# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M50 PF02163.17 gi|518651361|ref|YP_008140881.1| - 5.8e-06 25.3 2.0 5.8e-05 22.1 0.1 2.1 2 0 0 2 2 2 2 Peptidase family M50 ABC2_membrane_4 PF12730.2 gi|518651361|ref|YP_008140881.1| - 2 7.5 15.3 4.8 6.2 10.6 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein TatC PF00902.13 gi|518651361|ref|YP_008140881.1| - 4.2 6.7 13.8 39 3.5 9.6 2.1 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DDE_Tnp_1 PF01609.16 gi|518651362|ref|YP_008140882.1| - 1.4e-29 103.1 0.3 2.4e-29 102.4 0.1 1.5 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518651362|ref|YP_008140882.1| - 1.7e-05 24.6 1.5 0.01 15.5 0.0 2.6 1 1 0 2 2 2 2 Transposase DDE domain HTH_26 PF13443.1 gi|518651362|ref|YP_008140882.1| - 0.11 12.7 0.6 0.37 11.0 0.0 2.2 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain CRISPR_Cas2 PF09827.4 gi|518651363|ref|YP_008140883.1| - 6.4e-19 67.8 1.6 7.7e-19 67.6 1.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 DUF2153 PF09921.4 gi|518651363|ref|YP_008140883.1| - 0.038 13.5 0.1 0.043 13.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2153) DUF3677 PF12432.3 gi|518651363|ref|YP_008140883.1| - 0.12 12.8 0.1 0.15 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) Cas_Cas1 PF01867.11 gi|518651364|ref|YP_008140884.1| - 1.4e-78 263.8 0.1 1.6e-78 263.6 0.1 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Cas_Cas4 PF01930.12 gi|518651365|ref|YP_008140885.1| - 4.3e-49 166.5 9.4 4.8e-49 166.3 6.5 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|518651365|ref|YP_008140885.1| - 0.0014 18.0 1.2 0.0025 17.2 0.8 1.6 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily PDDEXK_3 PF13366.1 gi|518651365|ref|YP_008140885.1| - 0.027 14.5 0.6 0.039 14.0 0.4 1.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily v110 PF01639.12 gi|518651365|ref|YP_008140885.1| - 1.2 8.6 7.6 1.1 8.8 1.0 2.3 2 0 0 2 2 2 0 Viral family 110 DEAD PF00270.24 gi|518651366|ref|YP_008140886.1| - 5.2e-15 55.3 0.3 2.2e-12 46.7 0.0 3.2 3 0 0 3 3 3 2 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518651366|ref|YP_008140886.1| - 1.4e-05 24.8 0.0 9.2e-05 22.2 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518651366|ref|YP_008140886.1| - 2.9e-05 24.0 0.0 2.9e-05 24.0 0.0 4.1 3 2 1 4 4 4 1 Type III restriction enzyme, res subunit Cas_Cas5d PF09704.5 gi|518651367|ref|YP_008140887.1| - 2.2e-09 37.2 0.0 2.7e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) LRR_1 PF00560.28 gi|518651367|ref|YP_008140887.1| - 0.89 9.8 3.6 44 4.6 0.1 3.5 2 1 1 3 3 3 0 Leucine Rich Repeat DevR PF01905.11 gi|518651368|ref|YP_008140888.1| - 1.7e-11 43.4 0.2 7.9e-11 41.3 0.0 1.9 1 1 1 2 2 2 1 CRISPR-associated negative auto-regulator DevR/Csa2 Cas_CXXC_CXXC PF09706.5 gi|518651369|ref|YP_008140889.1| - 3.2e-06 27.2 2.9 1.1e-05 25.4 2.0 2.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_CXXC_CXXC) Cas_Cas6 PF01881.11 gi|518651370|ref|YP_008140890.1| - 5.6e-21 75.3 5.9 5.6e-21 75.3 4.1 1.8 2 0 0 2 2 2 1 CRISPR associated protein Cas6 RAMPs PF03787.10 gi|518651370|ref|YP_008140890.1| - 0.00015 21.7 2.2 0.0002 21.2 1.5 1.2 1 0 0 1 1 1 1 RAMP superfamily UvrD-helicase PF00580.16 gi|518651371|ref|YP_008140891.1| - 2.9e-48 164.7 18.1 2.3e-26 92.8 0.0 3.5 2 2 1 3 3 3 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|518651371|ref|YP_008140891.1| - 5.4e-39 134.6 5.8 1.6e-23 83.7 0.0 3.2 3 1 1 4 4 4 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.2 gi|518651371|ref|YP_008140891.1| - 4.4e-25 88.5 0.4 1.4e-24 86.8 0.1 2.0 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily AAA_19 PF13245.1 gi|518651371|ref|YP_008140891.1| - 1e-09 37.9 0.0 1.9e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain UvrD_C_2 PF13538.1 gi|518651371|ref|YP_008140891.1| - 1.4e-09 38.0 0.4 3e-08 33.7 0.2 3.2 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain Cas_Cas4 PF01930.12 gi|518651371|ref|YP_008140891.1| - 1.1e-08 35.1 3.9 3.2e-08 33.6 2.7 1.8 1 0 0 1 1 1 1 Domain of unknown function DUF83 Viral_helicase1 PF01443.13 gi|518651371|ref|YP_008140891.1| - 5.2e-06 26.1 0.3 0.08 12.4 0.0 4.4 5 0 0 5 5 5 1 Viral (Superfamily 1) RNA helicase DUF2800 PF10926.3 gi|518651371|ref|YP_008140891.1| - 8.3e-06 25.1 0.1 1.7e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) AAA_30 PF13604.1 gi|518651371|ref|YP_008140891.1| - 6.5e-05 22.6 0.0 0.0023 17.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain Dna2 PF08696.6 gi|518651371|ref|YP_008140891.1| - 0.079 12.2 4.2 0.55 9.4 0.0 3.4 4 0 0 4 4 4 0 DNA replication factor Dna2 ResIII PF04851.10 gi|518651372|ref|YP_008140892.1| - 1.9e-20 73.5 0.3 1.9e-20 73.5 0.2 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|518651372|ref|YP_008140892.1| - 4.7e-11 42.4 0.2 1.4e-10 40.9 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518651372|ref|YP_008140892.1| - 1.8e-10 40.5 0.0 4.1e-10 39.3 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 gi|518651372|ref|YP_008140892.1| - 2.3e-08 33.1 0.1 6.4e-08 31.7 0.1 1.7 1 0 0 1 1 1 1 SNF2 family N-terminal domain PhoH PF02562.11 gi|518651372|ref|YP_008140892.1| - 0.02 14.0 0.0 0.079 12.1 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein SecA_DEAD PF07517.9 gi|518651372|ref|YP_008140892.1| - 0.043 13.1 0.0 0.19 10.9 0.0 2.0 1 1 0 1 1 1 0 SecA DEAD-like domain SMC_N PF02463.14 gi|518651374|ref|YP_008140894.1| - 4.9e-17 61.9 8.4 6.7e-17 61.4 5.8 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|518651374|ref|YP_008140894.1| - 3.8e-16 60.0 42.2 3.8e-16 60.0 29.3 4.1 2 2 1 3 3 2 1 AAA domain AAA_29 PF13555.1 gi|518651374|ref|YP_008140894.1| - 1.8e-05 24.1 0.1 3.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.7 gi|518651374|ref|YP_008140894.1| - 0.0023 17.5 0.0 0.0082 15.8 0.0 2.0 2 0 0 2 2 2 1 NACHT domain Reo_sigmaC PF04582.7 gi|518651374|ref|YP_008140894.1| - 0.01 15.0 5.0 0.23 10.6 0.3 2.3 2 0 0 2 2 2 0 Reovirus sigma C capsid protein Miro PF08477.8 gi|518651374|ref|YP_008140894.1| - 0.035 14.6 4.1 0.072 13.5 0.0 3.2 3 0 0 3 3 3 0 Miro-like protein AAA_19 PF13245.1 gi|518651374|ref|YP_008140894.1| - 0.045 13.4 0.0 0.082 12.6 0.0 1.3 1 0 0 1 1 1 0 Part of AAA domain AAA_13 PF13166.1 gi|518651374|ref|YP_008140894.1| - 0.046 12.1 63.9 0.036 12.5 10.0 3.7 3 1 0 3 3 3 0 AAA domain Tropomyosin PF00261.15 gi|518651374|ref|YP_008140894.1| - 0.049 12.7 20.8 0.15 11.1 4.3 3.5 2 1 1 3 3 3 0 Tropomyosin FtsK_SpoIIIE PF01580.13 gi|518651374|ref|YP_008140894.1| - 0.064 12.7 0.0 0.18 11.2 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_22 PF13401.1 gi|518651374|ref|YP_008140894.1| - 0.085 13.0 0.6 0.75 9.9 0.0 2.9 3 1 0 3 3 3 0 AAA domain FliJ PF02050.11 gi|518651374|ref|YP_008140894.1| - 0.11 12.6 15.9 0.12 12.4 1.9 3.3 2 2 1 3 3 3 0 Flagellar FliJ protein AAA_21 PF13304.1 gi|518651374|ref|YP_008140894.1| - 0.35 10.7 54.2 0.019 14.9 14.7 3.3 1 1 2 3 3 3 0 AAA domain VASP_tetra PF08776.6 gi|518651374|ref|YP_008140894.1| - 3.1 7.1 9.8 1.4 8.3 0.2 3.7 3 0 0 3 3 3 0 VASP tetramerisation domain UpxZ PF06603.6 gi|518651375|ref|YP_008140895.1| - 0.061 13.3 0.0 0.095 12.7 0.0 1.4 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists Bac_DNA_binding PF00216.16 gi|518651379|ref|YP_008140899.1| - 0.21 11.6 4.6 3.7 7.6 0.0 3.2 2 1 1 3 3 3 0 Bacterial DNA-binding protein UvrD-helicase PF00580.16 gi|518651380|ref|YP_008140900.1| - 7.3e-51 173.3 0.3 1.2e-47 162.7 0.2 2.8 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|518651380|ref|YP_008140900.1| - 1.6e-34 119.9 0.0 4.7e-17 62.4 0.0 2.4 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.2 gi|518651380|ref|YP_008140900.1| - 1.4e-28 99.9 0.1 3.1e-28 98.8 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_19 PF13245.1 gi|518651380|ref|YP_008140900.1| - 2.1e-12 46.5 0.0 8.9e-12 44.6 0.0 2.1 1 0 0 1 1 1 1 Part of AAA domain UvrD_C_2 PF13538.1 gi|518651380|ref|YP_008140900.1| - 2e-10 40.7 0.1 1.6e-09 37.8 0.1 2.5 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Cas_Cas4 PF01930.12 gi|518651380|ref|YP_008140900.1| - 2.1e-09 37.4 0.3 5.7e-09 36.1 0.2 1.8 1 0 0 1 1 1 1 Domain of unknown function DUF83 DUF2800 PF10926.3 gi|518651380|ref|YP_008140900.1| - 3.9e-06 26.2 0.0 5.9e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) AAA_22 PF13401.1 gi|518651380|ref|YP_008140900.1| - 0.00091 19.3 0.0 1.1 9.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain DEAD PF00270.24 gi|518651380|ref|YP_008140900.1| - 0.028 13.9 0.1 0.3 10.5 0.0 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase Viral_helicase1 PF01443.13 gi|518651380|ref|YP_008140900.1| - 0.069 12.6 0.1 19 4.6 0.0 3.7 3 1 0 3 3 3 0 Viral (Superfamily 1) RNA helicase Paired_CXXCH_1 PF09699.5 gi|518651381|ref|YP_008140901.1| - 0.071 12.6 1.8 0.15 11.5 1.2 1.5 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) DUF1998 PF09369.5 gi|518651382|ref|YP_008140902.1| - 1.6e-15 57.4 0.1 3.3e-15 56.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) CLAMP PF14769.1 gi|518651382|ref|YP_008140902.1| - 0.0073 16.4 0.2 0.015 15.4 0.1 1.4 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Mlp PF03304.8 gi|518651382|ref|YP_008140902.1| - 0.033 14.1 0.7 0.033 14.1 0.5 1.9 2 0 0 2 2 2 0 Mlp lipoprotein family Zn_Tnp_IS1 PF03811.8 gi|518651382|ref|YP_008140902.1| - 0.055 12.9 2.4 0.7 9.4 0.1 2.5 2 0 0 2 2 2 0 InsA N-terminal domain zf-RING_4 PF14570.1 gi|518651382|ref|YP_008140902.1| - 0.11 12.1 2.3 7.3 6.2 0.3 2.8 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain PhnA_Zn_Ribbon PF08274.7 gi|518651382|ref|YP_008140902.1| - 0.24 11.1 2.7 1.3 8.8 0.1 2.5 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DNA_ligase_ZBD PF03119.11 gi|518651382|ref|YP_008140902.1| - 0.8 9.4 4.4 2.1 8.1 0.1 2.5 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-TFIIB PF13453.1 gi|518651382|ref|YP_008140902.1| - 1.3 8.3 4.0 23 4.2 0.1 2.9 2 0 0 2 2 2 0 Transcription factor zinc-finger Helicase_C PF00271.26 gi|518651383|ref|YP_008140903.1| - 2.1e-08 33.9 0.0 5.4e-08 32.5 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DNA_ligase_ZBD PF03119.11 gi|518651383|ref|YP_008140903.1| - 1 9.1 2.5 27 4.5 0.1 2.5 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain HhH-GPD PF00730.20 gi|518651384|ref|YP_008140904.1| - 4.4e-12 46.2 0.0 5.8e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|518651384|ref|YP_008140904.1| - 4.4e-06 26.1 0.0 7.9e-06 25.2 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_8 PF14716.1 gi|518651384|ref|YP_008140904.1| - 0.0018 18.4 0.0 0.0037 17.4 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.4 gi|518651384|ref|YP_008140904.1| - 0.46 10.7 2.2 0.78 10.0 1.6 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III DNA_methylase PF00145.12 gi|518651385|ref|YP_008140905.1| - 1.6e-51 175.3 2.1 2e-51 175.1 1.4 1.2 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase NYN PF01936.13 gi|518651387|ref|YP_008140907.1| - 7.8e-13 48.9 0.0 1e-12 48.5 0.0 1.2 1 0 0 1 1 1 1 NYN domain UDPG_MGDP_dh_N PF03721.9 gi|518651388|ref|YP_008140908.1| - 1.8e-18 66.5 0.1 4.3e-16 58.8 0.0 2.8 2 1 1 3 3 3 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|518651388|ref|YP_008140908.1| - 2.5e-17 62.8 0.2 4.5e-17 62.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain 2-Hacid_dh_C PF02826.14 gi|518651388|ref|YP_008140908.1| - 0.031 13.4 0.1 0.11 11.6 0.0 1.9 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|518651388|ref|YP_008140908.1| - 0.036 13.9 0.2 0.32 10.8 0.0 2.3 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|518651388|ref|YP_008140908.1| - 0.12 12.8 0.2 0.93 9.9 0.1 2.5 3 0 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Glycos_transf_2 PF00535.21 gi|518651389|ref|YP_008140909.1| - 1.5e-10 41.0 0.0 7.8e-10 38.6 0.0 2.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518651389|ref|YP_008140909.1| - 0.036 13.8 0.0 4.7 6.9 0.0 2.5 2 0 0 2 2 2 0 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.21 gi|518651390|ref|YP_008140910.1| - 5.1e-17 62.0 1.0 6e-13 48.8 0.2 3.3 2 1 0 2 2 2 2 Glycosyl transferase family 2 Methyltransf_23 PF13489.1 gi|518651390|ref|YP_008140910.1| - 7e-10 38.8 0.0 2e-09 37.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Glyco_tranf_2_3 PF13641.1 gi|518651390|ref|YP_008140910.1| - 2.6e-06 27.3 0.0 3.7e-05 23.6 0.0 2.3 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Methyltransf_12 PF08242.7 gi|518651390|ref|YP_008140910.1| - 0.0001 22.6 0.2 0.0015 18.9 0.0 3.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518651390|ref|YP_008140910.1| - 0.00014 22.2 0.0 0.00045 20.6 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518651390|ref|YP_008140910.1| - 0.00015 21.3 0.4 0.016 14.8 0.0 3.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_2 PF00891.13 gi|518651390|ref|YP_008140910.1| - 0.011 14.9 0.0 0.019 14.1 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase CMAS PF02353.15 gi|518651390|ref|YP_008140910.1| - 0.014 14.5 0.0 0.03 13.4 0.0 1.5 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.2 gi|518651390|ref|YP_008140910.1| - 0.017 15.6 0.2 0.15 12.6 0.1 2.6 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|518651390|ref|YP_008140910.1| - 0.019 14.3 0.0 0.042 13.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain CutA1 PF03091.10 gi|518651390|ref|YP_008140910.1| - 0.043 13.4 0.0 0.42 10.2 0.0 2.6 2 1 0 2 2 2 0 CutA1 divalent ion tolerance protein FtsJ PF01728.14 gi|518651390|ref|YP_008140910.1| - 0.05 13.5 0.0 0.12 12.3 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase DUF1031 PF06275.6 gi|518651391|ref|YP_008140911.1| - 0.059 13.4 0.7 0.19 11.8 0.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1031) ChlI PF13541.1 gi|518651391|ref|YP_008140911.1| - 0.067 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Subunit ChlI of Mg-chelatase Aminotran_5 PF00266.14 gi|518651392|ref|YP_008140912.1| - 2.2e-29 102.3 0.0 2.9e-29 101.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|518651392|ref|YP_008140912.1| - 2.4e-05 22.7 0.0 3.5e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DBI_PRT PF02277.12 gi|518651392|ref|YP_008140912.1| - 0.011 14.7 0.2 0.02 14.0 0.2 1.3 1 0 0 1 1 1 0 Phosphoribosyltransferase AA_permease PF00324.16 gi|518651393|ref|YP_008140913.1| - 2.3e-31 108.6 43.5 2.9e-31 108.3 30.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651393|ref|YP_008140913.1| - 8.1e-30 103.7 57.2 9.8e-30 103.4 39.7 1.0 1 0 0 1 1 1 1 Amino acid permease RRP7 PF12923.2 gi|518651394|ref|YP_008140914.1| - 0.012 15.6 0.5 0.013 15.5 0.4 1.0 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) DUF234 PF03008.9 gi|518651395|ref|YP_008140915.1| - 1.9e-23 82.4 4.9 2.6e-23 82.0 2.0 2.3 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function Arch_ATPase PF01637.13 gi|518651395|ref|YP_008140915.1| - 1.4e-19 70.7 0.2 3.1e-19 69.6 0.1 1.5 1 0 0 1 1 1 1 Archaeal ATPase HTH_5 PF01022.15 gi|518651395|ref|YP_008140915.1| - 0.0007 19.2 0.0 0.0014 18.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|518651395|ref|YP_008140915.1| - 0.0042 16.8 0.4 0.013 15.2 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_cat PF04471.7 gi|518651395|ref|YP_008140915.1| - 0.0059 16.3 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Restriction endonuclease AAA_14 PF13173.1 gi|518651395|ref|YP_008140915.1| - 0.0066 16.3 0.1 0.026 14.4 0.0 2.0 1 0 0 1 1 1 1 AAA domain HTH_27 PF13463.1 gi|518651395|ref|YP_008140915.1| - 0.031 14.5 0.0 0.093 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|518651395|ref|YP_008140915.1| - 0.099 12.3 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF217 PF02697.9 gi|518651396|ref|YP_008140916.1| - 4e-13 49.4 2.6 4.8e-13 49.1 1.8 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 Tmemb_cc2 PF10267.4 gi|518651396|ref|YP_008140916.1| - 0.032 12.8 0.7 0.037 12.6 0.5 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein COG5 PF10392.4 gi|518651396|ref|YP_008140916.1| - 0.063 13.2 0.2 0.071 13.0 0.2 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 DUF234 PF03008.9 gi|518651397|ref|YP_008140917.1| - 1.1e-21 76.7 0.9 1.1e-21 76.7 0.6 1.9 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function Mrr_cat PF04471.7 gi|518651397|ref|YP_008140917.1| - 1.7e-06 27.8 0.0 3.8e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 Restriction endonuclease DUF217 PF02697.9 gi|518651398|ref|YP_008140918.1| - 0.0038 17.4 1.8 0.0044 17.2 1.3 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 RHH_4 PF13467.1 gi|518651398|ref|YP_008140918.1| - 0.035 13.9 0.1 0.047 13.5 0.1 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain DRIM PF07539.7 gi|518651398|ref|YP_008140918.1| - 0.069 12.5 0.6 0.081 12.3 0.4 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis DUF4259 PF14078.1 gi|518651398|ref|YP_008140918.1| - 0.33 11.4 2.7 0.6 10.6 1.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4259) GCFC PF07842.7 gi|518651399|ref|YP_008140919.1| - 0.014 14.7 0.1 0.015 14.6 0.1 1.2 1 0 0 1 1 1 0 GC-rich sequence DNA-binding factor-like protein CcdA PF07362.7 gi|518651400|ref|YP_008140920.1| - 0.031 14.1 0.6 0.058 13.2 0.4 1.4 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA DUF3814 PF12769.2 gi|518651401|ref|YP_008140921.1| - 0.11 12.6 0.3 0.15 12.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3814) SNF2_N PF00176.18 gi|518651402|ref|YP_008140922.1| - 8e-62 208.7 0.0 1.2e-61 208.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.3 gi|518651402|ref|YP_008140922.1| - 5.5e-31 106.8 0.0 1.1e-30 105.9 0.0 1.5 1 0 0 1 1 1 1 SNF2 Helicase protein Helicase_C PF00271.26 gi|518651402|ref|YP_008140922.1| - 3.1e-13 49.3 0.0 7.2e-13 48.2 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518651402|ref|YP_008140922.1| - 8.7e-05 22.4 0.1 0.00072 19.4 0.0 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.9 gi|518651402|ref|YP_008140922.1| - 0.00071 19.3 0.0 0.006 16.3 0.0 2.1 2 0 0 2 2 2 1 Flavivirus DEAD domain AAA_22 PF13401.1 gi|518651402|ref|YP_008140922.1| - 0.0051 16.9 0.1 0.071 13.2 0.0 2.9 3 0 0 3 3 3 1 AAA domain SWIM PF04434.12 gi|518651403|ref|YP_008140923.1| - 3.2e-07 29.6 0.4 6.4e-07 28.7 0.3 1.5 1 0 0 1 1 1 1 SWIM zinc finger DUF2948 PF11164.3 gi|518651403|ref|YP_008140923.1| - 0.013 15.0 0.0 0.022 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2948) DUF1059 PF06348.6 gi|518651404|ref|YP_008140924.1| - 1.1e-23 82.8 0.3 1.2e-23 82.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) HTH_10 PF04967.7 gi|518651405|ref|YP_008140925.1| - 1.7e-14 53.0 0.0 2.8e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.11 gi|518651405|ref|YP_008140925.1| - 0.0013 18.0 0.0 0.0024 17.1 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Mga PF08280.6 gi|518651405|ref|YP_008140925.1| - 0.0029 17.3 0.2 0.024 14.4 0.0 2.4 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_11 PF08279.7 gi|518651405|ref|YP_008140925.1| - 0.061 12.9 0.0 0.19 11.3 0.0 1.8 1 0 0 1 1 1 0 HTH domain Sigma70_r4_2 PF08281.7 gi|518651405|ref|YP_008140925.1| - 0.072 12.5 0.0 0.29 10.6 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 IF2_N PF04760.10 gi|518651405|ref|YP_008140925.1| - 0.15 11.7 2.3 3.3 7.4 0.1 3.3 4 0 0 4 4 4 0 Translation initiation factor IF-2, N-terminal region AAA_14 PF13173.1 gi|518651407|ref|YP_008140927.1| - 2.6e-33 114.6 0.5 2.6e-33 114.6 0.3 2.5 2 1 1 3 3 3 1 AAA domain DUF4143 PF13635.1 gi|518651407|ref|YP_008140927.1| - 5.2e-10 39.3 1.9 7e-10 38.9 0.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) Arch_ATPase PF01637.13 gi|518651407|ref|YP_008140927.1| - 1.8e-07 31.1 5.3 3.2e-05 23.7 0.0 3.3 2 1 1 3 3 3 2 Archaeal ATPase Dpoe2NT PF12213.3 gi|518651407|ref|YP_008140927.1| - 0.019 14.8 0.8 0.059 13.2 0.1 2.2 2 0 0 2 2 2 0 DNA polymerases epsilon N terminal AAA_29 PF13555.1 gi|518651407|ref|YP_008140927.1| - 0.026 14.0 0.0 5.3 6.6 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|518651407|ref|YP_008140927.1| - 0.049 13.6 0.0 0.088 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Enolase_C PF00113.17 gi|518651407|ref|YP_008140927.1| - 1.4 7.7 4.6 0.35 9.8 0.8 1.6 2 0 0 2 2 2 0 Enolase, C-terminal TIM barrel domain Acetyltransf_7 PF13508.1 gi|518651408|ref|YP_008140928.1| - 1.7e-12 47.2 0.1 2.9e-12 46.5 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518651408|ref|YP_008140928.1| - 1.9e-10 40.6 0.1 2.7e-10 40.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518651408|ref|YP_008140928.1| - 2e-08 34.3 0.0 2.6e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|518651408|ref|YP_008140928.1| - 0.0013 18.5 0.0 0.01 15.6 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|518651408|ref|YP_008140928.1| - 0.0017 18.2 0.0 0.0024 17.7 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF4013 PF13197.1 gi|518651408|ref|YP_008140928.1| - 0.066 12.5 0.0 0.14 11.4 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4013) Cation_efflux PF01545.16 gi|518651409|ref|YP_008140929.1| - 6.4e-05 22.1 0.0 0.00091 18.3 0.0 2.1 1 1 1 2 2 2 1 Cation efflux family Sugar_tr PF00083.19 gi|518651413|ref|YP_008140933.1| - 1e-48 166.0 37.1 3.4e-32 111.6 7.6 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.11 gi|518651413|ref|YP_008140933.1| - 1.6e-39 135.6 59.4 4.7e-37 127.5 25.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily CcdA PF07362.7 gi|518651414|ref|YP_008140934.1| - 0.0049 16.7 0.9 0.056 13.3 0.1 2.0 1 1 1 2 2 2 1 Post-segregation antitoxin CcdA SRP54_N PF02881.14 gi|518651414|ref|YP_008140934.1| - 0.019 15.0 2.6 0.071 13.2 0.2 2.1 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain DUF4511 PF14974.1 gi|518651414|ref|YP_008140934.1| - 0.024 14.3 0.3 0.053 13.2 0.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4511) RHH_3 PF12651.2 gi|518651414|ref|YP_008140934.1| - 0.03 14.0 0.3 2.2 8.1 0.1 2.6 2 1 0 2 2 2 0 Ribbon-helix-helix domain PSK_trans_fac PF07704.6 gi|518651414|ref|YP_008140934.1| - 0.059 14.0 0.9 0.069 13.8 0.6 1.3 1 0 0 1 1 1 0 Rv0623-like transcription factor RepB PF07506.6 gi|518651414|ref|YP_008140934.1| - 0.091 12.6 0.7 0.091 12.6 0.5 1.1 1 0 0 1 1 1 0 RepB plasmid partitioning protein UPF0122 PF04297.9 gi|518651414|ref|YP_008140934.1| - 0.11 12.5 0.4 0.18 11.8 0.3 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like PIN PF01850.16 gi|518651415|ref|YP_008140935.1| - 8e-05 22.9 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain Thiolase_N PF00108.18 gi|518651416|ref|YP_008140936.1| - 1.1e-05 24.6 0.0 1.1e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain Cytochrom_B_N PF00033.14 gi|518651417|ref|YP_008140937.1| - 0.013 14.8 9.5 0.36 10.1 2.4 2.0 1 1 1 2 2 2 0 Cytochrome b(N-terminal)/b6/petB COX15-CtaA PF02628.10 gi|518651417|ref|YP_008140937.1| - 0.027 13.3 5.4 0.033 13.0 3.7 1.1 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein DUF4203 PF13886.1 gi|518651417|ref|YP_008140937.1| - 0.21 11.0 9.8 0.31 10.4 6.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4203) DUF2101 PF09874.4 gi|518651417|ref|YP_008140937.1| - 0.94 8.9 9.3 1.2 8.5 6.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Tetraspannin PF00335.15 gi|518651417|ref|YP_008140937.1| - 4.2 6.5 12.2 1.3 8.2 6.4 1.6 1 1 1 2 2 2 0 Tetraspanin family Arch_ATPase PF01637.13 gi|518651418|ref|YP_008140938.1| - 2.3e-30 106.0 4.4 2.3e-29 102.7 1.4 2.7 2 1 0 2 2 2 1 Archaeal ATPase DUF234 PF03008.9 gi|518651418|ref|YP_008140938.1| - 2.4e-19 69.3 1.0 2.4e-19 69.3 0.7 2.1 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.1 gi|518651418|ref|YP_008140938.1| - 4.5e-12 45.9 0.3 2e-11 43.9 0.2 2.1 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|518651418|ref|YP_008140938.1| - 5e-08 33.1 0.0 1e-07 32.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|518651418|ref|YP_008140938.1| - 1.7e-05 24.8 0.0 0.0058 16.6 0.0 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA_24 PF13479.1 gi|518651418|ref|YP_008140938.1| - 0.00031 20.3 0.0 0.00082 19.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain NDUF_B5 PF09781.4 gi|518651418|ref|YP_008140938.1| - 0.0049 16.1 0.2 1 8.5 0.0 2.6 2 0 0 2 2 2 2 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit TrmB PF01978.14 gi|518651418|ref|YP_008140938.1| - 0.0095 15.6 0.1 0.027 14.1 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|518651418|ref|YP_008140938.1| - 0.063 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 MarR family AAA_18 PF13238.1 gi|518651418|ref|YP_008140938.1| - 0.17 12.2 3.3 0.37 11.1 0.0 3.0 4 0 0 4 4 4 0 AAA domain SLAC1 PF03595.12 gi|518651420|ref|YP_008140940.1| - 5.7e-32 110.6 40.8 6.7e-32 110.4 28.3 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel TetR_N PF00440.18 gi|518651421|ref|YP_008140941.1| - 2.3e-10 39.9 0.3 3.2e-10 39.4 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Fic PF02661.13 gi|518651422|ref|YP_008140942.1| - 7.5e-10 39.3 0.1 3.2e-09 37.3 0.1 2.1 2 1 0 2 2 2 1 Fic/DOC family DUF1900 PF08954.6 gi|518651422|ref|YP_008140942.1| - 0.035 13.6 0.1 0.089 12.3 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1900) DUF1889 PF08986.5 gi|518651422|ref|YP_008140942.1| - 0.047 13.8 0.6 0.16 12.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1889) MFS_1 PF07690.11 gi|518651424|ref|YP_008140944.1| - 5.8e-23 81.1 109.0 9e-20 70.6 47.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651424|ref|YP_008140944.1| - 0.0032 16.0 43.7 0.068 11.7 3.8 3.2 1 1 2 3 3 3 3 Sugar (and other) transporter AhpC-TSA PF00578.16 gi|518651425|ref|YP_008140945.1| - 5.8e-37 126.1 0.0 7.4e-37 125.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|518651425|ref|YP_008140945.1| - 1.1e-23 83.4 0.0 1.3e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin DUF1248 PF06852.7 gi|518651425|ref|YP_008140945.1| - 0.076 12.2 0.5 0.13 11.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1248) DDE_Tnp_1 PF01609.16 gi|518651426|ref|YP_008140946.1| - 4.7e-15 55.6 0.0 9.9e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain ANF_receptor PF01094.23 gi|518651426|ref|YP_008140946.1| - 0.012 14.4 0.0 0.02 13.6 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region DDE_Tnp_1_3 PF13612.1 gi|518651426|ref|YP_008140946.1| - 0.13 12.0 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Transposase DDE domain DDE_5 PF13546.1 gi|518651426|ref|YP_008140946.1| - 0.14 11.0 0.0 0.21 10.3 0.0 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease AMP-binding PF00501.23 gi|518651427|ref|YP_008140947.1| - 1.1e-77 261.2 0.0 1.2e-77 261.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651427|ref|YP_008140947.1| - 5.2e-10 40.1 0.0 1.1e-09 39.0 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain HTH_19 PF12844.2 gi|518651429|ref|YP_008140949.1| - 0.096 12.7 0.7 0.24 11.4 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain OrfB_Zn_ribbon PF07282.6 gi|518651430|ref|YP_008140950.1| - 1.9e-12 46.6 0.2 5.2e-12 45.2 0.2 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518651430|ref|YP_008140950.1| - 0.0081 15.4 1.4 0.026 13.8 1.0 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding DNA_RNApol_7kD PF03604.8 gi|518651430|ref|YP_008140950.1| - 0.048 13.1 2.4 0.11 12.0 1.7 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF3544 PF12064.3 gi|518651430|ref|YP_008140950.1| - 0.085 12.6 0.7 0.14 11.9 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3544) zinc_ribbon_5 PF13719.1 gi|518651430|ref|YP_008140950.1| - 0.086 12.4 2.9 0.52 9.9 2.0 2.4 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518651430|ref|YP_008140950.1| - 0.16 11.6 3.7 1.1 9.0 2.6 2.5 1 1 0 1 1 1 0 zinc-ribbon domain RecR PF02132.10 gi|518651430|ref|YP_008140950.1| - 0.38 10.2 2.2 6.2 6.3 0.0 2.5 2 0 0 2 2 2 0 RecR protein DUF1451 PF07295.6 gi|518651430|ref|YP_008140950.1| - 1.4 8.6 5.6 1 9.1 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) MFS_1 PF07690.11 gi|518651431|ref|YP_008140951.1| - 4e-15 55.3 36.8 4e-15 55.3 25.5 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF996 PF06195.8 gi|518651432|ref|YP_008140952.1| - 3.6e-15 56.1 25.7 4.5e-15 55.8 17.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF996) IncA PF04156.9 gi|518651432|ref|YP_008140952.1| - 0.015 14.9 1.2 0.015 14.9 0.8 2.5 2 1 0 2 2 2 0 IncA protein DUF4097 PF13349.1 gi|518651432|ref|YP_008140952.1| - 0.037 13.5 1.5 0.037 13.5 1.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4097) DUF973 PF06157.6 gi|518651432|ref|YP_008140952.1| - 0.39 9.6 28.8 0.53 9.2 19.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF4013 PF13197.1 gi|518651432|ref|YP_008140952.1| - 0.66 9.2 35.0 0.79 9.0 24.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) UPF0182 PF03699.8 gi|518651432|ref|YP_008140952.1| - 0.76 7.6 3.8 0.82 7.5 2.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Viral_Beta_CD PF04530.7 gi|518651432|ref|YP_008140952.1| - 6 7.0 7.9 18 5.4 0.0 2.9 1 1 2 3 3 3 0 Viral Beta C/D like family Pil1 PF13805.1 gi|518651433|ref|YP_008140953.1| - 0.094 11.8 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Eisosome component PIL1 MFS_1 PF07690.11 gi|518651434|ref|YP_008140954.1| - 4.7e-26 91.3 38.2 8.8e-14 50.9 12.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.2 gi|518651434|ref|YP_008140954.1| - 0.023 14.4 0.1 0.023 14.4 0.1 4.8 5 0 0 5 5 5 0 MFS_1 like family PSI_PsaJ PF01701.13 gi|518651435|ref|YP_008140955.1| - 0.092 12.5 0.3 0.19 11.5 0.2 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ ORMDL PF04061.9 gi|518651435|ref|YP_008140955.1| - 0.3 10.6 1.8 12 5.4 0.2 2.2 2 0 0 2 2 2 0 ORMDL family AMP-binding PF00501.23 gi|518651436|ref|YP_008140956.1| - 9.9e-91 304.1 0.0 1.2e-90 303.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651436|ref|YP_008140956.1| - 7.5e-16 58.8 0.2 1.9e-15 57.5 0.2 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Eaf7 PF07904.8 gi|518651438|ref|YP_008140958.1| - 0.05 13.5 0.5 0.15 12.0 0.0 2.0 2 0 0 2 2 2 0 Chromatin modification-related protein EAF7 KaiC PF06745.8 gi|518651440|ref|YP_008140960.1| - 4.6e-25 88.0 3.2 8.6e-25 87.1 2.2 1.5 1 0 0 1 1 1 1 KaiC NMD3 PF04981.8 gi|518651440|ref|YP_008140960.1| - 0.046 12.8 0.0 0.087 11.9 0.0 1.4 1 0 0 1 1 1 0 NMD3 family Glyco_tranf_2_3 PF13641.1 gi|518651441|ref|YP_008140961.1| - 1.8e-26 93.3 0.0 2.4e-26 92.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|518651441|ref|YP_008140961.1| - 5.4e-24 84.9 0.0 5.4e-24 84.9 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 gi|518651441|ref|YP_008140961.1| - 5.1e-18 65.3 0.3 9.7e-18 64.4 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|518651441|ref|YP_008140961.1| - 1e-13 50.9 0.0 1.6e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Cellulose_synt PF03552.9 gi|518651441|ref|YP_008140961.1| - 1.1e-10 40.4 6.0 2.4e-10 39.4 3.1 1.8 1 1 1 2 2 2 1 Cellulose synthase Glyco_tranf_2_2 PF10111.4 gi|518651441|ref|YP_008140961.1| - 0.00074 18.6 0.8 0.00074 18.6 0.6 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 DUF373 PF04123.8 gi|518651441|ref|YP_008140961.1| - 3.2 6.6 13.0 4.8 6.1 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DDE_Tnp_1 PF01609.16 gi|518651442|ref|YP_008140962.1| - 1.4e-29 103.1 0.3 2.4e-29 102.4 0.1 1.5 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518651442|ref|YP_008140962.1| - 1.7e-05 24.6 1.5 0.01 15.5 0.0 2.6 1 1 0 2 2 2 2 Transposase DDE domain HTH_26 PF13443.1 gi|518651442|ref|YP_008140962.1| - 0.11 12.7 0.6 0.37 11.0 0.0 2.2 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain TPR_11 PF13414.1 gi|518651445|ref|YP_008140965.1| - 1.9e-25 88.2 19.0 5.5e-09 35.5 1.2 6.0 5 1 1 6 6 6 4 TPR repeat TPR_16 PF13432.1 gi|518651445|ref|YP_008140965.1| - 7.2e-21 74.3 5.5 1.4e-05 25.6 0.7 6.4 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.23 gi|518651445|ref|YP_008140965.1| - 6.6e-19 66.6 14.8 1.6e-05 24.3 0.1 7.8 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518651445|ref|YP_008140965.1| - 2.1e-18 65.1 7.5 0.00044 20.6 0.1 8.9 4 2 5 10 10 9 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|518651445|ref|YP_008140965.1| - 6.7e-18 63.1 15.7 0.0052 16.5 0.1 8.0 8 0 0 8 8 7 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|518651445|ref|YP_008140965.1| - 5.7e-17 61.8 15.0 2.6e-05 24.4 0.1 7.6 3 3 3 7 7 7 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|518651445|ref|YP_008140965.1| - 1.4e-14 52.9 8.8 1.8e-05 24.5 0.1 7.1 9 0 0 9 9 7 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|518651445|ref|YP_008140965.1| - 6.9e-13 48.3 18.6 3.6e-05 23.6 0.6 6.8 5 2 2 7 7 6 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|518651445|ref|YP_008140965.1| - 2.1e-12 45.8 7.2 0.019 14.7 0.0 6.9 8 0 0 8 8 6 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|518651445|ref|YP_008140965.1| - 1.7e-11 43.0 26.7 0.0037 16.9 0.1 8.3 10 0 0 10 10 9 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|518651445|ref|YP_008140965.1| - 1.1e-10 41.1 1.2 0.048 13.5 0.0 4.6 2 1 1 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|518651445|ref|YP_008140965.1| - 1.5e-09 37.8 18.8 3.9e-05 23.6 0.3 6.6 2 2 7 9 9 9 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|518651445|ref|YP_008140965.1| - 2.3e-07 30.1 5.0 0.0076 15.3 0.2 4.1 2 1 2 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|518651445|ref|YP_008140965.1| - 1e-06 27.8 16.0 0.0004 19.2 0.0 4.8 2 1 1 5 5 5 2 NMDA receptor-regulated protein 1 TPR_20 PF14561.1 gi|518651445|ref|YP_008140965.1| - 4.9e-05 23.3 8.5 0.07 13.2 0.1 5.8 4 2 5 9 9 8 1 Tetratricopeptide repeat BTAD PF03704.12 gi|518651445|ref|YP_008140965.1| - 7.1e-05 23.1 0.6 0.18 12.1 0.4 3.3 2 1 0 2 2 2 1 Bacterial transcriptional activator domain TPR_4 PF07721.9 gi|518651445|ref|YP_008140965.1| - 0.00029 20.9 0.3 0.67 10.5 0.0 4.1 5 0 0 5 5 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|518651445|ref|YP_008140965.1| - 0.001 19.3 14.1 0.58 10.7 0.0 6.9 8 0 0 8 8 7 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 gi|518651445|ref|YP_008140965.1| - 0.008 16.4 0.8 1.9 8.6 0.0 3.4 3 1 1 4 4 3 1 Alkyl sulfatase dimerisation TPR_10 PF13374.1 gi|518651445|ref|YP_008140965.1| - 0.0091 15.8 8.3 24 5.0 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|518651445|ref|YP_008140965.1| - 0.011 15.5 2.6 0.28 10.9 0.1 4.2 4 1 1 5 5 4 0 Domain of Unknown Function (DUF3856) SPOB_a PF14689.1 gi|518651445|ref|YP_008140965.1| - 0.033 13.7 4.8 3.2 7.3 0.0 4.6 5 0 0 5 5 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain MutL PF13941.1 gi|518651445|ref|YP_008140965.1| - 0.15 10.3 0.0 0.26 9.5 0.0 1.3 1 0 0 1 1 1 0 MutL protein Fis1_TPR_C PF14853.1 gi|518651445|ref|YP_008140965.1| - 0.72 9.7 4.5 2.8 7.9 0.0 4.0 5 0 0 5 5 4 0 Fis1 C-terminal tetratricopeptide repeat Hemerythrin PF01814.18 gi|518651446|ref|YP_008140966.1| - 1.1e-06 28.7 0.0 1.7e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain DASH_Dad4 PF08650.5 gi|518651446|ref|YP_008140966.1| - 0.074 12.9 0.7 0.17 11.8 0.5 1.7 1 0 0 1 1 1 0 DASH complex subunit Dad4 HTH_5 PF01022.15 gi|518651447|ref|YP_008140967.1| - 1.6e-12 46.8 0.3 4.9e-12 45.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|518651447|ref|YP_008140967.1| - 8.9e-09 35.0 0.0 1.8e-08 34.0 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.14 gi|518651447|ref|YP_008140967.1| - 2.5e-05 23.8 0.0 7.6e-05 22.3 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|518651447|ref|YP_008140967.1| - 0.00027 20.9 0.1 0.0053 16.7 0.0 2.6 3 0 0 3 3 3 1 Winged helix DNA-binding domain HxlR PF01638.12 gi|518651447|ref|YP_008140967.1| - 0.0015 18.1 0.0 0.35 10.5 0.0 2.7 2 1 0 2 2 2 1 HxlR-like helix-turn-helix HTH_24 PF13412.1 gi|518651447|ref|YP_008140967.1| - 0.0023 17.2 0.8 0.019 14.3 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_9 PF08221.6 gi|518651447|ref|YP_008140967.1| - 0.0076 16.1 0.1 0.017 14.9 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_DeoR PF08220.7 gi|518651447|ref|YP_008140967.1| - 0.053 13.0 0.0 0.2 11.2 0.0 2.0 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_27 PF13463.1 gi|518651447|ref|YP_008140967.1| - 0.056 13.7 0.0 0.63 10.4 0.0 2.5 3 0 0 3 3 3 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|518651447|ref|YP_008140967.1| - 0.077 12.8 0.5 10 6.0 0.0 2.6 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain HTH_45 PF14947.1 gi|518651447|ref|YP_008140967.1| - 0.17 11.7 0.9 0.66 9.8 0.0 2.2 3 0 0 3 3 3 0 Winged helix-turn-helix MFS_1 PF07690.11 gi|518651448|ref|YP_008140968.1| - 8.7e-17 60.8 50.0 8.7e-17 60.8 34.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Methyltransf_18 PF12847.2 gi|518651449|ref|YP_008140969.1| - 1.2e-15 58.0 0.0 3.3e-15 56.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518651449|ref|YP_008140969.1| - 3.7e-14 52.5 0.0 5.4e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518651449|ref|YP_008140969.1| - 4.4e-14 52.7 0.0 8.1e-14 51.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518651449|ref|YP_008140969.1| - 1.1e-11 45.0 0.0 2.5e-11 43.8 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518651449|ref|YP_008140969.1| - 5.9e-11 42.3 0.0 7.9e-11 41.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518651449|ref|YP_008140969.1| - 2.8e-10 40.4 0.0 4.6e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|518651449|ref|YP_008140969.1| - 2.5e-07 30.7 0.0 4.6e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518651449|ref|YP_008140969.1| - 1.4e-05 24.3 0.0 6.5e-05 22.1 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family PrmA PF06325.8 gi|518651449|ref|YP_008140969.1| - 4.6e-05 22.6 0.0 6.5e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.15 gi|518651449|ref|YP_008140969.1| - 9.2e-05 21.6 0.0 0.00018 20.7 0.0 1.5 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|518651449|ref|YP_008140969.1| - 0.00013 21.3 0.0 0.00021 20.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain LCM PF04072.9 gi|518651449|ref|YP_008140969.1| - 0.00019 21.0 0.0 0.00035 20.1 0.0 1.4 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Methyltransf_15 PF09445.5 gi|518651449|ref|YP_008140969.1| - 0.00086 18.8 0.0 0.0013 18.3 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.15 gi|518651449|ref|YP_008140969.1| - 0.0011 18.0 0.0 0.0018 17.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase FmrO PF07091.6 gi|518651449|ref|YP_008140969.1| - 0.0034 16.4 0.0 0.0057 15.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) DUF938 PF06080.7 gi|518651449|ref|YP_008140969.1| - 0.0048 16.4 0.0 0.0071 15.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF938) PCMT PF01135.14 gi|518651449|ref|YP_008140969.1| - 0.0071 15.8 0.0 0.017 14.6 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF43 PF01861.11 gi|518651449|ref|YP_008140969.1| - 0.032 13.2 0.4 0.8 8.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF43 FtsJ PF01728.14 gi|518651449|ref|YP_008140969.1| - 0.044 13.7 0.0 0.066 13.1 0.0 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase TehB PF03848.9 gi|518651449|ref|YP_008140969.1| - 0.053 12.6 0.0 0.079 12.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_32 PF13679.1 gi|518651449|ref|YP_008140969.1| - 0.066 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.13 gi|518651449|ref|YP_008140969.1| - 0.12 11.9 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Transposase_mut PF00872.13 gi|518651450|ref|YP_008140970.1| - 2.3e-88 296.3 0.0 3e-88 295.9 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518651450|ref|YP_008140970.1| - 1.4e-09 38.0 0.0 3e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.1 gi|518651450|ref|YP_008140970.1| - 0.00057 19.8 0.2 1.2 9.1 0.1 2.5 1 1 0 2 2 2 2 DDE domain AA_permease_2 PF13520.1 gi|518651451|ref|YP_008140971.1| - 2.4e-24 85.6 59.8 2.4e-24 85.6 41.5 1.6 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518651451|ref|YP_008140971.1| - 2e-22 79.1 57.0 3.3e-22 78.4 39.5 1.3 1 1 0 1 1 1 1 Amino acid permease ABC_tran PF00005.22 gi|518651452|ref|YP_008140972.1| - 2.5e-23 82.9 0.0 3.7e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|518651452|ref|YP_008140972.1| - 6.3e-05 22.2 0.9 0.018 14.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|518651452|ref|YP_008140972.1| - 0.00059 19.7 1.9 0.0083 16.0 0.7 2.6 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit DUF258 PF03193.11 gi|518651452|ref|YP_008140972.1| - 0.0013 17.9 0.0 0.002 17.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|518651452|ref|YP_008140972.1| - 0.0023 18.0 0.5 0.012 15.7 0.4 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518651452|ref|YP_008140972.1| - 0.0035 17.6 0.1 0.0084 16.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|518651452|ref|YP_008140972.1| - 0.0039 16.9 0.0 0.0067 16.1 0.0 1.3 1 0 0 1 1 1 1 Part of AAA domain AAA_17 PF13207.1 gi|518651452|ref|YP_008140972.1| - 0.0047 17.7 3.3 0.0052 17.5 0.9 2.1 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|518651452|ref|YP_008140972.1| - 0.0086 15.5 0.2 0.021 14.3 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|518651452|ref|YP_008140972.1| - 0.014 14.9 0.2 0.041 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain KAP_NTPase PF07693.9 gi|518651452|ref|YP_008140972.1| - 0.022 13.7 1.3 1.2 8.0 0.0 2.1 2 0 0 2 2 2 0 KAP family P-loop domain AAA_14 PF13173.1 gi|518651452|ref|YP_008140972.1| - 0.026 14.4 2.1 0.32 10.9 0.0 2.7 2 1 1 3 3 3 0 AAA domain AAA_25 PF13481.1 gi|518651452|ref|YP_008140972.1| - 0.048 13.0 0.2 0.2 11.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|518651452|ref|YP_008140972.1| - 0.084 12.8 0.2 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|518651452|ref|YP_008140972.1| - 0.099 12.9 7.0 0.21 11.9 4.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|518651452|ref|YP_008140972.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain KaiC PF06745.8 gi|518651452|ref|YP_008140972.1| - 0.11 11.5 0.5 0.2 10.7 0.1 1.5 2 0 0 2 2 2 0 KaiC oligo_HPY PF08352.7 gi|518651452|ref|YP_008140972.1| - 0.14 12.5 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region AAA_30 PF13604.1 gi|518651452|ref|YP_008140972.1| - 0.14 11.7 0.1 1.3 8.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|518651452|ref|YP_008140972.1| - 0.16 10.8 0.1 0.25 10.2 0.1 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_21 PF13304.1 gi|518651452|ref|YP_008140972.1| - 0.17 11.8 0.1 0.17 11.8 0.1 3.0 2 1 0 3 3 3 0 AAA domain PhoH PF02562.11 gi|518651452|ref|YP_008140972.1| - 0.18 11.0 0.7 0.47 9.6 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein ABC_tran PF00005.22 gi|518651453|ref|YP_008140973.1| - 7e-27 94.3 0.0 1.1e-26 93.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651453|ref|YP_008140973.1| - 1.3e-11 45.0 4.7 1.7e-09 38.0 3.3 2.4 1 1 0 1 1 1 1 AAA domain oligo_HPY PF08352.7 gi|518651453|ref|YP_008140973.1| - 1.2e-09 38.4 0.0 2.2e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.14 gi|518651453|ref|YP_008140973.1| - 0.00016 21.0 1.5 0.0036 16.5 1.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|518651453|ref|YP_008140973.1| - 0.00063 20.1 0.6 0.0011 19.3 0.4 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|518651453|ref|YP_008140973.1| - 0.00077 18.9 0.2 0.015 14.7 0.1 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain Arch_ATPase PF01637.13 gi|518651453|ref|YP_008140973.1| - 0.0012 18.5 0.2 0.0019 17.9 0.1 1.3 1 0 0 1 1 1 1 Archaeal ATPase AAA_15 PF13175.1 gi|518651453|ref|YP_008140973.1| - 0.0017 17.5 2.1 0.047 12.7 0.2 2.4 1 1 1 2 2 2 1 AAA ATPase domain NB-ARC PF00931.17 gi|518651453|ref|YP_008140973.1| - 0.0021 16.9 0.1 0.0038 16.1 0.1 1.4 1 0 0 1 1 1 1 NB-ARC domain NACHT PF05729.7 gi|518651453|ref|YP_008140973.1| - 0.0033 17.1 0.1 0.0064 16.1 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA_10 PF12846.2 gi|518651453|ref|YP_008140973.1| - 0.0041 16.6 0.4 0.0069 15.8 0.2 1.4 1 1 0 1 1 1 1 AAA-like domain T2SE PF00437.15 gi|518651453|ref|YP_008140973.1| - 0.0044 15.9 0.0 0.0066 15.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein DUF87 PF01935.12 gi|518651453|ref|YP_008140973.1| - 0.011 15.6 0.1 0.027 14.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|518651453|ref|YP_008140973.1| - 0.013 15.6 0.1 0.043 13.9 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|518651453|ref|YP_008140973.1| - 0.016 15.0 0.4 0.083 12.7 0.3 2.2 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|518651453|ref|YP_008140973.1| - 0.019 14.6 0.1 0.046 13.4 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|518651453|ref|YP_008140973.1| - 0.024 13.4 0.0 0.034 12.9 0.0 1.1 1 0 0 1 1 1 0 ArgK protein AAA_17 PF13207.1 gi|518651453|ref|YP_008140973.1| - 0.03 15.1 0.0 0.069 13.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Miro PF08477.8 gi|518651453|ref|YP_008140973.1| - 0.045 14.2 0.0 0.083 13.3 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein AAA_16 PF13191.1 gi|518651453|ref|YP_008140973.1| - 0.052 13.5 0.0 0.07 13.1 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.1 gi|518651453|ref|YP_008140973.1| - 0.059 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|518651453|ref|YP_008140973.1| - 0.14 11.9 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain FtsK_SpoIIIE PF01580.13 gi|518651453|ref|YP_008140973.1| - 0.14 11.6 0.1 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF258 PF03193.11 gi|518651453|ref|YP_008140973.1| - 0.15 11.2 0.7 0.24 10.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function, DUF258 DUF3584 PF12128.3 gi|518651453|ref|YP_008140973.1| - 0.18 9.1 0.1 0.3 8.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF3262 PF11660.3 gi|518651455|ref|YP_008140975.1| - 0.018 15.1 0.5 0.018 15.1 0.4 2.7 2 2 0 2 2 2 0 Protein of unknown function (DUF3262) DUF1352 PF07086.7 gi|518651455|ref|YP_008140975.1| - 0.045 13.3 6.8 0.068 12.7 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1352) DUF308 PF03729.8 gi|518651455|ref|YP_008140975.1| - 0.073 13.0 0.6 0.073 13.0 0.4 3.4 2 1 0 2 2 2 0 Short repeat of unknown function (DUF308) SLAC1 PF03595.12 gi|518651456|ref|YP_008140976.1| - 1.4e-10 40.3 22.8 1.7e-10 40.1 15.8 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel DDE_Tnp_1 PF01609.16 gi|518651457|ref|YP_008140977.1| - 1.5e-20 73.6 0.8 2.1e-20 73.1 0.5 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518651457|ref|YP_008140977.1| - 1.8e-10 40.7 0.2 3e-10 40.0 0.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518651457|ref|YP_008140977.1| - 0.0002 21.4 0.1 0.00045 20.3 0.1 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.1 gi|518651457|ref|YP_008140977.1| - 0.0041 16.7 0.0 0.0078 15.8 0.0 1.6 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1_2 PF13586.1 gi|518651457|ref|YP_008140977.1| - 0.023 14.8 0.2 0.068 13.3 0.2 1.9 1 1 0 1 1 1 0 Transposase DDE domain DDE_Tnp_1_6 PF13751.1 gi|518651457|ref|YP_008140977.1| - 0.096 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Transposase DDE domain SLAC1 PF03595.12 gi|518651458|ref|YP_008140978.1| - 4.3e-09 35.4 9.3 4.9e-09 35.2 6.4 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel DUF308 PF03729.8 gi|518651458|ref|YP_008140978.1| - 3.7 7.6 15.3 4.6 7.3 3.0 2.5 1 1 0 2 2 2 0 Short repeat of unknown function (DUF308) UxuA PF03786.8 gi|518651459|ref|YP_008140979.1| - 2e-109 365.3 1.7 4.4e-73 245.8 0.1 2.0 1 1 1 2 2 2 2 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.19 gi|518651459|ref|YP_008140979.1| - 7.9e-13 48.1 0.0 1.5e-12 47.2 0.0 1.5 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel adh_short PF00106.20 gi|518651460|ref|YP_008140980.1| - 1.8e-28 99.5 0.0 3.1e-28 98.7 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518651460|ref|YP_008140980.1| - 2.6e-27 96.1 0.5 3.5e-27 95.7 0.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518651460|ref|YP_008140980.1| - 6.1e-12 45.5 0.1 2e-11 43.8 0.0 1.7 1 1 0 1 1 1 1 KR domain NAD_binding_10 PF13460.1 gi|518651460|ref|YP_008140980.1| - 0.00034 20.6 0.0 0.00041 20.3 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|518651460|ref|YP_008140980.1| - 0.00037 20.0 0.1 0.00055 19.4 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Eno-Rase_NADH_b PF12242.3 gi|518651460|ref|YP_008140980.1| - 0.0021 17.7 0.1 0.0066 16.2 0.1 1.9 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3Beta_HSD PF01073.14 gi|518651460|ref|YP_008140980.1| - 0.0045 15.7 0.9 0.0061 15.3 0.6 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|518651460|ref|YP_008140980.1| - 0.0051 15.7 0.0 0.0072 15.2 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain THF_DHG_CYH_C PF02882.14 gi|518651460|ref|YP_008140980.1| - 0.0079 15.2 1.5 0.075 12.1 0.0 2.8 1 1 2 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DFP PF04127.10 gi|518651460|ref|YP_008140980.1| - 0.015 14.9 0.0 0.047 13.3 0.0 1.9 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein Vac14_Fab1_bd PF12755.2 gi|518651460|ref|YP_008140980.1| - 0.11 12.8 0.1 0.76 10.2 0.0 2.2 2 0 0 2 2 2 0 Vacuolar 14 Fab1-binding region Grp1_Fun34_YaaH PF01184.14 gi|518651461|ref|YP_008140981.1| - 1.1e-44 152.2 30.2 1.5e-44 151.8 20.9 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family AMP-binding PF00501.23 gi|518651462|ref|YP_008140982.1| - 8.3e-92 307.7 0.0 1e-91 307.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651462|ref|YP_008140982.1| - 1.4e-18 67.5 0.1 3.4e-18 66.3 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Aldo_ket_red PF00248.16 gi|518651463|ref|YP_008140983.1| - 1.6e-61 207.6 0.4 1.9e-61 207.4 0.3 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Glyco_hydro_15 PF00723.16 gi|518651464|ref|YP_008140984.1| - 8.3e-51 172.9 2.5 1.8e-48 165.2 0.1 2.3 2 1 1 3 3 3 2 Glycosyl hydrolases family 15 Peptidase_S39 PF02122.10 gi|518651464|ref|YP_008140984.1| - 0.04 13.2 0.0 0.51 9.6 0.0 2.3 2 0 0 2 2 2 0 Peptidase S39 Profilin PF00235.14 gi|518651464|ref|YP_008140984.1| - 0.086 12.9 0.0 19 5.4 0.0 2.5 2 0 0 2 2 2 0 Profilin MFS_1 PF07690.11 gi|518651465|ref|YP_008140985.1| - 9.3e-29 100.2 58.7 2.3e-16 59.4 31.3 2.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518651465|ref|YP_008140985.1| - 1.2e-07 30.2 12.2 1.9e-05 23.0 4.1 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector DUF1304 PF06993.7 gi|518651465|ref|YP_008140985.1| - 0.008 15.8 0.5 0.008 15.8 0.3 3.1 4 1 1 5 5 5 1 Protein of unknown function (DUF1304) ABC_tran PF00005.22 gi|518651466|ref|YP_008140986.1| - 1.1e-34 119.6 0.0 1.9e-34 118.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651466|ref|YP_008140986.1| - 1.6e-08 34.8 0.8 5.2e-06 26.6 0.5 2.4 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|518651466|ref|YP_008140986.1| - 2.3e-05 23.6 0.0 0.14 11.1 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain DUF87 PF01935.12 gi|518651466|ref|YP_008140986.1| - 0.0016 18.2 0.4 0.019 14.8 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function DUF87 SbcCD_C PF13558.1 gi|518651466|ref|YP_008140986.1| - 0.0044 16.9 0.1 0.051 13.4 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.1 gi|518651466|ref|YP_008140986.1| - 0.013 15.0 0.1 0.028 13.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|518651466|ref|YP_008140986.1| - 0.021 15.6 0.0 0.041 14.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.14 gi|518651466|ref|YP_008140986.1| - 0.022 13.9 1.0 0.21 10.7 0.7 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|518651466|ref|YP_008140986.1| - 0.024 14.9 2.3 0.077 13.3 1.6 1.9 1 1 0 1 1 1 0 AAA domain Miro PF08477.8 gi|518651466|ref|YP_008140986.1| - 0.048 14.1 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein AAA_16 PF13191.1 gi|518651466|ref|YP_008140986.1| - 0.052 13.5 0.2 0.13 12.2 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_10 PF12846.2 gi|518651466|ref|YP_008140986.1| - 0.07 12.5 1.1 0.18 11.2 0.4 1.9 1 1 0 2 2 2 0 AAA-like domain PduV-EutP PF10662.4 gi|518651466|ref|YP_008140986.1| - 0.095 12.1 0.0 0.2 11.1 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_18 PF13238.1 gi|518651466|ref|YP_008140986.1| - 0.11 12.8 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain TOBE_2 PF08402.5 gi|518651466|ref|YP_008140986.1| - 0.11 12.5 0.0 0.37 10.8 0.0 2.0 1 1 1 2 2 2 0 TOBE domain DUF258 PF03193.11 gi|518651466|ref|YP_008140986.1| - 0.11 11.6 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 BPD_transp_1 PF00528.17 gi|518651467|ref|YP_008140987.1| - 3.7e-15 55.9 20.9 3.7e-15 55.9 14.5 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2061 PF09834.4 gi|518651467|ref|YP_008140987.1| - 1.9 8.7 12.0 8.3 6.6 0.0 3.5 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) Adipogenin PF15202.1 gi|518651467|ref|YP_008140987.1| - 5.1 7.0 6.2 2.3 8.1 0.4 2.8 2 1 1 3 3 3 0 Adipogenin BPD_transp_1 PF00528.17 gi|518651468|ref|YP_008140988.1| - 1.3e-11 44.3 18.7 1.3e-11 44.3 13.0 2.1 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF4418 PF14387.1 gi|518651468|ref|YP_008140988.1| - 3.6 7.3 8.1 2.4 7.9 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4418) ADH_N PF08240.7 gi|518651470|ref|YP_008140990.1| - 3.5e-20 71.7 0.6 6.8e-20 70.8 0.4 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Shikimate_DH PF01488.15 gi|518651470|ref|YP_008140990.1| - 0.00079 19.5 0.0 0.0016 18.5 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518651470|ref|YP_008140990.1| - 0.021 13.9 0.0 0.035 13.2 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|518651470|ref|YP_008140990.1| - 0.032 13.2 0.0 0.054 12.5 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain MR_MLE_C PF13378.1 gi|518651471|ref|YP_008140991.1| - 1.4e-23 83.0 0.0 2.1e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE PF01188.16 gi|518651471|ref|YP_008140991.1| - 2.3e-12 47.2 0.0 4e-12 46.4 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MR_MLE_N PF02746.11 gi|518651471|ref|YP_008140991.1| - 3.4e-09 36.7 0.0 6.5e-09 35.7 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LigB PF02900.13 gi|518651472|ref|YP_008140992.1| - 5e-11 42.0 0.0 5.9e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF998 PF06197.8 gi|518651473|ref|YP_008140993.1| - 5.4e-27 94.2 28.5 6.2e-27 94.0 19.