF4981 PF16353.5 gi|300710073|ref|YP_003735887.1| - 6e-07 29.9 0.6 0.24 11.9 0.0 3.6 3 0 0 3 3 3 2 Domain of unknown function(DUF4981) DUF756 PF05506.12 gi|300710073|ref|YP_003735887.1| - 1.2e-05 26.1 4.6 1.4 9.9 0.0 4.2 5 0 0 5 5 4 3 Domain of unknown function (DUF756) 4HBT PF03061.22 gi|300710073|ref|YP_003735887.1| - 0.00021 21.6 9.4 0.32 11.4 0.6 3.8 3 0 0 3 3 3 2 Thioesterase superfamily Transglut_C PF00927.22 gi|300710073|ref|YP_003735887.1| - 0.0078 16.3 0.0 12 6.1 0.0 3.5 3 1 0 3 3 3 0 Transglutaminase family, C-terminal ig like domain fn3_5 PF06280.12 gi|300710073|ref|YP_003735887.1| - 0.01 16.5 5.3 1.4 9.7 0.2 4.2 4 1 0 4 4 4 0 Fn3-like domain DBB PF14545.6 gi|300710073|ref|YP_003735887.1| - 0.014 15.4 0.0 1.6 8.7 0.0 2.5 2 0 0 2 2 2 0 Dof, BCAP, and BANK (DBB) motif, DUF3872 PF12988.7 gi|300710073|ref|YP_003735887.1| - 0.016 15.0 0.1 7.5 6.4 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3872) TAT_signal PF10518.9 gi|300710073|ref|YP_003735887.1| - 0.02 14.7 0.1 0.081 12.8 0.1 2.1 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Cadherin PF00028.17 gi|300710073|ref|YP_003735887.1| - 0.022 15.2 0.2 0.44 11.0 0.0 3.0 3 0 0 3 3 3 0 Cadherin domain Fn3-like PF14310.6 gi|300710073|ref|YP_003735887.1| - 0.059 13.5 4.8 31 4.8 0.1 4.6 3 2 1 4 4 4 0 Fibronectin type III-like domain Cohesin PF00963.18 gi|300710073|ref|YP_003735887.1| - 0.1 12.8 2.7 1.2 9.3 0.0 3.0 3 0 0 3 3 3 0 Cohesin domain T6SS-SciN PF12790.7 gi|300710073|ref|YP_003735887.1| - 0.1 12.3 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 fn3_6 PF17766.1 gi|300710073|ref|YP_003735887.1| - 0.11 12.7 14.5 1.8 8.8 0.2 4.5 2 1 1 3 3 3 0 Fibronectin type-III domain PKD PF00801.20 gi|300710073|ref|YP_003735887.1| - 1.5 8.7 12.2 7 6.6 0.0 5.3 6 0 0 6 6 6 0 PKD domain HAD_2 PF13419.6 gi|300710074|ref|YP_003735888.1| - 2.8e-14 53.6 0.0 5.4e-14 52.7 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300710074|ref|YP_003735888.1| - 3.2e-07 30.8 0.0 4e-06 27.3 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710074|ref|YP_003735888.1| - 7.4e-05 22.7 0.0 0.00017 21.6 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Cofac_haem_bdg PF04187.13 gi|300710074|ref|YP_003735888.1| - 0.21 11.5 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Haem-binding uptake, Tiki superfamily, ChaN UCR_Fe-S_N PF10399.9 gi|300710075|ref|YP_003735889.1| - 0.038 13.3 0.3 0.083 12.3 0.3 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Lar_restr_allev PF14354.6 gi|300710076|ref|YP_003735890.1| - 0.058 13.8 1.0 0.11 12.9 0.1 1.8 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-tcix PF14952.6 gi|300710076|ref|YP_003735890.1| - 0.088 12.4 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding Pectate_lyase_3 PF12708.7 gi|300710077|ref|YP_003735891.1| - 0.0069 16.2 3.2 0.025 14.4 1.0 2.7 1 1 1 2 2 2 1 Pectate lyase superfamily protein TRAP-delta PF05404.12 gi|300710077|ref|YP_003735891.1| - 0.12 11.9 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Translocon-associated protein, delta subunit precursor (TRAP-delta) ExoD PF06055.12 gi|300710078|ref|YP_003735892.1| - 0.31 10.4 6.8 0.3 10.4 6.8 1.0 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD PGPGW PF09656.10 gi|300710078|ref|YP_003735892.1| - 0.42 10.1 15.0 0.83 9.2 15.0 1.5 1 1 0 1 1 1 0 Putative transmembrane protein (PGPGW) Gram_pos_anchor PF00746.21 gi|300710078|ref|YP_003735892.1| - 0.97 9.4 7.5 0.26 11.3 1.2 2.0 2 0 0 2 2 2 0 LPXTG cell wall anchor motif YdjM PF04307.14 gi|300710079|ref|YP_003735893.1| - 1.8e-12 46.9 5.5 2.3e-12 46.5 5.5 1.2 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase BioY PF02632.14 gi|300710079|ref|YP_003735893.1| - 0.074 13.1 6.7 0.45 10.6 1.3 2.3 2 0 0 2 2 2 0 BioY family SIS PF01380.22 gi|300710081|ref|YP_003735895.1| - 1.1e-53 180.5 0.1 6.2e-27 94.0 0.2 2.2 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|300710081|ref|YP_003735895.1| - 8.8e-21 74.5 0.0 1.8e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|300710081|ref|YP_003735895.1| - 3.7e-18 65.6 0.0 1e-17 64.2 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|300710081|ref|YP_003735895.1| - 0.056 13.5 0.4 0.98 9.4 0.0 2.5 2 0 0 2 2 2 0 SIS domain Fst_toxin PF13955.6 gi|300710081|ref|YP_003735895.1| - 0.14 12.1 0.0 0.31 11.0 0.0 1.6 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system NTP_transferase PF00483.23 gi|300710082|ref|YP_003735896.1| - 6.8e-19 68.4 0.0 8.1e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|300710082|ref|YP_003735896.1| - 2.1e-08 33.6 4.0 2.4e-05 23.9 0.6 4.9 3 1 3 6 6 6 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|300710082|ref|YP_003735896.1| - 2e-07 31.5 0.0 3.7e-07 30.6 0.0 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|300710082|ref|YP_003735896.1| - 0.056 12.4 0.0 0.082 11.8 0.0 1.2 1 0 0 1 1 1 0 L-fucokinase AMNp_N PF10423.9 gi|300710082|ref|YP_003735896.1| - 0.058 13.0 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus Hexapep_2 PF14602.6 gi|300710082|ref|YP_003735896.1| - 0.06 13.1 11.0 0.3 10.9 1.1 3.9 3 1 1 4 4 4 0 Hexapeptide repeat of succinyl-transferase SelR PF01641.18 gi|300710083|ref|YP_003735897.1| - 1.1e-53 180.4 0.3 1.3e-53 180.2 0.3 1.0 1 0 0 1 1 1 1 SelR domain zinc_ribbon_10 PF10058.9 gi|300710083|ref|YP_003735897.1| - 0.0002 21.0 0.6 0.17 11.6 0.1 2.4 2 0 0 2 2 2 2 Predicted integral membrane zinc-ribbon metal-binding protein Yippee-Mis18 PF03226.14 gi|300710083|ref|YP_003735897.1| - 0.029 14.6 0.1 0.078 13.2 0.1 1.7 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zf-LITAF-like PF10601.9 gi|300710083|ref|YP_003735897.1| - 0.055 13.8 0.2 13 6.2 0.3 2.3 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain HECT_2 PF09814.9 gi|300710083|ref|YP_003735897.1| - 0.069 12.0 0.0 6.4 5.5 0.0 2.0 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding TF_Zn_Ribbon PF08271.12 gi|300710083|ref|YP_003735897.1| - 0.13 11.8 11.1 0.2 11.2 0.3 3.6 3 1 0 3 3 3 0 TFIIB zinc-binding Endonuclease_7 PF02945.15 gi|300710083|ref|YP_003735897.1| - 1.4 8.9 4.4 1.3 8.9 1.7 2.0 1 1 1 2 2 2 0 Recombination endonuclease VII Syntaxin-6_N PF09177.11 gi|300710084|ref|YP_003735898.1| - 0.09 13.3 0.4 0.096 13.3 0.4 1.1 1 0 0 1 1 1 0 Syntaxin 6, N-terminal PKcGMP_CC PF16808.5 gi|300710084|ref|YP_003735898.1| - 0.22 11.4 6.9 0.43 10.5 0.3 2.4 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase RseC_MucC PF04246.12 gi|300710085|ref|YP_003735899.1| - 0.11 12.4 1.0 0.12 12.4 1.0 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF4131 PF13567.6 gi|300710085|ref|YP_003735899.1| - 0.94 9.1 5.4 1.3 8.7 5.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3742 PF12553.8 gi|300710085|ref|YP_003735899.1| - 4.4 7.4 8.1 0.38 10.9 2.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3742) DUF4184 PF13803.6 gi|300710086|ref|YP_003735900.1| - 0.017 14.9 0.1 0.017 14.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) DUF308 PF03729.13 gi|300710087|ref|YP_003735901.1| - 0.2 12.0 8.5 0.12 12.7 5.5 1.8 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) DUF2929 PF11151.8 gi|300710087|ref|YP_003735901.1| - 0.46 10.8 5.3 0.14 12.5 1.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2929) AsnC_trans_reg2 PF17805.1 gi|300710088|ref|YP_003735902.1| - 1.6e-43 146.7 0.1 8.7e-22 77.1 0.0 2.4 2 0 0 2 2 2 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|300710088|ref|YP_003735902.1| - 9.4e-12 44.6 2.4 3.8e-05 23.4 0.2 3.2 3 1 0 3 3 3 2 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|300710088|ref|YP_003735902.1| - 1.1e-05 24.8 0.1 0.05 13.2 0.0 2.8 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|300710088|ref|YP_003735902.1| - 0.00013 22.4 0.0 0.016 15.7 0.0 2.9 3 0 0 3 3 3 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|300710088|ref|YP_003735902.1| - 0.00017 21.4 1.3 0.028 14.3 0.1 2.9 3 0 0 3 3 3 2 MarR family TrmB PF01978.19 gi|300710088|ref|YP_003735902.1| - 0.053 13.4 0.0 5.8 6.9 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Glycos_transf_3 PF00591.21 gi|300710089|ref|YP_003735903.1| - 5.1e-32 111.5 0.0 6.7e-32 111.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|300710089|ref|YP_003735903.1| - 5.6e-09 35.7 0.2 4.1e-08 32.9 0.1 2.2 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain MlaC PF05494.12 gi|300710089|ref|YP_003735903.1| - 0.023 14.4 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 MlaC protein DUF455 PF04305.14 gi|300710089|ref|YP_003735903.1| - 0.12 12.0 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF455) GCS2 PF04107.13 gi|300710090|ref|YP_003735904.1| - 5e-14 52.3 0.4 1.2e-13 51.1 0.4 1.7 1 1 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) Amidoligase_2 PF12224.8 gi|300710090|ref|YP_003735904.1| - 0.15 11.7 0.0 0.54 9.9 0.0 2.0 1 1 0 1 1 1 0 Putative amidoligase enzyme AstE_AspA PF04952.14 gi|300710091|ref|YP_003735905.1| - 3.2e-38 131.5 0.1 3.7e-38 131.3 0.1 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Amidohydro_2 PF04909.14 gi|300710091|ref|YP_003735905.1| - 0.017 14.9 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase Peptidase_M14 PF00246.24 gi|300710091|ref|YP_003735905.1| - 0.023 14.5 0.0 0.12 12.2 0.0 2.0 2 1 0 2 2 2 0 Zinc carboxypeptidase Pro_isomerase PF00160.21 gi|300710092|ref|YP_003735906.1| - 3.5e-52 176.8 0.0 4e-52 176.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3830 PF12903.7 gi|300710092|ref|YP_003735906.1| - 0.16 11.7 0.1 0.42 10.3 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3830) DUF3784 PF12650.7 gi|300710093|ref|YP_003735907.1| - 6e-10 39.2 0.0 7.4e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3784) DUF1304 PF06993.12 gi|300710093|ref|YP_003735907.1| - 0.0011 18.9 0.3 0.0016 18.4 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1304) SecG PF03840.14 gi|300710093|ref|YP_003735907.1| - 0.069 13.2 2.5 0.081 13.0 0.2 2.1 2 1 0 2 2 2 0 Preprotein translocase SecG subunit DUF3040 PF11239.8 gi|300710093|ref|YP_003735907.1| - 4.9 7.5 13.2 0.26 11.6 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) Fer4_15 PF13459.6 gi|300710094|ref|YP_003735908.1| - 0.0017 19.1 0.5 0.0037 17.9 0.1 1.7 1 1 1 2 2 2 1 4Fe-4S single cluster domain HTH_10 PF04967.12 gi|300710095|ref|YP_003735909.1| - 2.8e-16 59.1 0.1 4e-16 58.6 0.1 1.2 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300710095|ref|YP_003735909.1| - 1.7e-13 50.7 1.4 1.7e-13 50.7 1.4 1.7 2 0 0 2 2 2 1 GAF and HTH_10 associated domain MarR_2 PF12802.7 gi|300710095|ref|YP_003735909.1| - 0.00019 21.3 0.0 0.00041 20.2 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|300710095|ref|YP_003735909.1| - 0.0037 16.8 0.5 0.02 14.4 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding UPF0122 PF04297.14 gi|300710095|ref|YP_003735909.1| - 0.066 13.5 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Phage_CI_repr PF07022.13 gi|300710095|ref|YP_003735909.1| - 0.13 12.3 0.1 0.32 11.1 0.1 1.6 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Acetyltransf_10 PF13673.7 gi|300710096|ref|YP_003735910.1| - 7.1e-11 42.1 0.0 1.1e-10 41.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300710096|ref|YP_003735910.1| - 1.2e-10 41.7 0.3 3.1e-10 40.3 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300710096|ref|YP_003735910.1| - 2.3e-08 34.3 0.3 8e-08 32.6 0.1 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300710096|ref|YP_003735910.1| - 0.0012 18.8 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|300710096|ref|YP_003735910.1| - 0.0013 18.8 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|300710096|ref|YP_003735910.1| - 0.0029 17.7 0.8 0.0056 16.8 0.8 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Zn-ribbon_8 PF09723.10 gi|300710096|ref|YP_003735910.1| - 0.0081 16.3 1.3 0.015 15.4 1.3 1.4 1 0 0 1 1 1 1 Zinc ribbon domain Mu-like_Com PF10122.9 gi|300710096|ref|YP_003735910.1| - 0.048 13.1 0.1 0.095 12.2 0.1 1.4 1 0 0 1 1 1 0 Mu-like prophage protein Com Acetyltransf_CG PF14542.6 gi|300710096|ref|YP_003735910.1| - 0.058 13.5 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DNA_RNApol_7kD PF03604.13 gi|300710096|ref|YP_003735910.1| - 0.063 13.0 2.5 0.1 12.3 2.5 1.3 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 gi|300710096|ref|YP_003735910.1| - 0.083 12.9 0.3 0.13 12.3 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon PanZ PF12568.8 gi|300710096|ref|YP_003735910.1| - 0.095 12.4 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Cadherin_pro PF08758.11 gi|300710096|ref|YP_003735910.1| - 0.1 12.8 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Cadherin prodomain like IBR PF01485.21 gi|300710096|ref|YP_003735910.1| - 0.18 12.0 0.4 0.32 11.3 0.4 1.3 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain TF_Zn_Ribbon PF08271.12 gi|300710096|ref|YP_003735910.1| - 0.28 10.7 4.4 0.34 10.5 1.1 2.4 1 1 1 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|300710096|ref|YP_003735910.1| - 0.46 10.5 1.7 0.89 9.6 0.6 1.9 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Lactamase_B PF00753.27 gi|300710097|ref|YP_003735911.1| - 1.4e-12 48.0 9.9 1.8e-10 41.2 9.7 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300710097|ref|YP_003735911.1| - 0.00027 20.5 4.8 0.0017 17.9 4.8 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF99 PF01949.16 gi|300710099|ref|YP_003735913.1| - 1.4e-53 181.0 0.0 1.6e-53 180.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 UDG PF03167.19 gi|300710100|ref|YP_003735914.1| - 5.2e-38 130.5 0.0 6.3e-38 130.2 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily GATase PF00117.28 gi|300710101|ref|YP_003735915.1| - 2.5e-24 86.1 0.0 3e-24 85.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|300710101|ref|YP_003735915.1| - 2.2e-08 33.9 0.0 4e-08 33.1 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|300710101|ref|YP_003735915.1| - 1.9e-06 27.9 0.0 7.4e-06 25.9 0.0 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|300710101|ref|YP_003735915.1| - 2.2e-05 24.3 0.1 0.0092 15.7 0.0 2.2 2 0 0 2 2 2 2 Peptidase C26 DJ-1_PfpI PF01965.24 gi|300710101|ref|YP_003735915.1| - 0.0014 18.5 0.0 0.0022 17.8 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase1_like PF07090.11 gi|300710101|ref|YP_003735915.1| - 0.052 13.0 0.0 0.073 12.5 0.0 1.2 1 0 0 1 1 1 0 Putative glutamine amidotransferase MOSC_N PF03476.16 gi|300710103|ref|YP_003735917.1| - 9.9e-15 54.5 0.0 3.1e-14 52.9 0.0 1.9 1 1 0 1 1 1 1 MOSC N-terminal beta barrel domain MOSC PF03473.17 gi|300710103|ref|YP_003735917.1| - 4.3e-10 39.7 0.1 7.9e-10 38.9 0.1 1.4 1 0 0 1 1 1 1 MOSC domain HTH_Tnp_ISL3 PF13542.6 gi|300710103|ref|YP_003735917.1| - 0.065 12.7 0.1 0.15 11.5 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 SWIM PF04434.17 gi|300710104|ref|YP_003735918.1| - 0.0039 16.8 1.9 1.6 8.5 0.3 2.1 2 0 0 2 2 2 2 SWIM zinc finger TRM PF02005.16 gi|300710105|ref|YP_003735919.1| - 3.5e-86 289.7 0.0 4.1e-86 289.5 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.6 gi|300710105|ref|YP_003735919.1| - 0.064 14.0 0.0 0.14 12.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|300710105|ref|YP_003735919.1| - 0.086 12.4 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Virul_fac_BrkB PF03631.15 gi|300710106|ref|YP_003735920.1| - 3.5e-44 151.3 25.2 3.5e-44 151.3 25.2 2.1 2 0 0 2 2 2 1 Virulence factor BrkB Presenilin PF01080.17 gi|300710106|ref|YP_003735920.1| - 0.095 11.5 2.0 0.34 9.6 0.0 2.1 2 0 0 2 2 2 0 Presenilin COG2 PF06148.11 gi|300710106|ref|YP_003735920.1| - 0.19 11.9 0.0 0.36 10.9 0.0 1.4 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF2207 PF09972.9 gi|300710106|ref|YP_003735920.1| - 0.54 9.0 0.0 0.54 9.0 0.0 3.3 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) Gln-synt_C PF00120.24 gi|300710107|ref|YP_003735921.1| - 4.2e-134 446.9 0.0 5.1e-134 446.6 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|300710107|ref|YP_003735921.1| - 9e-31 105.4 0.1 2.8e-30 103.9 0.0 1.9 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|300710107|ref|YP_003735921.1| - 0.00018 21.3 0.0 0.0015 18.3 0.0 2.2 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain AsnC_trans_reg PF01037.21 gi|300710108|ref|YP_003735922.1| - 6.4e-12 45.3 0.1 1e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|300710108|ref|YP_003735922.1| - 2.7e-10 39.6 0.1 4.8e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300710108|ref|YP_003735922.1| - 1.5e-07 31.2 0.1 2.4e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_AsnC-type PF13404.6 gi|300710108|ref|YP_003735922.1| - 3e-07 30.2 0.3 5.4e-07 29.3 0.3 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|300710108|ref|YP_003735922.1| - 6.2e-07 29.3 0.1 1.5e-06 28.1 0.0 1.6 2 0 0 2 2 1 1 HTH domain HTH_20 PF12840.7 gi|300710108|ref|YP_003735922.1| - 2.7e-05 24.1 0.1 5.1e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|300710108|ref|YP_003735922.1| - 2.8e-05 23.8 0.0 4.7e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|300710108|ref|YP_003735922.1| - 0.00015 21.8 0.0 0.00057 20.0 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_10 PF04967.12 gi|300710108|ref|YP_003735922.1| - 0.00079 19.2 0.1 0.0021 17.8 0.1 1.7 2 0 0 2 2 1 1 HTH DNA binding domain GntR PF00392.21 gi|300710108|ref|YP_003735922.1| - 0.00085 18.9 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|300710108|ref|YP_003735922.1| - 0.00089 19.1 0.1 0.0021 17.9 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300710108|ref|YP_003735922.1| - 0.0012 18.7 0.0 0.0068 16.3 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|300710108|ref|YP_003735922.1| - 0.0031 17.5 0.0 0.0055 16.6 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|300710108|ref|YP_003735922.1| - 0.0032 17.2 0.0 0.0085 15.8 0.0 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|300710108|ref|YP_003735922.1| - 0.0051 16.6 0.0 0.0096 15.7 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 gi|300710108|ref|YP_003735922.1| - 0.0075 16.7 0.0 0.013 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|300710108|ref|YP_003735922.1| - 0.0096 15.9 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix Mga PF05043.13 gi|300710108|ref|YP_003735922.1| - 0.013 16.1 0.0 0.044 14.4 0.0 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain HTH_IclR PF09339.10 gi|300710108|ref|YP_003735922.1| - 0.017 14.9 0.1 0.025 14.4 0.1 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Mga PF08280.11 gi|300710108|ref|YP_003735922.1| - 0.021 14.8 0.1 0.037 14.1 0.1 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain MarR_2 PF12802.7 gi|300710108|ref|YP_003735922.1| - 0.024 14.5 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF1670 PF07900.11 gi|300710108|ref|YP_003735922.1| - 0.034 13.5 0.0 0.073 12.4 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1670) HTH_34 PF13601.6 gi|300710108|ref|YP_003735922.1| - 0.034 14.3 0.1 0.06 13.5 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|300710108|ref|YP_003735922.1| - 0.04 14.1 0.0 0.078 13.2 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|300710108|ref|YP_003735922.1| - 0.049 14.1 0.1 0.36 11.3 0.0 2.3 2 1 1 3 3 3 0 Winged helix DNA-binding domain HTH_50 PF18024.1 gi|300710108|ref|YP_003735922.1| - 0.06 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain E3_UFM1_ligase PF09743.9 gi|300710108|ref|YP_003735922.1| - 0.083 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 HTH_7 PF02796.15 gi|300710108|ref|YP_003735922.1| - 0.11 12.6 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_36 PF13730.6 gi|300710108|ref|YP_003735922.1| - 0.11 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_41 PF14502.6 gi|300710108|ref|YP_003735922.1| - 0.11 12.2 0.1 0.33 10.7 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain GYD PF08734.11 gi|300710108|ref|YP_003735922.1| - 0.12 12.4 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 GYD domain GerE PF00196.19 gi|300710108|ref|YP_003735922.1| - 0.13 11.8 0.0 0.65 9.6 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Rrf2 PF02082.20 gi|300710108|ref|YP_003735922.1| - 0.15 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|300710108|ref|YP_003735922.1| - 0.16 12.1 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Cpn60_TCP1 PF00118.24 gi|300710111|ref|YP_003735925.1| - 4.7e-174 579.6 18.6 5.4e-174 579.4 18.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Glyco_tran_WecB PF03808.13 gi|300710111|ref|YP_003735925.1| - 0.021 14.8 0.4 0.51 10.3 0.0 2.7 3 0 0 3 3 3 0 Glycosyl transferase WecB/TagA/CpsF family KH_1 PF00013.29 gi|300710112|ref|YP_003735926.1| - 6.2e-14 51.6 2.5 3e-08 33.4 0.1 2.3 2 0 0 2 2 2 2 KH domain KH_8 PF17903.1 gi|300710112|ref|YP_003735926.1| - 0.00052 20.0 0.0 0.00084 19.4 0.0 1.3 1 0 0 1 1 1 1 Krr1 KH1 domain KH_2 PF07650.17 gi|300710112|ref|YP_003735926.1| - 0.00085 19.1 4.8 0.013 15.3 0.0 2.9 2 1 1 3 3 3 1 KH domain KH_5 PF13184.6 gi|300710112|ref|YP_003735926.1| - 0.019 15.0 1.0 5 7.3 0.1 2.4 2 0 0 2 2 2 0 NusA-like KH domain KH_4 PF13083.6 gi|300710112|ref|YP_003735926.1| - 0.025 14.5 3.2 2.3 8.1 0.1 2.9 2 1 0 2 2 2 0 KH domain FHA_2 PF17913.1 gi|300710112|ref|YP_003735926.1| - 0.082 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 FHA domain HpcH_HpaI PF03328.14 gi|300710113|ref|YP_003735927.1| - 1.5e-32 112.5 0.0 1.9e-32 112.2 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family Abhydrolase_6 PF12697.7 gi|300710114|ref|YP_003735928.1| - 3.2e-23 83.5 11.9 3.7e-23 83.3 11.9 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300710114|ref|YP_003735928.1| - 3.7e-19 69.4 0.0 2.5e-15 56.8 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|300710114|ref|YP_003735928.1| - 4.6e-09 35.9 0.0 1.3e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 gi|300710114|ref|YP_003735928.1| - 0.0041 17.3 0.0 0.0057 16.8 0.0 1.1 1 0 0 1 1 1 1 Thioesterase domain TFA2_Winged_2 PF18121.1 gi|300710114|ref|YP_003735928.1| - 0.061 13.0 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 TFA2 Winged helix domain 2 RIO1 PF01163.22 gi|300710115|ref|YP_003735929.1| - 1.2e-61 207.6 1.1 3.4e-61 206.2 0.1 1.8 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 gi|300710115|ref|YP_003735929.1| - 1.5e-06 28.4 2.7 0.0011 18.9 0.1 2.8 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|300710115|ref|YP_003735929.1| - 8e-05 22.1 0.1 0.00047 19.6 0.1 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-PolyVal PF18762.1 gi|300710115|ref|YP_003735929.1| - 0.12 12.3 0.4 4.6 7.2 0.1 2.5 3 0 0 3 3 3 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins DUF4418 PF14387.6 gi|300710116|ref|YP_003735930.1| - 0.19 12.0 4.2 0.21 11.8 4.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4418) DUF726 PF05277.12 gi|300710116|ref|YP_003735930.1| - 0.31 9.9 7.6 0.35 9.8 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) MS_channel PF00924.18 gi|300710116|ref|YP_003735930.1| - 0.54 9.8 11.9 0.64 9.5 11.9 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel PetM PF08041.11 gi|300710116|ref|YP_003735930.1| - 0.61 9.7 14.5 0.67 9.6 3.6 2.5 2 0 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 PMP1_2 PF08114.11 gi|300710116|ref|YP_003735930.1| - 5.9 6.7 12.8 2.1 8.2 3.9 2.4 1 1 1 2 2 2 0 ATPase proteolipid family DUF460 PF04312.13 gi|300710118|ref|YP_003735932.1| - 1.3e-47 161.1 0.2 1.3e-47 161.1 0.2 2.6 3 0 0 3 3 3 1 Protein of unknown function (DUF460) acVLRF1 PF18859.1 gi|300710118|ref|YP_003735932.1| - 0.0015 18.8 1.1 0.0015 18.8 1.1 3.0 4 0 0 4 4 2 1 Actinobacteria/chloroflexi VLRF1 release factor FAM76 PF16046.5 gi|300710118|ref|YP_003735932.1| - 0.0021 17.5 1.6 0.0033 16.8 1.6 1.3 1 0 0 1 1 1 1 FAM76 protein HMMR_N PF15905.5 gi|300710118|ref|YP_003735932.1| - 0.0061 16.1 8.6 0.0095 15.4 8.6 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal DUF4407 PF14362.6 gi|300710118|ref|YP_003735932.1| - 0.018 14.4 7.8 0.034 13.5 7.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) bZIP_1 PF00170.21 gi|300710118|ref|YP_003735932.1| - 0.023 14.8 16.6 0.61 10.2 0.1 2.6 2 0 0 2 2 2 0 bZIP transcription factor XhlA PF10779.9 gi|300710118|ref|YP_003735932.1| - 0.026 14.7 12.4 0.39 11.0 1.6 2.7 2 0 0 2 2 2 0 Haemolysin XhlA FlaF PF07309.11 gi|300710118|ref|YP_003735932.1| - 0.033 14.2 2.5 0.08 13.0 2.5 1.6 1 0 0 1 1 1 0 Flagellar protein FlaF DUF5082 PF16888.5 gi|300710118|ref|YP_003735932.1| - 0.06 13.6 5.9 3.2 8.0 0.3 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) ATG16 PF08614.11 gi|300710118|ref|YP_003735932.1| - 0.11 12.7 12.4 0.29 11.3 12.4 1.7 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Atg14 PF10186.9 gi|300710118|ref|YP_003735932.1| - 0.12 11.4 9.4 0.022 13.8 5.8 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 gi|300710118|ref|YP_003735932.1| - 0.13 11.5 9.6 1.8 7.8 5.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Herpes_UL6 PF01763.16 gi|300710118|ref|YP_003735932.1| - 0.14 10.7 1.5 0.2 10.1 1.5 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like TMF_TATA_bd PF12325.8 gi|300710118|ref|YP_003735932.1| - 0.17 12.1 14.8 1.3 9.2 2.3 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding ZapB PF06005.12 gi|300710118|ref|YP_003735932.1| - 0.25 11.8 12.2 3.2 8.3 4.0 2.7 1 1 1 2 2 2 0 Cell division protein ZapB DUF2968 PF11180.8 gi|300710118|ref|YP_003735932.1| - 0.29 10.8 8.7 0.59 9.7 8.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Tho2 PF11262.8 gi|300710118|ref|YP_003735932.1| - 0.29 10.3 5.7 0.53 9.4 5.7 1.4 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 SlyX PF04102.12 gi|300710118|ref|YP_003735932.1| - 0.34 11.6 7.1 0.7 10.6 0.6 3.2 1 1 1 2 2 2 0 SlyX DivIC PF04977.15 gi|300710118|ref|YP_003735932.1| - 0.43 10.4 9.0 7.9 6.3 4.5 3.0 1 1 0 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 gi|300710118|ref|YP_003735932.1| - 1.1 9.7 4.0 6.8 7.2 0.2 2.8 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Med21 PF11221.8 gi|300710118|ref|YP_003735932.1| - 2.2 8.6 15.5 1.8 8.8 4.9 2.8 1 1 1 2 2 2 0 Subunit 21 of Mediator complex DUF16 PF01519.16 gi|300710118|ref|YP_003735932.1| - 3.3 8.3 7.8 5.1 7.6 2.4 2.6 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF641 PF04859.12 gi|300710118|ref|YP_003735932.1| - 6.1 7.2 9.2 0.9 9.9 1.4 2.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4164 PF13747.6 gi|300710118|ref|YP_003735932.1| - 6.8 7.1 20.7 3.5 8.0 16.1 2.9 3 1 0 3 3 1 0 Domain of unknown function (DUF4164) Spc7 PF08317.11 gi|300710118|ref|YP_003735932.1| - 7 5.4 13.2 0.7 8.7 6.4 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Spc24 PF08286.11 gi|300710118|ref|YP_003735932.1| - 7.5 6.8 9.2 22 5.3 4.7 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Lactamase_B_2 PF12706.7 gi|300710119|ref|YP_003735933.1| - 1.8e-25 89.6 1.7 2.1e-23 82.9 1.7 2.2 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300710119|ref|YP_003735933.1| - 9.1e-14 51.9 5.4 1.9e-11 44.4 5.4 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|300710119|ref|YP_003735933.1| - 0.0012 18.5 0.0 0.0022 17.6 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease GCHY-1 PF02649.14 gi|300710120|ref|YP_003735934.1| - 1.4e-74 250.9 0.1 1.6e-74 250.7 0.1 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 SfsA PF03749.13 gi|300710120|ref|YP_003735934.1| - 0.037 13.9 0.0 0.089 12.7 0.0 1.6 1 0 0 1 1 1 0 Sugar fermentation stimulation protein RE domain NAD_kinase PF01513.21 gi|300710121|ref|YP_003735935.1| - 5.2e-38 130.9 0.9 1.8e-37 129.1 0.9 1.7 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|300710121|ref|YP_003735935.1| - 0.0054 16.4 0.1 0.0097 15.5 0.1 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Fe-ADH PF00465.19 gi|300710121|ref|YP_003735935.1| - 0.065 12.0 0.3 0.09 11.6 0.3 1.1 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase TrkA_N PF02254.18 gi|300710123|ref|YP_003735937.1| - 2e-28 99.0 3.8 3.5e-17 62.7 0.2 2.4 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|300710123|ref|YP_003735937.1| - 4.6e-07 29.6 0.0 1.9e-06 27.6 0.0 2.2 1 0 0 1 1 1 1 TrkA-C domain Ion_trans_2 PF07885.16 gi|300710123|ref|YP_003735937.1| - 0.00043 20.2 4.4 0.0007 19.5 4.4 1.3 1 0 0 1 1 1 1 Ion channel SlyX PF04102.12 gi|300710124|ref|YP_003735938.1| - 0.13 12.9 1.3 0.28 11.8 1.3 1.5 1 0 0 1 1 1 0 SlyX Auto_anti-p27 PF06677.12 gi|300710126|ref|YP_003735940.1| - 0.0071 16.5 3.8 0.009 16.1 3.8 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ACC PF17848.1 gi|300710126|ref|YP_003735940.1| - 0.032 14.3 3.1 0.52 10.4 3.1 2.2 1 1 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain zf-Mss51 PF13824.6 gi|300710126|ref|YP_003735940.1| - 0.049 13.7 8.0 0.25 11.5 2.4 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Prok-RING_1 PF14446.6 gi|300710126|ref|YP_003735940.1| - 0.54 10.2 9.9 1.1 9.3 9.9 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 PALP PF00291.25 gi|300710127|ref|YP_003735941.1| - 5.8e-78 262.3 7.8 7.6e-78 261.9 7.8 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NTP_transf_3 PF12804.7 gi|300710127|ref|YP_003735941.1| - 0.0022 18.4 4.0 0.036 14.4 0.6 3.1 3 1 0 3 3 3 1 MobA-like NTP transferase domain ACT_4 PF13291.6 gi|300710127|ref|YP_003735941.1| - 0.0044 17.6 0.0 0.053 14.1 0.0 2.3 2 0 0 2 2 2 1 ACT domain DUF4147 PF13660.6 gi|300710127|ref|YP_003735941.1| - 0.049 13.2 2.2 0.18 11.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4147) ATPgrasp_N PF18130.1 gi|300710127|ref|YP_003735941.1| - 0.05 14.2 1.6 2.5 8.7 0.1 3.0 3 0 0 3 3 3 0 ATP-grasp N-terminal domain Aminotran_3 PF00202.21 gi|300710128|ref|YP_003735942.1| - 4.4e-100 335.2 0.0 5.5e-100 334.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Jag_N PF14804.6 gi|300710128|ref|YP_003735942.1| - 0.12 12.8 1.0 0.46 10.9 0.2 2.3 2 0 0 2 2 2 0 Jag N-terminus BCCT PF02028.17 gi|300710129|ref|YP_003735943.1| - 3.8e-153 510.4 53.4 4.3e-153 510.2 53.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF5510 PF17629.2 gi|300710129|ref|YP_003735943.1| - 0.081 12.9 0.1 0.081 12.9 0.1 2.9 3 1 1 4 4 4 0 Family of unknown function (DUF5510) Peptidase_M20 PF01546.28 gi|300710131|ref|YP_003735945.1| - 7.3e-22 78.1 4.8 1.5e-21 77.1 4.8 1.6 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|300710131|ref|YP_003735945.1| - 1.2e-12 47.7 0.7 2.3e-12 46.8 0.7 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain 2-Hacid_dh_C PF02826.19 gi|300710132|ref|YP_003735946.1| - 2.3e-51 173.7 0.0 3.1e-51 173.3 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300710132|ref|YP_003735946.1| - 5.2e-12 45.6 0.0 6.6e-12 45.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.17 gi|300710132|ref|YP_003735946.1| - 0.0036 17.8 0.0 0.0071 16.9 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|300710132|ref|YP_003735946.1| - 0.076 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain DAO PF01266.24 gi|300710133|ref|YP_003735947.1| - 6.8e-29 101.5 0.0 9e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Mqo PF06039.15 gi|300710133|ref|YP_003735947.1| - 2.8e-25 88.8 0.0 1.3e-24 86.6 0.0 1.8 1 1 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Pyr_redox_2 PF07992.14 gi|300710133|ref|YP_003735947.1| - 1.7e-06 27.5 0.1 0.0041 16.4 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300710133|ref|YP_003735947.1| - 2.5e-05 23.7 0.2 0.0018 17.6 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300710133|ref|YP_003735947.1| - 9.7e-05 21.6 0.0 0.00013 21.2 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|300710133|ref|YP_003735947.1| - 0.00048 18.9 0.2 0.012 14.4 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 gi|300710133|ref|YP_003735947.1| - 0.0026 18.3 0.2 0.66 10.6 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300710133|ref|YP_003735947.1| - 0.0049 16.9 0.2 1.2 9.1 0.1 2.3 2 0 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|300710133|ref|YP_003735947.1| - 0.005 17.0 0.0 0.016 15.4 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Peptidase_M24 PF00557.24 gi|300710134|ref|YP_003735948.1| - 4.5e-34 118.0 0.0 7.7e-34 117.2 0.0 1.4 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|300710134|ref|YP_003735948.1| - 6.8e-20 72.1 0.0 1.3e-19 71.2 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain CodY PF06018.14 gi|300710134|ref|YP_003735948.1| - 0.025 14.1 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 CodY GAF-like domain Aminotran_3 PF00202.21 gi|300710135|ref|YP_003735949.1| - 3e-81 273.2 0.0 1.1e-80 271.3 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class-III Phage_holin_3_5 PF16085.5 gi|300710135|ref|YP_003735949.1| - 0.16 12.1 0.0 0.49 10.6 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III Ribonuc_red_lgC PF02867.15 gi|300710136|ref|YP_003735950.1| - 4.8e-150 500.6 0.0 6.3e-150 500.2 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|300710136|ref|YP_003735950.1| - 6e-25 87.1 0.0 1.6e-24 85.7 0.0 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain DUF2461 PF09365.10 gi|300710136|ref|YP_003735950.1| - 0.037 14.0 1.4 3.9 7.4 0.0 3.6 3 1 1 4 4 4 0 Conserved hypothetical protein (DUF2461) TraG-D_C PF12696.7 gi|300710136|ref|YP_003735950.1| - 0.096 12.7 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG DUF736 PF05284.12 gi|300710136|ref|YP_003735950.1| - 0.12 12.3 0.0 0.94 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF736) Fzo_mitofusin PF04799.13 gi|300710137|ref|YP_003735951.1| - 0.28 10.7 3.0 0.34 10.4 3.0 1.1 1 0 0 1 1 1 0 fzo-like conserved region Wzy_C PF04932.15 gi|300710137|ref|YP_003735951.1| - 0.38 10.4 8.6 0.41 10.3 8.6 1.0 1 0 0 1 1 1 0 O-Antigen ligase Iron_permease PF04120.12 gi|300710137|ref|YP_003735951.1| - 0.43 10.4 3.0 0.51 10.1 3.0 1.1 1 0 0 1 1 1 0 Low affinity iron permease GATase PF00117.28 gi|300710138|ref|YP_003735952.1| - 4.2e-48 163.6 0.0 4.7e-48 163.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|300710138|ref|YP_003735952.1| - 5.4e-07 29.6 0.1 2.7e-06 27.3 0.1 1.9 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|300710139|ref|YP_003735953.1| - 2.3e-90 302.6 0.0 8.2e-90 300.8 0.0 1.8 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|300710139|ref|YP_003735953.1| - 6.3e-19 68.6 0.0 2.9e-16 59.9 0.0 3.6 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region PRAI PF00697.22 gi|300710140|ref|YP_003735954.1| - 3e-36 125.0 0.0 3.5e-36 124.8 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BtpA PF03437.15 gi|300710140|ref|YP_003735954.1| - 0.047 13.1 0.1 0.094 12.1 0.1 1.5 1 1 0 1 1 1 0 BtpA family TMP-TENI PF02581.17 gi|300710140|ref|YP_003735954.1| - 0.11 11.8 0.9 0.47 9.8 0.0 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase Glycos_transf_3 PF00591.21 gi|300710141|ref|YP_003735955.1| - 7.3e-98 327.2 1.9 1e-97 326.7 1.9 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|300710141|ref|YP_003735955.1| - 3.2e-17 62.1 5.2 3.2e-17 62.1 5.2 2.0 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain DUF2717 PF10911.8 gi|300710141|ref|YP_003735955.1| - 0.025 14.3 0.1 0.12 12.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2717) Lar_N PF09861.9 gi|300710142|ref|YP_003735956.1| - 0.0008 18.6 0.1 0.0016 17.6 0.0 1.5 2 0 0 2 2 2 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|300710142|ref|YP_003735956.1| - 0.0015 18.8 0.0 0.0028 17.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF362) DZR PF12773.7 gi|300710143|ref|YP_003735957.1| - 0.011 15.8 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|300710143|ref|YP_003735957.1| - 0.015 14.6 3.8 0.049 13.1 3.8 1.8 1 1 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|300710143|ref|YP_003735957.1| - 0.097 12.4 3.7 2.2 8.0 0.2 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit RecO_N_2 PF13114.6 gi|300710143|ref|YP_003735957.1| - 0.17 11.6 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 RecO N terminal Zn-ribbon_8 PF09723.10 gi|300710143|ref|YP_003735957.1| - 0.69 10.1 3.2 1.3 9.1 0.2 2.3 1 1 1 2 2 2 0 Zinc ribbon domain CBS PF00571.28 gi|300710145|ref|YP_003735959.1| - 9.3e-37 125.3 9.7 1.2e-12 48.1 0.9 4.3 4 0 0 4 4 4 4 CBS domain Ribosomal_S30AE PF02482.19 gi|300710145|ref|YP_003735959.1| - 0.0032 18.2 0.3 0.016 15.9 0.0 2.4 2 1 0 2 2 2 1 Sigma 54 modulation protein / S30EA ribosomal protein GAF PF01590.26 gi|300710145|ref|YP_003735959.1| - 0.054 14.1 0.4 10 6.7 0.0 2.7 2 1 1 3 3 3 0 GAF domain AzlD PF05437.12 gi|300710146|ref|YP_003735960.1| - 3e-15 56.2 9.1 3.5e-15 56.0 9.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) AzlC PF03591.14 gi|300710147|ref|YP_003735961.1| - 2.7e-36 125.0 13.8 2.7e-36 125.0 13.8 2.1 2 0 0 2 2 2 1 AzlC protein FXR_C1 PF16096.5 gi|300710147|ref|YP_003735961.1| - 0.16 12.2 1.2 0.27 11.5 1.2 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DUF359 PF04019.12 gi|300710148|ref|YP_003735962.1| - 3.7e-37 126.8 0.0 4.6e-37 126.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Spt4 PF06093.13 gi|300710149|ref|YP_003735963.1| - 1.6e-14 53.8 0.2 1.8e-14 53.6 0.2 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger DZR PF12773.7 gi|300710149|ref|YP_003735963.1| - 0.00016 21.6 2.3 0.0002 21.3 2.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|300710149|ref|YP_003735963.1| - 0.00083 20.1 1.7 0.0011 19.7 1.7 1.2 1 0 0 1 1 1 1 zinc-ribbon family zinc_ribbon_2 PF13240.6 gi|300710149|ref|YP_003735963.1| - 0.0018 17.9 1.4 0.0024 17.5 1.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zf-ACC PF17848.1 gi|300710149|ref|YP_003735963.1| - 0.002 18.1 0.5 0.74 9.9 0.0 2.3 2 0 0 2 2 2 1 Acetyl-coA carboxylase zinc finger domain DUF35_N PF12172.8 gi|300710149|ref|YP_003735963.1| - 0.0088 15.9 4.8 0.013 15.4 4.8 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) HypA PF01155.19 gi|300710149|ref|YP_003735963.1| - 0.0091 16.0 0.4 0.013 15.5 0.4 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_4 PF14570.6 gi|300710149|ref|YP_003735963.1| - 0.02 14.7 1.6 0.028 14.2 1.6 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain TF_Zn_Ribbon PF08271.12 gi|300710149|ref|YP_003735963.1| - 0.024 14.1 4.2 0.1 12.1 0.2 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|300710149|ref|YP_003735963.1| - 0.045 13.4 4.2 0.15 11.8 0.3 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TackOD1 PF18551.1 gi|300710149|ref|YP_003735963.1| - 0.045 13.4 0.2 0.045 13.4 0.2 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zf-ribbon_3 PF13248.6 gi|300710149|ref|YP_003735963.1| - 0.057 12.9 5.1 0.17 11.3 5.1 1.8 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|300710149|ref|YP_003735963.1| - 0.13 12.4 4.7 0.61 10.3 4.7 2.0 1 1 0 1 1 1 0 Zinc ribbon domain NRDD PF13597.6 gi|300710149|ref|YP_003735963.1| - 0.13 11.1 0.5 0.13 11.0 0.5 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zinc_ribbon_9 PF14369.6 gi|300710149|ref|YP_003735963.1| - 0.44 10.8 5.5 0.41 11.0 3.8 1.8 2 1 0 2 2 2 0 zinc-ribbon DYW_deaminase PF14432.6 gi|300710149|ref|YP_003735963.1| - 0.5 10.2 2.2 2.6 7.9 1.9 1.9 2 0 0 2 2 2 0 DYW family of nucleic acid deaminases Nudix_N_2 PF14803.6 gi|300710149|ref|YP_003735963.1| - 0.61 10.0 7.8 3.8 7.5 2.7 2.4 2 0 0 2 2 2 0 Nudix N-terminal S1 PF00575.23 gi|300710150|ref|YP_003735964.1| - 1e-12 48.2 0.2 1e-12 48.2 0.2 1.7 2 0 0 2 2 2 1 S1 RNA binding domain SHS2_Rpb7-N PF03876.17 gi|300710150|ref|YP_003735964.1| - 2e-11 44.1 0.1 3.3e-11 43.4 0.1 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 RNA_pol_Rbc25 PF08292.12 gi|300710150|ref|YP_003735964.1| - 0.11 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 DIMCO_N PF16844.5 gi|300710150|ref|YP_003735964.1| - 0.11 12.8 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal PIN_9 PF18477.1 gi|300710151|ref|YP_003735965.1| - 1.4e-40 138.2 0.1 1.6e-40 138.0 0.1 1.0 1 0 0 1 1 1 1 PIN like domain DUF188 PF02639.14 gi|300710151|ref|YP_003735965.1| - 3.3e-05 23.5 0.1 4.8e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 Peripla_BP_2 PF01497.18 gi|300710151|ref|YP_003735965.1| - 0.026 14.1 0.0 0.029 13.9 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein PIN_4 PF13638.6 gi|300710151|ref|YP_003735965.1| - 0.14 12.5 0.0 0.43 10.9 0.0 1.7 1 1 0 1 1 1 0 PIN domain PIN_3 PF13470.6 gi|300710151|ref|YP_003735965.1| - 0.28 12.0 1.9 0.63 10.8 0.5 2.1 1 1 1 2 2 2 0 PIN domain GTP_EFTU PF00009.27 gi|300710152|ref|YP_003735966.1| - 4.6e-30 104.6 1.4 2.9e-29 102.0 1.4 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|300710152|ref|YP_003735966.1| - 1.8e-29 101.8 0.0 4.4e-29 100.6 0.0 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|300710152|ref|YP_003735966.1| - 1.7e-09 37.9 1.6 6.3e-09 36.1 1.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|300710152|ref|YP_003735966.1| - 6.6e-05 23.0 0.0 0.00016 21.7 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|300710152|ref|YP_003735966.1| - 0.00012 22.0 0.4 0.011 15.6 0.1 2.2 2 0 0 2 2 2 1 RsgA GTPase PduV-EutP PF10662.9 gi|300710152|ref|YP_003735966.1| - 0.0013 18.5 0.5 0.25 11.1 0.0 2.2 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|300710152|ref|YP_003735966.1| - 0.0023 17.5 0.3 1 8.8 0.1 2.4 2 1 0 2 2 2 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|300710152|ref|YP_003735966.1| - 0.007 16.4 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain CarboxypepD_reg PF13620.6 gi|300710153|ref|YP_003735967.1| - 7.6e-11 42.1 1.2 1.5e-10 41.2 1.2 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 gi|300710153|ref|YP_003735967.1| - 0.0013 18.7 0.7 0.0013 18.7 0.7 2.3 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) CarbopepD_reg_2 PF13715.6 gi|300710153|ref|YP_003735967.1| - 0.011 15.8 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 CarboxypepD_reg-like domain TAT_signal PF10518.9 gi|300710153|ref|YP_003735967.1| - 0.014 15.2 1.1 0.014 15.2 1.1 2.3 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence SpaA PF17802.1 gi|300710153|ref|YP_003735967.1| - 0.046 14.0 0.2 0.046 14.0 0.2 1.9 2 1 0 2 2 2 0 Prealbumin-like fold domain UCR_Fe-S_N PF10399.9 gi|300710153|ref|YP_003735967.1| - 0.081 12.3 1.2 0.21 10.9 0.2 2.2 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MG4 PF17789.1 gi|300710153|ref|YP_003735967.1| - 0.18 12.0 0.0 0.77 9.9 0.0 1.9 2 0 0 2 2 2 0 Macroglobulin domain MG4 DUF2796 PF10986.8 gi|300710154|ref|YP_003735968.1| - 0.091 12.7 9.6 0.12 12.3 9.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) DsbD PF02683.15 gi|300710155|ref|YP_003735969.1| - 1.1e-10 41.8 14.6 1e-09 38.6 12.6 2.0 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region Redoxin PF08534.10 gi|300710156|ref|YP_003735970.1| - 9.7e-14 51.3 0.0 1.2e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 gi|300710156|ref|YP_003735970.1| - 1.2e-11 44.5 0.0 1.6e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin PF00085.20 gi|300710156|ref|YP_003735970.1| - 6.2e-07 29.4 0.0 0.00014 21.8 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_8 PF13905.6 gi|300710156|ref|YP_003735970.1| - 1.2e-06 28.8 0.0 2.4e-06 27.8 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|300710156|ref|YP_003735970.1| - 0.00084 19.8 0.0 0.0012 19.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain UCR_Fe-S_N PF10399.9 gi|300710156|ref|YP_003735970.1| - 0.93 8.9 5.2 1.9 7.9 5.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SCO1-SenC PF02630.14 gi|300710157|ref|YP_003735971.1| - 2.8e-17 62.9 0.4 5.4e-17 62.0 0.4 1.4 1 1 0 1 1 1 1 SCO1/SenC Redoxin PF08534.10 gi|300710157|ref|YP_003735971.1| - 0.0006 19.6 0.0 0.002 17.9 0.0 1.8 2 0 0 2 2 2 1 Redoxin AhpC-TSA PF00578.21 gi|300710157|ref|YP_003735971.1| - 0.0039 17.1 0.0 0.016 15.1 0.0 2.0 1 1 0 1 1 1 1 AhpC/TSA family ArsA_HSP20 PF17886.1 gi|300710157|ref|YP_003735971.1| - 0.13 11.9 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 HSP20-like domain found in ArsA Thioredoxin_4 PF13462.6 gi|300710158|ref|YP_003735972.1| - 3.8e-30 105.2 0.0 4.4e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|300710158|ref|YP_003735972.1| - 4.4e-10 39.7 0.2 6e-08 32.7 0.2 2.0 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_2 PF13098.6 gi|300710158|ref|YP_003735972.1| - 0.0032 17.9 0.3 0.024 15.1 0.3 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|300710158|ref|YP_003735972.1| - 0.014 15.5 0.1 0.22 11.6 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin domain GntR PF00392.21 gi|300710158|ref|YP_003735972.1| - 0.079 12.6 0.6 0.24 11.1 0.1 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Peripla_BP_2 PF01497.18 gi|300710161|ref|YP_003735975.1| - 3.1e-19 69.5 0.0 4.2e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein ABC_tran PF00005.27 gi|300710162|ref|YP_003735976.1| - 8.4e-31 107.3 0.0 1.2e-30 106.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|300710162|ref|YP_003735976.1| - 1.2e-10 41.2 0.0 6.3e-05 22.5 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|300710162|ref|YP_003735976.1| - 1.4e-10 41.5 4.8 2.9e-05 24.0 0.6 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|300710162|ref|YP_003735976.1| - 1.1e-05 25.1 0.1 2.2e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|300710162|ref|YP_003735976.1| - 4.4e-05 23.8 1.1 0.0003 21.1 1.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300710162|ref|YP_003735976.1| - 5.2e-05 23.7 0.5 0.00011 22.7 0.5 1.6 1 1 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|300710162|ref|YP_003735976.1| - 0.0001 21.2 0.3 0.22 10.3 0.0 2.9 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_30 PF13604.6 gi|300710162|ref|YP_003735976.1| - 0.00013 21.7 0.1 0.00024 20.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|300710162|ref|YP_003735976.1| - 0.00046 20.4 0.2 0.0012 19.1 0.2 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|300710162|ref|YP_003735976.1| - 0.00064 19.2 0.1 0.094 12.1 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 gi|300710162|ref|YP_003735976.1| - 0.00087 19.8 0.0 0.0012 19.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|300710162|ref|YP_003735976.1| - 0.002 17.9 0.0 0.0035 17.1 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|300710162|ref|YP_003735976.1| - 0.0024 17.2 0.2 0.0059 15.9 0.0 1.7 2 0 0 2 2 1 1 Zeta toxin SRP54 PF00448.22 gi|300710162|ref|YP_003735976.1| - 0.0036 16.9 0.0 0.0064 16.1 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_25 PF13481.6 gi|300710162|ref|YP_003735976.1| - 0.0044 16.6 0.2 0.011 15.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|300710162|ref|YP_003735976.1| - 0.0057 16.6 0.3 0.0099 15.8 0.1 1.6 2 0 0 2 2 1 1 RsgA GTPase NACHT PF05729.12 gi|300710162|ref|YP_003735976.1| - 0.0069 16.3 0.2 0.019 14.9 0.0 1.8 2 0 0 2 2 2 1 NACHT domain AAA PF00004.29 gi|300710162|ref|YP_003735976.1| - 0.0076 16.7 0.2 0.022 15.2 0.0 1.9 2 1 1 3 3 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|300710162|ref|YP_003735976.1| - 0.0082 15.6 0.2 0.34 10.3 0.2 2.1 2 0 0 2 2 2 1 Bacterial TniB protein MMR_HSR1 PF01926.23 gi|300710162|ref|YP_003735976.1| - 0.0083 16.2 0.3 0.61 10.2 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase APS_kinase PF01583.20 gi|300710162|ref|YP_003735976.1| - 0.013 15.4 0.2 0.028 14.3 0.1 1.6 2 0 0 2 2 1 0 Adenylylsulphate kinase MukB PF04310.12 gi|300710162|ref|YP_003735976.1| - 0.014 15.2 1.1 0.034 14.0 0.1 1.9 2 0 0 2 2 2 0 MukB N-terminal ATP_bind_1 PF03029.17 gi|300710162|ref|YP_003735976.1| - 0.022 14.6 0.2 2.1 8.1 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 gi|300710162|ref|YP_003735976.1| - 0.04 14.3 0.0 0.087 13.2 0.0 1.7 1 1 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 gi|300710162|ref|YP_003735976.1| - 0.043 13.5 0.3 0.34 10.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|300710162|ref|YP_003735976.1| - 0.047 13.9 0.1 0.13 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|300710162|ref|YP_003735976.1| - 0.048 13.6 0.3 0.48 10.3 0.0 2.2 2 1 0 3 3 3 0 Rad17 P-loop domain AAA_14 PF13173.6 gi|300710162|ref|YP_003735976.1| - 0.052 13.6 0.0 0.14 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|300710162|ref|YP_003735976.1| - 0.053 13.1 0.1 0.11 12.0 0.1 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|300710162|ref|YP_003735976.1| - 0.061 13.9 0.1 0.18 12.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|300710162|ref|YP_003735976.1| - 0.066 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Cytidylate_kin PF02224.18 gi|300710162|ref|YP_003735976.1| - 0.067 12.9 0.1 0.15 11.8 0.1 1.7 1 0 0 1 1 1 0 Cytidylate kinase AAA_7 PF12775.7 gi|300710162|ref|YP_003735976.1| - 0.094 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 gi|300710162|ref|YP_003735976.1| - 0.17 11.8 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|300710162|ref|YP_003735976.1| - 0.2 10.8 0.6 1.2 8.2 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain CobA_CobO_BtuR PF02572.15 gi|300710162|ref|YP_003735976.1| - 0.73 10.1 3.4 0.54 10.5 1.3 1.7 2 1 0 2 2 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FecCD PF01032.18 gi|300710163|ref|YP_003735977.1| - 1.4e-87 293.6 36.8 2e-87 293.1 36.8 1.2 1 0 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.18 gi|300710164|ref|YP_003735978.1| - 3.4e-10 39.9 0.0 5e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein TAT_signal PF10518.9 gi|300710164|ref|YP_003735978.1| - 0.0042 16.9 0.0 0.0075 16.1 0.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Prog_receptor PF02161.15 gi|300710165|ref|YP_003735979.1| - 0.0029 16.4 0.1 0.0037 16.1 0.1 1.1 1 0 0 1 1 1 1 Progesterone receptor Peripla_BP_2 PF01497.18 gi|300710166|ref|YP_003735980.1| - 3.6e-22 79.1 0.0 4.3e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Protoglobin PF11563.8 gi|300710167|ref|YP_003735981.1| - 1.2e-36 126.0 0.0 1.4e-36 125.8 0.0 1.0 1 0 0 1 1 1 1 Protoglobin HxlR PF01638.17 gi|300710168|ref|YP_003735982.1| - 1.1e-20 73.2 0.0 1.3e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|300710168|ref|YP_003735982.1| - 3.1e-06 27.1 0.0 5.1e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|300710168|ref|YP_003735982.1| - 3e-05 23.8 0.0 4.5e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|300710168|ref|YP_003735982.1| - 6.3e-05 22.8 0.1 0.00011 22.0 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|300710168|ref|YP_003735982.1| - 0.0001 22.4 0.0 0.00011 22.3 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|300710168|ref|YP_003735982.1| - 0.0014 18.1 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|300710168|ref|YP_003735982.1| - 0.0017 18.2 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DprA_WH PF17782.1 gi|300710168|ref|YP_003735982.1| - 0.003 17.6 0.0 0.0054 16.8 0.0 1.4 1 0 0 1 1 1 1 DprA winged helix domain PadR PF03551.14 gi|300710168|ref|YP_003735982.1| - 0.0052 16.7 0.0 0.006 16.5 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_AsnC-type PF13404.6 gi|300710168|ref|YP_003735982.1| - 0.022 14.6 0.3 0.048 13.5 0.3 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|300710168|ref|YP_003735982.1| - 0.024 14.6 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 MarR family Replic_Relax PF13814.6 gi|300710168|ref|YP_003735982.1| - 0.026 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_IclR PF09339.10 gi|300710168|ref|YP_003735982.1| - 0.048 13.5 0.2 0.1 12.4 0.0 1.6 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|300710168|ref|YP_003735982.1| - 0.062 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF505 PF04458.12 gi|300710168|ref|YP_003735982.1| - 0.073 11.4 0.0 0.073 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) GntR PF00392.21 gi|300710168|ref|YP_003735982.1| - 0.081 12.6 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Nuc_rec_co-act PF08815.10 gi|300710168|ref|YP_003735982.1| - 0.093 12.6 0.1 1.3 8.9 0.0 2.1 2 0 0 2 2 2 0 Nuclear receptor coactivator HTH_psq PF05225.16 gi|300710168|ref|YP_003735982.1| - 0.11 12.3 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain HTH_27 PF13463.6 gi|300710168|ref|YP_003735982.1| - 0.13 12.8 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Lactamase_B_2 PF12706.7 gi|300710169|ref|YP_003735983.1| - 4e-22 78.7 0.8 5.1e-22 78.4 0.8 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300710169|ref|YP_003735983.1| - 3.3e-05 24.0 4.1 4.6e-05 23.5 4.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|300710169|ref|YP_003735983.1| - 0.0098 15.8 0.3 0.05 13.5 0.3 2.2 1 1 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.29 gi|300710170|ref|YP_003735984.1| - 7.7e-38 129.9 0.0 1.6e-37 128.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|300710170|ref|YP_003735984.1| - 4e-09 36.1 0.0 1.1e-08 34.7 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|300710170|ref|YP_003735984.1| - 3.4e-06 27.1 0.0 1.1e-05 25.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 gi|300710170|ref|YP_003735984.1| - 0.00011 22.5 0.2 0.002 18.4 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|300710170|ref|YP_003735984.1| - 0.00016 21.9 1.3 0.022 15.0 0.3 3.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|300710170|ref|YP_003735984.1| - 0.00025 21.2 0.0 0.00099 19.3 0.0 2.1 2 1 0 2 2 1 1 AAA domain AAA_18 PF13238.6 gi|300710170|ref|YP_003735984.1| - 0.00032 21.2 0.0 0.0015 19.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 gi|300710170|ref|YP_003735984.1| - 0.00062 19.6 0.0 0.0012 18.6 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|300710170|ref|YP_003735984.1| - 0.0016 18.9 0.3 0.03 14.7 0.2 2.8 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 gi|300710170|ref|YP_003735984.1| - 0.0018 17.4 0.0 0.0033 16.5 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_2 PF07724.14 gi|300710170|ref|YP_003735984.1| - 0.0034 17.5 0.3 0.0093 16.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|300710170|ref|YP_003735984.1| - 0.0034 16.9 0.0 0.0078 15.7 0.0 1.5 1 1 0 1 1 1 1 P-loop containing dynein motor region DUF815 PF05673.13 gi|300710170|ref|YP_003735984.1| - 0.0047 16.1 0.5 0.033 13.3 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|300710170|ref|YP_003735984.1| - 0.008 15.8 2.9 0.15 11.6 0.0 3.3 2 2 1 3 3 3 1 AAA domain AAA_17 PF13207.6 gi|300710170|ref|YP_003735984.1| - 0.011 16.1 0.0 0.03 14.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|300710170|ref|YP_003735984.1| - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|300710170|ref|YP_003735984.1| - 0.035 14.1 0.0 0.13 12.3 0.0 2.0 1 1 0 1 1 1 0 AAA domain SKI PF01202.22 gi|300710170|ref|YP_003735984.1| - 0.046 13.8 0.0 0.093 12.8 0.0 1.5 1 0 0 1 1 1 0 Shikimate kinase IstB_IS21 PF01695.17 gi|300710170|ref|YP_003735984.1| - 0.052 13.3 0.1 0.2 11.4 0.0 2.0 1 1 1 2 2 2 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|300710170|ref|YP_003735984.1| - 0.053 12.9 0.0 0.11 11.8 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|300710170|ref|YP_003735984.1| - 0.053 14.0 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 ABC transporter SRP54 PF00448.22 gi|300710170|ref|YP_003735984.1| - 0.057 13.1 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ResIII PF04851.15 gi|300710170|ref|YP_003735984.1| - 0.065 13.2 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 gi|300710170|ref|YP_003735984.1| - 0.071 13.5 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.23 gi|300710170|ref|YP_003735984.1| - 0.097 12.8 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase TIP49 PF06068.13 gi|300710170|ref|YP_003735984.1| - 0.1 11.8 0.0 0.25 10.5 0.0 1.6 1 1 0 1 1 1 0 TIP49 P-loop domain Rad17 PF03215.15 gi|300710170|ref|YP_003735984.1| - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_3 PF07726.11 gi|300710170|ref|YP_003735984.1| - 0.13 12.1 0.1 0.26 11.2 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|300710170|ref|YP_003735984.1| - 0.16 12.3 0.3 0.57 10.5 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|300710170|ref|YP_003735984.1| - 0.23 11.2 1.6 0.27 10.9 0.2 1.9 2 1 0 2 2 2 0 AAA domain MarR_2 PF12802.7 gi|300710171|ref|YP_003735985.1| - 1.9e-05 24.4 0.8 4.8e-05 23.2 0.8 1.6 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300710171|ref|YP_003735985.1| - 0.00012 22.1 1.8 0.00012 22.1 1.8 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain GntR PF00392.21 gi|300710171|ref|YP_003735985.1| - 0.0005 19.7 0.5 0.0013 18.3 0.5 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|300710171|ref|YP_003735985.1| - 0.0015 18.4 0.1 0.0031 17.4 0.1 1.5 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|300710171|ref|YP_003735985.1| - 0.0016 18.2 0.1 0.0033 17.3 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|300710171|ref|YP_003735985.1| - 0.0079 16.7 1.0 0.017 15.6 0.1 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|300710171|ref|YP_003735985.1| - 0.016 15.0 0.3 0.033 13.9 0.3 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|300710171|ref|YP_003735985.1| - 0.05 13.6 0.1 0.12 12.4 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300710171|ref|YP_003735985.1| - 0.11 12.7 0.0 0.26 11.5 0.0 1.6 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Thiolase_N PF00108.23 gi|300710172|ref|YP_003735986.1| - 6.4e-76 255.1 0.3 8.5e-76 254.7 0.3 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|300710172|ref|YP_003735986.1| - 4.5e-42 142.6 0.2 9.9e-42 141.5 0.0 1.6 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|300710172|ref|YP_003735986.1| - 3e-06 27.0 0.1 6.1e-06 26.0 0.1 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain HTH_7 PF02796.15 gi|300710172|ref|YP_003735986.1| - 0.064 13.3 0.0 0.3 11.2 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase ACP_syn_III_C PF08541.10 gi|300710172|ref|YP_003735986.1| - 0.073 13.2 0.0 0.23 11.6 0.0 1.9 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|300710172|ref|YP_003735986.1| - 0.18 11.6 5.5 0.57 10.1 0.1 2.8 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III zf-ribbon_3 PF13248.6 gi|300710173|ref|YP_003735987.1| - 0.0022 17.3 4.7 0.0047 16.3 4.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|300710173|ref|YP_003735987.1| - 0.0023 17.6 4.3 0.0047 16.6 4.3 1.5 1 0 0 1 1 1 1 zinc-ribbon domain HypA PF01155.19 gi|300710173|ref|YP_003735987.1| - 0.0045 17.0 0.2 0.007 16.4 0.2 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-FPG_IleRS PF06827.14 gi|300710173|ref|YP_003735987.1| - 0.0052 16.6 1.3 0.99 9.3 0.1 2.4 2 0 0 2 2 2 2 Zinc finger found in FPG and IleRS zinc_ribbon_15 PF17032.5 gi|300710173|ref|YP_003735987.1| - 0.0097 16.6 0.2 0.013 16.2 0.2 1.2 1 0 0 1 1 1 1 zinc-ribbon family DZR PF12773.7 gi|300710173|ref|YP_003735987.1| - 0.022 14.8 0.4 0.036 14.1 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon Anti-TRAP PF15777.5 gi|300710173|ref|YP_003735987.1| - 0.034 14.1 0.5 0.084 12.8 0.2 1.7 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein SLATT_1 PF18181.1 gi|300710173|ref|YP_003735987.1| - 0.11 12.4 0.3 0.15 11.9 0.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 zf-ISL3 PF14690.6 gi|300710173|ref|YP_003735987.1| - 0.12 13.1 1.7 0.31 11.7 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn-ribbon_8 PF09723.10 gi|300710173|ref|YP_003735987.1| - 1 9.5 5.2 3.7 7.7 5.2 1.9 1 1 0 1 1 1 0 Zinc ribbon domain DUF2062 PF09835.9 gi|300710174|ref|YP_003735988.1| - 0.00031 20.6 0.1 0.00032 20.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) DUF2062 PF09835.9 gi|300710175|ref|YP_003735989.1| - 1.1e-06 28.6 0.1 1.2e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Glycos_transf_1 PF00534.20 gi|300710176|ref|YP_003735990.1| - 1e-21 77.3 0.0 1.4e-21 76.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300710176|ref|YP_003735990.1| - 1.9e-19 70.4 0.0 3.7e-19 69.5 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300710176|ref|YP_003735990.1| - 4.3e-17 62.6 1.7 7.9e-17 61.8 0.6 1.9 1 1 1 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|300710176|ref|YP_003735990.1| - 1.1e-14 55.2 1.0 1.1e-14 55.2 1.0 2.2 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|300710176|ref|YP_003735990.1| - 3.3e-08 33.6 0.1 6.9e-07 29.4 0.1 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|300710176|ref|YP_003735990.1| - 0.00063 20.1 0.0 0.0015 18.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300710177|ref|YP_003735991.1| - 1.1e-15 58.3 0.0 5.6e-14 52.7 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300710177|ref|YP_003735991.1| - 9.5e-13 48.5 0.0 1.7e-12 47.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|300710177|ref|YP_003735991.1| - 4.4e-12 45.9 0.0 4e-11 42.8 0.0 2.6 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|300710177|ref|YP_003735991.1| - 1.9e-06 28.4 0.0 3.4e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|300710177|ref|YP_003735991.1| - 0.055 13.9 0.1 0.13 12.6 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferases group 1 Metalloenzyme PF01676.18 gi|300710178|ref|YP_003735992.1| - 0.02 14.3 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 Metalloenzyme superfamily PglZ PF08665.12 gi|300710178|ref|YP_003735992.1| - 0.079 13.1 0.0 0.32 11.1 0.0 1.9 2 0 0 2 2 2 0 PglZ domain Sulfatase PF00884.23 gi|300710179|ref|YP_003735993.1| - 3e-45 155.0 0.0 4e-45 154.5 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|300710179|ref|YP_003735993.1| - 1.6e-12 47.7 0.5 2.3e-06 27.4 0.1 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 gi|300710179|ref|YP_003735993.1| - 0.28 9.7 0.0 0.35 9.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF229) LPG_synthase_TM PF03706.13 gi|300710180|ref|YP_003735994.1| - 2.6e-39 135.5 45.1 3.5e-39 135.1 45.1 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF202 PF02656.15 gi|300710180|ref|YP_003735994.1| - 0.028 14.9 3.9 0.028 14.9 3.9 4.5 4 0 0 4 4 4 0 Domain of unknown function (DUF202) TM_helix PF05552.12 gi|300710180|ref|YP_003735994.1| - 2.5 8.1 12.5 8.9 6.4 0.2 4.1 2 1 1 3 3 3 0 Conserved TM helix SNARE_assoc PF09335.11 gi|300710181|ref|YP_003735995.1| - 7.5e-13 49.0 2.0 1.2e-12 48.4 2.0 1.3 1 0 0 1 1 1 1 SNARE associated Golgi protein Cytochrom_C_asm PF01578.20 gi|300710182|ref|YP_003735996.1| - 0.014 15.2 3.0 0.015 15.1 3.0 1.0 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF1129 PF06570.11 gi|300710182|ref|YP_003735996.1| - 0.39 10.2 4.5 0.39 10.2 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) HTH_3 PF01381.22 gi|300710183|ref|YP_003735997.1| - 4.8e-16 58.6 0.0 5.4e-16 58.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|300710183|ref|YP_003735997.1| - 4e-11 43.1 0.0 4.9e-11 42.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|300710183|ref|YP_003735997.1| - 4.8e-09 36.1 0.0 6.1e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|300710183|ref|YP_003735997.1| - 1.1e-08 35.4 0.0 1.3e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|300710183|ref|YP_003735997.1| - 0.00025 20.5 0.1 0.00052 19.5 0.1 1.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|300710183|ref|YP_003735997.1| - 0.00048 20.0 0.0 0.0049 16.8 0.1 2.0 2 0 0 2 2 2 1 HTH domain HTH_25 PF13413.6 gi|300710183|ref|YP_003735997.1| - 0.00071 19.4 0.1 0.00087 19.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300710183|ref|YP_003735997.1| - 0.004 17.0 0.2 0.0066 16.3 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|300710183|ref|YP_003735997.1| - 0.0062 16.5 0.0 0.018 15.0 0.1 1.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|300710183|ref|YP_003735997.1| - 0.008 15.7 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Phage_CI_repr PF07022.13 gi|300710183|ref|YP_003735997.1| - 0.016 15.2 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|300710183|ref|YP_003735997.1| - 0.019 14.8 0.0 0.028 14.3 0.0 1.4 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_23 PF13384.6 gi|300710183|ref|YP_003735997.1| - 0.12 12.2 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_37 PF13744.6 gi|300710183|ref|YP_003735997.1| - 0.12 12.3 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|300710183|ref|YP_003735997.1| - 0.16 12.1 0.1 0.22 11.7 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Arylsulfotran_2 PF14269.6 gi|300710184|ref|YP_003735998.1| - 9.8e-08 31.7 2.2 2.1e-06 27.3 1.2 2.7 2 1 0 2 2 2 1 Arylsulfotransferase (ASST) Arylsulfotrans PF05935.11 gi|300710184|ref|YP_003735998.1| - 1.8e-07 30.4 1.3 1.9e-06 27.1 0.4 2.3 1 1 0 2 2 2 1 Arylsulfotransferase (ASST) NHL PF01436.21 gi|300710184|ref|YP_003735998.1| - 0.021 14.9 2.3 15 5.9 0.0 3.8 3 0 0 3 3 3 0 NHL repeat DUF4307 PF14155.6 gi|300710184|ref|YP_003735998.1| - 0.59 10.0 3.1 7.6 6.4 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4307) DUF21 PF01595.20 gi|300710185|ref|YP_003735999.1| - 1.9e-30 105.8 0.3 2.7e-30 105.4 0.3 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 gi|300710185|ref|YP_003735999.1| - 2e-11 44.1 1.0 3e-07 30.8 0.2 2.5 2 0 0 2 2 2 2 CBS domain DinB_2 PF12867.7 gi|300710185|ref|YP_003735999.1| - 0.064 13.8 0.1 0.51 10.9 0.0 2.2 2 0 0 2 2 2 0 DinB superfamily Usp PF00582.26 gi|300710186|ref|YP_003736000.1| - 8.1e-26 91.2 2.0 9e-26 91.1 2.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Cofac_haem_bdg PF04187.13 gi|300710186|ref|YP_003736000.1| - 0.023 14.7 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 Haem-binding uptake, Tiki superfamily, ChaN RNA_lig_T4_1 PF09511.10 gi|300710186|ref|YP_003736000.1| - 0.023 14.5 0.0 0.028 14.3 0.0 1.0 1 0 0 1 1 1 0 RNA ligase ADH_zinc_N PF00107.26 gi|300710186|ref|YP_003736000.1| - 0.031 14.3 0.3 0.046 13.7 0.2 1.3 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF2783 PF10932.8 gi|300710187|ref|YP_003736001.1| - 0.13 11.9 0.4 1.6 8.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2783) GST_N_3 PF13417.6 gi|300710188|ref|YP_003736002.1| - 4.6e-15 55.8 0.0 5.2e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 gi|300710188|ref|YP_003736002.1| - 5.9e-13 48.9 0.0 6.9e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 gi|300710188|ref|YP_003736002.1| - 1.9e-12 47.2 0.0 2.5e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N PF02798.20 gi|300710188|ref|YP_003736002.1| - 7.5e-06 26.2 0.0 8.9e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|300710188|ref|YP_003736002.1| - 0.15 12.5 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) AhpC-TSA PF00578.21 gi|300710189|ref|YP_003736003.1| - 1.2e-21 76.9 0.0 1.5e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|300710189|ref|YP_003736003.1| - 4.2e-09 36.3 0.0 1.1e-08 34.9 0.0 1.6 1 1 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|300710189|ref|YP_003736003.1| - 0.0011 19.1 0.0 0.022 14.9 0.0 2.1 1 1 1 2 2 2 1 AhpC/TSA antioxidant enzyme HAD_2 PF13419.6 gi|300710190|ref|YP_003736004.1| - 7.6e-14 52.2 0.0 9.2e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300710190|ref|YP_003736004.1| - 3e-10 40.8 0.3 7.6e-10 39.4 0.3 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300710190|ref|YP_003736004.1| - 7.4e-05 23.2 0.3 9.1e-05 22.9 0.3 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710190|ref|YP_003736004.1| - 9.3e-05 22.4 0.1 0.0024 17.9 0.0 2.9 3 0 0 3 3 3 1 HAD-hyrolase-like Put_Phosphatase PF06888.12 gi|300710190|ref|YP_003736004.1| - 0.12 11.8 0.0 0.25 10.7 0.0 1.5 2 0 0 2 2 2 0 Putative Phosphatase Hydrolase_6 PF13344.6 gi|300710190|ref|YP_003736004.1| - 0.15 12.2 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase adh_short_C2 PF13561.6 gi|300710191|ref|YP_003736005.1| - 8.9e-35 120.3 3.7 1.5e-34 119.6 3.7 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300710191|ref|YP_003736005.1| - 2e-30 105.7 1.0 2.5e-30 105.4 1.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300710191|ref|YP_003736005.1| - 0.00011 22.2 2.8 0.00036 20.5 2.8 1.8 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300710191|ref|YP_003736005.1| - 0.0025 17.3 0.4 0.0073 15.8 0.3 1.8 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family AFOR_C PF01314.18 gi|300710193|ref|YP_003736007.1| - 1.4e-76 258.0 0.2 2.4e-76 257.2 0.2 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|300710193|ref|YP_003736007.1| - 2.7e-65 220.0 0.0 4.5e-65 219.2 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain SSF PF00474.17 gi|300710194|ref|YP_003736008.1| - 2.1e-46 158.6 36.7 3.3e-46 158.0 36.7 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family ABA_WDS PF02496.16 gi|300710194|ref|YP_003736008.1| - 0.14 12.7 0.8 17 6.0 0.0 2.4 2 0 0 2 2 2 0 ABA/WDS induced protein Arginase PF00491.21 gi|300710195|ref|YP_003736009.1| - 3.4e-77 259.7 0.3 4.1e-77 259.4 0.3 1.1 1 0 0 1 1 1 1 Arginase family DUF2391 PF09622.10 gi|300710196|ref|YP_003736010.1| - 1.4e-07 31.1 0.3 1.8e-07 30.8 0.3 1.0 1 0 0 1 1 1 1 Putative integral membrane protein (DUF2391) Na_H_Exchanger PF00999.21 gi|300710197|ref|YP_003736011.1| - 2e-39 135.5 43.2 2.5e-39 135.1 43.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|300710197|ref|YP_003736011.1| - 6.5e-31 107.0 0.7 6.5e-31 107.0 0.7 1.9 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.21 gi|300710197|ref|YP_003736011.1| - 3e-10 39.8 0.3 3.6e-09 36.3 0.0 2.5 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|300710197|ref|YP_003736011.1| - 2e-08 34.6 0.2 4.6e-08 33.4 0.2 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|300710197|ref|YP_003736011.1| - 1.2e-06 28.0 0.2 1.7e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_10 PF13460.6 gi|300710197|ref|YP_003736011.1| - 2.9e-05 24.0 3.4 7.1e-05 22.8 2.8 1.8 1 1 1 2 2 2 1 NAD(P)H-binding ApbA PF02558.16 gi|300710197|ref|YP_003736011.1| - 5.7e-05 22.8 0.1 0.00012 21.7 0.1 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|300710197|ref|YP_003736011.1| - 0.0003 21.3 1.5 0.0033 18.0 0.1 2.7 2 1 1 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent DAO PF01266.24 gi|300710197|ref|YP_003736011.1| - 0.0019 17.8 0.1 0.0039 16.8 0.1 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|300710197|ref|YP_003736011.1| - 0.004 17.4 0.3 0.0086 16.3 0.3 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|300710197|ref|YP_003736011.1| - 0.0064 16.4 0.1 0.014 15.3 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|300710197|ref|YP_003736011.1| - 0.014 16.0 0.2 0.047 14.3 0.2 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DFP PF04127.15 gi|300710197|ref|YP_003736011.1| - 0.014 15.2 0.2 0.029 14.2 0.2 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein UDPG_MGDP_dh_N PF03721.14 gi|300710197|ref|YP_003736011.1| - 0.027 14.0 0.0 0.048 13.2 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Epimerase PF01370.21 gi|300710197|ref|YP_003736011.1| - 0.037 13.5 0.1 0.06 12.8 0.1 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_2 PF03446.15 gi|300710197|ref|YP_003736011.1| - 0.05 13.8 0.0 0.09 12.9 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|300710197|ref|YP_003736011.1| - 0.08 13.0 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase AMP-binding PF00501.28 gi|300710198|ref|YP_003736012.1| - 1.2e-98 330.6 0.0 1.4e-98 330.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300710198|ref|YP_003736012.1| - 0.08 13.9 0.1 0.41 11.6 0.1 2.3 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain Lactamase_B PF00753.27 gi|300710200|ref|YP_003736014.1| - 2.4e-26 93.0 6.4 3.1e-26 92.6 6.4 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300710200|ref|YP_003736014.1| - 0.00022 20.8 0.1 0.00034 20.2 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Seryl_tRNA_N PF02403.22 gi|300710201|ref|YP_003736015.1| - 3.3e-27 94.8 3.2 5.2e-27 94.2 3.2 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain tRNA-synt_2b PF00587.25 gi|300710201|ref|YP_003736015.1| - 4.5e-26 91.9 0.0 6.4e-26 91.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HAP1_N PF04849.13 gi|300710201|ref|YP_003736015.1| - 0.017 14.3 6.3 0.034 13.3 6.3 1.4 1 0 0 1 1 1 0 HAP1 N-terminal conserved region GAS PF13851.6 gi|300710201|ref|YP_003736015.1| - 0.058 12.7 2.1 1.1 8.6 2.3 2.2 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding TMF_TATA_bd PF12325.8 gi|300710201|ref|YP_003736015.1| - 0.11 12.7 8.7 0.12 12.6 7.0 1.8 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding FapA PF03961.13 gi|300710201|ref|YP_003736015.1| - 0.39 9.3 2.2 0.58 8.7 2.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A ZapB PF06005.12 gi|300710201|ref|YP_003736015.1| - 0.71 10.4 15.1 1.3 9.5 5.2 2.7 2 1 1 3 3 3 0 Cell division protein ZapB UPF0184 PF03670.13 gi|300710201|ref|YP_003736015.1| - 0.86 10.0 4.1 1.4 9.3 3.4 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) TPR_MLP1_2 PF07926.12 gi|300710201|ref|YP_003736015.1| - 1.8 8.6 10.0 3.4 7.7 10.0 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Spc24 PF08286.11 gi|300710201|ref|YP_003736015.1| - 3.1 8.1 6.7 10 6.4 2.7 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DivIC PF04977.15 gi|300710201|ref|YP_003736015.1| - 3.5 7.5 7.8 2.3 8.0 1.3 2.3 1 1 1 2 2 2 0 Septum formation initiator MFS_1 PF07690.16 gi|300710202|ref|YP_003736016.1| - 1.9e-22 79.7 52.8 1.7e-16 60.1 24.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4536 PF15055.6 gi|300710202|ref|YP_003736016.1| - 1.1 9.6 4.6 11 6.4 0.3 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4536) SnoaL_2 PF12680.7 gi|300710203|ref|YP_003736017.1| - 3.8e-12 46.8 1.1 4.2e-12 46.6 1.1 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|300710203|ref|YP_003736017.1| - 5.6e-05 22.9 0.1 6.5e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase DUF4440 PF14534.6 gi|300710203|ref|YP_003736017.1| - 6.2e-05 23.4 0.1 7.9e-05 23.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_4 PF13577.6 gi|300710203|ref|YP_003736017.1| - 0.0049 17.0 0.1 0.0064 16.6 0.1 1.2 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.20 gi|300710203|ref|YP_003736017.1| - 0.017 15.7 0.0 0.018 15.6 0.0 1.2 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain SnoaL_3 PF13474.6 gi|300710203|ref|YP_003736017.1| - 0.1 12.9 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain Ribo_biogen_C PF04034.13 gi|300710204|ref|YP_003736018.1| - 7.9e-46 154.9 0.0 9.4e-46 154.7 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|300710204|ref|YP_003736018.1| - 7.7e-10 38.4 0.0 1.1e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI DTW PF03942.15 gi|300710204|ref|YP_003736018.1| - 0.2 11.3 0.0 0.88 9.2 0.0 1.8 1 1 0 1 1 1 0 DTW domain DUF3311 PF11755.8 gi|300710205|ref|YP_003736019.1| - 6.5e-14 51.6 19.2 7.9e-14 51.4 19.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) TRAP-gamma PF07074.12 gi|300710205|ref|YP_003736019.1| - 0.058 12.9 0.6 0.075 12.6 0.3 1.3 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) SSF PF00474.17 gi|300710206|ref|YP_003736020.1| - 2.2e-43 148.7 23.5 3.2e-43 148.1 23.5 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Ribosomal_L40e PF01020.17 gi|300710207|ref|YP_003736021.1| - 3.8e-06 26.7 4.0 4.8e-06 26.4 4.0 1.2 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|300710207|ref|YP_003736021.1| - 0.00024 20.7 3.8 0.00026 20.6 3.6 1.2 1 1 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|300710207|ref|YP_003736021.1| - 0.00068 19.6 1.8 0.00071 19.6 1.8 1.1 1 0 0 1 1 1 1 Double zinc ribbon zf-RanBP PF00641.18 gi|300710207|ref|YP_003736021.1| - 0.011 15.0 1.4 0.015 14.6 1.4 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DNA_RNApol_7kD PF03604.13 gi|300710207|ref|YP_003736021.1| - 0.017 14.8 5.8 0.036 13.8 5.8 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF1936 PF09151.10 gi|300710207|ref|YP_003736021.1| - 0.037 13.9 3.0 0.29 11.1 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) zf-ribbon_3 PF13248.6 gi|300710207|ref|YP_003736021.1| - 0.15 11.5 4.2 0.2 11.1 4.2 1.2 1 0 0 1 1 1 0 zinc-ribbon domain PhoU PF01895.19 gi|300710208|ref|YP_003736022.1| - 1.2e-35 121.8 13.6 2.9e-21 75.7 2.2 2.2 2 0 0 2 2 2 2 PhoU domain PNPase PF03726.14 gi|300710208|ref|YP_003736022.1| - 0.016 15.7 0.4 0.016 15.7 0.4 2.3 2 1 0 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain SIS_2 PF13580.6 gi|300710208|ref|YP_003736022.1| - 0.097 12.7 0.1 0.3 11.1 0.0 1.9 2 1 0 2 2 2 0 SIS domain ABC_tran PF00005.27 gi|300710209|ref|YP_003736023.1| - 6.5e-31 107.7 0.0 1.1e-30 107.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710209|ref|YP_003736023.1| - 1.9e-11 44.3 0.0 4.2e-05 23.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300710209|ref|YP_003736023.1| - 5.5e-10 39.0 0.1 4.1e-09 36.2 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|300710209|ref|YP_003736023.1| - 2.1e-05 24.4 0.0 0.0015 18.3 0.0 2.2 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|300710209|ref|YP_003736023.1| - 0.00012 22.4 0.0 0.00032 21.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|300710209|ref|YP_003736023.1| - 0.00023 21.1 0.0 0.00038 20.4 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|300710209|ref|YP_003736023.1| - 0.00048 19.8 0.0 0.0011 18.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|300710209|ref|YP_003736023.1| - 0.00051 20.6 0.0 0.0015 19.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|300710209|ref|YP_003736023.1| - 0.00071 19.5 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|300710209|ref|YP_003736023.1| - 0.0021 17.8 0.2 0.025 14.3 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300710209|ref|YP_003736023.1| - 0.0031 17.9 0.1 0.01 16.2 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|300710209|ref|YP_003736023.1| - 0.0082 15.7 0.0 0.065 12.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|300710209|ref|YP_003736023.1| - 0.022 15.3 0.0 0.057 14.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_33 PF13671.6 gi|300710209|ref|YP_003736023.1| - 0.022 14.9 0.0 0.045 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain DeoRC PF00455.22 gi|300710209|ref|YP_003736023.1| - 0.026 14.5 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 DeoR C terminal sensor domain NB-ARC PF00931.22 gi|300710209|ref|YP_003736023.1| - 0.029 13.5 0.0 0.058 12.6 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain PRK PF00485.18 gi|300710209|ref|YP_003736023.1| - 0.034 13.9 0.0 0.057 13.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ABC_ATPase PF09818.9 gi|300710209|ref|YP_003736023.1| - 0.042 12.7 0.0 0.69 8.6 0.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class NACHT PF05729.12 gi|300710209|ref|YP_003736023.1| - 0.044 13.7 0.0 0.083 12.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 gi|300710209|ref|YP_003736023.1| - 0.045 13.7 0.0 0.36 10.7 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|300710209|ref|YP_003736023.1| - 0.056 13.2 0.0 0.17 11.6 0.0 1.8 2 1 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 gi|300710209|ref|YP_003736023.1| - 0.093 11.5 0.0 0.91 8.2 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein Relaxase PF03432.14 gi|300710209|ref|YP_003736023.1| - 0.095 12.3 0.0 0.22 11.1 0.0 1.6 2 0 0 2 2 2 0 Relaxase/Mobilisation nuclease domain AAA_28 PF13521.6 gi|300710209|ref|YP_003736023.1| - 0.096 12.9 0.0 0.27 11.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|300710209|ref|YP_003736023.1| - 0.13 12.7 0.0 1.4 9.3 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|300710209|ref|YP_003736023.1| - 0.14 12.5 0.0 0.33 11.4 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Viral_helicase1 PF01443.18 gi|300710209|ref|YP_003736023.1| - 0.18 11.5 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase BPD_transp_1 PF00528.22 gi|300710210|ref|YP_003736024.1| - 9.6e-22 77.6 18.5 9.6e-22 77.6 18.5 2.2 1 1 1 2 2 2 2 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|300710211|ref|YP_003736025.1| - 1e-19 71.0 17.4 1e-19 71.0 17.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component PBP_like_2 PF12849.7 gi|300710212|ref|YP_003736026.1| - 7e-24 85.0 0.2 1.1e-23 84.3 0.2 1.3 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|300710212|ref|YP_003736026.1| - 1.4e-21 76.5 0.0 2.6e-21 75.7 0.0 1.4 2 0 0 2 2 2 1 PBP superfamily domain Eno-Rase_NADH_b PF12242.8 gi|300710212|ref|YP_003736026.1| - 0.077 12.8 0.2 0.15 11.9 0.2 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PhoU PF01895.19 gi|300710213|ref|YP_003736027.1| - 2.8e-21 75.8 12.1 1.8e-17 63.6 1.3 2.3 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|300710213|ref|YP_003736027.1| - 5.1e-10 39.0 0.0 1.1e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Met_asp_mut_E PF06368.11 gi|300710213|ref|YP_003736027.1| - 0.013 14.0 0.1 0.023 13.2 0.1 1.3 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) DUF1771 PF08590.10 gi|300710213|ref|YP_003736027.1| - 0.015 15.6 0.2 0.04 14.3 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1771) Ribosomal_S8e PF01201.22 gi|300710214|ref|YP_003736028.1| - 2.9e-31 108.5 3.4 3.6e-31 108.2 3.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e DUF2240 PF09999.9 gi|300710215|ref|YP_003736029.1| - 2.5e-45 153.7 0.1 2.8e-45 153.5 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) HAD_2 PF13419.6 gi|300710217|ref|YP_003736031.1| - 8.9e-25 87.8 0.0 1.1e-24 87.5 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300710217|ref|YP_003736031.1| - 3.8e-15 56.7 0.9 8.6e-14 52.3 0.9 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710217|ref|YP_003736031.1| - 2.4e-14 53.1 0.4 1e-13 51.2 0.1 2.0 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|300710217|ref|YP_003736031.1| - 5.4e-06 26.9 0.2 6.9e-06 26.6 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase OMPdecase PF00215.24 gi|300710218|ref|YP_003736032.1| - 6.4e-32 111.0 0.0 8.1e-32 110.6 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Inositol_P PF00459.25 gi|300710219|ref|YP_003736033.1| - 2.4e-50 171.5 1.7 2.8e-50 171.4 1.7 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|300710219|ref|YP_003736033.1| - 0.0026 17.3 0.0 0.0039 16.7 0.0 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain tRNA-synt_His PF13393.6 gi|300710220|ref|YP_003736034.1| - 6.7e-54 183.2 0.2 8.5e-54 182.9 0.2 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|300710220|ref|YP_003736034.1| - 2.3e-15 56.5 0.0 4.6e-15 55.5 0.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|300710220|ref|YP_003736034.1| - 3.5e-07 30.4 0.0 6.9e-07 29.4 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 gi|300710220|ref|YP_003736034.1| - 0.13 11.7 0.0 0.3 10.5 0.0 1.4 1 1 0 1 1 1 0 tRNA synthetases class II core domain (F) EamA PF00892.20 gi|300710221|ref|YP_003736035.1| - 6.9e-22 78.1 35.8 6.5e-12 45.8 19.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 gi|300710221|ref|YP_003736035.1| - 0.11 12.5 0.4 0.11 12.5 0.4 3.0 3 1 0 3 3 3 0 Putative transmembrane family 234 TPT PF03151.16 gi|300710221|ref|YP_003736035.1| - 9 5.5 17.1 0.43 9.9 0.3 2.6 2 1 0 2 2 2 0 Triose-phosphate Transporter family Asn_synthase PF00733.21 gi|300710222|ref|YP_003736036.1| - 0.052 13.2 0.2 0.077 12.6 0.2 1.3 1 0 0 1 1 1 0 Asparagine synthase dsDNA_bind PF01984.20 gi|300710223|ref|YP_003736037.1| - 7.3e-28 97.1 16.0 8.3e-28 96.9 16.0 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain PCI PF01399.27 gi|300710223|ref|YP_003736037.1| - 0.054 14.0 0.2 0.09 13.3 0.2 1.7 1 1 0 1 1 1 0 PCI domain cwf18 PF08315.12 gi|300710223|ref|YP_003736037.1| - 0.061 14.0 10.2 0.076 13.7 10.2 1.0 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor MSC PF09402.10 gi|300710223|ref|YP_003736037.1| - 0.078 12.4 4.1 0.083 12.3 4.1 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain RMI1_N PF08585.12 gi|300710223|ref|YP_003736037.1| - 0.26 11.0 6.0 0.35 10.6 5.8 1.3 1 1 0 1 1 1 0 RecQ mediated genome instability protein T3SSipB PF16535.5 gi|300710223|ref|YP_003736037.1| - 0.48 10.9 13.0 0.3 11.5 10.5 1.7 1 1 1 2 2 2 0 Type III cell invasion protein SipB DUF1178 PF06676.11 gi|300710223|ref|YP_003736037.1| - 0.54 10.6 6.0 0.7 10.3 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Ribosomal_S19e PF01090.19 gi|300710224|ref|YP_003736038.1| - 2.2e-45 153.7 0.0 2.5e-45 153.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 gi|300710224|ref|YP_003736038.1| - 0.0073 16.2 0.0 0.024 14.6 0.0 1.9 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain PAC4 PF16093.5 gi|300710224|ref|YP_003736038.1| - 0.065 13.4 0.0 0.17 12.1 0.0 1.7 2 0 0 2 2 2 0 Proteasome assembly chaperone 4 AIRS PF00586.24 gi|300710225|ref|YP_003736039.1| - 4.9e-17 62.4 4.5 9.5e-17 61.5 3.7 1.9 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|300710225|ref|YP_003736039.1| - 6.3e-10 39.4 0.1 1.1e-09 38.6 0.1 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Peptidase_M50 PF02163.22 gi|300710226|ref|YP_003736040.1| - 1.1e-13 51.1 11.5 2e-06 27.2 0.2 2.4 1 1 1 2 2 2 2 Peptidase family M50 DUF4516 PF14990.6 gi|300710226|ref|YP_003736040.1| - 0.14 11.9 0.3 0.3 10.9 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) MoaE PF02391.17 gi|300710228|ref|YP_003736042.1| - 3.5e-25 88.5 0.2 5.8e-25 87.8 0.2 1.3 1 0 0 1 1 1 1 MoaE protein MobB PF03205.14 gi|300710228|ref|YP_003736042.1| - 4.9e-05 23.3 0.0 0.00017 21.5 0.0 1.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B TPR_15 PF13429.6 gi|300710228|ref|YP_003736042.1| - 0.11 11.7 0.0 0.73 9.0 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat AA_kinase PF00696.28 gi|300710229|ref|YP_003736043.1| - 5.4e-28 98.2 3.3 1e-27 97.3 3.3 1.4 1 1 0 1 1 1 1 Amino acid kinase family tRNA-synt_1f PF01921.18 gi|300710230|ref|YP_003736044.1| - 4.2e-98 328.6 0.0 5.7e-98 328.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|300710230|ref|YP_003736044.1| - 3.4e-08 32.6 0.0 9.8e-06 24.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|300710230|ref|YP_003736044.1| - 0.0023 17.4 0.0 0.013 14.9 0.0 2.1 3 0 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.25 gi|300710230|ref|YP_003736044.1| - 0.045 13.1 0.0 8.8 5.5 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) HypA PF01155.19 gi|300710231|ref|YP_003736045.1| - 0.031 14.3 0.2 0.031 14.3 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADK_lid PF05191.14 gi|300710231|ref|YP_003736045.1| - 0.031 14.3 1.3 0.049 13.6 1.3 1.4 1 1 0 1 1 1 0 Adenylate kinase, active site lid PhnA_Zn_Ribbon PF08274.12 gi|300710231|ref|YP_003736045.1| - 0.081 12.9 1.2 0.95 9.5 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_6 PF14599.6 gi|300710231|ref|YP_003736045.1| - 0.088 12.8 0.4 0.34 10.9 0.4 1.8 1 1 1 2 2 2 0 Zinc-ribbon zf-C2H2_4 PF13894.6 gi|300710231|ref|YP_003736045.1| - 0.12 13.2 0.4 2.1 9.4 0.0 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger zinc_ribbon_4 PF13717.6 gi|300710231|ref|YP_003736045.1| - 0.15 12.0 1.3 0.59 10.1 1.2 1.9 1 1 2 3 3 3 0 zinc-ribbon domain DUF2310 PF10071.9 gi|300710231|ref|YP_003736045.1| - 0.3 10.3 1.4 0.38 10.0 1.4 1.1 1 0 0 1 1 1 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) zf_UBZ PF18439.1 gi|300710231|ref|YP_003736045.1| - 0.92 9.2 5.5 0.75 9.4 1.1 2.3 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger PDZ_2 PF13180.6 gi|300710232|ref|YP_003736046.1| - 4.4e-23 81.4 4.8 6.8e-08 32.7 0.3 3.3 1 1 2 3 3 3 3 PDZ domain Peptidase_M50 PF02163.22 gi|300710232|ref|YP_003736046.1| - 1.5e-22 80.1 0.0 8.4e-22 77.6 0.0 2.0 1 1 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 gi|300710232|ref|YP_003736046.1| - 1.2e-19 69.8 5.9 2.5e-08 33.6 1.1 3.5 3 0 0 3 3 3 3 PDZ domain Tricorn_PDZ PF14685.6 gi|300710232|ref|YP_003736046.1| - 2.7e-10 40.1 8.9 0.0018 18.2 0.1 3.8 3 1 1 4 4 4 3 Tricorn protease PDZ domain PDZ PF00595.24 gi|300710232|ref|YP_003736046.1| - 1.3e-08 35.1 3.9 0.0051 17.1 0.2 3.5 2 1 1 3 3 3 2 PDZ domain DUF2583 PF10762.9 gi|300710232|ref|YP_003736046.1| - 0.5 10.8 2.2 1.3 9.5 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2583) PadR PF03551.14 gi|300710233|ref|YP_003736047.1| - 3.3e-23 81.4 0.2 5.6e-23 80.7 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|300710233|ref|YP_003736047.1| - 0.037 14.7 0.0 0.055 14.1 0.0 1.3 1 0 0 1 1 1 0 Replication terminator protein DUF1007 PF06226.13 gi|300710233|ref|YP_003736047.1| - 0.11 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1007) DUF505 PF04458.12 gi|300710233|ref|YP_003736047.1| - 0.19 10.0 0.3 0.26 9.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Chlor_dismutase PF06778.12 gi|300710235|ref|YP_003736049.1| - 8e-69 231.1 0.1 2.5e-68 229.5 0.0 1.9 2 0 0 2 2 2 1 Chlorite dismutase ABM PF03992.16 gi|300710235|ref|YP_003736049.1| - 9.5e-16 57.7 4.7 2.3e-11 43.6 0.1 4.5 4 0 0 4 4 4 3 Antibiotic biosynthesis monooxygenase DAPDH_C PF16654.5 gi|300710235|ref|YP_003736049.1| - 0.11 12.3 0.0 9.6 6.0 0.0 2.3 2 0 0 2 2 2 0 Diaminopimelic acid dehydrogenase C-terminal domain EII-Sor PF03609.14 gi|300710236|ref|YP_003736050.1| - 0.019 14.4 5.6 0.02 14.3 5.6 1.1 1 0 0 1 1 1 0 PTS system sorbose-specific iic component Eno-Rase_NADH_b PF12242.8 gi|300710236|ref|YP_003736050.1| - 0.6 9.9 3.1 0.68 9.7 2.6 1.3 1 1 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Aldo_ket_red PF00248.21 gi|300710237|ref|YP_003736051.1| - 1.1e-54 185.6 0.0 1.3e-54 185.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Hexapep PF00132.24 gi|300710238|ref|YP_003736052.1| - 4.6e-07 29.3 6.1 0.0023 17.6 0.1 3.6 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300710238|ref|YP_003736052.1| - 0.0074 16.0 4.1 0.3 10.9 0.4 2.9 3 1 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Nmad3 PF18754.1 gi|300710239|ref|YP_003736053.1| - 8.1e-55 186.1 0.0 9.1e-55 185.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotide modification associated domain 3 NAD_synthase PF02540.17 gi|300710242|ref|YP_003736056.1| - 2.4e-77 259.3 0.0 2.8e-77 259.1 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|300710242|ref|YP_003736056.1| - 3.1e-06 26.2 0.0 0.0052 15.6 0.0 2.3 2 1 0 2 2 2 2 tRNA methyl transferase QueC PF06508.13 gi|300710242|ref|YP_003736056.1| - 0.0091 15.5 0.0 0.035 13.6 0.0 1.8 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC CryBP1 PF07029.11 gi|300710242|ref|YP_003736056.1| - 0.012 15.7 0.6 2.2 8.3 0.2 2.3 1 1 1 2 2 2 0 CryBP1 protein YAcAr PF10686.9 gi|300710242|ref|YP_003736056.1| - 0.051 13.5 0.5 20 5.2 0.1 3.0 3 0 0 3 3 3 0 YspA, cpYpsA-related SLOG family Asn_synthase PF00733.21 gi|300710242|ref|YP_003736056.1| - 0.08 12.6 0.0 0.09 12.4 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase DUF3530 PF12048.8 gi|300710242|ref|YP_003736056.1| - 0.13 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) ECH_1 PF00378.20 gi|300710243|ref|YP_003736057.1| - 5.6e-40 137.2 0.0 6.5e-40 137.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|300710243|ref|YP_003736057.1| - 4e-23 82.5 0.0 4.7e-23 82.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase zf-C2H2 PF00096.26 gi|300710245|ref|YP_003736059.1| - 0.00038 20.8 0.2 0.001 19.4 0.2 1.7 1 1 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 gi|300710245|ref|YP_003736059.1| - 0.0028 17.6 0.3 0.0041 17.1 0.3 1.4 1 1 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 gi|300710245|ref|YP_003736059.1| - 0.012 16.4 0.2 0.019 15.7 0.2 1.5 1 1 0 1 1 1 0 C2H2-type zinc finger zf-Di19 PF05605.12 gi|300710245|ref|YP_003736059.1| - 0.015 15.6 0.1 0.019 15.2 0.1 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Actin_micro PF17003.5 gi|300710245|ref|YP_003736059.1| - 0.019 14.2 0.2 0.019 14.2 0.2 1.0 1 0 0 1 1 1 0 Putative actin-like family zf_C2H2_ZHX PF18387.1 gi|300710245|ref|YP_003736059.1| - 0.022 14.4 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain DUF629 PF04780.12 gi|300710245|ref|YP_003736059.1| - 0.023 13.2 0.2 0.025 13.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Zn-ribbon_8 PF09723.10 gi|300710245|ref|YP_003736059.1| - 0.024 14.8 0.9 0.026 14.6 0.9 1.3 1 1 0 1 1 1 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|300710245|ref|YP_003736059.1| - 0.043 13.4 0.2 0.043 13.4 0.2 1.6 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-C2H2_3rep PF18868.1 gi|300710245|ref|YP_003736059.1| - 0.053 14.2 0.1 0.055 14.1 0.1 1.1 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats Pterin_4a PF01329.19 gi|300710246|ref|YP_003736060.1| - 2e-25 88.8 0.1 2.4e-25 88.5 0.1 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase PhaG_MnhG_YufB PF03334.14 gi|300710247|ref|YP_003736061.1| - 5.1e-23 81.1 10.1 6.5e-23 80.8 10.1 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit YlaH PF14036.6 gi|300710247|ref|YP_003736061.1| - 0.67 10.3 4.0 0.22 11.9 0.8 1.9 2 0 0 2 2 2 0 YlaH-like protein MrpF_PhaF PF04066.13 gi|300710248|ref|YP_003736062.1| - 1.7e-15 57.1 7.9 1.7e-15 57.1 7.9 1.9 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) DUF5336 PF17270.2 gi|300710248|ref|YP_003736062.1| - 0.66 9.6 9.3 0.76 9.4 9.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5336) MNHE PF01899.16 gi|300710249|ref|YP_003736063.1| - 4.5e-39 133.5 0.5 5.1e-39 133.4 0.5 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit MASE1 PF05231.14 gi|300710249|ref|YP_003736063.1| - 0.051 12.7 0.8 0.061 12.5 0.8 1.1 1 0 0 1 1 1 0 MASE1 DUF2527 PF10736.9 gi|300710249|ref|YP_003736063.1| - 0.2 11.5 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Proton_antipo_M PF00361.20 gi|300710250|ref|YP_003736064.1| - 6.2e-54 183.2 25.0 4.3e-53 180.4 25.0 2.3 1 1 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|300710250|ref|YP_003736064.1| - 1.2e-06 28.5 0.0 1.2e-06 28.5 0.0 2.6 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADHdeh_related PF10125.9 gi|300710250|ref|YP_003736064.1| - 0.00063 19.2 7.4 0.00063 19.2 7.4 2.6 1 1 0 2 2 2 2 NADH dehydrogenase I, subunit N related protein Oxidored_q2 PF00420.24 gi|300710251|ref|YP_003736065.1| - 1.3e-27 95.5 2.6 1.6e-27 95.1 2.6 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2868 PF11067.8 gi|300710251|ref|YP_003736065.1| - 0.083 12.4 0.8 0.1 12.1 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) CbtA PF09490.10 gi|300710251|ref|YP_003736065.1| - 0.14 11.9 6.7 0.3 10.8 6.9 1.5 1 1 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) Phage_holin_2_3 PF16080.5 gi|300710251|ref|YP_003736065.1| - 1.4 8.7 4.4 6.2 6.7 0.1 2.5 3 0 0 3 3 3 0 Bacteriophage holin family HP1 Trp_oprn_chp PF09534.10 gi|300710251|ref|YP_003736065.1| - 2.5 7.9 6.8 3 7.6 6.8 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) MnhB PF04039.13 gi|300710252|ref|YP_003736066.1| - 9.8e-34 116.3 10.8 1.2e-33 116.1 10.8 1.1 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter IncD PF17628.2 gi|300710252|ref|YP_003736066.1| - 3.3 7.5 10.2 0.32 10.8 0.4 2.3 2 1 0 2 2 2 0 Inclusion membrane protein D Proton_antipo_M PF00361.20 gi|300710253|ref|YP_003736067.1| - 2.9e-69 233.5 17.2 2.9e-69 233.5 17.2 3.2 2 1 1 3 3 3 1 Proton-conducting membrane transporter DUF4040 PF13244.6 gi|300710253|ref|YP_003736067.1| - 3.6e-13 49.5 12.2 3.6e-13 49.5 12.2 5.4 6 0 0 6 6 6 1 Domain of unknown function (DUF4040) Proton_antipo_N PF00662.20 gi|300710253|ref|YP_003736067.1| - 1.1e-09 38.3 0.1 1.1e-09 38.3 0.1 3.6 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N6_N4_Mtase PF01555.18 gi|300710254|ref|YP_003736068.1| - 3.5e-32 112.0 0.0 4.7e-32 111.5 0.0 1.1 1 0 0 1 1 1 1 DNA methylase UPF0020 PF01170.18 gi|300710254|ref|YP_003736068.1| - 0.0012 18.6 0.0 0.42 10.3 0.0 2.6 3 0 0 3 3 3 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|300710254|ref|YP_003736068.1| - 0.0031 18.1 0.1 0.28 11.9 0.0 2.9 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300710254|ref|YP_003736068.1| - 0.016 15.9 0.0 1.4 9.6 0.0 2.7 3 0 0 3 3 3 0 Methyltransferase domain TrkA_N PF02254.18 gi|300710255|ref|YP_003736069.1| - 2.6e-26 92.2 0.2 4.1e-26 91.5 0.2 1.3 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|300710255|ref|YP_003736069.1| - 4.2e-13 48.9 0.2 8.5e-13 47.9 0.2 1.6 1 0 0 1 1 1 1 TrkA-C domain UDPG_MGDP_dh_N PF03721.14 gi|300710255|ref|YP_003736069.1| - 4.1e-07 29.7 0.1 7.1e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IlvN PF07991.12 gi|300710255|ref|YP_003736069.1| - 0.00014 21.5 0.0 0.00053 19.6 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain FAD_binding_3 PF01494.19 gi|300710255|ref|YP_003736069.1| - 0.00031 20.1 0.0 0.00042 19.7 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain ApbA PF02558.16 gi|300710255|ref|YP_003736069.1| - 0.00039 20.1 0.0 0.0006 19.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|300710255|ref|YP_003736069.1| - 0.00076 19.8 0.1 0.0011 19.3 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|300710255|ref|YP_003736069.1| - 0.001 18.5 0.1 0.0019 17.6 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|300710255|ref|YP_003736069.1| - 0.0012 19.3 0.1 0.0019 18.6 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding NAD_binding_2 PF03446.15 gi|300710255|ref|YP_003736069.1| - 0.0021 18.2 0.2 0.0074 16.5 0.1 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|300710255|ref|YP_003736069.1| - 0.0024 17.8 0.1 0.0036 17.2 0.1 1.4 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|300710255|ref|YP_003736069.1| - 0.011 15.2 0.1 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family AlaDh_PNT_C PF01262.21 gi|300710255|ref|YP_003736069.1| - 0.017 14.4 0.2 0.026 13.8 0.2 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.6 gi|300710255|ref|YP_003736069.1| - 0.038 14.5 0.0 0.059 13.9 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain AdoHcyase_NAD PF00670.21 gi|300710255|ref|YP_003736069.1| - 0.039 14.0 0.1 0.056 13.5 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Pyr_redox PF00070.27 gi|300710255|ref|YP_003736069.1| - 0.042 14.4 0.2 0.18 12.4 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ADH_zinc_N PF00107.26 gi|300710255|ref|YP_003736069.1| - 0.063 13.3 0.4 0.29 11.1 0.1 2.0 1 1 1 2 2 2 0 Zinc-binding dehydrogenase NmrA PF05368.13 gi|300710255|ref|YP_003736069.1| - 0.072 12.6 0.1 0.16 11.5 0.1 1.6 1 1 1 2 2 2 0 NmrA-like family YliH PF10799.8 gi|300710255|ref|YP_003736069.1| - 0.1 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) Gp_dh_N PF00044.24 gi|300710255|ref|YP_003736069.1| - 0.11 12.8 0.2 0.23 11.8 0.2 1.5 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ribosomal_S4e PF00900.20 gi|300710255|ref|YP_003736069.1| - 0.13 12.2 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Ribosomal family S4e PIN_3 PF13470.6 gi|300710257|ref|YP_003736071.1| - 0.00031 21.5 4.2 0.0028 18.4 4.2 2.0 1 1 0 1 1 1 1 PIN domain PIN PF01850.21 gi|300710257|ref|YP_003736071.1| - 0.044 14.3 0.6 5.1 7.6 0.1 2.2 1 1 1 2 2 2 0 PIN domain Ham1p_like PF01725.16 gi|300710259|ref|YP_003736073.1| - 1.9e-53 181.2 0.0 2.2e-53 181.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family RQC PF09382.10 gi|300710260|ref|YP_003736074.1| - 0.12 12.1 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 RQC domain Peptidase_M22 PF00814.25 gi|300710261|ref|YP_003736075.1| - 5e-79 265.8 0.0 6.9e-79 265.3 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family APH PF01636.23 gi|300710261|ref|YP_003736075.1| - 4e-07 30.2 8.2 0.0001 22.3 8.1 2.9 1 1 0 1 1 1 1 Phosphotransferase enzyme family Ribosomal_S27 PF01599.19 gi|300710262|ref|YP_003736076.1| - 3.5e-07 30.3 2.9 3.5e-07 30.3 2.9 1.4 2 0 0 2 2 2 1 Ribosomal protein S27a Nudix_N_2 PF14803.6 gi|300710262|ref|YP_003736076.1| - 1.2 9.2 8.7 7 6.7 1.3 2.1 1 1 1 2 2 2 0 Nudix N-terminal Ribosomal_S24e PF01282.19 gi|300710263|ref|YP_003736077.1| - 4.9e-24 84.1 0.1 6e-24 83.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Rad51 PF08423.11 gi|300710264|ref|YP_003736078.1| - 8.6e-26 90.7 0.0 1.1e-25 90.4 0.0 1.0 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 gi|300710264|ref|YP_003736078.1| - 3.9e-14 52.7 0.3 5.5e-14 52.2 0.3 1.1 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 gi|300710264|ref|YP_003736078.1| - 7.2e-11 42.1 0.0 9.7e-11 41.6 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|300710264|ref|YP_003736078.1| - 8.8e-10 38.3 0.0 2.2e-09 37.0 0.0 1.6 1 1 0 1 1 1 1 KaiC Zot PF05707.12 gi|300710264|ref|YP_003736078.1| - 8.9e-08 32.0 0.0 1e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_24 PF13479.6 gi|300710264|ref|YP_003736078.1| - 1.3e-06 28.3 0.0 5.6e-06 26.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|300710264|ref|YP_003736078.1| - 0.00018 20.9 0.0 0.0008 18.8 0.0 1.7 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|300710264|ref|YP_003736078.1| - 0.0023 18.3 0.2 0.0033 17.8 0.2 1.2 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|300710264|ref|YP_003736078.1| - 0.0029 17.3 0.0 0.0088 15.8 0.0 1.6 1 1 1 2 2 2 1 IstB-like ATP binding protein AAA PF00004.29 gi|300710264|ref|YP_003736078.1| - 0.018 15.5 0.0 0.03 14.8 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|300710264|ref|YP_003736078.1| - 0.1 12.5 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea CobA_CobO_BtuR PF02572.15 gi|300710264|ref|YP_003736078.1| - 0.11 12.7 0.1 0.25 11.6 0.1 1.6 1 1 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DUF460 PF04312.13 gi|300710265|ref|YP_003736079.1| - 0.064 13.0 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF460) OrfB_Zn_ribbon PF07282.11 gi|300710266|ref|YP_003736080.1| - 0.00011 22.0 0.5 0.00011 22.0 0.5 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.7 gi|300710266|ref|YP_003736080.1| - 0.001 19.0 1.1 0.0011 18.9 1.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|300710266|ref|YP_003736080.1| - 0.0069 16.1 2.3 2.1 8.2 0.4 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zf-RING_7 PF02591.15 gi|300710266|ref|YP_003736080.1| - 0.0096 16.1 1.3 2.4 8.4 0.1 2.1 2 0 0 2 2 2 2 C4-type zinc ribbon domain DUF1610 PF07754.11 gi|300710266|ref|YP_003736080.1| - 0.02 14.9 6.8 1.3 9.0 2.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) TackOD1 PF18551.1 gi|300710266|ref|YP_003736080.1| - 0.028 14.1 0.3 0.031 13.9 0.3 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DNA_ligase_ZBD PF03119.16 gi|300710266|ref|YP_003736080.1| - 0.048 13.7 3.0 0.56 10.3 0.1 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain HypA PF01155.19 gi|300710266|ref|YP_003736080.1| - 0.051 13.6 0.5 0.052 13.6 0.5 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|300710266|ref|YP_003736080.1| - 0.058 12.9 4.6 0.46 10.0 0.2 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Ribosomal_L37e PF01907.19 gi|300710266|ref|YP_003736080.1| - 0.088 13.0 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L37e zf-HYPF PF07503.12 gi|300710266|ref|YP_003736080.1| - 0.13 12.1 2.8 2.3 8.1 0.1 2.2 2 0 0 2 2 2 0 HypF finger zf-ribbon_3 PF13248.6 gi|300710266|ref|YP_003736080.1| - 0.13 11.7 8.3 0.96 9.0 1.0 2.3 2 1 0 2 2 2 0 zinc-ribbon domain Sgf11 PF08209.11 gi|300710266|ref|YP_003736080.1| - 0.16 11.5 1.4 5.1 6.7 0.1 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Zn-ribbon_8 PF09723.10 gi|300710266|ref|YP_003736080.1| - 0.16 12.1 6.8 0.33 11.1 0.8 2.1 1 1 1 2 2 2 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|300710266|ref|YP_003736080.1| - 0.23 11.1 1.7 1.4 8.6 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ISL3 PF14690.6 gi|300710266|ref|YP_003736080.1| - 0.33 11.7 4.3 1.3 9.8 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Ogr_Delta PF04606.12 gi|300710266|ref|YP_003736080.1| - 0.33 11.0 3.4 3.6 7.6 0.1 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-tcix PF14952.6 gi|300710266|ref|YP_003736080.1| - 0.36 10.5 4.5 1.6 8.4 0.1 2.2 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.7 gi|300710266|ref|YP_003736080.1| - 0.37 10.8 4.7 2.1 8.4 4.7 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-IS66 PF13005.7 gi|300710266|ref|YP_003736080.1| - 0.37 11.2 2.9 4.1 7.9 0.2 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DNA_RNApol_7kD PF03604.13 gi|300710266|ref|YP_003736080.1| - 0.4 10.4 2.7 3.6 7.3 3.0 2.0 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2 PF00096.26 gi|300710266|ref|YP_003736080.1| - 0.47 11.0 2.3 3 8.5 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type CpXC PF14353.6 gi|300710266|ref|YP_003736080.1| - 0.95 9.5 4.3 0.67 10.0 0.2 2.0 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_9 PF14369.6 gi|300710266|ref|YP_003736080.1| - 1.6 9.0 6.6 0.68 10.2 0.6 2.1 1 1 1 2 2 2 0 zinc-ribbon DUF3797 PF12677.7 gi|300710266|ref|YP_003736080.1| - 2.7 8.0 6.1 3.2 7.7 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-Mss51 PF13824.6 gi|300710266|ref|YP_003736080.1| - 3.2 7.9 6.0 96 3.2 6.0 2.1 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF111 PF01969.17 gi|300710267|ref|YP_003736081.1| - 2.3e-131 438.3 3.8 2.6e-131 438.2 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 TetR_C_18 PF17923.1 gi|300710267|ref|YP_003736081.1| - 0.055 14.0 0.8 0.15 12.6 0.8 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Lactonase PF10282.9 gi|300710267|ref|YP_003736081.1| - 0.065 12.5 0.1 0.093 12.0 0.1 1.2 1 0 0 1 1 1 0 Lactonase, 7-bladed beta-propeller AAA PF00004.29 gi|300710268|ref|YP_003736082.1| - 2.4e-100 332.2 0.0 9.4e-49 165.2 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|300710268|ref|YP_003736082.1| - 1.8e-30 104.9 0.0 1.5e-29 102.0 0.1 2.5 3 0 0 3 3 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|300710268|ref|YP_003736082.1| - 7.5e-30 102.5 3.7 2.2e-14 53.0 0.7 2.5 2 0 0 2 2 2 2 AAA+ lid domain CDC48_2 PF02933.17 gi|300710268|ref|YP_003736082.1| - 3.7e-16 58.7 0.1 2.3e-15 56.1 0.1 2.3 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|300710268|ref|YP_003736082.1| - 2.9e-15 56.4 0.1 8.9e-07 28.8 0.0 3.1 2 1 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|300710268|ref|YP_003736082.1| - 4.3e-15 56.5 0.4 7.2e-06 26.5 0.3 4.3 2 2 1 3 3 3 2 AAA ATPase domain AAA_5 PF07728.14 gi|300710268|ref|YP_003736082.1| - 6.1e-15 55.4 1.0 1.3e-06 28.4 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|300710268|ref|YP_003736082.1| - 2.8e-13 50.3 0.0 1.4e-05 25.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|300710268|ref|YP_003736082.1| - 1.8e-11 44.4 0.9 0.011 16.0 0.0 4.3 2 2 2 4 4 4 2 AAA domain TIP49 PF06068.13 gi|300710268|ref|YP_003736082.1| - 9.1e-11 41.5 0.0 0.00023 20.5 0.0 3.1 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|300710268|ref|YP_003736082.1| - 1.4e-10 41.5 0.0 7.5e-05 22.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|300710268|ref|YP_003736082.1| - 1.1e-07 31.7 0.0 0.017 14.9 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.6 gi|300710268|ref|YP_003736082.1| - 1.7e-07 31.4 0.0 0.0075 16.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|300710268|ref|YP_003736082.1| - 2.7e-07 31.2 0.0 0.044 14.3 0.0 3.0 2 2 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|300710268|ref|YP_003736082.1| - 6.7e-07 29.7 0.0 0.061 13.7 0.0 2.5 2 0 0 2 2 2 2 RNA helicase Sigma54_activat PF00158.26 gi|300710268|ref|YP_003736082.1| - 9.3e-07 28.7 0.2 0.081 12.6 0.0 3.5 3 1 0 3 3 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|300710268|ref|YP_003736082.1| - 1.2e-06 28.0 0.2 0.06 12.7 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|300710268|ref|YP_003736082.1| - 3.1e-06 27.1 0.0 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|300710268|ref|YP_003736082.1| - 4.8e-06 26.2 0.0 0.12 11.9 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region ATPase PF06745.13 gi|300710268|ref|YP_003736082.1| - 7.4e-06 25.5 0.1 0.37 10.1 0.0 3.4 3 0 0 3 3 3 2 KaiC AAA_28 PF13521.6 gi|300710268|ref|YP_003736082.1| - 1.1e-05 25.7 0.0 0.034 14.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|300710268|ref|YP_003736082.1| - 1.2e-05 25.3 0.0 1 9.2 0.0 3.9 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea DUF815 PF05673.13 gi|300710268|ref|YP_003736082.1| - 1.3e-05 24.5 0.0 0.19 10.8 0.0 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|300710268|ref|YP_003736082.1| - 1.6e-05 24.6 3.8 2.3 7.7 0.1 4.3 3 1 0 4 4 4 1 AAA domain AAA_24 PF13479.6 gi|300710268|ref|YP_003736082.1| - 2.8e-05 23.9 0.0 0.13 12.0 0.0 2.8 3 0 0 3 3 2 2 AAA domain TsaE PF02367.17 gi|300710268|ref|YP_003736082.1| - 4e-05 23.6 0.0 0.17 11.9 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|300710268|ref|YP_003736082.1| - 5.9e-05 23.6 0.0 0.51 10.8 0.0 2.5 2 0 0 2 2 2 2 ABC transporter PhoH PF02562.16 gi|300710268|ref|YP_003736082.1| - 7e-05 22.4 0.3 0.43 10.0 0.0 3.0 3 0 0 3 3 2 2 PhoH-like protein AAA_30 PF13604.6 gi|300710268|ref|YP_003736082.1| - 9.1e-05 22.2 0.1 0.51 10.0 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_11 PF13086.6 gi|300710268|ref|YP_003736082.1| - 9.9e-05 22.2 0.0 0.3 10.8 0.0 2.2 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|300710268|ref|YP_003736082.1| - 0.00012 21.4 0.0 0.12 11.5 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain AAA_17 PF13207.6 gi|300710268|ref|YP_003736082.1| - 0.00036 21.0 0.1 0.99 9.8 0.0 3.6 3 1 0 3 3 2 1 AAA domain Zeta_toxin PF06414.12 gi|300710268|ref|YP_003736082.1| - 0.00037 19.8 0.3 0.61 9.3 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin NACHT PF05729.12 gi|300710268|ref|YP_003736082.1| - 0.0004 20.3 0.3 0.57 10.1 0.0 3.2 4 0 0 4 4 3 1 NACHT domain Parvo_NS1 PF01057.17 gi|300710268|ref|YP_003736082.1| - 0.00044 19.4 0.2 0.52 9.4 0.1 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|300710268|ref|YP_003736082.1| - 0.00056 19.3 0.0 0.4 9.9 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|300710268|ref|YP_003736082.1| - 0.00058 20.0 0.0 1.4 9.0 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain IPT PF01745.16 gi|300710268|ref|YP_003736082.1| - 0.0013 18.2 0.6 0.52 9.7 0.0 2.8 3 0 0 3 3 3 1 Isopentenyl transferase KAP_NTPase PF07693.14 gi|300710268|ref|YP_003736082.1| - 0.0026 17.0 0.1 1.8 7.8 0.0 3.3 2 2 0 3 3 3 1 KAP family P-loop domain AAA_19 PF13245.6 gi|300710268|ref|YP_003736082.1| - 0.0034 17.7 1.0 4.6 7.6 0.0 2.9 2 1 1 3 3 2 0 AAA domain Cytidylate_kin PF02224.18 gi|300710268|ref|YP_003736082.1| - 0.0063 16.3 0.1 4.4 7.0 0.0 2.6 2 0 0 2 2 2 0 Cytidylate kinase Bac_DnaA PF00308.18 gi|300710268|ref|YP_003736082.1| - 0.0065 16.3 0.0 4.1 7.2 0.0 2.6 2 0 0 2 2 2 0 Bacterial dnaA protein Vps4_C PF09336.10 gi|300710268|ref|YP_003736082.1| - 0.008 16.1 0.2 0.32 11.0 0.0 3.0 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain NTPase_1 PF03266.15 gi|300710268|ref|YP_003736082.1| - 0.0082 16.1 1.6 2.9 7.8 0.1 3.2 3 1 0 3 3 2 1 NTPase Hydin_ADK PF17213.3 gi|300710268|ref|YP_003736082.1| - 0.03 14.6 0.0 4.2 7.6 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Viral_helicase1 PF01443.18 gi|300710268|ref|YP_003736082.1| - 0.032 14.0 0.0 2.4 7.8 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase CPT PF07931.12 gi|300710268|ref|YP_003736082.1| - 0.04 13.8 0.0 3.8 7.3 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein ResIII PF04851.15 gi|300710268|ref|YP_003736082.1| - 0.042 13.9 0.0 9 6.3 0.0 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 gi|300710268|ref|YP_003736082.1| - 0.047 13.6 0.0 9 6.2 0.0 2.6 2 1 0 2 2 2 0 Rad17 P-loop domain Zot PF05707.12 gi|300710268|ref|YP_003736082.1| - 0.05 13.2 0.0 6.2 6.4 0.0 2.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) SKI PF01202.22 gi|300710268|ref|YP_003736082.1| - 0.054 13.6 0.0 11 6.1 0.0 2.4 2 0 0 2 2 2 0 Shikimate kinase Torsin PF06309.11 gi|300710268|ref|YP_003736082.1| - 0.064 13.3 0.0 4.6 7.4 0.0 2.3 2 0 0 2 2 2 0 Torsin AFG1_ATPase PF03969.16 gi|300710268|ref|YP_003736082.1| - 0.1 11.5 0.0 1.7 7.5 0.0 2.1 2 0 0 2 2 2 0 AFG1-like ATPase Cytidylate_kin2 PF13189.6 gi|300710268|ref|YP_003736082.1| - 0.16 12.1 0.0 7 6.7 0.0 2.3 2 0 0 2 2 2 0 Cytidylate kinase-like family Guanylate_kin PF00625.21 gi|300710268|ref|YP_003736082.1| - 0.18 11.5 0.3 63 3.2 0.0 3.4 3 1 1 4 4 3 0 Guanylate kinase ATPase PF06745.13 gi|300710269|ref|YP_003736083.1| - 3.8e-76 255.5 0.0 9.5e-42 142.9 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_25 PF13481.6 gi|300710269|ref|YP_003736083.1| - 8.6e-18 64.6 0.0 3e-08 33.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain DnaB_C PF03796.15 gi|300710269|ref|YP_003736083.1| - 1.6e-09 37.5 0.0 1.5e-05 24.5 0.0 2.6 2 1 1 3 3 3 2 DnaB-like helicase C terminal domain Rad51 PF08423.11 gi|300710269|ref|YP_003736083.1| - 1.3e-07 31.2 1.3 0.0029 16.9 0.6 2.8 2 1 0 2 2 2 2 Rad51 AAA_22 PF13401.6 gi|300710269|ref|YP_003736083.1| - 2.4e-07 31.1 0.0 0.00066 20.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain RecA PF00154.21 gi|300710269|ref|YP_003736083.1| - 3.1e-06 26.9 0.1 0.057 12.9 0.1 2.3 2 0 0 2 2 2 2 recA bacterial DNA recombination protein IstB_IS21 PF01695.17 gi|300710269|ref|YP_003736083.1| - 5.7e-06 26.2 0.0 0.13 12.0 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein DUF2075 PF09848.9 gi|300710269|ref|YP_003736083.1| - 6.3e-06 25.7 0.0 0.0023 17.2 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) GvpD PF07088.11 gi|300710269|ref|YP_003736083.1| - 8e-06 24.7 0.4 0.00016 20.5 0.0 2.4 2 1 0 2 2 2 1 GvpD gas vesicle protein MEDS PF14417.6 gi|300710269|ref|YP_003736083.1| - 8.4e-06 25.7 0.0 0.052 13.4 0.0 2.4 2 0 0 2 2 2 2 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_24 PF13479.6 gi|300710269|ref|YP_003736083.1| - 1e-05 25.3 0.0 0.1 12.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|300710269|ref|YP_003736083.1| - 1.2e-05 25.7 0.0 0.04 14.3 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_14 PF13173.6 gi|300710269|ref|YP_003736083.1| - 0.00069 19.7 0.0 0.044 13.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 gi|300710269|ref|YP_003736083.1| - 0.00074 18.5 0.3 0.0035 16.3 0.3 2.1 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain T2SSE PF00437.20 gi|300710269|ref|YP_003736083.1| - 0.0012 18.0 0.0 0.0029 16.7 0.0 1.6 2 0 0 2 2 2 1 Type II/IV secretion system protein DAP3 PF10236.9 gi|300710269|ref|YP_003736083.1| - 0.0019 17.4 0.0 1.2 8.2 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial ribosomal death-associated protein 3 AAA_7 PF12775.7 gi|300710269|ref|YP_003736083.1| - 0.0021 17.6 0.0 0.32 10.5 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 gi|300710269|ref|YP_003736083.1| - 0.0022 17.7 0.0 1.7 8.3 0.6 2.3 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|300710269|ref|YP_003736083.1| - 0.0029 18.2 0.0 0.15 12.6 0.0 2.9 3 0 0 3 3 3 1 AAA domain ResIII PF04851.15 gi|300710269|ref|YP_003736083.1| - 0.006 16.6 0.0 0.12 12.3 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ATPase_2 PF01637.18 gi|300710269|ref|YP_003736083.1| - 0.0065 16.4 0.0 1 9.2 0.0 2.3 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA PF00004.29 gi|300710269|ref|YP_003736083.1| - 0.0069 16.8 0.3 0.91 10.0 0.3 3.0 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|300710269|ref|YP_003736083.1| - 0.01 16.3 0.1 1.2 9.6 0.4 2.6 3 0 0 3 3 2 0 ABC transporter AAA_19 PF13245.6 gi|300710269|ref|YP_003736083.1| - 0.015 15.7 0.2 6.8 7.0 1.8 2.5 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|300710269|ref|YP_003736083.1| - 0.015 15.2 0.0 3.6 7.5 0.0 2.3 2 0 0 2 2 2 0 NACHT domain AAA_11 PF13086.6 gi|300710269|ref|YP_003736083.1| - 0.025 14.4 0.0 0.77 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|300710269|ref|YP_003736083.1| - 0.029 14.8 0.0 2.9 8.3 0.0 2.6 2 0 0 2 2 2 0 RNA helicase AAA_10 PF12846.7 gi|300710269|ref|YP_003736083.1| - 0.035 13.0 0.0 0.44 9.4 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain CbiA PF01656.23 gi|300710269|ref|YP_003736083.1| - 0.045 13.8 0.0 0.42 10.7 0.0 2.2 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PAXNEB PF05625.11 gi|300710269|ref|YP_003736083.1| - 0.048 12.8 0.1 2.5 7.2 0.0 2.3 2 0 0 2 2 2 0 PAXNEB protein AAA_29 PF13555.6 gi|300710269|ref|YP_003736083.1| - 0.05 13.3 3.0 1 9.1 1.6 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain CobA_CobO_BtuR PF02572.15 gi|300710269|ref|YP_003736083.1| - 0.062 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AAA_5 PF07728.14 gi|300710269|ref|YP_003736083.1| - 0.12 12.3 0.1 23 5.0 0.0 3.0 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|300710269|ref|YP_003736083.1| - 0.13 12.1 6.4 4.1 7.3 2.1 3.2 2 2 0 3 3 3 0 NTPase AAA_23 PF13476.6 gi|300710269|ref|YP_003736083.1| - 2.2 8.7 3.6 5.1 7.5 3.6 1.5 1 0 0 1 1 1 0 AAA domain BAT PF15915.5 gi|300710270|ref|YP_003736084.1| - 1.1e-38 132.5 4.7 2.4e-38 131.5 4.7 1.6 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_10 PF04967.12 gi|300710270|ref|YP_003736084.1| - 4.2e-19 68.1 0.0 9.9e-19 66.9 0.0 1.7 1 0 0 1 1 1 1 HTH DNA binding domain GAF_2 PF13185.6 gi|300710270|ref|YP_003736084.1| - 8.8e-19 68.2 0.2 2.2e-18 66.9 0.2 1.7 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|300710270|ref|YP_003736084.1| - 7.6e-10 39.2 0.0 1.9e-09 38.0 0.0 1.8 1 0 0 1 1 1 1 GAF domain Sigma70_r4 PF04545.16 gi|300710270|ref|YP_003736084.1| - 3.2e-06 26.6 0.1 1.1e-05 24.8 0.1 2.0 1 0 0 1 1 1 1 Sigma-70, region 4 GAF PF01590.26 gi|300710270|ref|YP_003736084.1| - 1e-05 26.2 0.0 3.7e-05 24.4 0.0 2.0 2 0 0 2 2 2 1 GAF domain TrbI_Ftype PF09677.10 gi|300710270|ref|YP_003736084.1| - 0.00011 22.4 0.1 0.00038 20.7 0.1 1.9 1 0 0 1 1 1 1 Type-F conjugative transfer system protein (TrbI_Ftype) Sigma70_r4_2 PF08281.12 gi|300710270|ref|YP_003736084.1| - 0.00021 20.9 0.1 0.0023 17.6 0.1 2.4 1 1 0 1 1 1 1 Sigma-70, region 4 LexA_DNA_bind PF01726.16 gi|300710270|ref|YP_003736084.1| - 0.0071 16.1 0.3 0.072 12.9 0.3 2.4 1 1 0 1 1 1 1 LexA DNA binding domain Sigma70_r3 PF04539.16 gi|300710270|ref|YP_003736084.1| - 0.01 15.9 0.4 0.61 10.2 0.0 2.9 3 0 0 3 3 3 0 Sigma-70 region 3 HTH_24 PF13412.6 gi|300710270|ref|YP_003736084.1| - 0.028 14.0 0.0 0.081 12.5 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300710270|ref|YP_003736084.1| - 0.028 14.3 0.1 0.073 12.9 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710270|ref|YP_003736084.1| - 0.052 13.6 0.1 0.27 11.3 0.0 2.2 2 0 0 2 2 1 0 Helix-turn-helix domain GerE PF00196.19 gi|300710270|ref|YP_003736084.1| - 0.052 13.1 0.1 0.48 10.0 0.1 2.2 1 1 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_1 PF00126.27 gi|300710270|ref|YP_003736084.1| - 0.063 13.2 0.0 0.27 11.2 0.0 2.1 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Herpes_TK PF00693.18 gi|300710270|ref|YP_003736084.1| - 0.11 11.7 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus HTH_11 PF08279.12 gi|300710270|ref|YP_003736084.1| - 0.14 12.1 0.0 0.45 10.5 0.0 1.9 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.7 gi|300710271|ref|YP_003736085.1| - 0.0047 17.0 1.4 0.021 14.9 1.4 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|300710271|ref|YP_003736085.1| - 0.15 11.9 0.1 5.9 6.9 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Thiamine_BP PF01910.17 gi|300710272|ref|YP_003736086.1| - 1.5e-21 76.1 0.2 1.7e-21 75.9 0.2 1.0 1 0 0 1 1 1 1 Thiamine-binding protein OB_RNB PF08206.11 gi|300710272|ref|YP_003736086.1| - 0.063 13.0 0.1 0.091 12.5 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease B OB domain MCH PF02289.16 gi|300710273|ref|YP_003736087.1| - 4e-116 387.7 0.7 4.4e-116 387.5 0.7 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) GTP_EFTU PF00009.27 gi|300710275|ref|YP_003736089.1| - 2.9e-34 118.3 0.0 4.2e-34 117.8 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|300710275|ref|YP_003736089.1| - 1.6e-10 41.2 0.7 5.8e-10 39.4 0.7 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 gi|300710275|ref|YP_003736089.1| - 1.2e-07 32.0 0.0 4.7e-07 30.1 0.0 2.0 1 1 0 1 1 1 1 Elongation factor Tu C-terminal domain RsgA_GTPase PF03193.16 gi|300710275|ref|YP_003736089.1| - 0.043 13.7 0.0 0.98 9.3 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase ATP_bind_1 PF03029.17 gi|300710275|ref|YP_003736089.1| - 0.072 12.9 0.0 0.67 9.7 0.0 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Polysacc_deac_1 PF01522.21 gi|300710275|ref|YP_003736089.1| - 0.14 12.1 0.0 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 Polysaccharide deacetylase DnaJ PF00226.31 gi|300710276|ref|YP_003736090.1| - 4.9e-11 42.6 0.0 6.7e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Phage_holin_3_6 PF07332.11 gi|300710276|ref|YP_003736090.1| - 0.057 13.5 0.2 0.078 13.0 0.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4781 PF16013.5 gi|300710276|ref|YP_003736090.1| - 0.51 9.1 1.3 0.69 8.7 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) MFS_1 PF07690.16 gi|300710277|ref|YP_003736091.1| - 5.8e-52 176.8 51.1 4.6e-26 91.6 20.5 2.0 1 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|300710277|ref|YP_003736091.1| - 1.4e-11 43.9 26.2 5.9e-06 25.4 11.3 3.1 2 1 1 3 3 3 3 Sugar (and other) transporter MFS_1_like PF12832.7 gi|300710277|ref|YP_003736091.1| - 2e-07 30.2 19.7 4e-06 25.9 5.6 3.1 1 1 2 3 3 3 2 MFS_1 like family MFS_4 PF06779.14 gi|300710277|ref|YP_003736091.1| - 9.3e-06 25.2 23.5 9.3e-06 25.2 23.5 1.8 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB PseudoU_synth_1 PF01416.20 gi|300710278|ref|YP_003736092.1| - 1.5e-21 76.9 0.0 6.7e-16 58.7 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase Peptidase_M28 PF04389.17 gi|300710279|ref|YP_003736093.1| - 1.8e-29 102.9 0.0 2.4e-29 102.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 PA PF02225.22 gi|300710279|ref|YP_003736093.1| - 1.4e-12 47.4 0.5 2.8e-12 46.5 0.5 1.5 1 0 0 1 1 1 1 PA domain Peptidase_M42 PF05343.14 gi|300710279|ref|YP_003736093.1| - 1.1e-06 27.9 0.1 1.8e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|300710279|ref|YP_003736093.1| - 0.0019 18.0 0.0 0.0033 17.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 FumaraseC_C PF10415.9 gi|300710279|ref|YP_003736093.1| - 0.038 14.4 0.0 0.15 12.5 0.0 2.0 1 0 0 1 1 1 0 Fumarase C C-terminus Peptidase_M3 PF01432.20 gi|300710280|ref|YP_003736094.1| - 5.7e-70 236.8 1.1 5.7e-70 236.8 1.1 2.0 2 0 0 2 2 2 1 Peptidase family M3 Peptidase_M3_N PF08439.10 gi|300710280|ref|YP_003736094.1| - 6.6e-24 84.0 1.1 6.6e-24 84.0 1.1 3.1 4 0 0 4 4 4 1 Oligopeptidase F DegS PF05384.11 gi|300710280|ref|YP_003736094.1| - 0.044 13.3 0.4 0.11 12.0 0.4 1.7 1 0 0 1 1 1 0 Sensor protein DegS PIN_3 PF13470.6 gi|300710280|ref|YP_003736094.1| - 4.7 8.0 6.2 4.9 8.0 0.1 3.5 3 1 0 3 3 3 0 PIN domain AAA PF00004.29 gi|300710281|ref|YP_003736095.1| - 1.4e-44 151.7 0.1 2.7e-44 150.8 0.1 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|300710281|ref|YP_003736095.1| - 2.2e-16 59.4 0.6 7.3e-16 57.7 0.6 2.0 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|300710281|ref|YP_003736095.1| - 7.2e-09 36.0 0.0 1.7e-08 34.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|300710281|ref|YP_003736095.1| - 1.7e-07 31.1 0.2 2e-06 27.7 0.0 2.6 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain Prot_ATP_ID_OB PF16450.5 gi|300710281|ref|YP_003736095.1| - 8.7e-07 28.8 0.3 3.2e-06 27.0 0.1 2.1 3 0 0 3 3 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 gi|300710281|ref|YP_003736095.1| - 4.3e-06 26.8 0.2 1.8e-05 24.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|300710281|ref|YP_003736095.1| - 2.2e-05 24.9 5.4 0.00034 21.0 0.1 3.3 3 1 1 4 4 4 1 AAA ATPase domain AAA_22 PF13401.6 gi|300710281|ref|YP_003736095.1| - 3.1e-05 24.3 1.8 0.00052 20.3 0.4 2.8 2 1 0 2 2 2 1 AAA domain ZapB PF06005.12 gi|300710281|ref|YP_003736095.1| - 0.00017 21.9 1.0 0.00073 19.9 0.7 2.2 2 0 0 2 2 1 1 Cell division protein ZapB DUF815 PF05673.13 gi|300710281|ref|YP_003736095.1| - 0.00025 20.3 0.0 0.00048 19.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|300710281|ref|YP_003736095.1| - 0.00031 20.9 0.1 0.0015 18.7 0.1 2.4 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|300710281|ref|YP_003736095.1| - 0.00057 19.2 0.0 0.0011 18.3 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_18 PF13238.6 gi|300710281|ref|YP_003736095.1| - 0.0012 19.4 0.0 0.0042 17.6 0.0 2.1 1 1 1 2 2 1 1 AAA domain AAA_14 PF13173.6 gi|300710281|ref|YP_003736095.1| - 0.0013 18.8 0.0 0.0031 17.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|300710281|ref|YP_003736095.1| - 0.0032 16.9 0.1 0.0065 15.9 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|300710281|ref|YP_003736095.1| - 0.0072 16.0 0.2 0.08 12.7 0.0 2.4 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_17 PF13207.6 gi|300710281|ref|YP_003736095.1| - 0.01 16.2 0.3 0.055 13.9 0.0 2.4 2 1 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|300710281|ref|YP_003736095.1| - 0.01 15.5 0.0 0.024 14.4 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 gi|300710281|ref|YP_003736095.1| - 0.011 15.7 0.2 0.049 13.6 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_28 PF13521.6 gi|300710281|ref|YP_003736095.1| - 0.011 15.9 6.2 0.023 14.9 0.5 3.3 2 1 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|300710281|ref|YP_003736095.1| - 0.014 15.4 0.0 0.031 14.3 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_3 PF07726.11 gi|300710281|ref|YP_003736095.1| - 0.015 15.2 0.0 0.043 13.7 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|300710281|ref|YP_003736095.1| - 0.025 13.8 0.0 0.047 12.9 0.0 1.6 1 1 0 1 1 1 0 NB-ARC domain AAA_11 PF13086.6 gi|300710281|ref|YP_003736095.1| - 0.027 14.3 0.1 0.075 12.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain CPT PF07931.12 gi|300710281|ref|YP_003736095.1| - 0.03 14.1 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_24 PF13479.6 gi|300710281|ref|YP_003736095.1| - 0.031 14.0 0.4 0.18 11.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|300710281|ref|YP_003736095.1| - 0.031 13.8 0.0 0.06 12.9 0.0 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region DUF4438 PF14505.6 gi|300710281|ref|YP_003736095.1| - 0.036 13.0 0.0 0.057 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4438) ATPase PF06745.13 gi|300710281|ref|YP_003736095.1| - 0.037 13.4 1.5 0.7 9.2 0.7 2.7 2 1 0 2 2 2 0 KaiC NTPase_1 PF03266.15 gi|300710281|ref|YP_003736095.1| - 0.037 13.9 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 1 0 NTPase Torsin PF06309.11 gi|300710281|ref|YP_003736095.1| - 0.037 14.1 0.0 0.078 13.1 0.0 1.4 1 0 0 1 1 1 0 Torsin RNA_helicase PF00910.22 gi|300710281|ref|YP_003736095.1| - 0.041 14.3 0.0 0.074 13.5 0.0 1.5 1 0 0 1 1 1 0 RNA helicase DUF1492 PF07374.11 gi|300710281|ref|YP_003736095.1| - 0.043 14.0 0.1 0.11 12.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) TniB PF05621.11 gi|300710281|ref|YP_003736095.1| - 0.084 12.3 0.0 4 6.8 0.0 2.5 1 1 0 2 2 2 0 Bacterial TniB protein AAA_25 PF13481.6 gi|300710281|ref|YP_003736095.1| - 0.12 11.9 6.8 0.39 10.3 0.1 3.3 2 1 1 3 3 3 0 AAA domain Parvo_NS1 PF01057.17 gi|300710281|ref|YP_003736095.1| - 0.14 11.2 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 ABC_tran PF00005.27 gi|300710281|ref|YP_003736095.1| - 0.15 12.6 0.0 0.43 11.1 0.0 1.9 1 0 0 1 1 1 0 ABC transporter Prot_ATP_OB_N PF17758.1 gi|300710281|ref|YP_003736095.1| - 0.26 11.0 2.9 0.36 10.5 0.2 2.6 2 1 1 3 3 3 0 Proteasomal ATPase OB N-terminal domain TSC22 PF01166.18 gi|300710281|ref|YP_003736095.1| - 0.33 11.3 3.3 3.6 8.0 0.1 3.4 2 1 0 3 3 3 0 TSC-22/dip/bun family PvlArgDC PF01862.16 gi|300710282|ref|YP_003736096.1| - 7e-29 100.7 0.0 7.8e-29 100.6 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) TAT_signal PF10518.9 gi|300710283|ref|YP_003736097.1| - 0.057 13.3 7.0 0.12 12.2 7.0 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence DUF5319 PF17252.2 gi|300710284|ref|YP_003736098.1| - 0.097 12.9 0.0 1.5 9.1 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5319) GTP_EFTU_D4 PF14578.6 gi|300710285|ref|YP_003736099.1| - 4.5e-24 84.2 0.4 1.2e-23 82.8 0.4 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 gi|300710285|ref|YP_003736099.1| - 8e-24 84.2 0.0 1.5e-23 83.3 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|300710285|ref|YP_003736099.1| - 5.9e-23 81.0 0.2 1.2e-22 80.0 0.2 1.5 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|300710285|ref|YP_003736099.1| - 9.5e-13 48.4 4.5 4.4e-09 36.6 0.0 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|300710285|ref|YP_003736099.1| - 0.012 15.7 0.0 0.03 14.4 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase Biotin_lipoyl PF00364.22 gi|300710285|ref|YP_003736099.1| - 0.62 9.9 3.6 4.1 7.3 0.2 2.9 3 0 0 3 3 3 0 Biotin-requiring enzyme PRC PF05239.16 gi|300710286|ref|YP_003736100.1| - 1e-09 38.3 0.1 1.3e-09 38.0 0.1 1.1 1 0 0 1 1 1 1 PRC-barrel domain PIN_6 PF17146.4 gi|300710287|ref|YP_003736101.1| - 6.6e-13 49.0 0.3 2.8e-12 47.0 0.1 1.8 2 0 0 2 2 2 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|300710287|ref|YP_003736101.1| - 0.00054 19.4 0.9 0.00097 18.6 0.7 1.5 1 1 1 2 2 2 1 PINc domain ribonuclease Zn-ribbon_8 PF09723.10 gi|300710287|ref|YP_003736101.1| - 0.0016 18.5 1.5 0.0034 17.5 1.5 1.6 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|300710287|ref|YP_003736101.1| - 0.0025 17.8 0.7 0.0042 17.1 0.7 1.4 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2710 PF10921.8 gi|300710287|ref|YP_003736101.1| - 0.0099 16.3 1.0 0.026 14.9 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2710) zinc-ribbons_6 PF07191.12 gi|300710287|ref|YP_003736101.1| - 0.013 15.5 0.6 0.021 14.8 0.6 1.3 1 0 0 1 1 1 0 zinc-ribbons DUF4411 PF14367.6 gi|300710287|ref|YP_003736101.1| - 0.018 15.0 0.1 0.48 10.3 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4411) C1_2 PF03107.16 gi|300710287|ref|YP_003736101.1| - 0.075 13.4 1.4 0.4 11.0 1.4 2.0 1 1 0 1 1 1 0 C1 domain Prok-RING_1 PF14446.6 gi|300710287|ref|YP_003736101.1| - 0.081 12.9 0.4 0.15 12.0 0.4 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DZR PF12773.7 gi|300710287|ref|YP_003736101.1| - 0.083 12.9 1.6 0.13 12.3 1.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon CpXC PF14353.6 gi|300710287|ref|YP_003736101.1| - 0.22 11.5 1.4 1.2 9.2 0.2 2.3 1 1 1 2 2 2 0 CpXC protein zf-C2H2 PF00096.26 gi|300710287|ref|YP_003736101.1| - 0.27 11.8 2.8 0.71 10.4 0.2 2.2 1 1 1 2 2 2 0 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 gi|300710287|ref|YP_003736101.1| - 1.9 8.5 5.6 0.89 9.5 1.5 2.1 2 0 0 2 2 2 0 zinc-finger of a C2HC-type IF2_N PF04760.15 gi|300710288|ref|YP_003736102.1| - 0.038 13.8 0.0 0.046 13.5 0.0 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region PGI PF00342.19 gi|300710289|ref|YP_003736103.1| - 3.1e-26 92.0 0.0 2e-21 76.2 0.0 2.1 2 0 0 2 2 2 2 Phosphoglucose isomerase DUF2157 PF09925.9 gi|300710290|ref|YP_003736104.1| - 0.0069 16.2 6.9 0.012 15.4 6.9 1.4 1 0 0 1 1 1 1 Predicted membrane protein (DUF2157) EI24 PF07264.11 gi|300710290|ref|YP_003736104.1| - 0.34 11.1 15.5 0.57 10.4 15.5 1.4 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Tetraspanin PF00335.20 gi|300710290|ref|YP_003736104.1| - 0.35 10.6 3.0 0.49 10.1 3.0 1.3 1 0 0 1 1 1 0 Tetraspanin family Chromate_transp PF02417.15 gi|300710290|ref|YP_003736104.1| - 1 9.5 11.4 2.2 8.4 11.7 1.5 1 1 0 1 1 1 0 Chromate transporter CbiD PF01888.17 gi|300710291|ref|YP_003736105.1| - 0.0083 15.5 0.1 0.0088 15.4 0.1 1.2 1 0 0 1 1 1 1 CbiD AdoMet_MTase PF07757.13 gi|300710292|ref|YP_003736106.1| - 0.15 12.4 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase SecD_SecF PF02355.16 gi|300710293|ref|YP_003736107.1| - 7.4e-29 100.5 16.7 1.2e-27 96.5 14.3 2.0 2 0 0 2 2 2 2 Protein export membrane protein Sec_GG PF07549.14 gi|300710293|ref|YP_003736107.1| - 6.9e-07 28.6 0.1 1.6e-06 27.4 0.1 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Patched PF02460.18 gi|300710293|ref|YP_003736107.1| - 0.049 11.7 12.7 0.067 11.3 12.7 1.1 1 0 0 1 1 1 0 Patched family EI24 PF07264.11 gi|300710293|ref|YP_003736107.1| - 0.099 12.9 11.9 0.37 11.0 11.9 1.8 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) SecD_SecF PF02355.16 gi|300710294|ref|YP_003736108.1| - 5.4e-12 45.5 3.3 1.1e-11 44.5 3.3 1.4 1 0 0 1 1 1 1 Protein export membrane protein Sterol-sensing PF12349.8 gi|300710294|ref|YP_003736108.1| - 0.0038 17.1 1.2 0.0065 16.3 1.2 1.3 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation MMPL PF03176.15 gi|300710294|ref|YP_003736108.1| - 0.0061 15.5 10.4 0.011 14.6 10.4 1.4 1 0 0 1 1 1 1 MMPL family RNase_HII PF01351.18 gi|300710295|ref|YP_003736109.1| - 9e-39 133.4 0.0 1e-38 133.2 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII THUMP PF02926.17 gi|300710296|ref|YP_003736110.1| - 2e-05 24.7 0.0 4.1e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 THUMP domain DnaJ_CXXCXGXG PF00684.19 gi|300710296|ref|YP_003736110.1| - 0.0004 20.7 1.7 0.0045 17.3 0.4 2.9 3 0 0 3 3 3 1 DnaJ central domain Anti-TRAP PF15777.5 gi|300710296|ref|YP_003736110.1| - 0.017 15.0 5.6 0.026 14.5 2.4 2.5 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein Methyltrn_RNA_2 PF04013.12 gi|300710297|ref|YP_003736111.1| - 6.8e-62 208.7 0.0 7.5e-62 208.5 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase zf-CHY PF05495.12 gi|300710299|ref|YP_003736113.1| - 3.1e-13 50.0 8.6 3.6e-13 49.8 8.2 1.3 1 1 0 1 1 1 1 CHY zinc finger zinc_ribbon_9 PF14369.6 gi|300710299|ref|YP_003736113.1| - 3.8 7.8 12.9 0.73 10.1 2.8 3.2 2 1 1 3 3 3 0 zinc-ribbon NUDIX PF00293.28 gi|300710300|ref|YP_003736114.1| - 4.4e-16 59.1 1.6 6.2e-16 58.6 1.6 1.2 1 0 0 1 1 1 1 NUDIX domain Methyltransf_25 PF13649.6 gi|300710301|ref|YP_003736115.1| - 5.6e-14 52.6 0.0 8.1e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300710301|ref|YP_003736115.1| - 4.1e-10 40.2 0.0 7.8e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300710301|ref|YP_003736115.1| - 1.5e-09 37.9 0.0 3e-09 36.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300710301|ref|YP_003736115.1| - 4.5e-07 29.5 0.0 5.8e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|300710301|ref|YP_003736115.1| - 8.1e-07 29.0 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|300710301|ref|YP_003736115.1| - 1.5e-06 27.7 0.0 2.7e-06 26.9 0.0 1.3 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|300710301|ref|YP_003736115.1| - 1.1e-05 26.0 0.0 1.9e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|300710301|ref|YP_003736115.1| - 5.6e-05 22.8 0.0 6.1e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|300710301|ref|YP_003736115.1| - 0.00029 20.4 0.0 0.0005 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|300710301|ref|YP_003736115.1| - 0.0055 16.5 0.0 0.0073 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TPMT PF05724.11 gi|300710301|ref|YP_003736115.1| - 0.011 15.5 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_20 PF12147.8 gi|300710301|ref|YP_003736115.1| - 0.15 11.2 0.1 0.3 10.2 0.1 1.4 1 1 0 1 1 1 0 Putative methyltransferase TGT PF01702.18 gi|300710302|ref|YP_003736116.1| - 2.7e-76 257.0 0.0 3.5e-76 256.6 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase CPBP PF02517.16 gi|300710303|ref|YP_003736117.1| - 1.6 9.1 6.0 3.6 8.0 6.0 1.7 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease DUF5591 PF17884.1 gi|300710304|ref|YP_003736118.1| - 4.9e-59 198.6 0.9 7.1e-59 198.1 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) TGT_C2 PF14810.6 gi|300710304|ref|YP_003736118.1| - 2.8e-22 78.6 0.0 6e-22 77.6 0.0 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|300710304|ref|YP_003736118.1| - 3.6e-11 42.9 0.3 7.1e-11 41.9 0.3 1.4 1 0 0 1 1 1 1 PUA domain TGT PF01702.18 gi|300710304|ref|YP_003736118.1| - 7.3e-11 41.8 0.0 1.9e-10 40.4 0.0 1.7 2 0 0 2 2 2 1 Queuine tRNA-ribosyltransferase DUF2267 PF10025.9 gi|300710304|ref|YP_003736118.1| - 0.0012 19.1 0.5 0.04 14.2 0.0 2.9 2 1 1 3 3 3 1 Uncharacterized conserved protein (DUF2267) DUF4279 PF14106.6 gi|300710305|ref|YP_003736119.1| - 0.053 13.7 0.0 0.07 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) DUF5518 PF17647.1 gi|300710306|ref|YP_003736120.1| - 0.028 14.6 20.4 0.13 12.4 20.8 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5518) ThiS PF02597.20 gi|300710307|ref|YP_003736121.1| - 3.6e-16 59.6 0.1 4.1e-16 59.4 0.1 1.0 1 0 0 1 1 1 1 ThiS family ERCC3_RAD25_C PF16203.5 gi|300710310|ref|YP_003736124.1| - 1.1e-25 90.3 0.0 1.7e-25 89.6 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 gi|300710310|ref|YP_003736124.1| - 5.7e-18 65.5 0.0 1.1e-17 64.5 0.0 1.5 2 0 0 2 2 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|300710310|ref|YP_003736124.1| - 3.7e-14 53.0 0.0 2.6e-13 50.3 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|300710310|ref|YP_003736124.1| - 1.2e-09 37.4 0.0 1.7e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain DEAD PF00270.29 gi|300710310|ref|YP_003736124.1| - 1.1e-06 28.5 0.0 2.3e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase HTH_20 PF12840.7 gi|300710310|ref|YP_003736124.1| - 2.9e-05 24.1 0.2 0.0001 22.3 0.2 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain AAA_30 PF13604.6 gi|300710310|ref|YP_003736124.1| - 0.0001 22.1 0.0 0.00025 20.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain Flavi_DEAD PF07652.14 gi|300710310|ref|YP_003736124.1| - 0.0024 17.9 0.0 0.0043 17.0 0.0 1.4 1 0 0 1 1 1 1 Flavivirus DEAD domain AAA_22 PF13401.6 gi|300710310|ref|YP_003736124.1| - 0.0025 18.1 1.8 0.07 13.4 0.4 3.3 2 1 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|300710310|ref|YP_003736124.1| - 0.0046 16.3 0.0 0.0078 15.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) TrmB PF01978.19 gi|300710310|ref|YP_003736124.1| - 0.018 14.9 0.0 0.059 13.3 0.0 1.9 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF4283 PF14111.6 gi|300710310|ref|YP_003736124.1| - 0.034 13.7 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) AAA_25 PF13481.6 gi|300710310|ref|YP_003736124.1| - 0.035 13.7 1.5 0.088 12.4 0.0 2.3 3 0 0 3 3 3 0 AAA domain HTH_AsnC-type PF13404.6 gi|300710310|ref|YP_003736124.1| - 0.036 13.9 0.5 1.4 8.8 0.1 2.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Ehbp PF10622.9 gi|300710310|ref|YP_003736124.1| - 0.042 13.9 0.0 3.2 7.8 0.0 3.0 2 0 0 2 2 2 0 Energy-converting hydrogenase B subunit P (EhbP) AAA_11 PF13086.6 gi|300710310|ref|YP_003736124.1| - 0.14 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|300710310|ref|YP_003736124.1| - 0.15 12.5 0.0 0.66 10.4 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Glyco_hydro_32N PF00251.20 gi|300710311|ref|YP_003736125.1| - 1.8e-74 251.1 0.0 2.2e-74 250.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 N-terminal domain Glyco_hydro_32C PF08244.12 gi|300710311|ref|YP_003736125.1| - 9.6e-26 90.7 0.0 1.3e-25 90.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 32 C terminal DUF4960 PF16324.5 gi|300710311|ref|YP_003736125.1| - 0.015 14.9 0.0 0.027 14.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4960) RHS PF03527.14 gi|300710311|ref|YP_003736125.1| - 0.099 12.4 2.5 1.8 8.4 0.1 3.4 3 0 0 3 3 3 0 RHS protein Glyco_hydro_68 PF02435.16 gi|300710312|ref|YP_003736126.1| - 4.9e-83 279.3 0.0 6e-81 272.5 0.0 2.2 1 1 0 1 1 1 1 Levansucrase/Invertase Glyco_hydro_43 PF04616.14 gi|300710312|ref|YP_003736126.1| - 1.7e-06 27.6 0.0 3.8e-06 26.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyl hydrolases family 43 AFOR_C PF01314.18 gi|300710314|ref|YP_003736128.1| - 7.9e-116 387.2 4.0 9.4e-116 386.9 4.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|300710314|ref|YP_003736128.1| - 5.5e-72 241.8 0.1 8e-72 241.3 0.1 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer2 PF00111.27 gi|300710316|ref|YP_003736130.1| - 8.4e-10 38.5 0.0 1.7e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MerR-DNA-bind PF09278.11 gi|300710317|ref|YP_003736131.1| - 0.075 13.6 0.5 0.075 13.6 0.5 2.2 2 1 0 2 2 2 0 MerR, DNA binding Toxin_trans PF07952.12 gi|300710317|ref|YP_003736131.1| - 0.12 11.4 0.1 0.14 11.2 0.1 1.2 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain XhlA PF10779.9 gi|300710317|ref|YP_003736131.1| - 0.55 10.5 5.3 1.2 9.4 1.5 2.7 2 1 0 2 2 2 0 Haemolysin XhlA ECM11 PF15463.6 gi|300710317|ref|YP_003736131.1| - 0.67 10.5 5.0 1.7 9.2 0.3 2.8 2 1 1 3 3 3 0 Extracellular mutant protein 11 HTH_5 PF01022.20 gi|300710318|ref|YP_003736132.1| - 6.4e-12 45.1 0.0 9.9e-12 44.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710318|ref|YP_003736132.1| - 4e-09 36.4 0.0 6.9e-09 35.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|300710318|ref|YP_003736132.1| - 0.00061 19.6 0.1 0.00097 19.0 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|300710318|ref|YP_003736132.1| - 0.0012 18.3 0.0 0.0038 16.8 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding DprA_WH PF17782.1 gi|300710318|ref|YP_003736132.1| - 0.0028 17.7 0.2 0.0064 16.6 0.0 1.7 2 1 1 3 3 3 1 DprA winged helix domain HxlR PF01638.17 gi|300710318|ref|YP_003736132.1| - 0.01 15.7 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix MarR PF01047.22 gi|300710318|ref|YP_003736132.1| - 0.011 15.7 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 gi|300710318|ref|YP_003736132.1| - 0.016 15.0 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|300710318|ref|YP_003736132.1| - 0.018 14.9 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 MarR family LexA_DNA_bind PF01726.16 gi|300710318|ref|YP_003736132.1| - 0.021 14.6 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain PadR PF03551.14 gi|300710318|ref|YP_003736132.1| - 0.029 14.3 0.5 0.095 12.7 0.5 1.8 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family PaaX PF07848.12 gi|300710318|ref|YP_003736132.1| - 0.056 13.7 0.3 0.08 13.2 0.3 1.2 1 0 0 1 1 1 0 PaaX-like protein Methyltransf_25 PF13649.6 gi|300710320|ref|YP_003736134.1| - 4.4e-17 62.6 0.0 6.9e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300710320|ref|YP_003736134.1| - 7e-16 58.7 0.0 1.3e-15 57.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300710320|ref|YP_003736134.1| - 2.2e-10 41.2 0.0 3.1e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300710320|ref|YP_003736134.1| - 2.1e-09 37.1 0.0 2.8e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|300710320|ref|YP_003736134.1| - 6.2e-09 35.8 0.0 9.3e-09 35.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300710320|ref|YP_003736134.1| - 6e-07 29.4 0.0 1e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|300710320|ref|YP_003736134.1| - 0.008 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_8 PF05148.15 gi|300710320|ref|YP_003736134.1| - 0.011 15.6 0.0 0.12 12.2 0.0 2.0 1 1 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_4 PF02390.17 gi|300710320|ref|YP_003736134.1| - 0.025 14.1 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase Rubredoxin_2 PF18073.1 gi|300710321|ref|YP_003736135.1| - 1.3e-05 24.8 2.4 1.8e-05 24.3 2.4 1.2 1 0 0 1 1 1 1 Rubredoxin metal binding domain HypA PF01155.19 gi|300710321|ref|YP_003736135.1| - 1.3e-05 25.1 0.6 1.4e-05 25.1 0.6 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|300710321|ref|YP_003736135.1| - 0.00033 20.7 5.5 0.00033 20.7 5.5 1.8 2 1 0 2 2 2 1 Zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|300710321|ref|YP_003736135.1| - 0.00046 20.1 0.9 0.00053 19.9 0.9 1.1 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 gi|300710321|ref|YP_003736135.1| - 0.0041 17.1 0.9 0.0048 16.9 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|300710321|ref|YP_003736135.1| - 0.0049 16.3 1.2 0.72 9.4 0.1 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_15 PF17032.5 gi|300710321|ref|YP_003736135.1| - 0.006 17.3 1.7 0.0067 17.1 1.7 1.1 1 0 0 1 1 1 1 zinc-ribbon family Ogr_Delta PF04606.12 gi|300710321|ref|YP_003736135.1| - 0.014 15.4 1.9 0.66 10.0 0.3 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger TFIIS_C PF01096.18 gi|300710321|ref|YP_003736135.1| - 0.031 14.1 1.0 5.5 6.9 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DNA_RNApol_7kD PF03604.13 gi|300710321|ref|YP_003736135.1| - 0.034 13.8 4.6 0.082 12.6 4.7 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Zn_Tnp_IS1 PF03811.13 gi|300710321|ref|YP_003736135.1| - 0.048 13.4 2.9 2.8 7.8 0.3 2.3 2 0 0 2 2 2 0 InsA N-terminal domain zf-C2H2_6 PF13912.6 gi|300710321|ref|YP_003736135.1| - 0.07 13.2 1.7 1.4 9.0 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger GFA PF04828.14 gi|300710321|ref|YP_003736135.1| - 0.074 13.4 2.7 0.8 10.1 0.4 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-HIT PF04438.16 gi|300710321|ref|YP_003736135.1| - 0.076 12.9 4.5 0.73 9.8 0.3 2.1 2 0 0 2 2 2 0 HIT zinc finger DUF3268 PF11672.8 gi|300710321|ref|YP_003736135.1| - 0.086 13.2 1.0 0.2 12.0 1.0 1.6 1 1 1 2 2 2 0 zinc-finger-containing domain zf-IS66 PF13005.7 gi|300710321|ref|YP_003736135.1| - 0.088 13.2 5.5 0.35 11.3 0.5 2.4 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DNA_ligase_ZBD PF03119.16 gi|300710321|ref|YP_003736135.1| - 0.096 12.7 5.4 1.5 8.9 0.8 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf_UBZ PF18439.1 gi|300710321|ref|YP_003736135.1| - 0.16 11.6 3.3 1.7 8.3 0.2 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Actin_micro PF17003.5 gi|300710321|ref|YP_003736135.1| - 0.18 11.0 0.2 0.21 10.8 0.2 1.1 1 0 0 1 1 1 0 Putative actin-like family zf-ribbon_3 PF13248.6 gi|300710321|ref|YP_003736135.1| - 0.22 11.0 4.0 0.22 11.0 1.0 1.9 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|300710321|ref|YP_003736135.1| - 0.37 10.7 4.4 11 6.0 4.4 2.2 1 1 0 1 1 1 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|300710321|ref|YP_003736135.1| - 0.54 10.2 6.0 0.35 10.8 0.4 2.1 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Zn_ribbon_SprT PF17283.2 gi|300710321|ref|YP_003736135.1| - 0.67 9.9 6.4 2.1 8.3 1.1 2.2 1 1 1 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2 PF00096.26 gi|300710321|ref|YP_003736135.1| - 0.92 10.1 3.2 9.5 6.9 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-Mss51 PF13824.6 gi|300710321|ref|YP_003736135.1| - 1 9.5 5.2 6.3 7.0 0.7 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CCHC_5 PF14787.6 gi|300710321|ref|YP_003736135.1| - 2.2 8.1 7.0 5.8 6.7 0.3 2.2 1 1 1 2 2 2 0 GAG-polyprotein viral zinc-finger PQQ_2 PF13360.6 gi|300710322|ref|YP_003736136.1| - 2.2e-20 73.2 4.4 4.6e-10 39.5 0.1 3.5 2 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|300710322|ref|YP_003736136.1| - 1.3e-17 62.7 11.8 0.00043 20.1 0.1 7.7 7 1 1 8 8 8 5 PQQ enzyme repeat PQQ_3 PF13570.6 gi|300710322|ref|YP_003736136.1| - 3e-06 27.5 24.0 0.0092 16.4 0.2 5.7 5 1 0 5 5 5 4 PQQ-like domain DUF2001 PF09393.10 gi|300710323|ref|YP_003736137.1| - 0.07 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Phage tail tube protein AAA PF00004.29 gi|300710324|ref|YP_003736138.1| - 3.8e-85 283.0 0.0 4.3e-47 159.9 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|300710324|ref|YP_003736138.1| - 9.4e-30 102.2 4.0 4.7e-16 58.3 0.3 3.6 3 0 0 3 3 3 2 AAA+ lid domain AAA_16 PF13191.6 gi|300710324|ref|YP_003736138.1| - 2.4e-14 54.1 3.9 1.2e-05 25.7 0.3 4.3 2 2 0 2 2 2 2 AAA ATPase domain CDC48_N PF02359.18 gi|300710324|ref|YP_003736138.1| - 4.9e-14 52.3 0.2 1.6e-13 50.6 0.2 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|300710324|ref|YP_003736138.1| - 1.3e-11 44.5 0.0 1.7e-05 24.7 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|300710324|ref|YP_003736138.1| - 4e-11 43.3 0.0 7.3e-05 22.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|300710324|ref|YP_003736138.1| - 5.6e-10 39.6 0.6 0.0013 19.0 0.0 3.6 2 2 1 3 3 3 2 AAA domain AAA_5 PF07728.14 gi|300710324|ref|YP_003736138.1| - 8.9e-09 35.5 0.8 0.022 14.7 0.0 4.4 3 1 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|300710324|ref|YP_003736138.1| - 1.7e-08 35.0 0.0 0.0064 17.0 0.0 2.7 2 1 0 2 2 2 2 AAA domain NACHT PF05729.12 gi|300710324|ref|YP_003736138.1| - 3e-07 30.5 0.8 0.51 10.2 0.0 4.0 3 1 1 4 4 4 2 NACHT domain DUF815 PF05673.13 gi|300710324|ref|YP_003736138.1| - 3.4e-07 29.7 0.0 0.0013 17.9 0.0 2.6 2 1 0 2 2 2 2 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 gi|300710324|ref|YP_003736138.1| - 3.5e-07 30.1 0.0 0.013 15.3 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|300710324|ref|YP_003736138.1| - 5.2e-07 29.9 0.0 0.014 15.6 0.0 2.7 3 0 0 3 3 2 2 AAA domain CDC48_2 PF02933.17 gi|300710324|ref|YP_003736138.1| - 1e-06 28.4 0.1 2.4e-06 27.2 0.1 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 TIP49 PF06068.13 gi|300710324|ref|YP_003736138.1| - 2.9e-06 26.7 0.0 0.021 14.0 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_14 PF13173.6 gi|300710324|ref|YP_003736138.1| - 3e-06 27.3 0.0 0.02 14.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|300710324|ref|YP_003736138.1| - 1.1e-05 25.8 0.0 0.065 13.6 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_7 PF12775.7 gi|300710324|ref|YP_003736138.1| - 1.3e-05 24.8 0.0 0.082 12.4 0.0 2.7 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_28 PF13521.6 gi|300710324|ref|YP_003736138.1| - 1.7e-05 25.1 0.2 0.2 11.9 0.0 3.2 2 1 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|300710324|ref|YP_003736138.1| - 1.8e-05 25.3 0.0 0.27 11.7 0.0 2.8 3 0 0 3 3 2 2 ABC transporter AAA_24 PF13479.6 gi|300710324|ref|YP_003736138.1| - 2.5e-05 24.1 0.1 0.1 12.3 0.1 2.8 2 1 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|300710324|ref|YP_003736138.1| - 3.2e-05 23.7 0.0 0.17 11.6 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|300710324|ref|YP_003736138.1| - 3.9e-05 23.1 0.2 0.038 13.4 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|300710324|ref|YP_003736138.1| - 4.6e-05 23.2 0.3 0.15 11.7 0.0 2.8 2 1 0 2 2 2 2 AAA domain TsaE PF02367.17 gi|300710324|ref|YP_003736138.1| - 8e-05 22.6 0.0 0.24 11.4 0.0 2.7 3 0 0 3 3 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|300710324|ref|YP_003736138.1| - 0.00014 21.4 0.1 0.34 10.3 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_25 PF13481.6 gi|300710324|ref|YP_003736138.1| - 0.00019 21.1 10.7 0.81 9.2 0.0 4.8 4 1 0 5 5 5 2 AAA domain AAA_19 PF13245.6 gi|300710324|ref|YP_003736138.1| - 0.00045 20.6 0.0 1.7 8.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 gi|300710324|ref|YP_003736138.1| - 0.00052 19.4 0.0 1.3 8.3 0.0 2.5 2 0 0 2 2 2 2 KaiC ATPase_2 PF01637.18 gi|300710324|ref|YP_003736138.1| - 0.00054 20.0 0.0 0.82 9.5 0.0 2.9 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea Parvo_NS1 PF01057.17 gi|300710324|ref|YP_003736138.1| - 0.001 18.2 0.0 0.31 10.1 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|300710324|ref|YP_003736138.1| - 0.0017 17.7 0.0 0.84 8.8 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Bac_DnaA PF00308.18 gi|300710324|ref|YP_003736138.1| - 0.0027 17.6 0.0 0.95 9.3 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_29 PF13555.6 gi|300710324|ref|YP_003736138.1| - 0.0096 15.7 0.0 5 6.9 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_3 PF07726.11 gi|300710324|ref|YP_003736138.1| - 0.01 15.7 0.0 0.34 10.8 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|300710324|ref|YP_003736138.1| - 0.011 16.2 0.0 1.7 9.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 gi|300710324|ref|YP_003736138.1| - 0.011 15.8 0.0 2.9 8.0 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain Molydop_binding PF01568.21 gi|300710324|ref|YP_003736138.1| - 0.015 15.3 1.9 0.016 15.2 0.3 1.9 2 0 0 2 2 1 0 Molydopterin dinucleotide binding domain NB-ARC PF00931.22 gi|300710324|ref|YP_003736138.1| - 0.02 14.1 0.0 0.81 8.8 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain Zeta_toxin PF06414.12 gi|300710324|ref|YP_003736138.1| - 0.033 13.5 0.0 1.1 8.5 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin T2SSE PF00437.20 gi|300710324|ref|YP_003736138.1| - 0.034 13.2 0.0 14 4.6 0.0 3.2 3 0 0 3 3 3 0 Type II/IV secretion system protein PduV-EutP PF10662.9 gi|300710324|ref|YP_003736138.1| - 0.069 12.9 0.0 6 6.6 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AFG1_ATPase PF03969.16 gi|300710324|ref|YP_003736138.1| - 0.071 12.0 0.2 18 4.1 0.1 3.2 3 0 0 3 3 3 0 AFG1-like ATPase AAA_11 PF13086.6 gi|300710324|ref|YP_003736138.1| - 0.088 12.6 0.0 1.6 8.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain MEDS PF14417.6 gi|300710324|ref|YP_003736138.1| - 0.093 12.6 0.2 9.5 6.0 0.0 2.8 3 0 0 3 3 2 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain NTPase_1 PF03266.15 gi|300710324|ref|YP_003736138.1| - 0.13 12.2 0.0 2.1 8.2 0.0 3.0 3 0 0 3 3 3 0 NTPase AAA_21 PF13304.6 gi|300710324|ref|YP_003736138.1| - 0.21 11.4 2.3 3.7 7.3 0.1 2.8 2 2 2 4 4 4 0 AAA domain, putative AbiEii toxin, Type IV TA system ThiS PF02597.20 gi|300710325|ref|YP_003736139.1| - 1.4e-09 38.4 0.0 1.6e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 ThiS family DUF348 PF03990.14 gi|300710325|ref|YP_003736139.1| - 0.00011 21.9 0.4 0.00025 20.7 0.0 1.8 2 0 0 2 2 2 1 G5-linked-Ubiquitin-like domain AFOR_C PF01314.18 gi|300710326|ref|YP_003736140.1| - 3.2e-74 250.2 0.3 5.2e-74 249.5 0.3 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|300710326|ref|YP_003736140.1| - 7.7e-53 179.3 0.0 1.6e-52 178.3 0.0 1.5 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Cupin_2 PF07883.11 gi|300710327|ref|YP_003736141.1| - 6.8e-18 64.1 0.4 9.4e-18 63.7 0.4 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|300710327|ref|YP_003736141.1| - 5.5e-05 23.1 0.1 7e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|300710327|ref|YP_003736141.1| - 0.0034 17.3 0.0 0.0043 16.9 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 gi|300710327|ref|YP_003736141.1| - 0.0081 15.8 0.0 0.01 15.4 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.12 gi|300710327|ref|YP_003736141.1| - 0.016 14.8 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) CDO_I PF05995.12 gi|300710327|ref|YP_003736141.1| - 0.2 11.0 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 Cysteine dioxygenase type I NMT1 PF09084.11 gi|300710328|ref|YP_003736142.1| - 7e-10 39.2 0.0 0.0025 17.8 0.0 2.9 3 0 0 3 3 3 2 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|300710328|ref|YP_003736142.1| - 0.00063 19.2 0.0 0.0013 18.