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) MFS_1 PF07690.11 gi|518651474|ref|YP_008140994.1| - 6.7e-30 103.9 32.2 3.6e-19 68.6 6.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518651474|ref|YP_008140994.1| - 5.1e-08 31.4 2.7 6.1e-06 24.6 0.0 2.0 2 0 0 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.1 gi|518651474|ref|YP_008140994.1| - 0.064 11.6 38.5 0.038 12.3 6.8 3.1 1 1 1 3 3 3 0 MFS/sugar transport protein UPF0542 PF15086.1 gi|518651474|ref|YP_008140994.1| - 0.081 12.6 1.5 6.5 6.5 0.0 2.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 MFS_1 PF07690.11 gi|518651475|ref|YP_008140995.1| - 1.5e-27 96.2 43.6 2.5e-21 75.8 19.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518651475|ref|YP_008140995.1| - 0.00025 19.2 15.6 0.00063 17.9 5.6 2.0 1 1 1 2 2 2 2 Transmembrane secretion effector Glu_synthase PF01645.12 gi|518651476|ref|YP_008140996.1| - 6.1e-96 321.5 2.4 1.4e-92 310.4 2.2 2.3 2 0 0 2 2 2 2 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|518651476|ref|YP_008140996.1| - 1.6e-10 40.3 4.9 1.5e-05 24.0 1.0 4.1 4 0 0 4 4 4 4 FMN-dependent dehydrogenase Glu_syn_central PF04898.9 gi|518651476|ref|YP_008140996.1| - 2e-06 27.3 0.2 9.3e-05 21.8 0.0 3.0 3 1 0 3 3 3 1 Glutamate synthase central domain IMPDH PF00478.20 gi|518651476|ref|YP_008140996.1| - 0.014 14.2 1.8 0.36 9.6 0.9 2.6 3 0 0 3 3 3 0 IMP dehydrogenase / GMP reductase domain GXGXG PF01493.14 gi|518651477|ref|YP_008140997.1| - 7.7e-23 80.5 12.6 1.3e-20 73.2 8.7 2.4 1 1 0 1 1 1 1 GXGXG motif GATase_6 PF13522.1 gi|518651477|ref|YP_008140997.1| - 3.9e-15 55.9 0.0 1.1e-14 54.5 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|518651477|ref|YP_008140997.1| - 8.3e-11 41.1 0.0 3.2e-10 39.2 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|518651477|ref|YP_008140997.1| - 3.1e-08 33.3 0.0 1.4e-07 31.3 0.0 2.0 2 1 0 2 2 2 1 Glutamine amidotransferase domain Gln-synt_C PF00120.19 gi|518651478|ref|YP_008140998.1| - 9.1e-88 293.7 0.0 1.2e-87 293.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|518651478|ref|YP_008140998.1| - 6.3e-22 76.9 0.1 1.6e-21 75.6 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain PEPcase_2 PF14010.1 gi|518651479|ref|YP_008140999.1| - 5.9e-181 602.0 1.7 6.6e-181 601.9 1.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Ammonium_transp PF00909.16 gi|518651480|ref|YP_008141000.1| - 1.7e-88 296.7 31.0 2e-88 296.5 21.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF2075 PF09848.4 gi|518651481|ref|YP_008141001.1| - 1.6e-55 188.5 0.0 2e-55 188.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|518651481|ref|YP_008141001.1| - 0.0063 16.2 0.0 0.024 14.3 0.0 1.9 2 0 0 2 2 2 1 Part of AAA domain AAA_22 PF13401.1 gi|518651481|ref|YP_008141001.1| - 0.021 14.9 0.0 0.051 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|518651481|ref|YP_008141001.1| - 0.03 14.2 0.0 0.056 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.12 gi|518651481|ref|YP_008141001.1| - 0.032 13.6 0.0 0.07 12.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_25 PF13481.1 gi|518651481|ref|YP_008141001.1| - 0.052 12.9 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|518651481|ref|YP_008141001.1| - 0.11 12.0 0.2 0.2 11.1 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Viral_helicase1 PF01443.13 gi|518651481|ref|YP_008141001.1| - 0.12 11.9 0.1 0.3 10.5 0.0 1.7 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase MFS_1 PF07690.11 gi|518651482|ref|YP_008141002.1| - 6.3e-31 107.3 62.7 1.6e-25 89.5 24.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518651482|ref|YP_008141002.1| - 8.9e-19 67.1 34.9 1.2e-18 66.7 24.2 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_3 PF05977.8 gi|518651482|ref|YP_008141002.1| - 0.0018 16.5 6.3 0.0048 15.0 4.4 1.6 1 1 0 1 1 1 1 Transmembrane secretion effector ATG22 PF11700.3 gi|518651482|ref|YP_008141002.1| - 0.04 12.3 36.3 0.15 10.5 25.2 2.1 1 1 0 1 1 1 0 Vacuole effluxer Atg22 like MFS_1 PF07690.11 gi|518651483|ref|YP_008141003.1| - 2e-30 105.7 46.8 2.2e-20 72.6 13.6 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518651483|ref|YP_008141003.1| - 3.5e-19 68.5 30.1 3.5e-19 68.5 20.9 1.8 1 1 1 2 2 2 1 MFS/sugar transport protein Sugar_tr PF00083.19 gi|518651483|ref|YP_008141003.1| - 7.3e-06 24.8 38.8 2e-05 23.3 10.9 3.3 2 1 1 3 3 3 3 Sugar (and other) transporter DUF4325 PF14213.1 gi|518651483|ref|YP_008141003.1| - 0.0019 17.8 0.9 0.0039 16.8 0.2 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4325) ATG22 PF11700.3 gi|518651483|ref|YP_008141003.1| - 0.003 16.0 34.6 0.12 10.8 24.0 2.1 1 1 0 1 1 1 1 Vacuole effluxer Atg22 like PUCC PF03209.10 gi|518651483|ref|YP_008141003.1| - 0.0036 16.0 19.9 0.32 9.6 13.8 2.9 1 1 0 1 1 1 1 PUCC protein TPR_11 PF13414.1 gi|518651484|ref|YP_008141004.1| - 9.9e-56 185.3 25.9 2.9e-14 52.4 0.6 5.2 4 1 1 5 5 5 5 TPR repeat TPR_2 PF07719.12 gi|518651484|ref|YP_008141004.1| - 1.1e-39 131.0 27.7 2e-05 24.1 0.1 9.4 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_1 PF00515.23 gi|518651484|ref|YP_008141004.1| - 7e-36 120.3 41.7 2.9e-07 29.8 1.5 9.5 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|518651484|ref|YP_008141004.1| - 2.1e-30 104.7 2.9 3.7e-07 30.6 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|518651484|ref|YP_008141004.1| - 4.7e-24 84.1 25.6 5.4e-09 35.8 1.6 7.0 2 1 6 8 8 8 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|518651484|ref|YP_008141004.1| - 1.1e-20 73.7 8.4 0.00046 20.4 0.1 6.6 4 3 3 7 7 7 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|518651484|ref|YP_008141004.1| - 3.1e-17 61.2 15.2 4.1e-05 23.4 0.0 8.6 6 2 2 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|518651484|ref|YP_008141004.1| - 4.7e-17 60.4 46.1 0.00085 18.9 0.4 9.9 8 2 2 10 10 10 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518651484|ref|YP_008141004.1| - 2.1e-15 55.7 2.5 0.41 11.4 0.1 8.3 3 1 5 8 8 8 4 Tetratricopeptide repeat Apc3 PF12895.2 gi|518651484|ref|YP_008141004.1| - 4.2e-13 49.2 11.1 0.002 18.2 0.0 5.3 1 1 5 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.1 gi|518651484|ref|YP_008141004.1| - 7.2e-12 44.9 0.1 0.0022 17.7 0.3 4.6 1 1 5 6 6 6 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|518651484|ref|YP_008141004.1| - 9.6e-11 40.6 8.1 0.028 14.2 0.1 7.5 9 0 0 9 9 8 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|518651484|ref|YP_008141004.1| - 3.6e-09 36.4 19.7 0.56 10.7 0.1 7.3 7 0 0 7 7 7 3 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|518651484|ref|YP_008141004.1| - 7.1e-08 31.5 2.6 4.2 6.7 0.0 6.0 6 0 0 6 6 6 3 SHNi-TPR TPR_21 PF09976.4 gi|518651484|ref|YP_008141004.1| - 2.4e-05 24.2 3.6 0.47 10.3 0.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat MIT PF04212.13 gi|518651484|ref|YP_008141004.1| - 0.00053 19.8 14.5 0.045 13.6 0.3 5.8 5 2 2 7 7 6 2 MIT (microtubule interacting and transport) domain NARP1 PF12569.3 gi|518651484|ref|YP_008141004.1| - 0.0006 18.7 9.3 0.41 9.3 0.2 3.7 1 1 1 4 4 4 2 NMDA receptor-regulated protein 1 TPR_10 PF13374.1 gi|518651484|ref|YP_008141004.1| - 0.038 13.9 9.9 1.4 8.9 0.1 5.3 5 0 0 5 5 5 0 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|518651484|ref|YP_008141004.1| - 0.079 12.7 0.0 1.9 8.3 0.0 3.0 3 1 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region DUF3856 PF12968.2 gi|518651484|ref|YP_008141004.1| - 0.08 12.7 2.0 18 5.1 0.1 3.5 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.1 gi|518651484|ref|YP_008141004.1| - 3.3 7.6 10.3 4.3 7.3 0.1 4.8 4 2 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat DUF2080 PF09853.4 gi|518651485|ref|YP_008141005.1| - 4.7e-14 51.8 0.3 5e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) DUF488 PF04343.8 gi|518651486|ref|YP_008141006.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 PEPCK PF00821.13 gi|518651487|ref|YP_008141007.1| - 2.4e-208 693.0 0.1 2.8e-208 692.8 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase Peptidase_S9 PF00326.16 gi|518651488|ref|YP_008141008.1| - 8.8e-49 165.6 0.5 1.4e-48 164.9 0.4 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_5 PF12695.2 gi|518651488|ref|YP_008141008.1| - 2.9e-11 43.3 0.0 4.5e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.13 gi|518651488|ref|YP_008141008.1| - 6.1e-11 42.0 0.1 1.8e-10 40.5 0.0 1.7 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_6 PF12697.2 gi|518651488|ref|YP_008141008.1| - 1.2e-09 38.3 0.0 7.7e-08 32.4 0.0 2.1 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.13 gi|518651488|ref|YP_008141008.1| - 9.5e-07 28.5 0.2 0.024 14.0 0.2 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.11 gi|518651488|ref|YP_008141008.1| - 6.5e-06 25.7 0.4 0.00031 20.2 0.0 2.4 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase BAAT_C PF08840.6 gi|518651488|ref|YP_008141008.1| - 2.1e-05 24.3 0.0 0.12 12.0 0.0 2.4 1 1 1 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.8 gi|518651488|ref|YP_008141008.1| - 7.5e-05 22.3 0.1 0.0029 17.2 0.1 2.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2920 PF11144.3 gi|518651488|ref|YP_008141008.1| - 0.0012 17.9 0.3 0.019 14.0 0.4 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2920) Abhydrolase_1 PF00561.15 gi|518651488|ref|YP_008141008.1| - 0.0093 15.5 0.3 1.4 8.4 0.1 2.3 1 1 0 2 2 2 1 alpha/beta hydrolase fold Peptidase_S10 PF00450.17 gi|518651488|ref|YP_008141008.1| - 0.012 14.8 0.1 0.67 9.0 0.0 2.3 2 0 0 2 2 2 0 Serine carboxypeptidase AXE1 PF05448.7 gi|518651488|ref|YP_008141008.1| - 0.02 13.4 0.5 0.24 9.8 0.3 2.5 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) PhoPQ_related PF10142.4 gi|518651488|ref|YP_008141008.1| - 0.031 12.7 2.8 0.061 11.8 0.5 2.0 2 0 0 2 2 2 0 PhoPQ-activated pathogenicity-related protein Abhydrolase_4 PF08386.5 gi|518651488|ref|YP_008141008.1| - 0.085 12.7 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 TAP-like protein Methyltransf_11 PF08241.7 gi|518651489|ref|YP_008141009.1| - 2.8e-12 46.9 0.0 3.9e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518651489|ref|YP_008141009.1| - 3e-08 33.5 0.0 3.2e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518651489|ref|YP_008141009.1| - 1.8e-06 28.1 0.0 2.6e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518651489|ref|YP_008141009.1| - 5.9e-06 26.6 0.0 8.4e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518651489|ref|YP_008141009.1| - 1.2e-05 24.5 0.1 1.6e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|518651489|ref|YP_008141009.1| - 6.1e-05 22.6 0.0 7.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518651489|ref|YP_008141009.1| - 0.0012 19.4 0.0 0.0016 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|518651489|ref|YP_008141009.1| - 0.0038 16.3 0.0 0.0069 15.4 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.15 gi|518651489|ref|YP_008141009.1| - 0.0067 15.4 0.0 0.0081 15.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.6 gi|518651489|ref|YP_008141009.1| - 0.067 11.8 0.0 0.085 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Peptidase_M13_N PF05649.8 gi|518651491|ref|YP_008141011.1| - 3.3e-92 309.5 0.1 4.7e-92 309.0 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M13 Peptidase_M13 PF01431.16 gi|518651491|ref|YP_008141011.1| - 5.7e-58 195.4 0.0 8.7e-58 194.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M13 DUF973 PF06157.6 gi|518651492|ref|YP_008141012.1| - 4.4e-12 45.5 24.3 6.7e-12 44.9 16.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF973) Tetraspannin PF00335.15 gi|518651492|ref|YP_008141012.1| - 5.1 6.2 20.4 0.33 10.1 10.3 1.8 2 1 0 2 2 2 0 Tetraspanin family Fig1 PF12351.3 gi|518651492|ref|YP_008141012.1| - 8.7 6.1 12.7 0.64 9.8 3.8 2.2 2 0 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 DUF2892 PF11127.3 gi|518651493|ref|YP_008141013.1| - 0.027 14.2 0.1 0.027 14.2 0.1 3.3 3 2 0 3 3 3 0 Protein of unknown function (DUF2892) DDE_Tnp_1 PF01609.16 gi|518651494|ref|YP_008141014.1| - 5.5e-14 52.2 2.2 2e-13 50.3 1.5 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.1 gi|518651494|ref|YP_008141014.1| - 0.013 15.0 1.2 0.016 14.7 0.1 1.7 2 0 0 2 2 2 0 DDE superfamily endonuclease GSH-S_N PF02951.9 gi|518651494|ref|YP_008141014.1| - 0.015 15.0 0.1 0.035 13.8 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain Lipase_GDSL_2 PF13472.1 gi|518651496|ref|YP_008141016.1| - 7.5e-18 65.2 0.0 8.5e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.17 gi|518651496|ref|YP_008141016.1| - 5.4e-11 42.7 0.0 5.1e-10 39.5 0.0 1.9 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Glyco_hydro_1 PF00232.13 gi|518651497|ref|YP_008141017.1| - 1.8e-54 184.6 14.6 2e-50 171.3 5.8 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 1 Regulator_TrmB PF11495.3 gi|518651498|ref|YP_008141018.1| - 2.3e-41 141.2 0.5 2.9e-41 140.9 0.3 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.14 gi|518651498|ref|YP_008141018.1| - 1.9e-19 69.1 0.0 3.6e-19 68.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|518651498|ref|YP_008141018.1| - 0.1 12.2 0.0 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family ABC_tran PF00005.22 gi|518651499|ref|YP_008141019.1| - 6.9e-27 94.4 0.0 1.2e-26 93.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|518651499|ref|YP_008141019.1| - 1.2e-13 51.1 0.0 2.1e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|518651499|ref|YP_008141019.1| - 1e-07 32.2 12.3 4.6e-06 26.8 6.3 2.6 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|518651499|ref|YP_008141019.1| - 0.0019 17.5 4.1 0.014 14.6 2.9 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|518651499|ref|YP_008141019.1| - 0.0035 16.8 0.1 0.0069 15.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SE PF00437.15 gi|518651499|ref|YP_008141019.1| - 0.0046 15.8 0.4 0.0086 15.0 0.0 1.5 2 0 0 2 2 2 1 Type II/IV secretion system protein NB-ARC PF00931.17 gi|518651499|ref|YP_008141019.1| - 0.0049 15.7 0.2 0.025 13.4 0.0 1.9 2 0 0 2 2 2 1 NB-ARC domain ArgK PF03308.11 gi|518651499|ref|YP_008141019.1| - 0.0059 15.4 0.0 0.011 14.4 0.0 1.4 1 0 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|518651499|ref|YP_008141019.1| - 0.006 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|518651499|ref|YP_008141019.1| - 0.0072 16.6 0.2 0.017 15.4 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|518651499|ref|YP_008141019.1| - 0.01 16.6 0.3 0.021 15.6 0.2 1.8 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.21 gi|518651499|ref|YP_008141019.1| - 0.018 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF258 PF03193.11 gi|518651499|ref|YP_008141019.1| - 0.019 14.1 1.3 0.032 13.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF258 PRK PF00485.13 gi|518651499|ref|YP_008141019.1| - 0.022 14.3 0.0 0.032 13.7 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_10 PF12846.2 gi|518651499|ref|YP_008141019.1| - 0.029 13.8 2.4 0.56 9.5 0.7 2.3 1 1 0 2 2 2 0 AAA-like domain AAA_16 PF13191.1 gi|518651499|ref|YP_008141019.1| - 0.03 14.3 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain KAP_NTPase PF07693.9 gi|518651499|ref|YP_008141019.1| - 0.041 12.8 0.0 0.045 12.7 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain DUF87 PF01935.12 gi|518651499|ref|YP_008141019.1| - 0.054 13.2 0.9 0.1 12.4 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function DUF87 AAA_25 PF13481.1 gi|518651499|ref|YP_008141019.1| - 0.069 12.5 0.2 0.3 10.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.15 gi|518651499|ref|YP_008141019.1| - 0.078 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_22 PF13401.1 gi|518651499|ref|YP_008141019.1| - 0.081 13.0 0.7 0.23 11.5 0.5 1.8 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|518651499|ref|YP_008141019.1| - 0.12 12.7 4.5 0.31 11.3 3.3 1.5 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|518651499|ref|YP_008141019.1| - 0.12 12.0 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 NTPase Orthopox_B11R PF07033.6 gi|518651499|ref|YP_008141019.1| - 0.12 11.8 4.5 0.19 11.2 0.8 2.5 2 0 0 2 2 2 0 Orthopoxvirus B11R protein NACHT PF05729.7 gi|518651499|ref|YP_008141019.1| - 0.12 11.9 0.1 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.1 gi|518651499|ref|YP_008141019.1| - 0.24 10.9 1.2 0.66 9.5 0.1 2.1 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.22 gi|518651500|ref|YP_008141020.1| - 4.4e-34 117.7 0.0 6.3e-34 117.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651500|ref|YP_008141020.1| - 2.7e-11 43.9 4.3 7e-05 22.9 0.4 2.3 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|518651500|ref|YP_008141020.1| - 9.2e-06 24.9 9.8 0.0027 16.8 3.2 2.1 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.14 gi|518651500|ref|YP_008141020.1| - 1.5e-05 24.3 0.1 3.8e-05 23.0 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|518651500|ref|YP_008141020.1| - 2e-05 25.0 0.6 2.8e-05 24.5 0.3 1.4 1 1 0 1 1 1 1 AAA domain oligo_HPY PF08352.7 gi|518651500|ref|YP_008141020.1| - 2.5e-05 24.5 0.0 4.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.1 gi|518651500|ref|YP_008141020.1| - 0.00014 22.0 0.9 0.0014 18.8 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|518651500|ref|YP_008141020.1| - 0.00028 20.3 0.0 0.00051 19.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|518651500|ref|YP_008141020.1| - 0.0014 19.4 2.2 0.002 18.9 1.5 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518651500|ref|YP_008141020.1| - 0.0014 18.8 0.1 0.0035 17.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|518651500|ref|YP_008141020.1| - 0.0022 17.8 0.4 0.013 15.4 0.0 2.3 2 1 1 4 4 4 1 AAA domain AAA_10 PF12846.2 gi|518651500|ref|YP_008141020.1| - 0.0033 16.8 0.0 0.042 13.2 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain G-alpha PF00503.15 gi|518651500|ref|YP_008141020.1| - 0.004 15.9 0.0 0.004 15.8 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit AAA_33 PF13671.1 gi|518651500|ref|YP_008141020.1| - 0.014 15.2 0.1 0.094 12.5 0.0 2.2 3 0 0 3 3 3 0 AAA domain NB-ARC PF00931.17 gi|518651500|ref|YP_008141020.1| - 0.023 13.5 0.0 0.038 12.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain PRK PF00485.13 gi|518651500|ref|YP_008141020.1| - 0.027 14.0 0.0 0.051 13.1 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DUF258 PF03193.11 gi|518651500|ref|YP_008141020.1| - 0.035 13.2 0.1 0.052 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|518651500|ref|YP_008141020.1| - 0.045 13.7 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.24 gi|518651500|ref|YP_008141020.1| - 0.046 13.9 0.1 4.7 7.4 0.0 2.3 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.12 gi|518651500|ref|YP_008141020.1| - 0.049 13.4 0.0 0.13 12.0 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF87 MobB PF03205.9 gi|518651500|ref|YP_008141020.1| - 0.065 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_13 PF13166.1 gi|518651500|ref|YP_008141020.1| - 0.13 10.6 5.7 1.7 6.9 0.3 2.4 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|518651500|ref|YP_008141020.1| - 0.15 11.4 0.0 0.4 10.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.17 gi|518651501|ref|YP_008141021.1| - 1e-12 47.9 24.5 1e-12 47.9 17.0 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|518651501|ref|YP_008141021.1| - 6e-05 22.3 0.3 6e-05 22.3 0.2 2.5 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.17 gi|518651502|ref|YP_008141022.1| - 5.6e-41 140.0 13.2 5.6e-41 140.0 9.1 1.7 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.17 gi|518651503|ref|YP_008141023.1| - 3.4e-68 230.1 6.3 5e-68 229.6 4.4 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Haem_oxygenas_2 PF14518.1 gi|518651504|ref|YP_008141024.1| - 3.4e-12 46.4 0.0 5.9e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 Iron-containing redox enzyme TENA_THI-4 PF03070.11 gi|518651504|ref|YP_008141024.1| - 5.1e-08 32.9 0.1 8.1e-08 32.2 0.1 1.3 1 1 0 1 1 1 1 TENA/THI-4/PQQC family DUF3865 PF12981.2 gi|518651504|ref|YP_008141024.1| - 7.2e-08 32.5 0.1 8.6e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Domain of Unknown Function with PDB structure (DUF3865) SHOCT PF09851.4 gi|518651504|ref|YP_008141024.1| - 0.015 14.7 0.1 0.063 12.7 0.1 2.1 1 0 0 1 1 1 0 Short C-terminal domain Peptidase_U4 PF03419.8 gi|518651505|ref|YP_008141025.1| - 0.003 16.6 5.1 0.0032 16.5 3.5 1.0 1 0 0 1 1 1 1 Sporulation factor SpoIIGA YtpI PF14007.1 gi|518651505|ref|YP_008141025.1| - 0.049 13.5 3.4 2.4 8.1 0.0 2.4 2 0 0 2 2 2 0 YtpI-like protein 7TMR-DISM_7TM PF07695.6 gi|518651505|ref|YP_008141025.1| - 0.11 12.1 9.1 0.083 12.5 3.9 2.3 1 1 1 2 2 2 0 7TM diverse intracellular signalling HgmA PF04209.8 gi|518651506|ref|YP_008141026.1| - 2.8e-41 141.2 1.0 3.2e-41 141.1 0.7 1.1 1 0 0 1 1 1 1 homogentisate 1,2-dioxygenase Cupin_2 PF07883.6 gi|518651506|ref|YP_008141026.1| - 0.00019 20.8 0.1 0.0027 17.1 0.0 2.5 3 0 0 3 3 3 1 Cupin domain Cupin_1 PF00190.17 gi|518651506|ref|YP_008141026.1| - 0.0045 16.4 0.0 0.009 15.4 0.0 1.4 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|518651506|ref|YP_008141026.1| - 0.044 13.1 0.0 0.098 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) FAA_hydrolase PF01557.13 gi|518651507|ref|YP_008141027.1| - 8.1e-44 149.6 0.0 9.5e-44 149.4 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Glyoxalase PF00903.20 gi|518651508|ref|YP_008141028.1| - 2e-18 66.5 0.2 6.1e-12 45.6 0.1 2.2 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.1 gi|518651508|ref|YP_008141028.1| - 1e-08 35.1 0.0 0.00052 19.9 0.0 2.7 2 1 1 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.2 gi|518651508|ref|YP_008141028.1| - 3.6e-05 24.3 0.0 0.1 13.2 0.0 2.8 2 1 0 2 2 2 2 Glyoxalase-like domain Glyoxalase_3 PF13468.1 gi|518651508|ref|YP_008141028.1| - 0.029 14.2 0.0 2.5 7.9 0.0 2.3 2 0 0 2 2 2 0 Glyoxalase-like domain AMP-binding PF00501.23 gi|518651509|ref|YP_008141029.1| - 3.5e-48 164.0 0.0 4.3e-48 163.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651509|ref|YP_008141029.1| - 0.00012 22.9 0.0 0.00032 21.5 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Cyclase PF04199.8 gi|518651510|ref|YP_008141030.1| - 4e-30 104.7 0.0 5.5e-30 104.2 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Glycos_transf_2 PF00535.21 gi|518651511|ref|YP_008141031.1| - 1.5e-17 63.7 1.6 2.7e-17 62.9 1.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518651511|ref|YP_008141031.1| - 3.6e-05 23.6 0.0 5.5e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|518651511|ref|YP_008141031.1| - 0.0001 21.4 1.0 0.0001 21.4 0.7 2.0 2 1 1 3 3 3 1 Glycosyltransferase like family 2 Polysacc_synt PF01943.12 gi|518651512|ref|YP_008141032.1| - 2.3e-14 53.3 47.6 2.3e-14 53.3 33.0 3.1 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|518651512|ref|YP_008141032.1| - 1.4e-13 50.9 24.5 1.4e-13 50.9 17.0 4.0 1 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|518651512|ref|YP_008141032.1| - 1.6e-13 50.7 38.7 1.6e-13 50.7 26.8 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein MVIN PF03023.9 gi|518651512|ref|YP_008141032.1| - 1.3e-08 33.7 57.2 1.1e-07 30.6 29.3 2.1 1 1 1 2 2 2 2 MviN-like protein MatE PF01554.13 gi|518651512|ref|YP_008141032.1| - 0.0086 15.7 19.9 0.0086 15.7 13.8 3.7 3 2 1 4 4 4 2 MatE DUF2079 PF09852.4 gi|518651513|ref|YP_008141033.1| - 3.9e-67 226.9 38.5 5.3e-67 226.4 26.7 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) PapC_N PF13954.1 gi|518651513|ref|YP_008141033.1| - 0.068 12.7 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 PapC N-terminal domain DUF2231 PF09990.4 gi|518651513|ref|YP_008141033.1| - 3.8 7.8 13.3 4.7 7.5 0.1 3.9 4 1 1 5 5 5 0 Predicted membrane protein (DUF2231) OCD_Mu_crystall PF02423.10 gi|518651514|ref|YP_008141034.1| - 1.3e-37 129.2 0.0 2.2e-37 128.4 0.0 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family GFO_IDH_MocA PF01408.17 gi|518651514|ref|YP_008141034.1| - 0.00026 21.5 0.0 0.00049 20.6 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Shikimate_DH PF01488.15 gi|518651514|ref|YP_008141034.1| - 0.00059 19.9 0.0 0.001 19.2 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.7 gi|518651514|ref|YP_008141034.1| - 0.044 13.1 0.0 0.11 11.9 0.0 1.6 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain B12-binding PF02310.14 gi|518651515|ref|YP_008141035.1| - 3.7e-19 68.7 0.0 2.8e-18 65.9 0.0 2.1 2 0 0 2 2 2 1 B12 binding domain Radical_SAM PF04055.16 gi|518651515|ref|YP_008141035.1| - 5.8e-19 68.8 0.0 2.1e-18 67.0 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily LigB PF02900.13 gi|518651515|ref|YP_008141035.1| - 0.1 11.5 0.0 0.18 10.7 0.0 1.3 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase Glyco_tran_WecB PF03808.8 gi|518651515|ref|YP_008141035.1| - 0.13 11.6 0.0 7.5 5.9 0.0 2.5 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family DXP_reductoisom PF02670.11 gi|518651515|ref|YP_008141035.1| - 0.14 12.6 0.0 0.78 10.2 0.0 2.3 1 1 1 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase GntR PF00392.16 gi|518651516|ref|YP_008141036.1| - 1.4e-10 40.3 0.0 2.9e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.1 gi|518651516|ref|YP_008141036.1| - 0.012 15.3 0.0 0.021 14.6 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|518651516|ref|YP_008141036.1| - 0.034 13.5 0.0 0.071 12.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding UBA_3 PF09288.5 gi|518651516|ref|YP_008141036.1| - 0.059 12.9 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain Fe_dep_repress PF01325.14 gi|518651516|ref|YP_008141036.1| - 0.12 12.2 0.0 0.29 11.0 0.0 1.6 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain AA_permease_2 PF13520.1 gi|518651517|ref|YP_008141037.1| - 1e-21 77.0 48.9 1e-21 77.0 33.9 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518651517|ref|YP_008141037.1| - 1.3e-12 46.7 48.7 1.3e-12 46.7 33.7 2.0 1 1 1 2 2 2 1 Amino acid permease Pyrophosphatase PF00719.14 gi|518651518|ref|YP_008141038.1| - 3.9e-49 166.0 1.4 4.8e-49 165.8 0.9 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase RNaseH_C PF09293.5 gi|518651518|ref|YP_008141038.1| - 0.021 14.7 0.1 0.027 14.3 0.1 1.3 1 0 0 1 1 1 0 T4 RNase H, C terminal PglZ PF08665.7 gi|518651518|ref|YP_008141038.1| - 0.11 12.1 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 PglZ domain Fe-ADH PF00465.14 gi|518651519|ref|YP_008141039.1| - 2.7e-94 315.8 0.0 3.4e-94 315.4 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|518651519|ref|YP_008141039.1| - 3e-21 75.8 1.7 3.5e-13 49.4 0.1 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|518651519|ref|YP_008141039.1| - 0.016 14.1 0.0 0.42 9.4 0.0 2.3 2 0 0 2 2 2 0 3-dehydroquinate synthase Aldedh PF00171.17 gi|518651520|ref|YP_008141040.1| - 1.1e-168 561.4 0.0 1.2e-168 561.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MT0933_antitox PF14013.1 gi|518651520|ref|YP_008141040.1| - 0.083 13.0 0.5 30 4.8 0.1 3.3 3 0 0 3 3 3 0 MT0933-like antitoxin protein AA_permease PF00324.16 gi|518651521|ref|YP_008141041.1| - 9.8e-30 103.3 47.2 1.1e-29 103.1 32.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651521|ref|YP_008141041.1| - 1.6e-24 86.2 56.8 1.9e-24 85.9 39.3 1.1 1 0 0 1 1 1 1 Amino acid permease ETRAMP PF09716.5 gi|518651521|ref|YP_008141041.1| - 0.45 10.4 5.6 1.7 8.6 0.0 3.3 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) S1FA PF04689.8 gi|518651521|ref|YP_008141041.1| - 7.3 6.5 6.2 24 4.9 0.4 3.1 3 0 0 3 3 3 0 DNA binding protein S1FA Glyco_tranf_2_3 PF13641.1 gi|518651524|ref|YP_008141044.1| - 1.5e-30 106.7 0.0 2e-30 106.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|518651524|ref|YP_008141044.1| - 9e-24 84.2 0.5 9e-24 84.2 0.4 2.4 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 gi|518651524|ref|YP_008141044.1| - 1.1e-15 57.7 0.1 1.6e-15 57.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|518651524|ref|YP_008141044.1| - 5e-12 45.4 0.0 7.7e-12 44.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|518651524|ref|YP_008141044.1| - 1.3e-06 27.7 0.1 1.8e-06 27.2 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.9 gi|518651524|ref|YP_008141044.1| - 3.7e-06 25.5 5.9 0.00044 18.7 2.6 2.9 2 1 1 3 3 3 2 Cellulose synthase Claudin_2 PF13903.1 gi|518651524|ref|YP_008141044.1| - 6.2e-05 22.7 0.7 6.2e-05 22.7 0.5 2.3 2 1 0 2 2 2 1 PMP-22/EMP/MP20/Claudin tight junction NfeD PF01957.13 gi|518651524|ref|YP_008141044.1| - 0.013 15.6 1.1 0.013 15.6 0.8 2.3 2 1 1 3 3 3 0 NfeD-like C-terminal, partner-binding FAM216B PF15107.1 gi|518651524|ref|YP_008141044.1| - 0.045 13.6 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 FAM216B protein family Glyco_tranf_2_4 PF13704.1 gi|518651524|ref|YP_008141044.1| - 0.064 13.5 0.0 0.17 12.1 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase family 2 KaiC PF06745.8 gi|518651525|ref|YP_008141045.1| - 1.6e-38 132.0 0.8 2.5e-38 131.4 0.6 1.3 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|518651525|ref|YP_008141045.1| - 8.1e-07 28.6 0.0 1.7e-06 27.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.10 gi|518651525|ref|YP_008141045.1| - 0.00055 19.0 0.6 0.001 18.2 0.4 1.4 1 1 0 1 1 1 1 Anion-transporting ATPase AAA_22 PF13401.1 gi|518651525|ref|YP_008141045.1| - 0.0098 16.0 0.0 0.016 15.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|518651525|ref|YP_008141045.1| - 0.022 14.4 0.1 0.035 13.8 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase AAA_18 PF13238.1 gi|518651525|ref|YP_008141045.1| - 0.025 14.8 0.6 0.072 13.4 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|518651525|ref|YP_008141045.1| - 0.032 15.0 0.8 0.1 13.4 0.5 2.0 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|518651525|ref|YP_008141045.1| - 0.037 13.4 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC_tran PF00005.22 gi|518651525|ref|YP_008141045.1| - 0.043 14.0 0.3 0.098 12.9 0.2 1.7 1 1 0 1 1 1 0 ABC transporter DnaB_C PF03796.10 gi|518651525|ref|YP_008141045.1| - 0.073 11.9 0.9 0.26 10.1 0.0 2.1 2 1 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_24 PF13479.1 gi|518651525|ref|YP_008141045.1| - 0.095 12.2 3.3 0.29 10.6 0.6 2.2 2 0 0 2 2 2 0 AAA domain Fer4 PF00037.22 gi|518651526|ref|YP_008141046.1| - 4.6e-16 57.6 17.0 4.8e-08 32.2 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|518651526|ref|YP_008141046.1| - 7.1e-15 55.1 34.8 4.1e-09 36.6 8.9 1.7 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518651526|ref|YP_008141046.1| - 8.7e-12 44.3 16.6 6.4e-08 32.1 3.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|518651526|ref|YP_008141046.1| - 2.4e-10 40.4 8.4 4.3e-05 23.6 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518651526|ref|YP_008141046.1| - 3.4e-10 39.5 22.5 4.7e-07 29.5 8.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|518651526|ref|YP_008141046.1| - 1.6e-09 38.3 8.8 2.9e-05 24.7 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|518651526|ref|YP_008141046.1| - 6.8e-09 35.1 14.5 1.7e-05 24.4 2.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518651526|ref|YP_008141046.1| - 1.3e-08 34.5 9.3 2.2e-05 24.2 0.9 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|518651526|ref|YP_008141046.1| - 1.3e-06 28.2 2.9 1.4e-06 28.1 2.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518651526|ref|YP_008141046.1| - 4.3e-05 23.7 6.7 0.044 14.1 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|518651526|ref|YP_008141046.1| - 0.00019 21.5 13.7 0.012 15.8 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|518651526|ref|YP_008141046.1| - 0.00031 20.7 9.8 0.03 14.3 0.9 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|518651526|ref|YP_008141046.1| - 0.00096 19.5 19.0 0.026 15.0 4.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|518651526|ref|YP_008141046.1| - 0.0022 18.5 15.3 0.021 15.4 2.3 2.9 1 1 2 3 3 3 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|518651526|ref|YP_008141046.1| - 0.0088 16.4 14.6 0.22 11.9 1.3 2.9 2 1 1 3 3 3 2 4Fe-4S single cluster domain Imm17 PF15591.1 gi|518651526|ref|YP_008141046.1| - 0.019 14.7 0.1 0.02 14.6 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 17 Fer4_18 PF13746.1 gi|518651526|ref|YP_008141046.1| - 0.11 12.9 15.2 1.1 9.7 2.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Tsg PF04668.7 gi|518651526|ref|YP_008141046.1| - 0.12 12.5 0.4 0.12 12.5 0.3 1.6 1 1 1 2 2 2 0 Twisted gastrulation (Tsg) protein conserved region MafB19-deam PF14437.1 gi|518651526|ref|YP_008141046.1| - 2 8.0 4.4 2.3 7.8 3.0 1.3 1 1 0 1 1 1 0 MafB19-like deaminase FAD_binding_3 PF01494.14 gi|518651527|ref|YP_008141047.1| - 1.7e-15 56.9 0.1 1.6e-13 50.4 0.1 2.7 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|518651527|ref|YP_008141047.1| - 2.6e-13 49.5 0.0 1.9e-07 30.3 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|518651527|ref|YP_008141047.1| - 9.1e-13 48.0 0.0 1.7e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|518651527|ref|YP_008141047.1| - 1.2e-12 47.4 1.7 2.8e-06 26.4 0.0 3.2 2 2 1 4 4 4 2 FAD binding domain Pyr_redox_2 PF07992.9 gi|518651527|ref|YP_008141047.1| - 2e-09 37.6 0.1 9.4e-09 35.4 0.1 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|518651527|ref|YP_008141047.1| - 3.2e-09 35.9 0.0 9.4e-06 24.5 0.0 2.1 1 1 1 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.7 gi|518651527|ref|YP_008141047.1| - 1.7e-07 30.4 0.0 3.3e-06 26.2 0.0 2.2 2 1 0 2 2 2 1 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|518651527|ref|YP_008141047.1| - 3.4e-07 30.2 0.7 6.7e-07 29.2 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|518651527|ref|YP_008141047.1| - 9.2e-07 28.0 0.2 3.4e-06 26.1 0.1 1.9 1 1 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|518651527|ref|YP_008141047.1| - 1.4e-06 27.5 0.1 4.7e-06 25.8 0.0 1.9 1 1 0 1 1 1 1 Thi4 family HI0933_like PF03486.9 gi|518651527|ref|YP_008141047.1| - 7.7e-06 24.6 0.6 3.8e-05 22.3 0.0 2.3 2 1 1 3 3 3 1 HI0933-like protein Pyr_redox PF00070.22 gi|518651527|ref|YP_008141047.1| - 0.0031 17.8 0.0 0.026 14.9 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518651527|ref|YP_008141047.1| - 0.018 15.0 0.0 0.11 12.6 0.0 2.1 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|518651527|ref|YP_008141047.1| - 0.033 13.8 2.1 0.91 9.1 0.0 3.2 3 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPSase_L_chain PF00289.17 gi|518651527|ref|YP_008141047.1| - 0.036 14.1 0.0 0.076 13.1 0.0 1.5 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, N-terminal domain AlaDh_PNT_C PF01262.16 gi|518651527|ref|YP_008141047.1| - 0.039 13.5 0.0 0.11 12.0 0.0 1.7 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain SE PF08491.5 gi|518651527|ref|YP_008141047.1| - 0.12 11.1 0.0 0.25 10.1 0.0 1.4 1 0 0 1 1 1 0 Squalene epoxidase TPP_enzyme_N PF02776.13 gi|518651528|ref|YP_008141048.1| - 6.6e-43 146.1 0.0 1.2e-42 145.2 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518651528|ref|YP_008141048.1| - 1e-37 129.0 0.1 1.4e-36 125.3 0.0 2.6 2 1 1 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|518651528|ref|YP_008141048.1| - 8e-23 80.7 0.0 1.4e-22 79.8 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.14 gi|518651528|ref|YP_008141048.1| - 0.0024 17.3 0.0 0.0046 16.4 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Peptidase_M55 PF04951.8 gi|518651528|ref|YP_008141048.1| - 0.024 13.8 0.0 0.089 11.9 0.0 1.8 2 0 0 2 2 2 0 D-aminopeptidase SRP54 PF00448.17 gi|518651529|ref|YP_008141049.1| - 4.9e-63 212.1 0.4 9.8e-63 211.1 0.3 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|518651529|ref|YP_008141049.1| - 3.8e-26 91.3 1.2 2e-24 85.8 0.0 3.3 3 0 0 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.14 gi|518651529|ref|YP_008141049.1| - 1.4e-15 57.1 1.3 1.4e-15 57.1 0.9 3.7 3 2 1 4 4 4 1 SRP54-type protein, helical bundle domain SRPRB PF09439.5 gi|518651529|ref|YP_008141049.1| - 0.00022 20.5 5.9 0.002 17.3 0.0 3.3 3 0 0 3 3 3 1 Signal recognition particle receptor beta subunit cobW PF02492.14 gi|518651529|ref|YP_008141049.1| - 0.0038 16.7 2.3 0.013 15.0 1.6 1.8 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA PF00004.24 gi|518651529|ref|YP_008141049.1| - 0.0059 16.8 4.5 0.83 9.8 0.3 4.1 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) ArgK PF03308.11 gi|518651529|ref|YP_008141049.1| - 0.0078 15.0 2.3 0.57 8.9 0.0 3.1 3 0 0 3 3 3 1 ArgK protein MxiH PF09392.5 gi|518651529|ref|YP_008141049.1| - 0.019 15.5 0.5 1.8 9.1 0.0 2.6 2 0 0 2 2 2 0 Type III secretion needle MxiH like APS_kinase PF01583.15 gi|518651529|ref|YP_008141049.1| - 0.019 14.5 0.0 0.045 13.4 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_18 PF13238.1 gi|518651529|ref|YP_008141049.1| - 0.033 14.4 2.8 0.068 13.4 0.9 2.4 2 1 0 2 2 2 0 AAA domain 6PF2K PF01591.13 gi|518651529|ref|YP_008141049.1| - 0.041 12.9 0.0 0.086 11.9 0.0 1.6 1 0 0 1 1 1 0 6-phosphofructo-2-kinase T4SS PF07996.6 gi|518651529|ref|YP_008141049.1| - 0.046 13.5 1.5 0.1 12.4 0.3 2.0 2 0 0 2 2 2 0 Type IV secretion system proteins HHH_5 PF14520.1 gi|518651529|ref|YP_008141049.1| - 0.077 13.1 0.1 1.5 9.0 0.0 3.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain CbiA PF01656.18 gi|518651529|ref|YP_008141049.1| - 0.082 12.3 3.4 0.051 12.9 0.5 2.3 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Occludin_ELL PF07303.8 gi|518651529|ref|YP_008141049.1| - 0.093 13.4 3.0 0.3 11.8 0.9 2.6 2 0 0 2 2 2 0 Occludin homology domain AAA_17 PF13207.1 gi|518651529|ref|YP_008141049.1| - 0.13 13.0 2.1 0.25 12.1 0.3 2.5 2 2 0 2 2 2 0 AAA domain H-kinase_dim PF02895.9 gi|518651529|ref|YP_008141049.1| - 0.17 12.2 2.9 0.62 10.4 0.0 3.1 4 1 0 4 4 3 0 Signal transducing histidine kinase, homodimeric domain AF0941-like PF14591.1 gi|518651529|ref|YP_008141049.1| - 3.2 7.8 10.1 1.4 9.0 0.1 3.4 4 0 0 4 4 4 0 AF0941-like TFIIS_C PF01096.13 gi|518651530|ref|YP_008141050.1| - 6.3e-20 70.5 1.5 6.3e-20 70.5 1.0 3.0 2 1 1 3 3 3 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.2 gi|518651530|ref|YP_008141050.1| - 5.8e-06 26.0 9.0 6.5e-05 22.6 0.7 2.4 2 1 0 2 2 2 1 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|518651530|ref|YP_008141050.1| - 2.5e-05 23.8 1.4 2.5e-05 23.8 1.0 2.5 3 0 0 3 3 2 1 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|518651530|ref|YP_008141050.1| - 5.9e-05 22.7 8.7 0.0029 17.3 0.7 2.6 2 1 0 2 2 2 2 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|518651530|ref|YP_008141050.1| - 6.9e-05 22.4 7.6 0.031 13.9 0.5 2.4 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|518651530|ref|YP_008141050.1| - 0.00017 20.9 11.9 0.51 9.8 0.0 4.0 4 0 0 4 4 4 2 zinc-ribbon domain RRN7 PF11781.3 gi|518651530|ref|YP_008141050.1| - 0.00053 19.4 10.2 0.0045 16.4 0.1 3.2 3 0 0 3 3 3 1 RNA polymerase I-specific transcription initiation factor Rrn7 TF_Zn_Ribbon PF08271.7 gi|518651530|ref|YP_008141050.1| - 0.00054 19.2 13.4 0.049 12.9 2.0 3.5 2 2 0 2 2 2 2 TFIIB zinc-binding DUF4428 PF14471.1 gi|518651530|ref|YP_008141050.1| - 0.0023 17.6 1.8 0.0023 17.6 1.3 2.5 3 0 0 3 3 2 1 Domain of unknown function (DUF4428) Cytochrome_C554 PF13435.1 gi|518651530|ref|YP_008141050.1| - 0.0037 17.3 1.5 0.0051 16.8 1.0 1.3 1 0 0 1 1 1 1 Cytochrome c554 and c-prime zf-RING_3 PF14369.1 gi|518651530|ref|YP_008141050.1| - 0.0058 16.6 8.4 0.27 11.2 0.2 3.2 3 0 0 3 3 3 1 zinc-finger Zn_ribbon_recom PF13408.1 gi|518651530|ref|YP_008141050.1| - 0.0061 16.7 6.4 0.023 14.9 0.2 2.4 2 0 0 2 2 2 1 Recombinase zinc beta ribbon domain Desulfoferrod_N PF06397.7 gi|518651530|ref|YP_008141050.1| - 0.013 14.8 4.5 0.3 10.4 0.0 2.9 3 0 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain A2L_zn_ribbon PF08792.5 gi|518651530|ref|YP_008141050.1| - 0.017 14.5 13.3 3 7.4 0.0 4.2 3 1 0 3 3 3 0 A2L zinc ribbon domain zf-NADH-PPase PF09297.6 gi|518651530|ref|YP_008141050.1| - 0.019 14.4 2.3 0.019 14.4 1.6 3.4 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain GATA PF00320.22 gi|518651530|ref|YP_008141050.1| - 0.019 14.2 9.3 0.91 8.9 1.0 3.3 2 2 0 2 2 2 0 GATA zinc finger zf-ribbon_3 PF13248.1 gi|518651530|ref|YP_008141050.1| - 0.023 13.8 16.7 1.6 8.0 3.3 4.0 2 1 1 3 3 3 0 zinc-ribbon domain HypA PF01155.14 gi|518651530|ref|YP_008141050.1| - 0.025 14.2 7.5 0.22 11.2 0.6 2.4 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family FYVE PF01363.16 gi|518651530|ref|YP_008141050.1| - 0.027 14.3 3.8 0.14 12.0 2.7 2.1 1 1 0 1 1 1 0 FYVE zinc finger Prok-RING_1 PF14446.1 gi|518651530|ref|YP_008141050.1| - 0.05 13.3 7.2 0.11 12.1 0.4 3.0 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-C4pol PF14260.1 gi|518651530|ref|YP_008141050.1| - 0.051 13.5 4.3 3.6 7.6 3.0 2.4 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta Zn-ribbon_8 PF09723.5 gi|518651530|ref|YP_008141050.1| - 0.056 13.4 12.9 10 6.1 0.0 4.1 3 1 1 4 4 4 0 Zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|518651530|ref|YP_008141050.1| - 0.068 12.9 8.3 0.1 12.4 0.3 3.0 2 1 0 2 2 2 0 zinc-ribbons zf-C3HC4_3 PF13920.1 gi|518651530|ref|YP_008141050.1| - 0.11 12.2 8.6 1.4 8.6 3.2 3.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FdhE PF04216.7 gi|518651530|ref|YP_008141050.1| - 0.11 12.2 6.2 0.051 13.2 2.4 1.8 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation DUF1610 PF07754.6 gi|518651530|ref|YP_008141050.1| - 0.13 12.3 0.8 0.13 12.3 0.6 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF1610) zf-nanos PF05741.8 gi|518651530|ref|YP_008141050.1| - 0.16 11.9 6.5 7.3 6.6 0.0 3.4 3 1 0 3 3 3 0 Nanos RNA binding domain Terminase_GpA PF05876.7 gi|518651530|ref|YP_008141050.1| - 0.25 9.6 4.6 0.07 11.4 0.6 1.8 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) zf-Sec23_Sec24 PF04810.10 gi|518651530|ref|YP_008141050.1| - 0.26 10.9 8.4 11 5.6 1.7 3.9 3 1 0 3 3 3 0 Sec23/Sec24 zinc finger Rubredoxin PF00301.15 gi|518651530|ref|YP_008141050.1| - 0.32 10.8 11.3 9.5 6.1 1.7 4.1 3 2 0 3 3 3 0 Rubredoxin YhfH PF14149.1 gi|518651530|ref|YP_008141050.1| - 0.4 10.4 5.6 18 5.2 0.2 3.2 2 1 1 3 3 3 0 YhfH-like protein zf-RING_5 PF14634.1 gi|518651530|ref|YP_008141050.1| - 0.46 10.2 10.7 43 3.9 4.9 3.4 2 1 0 2 2 2 0 zinc-RING finger domain TerY-C PF15616.1 gi|518651530|ref|YP_008141050.1| - 0.51 10.2 8.1 3 7.7 0.7 2.5 1 1 1 2 2 2 0 TerY-C metal binding domain Nudix_N_2 PF14803.1 gi|518651530|ref|YP_008141050.1| - 0.56 9.9 16.6 2.5 7.8 3.1 4.0 3 1 0 3 3 3 0 Nudix N-terminal FYVE_2 PF02318.11 gi|518651530|ref|YP_008141050.1| - 0.64 9.9 4.5 4.2 7.3 0.1 2.2 1 1 1 2 2 2 0 FYVE-type zinc finger zinc_ribbon_5 PF13719.1 gi|518651530|ref|YP_008141050.1| - 0.69 9.5 10.1 3.3 7.3 0.2 4.0 3 1 0 3 3 3 0 zinc-ribbon domain Cytochrome_C7 PF14522.1 gi|518651530|ref|YP_008141050.1| - 0.69 9.5 6.2 3 7.5 3.7 2.2 1 1 0 1 1 1 0 Cytochrome c7 zinc_ribbon_4 PF13717.1 gi|518651530|ref|YP_008141050.1| - 0.69 9.6 10.6 3.4 7.4 0.2 4.1 4 0 0 4 4 4 0 zinc-ribbon domain RecR PF02132.10 gi|518651530|ref|YP_008141050.1| - 0.95 8.9 9.9 0.55 9.7 0.8 3.2 3 0 0 3 3 3 0 RecR protein Rpr2 PF04032.11 gi|518651530|ref|YP_008141050.1| - 1 9.2 9.3 1e+02 2.8 6.4 2.9 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-Mss51 PF13824.1 gi|518651530|ref|YP_008141050.1| - 1.1 9.2 8.6 0.73 9.7 0.6 2.5 2 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 GFA PF04828.9 gi|518651530|ref|YP_008141050.1| - 1.1 9.2 11.2 5.6 6.9 0.0 3.6 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme Ribosomal_L32p PF01783.18 gi|518651530|ref|YP_008141050.1| - 1.1 9.4 6.8 7.2 6.8 0.1 3.3 2 1 1 3 3 3 0 Ribosomal L32p protein family zf-dskA_traR PF01258.12 gi|518651530|ref|YP_008141050.1| - 1.2 8.9 0.1 1.2 8.9 0.0 3.8 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger ZZ PF00569.12 gi|518651530|ref|YP_008141050.1| - 1.6 8.3 10.8 1.3 8.6 0.1 3.6 4 0 0 4 4 4 0 Zinc finger, ZZ type zf-CHY PF05495.7 gi|518651530|ref|YP_008141050.1| - 1.6 8.9 10.6 9.2 6.5 1.0 2.9 1 1 1 2 2 2 0 CHY zinc finger DNA_RNApol_7kD PF03604.8 gi|518651530|ref|YP_008141050.1| - 1.8 8.0 13.9 4.3 6.8 0.3 3.6 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-HIT PF04438.11 gi|518651530|ref|YP_008141050.1| - 1.8 8.2 14.8 3.5 7.3 2.2 3.4 3 1 0 3 3 3 0 HIT zinc finger DnaJ_CXXCXGXG PF00684.14 gi|518651530|ref|YP_008141050.1| - 1.9 8.5 7.5 8.3 6.5 0.5 2.7 2 1 0 2 2 2 0 DnaJ central domain PhnA_Zn_Ribbon PF08274.7 gi|518651530|ref|YP_008141050.1| - 2.1 8.1 19.3 4.8 7.0 2.0 3.9 2 2 2 4 4 4 0 PhnA Zinc-Ribbon zf-C2HC5 PF06221.8 gi|518651530|ref|YP_008141050.1| - 2.7 7.7 5.6 2.2 8.1 0.7 2.7 3 0 0 3 3 3 0 Putative zinc finger motif, C2HC5-type zf-C2H2_4 PF13894.1 gi|518651530|ref|YP_008141050.1| - 2.9 8.4 7.7 40 4.8 0.0 3.9 4 0 0 4 4 4 0 C2H2-type zinc finger DUF2387 PF09526.5 gi|518651530|ref|YP_008141050.1| - 3 7.8 5.5 0.71 9.8 0.3 2.3 2 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) Lar_restr_allev PF14354.1 gi|518651530|ref|YP_008141050.1| - 3.9 7.8 10.8 6.5 7.1 1.1 3.1 1 1 1 2 2 2 0 Restriction alleviation protein Lar Cytochrom_c3_2 PF14537.1 gi|518651530|ref|YP_008141050.1| - 4.7 7.6 7.5 43 4.5 5.3 2.2 1 1 0 1 1 1 0 Cytochrome c3 DUF2296 PF10058.4 gi|518651530|ref|YP_008141050.1| - 5.1 6.9 12.4 2.7 7.8 1.3 3.1 2 2 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Auto_anti-p27 PF06677.7 gi|518651530|ref|YP_008141050.1| - 5.4 6.8 12.7 3.2 7.5 1.3 3.4 3 1 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-IS66 PF13005.2 gi|518651530|ref|YP_008141050.1| - 6.4 6.8 14.5 32 4.6 0.2 4.1 2 2 2 4 4 4 0 zinc-finger binding domain of transposase IS66 IBR PF01485.16 gi|518651530|ref|YP_008141050.1| - 8.8 6.2 12.1 93 3.0 4.4 3.2 1 1 1 2 2 2 0 IBR domain zf-TFIIB PF13453.1 gi|518651530|ref|YP_008141050.1| - 9.8 5.4 10.6 3.7 6.8 1.1 3.1 2 2 0 2 2 2 0 Transcription factor zinc-finger CoA_binding_2 PF13380.1 gi|518651531|ref|YP_008141051.1| - 4.6e-34 117.0 0.1 5.3e-34 116.8 0.1 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.14 gi|518651531|ref|YP_008141051.1| - 0.00029 21.2 0.0 0.00041 20.7 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain adh_short_C2 PF13561.1 gi|518651532|ref|YP_008141052.1| - 1.2e-16 61.1 0.1 3.5e-16 59.6 0.0 1.6 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|518651532|ref|YP_008141052.1| - 9.7e-13 48.3 0.0 1.2e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|518651532|ref|YP_008141052.1| - 0.029 14.0 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 KR domain Saccharop_dh PF03435.13 gi|518651532|ref|YP_008141052.1| - 0.072 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase ApbA PF02558.11 gi|518651532|ref|YP_008141052.1| - 0.082 12.3 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF1776 PF08643.5 gi|518651532|ref|YP_008141052.1| - 0.09 11.9 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) AA_permease PF00324.16 gi|518651533|ref|YP_008141053.1| - 2.7e-22 78.7 58.5 3.5e-22 78.3 40.5 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651533|ref|YP_008141053.1| - 1.6e-20 73.0 64.3 2.2e-20 72.6 44.6 1.1 1 0 0 1 1 1 1 Amino acid permease CBS PF00571.23 gi|518651533|ref|YP_008141053.1| - 4.8e-13 48.6 1.5 1.3e-06 28.0 0.1 2.7 2 0 0 2 2 2 2 CBS domain DUF2951 PF11166.3 gi|518651533|ref|YP_008141053.1| - 0.041 13.7 0.0 0.13 12.1 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) PspB PF06667.7 gi|518651533|ref|YP_008141053.1| - 1.1 9.2 3.2 5.7 6.9 0.2 3.2 3 0 0 3 3 3 0 Phage shock protein B UPF0051 PF01458.12 gi|518651534|ref|YP_008141054.1| - 1.4e-55 188.2 0.3 1.9e-55 187.8 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.12 gi|518651535|ref|YP_008141055.1| - 1.7e-57 194.5 0.1 1.6e-54 184.8 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized protein family (UPF0051) LAGLIDADG_3 PF14528.1 gi|518651535|ref|YP_008141055.1| - 5.3e-09 36.1 6.3 4.1e-05 23.7 0.3 2.8 2 0 0 2 2 2 2 LAGLIDADG-like domain ABC_tran PF00005.22 gi|518651536|ref|YP_008141056.1| - 2.6e-22 79.5 0.0 3.5e-22 79.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651536|ref|YP_008141056.1| - 2.6e-12 47.3 1.1 7.2e-12 45.8 0.8 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|518651536|ref|YP_008141056.1| - 6.1e-08 32.1 1.8 6.3e-07 28.8 1.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|518651536|ref|YP_008141056.1| - 0.0018 17.4 0.0 0.0032 16.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|518651536|ref|YP_008141056.1| - 0.0018 17.7 0.1 0.0037 16.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.24 gi|518651536|ref|YP_008141056.1| - 0.0049 17.0 1.4 0.14 12.3 1.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MutS_V PF00488.16 gi|518651536|ref|YP_008141056.1| - 0.0084 15.5 0.1 2.3 7.5 0.0 2.1 2 0 0 2 2 2 2 MutS domain V AAA_23 PF13476.1 gi|518651536|ref|YP_008141056.1| - 0.02 15.1 0.1 0.039 14.2 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|518651536|ref|YP_008141056.1| - 0.027 14.6 1.3 0.42 10.7 0.9 2.2 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|518651536|ref|YP_008141056.1| - 0.039 13.8 0.4 4.7 7.1 0.0 2.5 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|518651536|ref|YP_008141056.1| - 0.13 12.1 0.1 0.27 11.0 0.1 1.6 1 1 1 2 2 2 0 AAA domain PadR PF03551.9 gi|518651537|ref|YP_008141057.1| - 2.5e-05 23.9 0.1 4.8e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_9 PF08221.6 gi|518651537|ref|YP_008141057.1| - 0.00045 20.0 0.1 0.023 14.5 0.0 2.4 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain ArsR PF09824.4 gi|518651537|ref|YP_008141057.1| - 0.00056 19.2 1.4 0.0011 18.3 0.9 1.5 1 1 0 1 1 1 1 ArsR transcriptional regulator TFIIE_alpha PF02002.12 gi|518651537|ref|YP_008141057.1| - 0.0021 17.5 0.9 0.0037 16.7 0.2 1.7 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_5 PF01022.15 gi|518651537|ref|YP_008141057.1| - 0.0028 17.2 0.1 0.0074 15.9 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_10 PF04967.7 gi|518651537|ref|YP_008141057.1| - 0.0088 15.6 0.1 0.045 13.3 0.0 2.2 2 0 0 2 2 2 1 HTH DNA binding domain HTH_34 PF13601.1 gi|518651537|ref|YP_008141057.1| - 0.011 15.7 0.1 0.025 14.6 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Sulfolobus_pRN PF05584.6 gi|518651537|ref|YP_008141057.1| - 0.029 14.3 0.7 0.15 12.0 0.0 2.1 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein HxlR PF01638.12 gi|518651537|ref|YP_008141057.1| - 0.038 13.6 0.0 0.098 12.3 0.0 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix TrmB PF01978.14 gi|518651537|ref|YP_008141057.1| - 0.042 13.5 0.1 0.12 12.0 0.1 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF650 PF04894.7 gi|518651538|ref|YP_008141058.1| - 5.2e-96 321.3 0.0 6.8e-96 320.9 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|518651538|ref|YP_008141058.1| - 7.9e-36 122.0 0.1 1.4e-35 121.2 0.0 1.4 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) PRF PF06875.6 gi|518651538|ref|YP_008141058.1| - 0.11 11.6 0.0 0.19 10.8 0.0 1.3 1 0 0 1 1 1 0 Plethodontid receptivity factor PRF Radical_SAM PF04055.16 gi|518651539|ref|YP_008141059.1| - 6.7e-11 42.6 0.1 1e-10 42.0 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Gp37_Gp68 PF07505.6 gi|518651539|ref|YP_008141059.1| - 0.019 14.1 0.4 0.06 12.4 0.0 1.9 2 0 0 2 2 2 0 Phage protein Gp37/Gp68 DUF1848 PF08902.6 gi|518651539|ref|YP_008141059.1| - 0.37 10.2 8.1 5 6.5 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1848) FMN_dh PF01070.13 gi|518651540|ref|YP_008141060.1| - 6.6e-120 400.1 0.0 7.7e-120 399.9 0.0 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.9 gi|518651540|ref|YP_008141060.1| - 2.2e-05 23.6 0.0 0.024 13.7 0.0 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG His_biosynth PF00977.16 gi|518651540|ref|YP_008141060.1| - 0.00022 20.5 0.3 0.68 9.1 0.0 2.8 2 1 1 3 3 3 2 Histidine biosynthesis protein IMPDH PF00478.20 gi|518651540|ref|YP_008141060.1| - 0.00082 18.3 0.3 0.0036 16.2 0.0 2.0 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain IGPS PF00218.16 gi|518651540|ref|YP_008141060.1| - 0.0081 15.2 0.0 0.029 13.4 0.0 1.8 1 1 0 1 1 1 1 Indole-3-glycerol phosphate synthase DUF561 PF04481.7 gi|518651540|ref|YP_008141060.1| - 0.055 12.4 0.0 3.9 6.3 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF561) Trp_syntA PF00290.15 gi|518651540|ref|YP_008141060.1| - 0.09 11.2 0.2 0.88 8.0 0.0 2.4 1 1 1 2 2 2 0 Tryptophan synthase alpha chain EAL PF00563.15 gi|518651540|ref|YP_008141060.1| - 0.096 12.1 0.0 9.8 5.5 0.0 2.4 2 0 0 2 2 2 0 EAL domain NMO PF03060.10 gi|518651540|ref|YP_008141060.1| - 0.11 11.6 0.5 0.45 9.6 0.4 2.0 2 1 0 2 2 2 0 Nitronate monooxygenase Glu_synthase PF01645.12 gi|518651540|ref|YP_008141060.1| - 0.15 10.9 0.1 0.56 9.0 0.0 1.7 2 0 0 2 2 2 0 Conserved region in glutamate synthase Glycos_transf_2 PF00535.21 gi|518651541|ref|YP_008141061.1| - 4.7e-19 68.6 0.1 1.1e-18 67.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518651541|ref|YP_008141061.1| - 2.7e-17 63.3 0.0 3.7e-17 62.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|518651541|ref|YP_008141061.1| - 6.2e-11 41.8 0.0 6.2e-10 38.6 0.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.1 gi|518651541|ref|YP_008141061.1| - 1.2e-07 31.6 0.1 1.8e-07 31.0 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Chitin_synth_2 PF03142.10 gi|518651541|ref|YP_008141061.1| - 0.00011 20.7 1.3 0.00037 19.0 0.6 1.9 2 0 0 2 2 2 1 Chitin synthase Osmo_MPGsynth PF09488.5 gi|518651541|ref|YP_008141061.1| - 0.01 14.5 0.4 2.6 6.6 0.0 2.1 1 1 1 2 2 2 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) Glyco_tranf_2_2 PF10111.4 gi|518651541|ref|YP_008141061.1| - 0.025 13.6 0.0 0.043 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Tic20 PF09685.5 gi|518651542|ref|YP_008141062.1| - 2.2e-08 34.0 5.1 2.7e-08 33.7 3.5 1.0 1 0 0 1 1 1 1 Tic20-like protein DUF3188 PF11384.3 gi|518651542|ref|YP_008141062.1| - 0.00079 18.9 1.4 0.0023 17.4 1.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3188) EamA PF00892.15 gi|518651542|ref|YP_008141062.1| - 0.0023 17.9 1.8 0.0023 17.9 1.2 1.9 2 0 0 2 2 2 1 EamA-like transporter family Virul_fac_BrkB PF03631.10 gi|518651542|ref|YP_008141062.1| - 0.017 14.4 7.2 0.022 14.1 5.0 1.0 1 0 0 1 1 1 0 Virulence factor BrkB DUF4134 PF13572.1 gi|518651542|ref|YP_008141062.1| - 0.02 14.9 0.5 0.038 14.1 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4134) AA_permease_C PF13906.1 gi|518651542|ref|YP_008141062.1| - 0.28 11.1 0.1 0.28 11.1 0.1 3.1 3 0 0 3 3 3 0 C-terminus of AA_permease RseC_MucC PF04246.7 gi|518651542|ref|YP_008141062.1| - 0.31 10.5 5.8 0.38 10.3 1.3 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF3278 PF11683.3 gi|518651542|ref|YP_008141062.1| - 0.46 10.4 4.6 0.3 11.0 1.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3278) DUF981 PF06168.6 gi|518651542|ref|YP_008141062.1| - 0.53 10.0 7.3 0.18 11.5 2.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF981) DUF1516 PF07457.6 gi|518651542|ref|YP_008141062.1| - 1.4 9.0 6.6 0.49 10.5 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1516) DUF2306 PF10067.4 gi|518651542|ref|YP_008141062.1| - 2.1 8.5 5.2 2.1 8.5 2.5 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2306) DUF2207 PF09972.4 gi|518651542|ref|YP_008141062.1| - 2.5 6.5 4.2 3.1 6.2 2.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PsbN PF02468.10 gi|518651542|ref|YP_008141062.1| - 7.1 6.3 12.2 2.3 7.9 0.2 3.1 2 1 1 3 3 3 0 Photosystem II reaction centre N protein (psbN) Aminotran_1_2 PF00155.16 gi|518651544|ref|YP_008141064.1| - 2.5e-70 237.2 0.0 2.8e-70 237.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|518651544|ref|YP_008141064.1| - 6.4e-06 25.1 0.0 0.012 14.3 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|518651544|ref|YP_008141064.1| - 0.00049 19.3 0.0 0.00081 18.6 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|518651544|ref|YP_008141064.1| - 0.00077 18.6 0.0 0.0012 18.0 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|518651544|ref|YP_008141064.1| - 0.01 14.1 0.0 0.015 13.6 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Metallophos PF00149.23 gi|518651545|ref|YP_008141065.1| - 1.4e-07 31.0 0.5 1.7e-07 30.8 0.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|518651545|ref|YP_008141065.1| - 3.3e-06 27.0 0.2 7.2e-06 25.9 0.2 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF1647 PF07801.6 gi|518651545|ref|YP_008141065.1| - 0.0096 15.4 1.5 0.027 13.9 0.2 2.2 1 1 2 3 3 3 1 Protein of unknown function (DUF1647) DUF1694 PF07997.6 gi|518651545|ref|YP_008141065.1| - 0.034 14.0 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1694) YcxB PF14317.1 gi|518651545|ref|YP_008141065.1| - 1.3 8.3 3.5 9.6 5.5 0.8 2.8 3 0 0 3 3 3 0 YcxB-like protein Citrate_synt PF00285.16 gi|518651546|ref|YP_008141066.1| - 4.8e-116 387.3 0.0 5.4e-116 387.2 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase Lactamase_B PF00753.22 gi|518651547|ref|YP_008141067.1| - 2e-23 83.0 0.0 2.7e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|518651547|ref|YP_008141067.1| - 7.3e-11 41.9 0.0 9.3e-11 41.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|518651547|ref|YP_008141067.1| - 8.1e-06 25.6 0.0 1.6e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Elong_Iki1 PF10483.4 gi|518651547|ref|YP_008141067.1| - 0.14 11.5 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Elongator subunit Iki1 PDEase_II PF02112.10 gi|518651547|ref|YP_008141067.1| - 1 8.2 2.8 0.99 8.2 1.1 1.5 1 1 1 2 2 2 0 cAMP phosphodiesterases class-II AA_permease PF00324.16 gi|518651548|ref|YP_008141068.1| - 2.5e-59 200.8 53.9 2.9e-59 200.7 37.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651548|ref|YP_008141068.1| - 2.4e-20 72.5 59.4 3.1e-20 72.1 41.2 1.1 1 0 0 1 1 1 1 Amino acid permease ETRAMP PF09716.5 gi|518651548|ref|YP_008141068.1| - 0.00036 20.4 1.2 0.64 10.0 0.1 3.8 3 1 0 3 3 3 2 Malarial early transcribed membrane protein (ETRAMP) Adenosine_kin PF04008.9 gi|518651549|ref|YP_008141069.1| - 1.6e-66 222.6 0.2 1.8e-66 222.4 0.2 1.0 1 0 0 1 1 1 1 Adenosine specific kinase SnoaL_2 PF12680.2 gi|518651550|ref|YP_008141070.1| - 9.2e-10 38.8 0.0 1.2e-09 38.5 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.7 gi|518651550|ref|YP_008141070.1| - 5.8e-08 32.3 0.0 7e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_3 PF13474.1 gi|518651550|ref|YP_008141070.1| - 0.00011 22.1 0.0 0.00016 21.6 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|518651550|ref|YP_008141070.1| - 0.0019 18.4 0.0 0.002 18.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) THDPS_M PF14789.1 gi|518651550|ref|YP_008141070.1| - 0.038 13.9 0.1 4.5 7.2 0.0 2.5 2 0 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase middle MFS_1 PF07690.11 gi|518651551|ref|YP_008141071.1| - 1.9e-37 128.7 50.7 1.2e-24 86.6 19.6 2.8 2 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651551|ref|YP_008141071.1| - 7.9e-11 41.1 24.6 2.8e-10 39.3 10.9 2.3 1 1 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.15 gi|518651551|ref|YP_008141071.1| - 8 4.3 28.1 0.11 10.5 3.7 3.5 2 2 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DDE_Tnp_1 PF01609.16 gi|518651553|ref|YP_008141073.1| - 9.8e-16 57.9 2.2 1.2e-15 57.6 1.5 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518651553|ref|YP_008141073.1| - 6.3e-06 26.0 1.3 0.00012 21.8 0.9 2.2 1 1 0 1 1 1 1 Transposase DDE domain PhoH PF02562.11 gi|518651553|ref|YP_008141073.1| - 0.0072 15.5 0.6 0.022 13.9 0.1 1.9 2 0 0 2 2 2 1 PhoH-like protein La PF05383.12 gi|518651553|ref|YP_008141073.1| - 0.078 12.7 0.0 0.3 10.9 0.0 2.1 1 0 0 1 1 1 0 La domain Transposase_mut PF00872.13 gi|518651554|ref|YP_008141074.1| - 1.9e-63 214.3 0.0 2.6e-63 213.8 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518651554|ref|YP_008141074.1| - 1.1e-09 38.3 0.0 2.3e-09 37.2 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain PNP_UDP_1 PF01048.15 gi|518651555|ref|YP_008141075.1| - 5.1e-21 74.7 0.0 8.2e-21 74.0 0.0 1.2 1 0 0 1 1 1 1 Phosphorylase superfamily SPC22 PF04573.7 gi|518651555|ref|YP_008141075.1| - 0.037 13.2 0.1 0.068 12.3 0.1 1.6 1 0 0 1 1 1 0 Signal peptidase subunit Transposase_mut PF00872.13 gi|518651557|ref|YP_008141077.1| - 9.1e-96 320.6 0.0 1.1e-95 320.4 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518651557|ref|YP_008141077.1| - 2.8e-16 59.4 0.0 5.3e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|518651557|ref|YP_008141077.1| - 0.00018 21.1 0.1 0.0012 18.5 0.0 2.1 2 1 0 3 3 3 1 Transposase DDE_Tnp_IS66 PF03050.9 gi|518651557|ref|YP_008141077.1| - 0.001 18.3 0.0 0.0019 17.5 0.0 1.4 2 0 0 2 2 2 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.1 gi|518651557|ref|YP_008141077.1| - 0.0014 18.5 0.2 0.052 13.5 0.1 2.6 1 1 0 1 1 1 1 DDE domain CKS PF01111.14 gi|518651557|ref|YP_008141077.1| - 0.085 12.7 0.5 96 2.9 0.5 3.4 3 0 0 3 3 3 0 Cyclin-dependent kinase regulatory subunit DAGK_cat PF00781.19 gi|518651559|ref|YP_008141079.1| - 1.8e-11 43.5 0.0 2.7e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain adh_short_C2 PF13561.1 gi|518651560|ref|YP_008141080.1| - 7.9e-31 107.6 0.0 9.9e-31 107.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|518651560|ref|YP_008141080.1| - 1.6e-28 99.7 0.0 2e-28 99.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|518651560|ref|YP_008141080.1| - 1.6e-06 27.8 0.0 2.3e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.14 gi|518651560|ref|YP_008141080.1| - 0.00058 19.0 0.2 0.001 18.2 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.16 gi|518651560|ref|YP_008141080.1| - 0.077 12.4 0.1 1.1 8.6 0.0 2.3 3 0 0 3 3 3 0 NAD dependent epimerase/dehydratase family Fe-ADH PF00465.14 gi|518651561|ref|YP_008141081.1| - 4.3e-94 315.1 0.0 4.9e-94 314.9 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|518651561|ref|YP_008141081.1| - 7.5e-23 81.1 0.1 1.1e-10 41.2 0.2 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|518651561|ref|YP_008141081.1| - 0.014 14.3 0.1 0.78 8.6 0.1 2.5 2 1 0 2 2 2 0 3-dehydroquinate synthase DAO PF01266.19 gi|518651562|ref|YP_008141082.1| - 9.5e-46 156.3 0.0 1.2e-45 156.0 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|518651562|ref|YP_008141082.1| - 1.8e-05 24.6 0.0 4.8e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|518651562|ref|YP_008141082.1| - 2.2e-05 23.5 0.0 0.00011 21.1 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 gi|518651562|ref|YP_008141082.1| - 8.2e-05 21.8 0.0 0.00015 20.9 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.9 gi|518651562|ref|YP_008141082.1| - 0.00023 21.0 0.0 0.00043 20.2 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518651562|ref|YP_008141082.1| - 0.00029 21.1 0.0 0.71 10.3 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|518651562|ref|YP_008141082.1| - 0.00037 19.5 0.0 0.00054 18.9 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.1 gi|518651562|ref|YP_008141082.1| - 0.00043 20.0 0.0 0.00067 19.4 0.0 1.3 1 0 0 1 1 1 1 FAD-NAD(P)-binding Mqo PF06039.10 gi|518651562|ref|YP_008141082.1| - 0.005 15.0 0.0 0.0068 14.6 0.0 1.1 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Pyr_redox_3 PF13738.1 gi|518651562|ref|YP_008141082.1| - 0.0081 16.2 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|518651562|ref|YP_008141082.1| - 0.01 14.4 0.0 0.033 12.8 0.0 1.6 1 1 1 2 2 2 0 Tryptophan halogenase Rep_Org_C PF06926.6 gi|518651562|ref|YP_008141082.1| - 0.036 14.1 0.6 0.099 12.7 0.4 1.8 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus FAD_binding_3 PF01494.14 gi|518651562|ref|YP_008141082.1| - 0.041 12.9 0.0 0.06 12.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.9 gi|518651562|ref|YP_008141082.1| - 0.059 11.8 0.0 0.085 11.3 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein GIDA PF01134.17 gi|518651562|ref|YP_008141082.1| - 0.073 11.9 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A MFS_1 PF07690.11 gi|518651564|ref|YP_008141084.1| - 4.8e-39 134.0 61.5 4.8e-39 134.0 42.6 2.9 2 1 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518651564|ref|YP_008141084.1| - 3.2e-06 25.5 15.5 3.4e-06 25.4 5.1 2.4 2 0 0 2 2 2 2 Transmembrane secretion effector Sugar_tr PF00083.19 gi|518651564|ref|YP_008141084.1| - 0.00039 19.1 13.9 0.00039 19.1 9.6 3.0 3 1 0 3 3 3 2 Sugar (and other) transporter DUF2583 PF10762.4 gi|518651564|ref|YP_008141084.1| - 4.6 7.4 11.5 0.34 11.0 0.1 3.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2583) Acetyltransf_1 PF00583.19 gi|518651565|ref|YP_008141085.1| - 1.9e-11 43.8 0.0 3.2e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|518651565|ref|YP_008141085.1| - 1.4e-05 25.3 0.0 1.9e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|518651565|ref|YP_008141085.1| - 0.0011 19.0 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|518651565|ref|YP_008141085.1| - 0.0036 17.2 0.0 0.0055 16.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|518651565|ref|YP_008141085.1| - 0.055 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.1 gi|518651565|ref|YP_008141085.1| - 0.058 13.3 0.0 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518651565|ref|YP_008141085.1| - 0.1 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_7 PF13508.1 gi|518651565|ref|YP_008141085.1| - 0.11 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TP_methylase PF00590.15 gi|518651566|ref|YP_008141086.1| - 3.1e-31 108.7 0.0 3.6e-31 108.5 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases PEP_mutase PF13714.1 gi|518651567|ref|YP_008141087.1| - 5.7e-56 189.3 0.1 6.6e-56 189.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.16 gi|518651567|ref|YP_008141087.1| - 5.9e-18 64.3 0.5 8.9e-18 63.7 0.3 1.2 1 0 0 1 1 1 1 Isocitrate lyase family Pantoate_transf PF02548.10 gi|518651567|ref|YP_008141087.1| - 0.0018 17.4 0.1 0.0038 16.3 0.0 1.5 1 1 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PhoU PF01895.14 gi|518651567|ref|YP_008141087.1| - 0.32 11.4 3.0 2.2 8.8 0.4 2.6 3 0 0 3 3 3 0 PhoU domain MmgE_PrpD PF03972.9 gi|518651568|ref|YP_008141088.1| - 1.3e-102 343.2 0.0 1.6e-102 343.0 0.0 1.0 1 0 0 1 1 1 1 MmgE/PrpD family DUF929 PF06053.6 gi|518651569|ref|YP_008141089.1| - 4.5e-49 166.7 6.0 5.9e-49 166.4 4.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF929) OppC_N PF12911.2 gi|518651569|ref|YP_008141089.1| - 0.00027 20.2 0.6 0.00062 19.0 0.4 1.6 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C DUF912 PF06024.7 gi|518651569|ref|YP_008141089.1| - 0.066 13.2 0.5 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) Pyr_redox_2 PF07992.9 gi|518651570|ref|YP_008141090.1| - 4.1e-29 101.9 0.6 5.8e-29 101.4 0.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518651570|ref|YP_008141090.1| - 1.2e-11 45.0 0.2 7e-10 39.2 0.0 2.5 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|518651570|ref|YP_008141090.1| - 7e-07 28.6 0.1 3e-06 26.6 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.19 gi|518651570|ref|YP_008141090.1| - 7.6e-07 28.3 1.1 0.0041 16.0 1.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.17 gi|518651570|ref|YP_008141090.1| - 8.6e-06 24.8 2.8 0.00026 19.9 0.2 2.4 2 1 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.12 gi|518651570|ref|YP_008141090.1| - 3e-05 23.2 2.2 0.00037 19.6 0.2 2.5 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.19 gi|518651570|ref|YP_008141090.1| - 0.0001 21.3 4.4 0.00036 19.5 1.4 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox PF00070.22 gi|518651570|ref|YP_008141090.1| - 0.00014 22.2 1.9 0.025 14.9 0.1 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|518651570|ref|YP_008141090.1| - 0.00022 19.8 0.4 0.014 13.8 0.4 2.3 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.14 gi|518651570|ref|YP_008141090.1| - 0.00051 19.2 0.0 0.00076 18.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.1 gi|518651570|ref|YP_008141090.1| - 0.0052 16.7 1.1 0.008 16.1 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.1 gi|518651570|ref|YP_008141090.1| - 0.013 15.7 0.7 1.8 8.8 0.3 2.5 2 1 0 2 2 2 0 Putative NAD(P)-binding Thioredoxin PF00085.15 gi|518651571|ref|YP_008141091.1| - 1.1e-21 76.4 0.0 1.2e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|518651571|ref|YP_008141091.1| - 4.4e-07 30.0 0.1 5.9e-06 26.4 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.1 gi|518651571|ref|YP_008141091.1| - 0.0011 18.4 0.0 0.0013 18.3 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|518651571|ref|YP_008141091.1| - 0.0013 18.8 0.1 0.019 15.0 0.0 1.9 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_3 PF13192.1 gi|518651571|ref|YP_008141091.1| - 0.003 17.3 0.0 0.0039 16.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain DIM1 PF02966.11 gi|518651571|ref|YP_008141091.1| - 0.0068 15.9 0.0 0.0073 15.8 0.0 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 HyaE PF07449.6 gi|518651571|ref|YP_008141091.1| - 0.0081 16.0 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TrbC_Ftype PF09673.5 gi|518651571|ref|YP_008141091.1| - 0.017 14.7 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein DUF953 PF06110.6 gi|518651571|ref|YP_008141091.1| - 0.057 12.8 0.1 0.19 11.1 0.1 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Redoxin PF08534.5 gi|518651571|ref|YP_008141091.1| - 0.11 12.0 0.2 0.2 11.2 0.1 1.6 1 1 0 1 1 1 0 Redoxin TrmB PF01978.14 gi|518651572|ref|YP_008141092.1| - 3.1e-07 29.9 0.1 4.9e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|518651572|ref|YP_008141092.1| - 4.4e-06 26.2 0.0 7.9e-06 25.4 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|518651572|ref|YP_008141092.1| - 3.5e-05 23.4 0.0 6.2e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.12 gi|518651572|ref|YP_008141092.1| - 0.00021 20.7 0.0 0.00029 20.2 0.0 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_IclR PF09339.5 gi|518651572|ref|YP_008141092.1| - 0.00067 19.2 0.0 0.0011 18.4 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.1 gi|518651572|ref|YP_008141092.1| - 0.00068 19.9 0.0 0.00096 19.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_38 PF13936.1 gi|518651572|ref|YP_008141092.1| - 0.012 15.1 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518651572|ref|YP_008141092.1| - 0.015 14.6 0.0 0.04 13.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.11 gi|518651572|ref|YP_008141092.1| - 0.035 14.1 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor GntR PF00392.16 gi|518651572|ref|YP_008141092.1| - 0.098 12.1 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family MoaE PF02391.12 gi|518651573|ref|YP_008141093.1| - 1.2e-34 118.5 3.1 1.6e-34 118.2 2.1 1.0 1 0 0 1 1 1 1 MoaE protein MFS_1 PF07690.11 gi|518651574|ref|YP_008141094.1| - 9.5e-27 93.6 36.9 9.5e-27 93.6 25.6 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651574|ref|YP_008141094.1| - 4.2e-25 88.2 37.4 5.3e-25 87.9 25.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.1 gi|518651574|ref|YP_008141094.1| - 2.1e-14 52.7 28.1 2.8e-10 39.1 7.8 2.2 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_3 PF05977.8 gi|518651574|ref|YP_008141094.1| - 0.59 8.1 9.4 0.014 13.5 1.6 1.9 2 0 0 2 2 2 0 Transmembrane secretion effector FAD-oxidase_C PF02913.14 gi|518651575|ref|YP_008141095.1| - 9e-49 166.0 0.0 1.4e-48 165.3 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.18 gi|518651575|ref|YP_008141095.1| - 6.6e-42 142.2 0.0 1e-41 141.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Fer4_8 PF13183.1 gi|518651576|ref|YP_008141096.1| - 2.3e-11 43.5 2.2 2.3e-11 43.5 1.5 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518651576|ref|YP_008141096.1| - 3e-09 37.0 3.5 3.5e-09 36.8 1.1 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518651576|ref|YP_008141096.1| - 3.2e-09 36.4 4.4 1.8e-08 34.0 3.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain CCG PF02754.11 gi|518651576|ref|YP_008141096.1| - 1.2e-08 34.8 0.1 1.4e-06 28.1 0.1 2.7 2 0 0 2 2 2 1 Cysteine-rich domain Fer4 PF00037.22 gi|518651576|ref|YP_008141096.1| - 2e-08 33.4 14.5 1.3e-05 24.5 2.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|518651576|ref|YP_008141096.1| - 2.2e-08 33.5 12.5 0.00012 21.7 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|518651576|ref|YP_008141096.1| - 3.9e-07 29.6 20.0 0.00012 21.8 1.4 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|518651576|ref|YP_008141096.1| - 1e-06 29.0 9.0 8.3e-06 26.0 6.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|518651576|ref|YP_008141096.1| - 1e-06 29.0 8.4 0.0023 18.3 0.1 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|518651576|ref|YP_008141096.1| - 8.3e-06 25.7 16.3 0.0016 18.6 1.5 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|518651576|ref|YP_008141096.1| - 0.00018 21.7 10.1 0.00018 21.7 7.0 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|518651576|ref|YP_008141096.1| - 0.00037 20.2 11.1 0.0048 16.7 1.1 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|518651576|ref|YP_008141096.1| - 0.057 13.9 0.2 0.057 13.9 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|518651576|ref|YP_008141096.1| - 0.066 13.6 12.1 0.12 12.7 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|518651576|ref|YP_008141096.1| - 0.23 12.2 14.2 0.36 11.5 7.6 2.6 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|518651576|ref|YP_008141096.1| - 0.71 10.5 22.6 0.36 11.4 4.0 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain AA_kinase PF00696.23 gi|518651577|ref|YP_008141097.1| - 8.6e-37 126.9 0.1 1.1e-36 126.6 0.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family Semialdhyde_dh PF01118.19 gi|518651578|ref|YP_008141098.1| - 6.2e-32 110.4 0.0 1e-31 109.7 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|518651578|ref|YP_008141098.1| - 4.2e-25 88.6 0.0 6.2e-25 88.1 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Gp_dh_C PF02800.15 gi|518651578|ref|YP_008141098.1| - 0.0004 19.8 0.0 0.00079 18.9 0.0 1.5 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFO_IDH_MocA PF01408.17 gi|518651578|ref|YP_008141098.1| - 0.00079 19.9 0.0 0.0013 19.2 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.15 gi|518651578|ref|YP_008141098.1| - 0.0034 17.2 0.0 0.0072 16.2 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.1 gi|518651578|ref|YP_008141098.1| - 0.012 15.6 0.0 0.025 14.5 0.0 1.5 1 1 0 1 1 1 0 NADH(P)-binding DXP_reductoisom PF02670.11 gi|518651578|ref|YP_008141098.1| - 0.037 14.5 0.0 0.086 13.3 0.0 1.7 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ldh_1_N PF00056.18 gi|518651578|ref|YP_008141098.1| - 0.047 13.5 0.0 0.09 12.6 0.0 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Arch_ATPase PF01637.13 gi|518651579|ref|YP_008141099.1| - 2.2e-32 112.6 4.6 2.2e-32 112.6 3.2 2.0 2 1 0 2 2 2 1 Archaeal ATPase DUF234 PF03008.9 gi|518651579|ref|YP_008141099.1| - 8.2e-23 80.4 2.6 1.5e-22 79.5 1.1 2.0 2 0 0 2 2 1 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.1 gi|518651579|ref|YP_008141099.1| - 1.6e-09 37.7 1.8 1.6e-09 37.7 1.3 2.1 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|518651579|ref|YP_008141099.1| - 5.6e-07 29.7 0.0 1.1e-06 28.7 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|518651579|ref|YP_008141099.1| - 0.0011 19.0 0.1 0.0026 17.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain Mrr_cat PF04471.7 gi|518651579|ref|YP_008141099.1| - 0.0063 16.3 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 Restriction endonuclease HTH_24 PF13412.1 gi|518651579|ref|YP_008141099.1| - 0.0076 15.6 1.9 0.088 12.2 0.2 3.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|518651579|ref|YP_008141099.1| - 0.0084 15.7 0.0 0.022 14.4 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|518651579|ref|YP_008141099.1| - 0.0097 15.7 2.3 0.011 15.5 0.2 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix NERD PF08378.6 gi|518651579|ref|YP_008141099.1| - 0.017 15.3 0.3 0.047 13.9 0.2 1.8 1 0 0 1 1 1 0 Nuclease-related domain AAA PF00004.24 gi|518651579|ref|YP_008141099.1| - 0.023 14.9 0.0 0.048 13.8 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HTH_5 PF01022.15 gi|518651579|ref|YP_008141099.1| - 0.024 14.2 0.0 0.06 13.0 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Miro PF08477.8 gi|518651579|ref|YP_008141099.1| - 0.067 13.6 0.0 0.16 12.4 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein HTH_34 PF13601.1 gi|518651579|ref|YP_008141099.1| - 0.085 12.9 0.4 0.2 11.6 0.1 1.8 2 0 0 2 2 1 0 Winged helix DNA-binding domain HAD PF12710.2 gi|518651580|ref|YP_008141100.1| - 8e-13 48.9 0.0 9.9e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|518651580|ref|YP_008141100.1| - 3.4e-09 37.4 0.0 1.1e-05 25.9 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|518651580|ref|YP_008141100.1| - 4.5e-08 33.5 0.0 1.9e-07 31.4 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|518651580|ref|YP_008141100.1| - 6.1e-06 25.5 0.1 4.5e-05 22.7 0.1 1.9 1 1 0 1 1 1 1 Putative Phosphatase Hydrolase_3 PF08282.7 gi|518651580|ref|YP_008141100.1| - 5.3e-05 22.9 2.7 0.00012 21.7 0.2 2.3 1 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase AAA_14 PF13173.1 gi|518651580|ref|YP_008141100.1| - 0.059 13.2 0.1 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain tRNA-synt_2b PF00587.20 gi|518651581|ref|YP_008141101.1| - 1.8e-22 79.7 0.1 4.2e-22 78.5 0.1 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|518651581|ref|YP_008141101.1| - 6.7e-19 67.6 0.6 2.1e-18 66.0 0.1 2.1 3 0 0 3 3 3 1 Anticodon binding domain ProRS-C_1 PF09180.6 gi|518651581|ref|YP_008141101.1| - 1.7e-08 34.2 0.1 3.9e-08 33.0 0.1 1.6 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal Pam16 PF03656.8 gi|518651581|ref|YP_008141101.1| - 0.0049 16.6 0.4 0.01 15.6 0.3 1.5 1 0 0 1 1 1 1 Pam16 SLAC1 PF03595.12 gi|518651582|ref|YP_008141102.1| - 1.9e-23 82.6 48.8 2.1e-23 82.5 33.8 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel SurE PF01975.12 gi|518651585|ref|YP_008141105.1| - 1.1e-49 168.4 0.6 1.3e-49 168.1 0.4 1.1 1 0 0 1 1 1 1 Survival protein SurE Dev_Cell_Death PF10539.4 gi|518651585|ref|YP_008141105.1| - 0.081 12.4 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Development and cell death domain ABC_tran PF00005.22 gi|518651586|ref|YP_008141106.1| - 9.6e-22 77.7 0.0 1.5e-21 77.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651586|ref|YP_008141106.1| - 3.8e-12 46.7 0.7 2.3e-05 24.5 0.8 2.6 2 1 1 3 3 3 2 AAA domain AAA_23 PF13476.1 gi|518651586|ref|YP_008141106.1| - 3.9e-05 24.0 0.7 9.2e-05 22.8 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|518651586|ref|YP_008141106.1| - 0.00015 20.9 4.5 0.0004 19.5 3.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|518651586|ref|YP_008141106.1| - 0.00026 20.2 0.1 0.00041 19.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|518651586|ref|YP_008141106.1| - 0.0015 18.7 0.4 0.0063 16.8 0.1 2.0 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|518651586|ref|YP_008141106.1| - 0.0024 17.1 0.1 0.011 14.9 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.1 gi|518651586|ref|YP_008141106.1| - 0.0027 17.7 0.0 0.004 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|518651586|ref|YP_008141106.1| - 0.0044 17.1 0.0 0.0087 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.7 gi|518651586|ref|YP_008141106.1| - 0.0053 16.4 0.1 0.0087 15.7 0.1 1.3 1 0 0 1 1 1 1 NACHT domain MobB PF03205.9 gi|518651586|ref|YP_008141106.1| - 0.0076 15.9 0.2 0.014 15.0 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_13 PF13166.1 gi|518651586|ref|YP_008141106.1| - 0.0078 14.7 1.0 0.025 13.0 0.2 1.8 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|518651586|ref|YP_008141106.1| - 0.011 15.1 0.2 0.022 14.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|518651586|ref|YP_008141106.1| - 0.012 16.3 0.0 0.027 15.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain Miro PF08477.8 gi|518651586|ref|YP_008141106.1| - 0.017 15.6 0.0 0.036 14.5 0.0 1.7 1 0 0 1 1 1 0 Miro-like protein DUF3584 PF12128.3 gi|518651586|ref|YP_008141106.1| - 0.02 12.2 0.1 0.028 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NB-ARC PF00931.17 gi|518651586|ref|YP_008141106.1| - 0.023 13.5 0.0 0.035 12.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.1 gi|518651586|ref|YP_008141106.1| - 0.032 13.8 0.0 0.083 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|518651586|ref|YP_008141106.1| - 0.058 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 T2SE PF00437.15 gi|518651586|ref|YP_008141106.1| - 0.062 12.1 0.1 0.17 10.7 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.14 gi|518651586|ref|YP_008141106.1| - 0.073 12.5 0.1 0.31 10.4 0.1 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRPRB PF09439.5 gi|518651586|ref|YP_008141106.1| - 0.083 12.1 0.1 2.4 7.3 0.0 2.3 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA PF00004.24 gi|518651586|ref|YP_008141106.1| - 0.12 12.5 0.0 0.26 11.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PduV-EutP PF10662.4 gi|518651586|ref|YP_008141106.1| - 0.12 11.8 0.4 0.3 10.5 0.3 1.9 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.18 gi|518651586|ref|YP_008141106.1| - 0.21 11.5 1.4 1.1 9.2 1.0 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC2_membrane PF01061.19 gi|518651587|ref|YP_008141107.1| - 1.3e-10 40.7 24.9 1.3e-10 40.7 17.2 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|518651587|ref|YP_008141107.1| - 3.3 6.6 39.0 4.2 6.2 26.0 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein Mob_synth_C PF06463.8 gi|518651588|ref|YP_008141108.1| - 7.2e-29 100.0 0.4 1.4e-28 99.1 0.3 1.5 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.16 gi|518651588|ref|YP_008141108.1| - 2.8e-27 95.9 0.1 2.8e-27 95.9 0.1 1.6 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|518651588|ref|YP_008141108.1| - 2.1e-10 40.6 0.0 5.2e-10 39.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|518651588|ref|YP_008141108.1| - 5.8e-10 39.4 0.0 1.3e-09 38.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain phage_tail_N PF08400.5 gi|518651588|ref|YP_008141108.1| - 0.074 12.7 0.0 0.26 10.9 0.0 1.8 2 0 0 2 2 2 0 Prophage tail fibre N-terminal Phage_Mu_Gam PF07352.7 gi|518651588|ref|YP_008141108.1| - 0.094 12.2 0.8 0.26 10.7 0.2 1.9 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein ThiS PF02597.15 gi|518651589|ref|YP_008141109.1| - 7.1e-13 48.7 0.0 8.2e-13 48.5 0.0 1.0 1 0 0 1 1 1 1 ThiS family G_glu_transpept PF01019.16 gi|518651590|ref|YP_008141110.1| - 2.9e-95 319.7 0.1 2.2e-94 316.7 0.1 1.9 1 1 0 1 1 1 1 Gamma-glutamyltranspeptidase DUF4382 PF14321.1 gi|518651591|ref|YP_008141111.1| - 7.6e-16 58.4 2.1 9.8e-16 58.0 1.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4382) NVEALA PF14055.1 gi|518651591|ref|YP_008141111.1| - 0.0042 16.7 9.9 1.5 8.6 3.5 3.6 2 1 0 2 2 2 2 NVEALA protein DUF945 PF06097.6 gi|518651591|ref|YP_008141111.1| - 1.6 7.3 13.1 1.4 7.6 1.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF945) DUF2929 PF11151.3 gi|518651591|ref|YP_008141111.1| - 1.8 8.6 6.3 10 6.2 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2929) Oxidored_FMN PF00724.15 gi|518651592|ref|YP_008141112.1| - 8.6e-72 241.9 0.0 1.4e-71 241.2 0.0 1.3 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Pyr_redox_2 PF07992.9 gi|518651592|ref|YP_008141112.1| - 0.00053 19.9 0.0 0.0013 18.6 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|518651592|ref|YP_008141112.1| - 0.017 15.0 0.0 0.052 13.5 0.0 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|518651592|ref|YP_008141112.1| - 0.02 13.8 0.0 0.027 13.3 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase Thi4 PF01946.12 gi|518651592|ref|YP_008141112.1| - 0.025 13.7 0.0 0.047 12.7 0.0 1.4 1 0 0 1 1 1 0 Thi4 family Pyr_redox PF00070.22 gi|518651592|ref|YP_008141112.1| - 0.081 13.3 0.1 0.47 10.8 0.0 2.4 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AIRC PF00731.15 gi|518651593|ref|YP_008141113.1| - 8.1e-67 223.1 1.4 8.9e-67 223.0 0.9 1.0 1 0 0 1 1 1 1 AIR carboxylase ABC_sub_bind PF04392.7 gi|518651593|ref|YP_008141113.1| - 0.017 14.1 0.0 0.026 13.4 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate binding protein Fe-ADH_2 PF13685.1 gi|518651593|ref|YP_008141113.1| - 0.051 12.8 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase ATP-grasp PF02222.17 gi|518651594|ref|YP_008141114.1| - 2.2e-38 131.2 0.0 3.3e-38 130.7 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|518651594|ref|YP_008141114.1| - 6e-06 26.1 0.0 9.2e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain NAD_binding_2 PF03446.10 gi|518651594|ref|YP_008141114.1| - 0.0012 18.6 0.0 0.0024 17.7 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518651594|ref|YP_008141114.1| - 0.0019 17.4 0.0 0.003 16.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 gi|518651594|ref|YP_008141114.1| - 0.12 12.6 0.0 16 5.8 0.0 2.5 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain ACT_7 PF13840.1 gi|518651595|ref|YP_008141115.1| - 0.00064 19.1 0.2 0.0013 18.2 0.1 1.6 1 1 0 1 1 1 1 ACT domain ACT PF01842.20 gi|518651595|ref|YP_008141115.1| - 0.012 15.1 0.1 0.027 13.9 0.1 1.6 1 0 0 1 1 1 0 ACT domain DUF3834 PF12916.2 gi|518651596|ref|YP_008141116.1| - 7.5e-66 220.9 1.2 8.8e-66 220.7 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) SBP_bac_3 PF00497.15 gi|518651596|ref|YP_008141116.1| - 0.0022 17.2 0.0 0.0032 16.7 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF3447 PF11929.3 gi|518651597|ref|YP_008141117.1| - 0.51 10.1 2.5 2.3 8.1 1.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3447) NTP_transf_2 PF01909.18 gi|518651598|ref|YP_008141118.1| - 1.6e-05 25.1 0.1 2.5e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|518651598|ref|YP_008141118.1| - 0.034 13.7 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 HEPN PF05168.9 gi|518651599|ref|YP_008141119.1| - 4.4e-31 107.2 1.3 5.3e-31 106.9 0.9 1.0 1 0 0 1 1 1 1 HEPN domain DUF4398 PF14346.1 gi|518651599|ref|YP_008141119.1| - 0.11 12.6 0.2 0.23 11.5 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4398) CPSase_sm_chain PF00988.17 gi|518651600|ref|YP_008141120.1| - 5.5e-46 155.2 0.1 8.2e-46 154.7 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.23 gi|518651600|ref|YP_008141120.1| - 1.1e-37 129.3 0.0 1.6e-37 128.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|518651600|ref|YP_008141120.1| - 1.2e-09 37.9 0.1 3.1e-07 30.0 0.1 2.2 1 1 0 1 1 1 1 Peptidase C26 CPSase_L_D2 PF02786.12 gi|518651601|ref|YP_008141121.1| - 1.4e-79 266.2 0.0 2e-59 200.4 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|518651601|ref|YP_008141121.1| - 6.1e-39 132.5 0.0 3.8e-18 65.5 0.0 3.0 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, N-terminal domain CPSase_L_D3 PF02787.14 gi|518651601|ref|YP_008141121.1| - 1.3e-33 115.4 0.0 3.7e-33 113.9 0.0 1.9 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp_4 PF13535.1 gi|518651601|ref|YP_008141121.1| - 2.2e-22 79.6 0.0 4.2e-12 46.1 0.0 2.2 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|518651601|ref|YP_008141121.1| - 8.3e-20 70.7 0.0 3.3e-08 32.6 0.0 4.1 3 1 0 3 3 3 3 ATP-grasp in the biosynthetic pathway with Ter operon MGS PF02142.17 gi|518651601|ref|YP_008141121.1| - 2.9e-17 62.3 0.5 2.8e-16 59.2 0.0 2.9 3 0 0 3 3 3 1 MGS-like domain ATP-grasp_3 PF02655.9 gi|518651601|ref|YP_008141121.1| - 2.3e-09 37.3 0.6 0.002 17.9 0.0 2.9 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp PF02222.17 gi|518651601|ref|YP_008141121.1| - 1.7e-08 34.0 0.0 0.002 17.4 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain SufE PF02657.10 gi|518651601|ref|YP_008141121.1| - 0.051 13.2 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 Fe-S metabolism associated domain HhH-GPD PF00730.20 gi|518651602|ref|YP_008141122.1| - 7.4e-18 64.8 0.0 9.5e-18 64.4 0.0 1.1 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|518651602|ref|YP_008141122.1| - 1.3e-05 24.5 0.0 3.5e-05 23.2 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.4 gi|518651602|ref|YP_008141122.1| - 0.0091 16.1 10.3 0.014 15.5 7.1 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III Amidohydro_3 PF07969.6 gi|518651603|ref|YP_008141123.1| - 2.4e-58 198.3 0.0 2.8e-58 198.0 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.15 gi|518651603|ref|YP_008141123.1| - 3.6e-08 33.4 0.5 3e-05 23.8 0.0 2.9 2 2 0 2 2 2 2 Amidohydrolase family Amidohydro_5 PF13594.1 gi|518651603|ref|YP_008141123.1| - 6.4e-08 32.3 0.0 1.8e-07 30.8 0.0 1.8 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|518651603|ref|YP_008141123.1| - 0.00072 19.6 0.0 0.21 11.5 0.0 2.4 2 1 0 2 2 2 2 Amidohydrolase Lactamase_B PF00753.22 gi|518651604|ref|YP_008141124.1| - 8.2e-13 48.4 0.0 1.1e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|518651604|ref|YP_008141124.1| - 1.8e-05 24.4 0.1 2.2e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|518651604|ref|YP_008141124.1| - 0.0056 16.4 0.1 0.011 15.4 0.1 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Fer4_7 PF12838.2 gi|518651605|ref|YP_008141125.1| - 9.6e-06 25.8 6.4 0.0022 18.3 5.8 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518651605|ref|YP_008141125.1| - 1.2e-05 25.4 6.5 3.5e-05 23.9 4.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518651605|ref|YP_008141125.1| - 1.3e-05 24.8 6.0 2e-05 24.2 4.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|518651605|ref|YP_008141125.1| - 0.0004 20.2 1.2 0.00061 19.6 0.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518651605|ref|YP_008141125.1| - 0.00063 20.0 1.4 0.98 9.8 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|518651605|ref|YP_008141125.1| - 0.0026 17.7 2.9 0.32 11.0 0.0 2.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.8 gi|518651605|ref|YP_008141125.1| - 0.0028 17.6 0.0 0.0037 17.2 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase GF_recep_IV PF14843.1 gi|518651605|ref|YP_008141125.1| - 0.01 15.4 2.6 0.013 15.0 1.8 1.1 1 0 0 1 1 1 0 Growth factor receptor domain IV A2L_zn_ribbon PF08792.5 gi|518651605|ref|YP_008141125.1| - 0.16 11.4 2.6 0.47 9.9 0.2 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Fer4_2 PF12797.2 gi|518651605|ref|YP_008141125.1| - 0.29 11.1 13.6 0.14 12.1 1.8 3.0 2 2 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|518651605|ref|YP_008141125.1| - 0.34 11.5 9.8 1 10.0 2.3 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|518651605|ref|YP_008141125.1| - 1.2 9.6 12.6 2.1 8.8 2.0 3.1 2 2 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|518651605|ref|YP_008141125.1| - 1.3 8.7 5.0 0.91 9.1 0.5 2.0 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.1 gi|518651605|ref|YP_008141125.1| - 2.7 7.9 10.2 53 3.7 7.1 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518651605|ref|YP_008141125.1| - 3.5 7.6 13.1 3.8 7.5 2.4 3.4 2 2 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.22 gi|518651605|ref|YP_008141125.1| - 6.1 6.6 17.8 3.1 7.5 0.7 3.6 3 1 0 3 3 3 0 4Fe-4S binding domain DAO PF01266.19 gi|518651606|ref|YP_008141126.1| - 1.1e-12 47.6 0.0 7.9e-07 28.2 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|518651606|ref|YP_008141126.1| - 4.9e-10 39.0 0.0 6.8e-10 38.6 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|518651606|ref|YP_008141126.1| - 4e-09 36.6 0.6 2.8e-08 33.8 0.4 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|518651606|ref|YP_008141126.1| - 3.7e-08 32.2 2.9 1.1e-07 30.7 0.5 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.19 gi|518651606|ref|YP_008141126.1| - 7.1e-08 31.6 1.2 1.2e-07 30.9 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.1 gi|518651606|ref|YP_008141126.1| - 1.8e-07 31.0 0.0 3.5e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.14 gi|518651606|ref|YP_008141126.1| - 9.2e-06 24.9 0.2 0.00034 19.7 0.2 2.6 1 1 0 1 1 1 1 FAD binding domain Thi4 PF01946.12 gi|518651606|ref|YP_008141126.1| - 1e-05 24.7 0.1 1.7e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.1 gi|518651606|ref|YP_008141126.1| - 1.7e-05 25.0 0.0 2.5e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|518651606|ref|YP_008141126.1| - 5.7e-05 22.1 1.3 0.00012 21.1 0.1 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Lycopene_cycl PF05834.7 gi|518651606|ref|YP_008141126.1| - 0.00013 21.0 0.2 0.00081 18.4 0.2 1.9 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox PF00070.22 gi|518651606|ref|YP_008141126.1| - 0.00016 21.9 0.1 0.0004 20.7 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|518651606|ref|YP_008141126.1| - 0.002 16.8 0.0 0.29 9.7 0.1 2.3 2 1 0 2 2 2 1 Tryptophan halogenase GDI PF00996.13 gi|518651606|ref|YP_008141126.1| - 0.027 12.7 0.0 0.048 11.9 0.0 1.3 1 0 0 1 1 1 0 GDP dissociation inhibitor F420_oxidored PF03807.12 gi|518651606|ref|YP_008141126.1| - 0.057 13.8 0.3 0.17 12.3 0.1 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.1 gi|518651606|ref|YP_008141126.1| - 0.14 12.1 0.2 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 NADH(P)-binding ETF PF01012.16 gi|518651607|ref|YP_008141127.1| - 1.1e-70 236.5 0.0 3.8e-34 117.7 0.0 2.2 2 0 0 2 2 2 2 Electron transfer flavoprotein domain ETF_alpha PF00766.14 gi|518651607|ref|YP_008141127.1| - 1.2e-32 111.3 1.0 2.6e-32 110.2 0.7 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain LDB19 PF13002.2 gi|518651607|ref|YP_008141127.1| - 0.14 11.6 0.2 8.6 5.8 0.1 2.5 2 0 0 2 2 2 0 Arrestin_N terminal like CBS PF00571.23 gi|518651609|ref|YP_008141129.1| - 8.9e-22 76.6 0.1 3.5e-13 49.0 0.1 2.1 2 0 0 2 2 2 2 CBS domain Vps36_ESCRT-II PF11605.3 gi|518651609|ref|YP_008141129.1| - 0.13 12.1 0.0 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Vacuolar protein sorting protein 36 Vps36 Citrate_synt PF00285.16 gi|518651610|ref|YP_008141130.1| - 1.2e-118 395.9 0.0 1.4e-118 395.7 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase DUF2802 PF10975.3 gi|518651610|ref|YP_008141130.1| - 0.12 12.1 0.0 1 9.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2802) AMP-binding PF00501.23 gi|518651611|ref|YP_008141131.1| - 4.2e-98 328.4 0.0 5.2e-98 328.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651611|ref|YP_008141131.1| - 6.9e-20 71.7 0.4 1.5e-19 70.7 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain SAICAR_synt PF01259.13 gi|518651612|ref|YP_008141132.1| - 3.2e-34 118.1 0.1 5.5e-34 117.3 0.1 1.3 1 1 0 1 1 1 1 SAICAR synthetase His_Phos_1 PF00300.17 gi|518651613|ref|YP_008141133.1| - 5.4e-24 85.0 0.0 6.3e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PALP PF00291.20 gi|518651614|ref|YP_008141134.1| - 2e-51 175.0 0.0 2.7e-51 174.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Sucrose_synth PF00862.14 gi|518651614|ref|YP_008141134.1| - 0.066 11.1 0.0 0.091 10.7 0.0 1.1 1 0 0 1 1 1 0 Sucrose synthase DUF4181 PF13789.1 gi|518651615|ref|YP_008141135.1| - 0.0049 16.7 0.6 0.0099 15.7 0.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4181) DUF1673 PF07895.6 gi|518651615|ref|YP_008141135.1| - 0.065 12.7 0.0 0.099 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Pga1 PF10333.4 gi|518651615|ref|YP_008141135.1| - 0.068 12.8 1.7 0.13 11.8 1.1 1.5 1 0 0 1 1 1 0 GPI-Mannosyltransferase II co-activator EphA2_TM PF14575.1 gi|518651615|ref|YP_008141135.1| - 2.1 8.8 4.6 7.9 6.9 0.0 2.9 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain Radical_SAM PF04055.16 gi|518651616|ref|YP_008141136.1| - 4.5e-18 65.9 0.6 1.6e-17 64.1 0.0 2.2 3 0 0 3 3 3 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|518651616|ref|YP_008141136.1| - 1.4e-06 28.2 0.2 9.8e-06 25.5 0.1 2.3 2 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|518651616|ref|YP_008141136.1| - 0.002 18.2 0.2 0.052 13.7 0.2 2.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Aldolase_II PF00596.16 gi|518651617|ref|YP_008141137.1| - 2.1e-43 148.0 0.1 2.5e-43 147.8 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Usp PF00582.21 gi|518651618|ref|YP_008141138.1| - 7.7e-17 61.7 0.0 7.2e-11 42.4 0.0 2.8 2 1 0 2 2 2 2 Universal stress protein family 5_nucleotid_C PF02872.13 gi|518651618|ref|YP_008141138.1| - 0.011 15.7 0.1 0.016 15.1 0.0 1.3 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain NAC PF01849.13 gi|518651618|ref|YP_008141138.1| - 0.098 12.1 3.0 1.1 8.8 0.1 3.0 3 0 0 3 3 3 0 NAC domain ParA PF10609.4 gi|518651619|ref|YP_008141139.1| - 0.058 13.2 0.4 0.27 11.1 0.1 2.1 2 0 0 2 2 2 0 ParA/MinD ATPase like ABC2_membrane_4 PF12730.2 gi|518651620|ref|YP_008141140.1| - 5.2e-15 55.2 50.1 7.3e-15 54.7 34.8 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|518651620|ref|YP_008141140.1| - 2.9e-11 42.7 31.5 3.7e-11 42.4 21.8 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|518651620|ref|YP_008141140.1| - 1.1e-10 41.0 46.4 1.1e-10 41.0 32.2 2.0 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|518651621|ref|YP_008141141.1| - 1.3e-22 80.6 0.0 2.1e-22 79.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651621|ref|YP_008141141.1| - 2.2e-09 37.6 5.9 5.7e-09 36.3 0.4 2.9 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|518651621|ref|YP_008141141.1| - 0.00015 22.2 1.7 0.00024 21.4 1.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|518651621|ref|YP_008141141.1| - 0.0023 17.3 0.0 0.0045 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|518651621|ref|YP_008141141.1| - 0.023 14.2 0.0 0.055 13.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.14 gi|518651621|ref|YP_008141141.1| - 0.064 12.4 0.2 1.3 8.2 0.1 2.2 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain RHH_1 PF01402.16 gi|518651623|ref|YP_008141143.1| - 0.015 15.1 6.1 0.083 12.8 0.2 2.8 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family FF PF01846.14 gi|518651623|ref|YP_008141143.1| - 0.14 12.0 0.7 0.67 9.9 0.2 2.2 1 1 1 2 2 2 0 FF domain eIF-5_eIF-2B PF01873.12 gi|518651624|ref|YP_008141144.1| - 2.8e-32 110.9 0.0 5.1e-32 110.1 0.0 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.15 gi|518651624|ref|YP_008141144.1| - 2.2e-09 36.9 0.9 2.2e-09 36.9 0.6 1.5 2 0 0 2 2 2 1 TRAM domain TF_Zn_Ribbon PF08271.7 gi|518651624|ref|YP_008141144.1| - 0.06 12.6 1.3 0.14 11.4 0.9 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|518651624|ref|YP_008141144.1| - 0.081 13.2 1.1 2.7 8.3 1.2 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar PIN PF01850.16 gi|518651625|ref|YP_008141145.1| - 1.8e-08 34.7 0.2 0.00021 21.6 0.1 2.1 1 1 1 2 2 2 2 PIN domain Fcf1 PF04900.7 gi|518651625|ref|YP_008141145.1| - 2.7e-08 33.8 0.0 4.4e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Fcf1 PIN_4 PF13638.1 gi|518651625|ref|YP_008141145.1| - 0.0032 17.5 0.0 0.007 16.4 0.0 1.6 1 1 0 1 1 1 1 PIN domain UDPGP PF01704.13 gi|518651625|ref|YP_008141145.1| - 0.021 13.3 0.0 0.022 13.2 0.0 1.1 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase UPF0278 PF08745.6 gi|518651625|ref|YP_008141145.1| - 0.066 12.4 0.0 0.15 11.2 0.0 1.6 1 1 1 2 2 2 0 UPF0278 family CTP-dep_RFKase PF01982.11 gi|518651626|ref|YP_008141146.1| - 3.8e-40 136.2 0.0 6.6e-40 135.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF120 MarR_2 PF12802.2 gi|518651626|ref|YP_008141146.1| - 0.00061 19.4 0.0 0.0012 18.4 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|518651626|ref|YP_008141146.1| - 0.00064 19.3 0.1 0.0013 18.4 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|518651626|ref|YP_008141146.1| - 0.0014 18.3 0.1 0.0029 17.3 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.7 gi|518651626|ref|YP_008141146.1| - 0.003 17.1 0.1 0.015 14.9 0.1 2.3 1 1 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.14 gi|518651626|ref|YP_008141146.1| - 0.0065 16.3 0.1 0.017 15.0 0.0 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.7 gi|518651626|ref|YP_008141146.1| - 0.012 15.1 0.2 0.061 12.8 0.0 2.3 3 0 0 3 3 3 0 DeoR-like helix-turn-helix domain HTH_24 PF13412.1 gi|518651626|ref|YP_008141146.1| - 0.019 14.3 0.1 0.056 12.8 0.1 1.9 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.1 gi|518651626|ref|YP_008141146.1| - 0.025 14.7 0.1 0.067 13.3 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.14 gi|518651626|ref|YP_008141146.1| - 0.065 12.9 0.1 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Tox-HDC PF15656.1 gi|518651626|ref|YP_008141146.1| - 0.15 12.2 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature ATP_bind_4 PF01902.12 gi|518651627|ref|YP_008141147.1| - 6.6e-41 140.0 0.0 7.8e-41 139.8 0.0 1.0 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|518651627|ref|YP_008141147.1| - 0.0037 16.5 0.1 0.0096 15.2 0.0 1.7 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|518651627|ref|YP_008141147.1| - 0.054 12.9 0.1 0.098 12.0 0.0 1.6 1 1 1 2 2 2 0 Thiamine biosynthesis protein (ThiI) PyrI PF01948.13 gi|518651628|ref|YP_008141148.1| - 1.2e-31 108.5 7.7 2.1e-31 107.8 5.3 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|518651628|ref|YP_008141148.1| - 4.3e-18 64.4 2.7 7.8e-18 63.6 1.9 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-BED PF02892.10 gi|518651628|ref|YP_008141148.1| - 0.032 14.0 0.0 0.057 13.1 0.0 1.5 1 0 0 1 1 1 0 BED zinc finger OTCace_N PF02729.16 gi|518651629|ref|YP_008141149.1| - 2.9e-46 156.6 0.0 1.5e-45 154.3 0.0 1.9 1 1 1 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|518651629|ref|YP_008141149.1| - 8.4e-37 126.4 0.0 1.3e-36 125.8 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SpoA PF01052.15 gi|518651629|ref|YP_008141149.1| - 0.041 13.4 0.0 0.098 12.2 0.0 1.6 1 0 0 1 1 1 0 Surface presentation of antigens (SPOA) SnoaL_2 PF12680.2 gi|518651630|ref|YP_008141150.1| - 4.7e-14 52.6 0.0 5.3e-14 52.4 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.7 gi|518651630|ref|YP_008141150.1| - 5e-08 32.5 0.0 8.6e-08 31.8 0.0 1.4 1 1 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_4 PF13577.1 gi|518651630|ref|YP_008141150.1| - 3.7e-06 26.8 0.0 3.8e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 SnoaL-like domain NTF2 PF02136.15 gi|518651630|ref|YP_008141150.1| - 1.3e-05 25.4 0.1 1.7e-05 25.1 0.0 1.3 1 1 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_3 PF13474.1 gi|518651630|ref|YP_008141150.1| - 0.0011 19.0 0.0 0.0012 18.8 0.0 1.3 1 1 0 1 1 1 1 SnoaL-like domain SSURE PF11966.3 gi|518651630|ref|YP_008141150.1| - 0.18 11.4 1.6 17 5.0 0.0 2.9 3 1 0 3 3 3 0 Fibronectin-binding repeat HMG-CoA_red PF00368.13 gi|518651632|ref|YP_008141152.1| - 1.6e-80 270.5 3.8 2.1e-80 270.1 2.7 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase TPR_12 PF13424.1 gi|518651633|ref|YP_008141153.1| - 3.7e-08 33.1 5.2 4.3e-06 26.5 0.1 4.0 3 1 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.1 gi|518651633|ref|YP_008141153.1| - 2.2e-07 30.3 9.6 0.0011 18.5 0.4 3.5 3 1 0 4 4 4 2 TPR repeat TPR_8 PF13181.1 gi|518651633|ref|YP_008141153.1| - 2.5e-06 26.8 14.9 0.0002 20.9 0.2 5.1 3 3 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|518651633|ref|YP_008141153.1| - 5.6e-05 22.7 8.0 0.0082 15.9 0.0 5.6 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|518651633|ref|YP_008141153.1| - 0.0086 15.6 0.1 0.0086 15.6 0.1 4.6 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|518651633|ref|YP_008141153.1| - 0.051 13.3 2.2 3.6 7.6 0.0 4.0 5 0 0 5 5 5 0 Tetratricopeptide repeat Syntaxin-6_N PF09177.6 gi|518651633|ref|YP_008141153.1| - 0.07 13.5 3.3 0.5 10.8 0.1 2.9 2 2 1 3 3 3 0 Syntaxin 6, N-terminal TPR_16 PF13432.1 gi|518651633|ref|YP_008141153.1| - 0.092 13.4 0.4 1.5 9.6 0.0 2.8 3 1 0 3 3 3 0 Tetratricopeptide repeat Abhydrolase_6 PF12697.2 gi|518651634|ref|YP_008141154.1| - 1.3e-30 106.9 0.0 2.1e-30 106.3 0.0 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|518651634|ref|YP_008141154.1| - 2.1e-16 60.0 0.0 2.6e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|518651634|ref|YP_008141154.1| - 1.2e-15 57.7 0.0 4.2e-07 29.7 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.11 gi|518651634|ref|YP_008141154.1| - 0.032 13.6 1.2 1.3 8.3 0.1 2.9 2 1 1 3 3 3 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.16 gi|518651634|ref|YP_008141154.1| - 0.042 13.0 0.1 0.17 11.1 0.0 2.0 2 1 0 2 2 2 0 Prolyl oligopeptidase family AXE1 PF05448.7 gi|518651634|ref|YP_008141154.1| - 0.11 11.0 0.0 0.19 10.2 0.0 1.5 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) V-SNARE PF05008.10 gi|518651635|ref|YP_008141155.1| - 0.6 10.2 3.0 0.32 11.1 0.2 1.9 2 0 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Enolase_C PF00113.17 gi|518651636|ref|YP_008141156.1| - 0.024 13.5 0.5 0.028 13.4 0.3 1.0 1 0 0 1 1 1 0 Enolase, C-terminal TIM barrel domain Amidohydro_1 PF01979.15 gi|518651637|ref|YP_008141157.1| - 4.9e-07 29.7 0.0 7.1e-06 25.8 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family RibD_C PF01872.12 gi|518651638|ref|YP_008141158.1| - 2.9e-28 98.8 0.0 3.7e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain DHBP_synthase PF00926.14 gi|518651639|ref|YP_008141159.1| - 3.8e-57 192.6 0.0 4.4e-57 192.4 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PIF1 PF05970.9 gi|518651639|ref|YP_008141159.1| - 0.0029 16.6 0.1 0.0042 16.0 0.1 1.2 1 0 0 1 1 1 1 PIF1-like helicase DMRL_synthase PF00885.14 gi|518651640|ref|YP_008141160.1| - 1.6e-14 53.7 0.0 2e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.14 gi|518651641|ref|YP_008141161.1| - 6.6e-37 126.3 0.0 7.2e-37 126.2 0.0 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase YibE_F PF07907.6 gi|518651642|ref|YP_008141162.1| - 0.0055 15.9 0.1 0.0068 15.6 0.1 1.0 1 0 0 1 1 1 1 YibE/F-like protein DUF1761 PF08570.5 gi|518651642|ref|YP_008141162.1| - 0.0066 16.4 0.0 0.008 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1761) DUF1469 PF07332.6 gi|518651642|ref|YP_008141162.1| - 0.04 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) BCHF PF07284.6 gi|518651642|ref|YP_008141162.1| - 0.046 13.5 0.6 0.058 13.2 0.4 1.0 1 0 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) PUCC PF03209.10 gi|518651642|ref|YP_008141162.1| - 0.054 12.2 0.0 0.054 12.1 0.0 1.0 1 0 0 1 1 1 0 PUCC protein DUF4181 PF13789.1 gi|518651642|ref|YP_008141162.1| - 0.073 12.9 0.1 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) Claudin_2 PF13903.1 gi|518651642|ref|YP_008141162.1| - 0.074 12.7 0.1 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF3796 PF12676.2 gi|518651642|ref|YP_008141162.1| - 0.096 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) Tmemb_55A PF09788.4 gi|518651642|ref|YP_008141162.1| - 0.13 11.3 0.1 0.15 11.1 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A Sulf_transp PF04143.9 gi|518651643|ref|YP_008141163.1| - 4.9e-08 32.8 21.3 6.7e-06 26.0 4.1 4.0 4 1 0 4 4 4 2 Sulphur transport HIT PF01230.18 gi|518651644|ref|YP_008141164.1| - 4.5e-24 84.8 2.1 5.4e-24 84.5 1.5 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|518651644|ref|YP_008141164.1| - 9.3e-13 48.4 4.0 1.3e-12 47.9 2.8 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|518651644|ref|YP_008141164.1| - 3e-06 26.8 2.2 4.3e-06 26.3 1.5 1.2 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Transaldolase PF00923.14 gi|518651645|ref|YP_008141165.1| - 5.2e-26 91.4 4.9 1e-25 90.4 3.4 1.4 1 1 0 1 1 1 1 Transaldolase AhpC-TSA PF00578.16 gi|518651646|ref|YP_008141166.1| - 2.5e-37 127.3 0.0 3.2e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|518651646|ref|YP_008141166.1| - 9.4e-24 83.6 0.1 1.1e-23 83.