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 gi|300710329|ref|YP_003736143.1| - 1.3e-11 44.9 0.0 2.3e-11 44.0 0.0 1.4 1 0 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|300710329|ref|YP_003736143.1| - 6.5e-08 32.3 0.0 7.8e-07 28.7 0.0 2.1 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|300710329|ref|YP_003736143.1| - 0.00016 21.4 0.0 0.00022 20.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Peptidase_S80 PF07230.11 gi|300710329|ref|YP_003736143.1| - 0.079 11.2 0.0 0.1 10.9 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage T4-like capsid assembly protein (Gp20) DUF3052 PF11253.8 gi|300710329|ref|YP_003736143.1| - 1.1 9.1 6.0 24 4.8 3.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3052) NMT1 PF09084.11 gi|300710330|ref|YP_003736144.1| - 2.3e-37 129.1 0.0 3.9e-37 128.3 0.0 1.4 2 0 0 2 2 2 1 NMT1/THI5 like NMT1_2 PF13379.6 gi|300710330|ref|YP_003736144.1| - 1.1e-06 28.5 0.1 1.2e-05 25.2 0.1 2.4 1 1 0 1 1 1 1 NMT1-like family Phosphonate-bd PF12974.7 gi|300710330|ref|YP_003736144.1| - 1.6e-06 27.9 0.1 2.5e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Na_Ca_ex PF01699.24 gi|300710331|ref|YP_003736145.1| - 2e-27 96.0 35.0 2.3e-18 66.6 10.5 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Kinocilin PF15033.6 gi|300710331|ref|YP_003736145.1| - 0.039 13.6 1.5 3.1 7.5 0.0 2.8 2 0 0 2 2 2 0 Kinocilin protein Na_Ca_ex PF01699.24 gi|300710332|ref|YP_003736146.1| - 5.7e-21 75.0 50.8 7.4e-19 68.2 15.0 2.4 3 0 0 3 3 3 2 Sodium/calcium exchanger protein DUF2070 PF09843.9 gi|300710332|ref|YP_003736146.1| - 4.4 5.5 21.1 0.45 8.8 7.5 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2070) Glyoxalase PF00903.25 gi|300710333|ref|YP_003736147.1| - 8.4e-08 32.5 0.9 1.2e-06 28.7 0.9 2.1 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300710333|ref|YP_003736147.1| - 0.0054 17.5 0.1 0.015 16.1 0.1 1.7 1 1 0 1 1 1 1 Glyoxalase-like domain TrkA_N PF02254.18 gi|300710334|ref|YP_003736148.1| - 1.8e-30 105.6 1.2 3e-30 104.9 1.2 1.4 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 gi|300710334|ref|YP_003736148.1| - 0.0066 16.9 0.3 0.013 15.9 0.3 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding AdoHcyase_NAD PF00670.21 gi|300710334|ref|YP_003736148.1| - 0.019 15.1 1.0 0.051 13.6 0.2 1.9 1 1 1 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 3HCDH_N PF02737.18 gi|300710334|ref|YP_003736148.1| - 0.042 13.7 0.2 0.068 13.1 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short PF00106.25 gi|300710334|ref|YP_003736148.1| - 0.053 13.0 0.3 0.085 12.3 0.3 1.3 1 0 0 1 1 1 0 short chain dehydrogenase F420_oxidored PF03807.17 gi|300710334|ref|YP_003736148.1| - 0.055 14.1 0.1 0.14 12.8 0.1 1.7 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 gi|300710334|ref|YP_003736148.1| - 0.077 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NMT1 PF09084.11 gi|300710335|ref|YP_003736149.1| - 9.1e-33 114.0 0.0 1.2e-32 113.7 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 gi|300710335|ref|YP_003736149.1| - 0.00014 21.6 0.2 0.9 9.2 0.0 3.1 2 1 1 3 3 3 2 NMT1-like family SBP_bac_3 PF00497.20 gi|300710335|ref|YP_003736149.1| - 0.024 14.0 0.0 0.23 10.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 BPD_transp_1 PF00528.22 gi|300710336|ref|YP_003736150.1| - 7.3e-22 78.0 19.4 7.3e-22 78.0 19.4 2.0 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|300710337|ref|YP_003736151.1| - 3.8e-18 65.9 16.0 3.8e-18 65.9 16.0 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|300710338|ref|YP_003736152.1| - 5.2e-29 101.5 0.0 7.1e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710338|ref|YP_003736152.1| - 1.8e-05 24.7 0.1 0.0039 17.0 0.0 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|300710338|ref|YP_003736152.1| - 6.4e-05 21.9 0.7 0.038 12.8 0.0 2.7 2 1 1 3 3 3 2 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|300710338|ref|YP_003736152.1| - 0.0001 22.7 0.1 0.00015 22.2 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|300710338|ref|YP_003736152.1| - 0.00076 19.7 0.0 0.0011 19.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|300710338|ref|YP_003736152.1| - 0.0011 19.2 0.3 0.0032 17.7 0.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|300710338|ref|YP_003736152.1| - 0.0019 18.7 0.0 0.003 18.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|300710338|ref|YP_003736152.1| - 0.0023 17.6 0.0 0.0042 16.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|300710338|ref|YP_003736152.1| - 0.0076 16.0 0.2 0.025 14.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|300710338|ref|YP_003736152.1| - 0.013 15.4 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|300710338|ref|YP_003736152.1| - 0.023 15.1 1.3 0.037 14.5 0.2 1.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|300710338|ref|YP_003736152.1| - 0.023 14.1 0.0 0.2 11.0 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 gi|300710338|ref|YP_003736152.1| - 0.027 14.1 0.0 0.067 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|300710338|ref|YP_003736152.1| - 0.028 14.4 0.2 0.063 13.2 0.2 1.6 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 gi|300710338|ref|YP_003736152.1| - 0.029 13.6 0.2 0.048 12.8 0.2 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|300710338|ref|YP_003736152.1| - 0.032 14.2 0.0 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|300710338|ref|YP_003736152.1| - 0.038 14.2 1.1 0.17 12.1 0.5 2.1 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|300710338|ref|YP_003736152.1| - 0.056 13.2 0.0 0.096 12.4 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 gi|300710338|ref|YP_003736152.1| - 0.057 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 gi|300710338|ref|YP_003736152.1| - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|300710338|ref|YP_003736152.1| - 0.062 13.8 0.0 0.15 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|300710338|ref|YP_003736152.1| - 0.086 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain Zeta_toxin PF06414.12 gi|300710338|ref|YP_003736152.1| - 0.11 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 gi|300710338|ref|YP_003736152.1| - 0.12 12.2 0.2 2.9 7.8 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_15 PF13175.6 gi|300710338|ref|YP_003736152.1| - 0.24 11.1 0.0 0.34 10.6 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain NMT1 PF09084.11 gi|300710339|ref|YP_003736153.1| - 6.3e-22 78.6 0.0 8.4e-22 78.2 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|300710339|ref|YP_003736153.1| - 1.6e-07 31.2 0.1 2.5e-07 30.6 0.1 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein MarR_2 PF12802.7 gi|300710339|ref|YP_003736153.1| - 6.7e-05 22.7 0.3 0.00027 20.8 0.3 2.1 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|300710339|ref|YP_003736153.1| - 0.0005 19.9 0.0 0.0014 18.6 0.0 1.7 1 0 0 1 1 1 1 MarR family SBP_bac_3 PF00497.20 gi|300710339|ref|YP_003736153.1| - 0.0078 15.7 0.0 0.015 14.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 HTH_CodY PF08222.11 gi|300710339|ref|YP_003736153.1| - 0.14 11.8 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF4242 PF14026.6 gi|300710340|ref|YP_003736154.1| - 8.2e-20 70.8 0.2 9.6e-20 70.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4242) YCII PF03795.14 gi|300710340|ref|YP_003736154.1| - 0.034 14.6 0.2 0.04 14.3 0.2 1.1 1 0 0 1 1 1 0 YCII-related domain DUF883 PF05957.13 gi|300710340|ref|YP_003736154.1| - 0.055 14.1 0.1 0.061 13.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Radical_SAM PF04055.21 gi|300710342|ref|YP_003736156.1| - 0.029 14.7 0.6 0.085 13.2 0.6 1.9 1 1 0 1 1 1 0 Radical SAM superfamily DUF4097 PF13349.6 gi|300710344|ref|YP_003736158.1| - 1.5e-08 34.3 0.9 2.8e-08 33.4 0.9 1.4 1 1 0 1 1 1 1 Putative adhesin Flagellin_D3 PF08884.11 gi|300710344|ref|YP_003736158.1| - 2.3 8.6 9.5 0.88 10.0 3.1 3.3 3 2 0 3 3 3 0 Flagellin D3 domain GATase_5 PF13507.6 gi|300710345|ref|YP_003736159.1| - 5.4e-43 147.0 0.0 6.6e-43 146.7 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|300710345|ref|YP_003736159.1| - 4e-07 30.0 0.0 4.7e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|300710345|ref|YP_003736159.1| - 0.00016 21.3 0.0 0.00035 20.2 0.0 1.7 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|300710345|ref|YP_003736159.1| - 0.00023 21.0 0.0 0.00036 20.4 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family RHS_repeat PF05593.14 gi|300710345|ref|YP_003736159.1| - 0.0023 18.4 0.1 0.0072 16.8 0.0 1.9 2 0 0 2 2 2 1 RHS Repeat Peptidase_C26 PF07722.13 gi|300710345|ref|YP_003736159.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 PurS PF02700.14 gi|300710346|ref|YP_003736160.1| - 2.1e-25 88.7 0.0 2.3e-25 88.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase DUF3775 PF12616.8 gi|300710346|ref|YP_003736160.1| - 0.06 13.4 0.6 0.083 12.9 0.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3775) Formyl_trans_N PF00551.19 gi|300710347|ref|YP_003736161.1| - 2.3e-39 135.0 0.0 3.4e-39 134.5 0.0 1.3 1 0 0 1 1 1 1 Formyl transferase ACT_6 PF13740.6 gi|300710347|ref|YP_003736161.1| - 9.6e-11 41.5 0.4 2.4e-10 40.2 0.4 1.6 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|300710347|ref|YP_003736161.1| - 2.1e-06 27.4 0.2 7.3e-06 25.6 0.2 2.0 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|300710347|ref|YP_003736161.1| - 4.2e-05 24.1 0.1 0.00012 22.6 0.1 1.7 2 0 0 2 2 2 1 ACT domain SAICAR_synt PF01259.18 gi|300710348|ref|YP_003736162.1| - 1.3e-22 80.7 0.0 2.5e-22 79.7 0.0 1.4 1 1 0 1 1 1 1 SAICAR synthetase zf-ANAPC11 PF12861.7 gi|300710349|ref|YP_003736163.1| - 0.0033 17.4 0.7 0.0046 17.0 0.7 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zinc_ribbon_2 PF13240.6 gi|300710349|ref|YP_003736163.1| - 0.29 10.9 4.0 7.5 6.4 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 gi|300710349|ref|YP_003736163.1| - 1.7 8.8 5.4 6.4 7.0 0.2 2.6 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 SIR2 PF02146.17 gi|300710350|ref|YP_003736164.1| - 2.6e-45 154.5 0.0 3.1e-45 154.2 0.0 1.1 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.22 gi|300710350|ref|YP_003736164.1| - 0.0092 15.7 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, central domain Lactamase_B PF00753.27 gi|300710351|ref|YP_003736165.1| - 6.2e-23 81.8 11.0 7.5e-23 81.6 11.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300710351|ref|YP_003736165.1| - 8.7e-08 31.9 1.0 1.3e-07 31.4 1.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Bac_luciferase PF00296.20 gi|300710352|ref|YP_003736166.1| - 1.5e-51 175.7 13.5 2e-51 175.3 13.5 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase HAD_2 PF13419.6 gi|300710353|ref|YP_003736167.1| - 8e-21 74.9 0.0 1.1e-20 74.4 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300710353|ref|YP_003736167.1| - 3.3e-12 47.2 0.2 2.4e-11 44.3 0.2 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710353|ref|YP_003736167.1| - 1.2e-11 44.5 0.1 3.6e-11 43.0 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|300710353|ref|YP_003736167.1| - 0.022 15.2 0.4 0.026 14.9 0.4 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.21 gi|300710354|ref|YP_003736168.1| - 8.9e-16 58.7 0.2 3.1e-15 56.9 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Zn_dep_PLPC PF00882.18 gi|300710355|ref|YP_003736169.1| - 0.00037 20.6 0.0 0.00051 20.1 0.0 1.2 1 0 0 1 1 1 1 Zinc dependent phospholipase C YdjM PF04307.14 gi|300710355|ref|YP_003736169.1| - 0.00052 19.4 16.4 0.0049 16.2 16.4 2.2 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Radical_SAM PF04055.21 gi|300710356|ref|YP_003736170.1| - 2.7e-15 57.2 0.0 9.8e-15 55.3 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily CofC PF01983.16 gi|300710357|ref|YP_003736171.1| - 1.1e-40 139.1 0.0 1.3e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|300710357|ref|YP_003736171.1| - 0.002 18.5 0.4 0.0036 17.7 0.2 1.6 1 1 0 1 1 1 1 MobA-like NTP transferase domain Tubulin PF00091.25 gi|300710358|ref|YP_003736172.1| - 1.2e-25 90.9 0.0 2.2e-25 90.0 0.0 1.5 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 gi|300710358|ref|YP_003736172.1| - 0.018 14.2 0.2 0.027 13.7 0.2 1.4 1 0 0 1 1 1 0 Tubulin like NAD_binding_10 PF13460.6 gi|300710359|ref|YP_003736173.1| - 4.6e-30 104.9 0.0 6.3e-30 104.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|300710359|ref|YP_003736173.1| - 4.8e-22 78.6 0.0 2.4e-21 76.3 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|300710359|ref|YP_003736173.1| - 2.8e-15 56.1 0.0 4.4e-14 52.2 0.0 2.0 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|300710359|ref|YP_003736173.1| - 1.5e-14 53.8 0.0 5.7e-13 48.6 0.0 2.2 1 1 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|300710359|ref|YP_003736173.1| - 2.6e-13 50.1 0.0 3.9e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 gi|300710359|ref|YP_003736173.1| - 2.1e-08 33.7 0.0 0.00065 18.9 0.0 2.4 2 1 1 3 3 3 2 Male sterility protein GDP_Man_Dehyd PF16363.5 gi|300710359|ref|YP_003736173.1| - 4e-07 29.7 0.0 7.1e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase adh_short PF00106.25 gi|300710359|ref|YP_003736173.1| - 0.00023 20.7 0.0 0.00029 20.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Polysacc_synt_2 PF02719.15 gi|300710359|ref|YP_003736173.1| - 0.00024 20.3 0.4 0.01 15.0 0.4 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Glyco_trans_4_4 PF13579.6 gi|300710359|ref|YP_003736173.1| - 0.0013 19.2 0.5 0.0025 18.2 0.5 1.8 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain KR PF08659.10 gi|300710359|ref|YP_003736173.1| - 0.006 16.5 0.1 0.013 15.4 0.1 1.5 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 gi|300710359|ref|YP_003736173.1| - 0.0075 15.9 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Glyco_transf_4 PF13439.6 gi|300710359|ref|YP_003736173.1| - 0.011 15.7 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 TrkA_N PF02254.18 gi|300710359|ref|YP_003736173.1| - 0.019 15.2 0.1 0.049 13.9 0.0 1.8 2 0 0 2 2 2 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|300710359|ref|YP_003736173.1| - 0.098 12.2 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thymidylate_kin PF02223.17 gi|300710360|ref|YP_003736174.1| - 2.5e-39 134.9 0.0 2.8e-39 134.7 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|300710360|ref|YP_003736174.1| - 1.8e-06 28.0 0.0 3.8e-05 23.6 0.0 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_33 PF13671.6 gi|300710360|ref|YP_003736174.1| - 0.00081 19.6 0.0 0.0021 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|300710360|ref|YP_003736174.1| - 0.002 18.7 0.0 0.0085 16.6 0.0 2.1 1 1 1 2 2 2 1 AAA domain CPT PF07931.12 gi|300710360|ref|YP_003736174.1| - 0.01 15.7 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_28 PF13521.6 gi|300710360|ref|YP_003736174.1| - 0.012 15.9 0.0 0.015 15.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|300710360|ref|YP_003736174.1| - 0.064 13.7 0.0 5.9 7.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain MadL PF03817.13 gi|300710361|ref|YP_003736175.1| - 0.06 13.4 2.5 0.094 12.8 2.5 1.3 1 0 0 1 1 1 0 Malonate transporter MadL subunit E1_dh PF00676.20 gi|300710362|ref|YP_003736176.1| - 1.5e-71 240.8 0.0 2e-71 240.4 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|300710362|ref|YP_003736176.1| - 0.00026 20.8 0.0 0.0013 18.5 0.0 2.0 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|300710362|ref|YP_003736176.1| - 0.00084 18.6 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_N PF00456.21 gi|300710362|ref|YP_003736176.1| - 0.0048 15.9 0.0 0.0083 15.1 0.0 1.4 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain AsnC_trans_reg PF01037.21 gi|300710363|ref|YP_003736177.1| - 2.6e-11 43.3 1.0 2.9e-11 43.2 1.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain DoxX PF07681.12 gi|300710364|ref|YP_003736178.1| - 3.2e-07 30.8 4.7 4.4e-07 30.4 4.7 1.1 1 0 0 1 1 1 1 DoxX HR_lesion PF05514.11 gi|300710364|ref|YP_003736178.1| - 0.0013 18.9 0.0 0.076 13.2 0.0 2.1 1 1 0 2 2 2 2 HR-like lesion-inducing Glyoxalase PF00903.25 gi|300710365|ref|YP_003736179.1| - 1.8e-17 63.8 4.1 1.8e-11 44.3 0.8 2.6 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300710365|ref|YP_003736179.1| - 0.052 13.8 0.2 2.4 8.5 0.1 2.5 2 0 0 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TetR_N PF00440.23 gi|300710366|ref|YP_003736180.1| - 1.9e-09 37.1 0.0 4.5e-09 36.0 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 gi|300710366|ref|YP_003736180.1| - 6.9e-07 29.5 0.4 1.6e-06 28.4 0.4 1.5 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_17 PF17922.1 gi|300710366|ref|YP_003736180.1| - 0.00048 20.2 0.1 0.0049 16.9 0.0 2.1 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_27 PF17935.1 gi|300710366|ref|YP_003736180.1| - 0.00067 19.7 0.5 0.0029 17.7 0.2 2.2 3 0 0 3 3 3 1 Tetracyclin repressor-like, C-terminal domain TetR_C_24 PF17932.1 gi|300710366|ref|YP_003736180.1| - 0.032 14.5 0.1 0.43 10.9 0.1 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain FAA_hydrolase PF01557.18 gi|300710367|ref|YP_003736181.1| - 6e-69 232.0 0.0 9.6e-69 231.4 0.0 1.3 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family TatD_DNase PF01026.21 gi|300710368|ref|YP_003736182.1| - 5.7e-11 42.3 0.0 1.3e-10 41.1 0.0 1.6 1 1 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|300710368|ref|YP_003736182.1| - 1.5e-05 24.9 0.0 3.1e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Amidohydrolase TrkA_N PF02254.18 gi|300710369|ref|YP_003736183.1| - 7.8e-18 64.8 0.0 1.3e-17 64.1 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|300710369|ref|YP_003736183.1| - 9.1e-13 47.8 0.0 1.9e-12 46.8 0.0 1.5 1 0 0 1 1 1 1 TrkA-C domain AsnC_trans_reg PF01037.21 gi|300710370|ref|YP_003736184.1| - 6e-12 45.4 0.0 6.6e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain BAT PF15915.5 gi|300710370|ref|YP_003736184.1| - 0.032 14.1 0.1 0.035 14.0 0.1 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain ZapD PF07072.11 gi|300710372|ref|YP_003736186.1| - 0.046 13.5 0.3 0.048 13.4 0.3 1.2 1 0 0 1 1 1 0 Cell division protein DUF2680 PF10925.8 gi|300710372|ref|YP_003736186.1| - 0.094 12.7 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) FUSC PF04632.12 gi|300710372|ref|YP_003736186.1| - 0.38 9.2 4.9 0.38 9.2 4.9 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family XhlA PF10779.9 gi|300710372|ref|YP_003736186.1| - 4.7 7.5 5.9 2.3 8.5 2.2 1.9 1 1 1 2 2 2 0 Haemolysin XhlA DUF21 PF01595.20 gi|300710373|ref|YP_003736187.1| - 2.9e-46 157.4 3.6 3.7e-46 157.0 3.6 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|300710373|ref|YP_003736187.1| - 1.1e-23 83.0 0.6 1.1e-23 83.0 0.6 2.3 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 gi|300710373|ref|YP_003736187.1| - 6.1e-10 39.4 4.3 6.7e-06 26.5 0.2 2.8 3 0 0 3 3 3 2 CBS domain Methyltrn_RNA_3 PF02598.17 gi|300710374|ref|YP_003736188.1| - 1.1e-66 225.3 0.0 1.3e-66 225.1 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase Ribosomal_L3 PF00297.22 gi|300710375|ref|YP_003736189.1| - 1.8e-105 353.0 0.0 5.1e-105 351.5 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|300710376|ref|YP_003736190.1| - 1.2e-48 165.3 0.1 1.4e-48 165.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|300710377|ref|YP_003736191.1| - 1.1e-16 61.0 0.7 7.1e-16 58.3 0.7 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L2_C PF03947.18 gi|300710378|ref|YP_003736192.1| - 3e-45 153.5 1.7 4.6e-45 152.9 1.7 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|300710378|ref|YP_003736192.1| - 9.4e-15 54.3 0.0 2.4e-14 53.1 0.0 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.21 gi|300710379|ref|YP_003736193.1| - 8.5e-30 102.5 0.0 1.1e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.21 gi|300710379|ref|YP_003736193.1| - 0.03 13.4 0.0 0.03 13.4 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Ribosomal_L22 PF00237.19 gi|300710380|ref|YP_003736194.1| - 1.2e-19 70.4 0.0 1.5e-19 70.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|300710381|ref|YP_003736195.1| - 1.4e-21 76.8 0.3 5.4e-21 74.9 0.3 2.0 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|300710381|ref|YP_003736195.1| - 6.3e-17 61.2 0.1 1.6e-16 59.9 0.1 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|300710381|ref|YP_003736195.1| - 0.017 15.0 1.5 0.051 13.4 0.5 2.3 2 0 0 2 2 2 0 KH domain KH_5 PF13184.6 gi|300710381|ref|YP_003736195.1| - 0.022 14.8 0.0 0.11 12.6 0.0 2.1 2 0 0 2 2 2 0 NusA-like KH domain Ribosomal_L29 PF00831.23 gi|300710382|ref|YP_003736196.1| - 1.2e-18 66.8 0.1 1.5e-18 66.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein PKcGMP_CC PF16808.5 gi|300710382|ref|YP_003736196.1| - 0.058 13.3 1.3 0.25 11.2 0.4 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase RPAP1_N PF08621.10 gi|300710382|ref|YP_003736196.1| - 0.069 12.9 1.0 0.11 12.3 1.0 1.4 1 0 0 1 1 1 0 RPAP1-like, N-terminal UPF0086 PF01868.16 gi|300710383|ref|YP_003736197.1| - 7.1e-27 93.2 0.0 7.9e-27 93.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.20 gi|300710384|ref|YP_003736198.1| - 1e-23 83.2 2.3 1.3e-23 82.8 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|300710384|ref|YP_003736198.1| - 0.00014 22.1 0.0 0.00028 21.2 0.0 1.5 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|300710385|ref|YP_003736199.1| - 1.8e-35 121.7 0.4 2.1e-35 121.4 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L19 PF01245.20 gi|300710385|ref|YP_003736199.1| - 0.043 13.7 0.2 0.06 13.3 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L19 Ribosomal_L26 PF16906.5 gi|300710386|ref|YP_003736200.1| - 5.2e-20 71.7 0.0 6.4e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|300710386|ref|YP_003736200.1| - 1.9e-08 34.0 4.4 3.1e-08 33.3 4.4 1.4 1 0 0 1 1 1 1 KOW motif Cupin_2 PF07883.11 gi|300710386|ref|YP_003736200.1| - 0.075 12.8 1.0 0.22 11.2 0.2 1.9 1 1 1 2 2 2 0 Cupin domain Ribosomal_S4e PF00900.20 gi|300710387|ref|YP_003736201.1| - 3.2e-20 71.8 0.0 6.9e-20 70.7 0.0 1.6 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|300710387|ref|YP_003736201.1| - 5.5e-11 42.4 0.1 9.1e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|300710387|ref|YP_003736201.1| - 0.00058 19.5 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 gi|300710387|ref|YP_003736201.1| - 0.28 11.2 0.1 0.28 11.2 0.1 2.7 4 0 0 4 4 4 0 KOW motif Ribosomal_L5_C PF00673.21 gi|300710388|ref|YP_003736202.1| - 3.3e-19 68.8 0.0 6e-19 68.0 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|300710388|ref|YP_003736202.1| - 5.7e-18 65.0 0.3 2e-17 63.3 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|300710389|ref|YP_003736203.1| - 5.5e-11 42.1 2.2 6e-11 41.9 2.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DUF4428 PF14471.6 gi|300710389|ref|YP_003736203.1| - 0.0013 18.6 0.6 0.0016 18.3 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) Ribosomal_S8 PF00410.19 gi|300710390|ref|YP_003736204.1| - 4.1e-23 81.7 0.0 5e-23 81.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|300710391|ref|YP_003736205.1| - 7e-25 87.5 4.2 1.7e-12 47.8 0.3 3.0 2 1 0 2 2 2 2 Ribosomal protein L6 Ribosomal_L32e PF01655.18 gi|300710392|ref|YP_003736206.1| - 7.4e-34 116.4 0.2 2.1e-33 114.9 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L32 HHH_5 PF14520.6 gi|300710392|ref|YP_003736206.1| - 1.3e-12 48.1 0.8 6.1e-12 46.0 0.5 2.1 2 1 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|300710392|ref|YP_003736206.1| - 3.5e-08 32.9 0.5 0.0043 16.9 0.1 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|300710392|ref|YP_003736206.1| - 2.5e-06 27.2 0.0 7.5e-06 25.7 0.0 1.9 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 gi|300710392|ref|YP_003736206.1| - 9.5e-06 25.6 0.4 2e-05 24.6 0.4 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|300710392|ref|YP_003736206.1| - 0.0026 18.0 0.1 0.24 11.7 0.1 2.7 2 1 1 3 3 3 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|300710392|ref|YP_003736206.1| - 0.0043 17.3 0.0 0.032 14.5 0.0 2.3 2 1 1 3 3 3 1 Pathogenicity locus HHH_8 PF14716.6 gi|300710392|ref|YP_003736206.1| - 0.0074 16.6 0.4 0.13 12.6 0.2 2.4 1 1 1 2 2 2 1 Helix-hairpin-helix domain LytR_C PF13399.6 gi|300710392|ref|YP_003736206.1| - 0.039 14.9 1.9 0.34 11.9 0.9 2.7 2 1 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator IMS_HHH PF11798.8 gi|300710392|ref|YP_003736206.1| - 0.12 12.8 0.0 7.1 7.2 0.0 2.9 2 0 0 2 2 2 0 IMS family HHH motif Ribosomal_L19e PF01280.20 gi|300710393|ref|YP_003736207.1| - 3.7e-56 189.2 9.3 4.1e-56 189.1 9.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e SHOCT PF09851.9 gi|300710393|ref|YP_003736207.1| - 0.0098 15.6 1.0 0.0098 15.6 1.0 3.1 3 1 2 5 5 5 1 Short C-terminal domain SAND PF01342.21 gi|300710393|ref|YP_003736207.1| - 0.027 14.2 0.2 0.047 13.4 0.2 1.4 1 0 0 1 1 1 0 SAND domain DUF4019 PF13211.6 gi|300710393|ref|YP_003736207.1| - 0.032 14.6 0.9 0.051 14.0 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4019) TMV_coat PF00721.21 gi|300710393|ref|YP_003736207.1| - 0.083 12.7 0.2 0.1 12.4 0.2 1.1 1 0 0 1 1 1 0 Virus coat protein (TMV like) RP-C PF03428.13 gi|300710393|ref|YP_003736207.1| - 0.44 10.2 7.4 1.5 8.4 7.4 1.7 1 1 0 1 1 1 0 Replication protein C N-terminal domain Tmemb_9 PF05434.11 gi|300710393|ref|YP_003736207.1| - 1.1 9.1 3.7 1.5 8.7 3.7 1.2 1 0 0 1 1 1 0 TMEM9 Ribosomal_L5e PF17144.4 gi|300710394|ref|YP_003736208.1| - 6e-32 110.9 0.0 3.3e-20 72.7 0.0 2.2 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|300710394|ref|YP_003736208.1| - 2.3e-06 28.0 0.0 3.4e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S5_C PF03719.15 gi|300710395|ref|YP_003736209.1| - 1.6e-23 81.9 0.0 2.5e-23 81.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|300710395|ref|YP_003736209.1| - 2.4e-21 75.4 0.3 2.4e-21 75.4 0.3 1.6 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_L30 PF00327.20 gi|300710396|ref|YP_003736210.1| - 1e-11 44.5 0.0 1.7e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L27A PF00828.19 gi|300710397|ref|YP_003736211.1| - 9.4e-17 61.9 0.3 1.5e-16 61.2 0.3 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 gi|300710398|ref|YP_003736212.1| - 6.8e-69 232.4 17.9 8.1e-69 232.2 17.9 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|300710398|ref|YP_003736212.1| - 4.6e-13 48.8 0.7 1.6e-12 47.0 0.7 2.1 1 0 0 1 1 1 1 Plug domain of Sec61p Phage_integrase PF00589.22 gi|300710399|ref|YP_003736213.1| - 2.2e-13 50.4 0.0 4.6e-13 49.3 0.0 1.6 1 0 0 1 1 1 1 Phage integrase family zinc_ribbon_2 PF13240.6 gi|300710399|ref|YP_003736213.1| - 1.9e-05 24.2 4.5 3.4e-05 23.4 4.5 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|300710399|ref|YP_003736213.1| - 3e-05 23.9 0.4 5.5e-05 23.1 0.4 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|300710399|ref|YP_003736213.1| - 0.00093 19.9 0.2 0.0016 19.1 0.2 1.4 1 0 0 1 1 1 1 zinc-ribbon family DUF3435 PF11917.8 gi|300710399|ref|YP_003736213.1| - 0.0048 15.9 0.0 0.0093 14.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3435) Cytochrom_c3_2 PF14537.6 gi|300710399|ref|YP_003736213.1| - 0.029 14.8 0.4 0.057 13.9 0.4 1.5 1 0 0 1 1 1 0 Cytochrome c3 zf-NADH-PPase PF09297.11 gi|300710399|ref|YP_003736213.1| - 0.065 12.9 0.1 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300710399|ref|YP_003736213.1| - 0.066 12.6 3.6 0.14 11.6 3.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|300710399|ref|YP_003736213.1| - 0.075 13.0 0.9 0.26 11.3 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal Hjc PF01870.18 gi|300710401|ref|YP_003736215.1| - 2.4e-09 37.0 0.0 4.3e-08 33.0 0.0 2.0 2 0 0 2 2 2 1 Archaeal holliday junction resolvase (hjc) Acetyltransf_CG PF14542.6 gi|300710402|ref|YP_003736216.1| - 0.065 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Flavi_M PF01004.19 gi|300710405|ref|YP_003736219.1| - 0.16 11.7 1.4 0.21 11.4 1.4 1.2 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M DUF5325 PF17259.2 gi|300710405|ref|YP_003736219.1| - 0.86 9.5 5.7 1.2 9.0 5.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5325) DUF3052 PF11253.8 gi|300710407|ref|YP_003736221.1| - 0.03 14.2 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3052) HTH_20 PF12840.7 gi|300710408|ref|YP_003736222.1| - 0.012 15.6 0.3 0.03 14.4 0.3 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_15 PF12324.8 gi|300710408|ref|YP_003736222.1| - 0.022 14.7 0.2 0.2 11.6 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase Antirestrict PF03230.13 gi|300710408|ref|YP_003736222.1| - 0.11 12.6 0.0 14 5.8 0.0 2.1 2 0 0 2 2 2 0 Antirestriction protein Tautomerase_2 PF14552.6 gi|300710409|ref|YP_003736223.1| - 0.1 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Tautomerase enzyme PCNA_N PF00705.18 gi|300710412|ref|YP_003736226.1| - 0.0011 18.7 0.0 0.002 17.8 0.0 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|300710412|ref|YP_003736226.1| - 0.11 12.6 0.0 0.3 11.2 0.0 1.7 2 0 0 2 2 2 0 Proliferating cell nuclear antigen, C-terminal domain PadR PF03551.14 gi|300710413|ref|YP_003736227.1| - 3.2e-16 59.0 0.5 4e-16 58.7 0.5 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|300710413|ref|YP_003736227.1| - 4.3e-05 23.4 0.0 6.3e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|300710413|ref|YP_003736227.1| - 0.00065 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_27 PF13463.6 gi|300710413|ref|YP_003736227.1| - 0.0015 19.0 0.1 0.0019 18.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|300710413|ref|YP_003736227.1| - 0.0062 16.7 0.1 0.028 14.6 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain Mrr_N PF14338.6 gi|300710413|ref|YP_003736227.1| - 0.016 15.4 0.1 0.035 14.2 0.1 1.6 1 1 1 2 2 2 0 Mrr N-terminal domain DUF4364 PF14277.6 gi|300710413|ref|YP_003736227.1| - 0.029 14.1 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) HxlR PF01638.17 gi|300710413|ref|YP_003736227.1| - 0.085 12.7 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|300710414|ref|YP_003736228.1| - 0.0004 20.3 0.0 0.00092 19.1 0.0 1.6 1 1 1 2 2 2 1 Winged helix-turn-helix CtsR_C PF17727.1 gi|300710414|ref|YP_003736228.1| - 0.0027 17.8 0.3 0.0041 17.2 0.1 1.4 2 0 0 2 2 2 1 CtsR C-terminal dimerization domain Replic_Relax PF13814.6 gi|300710414|ref|YP_003736228.1| - 0.012 15.7 0.0 0.015 15.4 0.0 1.0 1 0 0 1 1 1 0 Replication-relaxation HxlR PF01638.17 gi|300710414|ref|YP_003736228.1| - 0.036 13.9 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF2398 PF09661.10 gi|300710414|ref|YP_003736228.1| - 0.09 12.0 0.0 0.098 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2398) DUF1495 PF07381.11 gi|300710414|ref|YP_003736228.1| - 0.12 12.3 0.0 0.15 11.9 0.0 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) TrmB PF01978.19 gi|300710414|ref|YP_003736228.1| - 0.16 11.9 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.12 gi|300710415|ref|YP_003736229.1| - 7.4e-11 41.6 0.1 9.1e-11 41.3 0.1 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain FaeA PF04703.12 gi|300710415|ref|YP_003736229.1| - 2.6e-06 27.7 0.0 3e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 FaeA-like protein HTH_24 PF13412.6 gi|300710415|ref|YP_003736229.1| - 0.00011 21.6 0.0 0.00015 21.3 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|300710415|ref|YP_003736229.1| - 0.00052 19.8 0.1 0.00064 19.5 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|300710415|ref|YP_003736229.1| - 0.00053 19.9 0.0 0.0007 19.5 0.0 1.2 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 gi|300710415|ref|YP_003736229.1| - 0.0015 18.7 0.1 0.0018 18.4 0.1 1.1 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|300710415|ref|YP_003736229.1| - 0.0017 18.3 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DDRGK PF09756.9 gi|300710415|ref|YP_003736229.1| - 0.006 16.2 0.0 0.0067 16.0 0.0 1.0 1 0 0 1 1 1 1 DDRGK domain HTH_AraC PF00165.23 gi|300710415|ref|YP_003736229.1| - 0.0078 16.3 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family FCSD-flav_bind PF09242.11 gi|300710415|ref|YP_003736229.1| - 0.01 16.1 0.1 0.014 15.8 0.1 1.2 1 0 0 1 1 1 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding HTH_AsnC-type PF13404.6 gi|300710415|ref|YP_003736229.1| - 0.011 15.6 0.3 0.021 14.6 0.1 1.6 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_17 PF12728.7 gi|300710415|ref|YP_003736229.1| - 0.011 15.9 0.1 0.045 13.9 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain DUF977 PF06163.11 gi|300710415|ref|YP_003736229.1| - 0.017 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) Ribosomal_S25 PF03297.15 gi|300710415|ref|YP_003736229.1| - 0.019 15.2 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 S25 ribosomal protein HTH_20 PF12840.7 gi|300710415|ref|YP_003736229.1| - 0.019 15.0 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|300710415|ref|YP_003736229.1| - 0.021 14.5 0.4 0.032 13.9 0.4 1.4 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_Tnp_ISL3 PF13542.6 gi|300710415|ref|YP_003736229.1| - 0.023 14.1 0.0 0.037 13.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MarR PF01047.22 gi|300710415|ref|YP_003736229.1| - 0.027 14.4 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 MarR family Sigma70_r4 PF04545.16 gi|300710415|ref|YP_003736229.1| - 0.029 13.9 0.2 0.043 13.3 0.1 1.4 1 1 0 1 1 1 0 Sigma-70, region 4 Sigma_reg_C PF13791.6 gi|300710415|ref|YP_003736229.1| - 0.04 14.1 0.0 0.045 14.0 0.0 1.1 1 0 0 1 1 1 0 Sigma factor regulator C-terminal Rrf2 PF02082.20 gi|300710415|ref|YP_003736229.1| - 0.042 14.2 0.0 0.064 13.6 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.7 gi|300710415|ref|YP_003736229.1| - 0.046 13.6 0.0 0.055 13.4 0.0 1.3 1 1 0 1 1 1 0 MarR family HTH_23 PF13384.6 gi|300710415|ref|YP_003736229.1| - 0.06 13.2 0.3 0.093 12.6 0.3 1.4 1 1 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.12 gi|300710415|ref|YP_003736229.1| - 0.063 13.1 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_19 PF12844.7 gi|300710415|ref|YP_003736229.1| - 0.078 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain FeoC PF09012.10 gi|300710415|ref|YP_003736229.1| - 0.078 13.1 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF2089 PF09862.9 gi|300710415|ref|YP_003736229.1| - 0.093 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) HTH_IclR PF09339.10 gi|300710415|ref|YP_003736229.1| - 0.13 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF4951 PF16309.5 gi|300710415|ref|YP_003736229.1| - 0.13 12.3 0.0 0.21 11.7 0.0 1.3 1 1 0 1 1 1 0 Domian of unknown function (DUF4951) Mga PF05043.13 gi|300710415|ref|YP_003736229.1| - 0.22 12.1 0.0 0.29 11.8 0.0 1.1 1 0 0 1 1 1 0 Mga helix-turn-helix domain SNN_transmemb PF09049.10 gi|300710419|ref|YP_003736233.1| - 0.068 13.1 6.3 0.085 12.8 6.3 1.1 1 0 0 1 1 1 0 Stannin transmembrane TMIE PF16038.5 gi|300710419|ref|YP_003736233.1| - 0.083 12.7 4.9 0.091 12.6 4.9 1.1 1 0 0 1 1 1 0 TMIE protein Shisa PF13908.6 gi|300710419|ref|YP_003736233.1| - 4.9 7.3 4.7 4.8 7.4 4.7 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TackOD1 PF18551.1 gi|300710422|ref|YP_003736236.1| - 0.0078 15.9 0.4 0.0085 15.8 0.4 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 tRNA-synt_1g PF09334.11 gi|300710422|ref|YP_003736236.1| - 0.012 14.4 0.2 0.013 14.2 0.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) HypA PF01155.19 gi|300710422|ref|YP_003736236.1| - 0.022 14.8 0.8 0.025 14.6 0.8 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|300710422|ref|YP_003736236.1| - 0.024 14.7 1.3 0.033 14.2 1.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF2321 PF10083.9 gi|300710422|ref|YP_003736236.1| - 0.026 14.2 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zinc_ribbon_2 PF13240.6 gi|300710422|ref|YP_003736236.1| - 0.032 14.0 2.1 0.16 11.7 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|300710422|ref|YP_003736236.1| - 0.038 13.8 1.1 0.56 10.0 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|300710422|ref|YP_003736236.1| - 0.062 13.5 1.5 0.1 12.8 1.5 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn-ribbon_8 PF09723.10 gi|300710422|ref|YP_003736236.1| - 0.081 13.1 2.4 0.19 11.9 2.4 1.6 1 1 1 2 2 2 0 Zinc ribbon domain zf-NADH-PPase PF09297.11 gi|300710422|ref|YP_003736236.1| - 0.14 11.8 4.2 1.2 8.8 3.3 2.2 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|300710422|ref|YP_003736236.1| - 0.23 11.0 2.1 1.3 8.6 0.2 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding zinc_ribbon_9 PF14369.6 gi|300710422|ref|YP_003736236.1| - 0.46 10.8 4.4 0.61 10.4 0.1 2.2 1 1 1 2 2 2 0 zinc-ribbon Nudix_N_2 PF14803.6 gi|300710422|ref|YP_003736236.1| - 5.8 6.9 7.9 5.8 6.9 2.1 2.7 1 1 2 3 3 3 0 Nudix N-terminal Cellulase PF00150.18 gi|300710423|ref|YP_003736237.1| - 0.17 11.3 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) PspC PF04024.12 gi|300710428|ref|YP_003736242.1| - 0.14 12.0 0.7 0.28 11.0 0.7 1.4 1 0 0 1 1 1 0 PspC domain Phage_integrase PF00589.22 gi|300710432|ref|YP_003736246.1| - 1.2e-08 34.9 0.0 1.4e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Asn_synthase PF00733.21 gi|300710433|ref|YP_003736247.1| - 1.9e-11 44.2 0.0 4.7e-08 33.1 0.0 2.8 3 0 0 3 3 3 2 Asparagine synthase QueC PF06508.13 gi|300710433|ref|YP_003736247.1| - 7.2e-05 22.4 0.0 0.00012 21.7 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|300710433|ref|YP_003736247.1| - 0.0027 16.6 0.0 0.0047 15.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|300710433|ref|YP_003736247.1| - 0.069 12.3 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 NAD synthase Big_6 PF17936.1 gi|300710434|ref|YP_003736248.1| - 0.023 14.9 0.3 2 8.7 0.1 3.5 3 0 0 3 3 3 0 Bacterial Ig domain Pectate_lyase_3 PF12708.7 gi|300710435|ref|YP_003736249.1| - 0.00018 21.4 0.2 0.0004 20.3 0.2 1.6 1 0 0 1 1 1 1 Pectate lyase superfamily protein JIP_LZII PF16471.5 gi|300710437|ref|YP_003736251.1| - 0.053 13.7 0.2 0.08 13.1 0.2 1.2 1 0 0 1 1 1 0 JNK-interacting protein leucine zipper II TACC_C PF05010.14 gi|300710437|ref|YP_003736251.1| - 0.062 13.1 0.5 0.077 12.8 0.5 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF775 PF05603.12 gi|300710437|ref|YP_003736251.1| - 0.08 12.5 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) DUF2612 PF11041.8 gi|300710438|ref|YP_003736252.1| - 5.2e-05 23.3 0.0 0.026 14.5 0.0 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2612) DUF3493 PF11998.8 gi|300710438|ref|YP_003736252.1| - 0.069 13.3 0.1 0.17 12.1 0.1 1.8 1 0 0 1 1 1 0 Low psii accumulation1 / Rep27 Baseplate_J PF04865.14 gi|300710440|ref|YP_003736254.1| - 4.1e-11 42.5 4.4 2.9e-10 39.7 4.4 2.0 1 1 0 1 1 1 1 Baseplate J-like protein DUF3231 PF11553.8 gi|300710440|ref|YP_003736254.1| - 0.16 11.6 0.1 0.27 10.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) Gp138_N PF18352.1 gi|300710442|ref|YP_003736256.1| - 0.03 14.4 0.0 0.065 13.3 0.0 1.6 1 0 0 1 1 1 0 Phage protein Gp138 N-terminal domain PhageMin_Tail PF10145.9 gi|300710446|ref|YP_003736260.1| - 1.9e-41 142.1 24.6 1.9e-41 142.1 24.6 5.6 5 1 2 7 7 7 1 Phage-related minor tail protein DUF4140 PF13600.6 gi|300710446|ref|YP_003736260.1| - 0.46 10.9 2.1 1.2e+02 3.3 1.4 3.9 3 1 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) DUF4177 PF13783.6 gi|300710447|ref|YP_003736261.1| - 0.00054 20.2 0.0 0.00093 19.4 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4177) CAF1A PF12253.8 gi|300710448|ref|YP_003736262.1| - 0.26 11.5 4.6 0.45 10.7 4.6 1.4 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A DUF3383 PF11863.8 gi|300710452|ref|YP_003736266.1| - 0.029 13.4 0.1 0.057 12.4 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3383) Phage_tail_S PF05069.13 gi|300710455|ref|YP_003736269.1| - 1.2e-05 25.2 0.1 1.5e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 Phage virion morphogenesis family PMC2NT PF08066.12 gi|300710457|ref|YP_003736271.1| - 0.1 13.3 0.4 0.15 12.8 0.4 1.4 1 1 0 1 1 1 0 PMC2NT (NUC016) domain Linocin_M18 PF04454.12 gi|300710459|ref|YP_003736273.1| - 4.8e-06 26.0 0.0 7.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Encapsulating protein for peroxidase DUF2213 PF09979.9 gi|300710461|ref|YP_003736275.1| - 0.0031 17.5 0.0 0.011 15.8 0.0 2.0 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2213) AAA_15 PF13175.6 gi|300710461|ref|YP_003736275.1| - 0.3 10.8 4.2 0.25 11.0 0.6 2.0 2 0 0 2 2 2 0 AAA ATPase domain DUF4407 PF14362.6 gi|300710461|ref|YP_003736275.1| - 6.3 6.1 7.1 11 5.3 7.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Phage_Mu_F PF04233.14 gi|300710462|ref|YP_003736276.1| - 2.6e-05 24.9 0.4 0.00014 22.5 0.3 2.3 1 1 0 1 1 1 1 Phage Mu protein F like protein CarboxypepD_reg PF13620.6 gi|300710463|ref|YP_003736277.1| - 0.092 13.0 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain DUF1073 PF06381.11 gi|300710465|ref|YP_003736279.1| - 7.9e-21 74.2 0.0 1.1e-20 73.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1073) Terminase_6C PF17289.2 gi|300710466|ref|YP_003736280.1| - 6.1e-05 23.2 0.0 0.0001 22.4 0.0 1.4 1 0 0 1 1 1 1 Terminase RNaseH-like domain HNH PF01844.23 gi|300710470|ref|YP_003736284.1| - 5.2e-06 26.5 2.5 8.5e-06 25.8 2.5 1.3 1 0 0 1 1 1 1 HNH endonuclease HNH_3 PF13392.6 gi|300710470|ref|YP_003736284.1| - 0.016 15.0 4.3 0.027 14.2 4.3 1.5 1 1 0 1 1 1 0 HNH endonuclease Cytochrom_NNT PF03264.14 gi|300710470|ref|YP_003736284.1| - 0.06 13.0 1.1 2.2 8.0 0.0 2.0 1 1 1 2 2 2 0 NapC/NirT cytochrome c family, N-terminal region HNH_2 PF13391.6 gi|300710470|ref|YP_003736284.1| - 0.093 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 HNH endonuclease zf-C2H2 PF00096.26 gi|300710470|ref|YP_003736284.1| - 0.15 12.6 1.1 0.73 10.4 0.0 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type RNA_GG_bind PF10258.9 gi|300710474|ref|YP_003736288.1| - 0.096 12.7 0.0 0.11 12.5 0.0 1.3 1 1 0 1 1 1 0 PHAX RNA-binding domain NinF PF05810.12 gi|300710476|ref|YP_003736290.1| - 0.0021 17.9 1.5 0.0022 17.8 1.5 1.1 1 0 0 1 1 1 1 NinF protein DAHP_synth_2 PF01474.16 gi|300710477|ref|YP_003736291.1| - 0.044 12.3 0.0 0.044 12.3 0.0 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family Tudor_4 PF18358.1 gi|300710478|ref|YP_003736292.1| - 0.032 13.8 0.0 0.044 13.4 0.0 1.3 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain BPL_C PF02237.17 gi|300710478|ref|YP_003736292.1| - 0.061 13.2 0.7 3.4 7.6 0.0 2.1 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain HTH_24 PF13412.6 gi|300710481|ref|YP_003736295.1| - 0.0057 16.2 0.0 0.0069 15.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|300710481|ref|YP_003736295.1| - 0.0086 15.9 0.1 0.01 15.7 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|300710481|ref|YP_003736295.1| - 0.0094 16.0 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TAT_signal PF10518.9 gi|300710482|ref|YP_003736296.1| - 5e-07 29.3 0.2 7e-07 28.8 0.2 1.2 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence RNA_pol_Rpc4 PF05132.14 gi|300710482|ref|YP_003736296.1| - 0.049 14.0 1.7 0.075 13.5 1.7 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Tim54 PF11711.8 gi|300710482|ref|YP_003736296.1| - 0.18 10.6 3.4 0.21 10.3 3.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Pox_Ag35 PF03286.14 gi|300710482|ref|YP_003736296.1| - 0.24 11.2 10.6 0.33 10.7 10.6 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Presenilin PF01080.17 gi|300710482|ref|YP_003736296.1| - 2 7.1 5.2 2.3 6.9 5.2 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 gi|300710482|ref|YP_003736296.1| - 8.9 5.0 6.8 11 4.7 6.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 TAT_signal PF10518.9 gi|300710483|ref|YP_003736297.1| - 0.0036 17.1 1.0 0.0076 16.1 1.0 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence TrwB_AAD_bind PF10412.9 gi|300710484|ref|YP_003736298.1| - 3.1e-08 32.9 0.0 7e-06 25.2 0.0 2.1 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 gi|300710484|ref|YP_003736298.1| - 0.0013 18.9 0.3 0.0061 16.7 0.3 2.0 1 1 0 1 1 1 1 Helicase HerA, central domain AAA_10 PF12846.7 gi|300710484|ref|YP_003736298.1| - 0.0014 17.7 0.0 0.0024 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain TraG-D_C PF12696.7 gi|300710484|ref|YP_003736298.1| - 0.0015 18.5 0.0 0.0031 17.5 0.0 1.5 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG FtsK_SpoIIIE PF01580.18 gi|300710484|ref|YP_003736298.1| - 0.043 13.2 0.0 0.12 11.7 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family Dehydratase_MU PF02288.15 gi|300710484|ref|YP_003736298.1| - 0.18 11.7 0.0 0.38 10.7 0.0 1.5 1 0 0 1 1 1 0 Dehydratase medium subunit Promethin PF16015.5 gi|300710486|ref|YP_003736300.1| - 0.59 10.1 5.6 0.47 10.4 0.2 2.5 2 0 0 2 2 2 0 Promethin AAA_10 PF12846.7 gi|300710487|ref|YP_003736301.1| - 1.3e-06 27.6 0.0 0.012 14.6 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 gi|300710487|ref|YP_003736301.1| - 5.8e-05 23.4 0.5 0.0015 18.8 0.1 2.6 3 0 0 3 3 3 1 AAA domain AAA_29 PF13555.6 gi|300710487|ref|YP_003736301.1| - 0.029 14.1 0.2 11 5.9 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|300710487|ref|YP_003736301.1| - 0.068 13.6 0.0 0.54 10.6 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain Say1_Mug180 PF10340.9 gi|300710489|ref|YP_003736303.1| - 0.24 10.2 0.3 0.37 9.6 0.3 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase HTH_34 PF13601.6 gi|300710492|ref|YP_003736306.1| - 1.6e-05 25.0 0.1 4.6e-05 23.5 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain PadR PF03551.14 gi|300710492|ref|YP_003736306.1| - 0.0018 18.2 0.2 0.0047 16.9 0.2 1.7 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR_2 PF12802.7 gi|300710492|ref|YP_003736306.1| - 0.013 15.3 0.0 0.033 14.1 0.0 1.7 1 0 0 1 1 1 0 MarR family SMC_ScpB PF04079.16 gi|300710492|ref|YP_003736306.1| - 0.025 14.2 0.8 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Segregation and condensation complex subunit ScpB DUF1495 PF07381.11 gi|300710492|ref|YP_003736306.1| - 0.029 14.2 0.1 0.079 12.8 0.1 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) MarR PF01047.22 gi|300710492|ref|YP_003736306.1| - 0.03 14.2 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 MarR family CCDC-167 PF15188.6 gi|300710492|ref|YP_003736306.1| - 0.071 13.4 0.7 0.16 12.3 0.7 1.6 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 HTH_IclR PF09339.10 gi|300710492|ref|YP_003736306.1| - 0.1 12.4 0.2 0.45 10.4 0.0 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain AAA_31 PF13614.6 gi|300710494|ref|YP_003736308.1| - 5.9e-47 159.9 0.0 7.2e-47 159.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|300710494|ref|YP_003736308.1| - 9.7e-19 67.7 0.0 1.2e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.11 gi|300710494|ref|YP_003736308.1| - 4.4e-11 42.6 1.7 1.5e-05 24.4 0.2 2.2 2 0 0 2 2 2 2 ATPase MipZ CBP_BcsQ PF06564.12 gi|300710494|ref|YP_003736308.1| - 4.5e-10 39.4 0.0 6.3e-10 38.9 0.0 1.3 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ParA PF10609.9 gi|300710494|ref|YP_003736308.1| - 1.7e-09 37.5 1.0 5.6e-08 32.5 0.1 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|300710494|ref|YP_003736308.1| - 5.2e-06 26.1 0.1 0.00019 21.0 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|300710494|ref|YP_003736308.1| - 6.4e-06 25.6 0.5 1.6e-05 24.2 0.1 1.9 2 1 0 2 2 2 1 Anion-transporting ATPase CLP1_P PF16575.5 gi|300710494|ref|YP_003736308.1| - 0.0022 17.8 0.0 0.0078 16.0 0.0 1.8 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop ATP_bind_1 PF03029.17 gi|300710494|ref|YP_003736308.1| - 0.0035 17.1 0.7 0.64 9.7 0.0 2.3 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein FTHFS PF01268.19 gi|300710494|ref|YP_003736308.1| - 0.017 13.4 0.1 0.055 11.7 0.1 1.7 2 0 0 2 2 2 0 Formate--tetrahydrofolate ligase SRP54 PF00448.22 gi|300710494|ref|YP_003736308.1| - 0.15 11.7 0.1 1.8 8.1 0.0 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ABC_tran PF00005.27 gi|300710494|ref|YP_003736308.1| - 0.16 12.4 0.0 0.28 11.7 0.0 1.6 1 1 0 1 1 1 0 ABC transporter N6-adenineMlase PF10237.9 gi|300710494|ref|YP_003736308.1| - 0.19 11.5 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase GIY-YIG PF01541.24 gi|300710495|ref|YP_003736309.1| - 0.00014 22.1 0.0 0.00023 21.3 0.0 1.3 1 0 0 1 1 1 1 GIY-YIG catalytic domain HTH_24 PF13412.6 gi|300710496|ref|YP_003736310.1| - 8.5e-06 25.2 0.0 1.1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300710496|ref|YP_003736310.1| - 0.00029 20.7 0.0 0.00036 20.3 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300710496|ref|YP_003736310.1| - 0.015 15.2 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.12 gi|300710496|ref|YP_003736310.1| - 0.031 13.9 0.0 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_5 PF01022.20 gi|300710496|ref|YP_003736310.1| - 0.038 13.9 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_9 PF08221.11 gi|300710496|ref|YP_003736310.1| - 0.099 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain TFIIE_alpha PF02002.17 gi|300710496|ref|YP_003736310.1| - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit HalOD2 PF18547.1 gi|300710497|ref|YP_003736311.1| - 0.06 13.3 5.3 0.19 11.7 5.3 1.8 1 1 0 1 1 1 0 Halobacterial output domain 2 Zn_ribbon_SprT PF17283.2 gi|300710497|ref|YP_003736311.1| - 0.066 13.1 4.4 0.43 10.5 0.3 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|300710497|ref|YP_003736311.1| - 1.2 8.9 7.5 1.1 9.1 0.2 2.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|300710497|ref|YP_003736311.1| - 1.4 8.4 8.9 1 8.9 1.0 2.5 3 0 0 3 3 3 0 zinc-ribbon domain GerE PF00196.19 gi|300710502|ref|YP_003736316.1| - 0.024 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_WhiA PF02650.14 gi|300710502|ref|YP_003736316.1| - 0.22 11.9 0.0 0.3 11.4 0.0 1.1 1 0 0 1 1 1 0 WhiA C-terminal HTH domain HTH_11 PF08279.12 gi|300710503|ref|YP_003736317.1| - 0.00038 20.3 0.1 0.0015 18.4 0.1 2.1 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 gi|300710503|ref|YP_003736317.1| - 0.00067 19.5 1.2 1.1 9.2 0.2 3.3 2 0 0 2 2 2 2 MarR family HTH_24 PF13412.6 gi|300710503|ref|YP_003736317.1| - 0.0013 18.3 0.3 0.0094 15.5 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|300710503|ref|YP_003736317.1| - 0.011 15.3 5.5 0.098 12.3 0.2 3.9 4 0 0 4 4 4 0 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|300710503|ref|YP_003736317.1| - 0.025 14.6 0.6 0.025 14.6 0.6 3.2 4 0 0 4 4 4 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|300710503|ref|YP_003736317.1| - 0.052 13.4 0.1 0.13 12.1 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|300710503|ref|YP_003736317.1| - 0.069 13.0 0.0 7.7 6.5 0.0 2.5 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|300710503|ref|YP_003736317.1| - 0.08 13.3 0.0 29 5.1 0.0 2.7 2 0 0 2 2 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|300710503|ref|YP_003736317.1| - 0.1 12.6 0.1 0.4 10.7 0.1 2.0 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain S1_2 PF13509.6 gi|300710504|ref|YP_003736318.1| - 0.089 12.9 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 S1 domain Rieske PF00355.26 gi|300710506|ref|YP_003736320.1| - 5.3e-10 39.1 0.0 6.8e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|300710506|ref|YP_003736320.1| - 0.00027 20.8 0.0 0.00032 20.6 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Antifungal_pept PF11410.8 gi|300710506|ref|YP_003736320.1| - 0.13 12.2 0.7 0.27 11.2 0.7 1.5 1 0 0 1 1 1 0 Antifungal peptide ABC2_membrane PF01061.24 gi|300710507|ref|YP_003736321.1| - 1.6e-32 112.6 14.2 2.4e-32 112.1 14.2 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|300710507|ref|YP_003736321.1| - 3.3e-15 56.0 13.3 3.3e-15 56.0 13.3 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|300710507|ref|YP_003736321.1| - 1.9e-05 24.1 20.2 6e-05 22.5 20.2 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein Pox_A9 PF04835.12 gi|300710507|ref|YP_003736321.1| - 0.12 12.5 4.6 1.2 9.3 0.7 2.6 2 0 0 2 2 2 0 A9 protein conserved region ABC2_membrane_4 PF12730.7 gi|300710507|ref|YP_003736321.1| - 2.8 7.9 11.5 12 5.8 11.2 2.1 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|300710508|ref|YP_003736322.1| - 1.6e-29 103.1 0.0 3.2e-29 102.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710508|ref|YP_003736322.1| - 4.1e-15 56.4 0.1 2.2e-09 37.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|300710508|ref|YP_003736322.1| - 2.4e-06 28.1 0.0 6e-06 26.9 0.0 1.7 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_29 PF13555.6 gi|300710508|ref|YP_003736322.1| - 0.0023 17.6 0.1 0.0047 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|300710508|ref|YP_003736322.1| - 0.0051 17.3 0.0 0.0092 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|300710508|ref|YP_003736322.1| - 0.0053 16.2 0.0 0.094 12.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|300710508|ref|YP_003736322.1| - 0.0085 16.5 0.1 0.026 14.9 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_15 PF13175.6 gi|300710508|ref|YP_003736322.1| - 0.013 15.2 0.0 1.6 8.4 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain MeaB PF03308.16 gi|300710508|ref|YP_003736322.1| - 0.047 12.7 0.0 0.069 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 gi|300710508|ref|YP_003736322.1| - 0.051 13.3 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|300710508|ref|YP_003736322.1| - 0.079 13.1 0.2 0.73 10.0 0.0 2.3 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|300710508|ref|YP_003736322.1| - 0.091 12.4 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA PF00004.29 gi|300710508|ref|YP_003736322.1| - 0.12 12.8 0.0 0.34 11.3 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|300710508|ref|YP_003736322.1| - 0.2 11.0 0.0 0.35 10.2 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Cons_hypoth698 PF03601.14 gi|300710511|ref|YP_003736325.1| - 6.9e-64 215.6 16.4 8.3e-64 215.4 16.4 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 KdgT PF03812.13 gi|300710511|ref|YP_003736325.1| - 0.0048 16.3 13.4 0.0048 16.3 13.4 2.8 2 1 1 3 3 3 2 2-keto-3-deoxygluconate permease ADK PF00406.22 gi|300710513|ref|YP_003736327.1| - 4.7e-44 150.1 0.0 7.1e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|300710513|ref|YP_003736327.1| - 7.1e-25 88.0 1.8 2.1e-24 86.5 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|300710513|ref|YP_003736327.1| - 1.3e-10 41.6 0.2 1.3e-08 35.1 0.0 2.1 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|300710513|ref|YP_003736327.1| - 1.7e-08 35.1 0.6 7.5e-08 33.0 0.1 2.0 1 1 1 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|300710513|ref|YP_003736327.1| - 0.0054 16.4 0.3 7.4 6.2 0.0 3.0 2 1 1 3 3 3 1 Thymidylate kinase RuvB_N PF05496.12 gi|300710513|ref|YP_003736327.1| - 0.0087 15.8 0.0 0.023 14.5 0.0 1.7 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 gi|300710513|ref|YP_003736327.1| - 0.017 14.4 0.1 0.039 13.2 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin SKI PF01202.22 gi|300710513|ref|YP_003736327.1| - 0.02 15.0 0.1 0.036 14.2 0.1 1.5 1 1 0 1 1 1 0 Shikimate kinase dNK PF01712.19 gi|300710513|ref|YP_003736327.1| - 0.024 14.5 2.3 1.5 8.6 0.0 3.1 2 2 1 3 3 3 0 Deoxynucleoside kinase Hydin_ADK PF17213.3 gi|300710513|ref|YP_003736327.1| - 0.024 14.9 0.2 0.95 9.7 0.0 2.2 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Ploopntkinase3 PF18751.1 gi|300710513|ref|YP_003736327.1| - 0.033 14.1 0.0 0.14 12.1 0.0 2.0 2 1 1 3 3 3 0 P-loop Nucleotide Kinase3 ADK_lid PF05191.14 gi|300710513|ref|YP_003736327.1| - 0.12 12.4 0.1 0.5 10.4 0.1 2.0 1 1 0 1 1 1 0 Adenylate kinase, active site lid AAA_28 PF13521.6 gi|300710513|ref|YP_003736327.1| - 0.12 12.6 3.4 0.56 10.4 3.4 2.1 1 1 0 1 1 1 0 AAA domain bPH_6 PF10756.9 gi|300710514|ref|YP_003736328.1| - 2.9e-07 30.5 4.6 8.5e-07 29.0 4.6 1.9 1 0 0 1 1 1 1 Bacterial PH domain Clostridium_P47 PF06597.11 gi|300710514|ref|YP_003736328.1| - 0.67 8.6 4.6 1.1 8.0 4.6 1.3 1 0 0 1 1 1 0 Clostridium P-47 protein SHOCT PF09851.9 gi|300710515|ref|YP_003736329.1| - 3.5e-06 26.6 0.0 5.2e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Short C-terminal domain PIG-P PF08510.12 gi|300710515|ref|YP_003736329.1| - 0.05 13.5 0.1 0.059 13.3 0.1 1.3 1 0 0 1 1 1 0 PIG-P CdvA PF18822.1 gi|300710515|ref|YP_003736329.1| - 0.054 13.3 0.0 0.074 12.9 0.0 1.2 1 0 0 1 1 1 0 CdvA-like coiled-coil domain DUF4191 PF13829.6 gi|300710515|ref|YP_003736329.1| - 0.07 12.5 0.1 0.096 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) EMC3_TMCO1 PF01956.16 gi|300710516|ref|YP_003736330.1| - 2.7e-46 157.4 1.5 3.3e-46 157.1 1.5 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like 60KD_IMP PF02096.20 gi|300710516|ref|YP_003736330.1| - 1.6e-08 34.6 0.3 2.8e-08 33.8 0.3 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein HemX PF04375.14 gi|300710516|ref|YP_003736330.1| - 0.015 14.6 0.2 0.027 13.7 0.2 1.4 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1654 PF07867.11 gi|300710516|ref|YP_003736330.1| - 0.12 12.1 0.2 0.12 12.1 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1654) Cytidylate_kin2 PF13189.6 gi|300710517|ref|YP_003736331.1| - 5.9e-20 72.1 1.6 7.8e-18 65.2 1.6 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|300710517|ref|YP_003736331.1| - 4.6e-17 62.8 0.1 5.8e-17 62.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|300710517|ref|YP_003736331.1| - 2.7e-15 57.0 0.1 6.9e-15 55.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|300710517|ref|YP_003736331.1| - 7.4e-12 45.5 1.4 4.7e-05 23.2 0.4 2.1 1 1 1 2 2 2 2 Cytidylate kinase AAA_33 PF13671.6 gi|300710517|ref|YP_003736331.1| - 3e-11 43.6 0.6 6.4e-10 39.3 0.6 2.0 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|300710517|ref|YP_003736331.1| - 2.4e-06 27.7 0.1 9.5e-06 25.8 0.0 1.8 1 1 0 2 2 2 1 Adenylate kinase SKI PF01202.22 gi|300710517|ref|YP_003736331.1| - 3.7e-06 27.2 0.9 7e-06 26.3 0.9 1.4 1 1 0 1 1 1 1 Shikimate kinase AAA_28 PF13521.6 gi|300710517|ref|YP_003736331.1| - 0.00012 22.4 0.6 0.00029 21.1 0.6 1.9 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|300710517|ref|YP_003736331.1| - 0.00081 19.3 0.1 0.4 10.5 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_16 PF13191.6 gi|300710517|ref|YP_003736331.1| - 0.0015 19.0 0.1 0.002 18.5 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain KTI12 PF08433.10 gi|300710517|ref|YP_003736331.1| - 0.016 14.7 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_30 PF13604.6 gi|300710517|ref|YP_003736331.1| - 0.025 14.3 2.0 0.11 12.3 0.1 2.4 1 1 2 3 3 3 0 AAA domain AAA_22 PF13401.6 gi|300710517|ref|YP_003736331.1| - 0.032 14.5 0.0 0.052 13.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|300710517|ref|YP_003736331.1| - 0.032 14.6 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 gi|300710517|ref|YP_003736331.1| - 0.034 13.8 0.2 4.3 7.0 0.1 2.3 2 1 0 2 2 2 0 Thymidylate kinase AAA_23 PF13476.6 gi|300710517|ref|YP_003736331.1| - 0.083 13.4 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|300710517|ref|YP_003736331.1| - 0.088 12.7 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 NACHT domain Rad17 PF03215.15 gi|300710517|ref|YP_003736331.1| - 0.1 12.5 0.0 0.19 11.6 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain CoaE PF01121.20 gi|300710517|ref|YP_003736331.1| - 0.1 12.3 1.2 5.1 6.7 0.0 2.1 1 1 1 2 2 2 0 Dephospho-CoA kinase NTPase_1 PF03266.15 gi|300710517|ref|YP_003736331.1| - 0.13 12.1 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 NTPase RNA_helicase PF00910.22 gi|300710517|ref|YP_003736331.1| - 0.14 12.6 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 RNA helicase ATP_bind_1 PF03029.17 gi|300710517|ref|YP_003736331.1| - 0.19 11.5 0.1 0.37 10.5 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RHH_1 PF01402.21 gi|300710517|ref|YP_003736331.1| - 0.83 9.7 9.0 6.9 6.8 0.0 2.9 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family TruB_N PF01509.18 gi|300710518|ref|YP_003736332.1| - 3.5e-24 85.9 0.2 3.6e-14 53.4 0.0 3.1 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|300710518|ref|YP_003736332.1| - 2.6e-21 75.5 1.4 3.2e-21 75.3 0.2 1.9 2 0 0 2 2 2 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|300710518|ref|YP_003736332.1| - 4.4e-09 36.3 0.0 9.2e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|300710518|ref|YP_003736332.1| - 1.8e-07 31.0 0.0 3.4e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 PUA domain Abhydrolase_1 PF00561.20 gi|300710519|ref|YP_003736333.1| - 1.4e-24 87.2 0.1 9.6e-23 81.1 0.1 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300710519|ref|YP_003736333.1| - 1.7e-20 74.6 10.2 2e-20 74.3 10.2 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300710519|ref|YP_003736333.1| - 2e-08 33.8 0.0 1.5e-07 30.9 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 gi|300710519|ref|YP_003736333.1| - 0.0011 18.7 0.2 0.044 13.4 0.2 2.2 1 1 0 1 1 1 1 Putative esterase FSH1 PF03959.13 gi|300710519|ref|YP_003736333.1| - 0.0041 16.8 0.0 0.0067 16.1 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Esterase_phd PF10503.9 gi|300710519|ref|YP_003736333.1| - 0.044 13.3 0.3 4.9 6.6 0.2 2.8 2 1 0 3 3 3 0 Esterase PHB depolymerase Peptidase_S9 PF00326.21 gi|300710519|ref|YP_003736333.1| - 0.047 13.2 0.0 0.12 11.8 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|300710519|ref|YP_003736333.1| - 0.18 11.4 0.0 0.38 10.3 0.0 1.5 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_4 PF08386.10 gi|300710519|ref|YP_003736333.1| - 0.19 11.9 0.0 0.35 11.0 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein HTH_10 PF04967.12 gi|300710520|ref|YP_003736334.1| - 1.1e-15 57.1 0.0 5.8e-15 54.8 0.0 2.2 3 0 0 3 3 3 1 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|300710520|ref|YP_003736334.1| - 0.053 13.2 0.6 0.43 10.3 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|300710520|ref|YP_003736334.1| - 0.081 12.5 0.1 0.081 12.5 0.1 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Tnp_4 PF13613.6 gi|300710520|ref|YP_003736334.1| - 0.18 11.6 0.0 0.39 10.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease DUF2070 PF09843.9 gi|300710521|ref|YP_003736335.1| - 0.88 7.8 11.6 1.1 7.5 11.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2238 PF09997.9 gi|300710522|ref|YP_003736336.1| - 0.00036 20.4 0.4 0.00074 19.3 0.4 1.6 1 0 0 1 1 1 1 Predicted membrane protein (DUF2238) DUF4079 PF13301.6 gi|300710522|ref|YP_003736336.1| - 4.2 7.5 7.3 0.55 10.4 3.2 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) YdjM PF04307.14 gi|300710523|ref|YP_003736337.1| - 4.5e-13 48.9 20.8 5.6e-12 45.3 20.1 2.6 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF2227 PF09988.9 gi|300710523|ref|YP_003736337.1| - 2.2 8.2 4.7 2.1 8.2 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) AstE_AspA PF04952.14 gi|300710524|ref|YP_003736338.1| - 2.9e-10 39.7 0.0 4.4e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Peptidase_M99 PF17033.5 gi|300710524|ref|YP_003736338.1| - 0.00028 20.4 0.0 0.00043 19.8 0.0 1.3 1 0 0 1 1 1 1 Carboxypeptidase controlling helical cell shape catalytic TAT_signal PF10518.9 gi|300710524|ref|YP_003736338.1| - 0.063 13.1 3.3 0.13 12.1 3.3 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence GFO_IDH_MocA PF01408.22 gi|300710525|ref|YP_003736339.1| - 3.2e-18 66.7 0.0 4.8e-18 66.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|300710525|ref|YP_003736339.1| - 0.0017 18.4 0.0 0.0032 17.5 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Hjc PF01870.18 gi|300710525|ref|YP_003736339.1| - 0.019 14.9 0.0 0.038 14.0 0.0 1.5 1 0 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) HTH_20 PF12840.7 gi|300710526|ref|YP_003736340.1| - 1.8e-08 34.3 1.3 4.6e-08 33.0 0.3 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300710526|ref|YP_003736340.1| - 7.7e-06 25.6 0.1 1.5e-05 24.7 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|300710526|ref|YP_003736340.1| - 0.006 16.4 0.0 0.0086 15.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300710526|ref|YP_003736340.1| - 0.011 15.6 0.1 0.022 14.7 0.1 1.5 1 0 0 1 1 1 0 MarR family FUR PF01475.19 gi|300710526|ref|YP_003736340.1| - 0.05 13.8 0.0 0.066 13.4 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family DUF2721 PF11026.8 gi|300710527|ref|YP_003736341.1| - 7.3 6.5 11.3 1.2 9.0 4.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) Na_H_Exchanger PF00999.21 gi|300710528|ref|YP_003736342.1| - 2.2e-45 155.1 52.7 3e-45 154.7 52.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Usp PF00582.26 gi|300710528|ref|YP_003736342.1| - 0.0029 18.1 0.6 0.0072 16.8 0.6 1.7 1 0 0 1 1 1 1 Universal stress protein family MmgE_PrpD PF03972.14 gi|300710528|ref|YP_003736342.1| - 0.29 9.6 2.0 0.48 8.9 2.0 1.2 1 0 0 1 1 1 0 MmgE/PrpD family Response_reg PF00072.24 gi|300710529|ref|YP_003736343.1| - 3.3e-20 72.3 0.0 4.5e-20 71.9 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain PAS_4 PF08448.10 gi|300710529|ref|YP_003736343.1| - 3.3e-06 27.3 0.0 1.2e-05 25.5 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_3 PF08447.12 gi|300710529|ref|YP_003736343.1| - 0.051 13.9 0.1 0.11 12.8 0.1 1.6 1 0 0 1 1 1 0 PAS fold OKR_DC_1_N PF03709.15 gi|300710529|ref|YP_003736343.1| - 0.065 13.5 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain PAS_9 PF13426.7 gi|300710529|ref|YP_003736343.1| - 0.15 12.3 0.0 0.32 11.2 0.0 1.6 1 0 0 1 1 1 0 PAS domain ILVD_EDD PF00920.21 gi|300710531|ref|YP_003736345.1| - 5.8e-199 662.0 6.7 6.6e-199 661.8 6.7 1.0 1 0 0 1 1 1 1 Dehydratase family DGC PF08859.11 gi|300710531|ref|YP_003736345.1| - 0.08 13.0 0.8 1.9 8.6 0.0 2.5 2 0 0 2 2 2 0 DGC domain Glyco_hydro_97 PF10566.9 gi|300710532|ref|YP_003736346.1| - 2.6e-89 299.2 0.1 4.3e-89 298.5 0.1 1.3 1 0 0 1 1 1 1 Glycoside hydrolase 97 GH97_N PF14508.6 gi|300710532|ref|YP_003736346.1| - 1.3e-60 204.8 0.0 2e-60 204.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl-hydrolase 97 N-terminal Glucodextran_C PF09985.9 gi|300710532|ref|YP_003736346.1| - 7.7e-53 179.3 0.0 1.6e-52 178.2 0.0 1.5 1 0 0 1 1 1 1 C-terminal binding-module, SLH-like, of glucodextranase GH97_C PF14509.6 gi|300710532|ref|YP_003736346.1| - 7.4e-31 106.2 0.0 3.3e-30 104.2 0.0 2.2 3 0 0 3 3 3 1 Glycosyl-hydrolase 97 C-terminal, oligomerisation CBM_6 PF03422.15 gi|300710532|ref|YP_003736346.1| - 0.0032 17.8 1.3 0.022 15.0 0.1 2.7 3 0 0 3 3 3 1 Carbohydrate binding module (family 6) CBM_35 PF16990.5 gi|300710532|ref|YP_003736346.1| - 0.039 14.2 0.0 0.12 12.7 0.0 1.8 1 1 0 1 1 1 0 Carbohydrate binding module (family 35) Sec_GG PF07549.14 gi|300710532|ref|YP_003736346.1| - 0.088 12.3 0.9 0.25 10.9 0.9 1.9 1 0 0 1 1 1 0 SecD/SecF GG Motif DUF2811 PF10929.8 gi|300710532|ref|YP_003736346.1| - 0.13 12.5 0.0 1.3 9.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2811) SBD_N PF07005.11 gi|300710533|ref|YP_003736347.1| - 5.3e-48 163.7 4.8 5.3e-48 163.7 4.8 1.7 2 0 0 2 2 2 1 Sugar-binding N-terminal domain NBD_C PF17042.5 gi|300710533|ref|YP_003736347.1| - 3.1e-26 92.9 5.8 3.1e-26 92.9 5.8 1.8 2 0 0 2 2 2 1 Nucleotide-binding C-terminal domain PdxA PF04166.12 gi|300710534|ref|YP_003736348.1| - 2.8e-99 332.1 0.1 3.3e-99 331.9 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Lar_N PF09861.9 gi|300710535|ref|YP_003736349.1| - 3.3e-06 26.4 0.0 4.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|300710535|ref|YP_003736349.1| - 0.0021 18.4 0.0 0.0032 17.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) DHDPS PF00701.22 gi|300710536|ref|YP_003736350.1| - 2.7e-58 197.0 0.0 3.1e-58 196.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family GntP_permease PF02447.16 gi|300710537|ref|YP_003736351.1| - 9.3e-93 311.3 32.5 1.1e-92 311.1 32.5 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 gi|300710537|ref|YP_003736351.1| - 3.2e-15 56.1 30.3 3.2e-15 56.1 30.3 1.5 2 0 0 2 2 2 1 Citrate transporter IlvN PF07991.12 gi|300710538|ref|YP_003736352.1| - 9.6e-58 194.4 0.0 1.3e-57 194.0 0.0 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|300710538|ref|YP_003736352.1| - 2.6e-23 82.9 0.2 4.1e-23 82.3 0.2 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|300710538|ref|YP_003736352.1| - 1.1e-07 32.4 0.1 3.3e-07 30.8 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|300710538|ref|YP_003736352.1| - 1.3e-06 28.7 0.0 2.7e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|300710538|ref|YP_003736352.1| - 6.4e-06 25.6 0.0 1.1e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|300710538|ref|YP_003736352.1| - 0.022 14.8 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Usp PF00582.26 gi|300710539|ref|YP_003736353.1| - 6.9e-40 136.8 1.0 7.8e-40 136.6 1.0 1.0 1 0 0 1 1 1 1 Universal stress protein family GAF_2 PF13185.6 gi|300710539|ref|YP_003736353.1| - 0.0047 17.2 0.2 0.0068 16.7 0.2 1.3 1 0 0 1 1 1 1 GAF domain DNA_photolyase PF00875.18 gi|300710539|ref|YP_003736353.1| - 0.018 15.1 0.0 0.07 13.1 0.0 1.9 1 1 0 1 1 1 0 DNA photolyase baeRF_family10 PF18854.1 gi|300710539|ref|YP_003736353.1| - 0.095 12.9 2.4 0.22 11.7 1.5 2.0 1 1 1 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 GHMP_kinases_N PF00288.26 gi|300710540|ref|YP_003736354.1| - 1.3e-05 25.3 0.1 2.6e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|300710540|ref|YP_003736354.1| - 0.0023 18.3 0.1 0.0048 17.2 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal zf-C2H2_6 PF13912.6 gi|300710541|ref|YP_003736355.1| - 1.5e-06 28.0 0.2 1.8e-06 27.8 0.2 1.1 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 gi|300710541|ref|YP_003736355.1| - 5.8e-05 23.3 0.8 9.7e-05 22.5 0.8 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 gi|300710541|ref|YP_003736355.1| - 0.00018 21.8 0.1 0.00022 21.5 0.1 1.2 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|300710541|ref|YP_003736355.1| - 0.00074 20.1 0.1 0.00097 19.8 0.1 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger Actin_micro PF17003.5 gi|300710541|ref|YP_003736355.1| - 0.0012 18.1 0.8 0.0012 18.1 0.8 1.0 1 0 0 1 1 1 1 Putative actin-like family zf-met PF12874.7 gi|300710541|ref|YP_003736355.1| - 0.0038 17.6 0.3 0.0064 16.8 0.3 1.3 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 gi|300710541|ref|YP_003736355.1| - 0.016 15.5 0.6 0.018 15.4 0.6 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 gi|300710541|ref|YP_003736355.1| - 0.017 15.4 0.6 0.019 15.3 0.6 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf_C2H2_ZHX PF18387.1 gi|300710541|ref|YP_003736355.1| - 0.043 13.5 0.1 0.048 13.3 0.1 1.1 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-C2H2_8 PF15909.5 gi|300710541|ref|YP_003736355.1| - 0.069 13.5 0.0 0.069 13.5 0.0 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon TFIIS_C PF01096.18 gi|300710542|ref|YP_003736356.1| - 8.5e-17 60.7 3.6 8.5e-17 60.7 3.6 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|300710542|ref|YP_003736356.1| - 4.4e-09 36.0 9.2 2e-07 30.8 1.4 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit OrfB_Zn_ribbon PF07282.11 gi|300710542|ref|YP_003736356.1| - 1.7e-06 27.9 11.5 0.00013 21.8 1.4 3.0 2 1 1 3 3 3 2 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.7 gi|300710542|ref|YP_003736356.1| - 2.2e-06 27.6 5.8 0.0017 18.3 1.0 2.5 2 0 0 2 2 2 2 Transposase zinc-ribbon domain DZR PF12773.7 gi|300710542|ref|YP_003736356.1| - 0.00012 22.1 10.1 0.0026 17.8 0.9 2.8 2 1 0 2 2 2 2 Double zinc ribbon Prok-RING_1 PF14446.6 gi|300710542|ref|YP_003736356.1| - 0.00017 21.5 5.9 0.0047 16.8 0.9 2.8 3 0 0 3 3 3 1 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|300710542|ref|YP_003736356.1| - 0.00021 20.6 13.1 0.0049 16.2 1.3 3.3 3 0 0 3 3 3 2 zinc-ribbon domain zf-ACC PF17848.1 gi|300710542|ref|YP_003736356.1| - 0.0021 18.1 12.6 1.1 9.4 0.2 4.2 4 0 0 4 4 4 1 Acetyl-coA carboxylase zinc finger domain TackOD1 PF18551.1 gi|300710542|ref|YP_003736356.1| - 0.0021 17.7 2.7 0.65 9.6 0.5 2.2 1 1 1 2 2 2 2 Thaumarchaeal output domain 1 Ribosomal_S27 PF01599.19 gi|300710542|ref|YP_003736356.1| - 0.0022 18.1 2.4 0.0022 18.1 2.4 2.4 3 0 0 3 3 2 1 Ribosomal protein S27a HypA PF01155.19 gi|300710542|ref|YP_003736356.1| - 0.0056 16.7 9.0 0.39 10.7 1.4 2.7 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|300710542|ref|YP_003736356.1| - 0.0082 15.8 9.5 0.25 11.1 0.2 4.0 4 0 0 4 4 4 1 DNA directed RNA polymerase, 7 kDa subunit Rubredoxin_2 PF18073.1 gi|300710542|ref|YP_003736356.1| - 0.011 15.4 15.9 3.2 7.6 1.1 4.3 4 0 0 4 4 4 0 Rubredoxin metal binding domain Lar_restr_allev PF14354.6 gi|300710542|ref|YP_003736356.1| - 0.046 14.1 12.8 0.11 12.8 2.0 3.6 1 1 2 3 3 3 0 Restriction alleviation protein Lar zf-RING_7 PF02591.15 gi|300710542|ref|YP_003736356.1| - 0.046 13.9 7.5 3.8 7.8 0.1 3.8 4 0 0 4 4 4 0 C4-type zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|300710542|ref|YP_003736356.1| - 0.071 12.9 2.2 0.071 12.9 2.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|300710542|ref|YP_003736356.1| - 0.092 12.4 14.0 1 9.0 0.2 4.1 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Nudix_N_2 PF14803.6 gi|300710542|ref|YP_003736356.1| - 0.14 12.1 13.8 0.21 11.5 3.2 3.9 2 2 1 3 3 3 0 Nudix N-terminal A2L_zn_ribbon PF08792.10 gi|300710542|ref|YP_003736356.1| - 0.15 11.9 12.1 10 6.0 0.0 4.1 3 1 0 4 4 4 0 A2L zinc ribbon domain zf-ISL3 PF14690.6 gi|300710542|ref|YP_003736356.1| - 0.16 12.6 11.0 4.7 8.0 0.2 4.0 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-NADH-PPase PF09297.11 gi|300710542|ref|YP_003736356.1| - 0.26 11.0 14.0 0.1 12.3 3.5 3.8 3 1 1 4 4 4 0 NADH pyrophosphatase zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|300710542|ref|YP_003736356.1| - 0.26 11.3 9.7 0.23 11.4 0.8 2.5 2 1 0 2 2 2 0 zinc-ribbons zf-RRN7 PF11781.8 gi|300710542|ref|YP_003736356.1| - 0.29 10.9 10.4 6.5 6.5 0.2 4.1 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PhnA_Zn_Ribbon PF08274.12 gi|300710542|ref|YP_003736356.1| - 0.33 11.0 10.1 2.1 8.4 0.8 3.5 2 2 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 gi|300710542|ref|YP_003736356.1| - 0.46 10.3 18.4 5.7 6.8 0.1 4.1 3 1 0 3 3 3 0 zinc-ribbon domain YhfH PF14149.6 gi|300710542|ref|YP_003736356.1| - 0.47 10.5 11.3 7.3 6.7 0.3 4.3 4 0 0 4 4 4 0 YhfH-like protein Zn_ribbon_recom PF13408.6 gi|300710542|ref|YP_003736356.1| - 0.56 10.8 11.6 94 3.6 0.1 3.9 3 1 1 4 4 4 0 Recombinase zinc beta ribbon domain TF_Zn_Ribbon PF08271.12 gi|300710542|ref|YP_003736356.1| - 0.63 9.6 20.2 3.7 7.1 5.3 4.3 3 2 1 4 4 4 0 TFIIB zinc-binding zf-H2C2_2 PF13465.6 gi|300710542|ref|YP_003736356.1| - 0.67 10.5 8.0 3.1 8.4 0.4 3.8 4 0 0 4 4 4 0 Zinc-finger double domain GFA PF04828.14 gi|300710542|ref|YP_003736356.1| - 0.78 10.1 11.6 16 5.9 0.2 3.9 1 1 2 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme ADK_lid PF05191.14 gi|300710542|ref|YP_003736356.1| - 0.81 9.7 14.3 2.2 8.4 0.7 3.8 3 1 1 4 4 4 0 Adenylate kinase, active site lid Jiv90 PF14901.6 gi|300710542|ref|YP_003736356.1| - 0.98 9.6 4.8 3.6 7.8 0.6 2.6 2 1 0 2 2 2 0 Cleavage inducing molecular chaperone Zn-ribbon_8 PF09723.10 gi|300710542|ref|YP_003736356.1| - 1.1 9.5 19.6 8.7 6.6 0.6 4.2 2 2 0 3 3 3 0 Zinc ribbon domain FYVE_2 PF02318.16 gi|300710542|ref|YP_003736356.1| - 1.4 9.2 5.2 1.4 9.1 0.3 2.2 2 1 0 2 2 2 0 FYVE-type zinc finger DUF1677 PF07911.13 gi|300710542|ref|YP_003736356.1| - 1.5 9.2 7.0 0.31 11.4 0.3 2.4 3 0 0 3 3 2 0 Protein of unknown function (DUF1677) zf-IS66 PF13005.7 gi|300710542|ref|YP_003736356.1| - 1.9 8.9 12.3 1.9 8.9 0.2 4.0 3 1 1 4 4 4 0 zinc-finger binding domain of transposase IS66 C1_1 PF00130.22 gi|300710542|ref|YP_003736356.1| - 2.1 8.3 9.5 4.5 7.2 1.2 2.8 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HalOD2 PF18547.1 gi|300710542|ref|YP_003736356.1| - 2.4 8.1 14.1 3.2 7.7 1.1 3.7 3 1 1 4 4 4 0 Halobacterial output domain 2 zinc_ribbon_4 PF13717.6 gi|300710542|ref|YP_003736356.1| - 2.9 7.9 12.2 7 6.7 0.3 3.7 4 0 0 4 4 4 0 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 gi|300710542|ref|YP_003736356.1| - 3.1 7.7 5.6 0.51 10.2 0.3 2.1 2 0 0 2 2 2 0 Domain found in IF2B/IF5 Rubredoxin PF00301.20 gi|300710542|ref|YP_003736356.1| - 3.7 7.6 16.1 10 6.2 0.1 4.1 3 1 1 4 4 4 0 Rubredoxin zf-C2H2 PF00096.26 gi|300710542|ref|YP_003736356.1| - 4.7 7.9 10.5 27 5.5 0.5 4.0 4 0 0 4 4 4 0 Zinc finger, C2H2 type UPF0547 PF10571.9 gi|300710542|ref|YP_003736356.1| - 6.2 7.0 19.5 0.47 10.6 0.8 3.6 4 0 0 4 4 3 0 Uncharacterised protein family UPF0547 zf-Mss51 PF13824.6 gi|300710542|ref|YP_003736356.1| - 8.3 6.6 14.1 30 4.8 0.4 3.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF3725 PF12523.8 gi|300710542|ref|YP_003736356.1| - 9.7 6.6 6.9 8.7 6.7 0.4 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3725) zf_UBZ PF18439.1 gi|300710543|ref|YP_003736357.1| - 0.041 13.5 1.2 0.082 12.5 0.0 1.9 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ACC PF17848.1 gi|300710543|ref|YP_003736357.1| - 0.048 13.8 0.8 6.8 6.9 0.1 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-Mss51 PF13824.6 gi|300710543|ref|YP_003736357.1| - 0.15 12.2 1.4 10 6.3 0.0 2.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 TF_Zn_Ribbon PF08271.12 gi|300710543|ref|YP_003736357.1| - 0.16 11.5 5.0 0.32 10.6 0.3 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding PEPcase PF00311.17 gi|300710544|ref|YP_003736358.1| - 7.2e-236 785.1 0.0 1.3e-235 784.2 0.0 1.4 1 1 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.6 gi|300710544|ref|YP_003736358.1| - 5.3e-05 21.9 0.0 9.4e-05 21.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Amino_oxidase PF01593.24 gi|300710545|ref|YP_003736359.1| - 1.9e-28 99.9 0.2 6.6e-28 98.2 0.2 1.7 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|300710545|ref|YP_003736359.1| - 2.5e-15 56.5 0.1 5.9e-15 55.2 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300710545|ref|YP_003736359.1| - 7.1e-08 32.4 1.0 7.7e-07 29.0 0.1 2.6 2 2 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|300710545|ref|YP_003736359.1| - 1.4e-07 31.9 2.1 2.2e-05 24.9 0.5 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300710545|ref|YP_003736359.1| - 1.3e-05 24.5 0.9 2e-05 23.9 0.9 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300710545|ref|YP_003736359.1| - 1.7e-05 24.2 0.8 4.2e-05 22.9 0.2 1.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|300710545|ref|YP_003736359.1| - 0.00023 20.6 0.0 0.00032 20.2 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|300710545|ref|YP_003736359.1| - 0.0024 17.2 0.3 0.0035 16.6 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|300710545|ref|YP_003736359.1| - 0.0054 16.0 0.2 0.0094 15.2 0.2 1.2 1 0 0 1 1 1 1 Thi4 family HI0933_like PF03486.14 gi|300710545|ref|YP_003736359.1| - 0.021 13.5 0.3 0.12 11.0 0.5 2.0 3 0 0 3 3 3 0 HI0933-like protein Pyr_redox_3 PF13738.6 gi|300710545|ref|YP_003736359.1| - 0.043 13.1 0.0 0.22 10.8 0.1 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 gi|300710545|ref|YP_003736359.1| - 0.11 12.0 0.1 0.19 11.3 0.1 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain ApbA PF02558.16 gi|300710545|ref|YP_003736359.1| - 0.17 11.5 0.1 0.28 10.8 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 gi|300710545|ref|YP_003736359.1| - 0.17 11.5 0.5 0.31 10.6 0.5 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|300710545|ref|YP_003736359.1| - 0.2 12.1 0.0 0.35 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding GIDA PF01134.22 gi|300710545|ref|YP_003736359.1| - 0.24 10.4 0.5 0.41 9.7 0.5 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|300710545|ref|YP_003736359.1| - 0.27 11.2 0.6 1.7 8.6 0.2 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|300710545|ref|YP_003736359.1| - 0.31 10.9 0.3 0.49 10.3 0.3 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UbiA PF01040.18 gi|300710546|ref|YP_003736360.1| - 2.8e-26 92.3 20.9 5.3e-26 91.4 20.9 1.5 1 1 0 1 1 1 1 UbiA prenyltransferase family E1-E2_ATPase PF00122.20 gi|300710547|ref|YP_003736361.1| - 1.2e-54 184.6 1.5 2.7e-54 183.5 1.5 1.6 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|300710547|ref|YP_003736361.1| - 1.9e-47 162.3 2.8 3.5e-47 161.4 2.8 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|300710547|ref|YP_003736361.1| - 2.3e-13 50.3 0.2 9.1e-12 45.3 0.0 3.2 3 0 0 3 3 3 1 Heavy-metal-associated domain HAD PF12710.7 gi|300710547|ref|YP_003736361.1| - 6.6e-05 23.4 0.1 0.00034 21.1 0.1 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|300710547|ref|YP_003736361.1| - 0.0043 16.8 1.3 0.0081 15.9 0.8 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Glyco_tran_WecB PF03808.13 gi|300710547|ref|YP_003736361.1| - 0.14 12.1 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family Big_1 PF02369.16 gi|300710548|ref|YP_003736362.1| - 4.3e-11 42.6 1.3 1.8e-05 24.6 0.0 3.2 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 gi|300710548|ref|YP_003736362.1| - 3.4e-09 36.8 6.6 0.00052 20.2 0.3 2.3 2 0 0 2 2 2 2 Carboxypeptidase regulatory-like domain Invasin_D3 PF09134.10 gi|300710548|ref|YP_003736362.1| - 1.1e-08 35.2 3.2 0.0013 19.0 0.3 2.8 2 2 0 2 2 2 2 Invasin, domain 3 YtkA PF13115.6 gi|300710548|ref|YP_003736362.1| - 9.6e-07 29.3 4.2 1.6e-05 25.4 0.9 2.8 3 0 0 3 3 3 1 YtkA-like Big_3_5 PF16640.5 gi|300710548|ref|YP_003736362.1| - 0.0034 17.5 3.4 0.024 14.8 0.0 3.4 1 1 2 3 3 3 1 Bacterial Ig-like domain (group 3) bMG3 PF11974.8 gi|300710548|ref|YP_003736362.1| - 0.0041 17.1 0.2 0.012 15.7 0.1 1.8 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain GH43_C PF16369.5 gi|300710548|ref|YP_003736362.1| - 0.013 16.1 1.1 0.3 11.7 0.4 2.5 2 1 0 2 2 2 0 C-terminal lipocalin-like domain Dioxygenase_C PF00775.21 gi|300710548|ref|YP_003736362.1| - 0.027 13.9 1.7 3.7 6.9 0.2 2.6 1 1 1 2 2 2 0 Dioxygenase DUF4198 PF10670.9 gi|300710548|ref|YP_003736362.1| - 0.045 14.1 1.4 4.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4198) TAT_signal PF10518.9 gi|300710548|ref|YP_003736362.1| - 0.051 13.4 1.5 0.097 12.6 1.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Transthyretin PF00576.21 gi|300710548|ref|YP_003736362.1| - 0.064 14.0 0.0 0.25 12.0 0.0 1.9 2 1 0 2 2 2 0 HIUase/Transthyretin family SpaA PF17802.1 gi|300710548|ref|YP_003736362.1| - 0.24 11.8 3.1 2.3 8.6 0.2 3.0 2 2 0 2 2 2 0 Prealbumin-like fold domain Cadherin-like PF12733.7 gi|300710548|ref|YP_003736362.1| - 3.7 8.1 7.6 14 6.3 0.1 3.3 2 2 0 3 3 3 0 Cadherin-like beta sandwich domain Sigma70_r3 PF04539.16 gi|300710550|ref|YP_003736364.1| - 0.0045 17.0 0.1 0.017 15.2 0.0 1.9 2 0 0 2 2 2 1 Sigma-70 region 3 KCT2 PF17818.1 gi|300710550|ref|YP_003736364.1| - 0.027 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Keratinocyte-associated gene product Fic PF02661.18 gi|300710552|ref|YP_003736366.1| - 1.9e-12 47.9 0.1 8.1e-12 45.9 0.0 2.0 2 1 0 2 2 2 1 Fic/DOC family FtsK_gamma PF09397.10 gi|300710552|ref|YP_003736366.1| - 0.035 13.9 0.1 0.089 12.6 0.1 1.6 1 0 0 1 1 1 0 Ftsk gamma domain HTH_24 PF13412.6 gi|300710552|ref|YP_003736366.1| - 0.039 13.5 0.0 0.084 12.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|300710552|ref|YP_003736366.1| - 0.08 12.8 0.0 0.3 11.0 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DDE_Tnp_1 PF01609.21 gi|300710554|ref|YP_003736368.1| - 1.2e-09 38.2 0.1 2.9e-09 36.9 0.1 1.7 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 gi|300710554|ref|YP_003736368.1| - 9.6e-06 24.1 0.3 0.00011 20.6 0.1 2.4 2 1 0 2 2 2 1 Transposase DDE domain group 1 DUF772 PF05598.11 gi|300710554|ref|YP_003736368.1| - 0.00018 21.5 0.0 0.00041 20.3 0.0 1.6 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1_7 PF13843.6 gi|300710554|ref|YP_003736368.1| - 0.0079 15.5 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Transposase IS4 DDE_5 PF13546.6 gi|300710554|ref|YP_003736368.1| - 0.015 14.7 0.0 0.033 13.5 0.0 1.6 1 0 0 1 1 1 0 DDE superfamily endonuclease Caroten_synth PF04240.12 gi|300710555|ref|YP_003736369.1| - 1e-58 198.7 17.5 1.4e-58 198.3 17.5 1.1 1 0 0 1 1 1 1 Carotenoid biosynthesis protein MscS_TM PF12794.7 gi|300710555|ref|YP_003736369.1| - 0.0047 15.8 1.3 0.0085 15.0 1.3 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel inner membrane domain 1 SQS_PSY PF00494.19 gi|300710556|ref|YP_003736370.1| - 2.1e-62 211.0 5.9 2.6e-62 210.7 5.9 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase PEP_mutase PF13714.6 gi|300710557|ref|YP_003736371.1| - 4.4e-41 140.9 0.0 6.2e-41 140.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|300710557|ref|YP_003736371.1| - 2.3e-30 105.6 1.5 2.1e-14 53.0 0.0 2.2 1 1 1 2 2 2 2 Isocitrate lyase family Virulence_fact PF13769.6 gi|300710557|ref|YP_003736371.1| - 0.16 12.2 1.5 0.3 11.3 0.2 2.1 2 1 0 2 2 2 0 Virulence factor Saccharop_dh_N PF04455.12 gi|300710559|ref|YP_003736373.1| - 7e-35 119.4 0.0 1.4e-34 118.5 0.0 1.5 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region TPP_enzyme_M PF00205.22 gi|300710559|ref|YP_003736373.1| - 1.9e-05 24.4 0.2 0.0033 17.1 0.1 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, central domain DS PF01916.17 gi|300710559|ref|YP_003736373.1| - 0.0042 16.4 0.1 0.24 10.6 0.0 2.2 1 1 1 2 2 2 2 Deoxyhypusine synthase Na_Ca_ex PF01699.24 gi|300710560|ref|YP_003736374.1| - 4.6e-42 143.5 35.4 5.9e-21 75.0 11.0 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein SRAP PF02586.14 gi|300710561|ref|YP_003736375.1| - 2.5e-55 187.4 0.0 3e-55 187.1 0.0 1.1 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) HAD_2 PF13419.6 gi|300710562|ref|YP_003736376.1| - 1.6e-17 64.1 0.0 2e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710562|ref|YP_003736376.1| - 3.6e-07 30.1 0.0 7.9e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|300710562|ref|YP_003736376.1| - 4.7e-07 30.3 0.0 5.7e-05 23.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300710562|ref|YP_003736376.1| - 0.0016 18.9 0.2 0.0024 18.3 0.2 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|300710562|ref|YP_003736376.1| - 0.24 10.7 0.0 20 4.5 0.0 2.3 2 0 0 2 2 2 0 Putative Phosphatase FAA_hydrolase PF01557.18 gi|300710563|ref|YP_003736377.1| - 6.3e-47 160.0 0.0 7.4e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Abhydrolase_6 PF12697.7 gi|300710564|ref|YP_003736378.1| - 1.7e-23 84.4 6.2 1.9e-23 84.2 6.2 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300710564|ref|YP_003736378.1| - 1.8e-22 80.2 0.0 2.8e-21 76.3 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|300710564|ref|YP_003736378.1| - 9.4e-15 54.5 0.0 1.3e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|300710564|ref|YP_003736378.1| - 0.001 17.8 0.0 0.0016 17.2 0.0 1.2 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 gi|300710564|ref|YP_003736378.1| - 0.1 12.4 0.0 0.71 9.7 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase Isochorismatase PF00857.20 gi|300710564|ref|YP_003736378.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 Isochorismatase family Abhydrolase_5 PF12695.7 gi|300710564|ref|YP_003736378.1| - 0.23 11.2 0.0 0.36 10.6 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Hexapep PF00132.24 gi|300710565|ref|YP_003736379.1| - 5.3e-14 51.3 8.3 5.9e-05 22.6 0.8 3.6 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300710565|ref|YP_003736379.1| - 5.9e-05 22.7 6.0 0.13 12.0 2.0 2.7 1 1 1 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|300710565|ref|YP_003736379.1| - 0.0059 15.6 0.0 0.014 14.3 0.0 1.6 1 1 0 1 1 1 1 L-fucokinase Bactofilin PF04519.13 gi|300710565|ref|YP_003736379.1| - 0.24 11.7 4.9 0.45 10.8 4.8 1.5 1 1 0 1 1 1 0 Polymer-forming cytoskeletal B_solenoid_ydck PF18836.1 gi|300710565|ref|YP_003736379.1| - 3.5 7.7 5.6 8 6.5 0.3 3.7 4 0 0 4 4 4 0 Beta solenoid repeat from YDCK Asn_synthase PF00733.21 gi|300710566|ref|YP_003736380.1| - 2.9e-12 46.9 0.9 3.8e-11 43.2 0.9 2.8 1 1 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|300710566|ref|YP_003736380.1| - 6.5e-08 32.5 0.0 1.3e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|300710566|ref|YP_003736380.1| - 7.8e-05 22.9 0.1 0.0003 21.0 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain MMR_HSR1_C PF08438.10 gi|300710567|ref|YP_003736381.1| - 4.5e-28 98.1 0.0 7.5e-28 97.3 0.0 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|300710567|ref|YP_003736381.1| - 3.9e-20 72.0 0.0 1.3e-18 67.1 0.0 2.6 3 0 0 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|300710567|ref|YP_003736381.1| - 1.8e-07 31.1 0.0 3.9e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|300710567|ref|YP_003736381.1| - 6.1e-06 25.8 0.0 0.00021 20.9 0.0 2.5 3 0 0 3 3 3 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|300710567|ref|YP_003736381.1| - 0.038 13.5 0.0 0.1 12.1 0.0 1.7 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain MeaB PF03308.16 gi|300710567|ref|YP_003736381.1| - 0.069 12.1 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PAG PF15347.6 gi|300710567|ref|YP_003736381.1| - 0.074 12.1 0.2 0.11 11.5 0.2 1.1 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched Dynamin_N PF00350.23 gi|300710567|ref|YP_003736381.1| - 0.2 11.7 0.2 1 9.4 0.0 2.1 3 0 0 3 3 3 0 Dynamin family HypA PF01155.19 gi|300710568|ref|YP_003736382.1| - 0.0025 17.8 0.3 0.0025 17.8 0.3 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|300710568|ref|YP_003736382.1| - 0.0033 17.5 1.5 0.008 16.3 1.5 1.6 1 1 0 1 1 1 1 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300710568|ref|YP_003736382.1| - 0.022 14.1 1.6 0.18 11.3 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|300710568|ref|YP_003736382.1| - 0.024 14.3 1.5 4.5 7.1 0.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain PADR1 PF08063.12 gi|300710568|ref|YP_003736382.1| - 0.035 13.9 0.4 0.1 12.4 0.1 1.8 2 0 0 2 2 2 0 PADR1 (NUC008) domain zf-C2H2_3 PF13878.6 gi|300710568|ref|YP_003736382.1| - 0.043 13.6 2.0 5.7 6.8 0.7 2.2 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO TF_Zn_Ribbon PF08271.12 gi|300710568|ref|YP_003736382.1| - 0.045 13.3 3.5 0.17 11.4 0.7 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|300710568|ref|YP_003736382.1| - 0.083 12.6 5.5 1.4 8.7 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain TFIIS_C PF01096.18 gi|300710568|ref|YP_003736382.1| - 0.16 11.8 2.8 1.6 8.6 0.4 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) CBS PF00571.28 gi|300710570|ref|YP_003736384.1| - 1.3e-30 105.6 5.3 2.3e-15 56.8 1.9 2.2 2 0 0 2 2 2 2 CBS domain GCV_T_C PF08669.11 gi|300710570|ref|YP_003736384.1| - 0.13 12.2 0.0 0.92 9.5 0.0 2.1 2 0 0 2 2 2 0 Glycine cleavage T-protein C-terminal barrel domain Vps55 PF04133.14 gi|300710571|ref|YP_003736385.1| - 1.3 9.0 10.1 0.5 10.3 3.8 2.7 1 1 1 2 2 2 0 Vacuolar protein sorting 55 NAD_synthase PF02540.17 gi|300710572|ref|YP_003736386.1| - 2e-74 249.8 0.0 2.4e-74 249.5 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|300710572|ref|YP_003736386.1| - 3.8e-07 29.2 0.0 0.00021 20.2 0.0 2.3 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|300710572|ref|YP_003736386.1| - 2.3e-06 27.5 0.0 4.5e-06 26.6 0.0 1.5 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.13 gi|300710572|ref|YP_003736386.1| - 6.5e-05 22.5 0.0 0.00032 20.2 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC LPD22 PF18834.1 gi|300710572|ref|YP_003736386.1| - 0.15 12.3 0.2 20 5.5 0.0 3.0 3 0 0 3 3 3 0 Large polyvalent protein associated domain 22 Pribosyltran PF00156.27 gi|300710574|ref|YP_003736388.1| - 5.3e-15 55.3 0.7 7e-15 54.9 0.7 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300710574|ref|YP_003736388.1| - 0.0028 17.1 0.0 0.0042 16.5 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|300710574|ref|YP_003736388.1| - 0.049 13.1 0.1 0.067 12.7 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase HTH_10 PF04967.12 gi|300710575|ref|YP_003736389.1| - 1.7e-16 59.7 0.1 2.5e-16 59.2 0.1 1.3 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300710575|ref|YP_003736389.1| - 2.2e-14 53.6 1.8 3.5e-14 53.0 1.8 1.4 1 0 0 1 1 1 1 GAF and HTH_10 associated domain Sigma70_r4 PF04545.16 gi|300710575|ref|YP_003736389.1| - 0.00038 19.9 0.5 0.0017 17.8 0.2 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|300710575|ref|YP_003736389.1| - 0.0014 18.5 0.4 0.029 14.2 0.1 2.3 2 0 0 2 2 2 1 MarR family Sigma70_r4_2 PF08281.12 gi|300710575|ref|YP_003736389.1| - 0.0027 17.3 0.1 0.013 15.1 0.1 2.0 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|300710575|ref|YP_003736389.1| - 0.0033 17.2 0.0 0.12 12.2 0.0 2.3 2 0 0 2 2 2 1 Homeodomain-like domain HTH_24 PF13412.6 gi|300710575|ref|YP_003736389.1| - 0.0088 15.6 0.1 0.024 14.2 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.6 gi|300710575|ref|YP_003736389.1| - 0.014 15.5 0.1 0.065 13.4 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|300710575|ref|YP_003736389.1| - 0.027 14.3 0.5 0.071 13.0 0.5 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Sigma70_r3 PF04539.16 gi|300710575|ref|YP_003736389.1| - 0.04 14.0 0.1 0.075 13.1 0.1 1.5 1 0 0 1 1 1 0 Sigma-70 region 3 HTH_8 PF02954.19 gi|300710575|ref|YP_003736389.1| - 0.062 13.1 0.1 0.22 11.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family AbiEi_4 PF13338.6 gi|300710575|ref|YP_003736389.1| - 0.079 13.1 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DS PF01916.17 gi|300710576|ref|YP_003736390.1| - 1e-91 307.2 0.0 2e-91 306.3 0.0 1.4 1 1 0 1 1 1 1 Deoxyhypusine synthase NIF3 PF01784.18 gi|300710577|ref|YP_003736391.1| - 3.4e-51 174.3 0.0 4.2e-51 174.0 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) AP_endonuc_2 PF01261.24 gi|300710577|ref|YP_003736391.1| - 0.0099 15.3 0.2 0.071 12.5 0.0 2.2 2 1 0 2 2 2 1 Xylose isomerase-like TIM barrel PEP_hydrolase PF09370.10 gi|300710577|ref|YP_003736391.1| - 0.076 12.2 0.1 0.12 11.6 0.1 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate hydrolase-like Glyoxalase_4 PF13669.6 gi|300710577|ref|YP_003736391.1| - 0.081 13.2 0.9 0.29 11.4 0.1 2.2 2 1 1 3 3 3 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily URO-D PF01208.17 gi|300710577|ref|YP_003736391.1| - 0.18 10.9 0.0 17 4.5 0.0 2.1 2 0 0 2 2 2 0 Uroporphyrinogen decarboxylase (URO-D) Glyoxalase_6 PF18029.1 gi|300710577|ref|YP_003736391.1| - 0.52 11.1 0.1 0.52 11.1 0.1 2.3 3 0 0 3 3 3 0 Glyoxalase-like domain Arginase PF00491.21 gi|300710578|ref|YP_003736392.1| - 1.2e-54 185.8 0.4 1.3e-54 185.6 0.4 1.0 1 0 0 1 1 1 1 Arginase family eIF-5a PF01287.20 gi|300710579|ref|YP_003736393.1| - 0.0014 18.7 0.7 0.0021 18.1 0.2 1.6 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|300710579|ref|YP_003736393.1| - 0.024 14.7 0.1 0.084 12.9 0.0 1.8 2 0 0 2 2 2 0 Elongation factor P (EF-P) KOW-like domain Aminotran_1_2 PF00155.21 gi|300710580|ref|YP_003736394.1| - 9.3e-48 163.2 0.0 1.1e-47 162.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|300710580|ref|YP_003736394.1| - 9.7e-10 37.9 0.0 1.3e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|300710580|ref|YP_003736394.1| - 2.6e-06 26.2 0.0 3.6e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|300710580|ref|YP_003736394.1| - 0.0034 16.7 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|300710580|ref|YP_003736394.1| - 0.13 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Acetyltransf_10 PF13673.7 gi|300710581|ref|YP_003736395.1| - 5.9e-13 48.9 0.0 8.7e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300710581|ref|YP_003736395.1| - 1.1e-11 45.0 0.1 1.3e-11 44.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300710581|ref|YP_003736395.1| - 1.4e-10 41.4 0.2 3.9e-10 40.0 0.1 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300710581|ref|YP_003736395.1| - 1e-08 35.3 0.0 2e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300710581|ref|YP_003736395.1| - 0.00011 22.1 0.2 0.0037 17.2 0.0 2.3 1 1 1 2 2 2 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 gi|300710581|ref|YP_003736395.1| - 0.0011 18.5 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase 2 Acetyltransf_CG PF14542.6 gi|300710581|ref|YP_003736395.1| - 0.037 14.2 0.1 0.089 12.9 0.0 1.7 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase Acetyltransf_16 PF05301.11 gi|300710581|ref|YP_003736395.1| - 0.056 13.2 0.0 0.88 9.3 0.0 2.0 2 0 0 2 2 2 0 GNAT acetyltransferase, Mec-17 ABC1 PF03109.16 gi|300710582|ref|YP_003736396.1| - 1.6e-26 92.8 0.0 4.6e-26 91.3 0.0 1.7 1 0 0 1 1 1 1 ABC1 family Pkinase PF00069.25 gi|300710582|ref|YP_003736396.1| - 0.00085 18.8 0.0 0.0018 17.7 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain APH PF01636.23 gi|300710582|ref|YP_003736396.1| - 0.0055 16.7 0.3 0.075 12.9 0.3 2.4 1 1 1 2 2 2 1 Phosphotransferase enzyme family HSP20 PF00011.21 gi|300710583|ref|YP_003736397.1| - 2.9e-10 40.2 0.0 3.4e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|300710583|ref|YP_003736397.1| - 0.11 12.0 0.1 0.26 10.9 0.1 1.7 1 1 0 1 1 1 0 HSP20-like domain found in ArsA GIDE PF12483.8 gi|300710584|ref|YP_003736398.1| - 5.4e-11 42.1 0.0 2.2e-10 40.1 0.0 1.8 1 1 0 1 1 1 1 E3 Ubiquitin ligase MoeA_N PF03453.17 gi|300710585|ref|YP_003736399.1| - 2.9e-41 140.8 3.0 4.7e-41 140.2 3.0 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|300710585|ref|YP_003736399.1| - 1.1e-23 83.5 0.1 2e-23 82.7 0.1 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|300710585|ref|YP_003736399.1| - 9.9e-20 70.5 0.1 9.9e-20 70.5 0.1 2.9 3 1 0 3 3 3 1 MoeA C-terminal region (domain IV) DUF1970 PF09301.10 gi|300710585|ref|YP_003736399.1| - 0.2 11.9 0.6 15 5.9 0.1 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF1970) MoeA_N PF03453.17 gi|300710587|ref|YP_003736401.1| - 1.1e-41 142.2 4.8 2.4e-41 141.1 4.8 1.6 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) PBP_like PF12727.7 gi|300710587|ref|YP_003736401.1| - 1.2e-24 86.5 1.5 1.6e-24 86.1 0.1 1.8 2 0 0 2 2 2 1 PBP superfamily domain MoCF_biosynth PF00994.24 gi|300710587|ref|YP_003736401.1| - 6.6e-23 81.0 0.0 1.3e-22 80.0 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|300710587|ref|YP_003736401.1| - 7.1e-14 51.7 0.4 4e-13 49.3 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) SBP_bac_11 PF13531.6 gi|300710587|ref|YP_003736401.1| - 0.0056 16.5 0.1 0.028 14.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein RHH_1 PF01402.21 gi|300710587|ref|YP_003736401.1| - 0.93 9.5 4.6 0.27 11.2 0.7 2.2 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family HAD_2 PF13419.6 gi|300710588|ref|YP_003736402.1| - 8e-12 45.6 0.0 1.9e-11 44.4 0.0 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300710588|ref|YP_003736402.1| - 7.1e-08 33.0 0.0 5.7e-06 26.8 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300710588|ref|YP_003736402.1| - 8.3e-05 23.1 0.8 0.00014 22.3 0.8 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710588|ref|YP_003736402.1| - 0.022 14.8 0.2 0.057 13.5 0.2 1.7 1 0 0 1 1 1 0 HAD-hyrolase-like DUF4164 PF13747.6 gi|300710588|ref|YP_003736402.1| - 0.14 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Pterin_4a PF01329.19 gi|300710590|ref|YP_003736404.1| - 4.9e-26 90.7 0.0 6e-26 90.5 0.0 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase GlutR_N PF05201.15 gi|300710591|ref|YP_003736405.1| - 1.2e-32 112.7 0.3 5.9e-32 110.4 0.0 2.3 3 0 0 3 3 3 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|300710591|ref|YP_003736405.1| - 1e-29 103.3 0.1 2.4e-29 102.2 0.1 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|300710591|ref|YP_003736405.1| - 2e-19 69.9 1.4 2.2e-19 69.7 0.2 1.7 2 0 0 2 2 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain OCD_Mu_crystall PF02423.15 gi|300710591|ref|YP_003736405.1| - 8.1e-07 28.3 0.3 1.4e-06 27.5 0.3 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Glu_dehyd_C PF16912.5 gi|300710591|ref|YP_003736405.1| - 1.6e-05 24.5 0.9 3.9e-05 23.2 0.1 2.0 2 0 0 2 2 2 1 Glucose dehydrogenase C-terminus F420_oxidored PF03807.17 gi|300710591|ref|YP_003736405.1| - 2.3e-05 24.9 0.1 0.00012 22.5 0.1 2.3 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|300710591|ref|YP_003736405.1| - 4.6e-05 23.7 0.5 0.00016 21.9 0.1 2.2 3 0 0 3 3 3 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 gi|300710591|ref|YP_003736405.1| - 0.00047 20.6 0.6 0.0014 19.0 0.1 2.0 2 0 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_2 PF03446.15 gi|300710591|ref|YP_003736405.1| - 0.00092 19.4 0.1 0.005 17.0 0.0 2.1 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 gi|300710591|ref|YP_003736405.1| - 0.00098 19.4 1.9 0.0014 18.9 0.2 2.1 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|300710591|ref|YP_003736405.1| - 0.0062 15.9 0.1 0.016 14.6 0.0 1.6 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 gi|300710591|ref|YP_003736405.1| - 0.01 15.8 2.4 0.028 14.3 2.3 1.8 1 1 0 1 1 1 1 NAD(P)H-binding AlaDh_PNT_C PF01262.21 gi|300710591|ref|YP_003736405.1| - 0.018 14.4 0.6 0.032 13.5 0.6 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GFO_IDH_MocA PF01408.22 gi|300710591|ref|YP_003736405.1| - 0.018 15.8 0.0 0.046 14.5 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold DUF4410 PF14366.6 gi|300710591|ref|YP_003736405.1| - 0.022 14.6 0.2 0.068 13.1 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4410) ApbA PF02558.16 gi|300710591|ref|YP_003736405.1| - 0.088 12.4 0.1 0.28 10.8 0.0 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA PRODH PF18327.1 gi|300710591|ref|YP_003736405.1| - 0.31 11.3 6.8 0.43 10.8 0.2 3.4 3 0 0 3 3 3 0 Proline utilization A proline dehydrogenase N-terminal domain NAD_binding_7 PF13241.6 gi|300710592|ref|YP_003736406.1| - 6.1e-26 90.9 0.0 1e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Sirohm_synth_M PF14824.6 gi|300710592|ref|YP_003736406.1| - 7.2e-08 31.8 3.1 6.7e-07 28.6 0.4 2.5 2 0 0 2 2 2 1 Sirohaem biosynthesis protein central TrkA_N PF02254.18 gi|300710592|ref|YP_003736406.1| - 0.073 13.3 0.2 0.39 11.0 0.2 2.1 1 1 0 1 1 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|300710592|ref|YP_003736406.1| - 0.092 12.1 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AsnC_trans_reg2 PF17805.1 gi|300710593|ref|YP_003736407.1| - 7.7e-51 170.2 0.3 5.2e-24 84.2 0.0 2.4 2 0 0 2 2 2 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|300710593|ref|YP_003736407.1| - 0.0031 17.3 0.1 0.28 11.0 0.1 3.2 2 1 0 2 2 2 1 AsnC-type helix-turn-helix domain GvpL_GvpF PF06386.11 gi|300710593|ref|YP_003736407.1| - 0.041 13.8 0.5 0.078 12.9 0.5 1.5 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF CSD PF00313.22 gi|300710595|ref|YP_003736409.1| - 9.7e-20 70.2 0.2 1.1e-19 70.1 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Rho_RNA_bind PF07497.12 gi|300710595|ref|YP_003736409.1| - 0.024 14.5 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain S1-like PF14444.6 gi|300710595|ref|YP_003736409.1| - 0.047 13.6 2.9 0.074 13.0 2.9 1.4 1 1 0 1 1 1 0 S1-like CusF_Ec PF11604.8 gi|300710595|ref|YP_003736409.1| - 0.098 12.6 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF OB_RNB PF08206.11 gi|300710595|ref|YP_003736409.1| - 0.11 12.2 2.1 0.16 11.7 2.1 1.3 1 0 0 1 1 1 0 Ribonuclease B OB domain Prenyltransf PF01255.19 gi|300710596|ref|YP_003736410.1| - 8.6e-66 221.7 0.0 1e-65 221.4 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase MarR_2 PF12802.7 gi|300710597|ref|YP_003736411.1| - 0.016 15.1 0.2 0.045 13.6 0.2 1.7 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|300710597|ref|YP_003736411.1| - 0.034 14.1 0.1 0.062 13.3 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF1326 PF07040.11 gi|300710598|ref|YP_003736412.1| - 5e-53 179.7 0.3 5.7e-53 179.5 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1326) DUF2182 PF09948.9 gi|300710599|ref|YP_003736413.1| - 7e-57 192.4 14.5 9.9e-57 191.9 14.5 1.2 1 0 0 1 1 1 1 Predicted metal-binding integral membrane protein (DUF2182) Prenyltransf PF01255.19 gi|300710600|ref|YP_003736414.1| - 5.8e-25 88.1 0.0 2.7e-23 82.7 0.0 2.0 2 0 0 2 2 2 2 Putative undecaprenyl diphosphate synthase DUF92 PF01940.16 gi|300710601|ref|YP_003736415.1| - 8.2e-50 169.4 15.8 8.2e-50 169.4 15.8 3.1 2 2 0 2 2 2 1 Integral membrane protein DUF92 Toprim_4 PF13662.6 gi|300710602|ref|YP_003736416.1| - 3.8e-12 46.5 1.2 1.8e-11 44.3 0.6 2.4 2 1 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 gi|300710602|ref|YP_003736416.1| - 3.2e-06 27.5 0.0 8e-06 26.2 0.0 1.7 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|300710602|ref|YP_003736416.1| - 0.014 15.6 0.2 0.17 12.2 0.2 2.4 1 1 0 1 1 1 0 Toprim domain DUF1405 PF07187.11 gi|300710604|ref|YP_003736418.1| - 6.8e-49 165.9 15.1 8.5e-49 165.5 15.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1405) DUF3948 PF13134.6 gi|300710604|ref|YP_003736418.1| - 0.21 11.3 2.3 0.49 10.1 2.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) Aminotran_5 PF00266.19 gi|300710605|ref|YP_003736419.1| - 8.1e-23 81.0 0.0 9.9e-23 80.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|300710605|ref|YP_003736419.1| - 0.00099 18.5 0.0 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SKG6 PF08693.10 gi|300710606|ref|YP_003736420.1| - 0.054 12.9 1.0 0.054 12.9 1.0 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain ATPase_gene1 PF09527.10 gi|300710606|ref|YP_003736420.1| - 0.16 12.1 7.9 0.21 11.8 7.9 1.2 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Bacteriocin_IIc PF10439.9 gi|300710606|ref|YP_003736420.1| - 0.24 11.6 10.3 0.29 11.3 10.3 1.1 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide ETRAMP PF09716.10 gi|300710606|ref|YP_003736420.1| - 2.3 8.3 5.3 2 8.6 0.5 2.0 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) SOR_SNZ PF01680.17 gi|300710607|ref|YP_003736421.1| - 1.1e-100 335.6 10.5 1.4e-100 335.3 10.5 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|300710607|ref|YP_003736421.1| - 1.7e-09 37.4 8.5 1e-06 28.2 1.4 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|300710607|ref|YP_003736421.1| - 7.4e-05 22.0 1.3 0.011 14.8 0.1 2.4 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) IGPS PF00218.21 gi|300710607|ref|YP_003736421.1| - 0.0013 17.9 0.4 0.11 11.6 0.0 2.5 2 1 0 2 2 2 2 Indole-3-glycerol phosphate synthase OMPdecase PF00215.24 gi|300710607|ref|YP_003736421.1| - 0.015 14.9 0.3 0.36 10.4 0.3 2.4 1 1 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.14 gi|300710607|ref|YP_003736421.1| - 0.026 13.7 1.6 0.19 10.9 0.0 2.7 2 1 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|300710607|ref|YP_003736421.1| - 0.029 13.8 1.5 0.29 10.5 0.1 2.7 2 1 0 2 2 2 0 Histidine biosynthesis protein ArsP_2 PF11449.8 gi|300710608|ref|YP_003736422.1| - 4.3e-133 444.0 13.7 4.9e-133 443.8 13.7 1.0 1 0 0 1 1 1 1 Putative, 10TM heavy-metal exporter GFO_IDH_MocA PF01408.22 gi|300710609|ref|YP_003736423.1| - 7.2e-22 78.5 0.0 1.9e-21 77.1 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GHMP_kinases_N PF00288.26 gi|300710610|ref|YP_003736424.1| - 8.6e-13 48.3 5.3 9e-13 48.3 2.9 2.1 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|300710610|ref|YP_003736424.1| - 7.8e-08 32.6 0.1 2e-07 31.2 0.1 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal Pyr_redox_2 PF07992.14 gi|300710612|ref|YP_003736426.1| - 6.1e-43 147.1 0.2 8.7e-43 146.6 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300710612|ref|YP_003736426.1| - 3.9e-10 39.5 0.0 3.2e-07 29.9 0.0 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Rubredoxin_C PF18267.1 gi|300710612|ref|YP_003736426.1| - 9.8e-09 35.0 0.0 1.7e-07 31.1 0.0 2.6 3 0 0 3 3 3 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 gi|300710612|ref|YP_003736426.1| - 1.8e-07 31.6 0.2 0.15 12.6 0.2 3.8 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300710612|ref|YP_003736426.1| - 0.0066 16.4 0.2 2.8 7.9 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding DAO PF01266.24 gi|300710612|ref|YP_003736426.1| - 0.0099 15.5 0.1 1.3 8.5 0.0 2.9 2 1 0 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300710612|ref|YP_003736426.1| - 0.015 14.0 0.0 0.36 9.5 0.0 2.6 3 0 0 3 3 3 0 HI0933-like protein NAD_binding_8 PF13450.6 gi|300710612|ref|YP_003736426.1| - 0.038 14.2 1.4 0.25 11.6 0.0 2.9 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain PS_pyruv_trans PF04230.13 gi|300710612|ref|YP_003736426.1| - 0.074 13.0 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase Reductase_C PF14759.6 gi|300710612|ref|YP_003736426.1| - 0.11 13.1 0.0 0.31 11.6 0.0 1.8 1 0 0 1 1 1 0 Reductase C-terminal DUF4188 PF13826.6 gi|300710613|ref|YP_003736427.1| - 2e-26 92.6 0.0 2.4e-26 92.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4188) Dehydratase_hem PF13816.6 gi|300710613|ref|YP_003736427.1| - 0.004 16.6 0.0 0.005 16.3 0.0 1.1 1 0 0 1 1 1 1 Haem-containing dehydratase Aldo_ket_red PF00248.21 gi|300710614|ref|YP_003736428.1| - 1.2e-59 201.9 0.0 3.5e-45 154.4 0.0 2.0 2 0 0 2 2 2 2 Aldo/keto reductase family Complex1_LYR PF05347.15 gi|300710615|ref|YP_003736429.1| - 0.064 13.3 0.1 0.27 11.3 0.0 1.8 2 0 0 2 2 2 0 Complex 1 protein (LYR family) GPDPase_memb PF10110.9 gi|300710616|ref|YP_003736430.1| - 2.5e-06 26.5 6.3 2.5e-06 26.5 6.3 1.7 3 0 0 3 3 3 1 Membrane domain of glycerophosphoryl diester phosphodiesterase UPF0259 PF06790.11 gi|300710616|ref|YP_003736430.1| - 0.0069 16.2 3.7 0.011 15.5 3.7 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) GvpK PF05121.12 gi|300710617|ref|YP_003736431.1| - 0.016 15.3 0.1 0.03 14.4 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein K YrhK PF14145.6 gi|300710618|ref|YP_003736432.1| - 0.05 13.5 2.3 0.26 11.2 0.4 2.2 2 0 0 2 2 2 0 YrhK-like protein p6 PF17548.2 gi|300710618|ref|YP_003736432.1| - 0.094 12.7 0.1 0.44 10.6 0.0 2.0 2 0 0 2 2 2 0 Histone-like Protein p6 LtuA PF17446.2 gi|300710618|ref|YP_003736432.1| - 0.22 12.0 3.1 4.9 7.6 0.7 2.5 2 0 0 2 2 2 0 Late transcription unit A Oxidored_molyb PF00174.19 gi|300710619|ref|YP_003736433.1| - 3e-41 140.9 0.0 5.1e-41 140.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 gi|300710619|ref|YP_003736433.1| - 4.4e-09 36.5 0.1 1.2e-08 35.0 0.1 1.7 1 1 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Big_7 PF17957.1 gi|300710619|ref|YP_003736433.1| - 0.0011 19.7 0.0 0.0023 18.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial Ig domain BNR PF02012.20 gi|300710619|ref|YP_003736433.1| - 0.017 15.0 0.8 0.5 10.6 0.1 3.2 2 0 0 2 2 2 0 BNR/Asp-box repeat CPSase_L_D2 PF02786.17 gi|300710620|ref|YP_003736434.1| - 6.2e-100 333.0 0.0 1.9e-61 207.2 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|300710620|ref|YP_003736434.1| - 2.1e-24 86.2 0.0 4.3e-24 85.2 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp PF02222.22 gi|300710620|ref|YP_003736434.1| - 6.2e-17 61.7 0.0 1.5e-08 34.4 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|300710620|ref|YP_003736434.1| - 9.5e-14 51.4 0.0 5.5e-09 35.9 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|300710620|ref|YP_003736434.1| - 1.8e-13 50.4 0.1 4e-06 26.6 0.0 3.0 3 1 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|300710620|ref|YP_003736434.1| - 3.4e-13 50.0 0.1 8.7e-07 29.1 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Glyco_transf_9 PF01075.17 gi|300710620|ref|YP_003736434.1| - 0.1 11.9 0.0 0.65 9.3 0.0 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 9 (heptosyltransferase) ATP-grasp_5 PF13549.6 gi|300710620|ref|YP_003736434.1| - 0.11 12.0 0.0 0.52 9.7 0.0 2.1 2 0 0 2 2 2 0 ATP-grasp domain Glyco_trans_4_2 PF13477.6 gi|300710620|ref|YP_003736434.1| - 0.23 11.5 0.0 13 5.8 0.0 2.6 2 1 0 2 2 2 0 Glycosyl transferase 4-like B12-binding PF02310.19 gi|300710620|ref|YP_003736434.1| - 0.83 9.7 3.9 4 7.5 0.0 3.6 3 1 1 4 4 4 0 B12 binding domain NAD_binding_10 PF13460.6 gi|300710621|ref|YP_003736435.1| - 2.1e-45 154.9 0.1 2.4e-45 154.7 0.1 1.0 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|300710621|ref|YP_003736435.1| - 1.7e-17 63.8 0.0 2.3e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|300710621|ref|YP_003736435.1| - 6.5e-09 35.6 0.0 1.1e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|300710621|ref|YP_003736435.1| - 1.6e-07 30.6 0.0 2e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.20 gi|300710621|ref|YP_003736435.1| - 0.0021 18.2 0.1 0.0035 17.4 0.1 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 gi|300710621|ref|YP_003736435.1| - 0.0052 15.9 0.0 0.063 12.4 0.1 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain Semialdhyde_dh PF01118.24 gi|300710621|ref|YP_003736435.1| - 0.0067 16.9 0.0 0.012 16.0 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|300710621|ref|YP_003736435.1| - 0.021 15.1 0.1 0.041 14.2 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain HTH_53 PF18606.1 gi|300710621|ref|YP_003736435.1| - 0.064 12.9 0.1 0.23 11.2 0.0 1.9 1 1 0 1 1 1 0 Zap helix turn helix N-terminal domain GDPD PF03009.17 gi|300710622|ref|YP_003736436.1| - 1.6e-25 90.3 0.0 4.4e-25 88.9 0.0 1.6 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family CPSase_sm_chain PF00988.22 gi|300710623|ref|YP_003736437.1| - 2.1e-36 124.6 0.0 3.2e-35 120.7 0.0 2.3 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|300710623|ref|YP_003736437.1| - 3.4e-35 121.6 0.0 4.5e-35 121.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|300710623|ref|YP_003736437.1| - 0.00036 20.3 0.3 0.0077 16.0 0.3 2.1 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|300710623|ref|YP_003736437.1| - 0.006 16.4 0.1 0.0099 15.7 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_AsnC-type PF13404.6 gi|300710624|ref|YP_003736438.1| - 3.5e-18 65.1 2.5 2.4e-16 59.3 1.5 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|300710624|ref|YP_003736438.1| - 3.8e-15 55.2 0.2 9.1e-15 54.0 0.2 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|300710624|ref|YP_003736438.1| - 5.2e-09 35.9 1.5 9.4e-09 35.1 1.5 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 gi|300710624|ref|YP_003736438.1| - 1.5e-05 25.0 0.1 3.2e-05 23.9 0.0 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain MarR PF01047.22 gi|300710624|ref|YP_003736438.1| - 0.00027 20.8 0.0 0.00086 19.2 0.0 1.8 2 0 0 2 2 1 1 MarR family Sigma70_r4 PF04545.16 gi|300710624|ref|YP_003736438.1| - 0.00048 19.6 0.1 0.00095 18.6 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|300710624|ref|YP_003736438.1| - 0.00088 18.9 0.1 0.002 17.8 0.0 1.8 2 0 0 2 2 1 1 Sigma-70, region 4 MarR_2 PF12802.7 gi|300710624|ref|YP_003736438.1| - 0.0026 17.6 0.1 0.0055 16.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.12 gi|300710624|ref|YP_003736438.1| - 0.0039 16.9 1.7 0.0041 16.8 0.2 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|300710624|ref|YP_003736438.1| - 0.0047 16.8 0.1 0.01 15.8 0.1 1.6 1 1 0 1 1 1 1 HTH domain HrcA_DNA-bdg PF03444.15 gi|300710624|ref|YP_003736438.1| - 0.006 16.2 0.1 0.014 15.0 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NapD PF03927.13 gi|300710624|ref|YP_003736438.1| - 0.012 15.6 2.3 0.027 14.5 1.5 1.8 2 0 0 2 2 2 0 NapD protein HTH_IclR PF09339.10 gi|300710624|ref|YP_003736438.1| - 0.013 15.3 0.0 0.034 14.0 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_23 PF13384.6 gi|300710624|ref|YP_003736438.1| - 0.022 14.5 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain MIase PF02426.16 gi|300710624|ref|YP_003736438.1| - 0.027 14.6 0.2 0.17 12.1 0.1 2.0 1 1 1 2 2 2 0 Muconolactone delta-isomerase HTH_Tnp_ISL3 PF13542.6 gi|300710624|ref|YP_003736438.1| - 0.036 13.5 0.3 0.094 12.1 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF746 PF05344.11 gi|300710624|ref|YP_003736438.1| - 0.048 13.5 0.0 0.2 11.5 0.0 2.1 1 1 0 1 1 1 0 Domain of Unknown Function (DUF746) PaaX PF07848.12 gi|300710624|ref|YP_003736438.1| - 0.05 13.8 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein HTH_28 PF13518.6 gi|300710624|ref|YP_003736438.1| - 0.065 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GYD PF08734.11 gi|300710624|ref|YP_003736438.1| - 0.068 13.1 2.1 0.057 13.4 0.9 1.6 2 0 0 2 2 1 0 GYD domain CM_2 PF01817.21 gi|300710624|ref|YP_003736438.1| - 0.078 13.3 3.1 1.5 9.2 0.0 2.7 3 0 0 3 3 3 0 Chorismate mutase type II Rab15_effector PF15208.6 gi|300710624|ref|YP_003736438.1| - 0.11 11.8 0.3 0.13 11.5 0.3 1.2 1 0 0 1 1 1 0 Rab15 effector PHP_C PF13263.6 gi|300710625|ref|YP_003736439.1| - 4.4e-17 61.6 0.3 1.4e-16 60.0 0.0 2.0 2 0 0 2 2 2 1 PHP-associated DAGK_cat PF00781.24 gi|300710626|ref|YP_003736440.1| - 2.7e-20 72.3 0.4 3.9e-20 71.7 0.4 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NUDIX PF00293.28 gi|300710627|ref|YP_003736441.1| - 1.2e-11 44.8 0.1 1.4e-11 44.5 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|300710627|ref|YP_003736441.1| - 0.018 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 NUDIX domain DUF2345 PF10106.9 gi|300710627|ref|YP_003736441.1| - 0.47 10.3 2.2 1.1 9.1 2.2 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) Lactamase_B PF00753.27 gi|300710628|ref|YP_003736442.1| - 1.4e-17 64.3 9.5 2.4e-17 63.6 9.5 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300710628|ref|YP_003736442.1| - 4.2e-05 23.1 0.8 5.2e-05 22.9 0.8 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|300710628|ref|YP_003736442.1| - 0.00037 20.0 0.0 0.00059 19.3 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain ADH_zinc_N PF00107.26 gi|300710631|ref|YP_003736445.1| - 2.5e-37 127.8 0.3 2.1e-36 124.8 0.2 2.2 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|300710631|ref|YP_003736445.1| - 3e-21 76.9 0.0 5.1e-21 76.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|300710631|ref|YP_003736445.1| - 8.5e-14 51.4 0.0 2.6e-13 49.8 0.0 1.9 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 gi|300710631|ref|YP_003736445.1| - 2.4e-05 23.9 1.4 5e-05 22.9 0.9 1.7 1 1 0 2 2 2 1 short chain dehydrogenase AlaDh_PNT_C PF01262.21 gi|300710631|ref|YP_003736445.1| - 0.00025 20.4 0.9 0.00041 19.7 0.9 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DapB_N PF01113.20 gi|300710631|ref|YP_003736445.1| - 0.0051 16.9 1.6 0.0068 16.5 0.6 1.6 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus THF_DHG_CYH_C PF02882.19 gi|300710631|ref|YP_003736445.1| - 0.045 13.1 0.0 0.078 12.3 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 gi|300710631|ref|YP_003736445.1| - 0.068 12.6 0.3 0.099 12.1 0.3 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|300710631|ref|YP_003736445.1| - 0.11 12.4 1.5 0.16 11.8 1.5 1.4 1 1 0 1 1 1 0 NAD(P)H-binding Eno-Rase_NADH_b PF12242.8 gi|300710631|ref|YP_003736445.1| - 0.11 12.3 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3HCDH_N PF02737.18 gi|300710631|ref|YP_003736445.1| - 0.11 12.3 0.4 0.19 11.6 0.4 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACP_syn_III_C PF08541.10 gi|300710631|ref|YP_003736445.1| - 0.19 11.9 2.2 0.43 10.8 0.3 2.4 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MoCF_biosynth PF00994.24 gi|300710632|ref|YP_003736446.1| - 5.5e-32 110.4 0.8 6.7e-32 110.1 0.8 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain Peptidase_S66 PF02016.15 gi|300710632|ref|YP_003736446.1| - 0.13 12.3 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 LD-carboxypeptidase N-terminal domain Cupin_2 PF07883.11 gi|300710633|ref|YP_003736447.1| - 2.3e-09 36.8 1.4 3.3e-09 36.3 1.4 1.2 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|300710633|ref|YP_003736447.1| - 0.045 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 gi|300710633|ref|YP_003736447.1| - 0.052 13.1 0.1 0.087 12.4 0.1 1.4 1 1 0 1 1 1 0 Cupin DMSP_lyase PF16867.5 gi|300710633|ref|YP_003736447.1| - 0.061 13.0 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase Cupin_3 PF05899.12 gi|300710633|ref|YP_003736447.1| - 0.082 12.6 0.2 0.12 12.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) PCO_ADO PF07847.12 gi|300710633|ref|YP_003736447.1| - 0.083 12.3 0.0 0.084 12.3 0.0 1.1 1 0 0 1 1 1 0 PCO_ADO TrkA_N PF02254.18 gi|300710634|ref|YP_003736448.1| - 0.0025 18.0 0.1 0.0031 17.8 0.1 1.2 1 0 0 1 1 1 1 TrkA-N domain GMP_synt_C PF00958.22 gi|300710635|ref|YP_003736449.1| - 1.8e-28 98.4 0.3 3.9e-28 97.4 0.1 1.7 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|300710635|ref|YP_003736449.1| - 7.4e-09 35.1 0.0 4.1e-05 22.8 0.0 2.2 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 gi|300710635|ref|YP_003736449.1| - 1.1e-05 24.4 0.0 0.0011 17.8 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase QueC PF06508.13 gi|300710635|ref|YP_003736449.1| - 0.0045 16.5 0.0 0.022 14.2 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|300710635|ref|YP_003736449.1| - 0.0079 15.8 0.0 0.027 14.1 0.0 1.8 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.19 gi|300710635|ref|YP_003736449.1| - 0.011 15.8 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|300710635|ref|YP_003736449.1| - 0.017 14.8 0.1 0.029 14.1 0.1 1.3 1 0 0 1 1 1 0 Asparagine synthase Arginosuc_synth PF00764.19 gi|300710635|ref|YP_003736449.1| - 0.061 12.6 0.1 0.097 11.9 0.1 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase CTP_synth_N PF06418.14 gi|300710636|ref|YP_003736450.1| - 2.9e-123 410.4 0.1 3.7e-123 410.0 0.1 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|300710636|ref|YP_003736450.1| - 1.8e-54 184.4 0.0 3e-54 183.7 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|300710636|ref|YP_003736450.1| - 5.9e-07 29.5 0.0 1.7e-06 27.9 0.0 1.8 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|300710636|ref|YP_003736450.1| - 0.0038 17.3 0.0 0.0054 16.8 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GATase_3 PF07685.14 gi|300710636|ref|YP_003736450.1| - 0.045 13.4 0.0 0.097 12.3 0.0 1.6 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DLH PF01738.18 gi|300710637|ref|YP_003736451.1| - 9.4e-05 22.1 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|300710637|ref|YP_003736451.1| - 0.00035 20.3 0.9 0.00041 20.0 0.2 1.6 2 1 0 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) DUF2048 PF09752.9 gi|300710637|ref|YP_003736451.1| - 0.0009 18.4 0.0 0.0013 17.9 0.0 1.1 1 0 0 1 1 1 1 Abhydrolase domain containing 18 Hydrolase_4 PF12146.8 gi|300710637|ref|YP_003736451.1| - 0.0025 17.1 0.2 0.054 12.7 0.2 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 gi|300710637|ref|YP_003736451.1| - 0.0041 17.0 0.0 0.0057 16.5 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Thioesterase PF00975.20 gi|300710637|ref|YP_003736451.1| - 0.0086 16.2 0.5 0.32 11.1 0.3 2.1 1 1 1 2 2 2 1 Thioesterase domain Abhydrolase_6 PF12697.7 gi|300710637|ref|YP_003736451.1| - 0.034 14.8 8.0 0.067 13.8 8.0 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|300710637|ref|YP_003736451.1| - 0.057 13.2 0.0 0.075 12.8 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 gi|300710637|ref|YP_003736451.1| - 0.062 13.0 0.0 0.14 11.8 0.0 1.5 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 gi|300710637|ref|YP_003736451.1| - 0.08 12.6 0.4 3 7.4 0.3 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|300710637|ref|YP_003736451.1| - 0.1 12.5 0.1 0.16 11.9 0.1 1.3 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase PF00756.20 gi|300710637|ref|YP_003736451.1| - 0.14 11.8 0.1 0.19 11.3 0.1 1.2 1 0 0 1 1 1 0 Putative esterase PspA_IM30 PF04012.12 gi|300710638|ref|YP_003736452.1| - 7.8e-25 87.7 35.8 7.8e-25 87.7 35.8 1.7 2 0 0 2 2 2 1 PspA/IM30 family DUF1664 PF07889.12 gi|300710638|ref|YP_003736452.1| - 0.0015 18.5 4.5 0.0015 18.5 4.5 3.3 2 1 1 3 3 3 1 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|300710638|ref|YP_003736452.1| - 0.0054 15.7 25.8 0.0054 15.7 25.8 2.5 1 1 2 3 3 2 2 Spc7 kinetochore protein YabA PF06156.13 gi|300710638|ref|YP_003736452.1| - 0.62 10.7 30.2 0.17 12.5 4.5 3.7 1 1 2 3 3 3 0 Initiation control protein YabA DUF3450 PF11932.8 gi|300710638|ref|YP_003736452.1| - 0.92 8.8 33.2 1.2 8.3 7.6 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) FTA4 PF13093.6 gi|300710638|ref|YP_003736452.1| - 1.1 9.1 29.9 3 7.7 19.4 3.4 1 1 1 2 2 2 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Imm7 PF15585.6 gi|300710638|ref|YP_003736452.1| - 1.2 9.5 5.7 1.9 8.8 0.8 2.7 1 1 0 2 2 2 0 Immunity protein 7 DUF5082 PF16888.5 gi|300710638|ref|YP_003736452.1| - 2.1 8.7 30.4 0.64 10.3 12.5 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) AAA_13 PF13166.6 gi|300710638|ref|YP_003736452.1| - 2.8 6.5 36.1 0.82 8.2 24.6 2.2 1 1 1 2 2 2 0 AAA domain FOXP-CC PF16159.5 gi|300710638|ref|YP_003736452.1| - 4.3 8.1 10.2 7.3 7.3 0.3 2.8 2 1 0 2 2 2 0 FOXP coiled-coil domain DASH_Dam1 PF08653.10 gi|300710638|ref|YP_003736452.1| - 4.5 7.2 7.6 2 8.3 1.2 3.2 3 0 0 3 3 3 0 DASH complex subunit Dam1 FapA PF03961.13 gi|300710638|ref|YP_003736452.1| - 4.6 5.7 30.0 5 5.6 19.2 2.9 1 1 1 2 2 2 0 Flagellar Assembly Protein A ApoO PF09769.9 gi|300710638|ref|YP_003736452.1| - 7.2 6.6 11.7 1.8 8.5 3.9 3.1 2 1 1 3 3 3 0 Apolipoprotein O Snf7 PF03357.21 gi|300710638|ref|YP_003736452.1| - 9.1 5.8 55.9 5.2e+02 0.1 43.9 3.6 1 1 1 2 2 1 0 Snf7 HPP PF04982.13 gi|300710639|ref|YP_003736453.1| - 2e-15 57.1 8.0 2.9e-15 56.5 8.0 1.3 1 0 0 1 1 1 1 HPP family WD40 PF00400.32 gi|300710639|ref|YP_003736453.1| - 0.15 12.9 0.0 0.44 11.5 0.0 1.8 1 1 0 1 1 1 0 WD domain, G-beta repeat FUSC_2 PF13515.6 gi|300710639|ref|YP_003736453.1| - 0.31 11.2 10.6 1.1 9.4 10.1 2.2 1 1 0 1 1 1 0 Fusaric acid resistance protein-like DUF5337 PF17272.2 gi|300710640|ref|YP_003736454.1| - 0.27 11.1 8.4 0.053 13.4 2.5 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5337) DUF1772 PF08592.11 gi|300710640|ref|YP_003736454.1| - 1.5 9.1 8.6 1.9 8.8 1.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1772) CK2S PF15011.6 gi|300710641|ref|YP_003736455.1| - 0.09 12.7 1.3 7 6.5 0.1 2.2 2 0 0 2 2 2 0 Casein Kinase 2 substrate YihI PF04220.12 gi|300710641|ref|YP_003736455.1| - 0.097 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Der GTPase activator (YihI) DUF2975 PF11188.8 gi|300710641|ref|YP_003736455.1| - 2.7 7.9 7.2 1.1 9.1 2.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) Apolipoprotein PF01442.18 gi|300710642|ref|YP_003736456.1| - 0.039 13.8 1.3 0.083 12.8 1.3 1.6 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain RhodobacterPufX PF11511.8 gi|300710642|ref|YP_003736456.1| - 0.15 11.7 0.1 0.15 11.7 0.1 2.2 2 0 0 2 2 2 0 Intrinsic membrane protein PufX DUF4177 PF13783.6 gi|300710643|ref|YP_003736457.1| - 0.0021 18.3 0.0 0.003 17.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) DUF3426 PF11906.8 gi|300710645|ref|YP_003736459.1| - 0.0085 16.3 0.0 0.027 14.6 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3426) MR_MLE_C PF13378.6 gi|300710646|ref|YP_003736460.1| - 2e-37 128.9 1.9 2.8e-37 128.4 1.9 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300710646|ref|YP_003736460.1| - 2.2e-12 47.2 0.0 4.6e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MAAL_C PF07476.11 gi|300710646|ref|YP_003736460.1| - 0.0099 15.1 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus DUF1611 PF07755.11 gi|300710647|ref|YP_003736461.1| - 2.1e-69 232.8 0.1 2.8e-69 232.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain DUF1611_N PF17396.2 gi|300710647|ref|YP_003736461.1| - 5.7e-29 100.2 0.0 1.7e-28 98.7 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain AAA_26 PF13500.6 gi|300710647|ref|YP_003736461.1| - 0.0015 18.4 0.1 0.081 12.7 0.1 2.3 1 1 1 2 2 2 2 AAA domain PHO4 PF01384.20 gi|300710648|ref|YP_003736462.1| - 2.9e-37 128.5 42.3 1e-36 126.7 35.1 2.4 1 1 0 2 2 2 2 Phosphate transporter family CitMHS PF03600.16 gi|300710649|ref|YP_003736463.1| - 1.8e-58 198.1 10.7 1.8e-58 198.1 10.7 2.0 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 gi|300710649|ref|YP_003736463.1| - 1.5e-22 80.3 41.7 2.1e-15 56.8 18.5 3.1 2 1 1 3 3 3 3 Sodium:sulfate symporter transmembrane region TrkA_C PF02080.21 gi|300710649|ref|YP_003736463.1| - 1.6e-17 63.1 4.9 1.9e-10 40.4 0.2 2.6 2 0 0 2 2 2 2 TrkA-C domain acVLRF1 PF18859.1 gi|300710650|ref|YP_003736464.1| - 1.4e-30 106.3 3.0 1.4e-30 106.3 3.0 2.2 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|300710650|ref|YP_003736464.1| - 2.6e-09 37.5 1.4 2.6e-09 37.5 1.4 2.2 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 ADIP PF11559.8 gi|300710650|ref|YP_003736464.1| - 0.00023 21.3 1.7 0.00051 20.2 1.7 1.5 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding eRF1_2 PF03464.15 gi|300710650|ref|YP_003736464.1| - 0.00035 20.9 0.0 0.00055 20.3 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 Pox_A_type_inc PF04508.12 gi|300710650|ref|YP_003736464.1| - 0.0097 15.7 9.6 0.4 10.6 0.2 3.4 3 0 0 3 3 3 2 Viral A-type inclusion protein repeat DUF1192 PF06698.11 gi|300710650|ref|YP_003736464.1| - 2.6 8.2 13.4 0.43 10.7 5.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) ZapB PF06005.12 gi|300710650|ref|YP_003736464.1| - 4.6 7.8 10.0 3 8.3 7.3 2.0 2 0 0 2 2 2 0 Cell division protein ZapB ABC_tran_CTD PF16326.5 gi|300710650|ref|YP_003736464.1| - 9.6 6.5 11.3 20 5.6 7.5 3.0 2 1 1 3 3 3 0 ABC transporter C-terminal domain DUF1405 PF07187.11 gi|300710652|ref|YP_003736466.1| - 2.1e-34 118.8 13.9 2.6e-34 118.5 13.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1405) PelG PF16933.5 gi|300710652|ref|YP_003736466.1| - 0.0028 16.6 1.0 0.0028 16.6 1.0 1.5 1 1 0 1 1 1 1 Putative exopolysaccharide Exporter (EPS-E) CTP_transf_1 PF01148.20 gi|300710652|ref|YP_003736466.1| - 0.035 13.9 5.7 0.057 13.2 5.7 1.3 1 0 0 1 1 1 0 Cytidylyltransferase family HTH_5 PF01022.20 gi|300710653|ref|YP_003736467.1| - 3.7e-20 71.5 0.2 2.7e-17 62.3 0.1 3.0 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710653|ref|YP_003736467.1| - 6.9e-19 67.7 5.5 1.4e-13 50.7 0.2 3.1 2 1 1 3 3 3 2 Helix-turn-helix domain TrmB PF01978.19 gi|300710653|ref|YP_003736467.1| - 7.8e-12 44.9 0.1 3.1e-06 27.0 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300710653|ref|YP_003736467.1| - 1.8e-11 43.7 4.4 2.4e-09 36.9 0.4 2.8 3 0 0 3 3 3 2 MarR family DprA_WH PF17782.1 gi|300710653|ref|YP_003736467.1| - 1.2e-09 38.1 2.6 0.00017 21.6 0.0 2.7 2 1 0 2 2 2 2 DprA winged helix domain MarR PF01047.22 gi|300710653|ref|YP_003736467.1| - 4.3e-08 33.0 0.1 1.8e-07 31.0 0.1 2.0 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|300710653|ref|YP_003736467.1| - 9.9e-08 31.4 0.1 1e-06 28.2 0.3 2.6 2 1 0 2 2 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|300710653|ref|YP_003736467.1| - 1e-07 32.2 0.0 0.0013 19.0 0.0 2.3 2 0 0 2 2 2 2 Transcriptional regulator Fe_dep_repress PF01325.19 gi|300710653|ref|YP_003736467.1| - 3.1e-06 27.3 0.0 2.5e-05 24.4 0.0 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|300710653|ref|YP_003736467.1| - 1.1e-05 25.2 0.1 6.5e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_IclR PF09339.10 gi|300710653|ref|YP_003736467.1| - 1.2e-05 25.0 3.8 0.012 15.4 0.1 3.0 3 1 0 3 3 2 2 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|300710653|ref|YP_003736467.1| - 2e-05 24.5 0.1 0.00026 20.9 0.1 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|300710653|ref|YP_003736467.1| - 2.7e-05 24.6 0.1 6.1e-05 23.4 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|300710653|ref|YP_003736467.1| - 9.8e-05 22.1 0.0 0.14 11.8 0.0 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4423) PadR PF03551.14 gi|300710653|ref|YP_003736467.1| - 9.9e-05 22.2 1.0 0.0011 18.9 0.1 3.0 3 2 1 4 4 3 1 Transcriptional regulator PadR-like family HTH_CodY PF08222.11 gi|300710653|ref|YP_003736467.1| - 0.00045 19.7 0.0 0.00092 18.7 0.0 1.5 1 0 0 1 1 1 1 CodY helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|300710653|ref|YP_003736467.1| - 0.00075 19.2 0.0 0.018 14.8 0.0 2.4 2 0 0 2 2 2 1 LexA DNA binding domain HTH_10 PF04967.12 gi|300710653|ref|YP_003736467.1| - 0.0025 17.6 0.0 0.0075 16.1 0.0 1.8 1 0 0 1 1 1 1 HTH DNA binding domain DUF2250 PF10007.9 gi|300710653|ref|YP_003736467.1| - 0.0034 17.5 0.0 0.074 13.2 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_47 PF16221.5 gi|300710653|ref|YP_003736467.1| - 0.011 15.3 0.0 6 6.5 0.0 2.3 2 0 0 2 2 2 0 winged helix-turn-helix HTH_AsnC-type PF13404.6 gi|300710653|ref|YP_003736467.1| - 0.012 15.5 0.6 0.11 12.4 0.1 3.0 3 1 0 3 3 2 0 AsnC-type helix-turn-helix domain DDRGK PF09756.9 gi|300710653|ref|YP_003736467.1| - 0.012 15.2 0.0 0.022 14.4 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain GntR PF00392.21 gi|300710653|ref|YP_003736467.1| - 0.017 14.7 0.0 0.26 10.9 0.0 2.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family RP-C PF03428.13 gi|300710653|ref|YP_003736467.1| - 0.018 14.7 0.1 0.097 12.3 0.0 2.2 3 0 0 3 3 3 0 Replication protein C N-terminal domain HTH_29 PF13551.6 gi|300710653|ref|YP_003736467.1| - 0.019 15.0 0.2 0.055 13.5 0.0 1.9 2 0 0 2 2 1 0 Winged helix-turn helix ArsR PF09824.9 gi|300710653|ref|YP_003736467.1| - 0.024 14.3 0.0 0.071 12.7 0.0 1.7 2 1 0 2 2 2 0 ArsR transcriptional regulator HxlR PF01638.17 gi|300710653|ref|YP_003736467.1| - 0.029 14.2 0.0 0.18 11.6 0.0 2.1 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_38 PF13936.6 gi|300710653|ref|YP_003736467.1| - 0.032 14.0 0.2 0.23 11.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|300710653|ref|YP_003736467.1| - 0.032 14.0 0.0 0.075 12.8 0.0 1.6 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 gi|300710653|ref|YP_003736467.1| - 0.033 14.1 0.0 0.07 13.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain BLACT_WH PF17778.1 gi|300710653|ref|YP_003736467.1| - 0.036 14.1 0.6 0.14 12.2 0.2 2.1 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain HTH_40 PF14493.6 gi|300710653|ref|YP_003736467.1| - 0.076 13.5 0.1 0.85 10.1 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|300710653|ref|YP_003736467.1| - 0.081 13.1 0.6 0.21 11.7 0.1 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain Cdc6_C PF09079.11 gi|300710653|ref|YP_003736467.1| - 0.086 12.8 0.0 0.43 10.6 0.0 2.2 2 0 0 2 2 1 0 CDC6, C terminal winged helix domain HTH_23 PF13384.6 gi|300710653|ref|YP_003736467.1| - 0.088 12.6 0.6 0.67 9.8 0.1 2.7 3 1 0 3 3 2 0 Homeodomain-like domain DUF742 PF05331.11 gi|300710653|ref|YP_003736467.1| - 0.097 12.5 0.1 3.8 7.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_1 PF00126.27 gi|300710653|ref|YP_003736467.1| - 0.11 12.4 0.0 0.66 10.0 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family MerR PF00376.23 gi|300710653|ref|YP_003736467.1| - 0.12 12.2 0.2 1.1 9.1 0.2 2.5 1 1 0 1 1 1 0 MerR family regulatory protein DUF2513 PF10711.9 gi|300710653|ref|YP_003736467.1| - 0.13 12.6 0.0 0.26 11.6 0.0 1.5 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) FaeA PF04703.12 gi|300710653|ref|YP_003736467.1| - 0.16 12.4 0.0 0.36 11.3 0.0 1.6 1 0 0 1 1 1 0 FaeA-like protein TnsD PF15978.5 gi|300710653|ref|YP_003736467.1| - 0.16 10.9 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Asparaginase PF00710.20 gi|300710655|ref|YP_003736469.1| - 7.7e-59 198.4 0.3 1.5e-58 197.5 0.3 1.4 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|300710655|ref|YP_003736469.1| - 1.8e-25 89.4 0.0 1.5e-24 86.4 0.0 2.2 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|300710655|ref|YP_003736469.1| - 4.8e-16 57.8 0.0 7.9e-16 57.1 0.0 1.4 1 0 0 1 1 1 1 GatD N-terminal domain Acetyltransf_1 PF00583.25 gi|300710656|ref|YP_003736470.1| - 1.1e-12 48.2 0.1 7.5e-12 45.5 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|300710656|ref|YP_003736470.1| - 2.9e-06 28.0 1.3 3.4e-05 24.5 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300710656|ref|YP_003736470.1| - 3.8e-06 26.9 0.0 3.5e-05 23.7 0.0 2.2 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300710656|ref|YP_003736470.1| - 3.2e-05 24.0 0.0 7.2e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.7 gi|300710656|ref|YP_003736470.1| - 5.4e-05 23.6 0.0 0.00011 22.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300710656|ref|YP_003736470.1| - 0.00025 21.1 0.1 0.0046 17.0 0.0 2.5 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300710656|ref|YP_003736470.1| - 0.00047 20.1 0.0 0.0017 18.3 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein MarR PF01047.22 gi|300710658|ref|YP_003736472.1| - 2.4e-05 24.1 0.0 3.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300710658|ref|YP_003736472.1| - 0.00028 20.7 0.0 0.00038 20.3 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|300710658|ref|YP_003736472.1| - 0.034 14.0 0.0 0.04 13.8 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit Rrf2 PF02082.20 gi|300710658|ref|YP_003736472.1| - 0.058 13.7 0.0 0.069 13.5 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator DUF5518 PF17647.1 gi|300710659|ref|YP_003736473.1| - 0.75 10.0 8.2 1.5 9.0 8.2 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5518) TrkA_C PF02080.21 gi|300710660|ref|YP_003736474.1| - 0.002 17.9 0.3 0.0095 15.7 0.1 2.2 2 0 0 2 2 2 1 TrkA-C domain Melittin PF01372.17 gi|300710660|ref|YP_003736474.1| - 0.16 12.0 0.8 0.61 10.2 0.8 2.0 1 0 0 1 1 1 0 Melittin TrkA_C PF02080.21 gi|300710661|ref|YP_003736475.1| - 1.4e-15 56.8 0.6 7.7e-15 54.5 0.1 2.2 2 1 0 2 2 2 1 TrkA-C domain Na_H_Exchanger PF00999.21 gi|300710662|ref|YP_003736476.1| - 6.5e-48 163.4 43.9 7.9e-48 163.1 43.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|300710663|ref|YP_003736477.1| - 9.9e-29 100.0 0.1 1.5e-28 99.4 0.1 1.3 1 0 0 1 1 1 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|300710663|ref|YP_003736477.1| - 1.1e-14 54.1 1.6 1.1e-14 54.1 1.6 2.2 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 gi|300710663|ref|YP_003736477.1| - 0.00026 20.3 0.2 0.00037 19.8 0.2 1.2 1 0 0 1 1 1 1 Ion transport protein Sacchrp_dh_NADP PF03435.18 gi|300710663|ref|YP_003736477.1| - 0.043 14.1 0.1 0.96 9.7 0.0 2.2 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain SBP_bac_3 PF00497.20 gi|300710663|ref|YP_003736477.1| - 0.1 12.0 0.2 0.15 11.4 0.2 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 AI-2E_transport PF01594.16 gi|300710664|ref|YP_003736478.1| - 4.9e-47 160.7 35.9 5.8e-47 160.4 35.9 1.0 1 0 0 1 1 1 1 AI-2E family transporter AI-2E_transport PF01594.16 gi|300710665|ref|YP_003736479.1| - 1.2e-40 139.7 22.8 1.4e-40 139.4 22.8 1.0 1 0 0 1 1 1 1 AI-2E family transporter PNP_UDP_1 PF01048.20 gi|300710666|ref|YP_003736480.1| - 6.6e-47 159.7 3.0 7.5e-47 159.6 3.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DUF63 PF01889.17 gi|300710667|ref|YP_003736481.1| - 3.6e-20 73.3 4.0 5.1e-20 72.8 4.0 1.2 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 Spore_permease PF03845.13 gi|300710667|ref|YP_003736481.1| - 0.029 13.2 0.1 0.052 12.4 0.1 1.3 1 0 0 1 1 1 0 Spore germination protein Peptidase_A8 PF01252.18 gi|300710667|ref|YP_003736481.1| - 1.5 9.0 8.4 1.5 9.0 0.4 3.2 2 1 1 3 3 3 0 Signal peptidase (SPase) II DeoC PF01791.9 gi|300710668|ref|YP_003736482.1| - 2.5e-10 40.4 1.8 4.3e-10 39.6 1.8 1.2 1 1 0 1 1 1 1 DeoC/LacD family aldolase His_biosynth PF00977.21 gi|300710668|ref|YP_003736482.1| - 0.0074 15.8 0.1 0.015 14.8 0.1 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|300710668|ref|YP_003736482.1| - 0.032 13.6 2.2 0.043 13.2 0.4 1.8 1 1 1 2 2 2 0 Nitronate monooxygenase AA_permease_2 PF13520.6 gi|300710669|ref|YP_003736483.1| - 4.2e-48 164.2 42.3 5.7e-48 163.8 42.3 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|300710669|ref|YP_003736483.1| - 4.3e-38 131.1 40.7 5.9e-38 130.7 40.7 1.2 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|300710669|ref|YP_003736483.1| - 1.7e-22 80.4 6.1 2.3e-12 47.6 0.1 3.2 2 1 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.13 gi|300710669|ref|YP_003736483.1| - 2.2e-07 30.0 14.2 2.2e-07 30.0 14.2 2.6 2 1 0 2 2 2 1 Spore germination protein AA_permease_C PF13906.6 gi|300710669|ref|YP_003736483.1| - 2.2 8.4 12.1 0.3 11.2 7.1 2.3 2 0 0 2 2 2 0 C-terminus of AA_permease Radical_SAM PF04055.21 gi|300710670|ref|YP_003736484.1| - 7.4e-23 81.7 0.3 1.3e-22 80.9 0.1 1.5 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|300710670|ref|YP_003736484.1| - 9.3e-19 67.3 0.1 2.1e-18 66.2 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|300710670|ref|YP_003736484.1| - 0.0019 18.1 0.0 0.0041 17.1 0.0 1.6 1 0 0 1 1 1 1 TRAM domain MS_channel PF00924.18 gi|300710671|ref|YP_003736485.1| - 5.1e-37 127.4 0.0 6.7e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2062 PF09835.9 gi|300710671|ref|YP_003736485.1| - 0.013 15.4 2.2 0.013 15.4 2.2 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2062) FA_desaturase PF00487.24 gi|300710671|ref|YP_003736485.1| - 0.13 12.0 3.0 0.2 11.5 3.0 1.2 1 0 0 1 1 1 0 Fatty acid desaturase Cation_efflux PF01545.21 gi|300710672|ref|YP_003736486.1| - 9.8e-39 133.1 4.0 1.3e-38 132.8 4.0 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|300710672|ref|YP_003736486.1| - 6.1e-16 58.3 6.1 9.3e-16 57.7 6.1 1.2 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Androgen_recep PF02166.16 gi|300710672|ref|YP_003736486.1| - 0.35 9.7 2.0 0.49 9.2 2.0 1.1 1 0 0 1 1 1 0 Androgen receptor HIT PF01230.23 gi|300710673|ref|YP_003736487.1| - 2.2e-13 50.8 0.0 3.3e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|300710673|ref|YP_003736487.1| - 0.00063 20.2 0.0 0.00099 19.6 0.0 1.3 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|300710673|ref|YP_003736487.1| - 0.0022 17.8 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 PDGF PF00341.17 gi|300710674|ref|YP_003736488.1| - 0.015 15.6 2.5 0.059 13.7 0.1 2.0 1 1 1 2 2 2 0 PDGF/VEGF domain Fer4_2 PF12797.7 gi|300710674|ref|YP_003736488.1| - 0.037 14.1 1.0 8.2 6.7 0.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Sgf11 PF08209.11 gi|300710674|ref|YP_003736488.1| - 0.42 10.2 6.6 2.8 7.6 0.2 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) p47_phox_C PF08944.11 gi|300710674|ref|YP_003736488.1| - 0.67 9.4 5.0 0.15 11.5 1.2 1.9 2 1 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain Zn-ribbon_8 PF09723.10 gi|300710674|ref|YP_003736488.1| - 0.76 9.9 4.6 8.2 6.6 4.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain Peptidase_M24 PF00557.24 gi|300710675|ref|YP_003736489.1| - 6.9e-41 140.2 0.3 8.3e-41 140.0 0.3 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Asparaginase_2 PF01112.18 gi|300710676|ref|YP_003736490.1| - 2.9e-63 213.7 6.6 3.3e-63 213.6 6.6 1.0 1 0 0 1 1 1 1 Asparaginase DUF1485 PF07364.12 gi|300710677|ref|YP_003736491.1| - 0.016 14.5 0.9 0.022 14.1 0.9 1.2 1 0 0 1 1 1 0 Metallopeptidase family M81 TPR_1 PF00515.28 gi|300710677|ref|YP_003736491.1| - 0.097 12.5 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Integrin_b_cyt PF08725.11 gi|300710677|ref|YP_003736491.1| - 0.13 11.9 0.6 18 5.1 0.1 2.4 2 0 0 2 2 2 0 Integrin beta cytoplasmic domain FIVAR PF07554.13 gi|300710678|ref|YP_003736492.1| - 0.11 13.3 0.8 2 9.3 1.1 2.1 1 1 1 2 2 2 0 FIVAR domain Iso_dh PF00180.20 gi|300710679|ref|YP_003736493.1| - 1.4e-108 363.1 0.0 1.7e-108 362.9 0.0 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Abhydrolase_1 PF00561.20 gi|300710680|ref|YP_003736494.1| - 2.5e-21 76.5 0.2 1.4e-19 70.8 0.2 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300710680|ref|YP_003736494.1| - 9.8e-17 62.3 1.3 1.2e-16 62.0 1.3 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300710680|ref|YP_003736494.1| - 3.5e-11 42.8 0.0 6.8e-11 41.9 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|300710680|ref|YP_003736494.1| - 0.018 15.2 0.0 0.26 11.4 0.0 2.5 3 0 0 3 3 3 0 TAP-like protein AAA_5 PF07728.14 gi|300710681|ref|YP_003736495.1| - 8.5e-15 55.0 0.0 2.3e-13 50.3 0.0 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|300710681|ref|YP_003736495.1| - 1.9e-05 25.1 0.0 5e-05 23.7 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|300710681|ref|YP_003736495.1| - 0.00012 21.8 0.0 0.065 12.9 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_25 PF13481.6 gi|300710681|ref|YP_003736495.1| - 0.00038 20.1 0.0 0.0022 17.6 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|300710681|ref|YP_003736495.1| - 0.00056 20.3 0.0 0.0016 18.9 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|300710681|ref|YP_003736495.1| - 0.0015 18.3 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 gi|300710681|ref|YP_003736495.1| - 0.004 17.0 0.0 0.013 15.3 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|300710681|ref|YP_003736495.1| - 0.0074 16.5 0.0 0.028 14.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|300710681|ref|YP_003736495.1| - 0.0087 15.6 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region ATPase_2 PF01637.18 gi|300710681|ref|YP_003736495.1| - 0.009 15.9 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea PhoH PF02562.16 gi|300710681|ref|YP_003736495.1| - 0.012 15.1 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein Sigma54_activ_2 PF14532.6 gi|300710681|ref|YP_003736495.1| - 0.014 15.5 0.0 0.058 13.5 0.0 2.0 3 0 0 3 3 2 0 Sigma-54 interaction domain IPT PF01745.16 gi|300710681|ref|YP_003736495.1| - 0.019 14.3 0.0 0.032 13.6 0.0 1.3 1 0 0 1 1 1 0 Isopentenyl transferase AAA_33 PF13671.6 gi|300710681|ref|YP_003736495.1| - 0.023 14.9 0.0 0.039 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 gi|300710681|ref|YP_003736495.1| - 0.029 13.6 0.0 0.068 12.4 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain ABC_tran PF00005.27 gi|300710681|ref|YP_003736495.1| - 0.033 14.7 0.0 0.06 13.9 0.0 1.8 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 gi|300710681|ref|YP_003736495.1| - 0.049 12.9 0.0 0.12 11.7 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 gi|300710681|ref|YP_003736495.1| - 0.064 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 gi|300710681|ref|YP_003736495.1| - 0.13 12.7 0.1 1.2 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain Cupin_2 PF07883.11 gi|300710682|ref|YP_003736496.1| - 6.1e-13 48.3 3.3 8.2e-13 47.9 3.3 1.2 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|300710682|ref|YP_003736496.1| - 0.00084 19.3 0.0 0.001 18.9 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|300710682|ref|YP_003736496.1| - 0.0097 15.8 0.6 0.012 15.6 0.6 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_7 PF12973.7 gi|300710682|ref|YP_003736496.1| - 0.014 15.3 0.6 0.019 14.8 0.6 1.3 1 0 0 1 1 1 0 ChrR Cupin-like domain PCO_ADO PF07847.12 gi|300710682|ref|YP_003736496.1| - 0.022 14.2 0.2 0.055 12.9 0.2 1.6 2 0 0 2 2 2 0 PCO_ADO MarR_2 PF12802.7 gi|300710683|ref|YP_003736497.1| - 0.014 15.3 0.1 0.014 15.3 0.1 2.2 3 0 0 3 3 3 0 MarR family COX5B PF01215.19 gi|300710683|ref|YP_003736497.1| - 0.069 12.8 0.5 0.11 12.2 0.5 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb RNA_POL_M_15KD PF02150.16 gi|300710683|ref|YP_003736497.1| - 0.072 13.0 1.2 0.17 11.8 1.2 1.5 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit DNA_RNApol_7kD PF03604.13 gi|300710683|ref|YP_003736497.1| - 0.19 11.5 2.7 0.36 10.5 2.7 1.4 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Response_reg PF00072.24 gi|300710684|ref|YP_003736498.1| - 3.9e-30 104.3 0.0 4.3e-30 104.2 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain HEAT_2 PF13646.6 gi|300710685|ref|YP_003736499.1| - 1.1e-19 70.6 15.3 8.8e-12 45.3 3.1 4.0 3 2 2 5 5 5 4 HEAT repeats HEAT PF02985.22 gi|300710685|ref|YP_003736499.1| - 0.013 15.6 10.2 0.37 11.2 0.1 4.2 5 0 0 5 5 5 0 HEAT repeat HemY_N PF07219.13 gi|300710685|ref|YP_003736499.1| - 0.072 13.3 1.3 0.32 11.2 0.0 2.3 2 0 0 2 2 2 0 HemY protein N-terminus PAS PF00989.25 gi|300710686|ref|YP_003736500.1| - 8.9e-45 151.3 1.4 2.4e-12 46.9 0.0 5.1 4 0 0 4 4 4 4 PAS fold PAS_4 PF08448.10 gi|300710686|ref|YP_003736500.1| - 7.9e-41 138.8 12.6 1.6e-13 50.8 0.5 5.1 4 0 0 4 4 4 4 PAS fold PAS_9 PF13426.7 gi|300710686|ref|YP_003736500.1| - 1.6e-40 137.5 1.6 3.2e-11 43.4 0.1 5.5 5 0 0 5 5 5 4 PAS domain PAS_3 PF08447.12 gi|300710686|ref|YP_003736500.1| - 9.6e-40 134.8 0.2 3.2e-15 56.2 0.0 4.7 4 0 0 4 4 4 4 PAS fold PAS_8 PF13188.7 gi|300710686|ref|YP_003736500.1| - 3.6e-27 93.9 1.5 2.3e-07 30.6 0.0 4.5 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|300710686|ref|YP_003736500.1| - 5.2e-19 68.9 14.1 2.2e-13 50.7 0.5 5.2 4 1 0 5 5 5 2 GAF domain HATPase_c PF02518.26 gi|300710686|ref|YP_003736500.1| - 6.9e-16 58.7 0.0 1.7e-15 57.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|300710686|ref|YP_003736500.1| - 3.2e-15 55.9 0.1 1.2e-14 54.1 0.1 2.1 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain GAF_3 PF13492.6 gi|300710686|ref|YP_003736500.1| - 1.7e-12 47.8 0.0 5.3e-05 23.6 0.0 2.6 2 0 0 2 2 2 2 GAF domain GAF PF01590.26 gi|300710686|ref|YP_003736500.1| - 6.2e-12 46.3 0.1 8.3e-06 26.5 0.1 2.9 2 0 0 2 2 2 2 GAF domain PAS_10 PF13596.6 gi|300710686|ref|YP_003736500.1| - 6.1e-09 36.4 0.1 0.085 13.5 0.0 4.4 4 0 0 4 4 4 3 PAS domain PAS_7 PF12860.7 gi|300710686|ref|YP_003736500.1| - 8.7e-08 32.3 10.4 0.079 13.1 0.1 5.9 5 2 0 5 5 5 3 PAS fold PAS_12 PF18095.1 gi|300710686|ref|YP_003736500.1| - 0.00077 19.1 0.0 1.2 8.7 0.0 2.5 2 0 0 2 2 2 2 UPF0242 C-terminal PAS-like domain OKR_DC_1_N PF03709.15 gi|300710686|ref|YP_003736500.1| - 0.00082 19.6 0.7 0.0024 18.1 0.1 2.1 2 0 0 2 2 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain Response_reg PF00072.24 gi|300710686|ref|YP_003736500.1| - 0.00092 19.4 0.0 0.0025 17.9 0.0 1.8 1 0 0 1 1 1 1 Response regulator receiver domain HAS-barrel PF09378.10 gi|300710686|ref|YP_003736500.1| - 0.15 12.3 0.8 1.9 8.7 0.1 3.0 3 0 0 3 3 3 0 HAS barrel domain Response_reg PF00072.24 gi|300710687|ref|YP_003736501.1| - 3.7e-16 59.3 0.1 5.5e-16 58.7 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain HalX PF08663.10 gi|300710687|ref|YP_003736501.1| - 1.3e-14 54.2 0.9 4.3e-14 52.6 0.9 1.9 1 0 0 1 1 1 1 HalX domain HMG-CoA_red PF00368.18 gi|300710689|ref|YP_003736503.1| - 3.6e-130 434.2 6.6 4.1e-130 434.0 6.6 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Amidohydro_3 PF07969.11 gi|300710690|ref|YP_003736504.1| - 1.3e-86 292.0 9.9 1.5e-86 291.8 9.9 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|300710690|ref|YP_003736504.1| - 8.3e-18 64.8 0.2 1.1e-13 51.3 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family iPGM_N PF06415.13 gi|300710691|ref|YP_003736505.1| - 2.2e-76 256.1 0.1 6e-76 254.7 0.1 1.7 1 1 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|300710691|ref|YP_003736505.1| - 7.1e-69 231.9 0.0 8.1e-69 231.7 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|300710691|ref|YP_003736505.1| - 3.4e-08 33.5 0.1 7.1e-08 32.4 0.1 1.6 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|300710691|ref|YP_003736505.1| - 3.8e-05 23.2 0.1 0.00011 21.7 0.0 1.9 2 0 0 2 2 2 1 Sulfatase PglZ PF08665.12 gi|300710691|ref|YP_003736505.1| - 0.0013 18.9 0.2 0.0024 18.0 0.2 1.3 1 0 0 1 1 1 1 PglZ domain SHOCT PF09851.9 gi|300710692|ref|YP_003736506.1| - 1.2e-05 24.9 1.5 2.7e-05 23.7 1.5 1.6 1 0 0 1 1 1 1 Short C-terminal domain GvpG PF05120.12 gi|300710692|ref|YP_003736506.1| - 1.6e-05 24.8 0.5 3.4e-05 23.8 0.5 1.5 1 0 0 1 1 1 1 Gas vesicle protein G DUF1707 PF08044.11 gi|300710692|ref|YP_003736506.1| - 0.0013 18.7 3.1 0.003 17.6 3.0 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF1707) CdvA PF18822.1 gi|300710692|ref|YP_003736506.1| - 0.0034 17.2 0.0 0.0048 16.7 0.0 1.2 1 0 0 1 1 1 1 CdvA-like coiled-coil domain BOFC_N PF08977.10 gi|300710692|ref|YP_003736506.1| - 0.056 13.4 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Bypass of Forespore C, N terminal Phage_holin_3_6 PF07332.11 gi|300710692|ref|YP_003736506.1| - 3.1 7.9 9.9 2.5 8.2 7.9 1.9 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4307 PF14155.6 gi|300710692|ref|YP_003736506.1| - 4.7 7.1 5.1 3.4 7.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) NurA PF09376.10 gi|300710693|ref|YP_003736507.1| - 2.8e-17 63.2 0.0 3.6e-17 62.9 0.0 1.1 1 0 0 1 1 1 1 NurA domain DUF87 PF01935.17 gi|300710696|ref|YP_003736510.1| - 2.5e-08 34.3 0.0 4.1e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|300710696|ref|YP_003736510.1| - 4.3e-05 22.3 0.9 0.019 13.6 0.1 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|300710696|ref|YP_003736510.1| - 0.0021 17.0 0.0 0.028 13.3 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain TrwB_AAD_bind PF10412.9 gi|300710696|ref|YP_003736510.1| - 0.027 13.4 0.0 0.18 10.7 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA PF00004.29 gi|300710696|ref|YP_003736510.1| - 0.09 13.2 0.0 5.3 7.5 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|300710696|ref|YP_003736510.1| - 0.093 13.0 0.0 0.51 10.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|300710696|ref|YP_003736510.1| - 0.15 11.4 0.0 0.33 10.3 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Usp PF00582.26 gi|300710697|ref|YP_003736511.1| - 1.7e-38 132.3 0.8 1.9e-38 132.1 0.8 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF2065 PF09838.9 gi|300710698|ref|YP_003736512.1| - 0.019 15.0 4.6 0.43 10.6 4.6 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2065) EamA PF00892.20 gi|300710700|ref|YP_003736514.1| - 6.5e-41 139.7 32.2 1.8e-21 76.8 10.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 gi|300710700|ref|YP_003736514.1| - 1.7 8.7 7.8 3.1 7.8 0.3 2.6 3 0 0 3 3 3 0 Putative transmembrane family 234 RVT_3 PF13456.6 gi|300710701|ref|YP_003736515.1| - 8.1e-09 35.3 0.0 1.3e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|300710701|ref|YP_003736515.1| - 2.3e-05 24.6 0.0 2.