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.1 gi|518651646|ref|YP_008141166.1| - 4.2e-05 23.4 0.0 0.0041 17.0 0.0 2.2 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme FtsJ PF01728.14 gi|518651646|ref|YP_008141166.1| - 0.11 12.4 0.0 0.26 11.2 0.0 1.7 1 1 0 1 1 1 0 FtsJ-like methyltransferase Hexapep PF00132.19 gi|518651647|ref|YP_008141167.1| - 7.2e-17 60.0 13.3 2.4e-05 23.6 0.2 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|518651647|ref|YP_008141167.1| - 9.5e-06 25.0 12.2 0.039 13.5 0.3 4.3 2 1 2 4 4 4 4 Hexapeptide repeat of succinyl-transferase COXG PF06240.8 gi|518651649|ref|YP_008141169.1| - 1.2e-26 93.0 0.2 1.3e-26 92.9 0.1 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.4 gi|518651649|ref|YP_008141169.1| - 2.4e-08 34.2 0.0 2.8e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport ClpB_D2-small PF10431.4 gi|518651649|ref|YP_008141169.1| - 0.024 14.5 0.0 0.058 13.2 0.0 1.6 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein Glu_synthase PF01645.12 gi|518651649|ref|YP_008141169.1| - 0.027 13.3 0.0 0.038 12.9 0.0 1.2 1 0 0 1 1 1 0 Conserved region in glutamate synthase PDT PF00800.13 gi|518651650|ref|YP_008141170.1| - 4.9e-57 192.4 0.1 7.3e-57 191.8 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|518651650|ref|YP_008141170.1| - 6.4e-10 38.3 0.0 1.4e-09 37.2 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|518651650|ref|YP_008141170.1| - 0.0015 18.8 0.1 0.0043 17.3 0.0 1.8 2 0 0 2 2 2 1 ACT domain DUF95 PF01944.12 gi|518651651|ref|YP_008141171.1| - 1.2e-11 44.5 17.4 2.1e-11 43.7 12.1 1.3 1 0 0 1 1 1 1 Integral membrane protein DUF95 Rifin_STEVOR PF02009.11 gi|518651651|ref|YP_008141171.1| - 0.039 13.6 0.2 0.054 13.1 0.2 1.2 1 0 0 1 1 1 0 Rifin/stevor family Abhydrolase_2 PF02230.11 gi|518651651|ref|YP_008141171.1| - 0.12 11.7 0.3 0.18 11.2 0.2 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase SVM_signal PF12113.3 gi|518651651|ref|YP_008141171.1| - 0.24 11.2 0.1 0.24 11.2 0.1 2.8 3 0 0 3 3 3 0 SVM protein signal sequence DUF2678 PF10856.3 gi|518651651|ref|YP_008141171.1| - 0.27 10.9 6.0 0.28 10.9 2.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2678) Voltage_CLC PF00654.15 gi|518651652|ref|YP_008141172.1| - 6.9e-86 288.4 33.3 6.9e-86 288.4 23.1 2.1 2 0 0 2 2 2 1 Voltage gated chloride channel CBS PF00571.23 gi|518651652|ref|YP_008141172.1| - 1.8e-10 40.4 0.0 9.7e-05 22.0 0.0 2.7 2 0 0 2 2 2 2 CBS domain SIS_2 PF13580.1 gi|518651654|ref|YP_008141174.1| - 1.2e-27 96.3 0.7 1.5e-27 96.0 0.5 1.1 1 0 0 1 1 1 1 SIS domain SIS PF01380.17 gi|518651654|ref|YP_008141174.1| - 1.5e-07 31.0 0.1 6.1e-07 29.1 0.1 2.0 1 1 0 1 1 1 1 SIS domain GHMP_kinases_C PF08544.8 gi|518651655|ref|YP_008141175.1| - 5.3e-11 42.5 0.0 1.7e-10 40.9 0.0 1.8 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.21 gi|518651655|ref|YP_008141175.1| - 5.5e-11 42.3 0.0 1e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain FYRN PF05964.9 gi|518651655|ref|YP_008141175.1| - 0.074 12.5 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 F/Y-rich N-terminus DUF4209 PF13910.1 gi|518651656|ref|YP_008141176.1| - 0.082 12.9 0.5 1.8 8.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4209) DUF1125 PF06563.6 gi|518651657|ref|YP_008141177.1| - 0.15 11.8 3.6 1.2 8.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1125) THF_DHG_CYH_C PF02882.14 gi|518651658|ref|YP_008141178.1| - 2.6e-50 169.6 0.2 4.2e-50 168.9 0.2 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 gi|518651658|ref|YP_008141178.1| - 5.3e-31 107.0 0.6 2.7e-30 104.8 0.2 1.9 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ADH_N PF08240.7 gi|518651659|ref|YP_008141179.1| - 2.8e-14 52.7 0.1 4.1e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|518651659|ref|YP_008141179.1| - 0.016 14.7 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase CMD PF02627.15 gi|518651660|ref|YP_008141180.1| - 3.8e-17 61.9 0.2 5.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Methyltransf_15 PF09445.5 gi|518651661|ref|YP_008141181.1| - 0.00064 19.3 0.0 0.0012 18.3 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.1 gi|518651661|ref|YP_008141181.1| - 0.0033 17.0 0.0 0.0063 16.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518651661|ref|YP_008141181.1| - 0.061 13.9 0.0 0.1 13.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain GTP_cyclohydro2 PF00925.15 gi|518651662|ref|YP_008141182.1| - 2.1e-64 215.8 0.0 2.4e-64 215.6 0.0 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase II UL11 PF11094.3 gi|518651663|ref|YP_008141183.1| - 0.074 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein RasGAP_C PF03836.10 gi|518651663|ref|YP_008141183.1| - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 RasGAP C-terminus UbiA PF01040.13 gi|518651664|ref|YP_008141184.1| - 2.4e-33 115.4 17.2 3.1e-33 115.0 11.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family PGG PF13962.1 gi|518651664|ref|YP_008141184.1| - 0.0007 19.1 3.2 0.0007 19.1 2.2 2.1 2 1 0 2 2 2 1 Domain of unknown function Vma12 PF11712.3 gi|518651664|ref|YP_008141184.1| - 1.3 8.7 8.6 0.83 9.3 1.7 2.6 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Esterase PF00756.15 gi|518651666|ref|YP_008141186.1| - 1.7e-10 40.7 0.0 3.7e-10 39.6 0.0 1.5 1 1 0 1 1 1 1 Putative esterase Abhydrolase_6 PF12697.2 gi|518651666|ref|YP_008141186.1| - 0.0001 22.2 0.0 0.00014 21.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|518651666|ref|YP_008141186.1| - 0.0016 18.2 0.0 0.0023 17.6 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|518651666|ref|YP_008141186.1| - 0.052 12.7 0.0 0.11 11.6 0.0 1.5 1 0 0 1 1 1 0 Prolyl oligopeptidase family Pyr_redox_2 PF07992.9 gi|518651667|ref|YP_008141187.1| - 7.5e-36 123.9 0.2 1e-35 123.4 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|518651667|ref|YP_008141187.1| - 8.6e-17 61.1 0.0 2.1e-16 59.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|518651667|ref|YP_008141187.1| - 4.1e-13 49.5 1.5 1e-06 29.0 0.0 3.7 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518651667|ref|YP_008141187.1| - 3.2e-12 46.9 0.0 0.0088 16.1 0.0 3.2 1 1 2 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|518651667|ref|YP_008141187.1| - 9.7e-07 28.0 2.3 0.0074 15.2 0.5 3.6 2 2 2 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|518651667|ref|YP_008141187.1| - 2.4e-06 27.4 0.2 0.001 19.0 0.1 2.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|518651667|ref|YP_008141187.1| - 2.5e-06 26.2 0.1 0.00066 18.2 0.5 2.9 3 0 0 3 3 3 1 HI0933-like protein K_oxygenase PF13434.1 gi|518651667|ref|YP_008141187.1| - 3.9e-06 26.0 0.1 4.9e-05 22.4 0.0 2.2 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.19 gi|518651667|ref|YP_008141187.1| - 3.1e-05 22.9 0.2 8.4e-05 21.5 0.1 1.7 2 0 0 2 2 2 1 FAD binding domain TrkA_N PF02254.13 gi|518651667|ref|YP_008141187.1| - 0.0013 18.7 0.2 1.5 8.8 0.0 2.6 3 0 0 3 3 2 2 TrkA-N domain FAD_oxidored PF12831.2 gi|518651667|ref|YP_008141187.1| - 0.0014 17.7 0.7 0.0021 17.1 0.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.1 gi|518651667|ref|YP_008141187.1| - 0.0034 17.5 0.0 0.83 9.9 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding Trp_halogenase PF04820.9 gi|518651667|ref|YP_008141187.1| - 0.0043 15.7 0.2 0.0081 14.8 0.2 1.4 1 0 0 1 1 1 1 Tryptophan halogenase NAD_binding_9 PF13454.1 gi|518651667|ref|YP_008141187.1| - 0.0047 16.7 0.4 1.4 8.6 0.0 3.9 3 2 2 5 5 5 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.7 gi|518651667|ref|YP_008141187.1| - 0.0054 15.6 0.0 0.014 14.3 0.0 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein GIDA PF01134.17 gi|518651667|ref|YP_008141187.1| - 0.01 14.6 0.7 0.01 14.6 0.5 3.1 3 1 1 4 4 4 0 Glucose inhibited division protein A AlaDh_PNT_C PF01262.16 gi|518651667|ref|YP_008141187.1| - 0.075 12.5 0.7 0.79 9.2 0.2 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Semialdhyde_dh PF01118.19 gi|518651667|ref|YP_008141187.1| - 0.09 13.0 0.1 0.73 10.1 0.1 2.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|518651667|ref|YP_008141187.1| - 0.13 12.0 0.4 5.9 6.6 0.0 2.5 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 gi|518651667|ref|YP_008141187.1| - 0.14 11.7 0.3 0.65 9.6 0.0 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|518651667|ref|YP_008141187.1| - 0.16 10.9 0.2 8.8 5.2 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain Glycos_transf_2 PF00535.21 gi|518651668|ref|YP_008141188.1| - 1.9e-26 92.7 0.4 1.9e-26 92.7 0.3 1.4 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518651668|ref|YP_008141188.1| - 6e-06 26.2 0.0 9.2e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|518651668|ref|YP_008141188.1| - 0.0016 18.7 0.1 0.005 17.1 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Regulator_TrmB PF11495.3 gi|518651669|ref|YP_008141189.1| - 3.7e-55 186.4 1.4 4.6e-55 186.1 1.0 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.14 gi|518651669|ref|YP_008141189.1| - 5.7e-22 77.2 0.0 1.4e-21 75.9 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Chlorovi_GP_rpt PF06598.6 gi|518651669|ref|YP_008141189.1| - 0.0069 16.2 0.3 0.016 15.0 0.2 1.6 1 0 0 1 1 1 1 Chlorovirus glycoprotein repeat HTH_5 PF01022.15 gi|518651669|ref|YP_008141189.1| - 0.11 12.1 0.0 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family AhpC-TSA PF00578.16 gi|518651670|ref|YP_008141190.1| - 2.2e-34 117.8 0.1 3.9e-34 117.0 0.0 1.4 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.5 gi|518651670|ref|YP_008141190.1| - 2e-13 50.0 0.0 2.5e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin M60-like PF13402.1 gi|518651670|ref|YP_008141190.1| - 0.018 13.9 0.0 0.019 13.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase M60-like family 1-cysPrx_C PF10417.4 gi|518651670|ref|YP_008141190.1| - 0.032 13.8 0.1 0.078 12.6 0.1 1.7 1 0 0 1 1 1 0 C-terminal domain of 1-Cys peroxiredoxin Fe_dep_repr_C PF02742.10 gi|518651671|ref|YP_008141191.1| - 6.4e-17 61.0 0.0 1.1e-16 60.2 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|518651671|ref|YP_008141191.1| - 6.5e-10 38.8 0.0 1.8e-09 37.4 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|518651671|ref|YP_008141191.1| - 0.00021 20.9 0.1 0.0005 19.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|518651671|ref|YP_008141191.1| - 0.00033 20.3 0.1 0.00084 19.1 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.1 gi|518651671|ref|YP_008141191.1| - 0.00062 19.5 0.0 0.0014 18.4 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_5 PF01022.15 gi|518651671|ref|YP_008141191.1| - 0.0024 17.5 0.3 0.0046 16.6 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|518651671|ref|YP_008141191.1| - 0.0056 16.3 0.1 0.012 15.3 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.1 gi|518651671|ref|YP_008141191.1| - 0.012 14.9 0.2 0.027 13.8 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_10 PF04967.7 gi|518651671|ref|YP_008141191.1| - 0.039 13.5 0.0 0.078 12.5 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain GntR PF00392.16 gi|518651671|ref|YP_008141191.1| - 0.041 13.3 0.0 0.074 12.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_1 PF00126.22 gi|518651671|ref|YP_008141191.1| - 0.057 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HemN_C PF06969.11 gi|518651671|ref|YP_008141191.1| - 0.14 12.2 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 HemN C-terminal domain Phage_CI_repr PF07022.8 gi|518651671|ref|YP_008141191.1| - 0.14 12.2 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain IncA PF04156.9 gi|518651672|ref|YP_008141192.1| - 4.7e-07 29.6 50.4 0.014 15.0 16.9 3.7 1 1 2 3 3 3 3 IncA protein Myosin_tail_1 PF01576.14 gi|518651672|ref|YP_008141192.1| - 1.8e-05 22.7 42.0 2.5e-05 22.2 29.1 1.2 1 0 0 1 1 1 1 Myosin tail Filament PF00038.16 gi|518651672|ref|YP_008141192.1| - 4e-05 23.2 38.8 0.025 14.0 7.2 3.2 1 1 1 3 3 3 3 Intermediate filament protein AAA_13 PF13166.1 gi|518651672|ref|YP_008141192.1| - 5e-05 21.9 37.9 6.8e-05 21.5 26.2 1.2 1 0 0 1 1 1 1 AAA domain Fib_alpha PF08702.5 gi|518651672|ref|YP_008141192.1| - 0.00033 20.7 32.2 0.031 14.3 8.9 2.6 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family COG2 PF06148.6 gi|518651672|ref|YP_008141192.1| - 0.00039 20.3 2.9 0.00039 20.3 2.0 3.8 1 1 2 3 3 3 1 COG (conserved oligomeric Golgi) complex component, COG2 Med9 PF07544.8 gi|518651672|ref|YP_008141192.1| - 0.00054 19.6 29.6 0.00096 18.8 5.3 4.1 1 1 2 3 3 3 1 RNA polymerase II transcription mediator complex subunit 9 Reo_sigmaC PF04582.7 gi|518651672|ref|YP_008141192.1| - 0.001 18.3 18.2 0.011 14.9 5.8 2.5 1 1 2 3 3 3 3 Reovirus sigma C capsid protein CENP-F_leu_zip PF10473.4 gi|518651672|ref|YP_008141192.1| - 0.001 18.9 49.5 0.27 11.0 8.9 3.4 1 1 2 3 3 3 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.1 gi|518651672|ref|YP_008141192.1| - 0.0012 18.0 50.2 0.018 14.2 17.1 3.1 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding ATG16 PF08614.6 gi|518651672|ref|YP_008141192.1| - 0.0013 18.5 49.7 0.064 13.0 12.8 2.3 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) HOOK PF05622.7 gi|518651672|ref|YP_008141192.1| - 0.0041 15.0 43.2 0.011 13.5 30.0 1.9 1 1 0 1 1 1 1 HOOK protein DUF3450 PF11932.3 gi|518651672|ref|YP_008141192.1| - 0.0048 16.1 33.8 0.11 11.7 8.9 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF3450) CCDC155 PF14662.1 gi|518651672|ref|YP_008141192.1| - 0.0065 16.0 43.1 0.48 9.9 16.2 2.4 1 1 1 2 2 2 2 Coiled-coil region of CCDC155 HrpB7 PF09486.5 gi|518651672|ref|YP_008141192.1| - 0.0083 16.0 11.7 0.12 12.2 2.4 2.4 1 1 1 2 2 2 2 Bacterial type III secretion protein (HrpB7) Atg14 PF10186.4 gi|518651672|ref|YP_008141192.1| - 0.0094 14.9 37.9 0.051 12.5 9.2 2.8 1 1 1 2 2 2 1 UV radiation resistance protein and autophagy-related subunit 14 Laminin_I PF06008.9 gi|518651672|ref|YP_008141192.1| - 0.01 15.1 43.8 0.0099 15.2 17.8 2.1 1 1 1 2 2 2 0 Laminin Domain I SlyX PF04102.7 gi|518651672|ref|YP_008141192.1| - 0.014 15.7 1.9 0.014 15.7 1.3 4.9 1 1 4 5 5 4 0 SlyX Spc7 PF08317.6 gi|518651672|ref|YP_008141192.1| - 0.016 13.8 45.3 0.32 9.6 4.1 2.9 1 1 1 2 2 2 0 Spc7 kinetochore protein TMF_DNA_bd PF12329.3 gi|518651672|ref|YP_008141192.1| - 0.017 14.9 55.9 0.64 9.8 9.6 4.9 2 2 3 5 5 5 0 TATA element modulatory factor 1 DNA binding DUF745 PF05335.8 gi|518651672|ref|YP_008141192.1| - 0.024 14.1 27.4 0.032 13.7 11.0 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF745) DUF2570 PF10828.3 gi|518651672|ref|YP_008141192.1| - 0.025 14.1 2.1 0.025 14.1 1.4 4.1 1 1 3 4 4 4 0 Protein of unknown function (DUF2570) MCPsignal PF00015.16 gi|518651672|ref|YP_008141192.1| - 0.033 13.7 20.5 0.02 14.4 9.9 2.7 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain HALZ PF02183.13 gi|518651672|ref|YP_008141192.1| - 0.044 13.4 1.2 0.044 13.4 0.8 6.2 5 2 1 7 7 5 0 Homeobox associated leucine zipper DUF3584 PF12128.3 gi|518651672|ref|YP_008141192.1| - 0.048 10.9 40.7 0.076 10.3 28.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Mnd1 PF03962.10 gi|518651672|ref|YP_008141192.1| - 0.05 13.2 38.8 0.31 10.6 9.6 3.0 1 1 2 3 3 3 0 Mnd1 family Bacillus_HBL PF05791.6 gi|518651672|ref|YP_008141192.1| - 0.07 12.4 33.6 0.96 8.7 9.6 2.9 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) LXG PF04740.7 gi|518651672|ref|YP_008141192.1| - 0.076 12.7 38.2 0.26 11.0 12.3 2.7 1 1 1 2 2 2 0 LXG domain of WXG superfamily Laminin_II PF06009.7 gi|518651672|ref|YP_008141192.1| - 0.083 12.6 34.9 0.41 10.4 3.4 3.7 1 1 3 4 4 4 0 Laminin Domain II Baculo_PEP_C PF04513.7 gi|518651672|ref|YP_008141192.1| - 0.11 12.3 26.3 0.03 14.1 6.1 3.0 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Strep_SA_rep PF06696.6 gi|518651672|ref|YP_008141192.1| - 0.14 11.9 0.4 0.14 11.9 0.3 2.8 2 0 0 2 2 1 0 Streptococcal surface antigen repeat DivIVA PF05103.8 gi|518651672|ref|YP_008141192.1| - 0.15 12.0 40.3 1.8 8.6 5.4 4.5 1 1 2 3 3 3 0 DivIVA protein DUF1664 PF07889.7 gi|518651672|ref|YP_008141192.1| - 0.16 11.7 28.4 3.6 7.4 1.8 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) ADIP PF11559.3 gi|518651672|ref|YP_008141192.1| - 0.2 11.5 47.7 1.3 8.8 10.8 3.9 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding Lipoprotein_6 PF01441.14 gi|518651672|ref|YP_008141192.1| - 0.21 11.4 27.6 0.15 11.9 9.8 2.4 1 1 1 2 2 2 0 Lipoprotein GOLGA2L5 PF15070.1 gi|518651672|ref|YP_008141192.1| - 0.21 10.0 30.9 0.51 8.7 6.6 2.3 1 1 1 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 ALIX_LYPXL_bnd PF13949.1 gi|518651672|ref|YP_008141192.1| - 0.26 10.1 38.6 2 7.2 21.0 2.5 1 1 1 2 2 2 0 ALIX V-shaped domain binding to HIV TBPIP PF07106.8 gi|518651672|ref|YP_008141192.1| - 0.3 10.6 45.5 0.19 11.2 10.1 3.2 1 1 2 3 3 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF869 PF05911.6 gi|518651672|ref|YP_008141192.1| - 0.3 9.2 39.2 1.6 6.8 15.8 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF869) MscS_porin PF12795.2 gi|518651672|ref|YP_008141192.1| - 0.31 10.3 41.1 0.98 8.6 14.3 2.5 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain APG6 PF04111.7 gi|518651672|ref|YP_008141192.1| - 0.42 9.6 46.9 1.9 7.4 15.2 2.2 1 1 1 2 2 2 0 Autophagy protein Apg6 BLOC1_2 PF10046.4 gi|518651672|ref|YP_008141192.1| - 0.44 10.7 42.0 0.097 12.8 6.9 4.5 1 1 3 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4200 PF13863.1 gi|518651672|ref|YP_008141192.1| - 0.46 10.4 51.3 1.7 8.5 13.2 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) TPR_MLP1_2 PF07926.7 gi|518651672|ref|YP_008141192.1| - 0.51 10.0 51.0 0.28 10.9 7.6 3.7 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein EzrA PF06160.7 gi|518651672|ref|YP_008141192.1| - 0.56 8.3 40.1 1.5 6.8 27.3 1.9 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA DivIC PF04977.10 gi|518651672|ref|YP_008141192.1| - 0.71 9.4 46.2 0.067 12.6 2.6 5.8 1 1 5 6 6 6 0 Septum formation initiator Seryl_tRNA_N PF02403.17 gi|518651672|ref|YP_008141192.1| - 0.8 9.7 42.4 3.1 7.8 8.3 3.6 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Tropomyosin PF00261.15 gi|518651672|ref|YP_008141192.1| - 1 8.3 43.3 14 4.7 29.7 2.6 1 1 0 1 1 1 0 Tropomyosin NPV_P10 PF05531.7 gi|518651672|ref|YP_008141192.1| - 1.2 9.4 24.6 0.78 10.0 2.5 4.3 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF812 PF05667.6 gi|518651672|ref|YP_008141192.1| - 1.2 7.5 40.1 1.9 6.8 11.0 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF812) DUF4618 PF15397.1 gi|518651672|ref|YP_008141192.1| - 1.3 8.3 42.3 0.17 11.2 15.1 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) TMPIT PF07851.8 gi|518651672|ref|YP_008141192.1| - 1.4 7.9 32.2 0.53 9.2 9.8 2.4 1 1 1 2 2 2 0 TMPIT-like protein CENP-Q PF13094.1 gi|518651672|ref|YP_008141192.1| - 1.5 8.8 48.9 1 9.3 11.3 3.1 1 1 2 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit V_ATPase_I PF01496.14 gi|518651672|ref|YP_008141192.1| - 1.7 6.4 35.3 3.4 5.4 15.0 2.4 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF1515 PF07439.6 gi|518651672|ref|YP_008141192.1| - 1.9 8.3 11.1 2.5 7.9 1.3 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1515) Phage_GP20 PF06810.6 gi|518651672|ref|YP_008141192.1| - 2 7.8 50.1 13 5.2 8.0 4.2 1 1 3 4 4 4 0 Phage minor structural protein GP20 IFT57 PF10498.4 gi|518651672|ref|YP_008141192.1| - 2.5 6.7 42.2 2 7.0 17.8 2.3 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF2461 PF09365.5 gi|518651672|ref|YP_008141192.1| - 2.6 7.3 13.3 0.57 9.5 1.8 2.3 1 1 0 2 2 2 0 Conserved hypothetical protein (DUF2461) Syntaxin-6_N PF09177.6 gi|518651672|ref|YP_008141192.1| - 2.7 8.4 30.5 3.3 8.1 0.4 3.9 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF948 PF06103.6 gi|518651672|ref|YP_008141192.1| - 2.8 7.8 25.9 3.6 7.5 1.6 4.4 1 1 4 5 5 5 0 Bacterial protein of unknown function (DUF948) Nup54 PF13874.1 gi|518651672|ref|YP_008141192.1| - 3 7.4 30.4 2.7 7.6 8.2 2.7 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF4201 PF13870.1 gi|518651672|ref|YP_008141192.1| - 3.3 7.1 47.7 6 6.2 20.0 3.4 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) HCR PF07111.7 gi|518651672|ref|YP_008141192.1| - 3.6 5.4 30.9 0.2 9.6 12.9 2.0 1 1 1 2 2 2 0 Alpha helical coiled-coil rod protein (HCR) WXG100 PF06013.7 gi|518651672|ref|YP_008141192.1| - 3.6 7.6 20.5 9.6 6.2 2.2 4.9 3 2 0 4 4 3 0 Proteins of 100 residues with WXG M_domain PF12938.2 gi|518651672|ref|YP_008141192.1| - 3.6 7.3 11.8 4 7.1 1.7 2.4 2 0 0 2 2 2 0 M domain of GW182 DUF2400 PF09674.5 gi|518651672|ref|YP_008141192.1| - 3.6 7.2 18.6 3.1 7.4 5.6 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF2400) FliJ PF02050.11 gi|518651672|ref|YP_008141192.1| - 3.7 7.6 35.7 2.5 8.1 7.8 3.0 1 1 2 3 3 3 0 Flagellar FliJ protein DUF972 PF06156.8 gi|518651672|ref|YP_008141192.1| - 3.7 7.9 41.9 2.6 8.4 5.4 3.9 1 1 3 4 4 4 0 Protein of unknown function (DUF972) Spectrin PF00435.16 gi|518651672|ref|YP_008141192.1| - 4.1 7.7 37.3 7.8 6.8 8.5 3.3 1 1 2 3 3 3 0 Spectrin repeat DUF2205 PF10224.4 gi|518651672|ref|YP_008141192.1| - 4.1 7.0 31.6 1.1 8.8 5.5 4.9 1 1 4 5 5 5 0 Predicted coiled-coil protein (DUF2205) Rootletin PF15035.1 gi|518651672|ref|YP_008141192.1| - 4.3 7.2 41.3 1.1 9.2 20.3 3.1 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DREPP PF05558.7 gi|518651672|ref|YP_008141192.1| - 4.7 7.0 17.2 0.76 9.5 7.8 2.5 1 1 0 2 2 1 0 DREPP plasma membrane polypeptide Syntaxin PF00804.20 gi|518651672|ref|YP_008141192.1| - 4.7 7.4 40.4 4.1 7.6 7.3 3.4 1 1 2 3 3 3 0 Syntaxin DUF4404 PF14357.1 gi|518651672|ref|YP_008141192.1| - 4.7 7.6 39.5 0.044 14.2 5.5 4.1 1 1 4 5 5 3 0 Domain of unknown function (DUF4404) FlxA PF14282.1 gi|518651672|ref|YP_008141192.1| - 5 7.1 46.4 0.89 9.5 10.5 3.8 1 1 2 3 3 3 0 FlxA-like protein DUF2968 PF11180.3 gi|518651672|ref|YP_008141192.1| - 5.1 6.4 27.6 0.42 9.9 6.4 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF2968) RmuC PF02646.11 gi|518651672|ref|YP_008141192.1| - 5.4 5.7 31.4 1.5 7.5 5.0 3.8 1 1 3 4 4 4 0 RmuC family TMP_2 PF06791.8 gi|518651672|ref|YP_008141192.1| - 6.6 6.2 10.8 5.8 6.4 2.8 2.5 1 1 1 2 2 2 0 Prophage tail length tape measure protein A1_Propeptide PF07966.7 gi|518651672|ref|YP_008141192.1| - 7.5 6.4 6.9 11 5.9 0.1 3.7 4 0 0 4 4 2 0 A1 Propeptide Fmp27_WPPW PF10359.4 gi|518651672|ref|YP_008141192.1| - 10 4.4 39.3 0.083 11.2 8.6 3.4 1 1 2 3 3 3 0 RNA pol II promoter Fmp27 protein domain Trp_halogenase PF04820.9 gi|518651673|ref|YP_008141193.1| - 0.16 10.6 0.0 0.93 8.0 0.0 2.0 1 1 0 1 1 1 0 Tryptophan halogenase Abhydrolase_6 PF12697.2 gi|518651674|ref|YP_008141194.1| - 7.4e-23 81.6 0.0 1.9e-18 67.1 0.0 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|518651674|ref|YP_008141194.1| - 2.4e-19 69.5 0.0 3e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|518651674|ref|YP_008141194.1| - 5e-12 45.8 0.0 3.7e-10 39.7 0.1 2.3 1 1 1 2 2 2 1 alpha/beta hydrolase fold Ndr PF03096.9 gi|518651674|ref|YP_008141194.1| - 0.00011 20.7 0.0 0.00015 20.3 0.0 1.1 1 0 0 1 1 1 1 Ndr family Thioredoxin_7 PF13899.1 gi|518651674|ref|YP_008141194.1| - 0.0042 17.0 0.0 0.7 9.9 0.0 2.7 2 1 1 3 3 3 1 Thioredoxin-like Hydrolase_4 PF12146.3 gi|518651674|ref|YP_008141194.1| - 0.016 15.0 0.0 0.035 13.9 0.0 1.6 1 0 0 1 1 1 0 Putative lysophospholipase BAAT_C PF08840.6 gi|518651674|ref|YP_008141194.1| - 0.03 14.0 0.0 0.041 13.5 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase PF00756.15 gi|518651674|ref|YP_008141194.1| - 0.037 13.4 0.0 0.078 12.3 0.0 1.8 1 1 0 1 1 1 0 Putative esterase Peptidase_S9 PF00326.16 gi|518651674|ref|YP_008141194.1| - 0.1 11.8 0.1 0.46 9.6 0.1 1.8 1 1 1 2 2 2 0 Prolyl oligopeptidase family PPDK_N PF01326.14 gi|518651675|ref|YP_008141195.1| - 1.6e-96 323.2 0.0 3.1e-96 322.2 0.0 1.4 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|518651675|ref|YP_008141195.1| - 1e-67 228.1 0.0 1.5e-67 227.5 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|518651675|ref|YP_008141195.1| - 3.8e-26 90.4 0.3 9.9e-26 89.1 0.2 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Acetyltransf_9 PF13527.1 gi|518651676|ref|YP_008141196.1| - 8.4e-05 22.4 0.0 0.00016 21.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain TSP_C PF05735.7 gi|518651676|ref|YP_008141196.1| - 0.03 13.9 0.2 0.057 12.9 0.2 1.4 1 0 0 1 1 1 0 Thrombospondin C-terminal region Epimerase PF01370.16 gi|518651677|ref|YP_008141197.1| - 1.7e-41 142.2 0.4 2e-41 141.9 0.3 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518651677|ref|YP_008141197.1| - 3.2e-07 29.5 0.0 4.5e-07 29.0 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|518651677|ref|YP_008141197.1| - 1.9e-06 26.8 2.0 1.2e-05 24.1 1.3 2.0 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|518651677|ref|YP_008141197.1| - 1.6e-05 23.9 0.2 0.002 17.0 0.1 2.5 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NmrA PF05368.8 gi|518651677|ref|YP_008141197.1| - 1.7e-05 24.2 0.2 0.017 14.4 0.1 2.2 2 0 0 2 2 2 2 NmrA-like family NAD_binding_4 PF07993.7 gi|518651677|ref|YP_008141197.1| - 8.7e-05 21.5 0.1 0.29 10.0 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein eRF1_2 PF03464.10 gi|518651677|ref|YP_008141197.1| - 0.0069 16.7 1.1 0.036 14.4 0.0 2.5 3 0 0 3 3 3 1 eRF1 domain 2 NAD_binding_10 PF13460.1 gi|518651677|ref|YP_008141197.1| - 0.022 14.7 0.0 0.16 11.9 0.0 2.1 1 1 0 1 1 1 0 NADH(P)-binding FAD_binding_4 PF01565.18 gi|518651677|ref|YP_008141197.1| - 0.063 12.7 0.0 21 4.5 0.0 3.0 3 0 0 3 3 3 0 FAD binding domain Destabilase PF05497.7 gi|518651678|ref|YP_008141198.1| - 0.1 12.7 0.5 4.8 7.2 0.1 2.1 1 1 1 2 2 2 0 Destabilase UDG PF03167.14 gi|518651679|ref|YP_008141199.1| - 1e-26 93.2 0.0 1.3e-26 92.9 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily adh_short_C2 PF13561.1 gi|518651680|ref|YP_008141200.1| - 4.7e-12 46.1 0.3 6.4e-12 45.7 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|518651680|ref|YP_008141200.1| - 1.2e-09 38.3 0.0 1.5e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_7 PF13241.1 gi|518651680|ref|YP_008141200.1| - 0.00016 21.9 0.0 0.06 13.6 0.0 2.3 2 0 0 2 2 2 2 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|518651680|ref|YP_008141200.1| - 0.0002 21.6 0.1 0.00057 20.2 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|518651680|ref|YP_008141200.1| - 0.00025 21.1 0.1 0.00049 20.2 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.11 gi|518651680|ref|YP_008141200.1| - 0.016 14.6 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.1 gi|518651680|ref|YP_008141200.1| - 0.02 14.9 0.0 0.052 13.5 0.0 1.7 1 1 0 1 1 1 0 NADH(P)-binding NmrA PF05368.8 gi|518651680|ref|YP_008141200.1| - 0.039 13.2 0.0 0.078 12.2 0.0 1.5 1 1 1 2 2 2 0 NmrA-like family AdoHcyase_NAD PF00670.16 gi|518651680|ref|YP_008141200.1| - 0.043 13.6 0.1 0.083 12.7 0.0 1.7 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.10 gi|518651680|ref|YP_008141200.1| - 0.083 12.7 0.1 0.44 10.3 0.0 2.3 2 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.13 gi|518651680|ref|YP_008141200.1| - 0.094 12.7 0.1 0.22 11.5 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain KR PF08659.5 gi|518651680|ref|YP_008141200.1| - 0.14 11.7 0.0 0.33 10.6 0.0 1.6 1 1 1 2 2 2 0 KR domain NfeD PF01957.13 gi|518651681|ref|YP_008141201.1| - 3.2e-09 37.0 0.0 3.6e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding Kei1 PF08552.6 gi|518651681|ref|YP_008141201.1| - 0.04 13.5 0.0 0.04 13.5 0.0 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Lysine_decarbox PF03641.9 gi|518651682|ref|YP_008141202.1| - 4.4e-05 23.2 0.2 6.8e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 Possible lysine decarboxylase DNA_processg_A PF02481.10 gi|518651682|ref|YP_008141202.1| - 6.6e-05 21.9 0.0 0.063 12.1 0.0 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Nuc_deoxyrib_tr PF05014.10 gi|518651682|ref|YP_008141202.1| - 0.059 13.2 0.0 0.088 12.6 0.0 1.5 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase DUF2112 PF09885.4 gi|518651682|ref|YP_008141202.1| - 0.067 12.8 0.0 0.079 12.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2112) DUF2407_C PF13373.1 gi|518651683|ref|YP_008141203.1| - 0.22 11.4 1.1 6.4 6.6 0.4 2.6 2 1 1 3 3 3 0 DUF2407 C-terminal domain UPF0233 PF06781.7 gi|518651683|ref|YP_008141203.1| - 0.44 10.1 0.0 0.44 10.1 0.0 2.4 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0233) DUF1673 PF07895.6 gi|518651683|ref|YP_008141203.1| - 0.75 9.2 12.4 2.8 7.4 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) Adeno_E3_14_5 PF04834.7 gi|518651683|ref|YP_008141203.1| - 2.4 8.6 5.7 0.19 12.1 0.3 2.0 2 1 1 3 3 3 0 Early E3 14.5 kDa protein Synaptobrevin PF00957.16 gi|518651683|ref|YP_008141203.1| - 3.6 7.2 11.7 0.22 11.1 0.2 3.0 3 0 0 3 3 3 0 Synaptobrevin DctQ PF04290.7 gi|518651683|ref|YP_008141203.1| - 6.1 6.6 8.7 6 6.6 0.1 2.7 1 1 2 3 3 3 0 Tripartite ATP-independent periplasmic transporters, DctQ component Thiolase_N PF00108.18 gi|518651684|ref|YP_008141204.1| - 1.5e-80 269.9 1.1 1.9e-80 269.6 0.8 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|518651684|ref|YP_008141204.1| - 3e-37 126.7 0.0 7.8e-37 125.4 0.0 1.8 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|518651684|ref|YP_008141204.1| - 0.005 16.3 0.1 0.014 14.9 0.0 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain DUF86 PF01934.12 gi|518651685|ref|YP_008141205.1| - 2.1e-20 72.5 2.1 2.6e-20 72.2 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF4145 PF13643.1 gi|518651685|ref|YP_008141205.1| - 0.0009 19.0 0.7 0.0025 17.6 0.1 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4145) NTP_transf_2 PF01909.18 gi|518651686|ref|YP_008141206.1| - 6.6e-09 35.9 0.1 8.1e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Thiolase_N PF00108.18 gi|518651687|ref|YP_008141207.1| - 1.8e-63 213.9 0.0 3.7e-63 212.9 0.0 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|518651687|ref|YP_008141207.1| - 5.8e-47 158.1 0.1 2.2e-46 156.2 0.1 1.9 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|518651687|ref|YP_008141207.1| - 4.1e-07 29.7 0.2 4.1e-07 29.7 0.2 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.6 gi|518651687|ref|YP_008141207.1| - 0.025 13.0 0.1 0.066 11.6 0.1 1.6 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) Peptidase_S24 PF00717.18 gi|518651689|ref|YP_008141209.1| - 7.1e-06 25.5 0.6 1.4e-05 24.6 0.4 1.5 1 0 0 1 1 1 1 Peptidase S24-like DUF95 PF01944.12 gi|518651689|ref|YP_008141209.1| - 2.5e-05 23.9 26.1 2.5e-05 23.9 18.1 3.8 3 1 2 5 5 5 1 Integral membrane protein DUF95 DLIC PF05783.6 gi|518651690|ref|YP_008141210.1| - 0.019 13.6 1.1 0.021 13.5 0.8 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF1539 PF07560.6 gi|518651690|ref|YP_008141210.1| - 0.03 14.1 0.5 0.034 14.0 0.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1539) DUF4238 PF14022.1 gi|518651690|ref|YP_008141210.1| - 0.069 12.4 2.2 0.085 12.1 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) DUF4358 PF14270.1 gi|518651690|ref|YP_008141210.1| - 0.083 12.7 1.8 0.11 12.3 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) DUF1870 PF08965.5 gi|518651690|ref|YP_008141210.1| - 0.1 12.2 0.2 0.15 11.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1870) Hormone_1 PF00103.15 gi|518651690|ref|YP_008141210.1| - 0.1 11.8 0.9 0.097 11.9 0.7 1.1 1 0 0 1 1 1 0 Somatotropin hormone family M11L PF11099.3 gi|518651690|ref|YP_008141210.1| - 0.15 11.7 2.7 0.28 10.8 0.9 1.7 1 1 1 2 2 2 0 Apoptosis regulator M11L like Fib_alpha PF08702.5 gi|518651690|ref|YP_008141210.1| - 0.16 12.1 1.4 0.16 12.0 1.0 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family PhoU PF01895.14 gi|518651690|ref|YP_008141210.1| - 0.53 10.7 4.8 0.81 10.1 3.3 1.4 1 1 0 1 1 1 0 PhoU domain ILVD_EDD PF00920.16 gi|518651691|ref|YP_008141211.1| - 1.3e-210 700.2 4.6 1.5e-210 700.0 3.2 1.0 1 0 0 1 1 1 1 Dehydratase family TPP_enzyme_N PF02776.13 gi|518651692|ref|YP_008141212.1| - 8.1e-57 191.4 0.0 6.7e-55 185.2 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518651692|ref|YP_008141212.1| - 2e-41 141.1 1.7 2.7e-41 140.6 0.1 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|518651692|ref|YP_008141212.1| - 8.9e-33 112.9 0.0 2.2e-32 111.6 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.14 gi|518651692|ref|YP_008141212.1| - 0.00077 19.0 0.4 0.0015 18.0 0.1 1.6 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CO_dh PF02552.11 gi|518651692|ref|YP_008141212.1| - 0.033 13.7 0.1 0.15 11.6 0.1 2.0 1 1 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit ACT_5 PF13710.1 gi|518651693|ref|YP_008141213.1| - 1.6e-05 24.6 0.0 2.4e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 ACT domain IlvN PF07991.7 gi|518651694|ref|YP_008141214.1| - 1.4e-67 226.1 0.1 2.1e-67 225.5 0.1 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|518651694|ref|YP_008141214.1| - 4.4e-40 136.9 0.5 6.6e-40 136.3 0.4 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 gi|518651694|ref|YP_008141214.1| - 2.9e-08 34.0 0.0 6.4e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|518651694|ref|YP_008141214.1| - 1.8e-05 24.6 0.0 3.1e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518651694|ref|YP_008141214.1| - 5.6e-05 22.3 0.0 0.00011 21.4 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|518651694|ref|YP_008141214.1| - 0.0013 18.7 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 NADH(P)-binding NAD_Gly3P_dh_N PF01210.18 gi|518651694|ref|YP_008141214.1| - 0.007 16.1 1.2 0.075 12.7 0.2 2.6 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|518651694|ref|YP_008141214.1| - 0.0085 15.5 0.0 0.017 14.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.1 gi|518651694|ref|YP_008141214.1| - 0.13 12.5 0.0 0.32 11.2 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF202 PF02656.10 gi|518651695|ref|YP_008141215.1| - 1.1e-20 73.6 0.9 2.5e-19 69.2 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) DUF2910 PF11139.3 gi|518651695|ref|YP_008141215.1| - 0.0014 17.7 0.0 0.002 17.2 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2910) DUF4184 PF13803.1 gi|518651695|ref|YP_008141215.1| - 0.0062 15.8 0.8 0.0066 15.7 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4184) SdpI PF13630.1 gi|518651695|ref|YP_008141215.1| - 0.0069 16.0 8.4 0.055 13.1 1.3 2.2 1 1 0 2 2 2 2 SdpI/YhfL protein family Tetraspannin PF00335.15 gi|518651695|ref|YP_008141215.1| - 0.015 14.6 5.4 0.019 14.2 1.0 1.9 1 1 1 2 2 2 0 Tetraspanin family DUF973 PF06157.6 gi|518651695|ref|YP_008141215.1| - 0.038 12.9 5.6 0.044 12.7 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) MscS_TM PF12794.2 gi|518651695|ref|YP_008141215.1| - 0.054 12.0 0.9 0.059 11.9 0.6 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF2975 PF11188.3 gi|518651695|ref|YP_008141215.1| - 0.19 11.4 5.4 0.66 9.6 3.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) Arif-1 PF06770.6 gi|518651695|ref|YP_008141215.1| - 0.25 10.6 2.5 0.28 10.5 1.7 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) zf-DHHC PF01529.15 gi|518651695|ref|YP_008141215.1| - 0.41 10.0 5.2 0.6 9.4 3.6 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase CD20 PF04103.10 gi|518651695|ref|YP_008141215.1| - 1.4 8.8 6.5 3.5 7.5 1.2 2.1 1 1 1 2 2 2 0 CD20-like family DUF2207 PF09972.4 gi|518651695|ref|YP_008141215.1| - 3.4 6.1 8.5 1.7 7.1 0.2 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DHODB_Fe-S_bind PF10418.4 gi|518651697|ref|YP_008141217.1| - 7.4e-12 44.5 0.6 1.3e-11 43.7 0.4 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.16 gi|518651697|ref|YP_008141217.1| - 2.5e-08 34.4 0.1 5.1e-08 33.4 0.1 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 gi|518651697|ref|YP_008141217.1| - 0.00017 21.6 0.0 0.0003 20.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain DHO_dh PF01180.16 gi|518651698|ref|YP_008141218.1| - 3.1e-60 203.6 8.3 3.8e-60 203.3 5.8 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|518651698|ref|YP_008141218.1| - 2.3e-09 36.5 0.2 3e-07 29.5 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|518651698|ref|YP_008141218.1| - 0.00018 20.8 0.6 0.0084 15.3 0.1 2.5 2 1 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|518651698|ref|YP_008141218.1| - 0.0019 17.1 0.8 0.0025 16.7 0.6 1.3 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain PcrB PF01884.12 gi|518651698|ref|YP_008141218.1| - 0.0045 16.2 0.8 0.008 15.4 0.6 1.4 1 0 0 1 1 1 1 PcrB family NMO PF03060.10 gi|518651698|ref|YP_008141218.1| - 1.2 8.1 6.3 0.062 12.4 0.7 1.6 2 1 0 2 2 2 0 Nitronate monooxygenase Imm9 PF15561.1 gi|518651700|ref|YP_008141220.1| - 0.0075 15.8 0.7 0.016 14.8 0.5 1.5 1 0 0 1 1 1 1 Immunity protein 9 Hormone_3 PF00159.13 gi|518651700|ref|YP_008141220.1| - 0.013 15.4 0.1 1.6 8.8 0.0 2.5 2 0 0 2 2 2 0 Pancreatic hormone peptide UDG PF03167.14 gi|518651701|ref|YP_008141221.1| - 2.6e-31 108.1 0.0 4e-31 107.5 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily NUDIX PF00293.23 gi|518651701|ref|YP_008141221.1| - 2.4e-11 43.4 0.0 4.2e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain MFS_1 PF07690.11 gi|518651702|ref|YP_008141222.1| - 4.8e-16 58.4 43.0 4.8e-16 58.4 29.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518651702|ref|YP_008141222.1| - 1.7e-07 30.0 7.4 1.7e-07 30.0 5.2 3.3 2 1 1 4 4 4 1 MFS/sugar transport protein VIT1 PF01988.14 gi|518651703|ref|YP_008141223.1| - 1.9e-11 43.9 18.3 1.2e-08 34.7 5.7 2.0 1 1 1 2 2 2 2 VIT family DUF2207 PF09972.4 gi|518651703|ref|YP_008141223.1| - 1.2 7.5 4.2 1.5 7.2 2.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF211 PF02680.9 gi|518651704|ref|YP_008141224.1| - 5.4e-30 103.0 2.3 5.9e-30 102.9 1.6 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Glycos_transf_1 PF00534.15 gi|518651705|ref|YP_008141225.1| - 2.7e-19 69.2 0.1 6.7e-19 67.9 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518651705|ref|YP_008141225.1| - 1.5e-08 34.8 0.0 3.1e-08 33.8 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Lactamase_B_3 PF13483.1 gi|518651706|ref|YP_008141226.1| - 3.7e-27 95.0 0.1 4.5e-27 94.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|518651706|ref|YP_008141226.1| - 1.6e-23 83.3 0.3 1.9e-23 83.0 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|518651706|ref|YP_008141226.1| - 2.8e-11 43.4 1.4 6.2e-11 42.3 1.0 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily AAA_10 PF12846.2 gi|518651707|ref|YP_008141227.1| - 1.3e-21 77.3 2.1 4.8e-13 49.2 0.2 2.2 1 1 1 2 2 2 2 AAA-like domain DUF87 PF01935.12 gi|518651707|ref|YP_008141227.1| - 1.5e-07 31.4 0.2 4.7e-07 29.8 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|518651707|ref|YP_008141227.1| - 0.00021 21.4 0.1 0.0022 18.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|518651707|ref|YP_008141227.1| - 0.00066 20.5 0.2 0.0024 18.6 0.1 2.1 2 0 0 2 2 1 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|518651707|ref|YP_008141227.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_18 PF13238.1 gi|518651707|ref|YP_008141227.1| - 0.018 15.3 0.0 0.053 13.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain CobU PF02283.11 gi|518651707|ref|YP_008141227.1| - 0.02 14.2 0.2 0.052 12.9 0.0 1.7 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_14 PF13173.1 gi|518651707|ref|YP_008141227.1| - 0.023 14.6 3.0 1 9.2 0.0 3.3 3 1 0 3 3 3 0 AAA domain Sigma54_activat PF00158.21 gi|518651707|ref|YP_008141227.1| - 0.029 13.8 0.0 0.054 12.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|518651707|ref|YP_008141227.1| - 0.038 13.4 0.0 0.087 12.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activ_2 PF14532.1 gi|518651707|ref|YP_008141227.1| - 0.043 13.8 0.0 0.084 12.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF2075 PF09848.4 gi|518651707|ref|YP_008141227.1| - 0.047 12.6 0.1 0.24 10.3 0.1 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DEAD PF00270.24 gi|518651707|ref|YP_008141227.1| - 0.058 12.8 0.1 6.1 6.3 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase TrwB_AAD_bind PF10412.4 gi|518651707|ref|YP_008141227.1| - 0.064 11.8 0.0 0.13 10.8 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain T2SE PF00437.15 gi|518651707|ref|YP_008141227.1| - 0.076 11.9 0.0 0.14 11.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.7 gi|518651707|ref|YP_008141227.1| - 0.095 12.3 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.1 gi|518651707|ref|YP_008141227.1| - 0.097 12.6 0.0 0.25 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_33 PF13671.1 gi|518651707|ref|YP_008141227.1| - 0.15 11.9 0.0 0.34 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mtp PF03821.11 gi|518651709|ref|YP_008141229.1| - 0.0075 15.6 0.3 0.0087 15.4 0.2 1.0 1 0 0 1 1 1 1 Golgi 4-transmembrane spanning transporter DUF4199 PF13858.1 gi|518651709|ref|YP_008141229.1| - 6.5 6.6 9.2 3.6 7.4 2.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF72 PF01904.13 gi|518651710|ref|YP_008141230.1| - 1e-51 175.8 0.0 1.2e-51 175.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 YolD PF08863.5 gi|518651710|ref|YP_008141230.1| - 0.12 12.2 0.1 0.24 11.2 0.1 1.5 1 0 0 1 1 1 0 YolD-like protein MethyltransfD12 PF02086.10 gi|518651711|ref|YP_008141231.1| - 9.2e-25 87.5 4.1 1.1e-24 87.3 2.8 1.1 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.10 gi|518651711|ref|YP_008141231.1| - 0.00052 19.4 0.0 0.15 11.4 0.0 2.2 2 0 0 2 2 2 2 Conserved hypothetical protein 95 Acyl-CoA_dh_1 PF00441.19 gi|518651712|ref|YP_008141232.1| - 5.6e-28 97.9 0.0 8.8e-28 97.2 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|518651712|ref|YP_008141232.1| - 3.3e-11 42.5 0.6 7.1e-11 41.4 0.4 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.6 gi|518651712|ref|YP_008141232.1| - 5.3e-06 26.7 0.0 9.3e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain AMP-binding PF00501.23 gi|518651713|ref|YP_008141233.1| - 3.8e-67 226.4 0.0 4.6e-67 226.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651713|ref|YP_008141233.1| - 9.6e-12 45.6 0.0 1.8e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MFS_1 PF07690.11 gi|518651714|ref|YP_008141234.1| - 2.2e-34 118.7 72.9 7.2e-30 103.8 30.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Lactamase_B PF00753.22 gi|518651715|ref|YP_008141235.1| - 1.2e-19 70.7 0.1 3.5e-19 69.2 0.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|518651715|ref|YP_008141235.1| - 2.7e-06 27.0 0.0 3.5e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF3015 PF11220.3 gi|518651716|ref|YP_008141236.1| - 0.097 12.2 1.4 0.13 11.8 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3015) DUF302 PF03625.9 gi|518651717|ref|YP_008141237.1| - 1.8e-14 53.0 0.0 2.6e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 Rieske PF00355.21 gi|518651718|ref|YP_008141238.1| - 1.8e-16 59.4 0.0 2e-16 59.3 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|518651718|ref|YP_008141238.1| - 2.4e-08 33.6 0.0 3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FXa_inhibition PF14670.1 gi|518651718|ref|YP_008141238.1| - 0.15 12.2 1.0 0.25 11.4 0.7 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site ECH PF00378.15 gi|518651719|ref|YP_008141239.1| - 4.8e-47 160.1 0.0 5.4e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family MFS_1 PF07690.11 gi|518651720|ref|YP_008141240.1| - 7.5e-42 143.2 53.5 7.5e-42 143.2 37.1 2.6 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651720|ref|YP_008141240.1| - 5.8e-10 38.3 18.5 5.8e-10 38.3 12.8 3.2 2 1 0 3 3 3 1 Sugar (and other) transporter NPCBM_assoc PF10633.4 gi|518651721|ref|YP_008141241.1| - 2.8e-05 24.0 0.4 0.029 14.4 0.1 3.8 3 1 0 3 3 3 1 NPCBM-associated, NEW3 domain of alpha-galactosidase Alpha_adaptinC2 PF02883.15 gi|518651721|ref|YP_008141241.1| - 0.017 15.4 8.3 0.98 9.7 0.3 2.8 2 1 0 2 2 2 0 Adaptin C-terminal domain 4HB_MCP_1 PF12729.2 gi|518651721|ref|YP_008141241.1| - 0.057 12.7 4.9 0.058 12.7 0.2 3.0 3 0 0 3 3 3 0 Four helix bundle sensory module for signal transduction PadR PF03551.9 gi|518651722|ref|YP_008141242.1| - 5.8e-10 38.7 0.3 1.5e-09 37.5 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|518651722|ref|YP_008141242.1| - 0.0018 18.0 0.0 0.0043 16.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.1 gi|518651722|ref|YP_008141242.1| - 0.0019 17.8 0.1 0.0036 16.9 0.0 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) S10_plectin PF03501.10 gi|518651722|ref|YP_008141242.1| - 0.0085 15.9 0.0 0.023 14.5 0.0 1.7 2 0 0 2 2 2 1 Plectin/S10 domain DUF3850 PF12961.2 gi|518651722|ref|YP_008141242.1| - 0.41 10.6 3.5 1.2 9.1 0.4 2.7 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3850) OrfB_Zn_ribbon PF07282.6 gi|518651723|ref|YP_008141243.1| - 4.4e-05 23.0 0.1 6.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|518651723|ref|YP_008141243.1| - 0.00028 20.6 0.9 0.00036 20.2 0.6 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_3 PF07649.7 gi|518651723|ref|YP_008141243.1| - 0.0017 18.3 0.7 0.018 15.0 0.0 2.1 2 0 0 2 2 2 1 C1-like domain Zn-ribbon_8 PF09723.5 gi|518651723|ref|YP_008141243.1| - 0.0036 17.2 0.3 1.2 9.1 0.0 2.3 2 0 0 2 2 2 2 Zinc ribbon domain C1_1 PF00130.17 gi|518651723|ref|YP_008141243.1| - 0.034 13.8 0.1 0.046 13.4 0.1 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ribosomal_L37ae PF01780.14 gi|518651723|ref|YP_008141243.1| - 0.038 13.8 0.1 0.043 13.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family Hormone_6 PF00236.13 gi|518651723|ref|YP_008141243.1| - 0.044 13.6 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein hormone UPF0547 PF10571.4 gi|518651723|ref|YP_008141243.1| - 0.044 13.4 3.2 1 9.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 C1_2 PF03107.11 gi|518651723|ref|YP_008141243.1| - 0.055 13.5 0.5 0.1 12.7 0.0 1.7 2 0 0 2 2 2 0 C1 domain zf-C4_Topoisom PF01396.14 gi|518651723|ref|YP_008141243.1| - 0.075 12.5 0.7 3.7 7.1 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DZR PF12773.2 gi|518651723|ref|YP_008141243.1| - 0.076 12.8 1.1 0.16 11.8 0.7 1.6 1 1 0 1 1 1 0 Double zinc ribbon Cache_1 PF02743.13 gi|518651723|ref|YP_008141243.1| - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Cache domain PhnA_Zn_Ribbon PF08274.7 gi|518651723|ref|YP_008141243.1| - 0.12 12.1 2.1 7.5 6.4 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.1 gi|518651723|ref|YP_008141243.1| - 0.15 11.2 1.6 0.49 9.6 0.1 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|518651723|ref|YP_008141243.1| - 0.16 12.2 0.7 0.34 11.2 0.5 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-NADH-PPase PF09297.6 gi|518651723|ref|YP_008141243.1| - 0.27 10.8 1.6 0.81 9.2 0.1 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TFIIS_C PF01096.13 gi|518651723|ref|YP_008141243.1| - 0.3 10.7 2.0 17 5.1 0.0 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_2 PF13240.1 gi|518651723|ref|YP_008141243.1| - 0.6 9.6 0.1 0.6 9.6 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain RRN7 PF11781.3 gi|518651723|ref|YP_008141243.1| - 0.69 9.4 3.4 4.1 6.9 0.1 2.3 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 DUF1610 PF07754.6 gi|518651723|ref|YP_008141243.1| - 3.7 7.7 6.5 7 6.8 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) CbiJ PF02571.9 gi|518651724|ref|YP_008141244.1| - 4e-53 180.3 0.0 4.4e-53 180.1 0.0 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK CbiC PF02570.10 gi|518651725|ref|YP_008141245.1| - 8.2e-51 172.2 0.1 9.3e-51 172.0 0.0 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase CbiD PF01888.12 gi|518651726|ref|YP_008141246.1| - 1.6e-82 276.4 0.4 2.3e-82 275.8 0.3 1.2 1 0 0 1 1 1 1 CbiD AA_permease_2 PF13520.1 gi|518651727|ref|YP_008141247.1| - 2.2e-39 135.2 65.3 2.2e-39 135.2 45.2 1.9 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518651727|ref|YP_008141247.1| - 2.8e-27 95.2 65.4 2.8e-27 95.2 45.3 2.1 1 1 1 2 2 2 1 Amino acid permease Iso_dh PF00180.15 gi|518651729|ref|YP_008141249.1| - 1.1e-97 327.1 0.2 1.3e-97 326.9 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase AA_permease_2 PF13520.1 gi|518651730|ref|YP_008141250.1| - 1.4e-55 188.6 57.4 1.6e-55 188.3 39.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|518651730|ref|YP_008141250.1| - 3.9e-52 177.1 55.1 4.8e-52 176.8 38.2 1.1 1 0 0 1 1 1 1 Amino acid permease Trp_Tyr_perm PF03222.8 gi|518651730|ref|YP_008141250.1| - 0.00054 18.8 37.2 0.00092 18.1 25.7 1.5 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family COXG PF06240.8 gi|518651731|ref|YP_008141251.1| - 0.0018 17.9 0.0 0.0027 17.3 0.0 1.3 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.4 gi|518651731|ref|YP_008141251.1| - 0.0074 16.4 0.0 0.0075 16.4 0.0 1.4 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.15 gi|518651731|ref|YP_008141251.1| - 0.025 14.5 0.0 0.028 14.4 0.0 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport E1_dh PF00676.15 gi|518651732|ref|YP_008141252.1| - 5.7e-76 255.1 0.0 1.1e-75 254.2 0.0 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component Transket_pyr PF02779.19 gi|518651732|ref|YP_008141252.1| - 1.9e-41 141.5 0.0 3.7e-41 140.5 0.0 1.5 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.15 gi|518651732|ref|YP_008141252.1| - 4.5e-36 123.5 0.0 9e-36 122.5 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.1 gi|518651732|ref|YP_008141252.1| - 1.7e-08 33.7 0.0 3.3e-08 32.8 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.16 gi|518651732|ref|YP_008141252.1| - 2e-08 33.9 0.0 2.8e-07 30.2 0.0 2.5 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Transketolase_N PF00456.16 gi|518651732|ref|YP_008141252.1| - 2.2e-05 23.4 0.0 3.8e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Biotin_lipoyl PF00364.17 gi|518651733|ref|YP_008141253.1| - 2.1e-12 46.5 1.7 2.4e-12 46.3 1.2 1.1 1 0 0 1 1 1 1 Biotin-requiring enzyme GCV_H PF01597.14 gi|518651733|ref|YP_008141253.1| - 0.013 15.1 0.2 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 Glycine cleavage H-protein Biotin_lipoyl_2 PF13533.1 gi|518651733|ref|YP_008141253.1| - 0.04 13.5 0.4 0.27 10.9 0.0 2.1 2 0 0 2 2 2 0 Biotin-lipoyl like Thermopsin PF05317.6 gi|518651734|ref|YP_008141254.1| - 3.8e-57 193.2 23.1 3.8e-57 193.2 16.0 2.6 2 1 0 2 2 2 1 Thermopsin DUF4399 PF14347.1 gi|518651734|ref|YP_008141254.1| - 0.073 13.0 0.2 1.7 8.6 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4399) Wzt_C PF14524.1 gi|518651734|ref|YP_008141254.1| - 0.22 11.2 3.3 1.4 8.6 0.9 2.9 2 0 0 2 2 2 0 Wzt C-terminal domain FliC PF12445.3 gi|518651734|ref|YP_008141254.1| - 0.58 10.2 10.6 0.16 12.1 0.7 2.9 2 1 1 3 3 3 0 Flagellin protein ECH PF00378.15 gi|518651735|ref|YP_008141255.1| - 1.7e-40 138.6 0.4 1.9e-40 138.5 0.3 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family Peptidase_S49 PF01343.13 gi|518651735|ref|YP_008141255.1| - 0.0031 17.3 0.5 0.044 13.5 0.1 2.2 2 0 0 2 2 2 1 Peptidase family S49 UPF0150 PF03681.10 gi|518651735|ref|YP_008141255.1| - 0.093 12.3 0.4 0.33 10.6 0.1 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0150) HpaB_N PF11794.3 gi|518651736|ref|YP_008141256.1| - 2.7e-77 259.7 1.5 4.1e-77 259.1 1.0 1.3 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.8 gi|518651736|ref|YP_008141256.1| - 7e-44 149.1 0.1 9.7e-44 148.6 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal AMP-binding PF00501.23 gi|518651737|ref|YP_008141257.1| - 1e-92 310.7 0.0 1.2e-92 310.