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 RNase H Peptidase_M24 PF00557.24 gi|300710702|ref|YP_003736516.1| - 5.5e-14 52.3 0.5 8.2e-14 51.8 0.5 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|300710702|ref|YP_003736516.1| - 8.1e-07 29.8 0.1 2.2e-06 28.4 0.0 1.8 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain COX15-CtaA PF02628.15 gi|300710703|ref|YP_003736517.1| - 1.1e-12 47.6 22.4 1.6e-11 43.9 13.0 3.3 1 1 3 4 4 4 3 Cytochrome oxidase assembly protein MerC PF03203.14 gi|300710703|ref|YP_003736517.1| - 7.5 7.0 29.2 0.3 11.5 8.3 2.9 1 1 1 3 3 3 0 MerC mercury resistance protein AAA PF00004.29 gi|300710704|ref|YP_003736518.1| - 1.5e-10 41.6 0.0 6.6e-10 39.5 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|300710704|ref|YP_003736518.1| - 3e-05 24.3 0.0 0.0099 16.2 0.0 3.1 2 1 0 2 2 1 1 AAA domain RuvB_N PF05496.12 gi|300710704|ref|YP_003736518.1| - 7.2e-05 22.6 0.0 0.00017 21.3 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_assoc_2 PF16193.5 gi|300710704|ref|YP_003736518.1| - 0.00028 21.2 0.2 0.00076 19.8 0.2 1.8 1 0 0 1 1 1 1 AAA C-terminal domain AAA_30 PF13604.6 gi|300710704|ref|YP_003736518.1| - 0.00046 20.0 0.6 0.002 17.8 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|300710704|ref|YP_003736518.1| - 0.0011 19.0 0.0 0.003 17.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|300710704|ref|YP_003736518.1| - 0.0012 19.3 0.9 0.0069 16.8 0.1 2.7 2 1 0 2 2 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|300710704|ref|YP_003736518.1| - 0.0018 18.3 0.0 0.028 14.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|300710704|ref|YP_003736518.1| - 0.0021 18.2 0.0 0.0057 16.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|300710704|ref|YP_003736518.1| - 0.0066 16.7 0.1 0.026 14.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|300710704|ref|YP_003736518.1| - 0.0068 16.2 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|300710704|ref|YP_003736518.1| - 0.0071 15.6 0.0 0.022 14.1 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin Bac_DnaA PF00308.18 gi|300710704|ref|YP_003736518.1| - 0.0093 15.8 0.0 0.48 10.2 0.0 2.6 2 0 0 2 2 2 1 Bacterial dnaA protein RNA_helicase PF00910.22 gi|300710704|ref|YP_003736518.1| - 0.021 15.2 0.0 0.06 13.7 0.0 1.9 1 1 0 1 1 1 0 RNA helicase DNA_pol3_delta PF06144.13 gi|300710704|ref|YP_003736518.1| - 0.024 14.4 0.0 0.049 13.4 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Rad17 PF03215.15 gi|300710704|ref|YP_003736518.1| - 0.032 14.2 0.0 0.061 13.3 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_18 PF13238.6 gi|300710704|ref|YP_003736518.1| - 0.034 14.7 0.1 0.13 12.8 0.0 2.1 2 0 0 2 2 1 0 AAA domain AAA_7 PF12775.7 gi|300710704|ref|YP_003736518.1| - 0.035 13.6 0.0 0.06 12.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF815 PF05673.13 gi|300710704|ref|YP_003736518.1| - 0.052 12.7 0.0 0.15 11.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NACHT PF05729.12 gi|300710704|ref|YP_003736518.1| - 0.061 13.3 0.0 0.23 11.4 0.0 2.0 2 0 0 2 2 2 0 NACHT domain TIP49 PF06068.13 gi|300710704|ref|YP_003736518.1| - 0.07 12.3 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_2 PF07724.14 gi|300710704|ref|YP_003736518.1| - 0.073 13.2 0.0 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) Hydin_ADK PF17213.3 gi|300710704|ref|YP_003736518.1| - 0.1 12.8 0.1 0.1 12.8 0.1 1.9 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_6 PF12774.7 gi|300710704|ref|YP_003736518.1| - 0.14 11.0 0.0 0.25 10.3 0.0 1.3 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Mg_chelatase PF01078.21 gi|300710704|ref|YP_003736518.1| - 0.15 11.4 0.0 0.26 10.6 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|300710704|ref|YP_003736518.1| - 0.16 11.7 0.0 0.39 10.4 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain RsgA_GTPase PF03193.16 gi|300710704|ref|YP_003736518.1| - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 gi|300710704|ref|YP_003736518.1| - 0.2 11.2 6.7 0.26 10.9 0.0 3.3 3 1 0 4 4 4 0 AAA domain Acetyltransf_3 PF13302.7 gi|300710706|ref|YP_003736520.1| - 1.1e-15 58.6 0.3 1.4e-15 58.2 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PTCB-BRCT PF12738.7 gi|300710706|ref|YP_003736520.1| - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 twin BRCT domain Amidohydro_1 PF01979.20 gi|300710707|ref|YP_003736521.1| - 3.5e-50 171.2 3.7 4.4e-50 170.9 3.7 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|300710707|ref|YP_003736521.1| - 1.5e-16 61.0 9.6 5.9e-14 52.4 3.5 2.1 1 1 0 2 2 2 2 Amidohydrolase family AP_endonuc_2 PF01261.24 gi|300710707|ref|YP_003736521.1| - 0.0072 15.8 0.4 0.024 14.1 0.4 1.9 1 1 1 2 2 2 1 Xylose isomerase-like TIM barrel Peptidase_M50 PF02163.22 gi|300710707|ref|YP_003736521.1| - 0.048 12.9 0.0 0.056 12.7 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M50 Urocanase_C PF17392.2 gi|300710707|ref|YP_003736521.1| - 0.057 12.9 0.1 0.11 11.9 0.1 1.5 1 0 0 1 1 1 0 Urocanase C-terminal domain zinc_ribbon_2 PF13240.6 gi|300710708|ref|YP_003736522.1| - 1.5e-05 24.6 0.3 2e-05 24.1 0.3 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|300710708|ref|YP_003736522.1| - 0.00019 21.4 0.2 0.00027 20.9 0.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon Rad50_zn_hook PF04423.14 gi|300710708|ref|YP_003736522.1| - 0.00043 20.1 0.2 0.0007 19.4 0.2 1.3 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-ribbon_3 PF13248.6 gi|300710708|ref|YP_003736522.1| - 0.0007 18.9 0.4 0.00099 18.4 0.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain UPF0547 PF10571.9 gi|300710708|ref|YP_003736522.1| - 0.001 19.1 1.5 0.001 19.1 1.5 1.7 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zinc_ribbon_15 PF17032.5 gi|300710708|ref|YP_003736522.1| - 0.0056 17.4 0.1 0.0081 16.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon family TM2 PF05154.16 gi|300710708|ref|YP_003736522.1| - 0.0085 16.4 0.2 0.012 15.9 0.2 1.2 1 0 0 1 1 1 1 TM2 domain HypA PF01155.19 gi|300710708|ref|YP_003736522.1| - 0.04 13.9 0.0 0.05 13.6 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|300710708|ref|YP_003736522.1| - 0.063 13.3 0.1 0.088 12.8 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbons Sigma_M_inh PF17453.2 gi|300710708|ref|YP_003736522.1| - 0.1 13.1 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 Sigma-M inhibitor PLDc_N PF13396.6 gi|300710708|ref|YP_003736522.1| - 3.9 7.5 8.5 1 9.4 0.3 2.6 2 1 1 3 3 3 0 Phospholipase_D-nuclease N-terminal Acetyltransf_1 PF00583.25 gi|300710709|ref|YP_003736523.1| - 5.8e-16 58.8 0.0 7e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300710709|ref|YP_003736523.1| - 9.9e-12 45.1 0.0 1.5e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300710709|ref|YP_003736523.1| - 2.5e-10 40.4 0.0 3.2e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|300710709|ref|YP_003736523.1| - 2.9e-06 28.0 0.0 3.2e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|300710709|ref|YP_003736523.1| - 3.8e-06 26.6 0.0 8.9e-06 25.4 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300710709|ref|YP_003736523.1| - 6.5e-06 26.2 0.0 1.1e-05 25.5 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300710709|ref|YP_003736523.1| - 0.00036 20.6 0.0 0.00062 19.8 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 gi|300710709|ref|YP_003736523.1| - 0.001 19.0 0.0 0.0027 17.6 0.0 1.6 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|300710709|ref|YP_003736523.1| - 0.0022 18.2 0.0 0.0027 17.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|300710709|ref|YP_003736523.1| - 0.028 14.4 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase YdjM PF04307.14 gi|300710710|ref|YP_003736524.1| - 4.6e-11 42.3 13.0 7.9e-11 41.6 13.0 1.5 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase HTH_31 PF13560.6 gi|300710711|ref|YP_003736525.1| - 1.9e-08 34.5 0.2 6.7e-08 32.8 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|300710711|ref|YP_003736525.1| - 1.6e-07 31.2 0.0 4.6e-07 29.8 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|300710711|ref|YP_003736525.1| - 6.9e-07 29.2 0.1 2.6e-06 27.4 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix HTH_26 PF13443.6 gi|300710711|ref|YP_003736525.1| - 0.043 14.3 0.0 0.22 12.0 0.0 2.2 2 1 1 3 3 3 0 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 gi|300710711|ref|YP_003736525.1| - 0.085 12.4 0.5 0.32 10.6 0.1 2.2 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|300710711|ref|YP_003736525.1| - 0.099 12.6 0.1 0.32 11.0 0.1 1.9 1 0 0 1 1 1 0 HTH domain YdaS_antitoxin PF15943.5 gi|300710711|ref|YP_003736525.1| - 0.12 12.3 0.0 0.27 11.1 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Antibiotic_NAT PF02522.14 gi|300710712|ref|YP_003736526.1| - 3e-14 53.4 0.0 3.7e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Aminoglycoside 3-N-acetyltransferase Paramyxo_P_V_N PF13825.6 gi|300710712|ref|YP_003736526.1| - 0.03 13.8 0.1 0.046 13.1 0.1 1.2 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Peptidase_M14 PF00246.24 gi|300710713|ref|YP_003736527.1| - 1.2e-11 45.0 0.0 2e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Zinc carboxypeptidase PPC PF04151.15 gi|300710713|ref|YP_003736527.1| - 0.0013 19.7 0.0 0.0049 17.9 0.0 2.1 1 0 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain HMG_CoA_synt_N PF01154.17 gi|300710714|ref|YP_003736528.1| - 7.2e-24 84.6 0.0 1.2e-23 83.9 0.0 1.4 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMG_CoA_synt_C PF08540.10 gi|300710714|ref|YP_003736528.1| - 2.5e-21 76.6 0.0 4.2e-21 75.8 0.0 1.3 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal DUF2150 PF09920.9 gi|300710715|ref|YP_003736529.1| - 1.2e-70 237.3 10.0 1.4e-70 237.1 10.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) DUF3027 PF11228.8 gi|300710715|ref|YP_003736529.1| - 0.086 12.8 0.2 0.15 12.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3027) TatD_DNase PF01026.21 gi|300710716|ref|YP_003736530.1| - 8.1e-16 58.2 0.0 2.3e-14 53.4 0.0 2.0 1 1 0 1 1 1 1 TatD related DNase DUF2336 PF10098.9 gi|300710716|ref|YP_003736530.1| - 0.056 12.9 0.2 0.078 12.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2336) NYN PF01936.18 gi|300710717|ref|YP_003736531.1| - 2.6e-19 70.2 0.1 3.3e-19 69.8 0.1 1.1 1 0 0 1 1 1 1 NYN domain Peripla_BP_4 PF13407.6 gi|300710717|ref|YP_003736531.1| - 0.0029 17.2 0.1 0.0038 16.8 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain CoA_binding_2 PF13380.6 gi|300710717|ref|YP_003736531.1| - 0.0043 17.5 0.2 0.067 13.7 0.2 2.0 1 1 1 2 2 2 1 CoA binding domain PIN7 PF18475.1 gi|300710717|ref|YP_003736531.1| - 0.027 15.1 0.0 0.046 14.4 0.0 1.4 1 0 0 1 1 1 0 PIN domain DUF5615 PF18480.1 gi|300710717|ref|YP_003736531.1| - 0.052 13.3 0.1 0.12 12.2 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5615) GCV_T PF01571.21 gi|300710718|ref|YP_003736532.1| - 9.1e-86 287.4 0.0 1.1e-85 287.1 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|300710718|ref|YP_003736532.1| - 1.8e-20 72.6 0.0 4.2e-20 71.4 0.0 1.6 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 gi|300710718|ref|YP_003736532.1| - 9.7e-05 22.5 0.1 0.024 14.8 0.0 2.3 1 1 1 2 2 2 2 Sarcosine oxidase, gamma subunit family GCV_H PF01597.19 gi|300710719|ref|YP_003736533.1| - 3.2e-37 127.1 0.0 3.6e-37 127.0 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|300710719|ref|YP_003736533.1| - 0.031 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Biotin-requiring enzyme GDC-P PF02347.16 gi|300710720|ref|YP_003736534.1| - 3.2e-105 352.4 0.0 3.7e-105 352.2 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Cys_Met_Meta_PP PF01053.20 gi|300710720|ref|YP_003736534.1| - 0.0002 20.0 0.0 0.00026 19.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|300710721|ref|YP_003736535.1| - 4.7e-09 35.7 0.0 6.9e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|300710721|ref|YP_003736535.1| - 0.0019 17.6 0.0 0.0031 16.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase GDC-P PF02347.16 gi|300710721|ref|YP_003736535.1| - 0.0046 15.8 0.0 0.021 13.7 0.0 1.9 2 0 0 2 2 2 1 Glycine cleavage system P-protein Aminotran_1_2 PF00155.21 gi|300710721|ref|YP_003736535.1| - 0.13 11.4 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II NikR_C PF08753.11 gi|300710722|ref|YP_003736536.1| - 2e-21 75.9 1.1 3.2e-21 75.3 1.1 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|300710722|ref|YP_003736536.1| - 2.7e-06 27.1 0.0 4.3e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|300710722|ref|YP_003736536.1| - 0.0077 16.3 0.0 0.016 15.3 0.0 1.6 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system VapB_antitoxin PF09957.9 gi|300710722|ref|YP_003736536.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB RHH_5 PF07878.11 gi|300710722|ref|YP_003736536.1| - 0.13 12.1 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 SBF PF01758.16 gi|300710723|ref|YP_003736537.1| - 2.5e-50 170.9 9.7 2.5e-50 170.9 9.7 2.0 2 0 0 2 2 2 1 Sodium Bile acid symporter family Ribonuc_L-PSP PF01042.21 gi|300710724|ref|YP_003736538.1| - 6.8e-15 55.2 0.0 8.2e-15 54.9 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP HTH_5 PF01022.20 gi|300710725|ref|YP_003736539.1| - 5.2e-11 42.2 0.8 8.4e-11 41.6 0.2 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710725|ref|YP_003736539.1| - 3.3e-08 33.5 4.1 6.2e-08 32.6 0.5 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|300710725|ref|YP_003736539.1| - 1.9e-05 25.1 0.1 5.1e-05 23.7 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|300710725|ref|YP_003736539.1| - 0.00036 20.4 0.1 0.00095 19.0 0.1 1.8 1 1 0 1 1 1 1 MarR family MarR PF01047.22 gi|300710725|ref|YP_003736539.1| - 0.0015 18.4 0.0 0.0063 16.4 0.0 1.9 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|300710725|ref|YP_003736539.1| - 0.0016 18.3 0.0 0.0029 17.5 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|300710725|ref|YP_003736539.1| - 0.0037 17.0 0.1 0.023 14.4 0.0 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) DUF480 PF04337.12 gi|300710725|ref|YP_003736539.1| - 0.0053 16.9 0.1 0.014 15.5 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function, DUF480 Penicillinase_R PF03965.16 gi|300710725|ref|YP_003736539.1| - 0.028 14.8 0.1 0.073 13.4 0.0 1.7 2 0 0 2 2 2 0 Penicillinase repressor GntR PF00392.21 gi|300710725|ref|YP_003736539.1| - 0.061 13.0 0.1 0.13 11.9 0.0 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Trimer_CC PF08954.11 gi|300710725|ref|YP_003736539.1| - 4.4 7.0 6.6 6.7 6.3 3.6 2.6 2 1 0 2 2 2 0 Trimerisation motif HTH_5 PF01022.20 gi|300710726|ref|YP_003736540.1| - 3.1e-12 46.1 0.0 5.3e-12 45.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710726|ref|YP_003736540.1| - 1.8e-10 40.7 1.8 2.9e-10 40.0 1.8 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300710726|ref|YP_003736540.1| - 4.9e-07 29.5 0.8 7.8e-07 28.9 0.8 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300710726|ref|YP_003736540.1| - 8.5e-07 28.8 0.0 1.5e-06 28.0 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300710726|ref|YP_003736540.1| - 4.4e-05 23.3 0.0 6.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|300710726|ref|YP_003736540.1| - 4.6e-05 23.2 0.0 5.8e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_27 PF13463.6 gi|300710726|ref|YP_003736540.1| - 0.00079 19.9 0.0 0.0012 19.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|300710726|ref|YP_003736540.1| - 0.0084 16.5 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_1 PF00126.27 gi|300710726|ref|YP_003736540.1| - 0.014 15.3 0.4 0.038 13.9 0.4 1.9 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family GntR PF00392.21 gi|300710726|ref|YP_003736540.1| - 0.017 14.7 0.1 0.038 13.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HxlR PF01638.17 gi|300710726|ref|YP_003736540.1| - 0.018 14.9 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|300710726|ref|YP_003736540.1| - 0.021 15.0 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain CvfB_WH PF17783.1 gi|300710726|ref|YP_003736540.1| - 0.023 14.5 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 CvfB-like winged helix domain Cdc6_C PF09079.11 gi|300710726|ref|YP_003736540.1| - 0.038 14.0 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain PAX PF00292.18 gi|300710726|ref|YP_003736540.1| - 0.045 13.7 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 'Paired box' domain Fe_dep_repress PF01325.19 gi|300710726|ref|YP_003736540.1| - 0.045 14.0 0.0 0.071 13.3 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF2250 PF10007.9 gi|300710726|ref|YP_003736540.1| - 0.074 13.2 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4364 PF14277.6 gi|300710726|ref|YP_003736540.1| - 0.12 12.1 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) pXO2-72 PF17443.2 gi|300710726|ref|YP_003736540.1| - 0.13 12.5 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 Rrf2 PF02082.20 gi|300710726|ref|YP_003736540.1| - 0.16 12.3 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Methyltransf_31 PF13847.6 gi|300710727|ref|YP_003736541.1| - 3.4e-33 114.6 0.0 5.1e-33 114.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300710727|ref|YP_003736541.1| - 2.3e-24 85.9 0.1 1.7e-23 83.1 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300710727|ref|YP_003736541.1| - 8.1e-24 84.1 0.0 2.4e-23 82.6 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300710727|ref|YP_003736541.1| - 1.6e-16 60.4 0.0 5e-16 58.7 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|300710727|ref|YP_003736541.1| - 6.2e-12 45.7 0.0 1.1e-11 44.9 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|300710727|ref|YP_003736541.1| - 6.2e-11 42.9 0.0 1.5e-10 41.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300710727|ref|YP_003736541.1| - 7.5e-11 42.1 0.0 1.5e-10 41.1 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|300710727|ref|YP_003736541.1| - 4.4e-08 32.9 0.0 6.9e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|300710727|ref|YP_003736541.1| - 3.1e-07 30.1 0.0 5.1e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|300710727|ref|YP_003736541.1| - 1.1e-06 28.2 0.0 1.7e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|300710727|ref|YP_003736541.1| - 8.8e-06 25.5 0.0 1.5e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.15 gi|300710727|ref|YP_003736541.1| - 0.00018 21.4 0.0 0.00036 20.5 0.0 1.4 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_32 PF13679.6 gi|300710727|ref|YP_003736541.1| - 0.00047 20.2 0.0 0.00069 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|300710727|ref|YP_003736541.1| - 0.0024 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain FtsJ PF01728.19 gi|300710727|ref|YP_003736541.1| - 0.019 15.1 0.0 0.03 14.4 0.0 1.4 1 1 0 1 1 1 0 FtsJ-like methyltransferase ADH_zinc_N PF00107.26 gi|300710727|ref|YP_003736541.1| - 0.023 14.7 0.0 0.11 12.5 0.0 2.1 1 1 0 2 2 2 0 Zinc-binding dehydrogenase Met_10 PF02475.16 gi|300710727|ref|YP_003736541.1| - 0.035 13.8 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein GCD14 PF08704.10 gi|300710727|ref|YP_003736541.1| - 0.035 13.8 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_3 PF01596.17 gi|300710727|ref|YP_003736541.1| - 0.08 12.1 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_16 PF10294.9 gi|300710727|ref|YP_003736541.1| - 0.082 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_18 PF12847.7 gi|300710727|ref|YP_003736541.1| - 0.23 11.4 0.0 0.35 10.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain LMWPc PF01451.21 gi|300710728|ref|YP_003736542.1| - 6e-24 85.0 0.2 1.5e-23 83.8 0.2 1.5 1 1 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase zf-H2C2_2 PF13465.6 gi|300710729|ref|YP_003736543.1| - 9.5e-05 22.6 1.6 0.0032 17.8 0.2 2.1 2 0 0 2 2 2 1 Zinc-finger double domain Rubredoxin PF00301.20 gi|300710729|ref|YP_003736543.1| - 0.00065 19.7 2.3 0.52 10.4 0.4 2.1 2 0 0 2 2 2 2 Rubredoxin zf-C2H2 PF00096.26 gi|300710729|ref|YP_003736543.1| - 0.00078 19.8 1.2 0.49 11.0 0.1 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zinc_ribbon_9 PF14369.6 gi|300710729|ref|YP_003736543.1| - 0.00089 19.5 0.5 0.071 13.4 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon DUF1610 PF07754.11 gi|300710729|ref|YP_003736543.1| - 0.002 18.0 1.0 0.41 10.6 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) PhnA_Zn_Ribbon PF08274.12 gi|300710729|ref|YP_003736543.1| - 0.0055 16.6 0.4 0.016 15.1 0.4 1.7 1 1 0 1 1 1 1 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.10 gi|300710729|ref|YP_003736543.1| - 0.0072 16.4 0.5 0.82 9.8 0.1 2.1 2 0 0 2 2 2 1 Zinc ribbon domain Zn_Tnp_IS1 PF03811.13 gi|300710729|ref|YP_003736543.1| - 0.013 15.2 0.3 4.8 7.0 0.0 2.1 2 0 0 2 2 2 0 InsA N-terminal domain DUF983 PF06170.12 gi|300710729|ref|YP_003736543.1| - 0.021 15.2 0.5 0.95 9.9 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF983) zf-LITAF-like PF10601.9 gi|300710729|ref|YP_003736543.1| - 0.024 14.9 0.7 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|300710729|ref|YP_003736543.1| - 0.028 14.4 2.8 0.043 13.8 2.8 1.3 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|300710729|ref|YP_003736543.1| - 0.039 13.7 1.0 0.39 10.4 0.0 2.0 1 1 1 2 2 2 0 Ribosomal protein S27 Rubredoxin_2 PF18073.1 gi|300710729|ref|YP_003736543.1| - 0.053 13.2 4.1 0.8 9.5 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zinc_ribbon_5 PF13719.6 gi|300710729|ref|YP_003736543.1| - 0.057 13.2 1.7 2.2 8.1 1.8 2.3 1 1 1 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|300710729|ref|YP_003736543.1| - 0.057 13.3 1.6 0.41 10.5 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) CpXC PF14353.6 gi|300710729|ref|YP_003736543.1| - 0.07 13.2 1.8 9 6.4 1.8 2.1 1 1 0 1 1 1 0 CpXC protein TerY_C PF15616.6 gi|300710729|ref|YP_003736543.1| - 0.072 13.2 0.1 0.075 13.1 0.1 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain zf-C4_Topoisom PF01396.19 gi|300710729|ref|YP_003736543.1| - 0.073 12.9 0.8 1.1 9.1 0.1 2.1 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn_ribbon_SprT PF17283.2 gi|300710729|ref|YP_003736543.1| - 0.084 12.8 2.6 3.8 7.5 0.3 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DUF1272 PF06906.11 gi|300710729|ref|YP_003736543.1| - 0.11 12.7 1.5 7.6 6.7 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zf-Mss51 PF13824.6 gi|300710729|ref|YP_003736543.1| - 0.15 12.1 3.9 5.3 7.2 3.9 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF3797 PF12677.7 gi|300710729|ref|YP_003736543.1| - 0.16 11.9 3.6 5.8 6.9 0.1 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF3797) HypA PF01155.19 gi|300710729|ref|YP_003736543.1| - 0.2 11.7 0.5 0.37 10.8 0.5 1.5 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_ligase_ZBD PF03119.16 gi|300710729|ref|YP_003736543.1| - 0.31 11.1 5.3 4.6 7.4 0.8 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ISL3 PF14690.6 gi|300710729|ref|YP_003736543.1| - 0.31 11.7 3.8 3.9 8.2 0.1 2.1 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-IS66 PF13005.7 gi|300710729|ref|YP_003736543.1| - 0.61 10.5 5.0 3.9 8.0 0.4 2.2 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 UPF0547 PF10571.9 gi|300710729|ref|YP_003736543.1| - 3.4 7.8 7.7 6.6 6.9 1.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 MFS_1 PF07690.16 gi|300710730|ref|YP_003736544.1| - 5.4e-62 209.8 85.9 7.2e-46 156.7 53.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|300710730|ref|YP_003736544.1| - 1e-06 27.9 20.4 0.00028 19.9 8.4 2.4 2 1 0 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 gi|300710730|ref|YP_003736544.1| - 1e-05 25.0 34.9 1.3e-05 24.7 34.9 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Cob_adeno_trans PF01923.18 gi|300710731|ref|YP_003736545.1| - 1.3e-56 191.2 0.0 1.5e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Adenine_deam_C PF13382.6 gi|300710732|ref|YP_003736546.1| - 1.5e-39 135.0 0.0 7.8e-39 132.7 0.0 2.0 2 0 0 2 2 2 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|300710732|ref|YP_003736546.1| - 1.4e-20 73.9 0.1 7.3e-20 71.6 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|300710732|ref|YP_003736546.1| - 1.4e-16 61.1 6.1 9.1e-08 32.0 1.5 3.0 1 1 1 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.21 gi|300710732|ref|YP_003736546.1| - 0.075 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 TatD related DNase MCPsignal PF00015.21 gi|300710733|ref|YP_003736547.1| - 3e-40 137.9 38.8 1.2e-37 129.4 23.7 3.0 1 1 1 2 2 2 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_4 PF08448.10 gi|300710733|ref|YP_003736547.1| - 2.5e-09 37.3 1.0 2.5e-09 37.3 1.0 3.6 3 2 1 4 4 3 1 PAS fold PAS PF00989.25 gi|300710733|ref|YP_003736547.1| - 3.2e-09 36.8 0.0 1e-08 35.2 0.0 1.9 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|300710733|ref|YP_003736547.1| - 4.2e-08 33.4 0.0 1.8e-07 31.3 0.0 2.1 2 0 0 2 2 1 1 PAS domain DUF948 PF06103.11 gi|300710733|ref|YP_003736547.1| - 4.3e-06 26.9 28.1 0.018 15.3 1.8 5.3 3 1 1 4 4 4 3 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 gi|300710733|ref|YP_003736547.1| - 9.3e-05 21.8 20.3 0.013 14.9 6.6 3.2 2 1 1 3 3 3 3 Protein of unknown function (DUF3450) MLTR_LBD PF17765.1 gi|300710733|ref|YP_003736547.1| - 0.0014 18.8 0.0 0.0014 18.8 0.0 3.3 3 1 0 3 3 2 1 MmyB-like transcription regulator ligand binding domain PAS_7 PF12860.7 gi|300710733|ref|YP_003736547.1| - 0.0045 17.1 4.8 0.0057 16.8 0.1 3.5 3 2 1 4 4 4 1 PAS fold PAS_8 PF13188.7 gi|300710733|ref|YP_003736547.1| - 0.0049 16.9 0.0 0.021 14.8 0.0 2.1 1 0 0 1 1 1 1 PAS domain Med30 PF11315.8 gi|300710733|ref|YP_003736547.1| - 0.011 15.9 1.8 0.1 12.8 0.2 2.7 3 1 0 3 3 2 0 Mediator complex subunit 30 Kre28 PF17097.5 gi|300710733|ref|YP_003736547.1| - 0.016 14.2 11.9 0.015 14.3 5.6 2.8 1 1 1 2 2 2 0 Spindle pole body component DUF1664 PF07889.12 gi|300710733|ref|YP_003736547.1| - 0.024 14.7 18.0 0.72 9.9 0.2 4.3 2 2 2 4 4 4 0 Protein of unknown function (DUF1664) RmuC PF02646.16 gi|300710733|ref|YP_003736547.1| - 0.047 12.8 9.5 3.1 6.9 0.2 4.7 2 2 3 5 5 5 0 RmuC family Syntaxin-6_N PF09177.11 gi|300710733|ref|YP_003736547.1| - 0.059 13.9 17.1 0.068 13.7 1.3 3.8 2 2 2 4 4 4 0 Syntaxin 6, N-terminal Spc7 PF08317.11 gi|300710733|ref|YP_003736547.1| - 0.075 11.9 13.6 0.77 8.6 5.2 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF463 PF04317.12 gi|300710733|ref|YP_003736547.1| - 0.08 11.9 1.3 0.16 10.9 1.3 1.4 1 0 0 1 1 1 0 YcjX-like family, DUF463 AAA_13 PF13166.6 gi|300710733|ref|YP_003736547.1| - 0.1 11.2 17.5 0.021 13.5 2.9 2.0 1 1 1 2 2 2 0 AAA domain Ufd2P_core PF10408.9 gi|300710733|ref|YP_003736547.1| - 0.22 10.1 0.5 0.36 9.4 0.5 1.3 1 0 0 1 1 1 0 Ubiquitin elongating factor core Fib_alpha PF08702.10 gi|300710733|ref|YP_003736547.1| - 0.51 10.5 6.6 11 6.2 2.5 3.1 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family CheZ PF04344.13 gi|300710733|ref|YP_003736547.1| - 0.64 9.9 18.1 0.21 11.5 5.5 3.0 1 1 2 3 3 3 0 Chemotaxis phosphatase, CheZ T3SSipB PF16535.5 gi|300710733|ref|YP_003736547.1| - 0.65 10.5 26.4 0.094 13.2 5.1 3.8 1 1 1 3 3 3 0 Type III cell invasion protein SipB Laminin_II PF06009.12 gi|300710733|ref|YP_003736547.1| - 1.2 9.2 24.6 0.86 9.6 4.0 4.0 3 2 1 4 4 3 0 Laminin Domain II IFT57 PF10498.9 gi|300710733|ref|YP_003736547.1| - 1.2 8.0 9.2 3.6 6.5 3.2 2.5 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 TPR_MLP1_2 PF07926.12 gi|300710733|ref|YP_003736547.1| - 1.2 9.2 19.6 3.1 7.9 4.6 2.9 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Cauli_DNA-bind PF03310.13 gi|300710733|ref|YP_003736547.1| - 1.4 9.0 11.2 0.18 11.8 3.4 3.1 2 2 1 3 3 3 0 Caulimovirus DNA-binding protein Spectrin PF00435.21 gi|300710733|ref|YP_003736547.1| - 1.8 9.1 13.4 31 5.1 0.3 4.3 2 2 2 4 4 4 0 Spectrin repeat TMPIT PF07851.13 gi|300710733|ref|YP_003736547.1| - 3.1 6.9 4.9 26 3.9 0.1 2.8 2 1 1 3 3 3 0 TMPIT-like protein DASH_Duo1 PF08651.10 gi|300710733|ref|YP_003736547.1| - 4.1 7.2 6.3 35 4.2 0.0 4.4 5 0 0 5 5 4 0 DASH complex subunit Duo1 HAP1_N PF04849.13 gi|300710733|ref|YP_003736547.1| - 6.4 5.9 13.3 26 3.9 10.0 3.1 1 1 0 2 2 2 0 HAP1 N-terminal conserved region GAS PF13851.6 gi|300710733|ref|YP_003736547.1| - 6.5 6.0 6.9 8.8 5.6 2.1 3.0 1 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding FUSC PF04632.12 gi|300710733|ref|YP_003736547.1| - 7.4 5.0 24.1 3.9 5.9 1.8 2.8 1 1 1 2 2 2 0 Fusaric acid resistance protein family GCN5L1 PF06320.13 gi|300710733|ref|YP_003736547.1| - 7.9 6.7 7.7 5.3 7.2 1.6 2.9 2 1 0 2 2 2 0 GCN5-like protein 1 (GCN5L1) Mod_r PF07200.13 gi|300710733|ref|YP_003736547.1| - 8.3 6.5 9.4 20 5.3 1.4 3.3 2 2 2 4 4 4 0 Modifier of rudimentary (Mod(r)) protein SOUL PF04832.12 gi|300710735|ref|YP_003736549.1| - 7.7e-43 146.6 0.2 4.5e-41 140.8 0.2 2.0 1 1 0 1 1 1 1 SOUL heme-binding protein Acetyltransf_1 PF00583.25 gi|300710736|ref|YP_003736550.1| - 9.3e-18 64.6 0.2 1.9e-17 63.6 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300710736|ref|YP_003736550.1| - 1.4e-11 44.6 0.1 3.2e-11 43.5 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300710736|ref|YP_003736550.1| - 3.9e-11 43.0 0.1 6.6e-11 42.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300710736|ref|YP_003736550.1| - 1.8e-08 34.2 0.0 3.5e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|300710736|ref|YP_003736550.1| - 1.6e-07 31.6 0.0 2.4e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|300710736|ref|YP_003736550.1| - 2.3e-05 24.6 1.5 5.7e-05 23.3 0.3 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300710736|ref|YP_003736550.1| - 9.5e-05 22.5 0.4 0.00033 20.7 0.4 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|300710736|ref|YP_003736550.1| - 0.00016 22.4 0.3 0.00033 21.3 0.1 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300710736|ref|YP_003736550.1| - 0.01 16.0 0.0 0.023 14.8 0.0 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Apocytochr_F_N PF16639.5 gi|300710736|ref|YP_003736550.1| - 0.064 13.5 0.2 0.14 12.5 0.2 1.5 1 0 0 1 1 1 0 Apocytochrome F, N-terminal Fox-1_C PF12414.8 gi|300710736|ref|YP_003736550.1| - 0.11 12.9 0.3 0.49 10.8 0.0 2.0 1 1 1 2 2 2 0 Calcitonin gene-related peptide regulator C terminal Prim_Zn_Ribbon PF08273.12 gi|300710736|ref|YP_003736550.1| - 2.3 8.6 8.2 2.4 8.5 0.3 2.9 2 1 1 3 3 3 0 Zinc-binding domain of primase-helicase PALP PF00291.25 gi|300710737|ref|YP_003736551.1| - 3.9e-70 236.6 3.9 4.5e-70 236.4 3.9 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme zf-C2H2_11 PF16622.5 gi|300710737|ref|YP_003736551.1| - 0.097 12.5 0.1 0.26 11.1 0.1 1.8 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2HC_2 PF13913.6 gi|300710737|ref|YP_003736551.1| - 0.11 12.5 0.5 0.24 11.4 0.5 1.6 1 0 0 1 1 1 0 zinc-finger of a C2HC-type GCS2 PF04107.13 gi|300710738|ref|YP_003736552.1| - 5.2e-12 45.7 0.3 1.2e-11 44.5 0.1 1.7 2 1 0 2 2 2 1 Glutamate-cysteine ligase family 2(GCS2) Hydrolase PF00702.26 gi|300710738|ref|YP_003736552.1| - 0.14 12.5 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase CoA_binding PF02629.19 gi|300710739|ref|YP_003736553.1| - 3e-25 88.7 2.1 3.5e-25 88.5 0.4 2.1 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 gi|300710739|ref|YP_003736553.1| - 1.3e-13 51.1 0.6 2.7e-13 50.0 0.6 1.5 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|300710739|ref|YP_003736553.1| - 3.1e-10 40.0 0.0 4.7e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|300710739|ref|YP_003736553.1| - 2.4e-05 24.8 0.0 0.00083 19.8 0.0 2.3 2 0 0 2 2 2 1 CoA binding domain IlvN PF07991.12 gi|300710739|ref|YP_003736553.1| - 0.0031 17.1 0.1 0.0052 16.4 0.1 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain ATP-grasp_2 PF08442.10 gi|300710740|ref|YP_003736554.1| - 1.1e-62 211.2 0.1 1.8e-62 210.5 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|300710740|ref|YP_003736554.1| - 6.4e-20 71.6 5.6 1.8e-19 70.1 2.2 2.5 2 1 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|300710740|ref|YP_003736554.1| - 1.1e-13 51.2 0.6 3e-13 49.9 0.6 1.6 1 0 0 1 1 1 1 CoA-ligase CPSase_L_D2 PF02786.17 gi|300710740|ref|YP_003736554.1| - 2.2e-13 50.2 2.0 1.2e-10 41.3 0.4 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|300710740|ref|YP_003736554.1| - 5.4e-09 35.8 0.2 2.3e-08 33.8 0.1 2.0 2 0 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|300710740|ref|YP_003736554.1| - 8.9e-07 28.9 2.0 1.3e-06 28.3 0.2 2.0 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Succ_CoA_lig PF13607.6 gi|300710740|ref|YP_003736554.1| - 0.053 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain DUF2270 PF10028.9 gi|300710741|ref|YP_003736555.1| - 1.1e-67 227.1 0.8 1.4e-67 226.9 0.8 1.0 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2270) DUF4131 PF13567.6 gi|300710741|ref|YP_003736555.1| - 0.048 13.3 4.7 1.8 8.2 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) ABC_tran PF00005.27 gi|300710742|ref|YP_003736556.1| - 7.2e-32 110.8 0.0 1.2e-31 110.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710742|ref|YP_003736556.1| - 2.2e-14 54.0 2.6 2.6e-09 37.3 0.1 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|300710742|ref|YP_003736556.1| - 3.9e-08 33.9 0.0 2.4e-07 31.4 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_30 PF13604.6 gi|300710742|ref|YP_003736556.1| - 0.0027 17.5 0.1 0.012 15.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|300710742|ref|YP_003736556.1| - 0.0038 17.0 0.0 1.1 8.9 0.0 2.2 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_23 PF13476.6 gi|300710742|ref|YP_003736556.1| - 0.0097 16.4 0.0 0.015 15.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300710742|ref|YP_003736556.1| - 0.018 14.9 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase MobB PF03205.14 gi|300710742|ref|YP_003736556.1| - 0.022 14.7 0.0 0.051 13.5 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_15 PF13175.6 gi|300710742|ref|YP_003736556.1| - 0.028 14.1 0.0 7.9 6.1 0.1 2.2 1 1 1 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 gi|300710742|ref|YP_003736556.1| - 0.029 13.8 0.0 2.6 7.4 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 gi|300710742|ref|YP_003736556.1| - 0.043 13.4 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 gi|300710742|ref|YP_003736556.1| - 0.047 13.4 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|300710742|ref|YP_003736556.1| - 0.085 12.6 0.1 0.54 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|300710742|ref|YP_003736556.1| - 0.086 12.4 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 gi|300710742|ref|YP_003736556.1| - 0.092 11.8 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 gi|300710742|ref|YP_003736556.1| - 0.093 12.8 0.4 0.21 11.7 0.1 1.7 2 0 0 2 2 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|300710742|ref|YP_003736556.1| - 0.11 12.4 0.5 0.81 9.6 0.0 2.2 2 1 0 2 2 2 0 NTPase CLP1_P PF16575.5 gi|300710742|ref|YP_003736556.1| - 0.12 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ATP_bind_1 PF03029.17 gi|300710742|ref|YP_003736556.1| - 0.16 11.7 0.1 0.36 10.6 0.1 1.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ABC2_membrane PF01061.24 gi|300710743|ref|YP_003736557.1| - 8.2e-06 25.4 1.6 9.4e-06 25.2 1.6 1.0 1 0 0 1 1 1 1 ABC-2 type transporter CsgA PF17334.2 gi|300710744|ref|YP_003736558.1| - 0.0016 19.2 1.2 0.0016 19.2 1.2 1.5 2 0 0 2 2 2 1 Minor curli fiber component A LGT PF01790.18 gi|300710745|ref|YP_003736559.1| - 0.04 13.1 3.8 0.057 12.7 3.8 1.2 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase DUF4212 PF13937.6 gi|300710745|ref|YP_003736559.1| - 3.4 8.1 0.0 3.4 8.1 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4212) SWIM PF04434.17 gi|300710746|ref|YP_003736560.1| - 1.3e-05 24.7 0.7 1.3e-05 24.7 0.7 2.2 2 0 0 2 2 2 1 SWIM zinc finger Phage_integrase PF00589.22 gi|300710747|ref|YP_003736561.1| - 5.4e-29 101.2 0.0 6.6e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Angiomotin_C PF12240.8 gi|300710748|ref|YP_003736562.1| - 0.0066 16.0 1.1 0.0094 15.5 1.1 1.4 1 1 0 1 1 1 1 Angiomotin C terminal BLOC1_2 PF10046.9 gi|300710748|ref|YP_003736562.1| - 0.01 16.1 0.8 0.077 13.3 0.2 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin-6_N PF09177.11 gi|300710748|ref|YP_003736562.1| - 0.015 15.8 2.0 0.19 12.3 2.0 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal CHDCT2 PF08074.11 gi|300710748|ref|YP_003736562.1| - 0.099 12.8 0.8 0.25 11.5 0.5 1.7 2 0 0 2 2 2 0 CHDCT2 (NUC038) domain ABC2_membrane PF01061.24 gi|300710749|ref|YP_003736563.1| - 5.1e-23 81.6 12.8 7.9e-23 81.0 12.8 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|300710749|ref|YP_003736563.1| - 1.2e-06 27.9 13.8 1.5e-06 27.6 13.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Peptidase_A24 PF01478.18 gi|300710749|ref|YP_003736563.1| - 3.4 8.1 15.0 0.23 11.9 6.0 2.3 1 1 1 2 2 2 0 Type IV leader peptidase family ADH_zinc_N_2 PF13602.6 gi|300710750|ref|YP_003736564.1| - 1.3e-16 61.8 0.1 2.1e-16 61.2 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|300710750|ref|YP_003736564.1| - 1.3e-11 44.6 0.1 2.1e-11 43.9 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|300710750|ref|YP_003736564.1| - 7.7e-11 41.9 0.1 7.2e-09 35.5 0.0 2.6 2 1 1 3 3 3 1 Alcohol dehydrogenase GroES-like domain Oxidored_nitro PF00148.19 gi|300710750|ref|YP_003736564.1| - 0.035 12.9 0.2 0.054 12.2 0.2 1.3 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase YAcAr PF10686.9 gi|300710750|ref|YP_003736564.1| - 0.11 12.5 1.0 0.23 11.4 1.0 1.5 1 0 0 1 1 1 0 YspA, cpYpsA-related SLOG family adh_short PF00106.25 gi|300710750|ref|YP_003736564.1| - 0.11 12.0 0.2 0.21 11.1 0.2 1.5 1 0 0 1 1 1 0 short chain dehydrogenase HalOD1 PF18545.1 gi|300710751|ref|YP_003736565.1| - 5.5e-17 61.8 2.5 7.8e-17 61.3 2.5 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 CMAS PF02353.20 gi|300710752|ref|YP_003736566.1| - 0.057 12.7 0.0 8.5 5.6 0.0 2.1 1 1 1 2 2 2 0 Mycolic acid cyclopropane synthetase adh_short PF00106.25 gi|300710753|ref|YP_003736567.1| - 3.9e-40 137.4 0.0 4.7e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300710753|ref|YP_003736567.1| - 1.3e-39 136.2 0.0 4.5e-39 134.4 0.0 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 gi|300710753|ref|YP_003736567.1| - 2.1e-09 37.2 0.1 1.1e-08 34.9 0.1 2.2 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family KR PF08659.10 gi|300710753|ref|YP_003736567.1| - 3.9e-07 30.2 0.1 4.1e-06 26.8 0.1 2.0 1 1 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 gi|300710753|ref|YP_003736567.1| - 6.2e-06 25.8 0.0 1.5e-05 24.6 0.0 1.6 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|300710753|ref|YP_003736567.1| - 2.6e-05 23.4 0.1 3.6e-05 22.9 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|300710753|ref|YP_003736567.1| - 0.0051 15.9 0.0 0.0073 15.4 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 gi|300710753|ref|YP_003736567.1| - 0.018 14.9 0.3 0.036 14.0 0.3 1.5 1 0 0 1 1 1 0 NAD(P)H-binding MoeA_C PF03454.15 gi|300710753|ref|YP_003736567.1| - 0.031 14.5 0.1 0.21 11.8 0.0 2.3 3 0 0 3 3 3 0 MoeA C-terminal region (domain IV) NmrA PF05368.13 gi|300710753|ref|YP_003736567.1| - 0.11 12.0 0.1 0.21 11.1 0.1 1.4 1 0 0 1 1 1 0 NmrA-like family SNF PF00209.18 gi|300710755|ref|YP_003736569.1| - 3.6e-59 200.9 26.7 2.6e-30 105.6 15.2 2.1 2 0 0 2 2 2 2 Sodium:neurotransmitter symporter family Carboxyl_trans PF01039.22 gi|300710756|ref|YP_003736570.1| - 1.3e-196 654.1 0.1 1.5e-196 653.9 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|300710756|ref|YP_003736570.1| - 0.00083 18.9 0.0 0.0019 17.8 0.0 1.5 2 0 0 2 2 2 1 Malonate decarboxylase gamma subunit (MdcE) CPSase_L_D2 PF02786.17 gi|300710758|ref|YP_003736572.1| - 7e-71 238.1 0.1 1.8e-70 236.8 0.1 1.7 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|300710758|ref|YP_003736572.1| - 2.1e-45 153.8 1.4 1.1e-44 151.4 0.3 2.6 3 0 0 3 3 3 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|300710758|ref|YP_003736572.1| - 2e-35 121.2 0.0 4.3e-35 120.1 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 gi|300710758|ref|YP_003736572.1| - 1.1e-16 60.4 9.0 1.2e-16 60.3 6.5 2.3 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|300710758|ref|YP_003736572.1| - 3.2e-10 39.7 1.5 9.5e-05 22.2 0.0 2.7 1 1 1 2 2 2 2 Biotin-lipoyl like ATP-grasp PF02222.22 gi|300710758|ref|YP_003736572.1| - 3.1e-06 26.9 0.0 5.5e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|300710758|ref|YP_003736572.1| - 4.4e-06 26.6 0.0 7.6e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dala_Dala_lig_C PF07478.13 gi|300710758|ref|YP_003736572.1| - 4.4e-05 23.1 0.0 8.9e-05 22.1 0.0 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus HlyD_3 PF13437.6 gi|300710758|ref|YP_003736572.1| - 0.0063 17.2 1.1 5.5 7.8 0.0 2.7 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|300710758|ref|YP_003736572.1| - 0.009 15.2 1.3 0.99 8.6 0.1 2.4 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion ATP-grasp_3 PF02655.14 gi|300710758|ref|YP_003736572.1| - 0.0093 16.0 0.0 0.024 14.7 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|300710758|ref|YP_003736572.1| - 0.014 14.7 0.0 0.025 13.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp GCV_H PF01597.19 gi|300710758|ref|YP_003736572.1| - 0.026 14.4 1.1 0.08 12.8 1.1 1.8 1 0 0 1 1 1 0 Glycine cleavage H-protein RnfC_N PF13375.6 gi|300710758|ref|YP_003736572.1| - 0.053 13.5 0.6 0.42 10.6 0.7 2.4 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain PTS_EIIA_1 PF00358.20 gi|300710758|ref|YP_003736572.1| - 0.08 12.7 1.0 0.89 9.3 0.1 2.6 2 1 1 3 3 3 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BPL_LplA_LipB PF03099.19 gi|300710759|ref|YP_003736573.1| - 3.8e-14 52.7 0.0 5.1e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|300710759|ref|YP_003736573.1| - 2.2e-12 46.7 0.0 4.2e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.17 gi|300710759|ref|YP_003736573.1| - 2.2e-10 40.3 0.8 4.4e-10 39.3 0.8 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_20 PF12840.7 gi|300710759|ref|YP_003736573.1| - 2.6e-05 24.2 0.1 0.00012 22.0 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|300710759|ref|YP_003736573.1| - 7.4e-05 22.2 0.0 0.00021 20.8 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300710759|ref|YP_003736573.1| - 0.0096 15.7 0.0 0.028 14.2 0.0 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 gi|300710759|ref|YP_003736573.1| - 0.019 14.7 0.0 0.058 13.2 0.0 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_1 PF00126.27 gi|300710759|ref|YP_003736573.1| - 0.024 14.6 0.0 0.061 13.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family TrmB PF01978.19 gi|300710759|ref|YP_003736573.1| - 0.035 14.0 0.0 0.081 12.8 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300710759|ref|YP_003736573.1| - 0.042 13.7 0.1 0.15 12.0 0.0 2.0 2 0 0 2 2 2 0 MarR family BPL_LplA_LipB_2 PF16917.5 gi|300710759|ref|YP_003736573.1| - 0.048 13.2 0.3 0.085 12.4 0.3 1.5 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family Fe_dep_repress PF01325.19 gi|300710759|ref|YP_003736573.1| - 0.05 13.8 0.0 0.093 13.0 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 gi|300710759|ref|YP_003736573.1| - 0.12 12.2 0.0 0.32 10.8 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain Usp PF00582.26 gi|300710760|ref|YP_003736574.1| - 7e-37 127.1 0.6 7.9e-37 126.9 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|300710760|ref|YP_003736574.1| - 0.069 13.0 3.4 6.9 6.5 2.2 2.7 1 1 1 2 2 2 0 Electron transfer flavoprotein domain Amidohydro_1 PF01979.20 gi|300710761|ref|YP_003736575.1| - 1.8e-32 113.0 0.1 7.5e-30 104.4 0.1 2.5 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|300710761|ref|YP_003736575.1| - 1.6e-09 37.6 0.0 2.1e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|300710761|ref|YP_003736575.1| - 1.1e-08 35.0 7.5 9.1e-06 25.4 2.8 3.5 1 1 1 2 2 2 2 Amidohydrolase family HD PF01966.22 gi|300710762|ref|YP_003736576.1| - 2.3e-09 37.5 4.5 3.1e-09 37.1 3.0 2.2 2 1 0 2 2 2 1 HD domain Amidase PF01425.21 gi|300710764|ref|YP_003736578.1| - 7.7e-71 239.4 0.4 3.3e-69 234.0 0.4 2.7 1 1 0 1 1 1 1 Amidase Se-cys_synth_N PF12390.8 gi|300710764|ref|YP_003736578.1| - 4.3 7.6 6.0 12 6.2 0.1 3.1 3 0 0 3 3 3 0 Selenocysteine synthase N terminal SCFA_trans PF02667.14 gi|300710765|ref|YP_003736579.1| - 2e-126 422.6 15.7 2.2e-126 422.5 15.7 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter ABG_transport PF03806.13 gi|300710765|ref|YP_003736579.1| - 0.00048 18.5 4.2 0.00048 18.5 4.2 1.9 2 0 0 2 2 2 1 AbgT putative transporter family DcuC PF03606.15 gi|300710765|ref|YP_003736579.1| - 0.095 11.1 17.4 0.0085 14.6 9.9 2.8 2 1 0 2 2 2 0 C4-dicarboxylate anaerobic carrier HEAT_EZ PF13513.6 gi|300710766|ref|YP_003736580.1| - 0.12 12.9 1.2 0.2 12.2 0.8 1.7 1 1 0 1 1 1 0 HEAT-like repeat UPF0052 PF01933.18 gi|300710768|ref|YP_003736582.1| - 6e-40 137.3 0.0 7.4e-40 137.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Dus PF01207.17 gi|300710769|ref|YP_003736583.1| - 4e-08 32.7 1.0 3.6e-07 29.6 1.0 2.0 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|300710769|ref|YP_003736583.1| - 6e-05 22.6 2.0 0.0094 15.4 0.2 2.2 1 1 1 2 2 2 2 Histidine biosynthesis protein PEP_mutase PF13714.6 gi|300710769|ref|YP_003736583.1| - 0.00071 19.1 2.4 0.0011 18.4 2.4 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase QRPTase_C PF01729.19 gi|300710769|ref|YP_003736583.1| - 0.0013 18.5 0.3 0.0026 17.6 0.3 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain DUF4272 PF14094.6 gi|300710769|ref|YP_003736583.1| - 0.036 13.3 0.1 0.063 12.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4272) MutS_III PF05192.18 gi|300710769|ref|YP_003736583.1| - 0.039 14.2 0.0 0.053 13.8 0.0 1.3 1 0 0 1 1 1 0 MutS domain III Ribul_P_3_epim PF00834.19 gi|300710769|ref|YP_003736583.1| - 0.13 11.7 0.1 0.39 10.1 0.0 1.9 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family CitG PF01874.16 gi|300710770|ref|YP_003736584.1| - 2.1e-60 204.8 3.4 2.3e-60 204.6 3.4 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.12 gi|300710771|ref|YP_003736585.1| - 9.4e-41 139.5 0.0 1.1e-40 139.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Ribosomal_S17e PF00833.18 gi|300710772|ref|YP_003736586.1| - 1.3e-12 47.7 0.0 1.3e-12 47.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal S17 Semialdhyde_dh PF01118.24 gi|300710773|ref|YP_003736587.1| - 2.6e-34 118.3 0.0 4.9e-34 117.4 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|300710773|ref|YP_003736587.1| - 4.3e-32 111.7 0.0 6.2e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DXP_reductoisom PF02670.16 gi|300710773|ref|YP_003736587.1| - 0.0013 19.4 0.0 0.0028 18.4 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DapB_N PF01113.20 gi|300710773|ref|YP_003736587.1| - 0.0016 18.6 0.0 0.0027 17.8 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Phage_Coat_A PF05357.13 gi|300710773|ref|YP_003736587.1| - 0.037 13.8 0.0 0.083 12.7 0.0 1.5 1 0 0 1 1 1 0 Phage Coat Protein A Gp_dh_C PF02800.20 gi|300710773|ref|YP_003736587.1| - 0.09 12.4 0.0 0.48 10.0 0.0 2.0 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MarR_2 PF12802.7 gi|300710774|ref|YP_003736588.1| - 1.2e-17 63.6 0.0 2.6e-17 62.5 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|300710774|ref|YP_003736588.1| - 2.9e-15 55.9 0.0 4.4e-15 55.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|300710774|ref|YP_003736588.1| - 1.7e-10 41.2 0.1 3.7e-10 40.2 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|300710774|ref|YP_003736588.1| - 1.6e-08 34.3 0.3 3e-08 33.4 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|300710774|ref|YP_003736588.1| - 0.00011 21.7 0.0 0.00028 20.4 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|300710774|ref|YP_003736588.1| - 0.00062 19.5 0.1 0.0016 18.2 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|300710774|ref|YP_003736588.1| - 0.012 15.9 0.0 0.026 14.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HxlR PF01638.17 gi|300710774|ref|YP_003736588.1| - 0.024 14.5 0.1 0.065 13.1 0.1 1.7 1 1 1 2 2 2 0 HxlR-like helix-turn-helix HTH_34 PF13601.6 gi|300710774|ref|YP_003736588.1| - 0.037 14.2 0.0 0.07 13.3 0.0 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain Ribosomal_L13e PF01294.18 gi|300710774|ref|YP_003736588.1| - 0.046 13.6 0.0 0.054 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L13e PadR PF03551.14 gi|300710774|ref|YP_003736588.1| - 0.085 12.8 0.6 0.32 11.0 0.1 2.0 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family LexA_DNA_bind PF01726.16 gi|300710774|ref|YP_003736588.1| - 0.11 12.3 0.0 4.1 7.2 0.0 2.3 2 0 0 2 2 2 0 LexA DNA binding domain Penicillinase_R PF03965.16 gi|300710774|ref|YP_003736588.1| - 0.14 12.5 0.0 0.2 12.0 0.0 1.5 1 1 0 1 1 1 0 Penicillinase repressor B-block_TFIIIC PF04182.12 gi|300710774|ref|YP_003736588.1| - 0.22 11.7 0.0 0.29 11.3 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC MFS_1 PF07690.16 gi|300710775|ref|YP_003736589.1| - 9.7e-53 179.3 59.0 3e-45 154.7 36.9 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|300710775|ref|YP_003736589.1| - 1.7e-05 23.9 25.6 0.00064 18.7 10.9 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_4 PF06779.14 gi|300710775|ref|YP_003736589.1| - 7.7e-05 22.2 32.8 0.00039 19.8 30.9 2.0 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 gi|300710775|ref|YP_003736589.1| - 0.0011 17.9 10.8 0.094 11.6 7.4 2.5 1 1 1 2 2 2 2 MFS_1 like family UNC-93 PF05978.16 gi|300710775|ref|YP_003736589.1| - 0.0085 15.8 0.1 0.0085 15.8 0.1 2.3 2 1 0 2 2 2 1 Ion channel regulatory protein UNC-93 2-Hacid_dh_C PF02826.19 gi|300710776|ref|YP_003736590.1| - 7.5e-50 168.8 0.0 9.9e-50 168.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300710776|ref|YP_003736590.1| - 2e-09 37.2 0.0 2.8e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.17 gi|300710776|ref|YP_003736590.1| - 0.00025 21.6 0.0 0.0005 20.6 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 gi|300710776|ref|YP_003736590.1| - 0.0027 17.1 0.0 0.0042 16.5 0.0 1.3 1 0 0 1 1 1 1 ThiF family IlvN PF07991.12 gi|300710776|ref|YP_003736590.1| - 0.074 12.6 0.0 0.35 10.4 0.0 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|300710776|ref|YP_003736590.1| - 0.18 11.9 0.1 0.51 10.4 0.1 1.8 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Amidohydro_3 PF07969.11 gi|300710777|ref|YP_003736591.1| - 1.3e-19 71.1 3.5 9.9e-13 48.4 0.1 2.5 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|300710777|ref|YP_003736591.1| - 1.8e-17 63.7 0.1 9.2e-17 61.4 0.1 2.0 1 1 0 1 1 1 1 Amidohydrolase family Pyr_redox_2 PF07992.14 gi|300710778|ref|YP_003736592.1| - 2.6e-11 43.3 0.2 6.4e-06 25.6 0.2 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|300710778|ref|YP_003736592.1| - 2.6e-11 43.4 0.4 1e-05 25.0 0.2 2.1 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|300710778|ref|YP_003736592.1| - 1.3e-08 34.9 3.8 0.0015 18.2 0.8 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300710778|ref|YP_003736592.1| - 3e-08 32.8 0.9 6e-05 21.9 1.2 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|300710778|ref|YP_003736592.1| - 5.4e-07 29.0 1.2 9.2e-07 28.3 1.2 1.3 1 0 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 gi|300710778|ref|YP_003736592.1| - 9.9e-07 27.9 0.2 8.9e-05 21.5 0.0 2.1 2 0 0 2 2 2 1 Tryptophan halogenase FAD_oxidored PF12831.7 gi|300710778|ref|YP_003736592.1| - 3.4e-06 26.7 3.1 5.5e-06 26.0 3.1 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|300710778|ref|YP_003736592.1| - 6.9e-05 23.0 0.1 0.00018 21.6 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|300710778|ref|YP_003736592.1| - 0.00013 21.2 0.1 0.002 17.3 0.1 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|300710778|ref|YP_003736592.1| - 0.00043 19.6 0.5 0.0014 17.9 0.8 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|300710778|ref|YP_003736592.1| - 0.0024 17.2 0.1 0.0038 16.5 0.1 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|300710778|ref|YP_003736592.1| - 0.0078 16.8 0.1 0.18 12.4 0.1 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300710778|ref|YP_003736592.1| - 0.009 16.0 0.8 2.6 8.0 0.3 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|300710778|ref|YP_003736592.1| - 0.016 14.3 0.0 0.26 10.3 0.1 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein TAT_signal PF10518.9 gi|300710779|ref|YP_003736593.1| - 0.00064 19.4 0.1 0.00064 19.4 0.1 1.8 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence Dyp_perox PF04261.12 gi|300710779|ref|YP_003736593.1| - 0.0011 18.0 0.0 0.081 11.9 0.1 2.6 2 1 0 2 2 2 2 Dyp-type peroxidase family Histidinol_dh PF00815.20 gi|300710781|ref|YP_003736595.1| - 2.6e-156 520.8 4.7 3.1e-156 520.5 4.7 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DUF5130 PF17174.4 gi|300710781|ref|YP_003736595.1| - 0.49 10.6 8.9 0.071 13.3 2.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5130) SHOCT PF09851.9 gi|300710782|ref|YP_003736596.1| - 5.1e-12 45.1 0.6 8.8e-12 44.4 0.6 1.4 1 0 0 1 1 1 1 Short C-terminal domain DUF1707 PF08044.11 gi|300710782|ref|YP_003736596.1| - 0.00023 21.2 2.1 0.00023 21.2 2.1 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF1707) GvpG PF05120.12 gi|300710782|ref|YP_003736596.1| - 0.0018 18.3 1.9 0.0022 18.0 1.9 1.3 1 1 0 1 1 1 1 Gas vesicle protein G DUF4395 PF14340.6 gi|300710782|ref|YP_003736596.1| - 0.03 14.6 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4395) Oleosin PF01277.17 gi|300710782|ref|YP_003736596.1| - 3.1 7.6 9.5 5.5 6.8 9.5 1.6 1 1 0 1 1 1 0 Oleosin Fe-S_biosyn PF01521.20 gi|300710783|ref|YP_003736597.1| - 4.6e-19 68.6 0.0 5.2e-19 68.5 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Dodecin PF07311.12 gi|300710784|ref|YP_003736598.1| - 5.9e-23 80.9 0.2 6.5e-23 80.8 0.2 1.0 1 0 0 1 1 1 1 Dodecin HTH_10 PF04967.12 gi|300710785|ref|YP_003736599.1| - 0.00044 20.0 0.0 0.00049 19.8 0.0 1.1 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|300710785|ref|YP_003736599.1| - 0.003 17.1 0.0 0.0037 16.8 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_8 PF02954.19 gi|300710785|ref|YP_003736599.1| - 0.0061 16.3 0.1 0.0089 15.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family MarR_2 PF12802.7 gi|300710785|ref|YP_003736599.1| - 0.015 15.1 0.0 0.017 15.0 0.0 1.3 1 1 0 1 1 1 0 MarR family HTH_AsnC-type PF13404.6 gi|300710785|ref|YP_003736599.1| - 0.017 14.9 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Phage_CI_repr PF07022.13 gi|300710785|ref|YP_003736599.1| - 0.05 13.7 0.0 0.05 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|300710785|ref|YP_003736599.1| - 0.074 12.9 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 gi|300710785|ref|YP_003736599.1| - 0.1 12.7 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix PAP2_3 PF14378.6 gi|300710786|ref|YP_003736600.1| - 1.7e-17 63.7 17.1 1.7e-17 63.7 17.1 1.9 2 0 0 2 2 2 1 PAP2 superfamily PAP2 PF01569.21 gi|300710786|ref|YP_003736600.1| - 1.5e-12 47.5 6.4 1.5e-12 47.5 6.4 2.6 2 2 1 3 3 3 1 PAP2 superfamily Pox_A14 PF05767.12 gi|300710786|ref|YP_003736600.1| - 0.028 14.6 0.3 0.028 14.6 0.3 2.3 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 SBP_bac_5 PF00496.22 gi|300710787|ref|YP_003736601.1| - 2.9e-49 168.0 0.0 4e-44 151.1 0.0 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle TF_Zn_Ribbon PF08271.12 gi|300710789|ref|YP_003736603.1| - 0.045 13.3 1.4 0.074 12.6 1.4 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_6 PF14599.6 gi|300710789|ref|YP_003736603.1| - 0.049 13.7 6.0 0.39 10.8 0.2 2.2 1 1 1 2 2 2 0 Zinc-ribbon Polysacc_deac_1 PF01522.21 gi|300710790|ref|YP_003736604.1| - 8.5e-13 48.3 0.7 7e-11 42.1 0.1 2.6 3 0 0 3 3 3 2 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300710790|ref|YP_003736604.1| - 0.012 15.3 0.0 0.061 13.0 0.0 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Usp PF00582.26 gi|300710791|ref|YP_003736605.1| - 6e-10 39.8 2.8 1.4e-07 32.1 2.8 2.1 1 1 0 1 1 1 1 Universal stress protein family DUF2492 PF10678.9 gi|300710791|ref|YP_003736605.1| - 0.076 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) MS_channel PF00924.18 gi|300710792|ref|YP_003736606.1| - 5.4e-35 120.8 0.1 7.8e-35 120.3 0.1 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel Colicin_V PF02674.16 gi|300710792|ref|YP_003736606.1| - 0.0011 18.9 9.3 0.0023 17.9 9.1 1.6 1 1 0 1 1 1 1 Colicin V production protein TM_helix PF05552.12 gi|300710792|ref|YP_003736606.1| - 0.0022 17.9 1.8 0.0022 17.9 1.8 2.8 2 1 1 3 3 3 1 Conserved TM helix EI24 PF07264.11 gi|300710792|ref|YP_003736606.1| - 0.017 15.4 4.5 0.095 12.9 4.5 1.9 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) NDUF_B12 PF08122.12 gi|300710792|ref|YP_003736606.1| - 0.095 12.8 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family DUF2523 PF10734.9 gi|300710792|ref|YP_003736606.1| - 0.11 13.0 6.2 0.24 12.0 5.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2523) DUF2456 PF10445.9 gi|300710792|ref|YP_003736606.1| - 5.5 7.1 9.3 0.82 9.8 0.2 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2456) PAC2 PF09754.9 gi|300710793|ref|YP_003736607.1| - 5.8e-32 111.4 0.0 6.7e-32 111.2 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Regulator_TrmB PF11495.8 gi|300710794|ref|YP_003736608.1| - 6.2e-67 225.2 0.2 1e-66 224.5 0.2 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|300710794|ref|YP_003736608.1| - 3.5e-20 71.7 0.0 7.4e-20 70.6 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|300710794|ref|YP_003736608.1| - 7.7e-07 29.1 0.2 8.3e-06 25.8 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300710794|ref|YP_003736608.1| - 1.3e-06 28.2 0.0 3.2e-06 26.9 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300710794|ref|YP_003736608.1| - 4.6e-05 23.1 0.0 0.00012 21.8 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|300710794|ref|YP_003736608.1| - 0.0003 20.3 0.0 0.0017 17.8 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300710794|ref|YP_003736608.1| - 0.00033 20.4 0.0 0.021 14.7 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_CodY PF08222.11 gi|300710794|ref|YP_003736608.1| - 0.005 16.4 0.2 0.016 14.7 0.0 1.9 2 0 0 2 2 2 1 CodY helix-turn-helix domain Rrf2 PF02082.20 gi|300710794|ref|YP_003736608.1| - 0.0064 16.8 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.11 gi|300710794|ref|YP_003736608.1| - 0.026 14.6 0.0 0.19 11.9 0.0 2.1 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Sigma70_r4 PF04545.16 gi|300710794|ref|YP_003736608.1| - 0.029 13.9 0.1 0.57 9.8 0.0 2.8 2 1 0 2 2 2 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|300710794|ref|YP_003736608.1| - 0.039 13.9 0.0 0.089 12.8 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 gi|300710794|ref|YP_003736608.1| - 0.044 13.7 0.0 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 MarR family DUF190 PF02641.15 gi|300710794|ref|YP_003736608.1| - 0.058 13.7 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized ACR, COG1993 HTH_37 PF13744.6 gi|300710794|ref|YP_003736608.1| - 0.1 12.5 0.0 0.35 10.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|300710794|ref|YP_003736608.1| - 0.12 12.5 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4177 PF13783.6 gi|300710795|ref|YP_003736609.1| - 2.4e-06 27.7 0.0 3.1e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) Aldo_ket_red PF00248.21 gi|300710797|ref|YP_003736611.1| - 3.6e-82 275.9 0.0 4.4e-82 275.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF4130 PF13566.6 gi|300710797|ref|YP_003736611.1| - 0.18 11.8 0.0 0.6 10.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4130 Regulator_TrmB PF11495.8 gi|300710798|ref|YP_003736612.1| - 3.1e-57 193.4 0.0 4e-57 193.1 0.0 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|300710798|ref|YP_003736612.1| - 2.6e-14 52.9 0.1 6.3e-14 51.6 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300710798|ref|YP_003736612.1| - 0.0005 19.9 0.1 0.0012 18.7 0.1 1.6 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|300710798|ref|YP_003736612.1| - 0.0078 16.2 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family bPH_2 PF03703.14 gi|300710799|ref|YP_003736613.1| - 1.7e-19 69.8 0.4 2.4e-19 69.3 0.4 1.2 1 0 0 1 1 1 1 Bacterial PH domain zf-NADH-PPase PF09297.11 gi|300710800|ref|YP_003736614.1| - 0.022 14.4 1.7 0.15 11.8 0.2 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TackOD1 PF18551.1 gi|300710800|ref|YP_003736614.1| - 0.15 11.7 0.7 0.22 11.2 0.7 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DNA_ligase_ZBD PF03119.16 gi|300710800|ref|YP_003736614.1| - 3.3 7.8 10.7 3.4 7.8 1.2 2.7 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain BPD_transp_1 PF00528.22 gi|300710801|ref|YP_003736615.1| - 2.7e-17 63.1 19.8 2.7e-17 63.1 19.8 2.5 1 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component ThiW PF09512.10 gi|300710801|ref|YP_003736615.1| - 0.085 13.0 12.8 0.3 11.2 5.1 2.4 2 0 0 2 2 2 0 Thiamine-precursor transporter protein (ThiW) BPD_transp_1 PF00528.22 gi|300710802|ref|YP_003736616.1| - 6.1e-13 48.9 16.3 6.1e-13 48.9 16.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component MerT PF02411.15 gi|300710802|ref|YP_003736616.1| - 0.18 11.9 0.2 0.18 11.9 0.2 2.9 3 0 0 3 3 3 0 MerT mercuric transport protein DUF805 PF05656.14 gi|300710802|ref|YP_003736616.1| - 6.2 7.3 12.5 49 4.4 12.5 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF805) ABC_tran PF00005.27 gi|300710803|ref|YP_003736617.1| - 7.1e-33 114.0 0.0 1.1e-32 113.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|300710803|ref|YP_003736617.1| - 5.7e-13 49.5 0.0 1.7e-12 48.0 0.0 1.9 1 0 0 1 1 1 1 MalK OB fold domain AAA_21 PF13304.6 gi|300710803|ref|YP_003736617.1| - 8.3e-07 29.1 0.0 0.0094 15.8 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300710803|ref|YP_003736617.1| - 1.2e-05 24.9 0.2 9.3e-05 22.0 0.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 gi|300710803|ref|YP_003736617.1| - 2.4e-05 24.8 0.6 9.7e-05 22.9 0.1 2.4 3 0 0 3 3 2 1 CysA C-terminal regulatory domain TOBE_2 PF08402.10 gi|300710803|ref|YP_003736617.1| - 5e-05 23.4 1.1 0.011 15.9 0.5 3.0 1 1 1 2 2 2 2 TOBE domain AAA_16 PF13191.6 gi|300710803|ref|YP_003736617.1| - 0.0028 18.1 0.0 0.0064 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|300710803|ref|YP_003736617.1| - 0.0035 17.1 0.0 0.27 10.9 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|300710803|ref|YP_003736617.1| - 0.0052 16.7 0.1 0.018 15.0 0.0 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|300710803|ref|YP_003736617.1| - 0.0081 15.9 0.1 0.034 13.9 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain TOBE PF03459.17 gi|300710803|ref|YP_003736617.1| - 0.016 15.5 0.0 18 5.7 0.1 3.4 2 1 0 2 2 2 0 TOBE domain RNA_helicase PF00910.22 gi|300710803|ref|YP_003736617.1| - 0.02 15.3 0.0 0.083 13.3 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA PF00004.29 gi|300710803|ref|YP_003736617.1| - 0.027 14.9 0.4 0.11 12.9 0.4 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|300710803|ref|YP_003736617.1| - 0.039 13.9 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_5 PF07728.14 gi|300710803|ref|YP_003736617.1| - 0.042 13.8 0.0 0.13 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|300710803|ref|YP_003736617.1| - 0.05 13.9 1.0 0.13 12.5 1.0 1.8 1 1 0 1 1 1 0 AAA domain Arch_flagellin PF01917.16 gi|300710803|ref|YP_003736617.1| - 0.052 13.7 0.2 0.16 12.2 0.0 1.8 2 0 0 2 2 2 0 Archaebacterial flagellin AAA_33 PF13671.6 gi|300710803|ref|YP_003736617.1| - 0.072 13.2 0.2 0.3 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|300710803|ref|YP_003736617.1| - 0.1 12.3 0.1 0.38 10.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|300710803|ref|YP_003736617.1| - 0.13 12.6 1.7 0.52 10.5 1.7 2.1 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|300710803|ref|YP_003736617.1| - 0.16 11.1 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain GFO_IDH_MocA PF01408.22 gi|300710804|ref|YP_003736618.1| - 2.7e-25 89.5 0.0 4.1e-25 88.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|300710804|ref|YP_003736618.1| - 5.4e-07 29.1 0.0 1.1e-06 28.1 0.0 1.5 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300710804|ref|YP_003736618.1| - 7.7e-07 29.6 0.0 1.7e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA_C PF02894.17 gi|300710804|ref|YP_003736618.1| - 1.1e-05 25.5 0.0 2.2e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain IlvN PF07991.12 gi|300710804|ref|YP_003736618.1| - 2.5e-05 23.9 0.0 4.3e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|300710804|ref|YP_003736618.1| - 0.00035 20.8 0.0 0.00095 19.4 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding PF02629.19 gi|300710804|ref|YP_003736618.1| - 0.00047 20.8 0.0 0.00094 19.8 0.0 1.5 1 0 0 1 1 1 1 CoA binding domain HIGH_NTase1 PF05636.11 gi|300710804|ref|YP_003736618.1| - 0.074 12.3 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase TrkA_N PF02254.18 gi|300710804|ref|YP_003736618.1| - 0.087 13.1 0.3 0.53 10.6 0.3 2.2 1 1 0 1 1 1 0 TrkA-N domain ZT_dimer PF16916.5 gi|300710805|ref|YP_003736619.1| - 0.048 13.8 1.2 0.4 10.8 0.1 2.3 2 1 1 3 3 3 0 Dimerisation domain of Zinc Transporter DUF5334 PF17268.2 gi|300710806|ref|YP_003736620.1| - 0.023 15.0 0.3 0.04 14.2 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5334) Big_2 PF02368.18 gi|300710806|ref|YP_003736620.1| - 0.051 13.5 0.1 0.074 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 2) HTH_15 PF12324.8 gi|300710809|ref|YP_003736623.1| - 0.012 15.6 0.1 0.021 14.8 0.1 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase DprA_WH PF17782.1 gi|300710809|ref|YP_003736623.1| - 0.018 15.1 0.1 0.028 14.5 0.1 1.3 1 0 0 1 1 1 0 DprA winged helix domain Sigma70_r3 PF04539.16 gi|300710809|ref|YP_003736623.1| - 0.029 14.5 0.1 0.044 13.9 0.1 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 DUF4423 PF14394.6 gi|300710809|ref|YP_003736623.1| - 0.053 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF1430 PF07242.11 gi|300710811|ref|YP_003736625.1| - 0.028 14.6 5.1 0.034 14.4 5.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) PhageMin_Tail PF10145.9 gi|300710813|ref|YP_003736627.1| - 8.2e-45 153.1 23.8 8.2e-45 153.1 23.8 3.4 2 2 0 3 3 3 1 Phage-related minor tail protein Hema_stalk PF08720.10 gi|300710813|ref|YP_003736627.1| - 0.051 13.3 0.5 0.15 11.7 0.1 2.1 2 0 0 2 2 2 0 Influenza C hemagglutinin stalk Sigma54_CBD PF04963.13 gi|300710813|ref|YP_003736627.1| - 0.059 13.2 0.3 0.17 11.7 0.2 1.7 2 0 0 2 2 2 0 Sigma-54 factor, core binding domain DUF948 PF06103.11 gi|300710813|ref|YP_003736627.1| - 0.28 11.5 6.5 3.5 7.9 0.1 4.5 6 0 0 6 6 6 0 Bacterial protein of unknown function (DUF948) DUF4342 PF14242.6 gi|300710813|ref|YP_003736627.1| - 0.85 9.7 7.1 1.3 9.1 6.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4342) SH3BP5 PF05276.14 gi|300710813|ref|YP_003736627.1| - 2.8 7.7 5.4 32 4.2 1.9 2.8 3 0 0 3 3 3 0 SH3 domain-binding protein 5 (SH3BP5) Prophage_tail PF06605.11 gi|300710814|ref|YP_003736628.1| - 8.6e-08 31.8 0.8 1.9e-07 30.6 0.8 1.6 1 1 0 1 1 1 1 Prophage endopeptidase tail HTH_24 PF13412.6 gi|300710819|ref|YP_003736633.1| - 6.7e-08 32.0 0.5 1.3e-07 31.0 0.5 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300710819|ref|YP_003736633.1| - 4.1e-06 26.6 0.1 7.8e-06 25.7 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300710819|ref|YP_003736633.1| - 3.8e-05 23.6 0.0 0.00012 22.1 0.1 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300710819|ref|YP_003736633.1| - 4e-05 23.3 0.0 9.1e-05 22.2 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|300710819|ref|YP_003736633.1| - 0.00038 20.3 0.0 0.00077 19.3 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|300710819|ref|YP_003736633.1| - 0.0015 18.4 0.1 0.0031 17.4 0.1 1.4 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.9 gi|300710819|ref|YP_003736633.1| - 0.0021 18.1 0.1 0.0071 16.4 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 gi|300710819|ref|YP_003736633.1| - 0.0032 17.3 0.1 0.0087 15.9 0.1 1.7 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_AsnC-type PF13404.6 gi|300710819|ref|YP_003736633.1| - 0.0075 16.1 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_45 PF14947.6 gi|300710819|ref|YP_003736633.1| - 0.011 15.7 0.0 0.04 13.9 0.0 2.0 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_DeoR PF08220.12 gi|300710819|ref|YP_003736633.1| - 0.013 15.2 0.2 0.03 14.1 0.2 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain SgrR_N PF12793.7 gi|300710819|ref|YP_003736633.1| - 0.017 15.4 0.2 0.15 12.3 0.1 2.2 1 1 0 2 2 2 0 Sugar transport-related sRNA regulator N-term TrmB PF01978.19 gi|300710819|ref|YP_003736633.1| - 0.027 14.3 0.0 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|300710819|ref|YP_003736633.1| - 0.032 14.6 0.1 0.11 12.8 0.1 1.8 1 0 0 1 1 1 0 Transcriptional regulator HTH_12 PF08461.10 gi|300710819|ref|YP_003736633.1| - 0.067 13.2 0.2 0.17 11.9 0.2 1.7 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_Crp_2 PF13545.6 gi|300710819|ref|YP_003736633.1| - 0.072 13.1 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|300710819|ref|YP_003736633.1| - 0.087 13.0 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Lpp-LpqN PF10738.9 gi|300710819|ref|YP_003736633.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Probable lipoprotein LpqN Phage_integrase PF00589.22 gi|300710820|ref|YP_003736634.1| - 2.5e-32 112.0 0.9 4.6e-32 111.2 0.9 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|300710820|ref|YP_003736634.1| - 1.7e-09 37.8 0.2 6.9e-09 35.9 0.1 2.1 2 1 1 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|300710820|ref|YP_003736634.1| - 1.2e-07 32.1 0.3 2.7e-07 30.9 0.3 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|300710820|ref|YP_003736634.1| - 0.00024 21.4 0.6 0.002 18.4 0.1 2.4 2 0 0 2 2 2 1 Phage integrase SAM-like domain Tudor-knot PF11717.8 gi|300710820|ref|YP_003736634.1| - 0.0032 17.3 2.3 0.16 11.9 0.7 2.5 2 0 0 2 2 2 1 RNA binding activity-knot of a chromodomain Phage_int_SAM_2 PF12834.7 gi|300710820|ref|YP_003736634.1| - 0.02 15.6 0.1 0.12 13.1 0.0 2.2 3 0 0 3 3 3 0 Phage integrase, N-terminal EDS1_EP PF18117.1 gi|300710820|ref|YP_003736634.1| - 0.022 15.2 1.6 0.14 12.6 0.1 2.5 3 0 0 3 3 3 0 Enhanced disease susceptibility 1 protein EP domain AP_endonuc_2 PF01261.24 gi|300710822|ref|YP_003736636.1| - 5.3e-34 117.5 1.0 8.8e-34 116.8 1.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2_N PF07582.12 gi|300710822|ref|YP_003736636.1| - 1.1e-20 73.0 0.1 2.2e-20 72.1 0.1 1.5 1 0 0 1 1 1 1 AP endonuclease family 2 C terminus ADH_N PF08240.12 gi|300710824|ref|YP_003736638.1| - 6.5e-29 100.0 0.1 1.3e-28 99.1 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|300710824|ref|YP_003736638.1| - 5.7e-17 61.9 0.0 2.2e-12 47.1 0.1 2.3 1 1 1 2 2 2 2 Zinc-binding dehydrogenase ADH_N_assoc PF13823.6 gi|300710824|ref|YP_003736638.1| - 8.3e-08 32.0 0.4 8.3e-08 32.0 0.4 2.4 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated Methyltransf_25 PF13649.6 gi|300710824|ref|YP_003736638.1| - 0.0028 18.3 0.0 0.0046 17.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300710824|ref|YP_003736638.1| - 0.0068 17.0 0.0 0.013 16.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N_2 PF13602.6 gi|300710824|ref|YP_003736638.1| - 0.051 14.6 0.1 0.16 13.0 0.1 1.9 1 1 0 1 1 1 0 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|300710824|ref|YP_003736638.1| - 0.18 11.1 0.0 0.28 10.4 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GFO_IDH_MocA PF01408.22 gi|300710825|ref|YP_003736639.1| - 5.1e-13 49.9 0.0 8.6e-13 49.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|300710825|ref|YP_003736639.1| - 6e-13 48.8 0.0 9.8e-13 48.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain ox_reductase_C PF08635.10 gi|300710825|ref|YP_003736639.1| - 0.035 13.8 0.0 0.1 12.2 0.0 1.7 1 1 0 1 1 1 0 Putative oxidoreductase C terminal domain Abhydrolase_1 PF00561.20 gi|300710826|ref|YP_003736640.1| - 7e-36 124.2 0.0 7.2e-35 120.9 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300710826|ref|YP_003736640.1| - 3.9e-26 93.0 9.7 4.7e-26 92.8 9.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300710826|ref|YP_003736640.1| - 2.3e-16 59.8 0.0 2.9e-15 56.2 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|300710826|ref|YP_003736640.1| - 0.0035 16.9 0.0 1 8.9 0.0 3.0 2 1 0 2 2 2 1 Dienelactone hydrolase family PGAP1 PF07819.13 gi|300710826|ref|YP_003736640.1| - 0.0042 16.8 0.0 0.0062 16.3 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Thioesterase PF00975.20 gi|300710826|ref|YP_003736640.1| - 0.011 15.8 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Chlorophyllase PF07224.11 gi|300710826|ref|YP_003736640.1| - 0.27 10.2 0.0 0.92 8.5 0.0 1.7 1 1 0 1 1 1 0 Chlorophyllase IF-2B PF01008.17 gi|300710827|ref|YP_003736641.1| - 3.2e-45 154.5 0.0 3.7e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family THDPS_N_2 PF14805.6 gi|300710827|ref|YP_003736641.1| - 0.0083 16.3 1.0 0.054 13.7 0.3 2.3 1 1 1 2 2 2 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal AAA_lid_2 PF17863.1 gi|300710827|ref|YP_003736641.1| - 0.018 14.9 2.5 0.28 11.1 0.1 2.8 3 0 0 3 3 3 0 AAA lid domain DUF3323 PF11796.8 gi|300710827|ref|YP_003736641.1| - 0.021 14.7 1.6 0.029 14.3 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) zf-ribbon_3 PF13248.6 gi|300710828|ref|YP_003736642.1| - 0.034 13.6 0.2 0.091 12.2 0.0 1.9 2 0 0 2 2 2 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|300710828|ref|YP_003736642.1| - 0.056 13.1 0.9 0.79 9.5 0.2 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Mu-like_Com PF10122.9 gi|300710828|ref|YP_003736642.1| - 0.073 12.5 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 Mu-like prophage protein Com zinc_ribbon_10 PF10058.9 gi|300710828|ref|YP_003736642.1| - 0.15 11.8 0.1 0.7 9.7 0.1 1.9 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Arg_repressor PF01316.21 gi|300710829|ref|YP_003736643.1| - 0.0015 18.2 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain RtcB PF01139.17 gi|300710830|ref|YP_003736644.1| - 9.7e-157 522.4 0.0 1.1e-156 522.2 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Na_H_Exchanger PF00999.21 gi|300710832|ref|YP_003736646.1| - 5.5e-36 124.2 33.3 6.5e-36 123.9 33.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family YqhR PF11085.8 gi|300710832|ref|YP_003736646.1| - 6 6.8 7.4 5.3 6.9 2.2 2.8 2 0 0 2 2 2 0 Conserved membrane protein YqhR Archease PF01951.16 gi|300710833|ref|YP_003736647.1| - 5e-32 111.0 0.0 5.6e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Acetyltransf_10 PF13673.7 gi|300710834|ref|YP_003736648.1| - 1.2e-13 51.1 0.0 1.7e-13 50.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300710834|ref|YP_003736648.1| - 2.1e-13 50.5 0.7 3e-13 50.0 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300710834|ref|YP_003736648.1| - 9e-12 45.3 0.1 1.2e-11 44.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|300710834|ref|YP_003736648.1| - 1.8e-09 37.4 0.0 3.5e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 gi|300710834|ref|YP_003736648.1| - 0.00053 20.2 0.9 0.00077 19.6 0.9 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|300710834|ref|YP_003736648.1| - 0.0048 17.0 0.0 0.014 15.5 0.0 1.7 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300710834|ref|YP_003736648.1| - 0.0054 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|300710834|ref|YP_003736648.1| - 0.012 15.7 0.0 0.1 12.7 0.0 2.2 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|300710834|ref|YP_003736648.1| - 0.037 13.7 0.0 0.33 10.6 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DNA_primase_S PF01896.19 gi|300710835|ref|YP_003736649.1| - 2.5e-21 76.5 0.0 8.1e-21 74.9 0.0 1.8 1 1 0 1 1 1 1 DNA primase small subunit AraC_N PF06719.13 gi|300710835|ref|YP_003736649.1| - 0.099 12.3 0.0 0.24 11.0 0.0 1.6 1 0 0 1 1 1 0 AraC-type transcriptional regulator N-terminus AAA PF00004.29 gi|300710838|ref|YP_003736652.1| - 9.6e-100 330.2 0.0 1.3e-48 164.7 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|300710838|ref|YP_003736652.1| - 2.6e-30 103.9 4.8 8e-17 60.8 0.3 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|300710838|ref|YP_003736652.1| - 7.5e-23 80.5 0.1 7.1e-22 77.4 0.1 2.6 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|300710838|ref|YP_003736652.1| - 1e-16 61.5 0.0 1.7e-08 34.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|300710838|ref|YP_003736652.1| - 2.3e-16 59.9 0.0 7.1e-08 32.4 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|300710838|ref|YP_003736652.1| - 4.4e-15 56.5 0.2 2e-06 28.3 0.1 4.0 2 2 0 2 2 2 2 AAA ATPase domain CDC48_2 PF02933.17 gi|300710838|ref|YP_003736652.1| - 6.8e-14 51.4 0.4 6.8e-14 51.4 0.4 1.9 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_22 PF13401.6 gi|300710838|ref|YP_003736652.1| - 5.2e-12 46.2 0.2 0.0019 18.5 0.0 3.8 2 2 1 3 3 3 2 AAA domain AAA_5 PF07728.14 gi|300710838|ref|YP_003736652.1| - 5.1e-11 42.7 0.5 0.00058 19.9 0.0 4.5 3 2 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|300710838|ref|YP_003736652.1| - 6.6e-10 39.1 0.0 0.0015 18.6 0.0 2.3 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|300710838|ref|YP_003736652.1| - 7.1e-10 38.6 0.0 0.00034 19.9 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|300710838|ref|YP_003736652.1| - 1.7e-09 37.9 0.0 0.00068 19.8 0.0 2.9 2 1 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|300710838|ref|YP_003736652.1| - 4.8e-08 32.9 0.0 0.0023 17.7 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|300710838|ref|YP_003736652.1| - 5e-08 33.3 0.0 0.015 15.7 0.0 2.7 2 1 0 2 2 2 2 RNA helicase AAA_25 PF13481.6 gi|300710838|ref|YP_003736652.1| - 2e-07 30.8 0.0 0.68 9.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_7 PF12775.7 gi|300710838|ref|YP_003736652.1| - 2.2e-07 30.6 0.0 0.026 14.1 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_3 PF07726.11 gi|300710838|ref|YP_003736652.1| - 4.3e-07 29.8 0.0 0.013 15.4 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|300710838|ref|YP_003736652.1| - 5.6e-07 30.2 0.0 0.051 14.1 0.0 3.0 2 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|300710838|ref|YP_003736652.1| - 8.5e-07 28.6 0.3 0.034 13.5 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|300710838|ref|YP_003736652.1| - 2.3e-06 28.0 0.1 0.061 13.6 0.0 3.0 3 0 0 3 3 2 2 AAA domain DUF815 PF05673.13 gi|300710838|ref|YP_003736652.1| - 2.4e-06 26.9 0.0 0.0098 15.1 0.0 2.8 2 1 0 2 2 2 2 Protein of unknown function (DUF815) AAA_24 PF13479.6 gi|300710838|ref|YP_003736652.1| - 4.3e-06 26.6 0.0 0.062 13.0 0.1 2.8 2 1 0 2 2 2 2 AAA domain TsaE PF02367.17 gi|300710838|ref|YP_003736652.1| - 4.9e-06 26.6 0.0 0.11 12.5 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|300710838|ref|YP_003736652.1| - 4.9e-06 26.4 0.0 0.22 11.2 0.0 3.4 3 0 0 3 3 3 2 Sigma-54 interaction domain ATPase PF06745.13 gi|300710838|ref|YP_003736652.1| - 1.4e-05 24.6 0.1 0.27 10.6 0.0 3.3 2 1 1 3 3 3 2 KaiC AAA_30 PF13604.6 gi|300710838|ref|YP_003736652.1| - 1.9e-05 24.5 0.3 0.15 11.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain ABC_tran PF00005.27 gi|300710838|ref|YP_003736652.1| - 2.7e-05 24.7 0.0 0.18 12.3 0.0 2.6 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.12 gi|300710838|ref|YP_003736652.1| - 2.8e-05 24.1 0.1 0.7 9.8 0.0 3.6 3 1 1 4 4 3 2 NACHT domain PhoH PF02562.16 gi|300710838|ref|YP_003736652.1| - 4.5e-05 23.0 0.1 0.17 11.3 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_11 PF13086.6 gi|300710838|ref|YP_003736652.1| - 4.5e-05 23.4 0.0 0.14 11.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 gi|300710838|ref|YP_003736652.1| - 0.0001 21.7 0.0 0.27 10.4 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.22 gi|300710838|ref|YP_003736652.1| - 0.00018 20.8 0.0 0.64 9.1 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain Bac_DnaA PF00308.18 gi|300710838|ref|YP_003736652.1| - 0.00023 21.1 0.0 0.2 11.5 0.0 2.6 2 1 0 2 2 2 1 Bacterial dnaA protein Parvo_NS1 PF01057.17 gi|300710838|ref|YP_003736652.1| - 0.00033 19.9 0.0 0.47 9.5 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.12 gi|300710838|ref|YP_003736652.1| - 0.00033 20.0 0.1 0.9 8.8 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_19 PF13245.6 gi|300710838|ref|YP_003736652.1| - 0.00038 20.8 0.3 1.8 8.9 0.0 2.9 2 1 1 3 3 2 2 AAA domain NTPase_1 PF03266.15 gi|300710838|ref|YP_003736652.1| - 0.00038 20.4 0.0 1.3 8.9 0.0 3.4 2 1 0 2 2 2 2 NTPase ATPase_2 PF01637.18 gi|300710838|ref|YP_003736652.1| - 0.00052 20.0 0.0 0.87 9.4 0.0 2.8 2 2 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_17 PF13207.6 gi|300710838|ref|YP_003736652.1| - 0.00072 20.0 0.0 2.8 8.4 0.0 3.0 3 0 0 3 3 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|300710838|ref|YP_003736652.1| - 0.00096 19.3 0.0 3.2 7.8 0.0 3.0 3 0 0 3 3 3 0 Sigma-54 interaction domain ResIII PF04851.15 gi|300710838|ref|YP_003736652.1| - 0.0038 17.2 0.0 1.7 8.6 0.0 2.7 2 2 0 2 2 2 1 Type III restriction enzyme, res subunit HJURP_C PF12347.8 gi|300710838|ref|YP_003736652.1| - 0.0053 16.8 0.1 0.012 15.7 0.1 1.5 1 0 0 1 1 1 1 Holliday junction regulator protein family C-terminal repeat KAP_NTPase PF07693.14 gi|300710838|ref|YP_003736652.1| - 0.009 15.3 0.0 0.68 9.1 0.0 3.0 2 2 2 4 4 4 1 KAP family P-loop domain T2SSE PF00437.20 gi|300710838|ref|YP_003736652.1| - 0.0094 15.0 0.0 3 6.8 0.0 2.9 3 0 0 3 3 3 1 Type II/IV secretion system protein Rad17 PF03215.15 gi|300710838|ref|YP_003736652.1| - 0.013 15.4 0.0 5.1 7.0 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain Vps4_C PF09336.10 gi|300710838|ref|YP_003736652.1| - 0.016 15.2 0.1 0.23 11.5 0.0 2.6 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain Zot PF05707.12 gi|300710838|ref|YP_003736652.1| - 0.03 14.0 0.0 1.7 8.3 0.0 3.1 3 0 0 3 3 3 0 Zonular occludens toxin (Zot) CPT PF07931.12 gi|300710838|ref|YP_003736652.1| - 0.03 14.2 0.0 6.1 6.6 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein Guanylate_kin PF00625.21 gi|300710838|ref|YP_003736652.1| - 0.052 13.2 0.2 34 4.1 0.0 3.5 3 1 1 4 4 3 0 Guanylate kinase AAA_29 PF13555.6 gi|300710838|ref|YP_003736652.1| - 0.057 13.2 0.0 11 5.8 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Cytidylate_kin PF02224.18 gi|300710838|ref|YP_003736652.1| - 0.068 12.9 0.1 11 5.6 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase AFG1_ATPase PF03969.16 gi|300710838|ref|YP_003736652.1| - 0.079 11.8 0.0 4.6 6.0 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase Hydin_ADK PF17213.3 gi|300710838|ref|YP_003736652.1| - 0.11 12.7 0.0 2.8 8.2 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Torsin PF06309.11 gi|300710838|ref|YP_003736652.1| - 0.11 12.6 0.0 5.9 7.0 0.0 2.4 2 0 0 2 2 2 0 Torsin COOH-NH2_lig PF14395.6 gi|300710838|ref|YP_003736652.1| - 0.13 11.5 3.1 5.1 6.2 0.0 3.1 4 0 0 4 4 3 0 Phage phiEco32-like COOH.NH2 ligase-type 2 PIF1 PF05970.14 gi|300710838|ref|YP_003736652.1| - 0.15 11.2 0.0 9 5.4 0.0 2.6 3 0 0 3 3 3 0 PIF1-like helicase Bac_A_amyl_C PF18612.1 gi|300710839|ref|YP_003736653.1| - 0.051 13.3 0.1 0.33 10.7 0.1 2.0 1 1 1 2 2 2 0 Bacterial Alpha amylase C-terminal domain Abhydrolase_6 PF12697.7 gi|300710840|ref|YP_003736654.1| - 2.1e-22 80.8 7.9 2.5e-22 80.6 7.9 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300710840|ref|YP_003736654.1| - 5.4e-17 62.3 0.0 5.2e-08 32.9 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|300710840|ref|YP_003736654.1| - 2.4e-15 56.5 0.4 3.3e-14 52.7 0.4 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 gi|300710840|ref|YP_003736654.1| - 0.0039 16.9 0.0 0.0074 16.0 0.0 1.4 1 0 0 1 1 1 1 Putative esterase Thioesterase PF00975.20 gi|300710840|ref|YP_003736654.1| - 0.0044 17.2 0.0 0.0066 16.6 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 gi|300710840|ref|YP_003736654.1| - 0.006 16.3 0.0 0.07 12.8 0.0 2.4 2 1 0 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 gi|300710840|ref|YP_003736654.1| - 0.0075 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein PGAP1 PF07819.13 gi|300710840|ref|YP_003736654.1| - 0.029 14.1 0.0 5.1 6.7 0.0 2.2 1 1 1 2 2 2 0 PGAP1-like protein Abhydrolase_3 PF07859.13 gi|300710840|ref|YP_003736654.1| - 0.031 14.1 0.1 0.071 13.0 0.1 1.6 1 1 0 1 1 1 0 alpha/beta hydrolase fold Pantoate_transf PF02548.15 gi|300710841|ref|YP_003736655.1| - 1.1e-100 336.3 0.3 1.3e-100 336.1 0.3 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|300710841|ref|YP_003736655.1| - 4.9e-06 26.2 2.0 6.1e-05 22.6 1.9 2.4 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase HAD_2 PF13419.6 gi|300710843|ref|YP_003736657.1| - 1.4e-15 57.8 0.0 6.9e-13 49.1 0.0 2.1 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300710843|ref|YP_003736657.1| - 1.2e-07 31.7 0.0 2.4e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|300710843|ref|YP_003736657.1| - 4.4e-07 30.4 3.9 2.1e-05 24.9 0.1 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300710843|ref|YP_003736657.1| - 0.00035 21.0 2.3 0.002 18.6 2.3 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 gi|300710843|ref|YP_003736657.1| - 0.16 11.8 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Acid Phosphatase TIM PF00121.18 gi|300710844|ref|YP_003736658.1| - 9.6e-08 31.7 0.0 1.3e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|300710844|ref|YP_003736658.1| - 6.8e-05 22.3 1.8 6.8e-05 22.3 1.8 2.2 2 1 0 3 3 3 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|300710844|ref|YP_003736658.1| - 0.0022 17.1 2.4 0.0052 15.9 2.4 1.6 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|300710844|ref|YP_003736658.1| - 0.0057 16.1 6.2 0.0057 16.1 6.2 1.4 2 0 0 2 2 2 1 Nitronate monooxygenase IGPS PF00218.21 gi|300710844|ref|YP_003736658.1| - 0.015 14.4 0.0 0.049 12.8 0.0 1.8 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase ADH_zinc_N PF00107.26 gi|300710844|ref|YP_003736658.1| - 0.035 14.1 5.1 0.19 11.7 0.3 3.2 3 1 1 4 4 4 0 Zinc-binding dehydrogenase Hydrolase_like PF13242.6 gi|300710844|ref|YP_003736658.1| - 0.62 10.2 7.7 0.42 10.7 0.2 2.9 3 1 0 3 3 3 0 HAD-hyrolase-like HTH_3 PF01381.22 gi|300710845|ref|YP_003736659.1| - 1.3e-10 41.1 1.5 1.7e-10 40.8 1.5 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|300710845|ref|YP_003736659.1| - 1.3e-09 37.9 0.8 2.2e-09 37.2 0.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|300710845|ref|YP_003736659.1| - 4.5e-09 36.5 0.6 6.6e-09 36.0 0.6 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|300710845|ref|YP_003736659.1| - 4.7e-06 26.4 0.9 6.6e-06 25.9 0.9 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|300710845|ref|YP_003736659.1| - 0.029 14.3 0.1 0.062 13.3 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain Adeno_terminal PF02459.15 gi|300710846|ref|YP_003736660.1| - 0.81 8.0 4.7 0.82 8.0 4.7 1.0 1 0 0 1 1 1 0 Adenoviral DNA terminal protein CDP-OH_P_transf PF01066.21 gi|300710847|ref|YP_003736661.1| - 6.8e-10 39.6 2.1 6.8e-10 39.6 2.1 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF4051 PF13260.6 gi|300710847|ref|YP_003736661.1| - 0.077 12.7 1.3 0.21 11.3 1.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF4381 PF14316.6 gi|300710847|ref|YP_003736661.1| - 8.8 6.6 8.0 18 5.6 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) AAA_18 PF13238.6 gi|300710848|ref|YP_003736662.1| - 1.8e-21 77.1 0.8 3.1e-21 76.3 0.8 1.3 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|300710848|ref|YP_003736662.1| - 0.00049 20.4 2.2 0.0033 17.7 0.3 2.2 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|300710848|ref|YP_003736662.1| - 0.003 17.7 0.9 1 9.5 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|300710848|ref|YP_003736662.1| - 0.015 15.7 1.6 0.06 13.7 1.6 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_17 PF13207.6 gi|300710848|ref|YP_003736662.1| - 0.027 14.9 1.3 11 6.5 0.2 2.7 1 1 2 3 3 3 0 AAA domain AAA_22 PF13401.6 gi|300710848|ref|YP_003736662.1| - 0.032 14.5 0.1 0.054 13.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain dNK PF01712.19 gi|300710848|ref|YP_003736662.1| - 0.036 13.9 0.0 2 8.2 0.0 2.1 2 0 0 2 2 2 0 Deoxynucleoside kinase RNA_helicase PF00910.22 gi|300710848|ref|YP_003736662.1| - 0.043 14.2 0.0 0.075 13.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase CPT PF07931.12 gi|300710848|ref|YP_003736662.1| - 0.051 13.4 0.6 0.12 12.2 0.4 1.8 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_19 PF13245.6 gi|300710848|ref|YP_003736662.1| - 0.099 13.0 0.0 0.41 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|300710848|ref|YP_003736662.1| - 0.13 12.0 0.0 0.19 11.4 0.0 1.5 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 gi|300710848|ref|YP_003736662.1| - 0.17 11.6 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_2 PF03668.15 gi|300710848|ref|YP_003736662.1| - 0.17 11.2 0.5 0.36 10.1 0.5 1.5 1 1 0 1 1 1 0 P-loop ATPase protein family AAA PF00004.29 gi|300710848|ref|YP_003736662.1| - 0.23 11.9 0.6 0.34 11.3 0.6 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Aminotran_1_2 PF00155.21 gi|300710849|ref|YP_003736663.1| - 1.8e-64 218.2 0.0 2.1e-64 218.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 gi|300710849|ref|YP_003736663.1| - 0.00089 18.2 0.0 0.0016 17.4 0.0 1.4 2 0 0 2 2 2 1 Allinase Nup54_57_C PF18570.1 gi|300710849|ref|YP_003736663.1| - 0.011 15.3 0.1 0.02 14.5 0.1 1.4 1 0 0 1 1 1 0 NUP57/Nup54 C-terminal domain HTH_Tnp_1 PF01527.20 gi|300710849|ref|YP_003736663.1| - 0.027 14.8 0.0 0.082 13.2 0.0 1.8 1 0 0 1 1 1 0 Transposase FTR PF01913.18 gi|300710849|ref|YP_003736663.1| - 0.079 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase FAA_hydrolase PF01557.18 gi|300710850|ref|YP_003736664.1| - 1.8e-63 214.2 0.0 2.1e-63 213.9 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Lactamase_B_3 PF13483.6 gi|300710851|ref|YP_003736665.1| - 4.3e-20 72.2 0.1 6.4e-20 71.7 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|300710851|ref|YP_003736665.1| - 2.3e-15 56.6 0.4 3.8e-15 55.9 0.4 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300710851|ref|YP_003736665.1| - 5.5e-10 39.6 5.1 1.4e-09 38.2 5.1 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily OsmC PF02566.19 gi|300710853|ref|YP_003736667.1| - 3.2e-11 43.6 0.0 4.3e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein OsmC PF02566.19 gi|300710854|ref|YP_003736668.1| - 1.1e-10 41.8 0.0 1.7e-10 41.2 0.0 1.3 1 1 0 1 1 1 1 OsmC-like protein SnoaL PF07366.12 gi|300710855|ref|YP_003736669.1| - 2.2e-37 127.6 0.2 2.5e-37 127.5 0.2 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 gi|300710855|ref|YP_003736669.1| - 3.1e-21 75.9 2.8 3.7e-21 75.7 2.8 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|300710855|ref|YP_003736669.1| - 0.0071 16.7 0.4 0.011 16.1 0.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 gi|300710855|ref|YP_003736669.1| - 0.025 14.8 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain VAPB_antitox PF02697.14 gi|300710857|ref|YP_003736671.1| - 0.00036 21.2 0.2 0.00037 21.2 0.2 1.1 1 0 0 1 1 1 1 Putative antitoxin RHH_1 PF01402.21 gi|300710857|ref|YP_003736671.1| - 0.043 13.8 3.0 0.24 11.4 1.5 2.1 1 1 1 2 2 2 0 Ribbon-helix-helix protein, copG family DUF4806 PF16064.5 gi|300710857|ref|YP_003736671.1| - 0.058 13.7 0.2 0.062 13.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) DUF294_C PF10335.9 gi|300710857|ref|YP_003736671.1| - 0.1 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain Xan_ur_permease PF00860.20 gi|300710858|ref|YP_003736672.1| - 2.5e-80 270.1 38.4 4.3e-80 269.3 38.4 1.4 1 1 0 1 1 1 1 Permease family Bap31 PF05529.12 gi|300710858|ref|YP_003736672.1| - 0.014 15.2 0.0 0.034 14.0 0.0 1.6 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region Polyketide_cyc2 PF10604.9 gi|300710859|ref|YP_003736673.1| - 1e-13 51.8 0.0 1.1e-13 51.6 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|300710859|ref|YP_003736673.1| - 0.0002 21.6 0.0 0.00027 21.2 0.0 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc PF03364.20 gi|300710859|ref|YP_003736673.1| - 0.035 14.3 0.0 0.071 13.3 0.0 1.6 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport AhpC-TSA PF00578.21 gi|300710860|ref|YP_003736674.1| - 3.4e-15 56.1 0.0 4.5e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|300710860|ref|YP_003736674.1| - 7.9e-13 48.4 0.0 9.6e-13 48.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 gi|300710860|ref|YP_003736674.1| - 0.0045 17.4 0.0 0.0069 16.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|300710860|ref|YP_003736674.1| - 0.12 12.6 0.1 0.3 11.4 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin EamA PF00892.20 gi|300710861|ref|YP_003736675.1| - 2.7e-08 34.1 20.1 2e-06 28.0 7.1 1.9 1 1 1 2 2 2 2 EamA-like transporter family ABC_trans_CmpB PF06541.11 gi|300710861|ref|YP_003736675.1| - 10 6.4 12.8 0.52 10.5 3.8 2.2 2 0 0 2 2 2 0 Putative ABC-transporter type IV AsnC_trans_reg PF01037.21 gi|300710862|ref|YP_003736676.1| - 2.5e-17 62.6 0.4 4.5e-17 61.8 0.2 1.5 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|300710862|ref|YP_003736676.1| - 1.5e-06 28.0 0.6 3.5e-06 26.7 0.2 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|300710862|ref|YP_003736676.1| - 0.00013 21.5 0.1 0.00026 20.5 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GYD PF08734.11 gi|300710862|ref|YP_003736676.1| - 0.014 15.4 0.2 0.047 13.7 0.0 1.9 1 1 1 2 2 2 0 GYD domain HTH_36 PF13730.6 gi|300710862|ref|YP_003736676.1| - 0.042 13.8 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Mga PF08280.11 gi|300710862|ref|YP_003736676.1| - 0.05 13.6 0.1 0.42 10.7 0.0 2.1 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain DprA_WH PF17782.1 gi|300710862|ref|YP_003736676.1| - 0.085 13.0 0.2 0.16 12.1 0.2 1.4 1 0 0 1 1 1 0 DprA winged helix domain RPA_C PF08784.11 gi|300710862|ref|YP_003736676.1| - 0.11 13.1 0.0 0.25 12.0 0.0 1.6 2 0 0 2 2 2 0 Replication protein A C terminal TFIIE_alpha PF02002.17 gi|300710862|ref|YP_003736676.1| - 0.12 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_Crp_2 PF13545.6 gi|300710862|ref|YP_003736676.1| - 0.14 12.1 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PCI PF01399.27 gi|300710862|ref|YP_003736676.1| - 0.19 12.2 0.0 0.58 10.7 0.0 1.7 2 1 0 2 2 2 0 PCI domain Aminotran_1_2 PF00155.21 gi|300710863|ref|YP_003736677.1| - 6.5e-68 229.5 0.0 7.3e-68 229.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|300710863|ref|YP_003736677.1| - 1.9e-05 24.1 0.0 3.7e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase OCD_Mu_crystall PF02423.15 gi|300710865|ref|YP_003736679.1| - 5.5e-50 170.1 0.0 7e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family F420_oxidored PF03807.17 gi|300710865|ref|YP_003736679.1| - 0.0043 17.6 0.1 0.012 16.2 0.0 1.8 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|300710865|ref|YP_003736679.1| - 0.0044 17.1 0.0 0.009 16.1 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase DUF2892 PF11127.8 gi|300710866|ref|YP_003736680.1| - 9.9e-10 38.3 4.4 1.2e-09 38.1 4.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Dak1 PF02733.17 gi|300710867|ref|YP_003736681.1| - 6.1e-125 416.2 4.1 6.9e-125 416.1 4.1 1.0 1 0 0 1 1 1 1 Dak1 domain Dak2 PF02734.17 gi|300710868|ref|YP_003736682.1| - 1.4e-44 152.1 1.0 1.4e-44 152.1 1.0 1.5 2 0 0 2 2 2 1 DAK2 domain DUF4754 PF15946.5 gi|300710868|ref|YP_003736682.1| - 0.043 14.1 0.2 0.12 12.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4754) DBC1 PF14443.6 gi|300710868|ref|YP_003736682.1| - 0.22 11.5 0.0 0.4 10.7 0.0 1.4 1 0 0 1 1 1 0 DBC1 EIIA-man PF03610.16 gi|300710869|ref|YP_003736683.1| - 1.3e-23 83.5 4.9 1.5e-23 83.2 4.9 1.1 1 0 0 1 1 1 1 PTS system fructose IIA component AIRS PF00586.24 gi|300710870|ref|YP_003736684.1| - 7.6e-43 145.1 5.1 4.7e-24 84.9 0.1 3.0 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|300710870|ref|YP_003736684.1| - 7.6e-36 123.6 10.3 4e-30 105.0 1.4 2.9 3 0 0 3 3 3 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 gi|300710870|ref|YP_003736684.1| - 1.1e-06 29.0 0.1 2.7e-06 27.8 0.1 1.7 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain ABC_tran PF00005.27 gi|300710871|ref|YP_003736685.1| - 4e-32 111.6 0.0 6.3e-32 111.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|300710871|ref|YP_003736685.1| - 7.4e-09 36.3 0.0 9.9e-08 32.7 0.0 2.8 3 0 0 3 3 2 1 MalK OB fold domain TOBE_2 PF08402.10 gi|300710871|ref|YP_003736685.1| - 9.6e-09 35.3 0.1 3.7e-08 33.4 0.1 2.1 2 0 0 2 2 1 1 TOBE domain AAA_21 PF13304.6 gi|300710871|ref|YP_003736685.1| - 6e-08 32.8 0.0 0.0018 18.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 gi|300710871|ref|YP_003736685.1| - 8.3e-06 26.0 0.2 2.4e-05 24.5 0.0 1.9 2 0 0 2 2 1 1 TOBE domain SMC_N PF02463.19 gi|300710871|ref|YP_003736685.1| - 0.00021 20.8 0.1 0.026 14.0 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|300710871|ref|YP_003736685.1| - 0.00063 20.0 0.0 0.0024 18.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain CysA_C_terminal PF17850.1 gi|300710871|ref|YP_003736685.1| - 0.0012 19.4 0.2 0.0041 17.7 0.2 2.0 1 0 0 1 1 1 1 CysA C-terminal regulatory domain Rad17 PF03215.15 gi|300710871|ref|YP_003736685.1| - 0.0014 18.6 0.0 0.0022 17.9 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|300710871|ref|YP_003736685.1| - 0.0025 17.7 0.0 0.0054 16.7 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|300710871|ref|YP_003736685.1| - 0.0037 17.7 0.2 0.0071 16.8 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|300710871|ref|YP_003736685.1| - 0.005 17.3 0.0 0.026 15.0 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|300710871|ref|YP_003736685.1| - 0.0052 16.5 0.0 0.018 14.7 0.0 1.7 1 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|300710871|ref|YP_003736685.1| - 0.0088 15.8 0.0 0.022 14.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain PRC PF05239.16 gi|300710871|ref|YP_003736685.1| - 0.035 14.2 3.6 0.88 9.7 0.6 2.6 2 1 0 2 2 2 0 PRC-barrel domain AAA_30 PF13604.6 gi|300710871|ref|YP_003736685.1| - 0.051 13.3 0.2 0.43 10.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain MIT_C PF16565.5 gi|300710871|ref|YP_003736685.1| - 0.059 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT AAA_33 PF13671.6 gi|300710871|ref|YP_003736685.1| - 0.061 13.5 0.2 0.12 12.5 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|300710871|ref|YP_003736685.1| - 0.086 12.4 0.0 0.59 9.7 0.0 2.2 2 1 0 2 2 2 0 AAA domain Pyr_redox PF00070.27 gi|300710871|ref|YP_003736685.1| - 0.095 13.3 0.3 12 6.6 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase AAA_23 PF13476.6 gi|300710871|ref|YP_003736685.1| - 0.14 12.7 0.0 0.29 11.6 0.0 1.5 2 0 0 2 2 1 0 AAA domain BPD_transp_1 PF00528.22 gi|300710872|ref|YP_003736686.1| - 8.6e-15 55.0 16.7 8.6e-15 55.0 16.7 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|300710873|ref|YP_003736687.1| - 4.2e-19 69.0 14.6 4.2e-19 69.0 14.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 gi|300710874|ref|YP_003736688.1| - 2.2e-20 73.6 1.8 3e-20 73.2 1.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|300710874|ref|YP_003736688.1| - 9e-12 45.6 3.2 1.2e-11 45.1 3.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Lyase_1 PF00206.20 gi|300710875|ref|YP_003736689.1| - 4.7e-104 348.1 0.1 4.7e-104 348.1 0.1 1.4 2 0 0 2 2 2 1 Lyase FumaraseC_C PF10415.9 gi|300710875|ref|YP_003736689.1| - 2.7e-24 85.3 1.0 5.5e-24 84.3 0.1 2.1 2 0 0 2 2 2 1 Fumarase C C-terminus DUF5387 PF17361.2 gi|300710875|ref|YP_003736689.1| - 0.41 10.3 4.4 0.1 12.2 0.8 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5387) zf-C2HC_2 PF13913.6 gi|300710876|ref|YP_003736690.1| - 0.012 15.5 3.9 0.023 14.6 0.3 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Zn_ribbon_recom PF13408.6 gi|300710876|ref|YP_003736690.1| - 0.024 15.2 1.0 0.11 13.0 0.1 2.0 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2 PF00096.26 gi|300710876|ref|YP_003736690.1| - 0.039 14.4 0.5 0.039 14.4 0.5 3.0 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|300710876|ref|YP_003736690.1| - 0.042 14.7 7.8 0.3 12.0 1.0 2.8 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_11 PF16622.5 gi|300710876|ref|YP_003736690.1| - 0.058 13.2 3.4 0.2 11.5 0.4 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type Zn-ribbon_8 PF09723.10 gi|300710876|ref|YP_003736690.1| - 0.061 13.5 6.3 3.4 7.8 0.7 2.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2H2_jaz PF12171.8 gi|300710876|ref|YP_003736690.1| - 0.089 13.1 0.9 0.29 11.5 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-H2C2_2 PF13465.6 gi|300710876|ref|YP_003736690.1| - 0.2 12.1 5.4 9 6.9 0.4 3.2 3 0 0 3 3 3 0 Zinc-finger double domain DZR PF12773.7 gi|300710876|ref|YP_003736690.1| - 0.3 11.1 6.2 3.4 7.8 6.3 2.1 1 1 0 1 1 1 0 Double zinc ribbon zf-C2H2_6 PF13912.6 gi|300710876|ref|YP_003736690.1| - 0.3 11.1 3.2 0.81 9.8 0.4 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-HIT PF04438.16 gi|300710876|ref|YP_003736690.1| - 0.31 10.9 6.9 13 5.7 1.2 3.2 3 0 0 3 3 3 0 HIT zinc finger HypA PF01155.19 gi|300710876|ref|YP_003736690.1| - 0.33 11.0 5.5 0.69 9.9 1.3 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYVE PF01363.21 gi|300710876|ref|YP_003736690.1| - 0.5 10.6 7.1 0.66 10.2 7.1 1.4 1 1 0 1 1 1 0 FYVE zinc finger C1_2 PF03107.16 gi|300710876|ref|YP_003736690.1| - 1 9.7 8.6 0.22 11.9 1.7 2.2 1 1 1 2 2 2 0 C1 domain Zn_ribbon_SprT PF17283.2 gi|300710876|ref|YP_003736690.1| - 1.9 8.4 9.3 3.8 7.5 5.5 2.5 2 1 0 2 2 2 0 SprT-like zinc ribbon domain DUF2256 PF10013.9 gi|300710876|ref|YP_003736690.1| - 2.5 8.3 7.4 3.7 7.7 1.3 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF1360 PF07098.11 gi|300710877|ref|YP_003736691.1| - 1.1 9.2 5.8 1.4 8.9 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Phage_holin_3_6 PF07332.11 gi|300710877|ref|YP_003736691.1| - 4.1 7.5 13.0 4.5 7.3 13.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III SelP_N PF04592.14 gi|300710878|ref|YP_003736692.1| - 1.2 8.5 10.8 1.3 8.4 10.8 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region GatB_N PF02934.15 gi|300710879|ref|YP_003736693.1| - 1e-62 212.0 0.0 1.4e-62 211.6 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|300710879|ref|YP_003736693.1| - 1.6e-18 67.0 0.0 2.7e-18 66.3 0.0 1.3 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|300710879|ref|YP_003736693.1| - 1.6e-13 50.7 0.0 2.9e-13 49.9 0.0 1.4 1 0 0 1 1 1 1 GAD domain YqeY PF09424.10 gi|300710879|ref|YP_003736693.1| - 0.00083 19.5 0.5 0.0015 18.7 0.5 1.4 1 0 0 1 1 1 1 Yqey-like protein LysE PF01810.18 gi|300710880|ref|YP_003736694.1| - 3.5e-29 101.7 5.1 3.8e-29 101.5 5.1 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|300710880|ref|YP_003736694.1| - 0.0077 15.9 1.1 0.015 15.0 1.1 1.7 1 1 0 1 1 1 1 Integral membrane protein TerC family PTR2 PF00854.21 gi|300710880|ref|YP_003736694.1| - 0.042 12.7 2.3 0.044 12.6 2.1 1.3 1 1 0 1 1 1 0 POT family Phage_holin_3_6 PF07332.11 gi|300710880|ref|YP_003736694.1| - 0.14 12.2 0.2 0.14 12.2 0.2 2.7 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III SpoU_methylase PF00588.19 gi|300710881|ref|YP_003736695.1| - 4.1e-29 101.6 0.0 5.3e-29 101.2 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Lactamase_B_6 PF16661.5 gi|300710881|ref|YP_003736695.1| - 0.058 12.8 0.0 0.089 12.2 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Pterin_bind PF00809.22 gi|300710883|ref|YP_003736697.1| - 1.1e-37 130.0 0.0 2e-37 129.2 0.0 1.4 1 1 0 1 1 1 1 Pterin binding enzyme MAF_flag10 PF01973.18 gi|300710884|ref|YP_003736698.1| - 1.7e-18 66.9 0.0 2.3e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 ADH_zinc_N PF00107.26 gi|300710885|ref|YP_003736699.1| - 5.5e-27 94.3 0.0 8.4e-27 93.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|300710885|ref|YP_003736699.1| - 2.1e-20 74.1 0.0 3.4e-20 73.4 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|300710885|ref|YP_003736699.1| - 5.3e-08 32.7 0.1 6.9e-07 29.1 0.0 2.5 2 1 1 3 3 3 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 gi|300710885|ref|YP_003736699.1| - 0.063 12.7 0.1 0.099 12.1 0.1 1.3 1 0 0 1 1 1 0 short chain dehydrogenase RPE65 PF03055.15 gi|300710886|ref|YP_003736700.1| - 2.7e-110 369.7 0.0 3.5e-110 369.4 0.0 1.0 1 0 0 1 1 1 1 Retinal pigment epithelial membrane protein Bac_luciferase PF00296.20 gi|300710887|ref|YP_003736701.1| - 1.4e-80 271.0 8.8 1.9e-80 270.6 8.8 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Ribonuc_red_sm PF00268.21 gi|300710888|ref|YP_003736702.1| - 5.1e-13 49.1 0.0 6.8e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain GST_N_3 PF13417.6 gi|300710889|ref|YP_003736703.1| - 7.5e-13 48.7 0.0 8.2e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 gi|300710889|ref|YP_003736703.1| - 1.1e-12 48.0 0.0 1.4e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 gi|300710889|ref|YP_003736703.1| - 1.3e-09 38.3 0.0 1.4e-09 38.1 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 gi|300710889|ref|YP_003736703.1| - 0.00027 21.2 0.0 0.00033 20.9 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 gi|300710889|ref|YP_003736703.1| - 0.0059 17.0 0.1 0.0074 16.7 0.1 1.4 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) PhoU PF01895.19 gi|300710890|ref|YP_003736704.1| - 1.3e-21 76.8 2.2 7.5e-13 48.8 0.0 2.3 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|300710890|ref|YP_003736704.1| - 1.9e-09 37.3 0.0 9e-09 35.1 0.0 2.1 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin ABC_tran PF00005.27 gi|300710891|ref|YP_003736705.1| - 4.1e-30 105.1 0.0 7.8e-30 104.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710891|ref|YP_003736705.1| - 2.6e-11 43.9 0.2 4.4e-05 23.4 0.0 2.4 2 1 1 3 3 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300710891|ref|YP_003736705.1| - 9.5e-10 38.3 0.1 8.6e-09 35.1 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|300710891|ref|YP_003736705.1| - 0.00012 21.9 0.0 0.0077 16.0 0.0 2.2 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|300710891|ref|YP_003736705.1| - 0.00018 21.8 0.0 0.00052 20.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|300710891|ref|YP_003736705.1| - 0.00054 20.5 0.2 0.0022 18.5 0.0 2.1 2 1 1 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|300710891|ref|YP_003736705.1| - 0.00068 20.1 0.1 0.0022 18.4 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|300710891|ref|YP_003736705.1| - 0.0011 18.9 0.0 0.0022 17.9 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|300710891|ref|YP_003736705.1| - 0.0018 18.0 0.0 0.0039 16.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|300710891|ref|YP_003736705.1| - 0.0033 17.2 0.2 0.037 13.7 0.2 2.1 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|300710891|ref|YP_003736705.1| - 0.0042 17.0 0.0 0.0073 16.2 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain ABC_ATPase PF09818.9 gi|300710891|ref|YP_003736705.1| - 0.0067 15.3 0.0 0.091 11.5 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_25 PF13481.6 gi|300710891|ref|YP_003736705.1| - 0.0097 15.5 0.0 0.062 12.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 gi|300710891|ref|YP_003736705.1| - 0.018 14.4 0.0 0.037 13.4 0.0 1.5 1 0 0 1 1 1 0 KaiC AAA_18 PF13238.6 gi|300710891|ref|YP_003736705.1| - 0.031 14.8 0.0 0.076 13.6 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_33 PF13671.6 gi|300710891|ref|YP_003736705.1| - 0.032 14.4 0.0 0.06 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain DeoRC PF00455.22 gi|300710891|ref|YP_003736705.1| - 0.034 14.1 0.0 0.055 13.4 0.0 1.3 1 0 0 1 1 1 0 DeoR C terminal sensor domain PRK PF00485.18 gi|300710891|ref|YP_003736705.1| - 0.043 13.6 0.0 0.074 12.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 gi|300710891|ref|YP_003736705.1| - 0.057 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 gi|300710891|ref|YP_003736705.1| - 0.06 12.5 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 gi|300710891|ref|YP_003736705.1| - 0.076 12.7 0.0 0.21 11.3 0.0 1.7 2 1 0 2 2 1 0 AAA domain ATPase_2 PF01637.18 gi|300710891|ref|YP_003736705.1| - 0.082 12.8 0.0 0.6 10.0 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Relaxase PF03432.14 gi|300710891|ref|YP_003736705.1| - 0.13 11.8 0.0 0.3 10.6 0.0 1.6 2 0 0 2 2 2 0 Relaxase/Mobilisation nuclease domain AAA_28 PF13521.6 gi|300710891|ref|YP_003736705.1| - 0.14 12.4 0.0 0.34 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|300710891|ref|YP_003736705.1| - 0.16 10.7 0.0 1.3 7.7 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein RNA_helicase PF00910.22 gi|300710891|ref|YP_003736705.1| - 0.19 12.2 0.0 0.42 11.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Viral_helicase1 PF01443.18 gi|300710891|ref|YP_003736705.1| - 0.19 11.4 0.0 0.36 10.5 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase PhoU PF01895.19 gi|300710892|ref|YP_003736706.1| - 3.6e-35 120.3 12.7 3.9e-20 72.1 1.4 2.2 2 0 0 2 2 2 2 PhoU domain RmlD_sub_bind PF04321.17 gi|300710893|ref|YP_003736707.1| - 7.5e-55 186.0 0.0 8.2e-55 185.9 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|300710893|ref|YP_003736707.1| - 1.7e-24 86.6 0.0 1.9e-24 86.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|300710893|ref|YP_003736707.1| - 1.2e-14 54.4 0.0 1.9e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|300710893|ref|YP_003736707.1| - 8.4e-12 44.8 0.4 1.1e-10 41.2 0.2 2.5 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|300710893|ref|YP_003736707.1| - 6.1e-11 42.0 0.1 1.3e-08 34.4 0.0 2.4 2 1 0 2 2 2 2 Male sterility protein 3Beta_HSD PF01073.19 gi|300710893|ref|YP_003736707.1| - 1.2e-09 37.7 0.1 3.9e-09 35.9 0.1 1.7 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|300710893|ref|YP_003736707.1| - 2e-07 31.1 0.0 2.9e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DUF3005 PF11448.8 gi|300710893|ref|YP_003736707.1| - 0.083 12.9 0.3 0.13 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3005) GDP_Man_Dehyd PF16363.5 gi|300710894|ref|YP_003736708.1| - 1.1e-139 465.5 0.1 1.2e-139 465.3 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|300710894|ref|YP_003736708.1| - 1.6e-67 227.5 0.1 2e-67 227.2 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|300710894|ref|YP_003736708.1| - 6.9e-12 45.1 0.1 1.1e-11 44.3 0.1 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|300710894|ref|YP_003736708.1| - 1.8e-07 30.4 0.0 2.5e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|300710894|ref|YP_003736708.1| - 8.2e-07 28.4 0.0 1.5e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|300710894|ref|YP_003736708.1| - 6.8e-05 22.2 0.0 0.0001 21.6 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|300710894|ref|YP_003736708.1| - 0.00037 20.5 0.0 0.0026 17.7 0.0 2.0 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|300710894|ref|YP_003736708.1| - 0.0097 15.5 0.0 0.017 14.7 0.0 1.5 1 1 0 1 1 1 1 NmrA-like family KR PF08659.10 gi|300710894|ref|YP_003736708.1| - 0.015 15.2 0.0 0.059 13.3 0.0 1.9 1 1 0 1 1 1 0 KR domain Gln-synt_C-ter PF18318.1 gi|300710894|ref|YP_003736708.1| - 0.085 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Glutamine synthetase C-terminal domain ApbA PF02558.16 gi|300710894|ref|YP_003736708.1| - 0.17 11.5 0.1 0.55 9.9 0.0 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA FAD_binding_7 PF03441.14 gi|300710895|ref|YP_003736709.1| - 1e-78 263.5 2.3 1.4e-78 263.1 2.3 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 gi|300710895|ref|YP_003736709.1| - 1.4e-41 142.3 0.0 3.7e-41 140.9 0.0 1.7 2 0 0 2 2 2 1 DNA photolyase UbiA PF01040.18 gi|300710896|ref|YP_003736710.1| - 1.1e-19 70.7 21.5 1.6e-19 70.3 20.7 1.5 1 1 0 1 1 1 1 UbiA prenyltransferase family HisKA_7TM PF16927.5 gi|300710897|ref|YP_003736711.1| - 5.3e-53 180.3 21.1 6.9e-53 179.9 21.1 1.1 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|300710897|ref|YP_003736711.1| - 3.9e-14 53.1 0.0 8.3e-14 52.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.10 gi|300710897|ref|YP_003736711.1| - 8e-09 35.7 2.4 1e-06 29.0 1.6 3.0 2 1 0 2 2 2 1 PAS fold PAS PF00989.25 gi|300710897|ref|YP_003736711.1| - 1.8e-08 34.3 0.0 2.1e-07 30.9 0.0 2.5 1 1 1 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|300710897|ref|YP_003736711.1| - 9.4e-08 32.3 0.0 2.8e-06 27.5 0.0 2.9 2 1 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|300710897|ref|YP_003736711.1| - 1.9e-07 31.1 0.9 7.7e-07 29.1 0.1 2.1 1 1 1 2 2 2 1 Histidine kinase-like ATPase domain PAS_8 PF13188.7 gi|300710897|ref|YP_003736711.1| - 2.7e-06 27.3 0.1 0.00012 22.0 0.0 2.6 1 1 1 2 2 2 1 PAS domain HisKA_4TM PF16926.5 gi|300710897|ref|YP_003736711.1| - 0.0043 16.6 0.3 0.015 14.9 0.3 1.9 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HisKA PF00512.25 gi|300710897|ref|YP_003736711.1| - 0.04 14.0 0.6 0.074 13.1 0.6 1.5 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|300710897|ref|YP_003736711.1| - 0.043 13.7 0.0 0.074 12.9 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|300710897|ref|YP_003736711.1| - 0.062 13.2 0.0 0.23 11.4 0.0 1.8 2 0 0 2 2 2 0 GHKL domain Sod_Fe_N PF00081.22 gi|300710898|ref|YP_003736712.1| - 1.1e-29 102.7 0.5 2.2e-29 101.7 0.5 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Sod_Fe_C PF02777.18 gi|300710898|ref|YP_003736712.1| - 1.4e-28 99.0 0.0 2.1e-28 98.5 0.0 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain HisKA PF00512.25 gi|300710900|ref|YP_003736714.1| - 6.1e-10 39.0 0.8 1.5e-09 37.7 0.8 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 gi|300710900|ref|YP_003736714.1| - 8.8e-10 39.1 0.0 1.6e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.6 gi|300710900|ref|YP_003736714.1| - 7e-09 36.1 1.2 7e-09 36.1 1.2 2.7 3 0 0 3 3 3 1 GAF domain PAS_4 PF08448.10 gi|300710900|ref|YP_003736714.1| - 4.3e-08 33.4 0.4 2.2e-07 31.1 0.4 2.3 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.6 gi|300710900|ref|YP_003736714.1| - 1.3e-07 32.1 0.2 3.1e-07 30.8 0.1 1.7 2 0 0 2 2 2 1 GAF domain PAS_9 PF13426.7 gi|300710900|ref|YP_003736714.1| - 7.3e-07 29.4 0.0 1.6e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 gi|300710900|ref|YP_003736714.1| - 7.5e-05 22.7 0.0 0.0002 21.4 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|300710900|ref|YP_003736714.1| - 0.00057 19.8 0.8 0.022 14.8 0.1 2.9 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 gi|300710900|ref|YP_003736714.1| - 0.0025 18.1 0.0 0.0056 16.9 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.6 gi|300710900|ref|YP_003736714.1| - 0.0074 16.1 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thy1 PF02511.15 gi|300710901|ref|YP_003736715.1| - 1.3e-56 191.4 0.0 1.4e-56 191.3 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase complementing protein CoA_transf_3 PF02515.17 gi|300710902|ref|YP_003736716.1| - 1.1e-133 445.9 0.0 1.3e-133 445.7 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III Beta_helix PF13229.6 gi|300710903|ref|YP_003736717.1| - 9.3e-10 38.6 18.1 1.8e-05 24.7 0.6 2.8 1 1 2 3 3 3 3 Right handed beta helix region NosD PF05048.13 gi|300710903|ref|YP_003736717.1| - 5.5e-07 29.1 1.5 0.022 14.0 0.8 2.2 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) adh_short PF00106.25 gi|300710904|ref|YP_003736718.1| - 2.6e-49 167.4 0.0 3.5e-49 166.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300710904|ref|YP_003736718.1| - 6.1e-40 137.2 0.1 7.3e-40 137.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|300710904|ref|YP_003736718.1| - 2e-11 44.1 0.0 2.8e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 gi|300710904|ref|YP_003736718.1| - 0.0057 15.8 0.0 0.0072 15.5 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 gi|300710904|ref|YP_003736718.1| - 0.0069 15.9 0.2 0.02 14.4 0.1 2.0 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.8 gi|300710904|ref|YP_003736718.1| - 0.048 13.4 0.2 0.12 12.1 0.2 1.6 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HTH_IclR PF09339.10 gi|300710905|ref|YP_003736719.1| - 5.3e-05 22.9 0.1 9e-05 22.2 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|300710905|ref|YP_003736719.1| - 0.00053 19.5 0.2 0.00086 18.8 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300710905|ref|YP_003736719.1| - 0.0039 17.0 0.0 0.0061 16.4 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300710905|ref|YP_003736719.1| - 0.0094 15.8 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB NAD_binding_2 PF03446.15 gi|300710906|ref|YP_003736720.1| - 5.9e-42 143.5 1.4 9.9e-42 142.8 0.2 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|300710906|ref|YP_003736720.1| - 4.9e-39 133.3 1.3 7e-39 132.8 1.3 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 gi|300710906|ref|YP_003736720.1| - 0.0024 18.4 0.0 0.0095 16.5 0.0 2.1 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|300710906|ref|YP_003736720.1| - 0.028 13.8 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PDH PF02153.17 gi|300710906|ref|YP_003736720.1| - 0.094 11.7 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase HR_lesion PF05514.11 gi|300710909|ref|YP_003736723.1| - 5.9e-07 29.7 0.1 0.00027 21.1 0.0 2.1 1 1 1 2 2 2 2 HR-like lesion-inducing DoxX PF07681.12 gi|300710909|ref|YP_003736723.1| - 2.9e-06 27.8 1.9 2.9e-06 27.8 1.9 1.4 2 0 0 2 2 2 1 DoxX DUF4203 PF13886.6 gi|300710909|ref|YP_003736723.1| - 0.014 15.1 2.7 0.025 14.2 2.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4203) DUF2157 PF09925.9 gi|300710909|ref|YP_003736723.1| - 0.45 10.3 3.9 6.1 6.6 3.9 2.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) GFO_IDH_MocA PF01408.22 gi|300710910|ref|YP_003736724.1| - 1.9e-25 90.0 0.0 3.2e-25 89.3 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|300710910|ref|YP_003736724.1| - 1.3e-09 38.0 0.0 2.6e-09 37.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_2 PF03446.15 gi|300710910|ref|YP_003736724.1| - 0.00011 22.4 0.0 0.00027 21.2 0.0 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|300710910|ref|YP_003736724.1| - 0.0019 17.8 0.2 0.0045 16.6 0.2 1.6 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 gi|300710910|ref|YP_003736724.1| - 0.021 15.4 0.0 0.045 14.3 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|300710910|ref|YP_003736724.1| - 0.022 14.6 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|300710910|ref|YP_003736724.1| - 0.047 14.4 0.0 0.1 13.3 0.0 1.5 1 0 0 1 1 1 0 CoA binding domain IlvN PF07991.12 gi|300710910|ref|YP_003736724.1| - 0.048 13.2 0.1 0.1 12.1 0.0 1.6 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain DUF836 PF05768.14 gi|300710911|ref|YP_003736725.1| - 4.6e-13 49.4 0.0 5.1e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 gi|300710911|ref|YP_003736725.1| - 0.00023 21.3 0.1 0.00047 20.3 0.0 1.6 2 0 0 2 2 2 1 Glutaredoxin Thioredoxin_3 PF13192.6 gi|300710911|ref|YP_003736725.1| - 0.012 15.7 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin domain AIRS_C PF02769.22 gi|300710912|ref|YP_003736726.1| - 4.9e-23 82.0 1.3 8.4e-23 81.2 1.3 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|300710912|ref|YP_003736726.1| - 3.8e-17 62.7 1.0 1.1e-16 61.3 0.1 2.0 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain DUF397 PF04149.12 gi|300710912|ref|YP_003736726.1| - 0.16 12.0 0.2 0.36 10.9 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF397) PhoR PF11808.8 gi|300710913|ref|YP_003736727.1| - 0.06 13.8 0.3 0.075 13.5 0.3 1.1 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR Phage_holin_3_6 PF07332.11 gi|300710913|ref|YP_003736727.1| - 0.16 12.0 7.1 0.2 11.7 7.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 gi|300710913|ref|YP_003736727.1| - 5 5.8 4.6 6 5.5 4.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CRCB PF02537.15 gi|300710914|ref|YP_003736728.1| - 5.2e-18 65.1 11.7 6.2e-18 64.9 11.7 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) AFOR_N PF02730.15 gi|300710914|ref|YP_003736728.1| - 0.08 12.8 0.2 0.11 12.3 0.1 1.3 1 1 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, N-terminal domain CRCB PF02537.15 gi|300710915|ref|YP_003736729.1| - 1.4e-22 79.8 7.4 1.7e-22 79.5 7.4 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) HTH_11 PF08279.12 gi|300710916|ref|YP_003736730.1| - 1.3e-05 25.0 0.0 2.3e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|300710916|ref|YP_003736730.1| - 0.0002 20.8 0.0 0.00032 20.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300710916|ref|YP_003736730.1| - 0.0015 18.3 0.0 0.0035 17.1 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_Mga PF08280.11 gi|300710916|ref|YP_003736730.1| - 0.0048 16.9 0.0 0.0088 16.1 0.0 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_20 PF12840.7 gi|300710916|ref|YP_003736730.1| - 0.006 16.6 0.4 0.013 15.5 0.0 1.8 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300710916|ref|YP_003736730.1| - 0.0061 16.3 0.9 0.015 15.1 0.1 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|300710916|ref|YP_003736730.1| - 0.011 15.3 0.1 0.028 14.1 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|300710916|ref|YP_003736730.1| - 0.012 15.5 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_1 PF00126.27 gi|300710916|ref|YP_003736730.1| - 0.026 14.4 0.1 0.041 13.9 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF2161 PF09929.9 gi|300710916|ref|YP_003736730.1| - 0.036 14.2 0.5 0.058 13.5 0.2 1.5 2 0 0 2 2 2 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) HTH_28 PF13518.6 gi|300710916|ref|YP_003736730.1| - 0.06 13.5 0.0 0.13 12.4 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_15 PF12324.8 gi|300710916|ref|YP_003736730.1| - 0.079 12.9 1.4 0.26 11.3 0.2 2.3 1 1 2 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase Sigma70_r4 PF04545.16 gi|300710916|ref|YP_003736730.1| - 0.092 12.3 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 DUF4395 PF14340.6 gi|300710917|ref|YP_003736731.1| - 1.7 9.0 12.0 0.29 11.4 4.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4395) DUF4307 PF14155.6 gi|300710917|ref|YP_003736731.1| - 6 6.7 7.6 11 5.9 0.6 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4307) Abhydrolase_1 PF00561.20 gi|300710918|ref|YP_003736732.1| - 1.9e-08 34.3 0.0 4.9e-06 26.4 0.0 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300710918|ref|YP_003736732.1| - 2.4e-08 34.9 10.8 3.4e-08 34.4 10.8 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300710918|ref|YP_003736732.1| - 2.8e-07 30.1 0.1 0.0062 15.8 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|300710918|ref|YP_003736732.1| - 0.00074 19.6 0.0 0.0017 18.4 0.0 1.6 2 0 0 2 2 2 1 TAP-like protein Ser_hydrolase PF06821.13 gi|300710918|ref|YP_003736732.1| - 0.019 14.8 0.0 0.049 13.5 0.0 1.7 2 0 0 2 2 2 0 Serine hydrolase ECH_1 PF00378.20 gi|300710919|ref|YP_003736733.1| - 7.3e-52 176.2 0.0 8.1e-52 176.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|300710919|ref|YP_003736733.1| - 1.1e-31 110.6 0.1 1e-29 104.1 0.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF87 PF01935.17 gi|300710920|ref|YP_003736734.1| - 2.5e-11 44.1 0.3 5.6e-11 43.0 0.0 1.8 2 0 0 2 2 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|300710920|ref|YP_003736734.1| - 5.1e-05 22.1 3.5 0.00031 19.5 0.0 2.7 3 0 0 3 3 3 1 Bacterial protein of unknown function (DUF853) APS_kinase PF01583.20 gi|300710920|ref|YP_003736734.1| - 0.00012 22.0 0.1 0.0025 17.7 0.0 2.4 2 0 0 2 2 2 1 Adenylylsulphate kinase CbiA PF01656.23 gi|300710920|ref|YP_003736734.1| - 0.0002 21.4 0.0 0.00042 20.4 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 gi|300710920|ref|YP_003736734.1| - 0.00031 21.2 7.1 0.00039 20.8 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.7 gi|300710920|ref|YP_003736734.1| - 0.00055 19.0 0.0 0.05 12.5 0.0 3.0 3 0 0 3 3 3 1 AAA-like domain Uds1 PF15456.6 gi|300710920|ref|YP_003736734.1| - 0.00091 19.4 5.0 0.0018 18.4 5.0 1.4 1 0 0 1 1 1 1 Up-regulated During Septation TrwB_AAD_bind PF10412.9 gi|300710920|ref|YP_003736734.1| - 0.0044 16.0 0.1 0.011 14.7 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain LRRFIP PF09738.9 gi|300710920|ref|YP_003736734.1| - 0.0055 16.2 3.9 0.011 15.2 3.9 1.4 1 0 0 1 1 1 1 LRRFIP family DivIC PF04977.15 gi|300710920|ref|YP_003736734.1| - 0.0057 16.4 8.7 0.22 11.3 0.1 2.6 2 0 0 2 2 2 1 Septum formation initiator SlyX PF04102.12 gi|300710920|ref|YP_003736734.1| - 0.0068 17.0 3.3 0.22 12.2 0.6 2.7 2 0 0 2 2 2 1 SlyX DUF4407 PF14362.6 gi|300710920|ref|YP_003736734.1| - 0.0098 15.3 3.6 0.018 14.4 3.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF1151 PF06625.11 gi|300710920|ref|YP_003736734.1| - 0.025 14.5 0.8 0.025 14.5 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1151) APG6_N PF17675.1 gi|300710920|ref|YP_003736734.1| - 0.026 15.1 8.2 1.2 9.7 1.2 2.4 2 0 0 2 2 2 0 Apg6 coiled-coil region Tropomyosin_1 PF12718.7 gi|300710920|ref|YP_003736734.1| - 0.035 14.3 6.9 1.4 9.0 0.6 2.3 2 0 0 2 2 2 0 Tropomyosin like TMF_DNA_bd PF12329.8 gi|300710920|ref|YP_003736734.1| - 0.037 14.0 6.0 4.1 7.5 0.1 2.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding ADIP PF11559.8 gi|300710920|ref|YP_003736734.1| - 0.04 14.0 3.8 0.59 10.2 1.0 2.3 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding CoA_binding_2 PF13380.6 gi|300710920|ref|YP_003736734.1| - 0.04 14.4 0.0 0.1 13.1 0.0 1.7 1 0 0 1 1 1 0 CoA binding domain Cnn_1N PF07989.11 gi|300710920|ref|YP_003736734.1| - 0.04 14.1 1.3 13 6.1 0.0 2.5 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 DASH_Spc19 PF08287.11 gi|300710920|ref|YP_003736734.1| - 0.048 13.6 7.5 0.074 12.9 0.2 2.3 1 1 1 2 2 2 0 Spc19 AAA_22 PF13401.6 gi|300710920|ref|YP_003736734.1| - 0.055 13.8 0.3 0.2 11.9 0.0 2.0 2 1 0 2 2 1 0 AAA domain ABC_tran_CTD PF16326.5 gi|300710920|ref|YP_003736734.1| - 0.059 13.6 14.3 0.2 11.9 2.1 2.8 1 1 1 2 2 2 0 ABC transporter C-terminal domain AAA PF00004.29 gi|300710920|ref|YP_003736734.1| - 0.063 13.7 0.0 0.52 10.7 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_31 PF13614.6 gi|300710920|ref|YP_003736734.1| - 0.064 13.2 0.1 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|300710920|ref|YP_003736734.1| - 0.093 12.0 0.0 0.21 10.8 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin DivIVA PF05103.13 gi|300710920|ref|YP_003736734.1| - 0.099 12.7 2.5 4.8 7.3 0.3 2.4 2 0 0 2 2 2 0 DivIVA protein NTPase_1 PF03266.15 gi|300710920|ref|YP_003736734.1| - 0.11 12.5 0.0 0.25 11.2 0.0 1.7 1 0 0 1 1 1 0 NTPase TMCO5 PF14992.6 gi|300710920|ref|YP_003736734.1| - 0.12 11.9 1.0 0.19 11.3 1.0 1.2 1 0 0 1 1 1 0 TMCO5 family DUF641 PF04859.12 gi|300710920|ref|YP_003736734.1| - 0.12 12.7 1.8 1.5 9.1 0.6 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) DUF724 PF05266.14 gi|300710920|ref|YP_003736734.1| - 0.12 12.1 1.3 0.24 11.2 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FlaC_arch PF05377.11 gi|300710920|ref|YP_003736734.1| - 0.13 12.7 2.9 4.8 7.7 0.3 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Filament PF00038.21 gi|300710920|ref|YP_003736734.1| - 0.14 11.7 6.0 0.24 11.0 6.0 1.3 1 0 0 1 1 1 0 Intermediate filament protein CLP1_P PF16575.5 gi|300710920|ref|YP_003736734.1| - 0.14 11.9 0.0 0.46 10.3 0.0 1.8 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Val_tRNA-synt_C PF10458.9 gi|300710920|ref|YP_003736734.1| - 0.15 12.4 4.2 0.21 11.9 0.1 2.5 2 0 0 2 2 2 0 Valyl tRNA synthetase tRNA binding arm Fungal_TACC PF12709.7 gi|300710920|ref|YP_003736734.1| - 0.2 12.1 2.6 1.8 9.1 0.1 2.4 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Macoilin PF09726.9 gi|300710920|ref|YP_003736734.1| - 0.23 10.0 2.4 0.34 9.4 2.4 1.1 1 0 0 1 1 1 0 Macoilin family Swi5 PF07061.11 gi|300710920|ref|YP_003736734.1| - 0.24 11.5 2.5 24 5.1 0.6 3.1 3 0 0 3 3 3 0 Swi5 HALZ PF02183.18 gi|300710920|ref|YP_003736734.1| - 0.28 11.4 2.7 0.58 10.4 0.4 2.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF4140 PF13600.6 gi|300710920|ref|YP_003736734.1| - 0.56 10.7 7.4 3.7 8.1 2.9 2.7 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) JIP_LZII PF16471.5 gi|300710920|ref|YP_003736734.1| - 0.61 10.3 5.7 14 6.0 0.1 3.2 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II AAA_29 PF13555.6 gi|300710920|ref|YP_003736734.1| - 0.69 9.7 3.0 0.33 10.7 0.2 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain Prefoldin_2 PF01920.20 gi|300710920|ref|YP_003736734.1| - 0.7 9.9 6.7 3.8 7.5 1.4 2.4 2 0 0 2 2 2 0 Prefoldin subunit Wtap PF17098.5 gi|300710920|ref|YP_003736734.1| - 0.89 9.5 7.3 0.51 10.3 2.2 2.2 1 1 0 1 1 1 0 WTAP/Mum2p family COG2 PF06148.11 gi|300710920|ref|YP_003736734.1| - 1.3 9.1 3.7 9.7 6.3 0.9 2.7 3 0 0 3 3 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Pox_A_type_inc PF04508.12 gi|300710920|ref|YP_003736734.1| - 1.4 8.9 15.6 0.31 11.0 1.0 3.7 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat Enkurin PF13864.6 gi|300710920|ref|YP_003736734.1| - 1.9 8.9 6.2 3.3 8.2 1.8 2.5 1 1 1 2 2 2 0 Calmodulin-binding DUF2381 PF09544.10 gi|300710920|ref|YP_003736734.1| - 2.8 7.4 16.4 0.66 9.5 1.1 2.5 2 1 1 3 3 2 0 Protein of unknown function (DUF2381) BST2 PF16716.5 gi|300710920|ref|YP_003736734.1| - 3.3 8.4 6.0 4.6 7.9 1.7 2.3 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 ZapB PF06005.12 gi|300710920|ref|YP_003736734.1| - 3.3 8.2 12.5 3 8.3 0.1 2.9 3 0 0 3 3 2 0 Cell division protein ZapB AAA_23 PF13476.6 gi|300710920|ref|YP_003736734.1| - 3.5 8.1 4.3 5.7 7.4 0.1 2.3 2 0 0 2 2 2 0 AAA domain CENP-F_leu_zip PF10473.9 gi|300710920|ref|YP_003736734.1| - 3.5 7.6 11.0 80 3.2 11.0 2.3 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HR1 PF02185.16 gi|300710920|ref|YP_003736734.1| - 3.8 7.7 10.6 0.72 10.0 2.3 2.3 1 1 1 2 2 2 0 Hr1 repeat bZIP_2 PF07716.15 gi|300710920|ref|YP_003736734.1| - 5.1 7.3 15.8 2.4 8.3 1.6 2.8 2 0 0 2 2 2 0 Basic region leucine zipper GreA_GreB_N PF03449.15 gi|300710920|ref|YP_003736734.1| - 5.2 7.3 9.7 23 5.2 0.4 3.2 2 1 0 2 2 2 0 Transcription elongation factor, N-terminal Spc7 PF08317.11 gi|300710920|ref|YP_003736734.1| - 6.9 5.5 8.9 19 4.0 8.9 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Atg14 PF10186.9 gi|300710920|ref|YP_003736734.1| - 8.4 5.4 6.4 29 3.6 6.3 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Nop PF01798.18 gi|300710921|ref|YP_003736735.1| - 2e-35 122.3 0.0 3.6e-35 121.5 0.0 1.5 1 1 0 1 1 1 1 snoRNA binding domain, fibrillarin Trehalose_PPase PF02358.16 gi|300710921|ref|YP_003736735.1| - 0.087 11.9 0.0 0.17 11.0 0.0 1.4 2 0 0 2 2 2 0 Trehalose-phosphatase Lumazine_bd_2 PF12893.7 gi|300710921|ref|YP_003736735.1| - 0.33 11.6 1.4 5 7.8 0.0 2.7 2 1 1 3 3 3 0 Putative lumazine-binding Fibrillarin PF01269.17 gi|300710922|ref|YP_003736736.1| - 1e-55 188.3 0.0 1.3e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin GCS2 PF04107.13 gi|300710923|ref|YP_003736737.1| - 1.5e-74 251.0 0.3 9.9e-74 248.3 0.3 1.9 1 1 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) GCS PF03074.16 gi|300710923|ref|YP_003736737.1| - 0.14 11.5 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Glutamate-cysteine ligase Amidoligase_2 PF12224.8 gi|300710923|ref|YP_003736737.1| - 0.15 11.7 0.0 15 5.2 0.0 2.4 2 0 0 2 2 2 0 Putative amidoligase enzyme EF-hand_1 PF00036.32 gi|300710923|ref|YP_003736737.1| - 0.18 11.5 0.2 0.55 9.9 0.0 2.0 2 0 0 2 2 2 0 EF hand TrmB PF01978.19 gi|300710924|ref|YP_003736738.1| - 3e-06 27.0 0.1 4.6e-06 26.4 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|300710924|ref|YP_003736738.1| - 4.2e-05 23.0 0.0 7.5e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|300710924|ref|YP_003736738.1| - 0.0015 18.1 0.1 0.0027 17.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|300710924|ref|YP_003736738.1| - 0.0052 16.8 0.0 0.0077 16.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300710924|ref|YP_003736738.1| - 0.01 15.6 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|300710924|ref|YP_003736738.1| - 0.053 13.4 0.0 0.079 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|300710924|ref|YP_003736738.1| - 0.061 13.3 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|300710924|ref|YP_003736738.1| - 0.063 13.6 0.0 0.098 13.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator DUF3489 PF11994.8 gi|300710924|ref|YP_003736738.1| - 0.1 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) MarR_2 PF12802.7 gi|300710924|ref|YP_003736738.1| - 0.12 12.3 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 MarR family TetR_C_24 PF17932.1 gi|300710924|ref|YP_003736738.1| - 0.14 12.4 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CTP_transf_like PF01467.26 gi|300710925|ref|YP_003736739.1| - 4.3e-10 39.9 0.0 5.5e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|300710925|ref|YP_003736739.1| - 0.0021 17.9 0.2 0.011 15.6 0.2 1.9 2 0 0 2 2 2 1 FAD synthetase HTH_28 PF13518.6 gi|300710927|ref|YP_003736741.1| - 0.0033 17.5 0.0 0.0068 16.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|300710927|ref|YP_003736741.1| - 0.0048 16.7 0.4 0.013 15.3 0.1 1.9 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TFIIB PF00382.19 gi|300710927|ref|YP_003736741.1| - 0.032 14.3 0.1 0.045 13.8 0.1 1.4 1 1 0 1 1 1 0 Transcription factor TFIIB repeat HTH_23 PF13384.6 gi|300710927|ref|YP_003736741.1| - 0.1 12.4 0.2 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 Homeodomain-like domain DisA_N PF02457.16 gi|300710929|ref|YP_003736743.1| - 2.4e-20 72.3 0.0 4.4e-20 71.4 0.0 1.4 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding PK_C PF02887.16 gi|300710929|ref|YP_003736743.1| - 0.014 15.6 0.0 0.074 13.3 0.0 2.2 1 1 0 1 1 1 0 Pyruvate kinase, alpha/beta domain MS_channel PF00924.18 gi|300710930|ref|YP_003736744.1| - 1.2e-15 57.6 1.3 1.2e-15 57.6 1.3 2.3 2 0 0 2 2 2 2 Mechanosensitive ion channel FtsX PF02687.21 gi|300710930|ref|YP_003736744.1| - 0.03 14.8 5.4 0.03 14.8 5.4 3.1 1 1 1 3 3 3 0 FtsX-like permease family Hexapep PF00132.24 gi|300710931|ref|YP_003736745.1| - 1.9e-07 30.5 5.3 2e-06 27.3 0.4 3.0 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300710931|ref|YP_003736745.1| - 1.6e-06 27.7 6.4 4.5e-06 26.3 0.5 3.0 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase DAO PF01266.24 gi|300710932|ref|YP_003736746.1| - 7e-50 170.6 9.4 1.1e-49 170.0 9.4 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Rieske PF00355.26 gi|300710932|ref|YP_003736746.1| - 2.1e-15 56.4 0.0 3.9e-13 49.2 0.0 2.4 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain FAD_binding_2 PF00890.24 gi|300710932|ref|YP_003736746.1| - 2.4e-09 36.8 4.2 3.8e-09 36.1 4.2 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|300710932|ref|YP_003736746.1| - 1.1e-06 28.8 0.9 3.7e-06 27.1 0.9 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|300710932|ref|YP_003736746.1| - 1.5e-06 27.7 0.6 2.4e-06 27.0 0.6 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300710932|ref|YP_003736746.1| - 1.8e-06 27.4 2.3 4.9e-06 26.0 2.3 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|300710932|ref|YP_003736746.1| - 2.5e-05 23.8 2.7 0.011 15.0 0.3 2.2 1 1 1 2 2 2 2 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|300710932|ref|YP_003736746.1| - 5.3e-05 22.1 0.4 0.00011 21.1 0.3 1.5 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|300710932|ref|YP_003736746.1| - 7.5e-05 22.1 0.3 0.00031 20.1 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|300710932|ref|YP_003736746.1| - 0.00027 20.3 0.1 0.00056 19.2 0.1 1.5 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|300710932|ref|YP_003736746.1| - 0.00028 20.1 0.7 0.00042 19.5 0.7 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|300710932|ref|YP_003736746.1| - 0.00095 18.6 5.2 0.00095 18.6 5.2 2.0 2 1 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|300710932|ref|YP_003736746.1| - 0.0012 18.0 0.2 0.0016 17.6 0.2 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|300710932|ref|YP_003736746.1| - 0.0014 17.6 0.8 0.0025 16.7 0.8 1.4 1 0 0 1 1 1 1 Tryptophan halogenase Pyr_redox PF00070.27 gi|300710932|ref|YP_003736746.1| - 0.0028 18.2 2.2 0.0037 17.8 1.0 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|300710932|ref|YP_003736746.1| - 0.0038 16.6 0.5 0.0075 15.6 0.5 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 gi|300710932|ref|YP_003736746.1| - 0.063 13.3 3.1 0.13 12.3 0.4 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|300710932|ref|YP_003736746.1| - 0.072 12.7 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|300710932|ref|YP_003736746.1| - 0.15 12.5 3.6 0.57 10.7 3.6 2.1 1 1 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|300710932|ref|YP_003736746.1| - 0.26 11.5 1.5 0.39 11.0 0.2 2.1 2 0 0 2 2 2 0 TrkA-N domain 3HCDH_N PF02737.18 gi|300710932|ref|YP_003736746.1| - 0.36 10.7 4.5 1.6 8.5 4.5 1.9 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GARS_A PF01071.19 gi|300710933|ref|YP_003736747.1| - 1.7e-50 171.5 0.0 3e-50 170.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|300710933|ref|YP_003736747.1| - 3.9e-21 75.6 0.1 8.3e-21 74.6 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|300710933|ref|YP_003736747.1| - 2.9e-14 53.1 0.4 8.1e-14 51.7 0.4 1.8 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|300710933|ref|YP_003736747.1| - 0.00058 20.0 0.0 0.00097 19.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|300710933|ref|YP_003736747.1| - 0.015 14.6 0.0 0.03 13.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp CPSase_L_D2 PF02786.17 gi|300710933|ref|YP_003736747.1| - 0.071 12.6 0.0 0.19 11.2 0.0 1.7 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain MR_MLE_C PF13378.6 gi|300710934|ref|YP_003736748.1| - 5.5e-67 225.6 0.1 8.4e-67 224.9 0.1 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300710934|ref|YP_003736748.1| - 1e-19 70.9 0.0 3.1e-19 69.3 0.0 1.8 2 0 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Trep_Strep PF09605.10 gi|300710935|ref|YP_003736749.1| - 0.19 11.7 7.5 0.21 11.5 7.5 1.0 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) SOP4 PF17081.5 gi|300710935|ref|YP_003736749.1| - 0.29 10.6 0.6 0.33 10.4 0.6 1.1 1 0 0 1 1 1 0 Suppressor of PMA 1-7 protein DUF5379 PF17350.2 gi|300710935|ref|YP_003736749.1| - 0.59 10.4 6.5 1.8 8.9 6.6 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5379) GntP_permease PF02447.16 gi|300710936|ref|YP_003736750.1| - 4.4e-96 322.3 31.5 5.1e-96 322.1 31.5 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 gi|300710936|ref|YP_003736750.1| - 1.8e-15 56.9 30.0 1.8e-15 56.9 30.0 2.2 1 1 1 2 2 2 1 Citrate transporter RbcS PF12338.8 gi|300710936|ref|YP_003736750.1| - 0.19 12.0 0.8 0.59 10.4 0.8 1.8 1 0 0 1 1 1 0 Ribulose-1,5-bisphosphate carboxylase small subunit Pyr_redox_2 PF07992.14 gi|300710937|ref|YP_003736751.1| - 5.3e-19 68.6 11.2 6.9e-12 45.2 1.8 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300710937|ref|YP_003736751.1| - 2.2e-13 50.2 0.1 1.2e-07 31.3 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|300710937|ref|YP_003736751.1| - 7.3e-12 45.5 1.5 8.6e-06 25.6 0.1 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300710937|ref|YP_003736751.1| - 5.2e-10 38.6 0.1 9.7e-05 21.2 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 gi|300710937|ref|YP_003736751.1| - 1.2e-07 31.4 0.8 5.1e-06 26.0 0.0 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|300710937|ref|YP_003736751.1| - 1.7e-07 30.7 3.1 3.4e-06 26.4 0.5 2.2 1 1 1 2 2 2 2 FAD binding domain GIDA PF01134.22 gi|300710937|ref|YP_003736751.1| - 5.5e-06 25.7 0.9 0.00011 21.5 0.3 2.1 1 1 1 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|300710937|ref|YP_003736751.1| - 1.8e-05 24.8 0.4 0.064 13.2 0.0 2.5 2 0 0 2 2 2 2 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|300710937|ref|YP_003736751.1| - 2.1e-05 24.7 0.0 6.5e-05 23.1 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|300710937|ref|YP_003736751.1| - 5e-05 22.7 0.1 8.2e-05 22.0 0.1 1.5 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|300710937|ref|YP_003736751.1| - 6.8e-05 22.4 0.7 6.8e-05 22.4 0.7 1.8 1 1 1 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|300710937|ref|YP_003736751.1| - 0.0071 15.4 0.7 0.025 13.6 0.3 1.8 1 1 1 2 2 2 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|300710937|ref|YP_003736751.1| - 0.026 13.4 3.6 1.8 7.4 0.5 2.1 2 0 0 2 2 2 0 Tryptophan halogenase K_oxygenase PF13434.6 gi|300710937|ref|YP_003736751.1| - 0.032 13.4 0.1 1.1 8.3 0.1 2.0 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|300710937|ref|YP_003736751.1| - 0.051 12.9 0.1 0.08 12.2 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|300710937|ref|YP_003736751.1| - 0.096 12.6 0.5 0.19 11.6 0.1 1.6 1 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TANGO2 PF05742.12 gi|300710939|ref|YP_003736753.1| - 1.2e-26 94.3 0.0 5.3e-26 92.2 0.0 1.8 1 1 0 1 1 1 1 Transport and Golgi organisation 2 SUI1 PF01253.22 gi|300710940|ref|YP_003736754.1| - 1e-17 64.4 0.0 1.3e-17 64.0 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|300710940|ref|YP_003736754.1| - 0.045 14.0 0.0 0.052 13.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Thioredox_DsbH PF03190.15 gi|300710941|ref|YP_003736755.1| - 1.2e-73 246.5 0.0 2.4e-73 245.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|300710941|ref|YP_003736755.1| - 3.6e-10 39.9 0.0 7.4e-10 38.9 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like GlcNAc_2-epim PF07221.11 gi|300710941|ref|YP_003736755.1| - 0.00045 19.6 0.4 0.52 9.5 0.0 3.0 2 1 0 2 2 2 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Thioredoxin PF00085.20 gi|300710942|ref|YP_003736756.1| - 2.7e-06 27.3 0.0 3.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_9 PF14595.6 gi|300710942|ref|YP_003736756.1| - 0.0004 20.2 0.0 0.0013 18.5 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|300710942|ref|YP_003736756.1| - 0.15 12.4 0.0 14 6.1 0.0 2.2 1 1 1 2 2 2 0 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|300710942|ref|YP_003736756.1| - 0.2 12.1 0.0 0.56 10.7 0.0 1.8 1 1 0 1 1 1 0 Thioredoxin-like domain Redoxin PF08534.10 gi|300710942|ref|YP_003736756.1| - 0.22 11.2 0.0 18 5.0 0.0 2.1 1 1 0 2 2 2 0 Redoxin MFS_1 PF07690.16 gi|300710943|ref|YP_003736757.1| - 4.3e-40 137.7 67.4 1.4e-30 106.5 41.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 gi|300710943|ref|YP_003736757.1| - 0.0023 16.8 4.9 0.0023 16.8 4.9 2.7 1 1 2 3 3 3 2 LacY proton/sugar symporter ERG4_ERG24 PF01222.17 gi|300710943|ref|YP_003736757.1| - 0.011 14.6 0.4 0.041 12.6 0.1 1.9 2 0 0 2 2 2 0 Ergosterol biosynthesis ERG4/ERG24 family TMEM125 PF15109.6 gi|300710943|ref|YP_003736757.1| - 4.6 7.6 8.4 0.25 11.7 1.0 2.6 3 0 0 3 3 3 0 TMEM125 protein family PALP PF00291.25 gi|300710944|ref|YP_003736758.1| - 1.3e-63 215.2 2.7 1.6e-63 214.9 2.7 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.26 gi|300710944|ref|YP_003736758.1| - 0.00035 20.6 0.5 0.00099 19.1 0.5 1.8 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Pribosyltran PF00156.27 gi|300710944|ref|YP_003736758.1| - 0.1 12.1 0.0 0.24 10.9 0.0 1.6 1 0 0 1 1 1 0 Phosphoribosyl transferase domain DUF1203 PF06718.11 gi|300710944|ref|YP_003736758.1| - 0.12 12.7 0.0 0.79 10.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1203) ThiI PF02568.14 gi|300710946|ref|YP_003736760.1| - 7.4e-42 143.2 0.0 9.9e-42 142.8 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|300710946|ref|YP_003736760.1| - 1.7e-12 47.7 0.0 3.4e-12 46.7 0.0 1.5 1 0 0 1 1 1 1 THUMP domain QueC PF06508.13 gi|300710946|ref|YP_003736760.1| - 6.5e-05 22.5 0.0 0.071 12.6 0.0 2.2 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|300710946|ref|YP_003736760.1| - 0.036 12.9 0.0 0.051 12.4 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase AdoMet_Synthase PF01941.19 gi|300710947|ref|YP_003736761.1| - 1.4e-172 573.9 3.6 1.6e-172 573.8 3.6 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) S-AdoMet_synt_N PF00438.20 gi|300710947|ref|YP_003736761.1| - 0.084 13.6 0.1 0.54 11.0 0.0 2.3 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain Asp23 PF03780.13 gi|300710947|ref|YP_003736761.1| - 1.4 9.4 5.0 3.5 8.1 0.8 3.3 3 1 0 3 3 3 0 Asp23 family, cell envelope-related function CYTH PF01928.21 gi|300710948|ref|YP_003736762.1| - 2.1e-34 119.0 3.3 2.5e-34 118.8 3.3 1.0 1 0 0 1 1 1 1 CYTH domain Peptidase_M6 PF05547.11 gi|300710948|ref|YP_003736762.1| - 0.1 10.9 0.0 0.12 10.6 0.0 1.1 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 AhpC-TSA PF00578.21 gi|300710949|ref|YP_003736763.1| - 7.7e-08 32.3 0.0 1.1e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 gi|300710949|ref|YP_003736763.1| - 2.5e-07 30.9 0.0 4.2e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 gi|300710949|ref|YP_003736763.1| - 4e-06 26.6 0.1 5.7e-06 26.1 0.1 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 gi|300710949|ref|YP_003736763.1| - 0.00011 22.6 0.0 0.00021 21.7 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like domain DUF2666 PF10869.8 gi|300710949|ref|YP_003736763.1| - 0.0037 17.5 1.9 0.07 13.3 1.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2666) sCache_like PF16736.5 gi|300710949|ref|YP_003736763.1| - 0.037 14.1 0.0 0.11 12.6 0.0 1.8 2 0 0 2 2 2 0 Single Cache-like zf-HC2 PF13490.6 gi|300710949|ref|YP_003736763.1| - 0.08 13.2 5.3 0.24 11.7 1.2 2.6 1 1 0 2 2 2 0 Putative zinc-finger cwf21 PF08312.12 gi|300710949|ref|YP_003736763.1| - 0.14 12.4 1.9 0.58 10.3 0.0 2.5 1 1 1 2 2 2 0 cwf21 domain Herpes_LMP1 PF05297.11 gi|300710949|ref|YP_003736763.1| - 1.4 8.0 4.6 1.6 7.9 4.6 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) HTH_psq PF05225.16 gi|300710949|ref|YP_003736763.1| - 1.6 8.5 3.2 7.8 6.3 0.0 2.9 3 0 0 3 3 3 0 helix-turn-helix, Psq domain FKBP_C PF00254.28 gi|300710950|ref|YP_003736764.1| - 2e-06 28.1 0.1 3.8e-06 27.1 0.1 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase ScdA_N PF04405.14 gi|300710950|ref|YP_003736764.1| - 0.033 13.9 0.3 0.1 12.3 0.3 1.8 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) ATPase PF06745.13 gi|300710951|ref|YP_003736765.1| - 4e-10 39.4 0.0 3.3e-05 23.4 0.0 2.3 2 1 0 2 2 2 2 KaiC Importin_rep_3 PF18806.1 gi|300710951|ref|YP_003736765.1| - 0.042 13.9 0.0 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat PAXNEB PF05625.11 gi|300710951|ref|YP_003736765.1| - 0.22 10.6 0.1 1 8.4 0.1 1.8 2 0 0 2 2 2 0 PAXNEB protein OTCace_N PF02729.21 gi|300710952|ref|YP_003736766.1| - 2.4e-43 147.7 0.0 3.7e-43 147.1 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|300710952|ref|YP_003736766.1| - 3.2e-26 92.3 0.0 4.2e-26 91.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PyrI PF01948.18 gi|300710953|ref|YP_003736767.1| - 2.1e-32 111.2 0.2 2.7e-32 110.9 0.2 1.1 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|300710953|ref|YP_003736767.1| - 4.3e-12 45.7 0.1 8.7e-12 44.8 0.1 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain Usp PF00582.26 gi|300710954|ref|YP_003736768.1| - 5.5e-28 98.2 0.0 6.5e-28 98.0 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Asparaginase_C PF17763.1 gi|300710954|ref|YP_003736768.1| - 0.047 13.9 0.1 0.054 13.7 0.1 1.2 1 1 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain Terminase_GpA PF05876.12 gi|300710954|ref|YP_003736768.1| - 0.14 10.7 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) DUF4173 PF13777.6 gi|300710955|ref|YP_003736769.1| - 0.075 12.5 0.1 0.11 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) NUDIX PF00293.28 gi|300710957|ref|YP_003736771.1| - 1.3e-15 57.6 0.8 1.3e-15 57.6 0.8 1.5 2 0 0 2 2 2 1 NUDIX domain LBR_tudor PF09465.10 gi|300710958|ref|YP_003736772.1| - 0.0015 18.3 0.1 0.0038 17.0 0.0 1.7 1 1 1 2 2 2 1 Lamin-B receptor of TUDOR domain DUF1918 PF08940.11 gi|300710958|ref|YP_003736772.1| - 0.0082 15.7 0.0 0.009 15.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1918) RNA_binding PF01877.17 gi|300710959|ref|YP_003736773.1| - 1.3e-31 109.3 0.0 1.6e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 RNA binding AA_permease_2 PF13520.6 gi|300710960|ref|YP_003736774.1| - 2.3e-42 145.3 43.1 2.8e-42 145.0 43.1 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|300710960|ref|YP_003736774.1| - 3.2e-37 128.3 39.1 4.2e-37 127.9 39.1 1.1 1 0 0 1 1 1 1 Amino acid permease AMP-binding PF00501.28 gi|300710961|ref|YP_003736775.1| - 2.1e-34 118.9 0.0 6.2e-20 71.2 0.0 2.3 1 1 1 2 2 2 2 AMP-binding enzyme TPP_enzyme_N PF02776.18 gi|300710962|ref|YP_003736776.1| - 2e-52 177.3 0.0 3.5e-52 176.5 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|300710962|ref|YP_003736776.1| - 8.5e-32 110.1 0.0 1.8e-31 109.0 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|300710962|ref|YP_003736776.1| - 3.2e-29 101.4 0.1 1.2e-28 99.6 0.1 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Usp PF00582.26 gi|300710963|ref|YP_003736777.1| - 4.9e-33 114.6 4.7 5.4e-33 114.5 4.7 1.0 1 0 0 1 1 1 1 Universal stress protein family Toprim_2 PF13155.6 gi|300710963|ref|YP_003736777.1| - 0.041 14.3 0.1 6.1 7.3 0.0 2.4 1 1 1 2 2 2 0 Toprim-like Radical_SAM PF04055.21 gi|300710963|ref|YP_003736777.1| - 0.068 13.5 0.1 0.076 13.4 0.1 1.2 1 0 0 1 1 1 0 Radical SAM superfamily SRP54 PF00448.22 gi|300710963|ref|YP_003736777.1| - 0.13 11.9 0.2 6.5 6.3 0.1 2.0 1 1 1 2 2 2 0 SRP54-type protein, GTPase domain CarboxypepD_reg PF13620.6 gi|300710964|ref|YP_003736778.1| - 5.6e-06 26.5 0.8 1.2e-05 25.4 0.6 1.7 1 1 1 2 2 2 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|300710964|ref|YP_003736778.1| - 0.0033 17.4 0.1 0.0079 16.2 0.1 1.7 1 1 0 1 1 1 1 CarboxypepD_reg-like domain PEGA PF08308.11 gi|300710964|ref|YP_003736778.1| - 0.0038 17.1 0.6 0.01 15.7 0.3 1.7 2 0 0 2 2 2 1 PEGA domain Big_1 PF02369.16 gi|300710964|ref|YP_003736778.1| - 0.047 13.7 0.1 0.083 12.9 0.1 1.5 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 gi|300710964|ref|YP_003736778.1| - 0.069 13.5 0.3 0.096 13.0 0.3 1.2 1 0 0 1 1 1 0 Invasin, domain 3 Aldedh PF00171.22 gi|300710965|ref|YP_003736779.1| - 1.2e-148 495.5 0.0 1.3e-148 495.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 gi|300710965|ref|YP_003736779.1| - 0.2 11.1 0.0 0.46 9.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) zf-CSL PF05207.13 gi|300710966|ref|YP_003736780.1| - 0.00029 20.5 0.3 0.00033 20.3 0.3 1.1 1 0 0 1 1 1 1 CSL zinc finger zf-C2H2 PF00096.26 gi|300710966|ref|YP_003736780.1| - 0.0018 18.6 0.2 2.7 8.6 0.0 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf_UBZ PF18439.1 gi|300710966|ref|YP_003736780.1| - 0.0025 17.3 0.7 0.22 11.2 0.1 2.0 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|300710966|ref|YP_003736780.1| - 0.0033 17.5 1.5 0.0046 17.0 1.5 1.4 1 1 0 1 1 1 1 Zinc ribbon domain DUF35_N PF12172.8 gi|300710966|ref|YP_003736780.1| - 0.0061 16.4 1.7 0.1 12.5 0.1 2.2 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C2H2_4 PF13894.6 gi|300710966|ref|YP_003736780.1| - 0.0063 17.3 0.2 3.3 8.8 0.0 2.2 2 0 0 2 2 2 1 C2H2-type zinc finger zf-NADH-PPase PF09297.11 gi|300710966|ref|YP_003736780.1| - 0.0097 15.5 3.3 0.88 9.3 0.3 2.2 2 0 0 2 2 2 2 NADH pyrophosphatase zinc ribbon domain DZR PF12773.7 gi|300710966|ref|YP_003736780.1| - 0.028 14.5 0.2 0.033 14.2 0.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|300710966|ref|YP_003736780.1| - 0.029 13.8 2.8 0.39 10.2 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-LITAF-like PF10601.9 gi|300710966|ref|YP_003736780.1| - 0.031 14.5 0.6 0.21 11.9 0.1 2.0 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zf-RING_7 PF02591.15 gi|300710966|ref|YP_003736780.1| - 0.047 13.9 6.1 0.24 11.6 6.1 2.0 1 1 0 1 1 1 0 C4-type zinc ribbon domain Methyltransf_13 PF08421.11 gi|300710966|ref|YP_003736780.1| - 0.05 13.9 0.9 0.083 13.1 0.9 1.4 1 1 0 1 1 1 0 Putative zinc binding domain Lar_restr_allev PF14354.6 gi|300710966|ref|YP_003736780.1| - 0.055 13.9 0.4 0.062 13.7 0.4 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-IS66 PF13005.7 gi|300710966|ref|YP_003736780.1| - 0.06 13.8 2.7 4.4 7.8 0.1 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf_Rg PF17915.1 gi|300710966|ref|YP_003736780.1| - 0.067 12.6 1.1 7.3 6.1 0.1 2.1 2 0 0 2 2 2 0 Reverse gyrase zinc finger Zn_ribbon_recom PF13408.6 gi|300710966|ref|YP_003736780.1| - 0.092 13.3 3.4 4.9 7.7 0.5 2.1 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain HypA PF01155.19 gi|300710966|ref|YP_003736780.1| - 0.14 12.2 0.2 0.14 12.2 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CpXC PF14353.6 gi|300710966|ref|YP_003736780.1| - 0.2 11.7 0.9 2 8.5 0.1 2.0 1 1 1 2 2 2 0 CpXC protein TF_Zn_Ribbon PF08271.12 gi|300710966|ref|YP_003736780.1| - 0.27 10.8 4.3 1.8 8.2 4.3 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding zf-C2HC_2 PF13913.6 gi|300710966|ref|YP_003736780.1| - 0.34 10.9 4.9 1.4 8.9 0.3 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zinc_ribbon_5 PF13719.6 gi|300710966|ref|YP_003736780.1| - 0.55 10.0 2.8 3.5 7.5 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|300710966|ref|YP_003736780.1| - 0.85 9.0 6.5 5.5 6.4 6.5 1.9 1 1 0 1 1 1 0 Transcription factor zinc-finger HSP20 PF00011.21 gi|300710967|ref|YP_003736781.1| - 6.4e-27 93.7 0.1 9.5e-27 93.1 0.1 1.3 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|300710967|ref|YP_003736781.1| - 3.5e-14 52.1 0.0 6.3e-14 51.3 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA PIH1_CS PF18201.1 gi|300710967|ref|YP_003736781.1| - 0.00029 21.2 0.0 0.00056 20.3 0.0 1.4 1 1 0 1 1 1 1 PIH1 CS-like domain CS PF04969.16 gi|300710967|ref|YP_003736781.1| - 0.017 16.1 0.0 0.022 15.8 0.0 1.1 1 0 0 1 1 1 0 CS domain Frataxin_Cyay PF01491.16 gi|300710967|ref|YP_003736781.1| - 0.12 12.5 0.0 4.7 7.3 0.0 2.5 1 1 1 2 2 2 0 Frataxin-like domain RNase_P_p30 PF01876.16 gi|300710968|ref|YP_003736782.1| - 2.2e-31 109.0 0.0 3e-31 108.6 0.0 1.2 1 0 0 1 1 1 1 RNase P subunit p30 Methyltransf_25 PF13649.6 gi|300710969|ref|YP_003736783.1| - 1.3e-19 70.7 0.0 2.3e-19 69.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300710969|ref|YP_003736783.1| - 5.3e-16 58.8 0.0 8e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300710969|ref|YP_003736783.1| - 1.6e-15 57.5 0.0 2.5e-15 56.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300710969|ref|YP_003736783.1| - 4.6e-13 49.8 0.0 7.8e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300710969|ref|YP_003736783.1| - 6.1e-10 38.8 0.0 8.3e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|300710969|ref|YP_003736783.1| - 9.4e-08 32.1 0.0 1.5e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|300710969|ref|YP_003736783.1| - 2.2e-07 30.6 0.0 3.3e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|300710969|ref|YP_003736783.1| - 6.7e-05 22.3 0.0 0.0001 21.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|300710969|ref|YP_003736783.1| - 7.4e-05 22.8 0.0 0.0001 22.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|300710969|ref|YP_003736783.1| - 0.00015 21.3 0.0 0.00019 20.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|300710969|ref|YP_003736783.1| - 0.0019 17.3 0.0 0.0029 16.7 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase PCMT PF01135.19 gi|300710969|ref|YP_003736783.1| - 0.0027 17.5 0.0 0.0035 17.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) tRNA_U5-meth_tr PF05958.11 gi|300710969|ref|YP_003736783.1| - 0.003 16.6 0.0 0.0042 16.1 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_18 PF12847.7 gi|300710969|ref|YP_003736783.1| - 0.0038 17.2 0.0 0.0062 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|300710969|ref|YP_003736783.1| - 0.0088 15.5 0.0 0.014 14.9 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase NodS PF05401.11 gi|300710969|ref|YP_003736783.1| - 0.043 13.4 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) TPMT PF05724.11 gi|300710969|ref|YP_003736783.1| - 0.047 13.4 0.0 0.062 12.9 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Pox_MCEL PF03291.16 gi|300710969|ref|YP_003736783.1| - 0.078 12.1 0.0 2 7.5 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme RrnaAD PF00398.20 gi|300710969|ref|YP_003736783.1| - 0.079 12.0 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase UPF0020 PF01170.18 gi|300710969|ref|YP_003736783.1| - 0.15 11.7 0.1 3.6 7.2 0.1 2.1 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 MetW PF07021.12 gi|300710969|ref|YP_003736783.1| - 0.19 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW BCCT PF02028.17 gi|300710970|ref|YP_003736784.1| - 3e-115 385.5 46.5 3.4e-115 385.3 46.5 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DnaJ PF00226.31 gi|300710971|ref|YP_003736785.1| - 7.4e-16 58.0 0.0 1.1e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain SurE PF01975.17 gi|300710972|ref|YP_003736786.1| - 3e-48 164.2 0.1 3.8e-48 163.8 0.1 1.1 1 0 0 1 1 1 1 Survival protein SurE Methyltransf_12 PF08242.12 gi|300710973|ref|YP_003736787.1| - 1.6e-06 28.8 0.0 3.1e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300710973|ref|YP_003736787.1| - 3.6e-05 23.7 0.0 6.1e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Rsm22 PF09243.10 gi|300710973|ref|YP_003736787.1| - 0.0029 16.9 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_31 PF13847.6 gi|300710973|ref|YP_003736787.1| - 0.012 15.4 0.0 2.8 7.7 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain PDH PF02153.17 gi|300710974|ref|YP_003736788.1| - 3.9e-17 62.1 0.0 2.1e-15 56.5 0.0 2.0 1 1 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.17 gi|300710974|ref|YP_003736788.1| - 3.5e-09 37.1 0.5 1.2e-06 29.0 0.2 2.3 2 0 0 2 2 2 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 gi|300710974|ref|YP_003736788.1| - 0.0046 17.4 0.5 3.1 8.3 0.0 2.3 2 0 0 2 2 2 2 Putative NAD(P)-binding ApbA PF02558.16 gi|300710974|ref|YP_003736788.1| - 0.017 14.8 0.4 0.18 11.5 0.2 2.3 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 gi|300710974|ref|YP_003736788.1| - 0.038 13.9 2.9 0.089 12.7 0.9 2.3 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|300710974|ref|YP_003736788.1| - 0.059 13.6 0.4 2 8.7 0.1 2.5 2 0 0 2 2 2 0 TrkA-N domain GFO_IDH_MocA PF01408.22 gi|300710974|ref|YP_003736788.1| - 0.064 14.1 1.3 0.17 12.7 0.2 2.2 1 1 1 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|300710974|ref|YP_003736788.1| - 0.13 11.7 0.3 0.69 9.2 0.0 2.2 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Peptidase_M24 PF00557.24 gi|300710975|ref|YP_003736789.1| - 3.5e-49 167.3 0.3 4.4e-49 167.0 0.3 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|300710975|ref|YP_003736789.1| - 2.1e-07 31.6 0.0 5e-07 30.4 0.0 1.7 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Phage-A118_gp45 PF10653.9 gi|300710975|ref|YP_003736789.1| - 0.028 14.4 0.1 0.053 13.5 0.1 1.4 1 0 0 1 1 1 0 Protein gp45 of Bacteriophage A118 Nramp PF01566.18 gi|300710976|ref|YP_003736790.1| - 2e-43 148.8 27.3 2.7e-43 148.3 27.3 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein ABC2_membrane_2 PF12679.7 gi|300710977|ref|YP_003736791.1| - 4.4e-20 72.1 20.1 5.2e-20 71.9 20.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|300710977|ref|YP_003736791.1| - 2.2e-08 33.9 5.7 2.2e-08 33.9 5.7 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|300710977|ref|YP_003736791.1| - 5.8e-08 32.4 6.5 9.7e-08 31.7 6.5 1.4 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|300710977|ref|YP_003736791.1| - 6.3e-06 25.5 9.5 6.3e-06 25.5 9.5 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|300710977|ref|YP_003736791.1| - 0.38 10.7 13.3 0.21 11.5 10.5 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|300710978|ref|YP_003736792.1| - 2.3e-24 86.5 0.0 3.6e-24 85.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300710978|ref|YP_003736792.1| - 9.2e-11 42.1 1.2 1.1e-05 25.4 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|300710978|ref|YP_003736792.1| - 0.00073 20.2 0.0 0.0015 19.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|300710978|ref|YP_003736792.1| - 0.012 16.1 0.1 0.02 15.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|300710978|ref|YP_003736792.1| - 0.018 14.8 0.0 0.039 13.7 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|300710978|ref|YP_003736792.1| - 0.023 15.1 0.1 0.047 14.1 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|300710978|ref|YP_003736792.1| - 0.036 13.8 0.1 0.065 13.0 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|300710978|ref|YP_003736792.1| - 0.05 13.2 0.0 0.094 12.3 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_27 PF13514.6 gi|300710978|ref|YP_003736792.1| - 0.072 12.7 0.0 0.19 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|300710978|ref|YP_003736792.1| - 0.076 13.2 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain Prok_Ub PF14454.6 gi|300710978|ref|YP_003736792.1| - 0.11 12.1 0.0 4.4 7.0 0.0 2.9 3 0 0 3 3 3 0 Prokaryotic Ubiquitin AAA_22 PF13401.6 gi|300710978|ref|YP_003736792.1| - 0.12 12.7 0.2 0.37 11.1 0.2 2.0 1 1 0 1 1 1 0 AAA domain TetR_N PF00440.23 gi|300710979|ref|YP_003736793.1| - 2.2e-07 30.5 0.0 4.8e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_7 PF02796.15 gi|300710979|ref|YP_003736793.1| - 0.16 12.0 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase EPSP_synthase PF00275.20 gi|300710981|ref|YP_003736795.1| - 3.3e-105 352.2 0.0 4.6e-105 351.7 0.0 1.1 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Cu_amine_oxidN1 PF07833.11 gi|300710981|ref|YP_003736795.1| - 0.14 12.6 0.0 0.37 11.3 0.0 1.7 1 0 0 1 1 1 0 Copper amine oxidase N-terminal domain Chorismate_synt PF01264.21 gi|300710982|ref|YP_003736796.1| - 7.3e-122 406.1 0.1 8.4e-122 405.9 0.1 1.0 1 0 0 1 1 1 1 Chorismate synthase DICT PF10069.9 gi|300710984|ref|YP_003736798.1| - 2.1e-08 34.0 0.0 3e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Sensory domain in DIguanylate Cyclases and Two-component system HTH_53 PF18606.1 gi|300710984|ref|YP_003736798.1| - 0.1 12.3 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain POR_N PF01855.19 gi|300710985|ref|YP_003736799.1| - 4e-50 170.7 0.0 7.4e-50 169.8 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|300710985|ref|YP_003736799.1| - 5.6e-47 160.1 0.0 1.2e-46 159.0 0.0 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|300710985|ref|YP_003736799.1| - 3.7e-09 36.8 0.0 7.6e-09 35.8 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|300710985|ref|YP_003736799.1| - 2.3e-06 27.3 0.0 5e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|300710985|ref|YP_003736799.1| - 0.013 15.3 0.0 0.037 13.9 0.0 1.8 1 0 0 1 1 1 0 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 gi|300710986|ref|YP_003736800.1| - 3.6e-32 111.3 0.0 5e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|300710986|ref|YP_003736800.1| - 0.065 13.4 4.1 0.057 13.6 1.9 2.2 2 1 0 2 2 2 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DUF2487 PF10673.9 gi|300710986|ref|YP_003736800.1| - 0.086 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) HTH_24 PF13412.6 gi|300710987|ref|YP_003736801.1| - 1.4e-11 43.7 0.0 2.4e-11 43.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|300710987|ref|YP_003736801.1| - 6.4e-10 38.9 0.0 9.9e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|300710987|ref|YP_003736801.1| - 1.2e-09 37.8 0.1 2.2e-09 37.0 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|300710987|ref|YP_003736801.1| - 1.8e-06 27.8 0.0 5.6e-06 26.2 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 gi|300710987|ref|YP_003736801.1| - 3.4e-06 26.7 0.0 6.3e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|300710987|ref|YP_003736801.1| - 6.1e-06 25.9 0.0 1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_29 PF13551.6 gi|300710987|ref|YP_003736801.1| - 1.6e-05 24.8 0.0 3e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix MarR PF01047.22 gi|300710987|ref|YP_003736801.1| - 3.8e-05 23.5 0.0 6.1e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|300710987|ref|YP_003736801.1| - 4.3e-05 23.4 0.0 7.2e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300710987|ref|YP_003736801.1| - 9.8e-05 22.2 0.0 0.00038 20.3 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|300710987|ref|YP_003736801.1| - 0.00016 21.7 0.0 0.00028 20.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|300710987|ref|YP_003736801.1| - 0.00028 20.6 0.0 0.00089 19.0 0.0 1.7 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|300710987|ref|YP_003736801.1| - 0.00038 20.5 0.0 0.00073 19.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300710987|ref|YP_003736801.1| - 0.00051 20.2 0.0 0.0012 19.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FaeA PF04703.12 gi|300710987|ref|YP_003736801.1| - 0.0009 19.6 0.0 0.0014 18.9 0.0 1.3 1 0 0 1 1 1 1 FaeA-like protein HTH_5 PF01022.20 gi|300710987|ref|YP_003736801.1| - 0.00093 19.0 0.0 0.0016 18.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family LacI PF00356.21 gi|300710987|ref|YP_003736801.1| - 0.0015 18.3 0.0 0.014 15.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Rrf2 PF02082.20 gi|300710987|ref|YP_003736801.1| - 0.0016 18.7 0.0 0.0031 17.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Sigma70_r4_2 PF08281.12 gi|300710987|ref|YP_003736801.1| - 0.002 17.8 0.0 0.0036 16.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|300710987|ref|YP_003736801.1| - 0.0043 17.0 0.0 0.0075 16.2 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|300710987|ref|YP_003736801.1| - 0.0053 16.6 0.0 0.0088 15.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GntR PF00392.21 gi|300710987|ref|YP_003736801.1| - 0.0054 16.3 0.1 0.015 15.0 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TetR_N PF00440.23 gi|300710987|ref|YP_003736801.1| - 0.0095 15.7 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family RPA_C PF08784.11 gi|300710987|ref|YP_003736801.1| - 0.01 16.5 0.0 0.029 15.0 0.0 1.7 2 0 0 2 2 2 0 Replication protein A C terminal Phage_NinH PF06322.11 gi|300710987|ref|YP_003736801.1| - 0.012 15.5 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Phage NinH protein HTH_Tnp_1 PF01527.20 gi|300710987|ref|YP_003736801.1| - 0.019 15.2 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 Transposase HTH_Tnp_ISL3 PF13542.6 gi|300710987|ref|YP_003736801.1| - 0.03 13.7 0.0 0.043 13.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_10 PF04967.12 gi|300710987|ref|YP_003736801.1| - 0.033 14.0 0.0 0.066 13.0 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_38 PF13936.6 gi|300710987|ref|YP_003736801.1| - 0.035 13.9 0.1 0.068 13.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_31 PF13560.6 gi|300710987|ref|YP_003736801.1| - 0.055 13.8 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MerR PF00376.23 gi|300710987|ref|YP_003736801.1| - 0.065 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Sigma70_r4 PF04545.16 gi|300710987|ref|YP_003736801.1| - 0.077 12.5 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_17 PF12728.7 gi|300710987|ref|YP_003736801.1| - 0.078 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_6 PF01418.17 gi|300710987|ref|YP_003736801.1| - 0.094 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_3 PF01381.22 gi|300710987|ref|YP_003736801.1| - 0.13 12.3 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_1 PF00126.27 gi|300710987|ref|YP_003736801.1| - 0.15 12.1 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_47 PF16221.5 gi|300710987|ref|YP_003736801.1| - 0.15 11.6 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix TnsD PF15978.5 gi|300710987|ref|YP_003736801.1| - 0.22 10.5 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Polyketide_cyc2 PF10604.9 gi|300710988|ref|YP_003736802.1| - 1.4e-06 28.6 0.5 1.6e-06 28.5 0.5 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|300710988|ref|YP_003736802.1| - 2.6e-06 27.7 0.0 3.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport EamA PF00892.20 gi|300710990|ref|YP_003736804.1| - 2.9e-30 105.2 30.9 1.8e-15 57.3 11.7 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|300710990|ref|YP_003736804.1| - 1.6 8.0 12.4 4.5 6.5 4.8 2.2 2 0 0 2 2 2 0 Triose-phosphate Transporter family AAA_33 PF13671.6 gi|300710991|ref|YP_003736805.1| - 0.15 12.2 0.0 0.26 11.4 0.0 1.4 1 1 0 1 1 1 0 AAA domain PAXNEB PF05625.11 gi|300710991|ref|YP_003736805.1| - 0.24 10.5 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 PAXNEB protein CheW PF01584.19 gi|300710993|ref|YP_003736807.1| - 3.1e-24 85.2 0.1 3.4e-24 85.0 0.1 1.0 1 0 0 1 1 1 1 CheW-like domain MCPsignal PF00015.21 gi|300710994|ref|YP_003736808.1| - 1.1e-46 158.8 56.3 3.5e-44 150.6 28.9 4.3 1 1 3 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain Syntaxin-6_N PF09177.11 gi|300710994|ref|YP_003736808.1| - 1.3e-06 28.9 19.1 0.00017 22.1 0.8 3.6 2 2 2 4 4 4 2 Syntaxin 6, N-terminal Laminin_II PF06009.12 gi|300710994|ref|YP_003736808.1| - 1.4e-06 28.4 30.1 0.00056 19.9 2.3 4.1 3 1 1 4 4 4 3 Laminin Domain II DUF948 PF06103.11 gi|300710994|ref|YP_003736808.1| - 1.5e-06 28.3 25.0 0.018 15.3 1.6 4.4 3 1 1 4 4 4 4 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 gi|300710994|ref|YP_003736808.1| - 6.5e-05 23.0 25.8 0.14 12.2 3.0 4.2 2 2 1 4 4 4 4 Protein of unknown function (DUF1664) Tropomyosin PF00261.20 gi|300710994|ref|YP_003736808.1| - 7.4e-05 22.2 26.7 8.8e-05 22.0 10.2 2.7 2 1 1 3 3 3 2 Tropomyosin Fib_alpha PF08702.10 gi|300710994|ref|YP_003736808.1| - 0.0011 19.2 16.9 0.034 14.3 0.7 3.8 1 1 3 4 4 4 3 Fibrinogen alpha/beta chain family DUF5082 PF16888.5 gi|300710994|ref|YP_003736808.1| - 0.0026 18.0 23.5 1.6 9.0 0.9 4.2 2 2 1 3 3 3 2 Domain of unknown function (DUF5082) BLOC1_2 PF10046.9 gi|300710994|ref|YP_003736808.1| - 0.0028 17.9 21.0 0.15 12.3 0.8 5.4 3 2 1 5 5 5 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 SKA2 PF16740.5 gi|300710994|ref|YP_003736808.1| - 0.01 15.6 12.0 2.8 7.8 0.1 4.1 3 1 1 4 4 4 0 Spindle and kinetochore-associated protein 2 HTH_11 PF08279.12 gi|300710994|ref|YP_003736808.1| - 0.011 15.6 0.1 0.03 14.3 0.1 1.8 1 0 0 1 1 1 0 HTH domain Flagellin_C PF00700.21 gi|300710994|ref|YP_003736808.1| - 0.013 15.8 0.9 0.013 15.8 0.9 4.4 1 1 5 6 6 6 0 Bacterial flagellin C-terminal helical region CLZ PF16526.5 gi|300710994|ref|YP_003736808.1| - 0.072 13.5 11.4 0.24 11.8 0.1 4.1 4 0 0 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SHE3 PF17078.5 gi|300710994|ref|YP_003736808.1| - 0.09 12.5 8.3 0.74 9.5 0.3 2.5 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 NPV_P10 PF05531.12 gi|300710994|ref|YP_003736808.1| - 0.097 13.1 21.5 0.29 11.6 0.2 5.5 2 2 4 6 6 6 0 Nucleopolyhedrovirus P10 protein DUF3763 PF12592.8 gi|300710994|ref|YP_003736808.1| - 0.15 12.1 2.9 0.17 12.0 1.1 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF3763) IFT57 PF10498.9 gi|300710994|ref|YP_003736808.1| - 0.2 10.6 17.2 0.01 14.8 2.4 2.8 2 1 1 3 3 3 0 Intra-flagellar transport protein 57 TMPIT PF07851.13 gi|300710994|ref|YP_003736808.1| - 0.23 10.7 13.3 0.18 11.0 2.0 2.9 2 1 0 2 2 2 0 TMPIT-like protein DUF677 PF05055.12 gi|300710994|ref|YP_003736808.1| - 0.48 9.3 23.1 1.5 7.6 6.7 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF677) YojJ PF10372.9 gi|300710994|ref|YP_003736808.1| - 0.51 10.5 5.6 1.3 9.1 0.1 3.3 4 0 0 4 4 3 0 Bacterial membrane-spanning protein N-terminus FlxA PF14282.6 gi|300710994|ref|YP_003736808.1| - 0.7 9.9 23.0 0.038 14.0 6.8 3.9 3 1 1 4 4 4 0 FlxA-like protein CorA PF01544.18 gi|300710994|ref|YP_003736808.1| - 0.72 9.1 12.7 0.79 9.0 4.1 2.6 1 1 2 3 3 3 0 CorA-like Mg2+ transporter protein Dor1 PF04124.12 gi|300710994|ref|YP_003736808.1| - 0.79 8.3 12.4 19 3.8 7.1 3.2 1 1 1 2 2 2 0 Dor1-like family Syntaxin_2 PF14523.6 gi|300710994|ref|YP_003736808.1| - 0.88 10.0 9.8 6.7 7.1 2.2 4.0 1 1 1 2 2 2 0 Syntaxin-like protein CENP-Q PF13094.6 gi|300710994|ref|YP_003736808.1| - 0.95 9.6 17.5 2.6 8.2 7.0 2.9 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Spc7 PF08317.11 gi|300710994|ref|YP_003736808.1| - 1.2 7.9 25.7 2.9 6.7 7.1 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein TMP_2 PF06791.13 gi|300710994|ref|YP_003736808.1| - 1.3 8.7 33.6 0.13 11.9 7.6 3.7 1 1 4 5 5 5 0 Prophage tail length tape measure protein FlgN PF05130.12 gi|300710994|ref|YP_003736808.1| - 1.6 9.3 17.9 1.4 9.4 2.8 3.2 1 1 2 3 3 3 0 FlgN protein Sec34 PF04136.15 gi|300710994|ref|YP_003736808.1| - 1.7 8.5 16.8 7.1 6.5 1.6 4.2 2 2 3 5 5 5 0 Sec34-like family FUSC PF04632.12 gi|300710994|ref|YP_003736808.1| - 2.3 6.6 18.1 2.3 6.7 13.1 2.2 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF4795 PF16043.5 gi|300710994|ref|YP_003736808.1| - 4.9 6.7 15.6 2.4 7.7 2.2 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF2203 PF09969.9 gi|300710994|ref|YP_003736808.1| - 5.3 7.8 24.4 0.69 10.6 3.0 4.0 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) Spectrin PF00435.21 gi|300710994|ref|YP_003736808.1| - 5.7 7.5 16.3 1.6 9.3 1.7 3.9 1 1 1 4 4 4 0 Spectrin repeat Laminin_I PF06008.14 gi|300710994|ref|YP_003736808.1| - 6.3 6.4 29.4 0.27 10.9 6.4 3.8 1 1 3 4 4 4 0 Laminin Domain I Filament PF00038.21 gi|300710994|ref|YP_003736808.1| - 6.6 6.2 24.5 1.3 8.5 1.4 3.3 2 1 1 3 3 3 0 Intermediate filament protein AIP3 PF03915.13 gi|300710994|ref|YP_003736808.1| - 6.7 5.7 21.9 4.9 6.1 6.1 2.4 1 1 1 2 2 2 0 Actin interacting protein 3 Aida_N PF08910.10 gi|300710994|ref|YP_003736808.1| - 8.4 6.9 11.3 8.7 6.8 0.9 3.3 2 2 1 3 3 3 0 Aida N-terminus DUF1515 PF07439.11 gi|300710994|ref|YP_003736808.1| - 9.5 6.3 15.2 0.19 11.7 2.9 3.1 3 1 1 4 4 4 0 Protein of unknown function (DUF1515) HisKA PF00512.25 gi|300710994|ref|YP_003736808.1| - 9.7 6.3 8.5 83 3.3 0.1 4.2 2 1 2 4 4 4 0 His Kinase A (phospho-acceptor) domain CheC PF04509.12 gi|300710995|ref|YP_003736809.1| - 0.00044 20.1 0.1 0.0012 18.7 0.1 1.7 1 0 0 1 1 1 1 CheC-like family CheX PF13690.6 gi|300710995|ref|YP_003736809.1| - 0.0014 18.8 0.0 2.7 8.2 0.0 2.7 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX DUF4685 PF15737.5 gi|300710995|ref|YP_003736809.1| - 0.055 13.9 0.5 0.1 13.0 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) Response_reg PF00072.24 gi|300710996|ref|YP_003736810.1| - 1.9e-30 105.3 0.6 2.1e-30 105.2 0.6 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Arch_flagellin PF01917.16 gi|300710998|ref|YP_003736812.1| - 1.8e-22 80.3 5.4 2.1e-22 80.1 5.4 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin CARDB PF07705.11 gi|300710998|ref|YP_003736812.1| - 0.047 14.0 0.5 0.11 12.7 0.4 1.7 1 1 0 1 1 1 0 CARDB DUF3324 PF11797.8 gi|300710998|ref|YP_003736812.1| - 0.058 13.4 0.0 0.093 12.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function C-terminal (DUF3324) Arch_flagellin PF01917.16 gi|300710999|ref|YP_003736813.1| - 9.2e-09 35.7 8.5 1.3e-08 35.3 8.5 1.2 1 0 0 1 1 1 1 Archaebacterial flagellin CARDB PF07705.11 gi|300710999|ref|YP_003736813.1| - 0.025 14.8 2.2 0.043 14.1 2.2 1.5 1 1 0 1 1 1 0 CARDB Arch_flagellin PF01917.16 gi|300711000|ref|YP_003736814.1| - 5.7e-34 117.7 23.1 1.3e-30 106.8 11.7 2.2 1 1 1 2 2 2 2 Archaebacterial flagellin ABC_tran PF00005.27 gi|300711002|ref|YP_003736816.1| - 2.6e-31 109.0 0.0 3.7e-31 108.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300711002|ref|YP_003736816.1| - 1.9e-09 37.8 1.9 6.3e-05 22.9 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300711002|ref|YP_003736816.1| - 1.5e-07 31.1 0.1 9.6e-07 28.5 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300711002|ref|YP_003736816.1| - 2.7e-05 23.8 0.2 6.3e-05 22.6 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|300711002|ref|YP_003736816.1| - 4.1e-05 24.0 0.9 0.00013 22.3 0.9 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|300711002|ref|YP_003736816.1| - 0.00012 22.7 0.0 0.00016 22.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|300711002|ref|YP_003736816.1| - 0.00015 21.6 0.0 0.033 13.9 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 gi|300711002|ref|YP_003736816.1| - 0.0025 17.5 0.1 0.016 14.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|300711002|ref|YP_003736816.1| - 0.0028 16.7 3.4 0.012 14.7 0.5 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 gi|300711002|ref|YP_003736816.1| - 0.0042 17.3 0.3 0.091 12.9 0.1 2.5 2 1 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|300711002|ref|YP_003736816.1| - 0.008 15.8 0.0 0.018 14.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain MukB PF04310.12 gi|300711002|ref|YP_003736816.1| - 0.05 13.4 0.1 0.18 11.6 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal AAA_22 PF13401.6 gi|300711002|ref|YP_003736816.1| - 0.051 13.9 0.1 0.68 10.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|300711002|ref|YP_003736816.1| - 0.068 12.4 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin MMR_HSR1 PF01926.23 gi|300711002|ref|YP_003736816.1| - 0.08 13.0 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase DAGK_cat PF00781.24 gi|300711002|ref|YP_003736816.1| - 0.081 12.5 0.2 0.19 11.4 0.2 1.7 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain RsgA_GTPase PF03193.16 gi|300711002|ref|YP_003736816.1| - 0.088 12.7 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase ABC_ATPase PF09818.9 gi|300711002|ref|YP_003736816.1| - 0.27 10.0 1.4 6.3 5.5 0.2 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class FecCD PF01032.18 gi|300711003|ref|YP_003736817.1| - 1e-88 297.4 28.8 1.9e-88 296.5 28.8 1.5 1 1 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|300711003|ref|YP_003736817.1| - 0.0014 18.1 17.6 0.0039 16.7 17.5 1.7 1 1 1 2 2 2 1 ABC 3 transport family Phage_holin_3_1 PF05106.12 gi|300711003|ref|YP_003736817.1| - 1.3 9.5 5.1 15 6.1 0.1 2.8 2 0 0 2 2 2 0 Phage holin family (Lysis protein S) Peripla_BP_2 PF01497.18 gi|300711004|ref|YP_003736818.1| - 2.5e-27 96.0 5.4 3.5e-27 95.5 5.4 1.2 1 0 0 1 1 1 1 Periplasmic binding protein PGF-CTERM PF18204.1 gi|300711004|ref|YP_003736818.1| - 6e-06 26.0 6.8 6e-06 26.0 6.8 1.9 2 0 0 2 2 2 1 PGF-CTERM motif Gram_pos_anchor PF00746.21 gi|300711004|ref|YP_003736818.1| - 0.071 13.1 0.1 0.071 13.1 0.1 2.4 2 0 0 2 2 2 0 LPXTG cell wall anchor motif SKG6 PF08693.10 gi|300711004|ref|YP_003736818.1| - 0.2 11.1 3.0 0.48 9.9 3.0 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain SRP19 PF01922.17 gi|300711005|ref|YP_003736819.1| - 2.2e-23 83.0 0.0 2.5e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein Gar1 PF04410.14 gi|300711006|ref|YP_003736820.1| - 7.3e-10 38.8 0.0 7.6e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region SPP PF06550.11 gi|300711007|ref|YP_003736821.1| - 3.7e-90 302.2 12.7 4.3e-90 302.0 12.7 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|300711007|ref|YP_003736821.1| - 4.7e-06 26.3 4.1 0.001 18.7 1.3 2.4 2 1 0 2 2 2 2 Signal peptide peptidase Presenilin PF01080.17 gi|300711007|ref|YP_003736821.1| - 8.2 5.1 14.0 21 3.7 0.0 2.7 2 1 0 2 2 2 0 Presenilin MFS_1 PF07690.16 gi|300711008|ref|YP_003736822.1| - 5.8e-35 120.8 57.1 3.1e-26 92.1 31.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|300711008|ref|YP_003736822.1| - 0.00085 18.7 42.5 0.0034 16.7 40.9 2.3 1 1 1 2 2 2 1 Uncharacterised MFS-type transporter YbfB SpdB PF05122.13 gi|300711008|ref|YP_003736822.1| - 0.015 15.4 1.3 0.26 11.4 0.2 2.5 2 0 0 2 2 2 0 Mobile element transfer protein FAM70 PF14967.6 gi|300711008|ref|YP_003736822.1| - 0.19 11.1 2.9 0.33 10.4 2.9 1.3 1 0 0 1 1 1 0 FAM70 protein ATG22 PF11700.8 gi|300711008|ref|YP_003736822.1| - 1.2 7.7 15.3 0.032 12.9 4.3 2.5 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like OCD_Mu_crystall PF02423.15 gi|300711009|ref|YP_003736823.1| - 6.9e-64 215.8 0.5 7.7e-64 215.6 0.5 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|300711009|ref|YP_003736823.1| - 0.00018 21.6 0.0 0.00029 20.9 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|300711009|ref|YP_003736823.1| - 0.0085 16.6 0.1 0.019 15.5 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|300711009|ref|YP_003736823.1| - 0.095 13.5 0.1 0.39 11.5 0.0 2.0 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold DUF3054 PF11255.8 gi|300711011|ref|YP_003736825.1| - 7.6e-19 68.3 10.6 9.2e-19 68.0 10.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3054) DUF1616 PF07760.11 gi|300711011|ref|YP_003736825.1| - 0.29 10.5 8.9 0.034 13.6 4.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1616) Acetyltransf_1 PF00583.25 gi|300711012|ref|YP_003736826.1| - 3.2e-07 30.6 0.1 1.4e-06 28.5 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|300711012|ref|YP_003736826.1| - 0.00049 20.0 0.0 0.00066 19.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300711012|ref|YP_003736826.1| - 0.0087 16.5 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300711012|ref|YP_003736826.1| - 0.011 15.8 0.0 0.025 14.7 0.0 1.5 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|300711012|ref|YP_003736826.1| - 0.046 13.8 0.0 0.069 13.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain NUDIX PF00293.28 gi|300711013|ref|YP_003736827.1| - 2.2e-15 56.8 2.6 4.1e-15 56.0 2.6 1.4 1 1 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|300711013|ref|YP_003736827.1| - 0.07 13.1 0.1 14 5.7 0.0 2.1 2 0 0 2 2 2 0 NUDIX domain Asn_synthase PF00733.21 gi|300711014|ref|YP_003736828.1| - 6.4e-30 105.0 8.1 2.6e-17 63.5 1.0 2.1 1 1 1 2 2 2 2 Asparagine synthase tRNA_Me_trans PF03054.16 gi|300711014|ref|YP_003736828.1| - 0.026 13.3 0.1 0.034 12.9 0.1 1.2 1 0 0 1 1 1 0 tRNA methyl transferase PHP_C PF13263.6 gi|300711015|ref|YP_003736829.1| - 7.3e-20 70.5 1.3 1e-18 66.8 0.5 2.3 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|300711015|ref|YP_003736829.1| - 5e-07 30.2 0.0 6e-07 29.9 0.0 1.3 1 1 0 1 1 1 1 PHP domain BolA PF01722.18 gi|300711016|ref|YP_003736830.1| - 4.7e-20 71.6 0.0 5.2e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein XPG_I PF00867.18 gi|300711017|ref|YP_003736831.1| - 5.5e-22 77.9 0.1 8.9e-22 77.3 0.1 1.3 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|300711017|ref|YP_003736831.1| - 2.9e-12 47.0 0.0 4.8e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|300711017|ref|YP_003736831.1| - 2.1e-05 25.0 0.0 4.7e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold NPCBM_assoc PF10633.9 gi|300711018|ref|YP_003736832.1| - 2.1e-15 56.7 10.9 1.2e-05 25.4 0.1 4.8 3 1 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|300711018|ref|YP_003736832.1| - 1e-10 41.8 11.4 0.00083 19.6 0.1 4.6 2 2 2 4 4 4 3 CARDB DUF11 PF01345.18 gi|300711018|ref|YP_003736832.1| - 0.00015 22.0 14.7 0.05 13.9 0.1 5.6 3 3 0 3 3 3 2 Domain of unknown function DUF11 ASH PF15780.5 gi|300711018|ref|YP_003736832.1| - 0.00061 19.9 4.0 1.5 9.1 0.0 4.6 3 2 3 6 6 6 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PHTB1_C PF14728.6 gi|300711018|ref|YP_003736832.1| - 0.0038 16.4 0.0 3.4 6.7 0.4 2.9 3 0 0 3 3 3 1 PTHB1 C-terminus Gryzun PF07919.12 gi|300711018|ref|YP_003736832.1| - 0.018 13.9 0.6 0.018 13.9 0.6 1.6 2 0 0 2 2 2 0 Gryzun, putative trafficking through Golgi Alpha_adaptinC2 PF02883.20 gi|300711018|ref|YP_003736832.1| - 0.029 14.7 0.2 0.55 10.6 0.0 2.7 3 0 0 3 3 3 0 Adaptin C-terminal domain DUF1573 PF07610.11 gi|300711018|ref|YP_003736832.1| - 0.055 13.5 1.0 19 5.3 0.1 4.0 3 1 0 3 3 3 0 Protein of unknown function (DUF1573) LptE PF04390.12 gi|300711018|ref|YP_003736832.1| - 0.062 14.0 2.1 0.18 12.5 1.8 2.2 1 1 0 1 1 1 0 Lipopolysaccharide-assembly ACT_5 PF13710.6 gi|300711018|ref|YP_003736832.1| - 0.15 11.9 0.0 0.77 9.6 0.0 2.3 2 0 0 2 2 2 0 ACT domain MMPL PF03176.15 gi|300711019|ref|YP_003736833.1| - 9.8e-38 129.9 25.0 5.7e-19 68.2 5.6 2.8 2 1 0 2 2 2 2 MMPL family Patched PF02460.18 gi|300711019|ref|YP_003736833.1| - 2.2e-13 49.2 15.4 6.9e-07 27.8 7.3 2.6 2 1 0 2 2 2 2 Patched family Sterol-sensing PF12349.8 gi|300711019|ref|YP_003736833.1| - 5.2e-10 39.4 11.1 2.6e-06 27.4 1.4 2.3 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Glu-tRNAGln PF02686.15 gi|300711021|ref|YP_003736835.1| - 2.9e-16 59.5 6.1 2.9e-16 59.5 6.1 1.4 2 0 0 2 2 2 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.21 gi|300711022|ref|YP_003736836.1| - 1.4e-144 482.4 0.4 1.6e-144 482.2 0.4 1.0 1 0 0 1 1 1 1 Amidase SnoaL_2 PF12680.7 gi|300711023|ref|YP_003736837.1| - 1.3e-07 32.2 0.7 1.4e-07 32.0 0.7 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|300711023|ref|YP_003736837.1| - 0.0031 17.8 0.2 0.0041 17.4 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|300711023|ref|YP_003736837.1| - 0.027 14.9 0.1 0.032 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) SnoaL PF07366.12 gi|300711023|ref|YP_003736837.1| - 0.043 13.6 0.1 0.051 13.4 0.1 1.2 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase MarR PF01047.22 gi|300711024|ref|YP_003736838.1| - 4.9e-06 26.4 0.0 6.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 gi|300711024|ref|YP_003736838.1| - 0.00019 21.5 0.0 0.00027 21.0 0.0 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.7 gi|300711024|ref|YP_003736838.1| - 0.0019 18.0 0.0 0.0035 17.2 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|300711024|ref|YP_003736838.1| - 0.039 14.5 0.0 0.047 14.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Aminotran_5 PF00266.19 gi|300711025|ref|YP_003736839.1| - 1.5e-54 185.3 0.0 1.9e-54 185.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|300711025|ref|YP_003736839.1| - 0.00012 21.4 0.0 0.4 9.8 0.0 2.2 2 0 0 2 2 2 2 Aminotransferase class I and II AMP-binding PF00501.28 gi|300711026|ref|YP_003736840.1| - 1.2e-84 284.3 0.0 1.5e-84 284.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711026|ref|YP_003736840.1| - 9.2e-18 65.0 0.2 3e-17 63.4 0.1 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain DRTGG PF07085.12 gi|300711026|ref|YP_003736840.1| - 0.095 12.5 0.1 0.66 9.8 0.0 2.4 3 0 0 3 3 3 0 DRTGG domain MR_MLE_C PF13378.6 gi|300711027|ref|YP_003736841.1| - 1.2e-42 146.0 4.6 2.5e-42 144.9 4.6 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like UbiA PF01040.18 gi|300711028|ref|YP_003736842.1| - 2.2e-38 132.0 19.7 2.2e-38 132.0 19.7 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family DUF3325 PF11804.8 gi|300711029|ref|YP_003736843.1| - 0.014 15.5 5.1 0.016 15.3 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) DUF997 PF06196.12 gi|300711029|ref|YP_003736843.1| - 0.033 14.2 1.2 0.04 13.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF997) Metal_resist PF13801.6 gi|300711029|ref|YP_003736843.1| - 0.18 12.0 3.2 0.13 12.4 2.1 1.4 1 1 1 2 2 2 0 Heavy-metal resistance Phage_holin_3_6 PF07332.11 gi|300711029|ref|YP_003736843.1| - 2 8.4 9.1 2.5 8.1 9.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III VPDSG-CTERM PF18205.1 gi|300711029|ref|YP_003736843.1| - 6.6 6.7 11.0 12 5.8 0.3 2.5 2 0 0 2 2 2 0 VPDSG-CTERM motif Pyridox_ox_2 PF12900.7 gi|300711030|ref|YP_003736844.1| - 6.9e-17 61.8 0.1 7.9e-17 61.6 0.1 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase ECH_1 PF00378.20 gi|300711031|ref|YP_003736845.1| - 1.8e-52 178.2 0.0 2.4e-51 174.5 0.0 1.9 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|300711031|ref|YP_003736845.1| - 1.7e-15 57.4 0.0 2.7e-15 56.7 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase TPP_enzyme_N PF02776.18 gi|300711032|ref|YP_003736846.1| - 1.8e-33 115.6 0.0 3.4e-33 114.7 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M_2 PF16582.5 gi|300711032|ref|YP_003736846.1| - 3.3e-10 40.0 0.0 4.7e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Middle domain of thiamine pyrophosphate TPP_enzyme_C PF02775.21 gi|300711032|ref|YP_003736846.1| - 5.6e-07 29.5 0.0 1.2e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Chorismate_bind PF00425.18 gi|300711033|ref|YP_003736847.1| - 3e-76 256.4 0.0 3.8e-76 256.1 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Memo PF01875.17 gi|300711033|ref|YP_003736847.1| - 0.22 10.6 0.1 0.35 10.0 0.1 1.2 1 0 0 1 1 1 0 Memo-like protein DUF433 PF04255.14 gi|300711033|ref|YP_003736847.1| - 0.27 11.1 2.3 29 4.6 0.0 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF433) Cdc6_C PF09079.11 gi|300711034|ref|YP_003736848.1| - 3.2e-19 68.7 0.1 6.8e-19 67.6 0.1 1.6 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|300711034|ref|YP_003736848.1| - 1.4e-13 51.3 0.0 4.4e-13 49.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|300711034|ref|YP_003736848.1| - 2.5e-10 41.0 1.0 1.2e-09 38.8 0.3 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|300711034|ref|YP_003736848.1| - 1.7e-05 25.3 0.2 5.6e-05 23.6 0.2 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|300711034|ref|YP_003736848.1| - 4.6e-05 23.2 0.0 0.00011 21.9 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 gi|300711034|ref|YP_003736848.1| - 0.0001 22.3 0.0 0.00032 20.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|300711034|ref|YP_003736848.1| - 0.00016 21.8 0.0 0.00028 21.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) NACHT PF05729.12 gi|300711034|ref|YP_003736848.1| - 0.00082 19.3 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 NACHT domain TniB PF05621.11 gi|300711034|ref|YP_003736848.1| - 0.0015 18.0 0.0 0.0045 16.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial TniB protein DUF815 PF05673.13 gi|300711034|ref|YP_003736848.1| - 0.0019 17.4 0.0 0.0031 16.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF2075 PF09848.9 gi|300711034|ref|YP_003736848.1| - 0.0088 15.3 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|300711034|ref|YP_003736848.1| - 0.011 15.3 0.0 0.018 14.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|300711034|ref|YP_003736848.1| - 0.021 14.2 0.0 0.036 13.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|300711034|ref|YP_003736848.1| - 0.024 14.3 0.0 0.04 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|300711034|ref|YP_003736848.1| - 0.048 13.8 0.0 0.14 12.3 0.0 1.9 1 1 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|300711034|ref|YP_003736848.1| - 0.051 14.0 0.0 0.092 13.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 gi|300711034|ref|YP_003736848.1| - 0.06 12.5 0.0 0.091 11.9 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain FtsK_SpoIIIE PF01580.18 gi|300711034|ref|YP_003736848.1| - 0.14 11.5 0.0 0.22 10.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family KAP_NTPase PF07693.14 gi|300711034|ref|YP_003736848.1| - 0.17 11.1 0.1 1.4 8.1 0.0 2.0 2 0 0 2 2 2 0 KAP family P-loop domain PhoH PF02562.16 gi|300711034|ref|YP_003736848.1| - 0.39 10.1 2.1 20 4.5 0.2 2.8 2 1 1 3 3 3 0 PhoH-like protein Oxidored_molyb PF00174.19 gi|300711035|ref|YP_003736849.1| - 1.9e-38 131.8 0.0 2.2e-38 131.5 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain IclR PF01614.18 gi|300711036|ref|YP_003736850.1| - 0.03 14.2 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional regulator RHH_1 PF01402.21 gi|300711036|ref|YP_003736850.1| - 0.031 14.2 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family UPF0058 PF01893.16 gi|300711037|ref|YP_003736851.1| - 3.1e-34 117.1 0.8 3.5e-34 116.9 0.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 Ada3 PF10198.9 gi|300711037|ref|YP_003736851.1| - 0.02 15.0 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 T7SS_ESX_EspC PF10824.8 gi|300711037|ref|YP_003736851.1| - 0.022 15.2 0.0 0.032 14.7 0.0 1.2 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm Pox_A_type_inc PF04508.12 gi|300711038|ref|YP_003736852.1| - 0.0041 16.9 1.4 0.012 15.4 1.4 1.8 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat Mrr_cat PF04471.12 gi|300711038|ref|YP_003736852.1| - 0.17 11.9 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 Restriction endonuclease HTH_12 PF08461.10 gi|300711039|ref|YP_003736853.1| - 0.0027 17.6 0.1 0.0049 16.8 0.1 1.6 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_24 PF13412.6 gi|300711039|ref|YP_003736853.1| - 0.013 15.0 0.4 0.021 14.4 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300711039|ref|YP_003736853.1| - 0.027 14.3 0.1 0.056 13.3 0.1 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|300711039|ref|YP_003736853.1| - 0.034 14.0 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Phage_rep_org_N PF09681.10 gi|300711039|ref|YP_003736853.1| - 0.057 13.3 0.0 0.11 12.4 0.0 1.5 1 1 1 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) DUF977 PF06163.11 gi|300711039|ref|YP_003736853.1| - 0.14 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) Adenylsucc_synt PF00709.21 gi|300711040|ref|YP_003736854.1| - 3.1e-152 507.3 0.1 3.6e-152 507.1 0.1 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Cpn10 PF00166.21 gi|300711040|ref|YP_003736854.1| - 0.093 12.8 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 Chaperonin 10 Kd subunit Molybdopterin PF00384.22 gi|300711041|ref|YP_003736855.1| - 1e-76 258.6 0.0 1.3e-76 258.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|300711041|ref|YP_003736855.1| - 2.2e-30 105.0 0.1 4.7e-30 103.9 0.1 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|300711041|ref|YP_003736855.1| - 9.1e-14 51.2 0.3 2.5e-13 49.8 0.3 1.8 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain GlcNAc_2-epim PF07221.11 gi|300711042|ref|YP_003736856.1| - 1.4e-90 304.0 7.2 1.7e-90 303.8 7.2 1.0 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) cobW PF02492.19 gi|300711043|ref|YP_003736857.1| - 1.2e-54 184.6 0.1 1.5e-54 184.3 0.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 gi|300711043|ref|YP_003736857.1| - 1.8e-24 85.5 0.0 3.3e-24 84.6 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 gi|300711043|ref|YP_003736857.1| - 6.4e-05 22.9 0.1 0.11 12.5 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase ATPase_2 PF01637.18 gi|300711043|ref|YP_003736857.1| - 0.01 15.8 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|300711043|ref|YP_003736857.1| - 0.02 14.0 0.1 0.03 13.4 0.1 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|300711043|ref|YP_003736857.1| - 0.021 15.2 0.1 0.035 14.5 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 gi|300711043|ref|YP_003736857.1| - 0.031 14.3 0.0 0.063 13.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE dNK PF01712.19 gi|300711043|ref|YP_003736857.1| - 0.041 13.7 0.1 0.061 13.2 0.1 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase MobB PF03205.14 gi|300711043|ref|YP_003736857.1| - 0.05 13.5 0.0 0.096 12.6 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B GTP_EFTU PF00009.27 gi|300711043|ref|YP_003736857.1| - 0.055 13.0 0.0 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain MeaB PF03308.16 gi|300711043|ref|YP_003736857.1| - 0.065 12.2 0.1 0.98 8.3 0.1 2.5 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|300711043|ref|YP_003736857.1| - 0.075 12.3 0.0 0.2 10.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 gi|300711043|ref|YP_003736857.1| - 0.12 12.6 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|300711043|ref|YP_003736857.1| - 0.13 12.3 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TMEM187 PF15100.6 gi|300711043|ref|YP_003736857.1| - 0.28 10.7 0.0 0.41 10.2 0.0 1.1 1 0 0 1 1 1 0 TMEM187 protein family DUF1059 PF06348.11 gi|300711045|ref|YP_003736859.1| - 0.002 18.3 0.1 0.0025 18.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) ADH_N PF08240.12 gi|300711046|ref|YP_003736860.1| - 2.3e-27 95.0 1.0 4.7e-27 94.0 0.8 1.6 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 gi|300711046|ref|YP_003736860.1| - 2.4e-11 43.3 1.1 6.1e-11 42.0 1.1 1.8 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 gi|300711046|ref|YP_003736860.1| - 1.5e-06 28.2 0.1 5.9e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|300711046|ref|YP_003736860.1| - 0.0031 17.0 0.1 0.071 12.6 0.0 2.4 3 0 0 3 3 3 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 gi|300711046|ref|YP_003736860.1| - 0.007 15.7 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 gi|300711046|ref|YP_003736860.1| - 0.15 10.8 0.4 0.91 8.2 0.2 1.9 2 0 0 2 2 2 0 HI0933-like protein NTP_transf_3 PF12804.7 gi|300711048|ref|YP_003736862.1| - 2.2e-38 132.1 0.3 2.8e-38 131.8 0.3 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|300711048|ref|YP_003736862.1| - 0.094 12.6 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Cytidylyltransferase DUF4712 PF15830.5 gi|300711048|ref|YP_003736862.1| - 0.21 11.2 0.8 1.8 8.2 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4712) Trm112p PF03966.16 gi|300711049|ref|YP_003736863.1| - 2.1e-09 37.8 1.3 5.1e-09 36.6 1.3 1.6 1 1 0 1 1 1 1 Trm112p-like protein zf-C2HE PF16278.5 gi|300711049|ref|YP_003736863.1| - 0.039 14.4 0.1 0.052 14.0 0.1 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF3040 PF11239.8 gi|300711050|ref|YP_003736864.1| - 0.0024 18.1 2.3 0.0024 18.1 2.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3040) DR2241 PF18069.1 gi|300711051|ref|YP_003736865.1| - 1.8e-43 146.9 0.3 1.8e-43 146.9 0.3 2.0 2 0 0 2 2 2 1 DR2241 stabilising domain Fer4_23 PF18009.1 gi|300711051|ref|YP_003736865.1| - 3.7e-29 101.0 0.7 7.9e-29 99.9 0.7 1.6 1 0 0 1 1 1 1 4Fe-4S iron-sulfur cluster binding domain CbiX PF01903.17 gi|300711052|ref|YP_003736866.1| - 1.1e-41 141.5 0.1 6.1e-20 71.5 0.0 2.1 2 0 0 2 2 2 2 CbiX CbiK PF06180.11 gi|300711052|ref|YP_003736866.1| - 7.6e-07 28.7 0.0 0.0021 17.4 0.0 2.1 1 1 1 2 2 2 2 Cobalt chelatase (CbiK) Response_reg PF00072.24 gi|300711053|ref|YP_003736867.1| - 7e-22 77.7 0.0 1.4e-21 76.8 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.25 gi|300711053|ref|YP_003736867.1| - 1.6e-15 57.1 0.1 3.4e-15 56.0 0.0 1.6 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|300711053|ref|YP_003736867.1| - 3.1e-14 53.1 0.0 6.3e-14 52.1 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|300711053|ref|YP_003736867.1| - 1.3e-10 41.5 0.8 3.1e-10 40.3 0.4 1.9 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|300711053|ref|YP_003736867.1| - 5e-09 36.0 0.0 2.2e-08 34.0 0.0 2.1 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 gi|300711053|ref|YP_003736867.1| - 7.5e-06 26.2 0.0 1.8e-05 25.0 0.0 1.6 2 0 0 2 2 2 1 PAS fold tRNA-synt_1e PF01406.19 gi|300711054|ref|YP_003736868.1| - 5.3e-102 341.2 0.0 1.9e-101 339.4 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DALR_2 PF09190.11 gi|300711054|ref|YP_003736868.1| - 1.3e-10 41.6 0.5 2.9e-09 37.3 0.0 2.4 2 0 0 2 2 2 1 DALR domain tRNA-synt_1g PF09334.11 gi|300711054|ref|YP_003736868.1| - 1.4e-10 40.5 0.0 4.1e-05 22.5 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|300711054|ref|YP_003736868.1| - 4.4e-10 39.0 0.0 1e-05 24.7 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|300711054|ref|YP_003736868.1| - 6.8e-07 27.9 0.0 8.2e-06 24.4 0.0 2.2 3 0 0 3 3 3 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|300711054|ref|YP_003736868.1| - 0.041 12.8 0.0 0.085 11.7 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain HTH_15 PF12324.8 gi|300711057|ref|YP_003736871.1| - 0.026 14.5 0.1 0.038 13.9 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Peptidase_M55 PF04951.13 gi|300711058|ref|YP_003736872.1| - 8.6e-49 166.3 0.0 1.5e-47 162.2 0.0 2.3 2 1 0 2 2 2 1 D-aminopeptidase MDMPI_N PF11716.8 gi|300711058|ref|YP_003736872.1| - 0.018 15.7 2.2 0.13 13.0 0.6 2.2 2 0 0 2 2 2 0 Mycothiol maleylpyruvate isomerase N-terminal domain BAT PF15915.5 gi|300711060|ref|YP_003736874.1| - 1.4e-36 125.8 7.1 1.4e-36 125.8 7.1 2.4 2 1 0 2 2 2 1 GAF and HTH_10 associated domain GAF_2 PF13185.6 gi|300711060|ref|YP_003736874.1| - 4.8e-20 72.3 0.9 9.2e-18 64.9 0.1 2.5 2 0 0 2 2 2 1 GAF domain HTH_10 PF04967.12 gi|300711060|ref|YP_003736874.1| - 2.5e-18 65.6 0.0 4.5e-18 64.8 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain PAS_4 PF08448.10 gi|300711060|ref|YP_003736874.1| - 2e-13 50.6 0.7 2e-13 50.6 0.7 2.8 2 1 0 3 3 3 1 PAS fold PAS PF00989.25 gi|300711060|ref|YP_003736874.1| - 8.3e-08 32.2 0.1 2.3e-07 30.8 0.0 1.8 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|300711060|ref|YP_003736874.1| - 1.1e-07 31.7 0.0 2.8e-07 30.4 0.0 1.7 1 0 0 1 1 1 1 PAS domain GAF PF01590.26 gi|300711060|ref|YP_003736874.1| - 3.2e-07 31.0 0.1 1.4e-06 29.0 0.0 2.1 2 0 0 2 2 2 1 GAF domain PAS_9 PF13426.7 gi|300711060|ref|YP_003736874.1| - 4.5e-05 23.7 0.0 0.00012 22.3 0.0 1.7 1 0 0 1 1 1 1 PAS domain GAF_3 PF13492.6 gi|300711060|ref|YP_003736874.1| - 0.00045 20.6 0.0 0.0012 19.2 0.0 1.8 1 0 0 1 1 1 1 GAF domain PAS_10 PF13596.6 gi|300711060|ref|YP_003736874.1| - 0.002 18.7 0.0 0.0045 17.6 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 gi|300711060|ref|YP_003736874.1| - 0.028 14.6 0.0 0.23 11.6 0.0 2.4 1 1 0 1 1 1 0 PAS fold CopD PF05425.13 gi|300711061|ref|YP_003736875.1| - 1.6e-15 57.4 12.7 1.6e-15 57.4 12.7 4.7 3 2 2 5 5 5 2 Copper resistance protein D Coiled-coil_56 PF09813.9 gi|300711061|ref|YP_003736875.1| - 0.11 12.5 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 56 Met_10 PF02475.16 gi|300711062|ref|YP_003736876.1| - 1.5e-54 184.8 0.0 1.9e-54 184.5 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|300711062|ref|YP_003736876.1| - 2.2e-12 46.7 0.0 6.2e-12 45.2 0.0 1.8 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Cons_hypoth95 PF03602.15 gi|300711062|ref|YP_003736876.1| - 1.2e-07 31.6 0.0 2.7e-07 30.4 0.0 1.6 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 gi|300711062|ref|YP_003736876.1| - 1.1e-06 29.3 0.0 3.1e-06 27.8 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|300711062|ref|YP_003736876.1| - 2.7e-06 27.0 0.0 4.2e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|300711062|ref|YP_003736876.1| - 6.5e-05 22.5 0.0 0.0001 21.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|300711062|ref|YP_003736876.1| - 8.1e-05 22.5 0.0 0.00021 21.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|300711062|ref|YP_003736876.1| - 0.00025 20.7 0.0 0.00035 20.2 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 gi|300711062|ref|YP_003736876.1| - 0.00029 20.6 0.0 0.0012 18.6 0.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltr_RsmB-F PF01189.17 gi|300711062|ref|YP_003736876.1| - 0.00098 18.8 0.0 0.0018 17.9 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_24 PF13578.6 gi|300711062|ref|YP_003736876.1| - 0.0066 17.5 0.4 0.041 14.9 0.0 2.4 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711062|ref|YP_003736876.1| - 0.015 15.9 0.0 0.044 14.4 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain TRM PF02005.16 gi|300711062|ref|YP_003736876.1| - 0.031 13.4 0.0 0.042 13.0 0.0 1.2 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase Methyltrans_SAM PF10672.9 gi|300711062|ref|YP_003736876.1| - 0.043 13.0 0.0 0.069 12.3 0.0 1.2 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Methyltransf_18 PF12847.7 gi|300711062|ref|YP_003736876.1| - 0.2 11.6 0.0 1.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain TP_methylase PF00590.20 gi|300711063|ref|YP_003736877.1| - 5.3e-25 88.6 2.2 7.1e-25 88.2 2.2 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases VanZ PF04892.12 gi|300711064|ref|YP_003736878.1| - 3.5e-08 34.1 0.4 4.5e-08 33.8 0.4 1.2 1 1 0 1 1 1 1 VanZ like family DUF2279 PF10043.9 gi|300711064|ref|YP_003736878.1| - 0.01 16.6 0.2 0.015 16.0 0.2 1.4 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2279) Kinocilin PF15033.6 gi|300711064|ref|YP_003736878.1| - 0.018 14.7 3.5 0.018 14.7 3.5 2.1 2 1 1 3 3 3 0 Kinocilin protein BacA PF02673.18 gi|300711065|ref|YP_003736879.1| - 3.2e-45 154.9 13.6 3.9e-45 154.6 13.6 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA Glyoxalase PF00903.25 gi|300711066|ref|YP_003736880.1| - 3.1e-18 66.2 1.9 7.3e-13 48.8 0.1 2.5 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300711066|ref|YP_003736880.1| - 9.4e-08 32.3 1.3 0.015 15.6 0.0 3.6 2 2 2 4 4 4 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300711066|ref|YP_003736880.1| - 0.00014 22.6 4.3 0.00096 19.9 0.1 2.6 2 1 0 2 2 2 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|300711066|ref|YP_003736880.1| - 0.00044 20.4 0.6 0.9 9.6 0.0 3.8 2 2 1 3 3 3 2 Glyoxalase-like domain PAP2 PF01569.21 gi|300711067|ref|YP_003736881.1| - 9.1e-18 64.3 6.6 9.1e-18 64.3 6.6 1.9 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|300711067|ref|YP_003736881.1| - 6e-07 29.3 11.3 6e-07 29.3 11.3 2.3 1 1 1 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 gi|300711067|ref|YP_003736881.1| - 0.00014 22.4 1.3 0.00014 22.4 1.3 2.3 2 1 1 3 3 3 1 PAP2 superfamily C-terminal YwiC PF14256.6 gi|300711067|ref|YP_003736881.1| - 6.2 7.1 21.1 6.4 7.1 0.7 3.1 2 1 1 3 3 3 0 YwiC-like protein YjcB PF15940.5 gi|300711067|ref|YP_003736881.1| - 8.2 6.7 8.9 3 8.1 2.5 3.0 2 1 1 3 3 3 0 Family of unknown function MMR_HSR1_Xtn PF16897.5 gi|300711068|ref|YP_003736882.1| - 5.5e-29 100.3 0.0 1.2e-28 99.2 0.0 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|300711068|ref|YP_003736882.1| - 3.7e-23 81.8 0.0 7.3e-23 80.8 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|300711068|ref|YP_003736882.1| - 1.2e-14 54.1 0.6 1.1e-12 47.8 0.0 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B TGS PF02824.21 gi|300711068|ref|YP_003736882.1| - 1.2e-12 47.6 0.0 2.4e-12 46.7 0.0 1.5 1 0 0 1 1 1 1 TGS domain RsgA_GTPase PF03193.16 gi|300711068|ref|YP_003736882.1| - 2.6e-07 30.7 1.1 0.029 14.3 0.1 2.8 2 1 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|300711068|ref|YP_003736882.1| - 4.5e-05 23.6 0.0 0.051 13.6 0.1 2.5 1 1 1 2 2 2 2 Dynamin family cobW PF02492.19 gi|300711068|ref|YP_003736882.1| - 0.00076 19.1 0.2 2.2 7.9 0.0 2.8 3 0 0 3 3 3 2 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 gi|300711068|ref|YP_003736882.1| - 0.00079 19.3 0.1 1.7 8.4 0.0 2.5 2 1 1 3 3 3 2 Conserved hypothetical ATP binding protein Arf PF00025.21 gi|300711068|ref|YP_003736882.1| - 0.0011 18.5 0.0 0.096 12.1 0.0 2.3 2 0 0 2 2 2 1 ADP-ribosylation factor family AIG1 PF04548.16 gi|300711068|ref|YP_003736882.1| - 0.0011 18.3 0.0 0.002 17.5 0.0 1.4 1 0 0 1 1 1 1 AIG1 family MeaB PF03308.16 gi|300711068|ref|YP_003736882.1| - 0.0012 17.9 0.2 0.018 14.1 0.0 2.4 2 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB GTP_EFTU PF00009.27 gi|300711068|ref|YP_003736882.1| - 0.024 14.2 0.1 1.2 8.6 0.0 2.7 2 1 1 3 3 3 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 gi|300711068|ref|YP_003736882.1| - 0.026 14.8 0.1 0.075 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|300711068|ref|YP_003736882.1| - 0.032 14.7 0.0 0.14 12.7 0.0 1.9 2 0 0 2 2 2 0 ABC transporter ABC_tran_CTD PF16326.5 gi|300711068|ref|YP_003736882.1| - 0.044 14.0 1.6 0.044 14.0 1.6 2.6 3 0 0 3 3 3 0 ABC transporter C-terminal domain CUE PF02845.16 gi|300711068|ref|YP_003736882.1| - 0.07 12.9 0.3 1.2 9.0 0.0 3.2 6 0 0 6 6 6 0 CUE domain MCM PF00493.23 gi|300711068|ref|YP_003736882.1| - 0.075 12.1 0.0 1 8.4 0.0 2.1 2 0 0 2 2 2 0 MCM P-loop domain POTRA PF07244.15 gi|300711068|ref|YP_003736882.1| - 0.082 13.5 0.6 0.97 10.1 0.2 2.6 1 1 1 2 2 2 0 Surface antigen variable number repeat AAA_18 PF13238.6 gi|300711068|ref|YP_003736882.1| - 0.11 13.1 0.1 0.82 10.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|300711068|ref|YP_003736882.1| - 0.11 12.8 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Ribosomal_L11 PF00298.19 gi|300711070|ref|YP_003736884.1| - 2e-20 73.1 0.0 3.2e-20 72.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 gi|300711070|ref|YP_003736884.1| - 7e-19 67.4 0.1 1.1e-18 66.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain PKD PF00801.20 gi|300711070|ref|YP_003736884.1| - 0.087 12.7 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 PKD domain PHA_gran_rgn PF09650.10 gi|300711071|ref|YP_003736885.1| - 0.075 13.3 2.2 0.9 9.9 0.2 2.2 1 1 1 2 2 2 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) K_oxygenase PF13434.6 gi|300711071|ref|YP_003736885.1| - 0.14 11.3 0.2 0.17 11.0 0.2 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Zip PF02535.22 gi|300711072|ref|YP_003736886.1| - 0.027 13.7 0.1 0.027 13.7 0.1 2.0 2 1 0 2 2 2 0 ZIP Zinc transporter DUF3995 PF13160.6 gi|300711072|ref|YP_003736886.1| - 1.2 9.5 15.0 3.2 8.1 1.6 3.7 1 1 2 4 4 4 0 Protein of unknown function (DUF3995) DUF4203 PF13886.6 gi|300711072|ref|YP_003736886.1| - 8.2 6.0 13.3 0.77 9.4 8.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4203) Ribosomal_L1 PF00687.21 gi|300711073|ref|YP_003736887.1| - 5.9e-43 147.0 0.0 7.1e-43 146.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family DUF2647 PF10839.8 gi|300711073|ref|YP_003736887.1| - 0.024 14.7 0.0 0.047 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2647) Ribosomal_L10 PF00466.20 gi|300711074|ref|YP_003736888.1| - 1.4e-22 79.7 0.0 2.2e-22 79.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|300711074|ref|YP_003736888.1| - 7.8e-16 57.8 0.0 1.3e-15 57.2 0.0 1.3 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|300711074|ref|YP_003736888.1| - 0.0028 18.2 17.1 0.0043 17.6 14.8 2.4 2 0 0 2 2 2 1 60s Acidic ribosomal protein RNA_pol_3_Rpc31 PF11705.8 gi|300711074|ref|YP_003736888.1| - 0.093 13.0 6.6 0.15 12.3 6.6 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 FYDLN_acid PF09538.10 gi|300711074|ref|YP_003736888.1| - 9.5 7.0 12.6 27 5.5 12.6 1.8 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Ribosomal_60s PF00428.19 gi|300711075|ref|YP_003736889.1| - 1.3e-16 60.9 20.1 1.7e-16 60.6 20.1 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein RRN3 PF05327.11 gi|300711075|ref|YP_003736889.1| - 0.0026 16.4 2.4 0.003 16.2 2.4 1.0 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 PAP_RNA-bind PF04926.15 gi|300711075|ref|YP_003736889.1| - 0.18 11.5 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Poly(A) polymerase predicted RNA binding domain NOA36 PF06524.12 gi|300711075|ref|YP_003736889.1| - 0.18 11.1 8.1 0.2 10.9 8.1 1.1 1 0 0 1 1 1 0 NOA36 protein RNA_pol_3_Rpc31 PF11705.8 gi|300711075|ref|YP_003736889.1| - 1.8 8.8 13.3 2.1 8.5 13.3 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Sigma70_ner PF04546.13 gi|300711075|ref|YP_003736889.1| - 3 7.7 9.2 3.7 7.4 9.2 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region DNA_pol_phi PF04931.13 gi|300711075|ref|YP_003736889.1| - 6.7 4.7 11.2 7.9 4.5 11.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi TctA PF01970.16 gi|300711076|ref|YP_003736890.1| - 1e-45 156.2 31.4 1.2e-45 156.0 31.4 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family TctA PF01970.16 gi|300711078|ref|YP_003736892.1| - 5.7e-13 48.4 9.8 6.7e-13 48.1 9.8 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family DUF4750 PF15938.5 gi|300711078|ref|YP_003736892.1| - 3.7 7.3 14.9 0.14 11.8 2.6 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4750) DUF1610 PF07754.11 gi|300711079|ref|YP_003736893.1| - 2.4e-05 24.2 11.4 9.3e-05 22.3 5.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) C1_2 PF03107.16 gi|300711079|ref|YP_003736893.1| - 0.0015 18.8 12.1 0.035 14.4 1.0 2.1 1 1 1 2 2 2 2 C1 domain zf-CHY PF05495.12 gi|300711079|ref|YP_003736893.1| - 0.0078 16.7 13.2 0.13 12.7 7.6 2.0 1 1 1 2 2 2 2 CHY zinc finger DZR PF12773.7 gi|300711079|ref|YP_003736893.1| - 0.018 15.1 14.6 0.77 9.8 14.6 2.3 1 1 0 1 1 1 0 Double zinc ribbon HscB_4_cys PF18256.1 gi|300711079|ref|YP_003736893.1| - 0.021 14.6 1.1 0.021 14.6 1.1 2.9 2 1 1 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif Rhodanese_C PF12368.8 gi|300711079|ref|YP_003736893.1| - 0.022 15.1 10.7 0.024 15.0 10.7 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal zf-Mss51 PF13824.6 gi|300711079|ref|YP_003736893.1| - 0.027 14.6 12.0 36 4.6 12.0 3.0 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_Tnp_IS91 PF14319.6 gi|300711079|ref|YP_003736893.1| - 0.034 14.2 10.8 0.056 13.5 10.8 1.3 1 1 0 1 1 1 0 Transposase zinc-binding domain zf-ribbon_3 PF13248.6 gi|300711079|ref|YP_003736893.1| - 0.055 12.9 11.9 1.6 8.2 0.1 3.8 3 1 0 3 3 3 0 zinc-ribbon domain zf-ACC PF17848.1 gi|300711079|ref|YP_003736893.1| - 0.14 12.3 12.0 0.74 9.9 0.1 3.9 3 1 1 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-UBP PF02148.19 gi|300711079|ref|YP_003736893.1| - 0.16 12.4 5.7 1.4 9.3 5.7 2.4 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein HypA PF01155.19 gi|300711079|ref|YP_003736893.1| - 0.17 11.9 12.7 0.31 11.1 1.8 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UPF0547 PF10571.9 gi|300711079|ref|YP_003736893.1| - 0.2 11.7 16.6 1.5 9.0 0.1 3.6 3 1 0 3 3 3 0 Uncharacterised protein family UPF0547 OrfB_Zn_ribbon PF07282.11 gi|300711079|ref|YP_003736893.1| - 0.21 11.5 10.7 3.9 7.5 10.7 2.2 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.12 gi|300711079|ref|YP_003736893.1| - 0.22 11.5 13.1 2.5 8.1 11.7 2.1 1 1 0 1 1 1 0 zinc-ribbons zf-MYND PF01753.18 gi|300711079|ref|YP_003736893.1| - 0.26 11.4 10.6 2.7 8.1 3.0 2.5 2 1 0 2 2 2 0 MYND finger Rubredoxin_2 PF18073.1 gi|300711079|ref|YP_003736893.1| - 0.29 10.9 13.3 2.4 8.0 3.2 4.0 3 1 0 3 3 3 0 Rubredoxin metal binding domain C1_1 PF00130.22 gi|300711079|ref|YP_003736893.1| - 0.29 11.0 11.0 46 4.0 11.0 2.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) NMDAR2_C PF10565.9 gi|300711079|ref|YP_003736893.1| - 0.33 9.8 8.5 0.35 9.7 8.5 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus NMD3 PF04981.13 gi|300711079|ref|YP_003736893.1| - 0.45 9.9 9.3 0.49 9.8 9.3 1.0 1 0 0 1 1 1 0 NMD3 family PolC_DP2 PF03833.13 gi|300711079|ref|YP_003736893.1| - 0.48 8.2 8.4 0.54 8.1 8.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-HIT PF04438.16 gi|300711079|ref|YP_003736893.1| - 0.64 9.9 16.4 4 7.4 2.8 3.4 1 1 2 3 3 3 0 HIT zinc finger zf-C2HC5 PF06221.13 gi|300711079|ref|YP_003736893.1| - 0.68 10.0 9.4 0.14 12.1 2.2 2.1 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf_UBZ PF18439.1 gi|300711079|ref|YP_003736893.1| - 0.75 9.4 16.1 2.7 7.7 0.5 3.9 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS1595 PF12760.7 gi|300711079|ref|YP_003736893.1| - 0.87 9.6 16.8 53 3.9 0.1 3.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Desulfoferrod_N PF06397.12 gi|300711079|ref|YP_003736893.1| - 1.4 8.6 9.7 7.2 6.3 1.2 3.1 2 1 1 3 3 3 0 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.15 gi|300711079|ref|YP_003736893.1| - 3.1 7.9 7.7 14 5.8 2.0 2.2 2 0 0 2 2 2 0 BED zinc finger zinc_ribbon_2 PF13240.6 gi|300711079|ref|YP_003736893.1| - 3.3 7.5 15.5 6.4 6.6 3.3 3.7 1 1 1 2 2 1 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|300711079|ref|YP_003736893.1| - 3.7 7.5 17.1 9.3 6.3 0.1 3.7 2 1 0 2 2 2 0 SprT-like zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|300711079|ref|YP_003736893.1| - 5.1 6.9 14.0 9.5 6.0 3.4 3.4 2 2 1 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2 PF00096.26 gi|300711079|ref|YP_003736893.1| - 5.2 7.7 14.0 4.4 8.0 0.4 3.9 4 0 0 4 4 4 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.10 gi|300711079|ref|YP_003736893.1| - 5.6 7.2 19.0 65 3.8 3.8 3.7 1 1 2 3 3 3 0 Zinc ribbon domain DUF2387 PF09526.10 gi|300711079|ref|YP_003736893.1| - 6.8 6.9 10.8 5.1 7.3 0.1 2.4 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) EF1_GNE PF00736.19 gi|300711080|ref|YP_003736894.1| - 2.2e-18 66.2 0.0 2.4e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain DUF3073 PF11273.8 gi|300711080|ref|YP_003736894.1| - 0.078 13.7 0.0 0.078 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) Cys_Met_Meta_PP PF01053.20 gi|300711081|ref|YP_003736895.1| - 1.5e-152 507.6 0.0 1.7e-152 507.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|300711081|ref|YP_003736895.1| - 0.0019 17.2 0.0 0.0057 15.7 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V Met_gamma_lyase PF06838.11 gi|300711081|ref|YP_003736895.1| - 0.0076 14.8 0.0 0.012 14.2 0.0 1.2 1 0 0 1 1 1 1 Methionine gamma-lyase DegT_DnrJ_EryC1 PF01041.17 gi|300711081|ref|YP_003736895.1| - 0.015 14.6 0.1 0.097 12.0 0.1 2.1 2 1 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family Ribosomal_L21e PF01157.18 gi|300711083|ref|YP_003736897.1| - 3.4e-30 103.9 0.1 3.7e-30 103.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|300711084|ref|YP_003736898.1| - 3.8e-10 40.2 0.4 4.9e-10 39.8 0.4 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 IL28A PF15177.6 gi|300711084|ref|YP_003736898.1| - 0.0068 16.3 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 Interleukin-28A CRR7 PF12095.8 gi|300711084|ref|YP_003736898.1| - 0.012 16.0 1.1 0.094 13.2 0.1 2.1 1 1 1 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 SO_alpha_A3 PF17806.1 gi|300711084|ref|YP_003736898.1| - 0.029 14.7 0.0 0.059 13.7 0.0 1.4 1 1 0 1 1 1 0 Sarcosine oxidase A3 domain DUF1128 PF06569.11 gi|300711084|ref|YP_003736898.1| - 0.037 14.0 1.0 1.8 8.6 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1128) DUF655 PF04919.12 gi|300711085|ref|YP_003736899.1| - 4e-62 209.4 0.0 4.6e-62 209.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_3 PF12836.7 gi|300711085|ref|YP_003736899.1| - 0.0057 16.9 0.0 0.0093 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif CinA_KH PF18146.1 gi|300711085|ref|YP_003736899.1| - 0.042 14.0 0.0 0.097 12.8 0.0 1.5 1 0 0 1 1 1 0 Damage-inducible protein CinA KH domain HHH_6 PF14579.6 gi|300711085|ref|YP_003736899.1| - 0.044 14.0 0.0 0.062 13.6 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH PF00633.23 gi|300711085|ref|YP_003736899.1| - 0.085 12.8 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|300711086|ref|YP_003736900.1| - 1.1e-48 165.6 0.0 1.4e-48 165.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|300711086|ref|YP_003736900.1| - 5.8e-06 26.9 0.0 1.1e-05 26.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711086|ref|YP_003736900.1| - 0.00081 20.0 0.0 0.0016 19.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|300711086|ref|YP_003736900.1| - 0.0048 16.5 0.0 0.012 15.2 0.0 1.6 2 0 0 2 2 2 1 Nodulation protein S (NodS) Glyco_hydro_4C PF11975.8 gi|300711086|ref|YP_003736900.1| - 0.022 14.8 0.0 0.029 14.4 0.0 1.2 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain Cons_hypoth95 PF03602.15 gi|300711086|ref|YP_003736900.1| - 0.032 13.9 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MTS PF05175.14 gi|300711086|ref|YP_003736900.1| - 0.076 12.5 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain RsmJ PF04378.13 gi|300711086|ref|YP_003736900.1| - 0.092 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ PCMT PF01135.19 gi|300711086|ref|YP_003736900.1| - 0.12 12.1 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MS_channel PF00924.18 gi|300711087|ref|YP_003736901.1| - 4.3e-54 183.2 0.1 1.6e-53 181.3 0.2 1.9 2 0 0 2 2 2 1 Mechanosensitive ion channel HxlR PF01638.17 gi|300711087|ref|YP_003736901.1| - 0.17 11.8 0.0 0.41 10.5 0.0 1.6 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Methyltransf_25 PF13649.6 gi|300711088|ref|YP_003736902.1| - 7.2e-07 29.8 0.0 3.9e-06 27.5 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711088|ref|YP_003736902.1| - 8.9e-07 29.5 0.1 8.8e-06 26.3 0.1 2.2 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|300711088|ref|YP_003736902.1| - 1.5e-05 24.6 0.0 0.00019 21.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|300711088|ref|YP_003736902.1| - 0.00022 21.0 0.0 0.00033 20.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300711088|ref|YP_003736902.1| - 0.00055 19.8 0.0 0.003 17.4 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|300711088|ref|YP_003736902.1| - 0.0048 16.9 0.0 0.0071 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|300711088|ref|YP_003736902.1| - 0.0053 16.2 0.2 0.0078 15.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 gi|300711088|ref|YP_003736902.1| - 0.0073 17.0 0.0 0.13 13.0 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|300711088|ref|YP_003736902.1| - 0.045 13.7 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 gi|300711088|ref|YP_003736902.1| - 0.068 12.9 0.0 0.098 12.4 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein TrkA_N PF02254.18 gi|300711088|ref|YP_003736902.1| - 0.073 13.3 0.0 0.17 12.1 0.0 1.6 2 0 0 2 2 2 0 TrkA-N domain N6_N4_Mtase PF01555.18 gi|300711088|ref|YP_003736902.1| - 0.14 11.8 0.0 0.8 9.4 0.0 1.9 2 0 0 2 2 2 0 DNA methylase Meth_synt_1 PF08267.12 gi|300711089|ref|YP_003736903.1| - 1.8e-14 54.0 0.1 8.2e-12 45.2 0.0 2.1 1 1 1 2 2 2 2 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|300711089|ref|YP_003736903.1| - 8.5e-13 48.3 0.0 2.5e-12 46.7 0.0 1.7 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain URO-D PF01208.17 gi|300711089|ref|YP_003736903.1| - 0.022 13.9 0.0 0.038 13.2 0.0 1.3 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) Meth_synt_2 PF01717.18 gi|300711090|ref|YP_003736904.1| - 1.7e-59 201.7 0.0 2.5e-59 201.2 0.0 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|300711090|ref|YP_003736904.1| - 1.6e-13 50.9 0.1 2.1e-13 50.5 0.1 1.1 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.17 gi|300711090|ref|YP_003736904.1| - 0.0019 17.4 0.0 0.0027 16.9 0.0 1.2 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) PfkB PF00294.24 gi|300711091|ref|YP_003736905.1| - 4.2e-14 52.6 0.8 3.7e-10 39.6 1.7 2.2 2 0 0 2 2 2 2 pfkB family carbohydrate kinase Aldo_ket_red PF00248.21 gi|300711092|ref|YP_003736906.1| - 7.7e-57 192.7 0.0 1.3e-54 185.4 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family NDK PF00334.19 gi|300711093|ref|YP_003736907.1| - 8e-56 187.8 0.0 9.1e-56 187.6 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|300711094|ref|YP_003736908.1| - 2.3e-20 72.6 0.0 3.1e-20 72.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L24e Cwf_Cwc_15 PF04889.12 gi|300711094|ref|YP_003736908.1| - 5 6.8 14.7 5.4 6.7 14.7 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Ribosomal_S28e PF01200.18 gi|300711095|ref|YP_003736909.1| - 8.3e-29 99.4 1.8 9.1e-29 99.2 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|300711096|ref|YP_003736910.1| - 4.5e-25 87.2 0.0 5.2e-25 87.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|300711096|ref|YP_003736910.1| - 0.00022 21.0 0.0 0.0003 20.6 0.0 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain DUF1269 PF06897.12 gi|300711096|ref|YP_003736910.1| - 0.0056 16.9 2.1 1.2 9.5 0.0 2.1 1 1 0 2 2 2 2 Protein of unknown function (DUF1269) eRF1_3 PF03465.15 gi|300711096|ref|YP_003736910.1| - 0.071 13.6 0.1 0.087 13.3 0.1 1.2 1 0 0 1 1 1 0 eRF1 domain 3 Cas9_Topo PF17894.1 gi|300711096|ref|YP_003736910.1| - 0.21 11.6 0.0 0.33 11.0 0.0 1.2 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 Helicase_RecD PF05127.14 gi|300711097|ref|YP_003736911.1| - 5.3e-48 163.2 0.0 8.3e-48 162.6 0.0 1.3 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|300711097|ref|YP_003736911.1| - 7.7e-44 149.8 0.0 4.5e-27 94.9 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|300711097|ref|YP_003736911.1| - 6.1e-23 80.6 0.0 2.4e-21 75.5 0.0 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) AAA_30 PF13604.6 gi|300711097|ref|YP_003736911.1| - 1.1e-06 28.5 3.4 1.1e-06 28.5 3.4 2.4 3 1 0 3 3 3 1 AAA domain Acetyltransf_7 PF13508.7 gi|300711097|ref|YP_003736911.1| - 0.0046 17.4 0.0 0.012 16.0 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300711097|ref|YP_003736911.1| - 0.017 15.0 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_22 PF13401.6 gi|300711097|ref|YP_003736911.1| - 0.049 13.9 0.0 0.16 12.2 0.0 1.9 1 1 0 1 1 1 0 AAA domain Acetyltransf_1 PF00583.25 gi|300711097|ref|YP_003736911.1| - 0.16 12.2 0.0 0.39 11.0 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family tRNA-synt_1c PF00749.21 gi|300711099|ref|YP_003736913.1| - 5.6e-59 199.6 0.0 7.2e-59 199.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|300711099|ref|YP_003736913.1| - 1.3e-18 67.5 0.0 3.6e-18 66.0 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain DpnD-PcfM PF14207.6 gi|300711099|ref|YP_003736913.1| - 0.098 12.6 0.2 0.31 10.9 0.2 1.8 1 0 0 1 1 1 0 DpnD/PcfM-like protein polyprenyl_synt PF00348.17 gi|300711100|ref|YP_003736914.1| - 6e-65 218.8 0.0 7.6e-65 218.5 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Lactamase_B_2 PF12706.7 gi|300711101|ref|YP_003736915.1| - 2.7e-09 36.9 2.9 3.7e-08 33.1 0.4 2.7 3 0 0 3 3 3 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300711101|ref|YP_003736915.1| - 2.3e-07 31.0 2.8 7e-07 29.4 2.8 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|300711101|ref|YP_003736915.1| - 7.8e-06 25.7 0.1 0.0013 18.6 0.0 2.7 2 0 0 2 2 2 2 Zn-dependent metallo-hydrolase RNA specificity domain AA_kinase PF00696.28 gi|300711102|ref|YP_003736916.1| - 1.4e-35 123.1 2.4 1.7e-35 122.8 2.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.26 gi|300711103|ref|YP_003736917.1| - 2e-14 53.5 1.4 4.8e-14 52.3 1.0 1.9 1 1 1 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|300711103|ref|YP_003736917.1| - 5.7e-14 52.2 3.0 1.1e-13 51.3 0.6 2.2 2 0 0 2 2 2 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|300711103|ref|YP_003736917.1| - 0.00036 20.0 0.1 0.00088 18.8 0.1 1.7 1 0 0 1 1 1 1 Galactokinase galactose-binding signature Ribosomal_S2 PF00318.20 gi|300711104|ref|YP_003736918.1| - 1.4e-24 86.5 0.5 2.4e-14 53.1 1.0 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Enolase_C PF00113.22 gi|300711105|ref|YP_003736919.1| - 2e-75 253.8 0.4 2.9e-75 253.3 0.4 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|300711105|ref|YP_003736919.1| - 1.9e-34 118.6 0.5 5.6e-34 117.1 0.5 1.8 1 1 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|300711105|ref|YP_003736919.1| - 1e-09 38.3 0.1 2.8e-09 36.9 0.1 1.7 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|300711105|ref|YP_003736919.1| - 0.00053 19.2 0.0 0.00098 18.3 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus RNA_pol_Rpb6 PF01192.22 gi|300711106|ref|YP_003736920.1| - 6.3e-11 42.0 0.0 7e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 RNA_pol_N PF01194.17 gi|300711107|ref|YP_003736921.1| - 5e-29 100.4 0.2 5.5e-29 100.3 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit HEPN_SAV2148 PF18725.1 gi|300711107|ref|YP_003736921.1| - 0.083 12.3 0.0 0.093 12.1 0.0 1.0 1 0 0 1 1 1 0 SAV2148-like HEPN mTERF PF02536.14 gi|300711107|ref|YP_003736921.1| - 0.25 10.2 0.0 0.26 10.2 0.0 1.0 1 0 0 1 1 1 0 mTERF Ribosomal_S9 PF00380.19 gi|300711108|ref|YP_003736922.1| - 7.5e-33 113.6 0.0 8.4e-33 113.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 F_bP_aldolase PF01116.20 gi|300711108|ref|YP_003736922.1| - 0.0061 16.1 0.0 0.007 15.9 0.0 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Ribosomal_L13 PF00572.18 gi|300711109|ref|YP_003736923.1| - 2.2e-09 37.6 0.1 6.9e-07 29.6 0.1 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18 PF17135.4 gi|300711110|ref|YP_003736924.1| - 1.3e-08 34.5 0.0 1.3e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|300711110|ref|YP_003736924.1| - 2.6e-07 31.4 0.5 6.4e-07 30.1 0.5 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RNA_pol_A_bac PF01000.26 gi|300711111|ref|YP_003736925.1| - 1.2e-19 70.7 0.0 1.2e-18 67.5 0.0 2.3 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|300711111|ref|YP_003736925.1| - 4.3e-15 54.9 0.0 5.7e-15 54.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Exo_endo_phos PF03372.23 gi|300711111|ref|YP_003736925.1| - 0.13 11.7 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Ribosomal_S11 PF00411.19 gi|300711112|ref|YP_003736926.1| - 9.9e-51 170.8 2.4 1.4e-50 170.3 2.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_L18p PF00861.22 gi|300711112|ref|YP_003736926.1| - 0.0039 17.6 0.1 0.0057 17.0 0.1 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Pilus_CpaD PF09476.10 gi|300711112|ref|YP_003736926.1| - 0.024 14.4 0.4 0.028 14.1 0.4 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) S4 PF01479.25 gi|300711113|ref|YP_003736927.1| - 2.5e-16 59.1 1.3 7e-16 57.7 0.1 2.1 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 gi|300711113|ref|YP_003736927.1| - 0.002 19.0 0.4 0.0028 18.5 0.2 1.4 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain DNA_pol_lambd_f PF10391.9 gi|300711113|ref|YP_003736927.1| - 0.026 14.3 0.1 0.72 9.7 0.0 2.5 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda S4_2 PF13275.6 gi|300711113|ref|YP_003736927.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 S4 domain Ribosomal_S13 PF00416.22 gi|300711114|ref|YP_003736928.1| - 6.8e-41 139.6 3.8 8.2e-41 139.4 3.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 gi|300711114|ref|YP_003736928.1| - 0.035 12.9 0.0 0.04 12.7 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Aminotran_3 PF00202.21 gi|300711115|ref|YP_003736929.1| - 3.1e-53 180.9 0.0 4.1e-53 180.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|300711115|ref|YP_003736929.1| - 0.081 12.1 0.0 0.2 10.8 0.0 1.6 1 1 0 1 1 1 0 Aminotransferase class I and II Amino_oxidase PF01593.24 gi|300711116|ref|YP_003736930.1| - 3.6e-18 66.1 0.7 1.3e-09 37.9 0.1 2.0 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|300711116|ref|YP_003736930.1| - 5e-16 58.7 0.2 1.3e-15 57.4 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300711116|ref|YP_003736930.1| - 2.6e-11 43.7 1.5 2.9e-11 43.5 0.4 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300711116|ref|YP_003736930.1| - 0.00073 18.8 0.1 0.00089 18.6 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300711116|ref|YP_003736930.1| - 0.00075 18.8 2.3 0.0011 18.3 2.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300711116|ref|YP_003736930.1| - 0.0071 15.5 4.4 0.0071 15.5 4.4 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 gi|300711116|ref|YP_003736930.1| - 0.041 13.9 0.0 0.079 12.9 0.0 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|300711116|ref|YP_003736930.1| - 0.077 13.6 1.9 0.17 12.5 1.9 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|300711116|ref|YP_003736930.1| - 0.082 12.2 0.6 0.12 11.7 0.6 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase ApbA PF02558.16 gi|300711116|ref|YP_003736930.1| - 0.18 11.4 0.1 0.96 9.1 0.1 1.9 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 gi|300711116|ref|YP_003736930.1| - 0.2 10.3 2.6 0.28 9.9 2.6 1.1 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 gi|300711116|ref|YP_003736930.1| - 0.3 10.3 1.5 0.44 9.8 1.5 1.2 1 0 0 1 1 1 0 Thi4 family HILPDA PF15220.6 gi|300711117|ref|YP_003736931.1| - 0.1 12.8 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated Radical_SAM PF04055.21 gi|300711118|ref|YP_003736932.1| - 1.1e-24 87.7 0.0 1.8e-24 87.0 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|300711118|ref|YP_003736932.1| - 4.9e-15 55.6 0.0 8.6e-15 54.8 0.0 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|300711118|ref|YP_003736932.1| - 5.7e-07 29.9 0.0 1.1e-06 29.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|300711118|ref|YP_003736932.1| - 1.7e-05 25.0 0.0 3.5e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain ParA PF10609.9 gi|300711120|ref|YP_003736934.1| - 2.1e-99 332.0 0.0 2.6e-99 331.7 0.0 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|300711120|ref|YP_003736934.1| - 8.4e-14 51.7 0.0 1.5e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain FeS_assembly_P PF01883.19 gi|300711120|ref|YP_003736934.1| - 2.2e-13 50.1 0.4 5e-13 49.0 0.4 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein AAA_31 PF13614.6 gi|300711120|ref|YP_003736934.1| - 1.9e-10 40.9 0.4 5.8e-09 36.1 0.4 2.2 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|300711120|ref|YP_003736934.1| - 3.1e-07 29.9 0.0 5.6e-07 29.1 0.0 1.5 1 0 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|300711120|ref|YP_003736934.1| - 2e-05 24.2 0.0 0.0021 17.6 0.2 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 gi|300711120|ref|YP_003736934.1| - 0.00014 21.3 0.0 0.00025 20.4 0.0 1.4 1 0 0 1 1 1 1 VirC1 protein ArsA_ATPase PF02374.15 gi|300711120|ref|YP_003736934.1| - 0.00016 21.0 2.4 0.00036 19.8 0.8 2.0 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_25 PF13481.6 gi|300711120|ref|YP_003736934.1| - 0.03 13.9 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|300711120|ref|YP_003736934.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop APS_kinase PF01583.20 gi|300711120|ref|YP_003736934.1| - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CBP_BcsQ PF06564.12 gi|300711120|ref|YP_003736934.1| - 0.16 11.4 1.3 0.42 10.0 0.4 1.9 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ FTHFS PF01268.19 gi|300711120|ref|YP_003736934.1| - 0.17 10.1 0.0 0.22 9.7 0.0 1.1 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase DUF1610 PF07754.11 gi|300711120|ref|YP_003736934.1| - 0.18 11.8 0.9 0.36 10.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) UDG PF03167.19 gi|300711122|ref|YP_003736936.1| - 2.5e-23 82.8 0.0 3e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily NqrM PF04400.13 gi|300711122|ref|YP_003736936.1| - 0.11 12.3 0.8 0.18 11.6 0.8 1.3 1 0 0 1 1 1 0 (Na+)-NQR maturation NqrM CrgA PF06781.12 gi|300711123|ref|YP_003736937.1| - 0.11 12.6 0.8 0.15 12.2 0.8 1.2 1 0 0 1 1 1 0 Cell division protein CrgA OppC_N PF12911.7 gi|300711123|ref|YP_003736937.1| - 0.88 9.6 7.4 0.68 10.0 0.7 2.1 1 1 1 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DUF3040 PF11239.8 gi|300711123|ref|YP_003736937.1| - 1.8 8.9 5.2 2.1 8.7 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF4229 PF14012.6 gi|300711124|ref|YP_003736938.1| - 0.022 14.8 1.9 0.035 14.2 1.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4229) CAP PF00188.26 gi|300711125|ref|YP_003736939.1| - 7e-18 65.7 0.0 1e-17 65.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF2064 PF09837.9 gi|300711126|ref|YP_003736940.1| - 0.0049 16.7 0.0 0.0089 15.9 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) CPBP PF02517.16 gi|300711127|ref|YP_003736941.1| - 2.9e-14 53.2 5.6 2.9e-14 53.2 5.6 2.6 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease PRK PF00485.18 gi|300711129|ref|YP_003736943.1| - 4.7e-44 150.5 0.0 6.3e-44 150.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family dNK PF01712.19 gi|300711129|ref|YP_003736943.1| - 0.00018 21.4 0.0 0.11 12.4 0.0 2.1 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_18 PF13238.6 gi|300711129|ref|YP_003736943.1| - 0.002 18.7 1.3 0.0092 16.5 1.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|300711129|ref|YP_003736943.1| - 0.017 15.4 0.0 0.032 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain T3SS_needle_reg PF09025.10 gi|300711129|ref|YP_003736943.1| - 0.02 14.9 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 YopR, type III needle-polymerisation regulator T2SSE PF00437.20 gi|300711129|ref|YP_003736943.1| - 0.022 13.9 1.6 0.22 10.5 0.1 2.2 2 1 0 2 2 2 0 Type II/IV secretion system protein MobB PF03205.14 gi|300711129|ref|YP_003736943.1| - 0.029 14.3 0.2 2.4 8.1 0.0 2.9 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 gi|300711129|ref|YP_003736943.1| - 0.039 13.7 0.0 0.077 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|300711129|ref|YP_003736943.1| - 0.05 12.9 0.0 0.1 11.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 gi|300711129|ref|YP_003736943.1| - 0.052 14.1 0.0 0.086 13.4 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.6 gi|300711129|ref|YP_003736943.1| - 0.073 13.5 2.8 5.4 7.5 0.3 2.7 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|300711129|ref|YP_003736943.1| - 0.085 13.2 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|300711129|ref|YP_003736943.1| - 0.09 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Thymidylate_kin PF02223.17 gi|300711129|ref|YP_003736943.1| - 0.11 12.2 0.2 1.8 8.2 0.0 2.1 2 0 0 2 2 2 0 Thymidylate kinase AAA_23 PF13476.6 gi|300711129|ref|YP_003736943.1| - 0.11 12.9 0.0 0.15 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain CoaE PF01121.20 gi|300711129|ref|YP_003736943.1| - 0.12 12.0 3.2 0.99 9.1 0.3 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase CBS PF00571.28 gi|300711130|ref|YP_003736944.1| - 4.3e-13 49.5 3.6 7.5e-08 32.7 2.1 2.3 2 0 0 2 2 2 2 CBS domain DUF4831 PF16115.5 gi|300711130|ref|YP_003736944.1| - 0.0074 15.4 0.0 0.0094 15.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4831) zn-ribbon_14 PF16503.5 gi|300711130|ref|YP_003736944.1| - 0.54 9.8 2.4 0.42 10.2 0.6 1.7 2 1 0 2 2 2 0 Zinc-ribbon TF_Zn_Ribbon PF08271.12 gi|300711130|ref|YP_003736944.1| - 0.69 9.5 2.8 9.7 5.8 0.1 3.0 3 0 0 3 3 3 0 TFIIB zinc-binding Acetyltransf_1 PF00583.25 gi|300711131|ref|YP_003736945.1| - 1e-18 67.7 0.2 2.4e-18 66.5 0.3 1.6 1 1 1 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|300711131|ref|YP_003736945.1| - 4.5e-12 46.0 0.0 5.8e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300711131|ref|YP_003736945.1| - 9.9e-12 45.1 0.1 1.6e-11 44.4 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300711131|ref|YP_003736945.1| - 5.6e-07 29.7 0.0 6.6e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300711131|ref|YP_003736945.1| - 8.8e-05 22.4 0.1 0.00019 21.3 0.0 1.5 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|300711131|ref|YP_003736945.1| - 0.001 19.1 0.0 0.0018 18.4 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|300711131|ref|YP_003736945.1| - 0.0045 17.1 0.0 0.0053 16.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|300711131|ref|YP_003736945.1| - 0.055 13.1 0.1 0.065 12.9 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|300711131|ref|YP_003736945.1| - 0.058 13.4 0.0 0.15 12.1 0.0 1.8 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Amidohydro_1 PF01979.20 gi|300711133|ref|YP_003736947.1| - 6.9e-65 219.6 0.2 8.4e-65 219.3 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|300711133|ref|YP_003736947.1| - 2.9e-13 50.1 1.0 2.9e-13 50.1 1.0 2.0 1 1 0 2 2 2 1 Amidohydrolase family A_deaminase PF00962.22 gi|300711133|ref|YP_003736947.1| - 0.0014 18.0 0.0 0.0024 17.2 0.0 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase PIN_10 PF18478.1 gi|300711133|ref|YP_003736947.1| - 0.006 16.8 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 PIN like domain FAD_binding_2 PF00890.24 gi|300711134|ref|YP_003736948.1| - 3.9e-118 395.2 5.8 6e-118 394.5 5.8 1.3 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|300711134|ref|YP_003736948.1| - 3.9e-40 136.8 0.5 6.1e-40 136.2 0.5 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|300711134|ref|YP_003736948.1| - 6.4e-09 35.5 1.1 0.0005 19.4 0.5 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|300711134|ref|YP_003736948.1| - 0.00016 21.3 5.2 0.0074 15.9 5.2 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300711134|ref|YP_003736948.1| - 0.00093 18.0 0.7 0.00093 18.0 0.7 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.7 gi|300711134|ref|YP_003736948.1| - 0.0011 18.5 3.3 0.0011 18.5 3.3 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|300711134|ref|YP_003736948.1| - 0.0032 16.8 1.0 0.0032 16.8 1.0 1.9 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|300711134|ref|YP_003736948.1| - 0.0044 16.2 5.6 0.0093 15.1 4.1 2.2 3 0 0 3 3 3 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|300711134|ref|YP_003736948.1| - 0.025 13.9 0.5 0.025 13.9 0.5 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|300711134|ref|YP_003736948.1| - 0.035 13.4 1.6 0.072 12.3 0.4 2.1 3 0 0 3 3 3 0 Thi4 family Pyr_redox_3 PF13738.6 gi|300711134|ref|YP_003736948.1| - 0.046 13.0 1.7 0.064 12.5 0.3 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|300711134|ref|YP_003736948.1| - 0.062 13.7 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox PF00070.27 gi|300711134|ref|YP_003736948.1| - 0.08 13.5 0.6 0.23 12.0 0.6 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|300711134|ref|YP_003736948.1| - 0.11 12.7 1.5 0.52 10.6 0.3 2.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Fer2_3 PF13085.6 gi|300711135|ref|YP_003736949.1| - 1.3e-33 115.2 0.0 2.6e-33 114.3 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|300711135|ref|YP_003736949.1| - 2.1e-10 40.9 3.1 2.1e-10 40.9 3.1 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300711135|ref|YP_003736949.1| - 3.3e-07 30.3 3.3 7.2e-07 29.2 3.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|300711135|ref|YP_003736949.1| - 0.0001 22.8 3.9 0.0001 22.8 3.9 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|300711135|ref|YP_003736949.1| - 0.00014 22.4 3.2 0.00014 22.4 3.2 2.3 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|300711135|ref|YP_003736949.1| - 0.0022 17.7 3.3 0.53 10.1 0.1 2.5 2 0 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_9 PF13187.6 gi|300711135|ref|YP_003736949.1| - 0.0068 16.6 9.4 0.13 12.4 9.4 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300711135|ref|YP_003736949.1| - 0.02 15.8 10.0 0.13 13.2 1.5 3.2 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|300711135|ref|YP_003736949.1| - 0.095 12.9 6.1 3 8.1 0.2 2.8 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|300711135|ref|YP_003736949.1| - 0.44 11.2 8.0 8 7.2 2.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain PGBA_C PF15437.6 gi|300711135|ref|YP_003736949.1| - 0.5 10.8 12.8 0.045 14.1 6.9 2.2 2 0 0 2 2 2 0 Plasminogen-binding protein pgbA C-terminal U1snRNP70_N PF12220.8 gi|300711135|ref|YP_003736949.1| - 0.59 10.8 7.5 1.1 9.9 3.2 2.5 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Sdh_cyt PF01127.22 gi|300711136|ref|YP_003736950.1| - 6.3e-09 35.9 6.2 8.3e-09 35.5 6.2 1.1 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdh_cyt PF01127.22 gi|300711137|ref|YP_003736951.1| - 1.6e-22 79.8 5.8 1.7e-22 79.7 5.8 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AstE_AspA PF04952.14 gi|300711138|ref|YP_003736952.1| - 4.4e-62 209.8 0.0 5.4e-62 209.5 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family RimK PF08443.11 gi|300711139|ref|YP_003736953.1| - 2e-20 73.2 0.0 3.6e-20 72.3 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|300711139|ref|YP_003736953.1| - 5.3e-07 29.8 0.0 1.1e-06 28.8 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Zn_protease PF05618.11 gi|300711139|ref|YP_003736953.1| - 1.3e-06 28.4 0.9 3.6e-05 23.7 0.1 2.3 1 1 1 2 2 2 1 Putative ATP-dependant zinc protease GSH-S_ATP PF02955.16 gi|300711139|ref|YP_003736953.1| - 1.1e-05 24.9 0.0 2.3e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain gag-asp_proteas PF13975.6 gi|300711139|ref|YP_003736953.1| - 0.0093 16.5 0.2 0.018 15.6 0.2 1.5 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease DUF5488 PF17590.2 gi|300711139|ref|YP_003736953.1| - 0.09 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5488) Asp_protease_2 PF13650.6 gi|300711139|ref|YP_003736953.1| - 0.095 13.4 0.3 0.19 12.4 0.3 1.6 1 0 0 1 1 1 0 Aspartyl protease HhH-GPD PF00730.25 gi|300711140|ref|YP_003736954.1| - 1e-12 48.4 0.0 1.3e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein DUF977 PF06163.11 gi|300711140|ref|YP_003736954.1| - 0.0099 15.8 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) HHH_5 PF14520.6 gi|300711140|ref|YP_003736954.1| - 0.029 15.0 0.1 4.2 8.1 0.0 2.6 2 1 0 2 2 2 0 Helix-hairpin-helix domain 3HCDH_N PF02737.18 gi|300711141|ref|YP_003736955.1| - 3.4e-64 216.1 0.0 5.2e-64 215.4 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|300711141|ref|YP_003736955.1| - 8.6e-57 192.3 0.0 1.2e-56 191.8 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|300711141|ref|YP_003736955.1| - 2.3e-46 156.3 0.5 7.9e-30 103.3 0.0 3.4 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|300711141|ref|YP_003736955.1| - 1e-32 113.9 0.0 4.6e-30 105.3 0.0 2.3 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|300711141|ref|YP_003736955.1| - 1.3e-05 25.4 0.5 8e-05 22.8 0.5 2.0 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|300711141|ref|YP_003736955.1| - 1.8e-05 24.8 0.0 3.7e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|300711141|ref|YP_003736955.1| - 0.0035 17.9 0.7 0.022 15.4 0.7 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DFP PF04127.15 gi|300711141|ref|YP_003736955.1| - 0.076 12.8 0.0 0.2 11.5 0.0 1.8 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein 2-Hacid_dh_C PF02826.19 gi|300711141|ref|YP_003736955.1| - 0.2 11.0 1.0 1.5 8.1 1.0 2.1 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF4777 PF16007.5 gi|300711143|ref|YP_003736957.1| - 0.012 15.8 0.0 0.022 15.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) SpoVR PF04293.13 gi|300711144|ref|YP_003736958.1| - 1.9e-89 300.3 0.4 2.2e-74 250.6 0.1 2.1 2 0 0 2 2 2 2 SpoVR like protein DUF2859 PF11072.8 gi|300711144|ref|YP_003736958.1| - 0.12 12.1 0.0 7 6.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2859) CobW_C PF07683.14 gi|300711144|ref|YP_003736958.1| - 0.13 12.2 1.0 0.45 10.5 0.1 2.2 2 0 0 2 2 2 0 Cobalamin synthesis protein cobW C-terminal domain DUF444 PF04285.12 gi|300711145|ref|YP_003736959.1| - 1.4e-125 419.7 0.0 1.6e-125 419.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) PrkA PF06798.12 gi|300711146|ref|YP_003736960.1| - 3.4e-39 135.0 0.0 5.3e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 PrkA serine protein kinase C-terminal domain AAA_PrkA PF08298.11 gi|300711146|ref|YP_003736960.1| - 6.4e-11 41.8 0.0 2.7e-08 33.1 0.0 3.2 2 1 0 2 2 2 2 PrkA AAA domain PrkA PF06798.12 gi|300711147|ref|YP_003736961.1| - 1.1e-66 225.1 6.6 1.1e-66 225.1 6.6 2.2 2 0 0 2 2 2 1 PrkA serine protein kinase C-terminal domain AAA_PrkA PF08298.11 gi|300711147|ref|YP_003736961.1| - 5.5e-66 222.9 0.0 8.4e-66 222.3 0.0 1.2 1 0 0 1 1 1 1 PrkA AAA domain AAA_5 PF07728.14 gi|300711147|ref|YP_003736961.1| - 0.27 11.2 1.3 43 4.1 0.4 3.3 3 1 0 3 3 3 0 AAA domain (dynein-related subfamily) GvpG PF05120.12 gi|300711148|ref|YP_003736962.1| - 0.13 12.3 0.5 0.17 11.9 0.5 1.2 1 0 0 1 1 1 0 Gas vesicle protein G UPF0179 PF03684.13 gi|300711149|ref|YP_003736963.1| - 2.9e-47 160.1 0.2 3.3e-47 159.9 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DDE_Tnp_1_6 PF13751.6 gi|300711149|ref|YP_003736963.1| - 0.0078 16.4 0.3 0.0078 16.4 0.3 1.8 1 1 1 2 2 2 1 Transposase DDE domain Beta_elim_lyase PF01212.21 gi|300711150|ref|YP_003736964.1| - 6.4e-71 239.0 0.0 1e-70 238.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DUF309 PF03745.14 gi|300711151|ref|YP_003736965.1| - 1.3e-14 53.6 0.0 1.9e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF309) PEPCK_ATP PF01293.20 gi|300711152|ref|YP_003736966.1| - 1.9e-62 211.5 0.0 2.5e-62 211.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase DUF63 PF01889.17 gi|300711153|ref|YP_003736967.1| - 2.7e-41 142.6 9.3 4.1e-40 138.7 9.1 2.4 2 1 0 2 2 2 1 Membrane protein of unknown function DUF63 DUF4271 PF14093.6 gi|300711153|ref|YP_003736967.1| - 1.3 8.9 10.7 1.8 8.4 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4271) YcaO PF02624.16 gi|300711154|ref|YP_003736968.1| - 6.4e-50 170.3 5.1 8.9e-50 169.8 5.1 1.2 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding SHMT PF00464.19 gi|300711157|ref|YP_003736971.1| - 9.7e-155 515.1 0.1 1.2e-154 514.8 0.1 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|300711157|ref|YP_003736971.1| - 4.3e-08 32.7 0.0 1e-07 31.5 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|300711157|ref|YP_003736971.1| - 4.4e-05 22.9 0.0 0.0016 17.8 0.0 2.1 1 1 0 1 1 1 1 Beta-eliminating lyase LDcluster4 PF18306.1 gi|300711157|ref|YP_003736971.1| - 0.033 13.8 0.0 0.076 12.6 0.0 1.5 1 0 0 1 1 1 0 SLOG cluster4 family DUF348 PF03990.14 gi|300711157|ref|YP_003736971.1| - 0.07 12.9 0.5 0.91 9.3 0.0 2.9 3 0 0 3 3 3 0 G5-linked-Ubiquitin-like domain DUF5519 PF17648.1 gi|300711158|ref|YP_003736972.1| - 6.9e-33 113.0 0.0 8.4e-33 112.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5519) RNase_II_C_S1 PF18614.1 gi|300711159|ref|YP_003736973.1| - 0.039 13.9 0.1 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 RNase II-type exonuclease C-terminal S1 domain Na_H_antiporter PF03553.14 gi|300711160|ref|YP_003736974.1| - 1.8e-32 112.8 43.2 2.1e-19 69.9 15.0 2.1 1 1 1 2 2 2 2 Na+/H+ antiporter family ADH_zinc_N_2 PF13602.6 gi|300711161|ref|YP_003736975.1| - 4.9e-25 89.1 0.1 8.2e-25 88.4 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 gi|300711161|ref|YP_003736975.1| - 2e-24 86.0 0.1 3.2e-24 85.4 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|300711161|ref|YP_003736975.1| - 3.4e-09 36.6 1.4 1.8e-08 34.2 0.0 2.4 2 1 1 3 3 3 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 gi|300711161|ref|YP_003736975.1| - 0.00076 19.0 0.5 0.0014 18.1 0.5 1.4 1 0 0 1 1 1 1 short chain dehydrogenase ADH_N_2 PF16884.5 gi|300711161|ref|YP_003736975.1| - 0.011 15.7 0.0 0.047 13.6 0.0 2.1 2 0 0 2 2 2 0 N-terminal domain of oxidoreductase Polysacc_synt_C PF14667.6 gi|300711162|ref|YP_003736976.1| - 0.07 13.2 1.0 0.26 11.4 0.2 2.1 1 1 1 2 2 2 0 Polysaccharide biosynthesis C-terminal domain SpoVAB PF13782.6 gi|300711162|ref|YP_003736976.1| - 0.084 13.2 0.4 0.6 10.4 0.0 2.1 2 0 0 2 2 2 0 Stage V sporulation protein AB THF_DHG_CYH_C PF02882.19 gi|300711163|ref|YP_003736977.1| - 1.1e-66 223.0 0.5 1.6e-66 222.6 0.5 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|300711163|ref|YP_003736977.1| - 4.6e-36 123.6 0.0 6.9e-36 123.0 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HypA PF01155.19 gi|300711164|ref|YP_003736978.1| - 0.0065 16.5 0.7 0.013 15.5 0.7 1.5 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|300711164|ref|YP_003736978.1| - 0.012 15.6 0.6 0.022 14.8 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|300711164|ref|YP_003736978.1| - 0.034 14.3 0.8 0.08 13.1 0.8 1.6 1 0 0 1 1 1 0 Zinc ribbon domain DUF1451 PF07295.11 gi|300711164|ref|YP_003736978.1| - 0.13 12.2 0.3 0.3 11.1 0.3 1.6 1 0 0 1 1 1 0 Zinc-ribbon containing domain FdhE PF04216.12 gi|300711164|ref|YP_003736978.1| - 0.15 12.0 0.6 0.76 9.6 0.1 2.0 2 0 0 2 2 2 0 Protein involved in formate dehydrogenase formation TF_Zn_Ribbon PF08271.12 gi|300711164|ref|YP_003736978.1| - 0.3 10.6 5.6 1.1 8.8 5.0 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|300711164|ref|YP_003736978.1| - 1.2 8.7 3.9 11 5.6 3.9 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-tcix PF14952.6 gi|300711164|ref|YP_003736978.1| - 3.6 7.3 4.9 6.6 6.4 0.8 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding PadR PF03551.14 gi|300711166|ref|YP_003736980.1| - 3.5e-18 65.3 2.6 4.1e-18 65.1 2.6 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF1495 PF07381.11 gi|300711166|ref|YP_003736980.1| - 0.0015 18.3 0.0 0.0023 17.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_45 PF14947.6 gi|300711166|ref|YP_003736980.1| - 0.0074 16.3 0.0 0.0095 15.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|300711166|ref|YP_003736980.1| - 0.054 14.0 0.2 0.063 13.8 0.2 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|300711166|ref|YP_003736980.1| - 0.056 13.3 0.1 2.1 8.3 0.1 2.3 2 0 0 2 2 2 0 MarR family HTH_34 PF13601.6 gi|300711166|ref|YP_003736980.1| - 0.068 13.4 0.0 0.076 13.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|300711166|ref|YP_003736980.1| - 0.078 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF4010 PF13194.6 gi|300711167|ref|YP_003736981.1| - 2.3e-50 171.2 30.3 2.3e-50 171.2 30.3 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|300711167|ref|YP_003736981.1| - 6.8e-23 81.3 12.8 6.8e-23 81.3 12.8 4.3 2 1 2 4 4 4 1 MgtC family Aminotran_3 PF00202.21 gi|300711168|ref|YP_003736982.1| - 1.4e-76 257.8 0.0 1.5e-75 254.4 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-III RHH_1 PF01402.21 gi|300711169|ref|YP_003736983.1| - 0.067 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family adh_short PF00106.25 gi|300711170|ref|YP_003736984.1| - 8.7e-62 208.1 0.7 1.1e-61 207.7 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300711170|ref|YP_003736984.1| - 5.7e-50 170.1 0.9 6.7e-50 169.8 0.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|300711170|ref|YP_003736984.1| - 5.1e-16 59.1 1.4 6.9e-16 58.7 1.4 1.1 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|300711170|ref|YP_003736984.1| - 6.1e-05 23.0 1.4 8.4e-05 22.5 1.4 1.2 1 0 0 1 1 1 1 NAD(P)H-binding HEM4 PF02602.15 gi|300711170|ref|YP_003736984.1| - 0.002 17.5 0.2 0.011 15.1 0.2 2.0 2 0 0 2 2 2 1 Uroporphyrinogen-III synthase HemD Epimerase PF01370.21 gi|300711170|ref|YP_003736984.1| - 0.0026 17.2 0.1 0.004 16.6 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family gerPA PF10676.9 gi|300711170|ref|YP_003736984.1| - 0.0088 16.3 0.1 0.019 15.2 0.1 1.5 1 0 0 1 1 1 1 Spore germination protein gerPA/gerPF HrpJ PF07201.11 gi|300711170|ref|YP_003736984.1| - 0.077 13.3 0.4 0.52 10.6 0.0 2.1 2 0 0 2 2 2 0 HrpJ-like domain ApbA PF02558.16 gi|300711170|ref|YP_003736984.1| - 0.097 12.3 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NIBRIN_BRCT_II PF16508.5 gi|300711170|ref|YP_003736984.1| - 0.12 12.7 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Second BRCT domain on Nijmegen syndrome breakage protein GDP_Man_Dehyd PF16363.5 gi|300711170|ref|YP_003736984.1| - 0.14 11.5 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase AI-2E_transport PF01594.16 gi|300711171|ref|YP_003736985.1| - 4.9e-37 127.8 38.5 3.4e-36 125.0 38.5 1.8 1 1 0 1 1 1 1 AI-2E family transporter HhH-GPD PF00730.25 gi|300711172|ref|YP_003736986.1| - 1.6e-15 57.4 0.0 2.4e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|300711172|ref|YP_003736986.1| - 1.4e-06 27.9 0.0 3e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|300711172|ref|YP_003736986.1| - 0.15 12.5 0.0 2.4 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain FMN_red PF03358.15 gi|300711173|ref|YP_003736987.1| - 5.3e-33 114.0 0.0 6.9e-33 113.6 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|300711173|ref|YP_003736987.1| - 2.8e-09 37.0 0.0 3.9e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|300711173|ref|YP_003736987.1| - 0.087 13.1 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain TK PF00265.18 gi|300711174|ref|YP_003736988.1| - 1.5e-46 158.5 0.0 1.7e-46 158.3 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase zf-dskA_traR PF01258.17 gi|300711174|ref|YP_003736988.1| - 0.072 13.0 2.8 2.6 8.1 0.1 3.2 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger Yip1 PF04893.17 gi|300711175|ref|YP_003736989.1| - 3.1e-08 33.5 16.6 4.1e-08 33.1 16.6 1.1 1 0 0 1 1 1 1 Yip1 domain tRNA_anti-codon PF01336.25 gi|300711176|ref|YP_003736990.1| - 7.8e-13 48.2 0.6 2.2e-12 46.8 0.2 2.0 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|300711176|ref|YP_003736990.1| - 5.4e-10 39.5 0.0 2.2e-09 37.5 0.0 2.2 1 0 0 1 1 1 1 S1 RNA binding domain S1_2 PF13509.6 gi|300711176|ref|YP_003736990.1| - 0.017 15.2 0.0 0.04 14.0 0.0 1.7 1 0 0 1 1 1 0 S1 domain tRNA_anti_2 PF13742.6 gi|300711176|ref|YP_003736990.1| - 0.042 14.1 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Trypan_PARP PF05887.11 gi|300711176|ref|YP_003736990.1| - 0.14 12.1 22.4 0.4 10.7 22.4 1.8 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) SPESP1 PF15754.5 gi|300711176|ref|YP_003736990.1| - 2 7.5 8.4 3.2 6.8 8.4 1.2 1 0 0 1 1 1 0 Sperm equatorial segment protein 1 Radical_SAM_C PF16199.5 gi|300711177|ref|YP_003736991.1| - 1.8e-25 88.7 0.1 3.1e-25 88.0 0.1 1.4 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|300711177|ref|YP_003736991.1| - 1e-23 84.6 0.0 2.5e-23 83.3 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|300711177|ref|YP_003736991.1| - 8e-09 35.8 0.1 2e-08 34.5 0.1 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|300711177|ref|YP_003736991.1| - 1.5e-05 24.9 0.1 3.5e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300711177|ref|YP_003736991.1| - 0.035 14.5 0.0 0.066 13.7 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF4013 PF13197.6 gi|300711178|ref|YP_003736992.1| - 7.1e-36 123.6 16.1 7.1e-36 123.6 16.1 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF4013) DUF2644 PF10841.8 gi|300711178|ref|YP_003736992.1| - 0.14 12.4 0.1 0.14 12.4 0.1 2.9 4 0 0 4 4 4 0 Protein of unknown function (DUF2644) DUF1508 PF07411.12 gi|300711179|ref|YP_003736993.1| - 4.8e-21 74.4 0.2 7.8e-21 73.7 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1508) SHOCT PF09851.9 gi|300711180|ref|YP_003736994.1| - 5.8e-08 32.2 3.1 1.3e-07 31.1 3.1 1.7 1 0 0 1 1 1 1 Short C-terminal domain DUF1707 PF08044.11 gi|300711180|ref|YP_003736994.1| - 0.011 15.8 1.3 0.011 15.8 1.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1707) GvpG PF05120.12 gi|300711180|ref|YP_003736994.1| - 0.047 13.7 1.1 0.071 13.1 1.1 1.2 1 0 0 1 1 1 0 Gas vesicle protein G DUF3040 PF11239.8 gi|300711180|ref|YP_003736994.1| - 0.091 13.0 1.8 0.2 12.0 1.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) CD24 PF14984.6 gi|300711180|ref|YP_003736994.1| - 1.4 9.2 2.9 2.1 8.6 0.2 2.1 2 0 0 2 2 2 0 CD24 protein FbpA PF05833.11 gi|300711181|ref|YP_003736995.1| - 7.6e-90 301.8 0.0 9.7e-90 301.5 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|300711181|ref|YP_003736995.1| - 6.2e-23 81.5 0.0 1.1e-22 80.8 0.0 1.4 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|300711181|ref|YP_003736995.1| - 3.8e-05 23.8 0.0 0.00012 22.2 0.0 1.9 1 0 0 1 1 1 1 NFACT protein RNA binding domain Ribosomal_S13 PF00416.22 gi|300711181|ref|YP_003736995.1| - 0.021 15.2 1.5 0.044 14.2 0.0 2.3 3 0 0 3 3 3 0 Ribosomal protein S13/S18 DUF4013 PF13197.6 gi|300711182|ref|YP_003736996.1| - 6.3e-32 110.7 13.6 6.3e-32 110.7 13.6 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) Caveolin PF01146.17 gi|300711182|ref|YP_003736996.1| - 9.8 6.1 7.4 0.34 10.9 1.2 1.8 2 0 0 2 2 2 0 Caveolin DUF4013 PF13197.6 gi|300711183|ref|YP_003736997.1| - 7.9e-14 51.8 16.1 1.1e-13 51.4 16.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) VSP PF03302.13 gi|300711183|ref|YP_003736997.1| - 0.9 8.3 5.0 1.5 7.5 5.0 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein eRF1_1 PF03463.15 gi|300711184|ref|YP_003736998.1| - 4.4e-28 97.8 0.6 7.7e-28 97.1 0.6 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|300711184|ref|YP_003736998.1| - 9e-23 80.9 0.1 9e-23 80.9 0.1 2.5 3 0 0 3 3 3 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|300711184|ref|YP_003736998.1| - 5.8e-10 39.6 0.1 5.5e-09 36.4 0.1 2.2 1 1 0 1 1 1 1 eRF1 domain 2 ADSL_C PF10397.9 gi|300711184|ref|YP_003736998.1| - 0.075 13.6 0.2 0.35 11.4 0.1 2.3 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminus Fer2 PF00111.27 gi|300711185|ref|YP_003736999.1| - 1.5e-11 44.1 0.6 2e-11 43.7 0.6 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Lactamase_B_2 PF12706.7 gi|300711186|ref|YP_003737000.1| - 1.7e-12 47.3 0.1 2.3e-12 46.9 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300711186|ref|YP_003737000.1| - 5e-11 43.0 1.1 6.4e-11 42.6 1.1 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|300711186|ref|YP_003737000.1| - 0.04 13.8 0.0 0.063 13.2 0.0 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain DEAD_assoc PF08494.11 gi|300711187|ref|YP_003737001.1| - 1.8e-48 164.9 0.1 3.9e-48 163.8 0.1 1.6 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|300711187|ref|YP_003737001.1| - 1e-30 106.8 0.0 1.2e-29 103.4 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|300711187|ref|YP_003737001.1| - 2.3e-19 69.8 0.0 7e-18 65.0 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|300711187|ref|YP_003737001.1| - 2.2e-07 31.0 0.0 5.6e-07 29.7 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|300711187|ref|YP_003737001.1| - 0.0052 17.1 0.0 0.029 14.6 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|300711187|ref|YP_003737001.1| - 0.033 14.5 0.0 0.089 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_12 PF13087.6 gi|300711188|ref|YP_003737002.1| - 2.2e-41 141.7 0.0 3.2e-41 141.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|300711188|ref|YP_003737002.1| - 9.1e-40 137.1 0.1 4.6e-21 75.8 0.1 2.3 1 1 1 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|300711188|ref|YP_003737002.1| - 9.1e-18 64.7 0.4 3.2e-17 62.9 0.4 2.0 1 1 0 1 1 1 1 AAA domain Dna2 PF08696.11 gi|300711188|ref|YP_003737002.1| - 9.2e-18 64.8 0.0 4e-16 59.4 0.0 2.2 1 1 0 1 1 1 1 DNA replication factor Dna2 AAA_19 PF13245.6 gi|300711188|ref|YP_003737002.1| - 8e-16 58.7 0.0 4.1e-15 56.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain PDDEXK_1 PF12705.7 gi|300711188|ref|YP_003737002.1| - 1.3e-12 48.2 0.0 2.9e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Viral_helicase1 PF01443.18 gi|300711188|ref|YP_003737002.1| - 3.9e-09 36.6 0.0 0.034 13.9 0.0 3.2 3 0 0 3 3 3 3 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.21 gi|300711188|ref|YP_003737002.1| - 9e-05 22.1 0.0 0.00025 20.7 0.0 1.7 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain ResIII PF04851.15 gi|300711188|ref|YP_003737002.1| - 0.00018 21.5 0.0 0.00033 20.7 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_RecD PF05127.14 gi|300711188|ref|YP_003737002.1| - 0.00029 20.7 0.4 0.0031 17.4 0.1 2.5 2 1 0 2 2 2 1 Helicase UvrD_C_2 PF13538.6 gi|300711188|ref|YP_003737002.1| - 0.00064 19.5 0.0 0.0013 18.5 0.0 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 gi|300711188|ref|YP_003737002.1| - 0.0015 18.8 0.2 0.0069 16.7 0.1 2.3 2 1 0 2 2 1 1 AAA domain PhoH PF02562.16 gi|300711188|ref|YP_003737002.1| - 0.0016 17.9 0.0 0.0079 15.7 0.0 2.0 2 0 0 2 2 2 1 PhoH-like protein AAA_16 PF13191.6 gi|300711188|ref|YP_003737002.1| - 0.0054 17.1 0.5 0.026 14.9 0.2 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|300711188|ref|YP_003737002.1| - 0.016 15.6 0.0 0.035 14.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|300711188|ref|YP_003737002.1| - 0.021 14.4 0.0 0.055 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|300711188|ref|YP_003737002.1| - 0.024 13.9 0.0 0.073 12.3 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 gi|300711188|ref|YP_003737002.1| - 0.051 12.6 0.0 0.09 11.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein PIF1 PF05970.14 gi|300711188|ref|YP_003737002.1| - 0.068 12.3 0.0 2.7 7.1 0.0 2.1 2 0 0 2 2 2 0 PIF1-like helicase Mg_chelatase PF01078.21 gi|300711188|ref|YP_003737002.1| - 0.071 12.5 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|300711188|ref|YP_003737002.1| - 0.16 11.7 0.0 0.35 10.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|300711188|ref|YP_003737002.1| - 0.19 11.2 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region NUDIX PF00293.28 gi|300711189|ref|YP_003737003.1| - 3.8e-13 49.6 0.1 4.3e-13 49.4 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain HHH_2 PF12826.7 gi|300711190|ref|YP_003737004.1| - 0.00049 20.1 0.2 0.047 13.8 0.2 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|300711190|ref|YP_003737004.1| - 0.14 12.8 0.1 16 6.2 0.1 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix domain SnoaL_3 PF13474.6 gi|300711191|ref|YP_003737005.1| - 1.2e-15 57.8 0.9 1.4e-15 57.6 0.9 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_2 PF12680.7 gi|300711191|ref|YP_003737005.1| - 0.00039 21.0 4.0 0.00055 20.5 4.0 1.3 1 0 0 1 1 1 1 SnoaL-like domain DUF3225 PF11533.8 gi|300711191|ref|YP_003737005.1| - 0.0008 19.1 1.7 0.0012 18.5 1.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3225) SnoaL_4 PF13577.6 gi|300711191|ref|YP_003737005.1| - 0.0013 18.9 4.4 0.0015 18.7 4.4 1.0 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|300711191|ref|YP_003737005.1| - 0.0026 18.1 4.3 0.0033 17.8 4.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) CaMKII_AD PF08332.10 gi|300711191|ref|YP_003737005.1| - 0.0028 17.8 0.4 0.0028 17.8 0.4 1.3 1 1 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II association domain Disaggr_repeat PF06848.11 gi|300711191|ref|YP_003737005.1| - 0.058 13.1 0.9 0.073 12.8 0.9 1.1 1 0 0 1 1 1 0 Disaggregatase related repeat DUF3040 PF11239.8 gi|300711192|ref|YP_003737006.1| - 0.17 12.2 4.8 0.19 12.0 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF485 PF04341.12 gi|300711192|ref|YP_003737006.1| - 0.29 11.1 2.5 0.34 10.9 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Zincin_2 PF10103.9 gi|300711193|ref|YP_003737007.1| - 1.2e-63 215.4 3.0 2e-31 109.5 0.4 2.0 1 1 1 2 2 2 2 Zincin-like metallopeptidase Peptidase_M42 PF05343.14 gi|300711195|ref|YP_003737009.1| - 1.5e-75 253.9 0.9 1.8e-75 253.7 0.9 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|300711195|ref|YP_003737009.1| - 1e-09 38.4 0.6 2.6e-09 37.1 0.3 1.8 2 1 0 2 2 2 1 Peptidase family M20/M25/M40 Peptidase_M18 PF02127.15 gi|300711195|ref|YP_003737009.1| - 7.1e-07 28.4 0.0 0.00024 20.0 0.0 2.1 2 0 0 2 2 2 2 Aminopeptidase I zinc metalloprotease (M18) DUF1611 PF07755.11 gi|300711195|ref|YP_003737009.1| - 0.043 13.1 0.3 0.078 12.3 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain LSM PF01423.22 gi|300711196|ref|YP_003737010.1| - 2e-15 56.2 1.1 2.6e-13 49.5 1.1 2.0 1 1 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|300711196|ref|YP_003737010.1| - 1.3e-05 25.3 0.2 7.7e-05 22.8 0.1 1.8 1 1 1 2 2 2 1 Ataxin 2 SM domain DUF150_C PF17384.2 gi|300711196|ref|YP_003737010.1| - 6e-05 23.1 0.3 6.9e-05 22.9 0.3 1.0 1 0 0 1 1 1 1 RimP C-terminal SH3 domain Hfq PF17209.3 gi|300711196|ref|YP_003737010.1| - 0.0091 15.6 0.1 0.011 15.4 0.1 1.1 1 0 0 1 1 1 1 Hfq protein DUF2642 PF10842.8 gi|300711196|ref|YP_003737010.1| - 0.051 13.4 0.3 0.09 12.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2642) SH3_16 PF18348.1 gi|300711196|ref|YP_003737010.1| - 0.16 11.8 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain Ribosomal_L37e PF01907.19 gi|300711197|ref|YP_003737011.1| - 2e-19 69.5 12.3 2.2e-19 69.3 12.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.7 gi|300711197|ref|YP_003737011.1| - 0.0061 16.6 2.3 0.0072 16.3 2.3 1.1 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|300711197|ref|YP_003737011.1| - 0.0093 16.0 1.8 0.01 15.8 1.8 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ribosomal_L32p PF01783.23 gi|300711197|ref|YP_003737011.1| - 0.011 15.9 3.8 0.016 15.5 3.8 1.3 1 0 0 1 1 1 0 Ribosomal L32p protein family zf-piccolo PF05715.13 gi|300711197|ref|YP_003737011.1| - 0.014 15.6 2.5 0.032 14.4 2.5 1.6 1 1 0 1 1 1 0 Piccolo Zn-finger zinc_ribbon_2 PF13240.6 gi|300711197|ref|YP_003737011.1| - 0.59 9.9 5.7 1.7 8.5 5.6 1.8 1 1 1 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|300711197|ref|YP_003737011.1| - 0.61 10.0 4.4 2.5 8.0 0.2 2.2 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit GATase_6 PF13522.6 gi|300711198|ref|YP_003737012.1| - 9.4e-20 71.2 0.0 2.2e-19 70.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|300711198|ref|YP_003737012.1| - 2.9e-19 69.2 0.0 2.3e-18 66.3 0.0 2.2 2 0 0 2 2 2 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|300711198|ref|YP_003737012.1| - 6.6e-06 25.7 0.0 1.4e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 gi|300711198|ref|YP_003737012.1| - 0.00029 19.8 0.0 0.00088 18.3 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferases class-II DUF420 PF04238.12 gi|300711199|ref|YP_003737013.1| - 7.1e-34 116.9 3.8 7.1e-34 116.9 3.8 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF420) DUF2306 PF10067.9 gi|300711199|ref|YP_003737013.1| - 0.018 15.2 1.7 0.018 15.2 1.7 2.4 2 1 0 2 2 2 0 Predicted membrane protein (DUF2306) DUF3397 PF11877.8 gi|300711199|ref|YP_003737013.1| - 5.2 7.3 13.0 0.33 11.2 0.8 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3397) DUF4149 PF13664.6 gi|300711199|ref|YP_003737013.1| - 5.9 7.3 9.0 0.64 10.4 1.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4149) Polysacc_deac_1 PF01522.21 gi|300711200|ref|YP_003737014.1| - 7.8e-07 29.0 0.0 2.1e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide deacetylase RnfC_N PF13375.6 gi|300711200|ref|YP_003737014.1| - 0.2 11.6 0.0 0.54 10.3 0.0 1.7 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain HTH_31 PF13560.6 gi|300711201|ref|YP_003737015.1| - 1.7e-05 25.1 0.5 0.00018 21.8 0.4 2.3 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|300711201|ref|YP_003737015.1| - 5e-05 23.1 0.2 0.0001 22.1 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|300711201|ref|YP_003737015.1| - 0.00016 21.7 0.0 0.00032 20.7 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|300711201|ref|YP_003737015.1| - 0.0044 17.0 0.1 0.012 15.7 0.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix HrpJ PF07201.11 gi|300711201|ref|YP_003737015.1| - 1.9 8.8 6.1 0.21 11.9 0.7 1.8 2 0 0 2 2 2 0 HrpJ-like domain tRNA-synt_2c PF01411.19 gi|300711202|ref|YP_003737016.1| - 1.6e-12 46.7 0.0 2e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|300711202|ref|YP_003737016.1| - 3.4e-11 43.1 0.0 6.1e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 gi|300711202|ref|YP_003737016.1| - 3.5e-09 37.2 0.3 6.9e-09 36.2 0.3 1.5 1 0 0 1 1 1 1 DHHA1 domain Acyl-CoA_dh_1 PF00441.24 gi|300711203|ref|YP_003737017.1| - 4.9e-52 176.1 3.5 9.7e-52 175.2 3.5 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300711203|ref|YP_003737017.1| - 1.5e-31 109.4 0.2 5.1e-31 107.7 0.1 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|300711203|ref|YP_003737017.1| - 1.5e-25 90.0 3.5 3.9e-25 88.7 3.5 1.8 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711203|ref|YP_003737017.1| - 7.9e-24 83.7 0.0 1.9e-23 82.5 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Rdx PF10262.9 gi|300711204|ref|YP_003737018.1| - 9.6e-16 57.7 0.0 1e-15 57.7 0.0 1.0 1 0 0 1 1 1 1 Rdx family IMS PF00817.20 gi|300711205|ref|YP_003737019.1| - 7.1e-40 136.4 0.0 1.1e-39 135.8 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|300711205|ref|YP_003737019.1| - 7.8e-14 52.4 0.0 1.9e-13 51.1 0.0 1.6 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|300711205|ref|YP_003737019.1| - 3.7e-07 30.1 0.0 8.3e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|300711205|ref|YP_003737019.1| - 2.6e-05 24.7 0.0 9.5e-05 22.9 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|300711205|ref|YP_003737019.1| - 0.075 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda BAF PF02961.14 gi|300711205|ref|YP_003737019.1| - 0.16 12.4 0.0 0.51 10.8 0.0 1.7 2 0 0 2 2 2 0 Barrier to autointegration factor Sirohm_synth_M PF14824.6 gi|300711205|ref|YP_003737019.1| - 0.26 10.8 0.8 2.6 7.6 0.5 2.3 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central DUF202 PF02656.15 gi|300711206|ref|YP_003737020.1| - 0.05 14.0 10.5 0.16 12.5 10.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF835 PF05763.12 gi|300711207|ref|YP_003737021.1| - 0.064 13.0 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF835) HTH_20 PF12840.7 gi|300711207|ref|YP_003737021.1| - 0.064 13.3 0.2 0.17 12.0 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain MS_channel PF00924.18 gi|300711208|ref|YP_003737022.1| - 1.2e-48 165.4 0.6 2.4e-48 164.4 0.6 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF3043 PF11241.8 gi|300711208|ref|YP_003737022.1| - 0.051 13.6 1.1 3.7 7.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) Nramp PF01566.18 gi|300711209|ref|YP_003737023.1| - 1.3e-61 208.6 34.6 2.4e-61 207.7 34.6 1.3 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein AAA_16 PF13191.6 gi|300711210|ref|YP_003737024.1| - 0.0059 17.0 0.2 0.0081 16.6 0.2 1.4 1 1 0 1 1 1 1 AAA ATPase domain PAC2 PF09754.9 gi|300711210|ref|YP_003737024.1| - 0.023 14.7 0.0 0.029 14.4 0.0 1.3 1 1 0 1 1 1 0 PAC2 family AAA_25 PF13481.6 gi|300711210|ref|YP_003737024.1| - 0.089 12.4 0.8 0.18 11.3 0.8 1.8 1 1 0 1 1 1 0 AAA domain FAD_binding_4 PF01565.23 gi|300711211|ref|YP_003737025.1| - 2.6e-33 114.7 3.2 4.2e-33 114.0 3.2 1.4 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 gi|300711211|ref|YP_003737025.1| - 3e-14 52.8 3.2 3.8e-14 52.5 1.2 2.2 2 0 0 2 2 2 1 Berberine and berberine like Pyr_redox_2 PF07992.14 gi|300711212|ref|YP_003737026.1| - 4.4e-46 157.5 2.8 5.5e-46 157.1 2.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300711212|ref|YP_003737026.1| - 2.7e-18 66.3 3.7 2.1e-16 60.2 0.6 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Glutaredoxin PF00462.24 gi|300711212|ref|YP_003737026.1| - 3.5e-18 65.6 0.1 8e-18 64.4 0.1 1.7 1 0 0 1 1 1 1 Glutaredoxin Pyr_redox_3 PF13738.6 gi|300711212|ref|YP_003737026.1| - 4.3e-17 62.3 2.8 3.8e-15 55.9 0.2 2.7 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|300711212|ref|YP_003737026.1| - 4.4e-08 33.1 5.0 0.0082 15.8 0.0 3.4 2 1 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300711212|ref|YP_003737026.1| - 2.6e-05 23.5 3.5 0.00036 19.7 0.0 3.2 2 1 0 3 3 3 1 FAD binding domain FAD_oxidored PF12831.7 gi|300711212|ref|YP_003737026.1| - 0.00013 21.5 0.8 0.0005 19.5 0.2 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|300711212|ref|YP_003737026.1| - 0.00041 19.3 0.1 0.36 9.6 0.0 3.0 3 0 0 3 3 3 1 Tryptophan halogenase GIDA PF01134.22 gi|300711212|ref|YP_003737026.1| - 0.00044 19.5 0.6 0.58 9.2 0.1 3.6 4 0 0 4 4 4 1 Glucose inhibited division protein A NAD_binding_7 PF13241.6 gi|300711212|ref|YP_003737026.1| - 0.00059 20.2 0.2 0.0089 16.5 0.0 2.5 2 1 1 3 3 3 1 Putative NAD(P)-binding NAD_binding_8 PF13450.6 gi|300711212|ref|YP_003737026.1| - 0.00064 19.9 0.0 0.0033 17.6 0.0 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thioredoxin_3 PF13192.6 gi|300711212|ref|YP_003737026.1| - 0.00065 19.7 0.1 0.038 14.0 0.0 2.8 2 0 0 2 2 2 1 Thioredoxin domain HI0933_like PF03486.14 gi|300711212|ref|YP_003737026.1| - 0.002 16.9 1.6 0.36 9.5 0.1 3.7 5 0 0 5 5 5 1 HI0933-like protein GST_N_3 PF13417.6 gi|300711212|ref|YP_003737026.1| - 0.0025 18.2 0.0 0.0045 17.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain SH3BGR PF04908.15 gi|300711212|ref|YP_003737026.1| - 0.0083 16.3 0.0 0.016 15.3 0.0 1.4 1 0 0 1 1 1 1 SH3-binding, glutamic acid-rich protein AlaDh_PNT_C PF01262.21 gi|300711212|ref|YP_003737026.1| - 0.012 15.0 0.3 0.68 9.2 0.1 2.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain DUF836 PF05768.14 gi|300711212|ref|YP_003737026.1| - 0.015 15.7 0.0 0.037 14.4 0.0 1.7 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Amino_oxidase PF01593.24 gi|300711212|ref|YP_003737026.1| - 0.024 13.9 0.6 0.89 8.8 0.0 2.6 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|300711212|ref|YP_003737026.1| - 0.053 13.5 1.0 0.29 11.1 0.0 2.6 3 0 0 3 3 3 0 FAD-NAD(P)-binding HicB_lk_antitox PF15919.5 gi|300711212|ref|YP_003737026.1| - 0.06 13.5 0.0 0.19 11.8 0.1 1.9 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system DUF357 PF04010.13 gi|300711213|ref|YP_003737027.1| - 5.6e-33 112.9 0.1 6.5e-33 112.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) Cas_Cas1 PF01867.16 gi|300711213|ref|YP_003737027.1| - 0.15 11.2 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR associated protein Cas1 HTH_5 PF01022.20 gi|300711214|ref|YP_003737028.1| - 6.3e-11 42.0 0.0 8e-11 41.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|300711214|ref|YP_003737028.1| - 1e-07 31.9 0.0 1.5e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|300711214|ref|YP_003737028.1| - 1.8e-05 24.5 0.0 3.3e-05 23.7 0.0 1.5 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|300711214|ref|YP_003737028.1| - 3.3e-05 23.8 0.0 4.1e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|300711214|ref|YP_003737028.1| - 9.4e-05 22.2 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300711214|ref|YP_003737028.1| - 0.00031 20.5 0.0 0.00044 20.0 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|300711214|ref|YP_003737028.1| - 0.00088 18.8 0.0 0.0016 17.9 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|300711214|ref|YP_003737028.1| - 0.0038 17.5 0.0 0.005 17.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator Phage_rep_org_N PF09681.10 gi|300711214|ref|YP_003737028.1| - 0.0051 16.7 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) RP-C PF03428.13 gi|300711214|ref|YP_003737028.1| - 0.06 13.0 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain MarR PF01047.22 gi|300711214|ref|YP_003737028.1| - 0.068 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 MarR family DprA_WH PF17782.1 gi|300711214|ref|YP_003737028.1| - 0.072 13.2 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 DprA winged helix domain HTH_11 PF08279.12 gi|300711214|ref|YP_003737028.1| - 0.076 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 HTH domain FaeA PF04703.12 gi|300711214|ref|YP_003737028.1| - 0.092 13.1 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein DUF4423 PF14394.6 gi|300711214|ref|YP_003737028.1| - 0.13 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Ferritin_2 PF13668.6 gi|300711216|ref|YP_003737030.1| - 2.5e-38 131.3 0.0 3.5e-38 130.9 0.0 1.2 1 0 0 1 1 1 1 Ferritin-like domain TAT_signal PF10518.9 gi|300711216|ref|YP_003737030.1| - 0.04 13.8 7.3 0.04 13.8 7.3 2.1 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Rubrerythrin PF02915.17 gi|300711216|ref|YP_003737030.1| - 0.13 12.7 0.1 0.97 9.8 0.0 2.3 2 1 0 2 2 2 0 Rubrerythrin TFIIB PF00382.19 gi|300711217|ref|YP_003737031.1| - 6.8e-40 135.0 0.5 3.7e-19 68.5 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|300711217|ref|YP_003737031.1| - 4.8e-18 64.4 2.8 9.2e-18 63.5 2.8 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|300711217|ref|YP_003737031.1| - 0.0012 18.7 2.5 0.0024 17.7 2.5 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.16 gi|300711217|ref|YP_003737031.1| - 0.0025 17.3 3.1 0.0079 15.7 0.1 2.9 3 0 0 3 3 3 1 Sigma-70, region 4 DZR PF12773.7 gi|300711217|ref|YP_003737031.1| - 0.0095 15.9 0.7 0.016 15.2 0.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.6 gi|300711217|ref|YP_003737031.1| - 0.011 15.6 2.1 0.031 14.2 2.1 1.7 1 1 0 1 1 1 0 Nudix N-terminal Anti-TRAP PF15777.5 gi|300711217|ref|YP_003737031.1| - 0.035 14.1 1.6 0.069 13.1 1.6 1.4 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein HTH_AsnC-type PF13404.6 gi|300711217|ref|YP_003737031.1| - 0.065 13.1 0.2 0.33 10.8 0.1 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Cyclin_C PF02984.19 gi|300711217|ref|YP_003737031.1| - 0.091 12.9 0.0 1 9.4 0.0 2.2 2 0 0 2 2 2 0 Cyclin, C-terminal domain HTH_Tnp_ISL3 PF13542.6 gi|300711217|ref|YP_003737031.1| - 0.11 11.9 0.1 0.26 10.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Auto_anti-p27 PF06677.12 gi|300711217|ref|YP_003737031.1| - 0.12 12.6 1.1 0.2 11.8 1.1 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TrmB PF01978.19 gi|300711217|ref|YP_003737031.1| - 0.15 12.0 0.3 0.44 10.5 0.3 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB zf-RING_7 PF02591.15 gi|300711217|ref|YP_003737031.1| - 0.2 11.9 1.1 17 5.7 0.2 2.9 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300711217|ref|YP_003737031.1| - 0.27 10.7 3.6 7.4 6.1 3.6 2.3 1 1 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 gi|300711217|ref|YP_003737031.1| - 0.46 10.5 3.5 0.3 11.1 1.4 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|300711217|ref|YP_003737031.1| - 0.58 10.3 4.4 1.4 9.1 0.6 2.3 1 1 2 3 3 3 0 Zinc ribbon domain zf-RRN7 PF11781.8 gi|300711217|ref|YP_003737031.1| - 0.64 9.8 2.4 1.3 8.8 2.4 1.5 1 1 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Trm112p PF03966.16 gi|300711217|ref|YP_003737031.1| - 3.3 8.4 8.0 2.5 8.7 0.9 2.9 2 1 1 3 3 2 0 Trm112p-like protein UPF0058 PF01893.16 gi|300711218|ref|YP_003737032.1| - 2.5e-20 72.5 0.2 2.9e-20 72.4 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 DUF555 PF04475.12 gi|300711219|ref|YP_003737033.1| - 6.2e-38 129.2 0.2 6.2e-38 129.2 0.2 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF555) HhH-GPD PF00730.25 gi|300711220|ref|YP_003737034.1| - 1.5e-14 54.4 0.0 2.5e-14 53.6 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 gi|300711220|ref|YP_003737034.1| - 9.3e-08 32.2 0.0 3.6e-07 30.3 0.0 1.8 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain Acylphosphatase PF00708.18 gi|300711222|ref|YP_003737036.1| - 2.9e-24 85.3 0.1 3.2e-24 85.1 0.1 1.0 1 0 0 1 1 1 1 Acylphosphatase YjeF_N PF03853.15 gi|300711224|ref|YP_003737038.1| - 4.3e-43 147.2 1.0 1.1e-42 145.8 0.6 1.8 2 0 0 2 2 2 1 YjeF-related protein N-terminus Carb_kinase PF01256.17 gi|300711224|ref|YP_003737038.1| - 2.3e-42 145.2 0.5 3.2e-42 144.7 0.5 1.2 1 0 0 1 1 1 1 Carbohydrate kinase HK PF02110.15 gi|300711224|ref|YP_003737038.1| - 3.6e-07 29.8 0.4 8e-07 28.7 0.0 1.7 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|300711224|ref|YP_003737038.1| - 8.5e-06 25.3 0.0 2.2e-05 23.9 0.0 1.8 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase MoaC PF01967.21 gi|300711225|ref|YP_003737039.1| - 1.1e-50 171.3 1.8 1.2e-50 171.1 1.8 1.0 1 0 0 1 1 1 1 MoaC family FAD_binding_4 PF01565.23 gi|300711226|ref|YP_003737040.1| - 5.8e-32 110.3 5.6 1.1e-31 109.4 5.6 1.5 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 gi|300711226|ref|YP_003737040.1| - 1.6e-13 50.5 0.8 5.3e-13 48.8 0.8 1.9 1 0 0 1 1 1 1 Berberine and berberine like GTP-bdg_N PF13167.6 gi|300711227|ref|YP_003737041.1| - 4.4e-22 78.6 0.1 1.5e-21 76.8 0.0 2.0 2 0 0 2 2 2 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|300711227|ref|YP_003737041.1| - 7.4e-18 64.7 0.0 1.7e-17 63.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|300711227|ref|YP_003737041.1| - 8.6e-17 61.5 5.4 1.8e-16 60.5 5.4 1.5 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP_EFTU PF00009.27 gi|300711227|ref|YP_003737041.1| - 2.8e-10 40.1 0.0 7.7e-10 38.6 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|300711227|ref|YP_003737041.1| - 3.5e-08 33.5 0.1 0.0023 17.9 0.1 2.7 3 0 0 3 3 3 2 RsgA GTPase cobW PF02492.19 gi|300711227|ref|YP_003737041.1| - 2.6e-06 27.1 0.4 0.00055 19.6 0.1 2.4 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1_Xtn PF16897.5 gi|300711227|ref|YP_003737041.1| - 2.3e-05 24.4 0.0 4.6e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|300711227|ref|YP_003737041.1| - 0.00097 18.7 0.4 1.2 8.7 0.1 2.9 3 0 0 3 3 3 2 Ferrous iron transport protein B Arf PF00025.21 gi|300711227|ref|YP_003737041.1| - 0.0017 17.9 0.3 1.6 8.1 0.1 2.5 2 1 0 2 2 2 2 ADP-ribosylation factor family AAA_18 PF13238.6 gi|300711227|ref|YP_003737041.1| - 0.005 17.4 0.0 0.011 16.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|300711227|ref|YP_003737041.1| - 0.0083 16.2 0.0 0.44 10.6 0.0 2.9 3 0 0 3 3 3 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_14 PF13173.6 gi|300711227|ref|YP_003737041.1| - 0.025 14.6 0.0 0.058 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|300711227|ref|YP_003737041.1| - 0.045 13.3 1.3 0.18 11.4 0.2 2.5 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|300711227|ref|YP_003737041.1| - 0.048 14.0 2.3 0.085 13.2 1.1 2.1 1 1 1 2 2 2 0 AAA ATPase domain DUF2046 PF09755.9 gi|300711227|ref|YP_003737041.1| - 0.065 12.5 2.6 0.18 11.0 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein H4 (DUF2046) AAA_33 PF13671.6 gi|300711227|ref|YP_003737041.1| - 0.089 12.9 0.1 0.53 10.4 0.1 2.3 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 gi|300711227|ref|YP_003737041.1| - 0.089 13.0 0.0 13 6.0 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 gi|300711227|ref|YP_003737041.1| - 0.13 12.8 0.0 0.27 11.7 0.0 1.7 1 0 0 1 1 1 0 ABC transporter DUF2209 PF09974.9 gi|300711228|ref|YP_003737042.1| - 1.3e-41 141.7 0.0 1.4e-41 141.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) SBDS PF01172.18 gi|300711229|ref|YP_003737043.1| - 3.3e-20 71.9 0.0 5e-20 71.4 0.0 1.3 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|300711229|ref|YP_003737043.1| - 3.8e-17 62.4 0.0 8.2e-17 61.3 0.0 1.5 2 0 0 2 2 2 1 SBDS protein C-terminal domain Proteasome PF00227.26 gi|300711230|ref|YP_003737044.1| - 7.7e-57 191.9 0.0 9.5e-57 191.6 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|300711230|ref|YP_003737044.1| - 9.1e-14 50.8 0.1 1.5e-13 50.1 0.1 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature RNase_P_Rpp14 PF01900.19 gi|300711231|ref|YP_003737045.1| - 2e-18 66.5 0.0 2.5e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Rpp14/Pop5 family NikR_C PF08753.11 gi|300711233|ref|YP_003737047.1| - 6.5e-17 61.5 0.1 7e-17 61.4 0.1 1.0 1 0 0 1 1 1 1 NikR C terminal nickel binding domain SBF PF01758.16 gi|300711234|ref|YP_003737048.1| - 9e-17 61.4 10.7 9e-17 61.4 10.7 2.2 1 1 1 2 2 2 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|300711234|ref|YP_003737048.1| - 5.3e-05 22.7 17.6 7.4e-05 22.2 17.6 1.2 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) PrpR_N PF06506.11 gi|300711235|ref|YP_003737049.1| - 0.13 11.8 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Propionate catabolism activator CM_2 PF01817.21 gi|300711236|ref|YP_003737050.1| - 1.9e-15 57.0 3.9 2.1e-15 56.8 3.9 1.0 1 0 0 1 1 1 1 Chorismate mutase type II GHMP_kinases_N PF00288.26 gi|300711237|ref|YP_003737051.1| - 2.4e-12 46.9 1.2 2.4e-12 46.9 1.2 2.3 3 0 0 3 3 3 1 GHMP kinases N terminal domain zf-C2H2_3 PF13878.6 gi|300711239|ref|YP_003737053.1| - 0.1 12.4 1.0 0.19 11.6 1.0 1.5 1 1 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO zf-C2H2 PF00096.26 gi|300711239|ref|YP_003737053.1| - 0.14 12.7 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C2H2 type Mago-bind PF09282.10 gi|300711239|ref|YP_003737053.1| - 0.14 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Mago binding AAA PF00004.29 gi|300711240|ref|YP_003737054.1| - 2.2e-94 312.9 0.0 3.1e-47 160.3 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|300711240|ref|YP_003737054.1| - 7.9e-26 90.1 2.7 3.8e-25 87.9 0.2 3.0 4 0 0 4 4 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|300711240|ref|YP_003737054.1| - 6.3e-24 83.5 7.6 1.5e-12 47.1 2.9 3.1 2 0 0 2 2 2 2 AAA+ lid domain RuvB_N PF05496.12 gi|300711240|ref|YP_003737054.1| - 1.2e-17 64.1 0.0 2.3e-07 30.7 0.0 3.6 4 0 0 4 4 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|300711240|ref|YP_003737054.1| - 6.7e-15 55.9 0.7 2e-06 28.3 0.0 3.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_2 PF07724.14 gi|300711240|ref|YP_003737054.1| - 3.7e-13 49.9 0.0 9.7e-06 25.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|300711240|ref|YP_003737054.1| - 1.5e-12 47.6 0.1 3.5e-05 23.8 0.0 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|300711240|ref|YP_003737054.1| - 1e-11 45.2 0.0 5.5e-05 23.4 0.0 3.0 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|300711240|ref|YP_003737054.1| - 3.5e-10 40.5 0.0 0.00058 20.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|300711240|ref|YP_003737054.1| - 4.6e-10 39.2 0.0 0.00028 20.2 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_14 PF13173.6 gi|300711240|ref|YP_003737054.1| - 5.3e-10 39.4 0.0 0.0003 20.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|300711240|ref|YP_003737054.1| - 2.1e-09 37.8 0.5 0.0081 16.4 0.0 4.0 2 2 2 4 4 4 2 AAA domain AAA_28 PF13521.6 gi|300711240|ref|YP_003737054.1| - 6e-08 33.1 1.0 0.0051 17.1 0.0 3.4 3 0 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 gi|300711240|ref|YP_003737054.1| - 7.4e-08 32.3 0.0 0.0082 15.9 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein TsaE PF02367.17 gi|300711240|ref|YP_003737054.1| - 2.1e-07 31.0 0.0 0.017 15.1 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 gi|300711240|ref|YP_003737054.1| - 7e-07 28.8 0.1 0.04 13.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI CDC48_2 PF02933.17 gi|300711240|ref|YP_003737054.1| - 8.4e-07 28.7 1.2 4.8e-06 26.2 0.2 2.7 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RNA_helicase PF00910.22 gi|300711240|ref|YP_003737054.1| - 1.2e-06 28.8 0.0 0.034 14.5 0.0 2.4 2 0 0 2 2 2 2 RNA helicase Sigma54_activat PF00158.26 gi|300711240|ref|YP_003737054.1| - 1.6e-06 28.0 0.0 0.059 13.1 0.0 3.0 3 0 0 3 3 2 2 Sigma-54 interaction domain AAA_7 PF12775.7 gi|300711240|ref|YP_003737054.1| - 5.2e-06 26.1 0.0 0.023 14.2 0.0 2.5 3 0 0 3 3 2 2 P-loop containing dynein motor region Parvo_NS1 PF01057.17 gi|300711240|ref|YP_003737054.1| - 5.7e-06 25.6 0.0 0.073 12.1 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 gi|300711240|ref|YP_003737054.1| - 7.9e-06 25.6 5.2 0.64 9.6 0.4 4.3 2 2 1 3 3 3 2 AAA domain DUF815 PF05673.13 gi|300711240|ref|YP_003737054.1| - 8.4e-06 25.1 0.0 0.02 14.1 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_3 PF07726.11 gi|300711240|ref|YP_003737054.1| - 1.1e-05 25.3 0.0 0.071 13.0 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|300711240|ref|YP_003737054.1| - 1.2e-05 25.2 0.0 0.2 11.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 gi|300711240|ref|YP_003737054.1| - 1.3e-05 24.6 0.0 0.094 12.0 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_30 PF13604.6 gi|300711240|ref|YP_003737054.1| - 2.5e-05 24.1 0.0 0.5 10.1 0.0 3.2 3 0 0 3 3 3 2 AAA domain ABC_tran PF00005.27 gi|300711240|ref|YP_003737054.1| - 4.7e-05 23.9 0.0 0.38 11.3 0.0 2.7 3 0 0 3 3 2 2 ABC transporter AAA_11 PF13086.6 gi|300711240|ref|YP_003737054.1| - 5e-05 23.2 0.0 0.26 11.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain Sigma54_activ_2 PF14532.6 gi|300711240|ref|YP_003737054.1| - 6.5e-05 23.1 0.0 0.31 11.2 0.0 2.6 2 1 0 2 2 2 2 Sigma-54 interaction domain PhoH PF02562.16 gi|300711240|ref|YP_003737054.1| - 9.5e-05 21.9 0.2 0.56 9.6 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein NACHT PF05729.12 gi|300711240|ref|YP_003737054.1| - 0.00016 21.7 0.1 0.39 10.6 0.0 3.3 3 0 0 3 3 3 1 NACHT domain DUF2075 PF09848.9 gi|300711240|ref|YP_003737054.1| - 0.00016 21.1 0.0 0.2 10.8 0.0 2.5 2 1 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 gi|300711240|ref|YP_003737054.1| - 0.00019 21.8 0.2 1 9.8 0.0 3.1 3 0 0 3 3 2 2 AAA domain ATPase PF06745.13 gi|300711240|ref|YP_003737054.1| - 0.0002 20.8 0.0 0.45 9.8 0.0 2.6 2 0 0 2 2 2 2 KaiC ATPase_2 PF01637.18 gi|300711240|ref|YP_003737054.1| - 0.00027 21.0 0.0 0.51 10.2 0.0 2.9 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|300711240|ref|YP_003737054.1| - 0.00057 19.1 0.0 0.82 8.8 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain AAA_19 PF13245.6 gi|300711240|ref|YP_003737054.1| - 0.00058 20.2 0.0 1.2 9.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 gi|300711240|ref|YP_003737054.1| - 0.0044 16.4 0.0 8.9 5.7 0.0 3.5 3 1 1 4 4 4 0 Bacterial TniB protein Cytidylate_kin2 PF13189.6 gi|300711240|ref|YP_003737054.1| - 0.0087 16.2 0.7 1.2 9.2 0.0 2.6 3 0 0 3 3 2 1 Cytidylate kinase-like family Rad17 PF03215.15 gi|300711240|ref|YP_003737054.1| - 0.011 15.7 0.0 4.9 7.0 0.0 2.3 2 0 0 2 2 2 0 Rad17 P-loop domain Cytidylate_kin PF02224.18 gi|300711240|ref|YP_003737054.1| - 0.012 15.3 0.1 5.7 6.6 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase CPT PF07931.12 gi|300711240|ref|YP_003737054.1| - 0.017 15.0 0.0 6.1 6.7 0.0 2.6 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AFG1_ATPase PF03969.16 gi|300711240|ref|YP_003737054.1| - 0.026 13.4 0.0 1.3 7.8 0.0 2.2 2 0 0 2 2 2 0 AFG1-like ATPase NTPase_1 PF03266.15 gi|300711240|ref|YP_003737054.1| - 0.032 14.1 0.0 3.9 7.4 0.0 2.8 2 1 0 2 2 2 0 NTPase Bac_DnaA PF00308.18 gi|300711240|ref|YP_003737054.1| - 0.033 14.0 0.0 8.4 6.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial dnaA protein T2SSE PF00437.20 gi|300711240|ref|YP_003737054.1| - 0.041 12.9 0.5 9.9 5.1 0.0 3.1 3 0 0 3 3 3 0 Type II/IV secretion system protein SKI PF01202.22 gi|300711240|ref|YP_003737054.1| - 0.05 13.7 0.0 11 6.1 0.0 2.4 2 0 0 2 2 2 0 Shikimate kinase ResIII PF04851.15 gi|300711240|ref|YP_003737054.1| - 0.069 13.1 0.0 6.8 6.7 0.0 2.5 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit IPT PF01745.16 gi|300711240|ref|YP_003737054.1| - 0.1 12.0 0.0 6.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Isopentenyl transferase PIF1 PF05970.14 gi|300711240|ref|YP_003737054.1| - 0.22 10.7 0.0 19 4.3 0.0 2.7 3 1 0 3 3 2 0 PIF1-like helicase AAA_13 PF13166.6 gi|300711240|ref|YP_003737054.1| - 0.24 10.0 0.0 9 4.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain PS_Dcarbxylase PF02666.15 gi|300711241|ref|YP_003737055.1| - 4.7e-23 81.8 0.2 1.4e-20 73.7 0.2 2.1 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase Biotin_lipoyl PF00364.22 gi|300711241|ref|YP_003737055.1| - 0.0025 17.6 0.0 9.2 6.2 0.0 3.5 4 0 0 4 4 4 2 Biotin-requiring enzyme TcpE PF12648.7 gi|300711242|ref|YP_003737056.1| - 0.12 12.9 0.3 0.14 12.7 0.3 1.1 1 0 0 1 1 1 0 TcpE family DUF4407 PF14362.6 gi|300711242|ref|YP_003737056.1| - 0.38 10.1 1.3 0.43 9.9 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DEAD_assoc PF08494.11 gi|300711243|ref|YP_003737057.1| - 1e-38 133.1 0.0 2.9e-38 131.6 0.0 1.9 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|300711243|ref|YP_003737057.1| - 1.3e-28 100.0 0.0 2.9e-28 98.8 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|300711243|ref|YP_003737057.1| - 3.1e-22 79.0 0.0 1.2e-20 73.9 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|300711243|ref|YP_003737057.1| - 1.3e-09 38.3 0.0 3.6e-09 36.9 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|300711243|ref|YP_003737057.1| - 6.8e-05 23.2 0.1 0.0018 18.6 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|300711243|ref|YP_003737057.1| - 0.00097 18.8 1.1 0.0025 17.4 0.2 2.2 2 0 0 2 2 2 1 AAA domain SNF2_N PF00176.23 gi|300711243|ref|YP_003737057.1| - 0.0052 15.5 0.0 0.0094 14.7 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Zn-ribbon_8 PF09723.10 gi|300711243|ref|YP_003737057.1| - 0.018 15.1 1.3 0.045 13.9 1.3 1.6 1 0 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 gi|300711243|ref|YP_003737057.1| - 0.039 14.0 0.4 0.1 12.6 0.4 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_30 PF13604.6 gi|300711243|ref|YP_003737057.1| - 0.039 13.7 0.5 0.26 11.0 0.5 2.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|300711243|ref|YP_003737057.1| - 0.041 14.2 0.1 12 6.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain YdjO PF14169.6 gi|300711243|ref|YP_003737057.1| - 0.14 11.9 0.5 0.43 10.3 0.5 1.8 1 0 0 1 1 1 0 Cold-inducible protein YdjO Metallophos_2 PF12850.7 gi|300711244|ref|YP_003737058.1| - 8.9e-08 32.5 0.0 1.3e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|300711244|ref|YP_003737058.1| - 2.2e-07 31.6 0.1 1.4e-06 28.9 0.1 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Jiraiya PF15038.6 gi|300711244|ref|YP_003737058.1| - 0.25 10.8 0.0 0.41 10.0 0.0 1.3 1 0 0 1 1 1 0 Jiraiya tRNA_anti-codon PF01336.25 gi|300711246|ref|YP_003737060.1| - 0.003 17.5 1.7 2.2 8.4 0.0 4.1 4 0 0 4 4 4 1 OB-fold nucleic acid binding domain zf-RING_7 PF02591.15 gi|300711246|ref|YP_003737060.1| - 0.013 15.7 0.2 0.028 14.6 0.2 1.6 1 0 0 1 1 1 0 C4-type zinc ribbon domain RibD_C PF01872.17 gi|300711247|ref|YP_003737061.1| - 5.6e-52 176.5 0.1 6.9e-52 176.2 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain PALP PF00291.25 gi|300711247|ref|YP_003737061.1| - 0.063 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme BAT PF15915.5 gi|300711248|ref|YP_003737062.1| - 1e-40 139.2 1.0 1e-40 139.2 1.0 2.0 2 0 0 2 2 2 1 GAF and HTH_10 associated domain PAS_9 PF13426.7 gi|300711248|ref|YP_003737062.1| - 6e-21 74.7 0.0 1.2e-20 73.6 0.0 1.6 1 0 0 1 1 1 1 PAS domain HTH_10 PF04967.12 gi|300711248|ref|YP_003737062.1| - 8e-21 73.6 0.0 1.5e-20 72.7 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain GAF_2 PF13185.6 gi|300711248|ref|YP_003737062.1| - 8.8e-15 55.2 1.7 2.1e-14 54.0 1.3 1.9 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|300711248|ref|YP_003737062.1| - 1e-09 38.4 0.4 3.8e-09 36.5 0.0 2.2 3 0 0 3 3 2 1 PAS fold PAS_3 PF08447.12 gi|300711248|ref|YP_003737062.1| - 3.7e-09 36.8 0.0 8e-09 35.7 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 gi|300711248|ref|YP_003737062.1| - 1.5e-08 34.8 0.7 6e-08 32.9 0.1 2.3 2 0 0 2 2 2 1 PAS fold GAF PF01590.26 gi|300711248|ref|YP_003737062.1| - 4.3e-08 33.9 0.0 8.7e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|300711248|ref|YP_003737062.1| - 1.2e-07 32.1 0.0 2.5e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 GAF domain Sigma70_r4 PF04545.16 gi|300711248|ref|YP_003737062.1| - 5.8e-07 28.9 0.9 6.1e-06 25.7 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 PAS_8 PF13188.7 gi|300711248|ref|YP_003737062.1| - 3.6e-05 23.7 0.0 0.00014 21.8 0.0 2.0 1 0 0 1 1 1 1 PAS domain HTH_24 PF13412.6 gi|300711248|ref|YP_003737062.1| - 0.0041 16.7 0.0 0.011 15.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|300711248|ref|YP_003737062.1| - 0.0063 16.2 0.2 0.03 14.0 0.2 2.2 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|300711248|ref|YP_003737062.1| - 0.027 14.4 0.0 0.071 13.1 0.0 1.6 1 0 0 1 1 1 0 HTH domain DUF134 PF02001.16 gi|300711248|ref|YP_003737062.1| - 0.046 14.3 0.0 0.18 12.3 0.0 2.0 2 0 0 2 2 1 0 Protein of unknown function DUF134 Sec-ASP3 PF15432.6 gi|300711248|ref|YP_003737062.1| - 0.05 13.8 0.0 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 Accessory Sec secretory system ASP3 HTH_23 PF13384.6 gi|300711248|ref|YP_003737062.1| - 0.064 13.1 0.1 0.23 11.3 0.1 2.0 1 0 0 1 1 1 0 Homeodomain-like domain GerE PF00196.19 gi|300711248|ref|YP_003737062.1| - 0.068 12.7 0.3 0.16 11.5 0.0 1.7 2 0 0 2 2 1 0 Bacterial regulatory proteins, luxR family HTH_40 PF14493.6 gi|300711248|ref|YP_003737062.1| - 0.12 12.9 0.2 4.4 7.8 0.0 2.7 3 0 0 3 3 2 0 Helix-turn-helix domain PAS_7 PF12860.7 gi|300711248|ref|YP_003737062.1| - 0.12 12.5 0.0 0.42 10.8 0.0 2.0 1 1 0 1 1 1 0 PAS fold UPF0122 PF04297.14 gi|300711248|ref|YP_003737062.1| - 0.14 12.4 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF1492 PF07374.11 gi|300711248|ref|YP_003737062.1| - 0.22 11.7 0.2 2.1 8.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1492) DUF4397 PF14344.6 gi|300711249|ref|YP_003737063.1| - 3.5e-40 137.6 3.1 8.9e-34 116.9 3.3 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4397) AlgF PF11182.8 gi|300711249|ref|YP_003737063.1| - 0.08 12.7 0.1 0.44 10.3 0.0 2.0 2 0 0 2 2 2 0 Alginate O-acetyl transferase AlgF TcfC PF16967.5 gi|300711249|ref|YP_003737063.1| - 0.098 12.2 0.0 0.31 10.5 0.0 1.9 2 1 0 2 2 2 0 E-set like domain HATPase_c PF02518.26 gi|300711252|ref|YP_003737066.1| - 1.2e-11 45.1 0.1 2.4e-11 44.1 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|300711252|ref|YP_003737066.1| - 1.4e-09 38.1 0.0 3.1e-09 37.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|300711252|ref|YP_003737066.1| - 2.9e-08 33.9 0.1 8.8e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 gi|300711252|ref|YP_003737066.1| - 6e-07 29.5 0.0 1.3e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 gi|300711252|ref|YP_003737066.1| - 0.00083 19.3 0.0 0.0022 18.0 0.0 1.7 1 0 0 1 1 1 1 PAS domain HATPase_c_5 PF14501.6 gi|300711252|ref|YP_003737066.1| - 0.0064 16.4 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 gi|300711252|ref|YP_003737066.1| - 0.0084 15.7 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase PAS_3 PF08447.12 gi|300711252|ref|YP_003737066.1| - 0.016 15.5 0.0 0.037 14.3 0.0 1.6 1 0 0 1 1 1 0 PAS fold HisKA PF00512.25 gi|300711252|ref|YP_003737066.1| - 0.023 14.7 0.7 0.053 13.6 0.7 1.6 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.6 gi|300711252|ref|YP_003737066.1| - 0.15 12.1 1.1 0.3 11.0 0.2 1.9 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|300711252|ref|YP_003737066.1| - 0.15 11.8 0.7 0.36 10.6 0.7 1.7 1 1 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain BNR PF02012.20 gi|300711253|ref|YP_003737067.1| - 0.00013 21.5 3.4 0.14 12.3 1.9 3.2 2 0 0 2 2 2 2 BNR/Asp-box repeat Sortilin-Vps10 PF15902.5 gi|300711253|ref|YP_003737067.1| - 0.00013 20.9 0.1 0.00022 20.2 0.1 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, PSII_BNR PF14870.6 gi|300711253|ref|YP_003737067.1| - 0.035 13.4 0.1 0.066 12.5 0.1 1.5 1 1 0 1 1 1 0 Photosynthesis system II assembly factor YCF48 ATPgrasp_Ter PF15632.6 gi|300711254|ref|YP_003737068.1| - 6.9e-10 38.8 0.0 1.3e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|300711254|ref|YP_003737068.1| - 1e-05 25.2 0.0 4.5e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|300711254|ref|YP_003737068.1| - 2e-05 24.7 0.0 6.8e-05 23.0 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain Hexapep PF00132.24 gi|300711255|ref|YP_003737069.1| - 9.5e-13 47.3 2.5 5.4e-09 35.4 0.5 3.2 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300711255|ref|YP_003737069.1| - 1.3e-09 37.6 4.4 1.7e-08 34.1 0.3 2.9 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase LPG_synthase_TM PF03706.13 gi|300711256|ref|YP_003737070.1| - 5.9e-05 22.7 42.6 5.9e-05 22.7 42.6 3.8 2 2 1 3 3 3 1 Lysylphosphatidylglycerol synthase TM region HCV_NS4a PF01006.20 gi|300711256|ref|YP_003737070.1| - 0.23 11.3 0.1 0.23 11.3 0.1 4.5 4 0 0 4 4 4 0 Hepatitis C virus non-structural protein NS4a Zn-ribbon_8 PF09723.10 gi|300711257|ref|YP_003737071.1| - 0.0028 17.7 3.3 0.048 13.8 0.2 2.2 2 0 0 2 2 2 1 Zinc ribbon domain DiS_P_DiS PF06750.13 gi|300711257|ref|YP_003737071.1| - 0.0057 16.7 0.0 0.0061 16.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial Peptidase A24 N-terminal domain DZR PF12773.7 gi|300711257|ref|YP_003737071.1| - 0.011 15.8 0.3 0.017 15.1 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-IS66 PF13005.7 gi|300711257|ref|YP_003737071.1| - 0.028 14.8 3.2 0.18 12.2 0.1 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Neisseria_TspB PF05616.13 gi|300711257|ref|YP_003737071.1| - 0.075 11.5 0.0 0.075 11.5 0.0 1.2 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein zf_Rg PF17915.1 gi|300711257|ref|YP_003737071.1| - 0.11 11.9 3.2 0.68 9.4 3.2 2.1 1 1 0 1 1 1 0 Reverse gyrase zinc finger zinc_ribbon_2 PF13240.6 gi|300711257|ref|YP_003737071.1| - 0.18 11.6 3.2 0.41 10.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain IMPDH PF00478.25 gi|300711259|ref|YP_003737073.1| - 2.4e-137 457.6 6.5 2.7e-137 457.4 6.5 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|300711259|ref|YP_003737073.1| - 2.5e-23 82.3 3.0 2.5e-11 43.8 0.1 2.6 2 0 0 2 2 2 2 CBS domain NMO PF03060.15 gi|300711259|ref|YP_003737073.1| - 1.4e-12 47.7 2.0 4.7e-07 29.5 1.1 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.18 gi|300711259|ref|YP_003737073.1| - 6.4e-09 35.3 1.8 1e-08 34.6 1.8 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|300711259|ref|YP_003737073.1| - 9.2e-06 25.1 8.0 4.8e-05 22.8 1.2 2.4 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Glu_synthase PF01645.17 gi|300711259|ref|YP_003737073.1| - 3.8e-05 23.0 3.8 6.5e-05 22.2 3.8 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.21 gi|300711259|ref|YP_003737073.1| - 8.7e-05 21.9 1.4 0.00017 20.9 1.4 1.5 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|300711259|ref|YP_003737073.1| - 0.0004 19.9 3.7 0.0004 19.9 3.7 1.9 2 1 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.17 gi|300711259|ref|YP_003737073.1| - 0.0012 18.0 0.1 0.0025 17.0 0.1 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 gi|300711259|ref|YP_003737073.1| - 0.04 13.3 0.1 0.085 12.3 0.1 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator ADH_zinc_N PF00107.26 gi|300711259|ref|YP_003737073.1| - 0.12 12.4 2.1 4.5 7.3 0.2 3.0 3 0 0 3 3 3 0 Zinc-binding dehydrogenase DUF3377 PF11857.8 gi|300711262|ref|YP_003737076.1| - 0.13 12.2 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) TrkA_N PF02254.18 gi|300711263|ref|YP_003737077.1| - 1.4e-20 73.7 1.9 3.1e-20 72.6 1.1 2.1 2 0 0 2 2 2 1 TrkA-N domain DHH PF01368.20 gi|300711263|ref|YP_003737077.1| - 1e-14 54.6 1.7 4.3e-13 49.4 0.3 2.3 2 0 0 2 2 2 1 DHH family F420_oxidored PF03807.17 gi|300711263|ref|YP_003737077.1| - 1.1e-07 32.3 0.1 4e-07 30.5 0.1 2.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DHHA1 PF02272.19 gi|300711263|ref|YP_003737077.1| - 1.6e-06 28.6 0.2 0.00012 22.5 0.0 2.8 2 1 1 3 3 3 1 DHHA1 domain ApbA PF02558.16 gi|300711263|ref|YP_003737077.1| - 2.4e-06 27.3 0.0 7.1e-06 25.7 0.0 1.8 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 gi|300711263|ref|YP_003737077.1| - 1.2e-05 25.4 0.6 3.8e-05 23.8 0.1 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|300711263|ref|YP_003737077.1| - 3.3e-05 24.1 1.5 7e-05 23.1 0.3 2.2 3 0 0 3 3 2 1 Saccharopine dehydrogenase NADP binding domain IlvN PF07991.12 gi|300711263|ref|YP_003737077.1| - 0.00012 21.7 0.2 0.00026 20.6 0.2 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Epimerase PF01370.21 gi|300711263|ref|YP_003737077.1| - 0.00017 21.2 0.8 0.00065 19.2 0.1 2.0 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_2 PF03446.15 gi|300711263|ref|YP_003737077.1| - 0.00099 19.3 0.0 0.002 18.3 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|300711263|ref|YP_003737077.1| - 0.0012 18.5 0.1 0.0028 17.2 0.1 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 gi|300711263|ref|YP_003737077.1| - 0.0013 18.0 1.0 0.0044 16.4 0.4 2.1 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|300711263|ref|YP_003737077.1| - 0.0014 18.6 0.0 0.0036 17.2 0.0 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|300711263|ref|YP_003737077.1| - 0.0017 18.8 0.1 0.0069 16.8 0.1 2.0 1 0 0 1 1 1 1 Putative NAD(P)-binding adh_short_C2 PF13561.6 gi|300711263|ref|YP_003737077.1| - 0.0018 17.8 2.3 0.019 14.5 1.1 2.3 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase NAD_Gly3P_dh_N PF01210.23 gi|300711263|ref|YP_003737077.1| - 0.0027 17.7 0.0 0.0057 16.7 0.0 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.19 gi|300711263|ref|YP_003737077.1| - 0.012 14.9 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain adh_short PF00106.25 gi|300711263|ref|YP_003737077.1| - 0.014 14.9 1.9 0.025 14.0 0.1 2.2 3 0 0 3 3 3 0 short chain dehydrogenase 2-Hacid_dh_C PF02826.19 gi|300711263|ref|YP_003737077.1| - 0.027 13.8 0.0 0.058 12.7 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 gi|300711263|ref|YP_003737077.1| - 0.13 11.6 0.0 0.41 9.9 0.0 1.8 1 0 0 1 1 1 0 ThiF family UPF0146 PF03686.13 gi|300711263|ref|YP_003737077.1| - 0.32 10.9 2.3 4.5 7.2 0.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0146) PRC PF05239.16 gi|300711264|ref|YP_003737078.1| - 6.3e-14 51.8 1.8 7.9e-14 51.5 1.8 1.1 1 0 0 1 1 1 1 PRC-barrel domain RcnB PF11776.8 gi|300711264|ref|YP_003737078.1| - 0.012 15.7 0.4 0.022 14.8 0.4 1.4 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator DUF2171 PF09939.9 gi|300711264|ref|YP_003737078.1| - 0.033 14.5 0.5 0.12 12.6 0.5 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) DUF4083 PF13314.6 gi|300711265|ref|YP_003737079.1| - 3.2 7.8 5.0 13 5.8 5.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Phage_holin_2_1 PF04971.12 gi|300711265|ref|YP_003737079.1| - 6.1 6.9 10.7 1.4 9.0 0.1 3.0 3 0 0 3 3 3 0 Bacteriophage P21 holin S ABC-3 PF00950.17 gi|300711266|ref|YP_003737080.1| - 1.6e-57 195.0 34.5 2.3e-57 194.4 34.5 1.2 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|300711266|ref|YP_003737080.1| - 3.8e-05 22.9 36.5 3.8e-05 22.9 36.5 2.0 1 1 1 2 2 2 1 FecCD transport family Phage_holin_2_4 PF16082.5 gi|300711266|ref|YP_003737080.1| - 0.075 12.8 0.1 0.075 12.8 0.1 4.3 4 1 2 6 6 6 0 Bacteriophage holin family, superfamily II-like ABC_tran PF00005.27 gi|300711267|ref|YP_003737081.1| - 1.2e-30 106.8 0.0 1.7e-30 106.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300711267|ref|YP_003737081.1| - 6.2e-11 42.7 0.1 6.2e-05 23.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|300711267|ref|YP_003737081.1| - 0.00038 19.9 0.1 0.0023 17.4 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|300711267|ref|YP_003737081.1| - 0.0027 18.1 0.7 0.012 16.0 0.7 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|300711267|ref|YP_003737081.1| - 0.0044 16.7 0.1 0.0085 15.