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518651737|ref|YP_008141257.1| - 1.2e-16 61.3 0.0 2.8e-16 60.2 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MFS_1 PF07690.11 gi|518651738|ref|YP_008141258.1| - 2.7e-52 177.6 47.6 2.7e-52 177.6 33.0 1.9 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651738|ref|YP_008141258.1| - 4.6e-11 41.9 38.6 7.7e-10 37.9 11.1 2.8 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|518651738|ref|YP_008141258.1| - 0.24 9.4 20.1 0.004 15.3 4.5 3.0 3 1 0 3 3 3 0 Transmembrane secretion effector DUF309 PF03745.9 gi|518651739|ref|YP_008141259.1| - 2.9e-16 58.6 0.1 5.2e-16 57.8 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF309) IMS PF00817.15 gi|518651740|ref|YP_008141260.1| - 6.3e-34 116.9 0.0 1e-33 116.2 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_HHH PF11798.3 gi|518651740|ref|YP_008141260.1| - 5.3e-07 29.3 0.8 1e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 IMS family HHH motif HHH_5 PF14520.1 gi|518651740|ref|YP_008141260.1| - 0.00062 19.8 0.0 0.0021 18.2 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix domain BAF PF02961.9 gi|518651740|ref|YP_008141260.1| - 0.021 15.1 0.0 0.063 13.5 0.0 1.8 1 0 0 1 1 1 0 Barrier to autointegration factor DUF4277 PF14104.1 gi|518651740|ref|YP_008141260.1| - 0.025 14.7 0.2 0.051 13.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4277) Cdd1 PF11731.3 gi|518651740|ref|YP_008141260.1| - 0.035 14.0 0.1 0.083 12.8 0.0 1.7 1 1 0 1 1 1 0 Pathogenicity locus IMS_C PF11799.3 gi|518651740|ref|YP_008141260.1| - 0.044 13.7 0.0 3.9 7.4 0.0 2.5 2 0 0 2 2 2 0 impB/mucB/samB family C-terminal domain DFP PF04127.10 gi|518651741|ref|YP_008141261.1| - 5.1e-29 101.2 0.0 1.1e-28 100.0 0.0 1.6 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|518651741|ref|YP_008141261.1| - 2.8e-22 78.7 0.2 4.9e-22 77.9 0.1 1.4 1 0 0 1 1 1 1 Flavoprotein DUF1479 PF07350.7 gi|518651741|ref|YP_008141261.1| - 0.11 10.9 0.0 0.39 9.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1479) DUF3186 PF11382.3 gi|518651741|ref|YP_008141261.1| - 0.13 11.4 0.0 2.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3186) TrmB PF01978.14 gi|518651742|ref|YP_008141262.1| - 3.6e-20 71.4 0.0 9.7e-20 70.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|518651742|ref|YP_008141262.1| - 0.00011 21.2 0.0 0.00015 20.7 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.5 gi|518651742|ref|YP_008141262.1| - 0.00096 18.6 0.0 0.0021 17.6 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain PLDc_2 PF13091.1 gi|518651742|ref|YP_008141262.1| - 0.043 13.5 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 PLD-like domain Rrf2 PF02082.15 gi|518651742|ref|YP_008141262.1| - 0.13 12.3 0.0 0.38 10.8 0.0 1.8 1 1 1 2 2 2 0 Transcriptional regulator AP_endonuc_2 PF01261.19 gi|518651743|ref|YP_008141263.1| - 3.2e-27 95.2 0.0 3.8e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.9 gi|518651743|ref|YP_008141263.1| - 0.00094 18.2 0.0 0.0012 17.9 0.0 1.1 1 0 0 1 1 1 1 UV-endonuclease UvdE DUF1015 PF06245.6 gi|518651744|ref|YP_008141264.1| - 2.4e-66 223.9 0.0 2.7e-66 223.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) ParBc PF02195.13 gi|518651744|ref|YP_008141264.1| - 0.031 14.3 0.3 0.33 11.0 0.2 2.3 1 1 0 1 1 1 0 ParB-like nuclease domain DUF3687 PF12459.3 gi|518651745|ref|YP_008141265.1| - 0.88 8.8 4.3 1.4 8.2 3.0 1.3 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein Pho86 PF11124.3 gi|518651747|ref|YP_008141267.1| - 0.069 12.1 0.7 0.076 11.9 0.5 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 YadA_head PF05658.9 gi|518651748|ref|YP_008141268.1| - 0.064 13.5 5.5 1 9.7 0.3 2.5 2 0 0 2 2 2 0 Head domain of trimeric autotransporter adhesin MAF_flag10 PF01973.13 gi|518651749|ref|YP_008141269.1| - 0.051 13.0 0.0 0.055 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF115 Agglutinin PF07468.6 gi|518651749|ref|YP_008141269.1| - 0.073 13.0 0.1 0.074 13.0 0.0 1.1 1 0 0 1 1 1 0 Agglutinin HxlR PF01638.12 gi|518651751|ref|YP_008141271.1| - 3.7e-16 58.5 0.0 4.1e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|518651751|ref|YP_008141271.1| - 0.0011 18.7 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|518651751|ref|YP_008141271.1| - 0.0062 16.3 0.1 0.0069 16.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix Dexa_ind PF15198.1 gi|518651752|ref|YP_008141272.1| - 6.3 6.7 10.9 0.11 12.3 1.1 2.7 2 1 1 3 3 3 0 Dexamethasone-induced UbiD PF01977.11 gi|518651753|ref|YP_008141273.1| - 3.8e-147 489.9 1.3 4.4e-147 489.7 0.9 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Methyltransf_11 PF08241.7 gi|518651754|ref|YP_008141274.1| - 1.2e-15 57.7 0.0 1.7e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518651754|ref|YP_008141274.1| - 1.2e-13 51.0 0.0 1.5e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518651754|ref|YP_008141274.1| - 1.3e-13 50.8 0.0 1.6e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518651754|ref|YP_008141274.1| - 1.9e-11 44.5 0.0 2.6e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518651754|ref|YP_008141274.1| - 1.6e-10 41.3 0.0 2.4e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518651754|ref|YP_008141274.1| - 2.4e-09 36.7 0.0 3.3e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.1 gi|518651754|ref|YP_008141274.1| - 3.9e-09 36.7 0.0 5.7e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518651754|ref|YP_008141274.1| - 5.6e-06 25.6 0.0 7e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.9 gi|518651754|ref|YP_008141274.1| - 5.9e-05 22.3 0.0 7.3e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_4 PF02390.12 gi|518651754|ref|YP_008141274.1| - 0.00018 20.6 0.0 0.00036 19.6 0.0 1.4 2 0 0 2 2 2 1 Putative methyltransferase PrmA PF06325.8 gi|518651754|ref|YP_008141274.1| - 0.00028 20.1 0.0 0.00039 19.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|518651754|ref|YP_008141274.1| - 0.00032 20.7 0.0 0.00045 20.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|518651754|ref|YP_008141274.1| - 0.00074 18.4 0.0 0.0017 17.2 0.0 1.3 1 1 0 1 1 1 1 DREV methyltransferase Methyltransf_2 PF00891.13 gi|518651754|ref|YP_008141274.1| - 0.0026 16.9 0.0 0.0045 16.2 0.0 1.6 1 1 0 1 1 1 1 O-methyltransferase FtsJ PF01728.14 gi|518651754|ref|YP_008141274.1| - 0.0072 16.3 0.0 0.012 15.6 0.0 1.4 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_PK PF05891.7 gi|518651754|ref|YP_008141274.1| - 0.011 15.0 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase CMAS PF02353.15 gi|518651754|ref|YP_008141274.1| - 0.011 14.7 0.0 0.015 14.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.15 gi|518651754|ref|YP_008141274.1| - 0.025 13.6 0.0 0.036 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Rsm22 PF09243.5 gi|518651754|ref|YP_008141274.1| - 0.037 13.0 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 GidB PF02527.10 gi|518651754|ref|YP_008141274.1| - 0.11 11.6 0.0 0.22 10.6 0.0 1.5 2 0 0 2 2 2 0 rRNA small subunit methyltransferase G Methyltransf_32 PF13679.1 gi|518651754|ref|YP_008141274.1| - 0.12 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.6 gi|518651754|ref|YP_008141274.1| - 0.17 10.8 0.0 0.22 10.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) RNA_POL_M_15KD PF02150.11 gi|518651755|ref|YP_008141275.1| - 0.17 11.5 0.7 1.2 8.8 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit NTP_transf_3 PF12804.2 gi|518651756|ref|YP_008141276.1| - 1.8e-11 44.3 0.0 2.7e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.18 gi|518651756|ref|YP_008141276.1| - 0.00016 21.0 0.7 0.0045 16.3 0.5 2.2 1 1 0 1 1 1 1 Nucleotidyl transferase IspD PF01128.14 gi|518651756|ref|YP_008141276.1| - 0.029 13.8 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HD PF01966.17 gi|518651757|ref|YP_008141277.1| - 6.8e-11 42.2 0.0 1.2e-10 41.3 0.0 1.5 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 gi|518651757|ref|YP_008141277.1| - 0.00069 18.9 0.0 0.0013 18.0 0.0 1.3 1 0 0 1 1 1 1 HDOD domain UvrD-helicase PF00580.16 gi|518651759|ref|YP_008141279.1| - 2.6e-27 95.9 8.0 2.6e-27 95.9 5.5 3.5 2 2 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|518651759|ref|YP_008141279.1| - 8.5e-21 74.7 3.4 8.5e-21 74.7 2.4 3.9 3 1 0 3 3 3 1 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.2 gi|518651759|ref|YP_008141279.1| - 3.5e-13 49.5 0.3 6.7e-13 48.5 0.2 1.4 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_19 PF13245.1 gi|518651759|ref|YP_008141279.1| - 1.9e-08 33.9 0.0 4.8e-08 32.6 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain AAA_11 PF13086.1 gi|518651759|ref|YP_008141279.1| - 8.4e-07 28.8 0.7 0.002 17.7 0.0 3.6 3 1 0 3 3 3 2 AAA domain UvrD_C_2 PF13538.1 gi|518651759|ref|YP_008141279.1| - 9.9e-07 28.8 0.2 1.8e-05 24.8 0.0 3.1 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.13 gi|518651759|ref|YP_008141279.1| - 1.1e-05 25.1 0.4 0.72 9.3 0.0 3.9 3 1 0 3 3 3 2 Viral (Superfamily 1) RNA helicase AAA_12 PF13087.1 gi|518651759|ref|YP_008141279.1| - 1.4e-05 24.6 9.0 0.15 11.4 0.1 4.9 3 2 1 4 4 4 2 AAA domain Phage_hub_GP28 PF11110.3 gi|518651759|ref|YP_008141279.1| - 0.0038 16.9 0.4 0.14 11.8 0.1 2.9 2 0 0 2 2 2 1 Baseplate hub distal subunit AAA PF00004.24 gi|518651759|ref|YP_008141279.1| - 0.0099 16.0 3.9 0.078 13.1 0.0 3.4 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) Cas_Cas4 PF01930.12 gi|518651759|ref|YP_008141279.1| - 0.012 15.5 1.7 0.017 15.0 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF83 DEAD PF00270.24 gi|518651759|ref|YP_008141279.1| - 0.013 15.0 0.0 0.03 13.7 0.0 1.7 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_30 PF13604.1 gi|518651759|ref|YP_008141279.1| - 0.025 14.1 0.0 0.082 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain Pectate_lyase_3 PF12708.2 gi|518651760|ref|YP_008141280.1| - 5.8e-06 26.5 16.1 5.8e-06 26.5 11.1 2.3 1 1 1 2 2 2 2 Pectate lyase superfamily protein Beta_helix PF13229.1 gi|518651760|ref|YP_008141280.1| - 0.00012 21.9 36.2 0.00012 21.9 25.1 3.0 1 1 2 3 3 3 2 Right handed beta helix region Topoisom_bac PF01131.15 gi|518651763|ref|YP_008141283.1| - 4.2e-112 374.9 0.3 5.5e-112 374.5 0.2 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.14 gi|518651763|ref|YP_008141283.1| - 4.4e-13 48.4 0.6 4.4e-13 48.4 0.4 3.4 3 0 0 3 3 3 1 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.17 gi|518651763|ref|YP_008141283.1| - 2.4e-12 46.6 0.1 8.5e-12 44.9 0.1 2.0 2 0 0 2 2 2 1 Toprim domain Auto_anti-p27 PF06677.7 gi|518651763|ref|YP_008141283.1| - 0.042 13.6 4.0 4.1 7.2 1.0 2.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_4 PF13662.1 gi|518651763|ref|YP_008141283.1| - 0.062 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Toprim domain FmrO PF07091.6 gi|518651763|ref|YP_008141283.1| - 0.11 11.5 0.0 4.5 6.1 0.0 2.9 3 0 0 3 3 3 0 Ribosomal RNA methyltransferase (FmrO) Synaptobrevin PF00957.16 gi|518651763|ref|YP_008141283.1| - 0.11 12.0 0.4 0.34 10.5 0.2 1.8 2 0 0 2 2 2 0 Synaptobrevin DUF1119 PF06550.6 gi|518651764|ref|YP_008141284.1| - 7.2e-60 202.5 36.2 8.3e-60 202.3 25.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1119) DUF2583 PF10762.4 gi|518651764|ref|YP_008141284.1| - 4.4 7.4 8.3 1.6 8.9 3.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) SurA_N_3 PF13624.1 gi|518651764|ref|YP_008141284.1| - 9.4 6.2 7.4 24 4.8 0.1 2.6 2 1 0 2 2 2 0 SurA N-terminal domain AICARFT_IMPCHas PF01808.13 gi|518651765|ref|YP_008141285.1| - 3.3e-95 318.8 1.2 4.3e-95 318.4 0.9 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.17 gi|518651765|ref|YP_008141285.1| - 4.9e-14 52.0 0.0 1.2e-13 50.8 0.0 1.7 1 0 0 1 1 1 1 MGS-like domain DNA_pol_B_thumb PF14791.1 gi|518651766|ref|YP_008141286.1| - 2.2e-21 75.3 0.0 4.9e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 DNA polymerase beta thumb PHP PF02811.14 gi|518651766|ref|YP_008141286.1| - 2.3e-16 60.0 1.5 1.6e-15 57.3 0.3 2.5 2 0 0 2 2 2 1 PHP domain HHH_8 PF14716.1 gi|518651766|ref|YP_008141286.1| - 9e-15 54.6 0.3 1.1e-12 47.9 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_5 PF14520.1 gi|518651766|ref|YP_008141286.1| - 4.6e-13 49.1 0.7 7e-08 32.5 0.4 2.9 2 0 0 2 2 2 2 Helix-hairpin-helix domain DNA_pol_B_palm PF14792.1 gi|518651766|ref|YP_008141286.1| - 1e-05 25.5 1.0 0.00019 21.4 0.0 2.5 2 0 0 2 2 2 1 DNA polymerase beta palm HHH_2 PF12826.2 gi|518651766|ref|YP_008141286.1| - 0.00056 19.7 0.1 0.75 9.7 0.0 3.0 3 0 0 3 3 3 2 Helix-hairpin-helix motif IMS_HHH PF11798.3 gi|518651766|ref|YP_008141286.1| - 0.0013 18.6 0.3 0.096 12.7 0.0 2.8 2 0 0 2 2 2 1 IMS family HHH motif HHH PF00633.18 gi|518651766|ref|YP_008141286.1| - 0.0065 16.1 0.6 0.46 10.2 0.1 3.0 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|518651766|ref|YP_008141286.1| - 0.18 11.8 1.4 3.4 7.6 0.1 3.4 3 1 1 4 4 4 0 Helix-hairpin-helix motif Penicil_amidase PF01804.13 gi|518651767|ref|YP_008141287.1| - 6.1e-179 597.5 5.2 7.8e-179 597.1 3.6 1.0 1 0 0 1 1 1 1 Penicillin amidase YIF1 PF03878.10 gi|518651768|ref|YP_008141288.1| - 1.1 8.3 6.9 1.4 8.0 4.8 1.3 1 1 0 1 1 1 0 YIF1 AdoMet_Synthase PF01941.14 gi|518651771|ref|YP_008141291.1| - 9.2e-170 564.3 3.0 1e-169 564.2 2.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Trigger_N PF05697.8 gi|518651771|ref|YP_008141291.1| - 0.023 14.4 0.3 0.083 12.6 0.2 1.9 1 1 0 1 1 1 0 Bacterial trigger factor protein (TF) Acetyltransf_1 PF00583.19 gi|518651772|ref|YP_008141292.1| - 4.6e-11 42.6 0.1 6.8e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518651772|ref|YP_008141292.1| - 1.8e-09 37.7 0.0 2.2e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|518651772|ref|YP_008141292.1| - 1.5e-07 31.4 0.1 2.4e-07 30.8 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|518651772|ref|YP_008141292.1| - 0.0002 21.3 0.1 0.00027 20.9 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518651772|ref|YP_008141292.1| - 0.00038 20.1 0.1 0.00052 19.7 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|518651772|ref|YP_008141292.1| - 0.00063 19.6 0.0 0.00073 19.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|518651772|ref|YP_008141292.1| - 0.0096 16.0 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1634 PF07843.6 gi|518651773|ref|YP_008141293.1| - 5.5e-28 96.6 7.7 6.7e-28 96.3 5.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1634) TauE PF01925.14 gi|518651774|ref|YP_008141294.1| - 2.6e-39 135.0 28.6 2.6e-39 135.0 19.8 1.7 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE AA_permease_2 PF13520.1 gi|518651776|ref|YP_008141296.1| - 1.1e-47 162.5 65.2 1.1e-47 162.5 45.2 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518651776|ref|YP_008141296.1| - 1.5e-43 148.8 57.1 2.5e-43 148.1 39.6 1.3 1 0 0 1 1 1 1 Amino acid permease Amidinotransf PF02274.12 gi|518651777|ref|YP_008141297.1| - 1.4e-41 142.4 0.0 5.6e-41 140.4 0.0 1.8 1 1 0 1 1 1 1 Amidinotransferase Glyco_hydro_43 PF04616.9 gi|518651777|ref|YP_008141297.1| - 0.017 14.2 0.2 4.5 6.2 0.0 2.4 3 0 0 3 3 3 0 Glycosyl hydrolases family 43 OTCace PF00185.19 gi|518651778|ref|YP_008141298.1| - 9.5e-48 162.0 0.0 1.6e-47 161.3 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|518651778|ref|YP_008141298.1| - 4.6e-44 149.5 0.0 6.6e-44 149.0 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA_kinase PF00696.23 gi|518651779|ref|YP_008141299.1| - 3.3e-26 92.2 0.0 7.4e-26 91.1 0.0 1.6 1 1 0 1 1 1 1 Amino acid kinase family p450 PF00067.17 gi|518651780|ref|YP_008141300.1| - 4.5e-32 111.1 0.0 3.1e-18 65.5 0.0 3.1 3 0 0 3 3 3 3 Cytochrome P450 GtrA PF04138.9 gi|518651781|ref|YP_008141301.1| - 3.6e-19 68.8 10.5 7.2e-19 67.8 7.3 1.5 1 0 0 1 1 1 1 GtrA-like protein eIF-6 PF01912.13 gi|518651781|ref|YP_008141301.1| - 0.011 14.8 0.0 0.017 14.2 0.0 1.3 1 0 0 1 1 1 0 eIF-6 family ALAD PF00490.16 gi|518651783|ref|YP_008141303.1| - 9.7e-130 432.1 2.0 1.1e-129 432.0 1.4 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase QueC PF06508.8 gi|518651784|ref|YP_008141304.1| - 4.3e-76 254.8 0.0 8.5e-76 253.8 0.0 1.4 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|518651784|ref|YP_008141304.1| - 2.3e-05 23.9 0.0 0.00039 19.9 0.0 2.1 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.16 gi|518651784|ref|YP_008141304.1| - 0.00021 20.8 0.0 0.00028 20.4 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|518651784|ref|YP_008141304.1| - 0.0014 17.6 0.0 0.94 8.3 0.0 2.1 2 0 0 2 2 2 2 NAD synthase ATP_bind_3 PF01171.15 gi|518651784|ref|YP_008141304.1| - 0.076 12.5 0.0 0.29 10.6 0.0 1.8 2 0 0 2 2 2 0 PP-loop family 2-Hacid_dh_C PF02826.14 gi|518651785|ref|YP_008141305.1| - 1.7e-59 199.9 0.0 2.4e-59 199.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|518651785|ref|YP_008141305.1| - 3.8e-33 113.7 0.1 4.3e-33 113.5 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 gi|518651785|ref|YP_008141305.1| - 6.6e-06 26.0 0.2 1.6e-05 24.8 0.1 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|518651785|ref|YP_008141305.1| - 0.0013 19.0 0.2 0.0073 16.7 0.2 2.3 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.13 gi|518651785|ref|YP_008141305.1| - 0.0062 16.5 0.2 0.72 9.8 0.1 2.8 2 2 0 2 2 2 1 TrkA-N domain Gp_dh_N PF00044.19 gi|518651785|ref|YP_008141305.1| - 0.05 13.5 2.1 0.13 12.2 0.5 2.1 2 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IlvN PF07991.7 gi|518651785|ref|YP_008141305.1| - 0.092 12.1 0.1 0.64 9.3 0.0 2.1 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain SNARE_assoc PF09335.6 gi|518651786|ref|YP_008141306.1| - 2.1e-23 82.8 8.7 2.1e-23 82.8 6.0 2.1 1 1 1 2 2 2 2 SNARE associated Golgi protein DUF1180 PF06679.7 gi|518651786|ref|YP_008141306.1| - 0.0072 16.2 0.5 0.011 15.5 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1180) DDE_Tnp_1_2 PF13586.1 gi|518651786|ref|YP_008141306.1| - 0.099 12.8 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Transposase DDE domain CoA_binding_3 PF13727.1 gi|518651786|ref|YP_008141306.1| - 0.84 9.4 5.7 0.087 12.6 0.8 1.7 2 0 0 2 2 2 0 CoA-binding domain MFS_1 PF07690.11 gi|518651787|ref|YP_008141307.1| - 9.5e-16 57.4 42.7 2.5e-08 33.0 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily His_Phos_1 PF00300.17 gi|518651788|ref|YP_008141308.1| - 3.2e-26 92.3 0.0 4.2e-26 91.9 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Ammonium_transp PF00909.16 gi|518651789|ref|YP_008141309.1| - 7.7e-57 192.5 40.8 9.3e-57 192.2 28.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Antitoxin-MazE PF04014.13 gi|518651790|ref|YP_008141310.1| - 3.8e-11 42.4 0.2 6.5e-11 41.7 0.2 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE AbrB-like PF14250.1 gi|518651790|ref|YP_008141310.1| - 0.017 15.0 0.0 0.032 14.1 0.0 1.4 1 0 0 1 1 1 0 AbrB-like transcriptional regulator Peptidase_M56 PF05569.6 gi|518651792|ref|YP_008141312.1| - 2.7e-05 23.3 0.8 3.7e-05 22.8 0.5 1.2 1 0 0 1 1 1 1 BlaR1 peptidase M56 Peptidase_M48 PF01435.13 gi|518651792|ref|YP_008141312.1| - 3.9e-05 23.3 1.1 4.8e-05 23.0 0.4 1.5 1 1 1 2 2 2 1 Peptidase family M48 DUF2268 PF10026.4 gi|518651792|ref|YP_008141312.1| - 0.002 17.5 0.2 0.0027 17.1 0.2 1.2 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) DUF2201_N PF13203.1 gi|518651792|ref|YP_008141312.1| - 0.086 12.0 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain Tic20 PF09685.5 gi|518651792|ref|YP_008141312.1| - 1.3 9.0 7.7 2.5 8.0 3.0 2.1 2 0 0 2 2 2 0 Tic20-like protein SecG PF03840.9 gi|518651792|ref|YP_008141312.1| - 4.1 7.2 10.5 1.2 8.8 0.1 2.3 2 0 0 2 2 2 0 Preprotein translocase SecG subunit Transposase_mut PF00872.13 gi|518651793|ref|YP_008141313.1| - 8.8e-97 324.0 0.0 1e-96 323.7 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518651793|ref|YP_008141313.1| - 2.4e-16 59.6 0.0 5.7e-16 58.4 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|518651793|ref|YP_008141313.1| - 0.00017 21.3 0.2 0.00065 19.3 0.0 2.2 2 1 0 2 2 2 1 Transposase DDE_Tnp_IS66 PF03050.9 gi|518651793|ref|YP_008141313.1| - 0.001 18.3 0.0 0.0023 17.1 0.0 1.5 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.1 gi|518651793|ref|YP_008141313.1| - 0.002 18.1 0.2 0.091 12.7 0.2 2.8 1 1 0 1 1 1 1 DDE domain CKS PF01111.14 gi|518651793|ref|YP_008141313.1| - 0.066 13.0 0.1 63 3.5 0.2 3.5 3 0 0 3 3 3 0 Cyclin-dependent kinase regulatory subunit DUF4293 PF14126.1 gi|518651794|ref|YP_008141314.1| - 0.011 15.6 0.4 0.011 15.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) DUF373 PF04123.8 gi|518651794|ref|YP_008141314.1| - 0.048 12.6 0.2 0.053 12.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF3392 PF11872.3 gi|518651794|ref|YP_008141314.1| - 0.095 12.6 1.1 3 7.8 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3392) DnaJ PF00226.26 gi|518651795|ref|YP_008141315.1| - 1.2e-12 47.3 3.8 2.3e-12 46.4 2.6 1.5 1 0 0 1 1 1 1 DnaJ domain DUF4375 PF14300.1 gi|518651795|ref|YP_008141315.1| - 0.016 15.1 2.9 0.02 14.9 0.2 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4375) Beta-Casp PF10996.3 gi|518651796|ref|YP_008141316.1| - 1.8e-18 66.7 0.1 6.3e-18 64.9 0.0 1.9 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.22 gi|518651796|ref|YP_008141316.1| - 1.8e-14 53.8 0.0 4.2e-14 52.6 0.0 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|518651796|ref|YP_008141316.1| - 4.5e-12 45.5 0.1 8.9e-12 44.6 0.0 1.5 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|518651796|ref|YP_008141316.1| - 2.5e-11 43.4 0.2 6.6e-11 42.1 0.0 1.7 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|518651796|ref|YP_008141316.1| - 0.005 16.5 0.0 0.084 12.5 0.0 2.8 2 1 2 4 4 4 1 Beta-lactamase superfamily domain EcKinase PF02958.15 gi|518651796|ref|YP_008141316.1| - 0.044 12.9 1.4 0.6 9.1 0.2 2.2 2 0 0 2 2 2 0 Ecdysteroid kinase PNP_UDP_1 PF01048.15 gi|518651797|ref|YP_008141317.1| - 7.4e-45 152.7 0.0 8.3e-45 152.5 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Asn_synthase PF00733.16 gi|518651798|ref|YP_008141318.1| - 2e-24 86.5 0.0 6e-24 84.9 0.0 1.7 1 1 0 1 1 1 1 Asparagine synthase CTP_transf_2 PF01467.21 gi|518651800|ref|YP_008141320.1| - 1.2e-15 57.9 0.0 1.4e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|518651800|ref|YP_008141320.1| - 0.019 14.6 0.9 0.081 12.5 0.6 2.1 1 1 0 1 1 1 0 FAD synthetase Prefoldin_2 PF01920.15 gi|518651801|ref|YP_008141321.1| - 4.6e-23 81.0 19.6 5.3e-23 80.8 13.6 1.0 1 0 0 1 1 1 1 Prefoldin subunit ADIP PF11559.3 gi|518651801|ref|YP_008141321.1| - 0.00024 21.0 18.0 0.0017 18.2 6.6 2.0 2 0 0 2 2 2 2 Afadin- and alpha -actinin-Binding Med4 PF10018.4 gi|518651801|ref|YP_008141321.1| - 0.0011 18.3 12.1 0.0082 15.5 0.3 2.1 2 0 0 2 2 2 1 Vitamin-D-receptor interacting Mediator subunit 4 COG5 PF10392.4 gi|518651801|ref|YP_008141321.1| - 0.0024 17.8 2.9 0.0024 17.8 2.0 2.0 2 0 0 2 2 2 1 Golgi transport complex subunit 5 Troponin PF00992.15 gi|518651801|ref|YP_008141321.1| - 0.017 15.2 0.5 0.017 15.2 0.4 2.1 2 0 0 2 2 2 0 Troponin Rab5-bind PF09311.6 gi|518651801|ref|YP_008141321.1| - 0.024 14.5 16.2 0.097 12.5 0.6 2.0 2 0 0 2 2 2 0 Rabaptin-like protein DUF3584 PF12128.3 gi|518651801|ref|YP_008141321.1| - 0.027 11.8 13.2 0.042 11.1 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4527 PF15030.1 gi|518651801|ref|YP_008141321.1| - 0.032 13.5 4.8 0.04 13.2 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4527) Laminin_II PF06009.7 gi|518651801|ref|YP_008141321.1| - 0.039 13.7 12.3 0.4 10.4 1.7 2.1 1 1 1 2 2 2 0 Laminin Domain II DUF3585 PF12130.3 gi|518651801|ref|YP_008141321.1| - 0.04 13.7 14.8 1.2 8.9 0.6 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF3585) BLOC1_2 PF10046.4 gi|518651801|ref|YP_008141321.1| - 0.052 13.6 17.6 0.84 9.8 2.7 2.5 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin-6_N PF09177.6 gi|518651801|ref|YP_008141321.1| - 0.053 13.9 6.8 0.57 10.6 1.0 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal DUF3646 PF12362.3 gi|518651801|ref|YP_008141321.1| - 0.086 12.7 2.6 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 DNA polymerase III gamma and tau subunits C terminal Reo_sigmaC PF04582.7 gi|518651801|ref|YP_008141321.1| - 0.089 11.9 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein Prefoldin PF02996.12 gi|518651801|ref|YP_008141321.1| - 0.11 12.1 16.5 0.69 9.5 0.4 2.6 2 1 0 2 2 2 0 Prefoldin subunit Collagen_bind PF05737.7 gi|518651801|ref|YP_008141321.1| - 0.12 12.5 4.0 0.24 11.5 2.8 1.7 1 1 0 1 1 1 0 Collagen binding domain FH2 PF02181.18 gi|518651801|ref|YP_008141321.1| - 0.14 10.9 10.8 0.8 8.5 7.5 1.9 1 1 0 1 1 1 0 Formin Homology 2 Domain DUF4164 PF13747.1 gi|518651801|ref|YP_008141321.1| - 0.15 12.2 9.2 0.82 9.8 0.8 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) PSDC PF12588.3 gi|518651801|ref|YP_008141321.1| - 0.17 11.4 3.3 0.074 12.6 0.4 1.7 1 1 1 2 2 2 0 Phophatidylserine decarboxylase Mnd1 PF03962.10 gi|518651801|ref|YP_008141321.1| - 0.2 11.3 11.9 0.31 10.6 8.3 1.3 1 0 0 1 1 1 0 Mnd1 family ARGLU PF15346.1 gi|518651801|ref|YP_008141321.1| - 0.27 10.9 17.7 0.053 13.3 7.5 2.0 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 FliD_C PF07195.7 gi|518651801|ref|YP_008141321.1| - 0.3 10.3 12.3 0.87 8.8 2.4 2.1 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus UBN2 PF14223.1 gi|518651801|ref|YP_008141321.1| - 0.3 10.8 8.5 0.21 11.4 4.6 1.6 1 1 1 2 2 2 0 gag-polypeptide of LTR copia-type DUF2951 PF11166.3 gi|518651801|ref|YP_008141321.1| - 0.36 10.7 11.0 3 7.7 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) Nsp1_C PF05064.8 gi|518651801|ref|YP_008141321.1| - 0.37 10.4 15.9 0.24 11.0 4.7 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region V_ATPase_I PF01496.14 gi|518651801|ref|YP_008141321.1| - 0.59 7.9 10.0 0.78 7.5 6.9 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NTR2 PF15458.1 gi|518651801|ref|YP_008141321.1| - 0.66 9.1 19.2 1.2 8.3 5.8 2.1 2 0 0 2 2 2 0 Nineteen complex-related protein 2 DUF972 PF06156.8 gi|518651801|ref|YP_008141321.1| - 0.76 10.1 16.3 0.47 10.8 1.8 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF972) HDV_ag PF01517.13 gi|518651801|ref|YP_008141321.1| - 0.9 9.1 8.5 0.59 9.7 0.1 2.0 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen Spc7 PF08317.6 gi|518651801|ref|YP_008141321.1| - 0.99 8.0 14.0 2 6.9 1.1 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.4 gi|518651801|ref|YP_008141321.1| - 1.1 9.1 17.0 2.9 7.7 11.8 1.6 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spt5_N PF11942.3 gi|518651801|ref|YP_008141321.1| - 1.1 9.9 13.7 0.26 11.9 4.9 2.1 2 0 0 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal Tropomyosin PF00261.15 gi|518651801|ref|YP_008141321.1| - 1.1 8.2 17.6 5.5 6.0 12.2 1.8 1 1 0 1 1 1 0 Tropomyosin TBPIP PF07106.8 gi|518651801|ref|YP_008141321.1| - 1.3 8.5 19.1 0.53 9.8 1.5 2.0 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) IFT57 PF10498.4 gi|518651801|ref|YP_008141321.1| - 1.5 7.5 17.7 4 6.0 12.3 1.6 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 Fib_alpha PF08702.5 gi|518651801|ref|YP_008141321.1| - 1.5 8.9 15.8 1.6 8.8 10.4 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Agouti PF05039.7 gi|518651801|ref|YP_008141321.1| - 1.7 9.0 6.9 0.55 10.6 1.8 1.9 2 0 0 2 2 2 0 Agouti protein Fzo_mitofusin PF04799.8 gi|518651801|ref|YP_008141321.1| - 2.2 7.6 11.5 0.44 9.9 0.7 2.1 1 1 1 2 2 2 0 fzo-like conserved region GP41 PF00517.12 gi|518651801|ref|YP_008141321.1| - 2.3 7.7 12.9 2.3 7.7 2.2 2.1 2 0 0 2 2 2 0 Retroviral envelope protein DUF3450 PF11932.3 gi|518651801|ref|YP_008141321.1| - 2.4 7.3 16.8 0.26 10.5 1.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF464 PF04327.7 gi|518651801|ref|YP_008141321.1| - 2.5 8.4 7.5 0.93 9.7 1.1 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF464) Coat_F PF07875.7 gi|518651801|ref|YP_008141321.1| - 2.9 8.1 9.4 0.24 11.5 2.7 2.0 2 1 1 3 3 1 0 Coat F domain Jnk-SapK_ap_N PF09744.4 gi|518651801|ref|YP_008141321.1| - 3.3 7.6 15.9 5.2 7.0 5.0 2.1 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 DUF2743 PF10899.3 gi|518651801|ref|YP_008141321.1| - 3.8 6.8 7.5 17 4.7 5.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2743) Spc24 PF08286.6 gi|518651801|ref|YP_008141321.1| - 5 6.8 21.0 3.9 7.1 3.0 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 SPAM PF02090.10 gi|518651801|ref|YP_008141321.1| - 5.2 7.0 13.6 0.84 9.6 0.8 2.1 2 0 0 2 2 2 0 Salmonella surface presentation of antigen gene type M protein Cauli_AT PF03233.8 gi|518651801|ref|YP_008141321.1| - 5.6 6.6 14.3 3.5 7.3 1.8 2.1 1 1 1 2 2 2 0 Aphid transmission protein T2SM PF04612.7 gi|518651801|ref|YP_008141321.1| - 6.4 6.5 8.2 13 5.5 0.4 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M Syntaxin PF00804.20 gi|518651801|ref|YP_008141321.1| - 6.9 6.8 12.9 20 5.4 9.0 1.8 1 1 0 1 1 1 0 Syntaxin FlaC_arch PF05377.6 gi|518651801|ref|YP_008141321.1| - 7 6.6 13.1 7.1 6.6 1.3 3.2 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4140 PF13600.1 gi|518651801|ref|YP_008141321.1| - 7.8 6.9 8.5 5.7 7.4 1.2 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) SlyX PF04102.7 gi|518651801|ref|YP_008141321.1| - 7.9 6.9 20.1 11 6.4 3.2 3.1 2 1 1 3 3 3 0 SlyX Snapin_Pallidin PF14712.1 gi|518651801|ref|YP_008141321.1| - 8.1 6.8 15.6 0.57 10.5 4.0 2.3 1 1 1 2 2 2 0 Snapin/Pallidin MerR-DNA-bind PF09278.6 gi|518651801|ref|YP_008141321.1| - 9.6 6.6 14.2 20 5.6 2.1 2.7 2 1 0 2 2 2 0 MerR, DNA binding Pcc1 PF09341.5 gi|518651802|ref|YP_008141322.1| - 2.6e-08 33.7 0.2 2.8e-08 33.6 0.1 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 7TM-7TMR_HD PF07698.6 gi|518651804|ref|YP_008141324.1| - 0.00061 19.2 14.8 0.0013 18.2 6.3 2.1 2 0 0 2 2 2 2 7TM receptor with intracellular HD hydrolase DUF1453 PF07301.6 gi|518651804|ref|YP_008141324.1| - 0.0015 18.3 11.5 0.0022 17.8 8.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1453) GtrA PF04138.9 gi|518651804|ref|YP_008141324.1| - 0.0066 16.3 7.5 0.0066 16.3 5.2 1.8 2 0 0 2 2 2 1 GtrA-like protein CcmD PF04995.9 gi|518651804|ref|YP_008141324.1| - 0.01 15.5 0.4 0.5 10.1 0.2 2.5 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) HhH-GPD PF00730.20 gi|518651805|ref|YP_008141325.1| - 2.2e-17 63.2 0.0 2.9e-17 62.9 0.0 1.1 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.1 gi|518651805|ref|YP_008141325.1| - 0.0005 20.1 0.0 0.0023 18.0 0.0 2.1 2 1 0 2 2 2 1 Helix-hairpin-helix domain DUF3647 PF12363.3 gi|518651805|ref|YP_008141325.1| - 0.027 14.5 2.5 0.91 9.6 0.1 2.5 2 1 0 2 2 2 0 Phage protein AAA_5 PF07728.9 gi|518651805|ref|YP_008141325.1| - 0.051 13.2 0.0 0.2 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF3899 PF13038.1 gi|518651805|ref|YP_008141325.1| - 0.26 11.4 2.7 5.7 7.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) Cas_Cas4 PF01930.12 gi|518651805|ref|YP_008141325.1| - 0.76 9.6 4.2 7.3 6.4 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF83 MarC PF01914.12 gi|518651806|ref|YP_008141326.1| - 5.2e-46 156.3 17.8 6e-46 156.1 12.3 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein LysE PF01810.13 gi|518651806|ref|YP_008141326.1| - 0.00065 19.0 13.2 0.004 16.4 9.2 1.9 1 1 0 1 1 1 1 LysE type translocator TauE PF01925.14 gi|518651806|ref|YP_008141326.1| - 0.0057 16.1 5.6 0.0057 16.1 3.9 2.1 1 1 1 2 2 2 1 Sulfite exporter TauE/SafE DUF3927 PF13064.1 gi|518651806|ref|YP_008141326.1| - 0.095 12.1 4.8 0.84 9.1 1.5 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) Epimerase PF01370.16 gi|518651807|ref|YP_008141327.1| - 2e-24 86.3 0.0 3.2e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|518651807|ref|YP_008141327.1| - 0.00013 21.0 0.1 0.0021 16.9 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|518651807|ref|YP_008141327.1| - 0.041 13.8 0.0 2.5 8.0 0.0 2.2 1 1 0 1 1 1 0 NADH(P)-binding NTP_transferase PF00483.18 gi|518651808|ref|YP_008141328.1| - 1.5e-17 63.7 0.0 1.9e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Glycos_transf_2 PF00535.21 gi|518651808|ref|YP_008141328.1| - 0.00073 19.2 0.0 0.0011 18.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 NTP_transf_3 PF12804.2 gi|518651808|ref|YP_008141328.1| - 0.0033 17.5 0.0 0.0037 17.3 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain ATP_bind_3 PF01171.15 gi|518651809|ref|YP_008141329.1| - 6.1e-12 45.4 0.0 9.3e-12 44.8 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|518651809|ref|YP_008141329.1| - 4.6e-08 32.0 0.0 6.9e-08 31.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|518651809|ref|YP_008141329.1| - 4.1e-05 23.2 0.0 6.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|518651809|ref|YP_008141329.1| - 0.00024 20.0 0.0 0.00037 19.4 0.0 1.3 1 0 0 1 1 1 1 NAD synthase RecR PF02132.10 gi|518651809|ref|YP_008141329.1| - 0.0015 17.8 1.7 0.0015 17.8 1.2 3.1 3 0 0 3 3 3 1 RecR protein QueC PF06508.8 gi|518651809|ref|YP_008141329.1| - 0.0047 16.2 0.1 0.013 14.7 0.0 1.9 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.14 gi|518651809|ref|YP_008141329.1| - 0.0057 16.4 0.0 0.016 15.0 0.0 1.8 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family zf-HYPF PF07503.7 gi|518651809|ref|YP_008141329.1| - 0.31 10.4 0.1 0.31 10.4 0.1 3.0 4 0 0 4 4 4 0 HypF finger DZR PF12773.2 gi|518651809|ref|YP_008141329.1| - 3.8 7.3 7.0 8.7 6.2 0.4 3.0 3 0 0 3 3 3 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518651810|ref|YP_008141330.1| - 0.035 13.3 0.5 0.095 11.9 0.3 1.8 1 1 0 1 1 1 0 zinc-ribbon domain DUF4149 PF13664.1 gi|518651812|ref|YP_008141332.1| - 0.058 13.4 7.5 0.047 13.7 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) DUF1129 PF06570.6 gi|518651812|ref|YP_008141332.1| - 8.4 5.6 8.1 0.98 8.6 2.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) E1-E2_ATPase PF00122.15 gi|518651813|ref|YP_008141333.1| - 1.6e-57 194.1 2.0 1.6e-57 194.1 1.4 2.9 2 2 1 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|518651813|ref|YP_008141333.1| - 1.6e-30 107.1 1.2 3.5e-30 106.0 0.8 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.16 gi|518651813|ref|YP_008141333.1| - 2.5e-28 98.8 8.4 2.5e-28 98.8 5.8 2.5 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.21 gi|518651813|ref|YP_008141333.1| - 2.7e-18 65.2 1.1 9.1e-18 63.4 0.0 2.4 1 1 1 2 2 2 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|518651813|ref|YP_008141333.1| - 4.9e-17 62.7 0.0 9e-17 61.8 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|518651813|ref|YP_008141333.1| - 3.8e-11 42.7 0.0 2.2e-10 40.3 0.0 2.2 2 0 0 2 2 2 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Hydrolase_3 PF08282.7 gi|518651813|ref|YP_008141333.1| - 6.7e-07 29.1 3.1 2.1e-05 24.2 0.5 2.5 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase ParG PF09274.5 gi|518651815|ref|YP_008141335.1| - 0.005 16.7 0.3 0.0061 16.4 0.2 1.1 1 0 0 1 1 1 1 ParG Condensation PF00668.15 gi|518651815|ref|YP_008141335.1| - 0.055 12.3 0.0 0.062 12.1 0.0 1.0 1 0 0 1 1 1 0 Condensation domain DUF4415 PF14384.1 gi|518651815|ref|YP_008141335.1| - 0.072 13.2 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4415) N6_N4_Mtase PF01555.13 gi|518651816|ref|YP_008141336.1| - 1.1e-27 97.0 5.0 5.5e-17 62.0 0.0 2.1 2 0 0 2 2 2 2 DNA methylase Methyltransf_26 PF13659.1 gi|518651816|ref|YP_008141336.1| - 1e-12 48.0 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|518651816|ref|YP_008141336.1| - 1.8e-11 43.9 0.1 5e-11 42.5 0.1 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|518651816|ref|YP_008141336.1| - 3.4e-06 26.7 0.3 6.2e-06 25.8 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518651816|ref|YP_008141336.1| - 1.7e-05 25.2 0.0 0.0011 19.4 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.11 gi|518651816|ref|YP_008141336.1| - 0.00042 19.4 0.1 0.00084 18.5 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase Cons_hypoth95 PF03602.10 gi|518651816|ref|YP_008141336.1| - 0.0035 16.7 0.0 0.01 15.2 0.0 1.7 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|518651816|ref|YP_008141336.1| - 0.0037 16.8 0.0 0.0064 16.0 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.11 gi|518651816|ref|YP_008141336.1| - 0.042 13.4 0.3 0.37 10.3 0.0 2.1 1 1 1 2 2 2 0 Met-10+ like-protein MethyltransfD12 PF02086.10 gi|518651817|ref|YP_008141337.1| - 3.1e-53 180.8 24.2 3.9e-53 180.5 16.8 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_26 PF13659.1 gi|518651817|ref|YP_008141337.1| - 0.012 15.6 0.0 0.023 14.7 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|518651817|ref|YP_008141337.1| - 0.022 14.1 0.3 0.048 13.0 0.1 1.8 2 0 0 2 2 2 0 Conserved hypothetical protein 95 OrfB_Zn_ribbon PF07282.6 gi|518651818|ref|YP_008141338.1| - 1e-22 79.5 0.1 1.7e-22 78.8 0.1 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518651818|ref|YP_008141338.1| - 2.1e-11 43.6 0.1 3.3e-11 43.0 0.1 1.3 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.7 gi|518651818|ref|YP_008141338.1| - 0.084 12.2 0.3 0.16 11.3 0.2 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding DUF2231 PF09990.4 gi|518651819|ref|YP_008141339.1| - 0.099 12.9 0.5 0.11 12.8 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) PemK PF02452.12 gi|518651820|ref|YP_008141340.1| - 3.2e-10 40.2 0.0 3.4e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 PemK-like protein Adeno_hexon_C PF03678.9 gi|518651821|ref|YP_008141341.1| - 0.032 13.6 0.2 0.041 13.3 0.2 1.2 1 0 0 1 1 1 0 Hexon, adenovirus major coat protein, C-terminal domain TTL PF03133.10 gi|518651822|ref|YP_008141342.1| - 0.13 11.1 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family Nitro_FeMo-Co PF02579.12 gi|518651823|ref|YP_008141343.1| - 3e-09 36.8 0.1 4e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor zf-ribbon_3 PF13248.1 gi|518651824|ref|YP_008141344.1| - 8.7e-09 34.3 2.1 1.5e-08 33.5 1.5 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|518651824|ref|YP_008141344.1| - 3.8e-07 29.3 2.7 8.7e-07 28.2 1.8 1.7 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|518651824|ref|YP_008141344.1| - 2.7e-06 27.0 1.3 2.7e-06 27.0 0.9 1.5 2 0 0 2 2 1 1 Double zinc ribbon UPF0547 PF10571.4 gi|518651824|ref|YP_008141344.1| - 6.3e-05 22.5 5.9 0.021 14.4 1.0 2.3 1 1 1 2 2 2 2 Uncharacterised protein family UPF0547 Prok-RING_1 PF14446.1 gi|518651824|ref|YP_008141344.1| - 0.00045 19.8 0.3 0.00076 19.1 0.2 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 OrfB_Zn_ribbon PF07282.6 gi|518651824|ref|YP_008141344.1| - 0.0073 15.9 0.3 0.02 14.5 0.2 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518651824|ref|YP_008141344.1| - 0.011 15.0 1.3 0.028 13.7 0.9 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding zf-NADH-PPase PF09297.6 gi|518651824|ref|YP_008141344.1| - 0.02 14.4 0.8 4 7.0 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.1 gi|518651824|ref|YP_008141344.1| - 0.026 14.2 1.5 4.2 7.1 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal Auto_anti-p27 PF06677.7 gi|518651824|ref|YP_008141344.1| - 0.035 13.8 2.5 0.035 13.8 1.8 2.1 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) GRAM PF02893.15 gi|518651824|ref|YP_008141344.1| - 0.04 13.4 0.1 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 GRAM domain DUF164 PF02591.10 gi|518651824|ref|YP_008141344.1| - 0.049 13.4 0.9 7.3 6.5 0.1 2.5 2 0 0 2 2 2 0 Putative zinc ribbon domain DUF1610 PF07754.6 gi|518651824|ref|YP_008141344.1| - 0.12 12.5 6.3 3.6 7.7 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zinc_ribbon_5 PF13719.1 gi|518651824|ref|YP_008141344.1| - 0.17 11.5 1.0 9.6 5.8 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518651824|ref|YP_008141344.1| - 0.18 11.4 1.0 11 5.8 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.18 gi|518651824|ref|YP_008141344.1| - 0.22 11.7 1.1 0.4 10.9 0.3 1.8 2 0 0 2 2 1 0 Ribosomal L32p protein family DNA_RNApol_7kD PF03604.8 gi|518651824|ref|YP_008141344.1| - 0.37 10.2 5.8 4.4 6.8 1.7 2.8 2 1 1 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit Cript PF10235.4 gi|518651824|ref|YP_008141344.1| - 0.46 10.8 3.1 1.6 9.1 2.2 2.1 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT Zn_ribbon_recom PF13408.1 gi|518651824|ref|YP_008141344.1| - 0.55 10.5 4.9 2.5 8.4 0.3 2.6 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain zf-H2C2_2 PF13465.1 gi|518651824|ref|YP_008141344.1| - 0.8 10.1 6.1 7.6 7.0 0.5 2.5 1 1 1 2 2 2 0 Zinc-finger double domain zf-ISL3 PF14690.1 gi|518651824|ref|YP_008141344.1| - 2.5 8.1 8.9 3 7.9 1.2 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Rubredoxin PF00301.15 gi|518651824|ref|YP_008141344.1| - 2.8 7.8 5.7 6.1 6.8 0.3 2.4 1 1 1 2 2 2 0 Rubredoxin Zn_Tnp_IS1595 PF12760.2 gi|518651824|ref|YP_008141344.1| - 6.6 6.6 6.7 17 5.3 1.1 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Urocanase PF01175.13 gi|518651825|ref|YP_008141345.1| - 5.9e-255 846.4 0.0 6.7e-255 846.2 0.0 1.0 1 0 0 1 1 1 1 Urocanase Sugar_tr PF00083.19 gi|518651826|ref|YP_008141346.1| - 9.6e-41 139.7 43.2 9.9e-32 110.0 9.5 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.11 gi|518651826|ref|YP_008141346.1| - 6.1e-37 127.1 48.9 9.5e-28 96.9 13.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily ATG22 PF11700.3 gi|518651826|ref|YP_008141346.1| - 6.8e-05 21.5 26.4 0.00024 19.7 11.2 3.2 3 0 0 3 3 3 2 Vacuole effluxer Atg22 like MFS_2 PF13347.1 gi|518651826|ref|YP_008141346.1| - 7.5e-05 21.2 44.9 8.1e-05 21.1 5.5 3.0 1 1 2 3 3 3 2 MFS/sugar transport protein MFS_3 PF05977.8 gi|518651826|ref|YP_008141346.1| - 4.8 5.1 14.3 0.031 12.4 1.4 2.5 2 1 0 2 2 2 0 Transmembrane secretion effector DUF3981 PF13139.1 gi|518651826|ref|YP_008141346.1| - 9.8 6.2 25.3 4.6 7.2 4.7 3.6 3 1 0 3 3 3 0 Domain of unknown function (DUF3981) DAO PF01266.19 gi|518651827|ref|YP_008141347.1| - 5.7e-44 150.4 0.0 6.7e-44 150.2 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|518651827|ref|YP_008141347.1| - 9.7e-07 28.7 0.2 3.7e-06 26.8 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|518651827|ref|YP_008141347.1| - 0.00058 19.7 0.1 0.0098 15.7 0.1 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|518651827|ref|YP_008141347.1| - 0.0012 18.0 0.0 0.0082 15.2 0.0 1.9 1 1 0 1 1 1 1 FAD binding domain 3HCDH_N PF02737.13 gi|518651827|ref|YP_008141347.1| - 0.0018 17.9 0.0 0.0091 15.6 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|518651827|ref|YP_008141347.1| - 0.0027 17.1 0.1 0.0076 15.7 0.0 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|518651827|ref|YP_008141347.1| - 0.0089 15.8 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase HI0933_like PF03486.9 gi|518651827|ref|YP_008141347.1| - 0.012 14.1 0.1 0.03 12.7 0.0 1.7 2 0 0 2 2 2 0 HI0933-like protein FAD_binding_2 PF00890.19 gi|518651827|ref|YP_008141347.1| - 0.02 13.7 0.0 0.039 12.8 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.17 gi|518651827|ref|YP_008141347.1| - 0.021 13.6 1.1 0.2 10.4 0.0 2.8 3 1 1 4 4 4 0 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.9 gi|518651827|ref|YP_008141347.1| - 0.048 13.0 0.2 0.13 11.6 0.0 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.22 gi|518651827|ref|YP_008141347.1| - 0.057 13.8 0.1 0.5 10.7 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase COXG PF06240.8 gi|518651828|ref|YP_008141348.1| - 5.4e-31 107.1 0.1 6e-31 106.9 0.1 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) DUF3211 PF11485.3 gi|518651828|ref|YP_008141348.1| - 0.024 14.6 0.2 0.027 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3211) RimK PF08443.6 gi|518651829|ref|YP_008141349.1| - 5.2e-42 143.4 0.0 7.1e-42 143.0 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 gi|518651829|ref|YP_008141349.1| - 6.5e-10 39.0 0.0 9.8e-10 38.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|518651829|ref|YP_008141349.1| - 1.1e-08 35.0 0.0 2.7e-08 33.8 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.11 gi|518651829|ref|YP_008141349.1| - 3.9e-07 29.3 0.0 5.7e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain CPSase_L_D2 PF02786.12 gi|518651829|ref|YP_008141349.1| - 1.2e-06 28.0 0.0 2.7e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.1 gi|518651829|ref|YP_008141349.1| - 0.0004 19.2 0.0 0.0021 16.8 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_5 PF13549.1 gi|518651829|ref|YP_008141349.1| - 0.0016 17.7 0.0 0.0036 16.5 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain MlrC_C PF07171.7 gi|518651829|ref|YP_008141349.1| - 0.013 15.0 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus ATPgrasp_YheCD PF14398.1 gi|518651829|ref|YP_008141349.1| - 0.015 14.1 0.0 0.23 10.2 0.0 2.2 2 0 0 2 2 2 0 YheC/D like ATP-grasp ATP-grasp PF02222.17 gi|518651829|ref|YP_008141349.1| - 0.028 13.7 0.0 0.14 11.4 0.0 2.0 1 1 0 1 1 1 0 ATP-grasp domain Aminotran_1_2 PF00155.16 gi|518651830|ref|YP_008141350.1| - 8.3e-44 150.0 0.0 1e-43 149.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.8 gi|518651830|ref|YP_008141350.1| - 4.1e-07 28.9 0.0 4.9e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Allinase Peripla_BP_6 PF13458.1 gi|518651830|ref|YP_008141350.1| - 0.012 15.0 0.0 0.034 13.4 0.0 1.6 2 0 0 2 2 2 0 Periplasmic binding protein GTP_EFTU PF00009.22 gi|518651830|ref|YP_008141350.1| - 0.057 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Cys_Met_Meta_PP PF01053.15 gi|518651830|ref|YP_008141350.1| - 0.13 10.5 0.0 0.16 10.2 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme FTCD_N PF07837.7 gi|518651831|ref|YP_008141351.1| - 3.2e-61 205.9 0.0 4.8e-61 205.3 0.0 1.3 1 0 0 1 1 1 1 Formiminotransferase domain, N-terminal subdomain FTCD PF02971.9 gi|518651831|ref|YP_008141351.1| - 8.6e-22 77.3 0.1 3.1e-21 75.5 0.0 1.8 2 0 0 2 2 2 1 Formiminotransferase domain FlgM PF04316.8 gi|518651831|ref|YP_008141351.1| - 0.087 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM DDE_5 PF13546.1 gi|518651834|ref|YP_008141354.1| - 2.1e-12 46.5 0.0 3.2e-10 39.3 0.0 2.2 1 1 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_2 PF04693.7 gi|518651834|ref|YP_008141354.1| - 1.7e-11 43.7 0.8 2.9e-11 42.9 0.6 1.3 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.16 gi|518651834|ref|YP_008141354.1| - 5.5e-11 42.4 0.4 8.1e-11 41.8 0.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain NAD_binding_10 PF13460.1 gi|518651835|ref|YP_008141355.1| - 8e-15 55.3 0.0 9.6e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 gi|518651835|ref|YP_008141355.1| - 4e-13 49.1 0.1 6.9e-09 35.3 0.0 2.1 2 0 0 2 2 2 2 NmrA-like family Epimerase PF01370.16 gi|518651835|ref|YP_008141355.1| - 1.3e-12 47.7 0.0 1.9e-12 47.1 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518651835|ref|YP_008141355.1| - 1.2e-05 24.3 0.0 0.011 14.6 0.0 2.8 1 1 1 2 2 2 2 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|518651835|ref|YP_008141355.1| - 0.00016 20.4 0.1 0.0099 14.6 0.0 2.2 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Glyco_hydro_17 PF00332.13 gi|518651835|ref|YP_008141355.1| - 0.0022 17.1 0.1 0.0032 16.5 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 17 TrkA_N PF02254.13 gi|518651835|ref|YP_008141355.1| - 0.028 14.4 0.1 0.056 13.4 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain Polysacc_synt_2 PF02719.10 gi|518651835|ref|YP_008141355.1| - 0.13 11.0 0.0 0.27 10.0 0.0 1.5 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein TetR_N PF00440.18 gi|518651836|ref|YP_008141356.1| - 2.2e-15 55.9 0.0 3.6e-15 55.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family CENP-B_N PF04218.8 gi|518651836|ref|YP_008141356.1| - 0.031 13.7 0.0 0.062 12.7 0.0 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_26 PF13443.1 gi|518651836|ref|YP_008141356.1| - 0.11 12.7 0.1 0.99 9.6 0.0 2.4 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain TetR_C_6 PF13977.1 gi|518651836|ref|YP_008141356.1| - 0.13 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional repressor HTH_Tnp_IS1 PF12759.2 gi|518651836|ref|YP_008141356.1| - 0.14 11.6 0.4 0.52 9.7 0.2 2.0 1 1 0 1 1 1 0 InsA C-terminal domain Vma12 PF11712.3 gi|518651837|ref|YP_008141357.1| - 0.1 12.2 1.8 0.14 11.8 1.3 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Caa3_CtaG PF09678.5 gi|518651837|ref|YP_008141357.1| - 0.52 9.2 8.4 0.079 11.8 2.8 1.7 1 1 1 2 2 2 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DUF1129 PF06570.6 gi|518651837|ref|YP_008141357.1| - 0.52 9.5 7.4 0.73 9.0 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF4131 PF13567.1 gi|518651837|ref|YP_008141357.1| - 1.8 7.9 6.6 6.6 6.1 4.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1980 PF09323.5 gi|518651837|ref|YP_008141357.1| - 4.1 7.1 15.7 2.7 7.7 5.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DUF3139 PF11337.3 gi|518651838|ref|YP_008141358.1| - 0.0026 18.0 1.0 0.0098 16.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3139) DEDD_Tnp_IS110 PF01548.12 gi|518651839|ref|YP_008141359.1| - 1.5e-25 89.4 0.0 2.6e-25 88.7 0.0 1.4 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.11 gi|518651839|ref|YP_008141359.1| - 2.4e-24 85.2 0.0 5.2e-24 84.1 0.0 1.6 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family rve PF00665.21 gi|518651840|ref|YP_008141360.1| - 1.1e-22 80.4 0.0 4.1e-22 78.5 0.0 1.8 2 0 0 2 2 2 1 Integrase core domain rve_3 PF13683.1 gi|518651840|ref|YP_008141360.1| - 6.5e-05 22.3 6.5 0.00029 20.3 1.5 3.0 2 1 0 2 2 2 1 Integrase core domain HTH_29 PF13551.1 gi|518651840|ref|YP_008141360.1| - 0.00039 20.5 0.0 0.00072 19.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|518651840|ref|YP_008141360.1| - 0.00096 19.9 0.0 0.0021 18.8 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_21 PF13276.1 gi|518651840|ref|YP_008141360.1| - 0.02 14.9 0.0 0.041 13.9 0.0 1.5 1 0 0 1 1 1 0 HTH-like domain HTH_28 PF13518.1 gi|518651840|ref|YP_008141360.1| - 0.024 14.6 0.4 0.024 14.6 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|518651840|ref|YP_008141360.1| - 0.044 13.4 0.1 0.48 10.1 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain AAA_14 PF13173.1 gi|518651841|ref|YP_008141361.1| - 2.6e-38 130.7 1.7 2.6e-38 130.7 1.2 2.1 2 1 1 3 3 3 1 AAA domain Arch_ATPase PF01637.13 gi|518651841|ref|YP_008141361.1| - 8.1e-09 35.5 3.0 0.00013 21.7 0.1 2.7 1 1 1 2 2 2 2 Archaeal ATPase DUF4143 PF13635.1 gi|518651841|ref|YP_008141361.1| - 1.5e-08 34.6 1.3 2.2e-08 34.1 0.7 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_22 PF13401.1 gi|518651841|ref|YP_008141361.1| - 0.00079 19.5 0.0 0.026 14.6 0.0 2.5 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|518651841|ref|YP_008141361.1| - 0.0039 16.1 0.0 0.0086 15.0 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein RNA_helicase PF00910.17 gi|518651841|ref|YP_008141361.1| - 0.0068 16.5 0.5 0.045 13.9 0.0 2.7 2 1 0 2 2 2 1 RNA helicase AAA PF00004.24 gi|518651841|ref|YP_008141361.1| - 0.011 15.9 0.0 0.026 14.7 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FtsK_SpoIIIE PF01580.13 gi|518651841|ref|YP_008141361.1| - 0.014 14.9 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_25 PF13481.1 gi|518651841|ref|YP_008141361.1| - 0.06 12.7 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|518651841|ref|YP_008141361.1| - 0.083 12.6 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Part of AAA domain Lyase_aromatic PF00221.14 gi|518651842|ref|YP_008141362.1| - 3.9e-177 589.4 0.0 4.5e-177 589.2 0.0 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase Amidohydro_4 PF13147.1 gi|518651843|ref|YP_008141363.1| - 2.8e-12 47.2 0.0 5.4e-08 33.1 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|518651843|ref|YP_008141363.1| - 2.6e-09 37.1 0.0 8.6e-07 28.9 0.0 2.4 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_5 PF13594.1 gi|518651843|ref|YP_008141363.1| - 2.2e-05 24.2 0.1 4.4e-05 23.2 0.1 1.5 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|518651843|ref|YP_008141363.1| - 4.7e-05 22.7 0.0 0.024 13.8 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|518651844|ref|YP_008141364.1| - 7.5e-23 81.9 0.0 1.7e-22 80.7 0.0 1.6 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|518651844|ref|YP_008141364.1| - 6.5e-16 58.9 0.0 1.3e-14 54.6 0.0 2.5 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|518651844|ref|YP_008141364.1| - 1.8e-12 46.8 1.7 6.9e-12 45.0 1.0 2.2 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|518651844|ref|YP_008141364.1| - 8.3e-08 31.8 0.0 0.018 14.2 0.0 3.1 3 0 0 3 3 3 2 Amidohydrolase family Peptidase_M20 PF01546.23 gi|518651845|ref|YP_008141365.1| - 2.8e-25 88.9 0.2 3.8e-25 88.4 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|518651845|ref|YP_008141365.1| - 3.9e-09 36.4 0.0 6.2e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 M20_dimer PF07687.9 gi|518651845|ref|YP_008141365.1| - 7.2e-07 28.9 0.0 1.5e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain DUF998 PF06197.8 gi|518651846|ref|YP_008141366.1| - 1.1e-28 99.8 15.3 1.3e-28 99.5 10.