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|300711267|ref|YP_003737081.1| - 0.007 16.9 0.3 0.0083 16.6 0.3 1.4 1 1 0 1 1 1 1 AAA domain MobB PF03205.14 gi|300711267|ref|YP_003737081.1| - 0.011 15.7 0.0 0.17 11.7 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Peripla_BP_4 PF13407.6 gi|300711267|ref|YP_003737081.1| - 0.013 15.1 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain AFG1_ATPase PF03969.16 gi|300711267|ref|YP_003737081.1| - 0.013 14.4 1.1 0.046 12.6 0.1 1.9 2 0 0 2 2 2 0 AFG1-like ATPase AAA_15 PF13175.6 gi|300711267|ref|YP_003737081.1| - 0.023 14.4 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|300711267|ref|YP_003737081.1| - 0.028 14.2 0.1 0.12 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|300711267|ref|YP_003737081.1| - 0.03 14.6 0.1 0.16 12.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|300711267|ref|YP_003737081.1| - 0.031 14.5 0.7 1 9.6 0.7 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit T2SSE PF00437.20 gi|300711267|ref|YP_003737081.1| - 0.036 13.1 0.0 0.094 11.8 0.0 1.7 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 gi|300711267|ref|YP_003737081.1| - 0.043 13.4 0.0 0.077 12.6 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|300711267|ref|YP_003737081.1| - 0.077 13.1 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|300711267|ref|YP_003737081.1| - 0.2 10.8 0.1 0.31 10.2 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|300711267|ref|YP_003737081.1| - 0.24 11.3 0.5 0.46 10.4 0.1 1.7 2 0 0 2 2 2 0 NACHT domain SRPRB PF09439.10 gi|300711267|ref|YP_003737081.1| - 0.35 10.3 0.6 8.8 5.7 0.1 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit ZnuA PF01297.17 gi|300711268|ref|YP_003737082.1| - 1.2e-52 178.8 0.0 1.5e-52 178.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic UCR_Fe-S_N PF10399.9 gi|300711268|ref|YP_003737082.1| - 0.12 11.8 2.9 0.27 10.6 2.9 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal tRNA_edit PF04073.15 gi|300711269|ref|YP_003737083.1| - 1.6e-33 115.4 0.0 1.9e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain NBD_C PF17042.5 gi|300711269|ref|YP_003737083.1| - 0.056 14.0 0.1 0.087 13.3 0.1 1.3 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain 2-Hacid_dh_C PF02826.19 gi|300711269|ref|YP_003737083.1| - 0.061 12.7 0.0 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PfkB PF00294.24 gi|300711270|ref|YP_003737084.1| - 5.8e-61 206.4 0.0 6.5e-61 206.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase MDMPI_C PF07398.11 gi|300711270|ref|YP_003737084.1| - 0.0017 19.1 2.4 0.0017 19.1 2.4 2.7 2 2 1 3 3 3 1 MDMPI C-terminal domain OB_aCoA_assoc PF01796.17 gi|300711270|ref|YP_003737084.1| - 0.052 13.5 0.3 0.17 11.9 0.3 1.8 1 0 0 1 1 1 0 DUF35 OB-fold domain, acyl-CoA-associated Ferritin PF00210.24 gi|300711271|ref|YP_003737085.1| - 4.5e-30 104.5 4.8 5.7e-30 104.1 4.8 1.1 1 0 0 1 1 1 1 Ferritin-like domain SIMPL PF04402.14 gi|300711271|ref|YP_003737085.1| - 0.05 14.1 0.1 0.11 12.9 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF541) DUF1451 PF07295.11 gi|300711271|ref|YP_003737085.1| - 1 9.4 7.1 4.8 7.2 0.7 2.7 2 2 0 2 2 2 0 Zinc-ribbon containing domain NIF3 PF01784.18 gi|300711273|ref|YP_003737087.1| - 2.5e-06 27.3 0.2 0.0035 17.0 0.0 2.1 2 0 0 2 2 2 2 NIF3 (NGG1p interacting factor 3) Oxidored_FMN PF00724.20 gi|300711274|ref|YP_003737088.1| - 2.6e-68 230.8 0.0 2.9e-68 230.6 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.21 gi|300711274|ref|YP_003737088.1| - 0.0019 17.7 0.0 0.0032 17.0 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|300711274|ref|YP_003737088.1| - 0.004 16.3 0.0 0.0067 15.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) H-kinase_dim PF02895.14 gi|300711275|ref|YP_003737089.1| - 0.062 13.7 2.0 0.61 10.5 0.1 2.5 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain FtsQ PF03799.15 gi|300711275|ref|YP_003737089.1| - 0.19 12.6 2.9 0.41 11.5 0.8 2.5 2 1 1 3 3 3 0 Cell division protein FtsQ Acyl-CoA_dh_2 PF08028.11 gi|300711275|ref|YP_003737089.1| - 0.35 11.2 9.8 0.93 9.8 4.0 2.2 1 1 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain CDPS PF16715.5 gi|300711275|ref|YP_003737089.1| - 0.55 9.8 3.9 1.4 8.5 3.9 1.7 1 1 0 1 1 1 0 Cyclodipeptide synthase Atrophin-1 PF03154.15 gi|300711275|ref|YP_003737089.1| - 1.6 6.9 3.7 2.8 6.1 3.7 1.3 1 0 0 1 1 1 0 Atrophin-1 family ZapB PF06005.12 gi|300711275|ref|YP_003737089.1| - 6.5 7.3 7.9 12 6.5 0.3 3.1 3 0 0 3 3 3 0 Cell division protein ZapB OB_aCoA_assoc PF01796.17 gi|300711276|ref|YP_003737090.1| - 6.2e-08 32.5 0.5 1.1e-07 31.7 0.5 1.4 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated Thiolase_N PF00108.23 gi|300711277|ref|YP_003737091.1| - 1.3e-51 175.5 0.0 2e-51 174.9 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|300711277|ref|YP_003737091.1| - 9.1e-08 31.8 0.1 1.6e-07 31.0 0.1 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Ketoacyl-synt_C PF02801.22 gi|300711277|ref|YP_003737091.1| - 0.0014 18.7 0.2 0.31 11.1 0.1 2.5 2 0 0 2 2 2 2 Beta-ketoacyl synthase, C-terminal domain DoxX PF07681.12 gi|300711278|ref|YP_003737092.1| - 5.7e-08 33.2 9.9 5.7e-08 33.2 9.9 2.0 2 1 0 2 2 2 1 DoxX DoxD PF04173.13 gi|300711278|ref|YP_003737092.1| - 0.01 15.7 5.5 0.041 13.8 5.5 1.7 1 1 0 1 1 1 0 TQO small subunit DoxD adh_short_C2 PF13561.6 gi|300711279|ref|YP_003737093.1| - 2e-65 220.6 4.3 2.4e-65 220.4 4.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300711279|ref|YP_003737093.1| - 1.3e-56 191.2 1.6 1.5e-56 190.9 1.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300711279|ref|YP_003737093.1| - 1e-20 74.4 0.8 1.6e-20 73.7 0.8 1.3 1 1 0 1 1 1 1 KR domain TRCF PF03461.15 gi|300711279|ref|YP_003737093.1| - 0.0091 16.4 0.0 0.019 15.3 0.0 1.5 1 0 0 1 1 1 1 TRCF domain Epimerase PF01370.21 gi|300711279|ref|YP_003737093.1| - 0.011 15.2 0.2 0.015 14.8 0.2 1.3 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 gi|300711279|ref|YP_003737093.1| - 0.08 12.3 0.0 0.19 11.0 0.0 1.6 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Abhydrolase_1 PF00561.20 gi|300711280|ref|YP_003737094.1| - 5.7e-23 81.9 0.0 8.4e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold PhaC_N PF07167.13 gi|300711280|ref|YP_003737094.1| - 8.8e-13 48.3 0.0 1.4e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HHH_5 PF14520.6 gi|300711280|ref|YP_003737094.1| - 3e-11 43.8 0.1 6.7e-11 42.6 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain DUF3141 PF11339.8 gi|300711280|ref|YP_003737094.1| - 1.4e-10 40.3 0.0 6.1e-09 34.9 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3141) Hydrolase_4 PF12146.8 gi|300711280|ref|YP_003737094.1| - 1.7e-09 37.3 0.0 3.5e-05 23.2 0.0 2.4 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|300711280|ref|YP_003737094.1| - 5.6e-06 26.1 0.0 0.002 17.7 0.0 2.4 2 0 0 2 2 2 2 Dienelactone hydrolase family Cdd1 PF11731.8 gi|300711280|ref|YP_003737094.1| - 1.9e-05 24.8 0.0 4.9e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|300711280|ref|YP_003737094.1| - 0.00039 20.2 0.0 0.00084 19.1 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda DUF4332 PF14229.6 gi|300711280|ref|YP_003737094.1| - 0.00062 20.0 0.0 0.0021 18.3 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4332) FSH1 PF03959.13 gi|300711280|ref|YP_003737094.1| - 0.0016 18.2 0.0 0.015 14.9 0.0 2.1 2 0 0 2 2 2 1 Serine hydrolase (FSH1) PHB_depo_C PF06850.11 gi|300711280|ref|YP_003737094.1| - 0.0047 16.4 0.0 0.0084 15.6 0.0 1.5 1 0 0 1 1 1 1 PHB de-polymerase C-terminus PGAP1 PF07819.13 gi|300711280|ref|YP_003737094.1| - 0.0096 15.7 0.0 0.019 14.7 0.0 1.6 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 gi|300711280|ref|YP_003737094.1| - 0.0099 15.7 0.0 0.092 12.6 0.0 2.4 1 1 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_6 PF12697.7 gi|300711280|ref|YP_003737094.1| - 0.013 16.1 0.0 0.022 15.4 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family Homez PF11569.8 gi|300711280|ref|YP_003737094.1| - 0.032 13.7 0.1 0.12 11.9 0.0 1.9 2 0 0 2 2 2 0 Homeodomain leucine-zipper encoding, Homez LIP PF03583.14 gi|300711280|ref|YP_003737094.1| - 0.062 12.6 0.0 0.17 11.2 0.0 1.7 1 1 0 1 1 1 0 Secretory lipase DUF2048 PF09752.9 gi|300711280|ref|YP_003737094.1| - 0.11 11.6 0.6 0.21 10.7 0.6 1.4 1 0 0 1 1 1 0 Abhydrolase domain containing 18 PHA_synth_III_E PF09712.10 gi|300711281|ref|YP_003737095.1| - 7.9e-11 41.6 12.6 2.5e-09 36.7 0.2 2.0 1 1 1 2 2 2 2 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Phasin PF05597.11 gi|300711281|ref|YP_003737095.1| - 0.0042 17.1 1.1 0.0042 17.1 1.1 2.2 1 1 1 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) FliD_C PF07195.12 gi|300711281|ref|YP_003737095.1| - 0.0087 15.5 0.2 0.027 13.9 0.1 1.8 1 1 1 2 2 2 1 Flagellar hook-associated protein 2 C-terminus Mating_N PF12731.7 gi|300711281|ref|YP_003737095.1| - 0.027 14.6 2.3 0.59 10.2 0.3 2.5 2 2 0 2 2 2 0 Mating-type protein beta 1 DinB_2 PF12867.7 gi|300711281|ref|YP_003737095.1| - 0.033 14.7 1.1 0.17 12.4 1.1 2.1 1 1 0 1 1 1 0 DinB superfamily IMD PF08397.11 gi|300711281|ref|YP_003737095.1| - 0.042 13.2 0.2 0.96 8.8 0.0 2.2 2 0 0 2 2 2 0 IRSp53/MIM homology domain DELLA PF12041.8 gi|300711281|ref|YP_003737095.1| - 0.056 13.3 2.4 1.1 9.2 0.1 2.4 2 0 0 2 2 2 0 Transcriptional regulator DELLA protein N terminal Tox-REase-5 PF15648.6 gi|300711282|ref|YP_003737096.1| - 0.031 14.8 2.6 0.05 14.1 0.6 2.0 1 1 1 2 2 2 0 Restriction endonuclease fold toxin 5 DUF883 PF05957.13 gi|300711282|ref|YP_003737096.1| - 0.054 14.1 9.3 0.099 13.3 3.9 2.2 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) PET PF06297.14 gi|300711282|ref|YP_003737096.1| - 0.056 13.7 0.0 0.089 13.1 0.0 1.4 1 0 0 1 1 1 0 PET Domain aGPT-Pplase2 PF18724.1 gi|300711282|ref|YP_003737096.1| - 0.067 13.0 0.9 0.093 12.5 0.6 1.4 1 1 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 2 Zw10 PF06248.13 gi|300711282|ref|YP_003737096.1| - 0.076 11.6 1.8 0.11 11.1 1.8 1.1 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 MT0933_antitox PF14013.6 gi|300711282|ref|YP_003737096.1| - 0.09 13.1 2.0 0.09 13.1 2.0 2.8 2 2 1 3 3 3 0 MT0933-like antitoxin protein DUF2353 PF09789.9 gi|300711282|ref|YP_003737096.1| - 0.096 12.0 2.8 0.12 11.8 2.8 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) Phasin_2 PF09361.10 gi|300711282|ref|YP_003737096.1| - 0.12 12.7 12.3 4.6 7.6 0.2 3.1 1 1 2 3 3 3 0 Phasin protein SUKH-4 PF14435.6 gi|300711282|ref|YP_003737096.1| - 0.23 11.5 4.2 7.3 6.6 0.8 2.2 1 1 1 2 2 2 0 SUKH-4 immunity protein DUF2524 PF10732.9 gi|300711282|ref|YP_003737096.1| - 0.43 10.9 8.5 2.6 8.4 4.8 2.7 2 1 0 3 3 3 0 Protein of unknown function (DUF2524) SLATT_1 PF18181.1 gi|300711282|ref|YP_003737096.1| - 0.48 10.4 4.6 0.9 9.5 4.6 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 MazE_antitoxin PF04014.18 gi|300711283|ref|YP_003737097.1| - 0.055 13.4 0.3 0.087 12.8 0.3 1.3 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin AbrB-like PF14250.6 gi|300711283|ref|YP_003737097.1| - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 AbrB-like transcriptional regulator MraZ PF02381.18 gi|300711283|ref|YP_003737097.1| - 0.26 11.3 1.6 8 6.5 0.0 2.1 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like BPD_transp_1 PF00528.22 gi|300711284|ref|YP_003737098.1| - 1.7e-30 106.1 41.3 2.1e-16 60.2 13.2 3.3 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component Gluconate_2-dh3 PF13618.6 gi|300711285|ref|YP_003737099.1| - 7.9e-09 35.9 0.0 1e-08 35.5 0.0 1.1 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 TAT_signal PF10518.9 gi|300711285|ref|YP_003737099.1| - 0.043 13.7 3.5 0.087 12.7 3.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence GMC_oxred_C PF05199.13 gi|300711286|ref|YP_003737100.1| - 5.9e-24 85.2 0.2 2e-23 83.5 0.2 1.9 1 1 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 gi|300711286|ref|YP_003737100.1| - 5.8e-12 45.6 0.0 1.6e-11 44.2 0.0 1.7 1 1 0 1 1 1 1 GMC oxidoreductase DAO PF01266.24 gi|300711286|ref|YP_003737100.1| - 2.4e-08 33.9 5.9 0.0015 18.2 0.4 3.2 2 1 1 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300711286|ref|YP_003737100.1| - 1.4e-07 31.0 2.0 0.0042 16.2 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 gi|300711286|ref|YP_003737100.1| - 5e-07 29.3 0.6 0.00051 19.4 0.1 2.1 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|300711286|ref|YP_003737100.1| - 4.3e-06 25.7 0.6 0.00076 18.3 0.5 2.1 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|300711286|ref|YP_003737100.1| - 2.7e-05 24.3 0.2 7.8e-05 22.8 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|300711286|ref|YP_003737100.1| - 0.0002 20.7 0.0 0.005 16.1 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|300711286|ref|YP_003737100.1| - 0.0006 19.0 0.3 0.0009 18.4 0.3 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox PF00070.27 gi|300711286|ref|YP_003737100.1| - 0.035 14.7 0.1 1 9.9 0.0 2.5 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|300711286|ref|YP_003737100.1| - 0.051 13.8 0.0 1 9.7 0.0 2.5 2 1 0 2 2 2 0 TrkA-N domain Pyr_redox_3 PF13738.6 gi|300711286|ref|YP_003737100.1| - 0.058 12.6 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|300711286|ref|YP_003737100.1| - 0.059 13.3 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 gi|300711286|ref|YP_003737100.1| - 0.069 12.4 0.7 2.8 7.1 0.1 2.1 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase ApbA PF02558.16 gi|300711286|ref|YP_003737100.1| - 0.07 12.8 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Glycos_transf_2 PF00535.26 gi|300711287|ref|YP_003737101.1| - 5.7e-21 75.0 0.0 7.2e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300711287|ref|YP_003737101.1| - 5.5e-06 26.4 0.3 7e-06 26.1 0.3 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|300711287|ref|YP_003737101.1| - 0.2 12.2 0.0 0.4 11.2 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 PMT_2 PF13231.6 gi|300711288|ref|YP_003737102.1| - 8.3e-09 35.9 11.4 8.3e-09 35.9 11.4 3.0 4 0 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Glyco_transf_22 PF03901.17 gi|300711288|ref|YP_003737102.1| - 0.0039 16.5 0.7 0.0085 15.4 0.7 1.5 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family Wzy_C PF04932.15 gi|300711288|ref|YP_003737102.1| - 2.8 7.6 0.0 2.8 7.6 0.0 3.9 4 1 1 5 5 5 0 O-Antigen ligase SBP_bac_11 PF13531.6 gi|300711289|ref|YP_003737103.1| - 2.7e-12 46.9 0.5 7.2e-12 45.5 0.5 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|300711289|ref|YP_003737103.1| - 7.9e-09 35.3 0.0 3e-08 33.4 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|300711289|ref|YP_003737103.1| - 2.5e-06 27.7 0.9 1.2e-05 25.4 0.9 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|300711289|ref|YP_003737103.1| - 3.5e-06 27.0 0.0 9.2e-06 25.7 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein RGP PF03214.13 gi|300711290|ref|YP_003737104.1| - 1.6e-16 60.4 0.0 5e-16 58.8 0.0 1.7 2 0 0 2 2 2 1 Reversibly glycosylated polypeptide SicP-binding PF09119.10 gi|300711290|ref|YP_003737104.1| - 0.084 12.9 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 SicP binding ABC_tran PF00005.27 gi|300711291|ref|YP_003737105.1| - 2e-34 119.0 0.0 3.4e-34 118.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|300711291|ref|YP_003737105.1| - 2.6e-10 40.3 0.9 8.1e-10 38.7 0.9 1.9 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|300711291|ref|YP_003737105.1| - 1.7e-05 24.8 0.0 0.054 13.3 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|300711291|ref|YP_003737105.1| - 0.001 19.0 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|300711291|ref|YP_003737105.1| - 0.0026 18.1 0.1 0.0049 17.3 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|300711291|ref|YP_003737105.1| - 0.0051 17.1 0.2 0.017 15.4 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|300711291|ref|YP_003737105.1| - 0.0062 17.0 0.0 0.072 13.5 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|300711291|ref|YP_003737105.1| - 0.019 15.1 0.0 0.042 14.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|300711291|ref|YP_003737105.1| - 0.041 13.2 0.0 0.1 11.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin SbcCD_C PF13558.6 gi|300711291|ref|YP_003737105.1| - 0.045 14.0 0.4 0.4 10.9 0.4 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|300711291|ref|YP_003737105.1| - 0.086 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Fer2 PF00111.27 gi|300711292|ref|YP_003737106.1| - 9e-08 32.0 1.3 1.7e-07 31.1 1.3 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|300711292|ref|YP_003737106.1| - 0.00011 22.2 0.8 0.00034 20.6 0.8 1.8 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|300711292|ref|YP_003737106.1| - 0.0069 16.4 0.7 0.013 15.5 0.7 1.6 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain ADH_N PF08240.12 gi|300711293|ref|YP_003737107.1| - 2e-27 95.2 0.2 4.2e-27 94.2 0.2 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|300711293|ref|YP_003737107.1| - 2.7e-21 75.9 0.8 4e-21 75.3 0.1 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|300711293|ref|YP_003737107.1| - 2.2e-06 27.1 0.8 4e-06 26.3 0.8 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|300711293|ref|YP_003737107.1| - 0.0045 16.4 0.0 0.0071 15.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ADH_zinc_N_2 PF13602.6 gi|300711293|ref|YP_003737107.1| - 0.034 15.2 0.0 0.071 14.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase ELFV_dehydrog PF00208.21 gi|300711293|ref|YP_003737107.1| - 0.09 12.5 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HTH_32 PF13565.6 gi|300711294|ref|YP_003737108.1| - 1.1e-18 67.6 0.2 2.7e-18 66.4 0.1 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|300711294|ref|YP_003737108.1| - 1e-12 48.0 0.2 3.7e-12 46.2 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|300711294|ref|YP_003737108.1| - 2.4e-12 46.7 0.0 5.2e-12 45.6 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|300711294|ref|YP_003737108.1| - 5.8e-11 41.9 0.0 1.1e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain LZ_Tnp_IS481 PF13011.6 gi|300711294|ref|YP_003737108.1| - 9e-07 29.3 0.0 1.9e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_Tnp_1 PF01527.20 gi|300711294|ref|YP_003737108.1| - 2.1e-06 28.0 0.0 6.7e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 Transposase HTH_33 PF13592.6 gi|300711294|ref|YP_003737108.1| - 6.1e-06 25.8 0.1 2.7e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_psq PF05225.16 gi|300711294|ref|YP_003737108.1| - 0.0013 18.4 0.0 0.0036 17.0 0.0 1.7 2 0 0 2 2 2 1 helix-turn-helix, Psq domain HTH_Tnp_IS630 PF01710.16 gi|300711294|ref|YP_003737108.1| - 0.0022 18.0 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Transposase CENP-B_N PF04218.13 gi|300711294|ref|YP_003737108.1| - 0.0046 16.6 0.0 0.01 15.5 0.0 1.6 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_21 PF13276.6 gi|300711294|ref|YP_003737108.1| - 0.019 15.1 0.9 2.5 8.3 0.0 2.4 2 0 0 2 2 2 0 HTH-like domain MarR_2 PF12802.7 gi|300711294|ref|YP_003737108.1| - 0.049 13.5 0.1 0.21 11.5 0.0 2.0 2 0 0 2 2 2 0 MarR family Terminase_5 PF06056.12 gi|300711294|ref|YP_003737108.1| - 0.054 13.4 0.0 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_17 PF12728.7 gi|300711294|ref|YP_003737108.1| - 0.057 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|300711294|ref|YP_003737108.1| - 0.057 13.5 0.0 0.098 12.8 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_8 PF02954.19 gi|300711294|ref|YP_003737108.1| - 0.076 12.8 0.1 2.7 7.9 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family MerR_1 PF13411.6 gi|300711294|ref|YP_003737108.1| - 0.13 12.3 0.0 0.44 10.7 0.0 1.8 2 0 0 2 2 2 0 MerR HTH family regulatory protein AAA_23 PF13476.6 gi|300711295|ref|YP_003737109.1| - 3.3e-07 31.0 6.1 3.3e-07 31.0 6.1 4.1 1 1 0 2 2 1 1 AAA domain SMC_N PF02463.19 gi|300711295|ref|YP_003737109.1| - 4.7e-06 26.2 0.3 0.0043 16.5 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain CENP-F_leu_zip PF10473.9 gi|300711295|ref|YP_003737109.1| - 0.00016 21.7 5.5 0.00016 21.7 5.5 4.5 2 2 2 4 4 4 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_13 PF13166.6 gi|300711295|ref|YP_003737109.1| - 0.00074 18.3 28.4 0.0044 15.7 6.6 2.4 2 0 0 2 2 2 2 AAA domain TMF_TATA_bd PF12325.8 gi|300711295|ref|YP_003737109.1| - 0.0021 18.2 66.0 0.011 16.0 3.6 5.5 3 2 3 6 6 5 4 TATA element modulatory factor 1 TATA binding DUF4407 PF14362.6 gi|300711295|ref|YP_003737109.1| - 0.0049 16.3 41.6 0.034 13.5 18.7 2.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4407) Spc7 PF08317.11 gi|300711295|ref|YP_003737109.1| - 0.045 12.6 55.5 0.29 10.0 18.0 3.9 2 2 1 3 3 3 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 gi|300711295|ref|YP_003737109.1| - 0.047 13.9 39.9 0.05 13.8 3.6 4.9 4 1 1 5 5 4 0 Seryl-tRNA synthetase N-terminal domain Atg14 PF10186.9 gi|300711295|ref|YP_003737109.1| - 0.059 12.5 39.3 0.023 13.8 7.1 4.1 2 2 2 4 4 4 0 Vacuolar sorting 38 and autophagy-related subunit 14 Baculo_PEP_C PF04513.12 gi|300711295|ref|YP_003737109.1| - 0.21 11.6 16.1 4.5 7.3 2.5 4.6 3 1 1 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3801 PF12687.7 gi|300711295|ref|YP_003737109.1| - 0.28 11.2 0.0 0.28 11.2 0.0 3.2 1 1 1 2 2 1 0 Protein of unknown function (DUF3801) NPV_P10 PF05531.12 gi|300711295|ref|YP_003737109.1| - 0.69 10.4 18.9 16 6.0 1.1 5.7 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 gi|300711295|ref|YP_003737109.1| - 0.7 10.2 28.2 0.47 10.8 1.1 5.4 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 zf-CpG_bind_C PF12269.8 gi|300711295|ref|YP_003737109.1| - 0.71 9.6 0.0 0.71 9.6 0.0 4.2 1 1 4 5 5 5 0 CpG binding protein zinc finger C terminal domain DHR10 PF18595.1 gi|300711295|ref|YP_003737109.1| - 1.7 8.7 71.2 0.052 13.6 13.3 5.1 2 2 2 4 4 3 0 Designed helical repeat protein 10 domain GAS PF13851.6 gi|300711295|ref|YP_003737109.1| - 1.8 7.9 45.0 2.3 7.5 10.0 3.9 2 2 2 4 4 4 0 Growth-arrest specific micro-tubule binding APG6_N PF17675.1 gi|300711295|ref|YP_003737109.1| - 2.5 8.6 75.0 6.9 7.2 24.4 5.0 2 2 2 4 4 4 0 Apg6 coiled-coil region HemX PF04375.14 gi|300711295|ref|YP_003737109.1| - 2.6 7.3 28.7 3.9 6.7 3.4 4.1 2 2 2 4 4 4 0 HemX, putative uroporphyrinogen-III C-methyltransferase Macoilin PF09726.9 gi|300711295|ref|YP_003737109.1| - 3.9 5.9 27.7 1.3 7.5 13.0 2.4 2 0 0 2 2 2 0 Macoilin family AAA_15 PF13175.6 gi|300711295|ref|YP_003737109.1| - 6.2 6.4 10.0 5.8e+02 -0.1 10.0 3.5 1 1 0 1 1 1 0 AAA ATPase domain EzrA PF06160.12 gi|300711295|ref|YP_003737109.1| - 8.4 4.4 37.7 0.45 8.6 6.9 2.6 2 1 0 2 2 2 0 Septation ring formation regulator, EzrA Sgf11 PF08209.11 gi|300711296|ref|YP_003737110.1| - 0.03 13.9 0.1 0.056 13.0 0.1 1.4 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) MR_MLE_C PF13378.6 gi|300711297|ref|YP_003737111.1| - 4.3e-64 216.1 0.4 6.4e-64 215.5 0.4 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300711297|ref|YP_003737111.1| - 1.1e-27 96.5 0.0 2.1e-27 95.6 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF1485 PF07364.12 gi|300711297|ref|YP_003737111.1| - 0.11 11.8 0.1 0.23 10.7 0.1 1.5 2 0 0 2 2 2 0 Metallopeptidase family M81 Glyoxalase PF00903.25 gi|300711298|ref|YP_003737112.1| - 3.5e-16 59.6 0.1 4.1e-16 59.3 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300711298|ref|YP_003737112.1| - 6.2e-13 49.0 0.0 7.3e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|300711298|ref|YP_003737112.1| - 1.5e-06 28.2 0.0 3.9e-05 23.6 0.0 2.1 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|300711298|ref|YP_003737112.1| - 7.8e-05 23.4 0.1 0.00013 22.7 0.1 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|300711298|ref|YP_003737112.1| - 8.6e-05 22.7 0.1 0.00013 22.2 0.1 1.3 1 1 0 1 1 1 1 Glyoxalase-like domain TFIIE_beta PF02186.15 gi|300711300|ref|YP_003737114.1| - 0.025 14.9 0.1 0.046 14.0 0.1 1.4 1 0 0 1 1 1 0 TFIIE beta subunit core domain SEN1_N PF12726.7 gi|300711300|ref|YP_003737114.1| - 0.043 12.0 0.0 0.05 11.8 0.0 1.0 1 0 0 1 1 1 0 SEN1 N terminal DUF2716 PF10898.8 gi|300711300|ref|YP_003737114.1| - 0.075 13.4 0.1 0.097 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2716) Phage_integrase PF00589.22 gi|300711302|ref|YP_003737116.1| - 0.0002 21.2 0.1 0.00025 20.9 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Phage_integr_3 PF16795.5 gi|300711302|ref|YP_003737116.1| - 0.018 15.0 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Archaeal phage integrase IclR PF01614.18 gi|300711303|ref|YP_003737117.1| - 4.6e-37 126.7 0.0 1.2e-36 125.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 gi|300711303|ref|YP_003737117.1| - 1.3e-10 40.9 0.2 4.5e-10 39.2 0.1 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|300711303|ref|YP_003737117.1| - 1.3e-05 25.0 0.0 2.3e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|300711303|ref|YP_003737117.1| - 0.00028 20.8 0.0 0.0013 18.6 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|300711303|ref|YP_003737117.1| - 0.0004 19.9 0.0 0.00077 19.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300711303|ref|YP_003737117.1| - 0.00053 19.8 0.0 0.0017 18.2 0.0 1.9 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300711303|ref|YP_003737117.1| - 0.00094 19.2 0.2 0.0035 17.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300711303|ref|YP_003737117.1| - 0.0015 18.6 0.0 0.0035 17.5 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|300711303|ref|YP_003737117.1| - 0.002 17.9 0.0 0.0046 16.8 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GAF PF01590.26 gi|300711303|ref|YP_003737117.1| - 0.0027 18.3 0.0 0.006 17.2 0.0 1.7 1 1 1 2 2 2 1 GAF domain SpoVT_C PF15714.5 gi|300711303|ref|YP_003737117.1| - 0.0061 16.6 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Stage V sporulation protein T C-terminal, transcription factor Haem_degrading PF03928.14 gi|300711303|ref|YP_003737117.1| - 0.014 15.4 0.2 0.05 13.7 0.2 1.8 1 1 0 1 1 1 0 Haem-degrading PocR PF10114.9 gi|300711303|ref|YP_003737117.1| - 0.032 14.0 0.1 0.78 9.5 0.0 2.3 2 0 0 2 2 2 0 Sensory domain found in PocR HTH_23 PF13384.6 gi|300711303|ref|YP_003737117.1| - 0.081 12.8 0.0 0.26 11.1 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HpcH_HpaI PF03328.14 gi|300711304|ref|YP_003737118.1| - 1.3e-40 138.9 0.0 3.3e-40 137.6 0.0 1.6 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|300711304|ref|YP_003737118.1| - 1.4e-07 31.0 0.0 1.2e-05 24.6 0.1 2.3 2 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold Malate_synthase PF01274.22 gi|300711304|ref|YP_003737118.1| - 0.0032 15.8 0.1 2 6.6 0.0 3.1 3 0 0 3 3 3 3 Malate synthase Glyoxalase PF00903.25 gi|300711305|ref|YP_003737119.1| - 2.1e-12 47.3 0.4 2.5e-12 47.1 0.4 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300711305|ref|YP_003737119.1| - 1.4e-07 31.7 0.4 5.1e-07 29.9 0.4 1.7 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300711305|ref|YP_003737119.1| - 0.00024 21.9 1.6 0.0003 21.5 1.6 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|300711305|ref|YP_003737119.1| - 0.0014 18.7 0.1 0.15 12.2 0.1 2.1 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 gi|300711305|ref|YP_003737119.1| - 0.099 12.6 0.0 0.19 11.7 0.0 1.7 1 1 0 1 1 1 0 Glyoxalase-like domain Acetyltransf_7 PF13508.7 gi|300711305|ref|YP_003737119.1| - 0.14 12.6 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FAD-oxidase_C PF02913.19 gi|300711306|ref|YP_003737120.1| - 2.3e-58 197.8 0.1 2.3e-58 197.8 0.1 1.8 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|300711306|ref|YP_003737120.1| - 1.8e-36 124.9 0.1 3.5e-36 124.0 0.1 1.5 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|300711306|ref|YP_003737120.1| - 2.9e-10 40.6 5.7 6e-10 39.5 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|300711306|ref|YP_003737120.1| - 3.1e-10 40.4 6.0 6.9e-10 39.2 6.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|300711306|ref|YP_003737120.1| - 1.4e-08 34.8 0.4 0.0017 18.6 0.0 3.3 4 0 0 4 4 4 2 Cysteine-rich domain Fer4_10 PF13237.6 gi|300711306|ref|YP_003737120.1| - 0.0013 18.8 8.3 0.069 13.3 1.2 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|300711306|ref|YP_003737120.1| - 0.0032 18.0 6.1 0.0081 16.7 6.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300711306|ref|YP_003737120.1| - 0.007 16.5 7.2 0.041 14.1 7.6 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Terpene_synth_C PF03936.16 gi|300711306|ref|YP_003737120.1| - 0.018 14.4 0.1 0.036 13.4 0.1 1.4 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain Fer4 PF00037.27 gi|300711306|ref|YP_003737120.1| - 0.021 14.6 12.4 0.25 11.2 4.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|300711306|ref|YP_003737120.1| - 0.041 14.0 11.6 0.26 11.5 1.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|300711306|ref|YP_003737120.1| - 0.11 12.6 1.4 0.29 11.3 0.4 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|300711306|ref|YP_003737120.1| - 0.12 13.0 12.9 0.2 12.2 2.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|300711306|ref|YP_003737120.1| - 0.13 12.4 8.6 0.098 12.8 0.4 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain Cytokin-bind PF09265.10 gi|300711306|ref|YP_003737120.1| - 0.21 11.0 0.1 0.36 10.2 0.1 1.3 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Fer4_6 PF12837.7 gi|300711306|ref|YP_003737120.1| - 3 8.1 13.0 1.3 9.3 3.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Lactate_perm PF02652.14 gi|300711307|ref|YP_003737121.1| - 2.1e-96 323.8 42.6 8.9e-96 321.7 42.6 1.9 1 1 0 1 1 1 1 L-lactate permease PTA_PTB PF01515.19 gi|300711309|ref|YP_003737123.1| - 1.3e-94 317.2 0.0 1.9e-94 316.6 0.0 1.3 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 gi|300711309|ref|YP_003737123.1| - 1.2e-28 100.1 0.1 2.3e-26 92.7 0.1 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|300711309|ref|YP_003737123.1| - 6.6e-23 81.3 0.5 1.8e-22 79.9 0.5 1.7 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain Acyl-CoA_dh_C PF12806.7 gi|300711309|ref|YP_003737123.1| - 0.086 13.0 1.1 0.89 9.7 0.2 2.4 2 0 0 2 2 2 0 Acetyl-CoA dehydrogenase C-terminal like Csm4_C PF17953.1 gi|300711309|ref|YP_003737123.1| - 0.19 11.6 0.0 0.75 9.7 0.0 1.9 2 0 0 2 2 2 0 CRISPR Csm4 C-terminal domain MFS_1 PF07690.16 gi|300711310|ref|YP_003737124.1| - 1.2e-30 106.7 72.8 4.7e-30 104.7 39.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily 2-Hacid_dh_C PF02826.19 gi|300711311|ref|YP_003737125.1| - 2.2e-49 167.2 0.0 3.9e-49 166.4 0.0 1.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300711311|ref|YP_003737125.1| - 7.1e-08 32.2 0.0 9.8e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|300711311|ref|YP_003737125.1| - 0.0012 19.0 0.0 0.002 18.3 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|300711311|ref|YP_003737125.1| - 0.037 14.6 0.0 0.062 13.9 0.0 1.3 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|300711311|ref|YP_003737125.1| - 0.12 12.3 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TPP_enzyme_N PF02776.18 gi|300711312|ref|YP_003737126.1| - 4.4e-37 127.3 0.0 1e-33 116.4 0.0 2.4 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|300711312|ref|YP_003737126.1| - 5.8e-35 120.0 0.0 9.9e-35 119.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|300711312|ref|YP_003737126.1| - 9.2e-21 74.2 0.0 6.8e-19 68.2 0.0 3.1 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain P4Ha_N PF08336.11 gi|300711312|ref|YP_003737126.1| - 0.048 13.7 0.0 0.24 11.4 0.0 2.0 2 0 0 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region ETF_alpha PF00766.19 gi|300711312|ref|YP_003737126.1| - 0.063 13.3 0.0 0.17 11.9 0.0 1.7 1 0 0 1 1 1 0 Electron transfer flavoprotein FAD-binding domain PNTB PF02233.16 gi|300711312|ref|YP_003737126.1| - 0.15 10.9 0.0 0.24 10.3 0.0 1.2 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit CoA_transf_3 PF02515.17 gi|300711313|ref|YP_003737127.1| - 1.4e-123 412.7 0.0 1.7e-123 412.4 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III FAD-oxidase_C PF02913.19 gi|300711314|ref|YP_003737128.1| - 2.9e-63 213.8 0.0 1.5e-62 211.5 0.0 2.1 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|300711314|ref|YP_003737128.1| - 1.2e-38 131.9 0.1 2.8e-38 130.8 0.1 1.6 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|300711314|ref|YP_003737128.1| - 2e-10 41.0 4.4 4.2e-10 40.0 4.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|300711314|ref|YP_003737128.1| - 2.4e-09 37.5 5.3 5.2e-09 36.4 5.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|300711314|ref|YP_003737128.1| - 2.6e-06 27.5 0.0 0.00018 21.6 0.0 2.7 2 0 0 2 2 2 1 Cysteine-rich domain Fer4_10 PF13237.6 gi|300711314|ref|YP_003737128.1| - 0.00034 20.7 3.7 0.056 13.6 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300711314|ref|YP_003737128.1| - 0.0023 18.1 2.2 0.1 12.8 0.5 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Cytokin-bind PF09265.10 gi|300711314|ref|YP_003737128.1| - 0.014 14.8 0.1 0.024 14.0 0.1 1.3 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Fer4_21 PF14697.6 gi|300711314|ref|YP_003737128.1| - 0.026 14.7 3.0 0.096 12.8 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain DUF3567 PF12091.8 gi|300711314|ref|YP_003737128.1| - 0.13 12.4 0.1 0.36 11.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3567) Fer4_7 PF12838.7 gi|300711314|ref|YP_003737128.1| - 0.21 12.2 8.5 1.9 9.2 8.8 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300711314|ref|YP_003737128.1| - 0.81 9.6 14.7 0.43 10.5 4.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300711314|ref|YP_003737128.1| - 1.8 9.2 11.1 0.44 11.2 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|300711314|ref|YP_003737128.1| - 6.2 7.1 12.5 0.91 9.7 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain CoA_transf_3 PF02515.17 gi|300711315|ref|YP_003737129.1| - 7.4e-119 397.1 0.0 8.5e-119 396.9 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III ECH_1 PF00378.20 gi|300711316|ref|YP_003737130.1| - 2.2e-59 200.8 0.4 2.4e-59 200.7 0.4 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|300711316|ref|YP_003737130.1| - 1e-31 110.7 0.1 1.1e-31 110.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ABC_sub_bind PF04392.12 gi|300711316|ref|YP_003737130.1| - 0.11 11.7 0.1 0.19 10.9 0.1 1.4 1 0 0 1 1 1 0 ABC transporter substrate binding protein Iso_dh PF00180.20 gi|300711317|ref|YP_003737131.1| - 5.6e-86 288.8 0.0 6.3e-86 288.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Usp PF00582.26 gi|300711318|ref|YP_003737132.1| - 6.7e-19 68.8 4.8 7.8e-19 68.6 4.8 1.1 1 0 0 1 1 1 1 Universal stress protein family TctC PF03401.14 gi|300711319|ref|YP_003737133.1| - 6.9e-21 74.5 0.0 1.2e-20 73.7 0.0 1.3 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor TctB PF07331.11 gi|300711320|ref|YP_003737134.1| - 3.8e-07 30.5 11.5 7.7e-07 29.5 11.5 1.5 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Sensor PF13796.6 gi|300711320|ref|YP_003737134.1| - 0.41 10.7 12.2 0.46 10.5 2.7 2.1 2 0 0 2 2 2 0 Putative sensor DUF2157 PF09925.9 gi|300711320|ref|YP_003737134.1| - 8.7 6.1 10.3 8.4 6.2 5.4 2.2 1 1 0 2 2 2 0 Predicted membrane protein (DUF2157) TctA PF01970.16 gi|300711321|ref|YP_003737135.1| - 4.1e-127 424.3 50.3 4.9e-127 424.1 50.3 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family Glyoxalase PF00903.25 gi|300711322|ref|YP_003737136.1| - 4.6e-12 46.2 0.0 6.2e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|300711322|ref|YP_003737136.1| - 0.00029 21.0 0.2 0.0017 18.5 0.2 1.9 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 gi|300711322|ref|YP_003737136.1| - 0.0012 19.1 0.0 0.0021 18.3 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|300711322|ref|YP_003737136.1| - 0.013 15.4 0.0 0.027 14.4 0.0 1.5 1 1 0 1 1 1 0 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|300711322|ref|YP_003737136.1| - 0.045 14.5 0.1 0.28 12.0 0.1 2.1 1 1 0 1 1 1 0 Glyoxalase-like domain Cupin_2 PF07883.11 gi|300711323|ref|YP_003737137.1| - 5.9e-09 35.5 0.3 8.1e-09 35.1 0.3 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|300711323|ref|YP_003737137.1| - 0.005 16.4 0.0 0.0063 16.1 0.0 1.3 1 0 0 1 1 1 1 Cupin Ectoine_synth PF06339.12 gi|300711323|ref|YP_003737137.1| - 0.0065 16.7 0.0 0.0085 16.3 0.0 1.2 1 0 0 1 1 1 1 Ectoine synthase YHYH PF14240.6 gi|300711323|ref|YP_003737137.1| - 0.012 15.6 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 YHYH protein Cupin_3 PF05899.12 gi|300711323|ref|YP_003737137.1| - 0.016 14.9 0.1 0.028 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|300711323|ref|YP_003737137.1| - 0.022 14.7 0.0 0.028 14.3 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase FAD-oxidase_C PF02913.19 gi|300711324|ref|YP_003737138.1| - 1.5e-62 211.5 0.3 7.2e-62 209.3 0.2 2.0 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|300711324|ref|YP_003737138.1| - 3.3e-41 140.3 0.4 6.2e-41 139.4 0.4 1.5 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|300711324|ref|YP_003737138.1| - 1.1e-09 38.6 3.6 2.3e-09 37.7 3.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|300711324|ref|YP_003737138.1| - 2.1e-08 34.5 4.5 4.8e-08 33.3 4.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|300711324|ref|YP_003737138.1| - 3e-06 27.4 0.0 3.8e-05 23.8 0.0 2.6 2 0 0 2 2 2 1 Cysteine-rich domain Fer4_9 PF13187.6 gi|300711324|ref|YP_003737138.1| - 0.00062 19.9 1.6 0.029 14.5 0.4 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300711324|ref|YP_003737138.1| - 0.0062 16.6 7.9 0.024 14.8 2.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|300711324|ref|YP_003737138.1| - 0.0094 16.1 2.0 0.12 12.5 0.4 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Cytokin-bind PF09265.10 gi|300711324|ref|YP_003737138.1| - 0.066 12.6 0.0 0.099 12.0 0.0 1.2 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Fer4 PF00037.27 gi|300711324|ref|YP_003737138.1| - 0.3 11.0 15.0 0.068 13.0 4.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|300711324|ref|YP_003737138.1| - 0.31 11.7 8.4 2.6 8.7 8.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300711324|ref|YP_003737138.1| - 1.5 9.1 11.4 0.17 12.0 2.4 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300711324|ref|YP_003737138.1| - 7.1 7.4 11.3 0.85 10.3 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain CENP-F_leu_zip PF10473.9 gi|300711326|ref|YP_003737140.1| - 0.00063 19.8 0.0 0.31 11.0 0.1 2.5 2 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ALIX_LYPXL_bnd PF13949.6 gi|300711326|ref|YP_003737140.1| - 0.0017 17.8 0.2 0.0024 17.2 0.2 1.3 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV NPV_P10 PF05531.12 gi|300711326|ref|YP_003737140.1| - 0.0047 17.4 1.3 0.044 14.3 0.3 2.6 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 gi|300711326|ref|YP_003737140.1| - 0.027 14.8 0.2 0.46 10.8 0.1 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CHIP_TPR_N PF18391.1 gi|300711326|ref|YP_003737140.1| - 0.038 14.8 0.2 0.13 13.1 0.2 2.0 1 1 0 1 1 1 0 CHIP N-terminal tetratricopeptide repeat domain TolA_bind_tri PF16331.5 gi|300711326|ref|YP_003737140.1| - 0.052 13.6 0.7 7.1 6.8 0.0 3.1 2 1 1 3 3 3 0 TolA binding protein trimerisation ABC_tran_CTD PF16326.5 gi|300711326|ref|YP_003737140.1| - 0.073 13.3 4.5 1.2 9.5 0.1 3.1 1 1 2 3 3 3 0 ABC transporter C-terminal domain MtrB PF05440.12 gi|300711326|ref|YP_003737140.1| - 0.094 13.1 0.1 15 6.0 0.1 3.0 2 1 0 3 3 2 0 Tetrahydromethanopterin S-methyltransferase subunit B TPR_MLP1_2 PF07926.12 gi|300711326|ref|YP_003737140.1| - 0.12 12.4 0.6 0.96 9.5 0.3 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 gi|300711326|ref|YP_003737140.1| - 0.13 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) IMD PF08397.11 gi|300711326|ref|YP_003737140.1| - 0.15 11.4 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 IRSp53/MIM homology domain THOC7 PF05615.13 gi|300711326|ref|YP_003737140.1| - 0.15 12.3 0.5 0.25 11.6 0.5 1.4 1 0 0 1 1 1 0 Tho complex subunit 7 Phage_GP20 PF06810.11 gi|300711326|ref|YP_003737140.1| - 0.23 11.2 0.6 5.2 6.9 0.0 2.2 1 1 1 2 2 2 0 Phage minor structural protein GP20 Baculo_PEP_C PF04513.12 gi|300711326|ref|YP_003737140.1| - 0.24 11.5 0.0 1.2 9.2 0.0 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus LPP PF04728.13 gi|300711326|ref|YP_003737140.1| - 0.34 11.3 1.9 38 4.8 0.5 3.3 3 1 0 3 3 3 0 Lipoprotein leucine-zipper DUF4164 PF13747.6 gi|300711326|ref|YP_003737140.1| - 0.36 11.1 6.0 0.16 12.2 1.2 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) T7SS_ESX_EspC PF10824.8 gi|300711326|ref|YP_003737140.1| - 0.7 10.4 5.3 0.28 11.7 0.7 2.3 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm FUSC PF04632.12 gi|300711326|ref|YP_003737140.1| - 1.1 7.7 8.6 2.5 6.5 8.7 1.5 1 1 0 1 1 1 0 Fusaric acid resistance protein family Lactamase_B_2 PF12706.7 gi|300711327|ref|YP_003737141.1| - 1e-14 54.5 0.7 1.3e-14 54.2 0.7 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|300711327|ref|YP_003737141.1| - 1.1e-08 35.1 0.1 1.3e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|300711327|ref|YP_003737141.1| - 0.47 10.4 9.7 1.3 9.0 9.7 1.9 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily Com_YlbF PF06133.11 gi|300711328|ref|YP_003737142.1| - 9.2e-24 84.1 8.4 1e-23 83.9 8.4 1.0 1 0 0 1 1 1 1 Control of competence regulator ComK, YlbF/YmcA DUF3080 PF11279.8 gi|300711328|ref|YP_003737142.1| - 0.001 18.4 3.0 0.0011 18.3 3.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3080) Alpha-2-MRAP_C PF06401.11 gi|300711328|ref|YP_003737142.1| - 0.0062 16.5 1.6 0.0078 16.2 1.6 1.1 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain FUSC PF04632.12 gi|300711328|ref|YP_003737142.1| - 0.062 11.8 4.5 0.066 11.8 4.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family UPF0242 PF06785.11 gi|300711328|ref|YP_003737142.1| - 0.28 11.3 6.2 0.31 11.1 6.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ATP-synt_DE PF00401.20 gi|300711328|ref|YP_003737142.1| - 5.8 7.3 11.0 4.3 7.7 1.4 2.9 3 1 0 3 3 3 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TrkH PF02386.16 gi|300711329|ref|YP_003737143.1| - 3.5e-71 240.2 15.4 2.4e-70 237.4 15.4 2.0 1 1 0 1 1 1 1 Cation transport protein TrkA_N PF02254.18 gi|300711331|ref|YP_003737145.1| - 4.6e-28 97.8 0.3 8.1e-28 97.0 0.3 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|300711331|ref|YP_003737145.1| - 2.9e-14 52.7 1.3 4.9e-14 51.9 0.1 1.9 2 0 0 2 2 2 1 TrkA-C domain 3HCDH_N PF02737.18 gi|300711331|ref|YP_003737145.1| - 3.2e-05 23.9 0.1 7.1e-05 22.8 0.0 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|300711331|ref|YP_003737145.1| - 3.4e-05 24.3 0.0 5.4e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 XdhC Rossmann domain Sacchrp_dh_NADP PF03435.18 gi|300711331|ref|YP_003737145.1| - 5.1e-05 23.5 0.1 7.6e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|300711331|ref|YP_003737145.1| - 0.00018 22.0 0.1 0.00048 20.7 0.1 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Epimerase PF01370.21 gi|300711331|ref|YP_003737145.1| - 0.0012 18.4 0.1 0.0019 17.7 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|300711331|ref|YP_003737145.1| - 0.0019 18.1 0.6 0.0036 17.2 0.5 1.6 1 1 1 2 2 2 1 NAD(P)H-binding NAD_binding_7 PF13241.6 gi|300711331|ref|YP_003737145.1| - 0.002 18.5 0.1 0.0037 17.7 0.1 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding NmrA PF05368.13 gi|300711331|ref|YP_003737145.1| - 0.0028 17.2 0.1 0.0044 16.6 0.1 1.3 1 0 0 1 1 1 1 NmrA-like family Shikimate_DH PF01488.20 gi|300711331|ref|YP_003737145.1| - 0.003 17.6 0.1 0.007 16.4 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase adh_short PF00106.25 gi|300711331|ref|YP_003737145.1| - 0.0066 15.9 0.5 0.019 14.4 0.2 1.8 2 0 0 2 2 2 1 short chain dehydrogenase ADH_zinc_N PF00107.26 gi|300711331|ref|YP_003737145.1| - 0.0098 15.9 0.1 1.4 8.9 0.0 2.4 2 1 0 2 2 2 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|300711331|ref|YP_003737145.1| - 0.01 15.4 0.0 0.014 15.0 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFO_IDH_MocA PF01408.22 gi|300711331|ref|YP_003737145.1| - 0.011 16.6 0.0 0.016 16.0 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ApbA PF02558.16 gi|300711331|ref|YP_003737145.1| - 0.011 15.4 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 gi|300711331|ref|YP_003737145.1| - 0.012 15.0 0.0 0.071 12.5 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|300711331|ref|YP_003737145.1| - 0.015 14.6 0.2 0.027 13.8 0.2 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 gi|300711331|ref|YP_003737145.1| - 0.029 14.5 0.1 0.079 13.1 0.0 1.7 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase adh_short_C2 PF13561.6 gi|300711331|ref|YP_003737145.1| - 0.045 13.3 0.6 0.12 11.9 0.5 1.7 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase ATPgrasp_N PF18130.1 gi|300711331|ref|YP_003737145.1| - 0.084 13.4 0.2 0.19 12.3 0.2 1.6 1 0 0 1 1 1 0 ATP-grasp N-terminal domain SIS_2 PF13580.6 gi|300711331|ref|YP_003737145.1| - 0.12 12.4 0.0 0.66 10.0 0.0 2.2 2 1 1 3 3 3 0 SIS domain ThiF PF00899.21 gi|300711331|ref|YP_003737145.1| - 0.17 11.2 0.1 0.33 10.3 0.1 1.4 1 0 0 1 1 1 0 ThiF family Diphthamide_syn PF01866.17 gi|300711332|ref|YP_003737146.1| - 1.8e-78 264.0 0.0 2.3e-78 263.7 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein GTP-bdg_N PF13167.6 gi|300711332|ref|YP_003737146.1| - 0.0039 17.8 0.0 0.32 11.7 0.0 2.7 2 1 0 3 3 3 1 GTP-binding GTPase N-terminal Fe-ADH_2 PF13685.6 gi|300711332|ref|YP_003737146.1| - 0.033 13.9 0.0 0.059 13.1 0.0 1.4 1 1 0 1 1 1 0 Iron-containing alcohol dehydrogenase CCB1 PF12046.8 gi|300711332|ref|YP_003737146.1| - 0.18 11.1 0.0 0.3 10.4 0.0 1.3 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B UCR_Fe-S_N PF10399.9 gi|300711333|ref|YP_003737147.1| - 0.074 12.4 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Abhydrolase_3 PF07859.13 gi|300711334|ref|YP_003737148.1| - 3.3e-78 262.4 0.5 4.3e-78 262.0 0.5 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|300711334|ref|YP_003737148.1| - 3.1e-09 36.2 0.0 1e-08 34.5 0.0 1.6 1 1 0 1 1 1 1 Carboxylesterase family Say1_Mug180 PF10340.9 gi|300711334|ref|YP_003737148.1| - 0.00039 19.4 0.0 0.00055 18.9 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase Peptidase_S9 PF00326.21 gi|300711334|ref|YP_003737148.1| - 0.0037 16.8 0.0 0.032 13.7 0.0 2.0 2 0 0 2 2 2 1 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 gi|300711334|ref|YP_003737148.1| - 0.042 12.7 0.0 0.062 12.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme DUF2974 PF11187.8 gi|300711334|ref|YP_003737148.1| - 0.046 13.3 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) AXE1 PF05448.12 gi|300711334|ref|YP_003737148.1| - 0.065 11.9 0.0 0.26 9.9 0.0 1.8 2 0 0 2 2 2 0 Acetyl xylan esterase (AXE1) Chlorophyllase PF07224.11 gi|300711334|ref|YP_003737148.1| - 0.11 11.5 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase MreB_Mbl PF06723.13 gi|300711335|ref|YP_003737149.1| - 0.13 11.0 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein AP_endonuc_2 PF01261.24 gi|300711336|ref|YP_003737150.1| - 7e-06 25.6 0.2 8.7e-06 25.3 0.2 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvrA_inter PF17760.1 gi|300711336|ref|YP_003737150.1| - 0.072 13.2 0.0 0.14 12.2 0.0 1.5 1 1 0 1 1 1 0 UvrA interaction domain MTS PF05175.14 gi|300711337|ref|YP_003737151.1| - 3.4e-10 39.7 0.0 5.4e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|300711337|ref|YP_003737151.1| - 3.1e-09 36.7 0.1 4.3e-09 36.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|300711337|ref|YP_003737151.1| - 7.8e-08 32.3 0.0 1.2e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300711337|ref|YP_003737151.1| - 1.7e-07 31.8 0.0 4.1e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711337|ref|YP_003737151.1| - 1.2e-05 25.8 0.1 3.6e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300711337|ref|YP_003737151.1| - 0.00043 20.2 0.0 0.00044 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|300711337|ref|YP_003737151.1| - 0.0014 18.4 0.0 0.0029 17.3 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_32 PF13679.6 gi|300711337|ref|YP_003737151.1| - 0.0025 17.8 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|300711337|ref|YP_003737151.1| - 0.0077 15.9 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.12 gi|300711337|ref|YP_003737151.1| - 0.0098 16.6 0.0 0.018 15.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|300711337|ref|YP_003737151.1| - 0.018 14.8 0.0 0.054 13.2 0.0 1.6 2 0 0 2 2 2 0 Met-10+ like-protein PCMT PF01135.19 gi|300711337|ref|YP_003737151.1| - 0.06 13.1 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Rhomboid PF01694.22 gi|300711338|ref|YP_003737152.1| - 7.4e-11 42.3 11.9 7.4e-11 42.3 11.9 3.1 2 1 0 2 2 2 1 Rhomboid family Flavi_M PF01004.19 gi|300711338|ref|YP_003737152.1| - 0.013 15.3 0.9 0.04 13.7 0.9 1.8 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M DUF543 PF04418.12 gi|300711338|ref|YP_003737152.1| - 0.017 15.1 0.2 0.065 13.2 0.2 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF543) RNA_pol_L_2 PF13656.6 gi|300711339|ref|YP_003737153.1| - 7.8e-16 57.6 0.0 9.1e-16 57.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|300711339|ref|YP_003737153.1| - 5.3e-06 25.8 0.0 9.6e-06 24.9 0.0 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Halo_GVPC PF05465.13 gi|300711339|ref|YP_003737153.1| - 0.96 9.8 8.5 3.5 8.0 8.5 1.8 1 1 0 1 1 1 0 Halobacterial gas vesicle protein C (GVPC) repeat His_biosynth PF00977.21 gi|300711340|ref|YP_003737154.1| - 1.5e-81 273.2 0.2 1.7e-81 273.0 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|300711340|ref|YP_003737154.1| - 4.1e-07 29.4 0.0 3e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|300711340|ref|YP_003737154.1| - 6.4e-06 25.8 0.6 0.00031 20.2 0.0 2.1 2 0 0 2 2 2 1 Nitronate monooxygenase ThiG PF05690.14 gi|300711340|ref|YP_003737154.1| - 1.1e-05 24.9 0.1 0.0016 17.8 0.0 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.12 gi|300711340|ref|YP_003737154.1| - 0.00034 20.1 0.1 0.00072 19.0 0.0 1.5 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator TMP-TENI PF02581.17 gi|300711340|ref|YP_003737154.1| - 0.003 16.9 0.3 0.14 11.5 0.0 2.2 2 0 0 2 2 2 1 Thiamine monophosphate synthase PcrB PF01884.17 gi|300711340|ref|YP_003737154.1| - 0.0085 15.6 0.1 0.015 14.8 0.1 1.4 1 0 0 1 1 1 1 PcrB family IMPDH PF00478.25 gi|300711340|ref|YP_003737154.1| - 0.02 13.9 0.1 0.032 13.2 0.1 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|300711340|ref|YP_003737154.1| - 0.04 13.1 0.0 0.077 12.2 0.0 1.4 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase DUF561 PF04481.12 gi|300711340|ref|YP_003737154.1| - 0.15 11.2 0.1 8.2 5.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF561) IGPS PF00218.21 gi|300711340|ref|YP_003737154.1| - 0.16 11.1 0.0 0.49 9.5 0.0 1.7 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase ThuA PF06283.11 gi|300711342|ref|YP_003737156.1| - 2.1e-34 119.6 0.1 2.5e-34 119.3 0.1 1.1 1 0 0 1 1 1 1 Trehalose utilisation UDG PF03167.19 gi|300711343|ref|YP_003737157.1| - 3.2e-12 46.7 0.0 3.8e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF4918 PF16265.5 gi|300711343|ref|YP_003737157.1| - 0.17 11.4 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) Copper-bind PF00127.20 gi|300711344|ref|YP_003737158.1| - 1e-10 42.0 0.0 4.6e-10 39.8 0.0 1.9 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TAT_signal PF10518.9 gi|300711344|ref|YP_003737158.1| - 0.023 14.5 2.5 0.045 13.6 2.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Cupin_2 PF07883.11 gi|300711345|ref|YP_003737159.1| - 3.3e-12 45.9 0.5 4.8e-12 45.4 0.5 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|300711345|ref|YP_003737159.1| - 1e-05 25.1 0.1 1.6e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 gi|300711345|ref|YP_003737159.1| - 0.00062 19.6 0.0 0.00077 19.3 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ MannoseP_isomer PF01050.18 gi|300711345|ref|YP_003737159.1| - 0.0012 18.7 0.0 0.0015 18.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding_2 PF14525.6 gi|300711345|ref|YP_003737159.1| - 0.0047 16.6 0.0 0.0051 16.5 0.0 1.1 1 0 0 1 1 1 1 AraC-binding-like domain KduI PF04962.12 gi|300711345|ref|YP_003737159.1| - 0.032 13.6 0.0 0.039 13.3 0.0 1.2 1 0 0 1 1 1 0 KduI/IolB family CENP-C_C PF11699.8 gi|300711345|ref|YP_003737159.1| - 0.086 13.1 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Mif2/CENP-C like SlyX PF04102.12 gi|300711346|ref|YP_003737160.1| - 0.0019 18.8 0.1 0.0025 18.4 0.1 1.2 1 0 0 1 1 1 1 SlyX NCD3G PF07562.14 gi|300711346|ref|YP_003737160.1| - 0.011 15.7 0.3 0.015 15.2 0.3 1.2 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR zf-C3HC PF07967.13 gi|300711346|ref|YP_003737160.1| - 0.51 10.4 3.9 0.21 11.6 1.2 1.6 2 0 0 2 2 2 0 C3HC zinc finger-like Hydrolase PF00702.26 gi|300711347|ref|YP_003737161.1| - 6.7e-46 157.2 9.6 8.9e-46 156.8 8.4 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 gi|300711347|ref|YP_003737161.1| - 1.6e-44 151.6 7.6 2.2e-44 151.2 2.7 2.7 2 1 1 3 3 3 1 E1-E2 ATPase HMA PF00403.26 gi|300711347|ref|YP_003737161.1| - 1e-26 93.1 0.2 7.6e-12 45.5 0.0 2.9 2 0 0 2 2 2 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|300711347|ref|YP_003737161.1| - 2.4e-07 30.8 2.0 2.5e-05 24.2 1.0 2.6 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300711347|ref|YP_003737161.1| - 0.00031 21.2 1.0 0.0016 18.9 0.1 2.7 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|300711347|ref|YP_003737161.1| - 0.047 13.8 0.1 0.47 10.6 0.0 2.8 3 1 1 4 4 4 0 Haloacid dehalogenase-like hydrolase IreB PF06135.12 gi|300711347|ref|YP_003737161.1| - 0.2 11.9 0.0 31 4.9 0.0 2.5 2 0 0 2 2 2 0 IreB regulatory phosphoprotein HTH_AsnC-type PF13404.6 gi|300711348|ref|YP_003737162.1| - 8.6e-16 57.5 0.3 2.2e-15 56.2 0.3 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|300711348|ref|YP_003737162.1| - 1.5e-13 50.1 0.0 2.3e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|300711348|ref|YP_003737162.1| - 5e-06 26.5 0.0 9.8e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300711348|ref|YP_003737162.1| - 2.3e-05 24.2 0.1 4.4e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|300711348|ref|YP_003737162.1| - 0.00011 22.1 0.0 0.00017 21.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300711348|ref|YP_003737162.1| - 0.00069 19.4 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|300711348|ref|YP_003737162.1| - 0.00098 18.9 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family NapD PF03927.13 gi|300711348|ref|YP_003737162.1| - 0.0031 17.5 0.0 0.0052 16.8 0.0 1.3 1 0 0 1 1 1 1 NapD protein ATPase-cat_bd PF12156.8 gi|300711348|ref|YP_003737162.1| - 0.0091 16.7 1.2 0.015 16.0 1.2 1.4 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase HTH_Crp_2 PF13545.6 gi|300711348|ref|YP_003737162.1| - 0.022 14.7 0.1 0.039 13.9 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|300711348|ref|YP_003737162.1| - 0.041 14.0 0.0 0.093 12.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300711348|ref|YP_003737162.1| - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_23 PF13384.6 gi|300711348|ref|YP_003737162.1| - 0.12 12.2 0.0 0.34 10.8 0.0 1.8 2 0 0 2 2 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|300711348|ref|YP_003737162.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_9 PF08221.11 gi|300711348|ref|YP_003737162.1| - 0.13 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|300711348|ref|YP_003737162.1| - 0.16 11.7 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HTH_Mga PF08280.11 gi|300711348|ref|YP_003737162.1| - 0.2 11.7 0.0 0.32 11.1 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HMA PF00403.26 gi|300711349|ref|YP_003737163.1| - 5.3e-12 46.0 0.3 6e-12 45.8 0.3 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain YdjM PF04307.14 gi|300711351|ref|YP_003737165.1| - 2.1e-17 63.0 14.6 1e-16 60.8 14.6 1.8 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Hydrolase_6 PF13344.6 gi|300711352|ref|YP_003737166.1| - 3.8e-28 97.5 0.0 9e-28 96.4 0.0 1.6 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300711352|ref|YP_003737166.1| - 4.9e-21 74.6 0.3 1.4e-20 73.1 0.2 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|300711352|ref|YP_003737166.1| - 6.9e-13 49.4 0.9 9.6e-12 45.6 0.9 2.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|300711352|ref|YP_003737166.1| - 3.7e-09 36.9 0.0 4.5e-05 23.6 0.0 2.7 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|300711352|ref|YP_003737166.1| - 1.1e-05 25.4 0.0 0.00087 19.1 0.0 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 gi|300711352|ref|YP_003737166.1| - 0.00061 19.4 0.1 0.0015 18.2 0.2 1.6 2 0 0 2 2 2 1 Mitochondrial PGP phosphatase HAD PF12710.7 gi|300711352|ref|YP_003737166.1| - 0.0017 18.8 1.4 0.09 13.2 1.4 2.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.14 gi|300711352|ref|YP_003737166.1| - 0.08 12.5 0.0 0.24 10.9 0.0 1.7 1 1 1 2 2 2 0 HAD superfamily, subfamily IIIB (Acid phosphatase) Aldo_ket_red PF00248.21 gi|300711353|ref|YP_003737167.1| - 1.5e-51 175.4 0.0 1.2e-49 169.1 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family bPH_2 PF03703.14 gi|300711355|ref|YP_003737169.1| - 5.9e-47 157.8 5.9 5.1e-19 68.2 0.4 3.3 3 0 0 3 3 3 3 Bacterial PH domain YwiC PF14256.6 gi|300711355|ref|YP_003737169.1| - 0.0078 16.5 1.2 0.0078 16.5 1.2 2.8 3 0 0 3 3 3 1 YwiC-like protein NuDC PF16273.5 gi|300711355|ref|YP_003737169.1| - 0.021 15.4 4.0 0.034 14.7 0.5 2.1 2 0 0 2 2 2 0 Nuclear distribution C domain bPH_2 PF03703.14 gi|300711356|ref|YP_003737170.1| - 2.7e-17 62.7 0.2 3.5e-17 62.4 0.2 1.1 1 0 0 1 1 1 1 Bacterial PH domain Phage_holin_2_4 PF16082.5 gi|300711356|ref|YP_003737170.1| - 0.12 12.2 1.8 0.24 11.1 1.8 1.5 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like Lactamase_B_3 PF13483.6 gi|300711357|ref|YP_003737171.1| - 1.4e-29 103.1 0.0 1.7e-29 102.8 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|300711357|ref|YP_003737171.1| - 1.1e-07 31.6 0.1 1.6e-07 31.0 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Zn-ribbon_8 PF09723.10 gi|300711358|ref|YP_003737172.1| - 1.9e-09 37.5 12.3 6.8e-05 22.9 1.7 2.2 2 0 0 2 2 2 2 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|300711358|ref|YP_003737172.1| - 3.3e-07 30.1 9.4 0.13 12.2 0.0 3.9 3 1 1 4 4 4 2 zinc-ribbon domain HypA PF01155.19 gi|300711358|ref|YP_003737172.1| - 2.8e-06 27.3 11.5 0.0011 18.9 2.0 2.0 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|300711358|ref|YP_003737172.1| - 5.3e-05 22.5 11.5 0.54 9.7 0.1 4.2 4 0 0 4 4 4 1 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|300711358|ref|YP_003737172.1| - 8.7e-05 22.3 11.3 0.042 13.8 3.0 3.3 2 1 1 3 3 3 2 Nudix N-terminal TF_Zn_Ribbon PF08271.12 gi|300711358|ref|YP_003737172.1| - 0.00024 20.6 13.7 0.41 10.2 0.2 3.7 3 1 0 3 3 3 2 TFIIB zinc-binding PknG_rubred PF16919.5 gi|300711358|ref|YP_003737172.1| - 0.0012 19.1 12.3 0.062 13.5 2.1 2.1 2 0 0 2 2 2 2 Protein kinase G rubredoxin domain DNA_RNApol_7kD PF03604.13 gi|300711358|ref|YP_003737172.1| - 0.0012 18.5 6.7 1.4 8.6 0.0 4.0 4 0 0 4 4 4 1 DNA directed RNA polymerase, 7 kDa subunit Zn_ribbon_SprT PF17283.2 gi|300711358|ref|YP_003737172.1| - 0.002 18.0 9.7 0.24 11.3 1.7 3.4 3 1 0 3 3 3 1 SprT-like zinc ribbon domain ADK_lid PF05191.14 gi|300711358|ref|YP_003737172.1| - 0.0022 18.0 6.0 0.22 11.5 0.2 3.0 3 2 0 3 3 2 2 Adenylate kinase, active site lid TackOD1 PF18551.1 gi|300711358|ref|YP_003737172.1| - 0.004 16.9 8.2 0.27 10.9 8.5 2.2 1 1 0 1 1 1 1 Thaumarchaeal output domain 1 DUF2072 PF09845.9 gi|300711358|ref|YP_003737172.1| - 0.0057 16.9 8.3 0.26 11.6 1.1 2.1 1 1 1 2 2 2 2 Zn-ribbon containing protein LIM PF00412.22 gi|300711358|ref|YP_003737172.1| - 0.0083 16.3 5.6 0.14 12.4 0.3 2.2 2 0 0 2 2 2 1 LIM domain NOB1_Zn_bind PF08772.11 gi|300711358|ref|YP_003737172.1| - 0.019 15.1 11.9 0.11 12.6 1.8 2.4 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like OrfB_Zn_ribbon PF07282.11 gi|300711358|ref|YP_003737172.1| - 0.027 14.4 11.8 0.21 11.6 1.9 2.4 1 1 0 2 2 2 0 Putative transposase DNA-binding domain zf-BED PF02892.15 gi|300711358|ref|YP_003737172.1| - 0.031 14.3 9.5 0.052 13.6 0.3 3.1 1 1 3 4 4 4 0 BED zinc finger zf-C2H2_6 PF13912.6 gi|300711358|ref|YP_003737172.1| - 0.045 13.8 6.4 4.1 7.5 0.1 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 gi|300711358|ref|YP_003737172.1| - 0.05 14.1 6.1 66 4.2 0.1 4.1 4 0 0 4 4 4 0 Zinc-finger double domain Ogr_Delta PF04606.12 gi|300711358|ref|YP_003737172.1| - 0.056 13.4 17.6 3 7.9 0.1 3.6 3 1 0 3 3 3 0 Ogr/Delta-like zinc finger Zn_Tnp_IS1595 PF12760.7 gi|300711358|ref|YP_003737172.1| - 0.058 13.4 13.8 0.78 9.8 5.3 3.3 2 1 1 3 3 3 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|300711358|ref|YP_003737172.1| - 0.087 12.6 11.4 2.2 8.1 0.0 4.0 4 0 0 4 4 4 0 A2L zinc ribbon domain Lar_restr_allev PF14354.6 gi|300711358|ref|YP_003737172.1| - 0.092 13.1 14.4 0.38 11.2 4.0 3.2 1 1 2 3 3 3 0 Restriction alleviation protein Lar Prok-RING_1 PF14446.6 gi|300711358|ref|YP_003737172.1| - 0.13 12.2 12.1 0.51 10.3 1.3 3.0 2 2 0 2 2 2 0 Prokaryotic RING finger family 1 zf_UBZ PF18439.1 gi|300711358|ref|YP_003737172.1| - 0.14 11.8 9.1 11 5.7 0.0 3.9 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_2 PF13240.6 gi|300711358|ref|YP_003737172.1| - 0.14 11.9 16.5 4.9 7.0 0.5 4.2 4 0 0 4 4 4 0 zinc-ribbon domain RNHCP PF12647.7 gi|300711358|ref|YP_003737172.1| - 0.15 12.1 8.1 1.9 8.5 0.8 2.2 2 0 0 2 2 2 0 RNHCP domain zinc_ribbon_9 PF14369.6 gi|300711358|ref|YP_003737172.1| - 0.16 12.2 13.2 1.7 9.0 0.3 3.7 3 1 1 4 4 4 0 zinc-ribbon DUF35_N PF12172.8 gi|300711358|ref|YP_003737172.1| - 0.2 11.6 18.8 0.89 9.5 0.6 4.2 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C2HE PF16278.5 gi|300711358|ref|YP_003737172.1| - 0.22 12.0 9.5 56 4.3 0.2 3.6 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger TFIIS_C PF01096.18 gi|300711358|ref|YP_003737172.1| - 0.27 11.1 9.4 23 4.9 0.1 4.1 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS) Auto_anti-p27 PF06677.12 gi|300711358|ref|YP_003737172.1| - 0.28 11.4 8.5 2.5 8.3 0.7 2.5 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc-ribbons_6 PF07191.12 gi|300711358|ref|YP_003737172.1| - 0.29 11.2 12.6 0.5 10.4 2.5 2.6 2 2 0 2 2 2 0 zinc-ribbons zf-C2H2_4 PF13894.6 gi|300711358|ref|YP_003737172.1| - 0.32 11.9 11.1 13 6.9 0.1 4.1 4 0 0 4 4 4 0 C2H2-type zinc finger DUF2574 PF10836.8 gi|300711358|ref|YP_003737172.1| - 0.38 10.7 2.7 8.7 6.3 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2574) zf-C2H2_3 PF13878.6 gi|300711358|ref|YP_003737172.1| - 0.4 10.6 12.7 1.4 8.8 0.1 4.0 1 1 3 4 4 4 0 zinc-finger of acetyl-transferase ESCO Trm112p PF03966.16 gi|300711358|ref|YP_003737172.1| - 0.47 11.1 5.7 5.8 7.6 2.8 2.9 1 1 1 2 2 2 0 Trm112p-like protein C1_1 PF00130.22 gi|300711358|ref|YP_003737172.1| - 0.57 10.1 7.9 1.3 9.0 1.1 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Anti-TRAP PF15777.5 gi|300711358|ref|YP_003737172.1| - 0.57 10.2 17.1 0.48 10.4 3.8 2.2 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-Mss51 PF13824.6 gi|300711358|ref|YP_003737172.1| - 0.57 10.3 14.9 12 6.1 0.1 4.0 2 2 2 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_ribbon_recom PF13408.6 gi|300711358|ref|YP_003737172.1| - 0.61 10.6 14.5 1.7 9.2 0.2 3.8 1 1 3 4 4 4 0 Recombinase zinc beta ribbon domain zf-RRN7 PF11781.8 gi|300711358|ref|YP_003737172.1| - 0.7 9.6 16.6 3.6 7.3 1.7 4.0 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF2321 PF10083.9 gi|300711358|ref|YP_003737172.1| - 0.83 9.3 6.2 2.6 7.7 0.1 2.7 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-CRD PF17979.1 gi|300711358|ref|YP_003737172.1| - 0.83 9.7 7.7 0.25 11.4 1.2 2.0 1 1 1 2 2 2 0 Cysteine rich domain with multizinc binding regions SIR2 PF02146.17 gi|300711358|ref|YP_003737172.1| - 0.92 9.4 7.0 5 7.0 1.0 2.0 1 1 1 2 2 2 0 Sir2 family zf-RING_5 PF14634.6 gi|300711358|ref|YP_003737172.1| - 1.4 9.0 10.0 5.4 7.1 1.1 2.4 2 0 0 2 2 2 0 zinc-RING finger domain ArfGap PF01412.18 gi|300711358|ref|YP_003737172.1| - 1.4 9.0 9.2 0.65 10.1 1.0 2.5 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf zf-ISL3 PF14690.6 gi|300711358|ref|YP_003737172.1| - 1.9 9.2 10.3 41 4.9 0.1 4.0 4 0 0 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-C2H2 PF00096.26 gi|300711358|ref|YP_003737172.1| - 2.2 8.9 12.4 10 6.8 0.2 3.9 4 0 0 4 4 4 0 Zinc finger, C2H2 type zf-IS66 PF13005.7 gi|300711358|ref|YP_003737172.1| - 2.3 8.7 16.5 9.2 6.8 0.1 4.0 2 1 3 5 5 5 0 zinc-finger binding domain of transposase IS66 zf-tcix PF14952.6 gi|300711358|ref|YP_003737172.1| - 3.1 7.5 17.6 2.5 7.8 0.3 4.2 4 0 0 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding Jiv90 PF14901.6 gi|300711358|ref|YP_003737172.1| - 3.3 7.9 6.8 8.3 6.6 0.9 2.2 2 0 0 2 2 2 0 Cleavage inducing molecular chaperone RNA_POL_M_15KD PF02150.16 gi|300711358|ref|YP_003737172.1| - 4.3 7.3 13.4 29 4.6 0.2 4.0 2 2 2 4 4 4 0 RNA polymerases M/15 Kd subunit DUF4379 PF14311.6 gi|300711358|ref|YP_003737172.1| - 6.2 7.3 10.8 2.6 8.5 2.1 2.2 2 0 0 2 2 2 0 Probable Zinc-ribbon domain C1_4 PF07975.12 gi|300711358|ref|YP_003737172.1| - 6.4 7.1 9.6 11 6.3 1.4 2.4 1 1 0 2 2 2 0 TFIIH C1-like domain zf-Sec23_Sec24 PF04810.15 gi|300711358|ref|YP_003737172.1| - 6.5 6.9 7.9 11 6.2 0.2 2.8 2 2 0 2 2 2 0 Sec23/Sec24 zinc finger zf-C2H2_11 PF16622.5 gi|300711358|ref|YP_003737172.1| - 6.9 6.5 11.7 6.6 6.6 0.1 3.6 4 0 0 4 4 3 0 zinc-finger C2H2-type FdhE PF04216.12 gi|300711358|ref|YP_003737172.1| - 7.4 6.4 9.3 51 3.6 9.5 1.9 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation YhfH PF14149.6 gi|300711358|ref|YP_003737172.1| - 8.4 6.5 12.6 25 5.0 0.1 4.2 4 1 0 4 4 4 0 YhfH-like protein Aldo_ket_red PF00248.21 gi|300711359|ref|YP_003737173.1| - 3.3e-72 243.2 0.0 3.7e-72 243.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Phage_holin_3_6 PF07332.11 gi|300711360|ref|YP_003737174.1| - 0.0039 17.2 1.5 0.0046 17.0 1.5 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 gi|300711360|ref|YP_003737174.1| - 0.017 14.0 4.4 0.018 13.8 4.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AmpE PF17113.5 gi|300711360|ref|YP_003737174.1| - 0.026 13.9 0.5 0.028 13.7 0.5 1.0 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE DUF5326 PF17260.2 gi|300711360|ref|YP_003737174.1| - 0.036 14.2 1.9 0.05 13.7 1.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5326) MacB_PCD PF12704.7 gi|300711360|ref|YP_003737174.1| - 0.051 13.9 0.3 0.077 13.3 0.3 1.4 1 0 0 1 1 1 0 MacB-like periplasmic core domain Trp_oprn_chp PF09534.10 gi|300711360|ref|YP_003737174.1| - 0.089 12.6 1.4 0.1 12.4 1.4 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Tox-WTIP PF15654.6 gi|300711360|ref|YP_003737174.1| - 0.11 12.9 0.5 0.17 12.3 0.5 1.3 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif FeoB_associated PF12669.7 gi|300711360|ref|YP_003737174.1| - 0.17 12.3 0.1 0.17 12.3 0.1 2.2 2 1 0 2 2 2 0 FeoB-associated Cys-rich membrane protein MMPL PF03176.15 gi|300711360|ref|YP_003737174.1| - 0.56 9.1 8.0 0.62 8.9 8.0 1.1 1 0 0 1 1 1 0 MMPL family DUF3040 PF11239.8 gi|300711360|ref|YP_003737174.1| - 1.2 9.5 9.3 1.8 8.9 9.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Yip1 PF04893.17 gi|300711360|ref|YP_003737174.1| - 1.3 8.8 11.9 2.9 7.6 12.1 1.5 1 1 0 1 1 1 0 Yip1 domain CopD PF05425.13 gi|300711361|ref|YP_003737175.1| - 1.4e-06 28.7 5.9 1.4e-06 28.7 5.9 1.7 2 0 0 2 2 2 1 Copper resistance protein D DUF3985 PF13153.6 gi|300711361|ref|YP_003737175.1| - 0.066 13.2 0.8 0.13 12.2 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3985) DUF1056 PF06341.11 gi|300711361|ref|YP_003737175.1| - 0.13 12.6 0.1 0.13 12.6 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1056) Peptidase_M14 PF00246.24 gi|300711362|ref|YP_003737176.1| - 1.8e-24 87.1 0.0 2.1e-24 86.8 0.0 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase TAT_signal PF10518.9 gi|300711362|ref|YP_003737176.1| - 0.0082 16.0 0.7 0.018 14.9 0.7 1.6 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence AChE_tetra PF08674.10 gi|300711362|ref|YP_003737176.1| - 0.024 14.3 0.1 0.063 13.0 0.0 1.7 2 0 0 2 2 2 0 Acetylcholinesterase tetramerisation domain G_glu_transpept PF01019.21 gi|300711363|ref|YP_003737177.1| - 6e-155 516.9 0.0 7e-155 516.7 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase TAT_signal PF10518.9 gi|300711363|ref|YP_003737177.1| - 0.063 13.1 4.0 0.18 11.7 4.0 1.9 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Silic_transp PF03842.13 gi|300711365|ref|YP_003737179.1| - 0.012 14.0 2.0 0.013 13.9 2.0 1.0 1 0 0 1 1 1 0 Silicon transporter AhpC-TSA PF00578.21 gi|300711367|ref|YP_003737181.1| - 2.5e-35 121.1 0.0 3e-35 120.8 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|300711367|ref|YP_003737181.1| - 1.9e-23 82.8 0.0 2.2e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|300711367|ref|YP_003737181.1| - 0.00026 21.1 0.0 0.00033 20.8 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|300711367|ref|YP_003737181.1| - 0.00054 19.6 0.0 0.00069 19.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) SCO1-SenC PF02630.14 gi|300711367|ref|YP_003737181.1| - 0.00059 19.8 0.0 0.00079 19.3 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC GDPD PF03009.17 gi|300711368|ref|YP_003737182.1| - 1.5e-25 90.5 0.0 2.3e-25 89.8 0.0 1.3 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 gi|300711368|ref|YP_003737182.1| - 0.011 16.2 0.2 0.047 14.2 0.0 2.2 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family TAT_signal PF10518.9 gi|300711368|ref|YP_003737182.1| - 0.15 11.9 0.7 0.41 10.6 0.7 1.8 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Filamin PF00630.19 gi|300711369|ref|YP_003737183.1| - 0.15 12.9 0.0 0.26 12.1 0.0 1.4 1 1 0 1 1 1 0 Filamin/ABP280 repeat Helicase_C_2 PF13307.6 gi|300711370|ref|YP_003737184.1| - 8.3e-29 100.9 0.0 1.4e-28 100.2 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|300711370|ref|YP_003737184.1| - 1.8e-06 27.7 0.0 4.1e-06 26.5 0.0 1.6 1 1 0 1 1 1 1 DEAD_2 DEAD PF00270.29 gi|300711370|ref|YP_003737184.1| - 9.6e-05 22.2 0.0 0.42 10.4 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase PhoH PF02562.16 gi|300711370|ref|YP_003737184.1| - 0.00014 21.4 0.0 0.00026 20.5 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein ResIII PF04851.15 gi|300711370|ref|YP_003737184.1| - 0.0002 21.4 0.0 0.0047 16.9 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HBB PF06777.11 gi|300711370|ref|YP_003737184.1| - 0.0028 17.4 0.2 0.016 14.9 0.0 2.2 3 0 0 3 3 3 1 Helical and beta-bridge domain AAA_22 PF13401.6 gi|300711370|ref|YP_003737184.1| - 0.0067 16.7 0.0 1.2 9.4 0.0 3.1 2 1 1 3 3 3 1 AAA domain AAA_25 PF13481.6 gi|300711370|ref|YP_003737184.1| - 0.023 14.2 0.1 0.69 9.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|300711370|ref|YP_003737184.1| - 0.048 13.4 0.0 0.47 10.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|300711370|ref|YP_003737184.1| - 0.12 12.8 0.0 0.52 10.6 0.0 2.0 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|300711370|ref|YP_003737184.1| - 0.2 10.8 0.0 2.3 7.4 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Polyketide_cyc2 PF10604.9 gi|300711371|ref|YP_003737185.1| - 1.5e-08 35.0 2.1 1.9e-08 34.7 2.1 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|300711371|ref|YP_003737185.1| - 0.00036 20.7 0.1 0.0004 20.6 0.1 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|300711371|ref|YP_003737185.1| - 0.046 14.0 0.4 0.057 13.6 0.4 1.3 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein Isochorismatase PF00857.20 gi|300711373|ref|YP_003737187.1| - 7e-39 133.8 0.1 7.9e-39 133.6 0.1 1.0 1 0 0 1 1 1 1 Isochorismatase family Flavin_Reduct PF01613.18 gi|300711374|ref|YP_003737188.1| - 7.1e-22 78.1 0.1 9.4e-22 77.7 0.1 1.1 1 0 0 1 1 1 1 Flavin reductase like domain Fe_dep_repress PF01325.19 gi|300711374|ref|YP_003737188.1| - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Glyoxalase PF00903.25 gi|300711375|ref|YP_003737189.1| - 1.6e-09 38.0 0.9 2.5e-09 37.4 0.9 1.3 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300711375|ref|YP_003737189.1| - 0.004 17.4 0.0 0.0076 16.5 0.0 1.4 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HxlR PF01638.17 gi|300711376|ref|YP_003737190.1| - 1.1e-21 76.5 0.0 1.3e-21 76.2 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.6 gi|300711376|ref|YP_003737190.1| - 3.8e-05 24.1 0.0 5.8e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|300711376|ref|YP_003737190.1| - 0.00014 22.0 0.0 0.00017 21.7 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|300711376|ref|YP_003737190.1| - 0.0033 17.3 0.0 0.0043 16.9 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|300711376|ref|YP_003737190.1| - 0.017 15.1 0.0 0.039 13.9 0.0 1.6 2 0 0 2 2 2 0 MarR family PadR PF03551.14 gi|300711376|ref|YP_003737190.1| - 0.025 14.5 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|300711376|ref|YP_003737190.1| - 0.027 14.4 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300711376|ref|YP_003737190.1| - 0.027 14.4 0.1 0.039 13.8 0.1 1.2 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|300711376|ref|YP_003737190.1| - 0.061 13.3 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Replic_Relax PF13814.6 gi|300711376|ref|YP_003737190.1| - 0.084 12.9 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation RP-C PF03428.13 gi|300711376|ref|YP_003737190.1| - 0.1 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_43 PF09904.9 gi|300711376|ref|YP_003737190.1| - 0.14 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix OGFr_N PF04664.13 gi|300711376|ref|YP_003737190.1| - 0.18 11.3 0.0 0.24 10.9 0.0 1.1 1 0 0 1 1 1 0 Opioid growth factor receptor (OGFr) conserved region Sec10 PF07393.11 gi|300711376|ref|YP_003737190.1| - 0.25 9.7 0.0 0.27 9.6 0.0 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 DoxX PF07681.12 gi|300711377|ref|YP_003737191.1| - 2.1e-12 47.5 6.6 2.1e-12 47.5 6.6 1.6 2 0 0 2 2 2 1 DoxX HR_lesion PF05514.11 gi|300711377|ref|YP_003737191.1| - 7.9e-06 26.1 0.8 0.0049 17.0 0.1 2.1 1 1 1 2 2 2 2 HR-like lesion-inducing DoxX_2 PF13564.6 gi|300711377|ref|YP_003737191.1| - 0.0029 17.7 4.8 0.0029 17.7 4.8 2.1 1 1 1 2 2 2 1 DoxX-like family CBS PF00571.28 gi|300711378|ref|YP_003737192.1| - 1e-25 89.9 4.0 4.7e-12 46.2 0.2 2.1 2 0 0 2 2 2 2 CBS domain tRNA-synt_1b PF00579.25 gi|300711379|ref|YP_003737193.1| - 1.1e-57 195.6 0.0 1.3e-57 195.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) MFS_1 PF07690.16 gi|300711380|ref|YP_003737194.1| - 1.2e-31 110.0 38.9 1.2e-31 110.0 38.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily HalX PF08663.10 gi|300711381|ref|YP_003737195.1| - 8.5e-23 80.5 13.3 1.3e-22 79.9 12.3 1.8 2 0 0 2 2 2 1 HalX domain Response_reg PF00072.24 gi|300711381|ref|YP_003737195.1| - 1.1e-20 73.8 0.1 2.1e-20 73.0 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Lipase_GDSL_2 PF13472.6 gi|300711381|ref|YP_003737195.1| - 0.13 12.6 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Acyl-CoA_dh_1 PF00441.24 gi|300711382|ref|YP_003737196.1| - 4.3e-41 140.6 4.9 7.3e-41 139.9 4.9 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711382|ref|YP_003737196.1| - 5.9e-28 96.9 0.5 2.1e-27 95.2 0.1 2.1 3 0 0 3 3 3 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|300711382|ref|YP_003737196.1| - 3.9e-27 95.1 2.6 1.3e-26 93.5 2.6 1.9 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|300711382|ref|YP_003737196.1| - 1.1e-18 67.8 4.5 1.7e-18 67.2 4.5 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain UVR PF02151.19 gi|300711382|ref|YP_003737196.1| - 0.15 11.8 1.8 0.39 10.5 1.8 1.7 1 0 0 1 1 1 0 UvrB/uvrC motif Methyltransf_3 PF01596.17 gi|300711383|ref|YP_003737197.1| - 7e-22 77.6 0.0 9.1e-22 77.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|300711383|ref|YP_003737197.1| - 1.6e-16 61.3 0.4 4.2e-16 59.9 0.1 1.9 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300711383|ref|YP_003737197.1| - 1.9e-07 31.7 0.0 3.4e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300711383|ref|YP_003737197.1| - 3.9e-07 30.0 0.0 1.2e-06 28.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|300711383|ref|YP_003737197.1| - 0.00011 21.8 0.0 0.00015 21.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|300711383|ref|YP_003737197.1| - 0.00043 21.0 0.0 0.00083 20.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711383|ref|YP_003737197.1| - 0.00045 20.8 0.0 0.00085 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|300711383|ref|YP_003737197.1| - 0.00089 19.1 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|300711383|ref|YP_003737197.1| - 0.0014 18.0 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Peptidase_M20 PF01546.28 gi|300711384|ref|YP_003737198.1| - 6.4e-27 94.6 6.1 1.4e-26 93.5 6.1 1.6 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|300711384|ref|YP_003737198.1| - 7.3e-09 35.6 0.0 1.2e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 M20_dimer PF07687.14 gi|300711384|ref|YP_003737198.1| - 2.1e-05 24.4 0.1 5.5e-05 23.0 0.1 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Lys-AminoMut_A PF09043.11 gi|300711384|ref|YP_003737198.1| - 0.017 13.6 0.0 0.045 12.2 0.0 1.6 2 0 0 2 2 2 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit ADH_N PF08240.12 gi|300711385|ref|YP_003737199.1| - 6.3e-32 109.7 3.2 1.2e-31 108.9 3.2 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|300711385|ref|YP_003737199.1| - 4.2e-21 75.3 0.7 6.3e-21 74.7 0.7 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|300711385|ref|YP_003737199.1| - 9.4e-12 46.1 0.2 2e-11 45.1 0.2 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Amidohydro_2 PF04909.14 gi|300711386|ref|YP_003737200.1| - 5.9e-46 157.6 2.8 7e-46 157.3 2.8 1.1 1 0 0 1 1 1 1 Amidohydrolase FeS_assembly_P PF01883.19 gi|300711387|ref|YP_003737201.1| - 8.5e-16 57.9 0.3 1.4e-13 50.8 0.0 2.3 2 0 0 2 2 2 2 Iron-sulfur cluster assembly protein HypA PF01155.19 gi|300711388|ref|YP_003737202.1| - 4.1e-05 23.6 0.3 4.5e-05 23.4 0.3 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|300711388|ref|YP_003737202.1| - 0.00091 19.2 0.7 0.0011 18.9 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon DUF2072 PF09845.9 gi|300711388|ref|YP_003737202.1| - 0.0019 18.4 0.6 0.0026 18.0 0.6 1.1 1 0 0 1 1 1 1 Zn-ribbon containing protein Ribosomal_L37e PF01907.19 gi|300711388|ref|YP_003737202.1| - 0.0024 18.0 0.2 0.0029 17.7 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e zinc_ribbon_15 PF17032.5 gi|300711388|ref|YP_003737202.1| - 0.0053 17.5 0.5 0.006 17.3 0.5 1.1 1 0 0 1 1 1 1 zinc-ribbon family zinc_ribbon_2 PF13240.6 gi|300711388|ref|YP_003737202.1| - 0.011 15.4 1.9 3 7.7 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|300711388|ref|YP_003737202.1| - 0.012 15.0 1.6 0.32 10.5 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-CSL PF05207.13 gi|300711388|ref|YP_003737202.1| - 0.033 13.9 0.3 0.045 13.5 0.3 1.3 1 0 0 1 1 1 0 CSL zinc finger zinc-ribbons_6 PF07191.12 gi|300711388|ref|YP_003737202.1| - 0.034 14.1 0.3 0.038 14.0 0.3 1.2 1 0 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|300711388|ref|YP_003737202.1| - 0.044 13.9 6.1 0.11 12.6 5.4 1.8 1 1 1 2 2 2 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|300711388|ref|YP_003737202.1| - 0.044 13.4 3.9 0.42 10.2 0.1 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-trcl PF13451.6 gi|300711388|ref|YP_003737202.1| - 0.066 13.1 0.5 0.066 13.1 0.5 2.0 1 1 1 2 2 2 0 Probable zinc-ribbon domain NRDD PF13597.6 gi|300711388|ref|YP_003737202.1| - 0.098 11.4 0.6 0.1 11.3 0.6 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase A2L_zn_ribbon PF08792.10 gi|300711388|ref|YP_003737202.1| - 0.16 11.7 1.0 5.1 6.9 0.0 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|300711388|ref|YP_003737202.1| - 0.21 11.5 2.0 2.6 8.0 0.2 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DUF3099 PF11298.8 gi|300711389|ref|YP_003737203.1| - 1.2 9.4 3.3 4.3 7.5 3.3 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) FrhB_FdhB_C PF04432.13 gi|300711390|ref|YP_003737204.1| - 6.9e-30 103.9 0.0 1.2e-29 103.1 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|300711390|ref|YP_003737204.1| - 6e-20 71.2 0.0 1.1e-19 70.3 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_21 PF14697.6 gi|300711390|ref|YP_003737204.1| - 2.7e-09 37.0 5.9 2.7e-09 37.0 5.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300711390|ref|YP_003737204.1| - 1e-08 34.6 18.4 2.8e-06 26.9 4.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|300711390|ref|YP_003737204.1| - 2.3e-08 34.0 6.2 2.3e-08 34.0 6.2 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300711390|ref|YP_003737204.1| - 5.5e-08 32.8 4.5 5.5e-08 32.8 4.5 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300711390|ref|YP_003737204.1| - 2.5e-07 31.5 4.2 0.02 15.8 1.3 3.6 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|300711390|ref|YP_003737204.1| - 5.8e-06 26.8 21.1 0.00025 21.6 10.8 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300711390|ref|YP_003737204.1| - 1.2e-05 25.1 3.9 1.2e-05 25.1 3.9 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|300711390|ref|YP_003737204.1| - 0.00022 21.7 9.3 0.016 15.8 0.2 3.4 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300711390|ref|YP_003737204.1| - 0.00041 20.3 3.9 0.00041 20.3 3.9 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300711390|ref|YP_003737204.1| - 0.0022 18.4 20.8 0.0026 18.1 4.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|300711390|ref|YP_003737204.1| - 0.0022 18.2 2.6 0.0059 16.8 2.6 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|300711390|ref|YP_003737204.1| - 0.022 15.3 14.2 0.26 11.9 4.7 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|300711390|ref|YP_003737204.1| - 0.045 14.7 4.7 0.045 14.7 4.7 3.5 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|300711390|ref|YP_003737204.1| - 0.063 13.7 14.9 0.75 10.3 4.3 3.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|300711390|ref|YP_003737204.1| - 2 9.2 15.3 0.61 10.9 2.7 3.5 2 1 1 3 3 3 0 4Fe-4S single cluster domain NIR_SIR PF01077.22 gi|300711391|ref|YP_003737205.1| - 9.9e-46 155.1 0.0 1.4e-34 118.9 0.0 2.4 2 0 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|300711391|ref|YP_003737205.1| - 2.4e-27 94.6 0.0 4.3e-14 52.1 0.0 2.8 2 1 0 2 2 2 2 Nitrite/Sulfite reductase ferredoxin-like half domain DGC PF08859.11 gi|300711391|ref|YP_003737205.1| - 0.052 13.7 0.0 1.5 9.0 0.0 2.5 2 0 0 2 2 2 0 DGC domain PTS_IIB PF02302.17 gi|300711392|ref|YP_003737206.1| - 5.9e-18 65.4 0.6 5.9e-18 65.4 0.6 1.6 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF5424 PF17462.2 gi|300711392|ref|YP_003737206.1| - 0.052 13.5 0.1 0.067 13.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5424) DUF5132 PF17195.4 gi|300711392|ref|YP_003737206.1| - 0.08 13.0 0.1 0.08 13.0 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF5132) PEP-utilizers_C PF02896.18 gi|300711393|ref|YP_003737207.1| - 1.6e-102 342.6 0.0 2.2e-102 342.1 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|300711393|ref|YP_003737207.1| - 7.3e-25 86.5 0.1 1.6e-24 85.4 0.1 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.13 gi|300711393|ref|YP_003737207.1| - 4.8e-24 84.8 1.7 4.8e-24 84.8 1.7 2.5 3 0 0 3 3 3 1 PEP-utilising enzyme, N-terminal PTS-HPr PF00381.19 gi|300711394|ref|YP_003737208.1| - 4.2e-25 87.8 0.5 4.6e-25 87.7 0.5 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site PTS_EIIA_2 PF00359.22 gi|300711395|ref|YP_003737209.1| - 3.3e-34 117.9 0.0 3.7e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Band_3_cyto PF07565.13 gi|300711395|ref|YP_003737209.1| - 0.0096 15.8 0.1 0.028 14.2 0.0 1.6 1 1 0 2 2 2 1 Band 3 cytoplasmic domain PTS_EIIC PF02378.18 gi|300711396|ref|YP_003737210.1| - 3.3e-18 65.8 36.0 3.3e-18 65.8 36.0 1.6 2 0 0 2 2 2 1 Phosphotransferase system, EIIC Wzz PF02706.15 gi|300711396|ref|YP_003737210.1| - 2.3 8.6 4.4 16 5.9 0.1 3.2 3 0 0 3 3 3 0 Chain length determinant protein PfkB PF00294.24 gi|300711397|ref|YP_003737211.1| - 2e-43 148.8 0.3 2.5e-43 148.5 0.3 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|300711397|ref|YP_003737211.1| - 0.0014 18.0 0.0 0.0039 16.6 0.0 1.7 1 1 1 2 2 2 1 Phosphomethylpyrimidine kinase DeoRC PF00455.22 gi|300711398|ref|YP_003737212.1| - 1.7e-47 161.3 0.0 2.3e-47 160.9 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 gi|300711398|ref|YP_003737212.1| - 2e-16 59.4 0.1 3.4e-16 58.7 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain MarR PF01047.22 gi|300711398|ref|YP_003737212.1| - 5.3e-07 29.5 0.0 1.1e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|300711398|ref|YP_003737212.1| - 9.1e-07 28.7 0.2 2e-06 27.6 0.1 1.7 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 gi|300711398|ref|YP_003737212.1| - 6.8e-06 25.9 0.4 1.4e-05 24.9 0.4 1.6 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300711398|ref|YP_003737212.1| - 1e-05 25.5 0.4 2.6e-05 24.2 0.4 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|300711398|ref|YP_003737212.1| - 2.1e-05 24.3 0.1 3.3e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|300711398|ref|YP_003737212.1| - 3.4e-05 23.4 0.0 8.4e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|300711398|ref|YP_003737212.1| - 0.0014 18.4 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|300711398|ref|YP_003737212.1| - 0.0034 17.1 0.2 0.01 15.6 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 gi|300711398|ref|YP_003737212.1| - 0.0094 15.9 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 1 ECF sigma factor HTH_24 PF13412.6 gi|300711398|ref|YP_003737212.1| - 0.015 14.9 0.1 0.027 14.0 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Mga PF08280.11 gi|300711398|ref|YP_003737212.1| - 0.015 15.3 0.0 0.028 14.4 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain TrmB PF01978.19 gi|300711398|ref|YP_003737212.1| - 0.019 14.9 0.0 0.055 13.4 0.0 1.6 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|300711398|ref|YP_003737212.1| - 0.02 15.2 0.0 0.038 14.4 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor Rrf2 PF02082.20 gi|300711398|ref|YP_003737212.1| - 0.027 14.8 0.0 0.054 13.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_Tnp_Tc3_2 PF01498.18 gi|300711398|ref|YP_003737212.1| - 0.055 13.7 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Transposase LexA_DNA_bind PF01726.16 gi|300711398|ref|YP_003737212.1| - 0.066 13.0 0.1 0.23 11.2 0.1 1.9 2 1 0 2 2 1 0 LexA DNA binding domain Put_DNA-bind_N PF06971.13 gi|300711398|ref|YP_003737212.1| - 0.078 13.0 0.0 0.19 11.7 0.0 1.7 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus DsrD PF08679.11 gi|300711398|ref|YP_003737212.1| - 0.096 13.0 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) Sigma70_r4_2 PF08281.12 gi|300711398|ref|YP_003737212.1| - 0.1 12.3 0.2 0.29 10.8 0.1 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_36 PF13730.6 gi|300711398|ref|YP_003737212.1| - 0.11 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_rep_org_N PF09681.10 gi|300711398|ref|YP_003737212.1| - 0.2 11.6 0.0 0.36 10.8 0.0 1.4 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) zf_UBZ PF18439.1 gi|300711399|ref|YP_003737213.1| - 0.0014 18.2 0.0 0.0021 17.6 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|300711399|ref|YP_003737213.1| - 0.03 14.4 0.6 0.038 14.1 0.6 1.3 1 0 0 1 1 1 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300711399|ref|YP_003737213.1| - 0.049 13.1 0.1 0.11 11.9 0.0 1.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-CSL PF05207.13 gi|300711399|ref|YP_003737213.1| - 0.11 12.2 0.3 0.12 12.1 0.3 1.2 1 0 0 1 1 1 0 CSL zinc finger Usp PF00582.26 gi|300711400|ref|YP_003737214.1| - 3.8e-57 192.8 18.2 5.3e-29 101.5 7.6 2.0 2 0 0 2 2 2 2 Universal stress protein family Transketolase_C PF02780.20 gi|300711400|ref|YP_003737214.1| - 0.061 13.2 1.8 2.6 7.9 0.0 2.8 2 1 1 3 3 3 0 Transketolase, C-terminal domain DAO PF01266.24 gi|300711401|ref|YP_003737215.1| - 1.2e-46 159.9 0.8 1.3e-46 159.8 0.8 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|300711401|ref|YP_003737215.1| - 0.00024 20.5 0.0 0.00092 18.5 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|300711401|ref|YP_003737215.1| - 0.00097 18.5 0.0 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 gi|300711401|ref|YP_003737215.1| - 0.0015 17.3 0.0 0.011 14.5 0.0 2.0 2 0 0 2 2 2 1 HI0933-like protein DUF2934 PF11154.8 gi|300711401|ref|YP_003737215.1| - 0.015 14.9 0.2 0.059 13.1 0.2 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2934) Pyr_redox_2 PF07992.14 gi|300711401|ref|YP_003737215.1| - 0.066 12.4 0.0 0.23 10.7 0.0 1.9 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|300711401|ref|YP_003737215.1| - 0.084 12.5 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 gi|300711401|ref|YP_003737215.1| - 0.11 12.5 1.9 0.34 10.9 0.1 2.3 2 0 0 2 2 2 0 FAD-NAD(P)-binding Usp PF00582.26 gi|300711402|ref|YP_003737216.1| - 7.4e-27 94.6 0.0 8.2e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Pollen_allerg_2 PF01620.16 gi|300711402|ref|YP_003737216.1| - 0.037 14.2 0.0 0.047 13.9 0.0 1.2 1 0 0 1 1 1 0 Ribonuclease (pollen allergen) Toprim_3 PF13362.6 gi|300711402|ref|YP_003737216.1| - 0.038 14.4 0.3 6.4 7.2 0.1 2.2 1 1 1 2 2 2 0 Toprim domain PucR PF07905.11 gi|300711402|ref|YP_003737216.1| - 0.076 13.3 0.0 0.13 12.6 0.0 1.4 1 1 0 1 1 1 0 Purine catabolism regulatory protein-like family Octopine_DH PF02317.17 gi|300711402|ref|YP_003737216.1| - 0.14 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain BCCT PF02028.17 gi|300711404|ref|YP_003737218.1| - 3.9e-176 586.3 42.4 4.4e-176 586.1 42.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter ODV-E18 PF10717.9 gi|300711404|ref|YP_003737218.1| - 4.2 7.3 6.6 5.6 6.9 1.1 2.6 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 PALP PF00291.25 gi|300711405|ref|YP_003737219.1| - 9.6e-81 271.4 9.4 1.3e-80 271.0 9.4 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT PF01842.25 gi|300711405|ref|YP_003737219.1| - 7.3e-07 28.8 0.2 2.9e-06 26.9 0.2 2.1 1 1 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|300711405|ref|YP_003737219.1| - 0.00065 20.2 0.1 0.0024 18.4 0.1 2.1 1 0 0 1 1 1 1 ACT domain GCV_T PF01571.21 gi|300711406|ref|YP_003737220.1| - 9.6e-71 238.1 0.1 1.7e-70 237.3 0.0 1.5 2 0 0 2 2 2 1 Aminomethyltransferase folate-binding domain DAO PF01266.24 gi|300711406|ref|YP_003737220.1| - 9.9e-51 173.4 1.1 2.1e-50 172.3 1.1 1.6 1 0 0 1 1 1 1 FAD dependent oxidoreductase GCV_T_C PF08669.11 gi|300711406|ref|YP_003737220.1| - 6.8e-16 58.0 0.7 1.6e-15 56.7 0.1 2.1 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain FAO_M PF16350.5 gi|300711406|ref|YP_003737220.1| - 5.8e-13 49.0 0.0 1.8e-12 47.4 0.0 1.8 1 0 0 1 1 1 1 FAD dependent oxidoreductase central domain NAD_binding_8 PF13450.6 gi|300711406|ref|YP_003737220.1| - 9.5e-05 22.6 0.7 0.00074 19.7 0.1 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|300711406|ref|YP_003737220.1| - 0.00019 20.7 2.2 0.00087 18.5 2.2 2.0 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|300711406|ref|YP_003737220.1| - 0.00027 20.3 0.8 0.06 12.6 0.4 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300711406|ref|YP_003737220.1| - 0.00082 19.4 2.6 0.17 11.9 0.0 2.7 3 0 0 3 3 3 2 FAD-NAD(P)-binding Pyr_redox_2 PF07992.14 gi|300711406|ref|YP_003737220.1| - 0.0014 17.9 0.8 0.08 12.2 0.1 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|300711406|ref|YP_003737220.1| - 0.0024 17.2 2.9 0.25 10.5 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain Pyr_redox PF00070.27 gi|300711406|ref|YP_003737220.1| - 0.0041 17.6 0.6 0.81 10.3 0.2 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|300711406|ref|YP_003737220.1| - 0.0062 15.9 0.0 0.015 14.6 0.0 1.6 1 0 0 1 1 1 1 ThiF family ApbA PF02558.16 gi|300711406|ref|YP_003737220.1| - 0.025 14.2 0.0 0.05 13.2 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Amino_oxidase PF01593.24 gi|300711406|ref|YP_003737220.1| - 0.032 13.5 0.0 0.06 12.6 0.0 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase SoxG PF04268.12 gi|300711406|ref|YP_003737220.1| - 0.033 14.3 0.0 0.31 11.2 0.0 2.3 1 1 0 2 2 2 0 Sarcosine oxidase, gamma subunit family Shikimate_DH PF01488.20 gi|300711406|ref|YP_003737220.1| - 0.034 14.2 0.0 0.064 13.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Thi4 PF01946.17 gi|300711406|ref|YP_003737220.1| - 0.043 13.0 0.1 0.25 10.6 0.0 1.9 2 0 0 2 2 2 0 Thi4 family UDPG_MGDP_dh_N PF03721.14 gi|300711406|ref|YP_003737220.1| - 0.081 12.5 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|300711406|ref|YP_003737220.1| - 0.098 12.9 0.1 0.25 11.6 0.1 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain IclR PF01614.18 gi|300711407|ref|YP_003737221.1| - 4.3e-32 110.7 0.1 7.2e-32 109.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 gi|300711407|ref|YP_003737221.1| - 1.9e-13 50.0 1.4 4.9e-13 48.7 0.2 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|300711407|ref|YP_003737221.1| - 2.3e-08 34.0 0.1 2.3e-08 34.0 0.1 3.1 5 0 0 5 5 5 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|300711407|ref|YP_003737221.1| - 4.1e-06 26.3 0.0 3.1e-05 23.4 0.0 2.4 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300711407|ref|YP_003737221.1| - 4.7e-06 26.4 0.1 4.7e-06 26.4 0.1 2.6 3 0 0 3 3 3 1 MarR family HTH_5 PF01022.20 gi|300711407|ref|YP_003737221.1| - 2.6e-05 24.0 0.0 7.8e-05 22.5 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|300711407|ref|YP_003737221.1| - 0.00016 21.5 0.0 0.0003 20.7 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300711407|ref|YP_003737221.1| - 0.00025 20.9 0.0 0.00099 18.9 0.0 2.0 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.12 gi|300711407|ref|YP_003737221.1| - 0.0013 18.4 0.0 0.0036 17.0 0.0 1.8 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain HTH_23 PF13384.6 gi|300711407|ref|YP_003737221.1| - 0.0018 18.0 0.1 0.11 12.4 0.0 3.1 3 0 0 3 3 3 1 Homeodomain-like domain HTH_28 PF13518.6 gi|300711407|ref|YP_003737221.1| - 0.0022 18.1 0.5 0.02 15.0 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|300711407|ref|YP_003737221.1| - 0.0027 18.2 0.2 0.013 16.0 0.0 2.2 3 0 0 3 3 2 1 Winged helix DNA-binding domain HTH_40 PF14493.6 gi|300711407|ref|YP_003737221.1| - 0.0041 17.5 0.0 0.0076 16.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 gi|300711407|ref|YP_003737221.1| - 0.01 15.6 0.0 0.025 14.4 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_11 PF08279.12 gi|300711407|ref|YP_003737221.1| - 0.014 15.4 0.0 0.051 13.5 0.0 2.0 2 0 0 2 2 2 0 HTH domain B-block_TFIIIC PF04182.12 gi|300711407|ref|YP_003737221.1| - 0.018 15.2 0.0 0.032 14.4 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC LexA_DNA_bind PF01726.16 gi|300711407|ref|YP_003737221.1| - 0.02 14.7 0.0 0.049 13.4 0.0 1.6 1 0 0 1 1 1 0 LexA DNA binding domain HemN_C PF06969.16 gi|300711407|ref|YP_003737221.1| - 0.021 14.9 0.0 0.12 12.5 0.0 2.1 2 0 0 2 2 2 0 HemN C-terminal domain HTH_34 PF13601.6 gi|300711407|ref|YP_003737221.1| - 0.026 14.7 0.0 0.058 13.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|300711407|ref|YP_003737221.1| - 0.028 14.4 0.0 0.08 12.9 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1803 PF08820.10 gi|300711407|ref|YP_003737221.1| - 0.078 13.0 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) Fe_dep_repress PF01325.19 gi|300711407|ref|YP_003737221.1| - 0.095 12.9 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF5558 PF17713.1 gi|300711407|ref|YP_003737221.1| - 0.11 12.8 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5558) HTH_45 PF14947.6 gi|300711407|ref|YP_003737221.1| - 0.15 12.0 0.0 0.37 10.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix LMWPc PF01451.21 gi|300711407|ref|YP_003737221.1| - 0.16 12.4 0.0 2.7 8.4 0.0 2.2 1 1 1 2 2 2 0 Low molecular weight phosphotyrosine protein phosphatase Ring_hydroxyl_A PF00848.19 gi|300711408|ref|YP_003737222.1| - 5.5e-18 65.7 3.0 2.4e-09 37.5 0.0 2.2 1 1 1 2 2 2 2 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 gi|300711408|ref|YP_003737222.1| - 1.1e-16 60.6 0.0 2.2e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|300711408|ref|YP_003737222.1| - 0.0055 16.6 0.0 0.017 15.0 0.0 1.7 2 0 0 2 2 2 1 Rieske-like [2Fe-2S] domain Usp PF00582.26 gi|300711410|ref|YP_003737224.1| - 4e-36 124.6 0.5 4.4e-36 124.5 0.5 1.0 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.24 gi|300711410|ref|YP_003737224.1| - 0.064 12.7 0.5 0.24 10.8 0.3 1.7 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel Pyridox_ox_2 PF12900.7 gi|300711411|ref|YP_003737225.1| - 4.8e-18 65.5 0.0 5.4e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TrmB PF01978.19 gi|300711412|ref|YP_003737226.1| - 1.3e-05 25.0 0.2 1.6e-05 24.7 0.2 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|300711412|ref|YP_003737226.1| - 0.00038 20.4 0.0 0.00049 20.0 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.22 gi|300711412|ref|YP_003737226.1| - 0.0025 17.7 0.0 0.003 17.5 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300711412|ref|YP_003737226.1| - 0.0055 16.7 0.0 0.0073 16.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300711412|ref|YP_003737226.1| - 0.015 15.0 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain FeoC PF09012.10 gi|300711412|ref|YP_003737226.1| - 0.06 13.4 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 FeoC like transcriptional regulator DoxX_3 PF13781.6 gi|300711413|ref|YP_003737227.1| - 0.002 18.7 5.0 0.0022 18.6 4.3 1.5 1 1 0 1 1 1 1 DoxX-like family DoxX PF07681.12 gi|300711413|ref|YP_003737227.1| - 0.01 16.4 12.3 0.01 16.4 12.3 1.7 2 0 0 2 2 2 0 DoxX DoxX PF07681.12 gi|300711414|ref|YP_003737228.1| - 0.00034 21.2 7.8 0.00066 20.2 7.4 1.7 1 1 0 1 1 1 1 DoxX DUF417 PF04224.12 gi|300711414|ref|YP_003737228.1| - 0.00091 18.8 6.0 0.1 12.1 2.6 2.1 2 0 0 2 2 2 2 Protein of unknown function, DUF417 DoxX_3 PF13781.6 gi|300711414|ref|YP_003737228.1| - 0.016 15.9 2.3 0.028 15.1 2.1 1.6 1 1 0 1 1 1 0 DoxX-like family DUF202 PF02656.15 gi|300711414|ref|YP_003737228.1| - 0.019 15.4 2.6 0.021 15.2 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF202) Polysacc_deac_1 PF01522.21 gi|300711416|ref|YP_003737230.1| - 3.3e-10 39.9 0.6 2e-09 37.4 0.1 2.4 2 1 1 3 3 3 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300711416|ref|YP_003737230.1| - 0.0003 20.5 0.0 0.00084 19.1 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) TAT_signal PF10518.9 gi|300711416|ref|YP_003737230.1| - 0.079 12.8 0.4 0.079 12.8 0.4 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence YdjM PF04307.14 gi|300711417|ref|YP_003737231.1| - 8.7e-11 41.4 3.6 1e-10 41.2 3.6 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF1616 PF07760.11 gi|300711418|ref|YP_003737232.1| - 1.7e-75 254.2 0.0 1.9e-75 254.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Gas_vesicle PF00741.18 gi|300711419|ref|YP_003737233.1| - 4.4e-16 58.7 7.5 7.3e-16 58.0 7.5 1.4 1 0 0 1 1 1 1 Gas vesicle protein DUF2061 PF09834.9 gi|300711421|ref|YP_003737235.1| - 0.25 11.9 2.0 0.67 10.5 0.2 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) Polysacc_deac_1 PF01522.21 gi|300711422|ref|YP_003737236.1| - 2.1e-18 66.4 0.1 3.6e-18 65.7 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Chorion_S16 PF05836.12 gi|300711422|ref|YP_003737236.1| - 0.021 15.1 0.1 11 6.3 0.0 3.5 3 1 1 4 4 4 0 Chorion protein S16 DUF2334 PF10096.9 gi|300711422|ref|YP_003737236.1| - 0.022 14.4 0.1 0.032 13.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) HTH_20 PF12840.7 gi|300711423|ref|YP_003737237.1| - 1.1e-06 28.6 1.1 2.2e-06 27.6 1.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300711423|ref|YP_003737237.1| - 5e-06 26.3 0.3 1.1e-05 25.2 0.3 1.6 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|300711423|ref|YP_003737237.1| - 0.00019 21.3 0.1 0.00038 20.3 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|300711423|ref|YP_003737237.1| - 0.00057 19.6 0.2 0.0013 18.5 0.2 1.7 1 1 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|300711423|ref|YP_003737237.1| - 0.0011 18.9 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|300711423|ref|YP_003737237.1| - 0.0021 18.5 0.2 0.0035 17.8 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|300711423|ref|YP_003737237.1| - 0.008 15.9 0.1 0.015 15.0 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 gi|300711423|ref|YP_003737237.1| - 0.017 14.6 0.1 0.046 13.3 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|300711423|ref|YP_003737237.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain FUR PF01475.19 gi|300711423|ref|YP_003737237.1| - 0.042 14.0 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family DUF1492 PF07374.11 gi|300711423|ref|YP_003737237.1| - 0.043 14.0 0.0 0.077 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) HTH_7 PF02796.15 gi|300711423|ref|YP_003737237.1| - 0.14 12.2 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Phosphodiest PF01663.22 gi|300711424|ref|YP_003737238.1| - 1.4e-37 130.2 0.0 7e-36 124.6 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 gi|300711424|ref|YP_003737238.1| - 0.01 15.2 0.0 0.025 13.9 0.0 1.6 2 0 0 2 2 2 0 Metalloenzyme superfamily SIS PF01380.22 gi|300711426|ref|YP_003737240.1| - 3.2e-51 172.6 0.4 1.2e-25 89.8 0.0 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|300711426|ref|YP_003737240.1| - 6.5e-22 78.2 0.3 1.6e-21 76.9 0.3 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|300711426|ref|YP_003737240.1| - 5.4e-20 71.6 0.0 9.5e-20 70.7 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|300711426|ref|YP_003737240.1| - 0.014 15.4 0.1 1.4 9.0 0.0 2.5 2 0 0 2 2 2 0 SIS domain CARDB PF07705.11 gi|300711427|ref|YP_003737241.1| - 0.00086 19.5 0.8 0.0023 18.2 0.8 1.7 1 0 0 1 1 1 1 CARDB Big_3_5 PF16640.5 gi|300711427|ref|YP_003737241.1| - 0.011 15.9 8.1 0.011 15.9 8.1 3.4 3 1 1 4 4 4 0 Bacterial Ig-like domain (group 3) DUF11 PF01345.18 gi|300711427|ref|YP_003737241.1| - 0.15 12.4 9.4 0.066 13.5 4.1 3.1 2 2 0 2 2 2 0 Domain of unknown function DUF11 Fn3-like PF14310.6 gi|300711427|ref|YP_003737241.1| - 0.19 11.9 2.0 2.4 8.3 0.2 3.2 2 1 0 2 2 2 0 Fibronectin type III-like domain Acetyltransf_6 PF13480.7 gi|300711428|ref|YP_003737242.1| - 1.9e-22 80.0 6.0 2.9e-22 79.4 1.4 2.6 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|300711428|ref|YP_003737242.1| - 0.0005 19.1 0.0 0.002 17.0 0.0 1.8 1 1 1 2 2 2 1 FemAB family Abhydrolase_6 PF12697.7 gi|300711429|ref|YP_003737243.1| - 6.2e-11 43.3 6.4 8.2e-11 42.9 6.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300711429|ref|YP_003737243.1| - 4.7e-09 36.3 0.1 0.00017 21.3 0.2 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 gi|300711429|ref|YP_003737243.1| - 5.9e-08 32.6 0.0 1.8e-06 27.7 0.1 2.0 2 0 0 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|300711429|ref|YP_003737243.1| - 1.2e-07 31.3 0.3 7.5e-05 22.1 0.2 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|300711429|ref|YP_003737243.1| - 2.4e-05 24.0 0.4 0.0042 16.7 0.1 2.3 2 1 0 2 2 2 2 Dienelactone hydrolase family AXE1 PF05448.12 gi|300711429|ref|YP_003737243.1| - 0.00073 18.3 0.2 0.11 11.1 0.2 2.6 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|300711429|ref|YP_003737243.1| - 0.0064 16.0 0.1 1.3 8.5 0.3 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family DUF1100 PF06500.11 gi|300711429|ref|YP_003737243.1| - 0.053 12.3 0.0 0.082 11.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) FSH1 PF03959.13 gi|300711429|ref|YP_003737243.1| - 0.078 12.6 0.0 2.3 7.8 0.0 2.2 2 0 0 2 2 2 0 Serine hydrolase (FSH1) zf-CDGSH PF09360.10 gi|300711430|ref|YP_003737244.1| - 2.5e-32 110.8 3.3 4.3e-15 55.6 0.5 2.4 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|300711430|ref|YP_003737244.1| - 2.6e-19 69.0 0.1 5e-19 68.1 0.1 1.5 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_13 PF13370.6 gi|300711430|ref|YP_003737244.1| - 0.0062 17.1 0.4 0.091 13.3 0.5 2.6 2 1 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|300711430|ref|YP_003737244.1| - 0.11 13.2 3.7 0.78 10.5 2.3 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain MSL2-CXC PF16682.5 gi|300711430|ref|YP_003737244.1| - 1 9.5 5.5 14 5.9 0.8 2.5 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 MFS_1 PF07690.16 gi|300711431|ref|YP_003737245.1| - 1.1e-38 133.1 44.7 3.4e-29 101.9 15.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|300711431|ref|YP_003737245.1| - 6.9e-07 28.5 7.5 6.9e-07 28.5 7.5 2.7 2 1 0 2 2 2 2 Sugar (and other) transporter TRI12 PF06609.13 gi|300711431|ref|YP_003737245.1| - 0.00012 20.6 4.6 0.00012 20.6 4.6 1.8 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) PTR2 PF00854.21 gi|300711431|ref|YP_003737245.1| - 0.087 11.6 6.5 0.21 10.4 6.5 1.7 1 0 0 1 1 1 0 POT family DrsE PF02635.15 gi|300711432|ref|YP_003737246.1| - 7.9e-13 48.8 0.0 8.6e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family Dicer_dimer PF03368.14 gi|300711432|ref|YP_003737246.1| - 0.017 15.2 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 Dicer dimerisation domain DrsE_2 PF13686.6 gi|300711432|ref|YP_003737246.1| - 0.041 13.8 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family GvpD PF07088.11 gi|300711432|ref|YP_003737246.1| - 0.19 10.3 0.0 0.21 10.1 0.0 1.1 1 0 0 1 1 1 0 GvpD gas vesicle protein Abhydrolase_3 PF07859.13 gi|300711433|ref|YP_003737247.1| - 6.4e-68 228.8 0.9 9.6e-68 228.2 0.9 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|300711433|ref|YP_003737247.1| - 3.2e-07 29.6 1.7 1.4e-06 27.5 1.7 1.7 1 1 0 1 1 1 1 Carboxylesterase family DLH PF01738.18 gi|300711433|ref|YP_003737247.1| - 0.0025 17.4 0.2 2.2 7.8 0.0 3.0 3 0 0 3 3 3 2 Dienelactone hydrolase family Esterase PF00756.20 gi|300711433|ref|YP_003737247.1| - 0.61 9.7 2.0 4.4 6.9 2.0 2.0 1 1 0 1 1 1 0 Putative esterase Get5_C PF18514.1 gi|300711434|ref|YP_003737248.1| - 0.061 13.1 0.1 9.2 6.1 0.0 2.4 2 0 0 2 2 2 0 Get5 C-terminal domain DUF2334 PF10096.9 gi|300711434|ref|YP_003737248.1| - 0.078 12.6 0.0 0.36 10.4 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2334) Epimerase_2 PF02350.19 gi|300711435|ref|YP_003737249.1| - 4.7e-99 331.5 0.0 5.3e-99 331.4 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase baeRF_family2 PF18844.1 gi|300711435|ref|YP_003737249.1| - 0.00024 21.2 0.5 0.0025 17.9 0.1 2.3 1 1 1 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 2 Glyco_trans_4_2 PF13477.6 gi|300711435|ref|YP_003737249.1| - 0.0058 16.7 0.0 0.009 16.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like DUF2179 PF10035.9 gi|300711435|ref|YP_003737249.1| - 0.061 13.1 0.1 0.19 11.5 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) DUF4910 PF16254.5 gi|300711435|ref|YP_003737249.1| - 0.18 10.7 0.0 7 5.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4910) Glycos_transf_2 PF00535.26 gi|300711436|ref|YP_003737250.1| - 9.9e-19 67.8 0.0 2.1e-18 66.7 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300711436|ref|YP_003737250.1| - 2.8e-06 27.4 0.0 6.7e-06 26.2 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Got1 PF04178.12 gi|300711436|ref|YP_003737250.1| - 0.007 16.8 0.7 0.013 15.9 0.7 1.3 1 0 0 1 1 1 1 Got1/Sft2-like family Glyco_tranf_2_4 PF13704.6 gi|300711436|ref|YP_003737250.1| - 0.023 15.2 0.0 0.045 14.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Pex14_N PF04695.13 gi|300711437|ref|YP_003737251.1| - 0.042 14.5 0.1 0.057 14.1 0.1 1.3 1 1 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Glyco_transf_4 PF13439.6 gi|300711438|ref|YP_003737252.1| - 1.6e-05 25.0 0.4 3.4e-05 23.9 0.4 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 DUF354 PF04007.12 gi|300711438|ref|YP_003737252.1| - 0.00046 19.4 0.0 0.0013 17.9 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_4 PF13579.6 gi|300711438|ref|YP_003737252.1| - 0.0082 16.6 7.0 0.04 14.4 7.0 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Pex14_N PF04695.13 gi|300711438|ref|YP_003737252.1| - 0.098 13.3 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Glyco_trans_1_2 PF13524.6 gi|300711438|ref|YP_003737252.1| - 0.11 12.9 0.1 0.3 11.5 0.1 1.8 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glyco_transf_28 PF03033.20 gi|300711438|ref|YP_003737252.1| - 0.17 11.9 0.0 0.36 10.9 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Prenyltrans PF00432.21 gi|300711439|ref|YP_003737253.1| - 0.07 12.9 3.8 3 7.7 0.0 3.2 3 2 1 4 4 4 0 Prenyltransferase and squalene oxidase repeat BNR_2 PF13088.6 gi|300711440|ref|YP_003737254.1| - 0.0061 15.9 0.3 0.016 14.5 0.3 1.7 1 1 0 1 1 1 1 BNR repeat-like domain End_beta_propel PF12217.8 gi|300711440|ref|YP_003737254.1| - 0.087 11.5 0.0 0.14 10.8 0.0 1.3 1 0 0 1 1 1 0 Catalytic beta propeller domain of bacteriophage endosialidase Sortilin-Vps10 PF15902.5 gi|300711440|ref|YP_003737254.1| - 0.2 10.4 0.0 2.3 6.9 0.0 2.0 2 0 0 2 2 2 0 Sortilin, neurotensin receptor 3, BNR PF02012.20 gi|300711440|ref|YP_003737254.1| - 0.43 10.8 6.2 0.66 10.2 0.1 3.4 4 0 0 4 4 4 0 BNR/Asp-box repeat GFO_IDH_MocA PF01408.22 gi|300711441|ref|YP_003737255.1| - 3e-23 82.9 0.0 4.7e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 gi|300711441|ref|YP_003737255.1| - 0.00019 22.0 0.0 0.00044 20.9 0.0 1.6 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|300711441|ref|YP_003737255.1| - 0.023 14.8 0.0 0.058 13.5 0.0 1.6 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Polysacc_synt PF01943.17 gi|300711442|ref|YP_003737256.1| - 2.3e-28 99.4 13.7 2.3e-28 99.4 13.7 2.3 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|300711442|ref|YP_003737256.1| - 1.9e-22 79.9 5.1 1.9e-22 79.9 5.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|300711442|ref|YP_003737256.1| - 3.5e-20 72.5 16.9 3.5e-20 72.5 16.9 3.7 2 1 1 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|300711442|ref|YP_003737256.1| - 6.4e-11 41.5 23.0 5.6e-07 28.5 7.8 2.4 2 1 1 3 3 3 2 Lipid II flippase MurJ MatE PF01554.18 gi|300711442|ref|YP_003737256.1| - 6e-07 29.3 3.3 6e-07 29.3 3.3 3.8 3 2 1 4 4 4 1 MatE Polysacc_deac_1 PF01522.21 gi|300711443|ref|YP_003737257.1| - 1e-07 31.8 0.0 1.6e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.9 gi|300711443|ref|YP_003737257.1| - 0.24 11.0 0.0 0.36 10.5 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Acetyltransf_9 PF13527.7 gi|300711444|ref|YP_003737258.1| - 3.8e-19 69.0 0.0 9.5e-19 67.7 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300711444|ref|YP_003737258.1| - 0.02 14.8 0.0 0.12 12.3 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300711444|ref|YP_003737258.1| - 0.031 14.5 0.0 0.58 10.4 0.0 2.2 2 0 0 2 2 2 0 Acetyltransferase (GNAT) family BKACE PF05853.12 gi|300711446|ref|YP_003737260.1| - 7.6e-91 304.2 0.1 8.5e-91 304.0 0.1 1.0 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme LMWPc PF01451.21 gi|300711447|ref|YP_003737261.1| - 6.4e-26 91.4 0.0 7.7e-26 91.2 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase ATPgrasp_Ter PF15632.6 gi|300711448|ref|YP_003737262.1| - 1.4e-09 37.8 0.0 2.8e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|300711448|ref|YP_003737262.1| - 1.4e-05 25.2 0.0 3.4e-05 24.0 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|300711448|ref|YP_003737262.1| - 0.0018 17.8 0.0 0.0029 17.1 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain G-patch_2 PF12656.7 gi|300711448|ref|YP_003737262.1| - 0.093 12.8 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 G-patch domain Methyltransf_21 PF05050.12 gi|300711449|ref|YP_003737263.1| - 2.5e-16 60.2 0.0 3.3e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain V_cholerae_RfbT PF05575.11 gi|300711449|ref|YP_003737263.1| - 0.0045 16.3 0.0 0.0072 15.6 0.0 1.2 1 0 0 1 1 1 1 Vibrio cholerae RfbT protein Methyltransf_3 PF01596.17 gi|300711449|ref|YP_003737263.1| - 0.0045 16.2 0.0 0.0072 15.5 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_31 PF13847.6 gi|300711449|ref|YP_003737263.1| - 0.028 14.2 0.0 0.063 13.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 gi|300711449|ref|YP_003737263.1| - 0.16 13.0 0.0 0.57 11.2 0.0 2.1 2 1 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 gi|300711449|ref|YP_003737263.1| - 0.24 11.0 0.0 0.42 10.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DUF354 PF04007.12 gi|300711450|ref|YP_003737264.1| - 5e-21 75.1 0.0 6.9e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_transf_4 PF13439.6 gi|300711450|ref|YP_003737264.1| - 0.035 14.1 0.4 3.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 gi|300711450|ref|YP_003737264.1| - 0.11 11.3 0.0 0.18 10.6 0.0 1.4 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Glyco_hydro_127 PF07944.12 gi|300711451|ref|YP_003737265.1| - 0.0017 17.0 0.0 0.17 10.4 0.0 2.8 2 1 1 3 3 3 2 Beta-L-arabinofuranosidase, GH127 Glyco_hydro_76 PF03663.14 gi|300711451|ref|YP_003737265.1| - 0.2 11.1 0.4 9.3 5.6 0.0 2.6 3 0 0 3 3 3 0 Glycosyl hydrolase family 76 Glycos_transf_1 PF00534.20 gi|300711452|ref|YP_003737266.1| - 6.4e-27 94.2 0.0 8.9e-27 93.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300711452|ref|YP_003737266.1| - 6.5e-23 81.6 0.0 1.1e-22 80.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|300711452|ref|YP_003737266.1| - 1e-05 25.8 0.0 2.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|300711452|ref|YP_003737266.1| - 0.00015 22.3 1.9 0.00015 22.3 1.9 2.2 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|300711452|ref|YP_003737266.1| - 0.00022 21.2 0.4 0.00043 20.3 0.4 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Pox_H7 PF04787.12 gi|300711453|ref|YP_003737267.1| - 0.082 13.4 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Late protein H7 Type2_restr_D3 PF16902.5 gi|300711453|ref|YP_003737267.1| - 0.16 11.9 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain PadR PF03551.14 gi|300711454|ref|YP_003737268.1| - 1e-12 47.8 0.3 1.2e-12 47.6 0.3 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF3545 PF12065.8 gi|300711454|ref|YP_003737268.1| - 0.0059 16.6 1.2 0.0094 15.9 1.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3545) HTH_27 PF13463.6 gi|300711454|ref|YP_003737268.1| - 0.015 15.8 0.0 0.019 15.4 0.0 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|300711454|ref|YP_003737268.1| - 0.025 14.6 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Elf1 PF05129.13 gi|300711455|ref|YP_003737269.1| - 0.0037 17.3 0.4 0.0044 17.0 0.4 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Cys_rich_KTR PF14205.6 gi|300711455|ref|YP_003737269.1| - 0.034 14.0 0.4 0.05 13.4 0.0 1.5 2 0 0 2 2 2 0 Cysteine-rich KTR zf-AN1 PF01428.16 gi|300711455|ref|YP_003737269.1| - 0.12 12.6 3.4 2.2 8.5 0.3 2.4 1 1 0 2 2 2 0 AN1-like Zinc finger zf_C2HC_14 PF18574.1 gi|300711455|ref|YP_003737269.1| - 0.14 12.0 2.3 0.45 10.3 0.0 2.4 3 0 0 3 3 3 0 C2HC Zing finger domain Ribosomal_S27e PF01667.17 gi|300711455|ref|YP_003737269.1| - 0.16 11.7 2.9 11 5.8 2.9 2.2 1 1 0 1 1 1 0 Ribosomal protein S27 Zn-ribbon_8 PF09723.10 gi|300711455|ref|YP_003737269.1| - 0.25 11.5 5.1 2.5 8.3 0.5 2.5 1 1 0 2 2 2 0 Zinc ribbon domain DpnI PF06044.12 gi|300711455|ref|YP_003737269.1| - 0.27 10.9 1.1 0.54 9.9 1.1 1.5 1 1 0 1 1 1 0 Dam-replacing family zinc_ribbon_4 PF13717.6 gi|300711455|ref|YP_003737269.1| - 0.31 11.0 4.2 18 5.3 4.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain PadR PF03551.14 gi|300711457|ref|YP_003737271.1| - 4.5e-17 61.8 0.4 5.5e-17 61.5 0.4 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|300711457|ref|YP_003737271.1| - 0.00015 22.2 0.0 0.00019 21.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF1495 PF07381.11 gi|300711457|ref|YP_003737271.1| - 0.00078 19.2 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_45 PF14947.6 gi|300711457|ref|YP_003737271.1| - 0.0026 17.7 0.0 0.0036 17.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix Replic_Relax PF13814.6 gi|300711457|ref|YP_003737271.1| - 0.026 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Replication-relaxation DUF505 PF04458.12 gi|300711457|ref|YP_003737271.1| - 0.065 11.6 0.1 0.071 11.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_34 PF13601.6 gi|300711457|ref|YP_003737271.1| - 0.073 13.3 0.0 0.082 13.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.14 gi|300711458|ref|YP_003737272.1| - 0.00022 21.1 0.1 0.00026 20.9 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|300711458|ref|YP_003737272.1| - 0.00048 20.0 0.0 0.00067 19.6 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|300711458|ref|YP_003737272.1| - 0.0058 16.4 0.0 0.0072 16.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_27 PF13463.6 gi|300711458|ref|YP_003737272.1| - 0.01 16.3 0.4 0.016 15.7 0.4 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain DUF505 PF04458.12 gi|300711458|ref|YP_003737272.1| - 0.11 10.8 0.0 0.11 10.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) DUF1495 PF07381.11 gi|300711458|ref|YP_003737272.1| - 0.14 12.0 0.0 0.23 11.3 0.0 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) DUF2231 PF09990.9 gi|300711459|ref|YP_003737273.1| - 0.012 16.0 1.8 0.012 16.0 1.8 4.6 3 2 1 4 4 4 0 Predicted membrane protein (DUF2231) Comm PF15957.5 gi|300711459|ref|YP_003737273.1| - 0.092 13.1 7.7 2.3 8.6 0.0 3.4 4 0 0 4 4 4 0 Commissureless Acetyltransf_6 PF13480.7 gi|300711461|ref|YP_003737275.1| - 2e-16 60.4 3.4 5.1e-16 59.1 1.7 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|300711461|ref|YP_003737275.1| - 0.0064 15.4 0.0 0.36 9.7 0.0 2.2 2 0 0 2 2 2 2 FemAB family MarR_2 PF12802.7 gi|300711462|ref|YP_003737276.1| - 1.5e-05 24.8 0.2 2.5e-05 24.1 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|300711462|ref|YP_003737276.1| - 5.3e-05 23.2 0.2 8.9e-05 22.5 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|300711462|ref|YP_003737276.1| - 0.00074 19.4 0.1 0.0017 18.3 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|300711462|ref|YP_003737276.1| - 0.00087 19.1 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|300711462|ref|YP_003737276.1| - 0.0028 17.4 0.0 0.0059 16.4 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain PadR PF03551.14 gi|300711462|ref|YP_003737276.1| - 0.0077 16.2 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RP-C PF03428.13 gi|300711462|ref|YP_003737276.1| - 0.0096 15.6 0.0 0.01 15.5 0.0 1.1 1 0 0 1 1 1 1 Replication protein C N-terminal domain HTH_36 PF13730.6 gi|300711462|ref|YP_003737276.1| - 0.013 15.5 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|300711462|ref|YP_003737276.1| - 0.026 15.0 0.1 0.045 14.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|300711462|ref|YP_003737276.1| - 0.028 14.0 0.0 0.053 13.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 gi|300711462|ref|YP_003737276.1| - 0.052 13.3 0.1 0.094 12.5 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DUF1492 PF07374.11 gi|300711462|ref|YP_003737276.1| - 0.058 13.6 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) HTH_7 PF02796.15 gi|300711462|ref|YP_003737276.1| - 0.12 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase FUR PF01475.19 gi|300711462|ref|YP_003737276.1| - 0.17 12.0 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family Fe-ADH PF00465.19 gi|300711464|ref|YP_003737278.1| - 1e-61 208.8 5.0 1.2e-61 208.6 5.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|300711464|ref|YP_003737278.1| - 7.1e-28 98.0 2.1 8.9e-28 97.6 2.1 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Iso_dh PF00180.20 gi|300711465|ref|YP_003737279.1| - 6.2e-88 295.3 0.0 7e-88 295.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aconitase_C PF00694.19 gi|300711466|ref|YP_003737280.1| - 4.3e-20 72.4 0.0 6.4e-20 71.8 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase PF00330.20 gi|300711467|ref|YP_003737281.1| - 2.4e-145 485.1 0.0 2.7e-145 484.9 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Flagellar_rod PF05149.12 gi|300711467|ref|YP_003737281.1| - 0.13 11.7 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 Paraflagellar rod protein IlvN PF07991.12 gi|300711469|ref|YP_003737283.1| - 1.9e-69 232.5 0.1 2.7e-69 232.0 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|300711469|ref|YP_003737283.1| - 2e-62 209.7 0.3 3e-62 209.1 0.3 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|300711469|ref|YP_003737283.1| - 4.7e-07 29.3 0.0 9.1e-07 28.4 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300711469|ref|YP_003737283.1| - 8.9e-07 29.4 0.1 3.2e-06 27.6 0.1 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|300711469|ref|YP_003737283.1| - 1e-05 25.8 0.0 2.4e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|300711469|ref|YP_003737283.1| - 0.02 14.9 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_7 PF13241.6 gi|300711469|ref|YP_003737283.1| - 0.031 14.7 0.4 0.32 11.4 0.0 2.5 3 0 0 3 3 3 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 gi|300711469|ref|YP_003737283.1| - 0.042 13.8 0.0 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Mur_ligase PF01225.25 gi|300711469|ref|YP_003737283.1| - 0.044 14.1 0.1 0.12 12.7 0.1 1.8 1 0 0 1 1 1 0 Mur ligase family, catalytic domain 3HCDH_N PF02737.18 gi|300711469|ref|YP_003737283.1| - 0.072 13.0 0.5 0.13 12.1 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Oxidored_nitro PF00148.19 gi|300711469|ref|YP_003737283.1| - 0.086 11.6 0.3 0.081 11.6 0.3 1.4 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ThiF PF00899.21 gi|300711469|ref|YP_003737283.1| - 0.12 11.7 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 ThiF family ApbA PF02558.16 gi|300711469|ref|YP_003737283.1| - 0.15 11.7 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ALS_ss_C PF10369.9 gi|300711470|ref|YP_003737284.1| - 4.5e-21 74.8 0.0 7.9e-21 74.1 0.0 1.4 1 0 0 1 1 1 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|300711470|ref|YP_003737284.1| - 2.5e-14 52.9 0.0 1.4e-13 50.5 0.0 2.0 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|300711470|ref|YP_003737284.1| - 1.8e-12 46.8 0.1 8.8e-12 44.6 0.0 2.1 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|300711470|ref|YP_003737284.1| - 0.043 14.4 0.0 0.078 13.6 0.0 1.5 1 0 0 1 1 1 0 ACT domain WIYLD PF10440.9 gi|300711470|ref|YP_003737284.1| - 0.24 11.2 0.5 0.53 10.1 0.0 1.8 2 0 0 2 2 2 0 Ubiquitin-binding WIYLD domain TPP_enzyme_C PF02775.21 gi|300711471|ref|YP_003737285.1| - 1.2e-50 171.3 0.2 1.2e-50 171.3 0.2 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|300711471|ref|YP_003737285.1| - 4e-50 169.8 0.3 4e-50 169.8 0.3 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|300711471|ref|YP_003737285.1| - 2.8e-46 156.6 0.1 5.5e-46 155.7 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain XFP_N PF09364.10 gi|300711471|ref|YP_003737285.1| - 0.057 12.2 0.0 0.095 11.5 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain HMGL-like PF00682.19 gi|300711472|ref|YP_003737286.1| - 2.9e-66 223.7 8.0 2.9e-66 223.7 8.0 1.4 2 0 0 2 2 2 1 HMGL-like Amidohydro_1 PF01979.20 gi|300711472|ref|YP_003737286.1| - 0.0041 16.5 1.4 0.038 13.3 1.4 2.1 1 1 0 1 1 1 1 Amidohydrolase family AP_endonuc_2 PF01261.24 gi|300711472|ref|YP_003737286.1| - 0.084 12.3 0.8 0.24 10.8 0.2 2.0 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Glu-tRNAGln PF02686.15 gi|300711472|ref|YP_003737286.1| - 1.5 9.1 6.1 0.7 10.2 0.3 3.3 3 1 1 4 4 4 0 Glu-tRNAGln amidotransferase C subunit Ferritin PF00210.24 gi|300711473|ref|YP_003737287.1| - 4.1e-24 85.1 0.3 4.9e-24 84.9 0.3 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|300711473|ref|YP_003737287.1| - 1.8e-06 28.4 0.0 2.1e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 gi|300711473|ref|YP_003737287.1| - 8.8e-05 22.7 0.0 0.00011 22.4 0.0 1.3 1 1 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.12 gi|300711473|ref|YP_003737287.1| - 0.0032 17.5 0.9 0.0096 15.9 0.9 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF892) DUF4439 PF14530.6 gi|300711473|ref|YP_003737287.1| - 0.051 14.3 0.0 0.066 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) Glyoxalase PF00903.25 gi|300711475|ref|YP_003737289.1| - 1.5e-12 47.8 0.0 4.5e-07 30.1 0.0 2.4 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300711475|ref|YP_003737289.1| - 5.2e-05 24.0 2.5 0.12 13.2 0.0 2.4 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase_2 PF12681.7 gi|300711475|ref|YP_003737289.1| - 0.00015 21.7 0.1 0.99 9.3 0.0 4.1 4 1 0 4 4 4 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 gi|300711475|ref|YP_003737289.1| - 0.0081 16.4 0.1 0.41 10.9 0.0 2.8 2 2 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|300711475|ref|YP_003737289.1| - 0.035 14.2 0.1 0.24 11.5 0.0 2.4 2 2 1 3 3 3 0 Glyoxalase-like domain Aldedh PF00171.22 gi|300711476|ref|YP_003737290.1| - 9.8e-160 532.0 0.4 1.1e-159 531.8 0.4 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CbiG_mid PF11761.8 gi|300711477|ref|YP_003737291.1| - 0.12 12.5 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cobalamin biosynthesis central region RHH_1 PF01402.21 gi|300711479|ref|YP_003737293.1| - 0.00012 21.8 0.0 0.00021 21.1 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family PhaP_Bmeg PF09602.10 gi|300711479|ref|YP_003737293.1| - 0.049 13.6 0.0 0.057 13.4 0.0 1.0 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Ribosomal_L15e PF00827.17 gi|300711479|ref|YP_003737293.1| - 0.056 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L15 SHOCT PF09851.9 gi|300711479|ref|YP_003737293.1| - 0.11 12.3 2.6 0.11 12.3 2.6 2.1 2 1 1 3 3 3 0 Short C-terminal domain Glycos_transf_2 PF00535.26 gi|300711480|ref|YP_003737294.1| - 1.1e-15 57.9 0.0 1.4e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300711480|ref|YP_003737294.1| - 7.5e-07 29.3 0.0 1.4e-06 28.4 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 NTP_transf_3 PF12804.7 gi|300711480|ref|YP_003737294.1| - 0.00022 21.6 0.1 0.00033 21.1 0.1 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glyco_tranf_2_4 PF13704.6 gi|300711480|ref|YP_003737294.1| - 0.014 15.9 0.0 0.028 14.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 DDE_Tnp_IS1595 PF12762.7 gi|300711480|ref|YP_003737294.1| - 0.065 13.2 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 ISXO2-like transposase domain Polysacc_synt_3 PF13440.6 gi|300711481|ref|YP_003737295.1| - 1.5e-19 70.3 2.0 1.5e-19 70.3 2.0 2.1 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|300711481|ref|YP_003737295.1| - 2.3e-15 56.9 35.0 4.6e-15 55.9 11.9 3.8 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|300711481|ref|YP_003737295.1| - 2.1e-08 33.2 18.1 4.9e-08 32.0 11.3 2.8 1 1 0 2 2 2 2 Lipid II flippase MurJ Polysacc_synt PF01943.17 gi|300711481|ref|YP_003737295.1| - 5.8e-06 25.9 11.6 5.8e-06 25.9 11.6 3.8 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein DUF4010 PF13194.6 gi|300711481|ref|YP_003737295.1| - 0.00024 20.9 5.3 0.00024 20.9 5.3 3.5 4 0 0 4 4 4 2 Domain of unknown function (DUF4010) Phosphodiest PF01663.22 gi|300711482|ref|YP_003737296.1| - 7.4e-11 42.2 4.9 4e-10 39.8 4.9 1.9 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Paramyxo_P_V_N PF13825.6 gi|300711482|ref|YP_003737296.1| - 0.39 10.1 1.2 0.41 10.0 0.2 1.5 2 0 0 2 2 2 0 Paramyxovirus structural protein V/P N-terminus Sulfatase PF00884.23 gi|300711483|ref|YP_003737297.1| - 4.5e-11 42.7 0.0 7.2e-11 42.0 0.0 1.4 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|300711483|ref|YP_003737297.1| - 5e-05 23.0 0.2 0.014 15.0 0.0 2.5 3 0 0 3 3 3 2 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|300711484|ref|YP_003737298.1| - 4.1e-06 26.4 0.0 5.8e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Sulfatase PglZ PF08665.12 gi|300711484|ref|YP_003737298.1| - 0.0053 16.9 0.5 0.013 15.6 0.0 1.8 2 0 0 2 2 2 1 PglZ domain Glycos_transf_1 PF00534.20 gi|300711485|ref|YP_003737299.1| - 8.2e-19 67.8 0.0 1.6e-18 66.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300711485|ref|YP_003737299.1| - 1.4e-14 54.7 0.0 3.5e-14 53.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|300711485|ref|YP_003737299.1| - 1e-06 28.9 0.8 2.4e-06 27.7 0.8 1.6 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_tranf_2_3 PF13641.6 gi|300711486|ref|YP_003737300.1| - 1.5e-19 70.8 0.0 2.3e-19 70.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|300711486|ref|YP_003737300.1| - 9.3e-18 64.6 0.0 1.6e-17 63.8 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|300711486|ref|YP_003737300.1| - 2.6e-13 50.3 0.0 4.3e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|300711486|ref|YP_003737300.1| - 5.8e-09 35.7 0.0 9.6e-09 34.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Mtd_N PF18454.1 gi|300711486|ref|YP_003737300.1| - 0.064 13.3 0.1 0.26 11.4 0.0 2.0 2 0 0 2 2 2 0 Major tropism determinant N-terminal domain AglB_L1 PF18079.1 gi|300711487|ref|YP_003737301.1| - 8.2e-28 96.5 7.1 1.6e-27 95.6 7.1 1.5 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain STT3 PF02516.14 gi|300711487|ref|YP_003737301.1| - 9.6e-19 67.7 15.3 2.7e-18 66.2 15.3 1.8 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Big_6 PF17936.1 gi|300711487|ref|YP_003737301.1| - 0.044 14.1 2.4 0.11 12.8 2.4 1.7 1 0 0 1 1 1 0 Bacterial Ig domain COX7a PF02238.15 gi|300711487|ref|YP_003737301.1| - 0.64 10.5 4.5 0.81 10.1 0.3 3.5 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII DUF368 PF04018.13 gi|300711488|ref|YP_003737302.1| - 9.9e-63 212.0 15.9 1.4e-62 211.5 15.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF368) DUF805 PF05656.14 gi|300711488|ref|YP_003737302.1| - 5.8 7.4 10.3 2.2 8.7 1.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF805) CCG PF02754.16 gi|300711490|ref|YP_003737304.1| - 9.4e-23 80.2 5.4 8.7e-11 41.9 0.0 2.9 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|300711490|ref|YP_003737304.1| - 4.7e-09 36.6 6.6 4.7e-09 36.6 6.6 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|300711490|ref|YP_003737304.1| - 2e-06 28.3 8.8 2e-06 28.3 8.8 3.8 3 2 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|300711490|ref|YP_003737304.1| - 0.00019 22.0 17.1 0.00022 21.7 12.4 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300711490|ref|YP_003737304.1| - 0.00021 21.4 14.5 0.00042 20.4 9.8 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300711490|ref|YP_003737304.1| - 0.00049 20.2 10.1 0.00049 20.2 10.1 3.3 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300711490|ref|YP_003737304.1| - 0.019 15.9 14.8 0.12 13.4 11.4 3.5 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain zf-CSL PF05207.13 gi|300711490|ref|YP_003737304.1| - 0.028 14.1 9.2 0.031 14.0 0.1 4.5 5 0 0 5 5 5 0 CSL zinc finger DUF3390 PF11870.8 gi|300711490|ref|YP_003737304.1| - 0.032 14.6 0.0 0.065 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) DDE_Tnp_ISAZ013 PF07592.11 gi|300711490|ref|YP_003737304.1| - 0.057 12.4 0.0 0.084 11.8 0.0 1.2 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain DUF678 PF05077.12 gi|300711490|ref|YP_003737304.1| - 0.068 13.3 7.8 1.6 8.9 0.2 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF678) Fer4_22 PF17179.4 gi|300711490|ref|YP_003737304.1| - 0.13 13.1 7.6 2.3 9.1 0.3 3.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300711490|ref|YP_003737304.1| - 1.5 8.8 19.6 0.69 9.8 2.9 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain FAD_binding_2 PF00890.24 gi|300711491|ref|YP_003737305.1| - 2.5e-39 135.6 0.6 3e-39 135.3 0.6 1.0 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|300711491|ref|YP_003737305.1| - 1.3e-08 34.6 3.6 2.2e-06 27.3 3.6 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase DAO PF01266.24 gi|300711491|ref|YP_003737305.1| - 2.4e-08 33.9 4.8 1.6e-07 31.3 4.8 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300711491|ref|YP_003737305.1| - 3.8e-08 32.9 0.1 1.5e-05 24.4 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300711491|ref|YP_003737305.1| - 7.5e-08 31.5 0.3 0.00076 18.3 0.8 2.2 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.22 gi|300711491|ref|YP_003737305.1| - 1.2e-07 31.1 3.5 1.8e-07 30.6 2.3 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|300711491|ref|YP_003737305.1| - 1e-05 25.0 1.4 0.0013 18.1 0.8 2.1 2 0 0 2 2 2 2 FAD binding domain AlaDh_PNT_C PF01262.21 gi|300711491|ref|YP_003737305.1| - 0.00086 18.7 1.5 0.0015 17.9 1.5 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|300711491|ref|YP_003737305.1| - 0.0048 17.4 0.2 0.061 13.9 0.6 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300711491|ref|YP_003737305.1| - 0.013 14.8 0.3 0.027 13.7 0.2 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|300711491|ref|YP_003737305.1| - 0.057 13.3 0.8 0.1 12.4 0.8 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|300711491|ref|YP_003737305.1| - 0.072 13.3 1.6 0.19 12.0 1.6 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|300711491|ref|YP_003737305.1| - 0.15 12.5 0.0 0.3 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Trp_halogenase PF04820.14 gi|300711491|ref|YP_003737305.1| - 1.7 7.4 2.8 4.9 5.9 0.7 2.0 2 0 0 2 2 2 0 Tryptophan halogenase DAO PF01266.24 gi|300711492|ref|YP_003737306.1| - 4e-54 184.5 2.5 5.3e-54 184.1 2.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer2_BFD PF04324.15 gi|300711492|ref|YP_003737306.1| - 6.1e-10 39.3 3.0 2.1e-09 37.6 3.0 1.9 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain FAD_binding_2 PF00890.24 gi|300711492|ref|YP_003737306.1| - 1.4e-08 34.3 8.1 3e-07 29.9 8.0 2.2 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300711492|ref|YP_003737306.1| - 9.1e-08 31.7 0.5 3.7e-07 29.7 0.5 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|300711492|ref|YP_003737306.1| - 0.00023 20.5 8.2 0.0031 16.8 8.2 2.1 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|300711492|ref|YP_003737306.1| - 0.00058 19.3 7.2 0.0038 16.6 7.4 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 gi|300711492|ref|YP_003737306.1| - 0.00065 19.2 0.2 0.12 11.8 0.0 2.3 2 0 0 2 2 2 2 GMC oxidoreductase NAD_binding_8 PF13450.6 gi|300711492|ref|YP_003737306.1| - 0.0077 16.4 0.8 0.025 14.8 0.5 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO_C PF16901.5 gi|300711492|ref|YP_003737306.1| - 0.019 14.8 0.0 0.047 13.5 0.0 1.7 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase Lycopene_cycl PF05834.12 gi|300711492|ref|YP_003737306.1| - 0.029 13.4 6.9 0.072 12.1 0.3 2.7 3 0 0 3 3 3 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|300711492|ref|YP_003737306.1| - 0.048 14.2 2.8 0.28 11.8 0.4 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300711492|ref|YP_003737306.1| - 0.13 11.5 0.8 1.1 8.4 0.2 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase T2SS-T3SS_pil_N PF13629.6 gi|300711492|ref|YP_003737306.1| - 0.16 11.7 0.6 3.2 7.5 0.0 2.7 2 0 0 2 2 2 0 Pilus formation protein N terminal region GIDA PF01134.22 gi|300711492|ref|YP_003737306.1| - 0.21 10.6 2.8 0.36 9.8 1.1 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Thi4 PF01946.17 gi|300711492|ref|YP_003737306.1| - 0.22 10.7 5.7 0.16 11.2 0.2 2.4 3 0 0 3 3 3 0 Thi4 family AAA_16 PF13191.6 gi|300711494|ref|YP_003737308.1| - 1.7e-11 44.8 3.3 2.2e-11 44.5 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|300711494|ref|YP_003737308.1| - 0.00097 19.4 0.0 0.002 18.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|300711494|ref|YP_003737308.1| - 0.0051 16.7 0.0 0.016 15.1 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase DUF815 PF05673.13 gi|300711494|ref|YP_003737308.1| - 0.0086 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RNA_helicase PF00910.22 gi|300711494|ref|YP_003737308.1| - 0.03 14.7 0.0 0.046 14.1 0.0 1.2 1 0 0 1 1 1 0 RNA helicase HTH_DeoR PF08220.12 gi|300711494|ref|YP_003737308.1| - 0.039 13.7 0.1 0.11 12.3 0.1 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|300711494|ref|YP_003737308.1| - 0.052 13.5 1.0 0.11 12.5 1.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain AAA PF00004.29 gi|300711494|ref|YP_003737308.1| - 0.055 13.9 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Ploopntkinase3 PF18751.1 gi|300711494|ref|YP_003737308.1| - 0.073 13.0 0.1 1.9 8.3 0.0 2.3 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 MMR_HSR1 PF01926.23 gi|300711494|ref|YP_003737308.1| - 0.1 12.7 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 gi|300711494|ref|YP_003737308.1| - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea FGGY_N PF00370.21 gi|300711495|ref|YP_003737309.1| - 1.9e-78 263.5 0.0 2.4e-78 263.1 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|300711495|ref|YP_003737309.1| - 3e-61 206.6 0.3 5.8e-61 205.7 0.3 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 gi|300711495|ref|YP_003737309.1| - 0.00025 20.6 0.3 0.0029 17.1 0.0 2.3 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family AMP-binding PF00501.28 gi|300711498|ref|YP_003737312.1| - 1.4e-89 300.7 0.0 1.7e-89 300.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711498|ref|YP_003737312.1| - 9.5e-22 77.8 1.2 2.2e-21 76.6 0.5 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Alliinase_C PF04864.13 gi|300711498|ref|YP_003737312.1| - 0.26 10.1 0.0 0.38 9.6 0.0 1.1 1 0 0 1 1 1 0 Allinase bPH_6 PF10756.9 gi|300711499|ref|YP_003737313.1| - 0.026 14.6 1.2 0.026 14.6 0.1 1.5 2 0 0 2 2 2 0 Bacterial PH domain SSF PF00474.17 gi|300711500|ref|YP_003737314.1| - 6.1e-48 163.7 35.4 9.1e-48 163.1 35.4 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family DUF2518 PF10726.9 gi|300711501|ref|YP_003737315.1| - 0.054 13.1 0.2 0.054 13.1 0.2 1.6 2 0 0 2 2 2 0 Protein of function (DUF2518) PMD PF10536.9 gi|300711501|ref|YP_003737315.1| - 0.25 10.4 0.2 0.33 10.0 0.2 1.1 1 0 0 1 1 1 0 Plant mobile domain DUF3566 PF12089.8 gi|300711501|ref|YP_003737315.1| - 0.75 10.2 6.4 1.1e+02 3.1 6.4 2.3 1 1 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) Hydrolase_3 PF08282.12 gi|300711502|ref|YP_003737316.1| - 1.9e-23 83.5 0.0 4e-15 56.3 0.0 2.0 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|300711502|ref|YP_003737316.1| - 3.8e-08 33.9 0.2 8e-05 23.0 0.0 2.4 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|300711502|ref|YP_003737316.1| - 3.7e-06 27.5 1.2 0.11 12.9 0.0 3.2 2 1 1 3 3 3 3 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|300711502|ref|YP_003737316.1| - 3.2e-05 23.6 0.0 0.001 18.6 0.0 2.0 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 gi|300711502|ref|YP_003737316.1| - 0.17 12.0 0.3 0.29 11.2 0.0 1.6 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase EthD PF07110.11 gi|300711504|ref|YP_003737318.1| - 2.1e-17 64.0 0.9 6e-17 62.6 0.9 1.7 1 1 0 1 1 1 1 EthD domain MmlI PF09448.10 gi|300711504|ref|YP_003737318.1| - 3e-14 53.5 0.1 1.3e-12 48.1 0.1 2.0 1 1 0 1 1 1 1 Methylmuconolactone methyl-isomerase Dabb PF07876.12 gi|300711504|ref|YP_003737318.1| - 0.00089 19.8 0.1 0.0012 19.4 0.1 1.2 1 0 0 1 1 1 1 Stress responsive A/B Barrel Domain Cupin_2 PF07883.11 gi|300711505|ref|YP_003737319.1| - 8.6e-13 47.8 0.0 1.4e-12 47.2 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_3 PF05899.12 gi|300711505|ref|YP_003737319.1| - 2e-06 27.4 0.0 2.9e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.12 gi|300711505|ref|YP_003737319.1| - 5.7e-05 22.9 0.0 7.9e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding_2 PF14525.6 gi|300711505|ref|YP_003737319.1| - 0.00032 20.4 0.0 0.00044 20.0 0.0 1.2 1 0 0 1 1 1 1 AraC-binding-like domain AraC_binding PF02311.19 gi|300711505|ref|YP_003737319.1| - 0.002 18.0 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.7 gi|300711505|ref|YP_003737319.1| - 0.0058 16.4 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Cupin KduI PF04962.12 gi|300711505|ref|YP_003737319.1| - 0.083 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 KduI/IolB family Lyx_isomer PF07385.12 gi|300711505|ref|YP_003737319.1| - 0.098 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 D-lyxose isomerase Cupin_7 PF12973.7 gi|300711505|ref|YP_003737319.1| - 0.13 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 ChrR Cupin-like domain cNMP_binding PF00027.29 gi|300711505|ref|YP_003737319.1| - 0.13 12.3 0.2 0.45 10.6 0.2 1.9 1 1 0 1 1 1 0 Cyclic nucleotide-binding domain Ribosomal_L9_C PF03948.14 gi|300711507|ref|YP_003737321.1| - 0.037 14.5 0.0 0.059 13.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain Acetyltransf_1 PF00583.25 gi|300711508|ref|YP_003737322.1| - 5.2e-13 49.3 0.0 6.5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300711508|ref|YP_003737322.1| - 6e-10 39.4 0.0 9.7e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300711508|ref|YP_003737322.1| - 9.6e-10 38.5 0.0 1.3e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300711508|ref|YP_003737322.1| - 3.3e-05 23.8 0.0 6e-05 22.9 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|300711508|ref|YP_003737322.1| - 0.00013 22.2 0.0 0.00018 21.7 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|300711508|ref|YP_003737322.1| - 0.0051 17.0 1.0 0.0065 16.6 1.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PGM_PMM_IV PF00408.20 gi|300711508|ref|YP_003737322.1| - 0.037 14.2 0.1 0.087 13.0 0.1 1.7 1 1 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain Acetyltransf_13 PF13880.6 gi|300711508|ref|YP_003737322.1| - 0.045 13.7 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Methyltransf_11 PF08241.12 gi|300711509|ref|YP_003737323.1| - 5.3e-17 62.2 0.0 8.6e-17 61.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300711509|ref|YP_003737323.1| - 5.7e-15 55.8 0.0 1.3e-14 54.6 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300711509|ref|YP_003737323.1| - 4.4e-07 29.8 0.0 5.7e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300711509|ref|YP_003737323.1| - 4e-06 26.3 0.0 6.2e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|300711509|ref|YP_003737323.1| - 2.3e-05 24.3 0.0 4.4e-05 23.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300711509|ref|YP_003737323.1| - 0.0003 21.5 0.0 0.00046 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|300711509|ref|YP_003737323.1| - 0.00039 20.3 0.0 0.00069 19.5 0.0 1.6 1 1 0 1 1 1 1 Hypothetical methyltransferase DREV PF05219.12 gi|300711509|ref|YP_003737323.1| - 0.00088 18.4 0.0 0.0052 15.9 0.0 2.0 1 1 0 1 1 1 1 DREV methyltransferase Methyltransf_2 PF00891.18 gi|300711509|ref|YP_003737323.1| - 0.0079 15.5 0.0 0.014 14.7 0.0 1.3 1 1 0 1 1 1 1 O-methyltransferase domain RrnaAD PF00398.20 gi|300711509|ref|YP_003737323.1| - 0.0091 15.1 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|300711509|ref|YP_003737323.1| - 0.019 15.1 0.0 0.031 14.4 0.0 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase MTS PF05175.14 gi|300711509|ref|YP_003737323.1| - 0.054 13.0 0.1 0.48 10.0 0.1 2.1 1 1 0 1 1 1 0 Methyltransferase small domain NNMT_PNMT_TEMT PF01234.17 gi|300711509|ref|YP_003737323.1| - 0.17 11.1 0.0 5.5 6.1 0.0 2.1 2 0 0 2 2 2 0 NNMT/PNMT/TEMT family PCMT PF01135.19 gi|300711509|ref|YP_003737323.1| - 0.18 11.5 0.0 0.32 10.7 0.0 1.5 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Zn-ribbon_8 PF09723.10 gi|300711510|ref|YP_003737324.1| - 0.0029 17.7 3.5 0.0069 16.5 3.5 1.6 1 1 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|300711510|ref|YP_003737324.1| - 0.011 15.8 0.5 0.011 15.8 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|300711510|ref|YP_003737324.1| - 0.015 15.2 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 zinc-ribbons A2L_zn_ribbon PF08792.10 gi|300711510|ref|YP_003737324.1| - 0.029 14.1 1.3 4.4 7.1 0.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain TackOD1 PF18551.1 gi|300711510|ref|YP_003737324.1| - 0.031 13.9 0.2 0.031 13.9 0.2 1.0 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 TFIIS_C PF01096.18 gi|300711510|ref|YP_003737324.1| - 0.045 13.6 4.3 0.52 10.2 0.4 2.3 2 1 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-C2H2 PF00096.26 gi|300711510|ref|YP_003737324.1| - 0.33 11.5 2.0 3.8 8.2 0.1 2.1 1 1 1 2 2 2 0 Zinc finger, C2H2 type PADR1 PF08063.12 gi|300711510|ref|YP_003737324.1| - 0.51 10.2 4.7 3.5 7.5 0.3 2.0 1 1 1 2 2 2 0 PADR1 (NUC008) domain 4HBT PF03061.22 gi|300711512|ref|YP_003737326.1| - 6.9e-15 55.2 0.1 9.2e-15 54.8 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily TackOD1 PF18551.1 gi|300711513|ref|YP_003737327.1| - 2.1e-34 118.8 0.2 2.8e-34 118.4 0.2 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zinc-ribbons_6 PF07191.12 gi|300711513|ref|YP_003737327.1| - 0.0011 19.0 11.5 0.15 12.0 3.6 2.4 2 0 0 2 2 2 2 zinc-ribbons DZR PF12773.7 gi|300711513|ref|YP_003737327.1| - 0.0054 16.7 15.8 1.7 8.8 3.3 2.6 1 1 1 2 2 2 1 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|300711513|ref|YP_003737327.1| - 0.007 16.3 13.4 0.018 15.0 1.7 3.7 1 1 2 3 3 3 1 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|300711513|ref|YP_003737327.1| - 0.011 15.3 4.9 0.011 15.3 4.9 4.0 1 1 2 3 3 3 0 TFIIB zinc-binding RNA_POL_M_15KD PF02150.16 gi|300711513|ref|YP_003737327.1| - 0.016 15.1 1.0 0.016 15.1 1.0 3.6 4 1 0 4 4 4 0 RNA polymerases M/15 Kd subunit HypA PF01155.19 gi|300711513|ref|YP_003737327.1| - 0.055 13.5 14.8 0.22 11.5 1.4 3.2 1 1 4 5 5 5 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2 PF00096.26 gi|300711513|ref|YP_003737327.1| - 0.06 13.8 7.3 0.46 11.0 0.1 4.0 4 0 0 4 4 4 0 Zinc finger, C2H2 type PhnA_Zn_Ribbon PF08274.12 gi|300711513|ref|YP_003737327.1| - 0.073 13.0 6.1 7.8 6.5 0.5 3.8 3 1 0 3 3 3 0 PhnA Zinc-Ribbon NRDD PF13597.6 gi|300711513|ref|YP_003737327.1| - 0.079 11.7 0.1 0.079 11.7 0.1 1.8 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase DnaJ_CXXCXGXG PF00684.19 gi|300711513|ref|YP_003737327.1| - 0.14 12.5 11.1 0.36 11.2 0.9 2.4 2 1 0 2 2 2 0 DnaJ central domain Zn-ribbon_8 PF09723.10 gi|300711513|ref|YP_003737327.1| - 0.2 11.8 22.3 0.77 9.9 2.5 4.1 3 1 0 3 3 3 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|300711513|ref|YP_003737327.1| - 0.4 10.5 11.7 2.2 8.1 0.1 4.3 5 0 0 5 5 5 0 A2L zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|300711513|ref|YP_003737327.1| - 0.46 10.3 14.5 1.1 9.1 2.0 3.8 4 1 0 4 4 4 0 zinc-ribbon domain zf-C2H2_6 PF13912.6 gi|300711513|ref|YP_003737327.1| - 0.48 10.5 5.3 0.29 11.2 0.6 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger DUF2318 PF10080.9 gi|300711513|ref|YP_003737327.1| - 0.69 10.1 8.1 1 9.5 0.6 2.9 1 1 2 3 3 3 0 Predicted membrane protein (DUF2318) zinc_ribbon_4 PF13717.6 gi|300711513|ref|YP_003737327.1| - 0.84 9.6 10.1 31 4.6 2.1 4.1 3 1 1 4 4 4 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|300711513|ref|YP_003737327.1| - 1.2 9.1 10.9 0.33 10.9 0.6 3.1 3 0 0 3 3 3 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300711513|ref|YP_003737327.1| - 3.2 7.3 14.8 18 4.9 0.3 4.3 3 1 1 4 4 4 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|300711513|ref|YP_003737327.1| - 6.3 6.5 16.2 0.48 10.1 0.2 4.4 5 0 0 5 5 4 0 Ubiquitin-Binding Zinc Finger TraB PF01963.17 gi|300711514|ref|YP_003737328.1| - 1.3e-30 107.2 0.0 1.9e-30 106.7 0.0 1.1 1 0 0 1 1 1 1 TraB family PAP2 PF01569.21 gi|300711514|ref|YP_003737328.1| - 8.4 6.2 12.4 18 5.1 8.6 2.6 3 1 0 3 3 3 0 PAP2 superfamily Peptidase_M50 PF02163.22 gi|300711515|ref|YP_003737329.1| - 1.2e-05 24.8 11.0 0.017 14.4 1.1 3.2 2 1 1 3 3 3 3 Peptidase family M50 DUF3021 PF11457.8 gi|300711515|ref|YP_003737329.1| - 2 8.8 7.7 0.38 11.1 1.3 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF3021) Peptidase_M48 PF01435.18 gi|300711516|ref|YP_003737330.1| - 9.1e-23 81.0 0.1 2.1e-21 76.6 0.1 2.0 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|300711516|ref|YP_003737330.1| - 0.0073 15.5 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 BlaR1 peptidase M56 AIRS_C PF02769.22 gi|300711517|ref|YP_003737331.1| - 1.3e-20 74.1 0.2 2.3e-20 73.3 0.2 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|300711517|ref|YP_003737331.1| - 1.4e-14 54.5 2.1 3.1e-14 53.4 2.1 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain CTP_transf_like PF01467.26 gi|300711519|ref|YP_003737333.1| - 1.9e-16 60.6 0.0 2.1e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like Prok-JAB PF14464.6 gi|300711520|ref|YP_003737334.1| - 1.2e-08 34.7 0.0 2.1e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|300711520|ref|YP_003737334.1| - 0.00045 20.2 0.0 0.00071 19.5 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain tRNA_anti-codon PF01336.25 gi|300711521|ref|YP_003737335.1| - 2.3e-11 43.5 0.5 5.2e-11 42.4 0.5 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|300711521|ref|YP_003737335.1| - 8.5e-05 22.8 1.2 0.00023 21.4 0.2 2.1 2 0 0 2 2 2 1 S1 RNA binding domain DHH PF01368.20 gi|300711521|ref|YP_003737335.1| - 0.016 15.4 1.1 0.034 14.4 0.5 1.8 2 0 0 2 2 2 0 DHH family tRNA_anti_2 PF13742.6 gi|300711521|ref|YP_003737335.1| - 0.056 13.7 0.0 0.15 12.3 0.0 1.7 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain PLDc_2 PF13091.6 gi|300711522|ref|YP_003737336.1| - 4.4e-47 159.3 0.0 7.3e-27 93.9 0.0 2.2 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 gi|300711522|ref|YP_003737336.1| - 1.4e-08 34.6 0.2 2.6e-05 24.2 0.6 2.6 2 0 0 2 2 2 2 Phospholipase D Active site motif Regulator_TrmB PF11495.8 gi|300711522|ref|YP_003737336.1| - 1.3e-06 27.8 0.3 0.0099 15.1 0.0 2.4 2 0 0 2 2 2 2 Archaeal transcriptional regulator TrmB Isochorismatase PF00857.20 gi|300711522|ref|YP_003737336.1| - 0.0061 16.8 0.0 0.12 12.6 0.0 2.3 2 0 0 2 2 2 1 Isochorismatase family HEAT_2 PF13646.6 gi|300711523|ref|YP_003737337.1| - 1.9e-25 89.0 8.0 4.4e-14 52.6 2.8 3.8 1 1 2 3 3 3 3 HEAT repeats HEAT_PBS PF03130.16 gi|300711523|ref|YP_003737337.1| - 7.6e-14 50.9 10.1 0.0001 22.7 0.0 6.0 6 0 0 6 6 6 4 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|300711523|ref|YP_003737337.1| - 5.8e-10 38.6 0.2 0.006 16.7 0.0 4.1 4 0 0 4 4 4 2 HEAT repeat HEAT_EZ PF13513.6 gi|300711523|ref|YP_003737337.1| - 1.5e-06 28.5 3.0 0.02 15.4 0.2 3.5 3 0 0 3 3 3 2 HEAT-like repeat Arm PF00514.23 gi|300711523|ref|YP_003737337.1| - 0.0024 17.9 0.1 1.5 8.9 0.0 3.3 2 1 2 4 4 4 2 Armadillo/beta-catenin-like repeat DUF883 PF05957.13 gi|300711523|ref|YP_003737337.1| - 0.32 11.6 0.1 0.32 11.6 0.1 3.1 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF883) CDP-OH_P_transf PF01066.21 gi|300711524|ref|YP_003737338.1| - 9.9e-10 39.1 3.5 9.9e-10 39.1 3.5 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Copper-bind PF00127.20 gi|300711525|ref|YP_003737339.1| - 5.3e-10 39.6 0.0 9e-10 38.9 0.0 1.4 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.6 gi|300711525|ref|YP_003737339.1| - 0.014 15.5 0.0 0.075 13.1 0.0 1.8 2 0 0 2 2 2 0 Cupredoxin-like domain Ribosomal_S3Ae PF01015.18 gi|300711526|ref|YP_003737340.1| - 1.3e-54 184.9 0.0 1.5e-54 184.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family GP63 PF17471.2 gi|300711526|ref|YP_003737340.1| - 0.091 12.9 0.0 0.31 11.2 0.0 1.8 2 0 0 2 2 2 0 Gene product 63 SchA_CurD PF04486.12 gi|300711528|ref|YP_003737342.1| - 0.13 12.4 0.0 14 5.8 0.0 2.3 2 0 0 2 2 2 0 SchA/CurD like domain Ribosomal_S13_N PF08069.12 gi|300711529|ref|YP_003737343.1| - 3.3e-24 84.7 0.2 5e-24 84.1 0.2 1.3 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|300711529|ref|YP_003737343.1| - 9.5e-14 51.4 0.3 1.5e-13 50.8 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 GIT1_C PF12205.8 gi|300711529|ref|YP_003737343.1| - 0.074 13.2 0.5 0.11 12.6 0.5 1.2 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term AA_permease_2 PF13520.6 gi|300711530|ref|YP_003737344.1| - 1.5e-30 106.4 41.2 1.9e-30 106.1 41.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|300711530|ref|YP_003737344.1| - 1.2e-22 80.2 35.6 1.6e-22 79.8 35.6 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|300711530|ref|YP_003737344.1| - 4.1e-09 37.1 5.4 4.6e-05 24.0 0.2 3.3 2 1 0 2 2 2 2 Universal stress protein family AA_permease_C PF13906.6 gi|300711530|ref|YP_003737344.1| - 0.00041 20.4 5.2 0.00041 20.4 5.2 2.6 2 0 0 2 2 2 1 C-terminus of AA_permease TrkA_C PF02080.21 gi|300711531|ref|YP_003737345.1| - 5.1e-10 39.0 1.6 9.4e-10 38.2 1.6 1.5 1 0 0 1 1 1 1 TrkA-C domain HTH_24 PF13412.6 gi|300711531|ref|YP_003737345.1| - 1.3e-09 37.5 0.2 3e-09 36.3 0.2 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300711531|ref|YP_003737345.1| - 1.2e-08 34.7 0.4 2.6e-08 33.6 0.4 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|300711531|ref|YP_003737345.1| - 3e-05 23.9 0.0 6.2e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|300711531|ref|YP_003737345.1| - 0.0034 17.2 0.0 0.012 15.5 0.0 1.9 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.12 gi|300711531|ref|YP_003737345.1| - 0.0038 16.9 0.0 0.008 15.9 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_20 PF12840.7 gi|300711531|ref|YP_003737345.1| - 0.004 17.2 0.0 0.011 15.8 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|300711531|ref|YP_003737345.1| - 0.036 14.2 0.1 0.15 12.2 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|300711531|ref|YP_003737345.1| - 0.041 13.8 0.1 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|300711531|ref|YP_003737345.1| - 0.05 14.0 0.0 0.1 13.0 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator AsnC_trans_reg PF01037.21 gi|300711531|ref|YP_003737345.1| - 0.075 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Lrp/AsnC ligand binding domain DUF2250 PF10007.9 gi|300711531|ref|YP_003737345.1| - 0.2 11.8 0.1 0.44 10.7 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) TrkA_N PF02254.18 gi|300711532|ref|YP_003737346.1| - 1.4e-29 102.7 0.5 2e-22 79.6 0.5 3.3 3 0 0 3 3 3 2 TrkA-N domain TrkA_C PF02080.21 gi|300711532|ref|YP_003737346.1| - 2.7e-23 81.6 7.7 1.1e-11 44.4 0.1 3.2 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|300711532|ref|YP_003737346.1| - 2.5e-09 37.5 0.8 2e-05 24.9 0.5 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding ApbA PF02558.16 gi|300711532|ref|YP_003737346.1| - 1.4e-05 24.8 0.0 0.00018 21.2 0.0 2.4 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|300711532|ref|YP_003737346.1| - 4.2e-05 23.8 3.0 0.00048 20.4 0.0 3.6 3 1 1 4 4 4 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|300711532|ref|YP_003737346.1| - 0.00069 20.1 0.9 0.004 17.7 0.1 2.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|300711532|ref|YP_003737346.1| - 0.00093 19.1 0.1 0.044 13.7 0.2 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Castor_Poll_mid PF06241.12 gi|300711532|ref|YP_003737346.1| - 0.0019 18.1 0.0 1 9.4 0.0 2.4 2 0 0 2 2 2 2 Castor and Pollux, part of voltage-gated ion channel UDPG_MGDP_dh_N PF03721.14 gi|300711532|ref|YP_003737346.1| - 0.0029 17.2 0.2 0.0079 15.8 0.2 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|300711532|ref|YP_003737346.1| - 0.0061 16.6 0.0 0.025 14.6 0.1 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 gi|300711532|ref|YP_003737346.1| - 0.0088 16.6 0.1 1.7 9.2 0.0 3.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|300711532|ref|YP_003737346.1| - 0.041 13.2 2.0 0.86 8.9 0.2 2.8 2 1 0 2 2 2 0 ThiF family NAD_binding_10 PF13460.6 gi|300711532|ref|YP_003737346.1| - 0.95 9.3 8.6 0.11 12.4 3.0 2.2 3 0 0 3 3 3 0 NAD(P)H-binding TrkH PF02386.16 gi|300711533|ref|YP_003737347.1| - 1.3e-61 208.6 11.9 3.8e-61 207.1 11.9 1.7 1 1 0 1 1 1 1 Cation transport protein Usp PF00582.26 gi|300711535|ref|YP_003737349.1| - 1.5e-09 38.5 0.1 1.7e-09 38.3 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family MoCF_biosynth PF00994.24 gi|300711536|ref|YP_003737350.1| - 6e-32 110.3 0.1 8.7e-32 109.8 0.1 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain MatE PF01554.18 gi|300711538|ref|YP_003737352.1| - 3.4e-48 163.3 12.3 1.7e-26 92.8 5.4 2.4 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|300711538|ref|YP_003737352.1| - 1.1e-11 45.0 22.4 5.4e-11 42.7 6.2 3.7 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|300711538|ref|YP_003737352.1| - 2.1e-11 43.1 6.6 7.7e-11 41.3 2.1 2.3 2 1 0 2 2 2 2 Lipid II flippase MurJ Pilin_N PF07790.11 gi|300711540|ref|YP_003737354.1| - 4.5e-05 24.3 1.7 0.00025 21.9 0.5 2.7 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Actino_peptide PF14408.6 gi|300711540|ref|YP_003737354.1| - 0.096 12.8 1.7 0.26 11.4 1.7 1.7 1 0 0 1 1 1 0 Ribosomally synthesised peptide in actinomycetes Pilin_N PF07790.11 gi|300711541|ref|YP_003737355.1| - 0.0066 17.3 0.0 0.014 16.3 0.0 1.7 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal Pilin_N PF07790.11 gi|300711542|ref|YP_003737356.1| - 0.038 14.9 0.4 0.092 13.7 0.3 1.8 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal T2SSF PF00482.23 gi|300711546|ref|YP_003737360.1| - 1.6e-29 102.4 15.5 6.7e-17 61.6 2.1 3.5 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F DUF3040 PF11239.8 gi|300711546|ref|YP_003737360.1| - 0.05 13.9 0.1 0.05 13.9 0.1 5.6 5 1 1 6 6 6 0 Protein of unknown function (DUF3040) NIT PF08376.10 gi|300711546|ref|YP_003737360.1| - 0.13 12.7 3.7 0.075 13.5 1.5 1.7 2 0 0 2 2 2 0 Nitrate and nitrite sensing DUF2207 PF09972.9 gi|300711546|ref|YP_003737360.1| - 3.6 6.2 14.1 2.3 6.9 0.0 3.9 3 1 1 4 4 4 0 Predicted membrane protein (DUF2207) T2SSE PF00437.20 gi|300711547|ref|YP_003737361.1| - 1.7e-43 148.7 0.0 3e-43 147.9 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|300711547|ref|YP_003737361.1| - 0.00047 19.9 0.1 0.0011 18.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain MttA_Hcf106 PF02416.16 gi|300711549|ref|YP_003737363.1| - 1e-13 50.4 0.5 1.5e-13 49.9 0.5 1.4 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|300711549|ref|YP_003737363.1| - 0.026 15.5 0.0 0.036 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Trypan_PARP PF05887.11 gi|300711549|ref|YP_003737363.1| - 3.2 7.7 9.5 8.6 6.3 9.5 1.6 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) tRNA-synt_2b PF00587.25 gi|300711550|ref|YP_003737364.1| - 7.6e-38 130.3 0.1 1.6e-37 129.2 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|300711550|ref|YP_003737364.1| - 2.3e-15 56.5 0.3 1.1e-14 54.3 0.1 2.2 2 0 0 2 2 2 1 Anticodon binding domain TGS PF02824.21 gi|300711550|ref|YP_003737364.1| - 1.3e-13 50.7 0.2 2.7e-13 49.7 0.2 1.5 1 0 0 1 1 1 1 TGS domain tRNA_SAD PF07973.14 gi|300711550|ref|YP_003737364.1| - 1.5e-12 47.4 0.0 3e-12 46.4 0.0 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain NMT1_3 PF16868.5 gi|300711551|ref|YP_003737365.1| - 7.8e-81 271.7 0.3 8.9e-81 271.5 0.3 1.0 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|300711551|ref|YP_003737365.1| - 6.2e-12 45.9 0.1 1.1e-11 45.1 0.1 1.3 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|300711551|ref|YP_003737365.1| - 7.1e-09 35.6 1.4 9.9e-09 35.1 1.4 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein DctP PF03480.13 gi|300711551|ref|YP_003737365.1| - 0.0051 16.2 0.0 0.011 15.0 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 NMT1_2 PF13379.6 gi|300711551|ref|YP_003737365.1| - 0.0054 16.5 0.2 0.0077 16.0 0.2 1.2 1 0 0 1 1 1 1 NMT1-like family OpuAC PF04069.12 gi|300711551|ref|YP_003737365.1| - 0.011 15.4 0.3 0.027 14.0 0.3 1.8 1 1 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system SBP_bac_3 PF00497.20 gi|300711551|ref|YP_003737365.1| - 0.011 15.1 0.0 0.02 14.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 TAT_signal PF10518.9 gi|300711551|ref|YP_003737365.1| - 0.028 14.3 7.3 0.028 14.3 7.3 2.5 2 1 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1850 PF08905.11 gi|300711552|ref|YP_003737366.1| - 8.6e-20 70.9 0.2 1.2e-19 70.4 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1850) DctM PF06808.12 gi|300711553|ref|YP_003737367.1| - 1e-87 294.7 51.8 1.6e-87 294.0 51.8 1.3 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DUF3394 PF11874.8 gi|300711553|ref|YP_003737367.1| - 7.4e-08 32.3 0.5 1.9e-07 31.0 0.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3394) tRNA-synt_2d PF01409.20 gi|300711554|ref|YP_003737368.1| - 1.8e-82 276.5 0.0 2.4e-82 276.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|300711554|ref|YP_003737368.1| - 7.4e-05 22.3 0.0 0.0095 15.4 0.0 2.3 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|300711554|ref|YP_003737368.1| - 0.00065 18.9 0.0 0.21 10.6 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) MarR_2 PF12802.7 gi|300711554|ref|YP_003737368.1| - 0.011 15.6 3.4 0.033 14.1 0.2 2.8 2 1 0 2 2 2 0 MarR family HTH_27 PF13463.6 gi|300711554|ref|YP_003737368.1| - 0.013 16.0 0.8 5.7 7.5 0.1 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR PF01047.22 gi|300711554|ref|YP_003737368.1| - 0.019 14.9 0.0 0.62 10.0 0.0 2.5 2 0 0 2 2 2 0 MarR family Sun2_CC2 PF18580.1 gi|300711554|ref|YP_003737368.1| - 0.043 14.0 2.7 0.067 13.4 1.0 2.1 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 tRNA_synthFbeta PF17759.1 gi|300711555|ref|YP_003737369.1| - 1.3e-39 135.9 0.0 1.7e-39 135.5 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|300711555|ref|YP_003737369.1| - 4.2e-16 59.0 0.0 5.8e-14 52.1 0.0 2.7 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|300711555|ref|YP_003737369.1| - 6.5e-12 45.5 0.0 1.3e-11 44.5 0.0 1.5 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|300711555|ref|YP_003737369.1| - 1.4e-05 25.2 0.2 0.00081 19.6 0.1 2.9 2 1 0 2 2 2 1 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|300711555|ref|YP_003737369.1| - 0.0044 16.5 0.0 0.0073 15.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) GST_N_2 PF13409.6 gi|300711557|ref|YP_003737371.1| - 4.8e-21 74.8 0.0 9.4e-21 73.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 gi|300711557|ref|YP_003737371.1| - 1.8e-13 50.3 0.5 4.3e-13 49.1 0.5 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 gi|300711557|ref|YP_003737371.1| - 2.3e-07 30.9 0.1 1.3e-06 28.5 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 gi|300711557|ref|YP_003737371.1| - 0.00014 22.0 0.0 0.00028 21.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 gi|300711557|ref|YP_003737371.1| - 0.00015 22.1 0.0 0.17 12.3 0.0 2.5 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 gi|300711557|ref|YP_003737371.1| - 0.01 15.6 0.1 0.018 14.8 0.1 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain SANT_DAMP1_like PF16282.5 gi|300711557|ref|YP_003737371.1| - 0.011 15.9 0.9 0.03 14.5 0.3 2.0 2 0 0 2 2 2 0 SANT/Myb-like domain of DAMP1 FAD_binding_3 PF01494.19 gi|300711558|ref|YP_003737372.1| - 5.7e-40 137.6 0.0 8.7e-29 100.9 0.0 2.0 2 0 0 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 gi|300711558|ref|YP_003737372.1| - 2.2e-10 40.2 0.5 1.1e-05 24.7 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|300711558|ref|YP_003737372.1| - 8.4e-06 25.9 0.6 2.4e-05 24.5 0.3 1.9 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|300711558|ref|YP_003737372.1| - 0.00019 20.8 0.0 0.00031 20.1 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|300711558|ref|YP_003737372.1| - 0.00029 20.2 0.0 0.00044 19.6 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|300711558|ref|YP_003737372.1| - 0.0003 20.5 0.9 0.00059 19.5 0.5 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|300711558|ref|YP_003737372.1| - 0.0007 18.8 0.0 0.008 15.3 0.0 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|300711558|ref|YP_003737372.1| - 0.0014 17.8 0.0 0.0019 17.4 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|300711558|ref|YP_003737372.1| - 0.002 17.5 0.3 0.0028 17.1 0.3 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase ApbA PF02558.16 gi|300711558|ref|YP_003737372.1| - 0.0092 15.6 0.2 0.018 14.7 0.2 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|300711558|ref|YP_003737372.1| - 0.0094 15.3 0.1 0.016 14.6 0.1 1.2 1 0 0 1 1 1 1 ThiF family SE PF08491.10 gi|300711558|ref|YP_003737372.1| - 0.011 14.8 0.0 0.023 13.8 0.0 1.4 2 0 0 2 2 2 0 Squalene epoxidase Pyr_redox_3 PF13738.6 gi|300711558|ref|YP_003737372.1| - 0.013 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300711558|ref|YP_003737372.1| - 0.016 15.7 0.1 0.032 14.8 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300711558|ref|YP_003737372.1| - 0.031 13.0 0.0 0.041 12.6 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein AhpC-TSA PF00578.21 gi|300711559|ref|YP_003737373.1| - 1.3e-32 112.4 0.0 1.5e-32 112.1 0.0 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|300711559|ref|YP_003737373.1| - 5.4e-23 81.3 0.0 6.2e-23 81.1 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|300711559|ref|YP_003737373.1| - 1.1e-05 25.6 0.0 0.0012 18.9 0.0 2.1 1 1 1 2 2 2 2 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|300711559|ref|YP_003737373.1| - 5.4e-05 22.8 0.0 7.4e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) HD PF01966.22 gi|300711560|ref|YP_003737374.1| - 4.4e-08 33.4 2.6 4.2e-07 30.2 1.6 2.2 2 0 0 2 2 2 1 HD domain PHO4 PF01384.20 gi|300711561|ref|YP_003737375.1| - 2.9e-35 121.9 35.0 1.5e-34 119.5 35.1 1.8 1 1 0 1 1 1 1 Phosphate transporter family SpoVS PF04232.12 gi|300711561|ref|YP_003737375.1| - 1 9.1 6.7 0.085 12.6 1.1 2.0 2 0 0 2 2 2 0 Stage V sporulation protein S (SpoVS) HNH PF01844.23 gi|300711562|ref|YP_003737376.1| - 0.00068 19.8 2.0 0.0026 17.9 2.0 1.9 1 1 0 1 1 1 1 HNH endonuclease zinc_ribbon_15 PF17032.5 gi|300711562|ref|YP_003737376.1| - 0.028 15.2 0.5 0.041 14.6 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbon family FYVE PF01363.21 gi|300711562|ref|YP_003737376.1| - 0.044 13.9 1.0 0.079 13.1 1.0 1.5 1 0 0 1 1 1 0 FYVE zinc finger DUF3268 PF11672.8 gi|300711562|ref|YP_003737376.1| - 0.053 13.8 0.1 0.074 13.4 0.1 1.3 1 0 0 1 1 1 0 zinc-finger-containing domain HNH_5 PF14279.6 gi|300711562|ref|YP_003737376.1| - 0.061 13.2 0.8 0.11 12.3 0.8 1.5 1 1 0 1 1 1 0 HNH endonuclease DZR PF12773.7 gi|300711562|ref|YP_003737376.1| - 0.097 12.7 1.2 0.17 11.9 1.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon Usp PF00582.26 gi|300711563|ref|YP_003737377.1| - 9.3e-22 78.1 0.3 1.1e-21 77.8 0.3 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF2243 PF10002.9 gi|300711564|ref|YP_003737378.1| - 8.6e-40 136.1 10.0 9.9e-40 135.9 10.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2243) DUF3918 PF13056.6 gi|300711564|ref|YP_003737378.1| - 0.027 14.1 0.0 0.027 14.1 0.0 2.5 4 0 0 4 4 4 0 Protein of unknown function (DUF3918) Iron_transport PF10634.9 gi|300711565|ref|YP_003737379.1| - 2.6e-08 34.2 0.0 1.5e-05 25.2 0.0 2.7 2 1 1 3 3 3 2 Fe2+ transport protein eIF-1a PF01176.19 gi|300711567|ref|YP_003737381.1| - 6.8e-22 77.0 0.1 8.5e-22 76.7 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Asn_synthase PF00733.21 gi|300711568|ref|YP_003737382.1| - 2.1e-11 44.1 0.1 2.1e-10 40.8 0.1 2.1 1 1 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|300711568|ref|YP_003737382.1| - 8.8e-08 32.1 0.0 1.9e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|300711568|ref|YP_003737382.1| - 0.0015 18.7 0.0 0.0059 16.8 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain Glucosamine_iso PF01182.20 gi|300711568|ref|YP_003737382.1| - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Methyltransf_25 PF13649.6 gi|300711569|ref|YP_003737383.1| - 1.9e-19 70.2 0.2 4.1e-19 69.1 0.1 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711569|ref|YP_003737383.1| - 8.2e-19 68.1 0.1 1.3e-18 67.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300711569|ref|YP_003737383.1| - 3.6e-13 49.6 0.0 4.1e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300711569|ref|YP_003737383.1| - 2.5e-10 41.0 0.0 4.1e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300711569|ref|YP_003737383.1| - 1.9e-08 33.9 0.0 2.5e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|300711569|ref|YP_003737383.1| - 4.1e-08 33.2 0.0 4.8e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|300711569|ref|YP_003737383.1| - 0.00068 19.3 0.0 0.00085 19.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 gi|300711569|ref|YP_003737383.1| - 0.0025 16.8 0.0 0.0029 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) FtsJ PF01728.19 gi|300711569|ref|YP_003737383.1| - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase AAA_25 PF13481.6 gi|300711570|ref|YP_003737384.1| - 0.099 12.2 0.0 0.13 11.8 0.0 1.3 1 1 0 1 1 1 0 AAA domain PGM_PMM_I PF02878.16 gi|300711571|ref|YP_003737385.1| - 3e-31 108.0 0.1 7.2e-31 106.7 0.0 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|300711571|ref|YP_003737385.1| - 2e-21 76.5 0.1 1e-20 74.3 0.1 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 gi|300711571|ref|YP_003737385.1| - 1.3e-11 44.5 0.0 4.1e-11 42.9 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 gi|300711571|ref|YP_003737385.1| - 0.00024 21.3 0.0 0.00046 20.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ribosomal_L27A PF00828.19 gi|300711571|ref|YP_003737385.1| - 0.0074 17.0 0.0 0.015 15.9 0.0 1.5 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A dCMP_cyt_deam_1 PF00383.23 gi|300711572|ref|YP_003737386.1| - 4.8e-16 58.5 1.1 5.6e-16 58.3 1.1 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region dCMP_cyt_deam_2 PF08211.12 gi|300711572|ref|YP_003737386.1| - 8e-12 45.5 0.7 1e-11 45.2 0.7 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region PNP_UDP_1 PF01048.20 gi|300711573|ref|YP_003737387.1| - 1e-44 152.6 2.2 1.3e-44 152.3 2.2 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Pyr_redox_2 PF07992.14 gi|300711574|ref|YP_003737388.1| - 8e-41 140.2 0.1 1e-40 139.8 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300711574|ref|YP_003737388.1| - 2.2e-08 34.5 0.0 1.2e-06 29.0 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300711574|ref|YP_003737388.1| - 0.0018 18.2 0.1 0.99 9.4 0.0 2.7 3 0 0 3 3 3 2 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|300711574|ref|YP_003737388.1| - 0.011 14.9 0.0 1 8.4 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|300711574|ref|YP_003737388.1| - 0.028 13.7 0.1 6.9 5.9 0.0 2.6 3 0 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain HrcA_DNA-bdg PF03444.15 gi|300711575|ref|YP_003737389.1| - 3e-37 126.1 0.1 4.4e-37 125.6 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.20 gi|300711575|ref|YP_003737389.1| - 1.5e-08 34.9 0.0 2.6e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|300711575|ref|YP_003737389.1| - 1.4e-06 28.1 0.0 2.3e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|300711575|ref|YP_003737389.1| - 0.015 15.2 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|300711575|ref|YP_003737389.1| - 0.045 13.6 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 MarR family Arginase PF00491.21 gi|300711576|ref|YP_003737390.1| - 3.3e-79 266.3 0.2 3.8e-79 266.1 0.2 1.0 1 0 0 1 1 1 1 Arginase family Peptidase_M28 PF04389.17 gi|300711577|ref|YP_003737391.1| - 1.5e-32 112.9 0.8 2.1e-32 112.4 0.8 1.2 1 0 0 1 1 1 1 Peptidase family M28 PA PF02225.22 gi|300711577|ref|YP_003737391.1| - 4.5e-14 52.2 0.0 1.3e-13 50.8 0.0 1.8 1 0 0 1 1 1 1 PA domain Peptidase_M20 PF01546.28 gi|300711577|ref|YP_003737391.1| - 0.00023 20.9 1.6 0.00086 19.1 1.5 1.9 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 gi|300711577|ref|YP_003737391.1| - 0.00038 19.6 0.6 0.00061 18.9 0.6 1.3 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase NAD_kinase PF01513.21 gi|300711578|ref|YP_003737392.1| - 8.5e-15 54.7 1.6 1.8e-14 53.6 0.1 2.1 1 1 2 3 3 3 1 ATP-NAD kinase Sterol-sensing PF12349.8 gi|300711579|ref|YP_003737393.1| - 0.043 13.7 1.4 0.071 12.9 1.4 1.3 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Trp_oprn_chp PF09534.10 gi|300711581|ref|YP_003737395.1| - 0.092 12.5 4.5 2.4 7.9 4.5 2.0 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Cytochrom_B_C PF00032.17 gi|300711582|ref|YP_003737396.1| - 5.2e-10 39.5 2.0 8.3e-10 38.9 0.5 2.0 1 1 0 2 2 2 1 Cytochrome b(C-terminal)/b6/petD Cytochrome_B PF00033.19 gi|300711583|ref|YP_003737397.1| - 9.7e-46 156.0 18.3 1.4e-45 155.5 18.3 1.2 1 0 0 1 1 1 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 gi|300711583|ref|YP_003737397.1| - 2.2e-42 144.9 12.2 7.8e-42 143.1 10.6 2.1 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.6 gi|300711583|ref|YP_003737397.1| - 0.00054 20.5 2.8 0.00054 20.5 2.8 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4405) DUF373 PF04123.13 gi|300711583|ref|YP_003737397.1| - 0.18 11.2 8.0 0.22 10.9 7.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) Rieske PF00355.26 gi|300711584|ref|YP_003737398.1| - 9.7e-06 25.4 0.0 1.7e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain fn1 PF00039.18 gi|300711584|ref|YP_003737398.1| - 0.0015 18.7 0.1 0.0035 17.5 0.1 1.6 1 0 0 1 1 1 1 Fibronectin type I domain Copper-bind PF00127.20 gi|300711586|ref|YP_003737400.1| - 1e-11 45.1 0.0 3.2e-11 43.5 0.0 1.8 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Tmemb_9 PF05434.11 gi|300711587|ref|YP_003737401.1| - 0.21 11.5 0.0 0.32 10.9 0.0 1.2 1 0 0 1 1 1 0 TMEM9 Claudin_2 PF13903.6 gi|300711587|ref|YP_003737401.1| - 0.38 10.5 2.9 0.53 10.0 2.9 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction ABC_export PF16962.5 gi|300711587|ref|YP_003737401.1| - 0.63 8.4 4.9 0.82 8.0 4.9 1.0 1 0 0 1 1 1 0 Putative ABC exporter ABC2_membrane_3 PF12698.7 gi|300711587|ref|YP_003737401.1| - 0.93 8.5 4.8 1.3 8.0 4.8 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein GerA PF03323.13 gi|300711587|ref|YP_003737401.1| - 3 6.2 4.9 4.1 5.8 4.9 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein ATP_synt_H PF05493.13 gi|300711588|ref|YP_003737402.1| - 0.16 12.5 0.0 0.16 12.5 0.0 2.3 2 1 0 2 2 2 0 ATP synthase subunit H Tail_VII PF17091.5 gi|300711588|ref|YP_003737402.1| - 0.24 11.3 4.5 2.6 8.0 0.2 2.6 2 0 0 2 2 2 0 Inovirus G7P protein Merozoite_SPAM PF07133.11 gi|300711589|ref|YP_003737403.1| - 6.2 6.8 24.3 6.2 6.8 24.3 1.1 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) TMEM119 PF15724.5 gi|300711589|ref|YP_003737403.1| - 7.6 6.5 11.1 8 6.4 11.1 1.0 1 0 0 1 1 1 0 TMEM119 family HhH-GPD PF00730.25 gi|300711590|ref|YP_003737404.1| - 1.4e-22 80.2 0.0 1.9e-22 79.8 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|300711590|ref|YP_003737404.1| - 1.3e-10 40.6 0.0 3.4e-10 39.3 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|300711590|ref|YP_003737404.1| - 1.2e-05 25.4 3.9 2.7e-05 24.4 3.9 1.6 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|300711590|ref|YP_003737404.1| - 0.0043 17.6 0.1 0.022 15.4 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|300711590|ref|YP_003737404.1| - 0.028 15.0 0.0 0.098 13.3 0.0 1.8 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold IMS_HHH PF11798.8 gi|300711590|ref|YP_003737404.1| - 0.069 13.5 0.0 0.15 12.5 0.0 1.6 1 0 0 1 1 1 0 IMS family HHH motif HHH_8 PF14716.6 gi|300711590|ref|YP_003737404.1| - 0.076 13.4 0.1 0.19 12.1 0.0 1.7 2 0 0 2 2 2 0 Helix-hairpin-helix domain ATPgrasp_ST PF14397.6 gi|300711591|ref|YP_003737405.1| - 4.5e-32 111.5 0.0 5.6e-32 111.1 0.0 1.1 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp MDD_C PF18376.1 gi|300711592|ref|YP_003737406.1| - 4.7e-05 23.2 0.0 7.1e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 gi|300711592|ref|YP_003737406.1| - 0.0011 19.2 5.3 0.012 15.8 5.3 2.4 1 1 0 1 1 1 1 GHMP kinases N terminal domain TarH PF02203.15 gi|300711592|ref|YP_003737406.1| - 0.041 13.8 0.4 0.076 12.9 0.4 1.4 1 0 0 1 1 1 0 Tar ligand binding domain homologue DAHP_snth_FXD PF18152.1 gi|300711592|ref|YP_003737406.1| - 0.15 12.0 0.2 0.42 10.5 0.1 1.8 2 0 0 2 2 2 0 DAHP synthase ferredoxin-like domain Methyltransf_24 PF13578.6 gi|300711592|ref|YP_003737406.1| - 0.6 11.2 4.0 15 6.7 0.0 3.2 1 1 2 3 3 3 0 Methyltransferase domain Pyr_redox_2 PF07992.14 gi|300711593|ref|YP_003737407.1| - 1.2e-35 123.2 0.4 1.8e-35 122.6 0.4 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300711593|ref|YP_003737407.1| - 8.4e-14 51.9 1.2 8.8e-10 39.0 0.1 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|300711593|ref|YP_003737407.1| - 1.9e-07 31.0 8.3 0.064 12.8 0.1 3.8 4 0 0 4 4 4 3 FAD dependent oxidoreductase TrkA_N PF02254.18 gi|300711593|ref|YP_003737407.1| - 0.0003 21.0 0.1 0.0038 17.5 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_8 PF13450.6 gi|300711593|ref|YP_003737407.1| - 0.0023 18.1 0.8 0.14 12.4 0.0 2.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|300711593|ref|YP_003737407.1| - 0.0039 16.3 5.4 0.043 12.9 0.1 3.1 3 1 1 4 4 4 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|300711593|ref|YP_003737407.1| - 0.0063 16.5 0.8 0.96 9.4 0.0 2.9 3 0 0 3 3 3 1 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|300711593|ref|YP_003737407.1| - 0.0099 15.5 0.0 0.019 14.5 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 gi|300711593|ref|YP_003737407.1| - 0.077 12.2 0.5 4.7 6.4 0.0 2.3 2 0 0 2 2 2 0 Thi4 family PTS_IIB PF02302.17 gi|300711593|ref|YP_003737407.1| - 0.098 13.4 0.0 6 7.6 0.0 2.9 3 0 0 3 3 3 0 PTS system, Lactose/Cellobiose specific IIB subunit Malic_M PF03949.15 gi|300711593|ref|YP_003737407.1| - 0.22 10.8 0.7 11 5.2 0.0 2.6 3 0 0 3 3 3 0 Malic enzyme, NAD binding domain Trp_halogenase PF04820.14 gi|300711593|ref|YP_003737407.1| - 0.31 9.8 0.8 0.53 9.1 0.0 1.8 3 0 0 3 3 3 0 Tryptophan halogenase FdsD PF11390.8 gi|300711596|ref|YP_003737410.1| - 0.042 14.2 0.0 0.06 13.7 0.0 1.2 1 0 0 1 1 1 0 NADH-dependant formate dehydrogenase delta subunit FdsD PMSR PF01625.21 gi|300711597|ref|YP_003737411.1| - 5e-67 224.9 0.2 5.7e-67 224.7 0.2 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Ig_6 PF18452.1 gi|300711598|ref|YP_003737412.1| - 0.049 13.2 0.1 0.082 12.5 0.1 1.3 1 0 0 1 1 1 0 Immunoglobulin domain GSDH PF07995.11 gi|300711600|ref|YP_003737414.1| - 7.2e-65 219.5 0.1 9.8e-65 219.0 0.1 1.1 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase UbiA PF01040.18 gi|300711601|ref|YP_003737415.1| - 4.9e-46 157.1 24.1 5.8e-46 156.8 24.1 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family FtsX PF02687.21 gi|300711601|ref|YP_003737415.1| - 3.7 8.1 14.9 0.053 14.0 2.1 3.3 2 2 0 2 2 2 0 FtsX-like permease family CoA_binding_2 PF13380.6 gi|300711602|ref|YP_003737416.1| - 6.5e-41 139.5 0.2 7.4e-41 139.3 0.2 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|300711602|ref|YP_003737416.1| - 5.3e-06 27.0 0.0 8.4e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain Usp PF00582.26 gi|300711603|ref|YP_003737417.1| - 4.1e-35 121.3 0.8 4.6e-35 121.2 0.8 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|300711603|ref|YP_003737417.1| - 0.0019 18.2 0.0 0.0024 17.9 0.0 1.1 1 0 0 1 1 1 1 DNA photolyase baeRF_family10 PF18854.1 gi|300711603|ref|YP_003737417.1| - 0.045 14.0 0.8 1.8 8.8 0.0 2.1 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 ETF PF01012.21 gi|300711603|ref|YP_003737417.1| - 0.054 13.4 0.1 0.14 12.1 0.1 1.7 1 1 0 1 1 1 0 Electron transfer flavoprotein domain Autoind_bind PF03472.15 gi|300711603|ref|YP_003737417.1| - 0.1 12.1 0.0 0.42 10.1 0.0 1.8 1 1 1 2 2 2 0 Autoinducer binding domain Putative_PNPOx PF01243.20 gi|300711603|ref|YP_003737417.1| - 0.12 12.6 0.0 2.5 8.3 0.0 2.1 2 0 0 2 2 2 0 Pyridoxamine 5'-phosphate oxidase FR47 PF08445.10 gi|300711603|ref|YP_003737417.1| - 0.17 11.9 0.3 2.4 8.2 0.0 2.1 2 0 0 2 2 2 0 FR47-like protein PALP PF00291.25 gi|300711604|ref|YP_003737418.1| - 2.2e-57 194.7 3.7 2.5e-57 194.5 3.7 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TACC_C PF05010.14 gi|300711605|ref|YP_003737419.1| - 0.0077 16.0 1.0 0.0088 15.9 1.0 1.1 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF3496 PF12001.8 gi|300711605|ref|YP_003737419.1| - 0.014 15.8 1.0 0.017 15.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) CALCOCO1 PF07888.11 gi|300711605|ref|YP_003737419.1| - 0.026 13.4 2.3 0.029 13.3 2.3 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like CENP-F_leu_zip PF10473.9 gi|300711605|ref|YP_003737419.1| - 0.039 14.0 4.0 0.047 13.7 4.0 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 E1_UFD PF09358.10 gi|300711605|ref|YP_003737419.1| - 0.048 14.4 0.3 0.066 13.9 0.3 1.2 1 0 0 1 1 1 0 Ubiquitin fold domain HOOK PF05622.12 gi|300711605|ref|YP_003737419.1| - 0.069 11.3 2.8 0.072 11.2 2.8 1.0 1 0 0 1 1 1 0 HOOK protein T4SS PF07996.11 gi|300711605|ref|YP_003737419.1| - 0.089 13.2 0.4 0.55 10.6 0.4 1.9 1 1 0 1 1 1 0 Type IV secretion system proteins DUF1664 PF07889.12 gi|300711605|ref|YP_003737419.1| - 0.11 12.5 0.5 0.16 12.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Nup88 PF10168.9 gi|300711605|ref|YP_003737419.1| - 0.12 10.1 2.1 0.14 10.0 2.1 1.0 1 0 0 1 1 1 0 Nuclear pore component YabA PF06156.13 gi|300711605|ref|YP_003737419.1| - 0.15 12.7 1.6 0.17 12.6 1.6 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF2508 PF10704.9 gi|300711605|ref|YP_003737419.1| - 1.6 9.0 5.2 2.7 8.2 1.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2508) Glycos_trans_3N PF02885.17 gi|300711606|ref|YP_003737420.1| - 0.021 14.7 0.2 0.034 14.0 0.2 1.4 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain TMEM72 PF16054.5 gi|300711606|ref|YP_003737420.1| - 0.14 11.8 0.9 0.21 11.3 0.9 1.2 1 0 0 1 1 1 0 Transmembrane protein family 72 Phage_holin_2_2 PF10746.9 gi|300711606|ref|YP_003737420.1| - 0.31 10.7 2.8 3.7 7.3 0.5 2.6 1 1 1 2 2 2 0 Phage holin T7 family, holin superfamily II DUF502 PF04367.13 gi|300711607|ref|YP_003737421.1| - 1.6e-24 85.8 0.7 2.5e-24 85.2 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF502) MARVEL PF01284.23 gi|300711607|ref|YP_003737421.1| - 0.045 13.8 1.3 0.061 13.4 1.2 1.4 1 1 0 1 1 1 0 Membrane-associating domain SUR7 PF06687.12 gi|300711607|ref|YP_003737421.1| - 0.24 11.0 2.3 0.35 10.5 2.3 1.1 1 0 0 1 1 1 0 SUR7/PalI family zf_C2H2_ZHX PF18387.1 gi|300711608|ref|YP_003737422.1| - 0.024 14.3 0.0 0.042 13.5 0.0 1.4 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain Nudix_N_2 PF14803.6 gi|300711608|ref|YP_003737422.1| - 0.24 11.4 1.7 0.95 9.4 0.4 2.1 2 0 0 2 2 2 0 Nudix N-terminal MS_channel PF00924.18 gi|300711609|ref|YP_003737423.1| - 4.6e-52 176.6 0.0 6.6e-52 176.1 0.0 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel FA_desaturase PF00487.24 gi|300711609|ref|YP_003737423.1| - 0.04 13.8 4.1 0.054 13.3 4.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2516 PF10724.9 gi|300711609|ref|YP_003737423.1| - 0.88 9.9 6.0 1.6 9.0 6.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) CRS1_YhbY PF01985.21 gi|300711610|ref|YP_003737424.1| - 7e-13 48.6 0.0 7.6e-13 48.4 0.0 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Rpr2 PF04032.16 gi|300711611|ref|YP_003737425.1| - 2.6e-10 40.4 0.0 3.3e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF2797 PF10977.8 gi|300711613|ref|YP_003737427.1| - 9.3e-29 101.0 5.4 1.2e-24 87.4 2.2 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2797) AMP-binding PF00501.28 gi|300711614|ref|YP_003737428.1| - 2.2e-94 316.5 0.0 2.8e-94 316.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711614|ref|YP_003737428.1| - 1.6e-21 77.0 1.0 3.4e-21 76.0 1.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|300711614|ref|YP_003737428.1| - 5.7e-14 51.8 1.2 5.7e-14 51.8 1.2 2.2 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus BAT PF15915.5 gi|300711615|ref|YP_003737429.1| - 3.4e-39 134.2 6.5 9.9e-39 132.7 6.5 1.8 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_10 PF04967.12 gi|300711615|ref|YP_003737429.1| - 2.5e-18 65.6 0.0 6.5e-18 64.3 0.0 1.8 1 0 0 1 1 1 1 HTH DNA binding domain Phage_integrase PF00589.22 gi|300711615|ref|YP_003737429.1| - 2.7e-10 40.3 0.0 5.1e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family Sigma70_r4_2 PF08281.12 gi|300711615|ref|YP_003737429.1| - 0.0013 18.3 1.0 0.031 14.0 0.0 3.3 2 1 1 3 3 3 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|300711615|ref|YP_003737429.1| - 0.003 17.0 1.5 0.011 15.3 0.0 2.7 2 1 1 3 3 3 1 Sigma-70, region 4 HTH_20 PF12840.7 gi|300711615|ref|YP_003737429.1| - 0.004 17.2 0.2 0.07 13.2 0.0 2.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_22 PF13309.6 gi|300711615|ref|YP_003737429.1| - 0.025 14.7 0.0 0.28 11.3 0.0 2.3 2 0 0 2 2 2 0 HTH domain MerR PF00376.23 gi|300711615|ref|YP_003737429.1| - 0.11 12.3 1.1 14 5.5 0.0 3.4 4 0 0 4 4 4 0 MerR family regulatory protein GAF_3 PF13492.6 gi|300711615|ref|YP_003737429.1| - 0.12 12.7 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 GAF domain HTH_24 PF13412.6 gi|300711615|ref|YP_003737429.1| - 0.18 11.4 1.0 2.2 7.9 0.0 2.9 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|300711615|ref|YP_003737429.1| - 0.19 11.6 1.6 0.52 10.2 0.0 2.6 3 0 0 3 3 3 0 Homeodomain-like domain HTH_31 PF13560.6 gi|300711615|ref|YP_003737429.1| - 2.4 8.6 10.2 5.2 7.5 0.1 5.0 4 1 1 5 5 5 0 Helix-turn-helix domain AMP-binding PF00501.28 gi|300711616|ref|YP_003737430.1| - 1.2e-86 290.9 0.2 1.6e-86 290.6 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711616|ref|YP_003737430.1| - 1.4e-24 86.8 0.9 2.7e-24 85.9 0.9 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|300711616|ref|YP_003737430.1| - 2.4e-12 46.6 4.1 2.4e-12 46.6 4.1 2.2 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus DUF287 PF03384.14 gi|300711616|ref|YP_003737430.1| - 0.27 11.6 1.8 23 5.4 0.5 3.0 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 DUF4212 PF13937.6 gi|300711617|ref|YP_003737431.1| - 7.9e-20 71.0 0.2 9.7e-20 70.7 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) SSF PF00474.17 gi|300711618|ref|YP_003737432.1| - 1.3e-47 162.6 37.1 2.3e-47 161.7 37.1 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family Usp PF00582.26 gi|300711619|ref|YP_003737433.1| - 1e-34 120.0 1.9 1.3e-34 119.7 1.9 1.1 1 0 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|300711619|ref|YP_003737433.1| - 0.0085 16.0 2.7 0.4 10.6 1.9 2.1 1 1 1 2 2 2 2 Electron transfer flavoprotein domain DUF2842 PF11003.8 gi|300711620|ref|YP_003737434.1| - 0.084 13.1 5.1 1.5 9.1 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2842) DUF3054 PF11255.8 gi|300711621|ref|YP_003737435.1| - 0.012 16.1 0.2 0.015 15.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) Trm56 PF01994.16 gi|300711622|ref|YP_003737436.1| - 2.7e-48 162.8 0.0 3.5e-48 162.4 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SPOUT_MTase_2 PF14419.6 gi|300711622|ref|YP_003737436.1| - 0.057 12.8 0.0 0.097 12.0 0.0 1.4 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP HTH_20 PF12840.7 gi|300711623|ref|YP_003737437.1| - 0.00029 20.8 0.9 0.00067 19.7 0.9 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain DUF5457 PF17540.2 gi|300711623|ref|YP_003737437.1| - 0.0093 16.1 0.0 0.014 15.5 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5457) HTH_IclR PF09339.10 gi|300711623|ref|YP_003737437.1| - 0.056 13.3 2.7 0.073 12.9 0.2 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain GntR PF00392.21 gi|300711623|ref|YP_003737437.1| - 0.089 12.5 0.8 0.19 11.4 0.8 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|300711623|ref|YP_003737437.1| - 0.16 11.8 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rhomboid PF01694.22 gi|300711623|ref|YP_003737437.1| - 0.57 10.2 8.7 1.2 9.1 8.9 1.5 1 1 0 1 1 1 0 Rhomboid family TFIIE_alpha PF02002.17 gi|300711624|ref|YP_003737438.1| - 4e-20 71.6 0.0 1.8e-19 69.6 0.0 1.8 2 0 0 2 2 2 1 TFIIE alpha subunit DNA_ligase_ZBD PF03119.16 gi|300711624|ref|YP_003737438.1| - 0.013 15.5 0.1 0.027 14.5 0.1 1.6 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Sigma70_r3 PF04539.16 gi|300711624|ref|YP_003737438.1| - 0.023 14.8 1.6 0.04 14.0 0.0 2.2 2 0 0 2 2 2 0 Sigma-70 region 3 HypA PF01155.19 gi|300711624|ref|YP_003737438.1| - 0.023 14.7 0.1 0.034 14.2 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|300711624|ref|YP_003737438.1| - 0.035 13.5 0.1 0.061 12.8 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|300711624|ref|YP_003737438.1| - 0.038 14.1 2.0 0.078 13.1 2.0 1.6 1 0 0 1 1 1 0 Zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|300711624|ref|YP_003737438.1| - 0.048 13.6 0.2 0.083 12.9 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbons NRDD PF13597.6 gi|300711624|ref|YP_003737438.1| - 0.071 11.9 0.0 0.088 11.6 0.0 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Rad50_zn_hook PF04423.14 gi|300711624|ref|YP_003737438.1| - 0.094 12.6 1.1 0.22 11.4 0.1 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-Mss51 PF13824.6 gi|300711624|ref|YP_003737438.1| - 0.16 12.1 1.7 0.55 10.4 1.3 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF2110 PF09883.9 gi|300711625|ref|YP_003737439.1| - 1.6e-93 312.4 0.0 1.8e-93 312.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) GNAT_like PF18407.1 gi|300711625|ref|YP_003737439.1| - 0.97 9.8 4.3 1.2 9.5 0.3 2.7 3 0 0 3 3 3 0 GCN5-related N-acetyltransferase like domain LapA_dom PF06305.11 gi|300711626|ref|YP_003737440.1| - 0.11 12.3 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain XK-related PF09815.9 gi|300711626|ref|YP_003737440.1| - 0.16 11.0 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 XK-related protein MoCF_biosynth PF00994.24 gi|300711627|ref|YP_003737441.1| - 1.7e-34 118.6 0.2 2.4e-34 118.1 0.2 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain NAD_kinase PF01513.21 gi|300711629|ref|YP_003737443.1| - 1.2e-47 162.6 0.0 1.6e-47 162.1 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|300711629|ref|YP_003737443.1| - 5.2e-07 29.3 0.1 5.2e-07 29.3 0.1 2.2 3 0 0 3 3 3 1 Diacylglycerol kinase catalytic domain PFK PF00365.20 gi|300711629|ref|YP_003737443.1| - 0.062 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphofructokinase PhoU PF01895.19 gi|300711630|ref|YP_003737444.1| - 2.1e-15 57.0 10.6 2.5e-13 50.3 0.1 2.5 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|300711630|ref|YP_003737444.1| - 2.5e-08 33.7 0.0 5.5e-08 32.6 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Chalcone_2 PF16035.5 gi|300711630|ref|YP_003737444.1| - 0.036 13.8 0.0 0.074 12.8 0.0 1.5 1 0 0 1 1 1 0 Chalcone isomerase like G_glu_transpept PF01019.21 gi|300711631|ref|YP_003737445.1| - 3.7e-145 484.6 0.0 4.2e-145 484.4 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase ABC_membrane PF00664.23 gi|300711632|ref|YP_003737446.1| - 1.5e-44 152.7 5.3 1.9e-44 152.4 5.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|300711632|ref|YP_003737446.1| - 5.6e-34 117.6 0.0 1.1e-33 116.7 0.0 1.5 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|300711632|ref|YP_003737446.1| - 0.00093 19.1 0.0 0.0018 18.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|300711632|ref|YP_003737446.1| - 0.0013 19.0 0.4 0.019 15.2 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|300711632|ref|YP_003737446.1| - 0.0017 18.1 0.2 0.0062 16.3 0.2 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|300711632|ref|YP_003737446.1| - 0.0024 17.4 0.3 0.18 11.2 0.1 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|300711632|ref|YP_003737446.1| - 0.003 17.4 0.1 0.012 15.5 0.0 1.7 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300711632|ref|YP_003737446.1| - 0.0053 17.1 0.8 0.017 15.5 0.8 1.9 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|300711632|ref|YP_003737446.1| - 0.011 15.9 0.0 0.027 14.6 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.6 gi|300711632|ref|YP_003737446.1| - 0.016 14.9 0.0 0.037 13.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|300711632|ref|YP_003737446.1| - 0.025 15.1 0.0 0.054 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|300711632|ref|YP_003737446.1| - 0.033 14.2 0.1 0.34 10.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 gi|300711632|ref|YP_003737446.1| - 0.043 13.5 0.2 2.5 7.8 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF2107 PF09880.9 gi|300711632|ref|YP_003737446.1| - 0.054 13.6 1.4 0.18 12.0 1.4 1.9 1 0 0 1 1 1 0 Predicted membrane protein (DUF2107) AAA_18 PF13238.6 gi|300711632|ref|YP_003737446.1| - 0.059 13.9 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|300711632|ref|YP_003737446.1| - 0.077 12.3 0.1 0.2 10.9 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin AAA PF00004.29 gi|300711632|ref|YP_003737446.1| - 0.078 13.4 0.0 0.59 10.6 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|300711632|ref|YP_003737446.1| - 0.11 11.9 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|300711632|ref|YP_003737446.1| - 0.14 12.1 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_19 PF13245.6 gi|300711632|ref|YP_003737446.1| - 0.21 11.9 1.0 3.1 8.1 1.0 2.2 1 1 0 1 1 1 0 AAA domain ACR_tran PF00873.19 gi|300711632|ref|YP_003737446.1| - 0.28 8.8 3.6 0.52 7.9 1.4 2.1 2 0 0 2 2 2 0 AcrB/AcrD/AcrF family YHS PF04945.13 gi|300711633|ref|YP_003737447.1| - 2e-08 34.2 7.3 1.7e-07 31.2 5.5 2.0 1 1 1 2 2 2 1 YHS domain zf-FCS PF06467.14 gi|300711633|ref|YP_003737447.1| - 0.01 15.7 0.6 0.027 14.4 0.1 1.9 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Arc_trans_TRASH PF08394.10 gi|300711633|ref|YP_003737447.1| - 0.026 14.8 2.7 0.039 14.3 0.2 2.0 2 0 0 2 2 2 0 Archaeal TRASH domain DNA_ligase_ZBD PF03119.16 gi|300711633|ref|YP_003737447.1| - 0.13 12.3 5.2 0.5 10.4 5.2 1.8 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Acyl-CoA_dh_1 PF00441.24 gi|300711634|ref|YP_003737448.1| - 1.4e-44 152.0 0.8 1.9e-44 151.5 0.8 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300711634|ref|YP_003737448.1| - 6.6e-38 129.8 0.1 1.4e-37 128.8 0.1 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711634|ref|YP_003737448.1| - 7.3e-26 90.2 0.0 1.2e-25 89.5 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|300711634|ref|YP_003737448.1| - 1.2e-16 61.2 1.9 1.8e-16 60.6 1.9 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|300711634|ref|YP_003737448.1| - 0.12 12.9 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal RIO1 PF01163.22 gi|300711635|ref|YP_003737449.1| - 1.5e-07 31.2 0.0 2.4e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|300711635|ref|YP_003737449.1| - 1e-06 28.9 0.4 0.0096 15.9 0.0 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|300711635|ref|YP_003737449.1| - 0.00017 21.0 0.0 0.00023 20.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-PolyVal PF18762.1 gi|300711635|ref|YP_003737449.1| - 0.027 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins Kdo PF06293.14 gi|300711635|ref|YP_003737449.1| - 0.031 13.6 0.4 0.23 10.8 0.4 2.2 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Aldedh PF00171.22 gi|300711636|ref|YP_003737450.1| - 7.7e-143 476.3 0.0 8.7e-143 476.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|300711636|ref|YP_003737450.1| - 0.042 12.9 0.0 0.076 12.0 0.0 1.4 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) OmdA PF13376.6 gi|300711636|ref|YP_003737450.1| - 0.089 12.8 0.4 0.18 11.8 0.4 1.4 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated CN_hydrolase PF00795.22 gi|300711637|ref|YP_003737451.1| - 3.4e-45 154.4 0.0 3.8e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF364 PF04016.12 gi|300711637|ref|YP_003737451.1| - 0.008 15.8 0.0 0.019 14.6 0.0 1.6 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF3875 PF12991.7 gi|300711637|ref|YP_003737451.1| - 0.11 12.5 0.2 9.2 6.3 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function, B. Theta Gene description (DUF3875) Polyketide_cyc2 PF10604.9 gi|300711638|ref|YP_003737452.1| - 4.2e-20 72.5 0.9 4.7e-20 72.3 0.9 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport COXG PF06240.13 gi|300711638|ref|YP_003737452.1| - 3.3e-06 26.9 0.0 3.9e-06 26.7 0.0 1.2 1 1 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc PF03364.20 gi|300711638|ref|YP_003737452.1| - 0.0021 18.3 0.1 0.0027 17.9 0.1 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2505 PF10698.9 gi|300711638|ref|YP_003737452.1| - 0.033 14.3 0.2 1.2 9.3 0.2 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2505) LRV_FeS PF05484.11 gi|300711638|ref|YP_003737452.1| - 0.047 13.7 0.0 0.094 12.7 0.0 1.4 1 0 0 1 1 1 0 LRV protein FeS4 cluster Put_DNA-bind_N PF06971.13 gi|300711639|ref|YP_003737453.1| - 0.0021 18.1 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus FaeA PF04703.12 gi|300711639|ref|YP_003737453.1| - 0.0093 16.3 0.0 0.011 16.1 0.0 1.1 1 0 0 1 1 1 1 FaeA-like protein LexA_DNA_bind PF01726.16 gi|300711639|ref|YP_003737453.1| - 0.024 14.4 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_AsnC-type PF13404.6 gi|300711639|ref|YP_003737453.1| - 0.027 14.3 0.4 0.19 11.6 0.4 2.1 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_36 PF13730.6 gi|300711639|ref|YP_003737453.1| - 0.041 13.8 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain ELFV_dehydrog PF00208.21 gi|300711641|ref|YP_003737455.1| - 1.8e-71 240.7 0.1 2.3e-71 240.4 0.1 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|300711641|ref|YP_003737455.1| - 7.1e-52 174.7 0.0 1.3e-51 173.9 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|300711641|ref|YP_003737455.1| - 0.05 13.0 1.0 0.11 11.9 0.0 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HpcH_HpaI PF03328.14 gi|300711642|ref|YP_003737456.1| - 2.4e-55 187.1 0.3 3.1e-55 186.7 0.3 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|300711642|ref|YP_003737456.1| - 3.7e-09 36.2 0.0 2.8e-05 23.5 0.0 2.3 2 1 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold SNARE_assoc PF09335.11 gi|300711643|ref|YP_003737457.1| - 5.2e-13 49.5 3.1 5.2e-13 49.5 3.1 1.4 1 1 0 1 1 1 1 SNARE associated Golgi protein MaoC_dehydratas PF01575.19 gi|300711644|ref|YP_003737458.1| - 5.2e-26 90.6 0.0 7.1e-26 90.2 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|300711644|ref|YP_003737458.1| - 2.1e-05 24.7 0.1 9.2e-05 22.6 0.1 1.8 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase Carboxyl_trans PF01039.22 gi|300711646|ref|YP_003737460.1| - 5e-127 424.5 0.0 6e-127 424.3 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain DUF5562 PF17717.1 gi|300711647|ref|YP_003737461.1| - 0.008 16.2 0.6 0.0082 16.1 0.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5562) baeRF_family10 PF18854.1 gi|300711648|ref|YP_003737462.1| - 3e-16 59.9 1.3 4e-16 59.5 0.2 1.8 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_3 PF03465.15 gi|300711648|ref|YP_003737462.1| - 2.1e-15 57.2 0.4 1.7e-14 54.2 0.4 2.5 2 1 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|300711648|ref|YP_003737462.1| - 1.3e-08 35.3 0.0 6.4e-08 33.0 0.0 2.2 1 1 0 1 1 1 1 eRF1 domain 2 acVLRF1 PF18859.1 gi|300711648|ref|YP_003737462.1| - 0.0035 17.6 3.9 0.62 10.4 0.5 3.2 3 1 0 3 3 3 2 Actinobacteria/chloroflexi VLRF1 release factor TOBE PF03459.17 gi|300711648|ref|YP_003737462.1| - 0.062 13.6 0.3 0.13 12.6 0.3 1.6 1 0 0 1 1 1 0 TOBE domain Cupin_2 PF07883.11 gi|300711649|ref|YP_003737463.1| - 7e-13 48.1 0.0 9.3e-13 47.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|300711649|ref|YP_003737463.1| - 3.9e-05 23.6 0.0 5.5e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.12 gi|300711649|ref|YP_003737463.1| - 0.0013 18.5 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 gi|300711649|ref|YP_003737463.1| - 0.015 15.0 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) R2K_3 PF14243.6 gi|300711649|ref|YP_003737463.1| - 0.047 13.7 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 FBPase PF00316.20 gi|300711650|ref|YP_003737464.1| - 1.5e-18 67.0 0.0 2.2e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Inositol_P PF00459.25 gi|300711650|ref|YP_003737464.1| - 0.00061 19.4 0.0 0.0014 18.2 0.0 1.6 2 0 0 2 2 2 1 Inositol monophosphatase family DeoC PF01791.9 gi|300711651|ref|YP_003737465.1| - 1.7e-41 142.4 0.0 2e-41 142.1 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Glyco_hydro_3_C PF01915.22 gi|300711651|ref|YP_003737465.1| - 0.022 14.7 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain PucR PF07905.11 gi|300711651|ref|YP_003737465.1| - 0.067 13.5 0.0 0.29 11.4 0.0 1.9 1 1 1 2 2 2 0 Purine catabolism regulatory protein-like family DUF561 PF04481.12 gi|300711651|ref|YP_003737465.1| - 0.19 10.8 0.0 0.29 10.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF561) 3HCDH_N PF02737.18 gi|300711652|ref|YP_003737466.1| - 5.8e-62 208.8 1.5 7.6e-62 208.4 1.5 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|300711652|ref|YP_003737466.1| - 2e-32 111.7 0.1 8.2e-32 109.7 0.0 2.0 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|300711652|ref|YP_003737466.1| - 0.00016 21.9 1.1 0.0003 21.0 1.1 1.6 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase adh_short_C2 PF13561.6 gi|300711652|ref|YP_003737466.1| - 0.00018 21.2 0.9 0.00031 20.4 0.9 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase F420_oxidored PF03807.17 gi|300711652|ref|YP_003737466.1| - 0.0023 18.5 0.4 0.0056 17.2 0.4 1.9 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|300711652|ref|YP_003737466.1| - 0.0071 15.9 0.3 0.013 15.0 0.2 1.5 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|300711652|ref|YP_003737466.1| - 0.01 15.2 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|300711652|ref|YP_003737466.1| - 0.012 15.6 0.1 0.021 14.8 0.1 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 gi|300711652|ref|YP_003737466.1| - 0.55 10.5 6.1 1 9.6 0.2 2.9 1 1 2 3 3 3 0 TrkA-N domain SQS_PSY PF00494.19 gi|300711654|ref|YP_003737468.1| - 1.3e-51 175.7 0.3 1.5e-51 175.4 0.3 1.1 1 0 0 1 1 1 1 Squalene/phytoene synthase Acyl-CoA_dh_1 PF00441.24 gi|300711655|ref|YP_003737469.1| - 4.2e-50 169.8 0.7 6.1e-50 169.3 0.7 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300711655|ref|YP_003737469.1| - 1.9e-37 128.4 0.3 6.9e-37 126.6 0.1 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|300711655|ref|YP_003737469.1| - 2.8e-26 92.4 0.6 4.5e-26 91.7 0.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711655|ref|YP_003737469.1| - 1e-23 83.3 0.0 1.8e-23 82.6 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain DUF743 PF05332.11 gi|300711655|ref|YP_003737469.1| - 0.029 14.4 0.2 0.049 13.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF743) Peptidase_M23 PF01551.22 gi|300711656|ref|YP_003737470.1| - 5e-18 65.1 0.0 9.3e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M23 Thiolase_N PF00108.23 gi|300711658|ref|YP_003737472.1| - 1.4e-28 100.0 0.2 2.6e-28 99.1 0.2 1.5 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|300711658|ref|YP_003737472.1| - 5.2e-11 42.6 5.5 3.7e-10 39.8 0.7 2.8 2 1 1 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain Thiolase_C PF02803.18 gi|300711658|ref|YP_003737472.1| - 4.5e-08 32.8 0.4 1.2e-07 31.4 0.4 1.7 1 0 0 1 1 1 1 Thiolase, C-terminal domain Ketoacyl-synt_C PF02801.22 gi|300711658|ref|YP_003737472.1| - 0.0089 16.0 0.6 0.56 10.2 0.1 3.1 3 0 0 3 3 3 1 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|300711658|ref|YP_003737472.1| - 0.026 14.4 0.7 0.81 9.6 0.1 2.7 2 1 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OB_aCoA_assoc PF01796.17 gi|300711659|ref|YP_003737473.1| - 3.2e-11 43.1 3.7 4.5e-11 42.6 3.7 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|300711659|ref|YP_003737473.1| - 1.4e-05 24.8 0.6 2.4e-05 24.1 0.6 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|300711659|ref|YP_003737473.1| - 0.099 12.8 0.7 0.19 11.9 0.7 1.5 1 1 0 1 1 1 0 Zinc ribbon domain DUF1936 PF09151.10 gi|300711659|ref|YP_003737473.1| - 0.13 12.2 0.9 0.6 10.1 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) Abhydrolase_6 PF12697.7 gi|300711660|ref|YP_003737474.1| - 1e-19 72.0 4.0 1.6e-19 71.4 4.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300711660|ref|YP_003737474.1| - 4.9e-09 36.2 0.0 1.2e-08 35.0 0.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|300711660|ref|YP_003737474.1| - 2.3e-05 23.8 0.0 3.4e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 MeaB PF03308.16 gi|300711662|ref|YP_003737476.1| - 8.8e-92 306.9 4.5 1.2e-91 306.4 4.5 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|300711662|ref|YP_003737476.1| - 4.3e-08 32.9 1.4 6.9e-07 29.0 1.4 2.4 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|300711662|ref|YP_003737476.1| - 2.2e-06 28.1 0.3 0.00011 22.6 0.1 2.3 2 0 0 2 2 2 1 AAA ATPase domain SRP54 PF00448.22 gi|300711662|ref|YP_003737476.1| - 5.3e-06 26.2 0.5 2.1e-05 24.3 0.5 1.9 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|300711662|ref|YP_003737476.1| - 2.3e-05 24.2 0.1 5.1e-05 23.1 0.1 1.6 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|300711662|ref|YP_003737476.1| - 3e-05 24.0 0.2 7.5e-05 22.7 0.1 1.7 2 0 0 2 2 2 1 NTPase ATP_bind_1 PF03029.17 gi|300711662|ref|YP_003737476.1| - 4.5e-05 23.3 0.1 0.0008 19.3 0.1 2.1 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein CbiA PF01656.23 gi|300711662|ref|YP_003737476.1| - 0.00015 21.8 0.0 0.00023 21.2 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain RsgA_GTPase PF03193.16 gi|300711662|ref|YP_003737476.1| - 0.00026 20.9 0.0 0.034 14.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 gi|300711662|ref|YP_003737476.1| - 0.00034 21.1 0.0 0.00057 20.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_18 PF13238.6 gi|300711662|ref|YP_003737476.1| - 0.0015 19.0 0.4 0.0066 17.0 0.1 2.2 2 1 0 2 2 2 1 AAA domain GTP_EFTU PF00009.27 gi|300711662|ref|YP_003737476.1| - 0.0019 17.8 0.1 1.2 8.7 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain MobB PF03205.14 gi|300711662|ref|YP_003737476.1| - 0.0022 17.9 0.0 0.0053 16.7 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.6 gi|300711662|ref|YP_003737476.1| - 0.0024 17.6 0.1 0.005 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.6 gi|300711662|ref|YP_003737476.1| - 0.0043 17.5 0.6 0.065 13.7 0.1 2.6 2 1 1 3 3 3 1 AAA domain PRK PF00485.18 gi|300711662|ref|YP_003737476.1| - 0.0053 16.5 0.1 0.01 15.6 0.1 1.4 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 gi|300711662|ref|YP_003737476.1| - 0.006 16.9 0.0 0.014 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain KAP_NTPase PF07693.14 gi|300711662|ref|YP_003737476.1| - 0.0061 15.8 0.0 0.0061 15.8 0.0 1.2 1 0 0 1 1 1 1 KAP family P-loop domain MMR_HSR1 PF01926.23 gi|300711662|ref|YP_003737476.1| - 0.0063 16.6 0.4 0.031 14.4 0.4 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|300711662|ref|YP_003737476.1| - 0.0085 16.3 0.1 0.026 14.8 0.1 1.8 1 0 0 1 1 1 1 AAA domain Ploopntkinase3 PF18751.1 gi|300711662|ref|YP_003737476.1| - 0.011 15.6 0.1 0.021 14.8 0.1 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 KTI12 PF08433.10 gi|300711662|ref|YP_003737476.1| - 0.014 14.9 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Zeta_toxin PF06414.12 gi|300711662|ref|YP_003737476.1| - 0.019 14.3 0.1 0.041 13.1 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 gi|300711662|ref|YP_003737476.1| - 0.019 15.1 0.0 0.046 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|300711662|ref|YP_003737476.1| - 0.027 13.6 0.0 0.072 12.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NB-ARC PF00931.22 gi|300711662|ref|YP_003737476.1| - 0.041 13.1 0.0 0.077 12.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|300711662|ref|YP_003737476.1| - 0.045 13.7 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 gi|300711662|ref|YP_003737476.1| - 0.054 13.5 0.1 0.19 11.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|300711662|ref|YP_003737476.1| - 0.079 12.5 0.1 0.2 11.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain LpxK PF02606.14 gi|300711662|ref|YP_003737476.1| - 0.13 11.3 0.1 0.27 10.3 0.1 1.4 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase RNA_helicase PF00910.22 gi|300711662|ref|YP_003737476.1| - 0.15 12.5 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Viral_helicase1 PF01443.18 gi|300711662|ref|YP_003737476.1| - 0.2 11.4 0.1 0.37 10.5 0.1 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase B12-binding PF02310.19 gi|300711663|ref|YP_003737477.1| - 3.7e-22 78.6 0.3 4.3e-22 78.4 0.3 1.1 1 0 0 1 1 1 1 B12 binding domain Staph_haemo PF05480.11 gi|300711663|ref|YP_003737477.1| - 0.017 14.9 0.1 0.032 14.0 0.1 1.5 1 0 0 1 1 1 0 Staphylococcus haemolytic protein DUF1611_N PF17396.2 gi|300711663|ref|YP_003737477.1| - 0.027 14.7 0.0 0.3 11.3 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain IMPDH PF00478.25 gi|300711663|ref|YP_003737477.1| - 0.029 13.4 0.0 0.036 13.1 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain MFS_MOT1 PF16983.5 gi|300711664|ref|YP_003737478.1| - 8.3e-41 138.9 42.9 7.9e-23 81.0 10.5 3.8 4 0 0 4 4 4 2 Molybdate transporter of MFS superfamily ABC2_membrane PF01061.24 gi|300711666|ref|YP_003737480.1| - 6.2e-21 74.8 10.2 6.2e-21 74.8 10.2 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|300711666|ref|YP_003737480.1| - 7.4e-13 48.3 4.5 7.4e-13 48.3 4.5 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein OppC_N PF12911.7 gi|300711666|ref|YP_003737480.1| - 0.014 15.4 0.3 0.014 15.4 0.3 3.2 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C AcrZ PF10766.9 gi|300711666|ref|YP_003737480.1| - 2.2 7.9 5.5 0.6 9.7 0.8 2.3 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ ABC_tran PF00005.27 gi|300711667|ref|YP_003737481.1| - 4.3e-29 101.8 0.0 6.5e-29 101.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|300711667|ref|YP_003737481.1| - 1e-14 55.1 0.0 9.1e-08 32.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|300711667|ref|YP_003737481.1| - 3.4e-05 24.5 0.0 4.6e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|300711667|ref|YP_003737481.1| - 0.00016 21.3 0.1 0.00038 20.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|300711667|ref|YP_003737481.1| - 0.0002 21.2 0.0 0.15 11.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|300711667|ref|YP_003737481.1| - 0.0021 18.0 0.0 0.0033 17.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|300711667|ref|YP_003737481.1| - 0.0024 17.6 0.2 0.013 15.2 0.1 2.0 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 gi|300711667|ref|YP_003737481.1| - 0.0031 17.5 0.2 0.018 15.1 0.0 2.0 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 gi|300711667|ref|YP_003737481.1| - 0.0059 16.9 0.3 0.013 15.8 0.3 1.5 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|300711667|ref|YP_003737481.1| - 0.0096 15.7 0.0 0.095 12.4 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|300711667|ref|YP_003737481.1| - 0.012 16.0 0.1 0.019 15.4 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF4162 PF13732.6 gi|300711667|ref|YP_003737481.1| - 0.013 16.2 0.0 0.02 15.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) AAA_22 PF13401.6 gi|300711667|ref|YP_003737481.1| - 0.019 15.2 0.0 0.034 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|300711667|ref|YP_003737481.1| - 0.027 14.9 0.0 0.062 13.7 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|300711667|ref|YP_003737481.1| - 0.034 14.2 0.1 0.081 13.0 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|300711667|ref|YP_003737481.1| - 0.048 13.8 0.1 0.087 13.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain Glyco_hydro_20b PF02838.15 gi|300711667|ref|YP_003737481.1| - 0.061 14.1 0.1 0.098 13.4 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 SMC_N PF02463.19 gi|300711667|ref|YP_003737481.1| - 0.071 12.5 0.0 0.19 11.1 0.0 1.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 gi|300711667|ref|YP_003737481.1| - 0.073 12.6 0.3 0.19 11.3 0.3 1.7 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|300711667|ref|YP_003737481.1| - 0.079 12.3 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI cobW PF02492.19 gi|300711667|ref|YP_003737481.1| - 0.12 12.0 0.1 0.23 11.1 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_27 PF13514.6 gi|300711667|ref|YP_003737481.1| - 0.14 11.7 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|300711667|ref|YP_003737481.1| - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 gi|300711667|ref|YP_003737481.1| - 0.24 11.1 0.0 0.49 10.1 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation BPD_transp_1 PF00528.22 gi|300711668|ref|YP_003737482.1| - 1.6e-21 76.9 17.8 1.6e-21 76.9 17.8 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|300711669|ref|YP_003737483.1| - 1.3e-15 57.7 18.7 1.3e-15 57.7 18.7 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Caveolin PF01146.17 gi|300711669|ref|YP_003737483.1| - 0.17 11.9 2.4 0.54 10.2 2.4 2.0 1 0 0 1 1 1 0 Caveolin DUF4064 PF13273.6 gi|300711669|ref|YP_003737483.1| - 9.7 6.5 23.9 0.33 11.2 5.7 3.6 1 1 2 3 3 3 0 Protein of unknown function (DUF4064) PBP_like_2 PF12849.7 gi|300711670|ref|YP_003737484.1| - 1.4e-28 100.4 2.0 4.1e-28 98.9 2.0 1.7 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|300711670|ref|YP_003737484.1| - 6.1e-17 61.4 0.0 1e-16 60.6 0.0 1.4 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|300711670|ref|YP_003737484.1| - 0.021 14.8 0.1 0.037 14.0 0.1 1.6 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein Aldo_ket_red PF00248.21 gi|300711671|ref|YP_003737485.1| - 4.6e-71 239.4 0.0 5.6e-71 239.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Gate PF07670.14 gi|300711672|ref|YP_003737486.1| - 0.0041 17.4 5.0 0.01 16.1 5.0 1.6 1 0 0 1 1 1 1 Nucleoside recognition UbiA PF01040.18 gi|300711673|ref|YP_003737487.1| - 1.2e-56 191.8 22.8 1.2e-56 191.8 22.8 2.7 2 1 0 2 2 2 1 UbiA prenyltransferase family COX15-CtaA PF02628.15 gi|300711673|ref|YP_003737487.1| - 1.8e-08 33.9 12.3 1.8e-06 27.3 4.4 3.6 2 2 1 3 3 3 2 Cytochrome oxidase assembly protein EI24 PF07264.11 gi|300711673|ref|YP_003737487.1| - 0.33 11.2 17.8 2.2e+02 2.0 17.8 3.3 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Ldr_toxin PF13940.6 gi|300711673|ref|YP_003737487.1| - 1.5 8.9 5.8 0.98 9.5 1.9 2.8 2 0 0 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Melittin PF01372.17 gi|300711673|ref|YP_003737487.1| - 4 7.6 8.1 17 5.6 0.5 4.0 3 0 0 3 3 3 0 Melittin COX2 PF00116.20 gi|300711674|ref|YP_003737488.1| - 5e-14 52.2 0.0 1.1e-13 51.1 0.0 1.5 1 1 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 gi|300711674|ref|YP_003737488.1| - 9e-12 45.0 0.2 2.3e-11 43.7 0.1 1.7 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, transmembrane domain CCSMST1 PF15013.6 gi|300711674|ref|YP_003737488.1| - 0.019 15.1 0.0 0.037 14.2 0.0 1.5 1 0 0 1 1 1 0 CCSMST1 family Cupredoxin_1 PF13473.6 gi|300711674|ref|YP_003737488.1| - 0.043 13.9 0.0 0.11 12.6 0.0 1.8 1 1 0 1 1 1 0 Cupredoxin-like domain TrbC PF04956.13 gi|300711674|ref|YP_003737488.1| - 1.6 9.0 4.3 4.8 7.5 3.6 2.0 1 1 1 2 2 2 0 TrbC/VIRB2 family COX3 PF00510.18 gi|300711675|ref|YP_003737489.1| - 4e-35 121.9 19.8 5.3e-35 121.5 19.8 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III zf-C2H2 PF00096.26 gi|300711676|ref|YP_003737490.1| - 0.0026 18.1 0.1 0.0043 17.4 0.1 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-RING_7 PF02591.15 gi|300711676|ref|YP_003737490.1| - 0.034 14.3 0.5 0.14 12.4 0.3 1.9 2 0 0 2 2 2 0 C4-type zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|300711676|ref|YP_003737490.1| - 0.042 14.0 0.4 0.074 13.2 0.4 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Rad50_zn_hook PF04423.14 gi|300711676|ref|YP_003737490.1| - 0.066 13.1 0.4 0.89 9.4 0.1 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif zinc_ribbon_9 PF14369.6 gi|300711676|ref|YP_003737490.1| - 0.2 12.0 1.6 0.25 11.6 0.3 1.8 2 0 0 2 2 2 0 zinc-ribbon Cyt_c_ox_IV PF12270.8 gi|300711677|ref|YP_003737491.1| - 0.0078 16.3 0.9 0.0078 16.3 0.9 2.2 1 1 1 2 2 2 1 Cytochrome c oxidase subunit IV DUF3040 PF11239.8 gi|300711677|ref|YP_003737491.1| - 7.9 6.8 16.1 0.28 11.5 0.3 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3040) TRIQK PF15168.6 gi|300711678|ref|YP_003737492.1| - 9.9 6.1 6.1 28 4.7 0.2 2.0 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family COX1 PF00115.20 gi|300711679|ref|YP_003737493.1| - 9.4e-147 489.3 62.4 1.3e-146 488.9 62.4 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I AMP-binding PF00501.28 gi|300711682|ref|YP_003737496.1| - 7.8e-98 327.8 0.2 9.1e-98 327.6 0.2 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711682|ref|YP_003737496.1| - 3.4e-19 69.6 0.1 8.9e-19 68.3 0.1 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain UPF0242 PF06785.11 gi|300711683|ref|YP_003737497.1| - 0.018 15.2 0.2 0.031 14.4 0.2 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Med10 PF09748.9 gi|300711683|ref|YP_003737497.1| - 0.028 14.4 0.3 0.32 11.0 0.0 2.1 2 0 0 2 2 2 0 Transcription factor subunit Med10 of Mediator complex DUF641 PF04859.12 gi|300711683|ref|YP_003737497.1| - 0.066 13.6 0.9 4.5 7.6 0.1 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) THOC7 PF05615.13 gi|300711683|ref|YP_003737497.1| - 0.17 12.2 3.7 1.7 8.9 3.7 2.0 1 1 0 1 1 1 0 Tho complex subunit 7 MM_CoA_mutase PF01642.22 gi|300711684|ref|YP_003737498.1| - 4.4e-210 698.6 0.3 5e-210 698.4 0.3 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Met_asp_mut_E PF06368.11 gi|300711684|ref|YP_003737498.1| - 0.047 12.2 0.0 0.076 11.5 0.0 1.3 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) AMP-binding PF00501.28 gi|300711685|ref|YP_003737499.1| - 9.6e-76 255.0 0.0 1.4e-75 254.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711685|ref|YP_003737499.1| - 8.2e-21 74.8 1.3 1.9e-20 73.6 1.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|300711686|ref|YP_003737500.1| - 1.8e-34 119.1 4.8 2.7e-34 118.5 4.8 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300711686|ref|YP_003737500.1| - 6e-25 88.1 1.6 1.7e-24 86.7 0.2 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711686|ref|YP_003737500.1| - 2.8e-19 69.1 0.0 4.5e-19 68.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|300711686|ref|YP_003737500.1| - 1.6e-17 64.0 8.4 3.4e-17 63.0 8.4 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain MmgE_PrpD PF03972.14 gi|300711687|ref|YP_003737501.1| - 1.1e-97 327.4 7.2 1.3e-97 327.1 7.2 1.1 1 0 0 1 1 1 1 MmgE/PrpD family Peptidase_C27 PF05407.12 gi|300711687|ref|YP_003737501.1| - 0.0096 16.0 5.1 0.3 11.1 0.2 2.8 3 0 0 3 3 3 2 Rubella virus endopeptidase CBS PF00571.28 gi|300711688|ref|YP_003737502.1| - 8e-24 83.8 6.8 1.9e-11 44.2 0.1 2.9 3 0 0 3 3 3 2 CBS domain ParBc PF02195.18 gi|300711688|ref|YP_003737502.1| - 3.4e-10 40.1 0.1 9.6e-10 38.6 0.1 1.8 1 1 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|300711688|ref|YP_003737502.1| - 0.011 15.8 0.1 0.08 13.0 0.1 2.0 1 1 0 1 1 1 0 Putative ParB-like nuclease DHH PF01368.20 gi|300711689|ref|YP_003737503.1| - 2.1e-14 53.6 0.0 3.5e-14 52.9 0.0 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|300711689|ref|YP_003737503.1| - 3.1e-13 50.3 0.0 6.9e-13 49.2 0.0 1.6 1 0 0 1 1 1 1 DHHA1 domain TrkA_N PF02254.18 gi|300711689|ref|YP_003737503.1| - 1e-07 32.2 0.0 2.3e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain Proton_antipo_M PF00361.20 gi|300711690|ref|YP_003737504.1| - 1.1e-66 225.0 21.9 1.1e-66 225.0 21.9 1.7 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|300711690|ref|YP_003737504.1| - 3.6e-05 23.7 1.0 3.6e-05 23.7 1.0 2.9 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GET2 PF08690.10 gi|300711690|ref|YP_003737504.1| - 0.026 14.2 0.8 0.04 13.6 0.8 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Proton_antipo_M PF00361.20 gi|300711691|ref|YP_003737505.1| - 9.3e-71 238.4 28.8 1.8e-70 237.5 28.8 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 gi|300711691|ref|YP_003737505.1| - 0.00042 20.4 1.7 0.00042 20.4 1.7 3.6 2 1 1 3 3 3 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus RAMP4 PF06624.12 gi|300711691|ref|YP_003737505.1| - 0.0024 17.9 0.4 0.034 14.2 0.1 2.7 2 0 0 2 2 2 1 Ribosome associated membrane protein RAMP4 Proton_antipo_M PF00361.20 gi|300711692|ref|YP_003737506.1| - 7.1e-78 261.8 19.1 1.8e-77 260.5 19.1 1.7 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|300711692|ref|YP_003737506.1| - 2.9e-17 62.5 0.3 1.7e-16 60.0 0.3 2.5 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q2 PF00420.24 gi|300711693|ref|YP_003737507.1| - 8.5e-23 80.0 6.5 9.5e-23 79.8 6.5 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q3 PF00499.20 gi|300711694|ref|YP_003737508.1| - 0.032 13.9 0.2 0.039 13.7 0.2 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q3 PF00499.20 gi|300711695|ref|YP_003737509.1| - 4.8e-20 71.7 1.6 4.8e-20 71.7 1.6 1.4 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.6 gi|300711695|ref|YP_003737509.1| - 0.63 10.2 15.6 0.47 10.6 14.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4040) DUF1418 PF07214.12 gi|300711695|ref|YP_003737509.1| - 0.98 9.3 8.3 0.74 9.7 6.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1418) G3P_acyltransf PF02660.15 gi|300711695|ref|YP_003737509.1| - 1.6 8.8 10.3 1.9 8.5 10.3 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Fer4_7 PF12838.7 gi|300711696|ref|YP_003737510.1| - 1.6e-12 47.8 10.3 2.6e-12 47.1 10.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300711696|ref|YP_003737510.1| - 2.1e-12 46.3 9.6 1.4e-06 27.9 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|300711696|ref|YP_003737510.1| - 2.1e-10 41.4 2.7 4.9e-05 24.2 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|300711696|ref|YP_003737510.1| - 2.3e-09 37.2 8.7 3.3e-09 36.7 8.7 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300711696|ref|YP_003737510.1| - 5.5e-08 32.9 11.2 1.2e-07 31.8 11.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300711696|ref|YP_003737510.1| - 5.9e-07 29.5 10.9 1.5e-06 28.2 11.3 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|300711696|ref|YP_003737510.1| - 1.6e-05 25.3 12.5 0.0073 16.8 1.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300711696|ref|YP_003737510.1| - 1.7e-05 24.7 13.7 0.0057 16.7 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|300711696|ref|YP_003737510.1| - 2.3e-05 24.7 10.7 0.00091 19.6 12.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300711696|ref|YP_003737510.1| - 3.3e-05 23.7 11.5 0.0022 18.0 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300711696|ref|YP_003737510.1| - 0.0002 21.6 13.8 0.0042 17.5 4.2 2.2 1 1 1 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|300711696|ref|YP_003737510.1| - 0.00023 21.9 14.6 0.0038 18.0 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|300711696|ref|YP_003737510.1| - 0.003 17.7 10.0 0.14 12.4 1.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|300711696|ref|YP_003737510.1| - 0.048 13.8 8.2 0.21 11.8 8.4 1.8 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|300711696|ref|YP_003737510.1| - 0.29 11.7 12.9 2.2 8.9 3.2 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|300711696|ref|YP_003737510.1| - 0.41 11.5 10.5 0.79 10.6 1.7 2.3 1 1 0 2 2 2 0 4Fe-4S dicluster domain TNFR_c6 PF00020.18 gi|300711696|ref|YP_003737510.1| - 0.63 10.5 8.0 5.4 7.5 1.3 2.5 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region zf_PR_Knuckle PF18445.1 gi|300711696|ref|YP_003737510.1| - 5.4 6.9 7.2 23 4.9 1.3 2.6 2 0 0 2 2 2 0 PR zinc knuckle motif NADHdh PF00146.21 gi|300711697|ref|YP_003737511.1| - 3.3e-92 309.0 17.4 4.1e-92 308.7 17.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.19 gi|300711698|ref|YP_003737512.1| - 8.7e-86 287.4 0.0 1.6e-84 283.2 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|300711698|ref|YP_003737512.1| - 2.1e-33 115.6 0.3 3.9e-33 114.7 0.3 1.5 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|300711699|ref|YP_003737513.1| - 2.4e-21 75.9 0.2 3.5e-21 75.4 0.2 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|300711700|ref|YP_003737514.1| - 1.1e-30 105.6 0.7 1.4e-30 105.4 0.7 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF3325 PF11804.8 gi|300711700|ref|YP_003737514.1| - 2.8 8.1 11.5 0.15 12.2 2.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) AIRC PF00731.20 gi|300711701|ref|YP_003737515.1| - 2.6e-50 169.9 0.0 3.2e-50 169.6 0.0 1.1 1 0 0 1 1 1 1 AIR carboxylase ATP-grasp PF02222.22 gi|300711702|ref|YP_003737516.1| - 3.4e-50 170.0 0.0 5.2e-50 169.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|300711702|ref|YP_003737516.1| - 3.7e-15 55.4 0.0 8.9e-15 54.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|300711702|ref|YP_003737516.1| - 1.3e-07 31.9 0.0 1.8e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain 2-Hacid_dh_C PF02826.19 gi|300711702|ref|YP_003737516.1| - 5.6e-06 25.8 0.0 9.1e-06 25.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Dala_Dala_lig_C PF07478.13 gi|300711702|ref|YP_003737516.1| - 1.4e-05 24.7 0.1 6.7e-05 22.5 0.1 1.9 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|300711702|ref|YP_003737516.1| - 0.00018 21.2 0.0 0.00045 19.9 0.0 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.19 gi|300711702|ref|YP_003737516.1| - 0.0018 18.1 0.0 0.0028 17.4 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_2 PF08442.10 gi|300711702|ref|YP_003737516.1| - 0.0082 15.7 0.0 0.019 14.5 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain 3HCDH_N PF02737.18 gi|300711702|ref|YP_003737516.1| - 0.0085 16.0 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ATP-grasp_5 PF13549.6 gi|300711702|ref|YP_003737516.1| - 0.013 14.9 0.0 0.034 13.6 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain XdhC_C PF13478.6 gi|300711702|ref|YP_003737516.1| - 0.014 15.9 0.0 0.037 14.5 0.0 1.8 1 1 0 1 1 1 0 XdhC Rossmann domain CPSase_L_D2 PF02786.17 gi|300711702|ref|YP_003737516.1| - 0.018 14.6 0.2 0.027 14.0 0.2 1.4 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain TraB PF01963.17 gi|300711702|ref|YP_003737516.1| - 0.037 13.9 0.2 0.061 13.2 0.2 1.4 1 1 0 1 1 1 0 TraB family F420_oxidored PF03807.17 gi|300711702|ref|YP_003737516.1| - 0.25 11.9 1.7 1.5 9.5 0.1 3.1 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Sulfatase PF00884.23 gi|300711703|ref|YP_003737517.1| - 5.5e-54 183.6 0.1 7.1e-54 183.3 0.1 1.1 1 0 0 1 1 1 1 Sulfatase DUF4976 PF16347.5 gi|300711703|ref|YP_003737517.1| - 8.3e-13 48.5 0.0 1.4e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 gi|300711703|ref|YP_003737517.1| - 2.9e-06 27.1 0.0 1.4e-05 24.9 0.0 2.0 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|300711704|ref|YP_003737518.1| - 2.1e-46 158.8 0.1 2.6e-46 158.4 0.1 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|300711704|ref|YP_003737518.1| - 6e-11 42.5 2.4 1.9e-05 24.4 1.8 2.4 2 1 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 gi|300711704|ref|YP_003737518.1| - 0.00083 19.2 0.0 0.053 13.4 0.0 2.9 2 1 1 3 3 3 1 Domain of unknown function DUF4976 PF16347.5 gi|300711704|ref|YP_003737518.1| - 0.0046 17.2 0.0 0.0094 16.2 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) DUF1501 PF07394.12 gi|300711704|ref|YP_003737518.1| - 0.067 12.2 0.0 0.14 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Sulfatase_C PF14707.6 gi|300711704|ref|YP_003737518.1| - 0.079 13.7 0.2 0.37 11.5 0.1 2.0 2 0 0 2 2 2 0 C-terminal region of aryl-sulfatase DUF229 PF02995.17 gi|300711704|ref|YP_003737518.1| - 0.23 10.0 0.0 0.33 9.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF229) Glyco_transf_20 PF00982.21 gi|300711706|ref|YP_003737520.1| - 5e-125 417.9 0.0 6.4e-125 417.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Glycos_transf_1 PF00534.20 gi|300711706|ref|YP_003737520.1| - 0.00069 19.2 0.0 0.012 15.2 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300711706|ref|YP_003737520.1| - 0.0055 17.1 0.0 0.011 16.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|300711706|ref|YP_003737520.1| - 0.059 13.8 0.1 0.19 12.1 0.1 1.9 1 0 0 1 1 1 0 Glycosyl transferases group 1 Trehalose_PPase PF02358.16 gi|300711707|ref|YP_003737521.1| - 4.5e-38 130.7 0.0 5.7e-38 130.4 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 gi|300711707|ref|YP_003737521.1| - 0.00085 19.1 0.0 0.004 16.9 0.0 1.9 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase A2L_zn_ribbon PF08792.10 gi|300711708|ref|YP_003737522.1| - 3.3e-05 23.5 0.2 3.9e-05 23.2 0.2 1.1 1 0 0 1 1 1 1 A2L zinc ribbon domain DZR PF12773.7 gi|300711708|ref|YP_003737522.1| - 0.0035 17.3 0.8 0.0043 17.1 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon Auto_anti-p27 PF06677.12 gi|300711708|ref|YP_003737522.1| - 0.01 16.0 2.6 0.013 15.6 2.6 1.2 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) C1_2 PF03107.16 gi|300711708|ref|YP_003737522.1| - 0.027 14.8 0.4 0.032 14.5 0.4 1.1 1 0 0 1 1 1 0 C1 domain NOB1_Zn_bind PF08772.11 gi|300711708|ref|YP_003737522.1| - 0.037 14.2 0.2 0.045 13.9 0.2 1.1 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like HypA PF01155.19 gi|300711708|ref|YP_003737522.1| - 0.059 13.4 0.6 0.065 13.3 0.6 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-trcl PF13451.6 gi|300711708|ref|YP_003737522.1| - 0.18 11.7 3.3 1.4 8.8 0.2 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain DUF2201_N PF13203.6 gi|300711709|ref|YP_003737523.1| - 0.0073 15.9 0.0 0.015 14.9 0.0 1.6 1 1 0 1 1 1 1 Putative metallopeptidase domain SDA1 PF05285.12 gi|300711709|ref|YP_003737523.1| - 0.052 13.0 37.7 0.06 12.8 37.7 1.2 1 0 0 1 1 1 0 SDA1 Zip PF02535.22 gi|300711709|ref|YP_003737523.1| - 0.082 12.1 5.1 0.11 11.8 5.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter BUD22 PF09073.10 gi|300711709|ref|YP_003737523.1| - 0.56 9.5 35.1 0.66 9.3 35.1 1.2 1 0 0 1 1 1 0 BUD22 SpoIIIAH PF12685.7 gi|300711709|ref|YP_003737523.1| - 2.4 7.9 19.2 3.8 7.3 19.2 1.4 1 0 0 1 1 1 0 SpoIIIAH-like protein Spore_coat_CotO PF14153.6 gi|300711709|ref|YP_003737523.1| - 3.9 7.3 10.2 5.3 6.9 10.2 1.2 1 0 0 1 1 1 0 Spore coat protein CotO Presenilin PF01080.17 gi|300711710|ref|YP_003737524.1| - 0.002 17.0 0.1 0.0022 16.8 0.1 1.0 1 0 0 1 1 1 1 Presenilin SpoIIIAH PF12685.7 gi|300711710|ref|YP_003737524.1| - 0.21 11.4 9.9 0.37 10.6 9.9 1.4 1 0 0 1 1 1 0 SpoIIIAH-like protein SDA1 PF05285.12 gi|300711710|ref|YP_003737524.1| - 0.28 10.5 28.8 0.4 10.1 28.8 1.2 1 0 0 1 1 1 0 SDA1 Mpp10 PF04006.12 gi|300711710|ref|YP_003737524.1| - 0.37 9.2 21.6 0.49 8.8 21.6 1.1 1 0 0 1 1 1 0 Mpp10 protein Zip PF02535.22 gi|300711710|ref|YP_003737524.1| - 1.4 8.1 5.5 2 7.5 5.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Cytochrom_NNT PF03264.14 gi|300711711|ref|YP_003737525.1| - 0.0028 17.4 0.0 0.0039 16.9 0.0 1.2 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Zn_Tnp_IS1 PF03811.13 gi|300711711|ref|YP_003737525.1| - 0.013 15.2 0.1 0.013 15.2 0.1 1.8 2 0 0 2 2 2 0 InsA N-terminal domain ABC_tran_CTD PF16326.5 gi|300711711|ref|YP_003737525.1| - 0.037 14.3 1.1 0.065 13.5 1.1 1.8 1 1 0 1 1 1 0 ABC transporter C-terminal domain SlyX PF04102.12 gi|300711711|ref|YP_003737525.1| - 0.06 14.0 0.0 0.098 13.3 0.0 1.3 1 0 0 1 1 1 0 SlyX Zn-ribbon_8 PF09723.10 gi|300711711|ref|YP_003737525.1| - 0.077 13.1 0.9 1.6 8.9 0.0 2.3 2 0 0 2 2 2 0 Zinc ribbon domain PilJ PF13675.6 gi|300711711|ref|YP_003737525.1| - 0.11 12.5 0.0 0.16 12.0 0.0 1.3 1 1 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term Anti-TRAP PF15777.5 gi|300711711|ref|YP_003737525.1| - 0.14 12.2 0.5 0.24 11.4 0.0 1.7 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein GvpO PF05800.11 gi|300711712|ref|YP_003737526.1| - 2.4e-33 114.0 2.2 3.3e-33 113.5 2.2 1.2 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpO Gas_vesicle PF00741.18 gi|300711713|ref|YP_003737527.1| - 7.2e-13 48.5 5.3 1e-12 47.9 5.3 1.3 1 0 0 1 1 1 1 Gas vesicle protein GvpL_GvpF PF06386.11 gi|300711714|ref|YP_003737528.1| - 1.5e-42 146.2 1.5 2.8e-23 83.1 0.1 2.0 1 1 1 2 2 2 2 Gas vesicle synthesis protein GvpL/GvpF GvpG PF05120.12 gi|300711715|ref|YP_003737529.1| - 0.0017 18.3 2.6 0.002 18.1 2.6 1.2 1 0 0 1 1 1 1 Gas vesicle protein G Orthopox_A49R PF06489.11 gi|300711715|ref|YP_003737529.1| - 0.015 15.5 0.1 0.015 15.5 0.1 1.2 1 0 0 1 1 1 0 Orthopoxvirus A49R protein GvpH PF05455.11 gi|300711716|ref|YP_003737530.1| - 6.3e-21 75.2 9.3 7.1e-21 75.1 9.3 1.0 1 0 0 1 1 1 1 GvpH ArsA_HSP20 PF17886.1 gi|300711716|ref|YP_003737530.1| - 0.025 14.1 0.1 0.27 10.8 0.1 2.2 1 1 0 1 1 1 0 HSP20-like domain found in ArsA Gas_vesicle PF00741.18 gi|300711718|ref|YP_003737532.1| - 8e-14 51.5 7.4 1e-13 51.1 7.4 1.2 1 0 0 1 1 1 1 Gas vesicle protein GvpK PF05121.12 gi|300711719|ref|YP_003737533.1| - 1.2e-23 82.9 5.6 1.7e-23 82.5 5.6 1.2 1 0 0 1 1 1 1 Gas vesicle protein K Rx_N PF18052.1 gi|300711719|ref|YP_003737533.1| - 0.008 16.4 1.2 0.011 16.0 1.2 1.2 1 0 0 1 1 1 1 Rx N-terminal domain Glu-tRNAGln PF02686.15 gi|300711719|ref|YP_003737533.1| - 0.027 14.8 0.9 0.06 13.7 0.9 1.7 1 1 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit Cep57_CLD_2 PF14197.6 gi|300711719|ref|YP_003737533.1| - 0.039 14.1 0.4 0.063 13.4 0.4 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF2205 PF10224.9 gi|300711719|ref|YP_003737533.1| - 0.051 13.6 0.8 1.3 9.0 0.3 2.1 1 1 1 2 2 2 0 Short coiled-coil protein Baculo_PEP_C PF04513.12 gi|300711719|ref|YP_003737533.1| - 0.13 12.3 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus FlaC_arch PF05377.11 gi|300711719|ref|YP_003737533.1| - 0.17 12.3 1.5 1.8 9.0 0.7 2.3 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Bap31_Bap29_C PF18035.1 gi|300711719|ref|YP_003737533.1| - 2.7 8.0 7.1 0.78 9.8 0.4 2.6 3 0 0 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain GvpL_GvpF PF06386.11 gi|300711720|ref|YP_003737534.1| - 2.8e-74 250.1 0.3 3.1e-74 250.0 0.3 1.0 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpL/GvpF DUF4164 PF13747.6 gi|300711720|ref|YP_003737534.1| - 0.15 12.4 6.0 0.075 13.3 1.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Titin_Z PF09042.11 gi|300711720|ref|YP_003737534.1| - 0.35 10.9 1.8 0.73 9.8 1.8 1.5 1 0 0 1 1 1 0 Titin Z Gas_vesicle PF00741.18 gi|300711721|ref|YP_003737535.1| - 2.5e-12 46.7 10.3 3.1e-12 46.4 10.3 1.1 1 0 0 1 1 1 1 Gas vesicle protein DMRL_synthase PF00885.19 gi|300711722|ref|YP_003737536.1| - 3e-32 111.4 0.9 3.2e-32 111.3 0.9 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Arm-DNA-bind_3 PF13356.6 gi|300711722|ref|YP_003737536.1| - 0.64 10.4 0.1 0.64 10.4 0.1 2.4 2 2 0 2 2 2 0 Arm DNA-binding domain Aminotran_1_2 PF00155.21 gi|300711723|ref|YP_003737537.1| - 9.7e-63 212.5 0.0 1.1e-62 212.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|300711723|ref|YP_003737537.1| - 0.00061 18.4 0.0 0.00091 17.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|300711723|ref|YP_003737537.1| - 0.0023 17.3 0.0 0.004 16.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|300711723|ref|YP_003737537.1| - 0.033 13.5 0.0 0.058 12.7 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|300711723|ref|YP_003737537.1| - 0.13 11.2 0.0 0.41 9.6 0.0 1.7 2 0 0 2 2 2 0 Aminotransferase class-V Cucumopine_C PF18631.1 gi|300711723|ref|YP_003737537.1| - 0.15 12.0 0.0 0.29 11.1 0.0 1.5 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain DUF4129 PF13559.6 gi|300711723|ref|YP_003737537.1| - 1.7 9.0 4.8 76 3.7 0.0 4.6 5 0 0 5 5 5 0 Domain of unknown function (DUF4129) Glyoxalase PF00903.25 gi|300711724|ref|YP_003737538.1| - 3.3e-24 85.5 0.0 4.3e-24 85.1 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CBS PF00571.28 gi|300711725|ref|YP_003737539.1| - 6.4e-21 74.6 2.4 2.4e-11 43.9 0.1 2.5 3 0 0 3 3 3 2 CBS domain HTH_3 PF01381.22 gi|300711725|ref|YP_003737539.1| - 4.2e-12 45.9 0.1 7.7e-12 45.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|300711725|ref|YP_003737539.1| - 2e-11 44.1 1.2 4.7e-11 42.9 1.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|300711725|ref|YP_003737539.1| - 2.8e-07 30.5 0.0 4.6e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|300711725|ref|YP_003737539.1| - 0.00027 20.8 0.0 0.00075 19.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|300711725|ref|YP_003737539.1| - 0.00065 19.5 0.3 0.0038 17.1 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|300711725|ref|YP_003737539.1| - 0.0017 18.7 0.0 0.0032 17.9 0.0 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|300711725|ref|YP_003737539.1| - 0.044 13.3 0.2 5.6 6.6 0.1 3.0 2 0 0 2 2 2 0 Sigma-70, region 4 Herpes_BBRF1 PF04793.12 gi|300711725|ref|YP_003737539.1| - 0.049 12.7 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 BRRF1-like protein HTH_Crp_2 PF13545.6 gi|300711725|ref|YP_003737539.1| - 0.08 12.9 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF555 PF04475.12 gi|300711726|ref|YP_003737540.1| - 1.4e-47 160.2 0.1 1.6e-47 160.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.12 gi|300711726|ref|YP_003737540.1| - 0.016 15.4 0.0 0.036 14.3 0.0 1.5 1 0 0 1 1 1 0 Dodecin Proteasome PF00227.26 gi|300711728|ref|YP_003737542.1| - 2.4e-46 157.6 0.7 2.7e-46 157.4 0.7 1.0 1 0 0 1 1 1 1 Proteasome subunit GCS PF03074.16 gi|300711729|ref|YP_003737543.1| - 0.056 12.8 0.0 0.57 9.5 0.0 2.0 2 0 0 2 2 2 0 Glutamate-cysteine ligase AI-2E_transport PF01594.16 gi|300711730|ref|YP_003737544.1| - 1.6e-24 86.7 38.9 2.1e-24 86.3 38.9 1.1 1 0 0 1 1 1 1 AI-2E family transporter Caps_synth_CapC PF14102.6 gi|300711730|ref|YP_003737544.1| - 0.025 15.0 6.7 0.025 15.0 6.7 4.1 2 1 0 3 3 3 0 Capsule biosynthesis CapC Nudix_N_2 PF14803.6 gi|300711731|ref|YP_003737545.1| - 0.024 14.5 4.9 0.042 13.8 0.1 2.3 2 1 0 2 2 2 0 Nudix N-terminal zf-RRN7 PF11781.8 gi|300711731|ref|YP_003737545.1| - 0.097 12.4 4.4 3.2 7.5 0.4 2.9 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-ISL3 PF14690.6 gi|300711731|ref|YP_003737545.1| - 0.8 10.4 4.0 1.6 9.4 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TP6A_N PF04406.14 gi|300711732|ref|YP_003737546.1| - 1e-13 51.0 0.2 1.8e-13 50.2 0.2 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase cpYpsA PF12694.7 gi|300711732|ref|YP_003737546.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family Topo-VIb_trans PF09239.11 gi|300711733|ref|YP_003737547.1| - 3.6e-62 208.9 0.0 7.3e-62 207.9 0.0 1.5 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|300711733|ref|YP_003737547.1| - 8.1e-37 125.9 1.3 6.9e-36 122.9 0.5 2.4 2 0 0 2 2 2 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|300711733|ref|YP_003737547.1| - 1.1e-13 51.7 0.0 3e-13 50.3 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|300711733|ref|YP_003737547.1| - 2e-11 43.8 0.0 6.3e-11 42.3 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|300711733|ref|YP_003737547.1| - 0.062 13.3 8.2 0.33 10.9 0.0 3.8 3 2 0 3 3 3 0 Histidine kinase-like ATPase domain MAF_flag10 PF01973.18 gi|300711733|ref|YP_003737547.1| - 0.092 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF115 Zip PF02535.22 gi|300711734|ref|YP_003737548.1| - 4.7e-13 49.1 24.3 1.2e-11 44.4 8.9 2.2 1 1 1 2 2 2 2 ZIP Zinc transporter DUF21 PF01595.20 gi|300711734|ref|YP_003737548.1| - 9.4 5.9 12.2 0.12 12.0 3.0 2.2 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain DNA_gyraseB PF00204.25 gi|300711735|ref|YP_003737549.1| - 2.1e-60 203.2 0.2 3.3e-60 202.5 0.2 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|300711735|ref|YP_003737549.1| - 5.6e-30 103.3 0.1 1.3e-29 102.1 0.1 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|300711735|ref|YP_003737549.1| - 1.4e-24 86.7 0.1 4.4e-24 85.1 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|300711735|ref|YP_003737549.1| - 1.6e-18 66.8 0.1 4.1e-18 65.5 0.0 1.8 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 gi|300711735|ref|YP_003737549.1| - 0.00077 19.3 0.0 0.0018 18.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|300711736|ref|YP_003737550.1| - 1.4e-157 525.0 0.0 1.7e-157 524.7 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|300711736|ref|YP_003737550.1| - 2.2e-76 251.1 11.0 4e-14 51.8 0.1 6.4 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller Nnf1 PF03980.14 gi|300711736|ref|YP_003737550.1| - 0.024 15.0 1.3 0.053 13.9 1.3 1.6 1 0 0 1 1 1 0 Nnf1 MTH865 PF07747.11 gi|300711738|ref|YP_003737552.1| - 4.6e-30 103.2 0.1 5.2e-30 103.0 0.1 1.0 1 0 0 1 1 1 1 MTH865-like family polyprenyl_synt PF00348.17 gi|300711739|ref|YP_003737553.1| - 4.4e-54 183.2 0.0 5.3e-54 183.0 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Abhydrolase_1 PF00561.20 gi|300711740|ref|YP_003737554.1| - 7.3e-29 101.2 0.0 1.1e-27 97.4 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300711740|ref|YP_003737554.1| - 2.8e-23 83.7 5.9 3.4e-23 83.4 5.9 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300711740|ref|YP_003737554.1| - 1.6e-20 73.4 0.0 3e-20 72.5 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|300711740|ref|YP_003737554.1| - 2.5e-05 23.1 0.0 4e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Ndr family DLH PF01738.18 gi|300711740|ref|YP_003737554.1| - 0.0015 18.1 0.0 0.46 10.0 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family PGAP1 PF07819.13 gi|300711740|ref|YP_003737554.1| - 0.0018 18.0 0.1 0.13 11.9 0.0 2.2 1 1 1 2 2 2 1 PGAP1-like protein Esterase PF00756.20 gi|300711740|ref|YP_003737554.1| - 0.0024 17.5 0.0 0.005 16.5 0.0 1.4 1 1 0 1 1 1 1 Putative esterase Abhydrolase_5 PF12695.7 gi|300711740|ref|YP_003737554.1| - 0.0069 16.2 0.0 0.046 13.5 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family Esterase_phd PF10503.9 gi|300711740|ref|YP_003737554.1| - 0.054 13.0 0.2 0.15 11.5 0.2 1.8 1 1 0 1 1 1 0 Esterase PHB depolymerase Palm_thioest PF02089.15 gi|300711740|ref|YP_003737554.1| - 0.057 13.3 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF2048 PF09752.9 gi|300711740|ref|YP_003737554.1| - 0.2 10.7 0.0 0.72 8.9 0.0 1.8 2 0 0 2 2 2 0 Abhydrolase domain containing 18 Thioesterase PF00975.20 gi|300711740|ref|YP_003737554.1| - 0.21 11.7 0.0 0.32 11.1 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain UPF0227 PF05728.12 gi|300711740|ref|YP_003737554.1| - 0.24 11.3 0.0 0.36 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Peptidase_M42 PF05343.14 gi|300711741|ref|YP_003737555.1| - 2.6e-92 309.0 0.8 3e-92 308.8 0.8 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 gi|300711741|ref|YP_003737555.1| - 1.4e-09 38.0 0.6 7.4e-06 25.8 0.0 2.1 2 0 0 2 2 2 2 Peptidase family M28 Peptidase_M20 PF01546.28 gi|300711741|ref|YP_003737555.1| - 3.9e-08 33.2 0.3 6.8e-08 32.5 0.3 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 HicB PF05534.12 gi|300711741|ref|YP_003737555.1| - 0.19 11.6 0.1 0.4 10.6 0.1 1.4 1 0 0 1 1 1 0 HicB family Copper-bind PF00127.20 gi|300711742|ref|YP_003737556.1| - 3.6e-11 43.4 0.0 9e-11 42.1 0.0 1.7 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family TrkH PF02386.16 gi|300711743|ref|YP_003737557.1| - 1.1e-62 212.1 9.8 2.4e-60 204.4 9.8 2.0 1 1 0 1 1 1 1 Cation transport protein TrkA_N PF02254.18 gi|300711744|ref|YP_003737558.1| - 1.4e-48 163.9 9.2 1.1e-25 90.1 0.6 2.8 3 0 0 3 3 3 2 TrkA-N domain TrkA_C PF02080.21 gi|300711744|ref|YP_003737558.1| - 6.3e-30 102.8 2.3 1e-13 50.9 0.0 3.0 2 0 0 2 2 2 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|300711744|ref|YP_003737558.1| - 1e-10 42.0 1.0 0.00028 21.3 0.1 3.6 4 0 0 4 4 4 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|300711744|ref|YP_003737558.1| - 3.2e-09 37.0 0.2 0.0033 17.5 0.0 2.5 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|300711744|ref|YP_003737558.1| - 3.2e-08 33.9 3.2 0.0065 16.7 0.3 3.0 3 0 0 3 3 3 2 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|300711744|ref|YP_003737558.1| - 6.2e-06 26.7 0.5 0.03 14.9 0.0 3.4 3 1 1 4 4 3 2 NADP oxidoreductase coenzyme F420-dependent Castor_Poll_mid PF06241.12 gi|300711744|ref|YP_003737558.1| - 1.2e-05 25.2 0.0 0.0017 18.3 0.0 2.4 2 0 0 2 2 2 1 Castor and Pollux, part of voltage-gated ion channel FAD_binding_3 PF01494.19 gi|300711744|ref|YP_003737558.1| - 1.6e-05 24.4 0.7 0.16 11.1 0.0 3.1 3 0 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.14 gi|300711744|ref|YP_003737558.1| - 3.9e-05 23.0 0.9 0.017 14.3 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|300711744|ref|YP_003737558.1| - 0.00012 22.0 0.1 0.021 14.7 0.1 2.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|300711744|ref|YP_003737558.1| - 0.00022 20.8 3.6 0.00036 20.2 1.3 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XdhC_C PF13478.6 gi|300711744|ref|YP_003737558.1| - 0.00023 21.7 0.5 0.48 10.9 0.1 3.5 2 1 0 3 3 3 1 XdhC Rossmann domain Semialdhyde_dh PF01118.24 gi|300711744|ref|YP_003737558.1| - 0.0004 20.8 0.3 0.9 10.0 0.0 2.5 2 0 0 2 2 2 2 Semialdehyde dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|300711744|ref|YP_003737558.1| - 0.0011 18.3 0.7 0.26 10.6 0.0 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|300711744|ref|YP_003737558.1| - 0.013 15.5 0.0 7.4 6.5 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|300711744|ref|YP_003737558.1| - 0.015 15.8 6.3 0.49 11.0 0.0 3.8 4 0 0 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|300711744|ref|YP_003737558.1| - 0.039 13.6 0.5 0.21 11.2 0.1 2.4 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA ADH_zinc_N PF00107.26 gi|300711744|ref|YP_003737558.1| - 0.04 13.9 1.4 0.69 9.9 0.1 3.2 2 2 1 3 3 3 0 Zinc-binding dehydrogenase DAO PF01266.24 gi|300711744|ref|YP_003737558.1| - 0.062 12.9 2.3 0.36 10.3 2.1 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase DRTGG PF07085.12 gi|300711744|ref|YP_003737558.1| - 0.17 11.7 3.4 3.7 7.4 0.0 3.8 4 1 1 5 5 5 0 DRTGG domain NAD_binding_8 PF13450.6 gi|300711744|ref|YP_003737558.1| - 0.22 11.8 1.4 2.8 8.3 0.3 2.8 3 0 0 3 3 2 0 NAD(P)-binding Rossmann-like domain Rossmann-like PF10727.9 gi|300711744|ref|YP_003737558.1| - 0.22 11.4 3.2 4.2 7.2 0.4 2.8 2 0 0 2 2 2 0 Rossmann-like domain Arteri_nsp7a PF16749.5 gi|300711744|ref|YP_003737558.1| - 2.5 8.3 4.6 13 6.0 0.1 3.6 4 0 0 4 4 4 0 Arterivirus nonstructural protein 7 alpha Polyketide_cyc2 PF10604.9 gi|300711745|ref|YP_003737559.1| - 1.2e-13 51.6 0.4 1.6e-13 51.2 0.4 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|300711745|ref|YP_003737559.1| - 6.9e-09 36.0 0.3 1.2e-08 35.3 0.3 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport AHSA1 PF08327.11 gi|300711745|ref|YP_003737559.1| - 0.0023 18.2 0.1 0.003 17.8 0.1 1.3 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein CAP18_C PF12153.8 gi|300711745|ref|YP_003737559.1| - 0.11 12.4 1.8 0.2 11.5 1.8 1.3 1 0 0 1 1 1 0 LPS binding domain of CAP18 (C terminal) Pyr_redox_2 PF07992.14 gi|300711746|ref|YP_003737560.1| - 9.4e-11 41.5 6.6 2.5e-06 27.0 0.3 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300711746|ref|YP_003737560.1| - 8.6e-09 35.0 4.8 3.3e-06 26.5 1.6 2.4 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|300711746|ref|YP_003737560.1| - 4.3e-06 26.6 11.8 0.0025 17.4 0.2 2.7 1 1 2 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300711746|ref|YP_003737560.1| - 4.9e-06 25.5 0.3 0.064 12.0 0.7 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 gi|300711746|ref|YP_003737560.1| - 5.4e-05 22.6 0.2 0.11 11.8 0.1 2.9 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|300711746|ref|YP_003737560.1| - 0.00012 21.2 0.8 0.0082 15.2 0.1 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|300711746|ref|YP_003737560.1| - 0.00064 18.9 0.4 0.0045 16.1 0.7 2.0 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|300711746|ref|YP_003737560.1| - 0.00086 18.6 2.8 0.00086 18.6 2.8 1.6 1 1 1 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|300711746|ref|YP_003737560.1| - 0.0012 18.1 0.3 0.0035 16.6 0.3 1.7 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 gi|300711746|ref|YP_003737560.1| - 0.0024 18.1 1.6 0.0029 17.8 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|300711746|ref|YP_003737560.1| - 0.0025 17.1 0.3 0.0049 16.2 0.3 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|300711746|ref|YP_003737560.1| - 0.0043 16.4 3.7 0.0043 16.4 3.7 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|300711746|ref|YP_003737560.1| - 0.034 13.0 6.8 0.14 10.9 0.2 2.1 1 1 1 2 2 2 0 Tryptophan halogenase Pyr_redox PF00070.27 gi|300711746|ref|YP_003737560.1| - 0.047 14.3 1.4 0.14 12.7 0.7 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300711746|ref|YP_003737560.1| - 0.093 12.7 0.1 0.093 12.7 0.1 3.1 3 1 0 3 3 3 0 FAD-NAD(P)-binding SNase PF00565.17 gi|300711747|ref|YP_003737561.1| - 1.7e-21 76.7 0.0 2.6e-21 76.1 0.0 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue Excalibur PF05901.11 gi|300711747|ref|YP_003737561.1| - 3.3e-06 27.6 2.2 1.2e-05 25.8 2.2 2.1 1 0 0 1 1 1 1 Excalibur calcium-binding domain DFP PF04127.15 gi|300711748|ref|YP_003737562.1| - 2e-44 151.7 2.9 9.4e-43 146.2 0.7 2.2 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|300711748|ref|YP_003737562.1| - 3.9e-34 117.7 0.4 6.5e-34 117.0 0.4 1.4 1 0 0 1 1 1 1 Flavoprotein MNHE PF01899.16 gi|300711749|ref|YP_003737563.1| - 4.8e-34 117.2 1.5 6.6e-34 116.8 1.5 1.2 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit MrpF_PhaF PF04066.13 gi|300711750|ref|YP_003737564.1| - 4.8e-20 71.7 4.2 4.8e-20 71.7 4.2 2.0 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) PhaG_MnhG_YufB PF03334.14 gi|300711751|ref|YP_003737565.1| - 1.2e-25 89.6 9.3 1.5e-25 89.3 9.3 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit AA_permease_2 PF13520.6 gi|300711751|ref|YP_003737565.1| - 0.0097 14.8 2.0 0.012 14.5 2.0 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4040 PF13244.6 gi|300711752|ref|YP_003737566.1| - 2.3e-18 66.1 16.1 2.3e-18 66.1 16.1 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4040) Oxidored_q3 PF00499.20 gi|300711752|ref|YP_003737566.1| - 0.11 12.2 10.1 0.068 12.9 8.6 1.4 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MnhB PF04039.13 gi|300711753|ref|YP_003737567.1| - 6.6e-21 74.9 17.9 8.3e-21 74.6 17.9 1.2 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF2613 PF11021.8 gi|300711753|ref|YP_003737567.1| - 0.043 13.9 0.2 0.043 13.9 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) PetG PF02529.15 gi|300711753|ref|YP_003737567.1| - 0.16 11.9 0.3 0.16 11.9 0.3 2.9 4 1 0 4 4 4 0 Cytochrome B6-F complex subunit 5 DUF998 PF06197.13 gi|300711753|ref|YP_003737567.1| - 0.78 9.3 14.6 6.6 6.3 14.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF998) Oxidored_q2 PF00420.24 gi|300711754|ref|YP_003737568.1| - 1.8e-25 88.6 4.6 2.1e-25 88.3 4.6 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MHYT PF03707.16 gi|300711754|ref|YP_003737568.1| - 0.49 10.6 6.0 1.2 9.3 0.9 2.4 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat CD47 PF04549.14 gi|300711754|ref|YP_003737568.1| - 0.81 9.9 11.4 0.052 13.7 3.6 2.0 2 0 0 2 2 2 0 CD47 transmembrane region LtrA PF06772.11 gi|300711754|ref|YP_003737568.1| - 1.1 8.3 12.2 1.4 8.1 12.2 1.0 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) DUF2892 PF11127.8 gi|300711754|ref|YP_003737568.1| - 2.1 8.4 8.6 1 9.4 1.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF2108 PF09881.9 gi|300711754|ref|YP_003737568.1| - 3.6 7.6 12.1 0.091 12.7 3.8 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF443 PF04276.12 gi|300711754|ref|YP_003737568.1| - 5.8 6.7 8.7 1 9.1 3.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF443) Proton_antipo_M PF00361.20 gi|300711755|ref|YP_003737569.1| - 7.3e-62 209.2 20.3 7.3e-62 209.2 20.3 1.6 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|300711755|ref|YP_003737569.1| - 0.0065 16.5 2.2 0.061 13.4 0.0 3.2 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|300711756|ref|YP_003737570.1| - 3.4e-57 193.9 12.7 6.1e-57 193.1 12.7 1.4 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|300711756|ref|YP_003737570.1| - 4.6e-07 29.8 0.2 1.4e-06 28.3 0.2 1.8 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TcdA_TcdB_pore PF12920.7 gi|300711756|ref|YP_003737570.1| - 0.14 10.4 1.7 0.21 9.8 1.7 1.2 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain Proton_antipo_M PF00361.20 gi|300711757|ref|YP_003737571.1| - 9.6e-37 126.8 15.7 9.6e-37 126.8 15.7 2.0 2 1 0 2 2 2 1 Proton-conducting membrane transporter MaoC_dehydratas PF01575.19 gi|300711758|ref|YP_003737572.1| - 3.3e-09 36.4 0.0 7.7e-09 35.2 0.0 1.6 1 1 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|300711758|ref|YP_003737572.1| - 0.0015 18.6 0.1 0.058 13.5 0.1 2.2 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.22 gi|300711758|ref|YP_003737572.1| - 0.016 15.5 0.0 0.027 14.8 0.0 1.4 1 0 0 1 1 1 0 Thioesterase superfamily Pribosyltran PF00156.27 gi|300711759|ref|YP_003737573.1| - 7.2e-16 58.1 2.4 1e-15 57.6 2.4 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300711759|ref|YP_003737573.1| - 0.0011 18.5 0.1 0.0016 17.9 0.1 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase SBP_bac_5 PF00496.22 gi|300711760|ref|YP_003737574.1| - 5.5e-56 190.1 1.0 8.3e-56 189.6 1.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TAT_signal PF10518.9 gi|300711760|ref|YP_003737574.1| - 0.019 14.8 0.7 0.037 13.9 0.7 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence BPD_transp_1 PF00528.22 gi|300711761|ref|YP_003737575.1| - 1.1e-42 145.9 13.2 1.1e-42 145.9 13.2 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Saf_2TM PF18303.1 gi|300711761|ref|YP_003737575.1| - 8 6.0 10.3 2.6 7.6 1.7 2.3 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain BPD_transp_1 PF00528.22 gi|300711762|ref|YP_003737576.1| - 1.7e-31 109.4 12.3 2.5e-31 108.8 11.0 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|300711762|ref|YP_003737576.1| - 9.3e-07 28.7 0.0 9.3e-07 28.7 0.0 3.4 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|300711763|ref|YP_003737577.1| - 7.5e-27 94.5 0.0 1e-26 94.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|300711763|ref|YP_003737577.1| - 9.1e-20 71.0 0.2 1.7e-19 70.1 0.2 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|300711763|ref|YP_003737577.1| - 8.1e-05 22.6 0.2 0.00018 21.4 0.0 1.7 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|300711763|ref|YP_003737577.1| - 0.01 16.2 0.0 0.016 15.6 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|300711763|ref|YP_003737577.1| - 0.15 12.3 0.8 1 9.6 0.8 2.2 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|300711763|ref|YP_003737577.1| - 0.17 11.9 0.1 0.38 10.8 0.1 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain ABC_tran PF00005.27 gi|300711764|ref|YP_003737578.1| - 1.3e-31 109.9 0.0 1.9e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|300711764|ref|YP_003737578.1| - 7.8e-18 64.8 0.1 1.4e-17 63.9 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|300711764|ref|YP_003737578.1| - 3.2e-05 23.9 0.2 0.013 15.3 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|300711764|ref|YP_003737578.1| - 0.00024 21.4 0.0 0.0017 18.6 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300711764|ref|YP_003737578.1| - 0.00034 21.0 0.0 0.00072 20.0 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 gi|300711764|ref|YP_003737578.1| - 0.019 15.0 0.1 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|300711764|ref|YP_003737578.1| - 0.021 14.5 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|300711764|ref|YP_003737578.1| - 0.045 13.8 0.0 0.11 12.5 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.29 gi|300711764|ref|YP_003737578.1| - 0.045 14.2 0.0 0.19 12.1 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|300711764|ref|YP_003737578.1| - 0.077 12.4 0.0 4.5 6.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein RNA_helicase PF00910.22 gi|300711764|ref|YP_003737578.1| - 0.09 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 RNA helicase SMC_N PF02463.19 gi|300711764|ref|YP_003737578.1| - 0.11 11.9 0.0 0.47 9.9 0.0 1.8 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain MobB PF03205.14 gi|300711764|ref|YP_003737578.1| - 0.14 12.0 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.12 gi|300711764|ref|YP_003737578.1| - 0.16 11.9 0.1 0.29 11.1 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|300711764|ref|YP_003737578.1| - 0.18 12.0 0.1 2.4 8.3 0.0 2.7 4 0 0 4 4 4 0 AAA domain Sigma54_activat PF00158.26 gi|300711764|ref|YP_003737578.1| - 0.2 11.4 0.0 15 5.3 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain zf-CSL PF05207.13 gi|300711766|ref|YP_003737580.1| - 0.04 13.6 1.4 0.074 12.8 1.4 1.4 1 0 0 1 1 1 0 CSL zinc finger DUF3040 PF11239.8 gi|300711766|ref|YP_003737580.1| - 0.21 11.9 2.7 0.13 12.5 0.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DJ-1_PfpI PF01965.24 gi|300711767|ref|YP_003737581.1| - 7.9e-14 51.8 0.3 3.8e-12 46.3 0.3 2.3 1 1 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|300711767|ref|YP_003737581.1| - 4.5e-09 36.3 0.0 7.6e-09 35.5 0.0 1.4 1 1 0 1 1 1 1 ThiJ/PfpI family-like DUF5518 PF17647.1 gi|300711768|ref|YP_003737582.1| - 1.6e-16 60.5 41.3 1.9e-16 60.2 41.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5518) MGS PF02142.22 gi|300711770|ref|YP_003737584.1| - 7.3e-13 48.5 0.0 8.6e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 MGS-like domain DUF456 PF04306.13 gi|300711772|ref|YP_003737586.1| - 0.14 12.4 17.4 0.034 14.4 5.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF456) Abhydrolase_9_N PF15420.6 gi|300711772|ref|YP_003737586.1| - 0.86 9.6 9.2 0.39 10.7 2.9 2.4 2 1 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus COX1 PF00115.20 gi|300711773|ref|YP_003737587.1| - 4.9e-141 470.5 56.0 7.2e-141 470.0 56.0 1.2 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Ribosomal_L44 PF00935.19 gi|300711774|ref|YP_003737588.1| - 4e-21 75.3 2.0 4.7e-21 75.0 2.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 zf-ribbon_3 PF13248.6 gi|300711774|ref|YP_003737588.1| - 0.00046 19.5 0.6 0.7 9.4 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|300711774|ref|YP_003737588.1| - 0.001 18.9 4.4 0.034 14.0 0.3 2.3 2 0 0 2 2 2 2 SprT-like zinc ribbon domain F-112 PF09645.10 gi|300711774|ref|YP_003737588.1| - 0.082 13.0 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 F-112 protein zf-LITAF-like PF10601.9 gi|300711774|ref|YP_003737588.1| - 0.094 13.0 1.9 1.4 9.2 0.1 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|300711774|ref|YP_003737588.1| - 0.11 12.2 1.5 1.7 8.4 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Ribosomal_S27e PF01667.17 gi|300711775|ref|YP_003737589.1| - 3.6e-20 71.4 0.1 3.8e-20 71.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 gi|300711775|ref|YP_003737589.1| - 7.5e-06 25.4 0.8 1.2e-05 24.7 0.8 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|300711775|ref|YP_003737589.1| - 0.0016 18.6 1.0 0.0023 18.0 1.0 1.2 1 0 0 1 1 1 1 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|300711775|ref|YP_003737589.1| - 0.0095 15.8 0.2 0.011 15.6 0.2 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS91 PF14319.6 gi|300711775|ref|YP_003737589.1| - 0.022 14.8 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain DUF3797 PF12677.7 gi|300711775|ref|YP_003737589.1| - 0.025 14.5 1.7 0.32 10.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) TFIIS_C PF01096.18 gi|300711775|ref|YP_003737589.1| - 0.066 13.1 0.8 2.6 8.0 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) PADR1 PF08063.12 gi|300711775|ref|YP_003737589.1| - 0.11 12.4 1.0 0.28 11.0 1.1 1.7 1 1 1 2 2 2 0 PADR1 (NUC008) domain CpXC PF14353.6 gi|300711775|ref|YP_003737589.1| - 0.15 12.1 1.3 3.9 7.5 0.1 2.1 1 1 1 2 2 2 0 CpXC protein zf-IS66 PF13005.7 gi|300711775|ref|YP_003737589.1| - 0.26 11.7 4.5 1.7 9.1 0.5 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_4 PF13717.6 gi|300711775|ref|YP_003737589.1| - 0.32 11.0 4.1 7.8 6.5 4.1 2.2 1 1 0 1 1 1 0 zinc-ribbon domain EIF_2_alpha PF07541.12 gi|300711776|ref|YP_003737590.1| - 5.9e-26 90.9 0.0 9.1e-26 90.2 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|300711776|ref|YP_003737590.1| - 8e-14 51.8 0.9 1.5e-13 50.8 0.9 1.4 1 0 0 1 1 1 1 S1 RNA binding domain Nop10p PF04135.12 gi|300711777|ref|YP_003737591.1| - 1.1e-24 86.2 1.2 1.2e-24 86.1 1.2 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family PAC2 PF09754.9 gi|300711778|ref|YP_003737592.1| - 2e-48 165.3 0.9 2.3e-48 165.0 0.9 1.0 1 0 0 1 1 1 1 PAC2 family DnaJ PF00226.31 gi|300711779|ref|YP_003737593.1| - 1.2e-09 38.1 0.1 2.8e-09 36.9 0.0 1.6 2 0 0 2 2 2 1 DnaJ domain Metallophos PF00149.28 gi|300711780|ref|YP_003737594.1| - 6.7e-07 30.0 0.1 6.7e-07 30.0 0.1 1.8 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase MutS_II PF05188.17 gi|300711780|ref|YP_003737594.1| - 0.0011 19.2 0.0 0.0017 18.6 0.0 1.2 1 0 0 1 1 1 1 MutS domain II Amino_oxidase PF01593.24 gi|300711781|ref|YP_003737595.1| - 2e-47 162.6 1.2 3.8e-46 158.3 1.2 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|300711781|ref|YP_003737595.1| - 1.2e-17 63.9 0.6 4e-17 62.2 0.4 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300711781|ref|YP_003737595.1| - 4.6e-16 59.4 5.8 1.7e-15 57.4 5.6 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300711781|ref|YP_003737595.1| - 5.2e-09 35.8 0.5 3.4e-07 29.8 0.2 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300711781|ref|YP_003737595.1| - 9.4e-09 34.5 0.0 5.5e-07 28.6 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 gi|300711781|ref|YP_003737595.1| - 1.1e-08 34.5 0.3 2.1e-08 33.7 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|300711781|ref|YP_003737595.1| - 5.1e-08 32.7 0.6 9.1e-08 31.9 0.6 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|300711781|ref|YP_003737595.1| - 3.5e-06 26.4 0.1 5.4e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 gi|300711781|ref|YP_003737595.1| - 3.9e-06 27.3 0.5 2.9e-05 24.5 0.4 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|300711781|ref|YP_003737595.1| - 1.2e-05 24.6 1.1 5.2e-05 22.5 0.5 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|300711781|ref|YP_003737595.1| - 2.7e-05 23.6 1.1 5e-05 22.7 0.6 1.7 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|300711781|ref|YP_003737595.1| - 0.00033 19.8 1.3 0.0012 18.0 0.1 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 gi|300711781|ref|YP_003737595.1| - 0.00096 18.5 0.1 0.0016 17.8 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_9 PF13454.6 gi|300711781|ref|YP_003737595.1| - 0.0012 18.9 2.7 0.0064 16.5 0.5 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|300711781|ref|YP_003737595.1| - 0.011 16.1 0.2 0.089 13.2 0.0 2.4 3 0 0 3 3 3 0 Putative NAD(P)-binding Trp_halogenase PF04820.14 gi|300711781|ref|YP_003737595.1| - 0.028 13.3 0.1 0.042 12.7 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase 3HCDH_N PF02737.18 gi|300711781|ref|YP_003737595.1| - 0.046 13.6 0.1 0.087 12.7 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MCRA PF06100.11 gi|300711781|ref|YP_003737595.1| - 0.05 12.4 0.0 0.065 12.0 0.0 1.1 1 0 0 1 1 1 0 MCRA family Pyr_redox_3 PF13738.6 gi|300711781|ref|YP_003737595.1| - 0.051 12.8 0.1 0.16 11.2 0.1 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase CoA_transf_3 PF02515.17 gi|300711781|ref|YP_003737595.1| - 0.061 12.4 0.0 0.14 11.2 0.1 1.6 2 0 0 2 2 2 0 CoA-transferase family III YjeF_N PF03853.15 gi|300711781|ref|YP_003737595.1| - 0.073 13.0 0.2 0.17 11.8 0.2 1.5 1 0 0 1 1 1 0 YjeF-related protein N-terminus ApbA PF02558.16 gi|300711781|ref|YP_003737595.1| - 0.099 12.3 0.2 0.17 11.6 0.2 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Glyco_transf_4 PF13439.6 gi|300711781|ref|YP_003737595.1| - 0.14 12.2 0.1 0.27 11.2 0.1 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 PALP PF00291.25 gi|300711782|ref|YP_003737596.1| - 2.3e-60 204.5 8.4 2.7e-60 204.3 8.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DZR PF12773.7 gi|300711782|ref|YP_003737596.1| - 0.0041 17.1 0.1 0.0082 16.1 0.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|300711782|ref|YP_003737596.1| - 0.019 14.4 2.2 0.043 13.2 2.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zf-LYAR PF08790.11 gi|300711782|ref|YP_003737596.1| - 0.043 13.7 0.1 0.078 12.9 0.1 1.4 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger DUF35_N PF12172.8 gi|300711782|ref|YP_003737596.1| - 0.095 12.6 1.2 0.28 11.1 1.2 1.8 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) HypA PF01155.19 gi|300711782|ref|YP_003737596.1| - 0.15 12.1 0.1 0.29 11.2 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|300711782|ref|YP_003737596.1| - 0.24 11.6 1.1 0.77 9.9 1.1 1.9 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|300711782|ref|YP_003737596.1| - 0.26 12.1 0.5 0.46 11.3 0.5 1.4 1 0 0 1 1 1 0 zinc-ribbon family zinc_ribbon_2 PF13240.6 gi|300711782|ref|YP_003737596.1| - 0.64 9.8 3.3 1.4 8.7 3.3 1.5 1 0 0 1 1 1 0 zinc-ribbon domain UPF0016 PF01169.19 gi|300711783|ref|YP_003737597.1| - 4.7e-24 84.5 25.7 2.5e-15 56.5 3.3 2.8 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 AveC_like PF17198.4 gi|300711783|ref|YP_003737597.1| - 0.049 13.1 0.5 0.089 12.2 0.5 1.4 1 0 0 1 1 1 0 Spirocyclase AveC-like LysE PF01810.18 gi|300711784|ref|YP_003737598.1| - 1.6e-24 86.5 7.2 2.4e-24 85.9 7.2 1.3 1 1 0 1 1 1 1 LysE type translocator HD PF01966.22 gi|300711785|ref|YP_003737599.1| - 7.2e-18 65.0 0.9 1.4e-17 64.1 0.9 1.5 1 0 0 1 1 1 1 HD domain HD_4 PF13328.6 gi|300711785|ref|YP_003737599.1| - 0.062 13.0 0.6 0.21 11.3 0.1 1.8 2 0 0 2 2 2 0 HD domain tRNA-synt_2c PF01411.19 gi|300711786|ref|YP_003737600.1| - 4.6e-11 41.9 0.0 6.1e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|300711786|ref|YP_003737600.1| - 3e-07 30.4 0.1 5.2e-07 29.7 0.1 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain RNase_H_2 PF13482.6 gi|300711787|ref|YP_003737601.1| - 1.3e-37 129.3 0.0 1.8e-37 128.9 0.0 1.2 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_A_exo1 PF01612.20 gi|300711787|ref|YP_003737601.1| - 0.017 14.8 0.0 0.032 13.9 0.0 1.4 1 1 0 1 1 1 0 3'-5' exonuclease DUF2732 PF10809.8 gi|300711787|ref|YP_003737601.1| - 0.18 11.7 0.3 3.1 7.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2732) Polysacc_deac_1 PF01522.21 gi|300711788|ref|YP_003737602.1| - 2.1e-22 79.3 0.1 4.2e-22 78.4 0.1 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Trypan_PARP PF05887.11 gi|300711788|ref|YP_003737602.1| - 0.02 14.9 9.3 0.034 14.1 9.3 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF2334 PF10096.9 gi|300711788|ref|YP_003737602.1| - 0.041 13.5 0.0 0.063 12.9 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Fe_dep_repress PF01325.19 gi|300711789|ref|YP_003737603.1| - 2.1e-18 66.2 0.0 3.7e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|300711789|ref|YP_003737603.1| - 2.3e-09 37.2 0.1 5.3e-09 36.0 0.1 1.6 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.7 gi|300711789|ref|YP_003737603.1| - 7.7e-06 25.7 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|300711789|ref|YP_003737603.1| - 8e-05 22.5 0.0 0.00015 21.6 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300711789|ref|YP_003737603.1| - 0.00012 22.0 0.0 0.00022 21.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|300711789|ref|YP_003737603.1| - 0.0002 20.9 0.0 0.00048 19.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|300711789|ref|YP_003737603.1| - 0.00029 20.8 0.0 0.0008 19.3 0.0 1.6 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|300711789|ref|YP_003737603.1| - 0.0035 17.8 0.0 0.0056 17.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 gi|300711789|ref|YP_003737603.1| - 0.007 16.0 0.0 0.027 14.1 0.0 2.0 1 1 1 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|300711789|ref|YP_003737603.1| - 0.0072 16.4 0.0 0.014 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|300711789|ref|YP_003737603.1| - 0.0092 16.3 0.0 0.015 15.6 0.0 1.4 1 1 0 1 1 1 1 Transcriptional regulator FeoC PF09012.10 gi|300711789|ref|YP_003737603.1| - 0.015 15.3 0.0 0.04 14.0 0.0 1.7 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_IclR PF09339.10 gi|300711789|ref|YP_003737603.1| - 0.059 13.2 0.0 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 IclR helix-turn-helix domain Penicillinase_R PF03965.16 gi|300711789|ref|YP_003737603.1| - 0.13 12.6 0.0 0.35 11.2 0.0 1.7 1 1 0 1 1 1 0 Penicillinase repressor HTH_5 PF01022.20 gi|300711789|ref|YP_003737603.1| - 0.17 11.8 0.0 0.33 10.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF4226 PF10774.9 gi|300711790|ref|YP_003737604.1| - 0.00091 19.5 1.9 0.013 15.7 0.3 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4226) Phage_capsid PF05065.13 gi|300711790|ref|YP_003737604.1| - 0.038 13.3 0.1 0.05 12.9 0.1 1.1 1 0 0 1 1 1 0 Phage capsid family Ferritin_2 PF13668.6 gi|300711790|ref|YP_003737604.1| - 0.039 14.1 3.2 0.097 12.9 1.0 1.9 1 1 1 2 2 2 0 Ferritin-like domain LcrV PF04792.12 gi|300711790|ref|YP_003737604.1| - 0.31 10.3 3.3 0.5 9.6 1.8 1.7 1 1 1 2 2 2 0 V antigen (LcrV) protein Ferritin PF00210.24 gi|300711790|ref|YP_003737604.1| - 0.32 10.9 7.9 0.75 9.7 7.7 1.8 1 1 0 1 1 1 0 Ferritin-like domain Rubrerythrin PF02915.17 gi|300711790|ref|YP_003737604.1| - 0.59 10.5 9.5 0.56 10.6 5.4 2.5 1 1 2 3 3 3 0 Rubrerythrin UPF0051 PF01458.17 gi|300711791|ref|YP_003737605.1| - 2.5e-63 213.7 0.8 3e-63 213.4 0.8 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.17 gi|300711792|ref|YP_003737606.1| - 1e-72 244.4 0.5 1.4e-72 244.0 0.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.27 gi|300711793|ref|YP_003737607.1| - 2.6e-15 57.2 0.0 8.3e-15 55.5 0.0 1.8 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|300711793|ref|YP_003737607.1| - 1.1e-05 25.0 0.5 0.066 12.6 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|300711793|ref|YP_003737607.1| - 5.8e-05 23.0 0.2 0.095 12.5 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|300711793|ref|YP_003737607.1| - 0.00022 21.7 0.1 0.18 12.2 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|300711793|ref|YP_003737607.1| - 0.0027 17.4 0.1 0.0051 16.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|300711793|ref|YP_003737607.1| - 0.0039 17.2 0.1 2.2 8.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 gi|300711793|ref|YP_003737607.1| - 0.032 14.5 0.0 0.82 9.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|300711793|ref|YP_003737607.1| - 0.033 14.1 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_22 PF13401.6 gi|300711793|ref|YP_003737607.1| - 0.08 13.2 0.5 0.86 9.9 0.1 2.3 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|300711793|ref|YP_003737607.1| - 0.13 12.2 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|300711793|ref|YP_003737607.1| - 0.13 12.4 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|300711793|ref|YP_003737607.1| - 9.6 6.7 7.1 0.74 10.3 0.2 2.1 2 1 0 2 2 2 0 AAA domain DNA_pol_B PF00136.21 gi|300711794|ref|YP_003737608.1| - 5.1e-46 157.3 0.0 8.4e-46 156.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|300711794|ref|YP_003737608.1| - 1.8e-28 99.7 0.0 1.2e-27 96.9 0.0 2.1 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 gi|300711794|ref|YP_003737608.1| - 0.026 13.4 0.0 0.29 10.0 0.0 2.0 2 0 0 2 2 2 0 DNA polymerase type B, organellar and viral AAA_23 PF13476.6 gi|300711798|ref|YP_003737612.1| - 6.2e-23 82.3 1.6 6.2e-23 82.3 1.6 6.2 2 2 1 3 3 1 1 AAA domain SMC_N PF02463.19 gi|300711798|ref|YP_003737612.1| - 2.9e-16 59.6 27.6 2.1e-15 56.8 27.6 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|300711798|ref|YP_003737612.1| - 3.8e-15 56.5 1.3 5.6e-15 55.9 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_13 PF13166.6 gi|300711798|ref|YP_003737612.1| - 1.1e-11 44.2 48.5 0.00015 20.5 11.7 5.1 3 2 2 5 5 5 4 AAA domain Atg14 PF10186.9 gi|300711798|ref|YP_003737612.1| - 1.9e-09 37.1 61.5 0.0055 15.8 4.0 4.5 1 1 3 4 4 4 4 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_21 PF13304.6 gi|300711798|ref|YP_003737612.1| - 1.5e-07 31.6 9.4 0.00018 21.5 3.5 3.2 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 gi|300711798|ref|YP_003737612.1| - 1.9e-06 27.6 0.0 1.9e-06 27.6 0.0 6.1 4 2 3 7 7 7 1 AAA domain AAA_29 PF13555.6 gi|300711798|ref|YP_003737612.1| - 1.1e-05 25.1 0.0 1.9e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain APG6_N PF17675.1 gi|300711798|ref|YP_003737612.1| - 8.7e-05 23.1 24.6 8.7e-05 23.1 24.6 7.3 3 2 4 7 7 4 1 Apg6 coiled-coil region Spc7 PF08317.11 gi|300711798|ref|YP_003737612.1| - 0.00012 21.1 95.0 0.0029 16.5 26.0 6.3 2 2 3 5 5 5 4 Spc7 kinetochore protein GAS PF13851.6 gi|300711798|ref|YP_003737612.1| - 0.00045 19.6 19.5 0.00045 19.6 19.5 5.7 1 1 4 5 5 5 1 Growth-arrest specific micro-tubule binding Laminin_I PF06008.14 gi|300711798|ref|YP_003737612.1| - 0.0021 17.8 7.4 0.0021 17.8 7.4 6.0 2 2 2 6 6 5 2 Laminin Domain I bZIP_1 PF00170.21 gi|300711798|ref|YP_003737612.1| - 0.0039 17.3 0.9 0.0039 17.3 0.9 10.5 9 4 2 11 11 10 1 bZIP transcription factor Alanine_zipper PF11839.8 gi|300711798|ref|YP_003737612.1| - 0.0074 16.6 4.4 0.0074 16.6 4.4 5.9 6 1 0 6 6 5 2 Alanine-zipper, major outer membrane lipoprotein FliD_N PF02465.18 gi|300711798|ref|YP_003737612.1| - 0.1 13.3 12.8 11 6.7 0.1 6.9 3 3 4 7 7 7 0 Flagellar hook-associated protein 2 N-terminus ABC_tran PF00005.27 gi|300711798|ref|YP_003737612.1| - 0.11 13.0 9.6 0.43 11.1 0.0 4.5 3 2 0 3 3 3 0 ABC transporter Fib_alpha PF08702.10 gi|300711798|ref|YP_003737612.1| - 0.47 10.6 34.1 0.085 13.0 3.6 5.7 2 2 2 5 5 5 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 gi|300711798|ref|YP_003737612.1| - 0.95 9.5 32.8 0.78 9.8 1.9 7.0 2 2 4 9 9 9 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 gi|300711798|ref|YP_003737612.1| - 1.4 8.9 43.6 0.044 13.8 3.9 6.5 2 2 7 9 9 9 0 Laminin Domain II Bacillus_HBL PF05791.11 gi|300711798|ref|YP_003737612.1| - 1.5 8.6 9.7 3.8 7.3 0.9 3.4 3 1 0 3 3 2 0 Bacillus haemolytic enterotoxin (HBL) FapA PF03961.13 gi|300711798|ref|YP_003737612.1| - 2.4 6.6 51.7 0.14 10.7 0.4 5.4 1 1 2 5 5 5 0 Flagellar Assembly Protein A MAD PF05557.13 gi|300711798|ref|YP_003737612.1| - 3.1 6.0 86.2 0.16 10.3 35.9 3.8 1 1 3 4 4 4 0 Mitotic checkpoint protein Metallophos PF00149.28 gi|300711799|ref|YP_003737613.1| - 1.6e-11 45.1 0.5 2.3e-11 44.6 0.5 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|300711799|ref|YP_003737613.1| - 2.2e-11 44.2 0.2 4.8e-11 43.1 0.2 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Response_reg PF00072.24 gi|300711799|ref|YP_003737613.1| - 0.034 14.3 0.0 0.076 13.2 0.0 1.5 1 0 0 1 1 1 0 Response regulator receiver domain HTH_24 PF13412.6 gi|300711800|ref|YP_003737614.1| - 3.2e-09 36.2 0.0 4.8e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300711800|ref|YP_003737614.1| - 3.3e-07 30.1 0.1 4.5e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|300711800|ref|YP_003737614.1| - 1.8e-06 27.5 0.2 3e-06 26.8 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|300711800|ref|YP_003737614.1| - 0.00014 21.7 0.0 0.00021 21.2 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300711800|ref|YP_003737614.1| - 0.00027 20.7 0.6 0.00045 20.0 0.6 1.6 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|300711800|ref|YP_003737614.1| - 0.00035 20.6 0.1 0.00052 20.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|300711800|ref|YP_003737614.1| - 0.00058 19.7 0.0 0.00078 19.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|300711800|ref|YP_003737614.1| - 0.00089 19.1 0.0 0.001 18.9 0.0 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_28 PF13518.6 gi|300711800|ref|YP_003737614.1| - 0.0009 19.3 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|300711800|ref|YP_003737614.1| - 0.0016 18.4 0.0 0.0019 18.2 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|300711800|ref|YP_003737614.1| - 0.0022 18.3 0.1 0.005 17.2 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator TrmB PF01978.19 gi|300711800|ref|YP_003737614.1| - 0.0031 17.4 0.1 0.004 17.0 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Replic_Relax PF13814.6 gi|300711800|ref|YP_003737614.1| - 0.0038 17.3 0.1 0.0051 16.9 0.1 1.1 1 0 0 1 1 1 1 Replication-relaxation HTH_27 PF13463.6 gi|300711800|ref|YP_003737614.1| - 0.0049 17.3 0.1 0.0066 16.9 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|300711800|ref|YP_003737614.1| - 0.0051 16.7 0.0 0.008 16.1 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_29 PF13551.6 gi|300711800|ref|YP_003737614.1| - 0.0057 16.6 0.0 0.01 15.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_54 PF18607.1 gi|300711800|ref|YP_003737614.1| - 0.0099 15.9 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 1 ParA helix turn helix domain PadR PF03551.14 gi|300711800|ref|YP_003737614.1| - 0.013 15.4 0.0 0.02 14.9 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_23 PF13384.6 gi|300711800|ref|YP_003737614.1| - 0.039 13.8 0.0 0.067 13.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|300711800|ref|YP_003737614.1| - 0.07 12.8 0.0 0.2 11.4 0.0 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_12 PF08461.10 gi|300711800|ref|YP_003737614.1| - 0.1 12.5 0.1 0.26 11.3 0.1 1.9 1 1 1 2 2 2 0 Ribonuclease R winged-helix domain HTH_micro PF17007.5 gi|300711800|ref|YP_003737614.1| - 0.12 11.2 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 HTH-like HTH_36 PF13730.6 gi|300711800|ref|YP_003737614.1| - 0.13 12.3 0.0 0.83 9.7 0.0 2.1 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_CodY PF08222.11 gi|300711800|ref|YP_003737614.1| - 0.16 11.6 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain AAA PF00004.29 gi|300711801|ref|YP_003737615.1| - 1.6e-45 154.7 1.2 3.5e-45 153.7 0.1 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|300711801|ref|YP_003737615.1| - 4.4e-14 52.0 2.7 1.4e-13 50.4 2.7 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|300711801|ref|YP_003737615.1| - 2.3e-08 34.4 0.0 7.5e-08 32.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|300711801|ref|YP_003737615.1| - 7.2e-08 32.3 0.0 2e-07 30.9 0.0 1.8 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|300711801|ref|YP_003737615.1| - 1.6e-06 28.1 0.3 1.9e-05 24.7 0.3 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|300711801|ref|YP_003737615.1| - 1.9e-05 24.9 1.6 0.001 19.3 0.3 2.9 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|300711801|ref|YP_003737615.1| - 2.6e-05 24.7 5.8 0.00037 20.9 0.0 3.4 3 2 1 4 4 4 1 AAA ATPase domain AAA_17 PF13207.6 gi|300711801|ref|YP_003737615.1| - 5.2e-05 23.7 6.2 0.036 14.5 0.1 2.9 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|300711801|ref|YP_003737615.1| - 6.6e-05 23.5 0.3 0.0068 16.9 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|300711801|ref|YP_003737615.1| - 0.00017 21.2 0.5 0.037 13.5 0.0 2.5 2 1 0 2 2 2 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|300711801|ref|YP_003737615.1| - 0.00042 19.7 0.3 0.0048 16.3 0.1 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI Prot_ATP_ID_OB PF16450.5 gi|300711801|ref|YP_003737615.1| - 0.00072 19.5 0.4 0.0017 18.3 0.1 1.8 2 0 0 2 2 1 1 Proteasomal ATPase OB C-terminal domain DUF815 PF05673.13 gi|300711801|ref|YP_003737615.1| - 0.00078 18.7 0.0 0.0017 17.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) TIP49 PF06068.13 gi|300711801|ref|YP_003737615.1| - 0.00092 18.5 1.5 0.0018 17.5 0.0 2.1 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_14 PF13173.6 gi|300711801|ref|YP_003737615.1| - 0.0014 18.7 0.2 0.0099 15.9 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|300711801|ref|YP_003737615.1| - 0.0014 18.4 3.2 0.012 15.3 0.1 2.7 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|300711801|ref|YP_003737615.1| - 0.0019 17.9 0.1 0.055 13.2 0.1 2.7 1 1 0 1 1 1 1 Sigma-54 interaction domain GrpE PF01025.19 gi|300711801|ref|YP_003737615.1| - 0.0023 17.6 4.9 0.0023 17.6 4.9 2.1 3 0 0 3 3 2 1 GrpE NACHT PF05729.12 gi|300711801|ref|YP_003737615.1| - 0.0027 17.7 0.4 0.096 12.6 0.0 2.6 2 1 1 3 3 3 1 NACHT domain ATPase PF06745.13 gi|300711801|ref|YP_003737615.1| - 0.0036 16.7 6.7 0.078 12.3 0.0 3.5 3 1 0 4 4 4 1 KaiC IstB_IS21 PF01695.17 gi|300711801|ref|YP_003737615.1| - 0.0039 16.9 0.0 0.011 15.5 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 gi|300711801|ref|YP_003737615.1| - 0.004 17.3 0.3 0.018 15.2 0.0 2.3 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|300711801|ref|YP_003737615.1| - 0.0046 17.3 0.0 0.012 16.0 0.0 1.8 1 0 0 1 1 1 1 RNA helicase Atg14 PF10186.9 gi|300711801|ref|YP_003737615.1| - 0.0058 15.8 0.7 0.0089 15.1 0.7 1.3 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2334 PF10096.9 gi|300711801|ref|YP_003737615.1| - 0.007 16.0 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) AAA_25 PF13481.6 gi|300711801|ref|YP_003737615.1| - 0.0076 15.8 6.4 0.21 11.1 0.1 3.6 2 1 0 3 3 3 1 AAA domain AAA_3 PF07726.11 gi|300711801|ref|YP_003737615.1| - 0.019 14.8 0.3 0.09 12.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) LRRFIP PF09738.9 gi|300711801|ref|YP_003737615.1| - 0.02 14.4 8.7 0.04 13.4 8.7 1.4 1 0 0 1 1 1 0 LRRFIP family Parvo_NS1 PF01057.17 gi|300711801|ref|YP_003737615.1| - 0.026 13.6 0.0 0.072 12.2 0.0 1.7 2 0 0 2 2 1 0 Parvovirus non-structural protein NS1 TniB PF05621.11 gi|300711801|ref|YP_003737615.1| - 0.026 13.9 0.0 2.1 7.7 0.0 2.5 1 1 1 2 2 2 0 Bacterial TniB protein Creatininase PF02633.14 gi|300711801|ref|YP_003737615.1| - 0.031 13.7 0.0 0.066 12.7 0.0 1.5 1 0 0 1 1 1 0 Creatinine amidohydrolase Sigma54_activ_2 PF14532.6 gi|300711801|ref|YP_003737615.1| - 0.033 14.3 0.0 0.1 12.7 0.0 1.8 1 0 0 1 1 1 0 Sigma-54 interaction domain TsaE PF02367.17 gi|300711801|ref|YP_003737615.1| - 0.045 13.7 0.0 0.096 12.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 gi|300711801|ref|YP_003737615.1| - 0.068 13.1 1.9 0.65 9.9 0.0 2.9 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|300711801|ref|YP_003737615.1| - 0.1 13.1 3.0 0.29 11.6 0.0 2.8 1 1 1 2 2 2 0 ABC transporter AAA_28 PF13521.6 gi|300711801|ref|YP_003737615.1| - 0.11 12.7 5.7 0.03 14.6 0.9 2.7 3 1 0 3 3 1 0 AAA domain SHE3 PF17078.5 gi|300711801|ref|YP_003737615.1| - 0.12 12.0 8.5 0.25 11.1 8.5 1.5 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF4241 PF14025.6 gi|300711801|ref|YP_003737615.1| - 0.28 11.5 2.2 2.7 8.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4241) bZIP_1 PF00170.21 gi|300711801|ref|YP_003737615.1| - 0.29 11.3 7.2 11 6.2 0.1 2.9 1 1 1 2 2 2 0 bZIP transcription factor AAA_11 PF13086.6 gi|300711801|ref|YP_003737615.1| - 1.1 9.0 7.6 0.79 9.5 0.1 2.4 1 1 1 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|300711801|ref|YP_003737615.1| - 1.7 9.1 7.2 14 6.2 0.0 2.7 2 1 0 2 2 2 0 AAA domain Dzip-like_N PF13815.6 gi|300711801|ref|YP_003737615.1| - 2.7 8.0 6.4 1 9.3 3.1 2.1 2 0 0 2 2 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal YabA PF06156.13 gi|300711801|ref|YP_003737615.1| - 4.6 7.9 7.4 51 4.6 5.8 2.8 2 1 0 2 2 2 0 Initiation control protein YabA SlyX PF04102.12 gi|300711801|ref|YP_003737615.1| - 6.1 7.5 7.3 7.2 7.3 0.8 3.1 1 1 1 2 2 2 0 SlyX ZapB PF06005.12 gi|300711801|ref|YP_003737615.1| - 6.3 7.3 12.2 14 6.2 10.1 2.8 2 1 0 2 2 1 0 Cell division protein ZapB Hexapep PF00132.24 gi|300711802|ref|YP_003737616.1| - 3e-13 48.9 5.6 1.2e-05 24.8 0.1 4.3 3 2 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300711802|ref|YP_003737616.1| - 0.0001 21.9 7.5 0.00072 19.3 1.2 3.4 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.14 gi|300711802|ref|YP_003737616.1| - 0.0013 19.1 0.0 0.0019 18.6 0.0 1.2 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal PsbH PF00737.20 gi|300711803|ref|YP_003737617.1| - 0.55 10.0 2.1 0.8 9.5 1.9 1.3 1 1 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein VapB_antitoxin PF09957.9 gi|300711806|ref|YP_003737620.1| - 0.02 14.8 0.3 0.027 14.4 0.3 1.2 1 0 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB HTH_24 PF13412.6 gi|300711806|ref|YP_003737620.1| - 0.078 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Bactofilin PF04519.13 gi|300711807|ref|YP_003737621.1| - 1.4e-13 51.0 11.1 2.4e-10 40.6 0.8 3.7 2 2 1 3 3 3 3 Polymer-forming cytoskeletal Hexapep PF00132.24 gi|300711807|ref|YP_003737621.1| - 0.00071 19.2 11.5 2.4 8.0 0.1 5.5 5 2 1 6 6 6 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300711807|ref|YP_003737621.1| - 0.0049 16.6 10.4 0.17 11.7 0.0 4.9 4 1 0 4 4 4 1 Hexapeptide repeat of succinyl-transferase DUF3494 PF11999.8 gi|300711807|ref|YP_003737621.1| - 0.0095 15.6 0.3 0.12 11.9 0.3 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3494) DUF3672 PF12421.8 gi|300711807|ref|YP_003737621.1| - 0.23 11.4 0.9 6.9 6.6 0.0 3.0 2 1 1 3 3 3 0 Fibronectin type III protein Fer4_7 PF12838.7 gi|300711808|ref|YP_003737622.1| - 3.8e-12 46.6 21.2 1.7e-06 28.5 7.9 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300711808|ref|YP_003737622.1| - 1.4e-10 40.6 14.3 6.9e-07 28.8 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|300711808|ref|YP_003737622.1| - 7.2e-08 32.5 5.3 1.7e-07 31.3 5.5 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300711808|ref|YP_003737622.1| - 5.2e-07 29.7 18.0 5e-05 23.3 7.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|300711808|ref|YP_003737622.1| - 5.3e-06 26.8 1.6 0.014 15.9 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300711808|ref|YP_003737622.1| - 6.9e-06 26.9 5.3 0.00026 21.8 0.9 2.5 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|300711808|ref|YP_003737622.1| - 1.3e-05 25.2 11.3 8.3e-05 22.6 11.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300711808|ref|YP_003737622.1| - 1.9e-05 24.5 14.2 5.3e-05 23.1 6.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|300711808|ref|YP_003737622.1| - 2.6e-05 24.7 1.5 0.033 14.7 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|300711808|ref|YP_003737622.1| - 5.8e-05 23.3 6.4 0.00085 19.5 3.4 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300711808|ref|YP_003737622.1| - 0.00025 20.9 11.0 0.0032 17.5 3.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|300711808|ref|YP_003737622.1| - 0.00067 19.8 0.2 0.00072 19.7 0.2 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_4 PF12800.7 gi|300711808|ref|YP_003737622.1| - 0.00096 19.5 1.8 0.00096 19.5 1.8 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_3 PF12798.7 gi|300711808|ref|YP_003737622.1| - 0.0024 18.7 4.1 0.0024 18.7 4.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|300711808|ref|YP_003737622.1| - 0.0026 18.3 14.2 0.012 16.2 14.2 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I ETF PF01012.21 gi|300711809|ref|YP_003737623.1| - 1e-36 126.6 0.1 1.3e-36 126.2 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain AAA_17 PF13207.6 gi|300711809|ref|YP_003737623.1| - 0.14 12.6 0.0 0.25 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ETF_alpha PF00766.19 gi|300711810|ref|YP_003737624.1| - 6.2e-26 90.2 0.3 1.7e-25 88.8 0.1 1.9 2 0 0 2 2 2 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|300711810|ref|YP_003737624.1| - 1.8e-19 70.3 0.0 8.6e-19 68.1 0.0 2.0 1 1 0 1 1 1 1 Electron transfer flavoprotein domain MerR-DNA-bind PF09278.11 gi|300711810|ref|YP_003737624.1| - 0.27 11.8 1.4 0.93 10.1 0.1 2.4 1 1 2 3 3 3 0 MerR, DNA binding FAD_binding_3 PF01494.19 gi|300711811|ref|YP_003737625.1| - 1.2e-07 31.3 4.2 0.00068 19.0 1.1 2.8 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|300711811|ref|YP_003737625.1| - 2.6e-07 30.4 0.1 4.1e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300711811|ref|YP_003737625.1| - 1.2e-06 27.9 1.3 3e-05 23.3 1.3 2.2 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300711811|ref|YP_003737625.1| - 2.2e-06 27.2 3.1 0.00042 19.6 0.3 2.8 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|300711811|ref|YP_003737625.1| - 6.3e-06 25.6 0.2 1.3e-05 24.5 0.2 1.4 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|300711811|ref|YP_003737625.1| - 1.1e-05 25.2 4.0 0.0008 19.1 1.6 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|300711811|ref|YP_003737625.1| - 4.4e-05 23.6 1.1 0.00014 22.0 0.5 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain ETF_QO PF05187.13 gi|300711811|ref|YP_003737625.1| - 0.0013 18.9 0.1 0.0022 18.1 0.1 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S HI0933_like PF03486.14 gi|300711811|ref|YP_003737625.1| - 0.0055 15.5 2.2 0.007 15.1 1.3 1.6 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|300711811|ref|YP_003737625.1| - 0.022 14.0 0.5 0.035 13.4 0.5 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|300711811|ref|YP_003737625.1| - 0.086 12.2 0.0 0.2 11.0 0.0 1.5 1 0 0 1 1 1 0 ThiF family HopA1 PF17914.1 gi|300711811|ref|YP_003737625.1| - 0.16 11.7 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 HopA1 effector protein family GIDA PF01134.22 gi|300711811|ref|YP_003737625.1| - 0.31 10.1 5.1 0.11 11.6 2.6 1.4 2 0 0 2 2 2 0 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|300711811|ref|YP_003737625.1| - 0.36 9.6 0.8 6.3 5.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_2 PF12797.7 gi|300711811|ref|YP_003737625.1| - 3.7 7.9 5.4 0.45 10.7 0.5 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain Acetyltransf_1 PF00583.25 gi|300711813|ref|YP_003737627.1| - 3.1e-11 43.5 0.1 5.3e-11 42.8 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|300711813|ref|YP_003737627.1| - 3.4e-11 43.5 0.0 4.4e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300711813|ref|YP_003737627.1| - 2e-06 28.1 0.0 3.9e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|300711813|ref|YP_003737627.1| - 3.2e-05 24.6 0.1 5.9e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300711813|ref|YP_003737627.1| - 3.5e-05 23.8 0.0 6.4e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300711813|ref|YP_003737627.1| - 0.007 16.5 0.0 0.025 14.7 0.0 1.9 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase UBA_4 PF14555.6 gi|300711813|ref|YP_003737627.1| - 0.16 11.8 0.0 0.36 10.7 0.0 1.6 1 0 0 1 1 1 0 UBA-like domain Bac_luciferase PF00296.20 gi|300711814|ref|YP_003737628.1| - 1.8e-58 198.4 6.8 2.4e-58 198.0 6.8 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase DSS1_SEM1 PF05160.13 gi|300711814|ref|YP_003737628.1| - 0.17 12.0 0.7 0.38 10.9 0.7 1.5 1 0 0 1 1 1 0 DSS1/SEM1 family ATPgrasp_Ter PF15632.6 gi|300711815|ref|YP_003737629.1| - 7.9e-05 22.4 0.0 0.00017 21.4 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 gi|300711815|ref|YP_003737629.1| - 0.00059 19.4 0.1 0.0031 17.1 0.0 2.1 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|300711815|ref|YP_003737629.1| - 0.0022 17.5 0.0 1.3 8.5 0.0 2.2 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus Peripla_BP_4 PF13407.6 gi|300711815|ref|YP_003737629.1| - 0.36 10.4 1.2 16 5.0 0.1 2.3 2 0 0 2 2 2 0 Periplasmic binding protein domain Na_H_antiporter PF03553.14 gi|300711816|ref|YP_003737630.1| - 5.3e-74 249.2 23.8 5.3e-74 249.2 23.8 2.2 2 1 0 2 2 2 1 Na+/H+ antiporter family MMR_HSR1_C PF08438.10 gi|300711817|ref|YP_003737631.1| - 1.9e-28 99.3 0.0 2.8e-28 98.7 0.0 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|300711817|ref|YP_003737631.1| - 2.5e-20 72.7 0.0 1.8e-19 69.9 0.0 2.1 1 1 1 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|300711817|ref|YP_003737631.1| - 1.1e-10 41.4 0.0 5.1e-10 39.3 0.0 2.0 2 0 0 2 2 2 1 TGS domain FeoB_N PF02421.18 gi|300711817|ref|YP_003737631.1| - 4.1e-07 29.7 0.0 3.9e-06 26.5 0.0 2.4 3 0 0 3 3 3 1 Ferrous iron transport protein B RHH_1 PF01402.21 gi|300711819|ref|YP_003737633.1| - 1.1e-06 28.3 0.2 2.3e-06 27.3 0.2 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RBM39linker PF15519.6 gi|300711819|ref|YP_003737633.1| - 0.19 12.8 0.1 0.29 12.2 0.1 1.3 1 0 0 1 1 1 0 linker between RRM2 and RRM3 domains in RBM39 protein Nramp PF01566.18 gi|300711820|ref|YP_003737634.1| - 1.9e-93 313.3 25.1 2.3e-93 313.1 25.1 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Hydantoinase_A PF01968.18 gi|300711821|ref|YP_003737635.1| - 1.2e-98 330.0 14.8 3e-97 325.4 8.3 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|300711821|ref|YP_003737635.1| - 2.2e-49 167.5 2.3 6.9e-49 166.0 0.1 2.5 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.6 gi|300711821|ref|YP_003737635.1| - 0.0056 17.1 1.8 0.4 11.1 0.0 3.1 3 0 0 3 3 3 1 Cell division protein FtsA MutL PF13941.6 gi|300711821|ref|YP_003737635.1| - 0.036 12.7 5.7 0.63 8.6 0.2 2.6 3 0 0 3 3 3 0 MutL protein BcrAD_BadFG PF01869.20 gi|300711821|ref|YP_003737635.1| - 0.17 11.3 4.5 0.45 10.0 4.5 2.1 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family Hydantoinase_B PF02538.14 gi|300711822|ref|YP_003737636.1| - 5.1e-205 681.8 1.7 5.8e-205 681.6 1.7 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Amdase PF17645.1 gi|300711823|ref|YP_003737637.1| - 7.9e-38 130.3 0.0 9.6e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 gi|300711823|ref|YP_003737637.1| - 2e-13 50.7 0.0 2.7e-13 50.3 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase ATP12 PF07542.11 gi|300711823|ref|YP_003737637.1| - 0.03 14.4 0.0 0.049 13.7 0.0 1.3 1 0 0 1 1 1 0 ATP12 chaperone protein SfLAP PF11139.8 gi|300711825|ref|YP_003737639.1| - 1.7e-20 73.4 13.4 2.2e-20 73.1 13.4 1.0 1 0 0 1 1 1 1 Sap, sulfolipid-1-addressing protein DUF1453 PF07301.11 gi|300711825|ref|YP_003737639.1| - 9.3e-05 22.5 0.2 0.00026 21.0 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1453) DUF412 PF04217.13 gi|300711825|ref|YP_003737639.1| - 0.063 13.2 1.3 0.079 12.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function, DUF412 TEX19 PF15553.6 gi|300711825|ref|YP_003737639.1| - 0.22 11.5 0.0 0.32 10.9 0.0 1.3 1 0 0 1 1 1 0 Testis-expressed protein 19 DUF5518 PF17647.1 gi|300711826|ref|YP_003737640.1| - 4.8e-15 55.7 39.4 5.6e-15 55.5 39.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) DUF3094 PF11293.8 gi|300711826|ref|YP_003737640.1| - 0.41 10.4 1.2 0.89 9.3 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) AI-2E_transport PF01594.16 gi|300711827|ref|YP_003737641.1| - 3.6e-40 138.1 33.0 4.4e-40 137.8 33.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter Phage_holin_3_6 PF07332.11 gi|300711827|ref|YP_003737641.1| - 0.019 15.0 5.1 0.019 15.0 5.1 4.4 3 1 0 4 4 4 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3775 PF12616.8 gi|300711828|ref|YP_003737642.1| - 0.66 10.0 4.0 0.39 10.8 1.3 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3775) UbiA PF01040.18 gi|300711829|ref|YP_003737643.1| - 6.6e-10 38.7 22.7 6.6e-10 38.7 22.7 2.4 2 1 0 2 2 2 1 UbiA prenyltransferase family DUF389 PF04087.14 gi|300711830|ref|YP_003737644.1| - 3.9e-25 88.5 24.3 4.3e-25 88.4 22.6 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF389) PvlArgDC PF01862.16 gi|300711830|ref|YP_003737644.1| - 0.018 14.9 0.2 0.044 13.6 0.2 1.6 1 0 0 1 1 1 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Lactamase_B PF00753.27 gi|300711831|ref|YP_003737645.1| - 2e-29 103.0 0.6 2e-29 103.0 0.6 1.8 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300711831|ref|YP_003737645.1| - 2e-05 24.2 0.3 2e-05 24.2 0.3 2.0 2 2 0 2 2 2 1 Beta-lactamase superfamily domain DUF4258 PF14076.6 gi|300711831|ref|YP_003737645.1| - 0.16 12.4 0.0 0.53 10.7 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) Acyl-CoA_dh_1 PF00441.24 gi|300711832|ref|YP_003737646.1| - 6.8e-52 175.7 4.6 1.1e-51 175.0 4.6 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|300711832|ref|YP_003737646.1| - 2.8e-30 105.3 1.1 6e-30 104.2 0.1 2.1 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711832|ref|YP_003737646.1| - 1.2e-27 96.0 0.1 2.2e-27 95.1 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|300711832|ref|YP_003737646.1| - 4.1e-26 91.8 10.8 4.1e-26 91.8 10.8 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 gi|300711832|ref|YP_003737646.1| - 0.00014 21.6 3.5 0.00022 21.0 1.1 2.3 2 1 0 2 2 2 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|300711832|ref|YP_003737646.1| - 0.012 14.7 1.1 0.029 13.5 1.1 1.6 1 1 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal AMP-binding_C PF13193.6 gi|300711832|ref|YP_003737646.1| - 0.12 13.4 0.2 1.1 10.3 0.0 2.4 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain HTH_Tnp_Tc3_2 PF01498.18 gi|300711833|ref|YP_003737647.1| - 6e-05 23.2 0.2 0.00016 21.8 0.2 1.7 2 0 0 2 2 2 1 Transposase HTH_24 PF13412.6 gi|300711833|ref|YP_003737647.1| - 0.0015 18.1 0.1 0.045 13.3 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|300711833|ref|YP_003737647.1| - 0.059 13.2 0.2 0.14 12.0 0.2 1.6 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_32 PF13565.6 gi|300711833|ref|YP_003737647.1| - 0.076 13.6 0.1 0.17 12.5 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain PH_2 PF08458.10 gi|300711833|ref|YP_003737647.1| - 0.15 12.5 0.0 0.46 10.9 0.0 1.7 2 0 0 2 2 2 0 Plant pleckstrin homology-like region Fe_dep_repress PF01325.19 gi|300711833|ref|YP_003737647.1| - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HATPase_c PF02518.26 gi|300711834|ref|YP_003737648.1| - 2.8e-25 89.0 0.0 5e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|300711834|ref|YP_003737648.1| - 2.5e-12 46.7 0.4 2.5e-11 43.4 0.0 2.3 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain HisKA_4TM PF16926.5 gi|300711834|ref|YP_003737648.1| - 1.1e-10 41.4 0.4 2e-10 40.5 0.4 1.5 1 0 0 1 1 1 1 Archaeal 4TM region of histidine kinase HATPase_c_2 PF13581.6 gi|300711834|ref|YP_003737648.1| - 2.5e-05 24.2 0.0 5.9e-05 23.0 0.0 1.7 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|300711834|ref|YP_003737648.1| - 0.00059 19.7 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 GHKL domain Tektin PF03148.14 gi|300711834|ref|YP_003737648.1| - 0.036 12.8 1.1 0.051 12.3 1.1 1.1 1 0 0 1 1 1 0 Tektin family HATPase_c_3 PF13589.6 gi|300711834|ref|YP_003737648.1| - 0.041 13.7 0.0 0.065 13.1 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TctB PF07331.11 gi|300711834|ref|YP_003737648.1| - 0.14 12.4 2.0 0.34 11.2 2.0 1.7 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Response_reg PF00072.24 gi|300711835|ref|YP_003737649.1| - 7.2e-21 74.5 0.0 8.5e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain adh_short_C2 PF13561.6 gi|300711836|ref|YP_003737650.1| - 4.3e-62 209.7 3.4 5e-62 209.5 3.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300711836|ref|YP_003737650.1| - 4.9e-60 202.3 1.7 6.1e-60 202.0 1.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300711836|ref|YP_003737650.1| - 4.2e-16 59.4 0.6 5.6e-16 59.0 0.6 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300711836|ref|YP_003737650.1| - 7.1e-06 25.7 0.2 1.2e-05 24.9 0.2 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|300711836|ref|YP_003737650.1| - 0.0032 16.6 0.2 0.0092 15.1 0.2 1.7 1 1 1 2 2 2 1 RmlD substrate binding domain THF_DHG_CYH_C PF02882.19 gi|300711836|ref|YP_003737650.1| - 0.037 13.3 0.0 0.078 12.3 0.0 1.5 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Acyl-CoA_dh_1 PF00441.24 gi|300711837|ref|YP_003737651.1| - 1.1e-38 132.7 0.7 1.9e-38 132.0 0.7 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|300711837|ref|YP_003737651.1| - 4.6e-20 71.6 0.0 8.4e-20 70.8 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|300711837|ref|YP_003737651.1| - 8.8e-19 68.2 0.4 1.9e-18 67.2 0.4 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|300711837|ref|YP_003737651.1| - 2.1e-17 63.7 0.5 3.8e-17 62.8 0.5 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 gi|300711837|ref|YP_003737651.1| - 0.0012 18.5 0.0 0.049 13.3 0.0 2.2 2 0 0 2 2 2 1 4-hydroxyphenylacetate 3-hydroxylase N terminal APH PF01636.23 gi|300711838|ref|YP_003737652.1| - 8.6e-45 153.5 2.6 1.3e-44 152.9 2.6 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 gi|300711838|ref|YP_003737652.1| - 0.00038 19.9 0.0 0.00066 19.1 0.0 1.3 1 0 0 1 1 1 1 Ecdysteroid kinase DUF1679 PF07914.11 gi|300711838|ref|YP_003737652.1| - 0.17 10.7 0.0 0.25 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) NTP_transf_3 PF12804.7 gi|300711839|ref|YP_003737653.1| - 3.9e-14 53.3 0.0 5.5e-14 52.8 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|300711839|ref|YP_003737653.1| - 1.7e-07 31.1 0.0 2.1e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.19 gi|300711839|ref|YP_003737653.1| - 0.0019 18.0 0.0 0.0047 16.7 0.0 1.7 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glyphos_transf PF04464.14 gi|300711840|ref|YP_003737654.1| - 4.7e-69 233.1 0.0 6e-69 232.8 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TPP_enzyme_N PF02776.18 gi|300711841|ref|YP_003737655.1| - 2.3e-47 160.8 0.1 3.9e-46 156.8 0.1 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|300711841|ref|YP_003737655.1| - 9.3e-23 80.7 0.0 6.5e-22 78.0 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|300711841|ref|YP_003737655.1| - 3.3e-18 65.7 0.0 9.3e-18 64.3 0.0 1.8 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Sugar_tr PF00083.24 gi|300711842|ref|YP_003737656.1| - 5.6e-127 424.3 21.9 6.7e-127 424.1 21.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|300711842|ref|YP_003737656.1| - 5.4e-36 124.3 44.9 2.2e-34 118.9 39.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 gi|300711842|ref|YP_003737656.1| - 6.7e-06 24.8 12.6 3.3e-05 22.5 5.0 2.1 2 0 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 gi|300711842|ref|YP_003737656.1| - 0.00099 17.8 4.6 0.00099 17.8 4.6 3.8 2 2 2 4 4 4 1 MFS/sugar transport protein OATP PF03137.20 gi|300711842|ref|YP_003737656.1| - 1 7.5 5.3 2.6 6.2 1.1 2.5 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family TssN PF17555.2 gi|300711842|ref|YP_003737656.1| - 4 6.8 8.1 9.1 5.6 8.1 1.6 1 0 0 1 1 1 0 Type VI secretion system, TssN Aminotran_1_2 PF00155.21 gi|300711843|ref|YP_003737657.1| - 6.2e-60 203.3 0.0 7.3e-60 203.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|300711843|ref|YP_003737657.1| - 5.5e-12 45.7 0.1 8.7e-12 45.0 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|300711843|ref|YP_003737657.1| - 5.3e-09 35.8 0.0 8.8e-09 35.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|300711843|ref|YP_003737657.1| - 6.5e-06 24.9 0.0 9.2e-06 24.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|300711843|ref|YP_003737657.1| - 0.0004 19.4 0.0 0.00054 19.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_3 PF00202.21 gi|300711843|ref|YP_003737657.1| - 0.0098 14.6 0.0 0.017 13.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-III UPF0180 PF03698.13 gi|300711844|ref|YP_003737658.1| - 0.15 12.3 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) MMPL PF03176.15 gi|300711845|ref|YP_003737659.1| - 7.3e-37 127.0 24.2 1.5e-22 80.0 7.7 2.7 3 0 0 3 3 2 2 MMPL family Patched PF02460.18 gi|300711845|ref|YP_003737659.1| - 1.4e-09 36.7 7.1 2.1e-05 22.8 2.5 2.4 2 0 0 2 2 2 2 Patched family Sterol-sensing PF12349.8 gi|300711845|ref|YP_003737659.1| - 1.1e-08 35.1 7.5 0.00061 19.7 2.3 2.6 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.16 gi|300711845|ref|YP_003737659.1| - 2.9e-07 30.1 21.9 9.6e-05 21.8 4.9 2.2 2 0 0 2 2 2 2 Protein export membrane protein SHOCT PF09851.9 gi|300711845|ref|YP_003737659.1| - 4.7e-05 23.0 10.8 0.00044 19.9 0.9 3.6 3 0 0 3 3 3 2 Short C-terminal domain Spc7 PF08317.11 gi|300711845|ref|YP_003737659.1| - 0.0022 16.9 22.5 0.031 13.1 8.2 2.4 2 0 0 2 2 2 2 Spc7 kinetochore protein bZIP_1 PF00170.21 gi|300711845|ref|YP_003737659.1| - 0.0048 17.0 9.6 1 9.5 1.5 4.0 2 2 1 3 3 3 3 bZIP transcription factor DUF3552 PF12072.8 gi|300711845|ref|YP_003737659.1| - 0.014 14.8 27.1 0.085 12.3 7.3 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF3552) DUF3450 PF11932.8 gi|300711845|ref|YP_003737659.1| - 0.015 14.6 14.8 0.076 12.3 3.3 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) Troponin PF00992.20 gi|300711845|ref|YP_003737659.1| - 0.037 14.3 20.3 0.24 11.7 1.1 3.6 2 1 1 3 3 3 0 Troponin Syntaxin-6_N PF09177.11 gi|300711845|ref|YP_003737659.1| - 0.046 14.3 7.8 0.49 11.0 0.4 2.7 2 0 0 2 2 2 0 Syntaxin 6, N-terminal GvpG PF05120.12 gi|300711845|ref|YP_003737659.1| - 0.068 13.2 4.2 0.14 12.2 0.1 3.3 2 1 0 2 2 2 0 Gas vesicle protein G UPF0449 PF15136.6 gi|300711845|ref|YP_003737659.1| - 0.4 11.2 10.8 0.34 11.4 0.6 3.6 2 2 1 3 3 3 0 Uncharacterised protein family UPF0449 Atg14 PF10186.9 gi|300711845|ref|YP_003737659.1| - 0.54 9.3 3.9 5.7 5.9 0.8 2.2 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Nup54 PF13874.6 gi|300711845|ref|YP_003737659.1| - 0.94 9.6 5.5 15 5.7 0.1 2.4 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 KASH_CCD PF14662.6 gi|300711845|ref|YP_003737659.1| - 0.96 9.2 15.7 0.12 12.2 2.7 2.6 3 0 0 3 3 3 0 Coiled-coil region of CCDC155 or KASH DUF4201 PF13870.6 gi|300711845|ref|YP_003737659.1| - 1.1 8.9 5.4 2.8 7.6 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) ACR_tran PF00873.19 gi|300711845|ref|YP_003737659.1| - 1.4 6.4 19.5 0.021 12.5 2.4 2.3 2 0 0 2 2 2 0 AcrB/AcrD/AcrF family DUF4472 PF14739.6 gi|300711845|ref|YP_003737659.1| - 1.5 9.6 13.2 9.4 7.0 1.3 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4472) DUF812 PF05667.11 gi|300711845|ref|YP_003737659.1| - 1.7 7.4 15.9 0.73 8.6 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF812) ZapB PF06005.12 gi|300711845|ref|YP_003737659.1| - 1.9 9.0 22.2 1 9.9 2.2 3.6 2 2 0 2 2 2 0 Cell division protein ZapB Synaptobrevin PF00957.21 gi|300711845|ref|YP_003737659.1| - 2.2 8.1 4.9 5.6 6.8 0.3 3.8 2 2 0 3 3 3 0 Synaptobrevin Fmp27_WPPW PF10359.9 gi|300711845|ref|YP_003737659.1| - 2.4 6.9 6.0 1 8.1 0.4 2.2 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain ADIP PF11559.8 gi|300711845|ref|YP_003737659.1| - 4.6 7.3 15.6 3.7 7.6 5.4 2.8 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 gi|300711845|ref|YP_003737659.1| - 5.8 7.0 11.6 13 5.8 2.6 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4686 PF15742.5 gi|300711845|ref|YP_003737659.1| - 6.3 5.8 9.7 1.3 8.1 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4686) Jnk-SapK_ap_N PF09744.9 gi|300711845|ref|YP_003737659.1| - 8 6.7 18.9 7.7 6.7 2.2 2.5 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 PAC2 PF09754.9 gi|300711846|ref|YP_003737660.1| - 2.9e-40 138.6 0.0 3.3e-40 138.4 0.0 1.0 1 0 0 1 1 1 1 PAC2 family DivIC PF04977.15 gi|300711846|ref|YP_003737660.1| - 0.012 15.4 1.6 0.015 15.1 0.4 1.7 2 0 0 2 2 2 0 Septum formation initiator kleA_kleC PF17383.2 gi|300711846|ref|YP_003737660.1| - 0.015 15.6 1.0 0.025 14.9 0.5 1.6 2 0 0 2 2 2 0 Uncharacterized KorC regulated protein A FlgN PF05130.12 gi|300711846|ref|YP_003737660.1| - 0.037 14.5 1.8 0.054 14.0 1.8 1.2 1 0 0 1 1 1 0 FlgN protein DoxX PF07681.12 gi|300711847|ref|YP_003737661.1| - 2.2e-11 44.2 12.1 2.2e-11 44.2 12.1 1.8 2 0 0 2 2 2 1 DoxX DoxD PF04173.13 gi|300711847|ref|YP_003737661.1| - 2e-05 24.6 6.1 3.4e-05 23.8 5.6 1.6 1 1 1 2 2 2 1 TQO small subunit DoxD DUF5518 PF17647.1 gi|300711848|ref|YP_003737662.1| - 0.014 15.5 33.1 0.018 15.2 33.