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DUF1980 PF09323.5 gi|518651846|ref|YP_008141366.1| - 0.0026 17.5 1.0 0.0026 17.5 0.7 2.1 2 1 0 2 2 2 1 Domain of unknown function (DUF1980) YfhO PF09586.5 gi|518651846|ref|YP_008141366.1| - 0.031 12.3 12.6 0.033 12.2 8.7 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Bax1-I PF01027.15 gi|518651846|ref|YP_008141366.1| - 0.059 12.9 18.0 0.085 12.4 12.4 1.3 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF872 PF05915.7 gi|518651846|ref|YP_008141366.1| - 0.15 11.9 5.6 0.08 12.8 0.8 2.2 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF3488 PF11992.3 gi|518651846|ref|YP_008141366.1| - 0.57 8.7 3.0 0.94 8.0 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF2069 PF09842.4 gi|518651846|ref|YP_008141366.1| - 1.9 8.4 8.9 0.73 9.8 2.9 2.3 2 1 1 3 3 3 0 Predicted membrane protein (DUF2069) DUF2157 PF09925.4 gi|518651846|ref|YP_008141366.1| - 3.3 7.2 14.8 0.21 11.1 3.6 2.8 3 0 0 3 3 3 0 Predicted membrane protein (DUF2157) DUF4131 PF13567.1 gi|518651846|ref|YP_008141366.1| - 6.3 6.1 11.1 0.29 10.5 0.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF1634 PF07843.6 gi|518651846|ref|YP_008141366.1| - 10 5.8 13.3 45 3.7 9.2 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1634) OrfB_Zn_ribbon PF07282.6 gi|518651847|ref|YP_008141367.1| - 2.9e-11 42.8 0.1 1e-10 41.1 0.0 1.9 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518651847|ref|YP_008141367.1| - 0.0069 15.6 1.9 0.029 13.6 1.3 2.0 2 0 0 2 2 2 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.5 gi|518651847|ref|YP_008141367.1| - 0.041 13.3 6.5 0.033 13.6 2.5 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF3544 PF12064.3 gi|518651847|ref|YP_008141367.1| - 0.085 12.6 1.5 0.15 11.8 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3544) RecR PF02132.10 gi|518651847|ref|YP_008141367.1| - 0.12 11.7 0.8 6.1 6.3 0.0 2.4 2 0 0 2 2 2 0 RecR protein HypA PF01155.14 gi|518651847|ref|YP_008141367.1| - 0.13 11.9 0.1 0.33 10.6 0.1 1.6 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DUF1451 PF07295.6 gi|518651847|ref|YP_008141367.1| - 0.13 12.0 4.5 0.16 11.7 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) zinc_ribbon_5 PF13719.1 gi|518651847|ref|YP_008141367.1| - 6.2 6.4 6.4 11 5.7 2.6 2.8 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518651847|ref|YP_008141367.1| - 7.9 6.2 6.8 15 5.3 2.8 2.8 2 1 0 2 2 2 0 zinc-ribbon domain DUF3329 PF11808.3 gi|518651848|ref|YP_008141368.1| - 0.061 13.4 1.0 0.093 12.8 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3329) DUF2207 PF09972.4 gi|518651848|ref|YP_008141368.1| - 0.25 9.9 4.9 0.25 9.9 3.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FA_desaturase PF00487.19 gi|518651848|ref|YP_008141368.1| - 0.25 10.7 1.4 0.28 10.5 1.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase FA_hydroxylase PF04116.8 gi|518651848|ref|YP_008141368.1| - 0.4 11.0 2.3 0.54 10.6 1.6 1.2 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily IncA PF04156.9 gi|518651848|ref|YP_008141368.1| - 3.6 7.1 14.1 5.3 6.5 9.8 1.2 1 0 0 1 1 1 0 IncA protein Fig1 PF12351.3 gi|518651848|ref|YP_008141368.1| - 6.1 6.6 9.5 7.8 6.3 6.6 1.4 1 1 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 AA_permease PF00324.16 gi|518651849|ref|YP_008141369.1| - 7.2e-24 83.9 51.7 9.7e-24 83.5 35.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651849|ref|YP_008141369.1| - 1.3e-23 83.2 59.8 2.4e-23 82.3 41.6 1.3 1 1 0 1 1 1 1 Amino acid permease Nitroreductase PF00881.19 gi|518651850|ref|YP_008141370.1| - 2.2e-26 92.6 0.0 4.3e-26 91.6 0.0 1.5 1 1 0 1 1 1 1 Nitroreductase family NUDIX PF00293.23 gi|518651851|ref|YP_008141371.1| - 2.7e-19 69.1 0.0 3.4e-19 68.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain MFS_1 PF07690.11 gi|518651852|ref|YP_008141372.1| - 1.2e-26 93.3 30.9 1.2e-26 93.3 21.4 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651852|ref|YP_008141372.1| - 2.1e-23 82.6 35.4 1.1e-19 70.3 24.5 2.1 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518651853|ref|YP_008141373.1| - 8.3e-07 28.0 37.2 9.9e-07 27.7 24.0 2.1 1 1 0 1 1 1 1 Major Facilitator Superfamily Aldedh PF00171.17 gi|518651854|ref|YP_008141374.1| - 3.7e-111 371.7 0.0 4.4e-111 371.4 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|518651854|ref|YP_008141374.1| - 0.0001 21.1 0.9 0.00076 18.2 0.6 2.2 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF483 PF04467.7 gi|518651854|ref|YP_008141374.1| - 0.05 13.6 0.4 0.27 11.3 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF483) Frigida PF07899.6 gi|518651854|ref|YP_008141374.1| - 0.12 11.0 1.4 0.49 9.1 0.6 1.9 2 0 0 2 2 2 0 Frigida-like protein NTP_transferase PF00483.18 gi|518651855|ref|YP_008141375.1| - 3.4e-26 92.0 0.0 4.6e-26 91.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|518651855|ref|YP_008141375.1| - 2.2e-08 34.3 0.0 2.9e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2863 PF11062.3 gi|518651856|ref|YP_008141376.1| - 0.046 11.7 0.2 0.053 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) TFIIE_alpha PF02002.12 gi|518651856|ref|YP_008141376.1| - 0.056 12.9 0.7 0.087 12.3 0.5 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_10 PF04967.7 gi|518651857|ref|YP_008141377.1| - 6.1e-17 60.9 0.7 2e-16 59.2 0.1 2.0 2 0 0 2 2 2 1 HTH DNA binding domain HTH_5 PF01022.15 gi|518651857|ref|YP_008141377.1| - 0.003 17.1 0.0 0.19 11.4 0.0 3.1 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_Mga PF08280.6 gi|518651857|ref|YP_008141377.1| - 0.074 12.8 0.5 5.6 6.7 0.0 3.1 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_24 PF13412.1 gi|518651857|ref|YP_008141377.1| - 0.22 10.9 0.7 0.94 8.9 0.0 2.3 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding adh_short PF00106.20 gi|518651858|ref|YP_008141378.1| - 5.8e-32 110.9 0.0 7.6e-32 110.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518651858|ref|YP_008141378.1| - 4.7e-28 98.5 0.0 5.7e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518651858|ref|YP_008141378.1| - 3e-15 56.3 0.0 3.9e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|518651858|ref|YP_008141378.1| - 3.7e-07 29.8 0.1 5.2e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.5 gi|518651858|ref|YP_008141378.1| - 0.0027 16.9 0.3 0.0037 16.4 0.2 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.13 gi|518651858|ref|YP_008141378.1| - 0.097 12.3 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Limkain-b1 PF11608.3 gi|518651858|ref|YP_008141378.1| - 0.15 11.7 0.2 2.8 7.7 0.0 2.3 2 0 0 2 2 2 0 Limkain b1 MFS_1 PF07690.11 gi|518651860|ref|YP_008141380.1| - 9.8e-33 113.3 63.6 1.8e-25 89.4 25.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518651860|ref|YP_008141380.1| - 1.1e-30 106.6 23.7 1.3e-30 106.3 16.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PUCC PF03209.10 gi|518651860|ref|YP_008141380.1| - 0.00014 20.7 10.4 0.024 13.3 0.1 2.7 2 1 0 2 2 2 2 PUCC protein DUF2615 PF11027.3 gi|518651860|ref|YP_008141380.1| - 0.26 11.2 0.8 5.5 6.9 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2615) DHDPS PF00701.17 gi|518651862|ref|YP_008141382.1| - 5.1e-26 90.9 0.0 5.1e-26 90.9 0.0 1.1 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family CENP-B_N PF04218.8 gi|518651862|ref|YP_008141382.1| - 0.062 12.7 0.0 0.21 11.0 0.0 1.8 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain MR_MLE_C PF13378.1 gi|518651863|ref|YP_008141383.1| - 6.7e-19 67.9 0.0 1.3e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE PF01188.16 gi|518651863|ref|YP_008141383.1| - 3.5e-14 53.0 0.2 1.2e-13 51.3 0.0 2.0 2 0 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MR_MLE_N PF02746.11 gi|518651863|ref|YP_008141383.1| - 0.0041 17.1 0.0 0.007 16.3 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF4393 PF14337.1 gi|518651863|ref|YP_008141383.1| - 0.06 12.7 0.0 0.085 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) MoCF_biosynth PF00994.19 gi|518651864|ref|YP_008141384.1| - 2e-27 95.3 0.1 3.9e-27 94.4 0.1 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain DUF2240 PF09999.4 gi|518651865|ref|YP_008141385.1| - 4.3e-33 113.7 0.4 4.8e-33 113.6 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) TRM PF02005.11 gi|518651866|ref|YP_008141386.1| - 1.5e-54 185.3 0.0 3.3e-53 180.9 0.0 2.0 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Cons_hypoth95 PF03602.10 gi|518651866|ref|YP_008141386.1| - 0.014 14.8 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 NTPase_1 PF03266.10 gi|518651867|ref|YP_008141387.1| - 8.7e-37 126.4 3.8 9.9e-37 126.2 2.6 1.0 1 0 0 1 1 1 1 NTPase DUF2478 PF10649.4 gi|518651867|ref|YP_008141387.1| - 0.0069 15.7 0.1 0.017 14.4 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2478) DUF722 PF05263.6 gi|518651867|ref|YP_008141387.1| - 0.0094 16.0 0.6 0.015 15.4 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF722) AAA_5 PF07728.9 gi|518651867|ref|YP_008141387.1| - 0.039 13.6 0.2 0.39 10.4 0.1 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_14 PF13173.1 gi|518651867|ref|YP_008141387.1| - 0.042 13.7 0.7 0.18 11.7 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|518651867|ref|YP_008141387.1| - 0.085 12.9 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|518651867|ref|YP_008141387.1| - 0.11 12.8 1.1 0.16 12.2 0.8 1.4 1 1 0 1 1 1 0 AAA domain cobW PF02492.14 gi|518651867|ref|YP_008141387.1| - 0.23 10.9 2.3 1.1 8.6 1.6 1.9 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF381 PF04038.7 gi|518651868|ref|YP_008141388.1| - 9.8e-22 76.7 0.8 1.3e-21 76.3 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF381) DUF372 PF04036.7 gi|518651868|ref|YP_008141388.1| - 4e-19 67.7 0.0 5.7e-19 67.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF372) GPW_gp25 PF04965.9 gi|518651868|ref|YP_008141388.1| - 0.061 12.8 0.0 0.074 12.6 0.0 1.2 1 0 0 1 1 1 0 Gene 25-like lysozyme PcrB PF01884.12 gi|518651869|ref|YP_008141389.1| - 2.9e-66 223.0 0.7 3.3e-66 222.8 0.5 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|518651869|ref|YP_008141389.1| - 5.8e-09 35.5 0.0 1.4e-08 34.2 0.0 1.6 2 0 0 2 2 2 1 Histidine biosynthesis protein TMP-TENI PF02581.12 gi|518651869|ref|YP_008141389.1| - 0.00014 21.0 0.1 0.00093 18.3 0.0 2.1 2 0 0 2 2 2 1 Thiamine monophosphate synthase/TENI ThiG PF05690.9 gi|518651869|ref|YP_008141389.1| - 0.00042 19.4 0.2 0.00071 18.7 0.1 1.4 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|518651869|ref|YP_008141389.1| - 0.00052 18.9 0.0 0.0028 16.5 0.0 1.9 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.7 gi|518651869|ref|YP_008141389.1| - 0.0013 17.8 0.3 0.0079 15.2 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator DHO_dh PF01180.16 gi|518651869|ref|YP_008141389.1| - 0.0019 17.2 0.4 0.0029 16.5 0.2 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Trp_syntA PF00290.15 gi|518651869|ref|YP_008141389.1| - 0.0058 15.2 0.1 0.011 14.2 0.1 1.4 1 0 0 1 1 1 1 Tryptophan synthase alpha chain IMPDH PF00478.20 gi|518651869|ref|YP_008141389.1| - 0.0059 15.5 0.4 0.04 12.7 0.1 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Ribul_P_3_epim PF00834.14 gi|518651869|ref|YP_008141389.1| - 0.0065 15.6 0.4 0.053 12.6 0.2 2.1 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family NMO PF03060.10 gi|518651869|ref|YP_008141389.1| - 0.02 14.0 0.4 0.039 13.1 0.3 1.4 1 0 0 1 1 1 0 Nitronate monooxygenase NanE PF04131.9 gi|518651869|ref|YP_008141389.1| - 0.052 12.5 0.0 0.13 11.2 0.0 1.6 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase MTD PF01993.13 gi|518651869|ref|YP_008141389.1| - 0.091 11.7 0.1 0.58 9.1 0.0 2.0 2 0 0 2 2 2 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase YrhK PF14145.1 gi|518651870|ref|YP_008141390.1| - 5.2e-19 67.6 0.4 1e-18 66.6 0.3 1.5 1 0 0 1 1 1 1 YrhK-like protein PurS PF02700.9 gi|518651871|ref|YP_008141391.1| - 1.2e-19 70.0 0.4 1.4e-19 69.8 0.3 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase AIRS_C PF02769.17 gi|518651872|ref|YP_008141392.1| - 1.7e-44 151.4 0.4 5e-27 94.7 0.1 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|518651872|ref|YP_008141392.1| - 1.4e-36 124.5 0.1 6.5e-24 83.9 0.1 2.8 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain UPF0126 PF03458.8 gi|518651872|ref|YP_008141392.1| - 0.024 14.2 0.1 0.049 13.2 0.0 1.4 1 0 0 1 1 1 0 UPF0126 domain HTH_AsnC-type PF13404.1 gi|518651873|ref|YP_008141393.1| - 0.089 12.3 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain cwf21 PF08312.7 gi|518651873|ref|YP_008141393.1| - 1.3 8.9 3.7 0.44 10.4 0.6 1.7 2 0 0 2 2 2 0 cwf21 domain DUF4345 PF14248.1 gi|518651874|ref|YP_008141394.1| - 0.027 13.9 0.8 0.4 10.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4345) DUF872 PF05915.7 gi|518651874|ref|YP_008141394.1| - 0.041 13.7 0.4 0.26 11.1 0.1 2.1 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF3139 PF11337.3 gi|518651874|ref|YP_008141394.1| - 0.23 11.7 0.2 0.23 11.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) IncA PF04156.9 gi|518651874|ref|YP_008141394.1| - 1.4 8.5 10.1 0.059 12.9 1.4 2.0 2 0 0 2 2 2 0 IncA protein Lyase_1 PF00206.15 gi|518651876|ref|YP_008141396.1| - 1.1e-53 182.4 0.1 1.7e-53 181.8 0.1 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|518651876|ref|YP_008141396.1| - 2.2e-19 69.2 0.0 6e-19 67.8 0.0 1.8 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus FumaraseC_C PF10415.4 gi|518651876|ref|YP_008141396.1| - 0.0015 18.5 0.0 0.0042 17.1 0.0 1.7 1 0 0 1 1 1 1 Fumarase C C-terminus ACDC PF14733.1 gi|518651876|ref|YP_008141396.1| - 0.009 16.1 0.0 1.1 9.4 0.0 2.9 3 0 0 3 3 3 1 AP2-coincident C-terminal Mur_ligase_M PF08245.7 gi|518651876|ref|YP_008141396.1| - 0.046 13.7 0.4 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Mur ligase middle domain ASL_C2 PF14698.1 gi|518651876|ref|YP_008141396.1| - 0.12 12.4 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 Argininosuccinate lyase C-terminal Chlor_dismutase PF06778.7 gi|518651878|ref|YP_008141398.1| - 9.7e-49 165.6 0.3 1.2e-48 165.3 0.2 1.0 1 0 0 1 1 1 1 Chlorite dismutase DUF3688 PF12461.3 gi|518651878|ref|YP_008141398.1| - 0.31 11.4 6.6 4.5 7.7 1.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3688) Rhodanese PF00581.15 gi|518651879|ref|YP_008141399.1| - 1e-19 70.9 0.0 1.4e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Ribosomal_S17e PF00833.13 gi|518651880|ref|YP_008141400.1| - 1.3e-12 47.5 0.4 1.4e-12 47.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 DUF3819 PF12842.2 gi|518651880|ref|YP_008141400.1| - 0.068 12.8 0.2 0.098 12.3 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3819) Met_synt_B12 PF02965.12 gi|518651880|ref|YP_008141400.1| - 0.13 11.4 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 Vitamin B12 dependent methionine synthase, activation domain Usp PF00582.21 gi|518651881|ref|YP_008141401.1| - 1.3e-23 83.7 0.0 2.4e-23 82.8 0.0 1.4 1 1 0 1 1 1 1 Universal stress protein family RHH_2 PF03693.9 gi|518651881|ref|YP_008141401.1| - 0.028 14.6 0.0 0.054 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0156) Transaldolase PF00923.14 gi|518651881|ref|YP_008141401.1| - 0.09 11.8 0.4 0.11 11.5 0.3 1.0 1 0 0 1 1 1 0 Transaldolase Sugar_tr PF00083.19 gi|518651883|ref|YP_008141403.1| - 2.3e-69 234.1 30.4 2.9e-69 233.7 21.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518651883|ref|YP_008141403.1| - 7.4e-34 117.0 47.2 1.2e-31 109.7 23.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TroA PF01297.12 gi|518651883|ref|YP_008141403.1| - 0.028 13.6 0.0 0.26 10.4 0.0 2.0 2 0 0 2 2 2 0 Periplasmic solute binding protein family MFS_2 PF13347.1 gi|518651883|ref|YP_008141403.1| - 0.065 11.6 41.2 0.018 13.4 4.4 3.7 2 2 1 3 3 3 0 MFS/sugar transport protein MFS_3 PF05977.8 gi|518651883|ref|YP_008141403.1| - 0.35 8.9 6.7 0.075 11.1 0.3 2.2 2 0 0 2 2 2 0 Transmembrane secretion effector YrhK PF14145.1 gi|518651884|ref|YP_008141404.1| - 1.4e-14 53.4 1.3 1.4e-14 53.4 0.9 1.9 2 0 0 2 2 2 1 YrhK-like protein Pyridoxal_deC PF00282.14 gi|518651885|ref|YP_008141405.1| - 1e-73 247.9 0.0 1.2e-73 247.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|518651885|ref|YP_008141405.1| - 1.4e-07 30.6 0.0 7.5e-07 28.2 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V GDC-P PF02347.11 gi|518651885|ref|YP_008141405.1| - 0.064 11.9 0.0 0.12 11.0 0.0 1.3 1 0 0 1 1 1 0 Glycine cleavage system P-protein PRA-CH PF01502.13 gi|518651886|ref|YP_008141406.1| - 1.9e-32 110.7 0.3 2.9e-32 110.1 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase PRA-PH PF01503.12 gi|518651886|ref|YP_008141406.1| - 1.8e-09 37.7 0.0 2.9e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.12 gi|518651886|ref|YP_008141406.1| - 0.07 13.0 0.2 0.16 11.9 0.1 1.6 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain His_biosynth PF00977.16 gi|518651887|ref|YP_008141407.1| - 3.9e-76 255.3 2.0 4.4e-76 255.1 1.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.10 gi|518651887|ref|YP_008141407.1| - 9.1e-06 25.0 2.5 4e-05 22.9 0.8 2.0 1 1 0 2 2 2 1 Nitronate monooxygenase ThiG PF05690.9 gi|518651887|ref|YP_008141407.1| - 1.4e-05 24.2 0.5 0.0034 16.5 0.1 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.12 gi|518651887|ref|YP_008141407.1| - 1.5e-05 24.1 0.2 0.017 14.2 0.1 2.1 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI Dus PF01207.12 gi|518651887|ref|YP_008141407.1| - 2.5e-05 23.2 0.1 0.1 11.3 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.16 gi|518651887|ref|YP_008141407.1| - 0.00017 20.6 0.7 0.00028 19.9 0.0 1.6 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase PcrB PF01884.12 gi|518651887|ref|YP_008141407.1| - 0.0019 17.5 1.2 0.013 14.7 0.1 2.1 2 0 0 2 2 2 1 PcrB family IMPDH PF00478.20 gi|518651887|ref|YP_008141407.1| - 0.13 11.1 0.8 10 4.8 0.0 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.16 gi|518651888|ref|YP_008141408.1| - 4.7e-44 150.3 0.2 6.2e-44 149.9 0.1 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.12 gi|518651888|ref|YP_008141408.1| - 0.00037 19.8 0.7 0.081 12.1 0.1 2.1 2 0 0 2 2 2 2 PcrB family Radical_SAM PF04055.16 gi|518651888|ref|YP_008141408.1| - 0.0041 17.3 0.0 0.62 10.2 0.0 2.0 1 1 1 2 2 2 2 Radical SAM superfamily Rota_NSP3 PF01665.11 gi|518651888|ref|YP_008141408.1| - 0.0052 15.7 0.0 0.009 15.0 0.0 1.3 1 0 0 1 1 1 1 Rotavirus non-structural protein NSP3 Cofilin_ADF PF00241.15 gi|518651888|ref|YP_008141408.1| - 0.029 14.2 0.1 0.049 13.5 0.0 1.3 1 0 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein IGPS PF00218.16 gi|518651888|ref|YP_008141408.1| - 0.061 12.3 0.0 1.2 8.1 0.0 2.0 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase Y1_Tnp PF01797.11 gi|518651888|ref|YP_008141408.1| - 0.062 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Transposase IS200 like NMO PF03060.10 gi|518651888|ref|YP_008141408.1| - 0.095 11.8 0.0 0.22 10.6 0.0 1.5 2 0 0 2 2 2 0 Nitronate monooxygenase GATase PF00117.23 gi|518651889|ref|YP_008141409.1| - 5.8e-25 87.8 0.1 6.7e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.14 gi|518651889|ref|YP_008141409.1| - 0.00026 20.6 0.0 0.056 13.0 0.0 2.0 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|518651889|ref|YP_008141409.1| - 0.0011 18.4 0.1 0.19 11.1 0.0 2.1 2 0 0 2 2 2 2 Peptidase C26 GATase_3 PF07685.9 gi|518651889|ref|YP_008141409.1| - 0.013 15.1 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain BPL_N PF09825.4 gi|518651889|ref|YP_008141409.1| - 0.022 13.5 0.0 0.033 13.0 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal PBP-Tp47_c PF14888.1 gi|518651889|ref|YP_008141409.1| - 0.1 12.2 0.1 0.16 11.5 0.1 1.2 1 0 0 1 1 1 0 Penicillin-binding protein Tp47 domain C IGPD PF00475.13 gi|518651890|ref|YP_008141410.1| - 6.1e-35 120.2 0.1 7.2e-35 119.9 0.1 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Histidinol_dh PF00815.15 gi|518651891|ref|YP_008141411.1| - 9.7e-110 367.0 0.0 5.4e-73 245.9 0.0 2.0 1 1 1 2 2 2 2 Histidinol dehydrogenase HisG PF01634.13 gi|518651892|ref|YP_008141412.1| - 6.3e-42 142.9 0.0 7.9e-42 142.6 0.0 1.1 1 0 0 1 1 1 1 ATP phosphoribosyltransferase tRNA-synt_His PF13393.1 gi|518651893|ref|YP_008141413.1| - 1.9e-19 69.8 0.0 1.4e-09 37.4 0.0 2.8 1 1 1 2 2 2 2 Histidyl-tRNA synthetase ChuX_HutX PF06228.8 gi|518651894|ref|YP_008141414.1| - 0.047 13.0 0.0 0.047 13.0 0.0 1.0 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX SIS PF01380.17 gi|518651895|ref|YP_008141415.1| - 5.4e-17 61.6 0.6 2.8e-11 43.1 0.0 2.7 2 1 0 2 2 2 2 SIS domain SIS_2 PF13580.1 gi|518651895|ref|YP_008141415.1| - 0.0017 18.0 1.4 4.5 7.0 0.0 3.3 2 1 1 3 3 3 3 SIS domain Abhydrolase_3 PF07859.8 gi|518651896|ref|YP_008141416.1| - 1.3e-62 211.1 0.0 1.7e-62 210.7 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF2424 PF10340.4 gi|518651896|ref|YP_008141416.1| - 4.8e-06 25.4 0.0 6.5e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2424) Abhydrolase_5 PF12695.2 gi|518651896|ref|YP_008141416.1| - 0.00042 20.0 0.0 0.00059 19.6 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family COesterase PF00135.23 gi|518651896|ref|YP_008141416.1| - 0.022 13.4 0.0 0.2 10.3 0.0 2.0 2 0 0 2 2 2 0 Carboxylesterase family AAA_assoc_C PF09821.4 gi|518651897|ref|YP_008141417.1| - 3.5e-29 101.4 0.0 4.6e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 C-terminal AAA-associated domain BPD_transp_1 PF00528.17 gi|518651898|ref|YP_008141418.1| - 1.2e-18 67.3 36.6 3.5e-14 52.7 8.1 3.2 3 0 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component DUF2116 PF09889.4 gi|518651898|ref|YP_008141418.1| - 0.048 13.4 0.0 0.048 13.4 0.0 3.4 4 0 0 4 4 4 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) ETRAMP PF09716.5 gi|518651898|ref|YP_008141418.1| - 0.097 12.6 1.4 0.3 11.0 0.1 2.6 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DUF334 PF03904.8 gi|518651898|ref|YP_008141418.1| - 0.15 11.3 1.0 0.25 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF334) ABC_tran PF00005.22 gi|518651899|ref|YP_008141419.1| - 1.3e-27 96.7 0.0 1.8e-27 96.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518651899|ref|YP_008141419.1| - 1.2e-10 41.8 0.2 0.00058 19.9 0.0 2.3 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|518651899|ref|YP_008141419.1| - 0.00012 21.3 0.1 0.029 13.4 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|518651899|ref|YP_008141419.1| - 0.00074 18.7 0.0 0.00095 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|518651899|ref|YP_008141419.1| - 0.00075 20.3 0.4 0.0029 18.3 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|518651899|ref|YP_008141419.1| - 0.00091 19.2 0.0 0.0019 18.2 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.14 gi|518651899|ref|YP_008141419.1| - 0.00093 18.4 0.4 0.33 10.1 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|518651899|ref|YP_008141419.1| - 0.003 17.0 0.0 0.0069 15.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|518651899|ref|YP_008141419.1| - 0.0055 16.8 0.1 0.018 15.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|518651899|ref|YP_008141419.1| - 0.013 15.8 0.4 0.023 15.0 0.3 1.3 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|518651899|ref|YP_008141419.1| - 0.015 14.7 1.0 0.3 10.4 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_18 PF13238.1 gi|518651899|ref|YP_008141419.1| - 0.017 15.4 0.0 0.036 14.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain MobB PF03205.9 gi|518651899|ref|YP_008141419.1| - 0.03 14.0 0.1 0.057 13.1 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Arch_ATPase PF01637.13 gi|518651899|ref|YP_008141419.1| - 0.071 12.8 0.2 0.16 11.6 0.0 1.6 2 0 0 2 2 2 0 Archaeal ATPase AAA_24 PF13479.1 gi|518651899|ref|YP_008141419.1| - 0.075 12.6 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|518651899|ref|YP_008141419.1| - 0.076 12.4 0.1 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|518651899|ref|YP_008141419.1| - 0.1 12.5 0.3 0.15 12.0 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.24 gi|518651899|ref|YP_008141419.1| - 0.12 12.5 0.0 0.34 11.1 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.18 gi|518651899|ref|YP_008141419.1| - 0.13 12.1 0.2 0.19 11.7 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.7 gi|518651899|ref|YP_008141419.1| - 0.18 11.4 0.2 0.34 10.5 0.2 1.4 1 0 0 1 1 1 0 NACHT domain RNase_Zc3h12a PF11977.3 gi|518651900|ref|YP_008141420.1| - 7.8e-20 71.2 0.2 9.5e-20 71.0 0.1 1.1 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain Rubrerythrin PF02915.12 gi|518651901|ref|YP_008141421.1| - 0.0033 17.7 0.8 0.0043 17.3 0.5 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2382 PF09557.5 gi|518651901|ref|YP_008141421.1| - 0.022 14.6 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2382) RNase_H_2 PF13482.1 gi|518651901|ref|YP_008141421.1| - 0.037 13.8 0.1 0.053 13.3 0.0 1.3 1 1 0 1 1 1 0 RNase_H superfamily 4HBT PF03061.17 gi|518651902|ref|YP_008141422.1| - 2e-13 50.2 0.0 2.6e-13 49.8 0.0 1.1 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.1 gi|518651902|ref|YP_008141422.1| - 9.1e-07 28.9 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.1 gi|518651902|ref|YP_008141422.1| - 8.9e-06 25.6 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF2004 PF09406.5 gi|518651903|ref|YP_008141423.1| - 2.2e-09 37.3 1.8 2.7e-09 37.0 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2004) HJURP_C PF12347.3 gi|518651903|ref|YP_008141423.1| - 0.17 11.4 1.7 0.87 9.2 1.2 2.1 1 1 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat G10 PF01125.12 gi|518651903|ref|YP_008141423.1| - 0.53 9.8 2.4 1.6 8.2 1.3 1.9 1 1 0 1 1 1 0 G10 protein DUF790 PF05626.6 gi|518651904|ref|YP_008141424.1| - 4.3e-58 196.6 5.6 1.1e-57 195.3 3.9 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF790) HTH_36 PF13730.1 gi|518651904|ref|YP_008141424.1| - 0.024 14.7 0.2 6.6 6.9 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain DUF3753 PF12575.3 gi|518651904|ref|YP_008141424.1| - 0.046 13.5 0.9 0.11 12.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3753) ResIII PF04851.10 gi|518651905|ref|YP_008141425.1| - 1.6e-18 67.2 0.0 1.8e-17 63.7 0.0 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|518651905|ref|YP_008141425.1| - 1.5e-13 50.4 0.0 2.9e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|518651905|ref|YP_008141425.1| - 7.2e-09 35.3 0.0 1.4e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 gi|518651905|ref|YP_008141425.1| - 0.0029 16.4 0.0 0.0091 14.8 0.0 1.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain ABM PF03992.11 gi|518651906|ref|YP_008141426.1| - 6.6e-14 51.7 0.0 7.5e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF4188 PF13826.1 gi|518651906|ref|YP_008141426.1| - 0.0073 16.3 0.0 0.0086 16.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4188) SOR PF07682.6 gi|518651906|ref|YP_008141426.1| - 0.022 13.3 0.1 0.58 8.6 0.0 2.0 1 1 1 2 2 2 0 Sulphur oxygenase reductase Cpn60_TCP1 PF00118.19 gi|518651907|ref|YP_008141427.1| - 5.4e-162 539.7 16.8 6.2e-162 539.6 11.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MCP_N PF05581.7 gi|518651907|ref|YP_008141427.1| - 0.036 14.1 0.2 2.3 8.4 0.1 3.2 2 0 0 2 2 2 0 Vibrio chemotaxis protein N terminus M20_dimer PF07687.9 gi|518651907|ref|YP_008141427.1| - 0.051 13.3 0.3 4.3 7.1 0.0 3.1 3 1 0 3 3 3 0 Peptidase dimerisation domain GntR PF00392.16 gi|518651908|ref|YP_008141428.1| - 0.0026 17.1 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Phage_rep_org_N PF09681.5 gi|518651908|ref|YP_008141428.1| - 0.0093 15.5 0.0 0.01 15.3 0.0 1.1 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) DUF1648 PF07853.6 gi|518651909|ref|YP_008141429.1| - 7.6e-11 41.3 0.6 7.6e-11 41.3 0.4 5.2 4 2 2 6 6 6 1 Protein of unknown function (DUF1648) FA_desaturase PF00487.19 gi|518651909|ref|YP_008141429.1| - 0.0018 17.7 0.1 0.0018 17.7 0.1 2.3 1 1 0 2 2 2 1 Fatty acid desaturase DUF2448 PF10476.4 gi|518651909|ref|YP_008141429.1| - 0.19 11.2 1.7 6 6.3 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function C-terminus (DUF2448) Molybdopterin PF00384.17 gi|518651910|ref|YP_008141430.1| - 3.5e-74 250.0 0.0 4.5e-74 249.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|518651910|ref|YP_008141430.1| - 2.5e-25 88.4 0.0 5e-25 87.4 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.11 gi|518651910|ref|YP_008141430.1| - 3.7e-14 52.2 0.9 7.1e-14 51.3 0.6 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain TroA PF01297.12 gi|518651910|ref|YP_008141430.1| - 0.016 14.4 0.1 0.19 10.9 0.0 2.3 2 0 0 2 2 2 0 Periplasmic solute binding protein family DUF3724 PF12521.3 gi|518651911|ref|YP_008141431.1| - 0.066 12.9 0.5 0.1 12.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) Proteasome PF00227.21 gi|518651912|ref|YP_008141432.1| - 1.5e-54 184.2 0.8 1.7e-54 184.0 0.6 1.0 1 0 0 1 1 1 1 Proteasome subunit Beta-Casp PF10996.3 gi|518651913|ref|YP_008141433.1| - 2.8e-31 108.0 0.0 1.3e-30 105.9 0.0 2.0 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.22 gi|518651913|ref|YP_008141433.1| - 7e-22 78.0 0.2 1.3e-21 77.1 0.2 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|518651913|ref|YP_008141433.1| - 2.9e-09 36.7 0.1 8.1e-09 35.2 0.1 1.7 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.7 gi|518651913|ref|YP_008141433.1| - 1.4e-08 34.4 0.0 4.4e-08 32.8 0.0 1.9 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|518651913|ref|YP_008141433.1| - 0.022 14.4 0.0 0.057 13.1 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Tap-RNA_bind PF09162.5 gi|518651913|ref|YP_008141433.1| - 0.16 11.5 0.0 8.4 6.0 0.0 2.5 2 0 0 2 2 2 0 Tap, RNA-binding AA_permease PF00324.16 gi|518651914|ref|YP_008141434.1| - 9.1e-29 100.1 72.9 1.2e-28 99.7 50.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518651914|ref|YP_008141434.1| - 2.5e-22 79.0 74.9 4.7e-22 78.1 52.0 1.3 1 1 0 1 1 1 1 Amino acid permease Transaldolase PF00923.14 gi|518651915|ref|YP_008141435.1| - 3.7e-61 206.7 1.5 7.9e-61 205.6 1.1 1.5 1 1 0 1 1 1 1 Transaldolase Aldolase PF01081.14 gi|518651915|ref|YP_008141435.1| - 0.022 13.9 2.2 0.29 10.2 0.5 2.2 1 1 1 2 2 2 0 KDPG and KHG aldolase FMN_dh PF01070.13 gi|518651915|ref|YP_008141435.1| - 0.061 12.1 0.1 0.1 11.4 0.0 1.3 1 1 0 1 1 1 0 FMN-dependent dehydrogenase Transket_pyr PF02779.19 gi|518651916|ref|YP_008141436.1| - 1.2e-36 125.8 0.0 1.6e-36 125.4 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.15 gi|518651916|ref|YP_008141436.1| - 8.2e-31 106.5 0.0 1.7e-30 105.5 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transketolase_N PF00456.16 gi|518651917|ref|YP_008141437.1| - 2.1e-63 214.1 0.0 3.1e-63 213.5 0.0 1.2 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.1 gi|518651917|ref|YP_008141437.1| - 6.4e-11 41.6 0.3 0.00022 20.2 0.1 3.1 2 1 0 3 3 3 3 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.16 gi|518651917|ref|YP_008141437.1| - 7e-06 25.6 0.1 0.00018 21.0 0.0 2.2 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.15 gi|518651917|ref|YP_008141437.1| - 0.0022 16.7 0.0 0.0033 16.1 0.0 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component XFP_N PF09364.5 gi|518651917|ref|YP_008141437.1| - 0.0054 15.3 0.1 0.011 14.3 0.0 1.7 2 0 0 2 2 2 1 XFP N-terminal domain Hexapep PF00132.19 gi|518651918|ref|YP_008141438.1| - 6e-15 53.9 21.5 5e-05 22.6 1.5 4.3 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|518651918|ref|YP_008141438.1| - 4.2e-06 26.1 22.2 0.00018 20.9 2.7 4.8 4 1 1 5 5 5 2 Hexapeptide repeat of succinyl-transferase CobS PF02654.10 gi|518651919|ref|YP_008141439.1| - 3.1e-37 128.4 8.8 3.8e-37 128.1 6.1 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase A_deaminase_N PF08451.6 gi|518651920|ref|YP_008141440.1| - 0.13 12.2 0.4 0.13 12.2 0.3 1.6 2 0 0 2 2 2 0 Adenosine/AMP deaminase N-terminal POPLD PF08170.7 gi|518651920|ref|YP_008141440.1| - 0.14 12.0 0.4 0.27 11.1 0.0 1.7 2 1 0 2 2 2 0 POPLD (NUC188) domain ArsR PF09824.4 gi|518651921|ref|YP_008141441.1| - 1.9e-60 202.8 0.2 2.2e-60 202.5 0.2 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator Trm56 PF01994.11 gi|518651922|ref|YP_008141442.1| - 1.9e-43 147.0 0.2 3.7e-43 146.1 0.2 1.5 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 HD PF01966.17 gi|518651922|ref|YP_008141442.1| - 1.9e-16 60.1 0.4 3.8e-16 59.2 0.3 1.5 1 0 0 1 1 1 1 HD domain Borealin PF10512.4 gi|518651922|ref|YP_008141442.1| - 0.0033 17.3 0.0 0.12 12.2 0.0 2.3 2 0 0 2 2 2 1 Cell division cycle-associated protein 8 ECH PF00378.15 gi|518651922|ref|YP_008141442.1| - 0.0076 15.3 0.0 0.016 14.3 0.0 1.5 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family HDOD PF08668.7 gi|518651922|ref|YP_008141442.1| - 0.13 11.5 0.1 4.2 6.5 0.1 2.2 1 1 1 2 2 2 0 HDOD domain MarR PF01047.17 gi|518651923|ref|YP_008141443.1| - 6.3e-08 32.2 0.0 1.1e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|518651923|ref|YP_008141443.1| - 6.7e-08 32.0 0.1 1.5e-07 30.9 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.1 gi|518651923|ref|YP_008141443.1| - 9.6e-07 28.1 0.0 2.2e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|518651923|ref|YP_008141443.1| - 0.00032 20.3 0.0 0.00058 19.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|518651923|ref|YP_008141443.1| - 0.00041 20.1 0.0 0.00071 19.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sulfolobus_pRN PF05584.6 gi|518651923|ref|YP_008141443.1| - 0.00046 20.1 0.0 0.00084 19.2 0.0 1.4 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein HTH_10 PF04967.7 gi|518651923|ref|YP_008141443.1| - 0.00091 18.7 0.1 0.01 15.4 0.1 2.2 2 0 0 2 2 2 1 HTH DNA binding domain TrmB PF01978.14 gi|518651923|ref|YP_008141443.1| - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|518651923|ref|YP_008141443.1| - 0.0022 17.5 0.0 0.004 16.7 0.0 1.3 1 0 0 1 1 1 1 MarR family Sigma70_r4_2 PF08281.7 gi|518651923|ref|YP_008141443.1| - 0.0053 16.1 0.0 0.014 14.8 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_DeoR PF08220.7 gi|518651923|ref|YP_008141443.1| - 0.009 15.5 0.0 0.018 14.5 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Sigma70_r4 PF04545.11 gi|518651923|ref|YP_008141443.1| - 0.013 14.7 0.0 0.026 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Mga PF08280.6 gi|518651923|ref|YP_008141443.1| - 0.03 14.0 0.1 0.064 13.0 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_23 PF13384.1 gi|518651923|ref|YP_008141443.1| - 0.035 13.7 0.0 0.064 12.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.1 gi|518651923|ref|YP_008141443.1| - 0.035 14.1 0.0 0.063 13.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.1 gi|518651923|ref|YP_008141443.1| - 0.062 13.5 0.1 0.15 12.2 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.6 gi|518651923|ref|YP_008141443.1| - 0.073 12.7 0.0 0.26 10.9 0.0 1.9 3 0 0 3 3 3 0 ECF sigma factor UPF0122 PF04297.9 gi|518651923|ref|YP_008141443.1| - 0.095 12.7 0.1 0.48 10.4 0.0 2.1 3 0 0 3 3 3 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_34 PF13601.1 gi|518651923|ref|YP_008141443.1| - 0.11 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain MFS_1 PF07690.11 gi|518651925|ref|YP_008141445.1| - 5.4e-42 143.7 59.2 1.6e-34 119.1 26.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518651925|ref|YP_008141445.1| - 7.9e-07 27.5 2.9 7.9e-07 27.5 2.0 2.0 2 0 0 2 2 2 1 Transmembrane secretion effector Sugar_tr PF00083.19 gi|518651925|ref|YP_008141445.1| - 7e-05 21.5 5.7 7e-05 21.5 3.9 2.7 2 1 0 2 2 2 1 Sugar (and other) transporter DrsE PF02635.10 gi|518651926|ref|YP_008141446.1| - 3.4e-10 40.0 0.0 3.8e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF2283 PF10049.4 gi|518651927|ref|YP_008141447.1| - 7e-07 29.0 1.1 7.2e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2283) DUF4258 PF14076.1 gi|518651928|ref|YP_008141448.1| - 3.6e-05 23.6 0.1 3.7e-05 23.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4258) GerA PF03323.8 gi|518651928|ref|YP_008141448.1| - 0.032 12.3 0.0 0.035 12.2 0.0 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein PIN PF01850.16 gi|518651929|ref|YP_008141449.1| - 1.8e-05 25.0 0.0 2.7e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 PIN domain LRR_5 PF13306.1 gi|518651929|ref|YP_008141449.1| - 0.062 13.0 0.1 0.076 12.7 0.1 1.2 1 0 0 1 1 1 0 Leucine rich repeats (6 copies) RHH_3 PF12651.2 gi|518651930|ref|YP_008141450.1| - 0.0082 15.8 1.5 0.54 10.0 0.1 2.6 2 1 0 2 2 2 2 Ribbon-helix-helix domain CcdA PF07362.7 gi|518651930|ref|YP_008141450.1| - 0.0086 15.9 0.3 0.15 11.9 0.0 2.0 1 1 1 2 2 2 1 Post-segregation antitoxin CcdA FH2 PF02181.18 gi|518651930|ref|YP_008141450.1| - 0.018 13.9 0.7 0.019 13.9 0.5 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain SRP54_N PF02881.14 gi|518651930|ref|YP_008141450.1| - 0.2 11.7 2.2 0.75 9.9 0.1 2.2 2 1 0 2 2 2 0 SRP54-type protein, helical bundle domain Phage_integrase PF00589.17 gi|518651931|ref|YP_008141451.1| - 0.003 17.2 0.1 0.0084 15.7 0.1 1.7 2 0 0 2 2 2 1 Phage integrase family Apc4 PF12896.2 gi|518651931|ref|YP_008141451.1| - 0.024 13.9 0.0 0.033 13.5 0.0 1.3 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 PMT_C PF11647.3 gi|518651931|ref|YP_008141451.1| - 0.043 13.4 0.0 0.084 12.5 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of Pasteurella multocida toxin residues 569-1285 SopA PF13981.1 gi|518651931|ref|YP_008141451.1| - 0.09 12.7 0.1 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 SopA-like central domain zf-C3HC4_3 PF13920.1 gi|518651934|ref|YP_008141454.1| - 0.0034 17.0 0.8 0.0055 16.3 0.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|518651934|ref|YP_008141454.1| - 0.011 14.9 2.7 0.018 14.2 1.9 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF4480 PF13715.1 gi|518651934|ref|YP_008141454.1| - 0.24 11.4 0.1 0.24 11.4 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4480) zf-C3HC4_2 PF13923.1 gi|518651934|ref|YP_008141454.1| - 0.25 11.3 1.8 0.59 10.1 1.3 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AAA_10 PF12846.2 gi|518651935|ref|YP_008141455.1| - 7.5e-11 42.0 0.7 2.1e-06 27.3 0.1 2.3 1 1 0 2 2 2 2 AAA-like domain AAA_22 PF13401.1 gi|518651935|ref|YP_008141455.1| - 7.4e-06 26.1 0.0 0.029 14.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.13 gi|518651935|ref|YP_008141455.1| - 0.00064 19.2 0.0 0.0013 18.3 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.22 gi|518651935|ref|YP_008141455.1| - 0.0037 17.5 0.0 0.2 11.9 0.0 2.5 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.1 gi|518651935|ref|YP_008141455.1| - 0.0041 17.1 0.0 0.26 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain RNA_helicase PF00910.17 gi|518651935|ref|YP_008141455.1| - 0.014 15.5 0.0 0.13 12.4 0.0 2.5 2 0 0 2 2 2 0 RNA helicase TrwB_AAD_bind PF10412.4 gi|518651935|ref|YP_008141455.1| - 0.017 13.7 0.0 0.044 12.4 0.0 1.6 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Baculo_PEP_N PF04512.7 gi|518651935|ref|YP_008141455.1| - 0.055 13.4 0.6 0.48 10.4 0.1 2.7 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, N terminus IstB_IS21 PF01695.12 gi|518651935|ref|YP_008141455.1| - 0.094 12.1 0.0 0.24 10.7 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF87 PF01935.12 gi|518651935|ref|YP_008141455.1| - 0.63 9.8 9.0 0.68 9.7 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function DUF87 z-alpha PF02295.12 gi|518651935|ref|YP_008141455.1| - 0.78 9.5 6.1 11 5.9 0.2 3.7 4 0 0 4 4 4 0 Adenosine deaminase z-alpha domain DUF4271 PF14093.1 gi|518651936|ref|YP_008141456.1| - 0.034 13.8 10.3 0.04 13.6 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) DUF4013 PF13197.1 gi|518651936|ref|YP_008141456.1| - 0.037 13.3 4.2 0.048 12.9 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) GpcrRhopsn4 PF10192.4 gi|518651936|ref|YP_008141456.1| - 0.1 11.7 7.3 0.11 11.6 5.1 1.0 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain DUF4149 PF13664.1 gi|518651936|ref|YP_008141456.1| - 0.12 12.4 3.0 0.16 12.0 2.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) DUF2207 PF09972.4 gi|518651936|ref|YP_008141456.1| - 0.47 8.9 2.8 0.48 8.9 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NVEALA PF14055.1 gi|518651936|ref|YP_008141456.1| - 0.62 9.8 2.2 12 5.6 0.2 2.1 1 1 1 2 2 2 0 NVEALA protein DUF3139 PF11337.3 gi|518651936|ref|YP_008141456.1| - 0.87 9.9 6.8 4.3 7.6 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF3920 PF13058.1 gi|518651937|ref|YP_008141457.1| - 0.018 14.8 0.3 0.027 14.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3920) Aspzincin_M35 PF14521.1 gi|518651937|ref|YP_008141457.1| - 0.018 15.5 2.2 0.16 12.5 1.5 2.0 1 1 0 1 1 1 0 Lysine-specific metallo-endopeptidase SprT-like PF10263.4 gi|518651937|ref|YP_008141457.1| - 0.022 14.4 0.1 0.041 13.5 0.1 1.4 1 0 0 1 1 1 0 SprT-like family 2TM PF13239.1 gi|518651938|ref|YP_008141458.1| - 0.038 14.0 1.8 0.043 13.8 1.2 1.1 1 0 0 1 1 1 0 2TM domain PAP2 PF01569.16 gi|518651938|ref|YP_008141458.1| - 0.14 11.8 1.2 0.19 11.3 0.8 1.1 1 0 0 1 1 1 0 PAP2 superfamily DUF2207 PF09972.4 gi|518651938|ref|YP_008141458.1| - 0.42 9.1 4.1 0.44 9.0 2.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Herpes_UL20 PF04544.7 gi|518651938|ref|YP_008141458.1| - 0.52 10.1 5.5 0.61 9.8 3.8 1.1 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 DUF3139 PF11337.3 gi|518651938|ref|YP_008141458.1| - 0.62 10.3 5.1 0.58 10.4 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF1673 PF07895.6 gi|518651938|ref|YP_008141458.1| - 4.5 6.7 7.1 6.2 6.2 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1673) N6_N4_Mtase PF01555.13 gi|518651939|ref|YP_008141459.1| - 2.5e-35 122.0 0.0 4.4e-35 121.2 0.0 1.4 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|518651939|ref|YP_008141459.1| - 7e-09 35.7 0.0 0.0043 17.0 0.0 2.6 3 0 0 3 3 3 2 Methyltransferase domain UPF0020 PF01170.13 gi|518651939|ref|YP_008141459.1| - 2.7e-06 27.0 0.0 0.0038 16.8 0.0 2.7 3 0 0 3 3 3 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.7 gi|518651939|ref|YP_008141459.1| - 0.028 14.9 0.0 0.095 13.2 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518651939|ref|YP_008141459.1| - 0.079 12.0 0.0 0.52 9.3 0.0 2.1 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|518651939|ref|YP_008141459.1| - 0.11 12.1 0.2 1 8.9 0.0 2.3 2 1 0 2 2 2 0 Methyltransferase domain RE_MjaI PF09568.5 gi|518651940|ref|YP_008141460.1| - 2.4e-48 163.8 2.5 3.3e-48 163.4 1.8 1.2 1 0 0 1 1 1 1 MjaI restriction endonuclease Phage_integrase PF00589.17 gi|518651941|ref|YP_008141461.1| - 2.3e-22 79.4 0.1 5.4e-22 78.2 0.1 1.6 1 1 0 1 1 1 1 Phage integrase family iPGM_N PF06415.8 gi|518651941|ref|YP_008141461.1| - 0.075 12.3 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) Aldose_epim PF01263.15 gi|518651944|ref|YP_008141464.1| - 7.2e-24 84.4 0.1 1.3e-23 83.5 0.0 1.4 1 1 0 1 1 1 1 Aldose 1-epimerase SelA PF03841.8 gi|518651945|ref|YP_008141465.1| - 2e-07 30.0 0.8 9.3e-07 27.9 0.6 2.2 1 1 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.15 gi|518651945|ref|YP_008141465.1| - 3.4e-05 22.2 0.1 4.9e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|518651945|ref|YP_008141465.1| - 0.0011 17.7 0.1 0.0014 17.4 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V NMO PF03060.10 gi|518651945|ref|YP_008141465.1| - 0.053 12.6 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 Nitronate monooxygenase adh_short_C2 PF13561.1 gi|518651946|ref|YP_008141466.1| - 2.6e-26 92.8 0.1 3.1e-26 92.5 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|518651946|ref|YP_008141466.1| - 2.1e-18 66.8 0.0 4.3e-18 65.7 0.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|518651946|ref|YP_008141466.1| - 4.9e-06 26.3 0.0 3e-05 23.7 0.0 2.0 1 1 0 1 1 1 1 KR domain Peptidase_M49 PF03571.10 gi|518651946|ref|YP_008141466.1| - 0.014 13.5 0.3 0.017 13.2 0.2 1.2 1 0 0 1 1 1 0 Peptidase family M49 AA_permease_2 PF13520.1 gi|518651947|ref|YP_008141467.1| - 4.8e-16 58.3 64.3 4.8e-16 58.3 44.6 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518651947|ref|YP_008141467.1| - 1.8e-11 43.0 71.7 4.1e-11 41.9 49.7 1.5 1 1 0 1 1 1 1 Amino acid permease HTH_10 PF04967.7 gi|518651948|ref|YP_008141468.1| - 4.3e-17 61.4 0.0 7.4e-17 60.6 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4_2 PF08281.7 gi|518651948|ref|YP_008141468.1| - 0.042 13.3 0.1 0.083 12.3 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF1160 PF06648.6 gi|518651948|ref|YP_008141468.1| - 0.061 13.0 2.9 0.88 9.3 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1160) Toprim PF01751.17 gi|518651948|ref|YP_008141468.1| - 0.13 12.2 0.3 0.36 10.8 0.1 1.7 2 0 0 2 2 2 0 Toprim domain Peptidase_M20 PF01546.23 gi|518651949|ref|YP_008141469.1| - 2.9e-23 82.3 0.0 3.8e-23 81.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518651949|ref|YP_008141469.1| - 7.8e-06 25.6 0.0 1.4e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain DUF2959 PF11172.3 gi|518651949|ref|YP_008141469.1| - 0.092 12.4 0.3 0.22 11.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2959) Aminotran_3 PF00202.16 gi|518651950|ref|YP_008141470.1| - 1.5e-77 260.7 0.0 1.8e-77 260.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta_elim_lyase PF01212.16 gi|518651950|ref|YP_008141470.1| - 0.15 11.2 0.0 0.28 10.2 0.0 1.5 1 0 0 1 1 1 0 Beta-eliminating lyase HTH_24 PF13412.1 gi|518651951|ref|YP_008141471.1| - 3.4e-12 45.5 0.5 9.3e-12 44.1 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518651951|ref|YP_008141471.1| - 3e-10 39.4 0.0 5.2e-10 38.6 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|518651951|ref|YP_008141471.1| - 5.3e-09 35.6 0.3 7.8e-09 35.1 0.2 1.2 1 0 0 1 1 1 1 AsnC family MarR_2 PF12802.2 gi|518651951|ref|YP_008141471.1| - 0.0047 16.5 0.0 0.048 13.3 0.0 2.2 2 0 0 2 2 2 1 MarR family LexA_DNA_bind PF01726.11 gi|518651951|ref|YP_008141471.1| - 0.069 12.7 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_11 PF08279.7 gi|518651951|ref|YP_008141471.1| - 0.074 12.7 0.1 0.14 11.8 0.1 1.5 1 0 0 1 1 1 0 HTH domain HTH_27 PF13463.1 gi|518651951|ref|YP_008141471.1| - 0.13 12.5 0.0 0.45 10.8 0.0 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain DDE_Tnp_IS66 PF03050.9 gi|518651952|ref|YP_008141472.1| - 0.071 12.3 0.0 0.071 12.3 0.0 1.0 1 0 0 1 1 1 0 Transposase IS66 family mTERF PF02536.9 gi|518651952|ref|YP_008141472.1| - 0.1 11.1 0.1 0.099 11.2 0.1 1.0 1 0 0 1 1 1 0 mTERF VID27 PF08553.5 gi|518651954|ref|YP_008141474.1| - 0.088 11.0 0.0 0.088 11.0 0.0 1.0 1 0 0 1 1 1 0 VID27 cytoplasmic protein Sugar_tr PF00083.19 gi|518651955|ref|YP_008141475.1| - 2.5e-41 141.7 31.0 3.1e-41 141.4 21.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518651955|ref|YP_008141475.1| - 4e-26 91.5 81.6 1.4e-22 79.8 31.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Amidohydro_1 PF01979.15 gi|518651956|ref|YP_008141476.1| - 7.3e-17 62.0 0.3 1.5e-16 61.0 0.2 1.5 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|518651956|ref|YP_008141476.1| - 2.8e-16 60.3 0.0 4.1e-16 59.8 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|518651956|ref|YP_008141476.1| - 5.3e-10 38.9 0.4 1.5e-09 37.5 0.1 1.9 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|518651956|ref|YP_008141476.1| - 6.5e-06 25.6 0.0 0.01 15.0 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family NIPSNAP PF07978.8 gi|518651956|ref|YP_008141476.1| - 0.082 12.8 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NIPSNAP TPP_enzyme_N PF02776.13 gi|518651957|ref|YP_008141477.1| - 4.3e-29 101.2 0.0 1e-28 99.9 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518651957|ref|YP_008141477.1| - 5.6e-22 77.9 0.0 1.8e-21 76.2 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|518651957|ref|YP_008141477.1| - 1.5e-13 50.6 0.0 2.7e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|518651957|ref|YP_008141477.1| - 0.022 14.3 0.0 0.62 9.5 0.0 2.6 2 0 0 2 2 2 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Adhesin_P1 PF03257.8 gi|518651958|ref|YP_008141478.1| - 0.13 12.5 0.1 0.21 11.9 0.1 1.2 1 0 0 1 1 1 0 Mycoplasma adhesin P1 Lar_restr_allev PF14354.1 gi|518651959|ref|YP_008141479.1| - 0.11 12.8 3.3 0.22 11.8 2.3 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar DUF3449 PF11931.3 gi|518651959|ref|YP_008141479.1| - 0.38 10.2 6.7 5.5 6.4 1.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3449) Rubredoxin PF00301.15 gi|518651959|ref|YP_008141479.1| - 1.2 9.0 4.5 2.6 7.9 3.1 1.5 1 0 0 1 1 1 0 Rubredoxin HxlR PF01638.12 gi|518651961|ref|YP_008141481.1| - 0.0039 16.8 0.1 0.0066 16.0 0.1 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TFIIE_alpha PF02002.12 gi|518651961|ref|YP_008141481.1| - 0.091 12.2 2.3 0.17 11.3 0.2 2.3 2 1 0 2 2 2 0 TFIIE alpha subunit Phage_integrase PF00589.17 gi|518651963|ref|YP_008141483.1| - 9.6e-32 110.0 0.6 1.5e-31 109.3 0.4 1.3 1 0 0 1 1 1 1 Phage integrase family PMT_C PF11647.3 gi|518651963|ref|YP_008141483.1| - 0.12 12.0 0.0 0.33 10.5 0.0 1.8 1 0 0 1 1 1 0 C-terminal region of Pasteurella multocida toxin residues 569-1285 zinc_ribbon_4 PF13717.1 gi|518651965|ref|YP_008141485.1| - 0.00019 21.0 0.9 0.083 12.5 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|518651965|ref|YP_008141485.1| - 0.00028 20.3 1.3 0.096 12.2 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|518651965|ref|YP_008141485.1| - 0.0019 17.3 1.8 0.41 9.9 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|518651965|ref|YP_008141485.1| - 0.0022 18.2 3.5 0.62 10.4 0.2 2.2 2 0 0 2 2 2 2 Zinc-finger double domain CpXC PF14353.1 gi|518651965|ref|YP_008141485.1| - 0.0036 17.2 1.3 0.14 12.1 0.1 2.0 2 0 0 2 2 2 1 CpXC protein zf-Di19 PF05605.7 gi|518651965|ref|YP_008141485.1| - 0.0059 16.7 1.8 1.1 9.3 0.2 2.1 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding Zn_ribbon_recom PF13408.1 gi|518651965|ref|YP_008141485.1| - 0.01 16.0 0.2 1.2 9.5 0.0 2.1 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain Cys_rich_KTR PF14205.1 gi|518651965|ref|YP_008141485.1| - 0.011 15.1 0.9 0.75 9.2 0.0 2.1 2 0 0 2 2 2 0 Cysteine-rich KTR zf-RING_3 PF14369.1 gi|518651965|ref|YP_008141485.1| - 0.013 15.4 0.6 0.99 9.4 0.0 2.3 2 0 0 2 2 2 0 zinc-finger OrfB_Zn_ribbon PF07282.6 gi|518651965|ref|YP_008141485.1| - 0.016 14.8 0.1 3.4 7.3 0.0 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-C2HC_2 PF13913.1 gi|518651965|ref|YP_008141485.1| - 0.017 14.7 4.0 0.54 9.9 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF2225 PF09986.4 gi|518651965|ref|YP_008141485.1| - 0.022 14.2 4.4 3.6 7.0 3.1 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) Zn_Tnp_IS1 PF03811.8 gi|518651965|ref|YP_008141485.1| - 0.023 14.1 1.2 3.9 7.0 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain zf-Mss51 PF13824.1 gi|518651965|ref|YP_008141485.1| - 0.028 14.2 0.6 0.055 13.3 0.4 1.5 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 FYDLN_acid PF09538.5 gi|518651965|ref|YP_008141485.1| - 0.032 14.8 0.3 0.71 10.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Lar_restr_allev PF14354.1 gi|518651965|ref|YP_008141485.1| - 0.044 14.0 1.3 0.21 11.9 0.9 1.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar PhnA_Zn_Ribbon PF08274.7 gi|518651965|ref|YP_008141485.1| - 0.048 13.4 1.5 0.52 10.1 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DZR PF12773.2 gi|518651965|ref|YP_008141485.1| - 0.048 13.4 2.1 0.32 10.8 1.5 1.9 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|518651965|ref|YP_008141485.1| - 0.049 12.9 0.6 4.3 6.7 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-BED PF02892.10 gi|518651965|ref|YP_008141485.1| - 0.049 13.3 0.4 1.4 8.7 0.0 2.1 2 0 0 2 2 2 0 BED zinc finger zf-RING_4 PF14570.1 gi|518651965|ref|YP_008141485.1| - 0.057 13.0 1.0 2 8.0 0.1 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Zn-ribbon_8 PF09723.5 gi|518651965|ref|YP_008141485.1| - 0.068 13.1 1.4 2.4 8.1 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DUF329 PF03884.9 gi|518651965|ref|YP_008141485.1| - 0.073 12.6 0.9 8.4 6.