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5518) Methyltr_RsmB-F PF01189.17 gi|300711849|ref|YP_003737663.1| - 7.4e-56 189.0 0.0 9.2e-56 188.7 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|300711849|ref|YP_003737663.1| - 2.2e-06 27.5 0.0 3.6e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmF_N PF17125.5 gi|300711849|ref|YP_003737663.1| - 9.4e-06 26.0 0.0 5.6e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 gi|300711849|ref|YP_003737663.1| - 0.00046 20.3 0.0 0.00067 19.8 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 gi|300711849|ref|YP_003737663.1| - 0.014 16.1 0.0 0.036 14.8 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Methyltranf_PUA PF13636.6 gi|300711850|ref|YP_003737664.1| - 2.7e-11 43.2 0.0 5e-11 42.4 0.0 1.5 1 0 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF DUF3796 PF12676.7 gi|300711851|ref|YP_003737665.1| - 0.015 15.7 0.6 0.016 15.7 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF4244 PF14029.6 gi|300711851|ref|YP_003737665.1| - 0.23 10.9 3.2 0.32 10.4 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4244) FixS PF03597.15 gi|300711851|ref|YP_003737665.1| - 0.25 11.1 0.2 0.25 11.1 0.2 2.1 1 1 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type DUF4212 PF13937.6 gi|300711851|ref|YP_003737665.1| - 0.5 10.8 6.5 1.7 9.1 1.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4212) HemY_N PF07219.13 gi|300711851|ref|YP_003737665.1| - 4.4 7.5 6.8 0.5 10.6 1.0 1.9 1 1 1 2 2 2 0 HemY protein N-terminus MFS_1 PF07690.16 gi|300711852|ref|YP_003737666.1| - 3.4e-51 174.2 52.3 2.7e-34 118.6 25.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|300711852|ref|YP_003737666.1| - 4e-09 36.2 36.9 5.4e-09 35.8 36.9 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 gi|300711852|ref|YP_003737666.1| - 6.2e-09 35.2 19.2 5.1e-08 32.2 2.8 2.1 1 1 1 2 2 2 2 MFS_1 like family Nuc_H_symport PF03825.16 gi|300711852|ref|YP_003737666.1| - 2.9e-05 23.2 6.5 0.017 14.1 0.7 2.5 1 1 2 3 3 3 2 Nucleoside H+ symporter Sugar_tr PF00083.24 gi|300711852|ref|YP_003737666.1| - 3.8e-05 22.7 26.4 0.016 14.0 6.9 2.7 2 2 0 2 2 2 2 Sugar (and other) transporter LacY_symp PF01306.19 gi|300711852|ref|YP_003737666.1| - 0.00031 19.7 4.2 0.00031 19.7 4.2 1.6 2 0 0 2 2 2 1 LacY proton/sugar symporter MeaB PF03308.16 gi|300711852|ref|YP_003737666.1| - 0.0041 16.2 0.5 0.0063 15.5 0.5 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB OATP PF03137.20 gi|300711852|ref|YP_003737666.1| - 0.015 13.6 0.6 0.015 13.6 0.6 2.4 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family DUF790 PF05626.11 gi|300711853|ref|YP_003737667.1| - 1.5e-136 455.2 0.0 1.9e-136 454.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF790) CW_binding_2 PF04122.12 gi|300711853|ref|YP_003737667.1| - 0.25 12.0 2.0 1.8 9.3 0.3 2.9 3 0 0 3 3 3 0 Putative cell wall binding repeat 2 ResIII PF04851.15 gi|300711855|ref|YP_003737669.1| - 6.4e-24 84.9 0.0 6.7e-23 81.5 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|300711855|ref|YP_003737669.1| - 7.7e-19 67.9 0.0 1.1e-18 67.4 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 gi|300711855|ref|YP_003737669.1| - 5.3e-16 58.9 0.0 2.1e-15 57.0 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain XPB_DRD PF18458.1 gi|300711855|ref|YP_003737669.1| - 4.9e-15 55.1 2.3 2.8e-14 52.7 1.9 2.4 2 0 0 2 2 2 1 Xeroderma pigmentosum group B helicase damage recognition domain DEAD PF00270.29 gi|300711855|ref|YP_003737669.1| - 2.2e-07 30.8 0.0 2.1e-06 27.6 0.0 2.3 1 1 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.23 gi|300711855|ref|YP_003737669.1| - 8.5e-06 24.7 0.0 0.018 13.8 0.0 2.2 2 0 0 2 2 2 2 SNF2 family N-terminal domain AAA_22 PF13401.6 gi|300711855|ref|YP_003737669.1| - 0.1 12.9 0.2 2 8.7 0.0 3.0 3 1 0 3 3 3 0 AAA domain DUF308 PF03729.13 gi|300711856|ref|YP_003737670.1| - 5.4e-18 65.1 42.1 8.6e-11 42.0 11.5 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) CrgA PF06781.12 gi|300711856|ref|YP_003737670.1| - 1.8 8.7 0.0 1.8 8.7 0.0 3.0 3 0 0 3 3 3 0 Cell division protein CrgA TMEM237 PF15383.6 gi|300711856|ref|YP_003737670.1| - 3.7 6.6 0.0 3.7 6.6 0.0 2.5 3 0 0 3 3 3 0 Transmembrane protein 237 GrpE PF01025.19 gi|300711857|ref|YP_003737671.1| - 1.7e-45 154.7 8.1 2e-45 154.4 8.1 1.0 1 0 0 1 1 1 1 GrpE Sugarporin_N PF11471.8 gi|300711857|ref|YP_003737671.1| - 0.00055 19.8 1.8 0.00055 19.8 1.8 2.9 2 1 1 3 3 2 1 Maltoporin periplasmic N-terminal extension Exonuc_VII_L PF02601.15 gi|300711857|ref|YP_003737671.1| - 0.0019 17.9 1.7 0.0019 17.9 1.7 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit PKcGMP_CC PF16808.5 gi|300711857|ref|YP_003737671.1| - 0.0022 17.8 10.0 0.0064 16.3 10.0 1.9 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase AAA_32 PF13654.6 gi|300711857|ref|YP_003737671.1| - 0.0026 16.6 6.9 0.0033 16.3 6.9 1.0 1 0 0 1 1 1 1 AAA domain DUF148 PF02520.17 gi|300711857|ref|YP_003737671.1| - 0.013 15.6 3.5 0.021 14.9 3.5 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF148 CLZ PF16526.5 gi|300711857|ref|YP_003737671.1| - 0.026 14.9 8.9 0.026 14.9 8.9 2.4 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FmiP_Thoc5 PF09766.9 gi|300711857|ref|YP_003737671.1| - 0.027 13.8 8.4 0.036 13.4 8.4 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 Bap31_Bap29_C PF18035.1 gi|300711857|ref|YP_003737671.1| - 0.029 14.4 14.8 0.045 13.8 0.5 3.2 2 1 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain Atg14 PF10186.9 gi|300711857|ref|YP_003737671.1| - 0.033 13.3 3.9 0.045 12.8 3.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fmp27_WPPW PF10359.9 gi|300711857|ref|YP_003737671.1| - 0.041 12.8 6.4 0.048 12.5 6.4 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain OrfB_IS605 PF01385.19 gi|300711857|ref|YP_003737671.1| - 0.095 12.9 4.1 0.16 12.2 4.1 1.3 1 0 0 1 1 1 0 Probable transposase DUF3584 PF12128.8 gi|300711857|ref|YP_003737671.1| - 0.099 10.2 11.6 0.11 10.0 11.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Surfac_D-trimer PF09006.11 gi|300711857|ref|YP_003737671.1| - 0.12 12.3 0.2 0.29 11.0 0.1 1.6 2 0 0 2 2 1 0 Lung surfactant protein D coiled-coil trimerisation FapA PF03961.13 gi|300711857|ref|YP_003737671.1| - 0.12 11.0 7.0 0.15 10.6 7.0 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A TarH PF02203.15 gi|300711857|ref|YP_003737671.1| - 0.21 11.5 6.4 1.8 8.5 2.1 2.1 1 1 1 2 2 2 0 Tar ligand binding domain homologue GAT PF03127.14 gi|300711857|ref|YP_003737671.1| - 0.22 11.9 4.1 1.4 9.3 4.2 2.2 2 1 0 2 2 2 0 GAT domain DUF745 PF05335.13 gi|300711857|ref|YP_003737671.1| - 0.24 11.1 7.8 0.1 12.3 3.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Prefoldin_2 PF01920.20 gi|300711857|ref|YP_003737671.1| - 0.38 10.7 16.1 0.093 12.7 8.2 2.3 2 0 0 2 2 2 0 Prefoldin subunit TMF_DNA_bd PF12329.8 gi|300711857|ref|YP_003737671.1| - 0.39 10.7 14.7 0.15 12.1 7.5 2.5 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Fib_alpha PF08702.10 gi|300711857|ref|YP_003737671.1| - 0.5 10.5 4.6 0.62 10.2 1.9 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family SLX9 PF15341.6 gi|300711857|ref|YP_003737671.1| - 0.55 10.6 9.3 0.8 10.1 9.0 1.6 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 V_ATPase_I PF01496.19 gi|300711857|ref|YP_003737671.1| - 0.58 8.0 4.3 0.63 7.9 4.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family KxDL PF10241.9 gi|300711857|ref|YP_003737671.1| - 0.62 10.4 6.0 0.67 10.3 4.3 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein ATG16 PF08614.11 gi|300711857|ref|YP_003737671.1| - 0.79 9.9 18.2 2 8.6 18.0 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Synaptobrevin PF00957.21 gi|300711857|ref|YP_003737671.1| - 0.81 9.5 3.0 1.9 8.3 3.0 1.6 1 0 0 1 1 1 0 Synaptobrevin FlaC_arch PF05377.11 gi|300711857|ref|YP_003737671.1| - 0.96 9.9 8.6 15 6.1 3.6 3.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 gi|300711857|ref|YP_003737671.1| - 1.1 9.3 17.4 16 5.6 16.8 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DLP_helical PF18709.1 gi|300711857|ref|YP_003737671.1| - 1.2 8.2 8.0 1.5 8.0 7.2 1.4 1 1 0 1 1 1 0 Dynamin-like helical domain TMPIT PF07851.13 gi|300711857|ref|YP_003737671.1| - 1.3 8.1 5.2 1.8 7.8 5.2 1.2 1 0 0 1 1 1 0 TMPIT-like protein Med9 PF07544.13 gi|300711857|ref|YP_003737671.1| - 2 8.6 11.2 0.82 9.8 5.1 2.8 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 TPR_MLP1_2 PF07926.12 gi|300711857|ref|YP_003737671.1| - 2 8.5 18.4 0.62 10.1 11.1 2.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 gi|300711857|ref|YP_003737671.1| - 2.2 8.7 16.0 0.73 10.2 7.2 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain HIP1_clath_bdg PF16515.5 gi|300711857|ref|YP_003737671.1| - 2.3 8.9 17.5 1.6 9.4 8.7 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spc7 PF08317.11 gi|300711857|ref|YP_003737671.1| - 2.3 7.0 16.0 1.4 7.7 10.6 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Ax_dynein_light PF10211.9 gi|300711857|ref|YP_003737671.1| - 3.1 7.7 14.8 7.9 6.4 14.7 1.7 1 1 1 2 2 2 0 Axonemal dynein light chain DUF334 PF03904.13 gi|300711857|ref|YP_003737671.1| - 3.7 7.0 9.1 6.9 6.1 9.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF334) Tho2 PF11262.8 gi|300711857|ref|YP_003737671.1| - 5 6.2 6.7 3.7 6.7 5.4 1.4 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Rho_Binding PF08912.11 gi|300711857|ref|YP_003737671.1| - 5.1 8.0 15.1 14 6.6 8.2 2.4 1 1 1 2 2 2 0 Rho Binding DUF4404 PF14357.6 gi|300711857|ref|YP_003737671.1| - 6.1 7.6 12.9 15 6.3 3.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) Med4 PF10018.9 gi|300711857|ref|YP_003737671.1| - 7.9 6.1 16.8 4.6 6.9 6.6 2.7 1 1 2 3 3 3 0 Vitamin-D-receptor interacting Mediator subunit 4 FUSC PF04632.12 gi|300711857|ref|YP_003737671.1| - 7.9 4.9 5.0 9.6 4.6 5.0 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family XhlA PF10779.9 gi|300711857|ref|YP_003737671.1| - 8.2 6.7 8.5 39 4.5 8.3 2.2 1 1 0 1 1 1 0 Haemolysin XhlA SlyX PF04102.12 gi|300711857|ref|YP_003737671.1| - 9.9 6.9 11.5 47 4.7 11.5 2.3 1 1 0 1 1 1 0 SlyX HSP70 PF00012.20 gi|300711859|ref|YP_003737673.1| - 1.7e-241 802.6 18.7 2.1e-239 795.8 18.7 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|300711859|ref|YP_003737673.1| - 2e-18 66.3 0.6 2e-18 66.3 0.6 1.9 2 0 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 gi|300711859|ref|YP_003737673.1| - 0.0019 18.0 0.0 0.0046 16.7 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain StbA PF06406.11 gi|300711859|ref|YP_003737673.1| - 0.0026 17.1 0.1 0.012 14.9 0.1 2.1 2 0 0 2 2 2 1 StbA protein FIVAR PF07554.13 gi|300711859|ref|YP_003737673.1| - 0.0041 17.9 2.3 0.0041 17.9 2.3 2.4 2 0 0 2 2 2 1 FIVAR domain TPR_10 PF13374.6 gi|300711859|ref|YP_003737673.1| - 0.66 9.9 3.6 1.7 8.7 2.4 2.4 1 1 0 1 1 1 0 Tetratricopeptide repeat PspA_IM30 PF04012.12 gi|300711859|ref|YP_003737673.1| - 0.69 9.4 22.3 0.04 13.5 16.6 1.8 2 0 0 2 2 2 0 PspA/IM30 family Ly49 PF08391.10 gi|300711859|ref|YP_003737673.1| - 0.86 10.0 2.3 1.9 8.9 2.3 1.6 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 gi|300711859|ref|YP_003737673.1| - 9.9 6.2 7.4 5.3 7.1 3.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PRA1 PF03208.19 gi|300711860|ref|YP_003737674.1| - 0.14 11.7 2.9 0.17 11.5 2.9 1.1 1 0 0 1 1 1 0 PRA1 family protein NAD_binding_10 PF13460.6 gi|300711861|ref|YP_003737675.1| - 1e-48 165.7 2.4 1.2e-48 165.4 2.4 1.0 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|300711861|ref|YP_003737675.1| - 2.1e-12 47.1 0.0 3.6e-12 46.4 0.0 1.3 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|300711861|ref|YP_003737675.1| - 4.6e-12 45.9 0.0 8.8e-12 45.0 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|300711861|ref|YP_003737675.1| - 1.1e-05 24.6 0.0 1.6e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Semialdhyde_dh PF01118.24 gi|300711861|ref|YP_003737675.1| - 0.0048 17.3 0.2 0.0077 16.7 0.2 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain KR PF08659.10 gi|300711861|ref|YP_003737675.1| - 0.0052 16.7 0.2 1.1 9.1 0.2 2.4 1 1 1 2 2 2 1 KR domain NAD_binding_4 PF07993.12 gi|300711861|ref|YP_003737675.1| - 0.019 14.2 0.0 0.16 11.1 0.0 1.9 1 1 0 2 2 2 0 Male sterility protein F420_oxidored PF03807.17 gi|300711861|ref|YP_003737675.1| - 0.047 14.3 0.1 0.12 13.0 0.1 1.7 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent RmlD_sub_bind PF04321.17 gi|300711861|ref|YP_003737675.1| - 0.051 12.7 0.5 0.076 12.1 0.5 1.5 1 1 0 1 1 1 0 RmlD substrate binding domain DapB_N PF01113.20 gi|300711861|ref|YP_003737675.1| - 0.054 13.6 0.5 0.1 12.7 0.5 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 gi|300711861|ref|YP_003737675.1| - 0.067 13.5 0.4 0.16 12.2 0.1 1.9 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 gi|300711861|ref|YP_003737675.1| - 0.096 12.1 0.1 0.21 11.0 0.1 1.9 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase Rieske PF00355.26 gi|300711862|ref|YP_003737676.1| - 3.9e-15 55.6 0.0 6.5e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|300711862|ref|YP_003737676.1| - 4e-11 42.8 0.0 7.6e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Zip PF02535.22 gi|300711863|ref|YP_003737677.1| - 1.2e-12 47.7 16.5 5.1e-12 45.7 5.1 3.0 1 1 1 2 2 2 2 ZIP Zinc transporter DnaJ_C PF01556.18 gi|300711864|ref|YP_003737678.1| - 1.2e-44 152.0 0.0 1.6e-44 151.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|300711864|ref|YP_003737678.1| - 6.9e-24 83.7 4.0 1.3e-23 82.8 4.0 1.5 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|300711864|ref|YP_003737678.1| - 6e-13 49.0 18.6 1.3e-12 47.9 18.6 1.6 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|300711864|ref|YP_003737678.1| - 0.00015 21.7 16.7 0.0024 17.8 4.1 2.9 2 1 1 3 3 3 2 Tryptophan RNA-binding attenuator protein inhibitory protein TackOD1 PF18551.1 gi|300711864|ref|YP_003737678.1| - 0.0003 20.5 4.4 0.22 11.1 0.2 2.4 1 1 0 2 2 2 2 Thaumarchaeal output domain 1 DZR PF12773.7 gi|300711864|ref|YP_003737678.1| - 0.027 14.5 10.7 0.052 13.6 10.7 1.5 1 0 0 1 1 1 0 Double zinc ribbon RPT PF13446.6 gi|300711864|ref|YP_003737678.1| - 0.085 12.8 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 A repeated domain in UCH-protein GRP PF07172.11 gi|300711864|ref|YP_003737678.1| - 0.32 11.7 18.2 1.3 9.8 18.2 2.1 1 0 0 1 1 1 0 Glycine rich protein family DUF5351 PF17302.2 gi|300711864|ref|YP_003737678.1| - 0.34 11.1 22.7 0.39 10.9 0.4 4.4 4 0 0 4 4 4 0 Family of unknown function (DUF5351) AMP-binding PF00501.28 gi|300711865|ref|YP_003737679.1| - 1.9e-06 26.8 0.0 0.0039 15.8 0.0 2.1 2 0 0 2 2 2 2 AMP-binding enzyme SDF PF00375.18 gi|300711866|ref|YP_003737680.1| - 4e-113 378.4 38.5 4.6e-113 378.2 38.5 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DAD PF02109.16 gi|300711866|ref|YP_003737680.1| - 0.16 12.3 2.5 0.94 9.8 0.0 2.6 2 0 0 2 2 2 0 DAD family DUF1358 PF07096.11 gi|300711866|ref|YP_003737680.1| - 0.16 11.9 4.0 0.12 12.4 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1358) AMP-binding PF00501.28 gi|300711867|ref|YP_003737681.1| - 3.8e-73 246.5 0.0 4.9e-73 246.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|300711867|ref|YP_003737681.1| - 1.8e-23 83.3 0.3 4.4e-23 82.0 0.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|300711867|ref|YP_003737681.1| - 4e-13 49.1 0.1 4e-13 49.1 0.1 3.5 4 0 0 4 4 4 1 Acetyl-coenzyme A synthetase N-terminus DNA_pol_B_thumb PF14791.6 gi|300711869|ref|YP_003737683.1| - 4.3e-20 71.6 0.1 1.2e-19 70.2 0.1 1.8 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_8 PF14716.6 gi|300711869|ref|YP_003737683.1| - 5.5e-20 71.5 4.6 6e-17 61.8 0.5 3.5 2 1 1 3 3 3 1 Helix-hairpin-helix domain HHH_5 PF14520.6 gi|300711869|ref|YP_003737683.1| - 1.1e-15 58.0 1.0 2.5e-12 47.2 0.1 2.8 2 0 0 2 2 2 2 Helix-hairpin-helix domain PHP PF02811.19 gi|300711869|ref|YP_003737683.1| - 7.7e-07 29.6 0.0 3.1e-06 27.6 0.0 2.0 1 1 0 1 1 1 1 PHP domain HHH PF00633.23 gi|300711869|ref|YP_003737683.1| - 1.1e-05 25.0 0.4 0.00086 19.1 0.1 3.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|300711869|ref|YP_003737683.1| - 1.7e-05 24.8 0.5 0.076 13.1 0.1 3.4 2 1 0 2 2 2 2 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.6 gi|300711869|ref|YP_003737683.1| - 0.0022 18.2 0.1 0.0048 17.1 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase beta palm DNA_pol_lambd_f PF10391.9 gi|300711869|ref|YP_003737683.1| - 0.0064 16.3 0.0 0.02 14.7 0.0 1.9 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_3 PF12836.7 gi|300711869|ref|YP_003737683.1| - 0.015 15.5 0.0 32 4.9 0.0 3.6 3 1 0 3 3 3 0 Helix-hairpin-helix motif RNase_P_p30 PF01876.16 gi|300711869|ref|YP_003737683.1| - 0.052 13.0 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 RNase P subunit p30 FlpD PF02662.16 gi|300711870|ref|YP_003737684.1| - 0.23 11.4 0.6 0.37 10.8 0.2 1.6 2 0 0 2 2 2 0 Methyl-viologen-reducing hydrogenase, delta subunit HA PF03457.14 gi|300711870|ref|YP_003737684.1| - 6.6 7.2 6.6 8.5 6.8 2.9 2.5 2 1 0 2 2 2 0 Helicase associated domain Rhomboid PF01694.22 gi|300711871|ref|YP_003737685.1| - 6e-32 110.7 19.8 6e-32 110.7 19.8 1.6 2 0 0 2 2 2 1 Rhomboid family zf-AN1 PF01428.16 gi|300711871|ref|YP_003737685.1| - 6.6e-12 45.4 6.7 9.2e-12 44.9 6.7 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger DUF1751 PF08551.10 gi|300711871|ref|YP_003737685.1| - 7.2e-06 26.5 1.6 7.2e-06 26.5 1.6 2.2 2 1 0 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) Zn-ribbon_8 PF09723.10 gi|300711871|ref|YP_003737685.1| - 7.2 6.8 5.9 3.1 8.0 1.6 2.1 2 0 0 2 2 2 0 Zinc ribbon domain Endonuclease_5 PF04493.14 gi|300711872|ref|YP_003737686.1| - 1.1e-52 178.6 0.0 1.3e-52 178.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease V SHOCT PF09851.9 gi|300711873|ref|YP_003737687.1| - 2.9e-08 33.2 2.1 2.9e-08 33.2 2.1 2.1 2 0 0 2 2 2 1 Short C-terminal domain DUF1707 PF08044.11 gi|300711873|ref|YP_003737687.1| - 1.5e-05 25.0 2.2 0.00011 22.2 0.3 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1707) GvpG PF05120.12 gi|300711873|ref|YP_003737687.1| - 0.0065 16.5 0.8 0.014 15.4 0.2 1.8 2 0 0 2 2 2 1 Gas vesicle protein G adh_short PF00106.25 gi|300711874|ref|YP_003737688.1| - 6.5e-50 169.3 0.0 8e-50 169.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|300711874|ref|YP_003737688.1| - 1.7e-39 135.8 0.0 2.4e-39 135.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|300711874|ref|YP_003737688.1| - 1.5e-09 38.0 0.0 2.4e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 gi|300711874|ref|YP_003737688.1| - 1.2e-06 28.1 0.0 1.7e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 gi|300711874|ref|YP_003737688.1| - 9.9e-05 21.9 0.1 0.00077 19.0 0.1 2.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|300711874|ref|YP_003737688.1| - 0.00087 18.5 0.0 0.0018 17.4 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain DUF4147 PF13660.6 gi|300711875|ref|YP_003737689.1| - 4.9e-78 261.8 0.5 8.6e-78 261.0 0.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|300711875|ref|YP_003737689.1| - 1.6e-32 112.0 5.3 1.7e-32 111.9 3.9 1.8 2 0 0 2 2 2 1 MOFRL family Peptidase_M24 PF00557.24 gi|300711876|ref|YP_003737690.1| - 1.3e-62 211.3 0.6 1.6e-62 210.9 0.6 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|300711876|ref|YP_003737690.1| - 3.7e-19 69.7 0.0 8.2e-19 68.6 0.0 1.6 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain ArsA_ATPase PF02374.15 gi|300711877|ref|YP_003737691.1| - 1.7e-78 263.9 0.0 1e-77 261.3 0.0 2.1 1 1 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 gi|300711877|ref|YP_003737691.1| - 1e-10 41.7 0.0 2.3e-10 40.6 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|300711877|ref|YP_003737691.1| - 1.1e-08 35.2 0.0 1.2e-06 28.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|300711877|ref|YP_003737691.1| - 8.2e-06 25.4 1.2 0.0015 18.0 0.0 3.2 4 0 0 4 4 4 1 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 gi|300711877|ref|YP_003737691.1| - 0.00086 19.0 0.1 0.17 11.5 0.1 2.5 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 gi|300711877|ref|YP_003737691.1| - 0.00095 18.7 0.0 0.0014 18.2 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|300711877|ref|YP_003737691.1| - 0.0042 16.7 0.7 0.069 12.7 0.0 2.9 4 0 0 4 4 4 1 AAA domain CBP_BcsQ PF06564.12 gi|300711877|ref|YP_003737691.1| - 0.0058 16.1 0.0 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA_24 PF13479.6 gi|300711877|ref|YP_003737691.1| - 0.033 13.9 0.0 0.072 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|300711877|ref|YP_003737691.1| - 0.034 13.9 0.0 0.059 13.1 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|300711877|ref|YP_003737691.1| - 0.074 12.3 0.1 0.17 11.1 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin ATPase PF06745.13 gi|300711877|ref|YP_003737691.1| - 0.077 12.3 0.0 0.21 10.9 0.0 1.7 2 0 0 2 2 2 0 KaiC PhoH PF02562.16 gi|300711877|ref|YP_003737691.1| - 0.11 12.0 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein MeaB PF03308.16 gi|300711877|ref|YP_003737691.1| - 0.11 11.5 0.4 1.6 7.7 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|300711877|ref|YP_003737691.1| - 0.22 11.9 0.6 0.43 10.9 0.1 1.8 2 1 0 2 2 2 0 AAA ATPase domain Aminotran_1_2 PF00155.21 gi|300711878|ref|YP_003737692.1| - 6.5e-51 173.6 0.0 7.2e-51 173.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|300711878|ref|YP_003737692.1| - 3.5e-07 29.5 0.0 6.9e-07 28.5 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|300711878|ref|YP_003737692.1| - 6.9e-05 21.9 0.0 0.00011 21.2 0.0 1.3 1 0 0 1 1 1 1 Allinase Aminotran_MocR PF12897.7 gi|300711878|ref|YP_003737692.1| - 0.00019 20.3 0.2 0.0054 15.6 0.2 2.4 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 gi|300711878|ref|YP_003737692.1| - 0.00061 19.2 0.0 0.00099 18.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|300711878|ref|YP_003737692.1| - 0.0085 14.8 0.0 0.028 13.1 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-III DnaJ PF00226.31 gi|300711879|ref|YP_003737693.1| - 1.2e-11 44.6 0.0 2.2e-11 43.7 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain Fer2 PF00111.27 gi|300711879|ref|YP_003737693.1| - 2.1e-11 43.6 0.0 4e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain RPT PF13446.6 gi|300711879|ref|YP_003737693.1| - 0.0035 17.2 0.0 0.011 15.6 0.0 1.7 2 0 0 2 2 2 1 A repeated domain in UCH-protein SnoaL_2 PF12680.7 gi|300711880|ref|YP_003737694.1| - 9.8e-17 61.5 2.2 1.2e-16 61.2 2.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|300711880|ref|YP_003737694.1| - 4.8e-11 42.5 0.6 1e-10 41.5 0.6 1.5 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase NTF2 PF02136.20 gi|300711880|ref|YP_003737694.1| - 7.3e-07 29.8 0.0 7.9e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_4 PF13577.6 gi|300711880|ref|YP_003737694.1| - 2.9e-06 27.4 0.3 3.7e-06 27.1 0.3 1.2 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 gi|300711880|ref|YP_003737694.1| - 1.1e-05 25.7 0.2 1.3e-05 25.4 0.2 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 gi|300711880|ref|YP_003737694.1| - 0.0035 17.7 0.6 0.0086 16.5 0.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) SF3a60_bindingd PF12108.8 gi|300711880|ref|YP_003737694.1| - 0.12 12.3 0.5 0.46 10.4 0.1 2.1 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain CinA PF02464.17 gi|300711881|ref|YP_003737695.1| - 4.7e-57 191.9 0.1 5.3e-57 191.7 0.1 1.0 1 0 0 1 1 1 1 Competence-damaged protein YdjM PF04307.14 gi|300711882|ref|YP_003737696.1| - 2.3e-12 46.5 8.4 2e-11 43.5 8.4 2.0 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|300711882|ref|YP_003737696.1| - 0.0031 17.5 0.2 0.0045 17.0 0.2 1.2 1 0 0 1 1 1 1 Zinc dependent phospholipase C DsbB PF02600.16 gi|300711883|ref|YP_003737697.1| - 0.053 14.0 1.8 0.074 13.5 1.8 1.2 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB PHP_C PF13263.6 gi|300711884|ref|YP_003737698.1| - 2.5e-18 65.6 0.1 4.6e-18 64.7 0.1 1.5 1 0 0 1 1 1 1 PHP-associated zf-C2H2 PF00096.26 gi|300711885|ref|YP_003737699.1| - 0.0014 19.0 0.0 0.037 14.5 0.0 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|300711885|ref|YP_003737699.1| - 0.0041 17.8 0.1 0.45 11.5 0.0 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_6 PF13912.6 gi|300711885|ref|YP_003737699.1| - 0.059 13.4 1.9 3.7 7.7 0.0 2.5 3 0 0 3 3 3 0 C2H2-type zinc finger FOXP-CC PF16159.5 gi|300711885|ref|YP_003737699.1| - 0.16 12.6 1.6 0.26 11.9 0.3 1.9 2 1 0 2 2 2 0 FOXP coiled-coil domain Spt5-NGN PF03439.13 gi|300711886|ref|YP_003737700.1| - 1.5e-24 85.7 0.1 2.4e-24 85.0 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|300711886|ref|YP_003737700.1| - 6.4e-08 32.3 0.8 1.3e-07 31.3 0.3 1.8 2 0 0 2 2 2 1 KOW motif Glyco_hydro_65C PF03633.15 gi|300711886|ref|YP_003737700.1| - 0.11 12.4 0.2 0.19 11.7 0.2 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain DbpA PF03880.15 gi|300711886|ref|YP_003737700.1| - 0.14 12.2 0.3 0.31 11.1 0.1 1.7 2 0 0 2 2 2 0 DbpA RNA binding domain SecE PF00584.20 gi|300711887|ref|YP_003737701.1| - 8.6e-05 22.4 1.0 0.00011 22.0 1.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex SLC3A2_N PF16028.5 gi|300711887|ref|YP_003737701.1| - 0.079 12.5 1.0 0.1 12.2 1.0 1.1 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus YobH PF13996.6 gi|300711888|ref|YP_003737702.1| - 8.5 6.5 7.3 0.36 10.9 0.2 2.5 2 0 0 2 2 2 0 YobH-like protein Iron_transport PF10634.9 gi|300711889|ref|YP_003737703.1| - 1.1e-05 25.6 0.0 0.0019 18.4 0.0 2.5 2 0 0 2 2 2 2 Fe2+ transport protein TAT_signal PF10518.9 gi|300711889|ref|YP_003737703.1| - 0.047 13.5 0.5 0.088 12.7 0.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Tubulin PF00091.25 gi|300711890|ref|YP_003737704.1| - 4.9e-41 141.1 0.5 7.6e-41 140.5 0.5 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|300711890|ref|YP_003737704.1| - 9.7e-37 125.2 1.5 3.4e-36 123.4 1.5 2.0 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 gi|300711890|ref|YP_003737704.1| - 0.0018 18.2 0.3 0.0018 18.2 0.3 2.4 3 0 0 3 3 3 1 NAD(P)H-binding Tubulin_2 PF13809.6 gi|300711890|ref|YP_003737704.1| - 0.025 13.8 8.3 0.079 12.1 2.2 2.7 1 1 1 2 2 2 0 Tubulin like tRNA_deacylase PF04414.12 gi|300711891|ref|YP_003737705.1| - 2.6e-64 216.5 0.0 3.5e-64 216.1 0.0 1.2 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Na_Ca_ex PF01699.24 gi|300711892|ref|YP_003737706.1| - 5.5e-15 55.6 33.0 1.8e-10 40.9 8.6 2.6 3 0 0 3 3 3 2 Sodium/calcium exchanger protein Shikimate_dh_N PF08501.11 gi|300711893|ref|YP_003737707.1| - 1.2e-28 99.2 0.0 3e-28 97.9 0.0 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|300711893|ref|YP_003737707.1| - 3.1e-14 53.2 0.0 8.5e-14 51.8 0.0 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 gi|300711893|ref|YP_003737707.1| - 1.4e-12 47.1 0.8 3.1e-12 46.0 0.8 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain THF_DHG_CYH_C PF02882.19 gi|300711893|ref|YP_003737707.1| - 1.4e-05 24.5 0.0 0.0011 18.3 0.0 2.1 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 gi|300711893|ref|YP_003737707.1| - 0.00041 20.9 0.1 0.00078 20.0 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|300711893|ref|YP_003737707.1| - 0.0008 18.8 0.0 0.0014 18.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|300711893|ref|YP_003737707.1| - 0.0028 17.9 0.1 0.0078 16.5 0.2 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain adh_short PF00106.25 gi|300711893|ref|YP_003737707.1| - 0.012 15.1 1.0 0.03 13.8 0.6 1.8 1 1 0 2 2 2 0 short chain dehydrogenase NAD_binding_7 PF13241.6 gi|300711893|ref|YP_003737707.1| - 0.014 15.9 0.0 0.022 15.2 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding IlvN PF07991.12 gi|300711893|ref|YP_003737707.1| - 0.039 13.5 0.0 0.064 12.8 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain TGT_C1 PF14809.6 gi|300711893|ref|YP_003737707.1| - 0.058 13.7 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 C1 domain of tRNA-guanine transglycosylase dimerisation HHH_5 PF14520.6 gi|300711894|ref|YP_003737708.1| - 8.1e-14 52.0 0.3 1.3e-13 51.4 0.3 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix domain DUF4332 PF14229.6 gi|300711894|ref|YP_003737708.1| - 9.9e-05 22.6 0.1 0.00057 20.1 0.0 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4332) Cdd1 PF11731.8 gi|300711894|ref|YP_003737708.1| - 0.0015 18.7 0.0 0.0023 18.1 0.0 1.2 1 0 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|300711894|ref|YP_003737708.1| - 0.005 16.6 0.0 0.0084 15.9 0.0 1.3 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda TfoX_C PF04994.13 gi|300711894|ref|YP_003737708.1| - 0.19 11.8 0.0 0.3 11.2 0.0 1.2 1 0 0 1 1 1 0 TfoX C-terminal domain HTH_20 PF12840.7 gi|300711895|ref|YP_003737709.1| - 0.043 13.9 0.2 0.082 13.0 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rubredoxin_2 PF18073.1 gi|300711895|ref|YP_003737709.1| - 0.5 10.1 4.1 5 6.9 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-trcl PF13451.6 gi|300711895|ref|YP_003737709.1| - 1.1 9.2 5.8 0.44 10.5 0.5 2.1 1 1 1 2 2 2 0 Probable zinc-ribbon domain NTP_transferase PF00483.23 gi|300711896|ref|YP_003737710.1| - 3e-38 131.8 0.0 3.7e-38 131.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|300711896|ref|YP_003737710.1| - 9e-11 42.4 0.0 1.3e-10 41.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|300711896|ref|YP_003737710.1| - 0.00082 19.0 1.6 0.0069 16.1 0.1 2.8 3 0 0 3 3 3 1 Bacterial transferase hexapeptide (six repeats) IspD PF01128.19 gi|300711896|ref|YP_003737710.1| - 0.0052 16.5 0.0 0.0084 15.9 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Diphthami_syn_2 PF01902.17 gi|300711897|ref|YP_003737711.1| - 2.7e-54 184.0 0.0 4.4e-54 183.3 0.0 1.3 1 1 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|300711897|ref|YP_003737711.1| - 0.11 12.0 0.0 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC DUF373 PF04123.13 gi|300711898|ref|YP_003737712.1| - 1.4e-101 340.3 4.5 1.6e-101 340.1 4.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) Peptidase_S49 PF01343.18 gi|300711899|ref|YP_003737713.1| - 2.5e-39 134.7 0.0 2.5e-38 131.5 0.0 2.0 2 0 0 2 2 2 1 Peptidase family S49 SDH_sah PF01972.16 gi|300711899|ref|YP_003737713.1| - 0.017 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|300711899|ref|YP_003737713.1| - 0.091 12.6 0.0 3.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Clp protease DUF948 PF06103.11 gi|300711900|ref|YP_003737714.1| - 0.17 12.2 14.8 0.96 9.7 2.0 3.5 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 gi|300711900|ref|YP_003737714.1| - 0.97 9.4 26.7 1.8 8.5 8.9 3.0 1 1 1 3 3 3 0 Laminin Domain II DUF3800 PF12686.7 gi|300711900|ref|YP_003737714.1| - 2.8 8.6 5.0 9.8 6.8 5.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) Sulfatase_C PF14707.6 gi|300711900|ref|YP_003737714.1| - 3.9 8.2 15.1 1.1 10.0 0.5 3.5 2 1 1 3 3 3 0 C-terminal region of aryl-sulfatase Dor1 PF04124.12 gi|300711900|ref|YP_003737714.1| - 4.3 5.9 28.1 0.016 13.9 9.8 2.7 1 1 2 3 3 3 0 Dor1-like family AP_endonuc_2 PF01261.24 gi|300711902|ref|YP_003737716.1| - 1.5e-23 83.3 1.3 3.8e-23 82.0 0.6 1.8 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel AAA_25 PF13481.6 gi|300711902|ref|YP_003737716.1| - 0.077 12.6 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain Methyltransf_11 PF08241.12 gi|300711903|ref|YP_003737717.1| - 6.9e-17 61.9 0.0 1.9e-16 60.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300711903|ref|YP_003737717.1| - 8e-16 58.5 0.0 6.2e-15 55.7 0.0 2.2 2 1 1 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300711903|ref|YP_003737717.1| - 2.6e-12 46.8 0.0 5.9e-12 45.6 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300711903|ref|YP_003737717.1| - 3.7e-08 34.0 0.0 1.1e-07 32.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300711903|ref|YP_003737717.1| - 7e-07 29.2 0.0 9.5e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|300711903|ref|YP_003737717.1| - 1.2e-05 25.3 0.0 2.3e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|300711903|ref|YP_003737717.1| - 0.00013 21.7 0.0 0.00023 20.8 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 gi|300711903|ref|YP_003737717.1| - 0.00017 21.2 0.0 0.00029 20.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TrkA_N PF02254.18 gi|300711903|ref|YP_003737717.1| - 0.0012 19.1 0.0 0.0027 18.0 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain Ubie_methyltran PF01209.18 gi|300711903|ref|YP_003737717.1| - 0.0019 17.6 0.0 0.0038 16.6 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|300711903|ref|YP_003737717.1| - 0.004 16.9 0.0 0.0062 16.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|300711903|ref|YP_003737717.1| - 0.005 16.3 0.1 0.0071 15.8 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.19 gi|300711903|ref|YP_003737717.1| - 0.0078 16.3 0.0 0.01 15.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_9 PF08003.11 gi|300711903|ref|YP_003737717.1| - 0.059 12.3 0.0 0.082 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|300711903|ref|YP_003737717.1| - 0.1 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|300711903|ref|YP_003737717.1| - 0.1 12.5 0.0 0.48 10.4 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|300711903|ref|YP_003737717.1| - 0.16 11.5 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase ATP_bind_3 PF01171.20 gi|300711905|ref|YP_003737719.1| - 2.8e-13 50.0 0.0 4.6e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|300711905|ref|YP_003737719.1| - 9.9e-05 22.4 0.0 0.00015 21.9 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 gi|300711905|ref|YP_003737719.1| - 0.00078 18.3 0.0 0.0011 17.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|300711905|ref|YP_003737719.1| - 0.0012 18.0 0.0 0.002 17.3 0.0 1.3 1 0 0 1 1 1 1 NAD synthase zn-ribbon_14 PF16503.5 gi|300711905|ref|YP_003737719.1| - 0.0061 16.0 2.1 0.0061 16.0 2.1 3.0 4 0 0 4 4 4 1 Zinc-ribbon RecR PF02132.15 gi|300711905|ref|YP_003737719.1| - 0.075 12.6 7.9 0.045 13.3 2.5 3.1 3 0 0 3 3 3 0 RecR protein Asn_synthase PF00733.21 gi|300711905|ref|YP_003737719.1| - 0.076 12.7 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 Asparagine synthase ThiI PF02568.14 gi|300711905|ref|YP_003737719.1| - 0.12 12.0 0.0 0.3 10.6 0.0 1.6 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|300711905|ref|YP_003737719.1| - 0.39 10.2 1.7 0.87 9.0 0.0 2.4 2 1 0 2 2 2 0 Queuosine biosynthesis protein QueC zf-ribbon_3 PF13248.6 gi|300711905|ref|YP_003737719.1| - 2.6 7.6 5.3 16 5.1 0.2 3.0 2 0 0 2 2 2 0 zinc-ribbon domain Aldo_ket_red PF00248.21 gi|300711906|ref|YP_003737720.1| - 1.4e-59 201.7 0.0 1.6e-59 201.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Tubulin PF00091.25 gi|300711907|ref|YP_003737721.1| - 1.1e-36 127.0 3.4 2.8e-36 125.6 3.4 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|300711907|ref|YP_003737721.1| - 1.4e-35 121.5 0.6 1.4e-35 121.5 0.6 2.6 2 1 1 3 3 3 1 FtsZ family, C-terminal domain ZT_dimer PF16916.5 gi|300711907|ref|YP_003737721.1| - 0.042 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter ThiF PF00899.21 gi|300711907|ref|YP_003737721.1| - 0.076 12.4 0.5 0.19 11.0 0.1 1.8 1 1 1 2 2 2 0 ThiF family RHH_1 PF01402.21 gi|300711908|ref|YP_003737722.1| - 1e-09 38.0 0.3 1.5e-09 37.4 0.3 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|300711908|ref|YP_003737722.1| - 0.00027 21.1 0.0 0.00027 21.1 0.0 1.0 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family VapB_antitoxin PF09957.9 gi|300711908|ref|YP_003737722.1| - 0.026 14.4 0.1 0.045 13.7 0.1 1.4 1 1 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB DZR PF12773.7 gi|300711909|ref|YP_003737723.1| - 1.1e-10 41.4 25.9 7e-07 29.2 8.7 2.1 1 1 2 3 3 3 3 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|300711909|ref|YP_003737723.1| - 6e-10 38.2 7.2 6.4e-06 25.4 2.9 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|300711909|ref|YP_003737723.1| - 2.3e-09 36.6 6.2 0.00025 20.7 2.6 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|300711909|ref|YP_003737723.1| - 1e-06 29.4 4.8 0.00071 20.3 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon family RHH_1 PF01402.21 gi|300711909|ref|YP_003737723.1| - 0.00036 20.4 1.3 0.00036 20.4 1.3 3.1 3 1 0 3 3 3 1 Ribbon-helix-helix protein, copG family VapB_antitoxin PF09957.9 gi|300711909|ref|YP_003737723.1| - 0.0081 16.0 0.4 0.024 14.6 0.4 1.8 1 1 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB HypA PF01155.19 gi|300711909|ref|YP_003737723.1| - 0.014 15.4 1.1 0.014 15.4 1.1 2.4 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-NADH-PPase PF09297.11 gi|300711909|ref|YP_003737723.1| - 0.027 14.1 8.7 0.74 9.5 0.0 3.2 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Cys_rich_KTR PF14205.6 gi|300711909|ref|YP_003737723.1| - 0.03 14.1 1.1 3.1 7.7 0.3 2.3 2 0 0 2 2 2 0 Cysteine-rich KTR NOB1_Zn_bind PF08772.11 gi|300711909|ref|YP_003737723.1| - 0.035 14.3 7.8 1.1 9.4 2.3 2.4 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc-ribbons_6 PF07191.12 gi|300711909|ref|YP_003737723.1| - 0.12 12.4 7.9 0.72 9.9 4.8 2.2 1 1 1 2 2 2 0 zinc-ribbons PolC_DP2 PF03833.13 gi|300711909|ref|YP_003737723.1| - 0.36 8.6 1.8 0.4 8.5 1.8 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 OrfB_Zn_ribbon PF07282.11 gi|300711909|ref|YP_003737723.1| - 0.51 10.3 9.6 7 6.6 0.1 2.6 1 1 1 2 2 2 0 Putative transposase DNA-binding domain NMD3 PF04981.13 gi|300711909|ref|YP_003737723.1| - 0.56 9.6 6.3 1.1 8.7 6.3 1.4 1 0 0 1 1 1 0 NMD3 family zf_UBZ PF18439.1 gi|300711909|ref|YP_003737723.1| - 0.79 9.4 4.0 21 4.8 0.0 3.0 2 1 1 3 3 3 0 Ubiquitin-Binding Zinc Finger Ribosomal_L32p PF01783.23 gi|300711909|ref|YP_003737723.1| - 0.98 9.7 4.7 1.3 9.3 1.1 2.3 1 1 1 2 2 2 0 Ribosomal L32p protein family Nudix_N_2 PF14803.6 gi|300711909|ref|YP_003737723.1| - 1.2 9.1 13.8 6.1 6.9 0.2 4.2 5 0 0 5 5 4 0 Nudix N-terminal Sgf11 PF08209.11 gi|300711909|ref|YP_003737723.1| - 1.6 8.3 8.2 6.7 6.4 0.6 3.1 2 1 1 3 3 3 0 Sgf11 (transcriptional regulation protein) UPF0547 PF10571.9 gi|300711909|ref|YP_003737723.1| - 1.9 8.7 10.8 3.8 7.7 1.5 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF35_N PF12172.8 gi|300711909|ref|YP_003737723.1| - 2.1 8.3 10.3 7.4 6.6 2.3 3.1 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf_C2H2_10 PF18414.1 gi|300711909|ref|YP_003737723.1| - 2.4 7.8 6.3 8.7 6.0 0.5 2.9 3 0 0 3 3 3 0 C2H2 type zinc-finger DUF3797 PF12677.7 gi|300711909|ref|YP_003737723.1| - 3 7.8 9.7 10 6.1 2.6 2.9 2 2 1 3 3 3 0 Domain of unknown function (DUF3797) Zn-ribbon_8 PF09723.10 gi|300711909|ref|YP_003737723.1| - 5.1 7.3 14.4 1.8 8.8 3.2 3.3 1 1 3 4 4 4 0 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|300711909|ref|YP_003737723.1| - 6.5 6.8 14.0 2.1 8.3 0.3 3.8 3 1 1 4 4 4 0 SprT-like zinc ribbon domain IBR PF01485.21 gi|300711909|ref|YP_003737723.1| - 6.6 7.0 9.1 3.5 7.9 4.2 2.3 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain zf-ISL3 PF14690.6 gi|300711909|ref|YP_003737723.1| - 9.1 7.0 9.5 34 5.2 0.7 3.2 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Pilin_N PF07790.11 gi|300711910|ref|YP_003737724.1| - 6e-18 65.6 6.4 1.1e-17 64.7 6.4 1.4 1 1 0 1 1 1 1 Archaeal Type IV pilin, N-terminal MarR_2 PF12802.7 gi|300711911|ref|YP_003737725.1| - 0.013 15.4 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 MarR family HxlR PF01638.17 gi|300711911|ref|YP_003737725.1| - 0.077 12.9 0.1 0.2 11.5 0.1 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix Peptidase_M24 PF00557.24 gi|300711912|ref|YP_003737726.1| - 3.4e-39 134.7 1.0 4.4e-39 134.3 1.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|300711912|ref|YP_003737726.1| - 2.8e-12 47.4 0.0 6.6e-12 46.2 0.0 1.6 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Hydrolase PF00702.26 gi|300711914|ref|YP_003737728.1| - 3.6e-08 34.0 0.2 1e-07 32.5 0.2 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|300711914|ref|YP_003737728.1| - 5.4e-05 23.3 0.0 7.3e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300711914|ref|YP_003737728.1| - 0.00064 19.7 0.1 0.0018 18.3 0.1 1.8 1 0 0 1 1 1 1 HAD-hyrolase-like CobD_Cbib PF03186.13 gi|300711915|ref|YP_003737729.1| - 5.7e-72 242.2 11.9 6.7e-72 242.0 11.9 1.0 1 0 0 1 1 1 1 CobD/Cbib protein CobS PF02654.15 gi|300711916|ref|YP_003737730.1| - 1.2e-40 140.0 15.5 1.3e-40 139.8 15.5 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase NTP_transf_3 PF12804.7 gi|300711917|ref|YP_003737731.1| - 1.6e-14 54.6 3.5 2.2e-14 54.1 3.2 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain Aminotran_1_2 PF00155.21 gi|300711918|ref|YP_003737732.1| - 8.5e-32 110.7 0.0 1.1e-31 110.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II CbiZ PF01955.18 gi|300711919|ref|YP_003737733.1| - 1.4e-42 146.0 2.4 1.9e-42 145.6 2.4 1.2 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase CobA_CobO_BtuR PF02572.15 gi|300711920|ref|YP_003737734.1| - 6.4e-49 166.5 0.0 8.8e-49 166.1 0.0 1.2 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GATase_3 PF07685.14 gi|300711921|ref|YP_003737735.1| - 6.1e-46 156.5 0.0 8.7e-46 156.0 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|300711921|ref|YP_003737735.1| - 1.2e-19 70.6 0.0 1.9e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|300711921|ref|YP_003737735.1| - 1.3e-16 61.0 0.0 3.4e-16 59.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF1611 PF07755.11 gi|300711921|ref|YP_003737735.1| - 0.064 12.5 0.0 0.62 9.3 0.1 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain HalOD1 PF18545.1 gi|300711922|ref|YP_003737736.1| - 7.8e-18 64.5 0.2 1.1e-17 64.0 0.2 1.2 1 0 0 1 1 1 1 Halobacterial output domain 1 HMGL-like PF00682.19 gi|300711923|ref|YP_003737737.1| - 5.2e-65 219.6 0.7 9e-65 218.8 0.7 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|300711923|ref|YP_003737737.1| - 4.5e-30 104.3 1.4 9e-30 103.3 1.4 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain AP_endonuc_2 PF01261.24 gi|300711923|ref|YP_003737737.1| - 0.0053 16.2 0.0 0.014 14.8 0.0 1.7 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF192 PF02643.15 gi|300711924|ref|YP_003737738.1| - 3.9e-23 81.4 0.0 5e-23 81.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Amino_oxidase PF01593.24 gi|300711925|ref|YP_003737739.1| - 2.2e-22 80.0 2.5 7.8e-22 78.2 2.5 1.9 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|300711925|ref|YP_003737739.1| - 2.3e-15 56.6 0.2 4.4e-15 55.7 0.2 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300711925|ref|YP_003737739.1| - 2.2e-09 37.4 8.6 6.5e-09 35.8 8.6 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300711925|ref|YP_003737739.1| - 9.7e-08 31.6 1.2 0.00039 19.8 0.7 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300711925|ref|YP_003737739.1| - 1e-07 31.4 5.1 1.6e-06 27.5 2.7 2.6 2 1 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|300711925|ref|YP_003737739.1| - 3.8e-07 30.6 0.3 0.00056 20.4 0.4 2.8 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase MCRA PF06100.11 gi|300711925|ref|YP_003737739.1| - 5.3e-07 28.8 0.0 0.26 10.0 0.0 3.3 3 0 0 3 3 3 3 MCRA family FAD_oxidored PF12831.7 gi|300711925|ref|YP_003737739.1| - 4.6e-06 26.3 0.5 0.00025 20.5 0.1 2.8 3 0 0 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300711925|ref|YP_003737739.1| - 4.8e-05 22.2 0.3 0.0013 17.5 0.4 2.5 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|300711925|ref|YP_003737739.1| - 0.00066 19.0 0.4 0.0011 18.4 0.4 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|300711925|ref|YP_003737739.1| - 0.017 14.4 0.4 0.035 13.4 0.4 1.5 1 0 0 1 1 1 0 Thi4 family GIDA PF01134.22 gi|300711925|ref|YP_003737739.1| - 0.054 12.6 0.8 0.11 11.5 0.3 1.7 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|300711925|ref|YP_003737739.1| - 0.054 13.5 0.4 0.56 10.2 0.2 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|300711925|ref|YP_003737739.1| - 0.16 11.8 0.2 0.34 10.8 0.2 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RecA_dep_nuc PF16786.5 gi|300711926|ref|YP_003737740.1| - 0.0059 16.7 0.3 0.0087 16.2 0.3 1.3 1 0 0 1 1 1 1 Recombination enhancement, RecA-dependent nuclease HNH PF01844.23 gi|300711926|ref|YP_003737740.1| - 0.046 13.9 1.0 0.083 13.1 1.0 1.4 1 0 0 1 1 1 0 HNH endonuclease GATase PF00117.28 gi|300711927|ref|YP_003737741.1| - 5.4e-34 117.6 0.0 6.6e-34 117.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|300711927|ref|YP_003737741.1| - 2.5e-14 53.6 0.7 3.7e-12 46.5 0.1 2.9 1 1 1 2 2 2 1 Peptidase C26 DUF3194 PF11419.8 gi|300711928|ref|YP_003737742.1| - 6.9e-06 26.3 1.1 1e-05 25.8 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3194) Prefoldin_2 PF01920.20 gi|300711929|ref|YP_003737743.1| - 2.2e-24 85.5 20.8 2.4e-24 85.3 20.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit FlaC_arch PF05377.11 gi|300711929|ref|YP_003737743.1| - 0.00078 19.8 5.0 0.00078 19.8 5.0 2.5 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) CLZ PF16526.5 gi|300711929|ref|YP_003737743.1| - 0.0015 18.8 5.6 0.0015 18.8 5.6 2.3 2 1 0 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Bap31_Bap29_C PF18035.1 gi|300711929|ref|YP_003737743.1| - 0.0076 16.2 0.5 0.0076 16.2 0.5 2.1 2 0 0 2 2 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain Prefoldin PF02996.17 gi|300711929|ref|YP_003737743.1| - 0.022 14.7 6.2 0.022 14.7 6.2 2.6 1 1 2 3 3 3 0 Prefoldin subunit DUF3584 PF12128.8 gi|300711929|ref|YP_003737743.1| - 0.028 12.0 11.4 0.034 11.7 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Leu_zip PF15294.6 gi|300711929|ref|YP_003737743.1| - 0.037 13.5 12.7 0.044 13.3 12.7 1.0 1 0 0 1 1 1 0 Leucine zipper DUF4795 PF16043.5 gi|300711929|ref|YP_003737743.1| - 0.046 13.3 15.9 0.27 10.8 16.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Phage_GP20 PF06810.11 gi|300711929|ref|YP_003737743.1| - 0.051 13.4 18.7 0.36 10.6 6.5 2.3 1 1 1 2 2 2 0 Phage minor structural protein GP20 XhlA PF10779.9 gi|300711929|ref|YP_003737743.1| - 0.071 13.3 1.6 0.071 13.3 1.6 2.4 2 1 0 2 2 2 0 Haemolysin XhlA Sec34 PF04136.15 gi|300711929|ref|YP_003737743.1| - 0.084 12.7 15.0 0.29 11.0 3.2 2.1 1 1 1 2 2 2 0 Sec34-like family RasGAP_C PF03836.15 gi|300711929|ref|YP_003737743.1| - 0.11 12.7 7.9 1.4 9.1 1.0 2.1 2 0 0 2 2 2 0 RasGAP C-terminus DUF1804 PF08822.11 gi|300711929|ref|YP_003737743.1| - 0.11 12.5 3.1 1 9.3 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) DUF5082 PF16888.5 gi|300711929|ref|YP_003737743.1| - 0.15 12.4 12.5 0.2 12.0 12.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) DUF812 PF05667.11 gi|300711929|ref|YP_003737743.1| - 0.15 10.9 14.5 0.2 10.5 14.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HemX PF04375.14 gi|300711929|ref|YP_003737743.1| - 0.17 11.1 21.3 29 3.8 21.3 2.0 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Laminin_II PF06009.12 gi|300711929|ref|YP_003737743.1| - 0.19 11.7 11.2 0.31 11.0 11.2 1.4 1 1 0 1 1 1 0 Laminin Domain II Radical_SAM_N PF08497.10 gi|300711929|ref|YP_003737743.1| - 0.21 10.8 3.3 0.25 10.5 3.3 1.1 1 0 0 1 1 1 0 Radical SAM N-terminal TssO PF17561.2 gi|300711929|ref|YP_003737743.1| - 0.22 11.6 6.2 3.3 7.8 0.9 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssO CENP-F_leu_zip PF10473.9 gi|300711929|ref|YP_003737743.1| - 0.4 10.7 21.5 0.38 10.8 8.9 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BLOC1_2 PF10046.9 gi|300711929|ref|YP_003737743.1| - 0.42 10.9 12.9 0.2 12.0 2.8 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PRP1_N PF06424.12 gi|300711929|ref|YP_003737743.1| - 0.45 10.9 10.0 0.63 10.4 10.0 1.2 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Sigma70_ner PF04546.13 gi|300711929|ref|YP_003737743.1| - 0.48 10.3 13.3 0.15 11.9 1.2 2.1 1 1 1 2 2 2 0 Sigma-70, non-essential region YojJ PF10372.9 gi|300711929|ref|YP_003737743.1| - 0.51 10.5 7.1 0.13 12.4 1.1 2.2 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus WXG100 PF06013.12 gi|300711929|ref|YP_003737743.1| - 0.57 10.4 10.3 3.7 7.8 2.6 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG PilJ PF13675.6 gi|300711929|ref|YP_003737743.1| - 0.65 10.0 10.3 0.33 11.0 1.7 2.4 1 1 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term TraF_2 PF13729.6 gi|300711929|ref|YP_003737743.1| - 0.81 9.0 9.7 0.43 9.9 0.3 2.0 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein TPR_MLP1_2 PF07926.12 gi|300711929|ref|YP_003737743.1| - 0.82 9.7 22.6 2.8 8.0 22.6 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein EzrA PF06160.12 gi|300711929|ref|YP_003737743.1| - 1 7.4 14.7 1.7 6.7 14.7 1.3 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DUF4988 PF16378.5 gi|300711929|ref|YP_003737743.1| - 1 9.0 5.5 0.7 9.5 0.7 2.0 2 0 0 2 2 2 0 Domain of unknown function DASH_Dad2 PF08654.10 gi|300711929|ref|YP_003737743.1| - 1.2 9.6 13.5 4.4 7.8 3.0 2.4 2 1 0 2 2 2 0 DASH complex subunit Dad2 PspA_IM30 PF04012.12 gi|300711929|ref|YP_003737743.1| - 1.3 8.5 18.5 2.5 7.6 6.2 2.0 1 1 1 2 2 2 0 PspA/IM30 family FUSC PF04632.12 gi|300711929|ref|YP_003737743.1| - 1.7 7.1 4.9 2.3 6.7 4.9 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Exonuc_VII_L PF02601.15 gi|300711929|ref|YP_003737743.1| - 1.7 8.1 8.1 2.2 7.7 8.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 gi|300711929|ref|YP_003737743.1| - 1.7 8.9 18.9 0.88 9.8 5.2 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF1664 PF07889.12 gi|300711929|ref|YP_003737743.1| - 2 8.4 11.1 0.58 10.2 2.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 gi|300711929|ref|YP_003737743.1| - 2.6 8.6 10.6 1.4 9.4 1.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FapA PF03961.13 gi|300711929|ref|YP_003737743.1| - 3.9 6.0 10.0 6.9 5.2 10.0 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A Nup54 PF13874.6 gi|300711929|ref|YP_003737743.1| - 4.3 7.5 12.1 57 3.8 12.1 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Prominin PF05478.11 gi|300711929|ref|YP_003737743.1| - 5 4.9 7.1 6.9 4.5 7.1 1.1 1 0 0 1 1 1 0 Prominin LMBR1 PF04791.16 gi|300711929|ref|YP_003737743.1| - 5.1 5.9 6.5 6.5 5.5 6.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein PCRF PF03462.18 gi|300711929|ref|YP_003737743.1| - 5.3 6.9 16.3 11 5.8 16.3 1.5 1 1 0 1 1 1 0 PCRF domain DUF724 PF05266.14 gi|300711929|ref|YP_003737743.1| - 6.9 6.5 12.7 9.7 6.0 12.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) L_biotic_typeA PF04604.13 gi|300711929|ref|YP_003737743.1| - 7.4 6.5 6.8 1.6 8.7 0.3 2.6 3 0 0 3 3 2 0 Type-A lantibiotic DASH_Dam1 PF08653.10 gi|300711929|ref|YP_003737743.1| - 7.9 6.4 6.2 7.1 6.5 0.3 2.8 2 2 1 3 3 3 0 DASH complex subunit Dam1 DUF3450 PF11932.8 gi|300711929|ref|YP_003737743.1| - 8.2 5.7 22.2 4 6.7 6.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 gi|300711929|ref|YP_003737743.1| - 8.4 5.7 13.3 32 3.7 8.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4657 PF15552.6 gi|300711929|ref|YP_003737743.1| - 9.2 5.7 10.7 11 5.5 10.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4657) Fib_alpha PF08702.10 gi|300711929|ref|YP_003737743.1| - 9.6 6.4 13.6 52 4.0 13.7 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Pcc1 PF09341.10 gi|300711930|ref|YP_003737744.1| - 1.6e-10 40.9 0.7 1.9e-10 40.7 0.7 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 DNA_RNApol_7kD PF03604.13 gi|300711931|ref|YP_003737745.1| - 1.7e-10 40.4 6.8 2e-10 40.1 6.8 1.1 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 gi|300711931|ref|YP_003737745.1| - 6e-05 22.3 0.2 0.0044 16.4 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|300711931|ref|YP_003737745.1| - 0.00055 19.9 0.4 0.00057 19.9 0.4 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A2L_zn_ribbon PF08792.10 gi|300711931|ref|YP_003737745.1| - 0.00065 19.3 3.1 0.022 14.5 1.7 2.0 1 1 1 2 2 2 2 A2L zinc ribbon domain zf_UBZ PF18439.1 gi|300711931|ref|YP_003737745.1| - 0.00081 18.9 1.7 0.18 11.5 0.4 2.1 1 1 1 2 2 2 2 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS1595 PF12760.7 gi|300711931|ref|YP_003737745.1| - 0.003 17.5 4.3 0.072 13.1 0.1 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain zf-CHCC PF10276.9 gi|300711931|ref|YP_003737745.1| - 0.0035 17.4 0.5 0.0061 16.6 0.5 1.4 1 0 0 1 1 1 1 Zinc-finger domain YacG PF03884.14 gi|300711931|ref|YP_003737745.1| - 0.0065 16.2 0.2 0.33 10.7 0.0 2.0 2 0 0 2 2 2 1 DNA gyrase inhibitor YacG DZR PF12773.7 gi|300711931|ref|YP_003737745.1| - 0.0093 16.0 0.8 0.018 15.0 0.8 1.5 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|300711931|ref|YP_003737745.1| - 0.0094 15.6 2.3 0.17 11.6 0.3 2.1 2 0 0 2 2 2 1 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|300711931|ref|YP_003737745.1| - 0.011 16.1 0.6 0.067 13.6 0.0 1.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar RNHCP PF12647.7 gi|300711931|ref|YP_003737745.1| - 0.015 15.3 0.3 0.016 15.1 0.3 1.1 1 0 0 1 1 1 0 RNHCP domain Sgf11 PF08209.11 gi|300711931|ref|YP_003737745.1| - 0.025 14.1 1.9 1.4 8.5 0.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Anti-TRAP PF15777.5 gi|300711931|ref|YP_003737745.1| - 0.033 14.1 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Cys_rich_CPXG PF14255.6 gi|300711931|ref|YP_003737745.1| - 0.034 14.0 0.8 0.13 12.1 0.1 1.9 2 0 0 2 2 2 0 Cysteine-rich CPXCG zinc-ribbons_6 PF07191.12 gi|300711931|ref|YP_003737745.1| - 0.036 14.1 0.6 0.059 13.4 0.6 1.3 1 1 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|300711931|ref|YP_003737745.1| - 0.043 13.9 4.0 0.087 13.0 3.9 1.5 1 1 0 1 1 1 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|300711931|ref|YP_003737745.1| - 0.049 13.2 3.7 0.1 12.1 3.7 1.5 1 1 1 2 2 2 0 TFIIB zinc-binding DUF951 PF06107.11 gi|300711931|ref|YP_003737745.1| - 0.062 13.2 0.4 2.8 7.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) zf-Di19 PF05605.12 gi|300711931|ref|YP_003737745.1| - 0.066 13.5 0.2 0.51 10.7 0.0 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding OrfB_Zn_ribbon PF07282.11 gi|300711931|ref|YP_003737745.1| - 0.073 13.0 2.8 0.11 12.5 2.8 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DUF3268 PF11672.8 gi|300711931|ref|YP_003737745.1| - 0.11 12.9 1.0 0.39 11.1 0.1 1.9 1 1 1 2 2 2 0 zinc-finger-containing domain CpXC PF14353.6 gi|300711931|ref|YP_003737745.1| - 0.22 11.6 1.3 0.88 9.6 0.0 1.9 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_4 PF13717.6 gi|300711931|ref|YP_003737745.1| - 0.33 10.9 5.5 13 5.8 5.5 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Thioredoxin_4 PF13462.6 gi|300711931|ref|YP_003737745.1| - 0.62 10.2 1.7 0.83 9.8 0.0 1.8 1 1 1 2 2 2 0 Thioredoxin Ribosomal_L37ae PF01780.19 gi|300711932|ref|YP_003737746.1| - 2.2e-12 46.9 0.0 2.4e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family DUF5518 PF17647.1 gi|300711933|ref|YP_003737747.1| - 5.1e-16 58.9 11.8 6e-16 58.7 11.8 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5518) EptA_B_N PF08019.12 gi|300711933|ref|YP_003737747.1| - 0.039 13.8 1.2 0.071 13.0 1.2 1.4 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB DUF2103 PF09876.9 gi|300711934|ref|YP_003737748.1| - 2.8e-39 133.1 0.5 4.2e-39 132.5 0.2 1.5 2 0 0 2 2 2 1 Predicted metal-binding protein (DUF2103) acVLRF1 PF18859.1 gi|300711934|ref|YP_003737748.1| - 0.075 13.3 0.6 0.075 13.3 0.6 2.1 2 0 0 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor Aldo_ket_red PF00248.21 gi|300711935|ref|YP_003737749.1| - 6.2e-50 170.1 0.0 1.1e-37 129.8 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family POR PF01558.18 gi|300711935|ref|YP_003737749.1| - 0.019 15.0 0.0 0.22 11.5 0.0 2.2 1 1 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase TspO_MBR PF03073.15 gi|300711938|ref|YP_003737752.1| - 1.8e-42 144.6 22.5 2.2e-42 144.3 22.5 1.0 1 0 0 1 1 1 1 TspO/MBR family CcmF_C PF16327.5 gi|300711938|ref|YP_003737752.1| - 0.00024 20.5 7.9 0.00027 20.3 7.9 1.2 1 0 0 1 1 1 1 Cytochrome c-type biogenesis protein CcmF C-terminal SH PF01445.17 gi|300711938|ref|YP_003737752.1| - 0.099 12.6 1.4 0.21 11.6 1.4 1.6 1 0 0 1 1 1 0 Viral small hydrophobic protein DUF3810 PF12725.7 gi|300711938|ref|YP_003737752.1| - 9.6 5.4 10.8 2.1 7.6 7.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) TruD PF01142.18 gi|300711939|ref|YP_003737753.1| - 7.9e-162 538.8 0.0 9.1e-162 538.6 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) GATase_3 PF07685.14 gi|300711940|ref|YP_003737754.1| - 4.4e-35 121.1 0.0 5.7e-35 120.7 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|300711940|ref|YP_003737754.1| - 4.3e-10 39.7 0.0 7.4e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|300711940|ref|YP_003737754.1| - 5.5e-09 36.1 0.1 0.00042 20.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain SNO PF01174.19 gi|300711940|ref|YP_003737754.1| - 0.015 15.1 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 SNO glutamine amidotransferase family GATase PF00117.28 gi|300711940|ref|YP_003737754.1| - 0.15 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I PRK PF00485.18 gi|300711940|ref|YP_003737754.1| - 0.19 11.4 0.0 0.41 10.3 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NucS PF01939.16 gi|300711942|ref|YP_003737756.1| - 3.3e-60 203.3 0.0 3.7e-60 203.1 0.0 1.0 1 0 0 1 1 1 1 Endonuclease NucS YhcG_C PF06250.11 gi|300711942|ref|YP_003737756.1| - 0.0062 16.4 0.0 0.0099 15.7 0.0 1.2 1 0 0 1 1 1 1 YhcG PDDEXK nuclease domain DUF4556 PF15094.6 gi|300711942|ref|YP_003737756.1| - 0.019 14.2 0.0 0.028 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) MutS_V PF00488.21 gi|300711943|ref|YP_003737757.1| - 3.6e-79 265.2 0.6 5.9e-79 264.5 0.6 1.3 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 gi|300711943|ref|YP_003737757.1| - 5.3e-37 127.9 0.4 9.1e-37 127.1 0.4 1.4 1 0 0 1 1 1 1 MutS domain III MutS_I PF01624.20 gi|300711943|ref|YP_003737757.1| - 1.4e-35 121.9 0.0 2.4e-35 121.2 0.0 1.4 1 0 0 1 1 1 1 MutS domain I MutS_IV PF05190.18 gi|300711943|ref|YP_003737757.1| - 3.3e-31 107.5 0.3 7.3e-31 106.4 0.3 1.6 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|300711943|ref|YP_003737757.1| - 1e-13 51.8 0.0 2.4e-13 50.6 0.0 1.7 1 0 0 1 1 1 1 MutS domain II ORC_WH_C PF18137.1 gi|300711943|ref|YP_003737757.1| - 0.012 15.7 0.0 0.023 14.8 0.0 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal AAA_23 PF13476.6 gi|300711943|ref|YP_003737757.1| - 0.045 14.2 0.1 0.27 11.7 0.0 2.2 2 1 1 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|300711943|ref|YP_003737757.1| - 0.11 12.2 0.1 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 P-loop containing region of AAA domain CLIP1_ZNF PF16641.5 gi|300711943|ref|YP_003737757.1| - 0.18 11.7 1.5 0.33 10.9 1.5 1.4 1 0 0 1 1 1 0 CLIP1 zinc knuckle Thioredoxin PF00085.20 gi|300711944|ref|YP_003737758.1| - 1.1e-12 47.8 0.0 1.3e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|300711944|ref|YP_003737758.1| - 0.00013 22.4 0.0 0.0011 19.4 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 gi|300711944|ref|YP_003737758.1| - 0.00045 20.1 0.0 0.00085 19.2 0.0 1.4 1 1 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_3 PF13192.6 gi|300711944|ref|YP_003737758.1| - 0.0025 17.8 0.0 0.0032 17.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain HyaE PF07449.11 gi|300711944|ref|YP_003737758.1| - 0.018 15.0 0.0 0.031 14.3 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF836 PF05768.14 gi|300711944|ref|YP_003737758.1| - 0.046 14.1 0.0 0.06 13.8 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) OST3_OST6 PF04756.13 gi|300711944|ref|YP_003737758.1| - 0.056 12.8 0.0 0.084 12.2 0.0 1.3 1 1 0 1 1 1 0 OST3 / OST6 family, transporter family Sm_multidrug_ex PF06695.11 gi|300711945|ref|YP_003737759.1| - 2.8e-13 50.6 2.0 2.8e-13 50.6 2.0 1.7 2 0 0 2 2 2 1 Putative small multi-drug export protein DSBA PF01323.20 gi|300711946|ref|YP_003737760.1| - 6.6e-33 114.1 0.0 7.5e-33 113.9 0.0 1.0 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|300711946|ref|YP_003737760.1| - 5.1e-09 36.5 0.0 7.3e-07 29.5 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_5 PF13743.6 gi|300711946|ref|YP_003737760.1| - 0.0072 16.0 0.0 0.2 11.3 0.0 2.6 3 0 0 3 3 3 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|300711946|ref|YP_003737760.1| - 0.022 15.2 0.1 0.25 11.8 0.0 2.4 2 1 0 2 2 2 0 Thioredoxin-like domain V-ATPase_G_2 PF16999.5 gi|300711946|ref|YP_003737760.1| - 0.15 12.5 0.5 0.15 12.5 0.5 1.7 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit PTH2 PF01981.16 gi|300711947|ref|YP_003737761.1| - 6.7e-40 136.0 0.1 7.4e-40 135.9 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DCD PF06559.11 gi|300711948|ref|YP_003737762.1| - 1e-21 77.1 0.0 2.5e-11 43.0 0.0 2.1 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|300711948|ref|YP_003737762.1| - 1.8e-14 53.5 0.0 2.5e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 dUTPase ThiP_synth PF10120.9 gi|300711949|ref|YP_003737763.1| - 4.5e-52 176.0 0.1 8.4e-52 175.1 0.0 1.5 2 0 0 2 2 2 1 Thiamine-phosphate synthase HTH_3 PF01381.22 gi|300711949|ref|YP_003737763.1| - 2e-07 30.9 0.1 5.1e-07 29.7 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_37 PF13744.6 gi|300711949|ref|YP_003737763.1| - 2.3e-05 24.2 0.0 7.6e-05 22.6 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|300711949|ref|YP_003737763.1| - 0.00012 21.5 0.8 0.00029 20.3 0.0 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_31 PF13560.6 gi|300711949|ref|YP_003737763.1| - 0.00014 22.2 0.1 0.00051 20.3 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300711949|ref|YP_003737763.1| - 0.00028 20.7 0.0 0.0011 18.7 0.0 2.1 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|300711949|ref|YP_003737763.1| - 0.00038 20.2 0.1 0.0019 17.9 0.0 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_19 PF12844.7 gi|300711949|ref|YP_003737763.1| - 0.00052 20.0 0.0 0.0014 18.6 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|300711949|ref|YP_003737763.1| - 0.00069 19.1 0.1 0.0035 16.9 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|300711949|ref|YP_003737763.1| - 0.0013 19.1 0.0 0.0036 17.7 0.0 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain P22_Cro PF14549.6 gi|300711949|ref|YP_003737763.1| - 0.025 14.4 0.2 0.08 12.8 0.1 1.9 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro HTH_5 PF01022.20 gi|300711949|ref|YP_003737763.1| - 0.026 14.4 0.1 0.079 12.8 0.0 1.8 2 0 0 2 2 1 0 Bacterial regulatory protein, arsR family Sigma70_r4_2 PF08281.12 gi|300711949|ref|YP_003737763.1| - 0.027 14.1 0.1 0.078 12.7 0.1 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_28 PF13518.6 gi|300711949|ref|YP_003737763.1| - 0.034 14.3 0.1 1.4 9.1 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_17 PF12728.7 gi|300711949|ref|YP_003737763.1| - 0.043 14.0 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|300711949|ref|YP_003737763.1| - 0.047 13.6 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_1 PF00126.27 gi|300711949|ref|YP_003737763.1| - 0.048 13.6 0.2 0.83 9.7 0.0 2.9 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_38 PF13936.6 gi|300711949|ref|YP_003737763.1| - 0.05 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain RepB PF07506.11 gi|300711949|ref|YP_003737763.1| - 0.081 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 RepB plasmid partitioning protein HTH_35 PF13693.6 gi|300711949|ref|YP_003737763.1| - 0.095 12.8 0.2 0.79 9.8 0.0 2.5 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding MoCF_biosynth PF00994.24 gi|300711949|ref|YP_003737763.1| - 0.096 12.3 0.0 0.29 10.8 0.0 1.7 2 0 0 2 2 1 0 Probable molybdopterin binding domain HTH_Crp_2 PF13545.6 gi|300711949|ref|YP_003737763.1| - 0.11 12.5 0.4 0.45 10.5 0.1 2.2 2 0 0 2 2 1 0 Crp-like helix-turn-helix domain Cro PF09048.10 gi|300711949|ref|YP_003737763.1| - 0.17 11.9 0.0 0.42 10.7 0.0 1.7 1 0 0 1 1 1 0 Cro HTH_IclR PF09339.10 gi|300711949|ref|YP_003737763.1| - 0.17 11.7 4.2 0.59 10.0 0.1 3.0 3 0 0 3 3 3 0 IclR helix-turn-helix domain DUF1670 PF07900.11 gi|300711949|ref|YP_003737763.1| - 0.22 10.8 0.0 0.33 10.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) Methyltransf_31 PF13847.6 gi|300711950|ref|YP_003737764.1| - 2.7e-15 56.5 0.0 3.3e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300711950|ref|YP_003737764.1| - 5.3e-15 55.9 0.0 7.6e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300711950|ref|YP_003737764.1| - 1e-12 48.5 0.1 1.7e-12 47.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300711950|ref|YP_003737764.1| - 2.7e-11 44.1 0.0 3.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300711950|ref|YP_003737764.1| - 6.3e-11 42.1 0.0 7.5e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|300711950|ref|YP_003737764.1| - 2.6e-10 40.4 0.0 3.1e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|300711950|ref|YP_003737764.1| - 7.9e-10 38.8 0.1 1.1e-09 38.3 0.1 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|300711950|ref|YP_003737764.1| - 3.3e-07 29.9 0.0 4.7e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_2 PF00891.18 gi|300711950|ref|YP_003737764.1| - 4.2e-06 26.2 0.0 5.8e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 gi|300711950|ref|YP_003737764.1| - 0.0004 20.0 0.0 0.0006 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 gi|300711950|ref|YP_003737764.1| - 0.0016 18.6 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 gi|300711950|ref|YP_003737764.1| - 0.0036 17.0 0.0 0.005 16.5 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F GCD14 PF08704.10 gi|300711950|ref|YP_003737764.1| - 0.0054 16.4 0.0 0.0074 16.0 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit CMAS PF02353.20 gi|300711950|ref|YP_003737764.1| - 0.0054 16.1 0.0 0.0075 15.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|300711950|ref|YP_003737764.1| - 0.026 14.4 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CmcI PF04989.12 gi|300711950|ref|YP_003737764.1| - 0.13 11.9 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase 4HBT_2 PF13279.6 gi|300711951|ref|YP_003737765.1| - 6.9e-16 58.9 0.0 8.6e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|300711951|ref|YP_003737765.1| - 5.1e-13 48.9 0.0 2.3e-05 23.8 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase 4HBT PF03061.22 gi|300711951|ref|YP_003737765.1| - 8.7e-13 48.4 0.0 1.3e-12 47.9 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily DUF2892 PF11127.8 gi|300711952|ref|YP_003737766.1| - 0.17 12.0 1.6 0.17 11.9 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) Thi4 PF01946.17 gi|300711953|ref|YP_003737767.1| - 8.7e-60 201.9 0.3 4.3e-48 163.6 0.2 2.1 2 0 0 2 2 2 2 Thi4 family FAD_oxidored PF12831.7 gi|300711953|ref|YP_003737767.1| - 1e-11 44.9 0.3 2e-11 43.9 0.3 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300711953|ref|YP_003737767.1| - 8e-11 41.7 0.9 4e-08 32.8 0.3 2.2 1 1 1 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 gi|300711953|ref|YP_003737767.1| - 3.2e-10 39.8 0.1 6.2e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|300711953|ref|YP_003737767.1| - 5.2e-10 39.4 0.7 1.7e-05 24.6 0.2 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|300711953|ref|YP_003737767.1| - 1.6e-08 33.7 0.1 2.2e-08 33.2 0.1 1.2 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|300711953|ref|YP_003737767.1| - 1e-07 32.1 0.1 2.5e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|300711953|ref|YP_003737767.1| - 1.3e-07 31.1 0.0 2e-07 30.5 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|300711953|ref|YP_003737767.1| - 1.6e-05 24.0 0.1 0.015 14.2 0.1 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox PF00070.27 gi|300711953|ref|YP_003737767.1| - 4.9e-05 23.8 0.2 0.00013 22.5 0.2 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|300711953|ref|YP_003737767.1| - 8.3e-05 22.0 0.0 0.00015 21.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|300711953|ref|YP_003737767.1| - 0.00038 19.6 0.4 0.0091 15.1 0.2 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.22 gi|300711953|ref|YP_003737767.1| - 0.00058 19.1 0.2 0.00099 18.3 0.2 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|300711953|ref|YP_003737767.1| - 0.0006 19.8 0.3 0.0017 18.3 0.1 1.8 2 0 0 2 2 2 1 FAD-NAD(P)-binding Amino_oxidase PF01593.24 gi|300711953|ref|YP_003737767.1| - 0.00089 18.7 0.3 0.0033 16.8 0.0 2.0 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase Shikimate_DH PF01488.20 gi|300711953|ref|YP_003737767.1| - 0.001 19.1 0.0 0.068 13.2 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Glu_dehyd_C PF16912.5 gi|300711953|ref|YP_003737767.1| - 0.002 17.6 0.6 2.2 7.7 0.1 2.8 3 0 0 3 3 3 2 Glucose dehydrogenase C-terminus NAD_binding_7 PF13241.6 gi|300711953|ref|YP_003737767.1| - 0.006 17.0 0.0 0.012 16.1 0.0 1.6 1 1 0 1 1 1 1 Putative NAD(P)-binding RTP1_C2 PF10304.9 gi|300711953|ref|YP_003737767.1| - 0.082 12.6 1.8 0.15 11.7 0.0 2.2 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 2 TrkA_N PF02254.18 gi|300711953|ref|YP_003737767.1| - 0.13 12.5 0.4 0.28 11.4 0.1 1.8 2 0 0 2 2 2 0 TrkA-N domain Ribosomal_S2 PF00318.20 gi|300711953|ref|YP_003737767.1| - 0.14 11.4 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S2 SPO11_like PF03533.14 gi|300711954|ref|YP_003737768.1| - 0.24 11.5 2.0 2.8 8.1 0.3 2.6 2 0 0 2 2 2 0 SPO11 homologue Polysacc_synt_3 PF13440.6 gi|300711956|ref|YP_003737770.1| - 4.5e-31 108.2 13.5 9.6e-31 107.1 13.5 1.6 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|300711956|ref|YP_003737770.1| - 6e-28 98.0 20.1 6e-28 98.0 20.1 2.1 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|300711956|ref|YP_003737770.1| - 5.1e-15 55.8 13.6 5.1e-15 55.8 13.6 4.3 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain PPS_PS PF02006.16 gi|300711957|ref|YP_003737771.1| - 1.3e-72 243.0 0.3 1.6e-72 242.8 0.3 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase Phage_GPD PF05954.11 gi|300711957|ref|YP_003737771.1| - 0.026 13.8 0.1 0.039 13.2 0.1 1.3 1 0 0 1 1 1 0 Phage late control gene D protein (GPD) GAGA PF09237.11 gi|300711957|ref|YP_003737771.1| - 0.049 13.5 0.0 0.091 12.6 0.0 1.4 1 0 0 1 1 1 0 GAGA factor RTT107_BRCT_6 PF16771.5 gi|300711957|ref|YP_003737771.1| - 0.18 12.0 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain GHMP_kinases_N PF00288.26 gi|300711958|ref|YP_003737772.1| - 1.1e-10 41.6 1.3 2.4e-10 40.5 1.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|300711958|ref|YP_003737772.1| - 0.0015 18.9 0.8 0.01 16.2 0.1 2.6 3 0 0 3 3 3 1 GHMP kinases C terminal TMP_2 PF06791.13 gi|300711959|ref|YP_003737773.1| - 0.0036 17.0 0.0 0.0073 16.0 0.0 1.4 1 0 0 1 1 1 1 Prophage tail length tape measure protein tRNA-synt_2 PF00152.20 gi|300711961|ref|YP_003737775.1| - 2.9e-86 289.4 0.0 3.5e-86 289.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|300711961|ref|YP_003737775.1| - 8.1e-14 51.4 0.1 1.4e-13 50.6 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain GtrA PF04138.14 gi|300711962|ref|YP_003737776.1| - 3e-22 79.0 11.0 3.6e-22 78.8 11.0 1.1 1 0 0 1 1 1 1 GtrA-like protein DUF2715 PF10895.8 gi|300711962|ref|YP_003737776.1| - 0.065 12.9 1.7 0.086 12.5 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) Sulfatase PF00884.23 gi|300711963|ref|YP_003737777.1| - 2.8e-37 128.8 0.0 3.5e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|300711963|ref|YP_003737777.1| - 4.3e-11 43.0 0.0 3.9e-05 23.4 0.0 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 gi|300711963|ref|YP_003737777.1| - 0.027 13.5 0.0 0.049 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) HAT PF02184.16 gi|300711963|ref|YP_003737777.1| - 0.11 12.5 0.0 0.27 11.2 0.0 1.7 1 0 0 1 1 1 0 HAT (Half-A-TPR) repeat PcrB PF01884.17 gi|300711964|ref|YP_003737778.1| - 2.6e-56 190.6 0.7 3.1e-56 190.4 0.7 1.0 1 0 0 1 1 1 1 PcrB family DUF2237 PF09996.9 gi|300711965|ref|YP_003737779.1| - 1.2e-49 167.1 0.0 1.3e-49 167.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2237) Topoisom_bac PF01131.20 gi|300711966|ref|YP_003737780.1| - 1.3e-127 426.3 0.1 1.7e-127 425.9 0.1 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.19 gi|300711966|ref|YP_003737780.1| - 6.7e-18 64.2 18.1 1.8e-11 43.6 0.3 4.5 5 0 0 5 5 5 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.22 gi|300711966|ref|YP_003737780.1| - 1.8e-15 57.0 0.1 3.4e-15 56.1 0.1 1.5 1 0 0 1 1 1 1 Toprim domain HHH_5 PF14520.6 gi|300711966|ref|YP_003737780.1| - 3.2e-09 37.3 2.8 3.4e-09 37.1 0.4 2.4 3 0 0 3 3 3 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|300711966|ref|YP_003737780.1| - 9.4e-05 22.2 0.0 0.00037 20.3 0.0 2.0 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|300711966|ref|YP_003737780.1| - 0.0009 19.0 0.1 0.0026 17.6 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|300711966|ref|YP_003737780.1| - 0.0019 18.4 0.0 0.0057 16.9 0.0 1.9 1 0 0 1 1 1 1 Pathogenicity locus HEXIM PF15313.6 gi|300711966|ref|YP_003737780.1| - 0.0045 17.2 1.5 0.022 15.0 0.1 2.3 2 0 0 2 2 2 1 Hexamethylene bis-acetamide-inducible protein DUF4332 PF14229.6 gi|300711966|ref|YP_003737780.1| - 0.006 16.8 0.1 0.013 15.7 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) HHH_2 PF12826.7 gi|300711966|ref|YP_003737780.1| - 0.087 12.9 0.2 0.33 11.1 0.2 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif Toprim_2 PF13155.6 gi|300711966|ref|YP_003737780.1| - 0.14 12.6 0.3 5 7.6 0.0 2.7 2 0 0 2 2 2 0 Toprim-like Virul_fac_BrkB PF03631.15 gi|300711967|ref|YP_003737781.1| - 7.4e-39 133.9 39.0 8.3e-39 133.7 39.0 1.0 1 0 0 1 1 1 1 Virulence factor BrkB GatB_N PF02934.15 gi|300711971|ref|YP_003737785.1| - 2.9e-99 331.9 0.0 3.9e-99 331.5 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|300711971|ref|YP_003737785.1| - 2.8e-38 131.1 0.0 4.6e-38 130.4 0.0 1.3 1 0 0 1 1 1 1 GatB domain DUF2570 PF10828.8 gi|300711971|ref|YP_003737785.1| - 0.09 12.6 0.3 0.2 11.5 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) SlyX PF04102.12 gi|300711972|ref|YP_003737786.1| - 0.0087 16.7 4.5 0.012 16.3 4.5 1.4 1 1 0 1 1 1 1 SlyX Ax_dynein_light PF10211.9 gi|300711972|ref|YP_003737786.1| - 0.018 15.0 3.5 0.021 14.8 3.5 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain Spc7 PF08317.11 gi|300711972|ref|YP_003737786.1| - 0.02 13.8 3.3 0.023 13.6 3.3 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein XhlA PF10779.9 gi|300711972|ref|YP_003737786.1| - 0.11 12.7 0.3 0.11 12.7 0.3 1.6 1 1 1 2 2 2 0 Haemolysin XhlA Vac_Fusion PF02346.16 gi|300711972|ref|YP_003737786.1| - 0.13 12.0 1.7 0.21 11.3 1.7 1.4 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 Spc24 PF08286.11 gi|300711972|ref|YP_003737786.1| - 0.29 11.4 5.8 0.38 11.0 5.8 1.3 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 FlaC_arch PF05377.11 gi|300711972|ref|YP_003737786.1| - 0.57 10.6 5.9 0.18 12.2 1.4 1.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) PKcGMP_CC PF16808.5 gi|300711972|ref|YP_003737786.1| - 2.4 8.1 9.1 12 5.9 0.5 2.4 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SMC_N PF02463.19 gi|300711973|ref|YP_003737787.1| - 1.3e-55 188.2 34.0 7.5e-55 185.7 34.0 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|300711973|ref|YP_003737787.1| - 1.5e-28 99.4 0.0 3.7e-28 98.2 0.0 1.7 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 gi|300711973|ref|YP_003737787.1| - 7.4e-10 39.1 0.0 7.9e-07 29.2 0.0 4.9 4 1 1 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|300711973|ref|YP_003737787.1| - 3.4e-08 33.6 17.0 3.4e-08 33.6 17.0 5.7 2 2 1 3 3 3 1 AAA ATPase domain Spc7 PF08317.11 gi|300711973|ref|YP_003737787.1| - 3.3e-07 29.5 125.6 0.0022 16.9 16.6 7.9 2 2 6 8 8 8 6 Spc7 kinetochore protein AAA_13 PF13166.6 gi|300711973|ref|YP_003737787.1| - 2.4e-05 23.2 92.2 0.0021 16.8 14.6 5.7 2 2 3 5 5 5 3 AAA domain AAA_29 PF13555.6 gi|300711973|ref|YP_003737787.1| - 3.4e-05 23.5 0.0 7.3e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain UPF0242 PF06785.11 gi|300711973|ref|YP_003737787.1| - 0.00031 20.9 117.3 0.00081 19.6 18.9 6.6 3 2 3 6 6 6 2 Uncharacterised protein family (UPF0242) N-terminus DUF3584 PF12128.8 gi|300711973|ref|YP_003737787.1| - 0.00084 17.0 20.3 0.00084 17.0 20.3 4.4 2 2 1 4 4 4 2 Protein of unknown function (DUF3584) DUF724 PF05266.14 gi|300711973|ref|YP_003737787.1| - 0.0055 16.6 9.6 0.0055 16.6 9.6 7.9 4 2 4 8 8 8 4 Protein of unknown function (DUF724) AAA_23 PF13476.6 gi|300711973|ref|YP_003737787.1| - 0.009 16.5 129.5 8.8 6.8 68.6 7.8 2 2 0 2 2 1 0 AAA domain Baculo_PEP_C PF04513.12 gi|300711973|ref|YP_003737787.1| - 0.035 14.1 18.2 1.8 8.6 0.1 6.9 5 1 2 7 7 7 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 gi|300711973|ref|YP_003737787.1| - 0.054 13.5 62.4 1.1 9.3 5.6 9.6 4 2 7 11 11 11 0 Protein of unknown function (DUF1664) CENP-F_leu_zip PF10473.9 gi|300711973|ref|YP_003737787.1| - 0.068 13.2 144.0 0.045 13.8 11.2 7.7 2 2 5 7 7 7 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NPV_P10 PF05531.12 gi|300711973|ref|YP_003737787.1| - 0.12 12.9 31.6 0.58 10.7 0.3 8.6 5 2 4 9 9 8 0 Nucleopolyhedrovirus P10 protein FliJ PF02050.16 gi|300711973|ref|YP_003737787.1| - 0.12 12.6 89.0 0.13 12.5 3.1 7.9 4 2 4 8 8 8 0 Flagellar FliJ protein Fib_alpha PF08702.10 gi|300711973|ref|YP_003737787.1| - 0.27 11.4 51.4 0.1 12.8 3.6 6.7 2 2 3 6 6 6 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 gi|300711973|ref|YP_003737787.1| - 0.44 11.3 21.2 32 5.3 0.2 7.5 5 2 1 6 6 6 0 Flagellar hook-associated protein 2 N-terminus Exonuc_VII_L PF02601.15 gi|300711973|ref|YP_003737787.1| - 0.77 9.3 62.3 0.026 14.1 6.6 5.3 2 2 1 3 3 2 0 Exonuclease VII, large subunit Atg14 PF10186.9 gi|300711973|ref|YP_003737787.1| - 1.9 7.5 89.5 0.48 9.5 12.8 5.7 2 2 2 5 5 5 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 gi|300711973|ref|YP_003737787.1| - 2.2 7.6 99.2 0.33 10.2 4.0 6.4 2 2 4 6 6 6 0 Domain of unknown function (DUF4407) ATG16 PF08614.11 gi|300711973|ref|YP_003737787.1| - 2.6 8.2 132.5 0.072 13.3 16.9 8.4 3 2 6 9 9 8 0 Autophagy protein 16 (ATG16) DUF745 PF05335.13 gi|300711973|ref|YP_003737787.1| - 8.1 6.1 67.2 0.15 11.8 5.8 6.2 3 2 3 6 6 6 0 Protein of unknown function (DUF745) SMC_ScpA PF02616.14 gi|300711974|ref|YP_003737788.1| - 6.8e-16 58.9 0.1 1.9e-11 44.3 0.1 2.2 2 0 0 2 2 2 2 Segregation and condensation protein ScpA DUF2235 PF09994.9 gi|300711974|ref|YP_003737788.1| - 0.11 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized alpha/beta hydrolase domain (DUF2235) Autophagy_N PF03986.13 gi|300711975|ref|YP_003737789.1| - 0.1 12.5 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Autophagocytosis associated protein (Atg3), N-terminal domain DoxX PF07681.12 gi|300711976|ref|YP_003737790.1| - 7.1e-21 74.6 17.5 1.2e-20 73.8 17.5 1.4 1 0 0 1 1 1 1 DoxX DoxX_2 PF13564.6 gi|300711976|ref|YP_003737790.1| - 2.3e-05 24.4 17.0 3.6e-05 23.8 17.0 1.4 1 1 0 1 1 1 1 DoxX-like family DoxD PF04173.13 gi|300711976|ref|YP_003737790.1| - 6.7e-05 22.9 7.3 0.0028 17.6 7.3 2.0 1 1 0 1 1 1 1 TQO small subunit DoxD Phage_holin_3_5 PF16085.5 gi|300711976|ref|YP_003737790.1| - 0.15 12.2 2.2 0.3 11.2 2.0 1.7 1 1 0 1 1 1 0 Bacteriophage holin Hol, superfamily III PNP_UDP_1 PF01048.20 gi|300711977|ref|YP_003737791.1| - 6.4e-45 153.2 0.1 7.4e-45 153.0 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily dCMP_cyt_deam_1 PF00383.23 gi|300711978|ref|YP_003737792.1| - 7.1e-16 57.9 0.0 9.6e-16 57.5 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|300711978|ref|YP_003737792.1| - 1.2e-15 57.5 0.0 1.6e-15 57.1 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 gi|300711978|ref|YP_003737792.1| - 0.00035 20.7 0.0 0.00056 20.0 0.0 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 NAD2 PF18782.1 gi|300711978|ref|YP_003737792.1| - 0.0022 18.2 0.0 0.0033 17.6 0.0 1.2 1 0 0 1 1 1 1 Novel AID APOBEC clade 2 APOBEC2 PF18772.1 gi|300711978|ref|YP_003737792.1| - 0.0056 16.7 0.0 0.0083 16.2 0.0 1.2 1 0 0 1 1 1 1 APOBEC2 NAD1 PF18778.1 gi|300711978|ref|YP_003737792.1| - 0.0081 16.3 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 Bd3614-deam PF14439.6 gi|300711978|ref|YP_003737792.1| - 0.016 15.3 0.0 0.036 14.1 0.0 1.6 1 0 0 1 1 1 0 Bd3614-like deaminase APOBEC_N PF08210.11 gi|300711978|ref|YP_003737792.1| - 0.016 15.1 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain MatE PF01554.18 gi|300711979|ref|YP_003737793.1| - 1e-63 213.8 30.4 8.2e-32 110.1 12.2 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|300711979|ref|YP_003737793.1| - 9.3e-14 51.7 20.6 1.5e-11 44.6 6.8 4.2 4 2 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|300711979|ref|YP_003737793.1| - 1.8e-08 33.5 24.0 3.7e-05 22.5 1.2 4.2 2 2 2 4 4 4 3 Lipid II flippase MurJ DUF4191 PF13829.6 gi|300711979|ref|YP_003737793.1| - 0.22 10.8 3.2 0.86 8.9 3.2 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) MIG-14_Wnt-bd PF06664.12 gi|300711979|ref|YP_003737793.1| - 3.1 6.9 7.6 1.9 7.7 0.9 2.5 2 1 0 2 2 2 0 Wnt-binding factor required for Wnt secretion Pribosyltran PF00156.27 gi|300711980|ref|YP_003737794.1| - 5.1e-16 58.6 0.0 7.1e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|300711980|ref|YP_003737794.1| - 0.0028 17.1 0.0 0.0039 16.7 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase DUF4013 PF13197.6 gi|300711981|ref|YP_003737795.1| - 8.4e-06 25.7 15.4 8.4e-06 25.7 15.4 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF4013) Arteri_Gl PF00951.18 gi|300711981|ref|YP_003737795.1| - 8.6 6.1 20.6 0.083 12.7 5.9 2.6 3 0 0 3 3 3 0 Arterivirus GL envelope glycoprotein PhzC-PhzF PF02567.16 gi|300711982|ref|YP_003737796.1| - 1.7e-64 218.0 0.0 2e-64 217.8 0.0 1.0 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein Pro_racemase PF05544.11 gi|300711982|ref|YP_003737796.1| - 0.002 17.3 0.0 0.0027 16.8 0.0 1.2 1 0 0 1 1 1 1 Proline racemase DAP_epimerase PF01678.19 gi|300711982|ref|YP_003737796.1| - 0.061 13.5 0.1 0.34 11.1 0.0 2.1 2 0 0 2 2 2 0 Diaminopimelate epimerase PPDK_N PF01326.19 gi|300711983|ref|YP_003737797.1| - 6.8e-110 367.4 0.0 1e-109 366.8 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|300711983|ref|YP_003737797.1| - 2.2e-83 279.8 0.0 3.4e-83 279.1 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|300711983|ref|YP_003737797.1| - 3.7e-29 100.2 3.0 8.3e-29 99.1 3.0 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 gi|300711983|ref|YP_003737797.1| - 0.02 14.0 0.0 0.042 13.0 0.0 1.5 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family UBM PF14377.6 gi|300711983|ref|YP_003737797.1| - 0.053 13.0 0.1 0.16 11.5 0.1 1.8 1 0 0 1 1 1 0 Ubiquitin binding region Epimerase_2 PF02350.19 gi|300711983|ref|YP_003737797.1| - 0.058 12.2 0.1 0.14 11.0 0.1 1.6 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Pyridoxal_deC PF00282.19 gi|300711984|ref|YP_003737798.1| - 2.4e-30 105.5 0.0 3.3e-30 105.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|300711984|ref|YP_003737798.1| - 1.2e-08 34.4 0.0 1.6e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|300711984|ref|YP_003737798.1| - 1.4e-07 31.1 0.0 3e-07 30.0 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase PrpR_N PF06506.11 gi|300711984|ref|YP_003737798.1| - 0.095 12.3 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Propionate catabolism activator Usp PF00582.26 gi|300711985|ref|YP_003737799.1| - 1.2e-12 48.6 1.0 1.4e-11 45.0 1.0 1.9 1 1 0 1 1 1 1 Universal stress protein family tRNA-synt_1g PF09334.11 gi|300711986|ref|YP_003737800.1| - 3.9e-143 476.9 0.0 4.9e-143 476.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|300711986|ref|YP_003737800.1| - 2.4e-20 72.4 0.0 4e-20 71.7 0.0 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|300711986|ref|YP_003737800.1| - 3.7e-15 55.2 0.0 1.3e-11 43.5 0.0 3.3 3 1 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|300711986|ref|YP_003737800.1| - 1.2e-12 48.0 0.1 1.9e-12 47.4 0.1 1.2 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|300711986|ref|YP_003737800.1| - 8.5e-11 41.7 0.0 1.7e-06 27.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|300711986|ref|YP_003737800.1| - 0.032 13.2 0.0 0.22 10.4 0.0 2.2 2 1 0 2 2 2 0 tRNA synthetases class I (K) DUF2423 PF10338.9 gi|300711986|ref|YP_003737800.1| - 0.05 13.8 0.6 0.1 12.8 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) OST-HTH PF12872.7 gi|300711986|ref|YP_003737800.1| - 0.18 11.6 0.0 14 5.5 0.0 2.5 2 0 0 2 2 2 0 OST-HTH/LOTUS domain tRNA-synt_1d PF00750.19 gi|300711986|ref|YP_003737800.1| - 0.2 10.5 0.0 0.52 9.2 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (R) EamA PF00892.20 gi|300711987|ref|YP_003737801.1| - 2.4e-14 53.6 17.9 2.7e-14 53.5 17.9 1.0 1 0 0 1 1 1 1 EamA-like transporter family PK PF00224.21 gi|300711988|ref|YP_003737802.1| - 4.8e-112 374.3 1.1 7e-112 373.8 1.1 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|300711988|ref|YP_003737802.1| - 2e-32 111.8 0.1 3.9e-32 110.9 0.1 1.5 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain PEP-utilizers PF00391.23 gi|300711988|ref|YP_003737802.1| - 1.2e-11 44.2 2.7 2.2e-11 43.3 0.3 2.7 3 0 0 3 3 3 1 PEP-utilising enzyme, mobile domain LpxI_C PF06230.11 gi|300711988|ref|YP_003737802.1| - 0.05 13.5 4.0 1.4 8.8 0.1 3.6 4 1 0 4 4 4 0 LpxI C-terminal domain NfeD PF01957.18 gi|300711990|ref|YP_003737804.1| - 4.7e-07 30.1 1.0 7.2e-07 29.5 0.1 1.8 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding Bax1-I PF01027.20 gi|300711990|ref|YP_003737804.1| - 0.5 10.2 7.7 0.63 9.8 7.7 1.1 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF308 PF03729.13 gi|300711990|ref|YP_003737804.1| - 6.9 7.1 19.7 0.39 11.1 10.9 2.1 1 1 1 2 2 2 0 Short repeat of unknown function (DUF308) ABC_export PF16962.5 gi|300711990|ref|YP_003737804.1| - 7.1 5.0 6.9 9.8 4.5 6.9 1.1 1 0 0 1 1 1 0 Putative ABC exporter Band_7 PF01145.25 gi|300711991|ref|YP_003737805.1| - 1.3e-39 136.0 2.6 4.4e-39 134.3 2.6 1.8 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|300711991|ref|YP_003737805.1| - 0.00029 20.6 0.2 0.00071 19.3 0.2 1.7 1 0 0 1 1 1 1 SPFH domain-Band 7 family MarR_2 PF12802.7 gi|300711992|ref|YP_003737806.1| - 3.2e-11 42.9 0.9 7.9e-09 35.3 0.2 2.5 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|300711992|ref|YP_003737806.1| - 1.5e-10 41.0 0.6 1.4e-05 25.1 0.2 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain MarR PF01047.22 gi|300711992|ref|YP_003737806.1| - 1.5e-07 31.2 0.0 9.9e-06 25.4 0.0 2.5 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|300711992|ref|YP_003737806.1| - 5.8e-07 29.3 0.0 0.00048 20.0 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|300711992|ref|YP_003737806.1| - 7.6e-07 29.0 0.0 1.3e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|300711992|ref|YP_003737806.1| - 1.3e-06 27.8 0.0 0.00027 20.5 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|300711992|ref|YP_003737806.1| - 1.8e-06 27.7 0.0 0.035 14.0 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|300711992|ref|YP_003737806.1| - 2.2e-06 27.7 0.0 0.062 13.5 0.0 2.2 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|300711992|ref|YP_003737806.1| - 7.3e-05 22.7 0.2 0.00039 20.4 0.1 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain DUF4423 PF14394.6 gi|300711992|ref|YP_003737806.1| - 0.00011 21.9 0.0 0.2 11.4 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4423) RP-C PF03428.13 gi|300711992|ref|YP_003737806.1| - 0.00023 20.9 0.2 0.25 11.0 0.0 2.2 2 0 0 2 2 2 2 Replication protein C N-terminal domain Fe_dep_repress PF01325.19 gi|300711992|ref|YP_003737806.1| - 0.00045 20.4 0.0 0.00095 19.3 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|300711992|ref|YP_003737806.1| - 0.0048 17.4 0.1 0.027 14.9 0.0 2.3 2 0 0 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|300711992|ref|YP_003737806.1| - 0.0049 17.2 0.1 0.034 14.5 0.0 2.3 2 1 1 3 3 3 1 Transcriptional regulator RepL PF05732.11 gi|300711992|ref|YP_003737806.1| - 0.0051 16.3 0.0 0.0077 15.7 0.0 1.2 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_29 PF13551.6 gi|300711992|ref|YP_003737806.1| - 0.0051 16.8 0.1 0.067 13.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn helix HTH_DeoR PF08220.12 gi|300711992|ref|YP_003737806.1| - 0.006 16.3 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|300711992|ref|YP_003737806.1| - 0.006 16.4 2.4 0.024 14.4 0.8 2.5 2 1 0 2 2 2 1 IclR helix-turn-helix domain DUF2250 PF10007.9 gi|300711992|ref|YP_003737806.1| - 0.0069 16.5 0.0 0.052 13.7 0.0 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) GntR PF00392.21 gi|300711992|ref|YP_003737806.1| - 0.0078 15.8 0.2 0.043 13.5 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_CodY PF08222.11 gi|300711992|ref|YP_003737806.1| - 0.017 14.7 0.0 4 7.1 0.0 2.3 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|300711992|ref|YP_003737806.1| - 0.017 14.9 0.1 0.044 13.6 0.1 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF4995 PF16386.5 gi|300711992|ref|YP_003737806.1| - 0.032 14.2 0.0 0.064 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function HTH_23 PF13384.6 gi|300711992|ref|YP_003737806.1| - 0.041 13.7 0.0 0.11 12.3 0.0 1.7 2 0 0 2 2 1 0 Homeodomain-like domain DprA_WH PF17782.1 gi|300711992|ref|YP_003737806.1| - 0.058 13.5 0.6 0.23 11.6 0.3 2.0 2 0 0 2 2 2 0 DprA winged helix domain Osmo_MPGsynth PF09488.10 gi|300711992|ref|YP_003737806.1| - 0.11 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) HTH_7 PF02796.15 gi|300711992|ref|YP_003737806.1| - 0.12 12.5 0.1 0.81 9.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_36 PF13730.6 gi|300711992|ref|YP_003737806.1| - 0.13 12.2 0.0 0.45 10.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Metallophos PF00149.28 gi|300711993|ref|YP_003737807.1| - 6.1e-14 53.0 0.0 8.2e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|300711993|ref|YP_003737807.1| - 2.3e-12 47.4 0.0 6.8e-12 45.9 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PGA_cap PF09587.10 gi|300711993|ref|YP_003737807.1| - 0.066 12.7 0.9 0.14 11.6 0.9 1.7 1 1 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap LexA_DNA_bind PF01726.16 gi|300711994|ref|YP_003737808.1| - 0.01 15.6 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain NTPase_I-T PF01931.18 gi|300711995|ref|YP_003737809.1| - 2.1e-40 138.2 0.0 2.8e-40 137.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF84 TFIIB PF00382.19 gi|300711996|ref|YP_003737810.1| - 2.4e-39 133.2 0.7 1.4e-19 69.9 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|300711996|ref|YP_003737810.1| - 2.2e-15 55.9 1.2 4.9e-15 54.8 1.2 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_C PF02984.19 gi|300711996|ref|YP_003737810.1| - 0.051 13.7 0.0 2.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain Birna_VP3 PF01767.16 gi|300711996|ref|YP_003737810.1| - 0.06 13.4 0.5 0.95 9.5 0.0 2.6 2 1 0 2 2 2 0 Birnavirus VP3 protein A2L_zn_ribbon PF08792.10 gi|300711996|ref|YP_003737810.1| - 0.11 12.2 1.8 0.34 10.7 1.8 1.8 1 1 0 1 1 1 0 A2L zinc ribbon domain DZR PF12773.7 gi|300711996|ref|YP_003737810.1| - 0.17 11.9 0.7 0.32 11.1 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon Auto_anti-p27 PF06677.12 gi|300711996|ref|YP_003737810.1| - 0.2 11.8 0.8 0.35 11.0 0.8 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HTH_Tnp_ISL3 PF13542.6 gi|300711996|ref|YP_003737810.1| - 0.23 10.9 1.8 0.29 10.6 0.2 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4 PF04545.16 gi|300711996|ref|YP_003737810.1| - 0.31 10.6 0.0 0.31 10.6 0.0 3.9 5 0 0 5 5 5 0 Sigma-70, region 4 TrmB PF01978.19 gi|300711996|ref|YP_003737810.1| - 1.7 8.6 4.4 7.2 6.6 0.2 2.7 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB zf-ribbon_3 PF13248.6 gi|300711996|ref|YP_003737810.1| - 1.8 8.1 3.6 6.8 6.2 3.6 1.9 1 1 0 1 1 1 0 zinc-ribbon domain DHquinase_I PF01487.15 gi|300711997|ref|YP_003737811.1| - 3.2e-41 142.1 0.0 3.7e-41 141.9 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase Autoind_bind PF03472.15 gi|300711997|ref|YP_003737811.1| - 0.056 12.9 0.1 0.13 11.7 0.1 1.6 1 0 0 1 1 1 0 Autoinducer binding domain Semialdhyde_dh PF01118.24 gi|300711997|ref|YP_003737811.1| - 0.11 12.9 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Pro_CA PF00484.19 gi|300711998|ref|YP_003737812.1| - 1.9e-24 86.7 0.0 2.6e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase PHP_C PF13263.6 gi|300711999|ref|YP_003737813.1| - 2.7e-20 71.9 0.7 1.8e-19 69.2 0.5 2.2 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|300711999|ref|YP_003737813.1| - 0.00011 22.6 0.0 0.00012 22.5 0.0 1.2 1 0 0 1 1 1 1 PHP domain DUF4186 PF13811.6 gi|300711999|ref|YP_003737813.1| - 0.058 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) CorA PF01544.18 gi|300712000|ref|YP_003737814.1| - 4.3e-66 223.2 0.0 4.9e-66 223.0 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein MscS_TM PF12794.7 gi|300712000|ref|YP_003737814.1| - 0.03 13.2 0.2 0.045 12.6 0.2 1.2 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Me-amine-dh_H PF06433.11 gi|300712000|ref|YP_003737814.1| - 0.079 11.8 0.2 0.76 8.6 0.0 2.0 2 0 0 2 2 2 0 Methylamine dehydrogenase heavy chain (MADH) SNARE_assoc PF09335.11 gi|300712002|ref|YP_003737816.1| - 1.1e-06 29.1 6.3 2.8e-06 27.8 6.3 1.8 1 1 0 1 1 1 1 SNARE associated Golgi protein Glycos_transf_2 PF00535.26 gi|300712003|ref|YP_003737817.1| - 4.3e-18 65.7 0.0 5.3e-18 65.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300712003|ref|YP_003737817.1| - 9.8e-10 38.7 0.0 1.1e-09 38.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|300712003|ref|YP_003737817.1| - 0.0031 17.0 0.0 0.0045 16.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|300712003|ref|YP_003737817.1| - 0.0038 16.7 0.0 0.0079 15.7 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 21 dUTPase PF00692.19 gi|300712004|ref|YP_003737818.1| - 1.9e-15 56.7 0.0 2.6e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|300712004|ref|YP_003737818.1| - 0.0093 14.8 0.0 0.015 14.1 0.0 1.4 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Aconitase PF00330.20 gi|300712005|ref|YP_003737819.1| - 8.1e-107 358.1 0.1 4.9e-105 352.2 0.1 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|300712005|ref|YP_003737819.1| - 8.8e-20 71.4 0.0 1.6e-19 70.5 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain DUF521 PF04412.13 gi|300712005|ref|YP_003737819.1| - 0.00045 19.0 0.0 0.00069 18.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Barwin PF00967.17 gi|300712005|ref|YP_003737819.1| - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Barwin family IU_nuc_hydro PF01156.19 gi|300712006|ref|YP_003737820.1| - 4e-71 240.1 0.0 4.6e-71 239.9 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase BPD_transp_2 PF02653.16 gi|300712007|ref|YP_003737821.1| - 3.1e-30 105.2 30.7 5.1e-30 104.5 30.7 1.3 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|300712008|ref|YP_003737822.1| - 4.3e-41 140.8 34.9 4.3e-41 140.8 34.9 1.9 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3169 PF11368.8 gi|300712008|ref|YP_003737822.1| - 1.8 8.0 9.6 1.8 8.0 1.3 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF3169) DUF2270 PF10028.9 gi|300712008|ref|YP_003737822.1| - 2.3 7.7 4.4 9.4 5.8 1.0 2.4 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2270) ABC_tran PF00005.27 gi|300712009|ref|YP_003737823.1| - 3.8e-47 160.2 0.0 2.8e-31 108.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|300712009|ref|YP_003737823.1| - 1.6e-08 34.7 0.0 0.0032 17.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|300712009|ref|YP_003737823.1| - 0.00057 19.6 0.1 0.012 15.4 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain Bac_DnaA PF00308.18 gi|300712009|ref|YP_003737823.1| - 0.0018 18.2 0.9 0.0037 17.1 0.0 1.9 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_15 PF13175.6 gi|300712009|ref|YP_003737823.1| - 0.0036 17.0 0.0 0.065 12.9 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|300712009|ref|YP_003737823.1| - 0.0041 17.6 0.0 0.0088 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|300712009|ref|YP_003737823.1| - 0.018 14.7 1.1 0.033 13.9 0.2 2.0 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|300712009|ref|YP_003737823.1| - 0.019 14.9 0.0 0.049 13.5 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|300712009|ref|YP_003737823.1| - 0.041 14.3 0.0 0.14 12.6 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|300712009|ref|YP_003737823.1| - 0.045 13.3 0.0 0.097 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|300712009|ref|YP_003737823.1| - 0.056 13.5 0.1 0.31 11.1 0.0 2.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase SMC_N PF02463.19 gi|300712009|ref|YP_003737823.1| - 0.11 11.9 0.1 1.8 8.0 0.0 2.6 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|300712009|ref|YP_003737823.1| - 0.14 12.4 0.2 0.46 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain Bmp PF02608.14 gi|300712010|ref|YP_003737824.1| - 1.5e-56 191.6 5.0 2.3e-56 191.0 5.0 1.3 1 1 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like Peripla_BP_4 PF13407.6 gi|300712010|ref|YP_003737824.1| - 0.00012 21.8 5.8 0.00012 21.8 5.8 1.8 1 1 0 2 2 2 1 Periplasmic binding protein domain Acetyltransf_1 PF00583.25 gi|300712011|ref|YP_003737825.1| - 9.7e-18 64.5 0.0 1.2e-17 64.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300712011|ref|YP_003737825.1| - 5.7e-13 49.1 0.0 8.2e-13 48.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300712011|ref|YP_003737825.1| - 1.3e-10 41.3 0.0 1.6e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|300712011|ref|YP_003737825.1| - 8.6e-08 32.3 0.0 1.4e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300712011|ref|YP_003737825.1| - 1.4e-05 24.9 0.0 2.9e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|300712011|ref|YP_003737825.1| - 0.0018 18.9 0.0 0.0021 18.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300712011|ref|YP_003737825.1| - 0.0092 16.1 0.0 0.018 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 gi|300712011|ref|YP_003737825.1| - 0.017 14.8 0.0 0.027 14.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF1999 PF09390.10 gi|300712011|ref|YP_003737825.1| - 0.038 13.6 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) zf-C2H2_9 PF16293.5 gi|300712012|ref|YP_003737826.1| - 0.00026 20.8 0.0 0.00041 20.2 0.0 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (1 copy) zf-met PF12874.7 gi|300712012|ref|YP_003737826.1| - 0.17 12.3 0.0 0.27 11.7 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type NUDIX PF00293.28 gi|300712014|ref|YP_003737828.1| - 2.1e-13 50.5 2.0 2.9e-13 50.0 2.0 1.2 1 0 0 1 1 1 1 NUDIX domain Rhodanese PF00581.20 gi|300712015|ref|YP_003737829.1| - 6.7e-14 52.3 0.0 8e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain SUI1 PF01253.22 gi|300712016|ref|YP_003737830.1| - 3.6e-22 78.7 0.0 4.5e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|300712016|ref|YP_003737830.1| - 0.006 16.3 0.6 0.0074 16.0 0.6 1.1 1 0 0 1 1 1 1 DTW domain Img2 PF05046.14 gi|300712016|ref|YP_003737830.1| - 0.013 15.8 0.0 0.02 15.2 0.0 1.5 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Bac_luciferase PF00296.20 gi|300712018|ref|YP_003737832.1| - 9.3e-63 212.5 8.0 1.2e-62 212.2 8.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase ArsB PF02040.15 gi|300712018|ref|YP_003737832.1| - 0.0068 15.8 0.0 0.0098 15.3 0.0 1.1 1 0 0 1 1 1 1 Arsenical pump membrane protein F420_ligase PF01996.16 gi|300712019|ref|YP_003737833.1| - 5.3e-53 179.9 0.0 6.3e-53 179.6 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Polysacc_deac_1 PF01522.21 gi|300712020|ref|YP_003737834.1| - 4.4e-15 55.7 0.0 7.9e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase IF-2B PF01008.17 gi|300712021|ref|YP_003737835.1| - 3.8e-46 157.6 1.2 5.9e-46 156.9 1.2 1.3 1 0 0 1 1 1 1 Initiation factor 2 subunit family RibD_C PF01872.17 gi|300712021|ref|YP_003737835.1| - 0.067 13.0 0.2 0.18 11.6 0.1 1.5 1 1 0 1 1 1 0 RibD C-terminal domain 2-Hacid_dh_C PF02826.19 gi|300712022|ref|YP_003737836.1| - 1e-52 178.1 0.0 1.4e-52 177.6 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300712022|ref|YP_003737836.1| - 1.3e-08 34.6 0.0 1.7e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|300712022|ref|YP_003737836.1| - 3.9e-05 23.9 0.1 6.7e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|300712022|ref|YP_003737836.1| - 0.0037 17.2 0.2 0.0071 16.3 0.2 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300712022|ref|YP_003737836.1| - 0.011 16.2 0.4 0.28 11.8 0.1 2.2 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|300712022|ref|YP_003737836.1| - 0.014 15.6 0.3 0.27 11.5 0.1 2.5 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_7 PF13241.6 gi|300712022|ref|YP_003737836.1| - 0.07 13.6 0.1 0.27 11.7 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding XdhC_C PF13478.6 gi|300712022|ref|YP_003737836.1| - 0.091 13.3 0.1 1.9 9.0 0.1 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain AdoHcyase_NAD PF00670.21 gi|300712022|ref|YP_003737836.1| - 0.15 12.1 0.1 0.35 10.9 0.1 1.6 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MMR_HSR1 PF01926.23 gi|300712024|ref|YP_003737838.1| - 7.4e-20 71.1 0.0 1.4e-19 70.2 0.0 1.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|300712024|ref|YP_003737838.1| - 1.2e-12 47.7 0.1 1.8e-11 43.8 0.1 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|300712024|ref|YP_003737838.1| - 1e-05 25.2 0.1 0.0008 19.0 0.0 2.5 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|300712024|ref|YP_003737838.1| - 0.0007 19.5 0.0 0.16 11.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase TIP49 PF06068.13 gi|300712024|ref|YP_003737838.1| - 0.0012 18.1 0.6 0.0021 17.3 0.6 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain Roc PF08477.13 gi|300712024|ref|YP_003737838.1| - 0.0016 18.7 0.0 0.0054 16.9 0.0 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MeaB PF03308.16 gi|300712024|ref|YP_003737838.1| - 0.0036 16.3 0.3 0.96 8.4 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Ras PF00071.22 gi|300712024|ref|YP_003737838.1| - 0.0042 16.7 0.0 0.011 15.4 0.0 1.7 2 0 0 2 2 2 1 Ras family AAA_22 PF13401.6 gi|300712024|ref|YP_003737838.1| - 0.0047 17.2 0.0 0.37 11.0 0.0 2.7 1 1 1 2 2 2 1 AAA domain Dynamin_N PF00350.23 gi|300712024|ref|YP_003737838.1| - 0.012 15.6 0.1 0.14 12.2 0.1 2.1 1 1 1 2 2 2 0 Dynamin family ATP_bind_1 PF03029.17 gi|300712024|ref|YP_003737838.1| - 0.013 15.3 2.3 0.8 9.4 0.1 2.4 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|300712024|ref|YP_003737838.1| - 0.016 15.7 0.0 0.027 15.0 0.0 1.7 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 gi|300712024|ref|YP_003737838.1| - 0.081 12.3 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein DUF389 PF04087.14 gi|300712025|ref|YP_003737839.1| - 8.5e-32 110.1 21.8 8.8e-31 106.9 17.2 2.9 3 0 0 3 3 3 2 Domain of unknown function (DUF389) DUF1189 PF06691.11 gi|300712025|ref|YP_003737839.1| - 0.021 14.4 0.0 0.2 11.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) DUF2254 PF10011.9 gi|300712026|ref|YP_003737840.1| - 0.12 11.2 0.4 0.2 10.4 0.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) ApoLp-III PF07464.11 gi|300712026|ref|YP_003737840.1| - 0.22 11.6 0.4 0.5 10.5 0.5 1.5 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF389 PF04087.14 gi|300712027|ref|YP_003737841.1| - 6e-22 78.2 26.3 6.5e-22 78.1 23.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF389) NOG1_N PF17835.1 gi|300712028|ref|YP_003737842.1| - 1.1e-42 145.8 0.0 1.5e-42 145.3 0.0 1.2 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|300712028|ref|YP_003737842.1| - 2.8e-22 78.3 0.0 8.3e-22 76.7 0.0 1.8 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|300712028|ref|YP_003737842.1| - 4.4e-19 68.7 0.0 8.4e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|300712028|ref|YP_003737842.1| - 7.3e-11 41.8 0.0 1.1e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|300712028|ref|YP_003737842.1| - 0.0021 18.1 0.0 1.1 9.3 0.0 2.5 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 gi|300712028|ref|YP_003737842.1| - 0.0043 16.6 0.0 0.082 12.4 0.0 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|300712028|ref|YP_003737842.1| - 0.012 15.5 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|300712028|ref|YP_003737842.1| - 0.038 14.4 0.2 0.35 11.2 0.0 2.3 1 1 1 2 2 2 0 AAA ATPase domain AIG1 PF04548.16 gi|300712028|ref|YP_003737842.1| - 0.046 13.0 0.0 0.065 12.5 0.0 1.2 1 0 0 1 1 1 0 AIG1 family ATP_bind_1 PF03029.17 gi|300712028|ref|YP_003737842.1| - 0.077 12.8 0.0 4 7.1 0.0 2.5 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 gi|300712028|ref|YP_003737842.1| - 0.096 13.2 0.0 0.42 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain FUSC PF04632.12 gi|300712028|ref|YP_003737842.1| - 0.12 10.9 0.3 0.16 10.5 0.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF5518 PF17647.1 gi|300712029|ref|YP_003737843.1| - 0.43 10.8 26.5 0.47 10.6 26.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5518) AbiEi_4 PF13338.6 gi|300712030|ref|YP_003737844.1| - 0.044 13.9 0.1 0.18 12.0 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin PRA-PH PF01503.17 gi|300712031|ref|YP_003737845.1| - 2.7e-16 59.8 1.2 3e-16 59.6 1.2 1.0 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|300712031|ref|YP_003737845.1| - 0.0018 18.4 2.0 0.0033 17.6 2.0 1.5 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain DNase-RNase PF02577.14 gi|300712032|ref|YP_003737846.1| - 3.3e-37 127.0 0.0 3.7e-37 126.8 0.0 1.0 1 0 0 1 1 1 1 Bifunctional nuclease FumaraseC_C PF10415.9 gi|300712032|ref|YP_003737846.1| - 0.14 12.6 0.0 15 6.1 0.0 2.3 2 0 0 2 2 2 0 Fumarase C C-terminus SNO PF01174.19 gi|300712033|ref|YP_003737847.1| - 7.1e-49 166.2 0.0 8.3e-49 166.0 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|300712033|ref|YP_003737847.1| - 3e-10 40.0 0.0 4.9e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|300712033|ref|YP_003737847.1| - 0.0002 21.2 0.0 0.00043 20.1 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|300712033|ref|YP_003737847.1| - 0.0018 18.1 0.0 0.0025 17.6 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_S51 PF03575.17 gi|300712033|ref|YP_003737847.1| - 0.0019 17.9 0.0 0.0024 17.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S51 ThiJ_like PF17124.5 gi|300712033|ref|YP_003737847.1| - 0.077 12.7 0.0 0.099 12.3 0.0 1.1 1 0 0 1 1 1 0 ThiJ/PfpI family-like Sec61_beta PF03911.16 gi|300712034|ref|YP_003737848.1| - 3.3e-16 59.0 0.1 4.4e-16 58.6 0.1 1.2 1 0 0 1 1 1 1 Sec61beta family DUF2929 PF11151.8 gi|300712034|ref|YP_003737848.1| - 0.07 13.4 0.6 0.092 13.1 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) Thioredoxin PF00085.20 gi|300712035|ref|YP_003737849.1| - 1.9e-20 72.8 0.0 2.2e-20 72.6 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|300712035|ref|YP_003737849.1| - 9.5e-07 29.2 0.4 5e-06 26.9 0.4 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|300712035|ref|YP_003737849.1| - 6.8e-06 26.3 0.1 0.001 19.4 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_5 PF13743.6 gi|300712035|ref|YP_003737849.1| - 0.00012 21.8 0.1 0.00014 21.6 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_9 PF14595.6 gi|300712035|ref|YP_003737849.1| - 0.00029 20.6 0.0 0.00034 20.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DUF836 PF05768.14 gi|300712035|ref|YP_003737849.1| - 0.00066 20.0 0.0 0.00077 19.8 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Redoxin PF08534.10 gi|300712035|ref|YP_003737849.1| - 0.0011 18.7 0.4 0.036 13.8 0.1 2.0 1 1 1 2 2 2 2 Redoxin Thioredoxin_3 PF13192.6 gi|300712035|ref|YP_003737849.1| - 0.0012 18.8 0.0 0.0015 18.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain TraF PF13728.6 gi|300712035|ref|YP_003737849.1| - 0.0012 18.7 0.0 0.0015 18.4 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.21 gi|300712035|ref|YP_003737849.1| - 0.0047 16.8 0.2 0.031 14.2 0.2 1.8 1 1 0 1 1 1 1 AhpC/TSA family Glutaredoxin PF00462.24 gi|300712035|ref|YP_003737849.1| - 0.0092 16.2 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DSBA PF01323.20 gi|300712035|ref|YP_003737849.1| - 0.01 15.7 0.2 0.16 11.8 0.0 2.0 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Thioredoxin_7 PF13899.6 gi|300712035|ref|YP_003737849.1| - 0.074 13.2 0.3 0.17 12.1 0.1 1.7 2 1 0 2 2 2 0 Thioredoxin-like KaiB PF07689.12 gi|300712035|ref|YP_003737849.1| - 0.15 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 KaiB domain F420_oxidored PF03807.17 gi|300712036|ref|YP_003737850.1| - 1.9e-20 73.2 0.0 3.3e-20 72.4 0.0 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|300712036|ref|YP_003737850.1| - 1.2e-06 28.2 0.0 1.7e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|300712036|ref|YP_003737850.1| - 2.2e-05 24.5 0.0 3.1e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sacchrp_dh_NADP PF03435.18 gi|300712036|ref|YP_003737850.1| - 0.00096 19.4 0.0 0.0018 18.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 gi|300712036|ref|YP_003737850.1| - 0.0041 17.9 0.0 0.007 17.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.24 gi|300712036|ref|YP_003737850.1| - 0.0093 16.4 0.0 0.025 15.0 0.0 1.6 1 1 1 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 gi|300712036|ref|YP_003737850.1| - 0.01 15.7 1.2 0.014 15.3 0.3 1.7 1 1 1 2 2 2 0 NAD(P)H-binding PDH PF02153.17 gi|300712036|ref|YP_003737850.1| - 0.016 14.3 0.0 0.022 13.8 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase KR PF08659.10 gi|300712036|ref|YP_003737850.1| - 0.036 14.0 0.1 0.077 12.9 0.1 1.5 2 0 0 2 2 2 0 KR domain NmrA PF05368.13 gi|300712036|ref|YP_003737850.1| - 0.049 13.2 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family DapB_N PF01113.20 gi|300712036|ref|YP_003737850.1| - 0.052 13.7 0.0 0.095 12.8 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus IlvN PF07991.12 gi|300712036|ref|YP_003737850.1| - 0.089 12.4 0.0 0.24 10.9 0.0 1.7 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain CoA_binding PF02629.19 gi|300712036|ref|YP_003737850.1| - 0.12 13.1 0.1 0.42 11.3 0.1 1.9 2 1 0 2 2 2 0 CoA binding domain Hydrolase PF00702.26 gi|300712038|ref|YP_003737852.1| - 5.6e-10 39.9 0.1 8.6e-06 26.2 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|300712038|ref|YP_003737852.1| - 6.5e-08 32.9 0.0 8.4e-07 29.2 0.0 2.1 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|300712038|ref|YP_003737852.1| - 2e-05 24.6 1.9 3.2e-05 23.9 0.3 2.2 2 1 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|300712038|ref|YP_003737852.1| - 0.0018 18.7 0.9 0.65 10.4 0.1 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase SecE PF00584.20 gi|300712039|ref|YP_003737853.1| - 0.099 12.6 0.4 0.099 12.6 0.4 3.7 4 0 0 4 4 4 0 SecE/Sec61-gamma subunits of protein translocation complex UPF0146 PF03686.13 gi|300712040|ref|YP_003737854.1| - 5.7e-32 110.3 0.0 6.9e-32 110.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) HEM4 PF02602.15 gi|300712040|ref|YP_003737854.1| - 0.0025 17.2 0.0 0.003 17.0 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Peptidase_M54 PF07998.11 gi|300712041|ref|YP_003737855.1| - 3.4e-22 79.4 0.1 4.4e-22 79.0 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M54 Reprolysin_4 PF13583.6 gi|300712041|ref|YP_003737855.1| - 8e-05 22.4 0.0 9.4e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M10 PF00413.24 gi|300712041|ref|YP_003737855.1| - 0.0001 22.2 0.0 0.0001 22.2 0.0 1.2 1 0 0 1 1 1 1 Matrixin Reprolysin_3 PF13582.6 gi|300712041|ref|YP_003737855.1| - 0.00023 21.7 0.1 0.00029 21.4 0.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like DUF4953 PF16313.5 gi|300712041|ref|YP_003737855.1| - 0.00046 19.5 0.0 0.00063 19.0 0.0 1.1 1 0 0 1 1 1 1 Met-zincin Reprolysin_5 PF13688.6 gi|300712041|ref|YP_003737855.1| - 0.00099 19.3 0.0 0.0011 19.2 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_2 PF13574.6 gi|300712041|ref|YP_003737855.1| - 0.0053 16.7 0.1 0.0063 16.4 0.1 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|300712041|ref|YP_003737855.1| - 0.0055 15.7 0.0 0.0069 15.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase M66 Metallopep PF12044.8 gi|300712041|ref|YP_003737855.1| - 0.037 12.6 0.1 0.048 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative peptidase family Zincin_1 PF06262.11 gi|300712041|ref|YP_003737855.1| - 0.037 14.1 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 Zincin-like metallopeptidase Peptidase_M57 PF12388.8 gi|300712041|ref|YP_003737855.1| - 0.099 12.2 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase adh_short_C2 PF13561.6 gi|300712042|ref|YP_003737856.1| - 3.3e-64 216.6 0.0 3.9e-64 216.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300712042|ref|YP_003737856.1| - 4.2e-48 163.4 0.0 5.4e-48 163.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300712042|ref|YP_003737856.1| - 1.6e-12 47.7 0.0 2.1e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300712042|ref|YP_003737856.1| - 0.00062 19.3 0.1 0.001 18.6 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|300712042|ref|YP_003737856.1| - 0.0036 17.2 0.2 0.038 13.9 0.2 2.1 2 0 0 2 2 2 1 NAD(P)H-binding THF_DHG_CYH_C PF02882.19 gi|300712042|ref|YP_003737856.1| - 0.0079 15.5 0.0 0.016 14.6 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ApbA PF02558.16 gi|300712042|ref|YP_003737856.1| - 0.016 14.9 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Usp PF00582.26 gi|300712043|ref|YP_003737857.1| - 8.5e-25 87.9 2.0 9.7e-25 87.7 2.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Dpy-30 PF05186.13 gi|300712044|ref|YP_003737858.1| - 0.033 13.9 0.3 0.058 13.1 0.3 1.4 1 0 0 1 1 1 0 Dpy-30 motif ABC_tran PF00005.27 gi|300712045|ref|YP_003737859.1| - 5.3e-41 140.3 0.0 6.6e-19 68.8 0.0 2.8 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|300712045|ref|YP_003737859.1| - 8.8e-15 54.7 4.4 0.00075 19.0 0.0 4.7 5 0 0 5 5 5 4 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|300712045|ref|YP_003737859.1| - 2.5e-12 46.4 0.7 5.5e-12 45.3 0.7 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.6 gi|300712045|ref|YP_003737859.1| - 2.9e-10 40.5 5.4 0.032 14.0 0.0 4.2 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|300712045|ref|YP_003737859.1| - 4.4e-06 26.8 0.0 0.017 15.0 0.0 2.9 2 1 0 3 3 3 2 Rad17 P-loop domain AAA_16 PF13191.6 gi|300712045|ref|YP_003737859.1| - 7.5e-06 26.4 0.2 0.0093 16.4 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|300712045|ref|YP_003737859.1| - 1.6e-05 25.4 0.0 0.14 12.6 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|300712045|ref|YP_003737859.1| - 1.9e-05 25.3 0.5 0.076 13.5 0.1 2.5 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|300712045|ref|YP_003737859.1| - 4.2e-05 23.9 0.0 0.52 10.7 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_22 PF13401.6 gi|300712045|ref|YP_003737859.1| - 6.4e-05 23.3 0.0 0.037 14.3 0.0 2.8 2 1 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|300712045|ref|YP_003737859.1| - 8.6e-05 21.8 0.0 0.0015 17.8 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain AAA_29 PF13555.6 gi|300712045|ref|YP_003737859.1| - 8.6e-05 22.2 0.2 0.25 11.1 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|300712045|ref|YP_003737859.1| - 0.00017 21.5 0.0 0.33 10.8 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_24 PF13479.6 gi|300712045|ref|YP_003737859.1| - 0.00039 20.2 0.1 0.23 11.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain Fer4 PF00037.27 gi|300712045|ref|YP_003737859.1| - 0.00057 19.6 1.6 0.00057 19.6 1.6 3.0 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|300712045|ref|YP_003737859.1| - 0.00075 19.5 12.7 0.015 15.3 2.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_15 PF13175.6 gi|300712045|ref|YP_003737859.1| - 0.001 18.9 0.4 1.5 8.5 0.1 2.5 3 0 0 3 3 3 2 AAA ATPase domain AAA_33 PF13671.6 gi|300712045|ref|YP_003737859.1| - 0.0014 18.8 1.4 0.44 10.7 0.0 3.0 4 0 0 4 4 2 1 AAA domain NACHT PF05729.12 gi|300712045|ref|YP_003737859.1| - 0.0022 17.9 0.1 0.7 9.8 0.0 2.7 2 0 0 2 2 2 1 NACHT domain AAA_14 PF13173.6 gi|300712045|ref|YP_003737859.1| - 0.0024 17.9 0.0 2.1 8.4 0.0 3.2 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 gi|300712045|ref|YP_003737859.1| - 0.0033 17.2 0.1 2.3 7.9 0.0 2.8 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_25 PF13481.6 gi|300712045|ref|YP_003737859.1| - 0.0047 16.5 0.4 1.1 8.8 0.0 3.3 4 0 0 4 4 3 1 AAA domain AAA_18 PF13238.6 gi|300712045|ref|YP_003737859.1| - 0.013 16.1 0.2 6.9 7.2 0.0 3.0 2 1 1 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|300712045|ref|YP_003737859.1| - 0.036 14.1 0.6 6.5 6.8 0.0 3.1 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) PFK PF00365.20 gi|300712045|ref|YP_003737859.1| - 0.037 13.4 0.0 1.7 7.9 0.0 2.1 2 0 0 2 2 2 0 Phosphofructokinase MMR_HSR1 PF01926.23 gi|300712045|ref|YP_003737859.1| - 0.063 13.4 0.1 3.6 7.7 0.0 2.6 2 1 0 2 2 2 0 50S ribosome-binding GTPase Fer4_7 PF12838.7 gi|300712045|ref|YP_003737859.1| - 0.07 13.7 10.8 0.15 12.6 10.8 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF87 PF01935.17 gi|300712045|ref|YP_003737859.1| - 0.084 12.9 0.5 5.7 7.0 0.2 2.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_28 PF13521.6 gi|300712045|ref|YP_003737859.1| - 0.09 13.0 0.4 14 5.8 0.0 3.3 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 gi|300712045|ref|YP_003737859.1| - 0.099 12.6 4.7 3.2 7.6 0.0 3.5 4 0 0 4 4 4 0 NTPase Cytidylate_kin PF02224.18 gi|300712045|ref|YP_003737859.1| - 0.12 12.1 2.4 6.3 6.5 0.1 2.8 3 0 0 3 3 3 0 Cytidylate kinase Fer4_10 PF13237.6 gi|300712045|ref|YP_003737859.1| - 0.25 11.5 12.5 0.64 10.2 1.7 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain MeaB PF03308.16 gi|300712045|ref|YP_003737859.1| - 0.3 10.0 0.9 17 4.3 0.2 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Fer4_2 PF12797.7 gi|300712045|ref|YP_003737859.1| - 0.4 10.9 11.3 0.14 12.3 1.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.6 gi|300712045|ref|YP_003737859.1| - 0.54 10.5 11.2 1.1 9.5 11.2 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|300712045|ref|YP_003737859.1| - 1.1 9.4 9.0 2 8.6 9.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|300712045|ref|YP_003737859.1| - 8 7.5 10.8 1.2 10.1 1.6 2.1 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain SepZ PF06066.11 gi|300712046|ref|YP_003737860.1| - 0.28 11.4 5.0 0.53 10.5 4.2 1.8 1 1 1 2 2 2 0 SepZ HTH_24 PF13412.6 gi|300712047|ref|YP_003737861.1| - 4.3e-05 23.0 0.1 5.8e-05 22.6 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|300712047|ref|YP_003737861.1| - 0.0093 15.6 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|300712047|ref|YP_003737861.1| - 0.017 15.0 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|300712047|ref|YP_003737861.1| - 0.025 14.4 0.1 0.037 13.9 0.1 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|300712047|ref|YP_003737861.1| - 0.044 13.6 0.2 0.056 13.3 0.2 1.2 1 1 0 1 1 1 0 TFIIE alpha subunit MarR_2 PF12802.7 gi|300712047|ref|YP_003737861.1| - 0.066 13.1 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 MarR family DUF2540 PF10802.8 gi|300712047|ref|YP_003737861.1| - 0.097 12.8 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2540) T2SSE PF00437.20 gi|300712048|ref|YP_003737862.1| - 1.3e-12 47.3 0.1 2.5e-12 46.5 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein Thymidylate_kin PF02223.17 gi|300712048|ref|YP_003737862.1| - 0.00039 20.1 0.0 0.0022 17.7 0.0 2.1 1 1 1 2 2 2 1 Thymidylate kinase NTPase_1 PF03266.15 gi|300712048|ref|YP_003737862.1| - 0.00041 20.3 0.0 0.0011 18.9 0.0 1.7 1 0 0 1 1 1 1 NTPase AAA_16 PF13191.6 gi|300712048|ref|YP_003737862.1| - 0.00088 19.7 0.1 0.0041 17.5 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 gi|300712048|ref|YP_003737862.1| - 0.0016 19.0 0.7 0.017 15.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain KH_1 PF00013.29 gi|300712048|ref|YP_003737862.1| - 0.0016 18.2 0.2 0.0049 16.7 0.2 1.9 1 0 0 1 1 1 1 KH domain AAA_30 PF13604.6 gi|300712048|ref|YP_003737862.1| - 0.0062 16.3 0.0 0.02 14.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain PIN PF01850.21 gi|300712048|ref|YP_003737862.1| - 0.0062 17.0 0.6 0.017 15.6 0.1 2.1 2 0 0 2 2 1 1 PIN domain ATP_bind_1 PF03029.17 gi|300712048|ref|YP_003737862.1| - 0.0081 16.0 0.1 0.014 15.2 0.1 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein IstB_IS21 PF01695.17 gi|300712048|ref|YP_003737862.1| - 0.0094 15.7 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_29 PF13555.6 gi|300712048|ref|YP_003737862.1| - 0.011 15.5 0.2 0.035 13.8 0.0 1.9 2 0 0 2 2 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|300712048|ref|YP_003737862.1| - 0.011 15.0 0.0 0.027 13.8 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin KTI12 PF08433.10 gi|300712048|ref|YP_003737862.1| - 0.012 15.1 0.1 0.033 13.6 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 ATPase PF06745.13 gi|300712048|ref|YP_003737862.1| - 0.012 15.0 0.0 0.062 12.6 0.0 2.0 2 0 0 2 2 2 0 KaiC APS_kinase PF01583.20 gi|300712048|ref|YP_003737862.1| - 0.012 15.5 0.0 0.031 14.2 0.0 1.7 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_5 PF07728.14 gi|300712048|ref|YP_003737862.1| - 0.014 15.3 0.0 0.044 13.8 0.0 1.9 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|300712048|ref|YP_003737862.1| - 0.018 15.5 0.0 0.048 14.1 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) KH_2 PF07650.17 gi|300712048|ref|YP_003737862.1| - 0.022 14.6 0.8 0.063 13.1 0.8 1.8 1 0 0 1 1 1 0 KH domain AAA_22 PF13401.6 gi|300712048|ref|YP_003737862.1| - 0.033 14.5 0.0 0.096 13.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|300712048|ref|YP_003737862.1| - 0.037 13.5 0.0 0.076 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 gi|300712048|ref|YP_003737862.1| - 0.048 13.8 0.1 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain VraX PF17412.2 gi|300712048|ref|YP_003737862.1| - 0.049 13.3 0.2 0.11 12.2 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function KH_5 PF13184.6 gi|300712048|ref|YP_003737862.1| - 0.059 13.5 0.3 0.21 11.7 0.3 2.0 1 0 0 1 1 1 0 NusA-like KH domain ABC_tran PF00005.27 gi|300712048|ref|YP_003737862.1| - 0.094 13.2 0.0 0.3 11.6 0.0 1.9 2 0 0 2 2 1 0 ABC transporter RuvB_N PF05496.12 gi|300712048|ref|YP_003737862.1| - 0.098 12.4 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 gi|300712048|ref|YP_003737862.1| - 0.11 12.9 0.0 0.26 11.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 gi|300712048|ref|YP_003737862.1| - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 gi|300712048|ref|YP_003737862.1| - 0.13 12.2 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 gi|300712048|ref|YP_003737862.1| - 0.19 11.6 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain LsmAD PF06741.13 gi|300712048|ref|YP_003737862.1| - 0.26 11.9 2.7 7 7.3 0.5 3.0 3 0 0 3 3 2 0 LsmAD domain AAA_25 PF13481.6 gi|300712048|ref|YP_003737862.1| - 0.27 10.8 1.5 0.71 9.4 0.3 2.4 2 1 0 2 2 2 0 AAA domain SLATT_1 PF18181.1 gi|300712049|ref|YP_003737863.1| - 1.7 8.6 3.6 1.6 8.7 0.3 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Ribosomal_L21e PF01157.18 gi|300712050|ref|YP_003737864.1| - 0.2 11.5 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L21e Methyltransf_34 PF11312.8 gi|300712050|ref|YP_003737864.1| - 0.2 10.8 0.0 0.24 10.6 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Peptidase_M20 PF01546.28 gi|300712051|ref|YP_003737865.1| - 2.3e-27 96.0 5.6 9.5e-27 94.0 5.6 1.8 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|300712051|ref|YP_003737865.1| - 5.5e-17 61.7 0.1 9.3e-17 60.9 0.1 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M32 PF02074.15 gi|300712053|ref|YP_003737867.1| - 8.7e-177 588.8 0.0 1e-176 588.5 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase CdiI_2 PF18593.1 gi|300712053|ref|YP_003737867.1| - 0.067 13.9 3.4 0.27 11.9 0.2 3.4 4 0 0 4 4 4 0 CdiI immunity protein CbtA PF09490.10 gi|300712054|ref|YP_003737868.1| - 0.0092 15.8 1.7 0.01 15.6 1.7 1.1 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) LapA_dom PF06305.11 gi|300712054|ref|YP_003737868.1| - 2.1 8.2 6.2 1.6 8.6 1.8 2.0 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain EamA PF00892.20 gi|300712056|ref|YP_003737870.1| - 8.7e-09 35.7 18.4 1.1e-08 35.4 18.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family Mg_trans_NIPA PF05653.14 gi|300712056|ref|YP_003737870.1| - 0.00096 18.3 6.2 0.00096 18.3 6.2 1.2 1 1 0 1 1 1 1 Magnesium transporter NIPA TMEM234 PF10639.9 gi|300712056|ref|YP_003737870.1| - 0.059 13.4 3.1 0.052 13.6 2.1 1.5 1 1 0 1 1 1 0 Putative transmembrane family 234 7TMR-DISM_7TM PF07695.11 gi|300712056|ref|YP_003737870.1| - 0.66 9.8 14.0 0.24 11.3 10.3 1.8 1 1 0 1 1 1 0 7TM diverse intracellular signalling DUF3464 PF11947.8 gi|300712056|ref|YP_003737870.1| - 8.3 6.1 12.9 0.93 9.2 1.9 2.2 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 Abhydrolase_2 PF02230.16 gi|300712057|ref|YP_003737871.1| - 5.2e-18 65.6 0.0 8.4e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 gi|300712057|ref|YP_003737871.1| - 3.3e-10 39.8 0.0 7.7e-05 22.3 0.0 2.7 2 1 1 3 3 3 2 Prolyl oligopeptidase family DLH PF01738.18 gi|300712057|ref|YP_003737871.1| - 4.1e-10 39.6 0.0 9e-10 38.5 0.0 1.5 1 1 0 1 1 1 1 Dienelactone hydrolase family Esterase PF00756.20 gi|300712057|ref|YP_003737871.1| - 1.8e-05 24.5 0.0 7.3e-05 22.5 0.0 2.0 1 1 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 gi|300712057|ref|YP_003737871.1| - 9.1e-05 21.8 0.0 0.28 10.4 0.0 2.7 1 1 1 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 gi|300712057|ref|YP_003737871.1| - 0.00013 21.7 0.0 0.0002 21.1 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 gi|300712057|ref|YP_003737871.1| - 0.0003 20.5 0.0 0.00041 20.0 0.0 1.4 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 gi|300712057|ref|YP_003737871.1| - 0.00042 21.0 8.3 0.00092 19.9 8.3 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family LIP PF03583.14 gi|300712057|ref|YP_003737871.1| - 0.00056 19.3 0.0 0.23 10.7 0.1 2.1 1 1 1 2 2 2 2 Secretory lipase Abhydrolase_3 PF07859.13 gi|300712057|ref|YP_003737871.1| - 0.04 13.8 0.1 1.2 8.9 0.0 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|300712057|ref|YP_003737871.1| - 0.063 13.2 0.0 7.4 6.4 0.0 2.1 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_4 PF08386.10 gi|300712057|ref|YP_003737871.1| - 0.074 13.2 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Zn-ribbon_8 PF09723.10 gi|300712058|ref|YP_003737872.1| - 0.25 11.5 3.8 0.26 11.4 0.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain YhfH PF14149.6 gi|300712058|ref|YP_003737872.1| - 7.2 6.7 8.0 59 3.8 7.4 2.1 1 1 1 2 2 2 0 YhfH-like protein DZR PF12773.7 gi|300712059|ref|YP_003737873.1| - 0.0071 16.3 0.3 0.0093 16.0 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|300712059|ref|YP_003737873.1| - 0.021 15.0 3.2 0.038 14.1 3.2 1.5 1 1 0 1 1 1 0 Zinc ribbon domain UPF0167 PF03691.14 gi|300712059|ref|YP_003737873.1| - 0.075 12.8 0.1 0.075 12.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) UvrD-helicase PF00580.21 gi|300712060|ref|YP_003737874.1| - 7.2e-25 88.2 0.1 4.9e-23 82.1 0.1 2.4 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|300712060|ref|YP_003737874.1| - 3.5e-23 82.6 0.0 9.2e-23 81.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain UvrD_C PF13361.6 gi|300712060|ref|YP_003737874.1| - 1.2e-17 64.4 0.2 4.2e-10 39.5 0.1 2.5 2 1 1 3 3 3 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 gi|300712060|ref|YP_003737874.1| - 4.8e-10 39.1 0.4 0.0014 18.4 0.0 2.6 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_30 PF13604.6 gi|300712060|ref|YP_003737874.1| - 5e-06 26.4 0.2 0.0041 16.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 gi|300712060|ref|YP_003737874.1| - 1.5e-05 24.8 0.0 3.6 7.3 0.1 4.0 3 1 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 gi|300712060|ref|YP_003737874.1| - 0.0012 19.2 0.0 0.58 10.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|300712060|ref|YP_003737874.1| - 0.0022 17.8 0.0 0.014 15.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain Herpes_ori_bp PF02399.15 gi|300712060|ref|YP_003737874.1| - 0.009 14.1 0.0 0.016 13.3 0.0 1.3 1 0 0 1 1 1 1 Origin of replication binding protein DEAD PF00270.29 gi|300712060|ref|YP_003737874.1| - 0.092 12.5 0.0 6.2 6.6 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_25 PF13481.6 gi|300712060|ref|YP_003737874.1| - 0.18 11.4 2.0 1.7 8.2 0.0 3.1 3 0 0 3 3 3 0 AAA domain AAA_17 PF13207.6 gi|300712060|ref|YP_003737874.1| - 3.1 8.2 5.2 11 6.5 2.0 3.0 2 1 0 2 2 2 0 AAA domain Peptidase_M24 PF00557.24 gi|300712061|ref|YP_003737875.1| - 7.3e-38 130.4 0.3 9.8e-38 129.9 0.3 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Pyridox_ox_2 PF12900.7 gi|300712062|ref|YP_003737876.1| - 2e-17 63.5 0.4 2.3e-17 63.3 0.4 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|300712062|ref|YP_003737876.1| - 0.00013 22.0 0.0 0.00017 21.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF4754 PF15946.5 gi|300712062|ref|YP_003737876.1| - 0.039 14.2 0.0 0.075 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4754) MycE_N PF17843.1 gi|300712062|ref|YP_003737876.1| - 0.048 14.1 0.1 0.086 13.3 0.1 1.4 1 0 0 1 1 1 0 MycE methyltransferase N-terminal DUF4064 PF13273.6 gi|300712063|ref|YP_003737877.1| - 0.18 12.1 4.6 0.22 11.8 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) DUF4233 PF14017.6 gi|300712064|ref|YP_003737878.1| - 0.07 13.5 2.3 0.084 13.2 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4233) Lum_binding PF00677.17 gi|300712065|ref|YP_003737879.1| - 1.1e-46 156.7 0.5 4.5e-24 84.3 0.1 2.0 2 0 0 2 2 2 2 Lumazine binding domain PrsW-protease PF13367.6 gi|300712066|ref|YP_003737880.1| - 1e-44 152.3 15.1 1e-44 152.3 15.1 1.9 2 0 0 2 2 2 1 PrsW family intramembrane metalloprotease DUF5373 PF17343.2 gi|300712066|ref|YP_003737880.1| - 0.16 11.8 3.0 0.24 11.2 3.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5373) DUF402 PF04167.13 gi|300712068|ref|YP_003737882.1| - 1.5e-16 60.4 2.1 2.5e-16 59.6 2.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF402) DUF5611 PF18446.1 gi|300712069|ref|YP_003737883.1| - 1.9e-31 109.0 0.1 2.2e-31 108.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) DZR PF12773.7 gi|300712070|ref|YP_003737884.1| - 0.018 15.1 0.8 1.1 9.3 0.2 2.3 2 0 0 2 2 2 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|300712070|ref|YP_003737884.1| - 0.04 13.4 2.0 0.46 10.0 0.3 2.8 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_9 PF14369.6 gi|300712070|ref|YP_003737884.1| - 0.38 11.0 6.2 2.3 8.5 0.1 3.4 2 1 1 3 3 3 0 zinc-ribbon zf-ribbon_3 PF13248.6 gi|300712070|ref|YP_003737884.1| - 0.7 9.4 7.1 30 4.2 4.4 3.1 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|300712070|ref|YP_003737884.1| - 1.2 9.1 4.5 28 4.8 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|300712070|ref|YP_003737884.1| - 2.6 7.4 5.3 2.3 7.6 1.4 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|300712070|ref|YP_003737884.1| - 3.3 7.5 6.4 38 4.2 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Anti-TRAP PF15777.5 gi|300712070|ref|YP_003737884.1| - 3.7 7.6 6.3 4.3 7.4 0.6 3.1 2 1 1 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-FPG_IleRS PF06827.14 gi|300712070|ref|YP_003737884.1| - 4.6 7.2 6.6 31 4.6 2.1 2.7 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS HTH_20 PF12840.7 gi|300712071|ref|YP_003737885.1| - 6.3e-06 26.2 0.3 8.9e-06 25.7 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300712071|ref|YP_003737885.1| - 0.002 18.0 0.3 0.0027 17.5 0.3 1.1 1 0 0 1 1 1 1 MarR family GGDEF_2 PF17853.1 gi|300712071|ref|YP_003737885.1| - 0.0089 16.3 0.1 0.0099 16.1 0.1 1.2 1 0 0 1 1 1 1 GGDEF-like domain HTH_47 PF16221.5 gi|300712071|ref|YP_003737885.1| - 0.084 12.5 0.1 0.096 12.3 0.1 1.1 1 0 0 1 1 1 0 winged helix-turn-helix TrmB PF01978.19 gi|300712071|ref|YP_003737885.1| - 0.13 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|300712071|ref|YP_003737885.1| - 0.15 12.5 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator GCV_T PF01571.21 gi|300712072|ref|YP_003737886.1| - 6.6e-42 143.7 0.0 9e-42 143.2 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|300712072|ref|YP_003737886.1| - 4e-12 45.9 0.0 1e-11 44.6 0.0 1.8 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain FAD_binding_3 PF01494.19 gi|300712073|ref|YP_003737887.1| - 2e-10 40.5 5.2 9.5e-08 31.7 1.4 2.9 2 1 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 gi|300712073|ref|YP_003737887.1| - 2.4e-10 40.0 0.0 1.3e-05 24.4 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein DAO PF01266.24 gi|300712073|ref|YP_003737887.1| - 2.4e-06 27.4 0.1 0.056 13.0 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300712073|ref|YP_003737887.1| - 1.2e-05 24.7 0.4 0.00011 21.5 0.2 2.0 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|300712073|ref|YP_003737887.1| - 6.7e-05 22.1 2.5 0.00014 21.1 0.7 2.0 1 1 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|300712073|ref|YP_003737887.1| - 0.00016 20.5 0.0 0.0016 17.2 0.0 2.0 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|300712073|ref|YP_003737887.1| - 0.00039 20.6 0.3 0.0017 18.6 0.3 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|300712073|ref|YP_003737887.1| - 0.00068 19.1 0.1 0.00097 18.6 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|300712073|ref|YP_003737887.1| - 0.0036 16.6 0.1 0.013 14.7 0.1 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|300712073|ref|YP_003737887.1| - 0.13 11.3 0.1 0.18 10.9 0.1 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Sortilin-Vps10 PF15902.5 gi|300712074|ref|YP_003737888.1| - 3e-14 52.7 0.0 6.5e-06 25.2 0.0 3.7 1 1 3 4 4 4 4 Sortilin, neurotensin receptor 3, BNR PF02012.20 gi|300712074|ref|YP_003737888.1| - 9e-12 43.1 10.6 0.053 13.5 0.1 5.8 5 0 0 5 5 5 5 BNR/Asp-box repeat PSII_BNR PF14870.6 gi|300712074|ref|YP_003737888.1| - 6.9e-10 38.7 0.6 6.2e-05 22.4 0.0 4.0 2 1 1 4 4 4 2 Photosynthesis system II assembly factor YCF48 BNR_2 PF13088.6 gi|300712074|ref|YP_003737888.1| - 0.0012 18.2 2.3 0.018 14.4 0.5 3.3 1 1 0 2 2 2 1 BNR repeat-like domain DUF4185 PF13810.6 gi|300712074|ref|YP_003737888.1| - 0.0067 15.7 4.1 5.7 6.1 0.1 4.1 2 1 2 4 4 4 2 Domain of unknown function (DUF4185) Mu-transpos_C PF09299.11 gi|300712074|ref|YP_003737888.1| - 0.29 11.1 1.1 33 4.5 0.3 3.3 3 0 0 3 3 3 0 Mu transposase, C-terminal UvrA_inter PF17760.1 gi|300712075|ref|YP_003737889.1| - 1.2e-33 115.5 0.1 1e-32 112.4 0.0 2.7 4 0 0 4 4 2 1 UvrA interaction domain UvrA_DNA-bind PF17755.1 gi|300712075|ref|YP_003737889.1| - 4.7e-31 107.4 1.2 3.2e-28 98.3 0.1 4.2 4 1 1 5 5 5 1 UvrA DNA-binding domain ABC_tran PF00005.27 gi|300712075|ref|YP_003737889.1| - 5e-21 75.7 0.0 1.3e-10 42.0 0.0 4.1 3 2 0 3 3 3 3 ABC transporter SMC_N PF02463.19 gi|300712075|ref|YP_003737889.1| - 1.1e-10 41.4 0.0 0.01 15.3 0.0 4.1 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|300712075|ref|YP_003737889.1| - 1.9e-08 33.9 0.0 0.0035 17.0 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|300712075|ref|YP_003737889.1| - 4.9e-07 30.3 0.1 0.023 15.1 0.0 3.4 3 0 0 3 3 3 2 AAA ATPase domain ATPase PF06745.13 gi|300712075|ref|YP_003737889.1| - 3.6e-06 26.5 0.2 0.0089 15.4 0.0 3.2 3 0 0 3 3 3 1 KaiC DnaJ_CXXCXGXG PF00684.19 gi|300712075|ref|YP_003737889.1| - 4.8e-06 26.8 4.0 0.013 15.8 0.9 3.3 3 0 0 3 3 3 1 DnaJ central domain AAA_22 PF13401.6 gi|300712075|ref|YP_003737889.1| - 1.6e-05 25.2 0.0 0.14 12.4 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_23 PF13476.6 gi|300712075|ref|YP_003737889.1| - 5.7e-05 23.7 0.1 0.024 15.2 0.0 2.9 3 0 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 gi|300712075|ref|YP_003737889.1| - 8.2e-05 22.6 0.0 0.6 10.0 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_25 PF13481.6 gi|300712075|ref|YP_003737889.1| - 0.00016 21.3 0.0 0.67 9.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|300712075|ref|YP_003737889.1| - 0.00046 20.0 0.0 0.3 10.7 0.0 3.6 4 0 0 4 4 4 1 AAA ATPase domain APS_kinase PF01583.20 gi|300712075|ref|YP_003737889.1| - 0.00083 19.3 0.2 2.1 8.2 0.0 3.2 3 0 0 3 3 3 1 Adenylylsulphate kinase AAA_14 PF13173.6 gi|300712075|ref|YP_003737889.1| - 0.00098 19.2 0.0 0.53 10.3 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_21 PF13304.6 gi|300712075|ref|YP_003737889.1| - 0.0011 18.8 7.1 3 7.6 0.0 4.4 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 gi|300712075|ref|YP_003737889.1| - 0.0019 18.7 0.0 1.6 9.3 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|300712075|ref|YP_003737889.1| - 0.0033 17.6 0.3 4.4 7.4 0.0 3.5 4 1 0 4 4 3 1 AAA domain cobW PF02492.19 gi|300712075|ref|YP_003737889.1| - 0.0039 16.8 0.0 0.69 9.5 0.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|300712075|ref|YP_003737889.1| - 0.0055 16.0 0.0 1.1 8.5 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 gi|300712075|ref|YP_003737889.1| - 0.011 15.7 0.0 0.53 10.2 0.0 2.4 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 gi|300712075|ref|YP_003737889.1| - 0.02 14.6 0.1 0.76 9.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|300712075|ref|YP_003737889.1| - 0.02 14.8 0.0 9.7 6.0 0.0 2.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Viral_helicase1 PF01443.18 gi|300712075|ref|YP_003737889.1| - 0.025 14.3 0.0 0.86 9.3 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 gi|300712075|ref|YP_003737889.1| - 0.034 14.5 0.0 1.3 9.5 0.0 2.4 2 0 0 2 2 2 0 RNA helicase AAA_30 PF13604.6 gi|300712075|ref|YP_003737889.1| - 0.048 13.4 0.4 3.2 7.4 0.1 3.0 3 0 0 3 3 3 0 AAA domain CK2S PF15011.6 gi|300712075|ref|YP_003737889.1| - 0.079 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Casein Kinase 2 substrate NB-ARC PF00931.22 gi|300712075|ref|YP_003737889.1| - 0.089 12.0 0.0 0.95 8.6 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|300712075|ref|YP_003737889.1| - 0.12 12.5 0.1 4.3 7.4 0.0 2.9 3 0 0 3 3 3 0 50S ribosome-binding GTPase Zn-ribbon_8 PF09723.10 gi|300712075|ref|YP_003737889.1| - 0.27 11.4 5.5 25 5.1 0.6 3.5 3 0 0 3 3 3 0 Zinc ribbon domain DUF87 PF01935.17 gi|300712075|ref|YP_003737889.1| - 0.33 11.0 3.3 1.3 9.0 0.0 3.2 4 0 0 4 4 3 0 Helicase HerA, central domain Anti-TRAP PF15777.5 gi|300712075|ref|YP_003737889.1| - 0.38 10.7 6.3 24 5.0 0.0 3.8 3 1 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein RIO1 PF01163.22 gi|300712076|ref|YP_003737890.1| - 5.2e-47 159.9 0.1 7e-47 159.5 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|300712076|ref|YP_003737890.1| - 4.1e-26 91.0 0.0 8.1e-26 90.1 0.0 1.5 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 gi|300712076|ref|YP_003737890.1| - 0.00013 22.0 3.6 0.11 12.4 0.7 3.1 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase PF00069.25 gi|300712076|ref|YP_003737890.1| - 0.00069 19.1 0.0 0.0012 18.3 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Aldo_ket_red PF00248.21 gi|300712077|ref|YP_003737891.1| - 5.5e-60 203.0 0.0 1.7e-57 194.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Methyltransf_11 PF08241.12 gi|300712078|ref|YP_003737892.1| - 2e-23 82.8 0.0 3.1e-23 82.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300712078|ref|YP_003737892.1| - 1.7e-20 73.5 0.0 2.5e-20 73.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300712078|ref|YP_003737892.1| - 4.3e-18 65.7 0.0 5.4e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300712078|ref|YP_003737892.1| - 4.7e-14 52.9 0.0 7.3e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300712078|ref|YP_003737892.1| - 7.8e-14 51.7 0.0 9.8e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300712078|ref|YP_003737892.1| - 2.2e-12 46.8 0.0 2.8e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|300712078|ref|YP_003737892.1| - 6.6e-06 25.9 0.0 9.4e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|300712078|ref|YP_003737892.1| - 0.0022 17.9 0.2 0.0073 16.2 0.2 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase NodS PF05401.11 gi|300712078|ref|YP_003737892.1| - 0.0022 17.6 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|300712078|ref|YP_003737892.1| - 0.0039 16.8 0.0 0.0067 16.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_29 PF03141.16 gi|300712078|ref|YP_003737892.1| - 0.0045 15.6 0.0 0.0054 15.3 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_17 PF12692.7 gi|300712078|ref|YP_003737892.1| - 0.058 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase TrmB PF01978.19 gi|300712079|ref|YP_003737893.1| - 2.7e-20 72.0 0.1 2.7e-19 68.8 0.1 2.2 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|300712079|ref|YP_003737893.1| - 8.5e-05 21.8 0.1 0.00012 21.4 0.1 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.10 gi|300712079|ref|YP_003737893.1| - 0.0044 16.8 0.0 0.012 15.4 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF2250 PF10007.9 gi|300712079|ref|YP_003737893.1| - 0.048 13.8 0.0 0.1 12.7 0.0 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Ribosomal_L15e PF00827.17 gi|300712080|ref|YP_003737894.1| - 8.4e-79 263.7 6.4 9.3e-79 263.6 6.4 1.0 1 0 0 1 1 1 1 Ribosomal L15 DEPP PF15343.6 gi|300712080|ref|YP_003737894.1| - 0.26 11.3 0.0 0.26 11.3 0.0 2.1 1 1 0 2 2 2 0 Decidual protein induced by progesterone family ThiF PF00899.21 gi|300712081|ref|YP_003737895.1| - 2.4e-65 220.3 0.0 3.1e-65 220.0 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 gi|300712081|ref|YP_003737895.1| - 0.00079 19.7 1.4 0.006 16.8 1.4 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 gi|300712081|ref|YP_003737895.1| - 0.0014 18.7 0.1 0.0045 17.1 0.1 1.8 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase PglD_N PF17836.1 gi|300712081|ref|YP_003737895.1| - 0.036 14.7 0.2 0.067 13.8 0.2 1.4 1 0 0 1 1 1 0 PglD N-terminal domain 3HCDH_N PF02737.18 gi|300712081|ref|YP_003737895.1| - 0.19 11.6 0.1 0.26 11.1 0.1 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|300712081|ref|YP_003737895.1| - 0.2 11.0 0.3 1.7 8.0 0.1 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|300712081|ref|YP_003737895.1| - 0.42 11.1 2.3 1.6 9.2 0.9 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding ABC_transp_aux PF09822.9 gi|300712082|ref|YP_003737896.1| - 7.3e-06 25.6 0.0 1.3e-05 24.8 0.0 1.4 1 1 0 1 1 1 1 ABC-type uncharacterized transport system DUF4350 PF14258.6 gi|300712082|ref|YP_003737896.1| - 8.9e-06 26.1 0.1 2.5e-05 24.6 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4350) TAT_signal PF10518.9 gi|300712082|ref|YP_003737896.1| - 0.016 15.0 1.0 0.034 14.0 1.0 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Robl_LC7 PF03259.17 gi|300712082|ref|YP_003737896.1| - 0.036 13.8 0.1 0.079 12.7 0.1 1.5 1 0 0 1 1 1 0 Roadblock/LC7 domain DUF4159 PF13709.6 gi|300712082|ref|YP_003737896.1| - 0.037 13.4 0.0 0.061 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4159) BPL_LplA_LipB PF03099.19 gi|300712083|ref|YP_003737897.1| - 9.2e-11 41.8 0.0 1.3e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DUF371 PF04027.13 gi|300712084|ref|YP_003737898.1| - 9.9e-54 180.9 0.0 1.1e-53 180.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) Fn3-like PF14310.6 gi|300712084|ref|YP_003737898.1| - 0.065 13.4 0.1 5.6 7.2 0.0 2.5 2 1 0 2 2 2 0 Fibronectin type III-like domain GHL6 PF14871.6 gi|300712084|ref|YP_003737898.1| - 0.078 13.1 0.0 0.14 12.3 0.0 1.3 1 1 0 1 1 1 0 Hypothetical glycosyl hydrolase 6 HhH-GPD PF00730.25 gi|300712085|ref|YP_003737899.1| - 8.1e-19 68.1 0.0 1.1e-18 67.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|300712085|ref|YP_003737899.1| - 0.00032 20.4 0.1 0.0015 18.3 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|300712085|ref|YP_003737899.1| - 0.0056 17.0 9.5 0.012 15.9 9.5 1.6 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|300712085|ref|YP_003737899.1| - 0.0088 16.6 0.3 0.28 11.8 0.0 2.4 1 1 1 2 2 2 1 Helix-hairpin-helix domain PRiA4_ORF3 PF07929.11 gi|300712085|ref|YP_003737899.1| - 0.11 12.2 0.1 0.36 10.5 0.1 1.9 1 0 0 1 1 1 0 Plasmid pRiA4b ORF-3-like protein HHH_2 PF12826.7 gi|300712085|ref|YP_003737899.1| - 0.17 12.0 0.0 3.2 7.9 0.0 2.4 2 1 0 2 2 2 0 Helix-hairpin-helix motif Abhydrolase_5 PF12695.7 gi|300712086|ref|YP_003737900.1| - 9.9e-48 162.0 0.0 1.2e-47 161.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|300712086|ref|YP_003737900.1| - 5.8e-05 22.5 0.0 0.0011 18.3 0.0 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|300712086|ref|YP_003737900.1| - 0.00054 20.6 1.0 0.00054 20.6 1.0 1.9 1 1 1 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|300712086|ref|YP_003737900.1| - 0.0084 15.8 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 gi|300712086|ref|YP_003737900.1| - 0.056 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) DsbB PF02600.16 gi|300712087|ref|YP_003737901.1| - 3.3e-18 66.5 8.4 3.1e-17 63.4 8.4 1.9 1 1 0 1 1 1 1 Disulfide bond formation protein DsbB MitoNEET_N PF10660.9 gi|300712087|ref|YP_003737901.1| - 0.42 10.7 0.0 0.42 10.7 0.0 2.3 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus KH_7 PF17214.3 gi|300712088|ref|YP_003737902.1| - 7.7e-31 105.9 0.4 6.1e-28 96.6 0.2 2.8 2 0 0 2 2 2 2 KH domain Beta-Casp PF10996.8 gi|300712088|ref|YP_003737902.1| - 6.8e-23 81.1 0.0 1.4e-22 80.1 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|300712088|ref|YP_003737902.1| - 1.4e-15 56.9 0.0 3.8e-15 55.6 0.0 1.8 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|300712088|ref|YP_003737902.1| - 8.6e-13 48.7 1.8 3e-12 47.0 1.8 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|300712088|ref|YP_003737902.1| - 2.7e-12 46.5 0.0 4.9e-12 45.7 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|300712088|ref|YP_003737902.1| - 5.6e-10 39.1 0.1 1e-09 38.2 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|300712088|ref|YP_003737902.1| - 3.9e-07 29.8 0.0 2.2e-06 27.4 0.0 2.2 2 0 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.6 gi|300712088|ref|YP_003737902.1| - 0.00029 20.8 0.0 0.00062 19.7 0.0 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|300712088|ref|YP_003737902.1| - 0.026 14.4 0.0 0.074 12.9 0.0 1.8 1 0 0 1 1 1 0 KH domain KH_4 PF13083.6 gi|300712088|ref|YP_003737902.1| - 0.094 12.6 0.1 0.26 11.2 0.1 1.7 1 0 0 1 1 1 0 KH domain DHquinase_II PF01220.19 gi|300712088|ref|YP_003737902.1| - 0.2 11.3 0.0 0.39 10.4 0.0 1.4 1 0 0 1 1 1 0 Dehydroquinase class II CytB6-F_Fe-S PF08802.10 gi|300712092|ref|YP_003737906.1| - 4.8 7.3 8.8 5.1 7.2 0.6 2.4 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Asn_synthase PF00733.21 gi|300712093|ref|YP_003737907.1| - 3e-08 33.7 0.3 0.0076 15.9 0.0 2.3 2 0 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|300712093|ref|YP_003737907.1| - 3.7e-08 33.3 0.0 6.6e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|300712093|ref|YP_003737907.1| - 1.2e-06 28.7 0.3 3.4e-06 27.3 0.1 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain NIPSNAP PF07978.13 gi|300712093|ref|YP_003737907.1| - 0.0095 16.1 0.1 0.022 15.0 0.1 1.5 1 0 0 1 1 1 1 NIPSNAP tRNA-synt_2b PF00587.25 gi|300712094|ref|YP_003737908.1| - 4.3e-21 75.7 0.0 6.6e-21 75.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|300712094|ref|YP_003737908.1| - 2.4e-19 69.3 0.0 8.8e-19 67.5 0.0 1.9 1 1 2 3 3 3 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|300712094|ref|YP_003737908.1| - 2.9e-19 69.1 1.5 6.6e-19 67.9 1.5 1.6 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal YceD PF02620.17 gi|300712094|ref|YP_003737908.1| - 0.11 12.6 0.6 0.58 10.3 0.5 2.2 2 0 0 2 2 2 0 Large ribosomal RNA subunit accumulation protein YceD GATase_2 PF00310.21 gi|300712095|ref|YP_003737909.1| - 1.1e-151 505.3 0.0 2.3e-151 504.3 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferases class-II Glu_synthase PF01645.17 gi|300712095|ref|YP_003737909.1| - 1.4e-149 498.2 0.6 3.2e-148 493.8 0.2 2.2 2 0 0 2 2 2 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|300712095|ref|YP_003737909.1| - 3.1e-115 384.5 0.0 1.9e-114 381.9 0.0 2.0 2 0 0 2 2 2 1 Glutamate synthase central domain GXGXG PF01493.19 gi|300712095|ref|YP_003737909.1| - 4e-76 254.8 13.2 6.8e-76 254.1 13.2 1.4 1 0 0 1 1 1 1 GXGXG motif NMO PF03060.15 gi|300712095|ref|YP_003737909.1| - 7.1e-05 22.3 1.9 0.00013 21.5 1.9 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|300712095|ref|YP_003737909.1| - 0.037 13.0 9.5 0.0063 15.6 3.3 2.5 3 0 0 3 3 3 0 FMN-dependent dehydrogenase GATase_6 PF13522.6 gi|300712095|ref|YP_003737909.1| - 0.061 13.5 0.1 0.33 11.2 0.1 2.3 2 0 0 2 2 2 0 Glutamine amidotransferase domain IMPDH PF00478.25 gi|300712095|ref|YP_003737909.1| - 0.062 12.3 2.6 0.18 10.8 1.6 2.2 1 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain SpoVR PF04293.13 gi|300712095|ref|YP_003737909.1| - 0.074 11.7 0.2 0.12 11.0 0.2 1.2 1 0 0 1 1 1 0 SpoVR like protein FixQ PF05545.11 gi|300712096|ref|YP_003737910.1| - 0.006 16.5 0.4 0.0066 16.4 0.4 1.2 1 0 0 1 1 1 1 Cbb3-type cytochrome oxidase component FixQ MRAP PF15183.6 gi|300712096|ref|YP_003737910.1| - 0.026 14.4 0.1 0.028 14.3 0.1 1.1 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family DUF4381 PF14316.6 gi|300712096|ref|YP_003737910.1| - 0.078 13.2 0.1 0.087 13.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Ac76 PF05814.11 gi|300712096|ref|YP_003737910.1| - 0.087 12.8 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) TMEM156 PF15106.6 gi|300712096|ref|YP_003737910.1| - 0.1 12.0 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 TMEM156 protein family PRCH PF03967.13 gi|300712096|ref|YP_003737910.1| - 0.11 12.7 0.8 0.11 12.7 0.8 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region SSF PF00474.17 gi|300712097|ref|YP_003737911.1| - 1.5e-66 224.9 29.6 2.9e-66 224.0 29.6 1.5 1 0 0 1 1 1 1 Sodium:solute symporter family EamA PF00892.20 gi|300712099|ref|YP_003737913.1| - 1.5e-36 125.6 36.7 3.7e-19 69.3 14.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family Epimerase PF01370.21 gi|300712100|ref|YP_003737914.1| - 4.2e-31 108.2 0.3 2.3e-17 63.3 0.0 2.1 1 1 1 2 2 2 2 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|300712100|ref|YP_003737914.1| - 1.1e-10 41.0 0.0 9.5e-06 24.8 0.0 2.1 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 gi|300712100|ref|YP_003737914.1| - 2.8e-09 36.8 0.0 0.00059 19.3 0.0 2.2 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 gi|300712100|ref|YP_003737914.1| - 5.3e-08 33.0 0.0 1e-07 32.0 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|300712100|ref|YP_003737914.1| - 7.6e-06 25.3 0.0 0.0037 16.5 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.17 gi|300712100|ref|YP_003737914.1| - 0.00059 19.0 0.1 0.22 10.6 0.0 2.2 1 1 0 2 2 2 2 RmlD substrate binding domain adh_short PF00106.25 gi|300712100|ref|YP_003737914.1| - 0.014 14.9 0.0 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase TrkA_N PF02254.18 gi|300712100|ref|YP_003737914.1| - 0.053 13.8 0.1 0.1 12.9 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain NmrA PF05368.13 gi|300712100|ref|YP_003737914.1| - 0.16 11.5 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Asparaginase PF00710.20 gi|300712101|ref|YP_003737915.1| - 3.2e-42 144.2 0.7 6e-42 143.3 0.1 1.7 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|300712101|ref|YP_003737915.1| - 9.9e-12 45.1 0.1 2.5e-11 43.8 0.0 1.7 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain TAT_signal PF10518.9 gi|300712101|ref|YP_003737915.1| - 0.00025 20.8 5.4 0.00025 20.8 5.4 1.9 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence PA PF02225.22 gi|300712101|ref|YP_003737915.1| - 0.21 11.7 4.5 0.1 12.6 0.4 2.4 2 1 0 2 2 2 0 PA domain Fe-ADH_2 PF13685.6 gi|300712102|ref|YP_003737916.1| - 4.5e-64 216.5 2.1 5.7e-64 216.2 2.1 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|300712102|ref|YP_003737916.1| - 2.8e-21 75.8 6.4 2.5e-20 72.7 6.4 1.9 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|300712102|ref|YP_003737916.1| - 3.7e-09 36.1 0.3 8.6e-09 34.9 0.3 1.5 1 1 0 1 1 1 1 3-dehydroquinate synthase Virul_fac_BrkB PF03631.15 gi|300712103|ref|YP_003737917.1| - 8.5e-35 120.6 26.6 1.1e-34 120.3 26.6 1.0 1 0 0 1 1 1 1 Virulence factor BrkB MaoC_dehydratas PF01575.19 gi|300712104|ref|YP_003737918.1| - 2.7e-23 81.8 0.6 3.7e-23 81.4 0.6 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|300712104|ref|YP_003737918.1| - 2.6e-08 34.1 0.4 1e-07 32.2 0.2 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase Peptidase_S9 PF00326.21 gi|300712105|ref|YP_003737919.1| - 7.4e-43 146.5 0.0 1.2e-42 145.8 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|300712105|ref|YP_003737919.1| - 1.7e-12 47.4 0.0 6.2e-12 45.5 0.0 1.8 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|300712105|ref|YP_003737919.1| - 1.6e-10 41.1 0.0 6.2e-05 22.8 0.0 2.3 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 gi|300712105|ref|YP_003737919.1| - 2e-09 37.5 0.0 3.6e-07 30.1 0.0 2.1 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|300712105|ref|YP_003737919.1| - 7.3e-08 32.0 0.0 0.00041 19.7 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 PD40 PF07676.12 gi|300712105|ref|YP_003737919.1| - 2.5e-05 24.1 8.5 0.00044 20.1 0.0 5.9 8 0 0 8 8 8 1 WD40-like Beta Propeller Repeat AXE1 PF05448.12 gi|300712105|ref|YP_003737919.1| - 0.00079 18.2 0.0 0.1 11.3 0.0 2.2 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Abhydrolase_3 PF07859.13 gi|300712105|ref|YP_003737919.1| - 0.0017 18.3 0.0 0.058 13.2 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|300712105|ref|YP_003737919.1| - 0.0028 18.3 4.4 0.0064 17.1 0.4 2.8 2 2 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|300712105|ref|YP_003737919.1| - 0.0032 17.3 0.0 2.8 7.7 0.0 2.2 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 gi|300712105|ref|YP_003737919.1| - 0.095 12.8 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein Peptidase_S9_N PF02897.15 gi|300712105|ref|YP_003737919.1| - 0.12 11.1 0.0 7.4 5.3 0.0 2.3 1 1 0 2 2 2 0 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S28 PF05577.12 gi|300712105|ref|YP_003737919.1| - 0.16 10.7 0.0 0.24 10.1 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 Glyco_trans_1_4 PF13692.6 gi|300712106|ref|YP_003737920.1| - 4.9e-14 52.9 0.1 5e-11 43.2 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|300712106|ref|YP_003737920.1| - 2e-13 50.2 0.0 2.5e-12 46.6 0.0 2.0 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|300712106|ref|YP_003737920.1| - 1.4e-11 45.1 10.3 1.4e-11 45.1 10.3 2.5 2 2 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|300712106|ref|YP_003737920.1| - 3.8e-10 40.0 3.0 5.7e-10 39.4 1.0 2.2 2 1 0 2 2 2 1 Glycosyltransferase Family 4 zf-C3HC4 PF00097.25 gi|300712106|ref|YP_003737920.1| - 0.044 13.7 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 gi|300712106|ref|YP_003737920.1| - 0.13 12.4 0.1 0.33 11.1 0.1 1.6 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Wzy_C PF04932.15 gi|300712107|ref|YP_003737921.1| - 8.2 6.0 8.9 16 5.1 8.8 1.7 1 1 0 1 1 1 0 O-Antigen ligase SUR7 PF06687.12 gi|300712107|ref|YP_003737921.1| - 8.4 6.0 7.0 12 5.4 7.0 1.3 1 1 0 1 1 1 0 SUR7/PalI family HTH_24 PF13412.6 gi|300712108|ref|YP_003737922.1| - 1.8e-10 40.2 0.0 1.1e-07 31.3 0.0 2.6 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|300712108|ref|YP_003737922.1| - 8.6e-07 28.9 5.8 3.8e-05 23.7 2.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|300712108|ref|YP_003737922.1| - 1.6e-06 27.9 0.9 0.00041 20.2 0.1 2.7 2 1 1 3 3 3 1 MarR family TrmB PF01978.19 gi|300712108|ref|YP_003737922.1| - 4.5e-05 23.2 0.0 0.00048 20.0 0.0 2.2 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300712108|ref|YP_003737922.1| - 0.00011 22.0 0.0 0.0028 17.5 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|300712108|ref|YP_003737922.1| - 0.00012 21.8 0.0 0.0036 17.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Penicillinase_R PF03965.16 gi|300712108|ref|YP_003737922.1| - 0.0006 20.1 0.0 0.11 12.9 0.0 2.4 1 1 1 2 2 2 1 Penicillinase repressor HTH_40 PF14493.6 gi|300712108|ref|YP_003737922.1| - 0.0085 16.5 0.0 0.45 11.0 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|300712108|ref|YP_003737922.1| - 0.0089 15.8 0.1 0.022 14.5 0.1 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain RP-C PF03428.13 gi|300712108|ref|YP_003737922.1| - 0.017 14.8 0.8 0.77 9.4 0.0 2.6 3 0 0 3 3 3 0 Replication protein C N-terminal domain HTH_Crp_2 PF13545.6 gi|300712108|ref|YP_003737922.1| - 0.021 14.8 0.2 0.051 13.6 0.1 1.8 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain zf-HC2 PF13490.6 gi|300712108|ref|YP_003737922.1| - 0.021 15.0 3.3 1.8 8.9 0.9 3.0 2 0 0 2 2 2 0 Putative zinc-finger BLACT_WH PF17778.1 gi|300712108|ref|YP_003737922.1| - 0.024 14.6 0.2 0.19 11.8 0.0 2.4 3 0 0 3 3 3 0 Beta-lactamase associated winged helix domain HTH_23 PF13384.6 gi|300712108|ref|YP_003737922.1| - 0.037 13.8 0.1 0.087 12.7 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_34 PF13601.6 gi|300712108|ref|YP_003737922.1| - 0.039 14.1 0.0 0.3 11.3 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|300712108|ref|YP_003737922.1| - 0.069 13.0 0.0 0.26 11.1 0.0 2.0 2 0 0 2 2 2 0 HTH DNA binding domain PAP_PilO PF06864.12 gi|300712108|ref|YP_003737922.1| - 0.14 10.9 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Pilin accessory protein (PilO) Rhodanese PF00581.20 gi|300712110|ref|YP_003737924.1| - 2.8e-28 98.6 0.0 1.2e-14 54.8 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain Pterin_bind PF00809.22 gi|300712111|ref|YP_003737925.1| - 7.5e-78 261.6 2.1 1.1e-77 261.0 2.1 1.3 1 0 0 1 1 1 1 Pterin binding enzyme Mur_ligase_M PF08245.12 gi|300712111|ref|YP_003737925.1| - 1.1e-12 48.4 0.0 1.8e-12 47.7 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|300712111|ref|YP_003737925.1| - 5.8e-11 42.5 0.0 2.1e-10 40.7 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain PEP_mutase PF13714.6 gi|300712111|ref|YP_003737925.1| - 0.09 12.2 4.7 0.065 12.7 0.4 2.7 3 0 0 3 3 3 0 Phosphoenolpyruvate phosphomutase Hexapep PF00132.24 gi|300712112|ref|YP_003737926.1| - 1.2e-14 53.4 0.4 2.1e-05 24.0 0.0 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300712112|ref|YP_003737926.1| - 0.0014 18.4 2.9 0.019 14.7 0.2 3.2 3 1 1 4 4 4 1 Hexapeptide repeat of succinyl-transferase Putative_PNPOx PF01243.20 gi|300712113|ref|YP_003737927.1| - 1.6e-08 34.6 0.0 2.2e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF2255 PF10012.9 gi|300712113|ref|YP_003737927.1| - 0.00026 21.1 0.1 0.0006 19.9 0.1 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2255) AICARFT_IMPCHas PF01808.18 gi|300712114|ref|YP_003737928.1| - 4.8e-87 292.1 0.0 6.3e-87 291.8 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme Formyl_trans_N PF00551.19 gi|300712114|ref|YP_003737928.1| - 3e-43 147.7 0.0 4.9e-43 147.0 0.0 1.4 1 0 0 1 1 1 1 Formyl transferase Lyase_1 PF00206.20 gi|300712115|ref|YP_003737929.1| - 1e-49 169.6 0.0 1.4e-49 169.2 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 gi|300712115|ref|YP_003737929.1| - 2.9e-41 140.2 0.0 4.8e-41 139.4 0.0 1.4 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal ScsC_N PF18312.1 gi|300712115|ref|YP_003737929.1| - 0.012 15.4 0.6 0.012 15.4 0.6 2.1 3 0 0 3 3 3 0 Copper resistance protein ScsC N-terminal domain CTK3_C PF12350.8 gi|300712115|ref|YP_003737929.1| - 0.05 13.7 0.6 0.13 12.4 0.6 1.6 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus ADSL_C PF10397.9 gi|300712115|ref|YP_003737929.1| - 0.47 11.0 2.5 0.81 10.3 0.1 2.6 2 1 1 3 3 3 0 Adenylosuccinate lyase C-terminus Peripla_BP_2 PF01497.18 gi|300712116|ref|YP_003737930.1| - 2.7e-20 73.0 0.0 3.7e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein YrhC PF14143.6 gi|300712117|ref|YP_003737931.1| - 2.3 8.4 6.4 3.3 7.9 0.7 2.0 2 0 0 2 2 2 0 YrhC-like protein DUF3951 PF13131.6 gi|300712117|ref|YP_003737931.1| - 6.1 7.1 7.1 3.6 7.9 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) M20_dimer PF07687.14 gi|300712118|ref|YP_003737932.1| - 3.8e-22 78.3 0.1 6.1e-22 77.6 0.1 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 gi|300712118|ref|YP_003737932.1| - 6e-22 78.4 0.0 1.2e-21 77.4 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|300712118|ref|YP_003737932.1| - 0.046 13.4 0.1 0.46 10.1 0.0 2.1 2 0 0 2 2 2 0 Peptidase family M28 DUF3494 PF11999.8 gi|300712118|ref|YP_003737932.1| - 0.046 13.3 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3494) DAP_epimerase PF01678.19 gi|300712119|ref|YP_003737933.1| - 3.6e-39 133.7 1.1 1.9e-20 73.2 0.0 2.8 2 1 0 2 2 2 2 Diaminopimelate epimerase Orn_Arg_deC_N PF02784.16 gi|300712120|ref|YP_003737934.1| - 7.4e-47 159.8 0.0 9e-47 159.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|300712120|ref|YP_003737934.1| - 2e-23 82.4 0.0 2.3e-23 82.3 0.0 1.3 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.20 gi|300712120|ref|YP_003737934.1| - 5e-06 26.3 0.0 8.1e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain THDPS_N_2 PF14805.6 gi|300712121|ref|YP_003737935.1| - 2.3e-22 79.0 1.0 3.4e-22 78.4 1.0 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep PF00132.24 gi|300712121|ref|YP_003737935.1| - 3.8e-12 45.4 5.6 3.9e-05 23.2 0.9 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300712121|ref|YP_003737935.1| - 9.7e-05 22.0 10.0 0.0016 18.2 0.8 3.2 3 1 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase DapB_C PF05173.14 gi|300712122|ref|YP_003737936.1| - 2.2e-36 124.6 0.0 3e-36 124.1 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|300712122|ref|YP_003737936.1| - 2.1e-24 86.0 0.0 3.3e-24 85.4 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus CoA_binding_2 PF13380.6 gi|300712122|ref|YP_003737936.1| - 1.6e-05 25.3 0.3 4.9e-05 23.8 0.2 1.9 2 1 0 2 2 2 1 CoA binding domain RmlD_sub_bind PF04321.17 gi|300712122|ref|YP_003737936.1| - 0.00014 21.1 0.0 0.00021 20.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 gi|300712122|ref|YP_003737936.1| - 0.00032 20.3 0.3 0.00047 19.8 0.3 1.2 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|300712122|ref|YP_003737936.1| - 0.00058 19.4 0.0 0.001 18.6 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|300712122|ref|YP_003737936.1| - 0.016 15.1 0.9 0.016 15.1 0.9 1.8 2 0 0 2 2 2 0 NAD(P)H-binding DFP PF04127.15 gi|300712122|ref|YP_003737936.1| - 0.035 13.9 0.1 0.07 13.0 0.0 1.5 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein DHDPS PF00701.22 gi|300712123|ref|YP_003737937.1| - 2.3e-90 302.2 0.0 2.6e-90 302.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family NYN PF01936.18 gi|300712124|ref|YP_003737938.1| - 6.7e-37 127.2 0.0 8.1e-37 126.9 0.0 1.0 1 0 0 1 1 1 1 NYN domain FMO-like PF00743.19 gi|300712124|ref|YP_003737938.1| - 0.016 13.7 0.0 0.022 13.2 0.0 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like HEM4 PF02602.15 gi|300712124|ref|YP_003737938.1| - 0.084 12.2 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD TraG_N PF07916.11 gi|300712125|ref|YP_003737939.1| - 0.13 11.0 3.0 0.13 11.1 3.0 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region TGT_C2 PF14810.6 gi|300712126|ref|YP_003737940.1| - 6e-24 84.0 0.0 2.9e-23 81.8 0.1 1.9 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|300712126|ref|YP_003737940.1| - 2.4e-18 65.8 0.4 3.8e-18 65.2 0.4 1.3 1 0 0 1 1 1 1 PUA domain PUA_3 PF17785.1 gi|300712126|ref|YP_003737940.1| - 0.071 12.9 0.1 0.35 10.7 0.1 2.2 2 0 0 2 2 2 0 PUA-like domain NAC PF01849.18 gi|300712128|ref|YP_003737942.1| - 5.2e-18 64.8 0.7 2.7e-17 62.5 0.2 2.0 2 0 0 2 2 2 1 NAC domain UBA PF00627.31 gi|300712128|ref|YP_003737942.1| - 0.00012 21.9 0.1 0.00012 21.9 0.1 2.0 3 0 0 3 3 3 1 UBA/TS-N domain UBA_4 PF14555.6 gi|300712128|ref|YP_003737942.1| - 0.0034 17.1 0.1 0.0063 16.3 0.1 1.4 1 0 0 1 1 1 1 UBA-like domain GCD14 PF08704.10 gi|300712129|ref|YP_003737943.1| - 1.7e-10 41.0 0.0 1.2e-08 35.0 0.0 2.0 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|300712129|ref|YP_003737943.1| - 3.9e-08 33.2 0.0 4.9e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300712129|ref|YP_003737943.1| - 6e-08 33.3 0.0 1.1e-07 32.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300712129|ref|YP_003737943.1| - 1e-06 29.3 0.1 1.9e-06 28.4 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|300712129|ref|YP_003737943.1| - 3.1e-06 26.8 0.0 3.7e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|300712129|ref|YP_003737943.1| - 4.6e-06 26.5 0.0 5.8e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|300712129|ref|YP_003737943.1| - 1.3e-05 24.8 0.0 3.4e-05 23.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|300712129|ref|YP_003737943.1| - 2.5e-05 24.2 0.0 7.8e-05 22.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|300712129|ref|YP_003737943.1| - 0.00036 21.5 0.0 0.00076 20.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|300712129|ref|YP_003737943.1| - 0.00061 19.8 0.0 0.00093 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|300712129|ref|YP_003737943.1| - 0.00082 18.7 0.0 0.001 18.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 gi|300712129|ref|YP_003737943.1| - 0.00092 19.9 0.0 0.0026 18.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|300712129|ref|YP_003737943.1| - 0.0028 17.4 0.0 0.0035 17.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|300712129|ref|YP_003737943.1| - 0.0044 16.6 0.0 0.0052 16.4 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|300712129|ref|YP_003737943.1| - 0.0065 15.6 0.0 0.0094 15.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_3 PF01596.17 gi|300712129|ref|YP_003737943.1| - 0.024 13.8 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Cons_hypoth95 PF03602.15 gi|300712129|ref|YP_003737943.1| - 0.18 11.4 0.0 0.4 10.3 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 HalOD1 PF18545.1 gi|300712130|ref|YP_003737944.1| - 1e-18 67.4 0.0 1.3e-18 67.1 0.0 1.1 1 0 0 1 1 1 1 Halobacterial output domain 1 MgtE PF01769.16 gi|300712131|ref|YP_003737945.1| - 1.4e-22 80.4 7.1 1.4e-22 80.4 7.1 1.6 2 0 0 2 2 2 1 Divalent cation transporter MgtE PF01769.16 gi|300712132|ref|YP_003737946.1| - 9.3e-23 80.9 10.3 9.3e-23 80.9 10.3 1.5 2 0 0 2 2 2 1 Divalent cation transporter TrkA_C PF02080.21 gi|300712133|ref|YP_003737947.1| - 1.7e-29 101.5 3.1 8.7e-17 60.7 0.2 2.7 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|300712133|ref|YP_003737947.1| - 3.6e-19 69.0 2.2 8.6e-10 38.9 0.7 2.6 2 0 0 2 2 2 2 PhoU domain PhoU_div PF01865.16 gi|300712133|ref|YP_003737947.1| - 0.0019 17.5 0.2 0.12 11.6 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function DUF47 TFIIS_C PF01096.18 gi|300712134|ref|YP_003737948.1| - 4.3e-19 68.1 6.5 4.3e-19 68.1 6.5 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|300712134|ref|YP_003737948.1| - 4.9e-08 32.7 1.2 4.9e-08 32.7 1.2 3.1 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit PhnA_Zn_Ribbon PF08274.12 gi|300712134|ref|YP_003737948.1| - 1.3e-05 25.1 12.4 0.00087 19.2 0.9 3.2 3 0 0 3 3 3 2 PhnA Zinc-Ribbon Zn_Tnp_IS1595 PF12760.7 gi|300712134|ref|YP_003737948.1| - 7.6e-05 22.6 4.0 0.0051 16.8 0.3 2.4 2 0 0 2 2 2 2 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|300712134|ref|YP_003737948.1| - 0.00044 20.1 11.3 0.1 12.5 0.9 2.4 2 1 0 2 2 2 2 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|300712134|ref|YP_003737948.1| - 0.00076 18.9 11.9 0.002 17.6 0.6 3.5 2 2 0 2 2 2 1 TFIIB zinc-binding DZR PF12773.7 gi|300712134|ref|YP_003737948.1| - 0.0022 18.0 10.6 0.0056 16.7 0.7 2.8 2 1 0 2 2 2 1 Double zinc ribbon zf-RING_7 PF02591.15 gi|300712134|ref|YP_003737948.1| - 0.0061 16.7 6.0 3.1 8.1 0.1 3.9 4 0 0 4 4 4 1 C4-type zinc ribbon domain zf-ribbon_3 PF13248.6 gi|300712134|ref|YP_003737948.1| - 0.029 13.8 0.5 0.029 13.8 0.5 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|300712134|ref|YP_003737948.1| - 0.049 13.4 11.6 1.2 8.9 0.2 4.1 4 0 0 4 4 4 0 Rubredoxin metal binding domain zinc-ribbons_6 PF07191.12 gi|300712134|ref|YP_003737948.1| - 0.18 11.8 10.2 0.74 9.8 0.8 2.5 2 1 0 2 2 2 0 zinc-ribbons zf-UBP PF02148.19 gi|300712134|ref|YP_003737948.1| - 0.25 11.7 6.1 0.97 9.8 0.7 2.4 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-C4pol PF14260.6 gi|300712134|ref|YP_003737948.1| - 0.28 11.7 7.6 43 4.7 7.7 2.7 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta TackOD1 PF18551.1 gi|300712134|ref|YP_003737948.1| - 0.39 10.4 9.3 10 5.7 9.3 2.5 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 Prok-RING_1 PF14446.6 gi|300712134|ref|YP_003737948.1| - 0.52 10.3 9.3 0.19 11.7 1.5 2.9 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Ribosomal_L37ae PF01780.19 gi|300712134|ref|YP_003737948.1| - 0.71 10.0 6.5 0.33 11.1 0.3 2.6 2 1 0 2 2 2 0 Ribosomal L37ae protein family zf-RRPl_C4 PF17026.5 gi|300712134|ref|YP_003737948.1| - 0.79 9.9 4.7 1.6 8.9 4.7 1.5 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type Nudix_N_2 PF14803.6 gi|300712134|ref|YP_003737948.1| - 0.99 9.4 11.4 9.9 6.2 0.0 4.0 3 1 1 4 4 4 0 Nudix N-terminal HalOD2 PF18547.1 gi|300712134|ref|YP_003737948.1| - 2 8.4 15.9 0.93 9.4 1.1 4.0 3 1 1 4 4 4 0 Halobacterial output domain 2 A2L_zn_ribbon PF08792.10 gi|300712134|ref|YP_003737948.1| - 2.1 8.1 15.9 0.88 9.4 0.5 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain CpXC PF14353.6 gi|300712134|ref|YP_003737948.1| - 2.3 8.3 8.2 2.6 8.1 4.7 2.6 1 1 1 2 2 2 0 CpXC protein zf-ACC PF17848.1 gi|300712134|ref|YP_003737948.1| - 3 8.0 15.4 5.9 7.1 0.3 4.0 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain PHD PF00628.29 gi|300712134|ref|YP_003737948.1| - 3.2 7.7 12.5 24 4.9 0.2 3.3 3 1 0 3 3 3 0 PHD-finger HypA PF01155.19 gi|300712134|ref|YP_003737948.1| - 4.1 7.5 11.1 23 5.0 5.3 2.9 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RRN7 PF11781.8 gi|300712134|ref|YP_003737948.1| - 4.6 7.0 11.6 30 4.4 0.0 4.1 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF3268 PF11672.8 gi|300712134|ref|YP_003737948.1| - 5.4 7.4 7.4 1.4 9.3 0.8 2.4 2 1 0 2 2 2 0 zinc-finger-containing domain DNA_RNApol_7kD PF03604.13 gi|300712134|ref|YP_003737948.1| - 5.4 6.8 9.5 13 5.5 2.6 3.5 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 gi|300712134|ref|YP_003737948.1| - 5.5 6.8 12.0 21 5.0 0.1 4.1 4 0 0 4 4 4 0 zinc-ribbon domain DUF3797 PF12677.7 gi|300712134|ref|YP_003737948.1| - 7 6.6 7.8 0.51 10.3 1.6 2.3 2 2 0 2 2 2 0 Domain of unknown function (DUF3797) zf-RING_5 PF14634.6 gi|300712134|ref|YP_003737948.1| - 8 6.5 11.3 33 4.5 0.1 3.3 2 1 0 2 2 2 0 zinc-RING finger domain MFS_1 PF07690.16 gi|300712136|ref|YP_003737950.1| - 8.4e-50 169.7 50.7 1.7e-25 89.7 21.6 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|300712136|ref|YP_003737950.1| - 1.5e-07 30.7 29.9 9.6e-06 24.7 11.0 2.7 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|300712136|ref|YP_003737950.1| - 7.9e-07 28.3 15.0 0.0018 17.2 0.0 3.4 2 1 1 3 3 3 3 MFS_1 like family MFS_4 PF06779.14 gi|300712136|ref|YP_003737950.1| - 0.049 12.9 32.9 0.039 13.3 29.8 2.9 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB 2-Hacid_dh_C PF02826.19 gi|300712137|ref|YP_003737951.1| - 1.9e-54 183.7 0.0 2.6e-54 183.3 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|300712137|ref|YP_003737951.1| - 1.1e-24 86.6 0.2 1.2e-24 86.5 0.2 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|300712137|ref|YP_003737951.1| - 0.046 13.9 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ECH_1 PF00378.20 gi|300712138|ref|YP_003737952.1| - 3.3e-67 226.4 0.1 3.8e-67 226.3 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|300712138|ref|YP_003737952.1| - 1.3e-34 120.2 0.1 1.6e-34 119.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase SDH_sah PF01972.16 gi|300712138|ref|YP_003737952.1| - 6.6e-05 22.1 0.0 0.0001 21.4 0.0 1.2 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Peptidase_S49 PF01343.18 gi|300712138|ref|YP_003737952.1| - 0.16 11.9 0.1 0.78 9.7 0.0 2.0 2 0 0 2 2 2 0 Peptidase family S49 GntR PF00392.21 gi|300712139|ref|YP_003737953.1| - 0.0067 16.0 0.1 0.021 14.5 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|300712139|ref|YP_003737953.1| - 0.046 13.6 0.2 0.14 12.1 0.1 1.9 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB NUDIX PF00293.28 gi|300712141|ref|YP_003737955.1| - 9.6e-18 64.5 0.4 1.1e-17 64.3 0.4 1.0 1 0 0 1 1 1 1 NUDIX domain AAA_17 PF13207.6 gi|300712141|ref|YP_003737955.1| - 0.02 15.3 0.1 0.024 15.1 0.1 1.3 1 1 0 1 1 1 0 AAA domain NUDIX_4 PF14815.6 gi|300712141|ref|YP_003737955.1| - 0.047 13.7 0.1 0.062 13.3 0.1 1.2 1 0 0 1 1 1 0 NUDIX domain ATPgrasp_ST PF14397.6 gi|300712142|ref|YP_003737956.1| - 1.8e-29 102.9 0.0 2.4e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 gi|300712142|ref|YP_003737956.1| - 0.23 10.7 0.0 5.5 6.2 0.0 2.1 2 0 0 2 2 2 0 YheC/D like ATP-grasp Ribosomal_S10 PF00338.22 gi|300712143|ref|YP_003737957.1| - 6.8e-16 58.3 0.0 7.9e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Phage_tail_X PF05489.12 gi|300712143|ref|YP_003737957.1| - 0.17 11.6 0.3 0.33 10.7 0.2 1.6 2 0 0 2 2 2 0 Phage Tail Protein X Peptidase_M20 PF01546.28 gi|300712144|ref|YP_003737958.1| - 5.9e-22 78.4 4.1 1.5e-21 77.0 4.1 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|300712144|ref|YP_003737958.1| - 4.2e-12 46.0 0.3 1e-11 44.7 0.3 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain DJ-1_PfpI PF01965.24 gi|300712145|ref|YP_003737959.1| - 2.2e-53 180.5 0.0 2.4e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|300712145|ref|YP_003737959.1| - 0.00012 21.9 0.0 0.00014 21.7 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I ThiJ_like PF17124.5 gi|300712145|ref|YP_003737959.1| - 0.00018 21.2 0.0 0.26 10.9 0.0 2.6 1 1 1 2 2 2 2 ThiJ/PfpI family-like GATase_3 PF07685.14 gi|300712145|ref|YP_003737959.1| - 0.026 14.1 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain His_Phos_1 PF00300.22 gi|300712145|ref|YP_003737959.1| - 0.058 13.1 0.0 0.082 12.6 0.0 1.2 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 1) Peptidase_C26 PF07722.13 gi|300712145|ref|YP_003737959.1| - 0.18 11.6 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase C26 Na_H_antiporter PF03553.14 gi|300712146|ref|YP_003737960.1| - 6.8e-58 196.3 41.6 1.3e-53 182.2 21.0 2.1 1 1 1 2 2 2 2 Na+/H+ antiporter family Trp_halogenase PF04820.14 gi|300712147|ref|YP_003737961.1| - 4.4e-11 42.3 1.4 2.9e-08 33.0 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|300712147|ref|YP_003737961.1| - 1.8e-09 37.2 4.0 1e-05 24.8 2.0 2.4 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 gi|300712147|ref|YP_003737961.1| - 2.2e-07 30.5 7.2 5.6e-06 25.8 7.2 2.6 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|300712147|ref|YP_003737961.1| - 1.6e-06 27.8 10.6 0.00034 20.1 0.1 2.6 3 1 0 3 3 3 2 FAD dependent oxidoreductase DAO PF01266.24 gi|300712147|ref|YP_003737961.1| - 1.9e-06 27.7 12.6 0.00022 20.9 0.0 2.9 3 0 0 3 3 3 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|300712147|ref|YP_003737961.1| - 3.2e-06 26.5 0.2 4.9e-06 25.9 0.2 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|300712147|ref|YP_003737961.1| - 2.6e-05 24.3 6.0 2.9e-05 24.2 0.5 2.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|300712147|ref|YP_003737961.1| - 0.0001 21.1 1.8 0.00093 18.0 0.8 2.1 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|300712147|ref|YP_003737961.1| - 0.00021 20.6 1.0 0.00086 18.6 0.5 2.2 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.14 gi|300712147|ref|YP_003737961.1| - 0.0006 19.1 1.1 0.0006 19.1 1.1 2.5 2 1 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|300712147|ref|YP_003737961.1| - 0.0014 18.3 0.6 0.0029 17.3 0.2 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 gi|300712147|ref|YP_003737961.1| - 0.0063 16.4 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|300712147|ref|YP_003737961.1| - 0.016 14.5 0.5 0.057 12.7 0.4 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|300712147|ref|YP_003737961.1| - 0.027 13.5 3.5 0.5 9.4 0.2 2.5 3 0 0 3 3 3 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|300712147|ref|YP_003737961.1| - 0.042 14.4 1.2 0.15 12.6 0.5 2.7 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase Fer2 PF00111.27 gi|300712148|ref|YP_003737962.1| - 5.1e-11 42.4 2.9 7.1e-11 41.9 2.9 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|300712148|ref|YP_003737962.1| - 0.008 16.2 0.3 0.01 15.8 0.3 1.3 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DHODB_Fe-S_bind PF10418.9 gi|300712148|ref|YP_003737962.1| - 0.042 13.6 0.4 0.094 12.5 0.4 1.5 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF2299 PF10061.9 gi|300712149|ref|YP_003737963.1| - 0.026 14.3 0.0 0.056 13.2 0.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) MOSC PF03473.17 gi|300712150|ref|YP_003737964.1| - 2.7e-07 30.7 0.1 3.9e-07 30.1 0.1 1.2 1 0 0 1 1 1 1 MOSC domain FmdA_AmdA PF03069.15 gi|300712152|ref|YP_003737966.1| - 3.7e-74 249.8 0.0 6.4e-37 127.3 0.1 2.0 1 1 1 2 2 2 2 Acetamidase/Formamidase family Exo_endo_phos PF03372.23 gi|300712153|ref|YP_003737967.1| - 3.5e-19 69.3 2.4 4.9e-19 68.8 2.4 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family GntP_permease PF02447.16 gi|300712154|ref|YP_003737968.1| - 5.2e-88 295.7 27.5 6.1e-88 295.4 27.5 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 gi|300712154|ref|YP_003737968.1| - 9.5e-16 57.9 28.4 9.5e-16 57.9 28.4 1.7 2 0 0 2 2 2 1 Citrate transporter MR_MLE_C PF13378.6 gi|300712155|ref|YP_003737969.1| - 9.7e-57 192.0 0.9 1.4e-56 191.5 0.9 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|300712155|ref|YP_003737969.1| - 2.6e-14 53.4 0.1 5.6e-14 52.4 0.1 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Putative_PNPOx PF01243.20 gi|300712156|ref|YP_003737970.1| - 4.1e-10 39.7 0.0 6.7e-10 39.0 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|300712156|ref|YP_003737970.1| - 0.046 13.7 0.0 0.069 13.1 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DHDPS PF00701.22 gi|300712157|ref|YP_003737971.1| - 1.7e-69 233.7 0.0 1.9e-69 233.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family PA PF02225.22 gi|300712157|ref|YP_003737971.1| - 0.034 14.2 0.1 0.072 13.1 0.0 1.6 1 1 0 1 1 1 0 PA domain Asn_synthase PF00733.21 gi|300712158|ref|YP_003737972.1| - 0.027 14.1 0.0 0.059 13.0 0.0 1.5 2 0 0 2 2 2 0 Asparagine synthase Rhodanese PF00581.20 gi|300712159|ref|YP_003737973.1| - 1.2e-13 51.6 0.0 2e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Lactamase_B PF00753.27 gi|300712159|ref|YP_003737973.1| - 3.7e-11 43.4 1.2 7.4e-11 42.4 1.2 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|300712159|ref|YP_003737973.1| - 0.0026 17.3 0.1 0.013 15.1 0.1 2.1 1 1 1 2 2 2 1 Beta-lactamase superfamily domain YqcI_YcgG PF08892.11 gi|300712160|ref|YP_003737974.1| - 1.5e-75 253.7 0.0 1.7e-75 253.5 0.0 1.0 1 0 0 1 1 1 1 YqcI/YcgG family Isochorismatase PF00857.20 gi|300712161|ref|YP_003737975.1| - 6.3e-32 111.2 0.0 7.4e-32 110.9 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Catalase_C PF18011.1 gi|300712161|ref|YP_003737975.1| - 0.072 12.7 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain found in long catalases Hydrolase_3 PF08282.12 gi|300712162|ref|YP_003737976.1| - 3e-10 40.3 0.0 7.3e-09 35.7 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|300712162|ref|YP_003737976.1| - 0.19 11.2 0.1 0.73 9.3 0.0 2.0 3 0 0 3 3 3 0 Sucrose-6F-phosphate phosphohydrolase Glu_dehyd_C PF16912.5 gi|300712163|ref|YP_003737977.1| - 4.4e-101 336.7 0.0 5.8e-101 336.4 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N PF08240.12 gi|300712163|ref|YP_003737977.1| - 4.2e-12 45.9 0.0 6.5e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 gi|300712163|ref|YP_003737977.1| - 2e-06 27.7 0.2 7.4e-06 25.8 0.3 1.8 2 0 0 2 2 2 1 N-terminal domain of oxidoreductase ADH_zinc_N PF00107.26 gi|300712163|ref|YP_003737977.1| - 0.0002 21.4 0.0 0.00032 20.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Pribosyltran PF00156.27 gi|300712164|ref|YP_003737978.1| - 1.6e-16 60.2 0.0 2.6e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_7 PF02796.15 gi|300712164|ref|YP_003737978.1| - 0.0013 18.7 0.0 0.003 17.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|300712164|ref|YP_003737978.1| - 0.0022 17.7 0.0 0.0045 16.7 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_24 PF13412.6 gi|300712164|ref|YP_003737978.1| - 0.011 15.3 0.0 0.024 14.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|300712164|ref|YP_003737978.1| - 0.013 15.4 0.1 0.098 12.6 0.0 2.4 3 0 0 3 3 3 0 HTH domain PRTase_2 PF15609.6 gi|300712164|ref|YP_003737978.1| - 0.034 13.7 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase Sigma70_r4 PF04545.16 gi|300712164|ref|YP_003737978.1| - 0.04 13.5 0.0 0.084 12.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|300712164|ref|YP_003737978.1| - 0.11 12.3 0.1 0.38 10.7 0.0 1.9 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 gi|300712164|ref|YP_003737978.1| - 0.15 12.1 0.1 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain GerE PF00196.19 gi|300712164|ref|YP_003737978.1| - 0.15 11.6 0.0 0.4 10.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family Glutaredoxin PF00462.24 gi|300712165|ref|YP_003737979.1| - 1e-13 51.3 0.0 1.8e-13 50.5 0.0 1.4 2 0 0 2 2 2 1 Glutaredoxin L27_1 PF09058.10 gi|300712165|ref|YP_003737979.1| - 0.078 13.0 0.5 12 6.0 0.0 2.3 1 1 1 2 2 2 0 L27_1 PAPS_reduct PF01507.19 gi|300712167|ref|YP_003737981.1| - 2.4e-20 73.3 0.0 1.2e-08 35.2 0.0 3.1 3 0 0 3 3 3 3 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|300712167|ref|YP_003737981.1| - 0.017 14.9 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 PP-loop family Diphthami_syn_2 PF01902.17 gi|300712167|ref|YP_003737981.1| - 0.029 13.9 0.0 0.067 12.7 0.0 1.6 2 0 0 2 2 2 0 Diphthamide synthase TK PF00265.18 gi|300712167|ref|YP_003737981.1| - 0.22 11.4 0.0 0.33 10.8 0.0 1.2 1 0 0 1 1 1 0 Thymidine kinase Phage_holin_3_6 PF07332.11 gi|300712168|ref|YP_003737982.1| - 0.084 12.9 5.0 0.094 12.8 5.0 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PAPS_reduct PF01507.19 gi|300712169|ref|YP_003737983.1| - 1e-17 64.7 0.0 7.8e-16 58.6 0.0 2.6 2 1 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family Diphthami_syn_2 PF01902.17 gi|300712169|ref|YP_003737983.1| - 0.024 14.1 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 Diphthamide synthase Nre_N PF04894.12 gi|300712170|ref|YP_003737984.1| - 3.2e-97 325.6 0.0 4e-97 325.3 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|300712170|ref|YP_003737984.1| - 2e-36 124.3 0.0 3.8e-36 123.3 0.0 1.5 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Cellsynth_D PF03500.13 gi|300712170|ref|YP_003737984.1| - 0.033 14.1 0.0 0.056 13.3 0.0 1.3 1 0 0 1 1 1 0 Cellulose synthase subunit D 3-alpha PF03475.14 gi|300712170|ref|YP_003737984.1| - 0.058 13.3 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 3-alpha domain DUF302 PF03625.14 gi|300712173|ref|YP_003737987.1| - 5.6e-17 61.4 0.0 8.9e-17 60.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 CPBP PF02517.16 gi|300712174|ref|YP_003737988.1| - 4.6e-06 26.9 0.7 1.2e-05 25.6 0.7 1.9 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease Acetyltransf_1 PF00583.25 gi|300712176|ref|YP_003737990.1| - 2.5e-09 37.4 0.7 4.1e-09 36.7 0.2 1.6 2 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.6 gi|300712176|ref|YP_003737990.1| - 9.6e-05 22.4 0.1 0.00021 21.3 0.1 1.6 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.7 gi|300712176|ref|YP_003737990.1| - 0.00019 21.8 0.0 0.00032 21.1 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300712176|ref|YP_003737990.1| - 0.00086 19.2 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|300712176|ref|YP_003737990.1| - 0.016 15.8 0.1 0.025 15.2 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MM_CoA_mutase PF01642.22 gi|300712178|ref|YP_003737992.1| - 5e-226 751.2 4.4 6.1e-226 750.9 4.4 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase DUF4699 PF15770.5 gi|300712178|ref|YP_003737992.1| - 0.0068 16.2 3.2 0.012 15.4 3.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4699) Aldo_ket_red PF00248.21 gi|300712179|ref|YP_003737993.1| - 1.1e-63 215.2 0.0 2.7e-61 207.4 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family IP_trans PF02121.18 gi|300712179|ref|YP_003737993.1| - 0.12 12.0 0.0 2.2 7.8 0.0 2.1 1 1 1 2 2 2 0 Phosphatidylinositol transfer protein zinc_ribbon_15 PF17032.5 gi|300712181|ref|YP_003737995.1| - 0.00023 21.9 1.0 0.00025 21.7 1.0 1.1 1 0 0 1 1 1 1 zinc-ribbon family DZR PF12773.7 gi|300712181|ref|YP_003737995.1| - 0.00063 19.7 1.1 0.00069 19.6 1.1 1.1 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|300712181|ref|YP_003737995.1| - 0.00087 19.3 2.3 0.001 19.1 2.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NOB1_Zn_bind PF08772.11 gi|300712181|ref|YP_003737995.1| - 0.004 17.3 0.5 0.004 17.3 0.5 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like Rhodanese_C PF12368.8 gi|300712181|ref|YP_003737995.1| - 0.0043 17.4 0.7 0.0045 17.3 0.7 1.1 1 0 0 1 1 1 1 Rhodanase C-terminal NRDD PF13597.6 gi|300712181|ref|YP_003737995.1| - 0.005 15.7 1.8 0.005 15.7 1.8 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase zf-ribbon_3 PF13248.6 gi|300712181|ref|YP_003737995.1| - 0.0053 16.1 1.3 0.92 9.0 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain UPF0547 PF10571.9 gi|300712181|ref|YP_003737995.1| - 0.0076 16.3 6.1 0.92 9.6 0.2 2.2 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|300712181|ref|YP_003737995.1| - 0.0085 15.8 3.4 0.012 15.3 3.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|300712181|ref|YP_003737995.1| - 0.02 14.6 4.2 0.67 9.7 0.2 2.1 1 1 1 2 2 2 0 Ribosomal protein S27 RecR PF02132.15 gi|300712181|ref|YP_003737995.1| - 0.038 13.6 1.7 0.05 13.2 1.7 1.3 1 0 0 1 1 1 0 RecR protein Zn-ribbon_8 PF09723.10 gi|300712181|ref|YP_003737995.1| - 0.22 11.7 6.4 1 9.5 6.5 1.8 1 1 1 2 2 2 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 gi|300712181|ref|YP_003737995.1| - 0.29 10.9 5.1 0.78 9.5 5.1 1.7 1 1 0 1 1 1 0 Rubredoxin metal binding domain MaAIMP_sms PF16951.5 gi|300712182|ref|YP_003737996.1| - 0.031 14.0 1.5 0.031 14.0 1.5 1.5 2 0 0 2 2 2 0 Putative methionine and alanine importer, small subunit PsbH PF00737.20 gi|300712182|ref|YP_003737996.1| - 4.8 7.0 8.9 1.8 8.4 5.8 1.9 1 1 1 2 2 2 0 Photosystem II 10 kDa phosphoprotein TFIIB PF00382.19 gi|300712183|ref|YP_003737997.1| - 1.4e-47 159.6 3.1 5.2e-26 90.5 0.2 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|300712183|ref|YP_003737997.1| - 5.9e-17 60.9 2.0 1.2e-16 60.0 2.0 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|300712183|ref|YP_003737997.1| - 0.002 17.8 0.3 0.0044 16.7 0.3 1.6 1 0 0 1 1 1 1 A2L zinc ribbon domain Cyclin_C PF02984.19 gi|300712183|ref|YP_003737997.1| - 0.011 15.8 0.0 0.21 11.7 0.0 2.2 2 0 0 2 2 2 0 Cyclin, C-terminal domain Zn_Tnp_IS1595 PF12760.7 gi|300712183|ref|YP_003737997.1| - 0.013 15.5 0.1 0.029 14.3 0.1 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|300712183|ref|YP_003737997.1| - 0.023 14.6 2.2 0.05 13.6 2.2 1.5 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Ham1p_like PF01725.16 gi|300712183|ref|YP_003737997.1| - 0.058 13.3 0.1 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Ham1 family RB_B PF01857.20 gi|300712183|ref|YP_003737997.1| - 0.076 13.0 0.0 1.7 8.7 0.0 2.4 2 0 0 2 2 2 0 Retinoblastoma-associated protein B domain Sigma70_r4 PF04545.16 gi|300712183|ref|YP_003737997.1| - 0.078 12.5 3.0 0.37 10.3 0.1 3.4 3 1 1 4 4 4 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|300712183|ref|YP_003737997.1| - 0.1 12.4 0.8 0.76 9.7 0.1 2.8 3 0 0 3 3 3 0 Homeodomain-like domain zf-ribbon_3 PF13248.6 gi|300712183|ref|YP_003737997.1| - 0.1 12.0 1.7 0.35 10.3 1.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|300712183|ref|YP_003737997.1| - 0.14 12.6 0.8 0.35 11.3 0.2 2.0 2 0 0 2 2 2 0 Restriction alleviation protein Lar Cyclin_N PF00134.23 gi|300712183|ref|YP_003737997.1| - 0.15 11.9 0.0 0.31 10.8 0.0 1.6 1 0 0 1 1 1 0 Cyclin, N-terminal domain Zn-ribbon_8 PF09723.10 gi|300712183|ref|YP_003737997.1| - 0.36 11.0 4.1 1.3 9.2 1.1 2.5 1 1 2 3 3 3 0 Zinc ribbon domain RVT_3 PF13456.6 gi|300712184|ref|YP_003737998.1| - 1.9e-24 85.9 0.0 3.2e-24 85.1 0.0 1.4 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|300712184|ref|YP_003737998.1| - 9.3e-12 45.3 0.0 2.8e-11 43.8 0.0 1.7 1 1 0 1 1 1 1 RNase H DUF1979 PF09322.10 gi|300712184|ref|YP_003737998.1| - 0.044 13.7 0.3 0.08 12.9 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1979) Hormone_3 PF00159.18 gi|300712185|ref|YP_003737999.1| - 0.019 15.0 1.4 0.55 10.4 0.3 2.5 2 0 0 2 2 2 0 Pancreatic hormone peptide PadR PF03551.14 gi|300712186|ref|YP_003738000.1| - 1.1e-17 63.7 0.7 1.5e-17 63.3 0.7 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|300712186|ref|YP_003738000.1| - 0.00084 19.8 0.0 0.0011 19.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain RTP PF02334.16 gi|300712186|ref|YP_003738000.1| - 0.0014 19.2 0.0 0.0021 18.7 0.0 1.2 1 0 0 1 1 1 1 Replication terminator protein DUF1495 PF07381.11 gi|300712186|ref|YP_003738000.1| - 0.0045 16.8 0.0 0.0063 16.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_45 PF14947.6 gi|300712186|ref|YP_003738000.1| - 0.0088 16.0 0.1 0.013 15.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|300712186|ref|YP_003738000.1| - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) Pyrophosphatase PF00719.19 gi|300712187|ref|YP_003738001.1| - 1.1e-50 171.6 1.8 1.2e-50 171.4 1.8 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase Phosphodiest PF01663.22 gi|300712189|ref|YP_003738003.1| - 8.2e-61 206.6 0.1 9.4e-61 206.4 0.1 1.0 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|300712189|ref|YP_003738003.1| - 0.036 13.5 3.1 0.27 10.6 0.5 2.7 3 0 0 3 3 3 0 Sulfatase DUF2063 PF09836.9 gi|300712189|ref|YP_003738003.1| - 0.23 11.7 0.7 0.56 10.5 0.2 1.9 2 0 0 2 2 2 0 Putative DNA-binding domain NAD_binding_10 PF13460.6 gi|300712191|ref|YP_003738005.1| - 3.3e-16 59.7 0.0 4.1e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|300712191|ref|YP_003738005.1| - 2.9e-12 46.6 0.0 3.8e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.18 gi|300712191|ref|YP_003738005.1| - 6.7e-07 29.6 0.1 1.2e-06 28.8 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain 3Beta_HSD PF01073.19 gi|300712191|ref|YP_003738005.1| - 4e-06 26.0 0.0 7.8e-06 25.1 0.0 1.5 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|300712191|ref|YP_003738005.1| - 7.7e-06 25.2 0.0 3.4e-05 23.1 0.0 1.9 2 0 0 2 2 2 1 RmlD substrate binding domain UDPG_MGDP_dh_N PF03721.14 gi|300712191|ref|YP_003738005.1| - 0.00013 21.7 0.0 0.00021 20.9 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|300712191|ref|YP_003738005.1| - 0.00058 19.5 0.1 0.00084 19.0 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|300712191|ref|YP_003738005.1| - 0.0014 19.2 0.1 0.0026 18.3 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Pyr_redox PF00070.27 gi|300712191|ref|YP_003738005.1| - 0.0016 18.9 0.3 0.0034 17.9 0.3 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GDP_Man_Dehyd PF16363.5 gi|300712191|ref|YP_003738005.1| - 0.0067 15.9 0.0 0.022 14.2 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF1731 PF08338.11 gi|300712191|ref|YP_003738005.1| - 0.0076 16.1 0.1 0.026 14.3 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1731) GFO_IDH_MocA PF01408.22 gi|300712191|ref|YP_003738005.1| - 0.034 15.0 0.0 0.054 14.3 0.0 1.3 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_2 PF03446.15 gi|300712191|ref|YP_003738005.1| - 0.08 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|300712191|ref|YP_003738005.1| - 0.088 12.0 0.3 0.13 11.5 0.3 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Aldo_ket_red PF00248.21 gi|300712192|ref|YP_003738006.1| - 2.5e-35 122.1 0.0 2.1e-27 96.1 0.0 2.6 2 1 1 3 3 3 2 Aldo/keto reductase family Radical_SAM PF04055.21 gi|300712193|ref|YP_003738007.1| - 9.6e-13 48.8 0.0 3.1e-12 47.2 0.0 1.9 1 0 0 1 1 1 1 Radical SAM superfamily HHH PF00633.23 gi|300712193|ref|YP_003738007.1| - 4.9e-05 23.0 0.1 0.00026 20.7 0.1 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|300712193|ref|YP_003738007.1| - 0.0016 18.6 0.0 0.0035 17.6 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|300712193|ref|YP_003738007.1| - 0.039 14.5 0.0 0.12 13.0 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain Metallophos_2 PF12850.7 gi|300712194|ref|YP_003738008.1| - 2.2e-30 106.0 0.2 2.5e-30 105.8 0.2 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|300712194|ref|YP_003738008.1| - 3.1e-05 24.5 3.4 0.0015 19.0 0.2 2.3 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase HSP20 PF00011.21 gi|300712196|ref|YP_003738010.1| - 2.2e-08 34.1 0.0 3e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|300712196|ref|YP_003738010.1| - 0.12 12.0 0.0 0.37 10.4 0.0 1.9 1 1 0 1 1 1 0 HSP20-like domain found in ArsA DAO PF01266.24 gi|300712197|ref|YP_003738011.1| - 5.2e-57 194.0 13.3 5.2e-57 194.0 13.3 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300712197|ref|YP_003738011.1| - 8.7e-06 25.2 0.6 8.9e-05 21.8 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|300712197|ref|YP_003738011.1| - 8.8e-06 25.9 2.4 2.8e-05 24.3 2.4 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|300712197|ref|YP_003738011.1| - 3.4e-05 23.1 9.8 6e-05 22.3 9.8 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|300712197|ref|YP_003738011.1| - 5.5e-05 23.6 0.9 0.00013 22.4 0.9 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|300712197|ref|YP_003738011.1| - 0.00056 19.6 0.5 0.0012 18.6 0.5 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA HI0933_like PF03486.14 gi|300712197|ref|YP_003738011.1| - 0.00071 18.4 1.8 0.0011 17.8 1.8 1.2 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|300712197|ref|YP_003738011.1| - 0.0061 15.9 1.2 0.011 15.0 1.2 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|300712197|ref|YP_003738011.1| - 0.0062 15.8 1.4 0.0086 15.4 0.8 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|300712197|ref|YP_003738011.1| - 0.012 16.0 0.1 0.028 14.9 0.1 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|300712197|ref|YP_003738011.1| - 0.053 13.1 0.1 0.085 12.4 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 gi|300712197|ref|YP_003738011.1| - 0.079 12.2 0.6 0.18 11.0 0.6 1.5 1 0 0 1 1 1 0 Thi4 family FAD_binding_3 PF01494.19 gi|300712197|ref|YP_003738011.1| - 0.11 11.8 3.7 0.093 12.0 1.9 1.8 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 gi|300712197|ref|YP_003738011.1| - 0.21 11.5 1.0 0.38 10.6 1.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|300712197|ref|YP_003738011.1| - 2.2 7.0 7.3 0.43 9.4 3.8 1.6 2 0 0 2 2 2 0 Tryptophan halogenase GIDA PF01134.22 gi|300712197|ref|YP_003738011.1| - 4.8 6.1 5.9 1.4 7.9 3.0 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A NUDIX PF00293.28 gi|300712198|ref|YP_003738012.1| - 7.4e-13 48.7 0.4 1e-12 48.2 0.4 1.2 1 0 0 1 1 1 1 NUDIX domain GIT_SHD PF08518.11 gi|300712198|ref|YP_003738012.1| - 0.082 12.6 0.1 7.4 6.3 0.0 2.4 2 0 0 2 2 2 0 Spa2 homology domain (SHD) of GIT MarR_2 PF12802.7 gi|300712200|ref|YP_003738014.1| - 8.8e-07 28.7 4.3 1.2e-06 28.3 1.5 1.9 1 1 1 2 2 2 1 MarR family DprA_WH PF17782.1 gi|300712200|ref|YP_003738014.1| - 0.0014 18.7 2.8 0.0014 18.7 2.8 1.5 2 0 0 2 2 2 1 DprA winged helix domain TrmB PF01978.19 gi|300712200|ref|YP_003738014.1| - 0.0025 17.6 0.0 0.0051 16.7 0.0 1.4 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|300712200|ref|YP_003738014.1| - 0.003 17.4 0.0 0.006 16.5 0.0 1.5 2 0 0 2 2 2 1 MarR family FeoC PF09012.10 gi|300712200|ref|YP_003738014.1| - 0.0035 17.4 0.0 0.0048 16.9 0.0 1.2 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_20 PF12840.7 gi|300712200|ref|YP_003738014.1| - 0.0043 17.1 2.0 0.0084 16.2 0.8 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|300712200|ref|YP_003738014.1| - 0.026 14.3 1.8 0.079 12.8 0.2 2.2 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|300712200|ref|YP_003738014.1| - 0.027 14.2 0.2 0.045 13.5 0.1 1.4 2 0 0 2 2 2 0 LexA DNA binding domain Rrf2 PF02082.20 gi|300712200|ref|YP_003738014.1| - 0.028 14.8 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator BLACT_WH PF17778.1 gi|300712200|ref|YP_003738014.1| - 0.097 12.7 0.2 0.18 11.8 0.2 1.5 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain Fe_dep_repress PF01325.19 gi|300712200|ref|YP_003738014.1| - 0.13 12.5 0.0 1 9.6 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MFS_1 PF07690.16 gi|300712202|ref|YP_003738016.1| - 1.2e-34 119.8 73.2 2.3e-28 99.1 41.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|300712202|ref|YP_003738016.1| - 4.3e-08 32.4 11.2 6.6e-08 31.8 11.2 1.5 1 1 0 1 1 1 1 MFS_1 like family TRAM PF01938.20 gi|300712203|ref|YP_003738017.1| - 2.6e-13 49.8 3.5 2.6e-13 49.8 3.5 1.9 2 0 0 2 2 2 1 TRAM domain CxxCxxCC PF03692.15 gi|300712204|ref|YP_003738018.1| - 7.7e-14 52.1 1.0 1.5e-13 51.2 1.0 1.5 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain HIPIP PF01355.17 gi|300712204|ref|YP_003738018.1| - 0.092 13.1 2.5 0.099 13.0 0.1 2.0 2 0 0 2 2 2 0 High potential iron-sulfur protein MazG PF03819.17 gi|300712204|ref|YP_003738018.1| - 1.6 9.0 5.9 13 6.0 1.9 2.6 2 1 0 2 2 2 0 MazG nucleotide pyrophosphohydrolase domain Lactamase_B PF00753.27 gi|300712205|ref|YP_003738019.1| - 6.8e-11 42.5 10.0 3.1e-10 40.4 10.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily BLACT_WH PF17778.1 gi|300712205|ref|YP_003738019.1| - 0.0054 16.7 0.5 0.018 15.0 0.1 2.0 2 0 0 2 2 2 1 Beta-lactamase associated winged helix domain Aldolase_II PF00596.21 gi|300712205|ref|YP_003738019.1| - 0.019 14.9 0.6 0.033 14.1 0.6 1.4 1 0 0 1 1 1 0 Class II Aldolase and Adducin N-terminal domain LexA_DNA_bind PF01726.16 gi|300712205|ref|YP_003738019.1| - 0.059 13.1 0.1 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 LexA DNA binding domain Lactamase_B_3 PF13483.6 gi|300712205|ref|YP_003738019.1| - 0.11 12.4 0.3 0.15 11.9 0.3 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|300712205|ref|YP_003738019.1| - 0.12 11.8 5.2 0.4 10.2 3.3 2.5 2 1 1 3 3 3 0 Beta-lactamase superfamily domain HTH_24 PF13412.6 gi|300712206|ref|YP_003738020.1| - 0.00023 20.7 0.0 0.00039 19.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|300712206|ref|YP_003738020.1| - 0.002 18.2 0.2 0.0033 17.4 0.1 1.4 1 1 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|300712206|ref|YP_003738020.1| - 0.0093 15.6 0.2 0.016 14.8 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|300712206|ref|YP_003738020.1| - 0.011 15.6 0.1 0.015 15.1 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_12 PF08461.10 gi|300712206|ref|YP_003738020.1| - 0.038 14.0 0.5 0.15 12.1 0.2 2.1 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_36 PF13730.6 gi|300712206|ref|YP_003738020.1| - 0.14 12.1 0.0 0.65 10.0 0.0 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain Putative_PNPOx PF01243.20 gi|300712207|ref|YP_003738021.1| - 2.9e-15 56.2 0.0 3.9e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|300712207|ref|YP_003738021.1| - 1.9e-06 27.9 0.1 2.5e-06 27.6 0.1 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Methyltransf_25 PF13649.6 gi|300712208|ref|YP_003738022.1| - 6.6e-25 87.7 0.0 1e-24 87.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300712208|ref|YP_003738022.1| - 1.4e-24 86.5 0.0 2.3e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300712208|ref|YP_003738022.1| - 1.2e-19 70.6 0.0 1.5e-19 70.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|300712208|ref|YP_003738022.1| - 7.4e-17 61.5 0.0 1.1e-16 60.8 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|300712208|ref|YP_003738022.1| - 4.9e-16 59.0 0.0 6.5e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|300712208|ref|YP_003738022.1| - 1.5e-14 54.5 0.0 2.4e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 gi|300712208|ref|YP_003738022.1| - 5e-06 25.6 0.0 6.9e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 gi|300712208|ref|YP_003738022.1| - 1.5e-05 24.4 0.0 2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|300712208|ref|YP_003738022.1| - 7e-05 22.6 0.0 0.00012 21.9 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MetW PF07021.12 gi|300712208|ref|YP_003738022.1| - 0.0003 20.4 0.0 0.00091 18.9 0.0 1.7 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_15 PF09445.10 gi|300712208|ref|YP_003738022.1| - 0.00084 19.0 0.0 0.00095 18.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TPMT PF05724.11 gi|300712208|ref|YP_003738022.1| - 0.00098 18.8 0.0 0.0013 18.4 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_20 PF12147.8 gi|300712208|ref|YP_003738022.1| - 0.0011 18.2 0.0 0.0016 17.7 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|300712208|ref|YP_003738022.1| - 0.0018 17.8 0.0 0.0027 17.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|300712208|ref|YP_003738022.1| - 0.0022 17.1 0.0 0.0029 16.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|300712208|ref|YP_003738022.1| - 0.0023 17.7 0.0 0.0031 17.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|300712208|ref|YP_003738022.1| - 0.0045 17.1 0.0 0.007 16.5 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase NodS PF05401.11 gi|300712208|ref|YP_003738022.1| - 0.0075 15.9 0.0 0.0094 15.6 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TehB PF03848.14 gi|300712208|ref|YP_003738022.1| - 0.031 13.7 0.0 0.043 13.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltrans_SAM PF10672.9 gi|300712208|ref|YP_003738022.1| - 0.034 13.3 0.0 0.048 12.8 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Methyltransf_4 PF02390.17 gi|300712208|ref|YP_003738022.1| - 0.072 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_18 PF12847.7 gi|300712208|ref|YP_003738022.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF938 PF06080.12 gi|300712208|ref|YP_003738022.1| - 0.2 11.4 0.0 0.43 10.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF938) Glycos_transf_2 PF00535.26 gi|300712209|ref|YP_003738023.1| - 1.5e-16 60.6 0.1 2.8e-16 59.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300712209|ref|YP_003738023.1| - 2.9e-07 30.6 1.0 2.2e-06 27.7 1.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|300712209|ref|YP_003738023.1| - 0.032 13.7 0.0 0.22 10.9 0.0 1.9 2 0 0 2 2 2 0 Glycosyltransferase like family 2 Cpn60_TCP1 PF00118.24 gi|300712210|ref|YP_003738024.1| - 7.2e-149 496.5 11.6 8.1e-149 496.4 11.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family FumaraseC_C PF10415.9 gi|300712210|ref|YP_003738024.1| - 0.047 14.1 0.1 0.26 11.7 0.1 2.3 1 0 0 1 1 1 0 Fumarase C C-terminus UPF0126 PF03458.13 gi|300712211|ref|YP_003738025.1| - 4.2e-37 125.9 33.2 1.5e-20 72.8 8.9 2.4 3 0 0 3 3 3 2 UPF0126 domain adh_short_C2 PF13561.6 gi|300712212|ref|YP_003738026.1| - 2.9e-62 210.3 0.1 4e-62 209.8 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300712212|ref|YP_003738026.1| - 1.7e-51 174.5 0.8 2.2e-51 174.1 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300712212|ref|YP_003738026.1| - 2.9e-13 50.1 1.1 3.9e-13 49.7 1.1 1.1 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 gi|300712212|ref|YP_003738026.1| - 0.0039 16.4 0.2 0.0052 16.0 0.2 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DUF1776 PF08643.10 gi|300712212|ref|YP_003738026.1| - 0.0048 16.3 0.0 0.0074 15.7 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 gi|300712212|ref|YP_003738026.1| - 0.0065 16.0 1.5 0.013 14.9 1.5 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family SAM_adeno_trans PF01887.16 gi|300712213|ref|YP_003738027.1| - 8.8e-71 238.1 0.0 9.9e-71 237.9 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase CTP_transf_like PF01467.26 gi|300712214|ref|YP_003738028.1| - 2.4e-14 53.8 0.1 9.6e-14 51.8 0.1 1.8 1 1 0 1 1 1 1 Cytidylyltransferase-like Lon_C PF05362.13 gi|300712215|ref|YP_003738029.1| - 3.1e-36 124.9 4.8 4.8e-36 124.2 4.8 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|300712215|ref|YP_003738029.1| - 3.3e-28 98.8 0.0 7e-20 71.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|300712215|ref|YP_003738029.1| - 6.2e-17 61.7 0.1 1.1e-10 41.3 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|300712215|ref|YP_003738029.1| - 6.6e-14 52.0 0.0 3e-07 30.3 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.6 gi|300712215|ref|YP_003738029.1| - 8.3e-11 41.8 1.1 2.3e-10 40.4 1.1 1.8 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|300712215|ref|YP_003738029.1| - 9.7e-10 38.6 0.0 0.0022 18.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|300712215|ref|YP_003738029.1| - 4e-07 29.4 0.2 0.02 14.0 0.0 2.4 2 0 0 2 2 2 2 MCM P-loop domain AAA PF00004.29 gi|300712215|ref|YP_003738029.1| - 5.4e-07 30.1 0.0 0.029 14.8 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|300712215|ref|YP_003738029.1| - 3.4e-06 26.9 0.1 0.017 14.8 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|300712215|ref|YP_003738029.1| - 2.6e-05 24.5 0.0 0.00081 19.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|300712215|ref|YP_003738029.1| - 4.3e-05 22.9 1.4 0.2 10.8 0.1 3.0 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_7 PF12775.7 gi|300712215|ref|YP_003738029.1| - 9.6e-05 22.0 0.0 0.00032 20.3 0.0 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|300712215|ref|YP_003738029.1| - 0.00037 20.9 0.1 0.2 12.0 0.0 2.8 2 1 1 3 3 2 1 AAA domain AAA_3 PF07726.11 gi|300712215|ref|YP_003738029.1| - 0.00037 20.4 0.0 0.69 9.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.6 gi|300712215|ref|YP_003738029.1| - 0.00061 19.9 0.0 1.2 9.2 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain T2SSE PF00437.20 gi|300712215|ref|YP_003738029.1| - 0.0025 16.9 2.2 0.0037 16.4 0.0 2.3 3 0 0 3 3 3 1 Type II/IV secretion system protein AAA_30 PF13604.6 gi|300712215|ref|YP_003738029.1| - 0.0027 17.5 0.0 0.065 13.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 gi|300712215|ref|YP_003738029.1| - 0.007 15.5 0.0 0.017 14.3 0.0 1.6 2 0 0 2 2 1 1 Protein of unknown function (DUF815) AAA_10 PF12846.7 gi|300712215|ref|YP_003738029.1| - 0.0075 15.2 0.1 0.027 13.4 0.0 1.8 2 0 0 2 2 2 1 AAA-like domain AAA_16 PF13191.6 gi|300712215|ref|YP_003738029.1| - 0.0076 16.7 0.0 0.19 12.1 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain PhoH PF02562.16 gi|300712215|ref|YP_003738029.1| - 0.009 15.5 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 1 PhoH-like protein AAA_PrkA PF08298.11 gi|300712215|ref|YP_003738029.1| - 0.0094 14.9 0.0 1.5 7.6 0.0 2.3 2 0 0 2 2 2 1 PrkA AAA domain Parvo_NS1 PF01057.17 gi|300712215|ref|YP_003738029.1| - 0.013 14.6 0.0 0.023 13.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AgrB PF04647.15 gi|300712215|ref|YP_003738029.1| - 0.023 14.0 0.2 0.04 13.2 0.2 1.3 1 0 0 1 1 1 0 Accessory gene regulator B IstB_IS21 PF01695.17 gi|300712215|ref|YP_003738029.1| - 0.024 14.4 0.0 0.057 13.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 gi|300712215|ref|YP_003738029.1| - 0.026 14.4 0.0 0.054 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 gi|300712215|ref|YP_003738029.1| - 0.031 14.8 0.0 0.21 12.1 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_33 PF13671.6 gi|300712215|ref|YP_003738029.1| - 0.034 14.3 0.0 0.12 12.5 0.0 1.9 2 0 0 2 2 1 0 AAA domain 6PF2K PF01591.18 gi|300712215|ref|YP_003738029.1| - 0.076 12.3 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase TniB PF05621.11 gi|300712215|ref|YP_003738029.1| - 0.081 12.3 0.1 0.52 9.7 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein Ploopntkinase3 PF18751.1 gi|300712215|ref|YP_003738029.1| - 0.084 12.8 0.0 0.26 11.2 0.0 1.8 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 TrwB_AAD_bind PF10412.9 gi|300712215|ref|YP_003738029.1| - 0.091 11.7 0.0 0.17 10.7 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 gi|300712215|ref|YP_003738029.1| - 0.11 12.2 0.0 0.35 10.7 0.0 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain CPBP PF02517.16 gi|300712216|ref|YP_003738030.1| - 1.9e-12 47.4 10.8 1.9e-12 47.4 10.8 2.1 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease MotA_ExbB PF01618.16 gi|300712216|ref|YP_003738030.1| - 2.5 7.8 12.4 0.31 10.8 0.2 2.8 3 0 0 3 3 3 0 MotA/TolQ/ExbB proton channel family DNA_binding_1 PF01035.20 gi|300712217|ref|YP_003738031.1| - 8.8e-10 38.6 0.0 1.7e-09 37.6 0.0 1.5 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain IGPS PF00218.21 gi|300712218|ref|YP_003738032.1| - 1.8e-70 237.0 0.0 2.1e-70 236.8 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.19 gi|300712218|ref|YP_003738032.1| - 4.1e-05 23.4 0.3 7.8e-05 22.5 0.3 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain His_biosynth PF00977.21 gi|300712218|ref|YP_003738032.1| - 0.00042 19.8 0.0 0.012 15.1 0.1 2.4 2 1 0 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.14 gi|300712218|ref|YP_003738032.1| - 0.006 15.9 0.4 0.026 13.8 0.3 2.0 2 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|300712218|ref|YP_003738032.1| - 0.015 14.3 1.5 0.015 14.3 1.5 1.9 2 1 0 2 2 2 0 FMN-dependent dehydrogenase DUF1611_N PF17396.2 gi|300712218|ref|YP_003738032.1| - 0.016 15.4 0.1 2.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain PDZ PF00595.24 gi|300712218|ref|YP_003738032.1| - 0.018 15.4 0.2 0.44 10.9 0.0 2.2 2 0 0 2 2 2 0 PDZ domain NMO PF03060.15 gi|300712218|ref|YP_003738032.1| - 0.042 13.2 3.8 0.15 11.4 1.7 2.3 1 1 1 2 2 2 0 Nitronate monooxygenase NanE PF04131.14 gi|300712218|ref|YP_003738032.1| - 0.048 12.9 0.2 0.12 11.6 0.1 1.7 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|300712218|ref|YP_003738032.1| - 0.094 11.9 0.7 0.28 10.4 0.0 1.9 2 1 0 3 3 3 0 Dihydroorotate dehydrogenase PALP PF00291.25 gi|300712219|ref|YP_003738033.1| - 2.9e-36 125.4 1.0 4.4e-36 124.8 1.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|300712220|ref|YP_003738034.1| - 1.2e-90 302.9 0.0 1.5e-90 302.6 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|300712220|ref|YP_003738034.1| - 0.00014 21.4 0.3 0.027 14.0 0.3 2.3 2 0 0 2 2 2 2 PcrB family His_biosynth PF00977.21 gi|300712220|ref|YP_003738034.1| - 0.00079 18.9 0.0 0.003 17.0 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein DeoC PF01791.9 gi|300712221|ref|YP_003738035.1| - 2.3e-44 151.8 0.1 3e-44 151.4 0.1 1.2 1 0 0 1 1 1 1 DeoC/LacD family aldolase AP_endonuc_2 PF01261.24 gi|300712221|ref|YP_003738035.1| - 1.2e-05 24.9 0.2 0.0001 21.8 0.0 2.2 2 1 1 3 3 3 1 Xylose isomerase-like TIM barrel OMPdecase PF00215.24 gi|300712221|ref|YP_003738035.1| - 0.031 13.9 0.6 0.11 12.0 0.6 2.1 1 1 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Oxidored_molyb PF00174.19 gi|300712222|ref|YP_003738036.1| - 8.2e-45 152.5 0.0 1.2e-44 152.0 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 gi|300712222|ref|YP_003738036.1| - 2.8e-09 37.1 0.0 7.7e-09 35.7 0.0 1.7 1 1 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Big_7 PF17957.1 gi|300712222|ref|YP_003738036.1| - 0.00014 22.6 0.0 0.00035 21.3 0.0 1.8 1 0 0 1 1 1 1 Bacterial Ig domain adh_short_C2 PF13561.6 gi|300712223|ref|YP_003738037.1| - 7.9e-57 192.5 1.3 9.7e-57 192.2 1.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300712223|ref|YP_003738037.1| - 2.7e-47 160.8 1.9 3.4e-47 160.5 1.9 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300712223|ref|YP_003738037.1| - 1e-12 48.3 0.3 1.4e-12 47.9 0.3 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|300712223|ref|YP_003738037.1| - 0.00038 20.0 0.1 0.00081 18.9 0.0 1.6 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 gi|300712223|ref|YP_003738037.1| - 0.0025 17.1 0.0 0.0041 16.4 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ArsA_ATPase PF02374.15 gi|300712224|ref|YP_003738038.1| - 1.1e-84 284.2 0.0 1.2e-84 284.1 0.0 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 gi|300712224|ref|YP_003738038.1| - 1.8e-09 37.7 0.0 3.4e-09 36.8 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|300712224|ref|YP_003738038.1| - 6.5e-08 32.7 0.0 1.8e-07 31.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|300712224|ref|YP_003738038.1| - 5.8e-05 22.7 0.0 8.8e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ParA PF10609.9 gi|300712224|ref|YP_003738038.1| - 0.00036 20.1 0.2 0.011 15.2 0.1 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|300712224|ref|YP_003738038.1| - 0.00053 19.5 0.1 0.0014 18.1 0.1 1.6 1 1 1 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF2183 PF09949.9 gi|300712224|ref|YP_003738038.1| - 0.052 13.9 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) ATPase PF06745.13 gi|300712224|ref|YP_003738038.1| - 0.052 12.9 0.0 0.088 12.1 0.0 1.4 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 gi|300712224|ref|YP_003738038.1| - 0.078 12.7 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein MeaB PF03308.16 gi|300712224|ref|YP_003738038.1| - 0.088 11.8 0.2 0.18 10.8 0.2 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PhoH PF02562.16 gi|300712224|ref|YP_003738038.1| - 0.11 12.0 0.1 0.26 10.7 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein AAA_25 PF13481.6 gi|300712224|ref|YP_003738038.1| - 0.11 12.1 9.2 0.19 11.3 1.5 3.0 1 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|300712224|ref|YP_003738038.1| - 0.18 11.5 0.1 0.36 10.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain DHQS PF01959.16 gi|300712225|ref|YP_003738039.1| - 4e-144 479.9 2.7 4.5e-144 479.7 2.7 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Hint PF01079.20 gi|300712225|ref|YP_003738039.1| - 0.0031 17.1 0.0 0.091 12.3 0.0 2.3 2 0 0 2 2 2 1 Hint module Hint_2 PF13403.6 gi|300712225|ref|YP_003738039.1| - 0.025 14.9 0.6 2.4 8.4 0.1 3.1 1 1 0 2 2 2 0 Hint domain QRPTase_C PF01729.19 gi|300712225|ref|YP_003738039.1| - 0.026 14.3 1.5 0.34 10.7 0.2 2.7 3 0 0 3 3 3 0 Quinolinate phosphoribosyl transferase, C-terminal domain TNT PF14021.6 gi|300712225|ref|YP_003738039.1| - 0.14 12.7 0.0 0.28 11.7 0.0 1.5 1 0 0 1 1 1 0 Tuberculosis necrotizing toxin zinc_ribbon_2 PF13240.6 gi|300712226|ref|YP_003738040.1| - 0.0016 18.1 1.3 0.0031 17.2 1.3 1.5 1 1 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|300712226|ref|YP_003738040.1| - 0.0024 17.8 0.2 0.0037 17.2 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon DUF2614 PF11023.8 gi|300712226|ref|YP_003738040.1| - 0.022 14.8 0.6 0.13 12.4 0.0 2.0 1 1 0 2 2 2 0 Zinc-ribbon containing domain zf-NADH-PPase PF09297.11 gi|300712226|ref|YP_003738040.1| - 0.029 14.0 0.9 0.05 13.3 0.9 1.4 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|300712226|ref|YP_003738040.1| - 0.077 13.7 0.1 0.1 13.3 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbon family zf-ribbon_3 PF13248.6 gi|300712226|ref|YP_003738040.1| - 0.17 11.3 2.7 0.34 10.4 2.7 1.5 1 1 0 1 1 1 0 zinc-ribbon domain PEP-CTERM PF07589.11 gi|300712228|ref|YP_003738042.1| - 0.063 13.4 2.6 0.063 13.4 2.6 2.0 2 0 0 2 2 2 0 PEP-CTERM motif Sm_multidrug_ex PF06695.11 gi|300712228|ref|YP_003738042.1| - 0.12 13.0 2.8 0.13 12.9 2.8 1.2 1 0 0 1 1 1 0 Putative small multi-drug export protein AIRS_C PF02769.22 gi|300712229|ref|YP_003738043.1| - 2.4e-26 92.7 2.3 3.7e-26 92.1 2.3 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|300712229|ref|YP_003738043.1| - 1.1e-10 42.0 0.6 6.8e-10 39.5 0.2 2.1 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain Phos_pyr_kin PF08543.12 gi|300712230|ref|YP_003738044.1| - 1.3e-84 283.4 3.4 1.8e-84 283.0 3.4 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|300712230|ref|YP_003738044.1| - 2.9e-53 179.9 0.5 4.4e-53 179.3 0.5 1.3 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|300712230|ref|YP_003738044.1| - 5.9e-06 25.8 2.3 8.8e-06 25.2 2.3 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|300712230|ref|YP_003738044.1| - 0.019 14.4 3.7 0.027 14.0 3.7 1.2 1 0 0 1 1 1 0 Carbohydrate kinase HK PF02110.15 gi|300712230|ref|YP_003738044.1| - 0.06 12.7 1.2 0.12 11.7 1.0 1.6 1 1 0 1 1 1 0 Hydroxyethylthiazole kinase family DUF5592 PF17332.2 gi|300712231|ref|YP_003738045.1| - 0.009 16.5 0.2 0.011 16.3 0.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5592) Kinocilin PF15033.6 gi|300712231|ref|YP_003738045.1| - 0.12 12.0 1.3 0.14 11.8 1.3 1.0 1 0 0 1 1 1 0 Kinocilin protein 5-FTHF_cyc-lig PF01812.20 gi|300712232|ref|YP_003738046.1| - 6.3e-27 94.6 0.0 7.5e-27 94.4 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Cupin_2 PF07883.11 gi|300712233|ref|YP_003738047.1| - 2.5e-13 49.5 0.0 3.2e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|300712233|ref|YP_003738047.1| - 9.4e-07 28.8 0.0 1.2e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|300712233|ref|YP_003738047.1| - 0.00018 21.2 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|300712233|ref|YP_003738047.1| - 0.013 15.4 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Auxin_BP PF02041.16 gi|300712233|ref|YP_003738047.1| - 0.015 15.0 0.0 0.041 13.6 0.0 1.7 1 1 0 1 1 1 0 Auxin binding protein UPF0547 PF10571.9 gi|300712234|ref|YP_003738048.1| - 3.9e-05 23.6 2.7 0.0023 18.0 0.1 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|300712234|ref|YP_003738048.1| - 0.0011 18.3 0.6 0.36 10.3 0.0 2.2 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|300712234|ref|YP_003738048.1| - 0.0024 17.4 0.4 1.4 8.5 0.0 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|300712234|ref|YP_003738048.1| - 0.0027 17.6 0.1 1.8 8.6 0.0 2.2 2 0 0 2 2 2 2 Transposase zinc-ribbon domain zf-tcix PF14952.6 gi|300712234|ref|YP_003738048.1| - 0.0048 16.5 1.4 1.5 8.5 0.1 2.2 2 0 0 2 2 2 2 Putative treble-clef, zinc-finger, Zn-binding zf-IS66 PF13005.7 gi|300712234|ref|YP_003738048.1| - 0.0054 17.1 0.5 2.1 8.8 0.0 2.3 2 0 0 2 2 2 1 zinc-finger binding domain of transposase IS66 zinc_ribbon_2 PF13240.6 gi|300712234|ref|YP_003738048.1| - 0.0056 16.4 0.8 2.1 8.2 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-ISL3 PF14690.6 gi|300712234|ref|YP_003738048.1| - 0.0085 16.7 0.2 3.9 8.2 0.0 2.2 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn-ribbon_8 PF09723.10 gi|300712234|ref|YP_003738048.1| - 0.01 15.9 0.2 2.8 8.1 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain Methyltransf_13 PF08421.11 gi|300712234|ref|YP_003738048.1| - 0.015 15.5 0.3 0.11 12.8 0.0 2.0 2 0 0 2 2 2 0 Putative zinc binding domain DZR PF12773.7 gi|300712234|ref|YP_003738048.1| - 0.02 14.9 1.3 0.27 11.3 1.3 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-Mss51 PF13824.6 gi|300712234|ref|YP_003738048.1| - 0.02 15.0 0.1 2.7 8.1 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF35_N PF12172.8 gi|300712234|ref|YP_003738048.1| - 0.021 14.7 1.9 5.2 7.0 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin PF00301.20 gi|300712234|ref|YP_003738048.1| - 0.042 13.9 0.8 3.9 7.6 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin zf-C2H2_3 PF13878.6 gi|300712234|ref|YP_003738048.1| - 0.045 13.6 0.6 1.8 8.5 0.0 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-TFIIB PF13453.6 gi|300712234|ref|YP_003738048.1| - 0.052 12.9 1.1 5.7 6.4 0.2 2.3 2 1 0 2 2 2 0 Transcription factor zinc-finger YhfH PF14149.6 gi|300712234|ref|YP_003738048.1| - 0.069 13.1 0.6 9.9 6.2 0.1 2.2 2 0 0 2 2 2 0 YhfH-like protein A2L_zn_ribbon PF08792.10 gi|300712234|ref|YP_003738048.1| - 0.077 12.7 0.1 9.3 6.1 0.0 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|300712234|ref|YP_003738048.1| - 0.077 12.8 0.9 8 6.3 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Ogr_Delta PF04606.12 gi|300712234|ref|YP_003738048.1| - 0.18 11.8 2.2 3.2 7.8 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-NADH-PPase PF09297.11 gi|300712234|ref|YP_003738048.1| - 0.19 11.4 4.1 5.9 6.6 0.5 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2752 PF10825.8 gi|300712234|ref|YP_003738048.1| - 0.36 10.9 1.7 10 6.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF1610 PF07754.11 gi|300712234|ref|YP_003738048.1| - 3.9 7.5 8.9 5.2 7.1 0.7 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) MutS_V PF00488.21 gi|300712235|ref|YP_003738049.1| - 1.3e-85 286.2 0.0 2.5e-85 285.3 0.0 1.5 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 gi|300712235|ref|YP_003738049.1| - 2.2e-34 119.4 2.6 3.5e-34 118.7 2.6 1.4 1 0 0 1 1 1 1 MutS domain III MutS_I PF01624.20 gi|300712235|ref|YP_003738049.1| - 1.1e-25 90.1 0.0 2.1e-25 89.1 0.0 1.5 1 0 0 1 1 1 1 MutS domain I MutS_IV PF05190.18 gi|300712235|ref|YP_003738049.1| - 1.7e-22 79.6 0.3 3.2e-22 78.7 0.3 1.5 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|300712235|ref|YP_003738049.1| - 2.6e-20 73.1 0.0 7.5e-20 71.6 0.0 1.8 1 0 0 1 1 1 1 MutS domain II AAA_27 PF13514.6 gi|300712235|ref|YP_003738049.1| - 0.052 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|300712235|ref|YP_003738049.1| - 0.1 12.7 0.0 0.27 11.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain MutL_C PF08676.11 gi|300712236|ref|YP_003738050.1| - 5.6e-33 113.8 0.0 7.9e-33 113.3 0.0 1.2 1 0 0 1 1 1 1 MutL C terminal dimerisation domain DNA_mis_repair PF01119.19 gi|300712236|ref|YP_003738050.1| - 9.3e-33 112.4 0.0 1.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain HATPase_c_3 PF13589.6 gi|300712236|ref|YP_003738050.1| - 5.2e-11 42.5 0.1 8.8e-11 41.8 0.1 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|300712236|ref|YP_003738050.1| - 0.00016 22.2 0.0 0.00028 21.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhoR PF11808.8 gi|300712237|ref|YP_003738051.1| - 0.051 14.0 0.3 0.088 13.2 0.3 1.4 1 1 0 1 1 1 0 Phosphate regulon sensor protein PhoR PfkB PF00294.24 gi|300712238|ref|YP_003738052.1| - 5.6e-53 180.2 0.0 6.7e-53 180.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|300712238|ref|YP_003738052.1| - 0.032 13.6 0.0 0.05 13.0 0.0 1.3 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Pyr_redox_2 PF07992.14 gi|300712239|ref|YP_003738053.1| - 1.8e-37 129.2 0.3 2.4e-37 128.8 0.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300712239|ref|YP_003738053.1| - 2.2e-11 44.1 1.1 2e-09 37.9 0.0 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|300712239|ref|YP_003738053.1| - 2.8e-08 34.0 0.0 9.5e-08 32.3 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TrkA_N PF02254.18 gi|300712239|ref|YP_003738053.1| - 6e-05 23.3 1.0 0.0022 18.2 0.0 2.9 3 0 0 3 3 3 1 TrkA-N domain Pyr_redox_3 PF13738.6 gi|300712239|ref|YP_003738053.1| - 7.8e-05 22.1 0.0 0.00085 18.7 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|300712239|ref|YP_003738053.1| - 0.00031 20.8 1.2 0.088 12.8 0.1 3.0 2 1 0 3 3 3 1 FAD-NAD(P)-binding Thi4 PF01946.17 gi|300712239|ref|YP_003738053.1| - 0.0018 17.5 0.2 0.27 10.4 0.1 2.3 2 0 0 2 2 2 2 Thi4 family Semialdhyde_dh PF01118.24 gi|300712239|ref|YP_003738053.1| - 0.0023 18.4 0.1 5.3 7.5 0.0 3.6 3 0 0 3 3 3 1 Semialdehyde dehydrogenase, NAD binding domain GIDA PF01134.22 gi|300712239|ref|YP_003738053.1| - 0.0046 16.1 0.3 3.1 6.8 0.0 3.1 2 1 0 2 2 2 1 Glucose inhibited division protein A Sacchrp_dh_NADP PF03435.18 gi|300712239|ref|YP_003738053.1| - 0.0056 16.9 0.1 1.7 8.9 0.0 2.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Lycopene_cycl PF05834.12 gi|300712239|ref|YP_003738053.1| - 0.014 14.5 0.8 0.24 10.4 0.2 2.8 4 0 0 4 4 4 0 Lycopene cyclase protein UDPG_MGDP_dh_N PF03721.14 gi|300712239|ref|YP_003738053.1| - 0.065 12.8 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_6 PF00970.24 gi|300712240|ref|YP_003738054.1| - 1.4e-09 38.2 0.0 1.9e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain DUF4765 PF15962.5 gi|300712240|ref|YP_003738054.1| - 0.006 14.6 0.0 0.0072 14.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4765) FAD_binding_8 PF08022.12 gi|300712240|ref|YP_003738054.1| - 0.057 13.5 0.0 8.6 6.5 0.0 2.3 2 0 0 2 2 2 0 FAD-binding domain SKN1 PF03935.15 gi|300712240|ref|YP_003738054.1| - 0.12 10.8 0.1 4.1 5.7 0.0 2.0 2 0 0 2 2 2 0 Beta-glucan synthesis-associated protein (SKN1) PrpR_N PF06506.11 gi|300712240|ref|YP_003738054.1| - 0.16 11.6 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Propionate catabolism activator POR_N PF01855.19 gi|300712241|ref|YP_003738055.1| - 6.6e-60 202.7 0.4 1.1e-59 201.9 0.4 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|300712241|ref|YP_003738055.1| - 4.1e-39 134.5 0.1 1e-38 133.2 0.0 1.7 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.18 gi|300712241|ref|YP_003738055.1| - 1.2e-05 25.0 0.1 2.3e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFOR_II PF17147.4 gi|300712241|ref|YP_003738055.1| - 0.096 13.0 0.0 0.22 11.8 0.0 1.7 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_C PF02775.21 gi|300712242|ref|YP_003738056.1| - 8.8e-32 110.0 0.2 1.4e-31 109.3 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|300712242|ref|YP_003738056.1| - 6.7e-19 67.8 0.5 2.2e-18 66.2 0.3 1.9 2 0 0 2 2 2 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal FAD_oxidored PF12831.7 gi|300712243|ref|YP_003738057.1| - 6.7e-12 45.5 6.0 6.7e-12 45.5 6.0 1.9 2 1 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|300712243|ref|YP_003738057.1| - 1.3e-11 44.1 4.7 1.3e-08 34.2 0.0 2.2 1 1 1 2 2 2 2 Tryptophan halogenase DAO PF01266.24 gi|300712243|ref|YP_003738057.1| - 3.1e-09 36.9 7.9 1.3e-05 25.0 0.2 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|300712243|ref|YP_003738057.1| - 1.2e-07 31.2 0.1 1.7e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|300712243|ref|YP_003738057.1| - 3e-07 29.9 9.5 7.3e-05 22.0 4.4 2.9 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|300712243|ref|YP_003738057.1| - 1.1e-05 24.3 2.3 0.00014 20.7 0.9 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|300712243|ref|YP_003738057.1| - 0.00017 21.0 10.4 0.0016 17.7 10.4 2.4 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|300712243|ref|YP_003738057.1| - 0.00021 20.7 1.9 0.00021 20.7 1.9 2.4 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|300712243|ref|YP_003738057.1| - 0.00066 20.2 3.4 0.47 11.1 0.8 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|300712243|ref|YP_003738057.1| - 0.0034 17.6 1.8 0.011 15.9 0.4 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|300712243|ref|YP_003738057.1| - 0.0084 15.4 0.1 0.018 14.4 0.1 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|300712243|ref|YP_003738057.1| - 0.022 13.8 5.5 0.14 11.2 5.5 2.0 1 1 0 1 1 1 0 Lycopene cyclase protein Thi4 PF01946.17 gi|300712243|ref|YP_003738057.1| - 0.024 13.9 0.9 0.051 12.8 0.9 1.4 1 0 0 1 1 1 0 Thi4 family GMC_oxred_N PF00732.19 gi|300712243|ref|YP_003738057.1| - 0.038 13.4 0.1 4.7 6.5 0.1 2.3 2 0 0 2 2 2 0 GMC oxidoreductase 3HCDH_N PF02737.18 gi|300712243|ref|YP_003738057.1| - 0.34 10.8 1.2 0.72 9.7 0.4 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyoxalase_4 PF13669.6 gi|300712244|ref|YP_003738058.1| - 4.9e-17 62.2 0.1 5.8e-17 62.0 0.1 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|300712244|ref|YP_003738058.1| - 5e-08 33.3 0.9 5.4e-08 33.1 0.9 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|300712244|ref|YP_003738058.1| - 1.2e-07 31.9 0.2 1.4e-07 31.7 0.2 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mac PF12464.8 gi|300712245|ref|YP_003738059.1| - 1.3e-19 70.2 0.3 2.7e-19 69.1 0.3 1.5 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.24 gi|300712245|ref|YP_003738059.1| - 2e-10 40.0 5.9 4e-09 35.8 2.6 3.1 3 0 0 3 3 3 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|300712245|ref|YP_003738059.1| - 2.1e-09 37.0 8.7 4.1e-09 36.0 2.4 2.8 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase GTP_EFTU PF00009.27 gi|300712246|ref|YP_003738060.1| - 2.3e-64 216.5 0.9 3.8e-64 215.8 0.9 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|300712246|ref|YP_003738060.1| - 1.7e-24 85.6 0.1 3.5e-23 81.4 0.0 2.6 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_IV PF03764.18 gi|300712246|ref|YP_003738060.1| - 1e-23 83.4 0.0 3.2e-23 81.8 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|300712246|ref|YP_003738060.1| - 3.9e-22 78.1 0.4 3.9e-22 78.1 0.4 2.0 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|300712246|ref|YP_003738060.1| - 1.5e-16 60.5 0.6 8.3e-16 58.1 0.6 2.4 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|300712246|ref|YP_003738060.1| - 6.7e-05 22.9 0.4 0.00019 21.5 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|300712246|ref|YP_003738060.1| - 0.077 12.8 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain SRPRB PF09439.10 gi|300712246|ref|YP_003738060.1| - 0.15 11.5 0.1 0.44 10.0 0.1 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF4157 PF13699.6 gi|300712247|ref|YP_003738061.1| - 0.07 13.4 0.5 0.45 10.8 0.5 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4157) HTH_32 PF13565.6 gi|300712247|ref|YP_003738061.1| - 0.081 13.6 0.2 0.86 10.3 0.0 2.5 2 1 1 3 3 3 0 Homeodomain-like domain LPG_synthase_TM PF03706.13 gi|300712248|ref|YP_003738062.1| - 1.8e-41 142.7 32.3 2.3e-41 142.3 32.3 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_2 PF00535.26 gi|300712248|ref|YP_003738062.1| - 1.1e-28 100.1 0.0 1.7e-28 99.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|300712248|ref|YP_003738062.1| - 2.5e-10 40.6 0.0 5.8e-10 39.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|300712248|ref|YP_003738062.1| - 6.3e-05 22.6 0.0 9.3e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|300712248|ref|YP_003738062.1| - 0.077 13.5 0.0 0.15 12.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Amino_oxidase PF01593.24 gi|300712249|ref|YP_003738063.1| - 4.8e-36 125.0 0.1 1.1e-35 123.9 0.1 1.5 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|300712249|ref|YP_003738063.1| - 6.2e-15 55.2 0.2 2.2e-14 53.4 0.2 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|300712249|ref|YP_003738063.1| - 1.6e-10 41.2 3.9 7.8e-10 38.8 3.9 1.8 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|300712249|ref|YP_003738063.1| - 8.8e-06 25.2 0.3 0.00012 21.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|300712249|ref|YP_003738063.1| - 2.1e-05 24.1 0.3 0.00011 21.6 0.2 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|300712249|ref|YP_003738063.1| - 3.6e-05 23.0 2.2 3.6e-05 23.0 2.2 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.27 gi|300712249|ref|YP_003738063.1| - 7.5e-05 23.2 0.2 0.00042 20.8 0.2 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|300712249|ref|YP_003738063.1| - 0.00066 18.5 0.6 0.0013 17.5 0.4 1.5 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_9 PF13454.6 gi|300712249|ref|YP_003738063.1| - 0.00093 19.2 1.0 0.07 13.1 0.2 2.8 3 0 0 3 3 3 1 FAD-NAD(P)-binding GIDA PF01134.22 gi|300712249|ref|YP_003738063.1| - 0.0017 17.5 0.1 0.0027 16.9 0.1 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|300712249|ref|YP_003738063.1| - 0.0022 17.3 0.2 0.0022 17.3 0.2 1.9 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.19 gi|300712249|ref|YP_003738063.1| - 0.037 13.3 0.1 0.074 12.3 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain FMO-like PF00743.19 gi|300712249|ref|YP_003738063.1| - 0.038 12.4 0.0 0.057 11.8 0.0 1.2 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like AlaDh_PNT_C PF01262.21 gi|300712249|ref|YP_003738063.1| - 0.039 13.2 0.1 0.061 12.6 0.1 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|300712249|ref|YP_003738063.1| - 0.044 13.0 0.1 0.076 12.2 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|300712249|ref|YP_003738063.1| - 0.06 12.4 0.0 0.1 11.6 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|300712249|ref|YP_003738063.1| - 0.079 11.8 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase 3HCDH_N PF02737.18 gi|300712249|ref|YP_003738063.1| - 0.093 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MCRA PF06100.11 gi|300712249|ref|YP_003738063.1| - 0.15 10.8 0.1 0.27 10.0 0.1 1.3 1 0 0 1 1 1 0 MCRA family PMT_2 PF13231.6 gi|300712250|ref|YP_003738064.1| - 4.6e-09 36.7 11.4 4.6e-09 36.7 11.4 3.1 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PTPS_related PF10131.9 gi|300712250|ref|YP_003738064.1| - 0.018 13.4 21.2 0.027 12.8 21.2 1.2 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Ribosomal_S7 PF00177.21 gi|300712251|ref|YP_003738065.1| - 1.3e-35 122.2 1.4 1.6e-35 121.9 1.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e XRN1_D1 PF18332.1 gi|300712251|ref|YP_003738065.1| - 0.05 13.4 0.2 0.65 9.7 0.1 2.0 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D1 domain PBECR3 PF18812.1 gi|300712251|ref|YP_003738065.1| - 0.11 12.5 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Ribosom_S12_S23 PF00164.25 gi|300712252|ref|YP_003738066.1| - 1.9e-50 169.2 0.5 2.3e-50 169.0 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 PAP2_3 PF14378.6 gi|300712253|ref|YP_003738067.1| - 8e-20 71.3 18.3 8e-20 71.3 18.3 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2 PF01569.21 gi|300712253|ref|YP_003738067.1| - 7.6e-13 48.4 9.6 7.6e-13 48.4 9.6 2.5 2 1 1 3 3 3 1 PAP2 superfamily KH_2 PF07650.17 gi|300712254|ref|YP_003738068.1| - 2e-14 53.2 0.0 1.9e-08 34.0 0.0 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|300712254|ref|YP_003738068.1| - 2e-11 43.8 0.0 3.1e-10 40.0 0.0 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.29 gi|300712254|ref|YP_003738068.1| - 1.8e-05 24.5 0.1 0.00074 19.3 0.0 2.3 1 1 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|300712254|ref|YP_003738068.1| - 3e-05 23.8 0.0 0.012 15.5 0.0 2.2 2 0 0 2 2 2 2 KH domain RNA_pol_Rpb1_5 PF04998.17 gi|300712255|ref|YP_003738069.1| - 3.6e-55 187.3 0.2 4.6e-55 186.9 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 HHH_4 PF14490.6 gi|300712255|ref|YP_003738069.1| - 0.11 12.5 0.0 4.5 7.3 0.0 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix containing domain RNA_pol_Rpb1_1 PF04997.12 gi|300712256|ref|YP_003738070.1| - 9.2e-110 366.8 0.0 1.5e-109 366.1 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|300712256|ref|YP_003738070.1| - 3.1e-67 225.9 0.1 5.6e-67 225.1 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|300712256|ref|YP_003738070.1| - 1.9e-32 111.4 0.0 3.9e-32 110.4 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|300712256|ref|YP_003738070.1| - 3.3e-27 95.3 0.0 5.8e-27 94.5 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|300712256|ref|YP_003738070.1| - 2.3e-26 92.8 0.0 4.2e-26 92.0 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 HTH_3 PF01381.22 gi|300712256|ref|YP_003738070.1| - 0.00048 20.1 0.0 0.0012 18.8 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix RNA_pol_Rpb2_6 PF00562.28 gi|300712257|ref|YP_003738071.1| - 7.1e-127 423.7 0.0 9.2e-127 423.3 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|300712257|ref|YP_003738071.1| - 9.1e-30 102.9 1.7 1.1e-29 102.7 0.2 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|300712257|ref|YP_003738071.1| - 5.1e-22 77.9 0.3 1.1e-21 76.9 0.3 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|300712257|ref|YP_003738071.1| - 1.5e-06 28.6 8.0 7.8e-06 26.4 8.0 2.3 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 5 NOB1_Zn_bind PF08772.11 gi|300712257|ref|YP_003738071.1| - 0.0069 16.5 0.1 0.013 15.6 0.1 1.4 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like OrfB_Zn_ribbon PF07282.11 gi|300712257|ref|YP_003738071.1| - 0.0074 16.2 1.6 0.015 15.2 1.6 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DUF2318 PF10080.9 gi|300712257|ref|YP_003738071.1| - 0.063 13.4 0.4 0.13 12.4 0.4 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DZR PF12773.7 gi|300712257|ref|YP_003738071.1| - 0.13 12.3 0.6 0.24 11.4 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon Auto_anti-p27 PF06677.12 gi|300712257|ref|YP_003738071.1| - 0.18 12.0 2.6 0.32 11.2 2.6 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_2 PF13240.6 gi|300712257|ref|YP_003738071.1| - 0.34 10.7 4.3 1.3 8.9 4.3 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|300712257|ref|YP_003738071.1| - 0.47 9.9 3.2 1.3 8.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|300712257|ref|YP_003738071.1| - 2.1 7.9 5.2 8.9 5.9 0.7 2.2 1 1 2 3 3 3 0 TFIIB zinc-binding RNA_pol_Rpb2_1 PF04563.15 gi|300712258|ref|YP_003738072.1| - 2.6e-49 167.5 0.1 3.1e-49 167.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|300712258|ref|YP_003738072.1| - 5.5e-26 91.4 0.1 8.3e-26 90.8 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|300712258|ref|YP_003738072.1| - 1.2e-24 86.3 0.0 2.4e-24 85.3 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb5_C PF01191.19 gi|300712259|ref|YP_003738073.1| - 4.8e-18 64.8 0.3 5.4e-18 64.6 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain DUF2853 PF11015.8 gi|300712259|ref|YP_003738073.1| - 0.0065 17.1 0.1 0.0084 16.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2853) Rhodanese PF00581.20 gi|300712260|ref|YP_003738074.1| - 1.7e-07 31.7 0.0 2.2e-07 31.3 0.0 1.3 1 1 0 1 1 1 1 Rhodanese-like domain PCMT PF01135.19 gi|300712262|ref|YP_003738076.1| - 1.3e-37 129.7 0.0 1.6e-37 129.3 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|300712262|ref|YP_003738076.1| - 8.7e-06 25.4 0.0 1.5e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|300712262|ref|YP_003738076.1| - 1.9e-05 25.3 0.0 4.1e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300712262|ref|YP_003738076.1| - 5.3e-05 23.1 0.0 7.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|300712262|ref|YP_003738076.1| - 0.0089 16.7 0.0 0.019 15.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|300712262|ref|YP_003738076.1| - 0.012 15.1 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|300712262|ref|YP_003738076.1| - 0.031 14.0 0.0 0.044 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 RrnaAD PF00398.20 gi|300712262|ref|YP_003738076.1| - 0.066 12.3 0.0 0.094 11.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.12 gi|300712262|ref|YP_003738076.1| - 0.085 13.6 0.0 0.18 12.6 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|300712262|ref|YP_003738076.1| - 0.15 11.7 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DUF5518 PF17647.1 gi|300712263|ref|YP_003738077.1| - 7.6e-15 55.1 31.0 8.6e-15 54.9 31.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5518) PCMT PF01135.19 gi|300712264|ref|YP_003738078.1| - 1.3e-59 201.5 0.0 1.5e-59 201.3 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|300712264|ref|YP_003738078.1| - 1.4e-07 32.1 0.0 2.3e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300712264|ref|YP_003738078.1| - 4.3e-05 23.3 0.0 5.9e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|300712264|ref|YP_003738078.1| - 0.00078 18.8 0.0 0.0011 18.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 gi|300712264|ref|YP_003738078.1| - 0.0047 16.6 0.0 0.0057 16.4 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|300712264|ref|YP_003738078.1| - 0.012 15.2 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain Fibrillarin PF01269.17 gi|300712264|ref|YP_003738078.1| - 0.013 14.6 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Methyltransf_18 PF12847.7 gi|300712264|ref|YP_003738078.1| - 0.017 15.1 0.0 0.032 14.2 0.0 1.4 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_3 PF01596.17 gi|300712264|ref|YP_003738078.1| - 0.019 14.1 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase RrnaAD PF00398.20 gi|300712264|ref|YP_003738078.1| - 0.022 13.8 0.0 0.043 12.9 0.0 1.4 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase DUF938 PF06080.12 gi|300712264|ref|YP_003738078.1| - 0.031 14.0 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_23 PF13489.6 gi|300712264|ref|YP_003738078.1| - 0.05 13.4 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|300712264|ref|YP_003738078.1| - 0.094 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|300712264|ref|YP_003738078.1| - 0.13 12.2 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF2387 PF09526.10 gi|300712265|ref|YP_003738079.1| - 0.00061 19.9 0.7 0.0014 18.7 0.7 1.6 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) Elf1 PF05129.13 gi|300712265|ref|YP_003738079.1| - 0.00064 19.7 0.9 0.0011 18.9 0.9 1.3 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like DUF5627 PF18620.1 gi|300712265|ref|YP_003738079.1| - 0.0082 16.0 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5627) Lar_restr_allev PF14354.6 gi|300712265|ref|YP_003738079.1| - 0.028 14.8 0.8 0.064 13.6 0.8 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.6 gi|300712265|ref|YP_003738079.1| - 0.032 14.2 4.3 0.092 12.7 4.3 1.8 1 1 0 1 1 1 0 zinc-ribbon domain zf-LITAF-like PF10601.9 gi|300712265|ref|YP_003738079.1| - 0.075 13.3 3.0 1.5 9.1 0.2 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zf-NADH-PPase PF09297.11 gi|300712265|ref|YP_003738079.1| - 0.095 12.4 1.4 9 6.1 0.2 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.6 gi|300712265|ref|YP_003738079.1| - 2.5 8.1 6.3 3.4 7.7 0.7 2.8 1 1 0 2 2 2 0 Nudix N-terminal Peptidase_M29 PF02073.15 gi|300712266|ref|YP_003738080.1| - 2.7e-10 39.6 0.1 6.2e-10 38.4 0.0 1.5 2 0 0 2 2 2 1 Thermophilic metalloprotease (M29) DUF3955 PF13127.6 gi|300712266|ref|YP_003738080.1| - 0.12 12.2 0.0 13 5.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3955) Na_Ca_ex PF01699.24 gi|300712267|ref|YP_003738081.1| - 7.4e-44 149.3 32.9 1.1e-23 83.9 16.4 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein HTH_AsnC-type PF13404.6 gi|300712267|ref|YP_003738081.1| - 0.2 11.5 1.6 4.7 7.1 0.1 2.7 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|300712267|ref|YP_003738081.1| - 0.32 10.9 2.1 6.1 6.8 0.1 2.4 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT PGK PF00162.19 gi|300712268|ref|YP_003738082.1| - 7.4e-100 334.5 0.0 8.6e-100 334.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Gp_dh_C PF02800.20 gi|300712269|ref|YP_003738083.1| - 7.4e-63 210.9 0.0 1e-62 210.4 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 gi|300712269|ref|YP_003738083.1| - 7.4e-32 109.7 0.0 1.7e-31 108.5 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|300712269|ref|YP_003738083.1| - 0.0073 16.4 0.2 0.028 14.5 0.1 2.0 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus ADH_zinc_N PF00107.26 gi|300712269|ref|YP_003738083.1| - 0.051 13.5 0.0 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Gp_dh_C PF02800.20 gi|300712270|ref|YP_003738084.1| - 1.4e-19 70.2 0.0 2e-19 69.7 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|300712270|ref|YP_003738084.1| - 8.7e-08 32.3 0.0 1.9e-07 31.2 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|300712270|ref|YP_003738084.1| - 2e-05 24.9 0.0 7.5e-05 23.0 0.0 2.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|300712270|ref|YP_003738084.1| - 0.0032 16.9 0.2 0.027 13.8 0.2 2.2 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|300712270|ref|YP_003738084.1| - 0.014 16.0 0.3 0.15 12.7 0.1 2.7 3 1 0 3 3 3 0 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|300712270|ref|YP_003738084.1| - 0.029 14.8 0.0 0.069 13.6 0.0 1.6 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain ArsA_HSP20 PF17886.1 gi|300712271|ref|YP_003738085.1| - 6.4e-16 57.7 0.0 8.6e-16 57.3 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|300712271|ref|YP_003738085.1| - 3.9e-09 36.6 0.0 8.5e-08 32.3 0.0 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family GvpH PF05455.11 gi|300712271|ref|YP_003738085.1| - 6.6e-05 23.0 0.2 8.3e-05 22.7 0.2 1.1 1 0 0 1 1 1 1 GvpH EB_dh PF09459.10 gi|300712271|ref|YP_003738085.1| - 0.17 11.9 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase DUF393 PF04134.12 gi|300712272|ref|YP_003738086.1| - 2.6e-07 32.0 0.0 3.3e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF393 Ferritin PF00210.24 gi|300712273|ref|YP_003738087.1| - 1.3e-16 60.8 0.3 2.5e-16 59.9 0.1 1.4 1 1 1 2 2 2 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|300712273|ref|YP_003738087.1| - 0.0094 16.3 1.4 0.032 14.6 1.2 2.1 1 1 1 2 2 2 2 Rubrerythrin RimK PF08443.11 gi|300712274|ref|YP_003738088.1| - 4.4e-20 72.1 0.0 5.5e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|300712274|ref|YP_003738088.1| - 1.1e-09 37.9 0.0 1.7e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|300712274|ref|YP_003738088.1| - 8.9e-08 31.7 0.0 3.3e-05 23.3 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|300712274|ref|YP_003738088.1| - 9.5e-07 29.0 0.0 1.3e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain TTL PF03133.15 gi|300712274|ref|YP_003738088.1| - 0.0068 15.6 0.0 0.032 13.4 0.0 1.9 3 0 0 3 3 3 1 Tubulin-tyrosine ligase family ATPgrasp_TupA PF14305.6 gi|300712274|ref|YP_003738088.1| - 0.028 14.2 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 TupA-like ATPgrasp CPSase_L_D2 PF02786.17 gi|300712274|ref|YP_003738088.1| - 0.028 13.9 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Prim-Pol PF09250.11 gi|300712274|ref|YP_003738088.1| - 0.048 14.0 0.0 0.076 13.4 0.0 1.5 1 1 0 1 1 1 0 Bifunctional DNA primase/polymerase, N-terminal YdjM PF04307.14 gi|300712275|ref|YP_003738089.1| - 0.00021 20.6 14.5 0.00097 18.5 12.0 2.4 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Ribosomal_L16 PF00252.18 gi|300712276|ref|YP_003738090.1| - 6.2e-29 100.7 0.0 7.3e-29 100.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e VanZ PF04892.12 gi|300712277|ref|YP_003738091.1| - 2.7e-06 28.0 0.4 4.1e-06 27.5 0.4 1.2 1 0 0 1 1 1 1 VanZ like family CarboxypepD_reg PF13620.6 gi|300712278|ref|YP_003738092.1| - 5.6e-10 39.4 33.2 1.3e-07 31.7 3.2 6.6 5 1 1 6 6 6 2 Carboxypeptidase regulatory-like domain PGF-CTERM PF18204.1 gi|300712278|ref|YP_003738092.1| - 1e-06 28.5 1.9 1.7e-06 27.8 1.9 1.3 1 0 0 1 1 1 1 PGF-CTERM motif Big_1 PF02369.16 gi|300712278|ref|YP_003738092.1| - 0.0001 22.3 4.0 0.0001 22.3 4.0 7.6 7 2 1 8 8 8 2 Bacterial Ig-like domain (group 1) PEGA PF08308.11 gi|300712278|ref|YP_003738092.1| - 0.0012 18.6 0.1 0.013 15.4 0.0 2.9 2 0 0 2 2 2 1 PEGA domain MG4 PF17789.1 gi|300712278|ref|YP_003738092.1| - 0.0049 17.0 10.6 0.18 12.0 0.1 5.0 4 0 0 4 4 4 1 Macroglobulin domain MG4 Myosin_N PF02736.19 gi|300712278|ref|YP_003738092.1| - 0.15 12.0 0.2 0.15 12.0 0.2 5.5 7 0 0 7 7 7 0 Myosin N-terminal SH3-like domain PAXNEB PF05625.11 gi|300712281|ref|YP_003738095.1| - 0.0033 16.6 0.0 0.0048 16.1 0.0 1.2 1 0 0 1 1 1 1 PAXNEB protein GATase_7 PF13537.6 gi|300712284|ref|YP_003738098.1| - 9.9e-10 38.4 0.0 2.2e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain Asn_synthase PF00733.21 gi|300712284|ref|YP_003738098.1| - 2.5e-08 34.0 0.6 5e-07 29.7 0.6 2.7 1 1 0 1 1 1 1 Asparagine synthase GATase_6 PF13522.6 gi|300712284|ref|YP_003738098.1| - 3.7e-06 27.2 0.0 1.8e-05 24.9 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain DUF3700 PF12481.8 gi|300712284|ref|YP_003738098.1| - 0.2 11.1 0.0 0.32 10.4 0.0 1.2 1 0 0 1 1 1 0 Aluminium induced protein Acetyltransf_6 PF13480.7 gi|300712285|ref|YP_003738099.1| - 8.8e-15 55.1 1.5 2.7e-14 53.5 0.0 2.4 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|300712285|ref|YP_003738099.1| - 5.8e-07 28.7 0.0 0.028 13.3 0.0 2.4 2 0 0 2 2 2 2 FemAB family DegT_DnrJ_EryC1 PF01041.17 gi|300712286|ref|YP_003738100.1| - 3.7e-14 52.8 0.0 7.3e-14 51.8 0.0 1.4 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|300712286|ref|YP_003738100.1| - 0.015 14.5 0.0 0.022 13.9 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II DUF192 PF02643.15 gi|300712287|ref|YP_003738101.1| - 3.8e-29 100.7 0.0 4.9e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Molydop_binding PF01568.21 gi|300712287|ref|YP_003738101.1| - 0.045 13.8 0.1 0.079 13.0 0.1 1.4 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain ABC_membrane PF00664.23 gi|300712288|ref|YP_003738102.1| - 8.9e-48 163.3 0.7 1.1e-47 163.0 0.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|300712288|ref|YP_003738102.1| - 2.2e-38 131.9 0.0 4.8e-38 130.8 0.0 1.6 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|300712288|ref|YP_003738102.1| - 0.00014 21.4 0.1 0.013 15.0 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|300712288|ref|YP_003738102.1| - 0.00029 21.1 0.1 0.0013 19.0 0.1 2.0 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|300712288|ref|YP_003738102.1| - 0.00048 19.5 0.0 0.0014 17.9 0.0 1.7 2 0 0 2 2 2 1 Zeta toxin RsgA_GTPase PF03193.16 gi|300712288|ref|YP_003738102.1| - 0.00062 19.7 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_21 PF13304.6 gi|300712288|ref|YP_003738102.1| - 0.0022 17.9 0.0 0.0038 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_24 PF13479.6 gi|300712288|ref|YP_003738102.1| - 0.0064 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|300712288|ref|YP_003738102.1| - 0.0076 16.6 0.2 0.021 15.2 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|300712288|ref|YP_003738102.1| - 0.012 15.3 0.0 0.037 13.8 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|300712288|ref|YP_003738102.1| - 0.015 15.0 0.2 0.039 13.7 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|300712288|ref|YP_003738102.1| - 0.028 14.8 0.0 0.18 12.2 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|300712288|ref|YP_003738102.1| - 0.031 14.4 0.0 0.077 13.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|300712288|ref|YP_003738102.1| - 0.033 14.7 0.0 0.068 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|300712288|ref|YP_003738102.1| - 0.053 13.5 0.1 1.5 8.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF2104 PF09877.9 gi|300712288|ref|YP_003738102.1| - 0.06 13.6 0.2 0.2 12.0 0.2 1.8 1 0 0 1 1 1 0 Predicted membrane protein (DUF2104) AAA_18 PF13238.6 gi|300712288|ref|YP_003738102.1| - 0.095 13.2 0.0 0.25 11.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|300712288|ref|YP_003738102.1| - 0.15 11.7 0.1 0.75 9.5 0.1 2.0 1 1 0 1 1 1 0 Guanylate kinase Creatininase PF02633.14 gi|300712290|ref|YP_003738104.1| - 2.1e-66 223.9 1.9 2.3e-66 223.7 1.9 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase T4SS PF07996.11 gi|300712291|ref|YP_003738105.1| - 0.0077 16.7 0.0 0.0095 16.4 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion system proteins TPR_MLP1_2 PF07926.12 gi|300712291|ref|YP_003738105.1| - 0.065 13.3 3.2 0.45 10.6 0.5 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Ead_Ea22 PF13935.6 gi|300712291|ref|YP_003738105.1| - 0.47 11.1 6.6 0.58 10.8 2.8 2.1 1 1 1 2 2 2 0 Ead/Ea22-like protein Drc1-Sld2 PF11719.8 gi|300712291|ref|YP_003738105.1| - 0.67 9.4 3.5 0.72 9.3 3.5 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DHNA PF04038.12 gi|300712292|ref|YP_003738106.1| - 5.2e-39 133.1 0.0 5.9e-39 132.9 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase eIF-5_eIF-2B PF01873.17 gi|300712293|ref|YP_003738107.1| - 6.1e-33 113.2 0.0 9.3e-33 112.6 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|300712293|ref|YP_003738107.1| - 4.4e-09 36.2 1.1 6.9e-09 35.6 1.1 1.3 1 0 0 1 1 1 1 TRAM domain zf-ribbon_3 PF13248.6 gi|300712293|ref|YP_003738107.1| - 0.017 14.5 0.5 5.6 6.5 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|300712293|ref|YP_003738107.1| - 0.019 14.7 0.4 1.4 8.6 0.0 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Lar_restr_allev PF14354.6 gi|300712293|ref|YP_003738107.1| - 0.064 13.6 0.3 0.64 10.4 0.3 2.2 1 1 0 1 1 1 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 gi|300712293|ref|YP_003738107.1| - 0.072 13.2 0.9 0.15 12.2 0.9 1.5 1 0 0 1 1 1 0 Zinc ribbon domain Nudix_N_2 PF14803.6 gi|300712293|ref|YP_003738107.1| - 0.083 12.8 2.2 0.2 11.6 2.2 1.6 1 0 0 1 1 1 0 Nudix N-terminal TF_Zn_Ribbon PF08271.12 gi|300712293|ref|YP_003738107.1| - 0.21 11.1 1.2 0.44 10.1 1.2 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 gi|300712293|ref|YP_003738107.1| - 1 9.3 3.8 29 4.7 3.8 2.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-CCHC_6 PF15288.6 gi|300712293|ref|YP_003738107.1| - 1.4 8.8 3.6 3.2 7.7 0.6 2.2 2 0 0 2 2 2 0 Zinc knuckle Epimerase PF01370.21 gi|300712294|ref|YP_003738108.1| - 9.7e-25 87.4 0.0 1.2e-24 87.1 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|300712294|ref|YP_003738108.1| - 9.2e-14 51.1 0.0 1.3e-13 50.6 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 gi|300712294|ref|YP_003738108.1| - 8.2e-12 45.4 0.0 1.7e-11 44.4 0.0 1.5 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 gi|300712294|ref|YP_003738108.1| - 1.4e-11 44.1 0.0 4.4e-11 42.5 0.0 1.7 2 0 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|300712294|ref|YP_003738108.1| - 3.1e-11 43.0 0.0 1.2e-08 34.4 0.0 2.6 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 gi|300712294|ref|YP_003738108.1| - 2e-09 37.3 0.0 7.7e-09 35.4 0.0 1.9 1 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 gi|300712294|ref|YP_003738108.1| - 0.00039 20.1 0.0 0.00063 19.4 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 gi|300712294|ref|YP_003738108.1| - 0.00088 18.4 0.0 0.0016 17.6 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 gi|300712294|ref|YP_003738108.1| - 0.0026 18.0 0.0 0.009 16.3 0.0 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DUF309 PF03745.14 gi|300712295|ref|YP_003738109.1| - 6.6e-19 67.3 3.2 1.1e-18 66.6 3.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF309) DUF1328 PF07043.13 gi|300712296|ref|YP_003738110.1| - 7.6e-14 51.6 18.2 9e-14 51.4 18.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) Sterol-sensing PF12349.8 gi|300712296|ref|YP_003738110.1| - 0.047 13.5 5.7 0.052 13.4 5.7 1.0 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation SecG PF03840.14 gi|300712296|ref|YP_003738110.1| - 6.4 6.9 13.8 7.8 6.7 3.0 2.1 1 1 1 2 2 2 0 Preprotein translocase SecG subunit Nramp PF01566.18 gi|300712298|ref|YP_003738112.1| - 5.8e-50 170.3 30.2 8.4e-50 169.7 30.2 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein TauE PF01925.19 gi|300712299|ref|YP_003738113.1| - 6.6e-31 107.8 43.4 7.5e-31 107.6 43.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Usp PF00582.26 gi|300712300|ref|YP_003738114.1| - 2.1e-33 115.8 0.6 2.3e-33 115.7 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF4347 PF14252.6 gi|300712300|ref|YP_003738114.1| - 0.21 11.5 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) tRNA_anti-codon PF01336.25 gi|300712301|ref|YP_003738115.1| - 3.8e-27 94.1 8.0 1.1e-11 44.5 0.2 4.0 4 0 0 4 4 4 3 OB-fold nucleic acid binding domain REPA_OB_2 PF16900.5 gi|300712301|ref|YP_003738115.1| - 1.2e-12 47.5 1.2 0.00027 20.8 0.2 3.2 3 0 0 3 3 3 3 Replication protein A OB domain CDC24_OB3 PF17244.2 gi|300712301|ref|YP_003738115.1| - 2e-11 44.0 0.0 0.027 14.2 0.0 3.1 3 0 0 3 3 3 3 Cell division control protein 24, OB domain 3 Rep_fac-A_C PF08646.10 gi|300712301|ref|YP_003738115.1| - 0.0026 17.5 0.0 4.6 7.0 0.0 3.2 3 0 0 3 3 3 1 Replication factor-A C terminal domain RMI2 PF16100.5 gi|300712301|ref|YP_003738115.1| - 0.14 12.0 0.1 11 5.9 0.0 2.8 3 0 0 3 3 3 0 RecQ-mediated genome instability protein 2 Aminotran_3 PF00202.21 gi|300712302|ref|YP_003738116.1| - 8.7e-83 278.2 0.0 1e-82 278.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.21 gi|300712302|ref|YP_003738116.1| - 0.066 12.5 0.0 0.16 11.2 0.0 1.5 1 1 0 1 1 1 0 Beta-eliminating lyase CBFD_NFYB_HMF PF00808.23 gi|300712303|ref|YP_003738117.1| - 2.7e-23 82.0 0.0 1e-12 48.1 0.0 2.0 2 0 0 2 2 2 2 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|300712303|ref|YP_003738117.1| - 2.3e-11 44.2 0.1 8.5e-07 29.4 0.1 2.0 2 0 0 2 2 2 2 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 gi|300712303|ref|YP_003738117.1| - 0.0012 19.2 0.2 0.013 15.9 0.3 2.0 2 0 0 2 2 2 1 CENP-S protein DUF1931 PF09123.11 gi|300712303|ref|YP_003738117.1| - 0.019 15.1 1.3 0.055 13.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1931) CENP-T_C PF15511.6 gi|300712303|ref|YP_003738117.1| - 0.03 14.4 0.1 0.074 13.2 0.1 1.6 2 0 0 2 2 2 0 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 gi|300712303|ref|YP_003738117.1| - 0.072 13.3 1.2 6.2 7.1 0.5 2.2 2 0 0 2 2 2 0 TATA box binding protein associated factor (TAF) Hist_deacetyl PF00850.19 gi|300712304|ref|YP_003738118.1| - 6.2e-81 272.2 0.0 8.8e-81 271.7 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain tRNA_NucTransf2 PF09249.11 gi|300712305|ref|YP_003738119.1| - 1.6e-40 137.8 0.0 2.4e-40 137.3 0.0 1.3 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|300712305|ref|YP_003738119.1| - 5.1e-15 55.6 0.0 9.1e-15 54.7 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|300712305|ref|YP_003738119.1| - 0.0033 17.6 0.0 0.046 13.9 0.0 2.2 1 1 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain TrkA_C PF02080.21 gi|300712306|ref|YP_003738120.1| - 4.7e-06 26.3 0.1 4.9e-06 26.3 0.1 1.0 1 0 0 1 1 1 1 TrkA-C domain SKG6 PF08693.10 gi|300712307|ref|YP_003738121.1| - 0.022 14.2 0.4 0.03 13.7 0.4 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain ETRAMP PF09716.10 gi|300712307|ref|YP_003738121.1| - 1.9 8.6 2.8 6.7 6.9 1.7 1.9 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) zinc-ribbons_6 PF07191.12 gi|300712308|ref|YP_003738122.1| - 0.058 13.4 0.3 0.072 13.1 0.3 1.2 1 0 0 1 1 1 0 zinc-ribbons peroxidase PF00141.23 gi|300712309|ref|YP_003738123.1| - 1.9e-88 296.0 0.0 1.4e-49 168.9 0.0 2.2 2 0 0 2 2 2 2 Peroxidase STI1 PF17830.1 gi|300712309|ref|YP_003738123.1| - 0.034 14.1 0.0 0.091 12.7 0.0 1.7 1 0 0 1 1 1 0 STI1 domain MatE PF01554.18 gi|300712310|ref|YP_003738124.1| - 2.6e-58 196.2 24.9 4.2e-31 107.8 11.2 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|300712310|ref|YP_003738124.1| - 5.4e-06 26.5 6.7 5.4e-06 26.5 6.7 5.0 4 3 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DUF373 PF04123.13 gi|300712310|ref|YP_003738124.1| - 0.41 10.0 2.8 0.92 8.9 2.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF373) MFS_1 PF07690.16 gi|300712311|ref|YP_003738125.1| - 7.2e-35 120.5 40.5 1.1e-34 119.9 40.5 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Fer2 PF00111.27 gi|300712311|ref|YP_003738125.1| - 7.2e-10 38.7 0.1 1.3e-09 37.9 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain PTR2 PF00854.21 gi|300712311|ref|YP_003738125.1| - 0.14 11.0 4.7 0.4 9.5 4.7 1.7 1 0 0 1 1 1 0 POT family PsbK PF02533.15 gi|300712311|ref|YP_003738125.1| - 0.15 12.2 9.1 0.08 13.1 3.5 2.4 2 0 0 2 2 2 0 Photosystem II 4 kDa reaction centre component LacY_symp PF01306.19 gi|300712311|ref|YP_003738125.1| - 2.5 6.8 5.5 5.4 5.7 0.1 2.1 1 1 1 2 2 2 0 LacY proton/sugar symporter DJ-1_PfpI PF01965.24 gi|300712312|ref|YP_003738126.1| - 1.8e-18 66.9 0.0 5.3e-18 65.4 0.0 1.8 1 1 0 1 1 1 1 DJ-1/PfpI family NAD_binding_2 PF03446.15 gi|300712313|ref|YP_003738127.1| - 3.4e-36 124.8 0.0 5e-36 124.3 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 6PGD PF00393.19 gi|300712313|ref|YP_003738127.1| - 2.9e-22 79.4 0.0 4.4e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain 3HCDH_N PF02737.18 gi|300712313|ref|YP_003738127.1| - 6.1e-06 26.2 0.0 8.7e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|300712313|ref|YP_003738127.1| - 7.2e-05 23.0 0.3 0.00015 22.0 0.0 1.7 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|300712313|ref|YP_003738127.1| - 0.00028 20.3 0.0 0.0004 19.8 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|300712313|ref|YP_003738127.1| - 0.00041 20.9 0.0 0.00067 20.2 0.0 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 gi|300712313|ref|YP_003738127.1| - 0.00062 20.0 0.0 0.043 14.1 0.0 2.6 1 1 1 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|300712313|ref|YP_003738127.1| - 0.0012 18.5 0.0 0.0022 17.6 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|300712313|ref|YP_003738127.1| - 0.046 13.4 0.1 0.092 12.4 0.1 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF4397 PF14344.6 gi|300712314|ref|YP_003738128.1| - 2e-37 128.6 2.5 1.4e-29 103.3 0.8 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4397) CarboxypepD_reg PF13620.6 gi|300712314|ref|YP_003738128.1| - 0.00073 19.8 2.2 1.1 9.6 0.3 3.2 2 1 0 2 2 2 2 Carboxypeptidase regulatory-like domain DUF4493 PF14900.6 gi|300712314|ref|YP_003738128.1| - 0.0063 16.4 0.7 1 9.1 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4493) TcfC PF16967.5 gi|300712314|ref|YP_003738128.1| - 0.011 15.2 0.2 4.7 6.8 0.0 2.8 2 1 0 2 2 2 0 E-set like domain DUF3324 PF11797.8 gi|300712314|ref|YP_003738128.1| - 0.023 14.7 0.0 0.065 13.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) AlgF PF11182.8 gi|300712314|ref|YP_003738128.1| - 0.045 13.5 0.0 0.088 12.6 0.0 1.5 1 0 0 1 1 1 0 Alginate O-acetyl transferase AlgF HTH_20 PF12840.7 gi|300712315|ref|YP_003738129.1| - 8.8e-10 38.5 0.1 1.4e-09 37.9 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|300712315|ref|YP_003738129.1| - 2.5e-09 36.8 0.0 3.1e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|300712315|ref|YP_003738129.1| - 1.6e-08 34.0 0.2 3.1e-08 33.0 0.2 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 gi|300712315|ref|YP_003738129.1| - 6.5e-05 22.6 0.2 0.00011 21.9 0.2 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_11 PF08279.12 gi|300712315|ref|YP_003738129.1| - 0.0001 22.1 0.0 0.00019 21.3 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_29 PF13551.6 gi|300712315|ref|YP_003738129.1| - 0.00023 21.1 0.2 0.00034 20.6 0.2 1.3 1 1 0 1 1 1 1 Winged helix-turn helix HTH_IclR PF09339.10 gi|300712315|ref|YP_003738129.1| - 0.00031 20.5 0.0 0.00048 19.9 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|300712315|ref|YP_003738129.1| - 0.00037 20.3 0.0 0.00051 19.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 gi|300712315|ref|YP_003738129.1| - 0.00037 20.6 0.2 0.00068 19.7 0.1 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|300712315|ref|YP_003738129.1| - 0.00042 20.2 0.0 0.00054 19.8 0.0 1.2 1 0 0 1 1 1 1 MarR family RP-C PF03428.13 gi|300712315|ref|YP_003738129.1| - 0.00092 18.9 0.9 0.007 16.0 0.2 2.0 1 1 1 2 2 2 1 Replication protein C N-terminal domain MarR PF01047.22 gi|300712315|ref|YP_003738129.1| - 0.0013 18.6 0.0 0.0017 18.2 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|300712315|ref|YP_003738129.1| - 0.0023 17.9 0.0 0.0031 17.4 0.0 1.4 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_45 PF14947.6 gi|300712315|ref|YP_003738129.1| - 0.0085 16.1 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_8 PF02954.19 gi|300712315|ref|YP_003738129.1| - 0.0098 15.7 0.2 0.016 14.9 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_23 PF13384.6 gi|300712315|ref|YP_003738129.1| - 0.011 15.5 0.1 0.021 14.6 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.12 gi|300712315|ref|YP_003738129.1| - 0.011 15.5 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain DUF2089 PF09862.9 gi|300712315|ref|YP_003738129.1| - 0.015 15.3 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) GerE PF00196.19 gi|300712315|ref|YP_003738129.1| - 0.017 14.6 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family GntR PF00392.21 gi|300712315|ref|YP_003738129.1| - 0.021 14.5 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_AsnC-type PF13404.6 gi|300712315|ref|YP_003738129.1| - 0.023 14.5 0.2 0.058 13.2 0.2 1.6 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain Dimerisation2 PF16864.5 gi|300712315|ref|YP_003738129.1| - 0.026 14.5 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 Dimerisation domain HTH_27 PF13463.6 gi|300712315|ref|YP_003738129.1| - 0.034 14.6 0.0 0.053 14.0 0.0 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|300712315|ref|YP_003738129.1| - 0.041 13.8 0.0 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|300712315|ref|YP_003738129.1| - 0.046 14.1 0.0 0.08 13.3 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator Penicillinase_R PF03965.16 gi|300712315|ref|YP_003738129.1| - 0.048 14.0 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor Replic_Relax PF13814.6 gi|300712315|ref|YP_003738129.1| - 0.05 13.7 0.4 0.059 13.4 0.4 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_38 PF13936.6 gi|300712315|ref|YP_003738129.1| - 0.059 13.1 0.4 0.094 12.5 0.4 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|300712315|ref|YP_003738129.1| - 0.12 12.0 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 TFIIE_alpha PF02002.17 gi|300712315|ref|YP_003738129.1| - 0.17 11.7 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit tRNA-synt_1 PF00133.22 gi|300712316|ref|YP_003738130.1| - 1.1e-134 450.0 0.1 1.7e-133 446.1 0.1 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|300712316|ref|YP_003738130.1| - 3.7e-36 124.4 0.0 1.1e-35 122.9 0.0 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|300712316|ref|YP_003738130.1| - 7.9e-22 77.5 0.4 1.2e-12 47.3 0.0 3.3 4 0 0 4 4 4 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|300712316|ref|YP_003738130.1| - 1.7e-05 24.4 0.0 9.2e-05 22.0 0.0 2.1 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|300712316|ref|YP_003738130.1| - 0.016 14.5 0.0 0.052 12.9 0.0 1.7 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain Zn-ribbon_8 PF09723.10 gi|300712316|ref|YP_003738130.1| - 0.021 14.9 4.1 0.052 13.7 0.6 2.7 3 0 0 3 3 3 0 Zinc ribbon domain Mut7-C PF01927.16 gi|300712316|ref|YP_003738130.1| - 0.051 13.7 0.2 0.72 9.9 0.0 2.6 3 0 0 3 3 3 0 Mut7-C RNAse domain tRNA-synt_1b PF00579.25 gi|300712316|ref|YP_003738130.1| - 0.094 12.0 0.0 0.91 8.8 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) tRNA-synt_1c PF00749.21 gi|300712316|ref|YP_003738130.1| - 0.14 11.0 0.0 3 6.7 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain CLTH PF10607.9 gi|300712316|ref|YP_003738130.1| - 0.17 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain Peptidase_M29 PF02073.15 gi|300712318|ref|YP_003738132.1| - 1e-57 195.8 0.0 1.3e-57 195.4 0.0 1.0 1 0 0 1 1 1 1 Thermophilic metalloprotease (M29) 3HCDH_RFF PF18321.1 gi|300712318|ref|YP_003738132.1| - 0.06 13.8 2.3 0.26 11.8 0.1 3.1 4 0 0 4 4 4 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Fe_dep_repr_C PF02742.15 gi|300712319|ref|YP_003738133.1| - 2.5e-27 94.8 1.4 1.3e-26 92.5 1.1 2.2 2 1 1 3 3 3 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|300712319|ref|YP_003738133.1| - 1e-18 67.3 0.4 2.5e-18 66.0 0.2 1.8 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|300712319|ref|YP_003738133.1| - 3.5e-18 65.6 0.6 1.8e-16 60.1 0.1 2.3 2 0 0 2 2 2 1 FeoA domain MarR_2 PF12802.7 gi|300712319|ref|YP_003738133.1| - 9.8e-08 31.8 0.1 3.6e-07 30.0 0.0 2.0 2 0 0 2 2 1 1 MarR family MarR PF01047.22 gi|300712319|ref|YP_003738133.1| - 2.1e-07 30.8 0.0 4.1e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|300712319|ref|YP_003738133.1| - 3e-07 30.3 0.0 7.6e-07 29.0 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|300712319|ref|YP_003738133.1| - 1.4e-05 24.8 0.1 0.00011 21.9 0.3 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|300712319|ref|YP_003738133.1| - 1.7e-05 24.3 0.0 9.9e-05 21.8 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|300712319|ref|YP_003738133.1| - 6.5e-05 23.2 0.0 0.00017 21.9 0.1 1.7 2 0 0 2 2 1 1 Transcriptional regulator GntR PF00392.21 gi|300712319|ref|YP_003738133.1| - 0.00011 21.7 1.0 0.00053 19.6 0.1 2.7 4 0 0 4 4 3 1 Bacterial regulatory proteins, gntR family HTH_1 PF00126.27 gi|300712319|ref|YP_003738133.1| - 0.00059 19.7 0.0 0.002 18.0 0.0 2.0 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_5 PF01022.20 gi|300712319|ref|YP_003738133.1| - 0.0017 18.2 0.1 0.0097 15.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Crp PF00325.20 gi|300712319|ref|YP_003738133.1| - 0.003 17.2 0.1 0.0084 15.7 0.0 1.8 2 0 0 2 2 1 1 Bacterial regulatory proteins, crp family TrmB PF01978.19 gi|300712319|ref|YP_003738133.1| - 0.0044 16.9 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|300712319|ref|YP_003738133.1| - 0.0051 16.9 0.0 0.014 15.5 0.1 1.8 2 0 0 2 2 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_27 PF13463.6 gi|300712319|ref|YP_003738133.1| - 0.0065 16.9 0.1 0.016 15.7 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|300712319|ref|YP_003738133.1| - 0.0069 16.2 0.0 0.039 13.8 0.0 2.1 2 0 0 2 2 2 1 HTH DNA binding domain Penicillinase_R PF03965.16 gi|300712319|ref|YP_003738133.1| - 0.019 15.3 0.0 0.038 14.3 0.0 1.6 1 1 0 1 1 1 0 Penicillinase repressor HTH_CodY PF08222.11 gi|300712319|ref|YP_003738133.1| - 0.02 14.4 0.0 0.038 13.5 0.0 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_20 PF12840.7 gi|300712319|ref|YP_003738133.1| - 0.027 14.5 0.1 0.11 12.6 0.1 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|300712319|ref|YP_003738133.1| - 0.027 14.6 0.1 0.27 11.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|300712319|ref|YP_003738133.1| - 0.033 14.0 0.0 0.094 12.5 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain FeoC PF09012.10 gi|300712319|ref|YP_003738133.1| - 0.04 14.0 0.0 0.12 12.5 0.0 1.8 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_DeoR PF08220.12 gi|300712319|ref|YP_003738133.1| - 0.044 13.5 0.0 0.22 11.3 0.0 2.1 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HxlR PF01638.17 gi|300712319|ref|YP_003738133.1| - 0.047 13.5 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_13 PF11972.8 gi|300712319|ref|YP_003738133.1| - 0.049 13.7 0.1 0.13 12.3 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain HrcA_DNA-bdg PF03444.15 gi|300712319|ref|YP_003738133.1| - 0.058 13.0 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FaeA PF04703.12 gi|300712319|ref|YP_003738133.1| - 0.06 13.7 0.0 0.18 12.2 0.0 1.8 1 0 0 1 1 1 0 FaeA-like protein HTH_37 PF13744.6 gi|300712319|ref|YP_003738133.1| - 0.066 13.2 0.0 0.16 11.9 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain Put_DNA-bind_N PF06971.13 gi|300712319|ref|YP_003738133.1| - 0.077 13.0 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus YdaS_antitoxin PF15943.5 gi|300712319|ref|YP_003738133.1| - 0.084 12.8 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Topoisom_bac PF01131.20 gi|300712319|ref|YP_003738133.1| - 0.14 11.2 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 DNA topoisomerase AMMECR1 PF01871.17 gi|300712320|ref|YP_003738134.1| - 8.2e-39 132.9 0.0 9.4e-39 132.7 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 QRPTase_C PF01729.19 gi|300712321|ref|YP_003738135.1| - 6.7e-14 52.0 0.0 1.3e-13 51.1 0.0 1.4 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_N PF17767.1 gi|300712321|ref|YP_003738135.1| - 0.0041 17.5 0.0 0.13 12.7 0.0 2.4 1 1 1 2 2 2 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain QRPTase_N PF02749.16 gi|300712321|ref|YP_003738135.1| - 0.044 13.9 0.0 0.15 12.1 0.0 1.9 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain DUF4162 PF13732.6 gi|300712321|ref|YP_003738135.1| - 0.08 13.7 0.0 0.25 12.1 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) Peptidase_M76 PF09768.9 gi|300712322|ref|YP_003738136.1| - 0.00045 20.0 0.0 0.00068 19.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase M76 family Peptidase_M78 PF06114.13 gi|300712322|ref|YP_003738136.1| - 0.056 13.4 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 IrrE N-terminal-like domain Isochorismatase PF00857.20 gi|300712323|ref|YP_003738137.1| - 3.1e-48 164.3 0.0 3.6e-48 164.0 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DUF4385 PF14328.6 gi|300712324|ref|YP_003738138.1| - 2.1e-59 199.8 4.5 2.4e-59 199.6 4.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4385) Prok-JAB PF14464.6 gi|300712325|ref|YP_003738139.1| - 7.2e-20 70.9 0.1 8.8e-20 70.6 0.1 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 gi|300712325|ref|YP_003738139.1| - 8.1e-07 29.0 0.0 1.1e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease RadC PF04002.15 gi|300712325|ref|YP_003738139.1| - 0.25 11.3 0.0 0.38 10.7 0.0 1.3 1 0 0 1 1 1 0 RadC-like JAB domain Rhodanese PF00581.20 gi|300712326|ref|YP_003738140.1| - 9e-18 64.8 0.0 1e-17 64.6 0.0 1.0 1 0 0 1 1 1 1 Rhodanese-like domain 4HBT PF03061.22 gi|300712327|ref|YP_003738141.1| - 6.5e-13 48.8 0.0 1e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|300712327|ref|YP_003738141.1| - 0.0015 18.7 0.0 0.0033 17.6 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 gi|300712327|ref|YP_003738141.1| - 0.15 12.3 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily Peptidase_M23 PF01551.22 gi|300712328|ref|YP_003738142.1| - 0.00066 19.8 0.0 0.0012 19.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M23 DUF4192 PF13830.6 gi|300712329|ref|YP_003738143.1| - 0.13 12.3 8.4 0.023 14.8 3.3 2.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4192) Amidohydro_1 PF01979.20 gi|300712330|ref|YP_003738144.1| - 1.4e-20 73.9 0.1 6.1e-20 71.8 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|300712330|ref|YP_003738144.1| - 8e-16 58.6 9.5 6.9e-09 35.7 4.4 3.0 1 1 1 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.21 gi|300712330|ref|YP_003738144.1| - 0.002 17.6 0.3 0.11 11.8 0.1 2.5 2 1 0 2 2 2 1 TatD related DNase Usp PF00582.26 gi|300712332|ref|YP_003738146.1| - 2.5e-13 50.7 0.9 4.7e-12 46.6 0.9 2.0 1 1 0 1 1 1 1 Universal stress protein family Acetyltransf_1 PF00583.25 gi|300712333|ref|YP_003738147.1| - 5e-18 65.4 0.0 6.8e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|300712333|ref|YP_003738147.1| - 1.3e-12 47.9 0.0 1.9e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300712333|ref|YP_003738147.1| - 2.1e-12 47.1 0.0 2.8e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|300712333|ref|YP_003738147.1| - 2.5e-08 34.7 0.0 3.3e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300712333|ref|YP_003738147.1| - 3.5e-06 26.9 0.0 5.7e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|300712333|ref|YP_003738147.1| - 0.00075 19.6 0.0 0.02 15.0 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|300712333|ref|YP_003738147.1| - 0.0019 18.4 0.0 0.0023 18.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|300712333|ref|YP_003738147.1| - 0.0065 16.2 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|300712333|ref|YP_003738147.1| - 0.0071 16.5 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.7 gi|300712333|ref|YP_003738147.1| - 0.022 14.9 0.8 0.029 14.5 0.8 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HCV_capsid PF01543.17 gi|300712333|ref|YP_003738147.1| - 0.15 12.2 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Hepatitis C virus capsid protein Usp PF00582.26 gi|300712334|ref|YP_003738148.1| - 2e-14 54.3 2.9 3.7e-14 53.4 2.9 1.4 1 1 0 1 1 1 1 Universal stress protein family Usp PF00582.26 gi|300712335|ref|YP_003738149.1| - 1e-32 113.6 2.5 1.2e-32 113.4 2.5 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|300712335|ref|YP_003738149.1| - 0.068 13.2 0.0 0.12 12.4 0.0 1.3 1 1 0 1 1 1 0 DNA photolyase DHH PF01368.20 gi|300712336|ref|YP_003738150.1| - 0.011 16.0 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 DHH family Acetyltransf_4 PF13420.7 gi|300712337|ref|YP_003738151.1| - 9.1e-30 103.8 0.0 1e-29 103.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|300712337|ref|YP_003738151.1| - 3.2e-14 53.2 0.0 4.6e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|300712337|ref|YP_003738151.1| - 2.4e-09 38.0 0.0 3.3e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|300712337|ref|YP_003738151.1| - 1.1e-08 35.3 0.0 1.8e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|300712337|ref|YP_003738151.1| - 9.7e-07 28.8 0.0 1.4e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|300712337|ref|YP_003738151.1| - 0.011 15.4 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_CG PF14542.6 gi|300712337|ref|YP_003738151.1| - 0.018 15.2 0.0 0.03 14.4 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.6 gi|300712337|ref|YP_003738151.1| - 0.044 13.5 0.2 0.08 12.6 0.1 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|300712337|ref|YP_003738151.1| - 0.069 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_9 PF13527.7 gi|300712337|ref|YP_003738151.1| - 0.13 12.4 0.1 0.25 11.4 0.1 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF2387 PF09526.10 gi|300712338|ref|YP_003738152.1| - 0.027 14.6 0.1 0.058 13.5 0.1 1.5 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) Ribosomal_S6e PF01092.19 gi|300712340|ref|YP_003738154.1| - 5.3e-42 142.7 0.0 6.1e-42 142.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e Lactamase_B PF00753.27 gi|300712341|ref|YP_003738155.1| - 6.3e-15 55.7 2.7 1.2e-14 54.8 2.7 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|300712341|ref|YP_003738155.1| - 1.1e-13 50.8 0.0 1.7e-12 47.1 0.0 2.2 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 gi|300712341|ref|YP_003738155.1| - 4e-13 49.6 0.0 7.1e-13 48.8 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B_2 PF12706.7 gi|300712341|ref|YP_003738155.1| - 1.8e-08 34.2 0.9 9.3e-08 31.8 0.5 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|300712341|ref|YP_003738155.1| - 0.00011 21.7 0.0 0.00021 20.8 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|300712341|ref|YP_003738155.1| - 0.00063 19.7 0.0 0.0028 17.6 0.0 2.0 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Flexi_CP_N PF08358.10 gi|300712341|ref|YP_003738155.1| - 0.11 12.5 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Carlavirus coat DUF4112 PF13430.6 gi|300712344|ref|YP_003738158.1| - 5.5e-30 103.7 0.2 6.9e-30 103.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4112) Ni_hydr_CYTB PF01292.20 gi|300712345|ref|YP_003738159.1| - 3e-18 66.1 18.4 7.8e-18 64.7 15.6 2.0 2 0 0 2 2 2 1 Prokaryotic cytochrome b561 UL41A PF17591.2 gi|300712345|ref|YP_003738159.1| - 0.44 10.7 0.0 0.44 10.7 0.0 3.5 4 1 0 4 4 4 0 Herpesvirus UL41A Rax2 PF12768.7 gi|300712346|ref|YP_003738160.1| - 0.096 12.1 0.3 1 8.8 0.1 1.9 2 0 0 2 2 2 0 Cortical protein marker for cell polarity MHYT PF03707.16 gi|300712346|ref|YP_003738160.1| - 0.22 11.7 4.5 2.6 8.3 0.2 2.2 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat DUF4328 PF14219.6 gi|300712346|ref|YP_003738160.1| - 1.2 8.7 8.3 0.14 11.7 0.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4328) Fer4_11 PF13247.6 gi|300712347|ref|YP_003738161.1| - 5.8e-16 58.4 11.8 5.8e-16 58.4 11.8 2.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|300712347|ref|YP_003738161.1| - 6.9e-16 58.6 22.3 1.2e-07 32.2 8.1 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300712347|ref|YP_003738161.1| - 4.2e-13 49.2 23.8 1.4e-06 28.3 7.1 3.2 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4 PF00037.27 gi|300712347|ref|YP_003738161.1| - 3e-09 36.3 41.7 2.7e-06 27.0 2.5 5.5 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|300712347|ref|YP_003738161.1| - 2.3e-08 34.0 25.7 3.9e-06 26.9 8.5 3.8 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300712347|ref|YP_003738161.1| - 2.9e-08 33.7 29.2 7.8e-05 22.7 9.3 3.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300712347|ref|YP_003738161.1| - 3.3e-08 33.3 40.5 4e-05 23.5 2.1 5.4 4 2 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|300712347|ref|YP_003738161.1| - 2.2e-07 31.7 20.8 0.023 15.6 1.5 4.6 4 1 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|300712347|ref|YP_003738161.1| - 4.1e-07 29.7 34.5 0.00042 20.2 1.3 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|300712347|ref|YP_003738161.1| - 9.4e-05 22.8 24.0 0.016 15.6 7.3 3.1 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|300712347|ref|YP_003738161.1| - 9.7e-05 23.1 40.8 0.029 15.3 4.0 4.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|300712347|ref|YP_003738161.1| - 0.00042 20.6 32.1 0.028 14.9 2.0 4.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|300712347|ref|YP_003738161.1| - 0.045 14.3 29.7 0.2 12.2 0.8 4.3 2 2 3 5 5 5 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|300712347|ref|YP_003738161.1| - 0.05 13.8 18.4 0.21 11.8 6.7 3.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|300712347|ref|YP_003738161.1| - 0.27 11.8 0.4 0.27 11.8 0.4 4.2 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|300712347|ref|YP_003738161.1| - 0.36 11.6 18.7 2.7 8.8 0.5 3.9 2 1 1 3 3 3 0 4Fe-4S single cluster domain Molybdopterin PF00384.22 gi|300712348|ref|YP_003738162.1| - 1.1e-51 176.2 7.6 2.3e-51 175.1 5.1 2.3 2 1 0 2 2 2 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 gi|300712348|ref|YP_003738162.1| - 3.1e-13 49.5 0.3 7.5e-13 48.3 0.3 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 gi|300712348|ref|YP_003738162.1| - 4.9e-13 49.1 0.0 1.7e-12 47.3 0.0 2.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain TAT_signal PF10518.9 gi|300712348|ref|YP_003738162.1| - 6.5e-05 22.6 4.5 0.00013 21.7 4.5 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Rieske_3 PF18465.1 gi|300712348|ref|YP_003738162.1| - 2.4 8.5 5.6 13 6.2 1.0 3.3 2 2 2 4 4 4 0 Rieske 3Fe-4S FlpD PF02662.16 gi|300712349|ref|YP_003738163.1| - 2.5e-25 88.9 0.0 6.7e-25 87.5 0.0 1.8 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4 PF00037.27 gi|300712349|ref|YP_003738163.1| - 6.7e-18 63.7 45.4 2e-06 27.4 1.4 7.3 7 0 0 7 7 7 6 4Fe-4S binding domain Fer4_16 PF13484.6 gi|300712349|ref|YP_003738163.1| - 9.9e-16 58.4 24.5 0.00025 21.9 0.4 6.8 6 0 0 6 6 6 3 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|300712349|ref|YP_003738163.1| - 1.1e-15 57.9 36.2 4e-07 30.5 11.9 6.1 4 2 3 7 7 7 5 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|300712349|ref|YP_003738163.1| - 1.5e-10 41.1 39.5 9.6e-06 25.7 9.7 5.4 7 0 0 7 7 7 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|300712349|ref|YP_003738163.1| - 2.6e-10 39.9 47.1 4.9e-05 23.2 1.2 7.2 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4_8 PF13183.6 gi|300712349|ref|YP_003738163.1| - 3.5e-09 37.0 22.9 0.0038 17.6 1.4 5.9 6 0 0 6 6 5 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|300712349|ref|YP_003738163.1| - 1.2e-07 31.7 34.5 0.029 14.5 9.3 5.9 4 2 1 5 5 5 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|300712349|ref|YP_003738163.1| - 8.3e-06 25.8 46.1 0.0023 18.0 14.5 5.4 3 3 1 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|300712349|ref|YP_003738163.1| - 0.00049 20.0 12.9 0.0027 17.7 0.9 7.1 9 0 0 9 9 7 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|300712349|ref|YP_003738163.1| - 0.013 16.0 40.2 0.02 15.4 0.2 6.4 6 1 2 8 8 6 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|300712349|ref|YP_003738163.1| - 0.051 14.1 1.4 0.035 14.6 4.9 7.7 10 0 0 10 10 7 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|300712349|ref|YP_003738163.1| - 0.66 10.2 25.1 0.52 10.5 0.5 5.0 3 2 1 4 4 4 0 4Fe-4S dicluster domain Nitrate_red_del PF02613.15 gi|300712350|ref|YP_003738164.1| - 2.7e-25 89.0 0.0 4.4e-25 88.3 0.0 1.3 1 0 0 1 1 1 1 Nitrate reductase delta subunit PSCyt2 PF07583.11 gi|300712350|ref|YP_003738164.1| - 0.048 13.6 0.0 0.089 12.7 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1549) R2K_3 PF14243.6 gi|300712350|ref|YP_003738164.1| - 0.074 13.0 0.1 0.24 11.4 0.0 1.7 1 1 1 2 2 2 0 ATP-grasp domain, R2K clade family 3 Renin_r PF07850.14 gi|300712351|ref|YP_003738165.1| - 0.28 11.8 0.7 0.91 10.2 0.1 1.8 2 0 0 2 2 2 0 Renin receptor-like protein AFOR_C PF01314.18 gi|300712355|ref|YP_003738169.1| - 3.6e-87 292.9 0.0 5.4e-87 292.3 0.0 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|300712355|ref|YP_003738169.1| - 6.8e-59 199.1 0.2 1e-58 198.5 0.2 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain APG6_N PF17675.1 gi|300712357|ref|YP_003738171.1| - 0.51 10.9 3.2 0.72 10.4 3.2 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Nop14 PF04147.12 gi|300712357|ref|YP_003738171.1| - 2.4 6.2 14.1 3 5.9 14.1 1.0 1 0 0 1 1 1 0 Nop14-like family Radical_SAM PF04055.21 gi|300712358|ref|YP_003738172.1| - 2.7e-21 76.7 0.8 2e-20 73.8 0.8 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|300712358|ref|YP_003738172.1| - 4.3e-13 49.4 0.0 1.2e-12 48.0 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|300712358|ref|YP_003738172.1| - 1.5e-10 41.5 0.0 3.7e-10 40.2 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain TP_methylase PF00590.20 gi|300712358|ref|YP_003738172.1| - 0.00092 19.2 0.5 0.0059 16.6 0.5 2.2 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases QueC PF06508.13 gi|300712359|ref|YP_003738173.1| - 7e-71 238.0 0.0 7.9e-71 237.9 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|300712359|ref|YP_003738173.1| - 0.00044 19.9 0.0 0.0009 18.9 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|300712359|ref|YP_003738173.1| - 0.00075 18.4 0.0 0.00092 18.1 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|300712359|ref|YP_003738173.1| - 0.0035 17.1 0.3 0.0049 16.6 0.3 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.17 gi|300712359|ref|YP_003738173.1| - 0.11 11.7 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 NAD synthase Glycos_transf_1 PF00534.20 gi|300712360|ref|YP_003738174.1| - 4.3e-28 98.0 0.0 1.1e-27 96.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|300712360|ref|YP_003738174.1| - 1.6e-23 83.6 0.0 4.8e-23 82.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|300712360|ref|YP_003738174.1| - 1.3e-10 41.5 0.6 3.1e-10 40.3 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|300712360|ref|YP_003738174.1| - 2.1e-08 34.8 25.7 1.2e-07 32.3 9.1 3.0 2 1 0 2 2 2 2 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|300712360|ref|YP_003738174.1| - 4.2e-08 33.4 8.6 4e-07 30.2 3.3 3.3 2 2 0 2 2 2 1 Glycosyltransferase Family 4 PTPS PF01242.19 gi|300712361|ref|YP_003738175.1| - 8.6e-23 80.6 0.0 9.5e-23 80.5 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF4164 PF13747.6 gi|300712361|ref|YP_003738175.1| - 0.017 15.4 1.0 0.025 14.9 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) HTH_5 PF01022.20 gi|300712362|ref|YP_003738176.1| - 0.0018 18.1 0.0 0.0026 17.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|300712362|ref|YP_003738176.1| - 0.059 13.7 0.0 0.081 13.3 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 gi|300712362|ref|YP_003738176.1| - 0.06 13.9 0.1 0.11 13.0 0.1 1.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|300712362|ref|YP_003738176.1| - 0.12 12.2 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit GCH_III PF05165.12 gi|300712363|ref|YP_003738177.1| - 1.7e-88 296.0 0.2 2.3e-88 295.6 0.2 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase III GGDEF_2 PF17853.1 gi|300712363|ref|YP_003738177.1| - 5.8e-05 23.3 0.1 0.11 12.7 0.0 2.2 2 0 0 2 2 2 2 GGDEF-like domain mCpol PF18182.1 gi|300712363|ref|YP_003738177.1| - 0.0014 19.0 0.0 0.94 9.8 0.0 2.2 2 0 0 2 2 2 2 minimal CRISPR polymerase domain Glyoxalase PF00903.25 gi|300712365|ref|YP_003738179.1| - 7.4e-13 48.8 0.0 1.9e-12 47.5 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|300712365|ref|YP_003738179.1| - 7.6e-05 22.9 0.0 0.00026 21.3 0.0 1.8 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 gi|300712365|ref|YP_003738179.1| - 0.0014 19.4 0.3 0.002 18.9 0.3 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|300712365|ref|YP_003738179.1| - 0.032 14.3 0.4 0.3 11.2 0.1 2.1 2 0 0 2 2 2 0 Glyoxalase-like domain Toprim_3 PF13362.6 gi|300712365|ref|YP_003738179.1| - 0.11 12.9 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Toprim domain Glyoxalase_2 PF12681.7 gi|300712365|ref|YP_003738179.1| - 0.19 11.6 0.0 1.2 9.0 0.0 2.0 2 0 0 2 2 2 0 Glyoxalase-like domain BAT PF15915.5 gi|300712366|ref|YP_003738180.1| - 1.8e-25 89.6 9.4 1.8e-25 89.6 9.4 3.4 4 1 0 4 4 3 1 GAF and HTH_10 associated domain PAS_4 PF08448.10 gi|300712366|ref|YP_003738180.1| - 4.2e-23 81.7 4.4 5.1e-13 49.2 0.5 4.7 3 1 0 3 3 3 2 PAS fold PAS_3 PF08447.12 gi|300712366|ref|YP_003738180.1| - 4.3e-20 71.8 0.6 2.3e-19 69.4 0.1 2.6 4 0 0 4 4 2 1 PAS fold HTH_10 PF04967.12 gi|300712366|ref|YP_003738180.1| - 7.1e-20 70.6 0.1 1.7e-19 69.4 0.1 1.7 1 0 0 1 1 1 1 HTH DNA binding domain PAS_9 PF13426.7 gi|300712366|ref|YP_003738180.1| - 2.1e-17 63.3 0.0 4.2e-11 43.0 0.0 3.4 3 1 0 3 3 3 2 PAS domain PAS PF00989.25 gi|300712366|ref|YP_003738180.1| - 7.2e-17 61.4 0.1 1.2e-10 41.4 0.0 3.8 4 0 0 4 4 4 2 PAS fold GAF_2 PF13185.6 gi|300712366|ref|YP_003738180.1| - 1.7e-16 60.7 7.2 1.6e-14 54.4 1.6 3.2 2 1 1 3 3 3 2 GAF domain PAS_8 PF13188.7 gi|300712366|ref|YP_003738180.1| - 5.3e-12 45.5 0.0 0.0002 21.3 0.0 3.0 2 0 0 2 2 2 2 PAS domain GAF_3 PF13492.6 gi|300712366|ref|YP_003738180.1| - 1.1e-06 29.0 0.1 0.00017 21.9 0.0 2.6 2 0 0 2 2 2 1 GAF domain GAF PF01590.26 gi|300712366|ref|YP_003738180.1| - 1.3e-06 29.1 0.0 2.5e-05 24.9 0.0 2.8 2 0 0 2 2 2 1 GAF domain MarR_2 PF12802.7 gi|300712366|ref|YP_003738180.1| - 0.00013 21.8 0.5 0.0038 17.1 0.1 2.8 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|300712366|ref|YP_003738180.1| - 0.00025 20.9 0.0 0.00056 19.8 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|300712366|ref|YP_003738180.1| - 0.002 17.6 0.0 0.0047 16.5 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PAS_7 PF12860.7 gi|300712366|ref|YP_003738180.1| - 0.0041 17.3 0.0 1.8 8.7 0.0 3.3 2 1 0 2 2 2 1 PAS fold HTH_IclR PF09339.10 gi|300712366|ref|YP_003738180.1| - 0.012 15.3 0.2 0.046 13.5 0.2 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|300712366|ref|YP_003738180.1| - 0.013 15.5 1.1 0.034 14.1 0.1 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|300712366|ref|YP_003738180.1| - 0.016 15.4 0.0 0.037 14.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase HTH_23 PF13384.6 gi|300712366|ref|YP_003738180.1| - 0.021 14.6 0.1 0.021 14.6 0.1 2.9 3 0 0 3 3 3 0 Homeodomain-like domain HTH_29 PF13551.6 gi|300712366|ref|YP_003738180.1| - 0.033 14.2 0.0 0.12 12.4 0.0 2.0 1 0 0 1 1 1 0 Winged helix-turn helix Sigma70_r4 PF04545.16 gi|300712366|ref|YP_003738180.1| - 0.034 13.7 0.2 0.13 11.8 0.2 2.0 1 0 0 1 1 1 0 Sigma-70, region 4 PAS_10 PF13596.6 gi|300712366|ref|YP_003738180.1| - 0.1 13.2 0.1 1.3 9.6 0.0 2.7 3 0 0 3 3 2 0 PAS domain HTH_AsnC-type PF13404.6 gi|300712366|ref|YP_003738180.1| - 0.12 12.2 3.3 0.75 9.7 0.5 2.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_AraC PF00165.23 gi|300712366|ref|YP_003738180.1| - 0.13 12.4 0.0 0.57 10.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 gi|300712366|ref|YP_003738180.1| - 0.99 9.7 5.6 2 8.7 0.2 3.5 3 1 0 3 3 2 0 Helix-turn-helix domain Peripla_BP_2 PF01497.18 gi|300712367|ref|YP_003738181.1| - 1.3e-19 70.7 0.0 1.8e-19 70.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein MFS_1 PF07690.16 gi|300712368|ref|YP_003738182.1| - 1.2e-44 152.7 50.9 1.1e-32 113.4 23.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|300712368|ref|YP_003738182.1| - 0.038 12.9 15.5 0.0092 14.9 5.2 2.9 1 1 0 2 2 2 0 MFS_1 like family MFS_5 PF05631.14 gi|300712368|ref|YP_003738182.1| - 0.16 10.9 10.8 2 7.3 0.2 3.2 2 1 1 3 3 3 0 Sugar-tranasporters, 12 TM OATP PF03137.20 gi|300712368|ref|YP_003738182.1| - 0.31 9.3 12.1 0.36 9.0 1.1 2.9 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family LacY_symp PF01306.19 gi|300712368|ref|YP_003738182.1| - 2.9 6.6 14.3 0.58 8.9 5.2 2.1 2 0 0 2 2 2 0 LacY proton/sugar symporter ThiS PF02597.20 gi|300712370|ref|YP_003738184.1| - 4.3e-07 30.5 0.0 3.3e-06 27.6 0.0 2.0 1 1 0 1 1 1 1 ThiS family HTH_10 PF04967.12 gi|300712371|ref|YP_003738185.1| - 3.9e-20 71.4 0.1 6.9e-20 70.6 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.7 gi|300712371|ref|YP_003738185.1| - 0.0017 18.2 0.1 0.0053 16.6 0.1 1.9 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|300712371|ref|YP_003738185.1| - 0.0017 18.1 1.5 0.0023 17.7 0.2 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain Sigma70_r4 PF04545.16 gi|300712371|ref|YP_003738185.1| - 0.0064 16.0 0.0 0.023 14.2 0.0 2.0 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|300712371|ref|YP_003738185.1| - 0.013 15.4 0.2 1.5 8.8 0.1 2.8 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|300712371|ref|YP_003738185.1| - 0.016 15.4 0.0 0.031 14.5 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_1_2 PF13022.6 gi|300712371|ref|YP_003738185.1| - 0.02 15.0 0.0 0.03 14.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase LacI PF00356.21 gi|300712371|ref|YP_003738185.1| - 0.037 13.8 0.3 0.49 10.2 0.1 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR PF01047.22 gi|300712371|ref|YP_003738185.1| - 0.045 13.7 0.0 0.097 12.6 0.0 1.5 1 0 0 1 1 1 0 MarR family Sigma70_r4_2 PF08281.12 gi|300712371|ref|YP_003738185.1| - 0.087 12.5 0.8 8.1 6.2 0.0 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 PuR_N PF09182.10 gi|300712371|ref|YP_003738185.1| - 0.1 12.5 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal HTH_AsnC-type PF13404.6 gi|300712371|ref|YP_003738185.1| - 0.13 12.1 1.0 0.32 10.9 0.2 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|300712371|ref|YP_003738185.1| - 0.15 11.8 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease DUF123 PF01986.16 gi|300712372|ref|YP_003738186.1| - 2.3e-31 108.1 0.0 2.8e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 DUF2061 PF09834.9 gi|300712373|ref|YP_003738187.1| - 0.0048 17.4 0.0 0.006 17.1 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2061) DUF4880 PF16220.5 gi|300712374|ref|YP_003738188.1| - 0.057 13.3 2.6 0.19 11.6 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4880) AAA_26 PF13500.6 gi|300712375|ref|YP_003738189.1| - 1.9e-33 116.0 0.0 2.6e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain DRTGG PF07085.12 gi|300712375|ref|YP_003738189.1| - 1.1e-27 95.9 0.1 5.3e-27 93.7 0.1 2.1 2 0 0 2 2 2 1 DRTGG domain CbiA PF01656.23 gi|300712375|ref|YP_003738189.1| - 5e-07 29.8 0.0 1.1e-06 28.8 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain IstB_IS21 PF01695.17 gi|300712375|ref|YP_003738189.1| - 0.011 15.5 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Hpr_kinase_N PF02603.16 gi|300712375|ref|YP_003738189.1| - 0.013 15.6 0.0 0.04 13.9 0.0 1.8 2 0 0 2 2 2 0 HPr Serine kinase N terminus DUF1611 PF07755.11 gi|300712375|ref|YP_003738189.1| - 0.073 12.3 0.9 0.2 10.9 0.4 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain PucR PF07905.11 gi|300712375|ref|YP_003738189.1| - 0.11 12.7 0.1 13 6.1 0.0 2.5 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family MobB PF03205.14 gi|300712375|ref|YP_003738189.1| - 0.13 12.1 0.4 6.4 6.7 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATP-grasp_5 PF13549.6 gi|300712376|ref|YP_003738190.1| - 6.5e-73 244.9 0.2 1e-72 244.2 0.2 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|300712376|ref|YP_003738190.1| - 2e-51 173.4 2.5 2.3e-51 173.2 0.5 2.2 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|300712376|ref|YP_003738190.1| - 1.7e-22 80.1 4.6 7.7e-22 78.0 0.3 3.7 4 0 0 4 4 4 1 CoA binding domain CoA_binding PF02629.19 gi|300712376|ref|YP_003738190.1| - 2.7e-10 40.8 2.7 1.5e-09 38.4 2.7 2.4 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|300712376|ref|YP_003738190.1| - 0.015 14.8 0.0 0.048 13.2 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain adh_short_C2 PF13561.6 gi|300712377|ref|YP_003738191.1| - 1.5e-47 162.1 0.3 4.1e-47 160.7 0.3 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|300712377|ref|YP_003738191.1| - 2e-44 151.4 0.1 2.5e-44 151.1 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|300712377|ref|YP_003738191.1| - 1.6e-11 44.5 0.1 2.2e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|300712377|ref|YP_003738191.1| - 0.00043 20.2 0.1 0.00058 19.8 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding PALP PF00291.25 gi|300712377|ref|YP_003738191.1| - 0.00052 19.5 0.2 0.00069 19.1 0.2 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Epimerase PF01370.21 gi|300712377|ref|YP_003738191.1| - 0.00069 19.2 0.2 0.0013 18.3 0.2 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 gi|300712377|ref|YP_003738191.1| - 0.0019 17.8 0.8 0.003 17.1 0.8 1.3 1 0 0 1 1 1 1 NmrA-like family DUF1776 PF08643.10 gi|300712377|ref|YP_003738191.1| - 0.05 13.0 0.0 0.18 11.2 0.0 1.8 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) GDP_Man_Dehyd PF16363.5 gi|300712377|ref|YP_003738191.1| - 0.076 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase DFP PF04127.15 gi|300712377|ref|YP_003738191.1| - 0.15 11.8 1.5 11 5.7 1.4 2.7 2 1 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Usp PF00582.26 gi|300712378|ref|YP_003738192.1| - 8.2e-21 75.0 1.9 9.9e-21 74.7 1.9 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF2171 PF09939.9 gi|300712379|ref|YP_003738193.1| - 1.3e-06 28.6 2.5 3.8e-06 27.1 2.5 1.8 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2171) ROK PF00480.20 gi|300712380|ref|YP_003738194.1| - 3.1e-45 154.9 0.1 3.6e-45 154.7 0.1 1.0 1 0 0 1 1 1 1 ROK family FGGY_N PF00370.21 gi|300712380|ref|YP_003738194.1| - 4.7e-05 23.1 0.0 0.00011 21.9 0.0 1.5 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain BcrAD_BadFG PF01869.20 gi|300712380|ref|YP_003738194.1| - 0.0017 17.9 0.3 0.0036 16.8 0.1 1.4 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family DUF5372 PF17342.2 gi|300712380|ref|YP_003738194.1| - 0.1 13.0 0.1 1.5 9.3 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5372) FtsA PF14450.6 gi|300712380|ref|YP_003738194.1| - 0.1 13.0 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Cell division protein FtsA NifU PF01106.17 gi|300712381|ref|YP_003738195.1| - 1.8e-09 37.6 0.1 2.6e-09 37.1 0.1 1.3 1 0 0 1 1 1 1 NifU-like domain SepF PF04472.12 gi|300712382|ref|YP_003738196.1| - 3.7e-14 52.7 2.1 4.9e-14 52.4 2.1 1.2 1 0 0 1 1 1 1 Cell division protein SepF Rx_N PF18052.1 gi|300712382|ref|YP_003738196.1| - 0.11 12.8 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Rx N-terminal domain TFIIIC_sub6 PF10419.9 gi|300712382|ref|YP_003738196.1| - 0.13 12.2 0.0 0.19 11.7 0.0 1.5 1 1 0 1 1 1 0 TFIIIC subunit triple barrel domain PUA PF01472.20 gi|300712383|ref|YP_003738197.1| - 1.7e-15 56.7 3.3 2.4e-15 56.2 3.3 1.2 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|300712383|ref|YP_003738197.1| - 0.043 14.1 0.1 0.061 13.6 0.1 1.2 1 0 0 1 1 1 0 UPF0113 PUA domain MukB_hinge PF16330.5 gi|300712383|ref|YP_003738197.1| - 0.16 11.7 0.1 0.84 9.3 0.0 2.0 2 0 0 2 2 2 0 MukB hinge domain zinc_ribbon_11 PF11682.8 gi|300712385|ref|YP_003738199.1| - 0.0072 16.3 0.6 0.0092 16.0 0.6 1.1 1 0 0 1 1 1 1 Probable zinc-ribbon Luciferase_3H PF10284.9 gi|300712385|ref|YP_003738199.1| - 0.058 13.6 0.0 0.081 13.1 0.0 1.3 1 0 0 1 1 1 0 Luciferase helical bundle domain RNB PF00773.19 gi|300712386|ref|YP_003738200.1| - 3.5e-80 269.8 0.0 7.3e-79 265.4 0.0 2.1 1 1 0 1 1 1 1 RNB domain Glyco_hydro_3_C PF01915.22 gi|300712388|ref|YP_003738202.1| - 7.3e-55 186.1 0.0 2.3e-54 184.4 0.0 1.8 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 gi|300712388|ref|YP_003738202.1| - 7.5e-55 186.5 0.0 1.1e-54 185.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Rhomboid PF01694.22 gi|300712390|ref|YP_003738204.1| - 3.2e-26 92.2 16.4 3.2e-26 92.2 16.4 1.7 1 1 1 2 2 2 1 Rhomboid family DUF1751 PF08551.10 gi|300712390|ref|YP_003738204.1| - 0.00062 20.3 3.4 0.00068 20.2 0.1 2.4 2 1 0 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) Ca_hom_mod PF14798.6 gi|300712390|ref|YP_003738204.1| - 1.1 8.2 2.4 2.5 7.2 0.1 2.1 2 0 0 2 2 2 0 Calcium homeostasis modulator Ribosomal_S10 PF00338.22 gi|300712391|ref|YP_003738205.1| - 1e-25 89.8 0.0 1.1e-25 89.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.27 gi|300712392|ref|YP_003738206.1| - 2.7e-57 193.5 0.0 3.3e-57 193.2 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|300712392|ref|YP_003738206.1| - 1.3e-36 125.3 0.1 2.9e-36 124.2 0.0 1.6 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|300712392|ref|YP_003738206.1| - 3.6e-15 56.1 3.5 2e-14 53.7 1.2 2.6 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|300712392|ref|YP_003738206.1| - 1.3e-06 28.4 0.1 1e-05 25.6 0.1 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|300712392|ref|YP_003738206.1| - 0.0021 17.9 0.6 0.0062 16.4 0.6 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 RsgA_GTPase PF03193.16 gi|300712392|ref|YP_003738206.1| - 0.0025 17.8 0.3 0.16 11.9 0.1 2.3 1 1 1 2 2 2 1 RsgA GTPase Gtr1_RagA PF04670.12 gi|300712392|ref|YP_003738206.1| - 0.015 14.7 0.0 0.1 11.9 0.0 2.0 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 gi|300712392|ref|YP_003738206.1| - 0.031 14.3 0.0 9.6 6.2 0.0 2.4 1 1 1 2 2 2 0 Dynamin family SRPRB PF09439.10 gi|300712392|ref|YP_003738206.1| - 0.034 13.6 0.0 0.98 8.8 0.0 2.2 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 gi|300712392|ref|YP_003738206.1| - 0.09 12.3 0.0 1.2 8.6 0.0 2.4 2 1 0 2 2 2 0 Ferrous iron transport protein B NTP_transf_3 PF12804.7 gi|300712392|ref|YP_003738206.1| - 0.14 12.5 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 MobA-like NTP transferase domain Septin PF00735.18 gi|300712392|ref|YP_003738206.1| - 0.17 11.2 0.0 0.36 10.0 0.0 1.5 1 1 0 1 1 1 0 Septin Virul_fac_BrkB PF03631.15 gi|300712393|ref|YP_003738207.1| - 4.2e-41 141.3 24.1 4.9e-41 141.1 24.1 1.0 1 0 0 1 1 1 1 Virulence factor BrkB Homoserine_dh PF00742.19 gi|300712394|ref|YP_003738208.1| - 2e-45 154.8 0.0 3.7e-45 154.0 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|300712394|ref|YP_003738208.1| - 3.1e-07 31.0 0.4 8.3e-07 29.7 0.2 1.8 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|300712394|ref|YP_003738208.1| - 1.6e-06 28.1 0.0 3.2e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.18 gi|300712394|ref|YP_003738208.1| - 0.0086 16.0 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|300712394|ref|YP_003738208.1| - 0.024 15.5 0.0 0.041 14.7 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.18 gi|300712394|ref|YP_003738208.1| - 0.042 14.1 0.1 0.22 11.8 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain PglD_N PF17836.1 gi|300712394|ref|YP_003738208.1| - 0.12 13.1 0.0 0.22 12.2 0.0 1.5 1 0 0 1 1 1 0 PglD N-terminal domain ACT PF01842.25 gi|300712395|ref|YP_003738209.1| - 6.1e-05 22.7 0.5 0.0053 16.5 0.0 2.7 2 1 1 3 3 3 2 ACT domain Proteasome PF00227.26 gi|300712396|ref|YP_003738210.1| - 6.3e-23 81.3 0.1 8.4e-23 80.8 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit EccE PF11203.8 gi|300712396|ref|YP_003738210.1| - 0.021 15.2 2.7 4.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE MazG PF03819.17 gi|300712397|ref|YP_003738211.1| - 1.1e-05 25.6 0.1 1.5e-05 25.1 0.1 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|300712397|ref|YP_003738211.1| - 0.0015 19.0 0.6 0.0019 18.6 0.6 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase DUF3375 PF11855.8 gi|300712397|ref|YP_003738211.1| - 0.021 13.7 0.0 0.027 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) MazG-like PF12643.7 gi|300712397|ref|YP_003738211.1| - 0.1 12.9 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 MazG-like family HTH_10 PF04967.12 gi|300712398|ref|YP_003738212.1| - 6.4e-14 51.5 0.0 1.1e-13 50.7 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300712398|ref|YP_003738212.1| - 8.6e-10 38.7 0.2 1.7e-09 37.7 0.1 1.5 1 1 1 2 2 2 1 GAF and HTH_10 associated domain HTH_AsnC-type PF13404.6 gi|300712398|ref|YP_003738212.1| - 0.0036 17.1 0.1 0.0081 16.0 0.1 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_10 PF04967.12 gi|300712400|ref|YP_003738214.1| - 6.6e-18 64.3 0.0 1.3e-17 63.4 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain BAT PF15915.5 gi|300712400|ref|YP_003738214.1| - 2.9e-08 33.8 0.0 4.3e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 GAF and HTH_10 associated domain HTH_AsnC-type PF13404.6 gi|300712400|ref|YP_003738214.1| - 0.0011 18.7 0.3 0.0048 16.7 0.3 1.9 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|300712400|ref|YP_003738214.1| - 0.003 17.1 0.1 0.0089 15.6 0.1 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|300712400|ref|YP_003738214.1| - 0.004 17.0 0.1 0.0083 16.0 0.1 1.6 1 0 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.12 gi|300712400|ref|YP_003738214.1| - 0.044 13.5 0.2 0.22 11.2 0.1 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_30 PF13556.6 gi|300712400|ref|YP_003738214.1| - 0.1 12.4 0.2 4 7.3 0.0 2.4 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Cys_Met_Meta_PP PF01053.20 gi|300712401|ref|YP_003738215.1| - 6.7e-134 446.2 0.0 7.6e-134 446.0 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|300712401|ref|YP_003738215.1| - 2.6e-09 36.7 0.0 3.6e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|300712401|ref|YP_003738215.1| - 3.2e-09 36.6 0.3 2e-07 30.7 0.4 2.1 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|300712401|ref|YP_003738215.1| - 0.00061 18.8 0.0 0.00097 18.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V SepSecS PF05889.13 gi|300712401|ref|YP_003738215.1| - 0.0054 15.5 0.0 0.007 15.1 0.0 1.2 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 gi|300712401|ref|YP_003738215.1| - 0.012 14.9 0.2 0.022 14.0 0.2 1.6 1 1 0 1 1 1 0 Beta-eliminating lyase Methyltransf_12 PF08242.12 gi|300712402|ref|YP_003738216.1| - 2.9e-05 24.7 0.0 0.00014 22.5 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|300712402|ref|YP_003738216.1| - 0.00011 22.8 0.0 0.00022 21.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|300712402|ref|YP_003738216.1| - 0.00012 21.9 0.0 0.00029 20.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain NUDIX PF00293.28 gi|300712402|ref|YP_003738216.1| - 0.097 12.7 4.7 2.4 8.2 0.4 2.9 3 0 0 3 3 3 0 NUDIX domain Methyltransf_3 PF01596.17 gi|300712402|ref|YP_003738216.1| - 0.15 11.2 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase ADH_zinc_N PF00107.26 gi|300712403|ref|YP_003738217.1| - 9.7e-11 41.8 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|300712403|ref|YP_003738217.1| - 2e-07 30.7 0.0 3e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N PF08240.12 gi|300712403|ref|YP_003738217.1| - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain CDP-OH_P_transf PF01066.21 gi|300712404|ref|YP_003738218.1| - 2.3e-07 31.5 1.2 2.3e-07 31.5 1.2 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Methyltransf_21 PF05050.12 gi|300712405|ref|YP_003738219.1| - 1.1e-14 54.9 0.0 1.4e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 gi|300712405|ref|YP_003738219.1| - 0.00018 21.3 0.0 0.00026 20.8 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein V_cholerae_RfbT PF05575.11 gi|300712405|ref|YP_003738219.1| - 0.00088 18.6 0.0 0.0013 18.1 0.0 1.2 1 0 0 1 1 1 1 Vibrio cholerae RfbT protein MTS PF05175.14 gi|300712405|ref|YP_003738219.1| - 0.0026 17.3 0.0 0.0039 16.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|300712405|ref|YP_003738219.1| - 0.0076 16.9 0.0 0.014 16.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|300712405|ref|YP_003738219.1| - 0.012 15.5 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|300712405|ref|YP_003738219.1| - 0.027 14.3 0.0 0.049 13.5 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|300712405|ref|YP_003738219.1| - 0.15 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_31 PF13847.6 gi|300712405|ref|YP_003738219.1| - 0.2 11.5 0.0 0.36 10.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halalkalicoccus_jeotgali_B3_uid50305/NC_014297.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halalkalicoccus_jeotgali_B3_uid50305/NC_014297.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halalkalicoccus_jeotgali_B3_uid50305/NC_014297.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Halalkalicoccus_jeotgali_B3_uid50305/NC_014297.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 12:24:29 2019 # [ok]