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF329) zf-C2H2_4 PF13894.1 gi|518651965|ref|YP_008141485.1| - 0.084 13.2 1.0 10 6.7 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger zinc_ribbon_2 PF13240.1 gi|518651965|ref|YP_008141485.1| - 0.086 12.3 3.7 4.6 6.8 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|518651965|ref|YP_008141485.1| - 0.088 12.6 0.5 4.7 7.0 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.2 gi|518651965|ref|YP_008141485.1| - 0.096 12.5 6.3 1.7 8.5 0.4 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain SoxD PF04267.7 gi|518651965|ref|YP_008141485.1| - 0.1 12.4 1.0 0.28 11.0 0.1 1.9 2 0 0 2 2 2 0 Sarcosine oxidase, delta subunit family DUF555 PF04475.7 gi|518651965|ref|YP_008141485.1| - 0.1 12.5 0.4 13 5.9 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF555) HypA PF01155.14 gi|518651965|ref|YP_008141485.1| - 0.12 12.1 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-C2H2 PF00096.21 gi|518651965|ref|YP_008141485.1| - 0.12 12.7 2.5 5.4 7.5 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C3HC4_3 PF13920.1 gi|518651965|ref|YP_008141485.1| - 0.13 11.9 1.6 6.6 6.4 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-TFIIB PF13453.1 gi|518651965|ref|YP_008141485.1| - 0.18 11.0 0.7 3.7 6.8 0.1 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger Cys_rich_CPXG PF14255.1 gi|518651965|ref|YP_008141485.1| - 0.2 11.5 1.9 2.5 7.9 0.1 2.2 2 0 0 2 2 2 0 Cysteine-rich CPXCG TFIIS_C PF01096.13 gi|518651965|ref|YP_008141485.1| - 0.44 10.2 2.6 11 5.7 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Ogr_Delta PF04606.7 gi|518651965|ref|YP_008141485.1| - 0.48 10.1 2.3 2.1 8.0 0.1 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DUF2387 PF09526.5 gi|518651965|ref|YP_008141485.1| - 0.91 9.4 3.7 5.2 7.0 2.6 1.9 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Rubredoxin PF00301.15 gi|518651965|ref|YP_008141485.1| - 8.6 6.3 7.6 19 5.2 0.5 2.4 1 1 1 2 2 2 0 Rubredoxin PIN PF01850.16 gi|518651966|ref|YP_008141486.1| - 1.9e-14 54.0 4.1 2.5e-14 53.6 2.9 1.1 1 0 0 1 1 1 1 PIN domain TFIIA_gamma_N PF02268.11 gi|518651966|ref|YP_008141486.1| - 2.9 7.5 4.9 1.4 8.5 0.1 2.8 3 1 0 3 3 3 0 Transcription initiation factor IIA, gamma subunit, helical domain DUF4518 PF15008.1 gi|518651967|ref|YP_008141487.1| - 0.00028 19.9 0.2 0.00029 19.9 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4518) RHH_1 PF01402.16 gi|518651967|ref|YP_008141487.1| - 0.012 15.4 0.2 0.043 13.7 0.0 2.0 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family YolD PF08863.5 gi|518651967|ref|YP_008141487.1| - 0.13 12.0 1.3 0.16 11.8 0.9 1.1 1 0 0 1 1 1 0 YolD-like protein Evr1_Alr PF04777.8 gi|518651967|ref|YP_008141487.1| - 0.14 12.0 0.2 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 Erv1 / Alr family SDF PF00375.13 gi|518651968|ref|YP_008141488.1| - 0.19 10.4 4.3 0.19 10.4 3.0 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family Na_H_Exchanger PF00999.16 gi|518651969|ref|YP_008141489.1| - 1e-30 106.5 54.8 1.4e-30 106.1 38.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.23 gi|518651969|ref|YP_008141489.1| - 3.1e-08 33.2 0.0 5.8e-05 22.7 0.0 2.6 2 0 0 2 2 2 2 CBS domain FmdA_AmdA PF03069.10 gi|518651970|ref|YP_008141490.1| - 8.8e-50 169.4 0.9 1.7e-26 92.8 0.1 2.9 1 1 1 2 2 2 2 Acetamidase/Formamidase family AMNp_N PF10423.4 gi|518651970|ref|YP_008141490.1| - 0.18 11.3 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus DNA_ligase_A_M PF01068.16 gi|518651971|ref|YP_008141491.1| - 4.5e-54 182.8 0.5 7e-54 182.2 0.3 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|518651971|ref|YP_008141491.1| - 5.3e-44 150.1 0.2 9.1e-44 149.3 0.1 1.4 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|518651971|ref|YP_008141491.1| - 7.2e-22 77.6 0.0 2e-21 76.2 0.0 1.8 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region mRNA_cap_enzyme PF01331.14 gi|518651971|ref|YP_008141491.1| - 0.0026 17.5 0.2 0.023 14.3 0.0 2.2 2 0 0 2 2 2 1 mRNA capping enzyme, catalytic domain Nab2 PF11517.3 gi|518651971|ref|YP_008141491.1| - 0.075 13.1 0.0 2.9 8.0 0.0 2.7 1 1 1 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) tRNA_anti-codon PF01336.20 gi|518651972|ref|YP_008141492.1| - 1.3e-05 24.9 0.1 2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DEAD_2 PF06733.10 gi|518651974|ref|YP_008141494.1| - 3.1e-23 82.0 0.6 6.4e-23 81.0 0.4 1.5 1 0 0 1 1 1 1 DEAD_2 Helicase_C_2 PF13307.1 gi|518651974|ref|YP_008141494.1| - 6.7e-20 71.6 0.0 2.6e-19 69.7 0.0 1.9 2 0 0 2 2 2 1 Helicase C-terminal domain ResIII PF04851.10 gi|518651974|ref|YP_008141494.1| - 3.3e-06 27.0 1.8 7e-06 26.0 0.1 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|518651974|ref|YP_008141494.1| - 1.4e-05 24.6 0.0 0.026 14.0 0.0 3.3 4 0 0 4 4 4 2 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|518651974|ref|YP_008141494.1| - 0.014 15.4 0.5 14 5.8 0.1 3.3 2 1 0 2 2 2 0 AAA domain DUF947 PF06102.7 gi|518651974|ref|YP_008141494.1| - 1.4 8.7 6.2 7.8 6.2 0.5 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF947) MFS_1 PF07690.11 gi|518651975|ref|YP_008141495.1| - 3.4e-24 85.2 53.7 7.6e-14 51.1 15.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Gly-zipper_Omp PF13488.1 gi|518651975|ref|YP_008141495.1| - 0.95 9.1 4.9 3.2 7.4 0.4 2.3 2 0 0 2 2 2 0 Glycine zipper Glycos_transf_2 PF00535.21 gi|518651976|ref|YP_008141496.1| - 2.2e-23 82.7 0.2 2.9e-23 82.3 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518651976|ref|YP_008141496.1| - 1.1e-11 44.9 0.0 1.3e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|518651976|ref|YP_008141496.1| - 9.8e-05 21.5 0.2 0.00015 21.0 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|518651976|ref|YP_008141496.1| - 0.017 15.3 0.0 0.047 13.9 0.0 1.7 1 1 1 2 2 2 0 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.1 gi|518651976|ref|YP_008141496.1| - 0.12 12.0 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 RNase_HII PF01351.13 gi|518651977|ref|YP_008141497.1| - 1.4e-42 145.6 0.0 1.7e-42 145.3 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease HII Acetyltransf_3 PF13302.1 gi|518651978|ref|YP_008141498.1| - 8.3e-19 68.1 0.0 9.9e-19 67.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|518651978|ref|YP_008141498.1| - 1.5e-13 50.9 0.4 1.9e-13 50.6 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518651978|ref|YP_008141498.1| - 1.4e-06 28.2 0.0 2.4e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 gi|518651978|ref|YP_008141498.1| - 7.8e-05 22.5 0.0 8.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|518651978|ref|YP_008141498.1| - 0.0009 19.3 0.1 0.0015 18.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Radical_SAM PF04055.16 gi|518651979|ref|YP_008141499.1| - 1.1e-10 41.9 0.0 5.2e-10 39.7 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily PhoU_div PF01865.11 gi|518651980|ref|YP_008141500.1| - 9.9e-13 47.7 9.3 1.6e-12 47.0 6.4 1.3 1 1 0 1 1 1 1 Protein of unknown function DUF47 DUF2408 PF10303.4 gi|518651980|ref|YP_008141500.1| - 0.004 17.2 3.1 0.72 9.9 0.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF2408) NPV_P10 PF05531.7 gi|518651980|ref|YP_008141500.1| - 0.11 12.7 0.3 0.11 12.7 0.2 2.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein PHO4 PF01384.15 gi|518651981|ref|YP_008141501.1| - 2.2e-29 102.1 28.4 4.9e-29 101.0 19.7 1.6 1 1 0 1 1 1 1 Phosphate transporter family SPC25 PF06703.6 gi|518651981|ref|YP_008141501.1| - 0.11 12.0 0.3 0.23 11.0 0.2 1.5 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) adh_short PF00106.20 gi|518651982|ref|YP_008141502.1| - 8.8e-32 110.3 0.2 1.1e-31 110.0 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518651982|ref|YP_008141502.1| - 1.5e-28 100.2 0.9 1.8e-28 99.9 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518651982|ref|YP_008141502.1| - 3.5e-10 39.8 0.2 4.8e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 KR domain Eno-Rase_NADH_b PF12242.3 gi|518651982|ref|YP_008141502.1| - 0.00019 21.1 0.0 0.00057 19.6 0.0 1.8 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Epimerase PF01370.16 gi|518651982|ref|YP_008141502.1| - 0.0015 18.0 0.2 0.005 16.3 0.2 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|518651982|ref|YP_008141502.1| - 0.073 11.7 0.3 0.15 10.7 0.1 1.7 2 0 0 2 2 2 0 3-beta hydroxysteroid dehydrogenase/isomerase family Wyosine_form PF08608.7 gi|518651983|ref|YP_008141503.1| - 3.2e-20 71.9 0.0 1.6e-19 69.7 0.0 2.0 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.16 gi|518651983|ref|YP_008141503.1| - 4.6e-14 52.9 0.2 2.5e-13 50.5 0.1 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|518651983|ref|YP_008141503.1| - 0.0058 16.6 0.4 0.017 15.1 0.3 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain ArsA_ATPase PF02374.10 gi|518651985|ref|YP_008141505.1| - 1.4e-86 290.3 0.0 1.6e-86 290.0 0.0 1.1 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.18 gi|518651985|ref|YP_008141505.1| - 1.4e-10 40.8 0.0 2.3e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|518651985|ref|YP_008141505.1| - 1.1e-07 31.9 0.2 1.1e-06 28.7 0.2 2.3 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|518651985|ref|YP_008141505.1| - 5.4e-05 22.7 0.3 0.00026 20.5 0.1 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.13 gi|518651985|ref|YP_008141505.1| - 0.0001 21.6 0.0 0.00018 20.8 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.1 gi|518651985|ref|YP_008141505.1| - 0.0023 17.5 0.0 0.0047 16.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|518651985|ref|YP_008141505.1| - 0.0037 17.4 0.0 0.0092 16.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|518651985|ref|YP_008141505.1| - 0.017 14.8 0.3 0.044 13.4 0.2 1.7 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.1 gi|518651985|ref|YP_008141505.1| - 0.026 13.9 0.5 0.065 12.6 0.1 1.8 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.4 gi|518651985|ref|YP_008141505.1| - 0.04 12.8 0.0 0.061 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.1 gi|518651985|ref|YP_008141505.1| - 0.042 13.8 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain APS_kinase PF01583.15 gi|518651985|ref|YP_008141505.1| - 0.048 13.3 0.1 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_30 PF13604.1 gi|518651985|ref|YP_008141505.1| - 0.05 13.1 0.5 0.089 12.3 0.3 1.5 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|518651985|ref|YP_008141505.1| - 0.072 12.7 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.1 gi|518651985|ref|YP_008141505.1| - 0.076 13.3 0.0 0.21 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|518651985|ref|YP_008141505.1| - 0.089 12.5 0.1 0.71 9.6 0.2 2.3 3 0 0 3 3 3 0 Part of AAA domain Mur_ligase_M PF08245.7 gi|518651985|ref|YP_008141505.1| - 0.093 12.7 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Mur ligase middle domain AAA_5 PF07728.9 gi|518651985|ref|YP_008141505.1| - 0.11 12.2 0.1 0.33 10.6 0.1 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_10 PF12846.2 gi|518651985|ref|YP_008141505.1| - 0.11 11.9 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain T2SE PF00437.15 gi|518651985|ref|YP_008141505.1| - 0.14 11.0 0.1 0.2 10.5 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein PhoH PF02562.11 gi|518651985|ref|YP_008141505.1| - 0.15 11.2 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein polyprenyl_synt PF00348.12 gi|518651986|ref|YP_008141506.1| - 3.1e-55 186.8 0.1 4.1e-55 186.4 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Alba PF01918.16 gi|518651987|ref|YP_008141507.1| - 6e-16 57.8 0.5 7.1e-16 57.5 0.4 1.1 1 0 0 1 1 1 1 Alba Rpp20 PF12328.3 gi|518651987|ref|YP_008141507.1| - 0.0064 16.1 0.1 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P HTH_24 PF13412.1 gi|518651988|ref|YP_008141508.1| - 1.6e-12 46.5 0.6 3e-12 45.7 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518651988|ref|YP_008141508.1| - 3.2e-12 45.7 0.0 5e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|518651988|ref|YP_008141508.1| - 4.4e-06 26.2 1.7 1e-05 25.0 0.2 2.2 3 0 0 3 3 3 1 HTH domain HTH_23 PF13384.1 gi|518651988|ref|YP_008141508.1| - 4.5e-05 22.9 0.0 9.1e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_DeoR PF08220.7 gi|518651988|ref|YP_008141508.1| - 0.00013 21.4 2.3 0.00014 21.2 0.1 2.1 3 0 0 3 3 2 1 DeoR-like helix-turn-helix domain HTH_5 PF01022.15 gi|518651988|ref|YP_008141508.1| - 0.0002 20.9 0.0 0.00035 20.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Stk19 PF10494.4 gi|518651988|ref|YP_008141508.1| - 0.00062 19.2 0.5 0.00068 19.1 0.4 1.1 1 0 0 1 1 1 1 Serine-threonine protein kinase 19 Sigma70_r4_2 PF08281.7 gi|518651988|ref|YP_008141508.1| - 0.0012 18.2 0.0 0.0033 16.8 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_27 PF13463.1 gi|518651988|ref|YP_008141508.1| - 0.0026 18.0 0.5 0.021 15.1 0.0 2.3 3 0 0 3 3 2 1 Winged helix DNA-binding domain GerE PF00196.14 gi|518651988|ref|YP_008141508.1| - 0.0027 16.9 1.3 0.0043 16.3 0.2 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_Mga PF08280.6 gi|518651988|ref|YP_008141508.1| - 0.0028 17.3 0.1 0.012 15.3 0.0 2.0 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_Tnp_ISL3 PF13542.1 gi|518651988|ref|YP_008141508.1| - 0.0036 16.4 0.0 0.007 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 TrmB PF01978.14 gi|518651988|ref|YP_008141508.1| - 0.0042 16.7 0.2 0.013 15.1 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.1 gi|518651988|ref|YP_008141508.1| - 0.0052 16.7 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|518651988|ref|YP_008141508.1| - 0.0063 16.1 0.1 0.011 15.4 0.1 1.5 1 1 0 1 1 1 1 AsnC family HTH_38 PF13936.1 gi|518651988|ref|YP_008141508.1| - 0.0073 15.8 0.1 0.014 14.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.11 gi|518651988|ref|YP_008141508.1| - 0.011 15.0 0.1 0.022 14.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 TFIIE_alpha PF02002.12 gi|518651988|ref|YP_008141508.1| - 0.012 15.0 0.5 0.025 14.0 0.1 1.7 2 0 0 2 2 2 0 TFIIE alpha subunit HrcA_DNA-bdg PF03444.10 gi|518651988|ref|YP_008141508.1| - 0.016 14.6 0.8 0.14 11.6 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Phage_terminase PF10668.4 gi|518651988|ref|YP_008141508.1| - 0.02 14.6 0.2 0.074 12.8 0.0 1.9 2 0 0 2 2 2 0 Phage terminase small subunit MarR PF01047.17 gi|518651988|ref|YP_008141508.1| - 0.021 14.5 0.1 0.04 13.6 0.1 1.5 1 0 0 1 1 1 0 MarR family Mga PF05043.8 gi|518651988|ref|YP_008141508.1| - 0.029 14.6 0.3 0.08 13.2 0.0 1.8 1 1 0 2 2 2 0 Mga helix-turn-helix domain HTH_IclR PF09339.5 gi|518651988|ref|YP_008141508.1| - 0.037 13.6 0.0 0.065 12.8 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|518651988|ref|YP_008141508.1| - 0.046 13.5 0.0 0.27 11.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.2 gi|518651988|ref|YP_008141508.1| - 0.056 13.7 0.0 0.34 11.1 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain NUMOD1 PF07453.8 gi|518651988|ref|YP_008141508.1| - 0.056 13.3 0.1 0.31 10.9 0.0 2.3 2 0 0 2 2 2 0 NUMOD1 domain HTH_29 PF13551.1 gi|518651988|ref|YP_008141508.1| - 0.061 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Phage_NinH PF06322.6 gi|518651988|ref|YP_008141508.1| - 0.069 12.7 0.2 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 Phage NinH protein MarR_2 PF12802.2 gi|518651988|ref|YP_008141508.1| - 0.071 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_9 PF08221.6 gi|518651988|ref|YP_008141508.1| - 0.071 12.9 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF977 PF06163.6 gi|518651988|ref|YP_008141508.1| - 0.075 12.7 0.1 0.15 11.8 0.1 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF977) FaeA PF04703.7 gi|518651988|ref|YP_008141508.1| - 0.1 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein GntR PF00392.16 gi|518651988|ref|YP_008141508.1| - 0.1 12.0 0.0 0.28 10.6 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Rrf2 PF02082.15 gi|518651988|ref|YP_008141508.1| - 0.11 12.6 0.1 0.26 11.4 0.0 1.7 2 1 0 2 2 2 0 Transcriptional regulator Ndr PF03096.9 gi|518651988|ref|YP_008141508.1| - 0.11 10.9 0.0 0.13 10.7 0.0 1.1 1 0 0 1 1 1 0 Ndr family RPA_C PF08784.6 gi|518651988|ref|YP_008141508.1| - 0.12 12.7 0.0 0.28 11.6 0.0 1.6 1 0 0 1 1 1 0 Replication protein A C terminal DUF3043 PF11241.3 gi|518651989|ref|YP_008141509.1| - 0.025 14.1 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) EamA PF00892.15 gi|518651990|ref|YP_008141510.1| - 3.3e-21 75.6 37.3 2e-17 63.3 14.4 2.4 3 0 0 3 3 3 2 EamA-like transporter family EmrE PF13536.1 gi|518651990|ref|YP_008141510.1| - 0.0028 17.8 25.0 0.077 13.1 0.3 3.1 1 1 2 3 3 3 2 Multidrug resistance efflux transporter Radical_SAM PF04055.16 gi|518651991|ref|YP_008141511.1| - 9.8e-11 42.1 0.0 1.9e-10 41.1 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 gi|518651991|ref|YP_008141511.1| - 5.2e-07 29.5 0.0 1.1e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain DUF1450 PF07293.6 gi|518651991|ref|YP_008141511.1| - 0.023 14.6 0.5 0.11 12.5 0.1 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1450) Keratin_assoc PF09775.4 gi|518651991|ref|YP_008141511.1| - 0.051 13.1 0.0 4.7 6.7 0.0 2.4 2 0 0 2 2 2 0 Keratinocyte-associated protein 2 OTCace PF00185.19 gi|518651992|ref|YP_008141512.1| - 2.5e-49 167.1 0.0 8.6e-49 165.4 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|518651992|ref|YP_008141512.1| - 1.4e-40 138.1 0.1 2.4e-40 137.4 0.1 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Pyr_redox_2 PF07992.9 gi|518651993|ref|YP_008141513.1| - 2.9e-30 105.6 4.0 3.5e-30 105.4 2.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518651993|ref|YP_008141513.1| - 1.5e-16 61.1 0.6 5.2e-11 42.9 0.0 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|518651993|ref|YP_008141513.1| - 4.7e-13 48.7 7.7 7.8e-07 28.3 0.7 3.2 3 0 0 3 3 3 3 FAD dependent oxidoreductase Pyr_redox PF00070.22 gi|518651993|ref|YP_008141513.1| - 1.5e-11 44.5 4.9 2.4e-08 34.2 0.1 3.0 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|518651993|ref|YP_008141513.1| - 3.6e-10 39.2 10.5 4.7e-08 32.2 0.4 4.1 3 1 2 5 5 5 2 FAD binding domain Thi4 PF01946.12 gi|518651993|ref|YP_008141513.1| - 6.9e-09 35.1 1.3 3.8e-07 29.4 0.1 2.6 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.1 gi|518651993|ref|YP_008141513.1| - 4.1e-08 33.1 3.9 8.9e-07 28.8 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|518651993|ref|YP_008141513.1| - 5.7e-08 31.6 7.4 0.00049 18.6 0.3 3.2 3 0 0 3 3 3 3 HI0933-like protein FAD_oxidored PF12831.2 gi|518651993|ref|YP_008141513.1| - 1.7e-07 30.6 0.0 1.7e-07 30.6 0.0 2.1 2 1 1 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|518651993|ref|YP_008141513.1| - 8.8e-07 28.1 9.7 0.0011 17.9 1.0 3.3 2 1 0 3 3 3 3 Glucose inhibited division protein A Lycopene_cycl PF05834.7 gi|518651993|ref|YP_008141513.1| - 4.1e-06 25.9 3.3 0.054 12.3 0.2 2.9 2 1 1 3 3 3 2 Lycopene cyclase protein FAD_binding_3 PF01494.14 gi|518651993|ref|YP_008141513.1| - 4.3e-06 26.0 1.3 0.00045 19.3 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain IlvN PF07991.7 gi|518651993|ref|YP_008141513.1| - 2.2e-05 23.9 0.4 0.044 13.1 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, catalytic domain K_oxygenase PF13434.1 gi|518651993|ref|YP_008141513.1| - 3.8e-05 22.7 0.1 0.00033 19.6 0.0 2.2 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.1 gi|518651993|ref|YP_008141513.1| - 0.00027 21.1 0.3 0.028 14.6 0.0 2.4 2 1 0 2 2 2 1 Putative NAD(P)-binding Trp_halogenase PF04820.9 gi|518651993|ref|YP_008141513.1| - 0.0012 17.5 2.2 0.56 8.7 0.4 2.1 2 0 0 2 2 2 2 Tryptophan halogenase NAD_Gly3P_dh_N PF01210.18 gi|518651993|ref|YP_008141513.1| - 0.012 15.3 0.2 0.79 9.4 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Strep_67kDa_ant PF06100.6 gi|518651993|ref|YP_008141513.1| - 0.019 13.3 0.1 0.027 12.8 0.0 1.2 1 0 0 1 1 1 0 Streptococcal 67 kDa myosin-cross-reactive antigen like family ApbA PF02558.11 gi|518651993|ref|YP_008141513.1| - 0.024 14.1 2.9 3.8 6.9 0.0 2.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.14 gi|518651993|ref|YP_008141513.1| - 0.035 13.2 0.4 3.8 6.6 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|518651993|ref|YP_008141513.1| - 0.036 14.1 1.9 6 6.9 0.1 2.9 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase Amino_oxidase PF01593.19 gi|518651993|ref|YP_008141513.1| - 0.06 12.4 0.2 2.1 7.3 0.0 2.1 1 1 1 2 2 2 0 Flavin containing amine oxidoreductase TrkA_N PF02254.13 gi|518651993|ref|YP_008141513.1| - 1.2 9.1 5.0 16 5.5 0.1 3.2 4 1 0 4 4 4 0 TrkA-N domain NAD_binding_9 PF13454.1 gi|518651993|ref|YP_008141513.1| - 9.2 6.0 6.2 8.2 6.1 0.0 2.8 3 0 0 3 3 3 0 FAD-NAD(P)-binding Cpn60_TCP1 PF00118.19 gi|518651994|ref|YP_008141514.1| - 5e-169 562.9 20.2 5.7e-169 562.8 14.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family YwpF PF14183.1 gi|518651994|ref|YP_008141514.1| - 0.029 14.0 1.5 0.1 12.2 0.4 2.3 2 0 0 2 2 2 0 YwpF-like protein Thy1 PF02511.10 gi|518651995|ref|YP_008141515.1| - 1.6e-33 115.6 0.0 2.2e-21 76.1 0.0 2.2 2 0 0 2 2 2 2 Thymidylate synthase complementing protein 3Beta_HSD PF01073.14 gi|518651996|ref|YP_008141516.1| - 5.3e-16 58.1 0.3 8.9e-14 50.8 0.2 2.2 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 gi|518651996|ref|YP_008141516.1| - 2.6e-13 50.4 0.0 3.5e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|518651996|ref|YP_008141516.1| - 1.7e-09 37.4 0.1 2.9e-08 33.4 0.1 2.1 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518651996|ref|YP_008141516.1| - 4e-07 29.1 0.0 7.7e-05 21.7 0.0 2.2 1 1 0 1 1 1 1 RmlD substrate binding domain TrkA_N PF02254.13 gi|518651996|ref|YP_008141516.1| - 0.015 15.2 0.2 0.029 14.3 0.2 1.4 1 0 0 1 1 1 0 TrkA-N domain DapB_N PF01113.15 gi|518651996|ref|YP_008141516.1| - 0.026 14.4 0.2 0.043 13.7 0.1 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DUF1940 PF09155.5 gi|518651997|ref|YP_008141517.1| - 4e-41 140.2 0.5 4.5e-41 140.0 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1940) Chorismate_synt PF01264.16 gi|518651998|ref|YP_008141518.1| - 1.3e-119 398.7 0.0 1.5e-119 398.5 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase BCIP PF13862.1 gi|518651998|ref|YP_008141518.1| - 0.12 11.8 0.0 0.49 9.8 0.0 1.8 1 1 0 1 1 1 0 p21-C-terminal region-binding protein DUF2070 PF09843.4 gi|518651999|ref|YP_008141519.1| - 7.3e-28 97.2 1.3 7.3e-28 97.2 0.9 1.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2070) NAD_kinase PF01513.16 gi|518652000|ref|YP_008141520.1| - 3.9e-38 130.8 0.2 4.3e-38 130.7 0.1 1.0 1 0 0 1 1 1 1 ATP-NAD kinase Hydrolase_3 PF08282.7 gi|518652001|ref|YP_008141521.1| - 1.1e-12 48.0 1.0 3.6e-09 36.5 0.0 2.9 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|518652001|ref|YP_008141521.1| - 4e-08 33.6 0.1 5.4e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|518652001|ref|YP_008141521.1| - 1.2e-06 29.1 0.0 0.0042 17.5 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|518652001|ref|YP_008141521.1| - 0.00086 19.5 0.0 0.061 13.5 0.0 2.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|518652001|ref|YP_008141521.1| - 0.078 12.8 0.1 0.41 10.5 0.1 2.3 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF92 PF01940.11 gi|518652002|ref|YP_008141522.1| - 3.1e-58 196.5 15.5 3.7e-58 196.3 10.8 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF92 OppC_N PF12911.2 gi|518652002|ref|YP_008141522.1| - 0.0056 16.0 0.1 0.0056 16.0 0.1 4.0 5 1 1 6 6 6 1 N-terminal TM domain of oligopeptide transport permease C Ndc1_Nup PF09531.5 gi|518652002|ref|YP_008141522.1| - 0.16 10.4 1.5 0.21 9.9 1.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4191 PF13829.1 gi|518652002|ref|YP_008141522.1| - 0.19 10.7 6.5 0.052 12.6 1.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DrsE PF02635.10 gi|518652003|ref|YP_008141523.1| - 4.6e-13 49.3 0.0 5.4e-13 49.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.1 gi|518652003|ref|YP_008141523.1| - 2.4e-05 24.1 0.1 3.5e-05 23.6 0.1 1.3 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DUF1307 PF06998.6 gi|518652003|ref|YP_008141523.1| - 0.11 12.5 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) DUF2862 PF11061.3 gi|518652004|ref|YP_008141524.1| - 0.071 12.8 0.0 0.099 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) FAM75 PF14650.1 gi|518652005|ref|YP_008141525.1| - 0.095 12.0 0.1 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 FAM75 family Transposase_mut PF00872.13 gi|518652005|ref|YP_008141525.1| - 0.12 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Transposase, Mutator family Flagellin_D3 PF08884.6 gi|518652006|ref|YP_008141526.1| - 0.082 13.0 0.1 0.17 12.0 0.1 1.6 1 0 0 1 1 1 0 Flagellin D3 domain Amnionless PF14828.1 gi|518652006|ref|YP_008141526.1| - 0.52 8.7 2.0 0.6 8.5 0.8 1.6 1 1 0 1 1 1 0 Amnionless DUF4234 PF14018.1 gi|518652006|ref|YP_008141526.1| - 0.56 9.9 3.8 0.97 9.2 0.8 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4234) ODV-E18 PF10717.4 gi|518652006|ref|YP_008141526.1| - 0.7 9.3 4.3 0.99 8.8 1.9 2.0 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Mtp PF03821.11 gi|518652006|ref|YP_008141526.1| - 1 8.7 7.6 5.4 6.3 5.6 1.8 1 1 1 2 2 2 0 Golgi 4-transmembrane spanning transporter SUR7 PF06687.7 gi|518652006|ref|YP_008141526.1| - 1.6 8.2 10.6 3 7.3 7.3 1.6 1 1 0 1 1 1 0 SUR7/PalI family DUF3040 PF11239.3 gi|518652006|ref|YP_008141526.1| - 1.7 8.7 4.9 2.9 8.0 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) DUF3753 PF12575.3 gi|518652006|ref|YP_008141526.1| - 2.6 7.9 10.7 3.3 7.5 2.6 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3753) FtsX PF02687.16 gi|518652006|ref|YP_008141526.1| - 4.1 7.2 19.8 0.87 9.3 9.4 2.1 2 0 0 2 2 2 0 FtsX-like permease family DNA_binding_1 PF01035.15 gi|518652007|ref|YP_008141527.1| - 9.7e-30 102.1 0.0 2.3e-29 100.9 0.0 1.6 2 0 0 2 2 2 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.10 gi|518652007|ref|YP_008141527.1| - 3.6e-05 24.2 0.0 6.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OrfB_Zn_ribbon PF07282.6 gi|518652008|ref|YP_008141528.1| - 1.6e-22 78.8 0.1 3.1e-22 77.9 0.1 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518652008|ref|YP_008141528.1| - 1.4e-11 44.2 0.2 2.1e-11 43.6 0.1 1.3 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.7 gi|518652008|ref|YP_008141528.1| - 0.079 12.3 1.2 0.12 11.7 0.2 1.7 2 0 0 2 2 2 0 TFIIB zinc-binding ETF_alpha PF00766.14 gi|518652009|ref|YP_008141529.1| - 5.9e-31 105.9 0.1 1.2e-30 104.9 0.1 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.16 gi|518652009|ref|YP_008141529.1| - 3.6e-08 33.2 0.0 5.3e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF PF01012.16 gi|518652010|ref|YP_008141530.1| - 1.6e-29 102.7 0.2 2.1e-29 102.3 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain NurA PF09376.5 gi|518652011|ref|YP_008141531.1| - 0.095 12.1 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 NurA domain Spc42p PF11544.3 gi|518652011|ref|YP_008141531.1| - 0.12 12.2 2.1 0.15 12.0 0.6 1.7 2 0 0 2 2 2 0 Spindle pole body component Spc42p Ribonuc_red_lgC PF02867.10 gi|518652012|ref|YP_008141532.1| - 6.7e-151 503.5 0.0 7.3e-63 212.9 0.1 3.5 2 1 1 3 3 3 3 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.16 gi|518652012|ref|YP_008141532.1| - 1.4e-28 98.4 0.0 3.5e-28 97.2 0.0 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain LAGLIDADG_3 PF14528.1 gi|518652012|ref|YP_008141532.1| - 3.7e-22 78.3 0.3 3.2e-20 72.1 0.1 3.3 2 0 0 2 2 2 1 LAGLIDADG-like domain ATP-cone PF03477.11 gi|518652012|ref|YP_008141532.1| - 7.1e-22 77.6 4.1 1.2e-21 76.8 1.0 2.7 3 0 0 3 3 3 1 ATP cone domain Intein_splicing PF14890.1 gi|518652012|ref|YP_008141532.1| - 5e-14 51.9 0.6 5e-14 51.9 0.4 3.1 2 2 1 3 3 3 1 Intein splicing domain FTCD_C PF04961.7 gi|518652013|ref|YP_008141533.1| - 4.2e-43 146.9 0.3 5.1e-43 146.6 0.2 1.1 1 0 0 1 1 1 1 Formiminotransferase-cyclodeaminase Phage_fiber_C PF06820.7 gi|518652013|ref|YP_008141533.1| - 0.06 13.4 0.0 0.099 12.7 0.0 1.3 1 0 0 1 1 1 0 Putative prophage tail fibre C-terminus AKAP95 PF04988.7 gi|518652013|ref|YP_008141533.1| - 0.11 12.3 1.0 0.19 11.5 0.1 1.8 1 1 1 2 2 2 0 A-kinase anchoring protein 95 (AKAP95) Fib_alpha PF08702.5 gi|518652013|ref|YP_008141533.1| - 0.82 9.7 3.3 0.7 10.0 0.6 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FTHFS PF01268.14 gi|518652014|ref|YP_008141534.1| - 7e-216 717.5 4.7 7.8e-216 717.3 3.3 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase CbiA PF01656.18 gi|518652014|ref|YP_008141534.1| - 0.025 13.9 1.8 0.05 13.0 0.3 2.1 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain MFS_1 PF07690.11 gi|518652015|ref|YP_008141535.1| - 5e-28 97.8 45.1 5e-28 97.8 31.2 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652015|ref|YP_008141535.1| - 5.9e-24 84.4 47.3 2.3e-19 69.3 13.3 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter NTP_transf_2 PF01909.18 gi|518652016|ref|YP_008141536.1| - 0.00026 21.2 0.2 0.00037 20.7 0.1 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|518652016|ref|YP_008141536.1| - 0.056 13.0 0.0 0.066 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 HEPN PF05168.9 gi|518652017|ref|YP_008141537.1| - 1.2e-32 112.2 2.0 1.5e-32 111.9 1.4 1.0 1 0 0 1 1 1 1 HEPN domain Sec39 PF08314.6 gi|518652017|ref|YP_008141537.1| - 0.074 10.9 0.2 0.08 10.8 0.1 1.0 1 0 0 1 1 1 0 Secretory pathway protein Sec39 AAA_7 PF12775.2 gi|518652018|ref|YP_008141538.1| - 0.13 11.3 0.9 1.3 7.9 0.0 1.8 1 1 1 2 2 2 0 P-loop containing dynein motor region D3 ICAP-1_inte_bdg PF10480.4 gi|518652019|ref|YP_008141539.1| - 0.094 12.4 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Beta-1 integrin binding protein DUF35 PF01796.12 gi|518652020|ref|YP_008141540.1| - 4.7e-07 29.9 0.0 6.7e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain zinc_ribbon_2 PF13240.1 gi|518652020|ref|YP_008141540.1| - 0.00012 21.4 4.7 0.00021 20.6 3.2 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DUF35_N PF12172.3 gi|518652020|ref|YP_008141540.1| - 0.00071 19.4 0.5 0.0015 18.3 0.3 1.6 1 1 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.2 gi|518652020|ref|YP_008141540.1| - 0.001 18.8 0.7 0.0019 17.9 0.5 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652020|ref|YP_008141540.1| - 0.0017 17.5 4.0 0.0035 16.5 2.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain UPF0547 PF10571.4 gi|518652020|ref|YP_008141540.1| - 1.9 8.2 5.0 0.58 9.8 0.6 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Thiolase_C PF02803.13 gi|518652021|ref|YP_008141541.1| - 2.1e-06 27.1 0.0 4.9e-05 22.7 0.0 2.3 2 0 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|518652021|ref|YP_008141541.1| - 0.0024 16.9 0.7 0.014 14.4 0.0 2.3 2 1 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|518652021|ref|YP_008141541.1| - 0.0068 15.9 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 gi|518652021|ref|YP_008141541.1| - 0.024 14.2 0.1 5.5 6.7 0.0 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Acyl-CoA_dh_1 PF00441.19 gi|518652022|ref|YP_008141542.1| - 7.8e-42 142.9 0.1 1.1e-41 142.4 0.1 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|518652022|ref|YP_008141542.1| - 4e-32 111.1 0.0 7.9e-32 110.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.14 gi|518652022|ref|YP_008141542.1| - 2.1e-21 75.1 0.0 3.4e-21 74.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.6 gi|518652022|ref|YP_008141542.1| - 8e-15 55.2 0.0 1.2e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain NfeD PF01957.13 gi|518652024|ref|YP_008141544.1| - 3.5 7.7 9.3 0.29 11.2 0.3 2.1 2 0 0 2 2 2 0 NfeD-like C-terminal, partner-binding rve PF00665.21 gi|518652026|ref|YP_008141546.1| - 6.8e-22 77.8 0.0 1.7e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518652026|ref|YP_008141546.1| - 6.9e-06 25.5 2.0 0.00027 20.4 1.4 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518652026|ref|YP_008141546.1| - 3.9e-05 24.3 1.4 9.6e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|518652026|ref|YP_008141546.1| - 0.0071 15.9 0.2 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518652026|ref|YP_008141546.1| - 0.014 15.5 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|518652026|ref|YP_008141546.1| - 0.019 14.9 1.1 0.045 13.7 0.8 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652026|ref|YP_008141546.1| - 0.028 13.8 1.5 0.045 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Lactamase_B_2 PF12706.2 gi|518652027|ref|YP_008141547.1| - 4.2e-27 94.9 0.1 4.9e-27 94.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|518652027|ref|YP_008141547.1| - 7.1e-19 68.2 0.1 1e-18 67.7 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|518652027|ref|YP_008141547.1| - 8.9e-07 28.7 0.0 1.9e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.10 gi|518652027|ref|YP_008141547.1| - 0.026 13.4 2.3 0.31 9.9 0.4 2.5 2 1 1 3 3 3 0 cAMP phosphodiesterases class-II Sugar_tr PF00083.19 gi|518652028|ref|YP_008141548.1| - 2.8e-70 237.1 25.0 3.2e-70 236.9 17.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652028|ref|YP_008141548.1| - 6.2e-39 133.6 39.7 1.8e-32 112.4 21.5 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518652028|ref|YP_008141548.1| - 4.7e-06 25.2 26.2 0.00021 19.8 3.9 3.5 3 1 0 3 3 3 3 MFS/sugar transport protein MFS_3 PF05977.8 gi|518652028|ref|YP_008141548.1| - 0.07 11.2 6.0 0.014 13.5 0.9 1.9 2 0 0 2 2 2 0 Transmembrane secretion effector CytB6-F_Fe-S PF08802.5 gi|518652028|ref|YP_008141548.1| - 2.5 8.1 11.2 0.63 10.0 2.1 3.1 3 0 0 3 3 3 0 Cytochrome B6-F complex Fe-S subunit PALP PF00291.20 gi|518652029|ref|YP_008141549.1| - 2.1e-84 283.3 0.8 2.5e-84 283.1 0.5 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.1 gi|518652029|ref|YP_008141549.1| - 5.9e-05 23.3 0.1 0.0012 19.1 0.0 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 gi|518652029|ref|YP_008141549.1| - 0.00059 19.2 0.0 0.0013 18.1 0.0 1.6 1 0 0 1 1 1 1 ACT domain Acylphosphatase PF00708.13 gi|518652030|ref|YP_008141550.1| - 4.9e-21 74.6 0.0 5.4e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase HTH_10 PF04967.7 gi|518652031|ref|YP_008141551.1| - 3.1e-14 52.2 0.1 5.5e-14 51.4 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.11 gi|518652031|ref|YP_008141551.1| - 9.2e-07 28.0 0.3 1.6e-06 27.2 0.2 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 UPF0122 PF04297.9 gi|518652031|ref|YP_008141551.1| - 0.0013 18.7 0.7 0.0076 16.2 0.1 2.2 2 0 0 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like MarR_2 PF12802.2 gi|518652031|ref|YP_008141551.1| - 0.0029 17.2 0.0 0.0057 16.2 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|518652031|ref|YP_008141551.1| - 0.012 15.0 0.2 0.04 13.3 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|518652031|ref|YP_008141551.1| - 0.014 15.1 0.1 0.047 13.3 0.0 2.0 1 1 0 1 1 1 0 MarR family HTH_IclR PF09339.5 gi|518652031|ref|YP_008141551.1| - 0.017 14.7 0.1 0.31 10.6 0.0 2.2 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_22 PF13309.1 gi|518652031|ref|YP_008141551.1| - 0.025 14.3 0.0 0.049 13.3 0.0 1.6 1 0 0 1 1 1 0 HTH domain HTH_27 PF13463.1 gi|518652031|ref|YP_008141551.1| - 0.029 14.6 0.1 0.078 13.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_23 PF13384.1 gi|518652031|ref|YP_008141551.1| - 0.03 13.9 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_3 PF01381.17 gi|518652031|ref|YP_008141551.1| - 0.032 14.0 0.0 0.065 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_AraC PF00165.18 gi|518652031|ref|YP_008141551.1| - 0.043 13.6 0.1 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_37 PF13744.1 gi|518652031|ref|YP_008141551.1| - 0.045 13.5 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain RRM_1 PF00076.17 gi|518652031|ref|YP_008141551.1| - 0.046 13.3 0.1 0.9 9.2 0.0 2.5 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HTH_Mga PF08280.6 gi|518652031|ref|YP_008141551.1| - 0.056 13.1 0.3 0.38 10.5 0.1 2.5 1 1 1 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_26 PF13443.1 gi|518652031|ref|YP_008141551.1| - 0.069 13.3 0.0 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_5 PF01022.15 gi|518652031|ref|YP_008141551.1| - 0.092 12.4 0.0 0.24 11.0 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Sigma70_r3 PF04539.11 gi|518652031|ref|YP_008141551.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 Bac_Ubq_Cox PF01654.12 gi|518652032|ref|YP_008141552.1| - 5.9e-67 225.9 36.1 7.7e-67 225.5 25.0 1.0 1 0 0 1 1 1 1 Bacterial Cytochrome Ubiquinol Oxidase Cyto_ox_2 PF02322.10 gi|518652033|ref|YP_008141553.1| - 0.004 16.3 33.5 0.0078 15.4 23.2 1.4 1 1 0 1 1 1 1 Cytochrome oxidase subunit II DUF308 PF03729.8 gi|518652033|ref|YP_008141553.1| - 0.013 15.4 4.5 0.013 15.4 3.1 4.5 5 2 0 5 5 5 0 Short repeat of unknown function (DUF308) MMR_HSR1 PF01926.18 gi|518652034|ref|YP_008141554.1| - 2.2e-22 79.1 0.5 5.7e-22 77.8 0.3 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|518652034|ref|YP_008141554.1| - 3.7e-16 58.7 1.1 3.5e-15 55.6 0.1 2.2 2 0 0 2 2 2 1 Ferrous iron transport protein B TGS PF02824.16 gi|518652034|ref|YP_008141554.1| - 9.2e-15 54.2 0.0 2.3e-14 52.9 0.0 1.7 1 0 0 1 1 1 1 TGS domain Dynamin_N PF00350.18 gi|518652034|ref|YP_008141554.1| - 0.00068 19.4 5.6 0.19 11.4 0.1 3.0 2 1 1 3 3 3 2 Dynamin family Ras PF00071.17 gi|518652034|ref|YP_008141554.1| - 0.0027 17.1 0.2 1.8 7.9 0.0 2.4 2 0 0 2 2 2 2 Ras family AIG1 PF04548.11 gi|518652034|ref|YP_008141554.1| - 0.0039 16.3 1.3 0.0052 15.9 0.1 1.7 2 0 0 2 2 2 1 AIG1 family DUF258 PF03193.11 gi|518652034|ref|YP_008141554.1| - 0.0092 15.1 0.3 0.02 14.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Miro PF08477.8 gi|518652034|ref|YP_008141554.1| - 0.01 16.2 0.0 0.04 14.4 0.0 2.0 2 0 0 2 2 2 0 Miro-like protein ArgK PF03308.11 gi|518652034|ref|YP_008141554.1| - 0.043 12.5 0.6 1.3 7.6 0.0 2.5 2 0 0 2 2 2 0 ArgK protein Vac_ImportDeg PF09783.4 gi|518652034|ref|YP_008141554.1| - 0.057 12.9 0.0 0.09 12.2 0.0 1.3 1 0 0 1 1 1 0 Vacuolar import and degradation protein SRPRB PF09439.5 gi|518652034|ref|YP_008141554.1| - 0.1 11.7 0.0 0.1 11.7 0.0 1.7 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit ABC_tran PF00005.22 gi|518652034|ref|YP_008141554.1| - 0.26 11.5 2.6 0.42 10.9 0.1 2.5 3 0 0 3 3 3 0 ABC transporter MTS PF05175.9 gi|518652035|ref|YP_008141555.1| - 2e-22 79.3 0.0 2.5e-22 79.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|518652035|ref|YP_008141555.1| - 9.4e-15 54.6 0.0 1.2e-14 54.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518652035|ref|YP_008141555.1| - 5.8e-13 48.6 0.0 7.8e-13 48.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652035|ref|YP_008141555.1| - 1.3e-12 48.2 0.0 2.2e-12 47.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652035|ref|YP_008141555.1| - 1.5e-10 41.0 0.0 5.3e-10 39.2 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|518652035|ref|YP_008141555.1| - 8.4e-09 34.9 0.1 1.2e-08 34.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|518652035|ref|YP_008141555.1| - 2.2e-07 30.6 0.0 3.3e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_16 PF10294.4 gi|518652035|ref|YP_008141555.1| - 2.6e-07 30.2 0.0 2.3e-06 27.2 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_12 PF08242.7 gi|518652035|ref|YP_008141555.1| - 2.9e-06 27.6 0.0 1.9e-05 25.0 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518652035|ref|YP_008141555.1| - 4.1e-06 27.1 0.0 3.8e-05 24.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518652035|ref|YP_008141555.1| - 5.6e-06 26.6 0.0 1e-05 25.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|518652035|ref|YP_008141555.1| - 1.4e-05 24.6 0.0 2.4e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.11 gi|518652035|ref|YP_008141555.1| - 2.7e-05 23.2 0.0 3.6e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase UPF0020 PF01170.13 gi|518652035|ref|YP_008141555.1| - 2.8e-05 23.7 0.0 4.2e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 TehB PF03848.9 gi|518652035|ref|YP_008141555.1| - 4.1e-05 22.8 0.0 7e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Cons_hypoth95 PF03602.10 gi|518652035|ref|YP_008141555.1| - 0.00018 20.9 0.0 0.00026 20.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 RrnaAD PF00398.15 gi|518652035|ref|YP_008141555.1| - 0.00033 19.7 0.0 0.00038 19.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DUF43 PF01861.11 gi|518652035|ref|YP_008141555.1| - 0.0019 17.2 0.0 0.0051 15.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function DUF43 TPMT PF05724.6 gi|518652035|ref|YP_008141555.1| - 0.0031 16.9 0.0 0.0052 16.2 0.0 1.4 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) tRNA_U5-meth_tr PF05958.6 gi|518652035|ref|YP_008141555.1| - 0.02 13.6 0.1 0.029 13.0 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase NodS PF05401.6 gi|518652035|ref|YP_008141555.1| - 0.027 13.8 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF2431 PF10354.4 gi|518652035|ref|YP_008141555.1| - 0.035 14.0 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2431) CMAS PF02353.15 gi|518652035|ref|YP_008141555.1| - 0.053 12.5 0.0 0.087 11.8 0.0 1.4 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase MethyltransfD12 PF02086.10 gi|518652035|ref|YP_008141555.1| - 0.055 12.9 0.3 0.27 10.6 0.0 2.1 2 1 1 3 3 3 0 D12 class N6 adenine-specific DNA methyltransferase Eco57I PF07669.6 gi|518652035|ref|YP_008141555.1| - 0.1 12.9 0.1 1.4 9.3 0.0 2.1 1 1 1 2 2 2 0 Eco57I restriction-modification methylase UDPG_MGDP_dh_N PF03721.9 gi|518652035|ref|YP_008141555.1| - 0.15 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AAA_23 PF13476.1 gi|518652036|ref|YP_008141556.1| - 2.1e-22 80.4 31.2 2.1e-22 80.4 21.6 5.7 1 1 2 3 3 1 1 AAA domain AAA_13 PF13166.1 gi|518652036|ref|YP_008141556.1| - 8.4e-09 34.4 86.9 3.3e-06 25.9 12.2 4.9 1 1 3 5 5 5 3 AAA domain Rad50_zn_hook PF04423.9 gi|518652036|ref|YP_008141556.1| - 4.6e-08 32.4 0.1 4.6e-08 32.4 0.1 7.1 8 1 1 9 9 9 1 Rad50 zinc hook motif AAA_29 PF13555.1 gi|518652036|ref|YP_008141556.1| - 5.9e-08 32.1 0.0 1.3e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|518652036|ref|YP_008141556.1| - 1.5e-06 27.5 59.0 3.4e-05 23.1 40.9 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|518652036|ref|YP_008141556.1| - 7.8e-06 25.7 0.0 2.4e-05 24.1 0.0 1.8 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF4201 PF13870.1 gi|518652036|ref|YP_008141556.1| - 4.6e-05 22.9 12.1 4.6e-05 22.9 8.4 5.6 2 2 3 5 5 5 1 Domain of unknown function (DUF4201) DUF1341 PF07071.6 gi|518652036|ref|YP_008141556.1| - 0.0061 16.1 0.0 0.018 14.5 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1341) Reo_sigmaC PF04582.7 gi|518652036|ref|YP_008141556.1| - 0.073 12.2 16.3 0.065 12.4 0.3 4.4 4 1 1 5 5 5 0 Reovirus sigma C capsid protein AAA_21 PF13304.1 gi|518652036|ref|YP_008141556.1| - 0.1 12.5 60.9 0.09 12.7 17.7 4.4 1 1 0 2 2 2 0 AAA domain Laminin_I PF06008.9 gi|518652036|ref|YP_008141556.1| - 0.41 9.9 49.3 0.062 12.6 1.5 5.2 4 1 0 4 4 4 0 Laminin Domain I AAA_15 PF13175.1 gi|518652036|ref|YP_008141556.1| - 5.8 5.8 125.8 4.9e+02 -0.6 37.4 3.4 1 1 1 2 2 1 0 AAA ATPase domain Metallophos PF00149.23 gi|518652037|ref|YP_008141557.1| - 5.3e-14 52.0 0.1 9.3e-14 51.2 0.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|518652037|ref|YP_008141557.1| - 5.4e-13 49.0 0.0 1e-12 48.1 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF87 PF01935.12 gi|518652038|ref|YP_008141558.1| - 4e-34 118.4 0.3 7.7e-34 117.4 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|518652038|ref|YP_008141558.1| - 1.1e-20 74.2 0.1 3.9e-20 72.4 0.1 1.8 1 1 0 1 1 1 1 AAA-like domain HAS-barrel PF09378.5 gi|518652038|ref|YP_008141558.1| - 2e-14 53.2 3.5 3e-14 52.6 0.5 2.8 3 0 0 3 3 3 1 HAS barrel domain DUF853 PF05872.7 gi|518652038|ref|YP_008141558.1| - 2.6e-06 26.0 0.1 0.0055 15.1 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.13 gi|518652038|ref|YP_008141558.1| - 3.9e-06 26.4 0.0 0.058 12.8 0.0 2.3 2 0 0 2 2 2 2 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.4 gi|518652038|ref|YP_008141558.1| - 6.9e-06 24.9 0.0 0.00013 20.7 0.0 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Zot PF05707.7 gi|518652038|ref|YP_008141558.1| - 4.8e-05 22.9 0.0 0.0043 16.5 0.0 2.4 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) T4SS-DNA_transf PF02534.9 gi|518652038|ref|YP_008141558.1| - 4.9e-05 22.0 0.0 8.4e-05 21.3 0.0 1.3 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer AAA PF00004.24 gi|518652038|ref|YP_008141558.1| - 0.00017 21.7 0.1 0.0036 17.4 0.0 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ResIII PF04851.10 gi|518652038|ref|YP_008141558.1| - 0.035 13.9 0.0 0.2 11.5 0.0 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Zeta_toxin PF06414.7 gi|518652038|ref|YP_008141558.1| - 0.069 12.2 0.0 0.15 11.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NurA PF09376.5 gi|518652039|ref|YP_008141559.1| - 6.4e-19 68.3 3.6 9.8e-19 67.7 2.5 1.3 1 0 0 1 1 1 1 NurA domain DUF3920 PF13058.1 gi|518652039|ref|YP_008141559.1| - 0.01 15.6 0.3 0.022 14.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) rve PF00665.21 gi|518652040|ref|YP_008141560.1| - 4.5e-19 68.7 0.1 8.1e-19 67.9 0.1 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518652040|ref|YP_008141560.1| - 4.7e-18 64.4 0.4 1.5e-17 62.8 0.3 1.9 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.1 gi|518652040|ref|YP_008141560.1| - 2e-11 43.7 2.9 4.4e-11 42.6 2.0 1.6 1 0 0 1 1 1 1 HTH-like domain rve_2 PF13333.1 gi|518652040|ref|YP_008141560.1| - 3.4e-07 30.2 1.4 1.2e-06 28.4 0.9 2.0 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.1 gi|518652040|ref|YP_008141560.1| - 0.021 14.8 1.0 0.044 13.7 0.7 1.6 1 0 0 1 1 1 0 DDE domain DUF3685 PF12452.3 gi|518652040|ref|YP_008141560.1| - 0.025 13.7 0.1 0.025 13.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3685) NUMOD1 PF07453.8 gi|518652040|ref|YP_008141560.1| - 0.26 11.1 5.2 3.3 7.6 0.1 3.9 4 0 0 4 4 4 0 NUMOD1 domain HTH_Tnp_1 PF01527.15 gi|518652041|ref|YP_008141561.1| - 1.9e-10 40.5 0.0 2.8e-10 39.9 0.0 1.3 1 1 0 1 1 1 1 Transposase HTH_29 PF13551.1 gi|518652041|ref|YP_008141561.1| - 9.8e-06 25.6 0.0 1.1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.1 gi|518652041|ref|YP_008141561.1| - 1.2e-05 25.1 0.0 2.2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|518652041|ref|YP_008141561.1| - 0.00044 19.8 0.0 0.00066 19.2 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain LZ_Tnp_IS481 PF13011.1 gi|518652041|ref|YP_008141561.1| - 0.059 13.7 0.0 0.068 13.5 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 Phosphoesterase PF04185.9 gi|518652041|ref|YP_008141561.1| - 0.068 12.3 0.0 0.071 12.2 0.0 1.0 1 0 0 1 1 1 0 Phosphoesterase family AA_permease_C PF13906.1 gi|518652044|ref|YP_008141564.1| - 0.13 12.1 1.0 0.38 10.6 0.7 1.8 1 0 0 1 1 1 0 C-terminus of AA_permease AA_permease_2 PF13520.1 gi|518652045|ref|YP_008141565.1| - 5.3e-22 77.9 59.9 8.2e-22 77.3 41.5 1.3 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|518652045|ref|YP_008141565.1| - 6.5e-09 34.6 53.4 9.5e-09 34.1 37.0 1.2 1 0 0 1 1 1 1 Amino acid permease Photo_RC PF00124.14 gi|518652046|ref|YP_008141566.1| - 0.47 9.4 6.4 0.21 10.5 2.9 1.5 1 1 0 1 1 1 0 Photosynthetic reaction centre protein Bac_rhodopsin PF01036.13 gi|518652046|ref|YP_008141566.1| - 0.79 8.9 15.7 0.22 10.8 9.1 1.4 1 1 0 1 1 1 0 Bacteriorhodopsin-like protein Adenylsucc_synt PF00709.16 gi|518652048|ref|YP_008141568.1| - 3e-146 487.3 0.0 3.5e-146 487.1 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase 2OG-FeII_Oxy_2 PF13532.1 gi|518652048|ref|YP_008141568.1| - 0.097 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Proteasome PF00227.21 gi|518652049|ref|YP_008141569.1| - 4.8e-57 192.3 0.5 6e-57 192.0 0.4 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|518652049|ref|YP_008141569.1| - 6.9e-15 54.0 0.1 1.1e-14 53.4 0.1 1.3 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature TatD_DNase PF01026.16 gi|518652050|ref|YP_008141570.1| - 2.6e-13 49.7 0.0 4e-13 49.1 0.0 1.3 1 1 0 1 1 1 1 TatD related DNase Sld5 PF05916.6 gi|518652051|ref|YP_008141571.1| - 0.0024 18.1 1.3 0.0055 16.9 0.9 1.6 1 0 0 1 1 1 1 GINS complex protein Rota_NSP4 PF01452.11 gi|518652051|ref|YP_008141571.1| - 0.047 13.0 0.5 0.074 12.3 0.3 1.3 1 0 0 1 1 1 0 Rotavirus non structural protein FBP PF07299.6 gi|518652051|ref|YP_008141571.1| - 0.12 11.6 1.9 0.66 9.2 0.3 2.1 1 1 1 2 2 2 0 Fibronectin-binding protein (FBP) DUF1048 PF06304.6 gi|518652051|ref|YP_008141571.1| - 0.14 12.4 1.7 0.19 12.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1048) DM4_12 PF07841.8 gi|518652052|ref|YP_008141572.1| - 0.046 14.0 0.5 0.048 13.9 0.3 1.0 1 0 0 1 1 1 0 DM4/DM12 family Glycos_transf_2 PF00535.21 gi|518652053|ref|YP_008141573.1| - 5.4e-25 88.0 0.1 1e-24 87.0 0.1 1.5 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518652053|ref|YP_008141573.1| - 5.4e-19 68.9 0.0 8.8e-18 64.9 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|518652053|ref|YP_008141573.1| - 1.3e-17 63.8 0.4 2.1e-08 33.6 0.0 2.1 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|518652053|ref|YP_008141573.1| - 1e-08 35.1 0.0 1.4e-08 34.6 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_7C PF02709.9 gi|518652053|ref|YP_008141573.1| - 7.6e-05 22.0 0.3 0.00021 20.7 0.2 1.9 1 1 1 2 2 2 1 N-terminal domain of galactosyltransferase Glyco_transf_21 PF13506.1 gi|518652053|ref|YP_008141573.1| - 0.0083 15.4 0.0 0.18 11.0 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|518652053|ref|YP_008141573.1| - 0.033 14.4 0.0 0.09 13.0 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family 2 HTH_10 PF04967.7 gi|518652054|ref|YP_008141574.1| - 1.2e-19 69.6 0.0 2.6e-19 68.5 0.0 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.11 gi|518652054|ref|YP_008141574.1| - 0.011 15.0 0.0 0.021 14.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 CENP-B_N PF04218.8 gi|518652054|ref|YP_008141574.1| - 0.28 10.6 1.6 0.97 8.9 0.2 2.6 2 1 0 2 2 2 0 CENP-B N-terminal DNA-binding domain HMGL-like PF00682.14 gi|518652055|ref|YP_008141575.1| - 2.7e-38 131.9 0.6 1.5e-37 129.4 0.4 1.9 1 1 0 1 1 1 1 HMGL-like CoA_transf_3 PF02515.12 gi|518652056|ref|YP_008141576.1| - 1.3e-41 141.9 0.0 1.8e-41 141.5 0.0 1.2 1 0 0 1 1 1 1 CoA-transferase family III RNase_H_2 PF13482.1 gi|518652056|ref|YP_008141576.1| - 0.026 14.3 0.4 0.065 13.0 0.1 1.7 1 1 1 2 2 2 0 RNase_H superfamily Sugar_tr PF00083.19 gi|518652057|ref|YP_008141577.1| - 1.2e-35 122.9 28.2 1.6e-35 122.6 19.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652057|ref|YP_008141577.1| - 6e-35 120.5 43.8 6e-33 114.0 18.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518652057|ref|YP_008141577.1| - 0.00022 19.7 11.8 0.00022 19.7 8.2 2.9 2 1 1 3 3 3 2 MFS/sugar transport protein DUF1228 PF06779.9 gi|518652057|ref|YP_008141577.1| - 0.0037 17.2 1.8 0.0037 17.2 1.3 2.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1228) MFS_3 PF05977.8 gi|518652057|ref|YP_008141577.1| - 0.83 7.6 9.2 0.061 11.4 2.4 1.9 2 0 0 2 2 2 0 Transmembrane secretion effector DUF4231 PF14015.1 gi|518652057|ref|YP_008141577.1| - 1.2 9.1 0.0 1.2 9.1 0.0 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF4231) Abhydrolase_6 PF12697.2 gi|518652058|ref|YP_008141578.1| - 8.7e-16 58.4 0.0 1.3e-15 57.9 0.0 1.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|518652058|ref|YP_008141578.1| - 9.1e-09 35.2 0.0 1.4e-08 34.5 0.0 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|518652058|ref|YP_008141578.1| - 0.0004 20.0 0.0 0.077 12.5 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Nramp PF01566.13 gi|518652059|ref|YP_008141579.1| - 5.9e-41 140.4 27.4 8.3e-41 139.9 19.0 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein RNA_pol_N PF01194.12 gi|518652060|ref|YP_008141580.1| - 8.9e-26 89.6 0.3 1.1e-25 89.4 0.2 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Yippee-Mis18 PF03226.9 gi|518652060|ref|YP_008141580.1| - 0.069 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Ribosomal_S9 PF00380.14 gi|518652061|ref|YP_008141581.1| - 2.5e-33 114.8 0.9 2.8e-33 114.7 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.13 gi|518652062|ref|YP_008141582.1| - 3.5e-23 82.0 0.0 4.1e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18e PF00828.14 gi|518652063|ref|YP_008141583.1| - 2.4e-08 34.4 0.0 3.1e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Sugar_tr PF00083.19 gi|518652064|ref|YP_008141584.1| - 1e-45 156.2 32.1 1.2e-45 155.9 22.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652064|ref|YP_008141584.1| - 1.3e-25 89.8 31.2 1.3e-25 89.8 21.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily SpoU_methylase PF00588.14 gi|518652065|ref|YP_008141585.1| - 2.6e-27 95.4 0.0 3.5e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family FANCI_S3 PF14677.1 gi|518652065|ref|YP_008141585.1| - 0.076 12.3 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 FKBP_C PF00254.23 gi|518652066|ref|YP_008141586.1| - 3.6e-08 33.2 2.7 6.6e-08 32.4 1.3 2.2 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4230 PF14014.1 gi|518652066|ref|YP_008141586.1| - 0.0011 18.8 6.4 0.0011 18.8 4.5 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4230) DAGK_cat PF00781.19 gi|518652066|ref|YP_008141586.1| - 0.019 14.3 0.2 0.044 13.2 0.0 1.6 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain Aldedh PF00171.17 gi|518652067|ref|YP_008141587.1| - 2.9e-156 520.4 0.0 3.2e-156 520.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|518652067|ref|YP_008141587.1| - 5.2e-08 32.0 0.0 7.1e-08 31.5 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) PK PF00224.16 gi|518652068|ref|YP_008141588.1| - 6.6e-90 301.2 2.7 1.1e-89 300.5 1.9 1.3 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.11 gi|518652068|ref|YP_008141588.1| - 1.7e-20 72.6 0.2 3.5e-20 71.7 0.1 1.5 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain tRNA-synt_1d PF00750.14 gi|518652069|ref|YP_008141589.1| - 5.8e-47 160.2 3.9 8.2e-47 159.7 2.7 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|518652069|ref|YP_008141589.1| - 2.4e-19 69.4 0.7 4.8e-19 68.4 0.1 1.9 2 0 0 2 2 2 1 DALR anticodon binding domain tRNA-synt_1f PF01921.13 gi|518652069|ref|YP_008141589.1| - 6.6e-05 21.7 0.4 0.1 11.2 0.0 2.8 3 0 0 3 3 3 2 tRNA synthetases class I (K) ApoLp-III PF07464.6 gi|518652069|ref|YP_008141589.1| - 0.059 13.3 0.2 2 8.4 0.0 2.7 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DHQ_synthase PF01761.15 gi|518652070|ref|YP_008141590.1| - 4.6e-79 265.0 0.0 5.7e-79 264.7 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.1 gi|518652070|ref|YP_008141590.1| - 4.4e-05 22.8 0.6 0.00041 19.7 0.4 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase XRN_N PF03159.13 gi|518652070|ref|YP_008141590.1| - 0.018 14.4 0.0 0.039 13.3 0.0 1.5 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus Shikimate_dh_N PF08501.6 gi|518652072|ref|YP_008141592.1| - 3.9e-18 65.2 0.0 7.6e-18 64.3 0.0 1.5 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|518652072|ref|YP_008141592.1| - 5.7e-06 26.4 0.1 2e-05 24.6 0.1 1.8 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 gi|518652072|ref|YP_008141592.1| - 0.0011 19.1 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.14 gi|518652072|ref|YP_008141592.1| - 0.043 12.8 0.1 0.15 11.1 0.0 2.0 1 1 1 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 2-Hacid_dh_C PF02826.14 gi|518652072|ref|YP_008141592.1| - 0.043 12.9 0.0 0.065 12.3 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF2338 PF10100.4 gi|518652072|ref|YP_008141592.1| - 0.09 11.1 0.2 0.83 7.9 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2338) Pyr_redox_3 PF13738.1 gi|518652072|ref|YP_008141592.1| - 0.11 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GHMP_kinases_N PF00288.21 gi|518652073|ref|YP_008141593.1| - 1.7e-09 37.6 0.1 3e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain Methyltransf_3 PF01596.12 gi|518652073|ref|YP_008141593.1| - 0.036 13.1 0.1 0.054 12.5 0.1 1.2 1 0 0 1 1 1 0 O-methyltransferase SdiA-regulated PF06977.6 gi|518652073|ref|YP_008141593.1| - 0.037 12.9 0.0 0.092 11.6 0.0 1.6 1 1 1 2 2 2 0 SdiA-regulated GHMP_kinases_C PF08544.8 gi|518652073|ref|YP_008141593.1| - 0.04 14.1 0.0 0.08 13.1 0.0 1.5 1 0 0 1 1 1 0 GHMP kinases C terminal EPSP_synthase PF00275.15 gi|518652074|ref|YP_008141594.1| - 8.8e-69 231.9 0.0 1.1e-68 231.6 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Spt5-NGN PF03439.8 gi|518652076|ref|YP_008141596.1| - 8.4e-16 57.5 0.2 1.9e-15 56.3 0.1 1.6 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|518652076|ref|YP_008141596.1| - 1e-05 25.0 0.0 2.2e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 KOW motif NusG PF02357.14 gi|518652076|ref|YP_008141596.1| - 0.0051 17.0 0.6 0.032 14.4 0.0 2.4 3 0 0 3 3 3 1 Transcription termination factor nusG ChpXY PF10216.4 gi|518652077|ref|YP_008141597.1| - 0.0034 16.3 0.2 0.0054 15.6 0.1 1.3 1 0 0 1 1 1 1 CO2 hydration protein (ChpXY) PUA PF01472.15 gi|518652078|ref|YP_008141598.1| - 9.8e-21 73.2 0.0 1.4e-20 72.7 0.0 1.3 1 0 0 1 1 1 1 PUA domain DUF1947 PF09183.5 gi|518652078|ref|YP_008141598.1| - 5.9e-18 64.3 0.5 1.3e-17 63.2 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) AhpC-TSA PF00578.16 gi|518652079|ref|YP_008141599.1| - 9.9e-42 141.5 0.5 1.2e-41 141.2 0.4 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|518652079|ref|YP_008141599.1| - 2.1e-29 101.9 0.4 2.4e-29 101.7 0.3 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.9 gi|518652079|ref|YP_008141599.1| - 0.00026 20.6 3.4 0.00047 19.8 2.4 1.4 1 1 0 1 1 1 1 SCO1/SenC DUF899 PF05988.7 gi|518652079|ref|YP_008141599.1| - 0.00056 19.3 0.0 0.00061 19.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) AhpC-TSA_2 PF13911.1 gi|518652079|ref|YP_008141599.1| - 0.0072 16.2 0.0 0.011 15.7 0.0 1.4 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme Ribosomal_60s PF00428.14 gi|518652080|ref|YP_008141600.1| - 5e-16 58.8 15.8 6.1e-16 58.5 10.9 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Presenilin PF01080.12 gi|518652080|ref|YP_008141600.1| - 0.025 13.4 0.4 0.025 13.4 0.3 1.0 1 0 0 1 1 1 0 Presenilin Spot_14 PF07084.7 gi|518652080|ref|YP_008141600.1| - 0.1 12.4 1.7 0.11 12.3 1.2 1.2 1 0 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 DUF809 PF05663.6 gi|518652080|ref|YP_008141600.1| - 0.14 12.0 3.8 0.19 11.6 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) RNase_H2-Ydr279 PF09468.5 gi|518652080|ref|YP_008141600.1| - 0.34 10.0 6.0 0.35 10.0 4.2 1.0 1 0 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) Sigma70_ner PF04546.8 gi|518652080|ref|YP_008141600.1| - 0.45 10.1 7.3 0.53 9.8 5.0 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region Peptidase_S49_N PF08496.5 gi|518652080|ref|YP_008141600.1| - 0.6 9.8 4.4 0.69 9.7 3.0 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal AF1Q PF15017.1 gi|518652080|ref|YP_008141600.1| - 6.3 6.7 8.1 13 5.7 5.6 1.6 1 1 0 1 1 1 0 Drug resistance and apoptosis regulator Ribosomal_L10 PF00466.15 gi|518652081|ref|YP_008141601.1| - 2.3e-17 62.7 0.5 4.6e-17 61.7 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_L1 PF00687.16 gi|518652082|ref|YP_008141602.1| - 2.4e-42 144.7 4.0 2.9e-42 144.4 2.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.9 gi|518652083|ref|YP_008141603.1| - 1.9e-22 78.4 2.2 3.1e-22 77.7 0.8 1.9 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|518652083|ref|YP_008141603.1| - 5.9e-22 77.6 1.3 1.1e-21 76.7 0.9 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain 2-ph_phosp PF04029.9 gi|518652084|ref|YP_008141604.1| - 7.4e-50 169.0 0.0 1.9e-49 167.7 0.0 1.6 1 1 0 1 1 1 1 2-phosphosulpholactate phosphatase MAF_flag10 PF01973.13 gi|518652085|ref|YP_008141605.1| - 7.5e-30 103.6 1.0 1e-29 103.2 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 DUF373 PF04123.8 gi|518652086|ref|YP_008141606.1| - 5.5e-94 315.0 17.7 6.8e-94 314.6 12.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DUF3180 PF11377.3 gi|518652086|ref|YP_008141606.1| - 3 7.6 13.3 3.7 7.3 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3180) IncA PF04156.9 gi|518652086|ref|YP_008141606.1| - 9.5 5.7 15.7 0.85 9.1 0.3 2.6 3 0 0 3 3 3 0 IncA protein DUF2080 PF09853.4 gi|518652087|ref|YP_008141607.1| - 4.7e-14 51.8 0.3 5e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) DUF488 PF04343.8 gi|518652088|ref|YP_008141608.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 TrmB PF01978.14 gi|518652089|ref|YP_008141609.1| - 0.00083 19.0 0.4 0.0023 17.5 0.3 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.1 gi|518652089|ref|YP_008141609.1| - 0.015 14.8 0.1 0.046 13.3 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain ROS_MUCR PF05443.6 gi|518652089|ref|YP_008141609.1| - 0.086 12.6 0.0 0.097 12.4 0.0 1.0 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein Lactamase_B_2 PF12706.2 gi|518652090|ref|YP_008141610.1| - 3.2e-14 52.9 0.1 4e-14 52.6 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|518652090|ref|YP_008141610.1| - 6.8e-11 42.1 0.0 9.4e-11 41.7 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily KH_5 PF13184.1 gi|518652090|ref|YP_008141610.1| - 0.022 14.5 0.6 0.11 12.3 0.4 2.1 1 1 0 1 1 1 0 NusA-like KH domain Pyr_redox_2 PF07992.9 gi|518652091|ref|YP_008141611.1| - 9.4e-24 84.4 8.3 6.3e-12 45.8 0.4 3.2 1 1 2 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518652091|ref|YP_008141611.1| - 2.5e-19 70.1 0.2 2e-12 47.6 0.0 3.0 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518652091|ref|YP_008141611.1| - 5.6e-15 55.5 2.1 6.5e-13 48.8 0.2 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.1 gi|518652091|ref|YP_008141611.1| - 1.5e-10 40.5 0.0 1.1e-05 24.5 0.0 3.1 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.9 gi|518652091|ref|YP_008141611.1| - 2.4e-10 39.4 1.9 0.027 12.9 0.0 4.0 3 1 1 4 4 4 3 HI0933-like protein Thi4 PF01946.12 gi|518652091|ref|YP_008141611.1| - 2.9e-06 26.5 0.8 0.011 14.8 0.0 2.5 2 1 0 2 2 2 2 Thi4 family NAD_binding_9 PF13454.1 gi|518652091|ref|YP_008141611.1| - 8.3e-05 22.4 2.0 2.5 7.8 0.0 4.0 3 1 1 4 4 4 1 FAD-NAD(P)-binding FMO-like PF00743.14 gi|518652091|ref|YP_008141611.1| - 0.00011 20.5 0.6 0.00038 18.7 0.0 1.9 1 1 1 2 2 2 1 Flavin-binding monooxygenase-like FAD_oxidored PF12831.2 gi|518652091|ref|YP_008141611.1| - 0.00016 20.8 0.0 0.31 10.0 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase DAO PF01266.19 gi|518652091|ref|YP_008141611.1| - 0.00036 19.5 1.1 1.1 8.1 0.1 3.2 3 1 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|518652091|ref|YP_008141611.1| - 0.001 19.0 0.0 0.017 15.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|518652091|ref|YP_008141611.1| - 0.0015 17.5 0.1 1.2 8.0 0.0 3.4 3 1 0 3 3 3 1 Lycopene cyclase protein NAD_binding_7 PF13241.1 gi|518652091|ref|YP_008141611.1| - 0.024 14.8 1.2 0.054 13.7 0.4 2.0 2 1 0 2 2 1 0 Putative NAD(P)-binding DUF1874 PF08960.5 gi|518652091|ref|YP_008141611.1| - 0.043 13.5 1.8 0.097 12.4 1.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1874) FAD_binding_2 PF00890.19 gi|518652091|ref|YP_008141611.1| - 0.047 12.5 2.2 1.4 7.7 0.0 3.1 2 1 2 4 4 4 0 FAD binding domain FAD_binding_3 PF01494.14 gi|518652091|ref|YP_008141611.1| - 0.12 11.3 0.1 1.1 8.1 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain Diphthamide_syn PF01866.12 gi|518652092|ref|YP_008141612.1| - 5.4e-85 285.3 0.1 6.2e-85 285.1 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Vip3A_N PF12495.3 gi|518652092|ref|YP_008141612.1| - 0.03 13.9 1.2 0.048 13.3 0.1 1.8 2 0 0 2 2 2 0 Vegetative insecticide protein 3A N terminal Radical_SAM PF04055.16 gi|518652093|ref|YP_008141613.1| - 4.2e-15 56.3 0.0 8.6e-15 55.2 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.15 gi|518652093|ref|YP_008141613.1| - 1.8e-14 53.3 0.1 3.6e-14 52.3 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 gi|518652093|ref|YP_008141613.1| - 1.8e-06 27.6 0.1 4.1e-06 26.4 0.1 1.6 1 0 0 1 1 1 1 TRAM domain HTH_24 PF13412.1 gi|518652094|ref|YP_008141614.1| - 1.4e-12 46.7 0.2 2.4e-12 46.0 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518652094|ref|YP_008141614.1| - 1.1e-11 44.1 0.0 1.8e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|518652094|ref|YP_008141614.1| - 8.4e-10 38.2 0.0 1.5e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 AsnC family Sigma70_r4_2 PF08281.7 gi|518652094|ref|YP_008141614.1| - 2.4e-05 23.7 0.0 4.5e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|518652094|ref|YP_008141614.1| - 0.00012 21.5 0.1 0.00045 19.7 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_DeoR PF08220.7 gi|518652094|ref|YP_008141614.1| - 0.00014 21.3 0.1 0.00029 20.3 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.5 gi|518652094|ref|YP_008141614.1| - 0.00015 21.2 0.0 0.00028 20.3 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sigma70_r4 PF04545.11 gi|518652094|ref|YP_008141614.1| - 0.0002 20.6 0.1 0.00038 19.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.1 gi|518652094|ref|YP_008141614.1| - 0.00021 21.0 0.1 0.00046 19.9 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.7 gi|518652094|ref|YP_008141614.1| - 0.00024 20.6 0.1 0.00046 19.7 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_36 PF13730.1 gi|518652094|ref|YP_008141614.1| - 0.00069 19.6 0.0 0.0012 18.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|518652094|ref|YP_008141614.1| - 0.00098 18.7 0.0 0.0017 17.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_29 PF13551.1 gi|518652094|ref|YP_008141614.1| - 0.0016 18.5 0.1 0.0031 17.6 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.1 gi|518652094|ref|YP_008141614.1| - 0.0018 17.4 0.1 0.0031 16.6 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_38 PF13936.1 gi|518652094|ref|YP_008141614.1| - 0.0019 17.6 0.1 0.0046 16.4 0.1 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_20 PF12840.2 gi|518652094|ref|YP_008141614.1| - 0.0025 17.5 0.0 0.005 16.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|518652094|ref|YP_008141614.1| - 0.0028 17.9 0.0 0.0054 17.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|518652094|ref|YP_008141614.1| - 0.0033 17.0 0.1 0.0074 15.9 0.1 1.5 1 0 0 1 1 1 1 MarR family GerE PF00196.14 gi|518652094|ref|YP_008141614.1| - 0.0037 16.5 0.1 0.013 14.8 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_Mga PF08280.6 gi|518652094|ref|YP_008141614.1| - 0.0051 16.5 0.0 0.0092 15.7 0.0 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain GntR PF00392.16 gi|518652094|ref|YP_008141614.1| - 0.0088 15.4 0.0 0.016 14.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.15 gi|518652094|ref|YP_008141614.1| - 0.012 15.7 0.1 0.057 13.5 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator Sigma70_ECF PF07638.6 gi|518652094|ref|YP_008141614.1| - 0.02 14.5 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_17 PF12728.2 gi|518652094|ref|YP_008141614.1| - 0.025 14.8 0.0 0.045 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_terminase PF10668.4 gi|518652094|ref|YP_008141614.1| - 0.039 13.7 0.1 0.1 12.4 0.0 1.7 2 0 0 2 2 1 0 Phage terminase small subunit HTH_40 PF14493.1 gi|518652094|ref|YP_008141614.1| - 0.042 14.0 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain CheR_N PF03705.10 gi|518652094|ref|YP_008141614.1| - 0.05 12.9 0.0 0.1 12.0 0.0 1.5 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain TrmB PF01978.14 gi|518652094|ref|YP_008141614.1| - 0.063 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB FeoC PF09012.5 gi|518652094|ref|YP_008141614.1| - 0.085 12.5 0.1 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_28 PF13518.1 gi|518652094|ref|YP_008141614.1| - 0.094 12.7 0.1 0.28 11.2 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain Phage_NinH PF06322.6 gi|518652094|ref|YP_008141614.1| - 0.11 12.1 0.2 0.28 10.8 0.1 1.7 1 0 0 1 1 1 0 Phage NinH protein HTH_5 PF01022.15 gi|518652094|ref|YP_008141614.1| - 0.12 12.1 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Lyase_1 PF00206.15 gi|518652095|ref|YP_008141615.1| - 1.4e-83 280.7 0.1 2.5e-83 279.8 0.0 1.4 2 0 0 2 2 2 1 Lyase FumaraseC_C PF10415.4 gi|518652095|ref|YP_008141615.1| - 2.1e-11 43.7 0.1 6.3e-11 42.1 0.0 1.8 1 0 0 1 1 1 1 Fumarase C C-terminus DUF981 PF06168.6 gi|518652096|ref|YP_008141616.1| - 8.5e-47 159.4 17.1 9.7e-47 159.2 11.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF3007 PF11460.3 gi|518652096|ref|YP_008141616.1| - 2.2 8.3 4.8 12 6.0 0.5 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3007) Iso_dh PF00180.15 gi|518652097|ref|YP_008141617.1| - 7.5e-43 146.7 0.0 8.8e-43 146.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase TAF PF02969.12 gi|518652097|ref|YP_008141617.1| - 0.075 12.9 0.0 0.26 11.2 0.0 1.9 2 0 0 2 2 2 0 TATA box binding protein associated factor (TAF) Peptidase_M50 PF02163.17 gi|518652098|ref|YP_008141618.1| - 0.11 11.4 9.2 0.2 10.5 4.2 2.7 1 1 1 2 2 2 0 Peptidase family M50 DUF1469 PF07332.6 gi|518652098|ref|YP_008141618.1| - 6.7 6.4 8.4 24 4.6 3.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1469) tRNA-synt_2c PF01411.14 gi|518652099|ref|YP_008141619.1| - 1.9e-87 293.8 0.0 4.9e-87 292.5 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|518652099|ref|YP_008141619.1| - 1.7e-11 43.7 0.5 3.6e-11 42.7 0.3 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain dCMP_cyt_deam_1 PF00383.17 gi|518652100|ref|YP_008141620.1| - 9.2e-29 99.1 0.4 1.2e-28 98.7 0.3 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.1 gi|518652100|ref|YP_008141620.1| - 0.00072 19.2 0.2 0.00088 18.9 0.1 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC_N PF08210.6 gi|518652100|ref|YP_008141620.1| - 0.12 12.0 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain MFS_1 PF07690.11 gi|518652101|ref|YP_008141621.1| - 0.0066 15.1 8.5 0.0075 15.0 5.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily 7TM-7TMR_HD PF07698.6 gi|518652101|ref|YP_008141621.1| - 0.015 14.7 8.3 0.017 14.5 5.7 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase Claudin_3 PF06653.6 gi|518652101|ref|YP_008141621.1| - 0.016 14.9 9.1 0.02 14.6 6.3 1.2 1 0 0 1 1 1 0 Tight junction protein, Claudin-like UPF0104 PF03706.8 gi|518652101|ref|YP_008141621.1| - 0.03 13.5 1.2 0.045 13.0 0.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0104) MpPF26 PF07666.6 gi|518652101|ref|YP_008141621.1| - 0.033 14.0 14.7 0.059 13.2 4.0 2.0 1 1 1 2 2 2 0 M penetrans paralogue family 26 DUF3290 PF11694.3 gi|518652101|ref|YP_008141621.1| - 0.059 13.1 7.6 0.084 12.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) AA_permease PF00324.16 gi|518652101|ref|YP_008141621.1| - 0.13 10.5 9.8 0.18 10.1 6.8 1.2 1 0 0 1 1 1 0 Amino acid permease DUF308 PF03729.8 gi|518652101|ref|YP_008141621.1| - 0.17 11.8 11.9 0.65 10.0 3.3 2.5 1 1 1 2 2 2 0 Short repeat of unknown function (DUF308) H_PPase PF03030.11 gi|518652101|ref|YP_008141621.1| - 0.19 9.9 3.9 0.21 9.8 2.7 1.0 1 0 0 1 1 1 0 Inorganic H+ pyrophosphatase DUF805 PF05656.9 gi|518652101|ref|YP_008141621.1| - 0.21 11.4 9.7 5.8 6.7 6.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DUF4064 PF13273.1 gi|518652101|ref|YP_008141621.1| - 0.29 11.2 18.4 50 4.0 12.7 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Yip1 PF04893.12 gi|518652101|ref|YP_008141621.1| - 0.32 10.4 9.2 0.5 9.8 6.4 1.3 1 1 0 1 1 1 0 Yip1 domain YwiC PF14256.1 gi|518652101|ref|YP_008141621.1| - 0.38 10.8 5.2 3.6 7.6 0.9 2.2 1 1 1 2 2 2 0 YwiC-like protein DUF456 PF04306.8 gi|518652101|ref|YP_008141621.1| - 0.45 10.5 4.5 1.1 9.2 3.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF456) Cation_ATPase_C PF00689.16 gi|518652101|ref|YP_008141621.1| - 0.52 9.8 10.8 1.2 8.6 7.3 1.5 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus Lig_chan PF00060.21 gi|518652101|ref|YP_008141621.1| - 0.62 9.7 8.8 0.41 10.3 3.5 2.0 1 1 1 2 2 2 0 Ligand-gated ion channel Wzy_C PF04932.10 gi|518652101|ref|YP_008141621.1| - 0.75 9.5 8.7 62 3.3 5.3 2.0 1 1 0 1 1 1 0 O-Antigen ligase DUF3112 PF11309.3 gi|518652101|ref|YP_008141621.1| - 0.84 9.4 10.4 1.2 8.8 7.2 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3112) EamA PF00892.15 gi|518652101|ref|YP_008141621.1| - 0.85 9.6 9.6 1.7 8.7 1.9 2.1 1 1 1 2 2 2 0 EamA-like transporter family Bap31 PF05529.7 gi|518652101|ref|YP_008141621.1| - 1.3 8.4 4.5 0.17 11.2 0.2 1.6 2 0 0 2 2 2 0 B-cell receptor-associated protein 31-like SPC25 PF06703.6 gi|518652101|ref|YP_008141621.1| - 1.7 8.1 4.4 1.6 8.3 1.8 1.7 1 1 1 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) SdpI PF13630.1 gi|518652101|ref|YP_008141621.1| - 1.8 8.3 17.2 1.7 8.3 2.4 2.4 1 1 1 2 2 2 0 SdpI/YhfL protein family NfeD PF01957.13 gi|518652101|ref|YP_008141621.1| - 2.5 8.2 9.9 0.22 11.6 1.4 2.0 1 1 0 2 2 2 0 NfeD-like C-terminal, partner-binding Zip PF02535.17 gi|518652101|ref|YP_008141621.1| - 2.6 6.9 5.1 6.8 5.5 3.8 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter DUF2976 PF11190.3 gi|518652101|ref|YP_008141621.1| - 4.5 6.8 10.6 0.73 9.4 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) DUF1029 PF06269.7 gi|518652101|ref|YP_008141621.1| - 5.9 6.9 11.7 10 6.2 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1029) UPF0233 PF06781.7 gi|518652101|ref|YP_008141621.1| - 9.7 5.8 10.1 0.41 10.2 2.7 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0233) ABC2_membrane_2 PF12679.2 gi|518652102|ref|YP_008141622.1| - 0.0057 15.5 0.0 0.017 14.0 0.0 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein HTH_3 PF01381.17 gi|518652102|ref|YP_008141622.1| - 0.033 14.0 0.2 0.091 12.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix HSP20 PF00011.16 gi|518652103|ref|YP_008141623.1| - 3.4e-08 33.2 2.9 8.5e-07 28.7 2.0 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|518652103|ref|YP_008141623.1| - 1.2e-05 25.7 2.6 1.8e-05 25.1 1.8 1.2 1 0 0 1 1 1 1 CS domain RE_ScaI PF09569.5 gi|518652103|ref|YP_008141623.1| - 0.087 12.3 0.1 1.7 8.1 0.0 2.1 2 0 0 2 2 2 0 ScaI restriction endonuclease ArsR PF09824.4 gi|518652104|ref|YP_008141624.1| - 1.9e-06 27.2 0.2 3.4e-06 26.4 0.1 1.5 2 0 0 2 2 2 1 ArsR transcriptional regulator HTH_5 PF01022.15 gi|518652104|ref|YP_008141624.1| - 9e-05 22.0 0.1 0.00017 21.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2250 PF10007.4 gi|518652104|ref|YP_008141624.1| - 0.00052 19.8 0.3 0.076 12.9 0.0 2.6 3 0 0 3 3 3 1 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.2 gi|518652104|ref|YP_008141624.1| - 0.0012 18.4 0.0 0.0023 17.5 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|518652104|ref|YP_008141624.1| - 0.0013 18.4 0.0 0.0027 17.4 0.0 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|518652104|ref|YP_008141624.1| - 0.0014 18.2 0.7 0.0041 16.7 0.0 2.1 2 0 0 2 2 2 1 HTH domain TrmB PF01978.14 gi|518652104|ref|YP_008141624.1| - 0.0074 15.9 0.0 0.079 12.6 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|518652104|ref|YP_008141624.1| - 0.014 14.7 0.3 0.014 14.7 0.2 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.1 gi|518652104|ref|YP_008141624.1| - 0.015 15.0 0.1 0.04 13.7 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PadR PF03551.9 gi|518652104|ref|YP_008141624.1| - 0.018 14.7 0.0 0.088 12.5 0.0 2.1 2 1 0 2 2 2 0 Transcriptional regulator PadR-like family DUF4423 PF14394.1 gi|518652104|ref|YP_008141624.1| - 0.027 14.0 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) MarR PF01047.17 gi|518652104|ref|YP_008141624.1| - 0.075 12.7 0.1 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 MarR family z-alpha PF02295.12 gi|518652104|ref|YP_008141624.1| - 0.12 12.1 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain Rho_Binding PF08912.6 gi|518652104|ref|YP_008141624.1| - 0.2 11.9 1.7 9 6.6 0.1 2.4 2 0 0 2 2 2 0 Rho Binding OsmC PF02566.14 gi|518652105|ref|YP_008141625.1| - 4.8e-15 55.5 0.0 6.2e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 OsmC-like protein PALP PF00291.20 gi|518652106|ref|YP_008141626.1| - 3.2e-49 167.8 0.0 3.7e-49 167.6 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme GTP_EFTU PF00009.22 gi|518652107|ref|YP_008141627.1| - 1.1e-56 191.3 0.9 1.9e-56 190.4 0.6 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.19 gi|518652107|ref|YP_008141627.1| - 1e-24 86.1 0.0 2.8e-24 84.8 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_IV PF03764.13 gi|518652107|ref|YP_008141627.1| - 1.4e-24 85.9 0.0 3.7e-24 84.6 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.1 gi|518652107|ref|YP_008141627.1| - 1.3e-23 82.6 0.1 2.5e-23 81.7 0.1 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.20 gi|518652107|ref|YP_008141627.1| - 5.4e-12 45.6 1.5 1.4e-11 44.2 1.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|518652107|ref|YP_008141627.1| - 0.0014 18.5 0.1 0.0035 17.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.5 gi|518652107|ref|YP_008141627.1| - 0.027 13.6 0.0 0.063 12.4 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Septin PF00735.13 gi|518652107|ref|YP_008141627.1| - 0.029 13.3 0.1 0.048 12.6 0.1 1.2 1 0 0 1 1 1 0 Septin Ras PF00071.17 gi|518652107|ref|YP_008141627.1| - 0.041 13.2 0.0 0.085 12.2 0.0 1.5 1 0 0 1 1 1 0 Ras family T2SM_b PF10741.4 gi|518652107|ref|YP_008141627.1| - 0.054 13.1 0.1 0.28 10.7 0.0 2.0 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M subtype b DUF4115 PF13464.1 gi|518652107|ref|YP_008141627.1| - 0.098 12.3 0.2 2.6 7.7 0.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4115) 7TMR-DISM_7TM PF07695.6 gi|518652109|ref|YP_008141629.1| - 0.0011 18.6 1.7 0.0013 18.4 1.1 1.0 1 0 0 1 1 1 1 7TM diverse intracellular signalling DUF3784 PF12650.2 gi|518652109|ref|YP_008141629.1| - 0.0032 17.3 4.7 0.0036 17.1 3.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3784) DUF2919 PF11143.3 gi|518652109|ref|YP_008141629.1| - 0.0037 17.0 0.5 0.0045 16.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) SdpI PF13630.1 gi|518652109|ref|YP_008141629.1| - 0.0043 16.7 5.6 0.0051 16.4 3.9 1.1 1 0 0 1 1 1 1 SdpI/YhfL protein family SURF4 PF02077.10 gi|518652109|ref|YP_008141629.1| - 0.013 14.8 2.7 0.014 14.7 1.9 1.0 1 0 0 1 1 1 0 SURF4 family Ceramidase PF05875.7 gi|518652109|ref|YP_008141629.1| - 0.029 13.4 2.0 0.033 13.3 1.4 1.0 1 0 0 1 1 1 0 Ceramidase DUF3671 PF12420.3 gi|518652109|ref|YP_008141629.1| - 0.03 14.2 9.0 0.04 13.9 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF4191 PF13829.1 gi|518652109|ref|YP_008141629.1| - 0.045 12.8 0.9 0.048 12.7 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) SPC12 PF06645.8 gi|518652109|ref|YP_008141629.1| - 0.048 13.4 5.4 0.056 13.2 3.7 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF3796 PF12676.2 gi|518652109|ref|YP_008141629.1| - 0.05 13.8 5.3 0.053 13.7 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) Tetraspannin PF00335.15 gi|518652109|ref|YP_008141629.1| - 0.051 12.8 1.3 0.061 12.6 0.9 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF1673 PF07895.6 gi|518652109|ref|YP_008141629.1| - 0.16 11.4 3.6 0.16 11.4 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) DUF2116 PF09889.4 gi|518652109|ref|YP_008141629.1| - 0.16 11.7 0.1 0.16 11.7 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2207 PF09972.4 gi|518652109|ref|YP_008141629.1| - 0.18 10.3 3.5 0.2 10.2 2.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) 7TM_GPCR_Srv PF10323.4 gi|518652109|ref|YP_008141629.1| - 0.19 10.8 7.6 2.2 7.3 0.1 2.0 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv ATG27 PF09451.5 gi|518652109|ref|YP_008141629.1| - 0.19 10.9 9.3 11 5.1 6.5 2.0 1 1 0 1 1 1 0 Autophagy-related protein 27 DUF3593 PF12159.3 gi|518652109|ref|YP_008141629.1| - 0.22 11.3 3.9 2 8.2 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3593) DUF4199 PF13858.1 gi|518652109|ref|YP_008141629.1| - 0.31 10.9 7.3 0.36 10.7 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Afaf PF15339.1 gi|518652109|ref|YP_008141629.1| - 1.4 8.4 4.0 0.51 9.9 0.9 1.6 1 1 1 2 2 2 0 Acrosome formation-associated factor CcmE PF03100.10 gi|518652111|ref|YP_008141631.1| - 0.096 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 CcmE DUF2023 PF09633.5 gi|518652111|ref|YP_008141631.1| - 0.11 12.4 0.1 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) Transposase_mut PF00872.13 gi|518652112|ref|YP_008141632.1| - 1.1e-88 297.4 0.0 1.5e-88 296.9 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518652112|ref|YP_008141632.1| - 1.3e-09 38.0 0.0 3e-09 36.9 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.1 gi|518652112|ref|YP_008141632.1| - 0.00055 19.9 0.2 1.2 9.1 0.1 2.5 1 1 0 2 2 2 2 DDE domain DDE_Tnp_1 PF01609.16 gi|518652113|ref|YP_008141633.1| - 1.6e-22 80.1 0.1 3.4e-22 79.0 0.0 1.5 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652113|ref|YP_008141633.1| - 0.0028 17.4 0.0 0.0067 16.1 0.0 1.7 1 0 0 1 1 1 1 Transposase DDE domain HTH_26 PF13443.1 gi|518652113|ref|YP_008141633.1| - 0.079 13.1 0.6 0.28 11.4 0.0 2.2 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain DUF4179 PF13786.1 gi|518652114|ref|YP_008141634.1| - 0.043 14.0 2.2 0.058 13.6 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF4389 PF14333.1 gi|518652114|ref|YP_008141634.1| - 0.1 12.3 2.2 0.11 12.1 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) Cornichon PF03311.9 gi|518652114|ref|YP_008141634.1| - 0.25 11.4 6.9 0.58 10.3 4.8 1.7 1 1 0 1 1 1 0 Cornichon protein Wzy_C PF04932.10 gi|518652114|ref|YP_008141634.1| - 0.26 11.0 2.8 0.3 10.8 2.0 1.0 1 0 0 1 1 1 0 O-Antigen ligase Ribosomal_S10 PF00338.17 gi|518652115|ref|YP_008141635.1| - 7.2e-31 105.9 0.0 8e-31 105.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|518652116|ref|YP_008141636.1| - 2.8e-56 189.9 0.1 3.4e-56 189.6 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|518652116|ref|YP_008141636.1| - 1.7e-29 101.8 0.4 6.9e-29 99.9 0.1 2.1 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|518652116|ref|YP_008141636.1| - 9.9e-18 64.0 2.5 3.2e-16 59.2 0.2 3.3 4 0 0 4 4 4 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|518652116|ref|YP_008141636.1| - 2e-07 30.9 0.0 7.5e-07 29.1 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.1 gi|518652116|ref|YP_008141636.1| - 2.5e-06 27.0 0.3 7.4e-06 25.5 0.2 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Miro PF08477.8 gi|518652116|ref|YP_008141636.1| - 0.0001 22.7 0.1 0.00066 20.1 0.0 2.2 1 1 0 1 1 1 1 Miro-like protein Gtr1_RagA PF04670.7 gi|518652116|ref|YP_008141636.1| - 0.0015 17.6 0.0 0.0092 15.1 0.0 1.9 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.18 gi|518652116|ref|YP_008141636.1| - 0.0028 17.5 0.1 2.6 7.8 0.0 2.4 1 1 1 2 2 2 2 Dynamin family PduV-EutP PF10662.4 gi|518652116|ref|YP_008141636.1| - 0.0038 16.7 0.1 0.032 13.7 0.0 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Ras PF00071.17 gi|518652116|ref|YP_008141636.1| - 0.0039 16.6 1.2 0.023 14.1 0.2 2.1 1 1 1 2 2 2 1 Ras family Septin PF00735.13 gi|518652116|ref|YP_008141636.1| - 0.0061 15.6 0.0 0.013 14.5 0.0 1.4 1 0 0 1 1 1 1 Septin Arf PF00025.16 gi|518652116|ref|YP_008141636.1| - 0.0066 15.7 0.0 0.041 13.1 0.0 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family FeoB_N PF02421.13 gi|518652116|ref|YP_008141636.1| - 0.033 13.4 0.1 0.31 10.3 0.1 2.5 2 1 0 2 2 2 0 Ferrous iron transport protein B ArgK PF03308.11 gi|518652116|ref|YP_008141636.1| - 0.11 11.2 1.1 3.8 6.1 0.1 2.5 3 0 0 3 3 3 0 ArgK protein RNA_pol_L_2 PF13656.1 gi|518652117|ref|YP_008141637.1| - 1.1e-17 63.2 0.2 1.5e-17 62.8 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain GPI PF06560.6 gi|518652117|ref|YP_008141637.1| - 0.0012 17.8 0.1 0.0017 17.4 0.1 1.2 1 1 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) MAM33 PF02330.11 gi|518652117|ref|YP_008141637.1| - 0.0053 16.5 0.9 0.0061 16.3 0.6 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF4296 PF14129.1 gi|518652117|ref|YP_008141637.1| - 0.72 10.0 5.4 0.93 9.6 0.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4296) UPF0020 PF01170.13 gi|518652118|ref|YP_008141638.1| - 8.1e-32 110.2 0.0 1.1e-31 109.7 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|518652118|ref|YP_008141638.1| - 5.7e-11 42.2 0.3 1.7e-09 37.4 0.2 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|518652118|ref|YP_008141638.1| - 2.5e-10 40.4 0.0 4.5e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|518652118|ref|YP_008141638.1| - 2e-08 34.0 0.1 1.7e-06 27.7 0.0 2.3 2 0 0 2 2 2 1 DNA methylase Methyltransf_15 PF09445.5 gi|518652118|ref|YP_008141638.1| - 3.5e-05 23.4 0.8 6.1e-05 22.6 0.3 1.6 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase MTS PF05175.9 gi|518652118|ref|YP_008141638.1| - 5.5e-05 22.6 0.0 7.8e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain N6_Mtase PF02384.11 gi|518652118|ref|YP_008141638.1| - 0.011 14.8 0.0 0.04 12.9 0.0 2.0 2 1 0 2 2 2 0 N-6 DNA Methylase Cons_hypoth95 PF03602.10 gi|518652118|ref|YP_008141638.1| - 0.011 15.1 0.0 0.021 14.2 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_18 PF12847.2 gi|518652118|ref|YP_008141638.1| - 0.012 16.2 0.0 1.2 9.7 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain MethyltransfD12 PF02086.10 gi|518652118|ref|YP_008141638.1| - 0.025 14.0 1.5 0.15 11.5 0.0 2.4 2 1 1 3 3 3 0 D12 class N6 adenine-specific DNA methyltransferase tRNA-synt_1 PF00133.17 gi|518652119|ref|YP_008141639.1| - 2.4e-175 583.9 1.1 3.1e-175 583.6 0.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|518652119|ref|YP_008141639.1| - 5.9e-35 120.2 0.5 1.5e-34 118.9 0.3 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|518652119|ref|YP_008141639.1| - 2e-19 69.5 2.6 3.9e-08 32.3 0.1 3.6 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|518652119|ref|YP_008141639.1| - 3.2e-07 29.8 0.0 6.8e-07 28.7 0.0 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.13 gi|518652119|ref|YP_008141639.1| - 1e-06 27.7 0.0 1.3e-05 24.0 0.0 2.5 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 gi|518652119|ref|YP_008141639.1| - 2.3e-05 23.6 0.1 0.00065 18.9 0.0 2.4 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain zf-ribbon_3 PF13248.1 gi|518652119|ref|YP_008141639.1| - 0.00012 21.1 3.1 0.89 8.8 0.0 3.4 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.2 gi|518652119|ref|YP_008141639.1| - 0.0034 17.1 0.2 11 5.9 0.0 3.2 3 0 0 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|518652119|ref|YP_008141639.1| - 0.063 12.7 7.5 1.8 8.1 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|518652119|ref|YP_008141639.1| - 0.14 11.4 0.4 6.8 5.9 0.0 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.5 gi|518652119|ref|YP_008141639.1| - 0.3 11.0 1.9 15 5.6 0.1 2.9 3 0 0 3 3 3 0 Zinc ribbon domain zf-NADH-PPase PF09297.6 gi|518652119|ref|YP_008141639.1| - 2.9 7.4 7.1 3.2 7.3 0.1 2.8 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain YfkD PF14167.1 gi|518652120|ref|YP_008141640.1| - 0.11 11.5 0.6 0.14 11.1 0.4 1.4 1 1 0 1 1 1 0 YfkD-like protein Ribosomal_L44 PF00935.14 gi|518652121|ref|YP_008141641.1| - 4e-30 103.6 4.2 4e-30 103.6 2.9 1.4 1 1 1 2 2 2 1 Ribosomal protein L44 Ribosomal_L33 PF00471.15 gi|518652121|ref|YP_008141641.1| - 0.0018 18.4 7.7 0.0022 18.1 1.6 2.3 2 0 0 2 2 2 1 Ribosomal protein L33 zf-U1 PF06220.7 gi|518652121|ref|YP_008141641.1| - 0.0032 16.9 0.7 0.0032 16.9 0.5 1.6 2 0 0 2 2 2 1 U1 zinc finger zf-FCS PF06467.9 gi|518652121|ref|YP_008141641.1| - 0.024 14.2 1.9 1.1 8.9 0.1 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-Di19 PF05605.7 gi|518652121|ref|YP_008141641.1| - 0.064 13.3 1.2 0.58 10.3 0.1 2.1 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding NOB1_Zn_bind PF08772.6 gi|518652121|ref|YP_008141641.1| - 0.073 12.9 1.3 0.4 10.5 0.1 2.1 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF1272 PF06906.6 gi|518652121|ref|YP_008141641.1| - 0.1 12.4 0.7 6.6 6.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) C1_1 PF00130.17 gi|518652121|ref|YP_008141641.1| - 0.1 12.3 0.6 9.8 5.9 0.0 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-BED PF02892.10 gi|518652121|ref|YP_008141641.1| - 0.2 11.4 2.6 4.5 7.1 0.2 2.2 2 0 0 2 2 2 0 BED zinc finger DUF329 PF03884.9 gi|518652121|ref|YP_008141641.1| - 0.43 10.1 2.2 8.1 6.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF329) zf-H2C2_2 PF13465.1 gi|518652121|ref|YP_008141641.1| - 0.54 10.6 4.0 9.5 6.7 0.6 2.4 2 0 0 2 2 2 0 Zinc-finger double domain zf-C3HC4_3 PF13920.1 gi|518652121|ref|YP_008141641.1| - 0.57 9.9 3.6 12 5.6 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_2 PF13240.1 gi|518652121|ref|YP_008141641.1| - 0.67 9.5 4.3 2.7 7.6 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_jaz PF12171.3 gi|518652121|ref|YP_008141641.1| - 1 9.5 4.9 3.4 7.9 0.7 2.3 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Ribosomal_L34e PF01199.13 gi|518652121|ref|YP_008141641.1| - 1.3 9.2 7.8 0.28 11.4 1.5 2.0 1 1 0 2 2 2 0 Ribosomal protein L34e Tnp_zf-ribbon_2 PF13842.1 gi|518652121|ref|YP_008141641.1| - 1.5 9.3 6.3 15 6.0 0.6 2.4 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-ISL3 PF14690.1 gi|518652121|ref|YP_008141641.1| - 3.2 7.8 7.7 2.2 8.3 2.4 2.5 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Ribosomal_S27e PF01667.12 gi|518652122|ref|YP_008141642.1| - 1.7e-16 59.4 1.2 2.1e-16 59.2 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 A2L_zn_ribbon PF08792.5 gi|518652122|ref|YP_008141642.1| - 0.00048 19.4 3.9 0.00067 19.0 2.7 1.2 1 0 0 1 1 1 1 A2L zinc ribbon domain Zn-ribbon_8 PF09723.5 gi|518652122|ref|YP_008141642.1| - 0.0055 16.6 0.3 0.0092 15.9 0.2 1.3 1 0 0 1 1 1 1 Zinc ribbon domain Zn_Tnp_IS91 PF14319.1 gi|518652122|ref|YP_008141642.1| - 0.0083 15.6 0.1 0.0086 15.5 0.1 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain zinc_ribbon_6 PF14599.1 gi|518652122|ref|YP_008141642.1| - 0.017 14.9 2.9 0.067 13.0 2.0 1.8 1 1 0 1 1 1 0 Zinc-ribbon zf-trcl PF13451.1 gi|518652122|ref|YP_008141642.1| - 0.02 14.4 0.6 0.14 11.8 0.1 2.0 2 0 0 2 2 2 0 Probable zinc-binding domain Lar_restr_allev PF14354.1 gi|518652122|ref|YP_008141642.1| - 0.023 14.9 0.8 1.5 9.2 0.0 2.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|518652122|ref|YP_008141642.1| - 0.035 13.7 0.5 0.04 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518652122|ref|YP_008141642.1| - 0.036 13.3 2.5 0.071 12.4 1.8 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding zf-CHY PF05495.7 gi|518652122|ref|YP_008141642.1| - 0.036 14.2 0.6 0.043 13.9 0.4 1.1 1 0 0 1 1 1 0 CHY zinc finger HypA PF01155.14 gi|518652122|ref|YP_008141642.1| - 0.09 12.4 0.2 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Baculo_ME53 PF06061.6 gi|518652122|ref|YP_008141642.1| - 0.11 11.4 1.5 0.12 11.3 1.0 1.1 1 0 0 1 1 1 0 Baculoviridae ME53 zf-BED PF02892.10 gi|518652122|ref|YP_008141642.1| - 0.18 11.6 4.9 0.54 10.0 0.1 2.1 1 1 1 2 2 2 0 BED zinc finger zf-ribbon_3 PF13248.1 gi|518652122|ref|YP_008141642.1| - 0.21 10.8 1.6 0.48 9.6 1.1 1.7 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_L44 PF00935.14 gi|518652122|ref|YP_008141642.1| - 0.23 11.5 1.9 2.5 8.1 0.5 2.1 1 1 1 2 2 2 0 Ribosomal protein L44 TFIIS_C PF01096.13 gi|518652122|ref|YP_008141642.1| - 0.23 11.1 1.0 2.1 8.0 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DNA_RNApol_7kD PF03604.8 gi|518652122|ref|YP_008141642.1| - 0.28 10.6 5.6 4.2 6.9 3.8 2.1 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit ZZ PF00569.12 gi|518652122|ref|YP_008141642.1| - 0.32 10.5 3.9 3.4 7.2 0.2 2.1 1 1 1 2 2 2 0 Zinc finger, ZZ type Prok-RING_1 PF14446.1 gi|518652122|ref|YP_008141642.1| - 0.39 10.4 3.3 0.69 9.6 2.3 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Zn_ribbon_recom PF13408.1 gi|518652122|ref|YP_008141642.1| - 0.46 10.7 3.3 12 6.2 0.3 2.2 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2_3 PF13878.1 gi|518652122|ref|YP_008141642.1| - 0.69 9.5 3.1 2.6 7.6 0.2 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Desulfoferrod_N PF06397.7 gi|518652122|ref|YP_008141642.1| - 1.8 8.0 6.5 7.2 6.0 0.3 2.4 2 1 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF3797 PF12677.2 gi|518652122|ref|YP_008141642.1| - 2 8.1 6.8 0.41 10.3 1.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-CCHC_6 PF15288.1 gi|518652122|ref|YP_008141642.1| - 8.1 6.2 5.9 2.4 7.8 1.8 1.9 2 0 0 2 2 2 0 Zinc knuckle EIF_2_alpha PF07541.7 gi|518652123|ref|YP_008141643.1| - 3.3e-21 75.1 0.1 7.2e-21 74.0 0.0 1.6 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|518652123|ref|YP_008141643.1| - 2.8e-12 46.5 0.2 5.5e-12 45.6 0.1 1.5 1 0 0 1 1 1 1 S1 RNA binding domain KilA-N PF04383.8 gi|518652123|ref|YP_008141643.1| - 0.62 9.6 5.3 0.31 10.6 1.6 2.0 2 1 0 2 2 2 0 KilA-N domain Nop10p PF04135.7 gi|518652124|ref|YP_008141644.1| - 1.9e-19 69.1 0.2 2e-19 69.0 0.2 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family zf-NADH-PPase PF09297.6 gi|518652124|ref|YP_008141644.1| - 0.0004 19.8 0.2 0.12 11.8 0.0 2.2 2 0 0 2 2 2 2 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|518652124|ref|YP_008141644.1| - 0.0057 16.4 0.5 0.0076 16.0 0.3 1.3 1 1 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.1 gi|518652124|ref|YP_008141644.1| - 0.0074 15.4 0.8 0.34 10.1 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain RecR PF02132.10 gi|518652124|ref|YP_008141644.1| - 0.0081 15.5 1.7 0.01 15.2 1.1 1.2 1 0 0 1 1 1 1 RecR protein Nudix_N_2 PF14803.1 gi|518652124|ref|YP_008141644.1| - 0.013 15.1 1.0 0.26 10.9 0.0 2.2 2 0 0 2 2 2 0 Nudix N-terminal PolC_DP2 PF03833.8 gi|518652124|ref|YP_008141644.1| - 0.014 13.1 0.1 0.014 13.1 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Prot_inhib_II PF02428.10 gi|518652124|ref|YP_008141644.1| - 0.059 13.4 1.8 0.085 12.9 1.3 1.2 1 0 0 1 1 1 0 Potato type II proteinase inhibitor family Elf1 PF05129.8 gi|518652124|ref|YP_008141644.1| - 0.076 12.7 0.2 0.14 11.8 0.2 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Fimbrial_CS1 PF04449.7 gi|518652124|ref|YP_008141644.1| - 0.14 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 CS1 type fimbrial major subunit UPF0547 PF10571.4 gi|518652124|ref|YP_008141644.1| - 0.16 11.6 0.9 14 5.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Cas_CXXC_CXXC PF09706.5 gi|518652124|ref|YP_008141644.1| - 0.19 11.9 2.8 5.2 7.3 0.2 2.1 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_CXXC_CXXC) DZR PF12773.2 gi|518652124|ref|YP_008141644.1| - 0.2 11.4 2.0 0.36 10.6 1.4 1.6 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|518652124|ref|YP_008141644.1| - 0.58 9.7 4.2 1.7 8.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|518652124|ref|YP_008141644.1| - 0.71 9.6 4.9 5.2 6.9 0.2 2.3 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PAC2 PF09754.4 gi|518652125|ref|YP_008141645.1| - 4.5e-44 150.9 0.0 5.3e-44 150.6 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Sec20 PF03908.8 gi|518652125|ref|YP_008141645.1| - 0.084 12.5 0.2 0.19 11.4 0.2 1.5 1 0 0 1 1 1 0 Sec20 DAO PF01266.19 gi|518652127|ref|YP_008141647.1| - 3.3e-16 59.1 0.0 4.9e-08 32.2 0.0 2.6 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|518652127|ref|YP_008141647.1| - 5e-13 48.9 0.0 2.9e-12 46.3 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|518652127|ref|YP_008141647.1| - 4.1e-10 39.0 1.2 6.5e-10 38.4 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|518652127|ref|YP_008141647.1| - 1.4e-08 35.0 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|518652127|ref|YP_008141647.1| - 2.7e-08 32.6 0.1 3.1e-07 29.2 0.2 2.3 3 0 0 3 3 3 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|518652127|ref|YP_008141647.1| - 4.9e-07 29.8 0.9 8.2e-07 29.1 0.6 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|518652127|ref|YP_008141647.1| - 9.6e-07 28.1 0.0 1.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.12 gi|518652127|ref|YP_008141647.1| - 7e-06 25.3 0.1 1.3e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.17 gi|518652127|ref|YP_008141647.1| - 7.1e-06 25.1 0.8 1.4e-05 24.2 0.6 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|518652127|ref|YP_008141647.1| - 7.5e-06 25.8 1.5 1.5e-05 24.9 0.6 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|518652127|ref|YP_008141647.1| - 1.5e-05 25.2 1.4 0.0049 17.2 1.2 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|518652127|ref|YP_008141647.1| - 0.0015 17.5 0.6 0.0039 16.1 0.5 1.6 2 0 0 2 2 2 1 Lycopene cyclase protein 3HCDH_N PF02737.13 gi|518652127|ref|YP_008141647.1| - 0.022 14.3 0.5 0.042 13.4 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Fer4_11 PF13247.1 gi|518652128|ref|YP_008141648.1| - 2.8e-08 33.5 3.0 3.3e-08 33.3 2.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|518652128|ref|YP_008141648.1| - 6.2e-08 32.8 12.0 1e-06 29.0 1.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518652128|ref|YP_008141648.1| - 6e-07 29.1 7.7 8e-07 28.7 5.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518652128|ref|YP_008141648.1| - 6.4e-07 29.5 12.1 6.1e-05 23.2 4.9 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518652128|ref|YP_008141648.1| - 0.00074 19.2 10.8 0.054 13.3 2.7 2.9 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|518652128|ref|YP_008141648.1| - 0.0018 18.7 14.4 0.012 16.1 1.0 2.8 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|518652128|ref|YP_008141648.1| - 0.0022 18.7 5.8 2.6 8.8 0.1 3.0 1 1 2 3 3 3 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|518652128|ref|YP_008141648.1| - 0.0026 17.2 13.0 0.17 11.5 0.6 4.1 3 1 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518652128|ref|YP_008141648.1| - 0.0045 16.8 6.9 1 9.2 0.0 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|518652128|ref|YP_008141648.1| - 0.04 13.9 5.4 0.15 12.0 0.1 2.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|518652128|ref|YP_008141648.1| - 0.12 12.0 7.4 0.56 9.8 1.6 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.2 gi|518652128|ref|YP_008141648.1| - 0.12 12.2 13.3 1.2 9.1 2.7 2.9 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|518652128|ref|YP_008141648.1| - 0.27 11.6 7.3 18 5.7 5.0 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain GCC2_GCC3 PF07699.8 gi|518652128|ref|YP_008141648.1| - 2.2 7.9 7.4 9.5 5.8 5.2 2.2 1 1 0 1 1 1 0 GCC2 and GCC3 Fer4_4 PF12800.2 gi|518652128|ref|YP_008141648.1| - 7.7 7.1 13.3 14 6.3 1.4 3.6 2 2 0 2 2 2 0 4Fe-4S binding domain DUF4358 PF14270.1 gi|518652129|ref|YP_008141649.1| - 0.06 13.2 4.1 0.71 9.7 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4358) Pribosyltran PF00156.22 gi|518652130|ref|YP_008141650.1| - 5.8e-19 68.0 0.1 9.1e-19 67.4 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|518652130|ref|YP_008141650.1| - 0.14 11.3 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Antitoxin-MazE PF04014.13 gi|518652131|ref|YP_008141651.1| - 1.2e-09 37.6 0.2 1.6e-09 37.2 0.1 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE rve PF00665.21 gi|518652132|ref|YP_008141652.1| - 6.8e-22 77.8 0.0 1.7e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518652132|ref|YP_008141652.1| - 6.9e-06 25.5 2.0 0.00027 20.4 1.4 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518652132|ref|YP_008141652.1| - 3.9e-05 24.3 1.4 9.6e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|518652132|ref|YP_008141652.1| - 0.0071 15.9 0.2 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518652132|ref|YP_008141652.1| - 0.014 15.5 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|518652132|ref|YP_008141652.1| - 0.019 14.9 1.1 0.045 13.7 0.8 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652132|ref|YP_008141652.1| - 0.028 13.8 1.5 0.045 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Acyl-CoA_dh_1 PF00441.19 gi|518652134|ref|YP_008141654.1| - 5.2e-36 123.9 0.1 8.3e-36 123.3 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|518652134|ref|YP_008141654.1| - 1.1e-23 83.9 0.0 2.9e-23 82.5 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.14 gi|518652134|ref|YP_008141654.1| - 4.5e-14 51.7 0.2 8.1e-14 50.8 0.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.6 gi|518652134|ref|YP_008141654.1| - 8.6e-07 29.2 0.0 1.4e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain ODV-E18 PF10717.4 gi|518652136|ref|YP_008141656.1| - 0.11 11.9 0.9 0.3 10.5 0.1 1.9 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 ABC_tran PF00005.22 gi|518652137|ref|YP_008141657.1| - 1.3e-18 67.6 0.0 2.2e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|518652137|ref|YP_008141657.1| - 1e-10 41.2 0.7 5.3e-06 25.8 0.0 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|518652137|ref|YP_008141657.1| - 2.6e-07 30.8 17.7 3.1e-07 30.6 4.1 3.3 2 1 1 3 3 3 1 AAA domain AAA_29 PF13555.1 gi|518652137|ref|YP_008141657.1| - 3.2e-05 23.3 0.1 7e-05 22.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|518652137|ref|YP_008141657.1| - 0.00057 20.2 5.3 0.0021 18.3 3.7 2.1 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|518652137|ref|YP_008141657.1| - 0.11 11.6 0.0 0.19 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SbcCD_C PF13558.1 gi|518652137|ref|YP_008141657.1| - 0.11 12.3 0.1 1.7 8.6 0.0 2.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit ABC2_membrane_4 PF12730.2 gi|518652138|ref|YP_008141658.1| - 0.88 8.6 54.6 1.4 8.0 37.9 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein CRPV_capsid PF08762.5 gi|518652139|ref|YP_008141659.1| - 0.042 13.2 4.2 0.046 13.1 2.9 1.1 1 0 0 1 1 1 0 CRPV capsid protein like adh_short PF00106.20 gi|518652140|ref|YP_008141660.1| - 5.9e-21 75.0 0.0 8.3e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518652140|ref|YP_008141660.1| - 3.5e-20 72.8 0.3 4.8e-20 72.3 0.2 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518652140|ref|YP_008141660.1| - 6.3e-10 38.9 0.0 1.4e-09 37.8 0.0 1.5 2 0 0 2 2 2 1 KR domain NAD_binding_7 PF13241.1 gi|518652140|ref|YP_008141660.1| - 0.00024 21.3 0.1 0.00042 20.5 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Polysacc_synt_2 PF02719.10 gi|518652140|ref|YP_008141660.1| - 0.00034 19.6 0.1 0.00045 19.2 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|518652140|ref|YP_008141660.1| - 0.00055 18.7 0.0 0.00075 18.2 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 gi|518652140|ref|YP_008141660.1| - 0.00087 19.3 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding Shikimate_DH PF01488.15 gi|518652140|ref|YP_008141660.1| - 0.0052 16.8 0.2 0.01 15.9 0.2 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Epimerase PF01370.16 gi|518652140|ref|YP_008141660.1| - 0.0056 16.1 0.0 0.0083 15.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family AlaDh_PNT_C PF01262.16 gi|518652140|ref|YP_008141660.1| - 0.017 14.6 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NmrA PF05368.8 gi|518652140|ref|YP_008141660.1| - 0.019 14.2 0.0 0.062 12.5 0.0 1.8 2 0 0 2 2 2 0 NmrA-like family 3HCDH_N PF02737.13 gi|518652140|ref|YP_008141660.1| - 0.043 13.4 0.0 0.08 12.5 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RmlD_sub_bind PF04321.12 gi|518652140|ref|YP_008141660.1| - 0.11 11.3 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Methyltransf_25 PF13649.1 gi|518652140|ref|YP_008141660.1| - 0.16 12.3 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF4231 PF14015.1 gi|518652141|ref|YP_008141661.1| - 0.33 10.9 8.4 0.1 12.5 3.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF3816 PF12822.2 gi|518652141|ref|YP_008141661.1| - 0.47 10.3 21.2 0.62 9.9 14.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) Pox_A14 PF05767.7 gi|518652141|ref|YP_008141661.1| - 8.3 6.4 9.1 7.7 6.5 0.8 2.3 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 DUF4018 PF13210.1 gi|518652141|ref|YP_008141661.1| - 8.7 5.6 12.9 0.31 10.4 3.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4018) MFS_1 PF07690.11 gi|518652142|ref|YP_008141662.1| - 3.5e-44 150.9 78.6 1.1e-35 123.0 35.6 1.6 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652142|ref|YP_008141662.1| - 4.3e-10 38.7 43.5 3.3e-06 25.9 10.9 2.4 1 1 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.1 gi|518652142|ref|YP_008141662.1| - 6.4e-05 21.5 24.8 6.4e-05 21.5 17.2 3.0 1 1 2 3 3 3 1 MFS/sugar transport protein HTH_5 PF01022.15 gi|518652143|ref|YP_008141663.1| - 3.7e-07 29.7 0.1 4.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|518652143|ref|YP_008141663.1| - 0.0026 17.4 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB SnoaL_4 PF13577.1 gi|518652144|ref|YP_008141664.1| - 0.0002 21.2 0.1 0.032 14.1 0.0 2.2 2 0 0 2 2 2 2 SnoaL-like domain DUF3186 PF11382.3 gi|518652144|ref|YP_008141664.1| - 0.061 12.4 0.1 0.1 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3186) Hormone_recep PF00104.25 gi|518652144|ref|YP_008141664.1| - 0.13 11.3 1.6 5.4 6.0 0.2 2.3 2 0 0 2 2 2 0 Ligand-binding domain of nuclear hormone receptor Oxidored_q5_N PF01059.12 gi|518652145|ref|YP_008141665.1| - 2 8.2 11.3 1.9 8.4 7.0 1.6 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Iron_permease PF04120.7 gi|518652145|ref|YP_008141665.1| - 7.4 6.1 6.6 13 5.3 4.6 1.3 1 0 0 1 1 1 0 Low affinity iron permease Peptidase_M20 PF01546.23 gi|518652146|ref|YP_008141666.1| - 9.8e-31 106.7 0.4 1.3e-30 106.3 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518652146|ref|YP_008141666.1| - 1.5e-12 47.2 1.3 2e-12 46.8 0.1 1.8 2 0 0 2 2 2 1 Peptidase dimerisation domain Pro_racemase PF05544.6 gi|518652147|ref|YP_008141667.1| - 2.2e-84 283.0 0.0 2.5e-84 282.9 0.0 1.0 1 0 0 1 1 1 1 Proline racemase PhzC-PhzF PF02567.11 gi|518652147|ref|YP_008141667.1| - 5.1e-07 29.1 0.0 1.4e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 Phenazine biosynthesis-like protein DAP_epimerase PF01678.14 gi|518652147|ref|YP_008141667.1| - 0.0019 18.1 0.0 1.8 8.5 0.0 2.4 2 0 0 2 2 2 2 Diaminopimelate epimerase Methyltransf_31 PF13847.1 gi|518652149|ref|YP_008141669.1| - 7.1e-12 45.1 0.1 1e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652149|ref|YP_008141669.1| - 3.2e-09 37.3 0.0 4.7e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518652149|ref|YP_008141669.1| - 3.6e-09 36.2 0.0 4.4e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|518652149|ref|YP_008141669.1| - 5.1e-08 33.2 0.0 8.6e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518652149|ref|YP_008141669.1| - 6.2e-08 33.0 0.0 1.2e-07 32.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652149|ref|YP_008141669.1| - 1.5e-07 31.2 0.0 2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|518652149|ref|YP_008141669.1| - 4e-05 22.8 0.0 5.5e-05 22.4 0.0 1.2 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|518652149|ref|YP_008141669.1| - 7e-05 22.8 0.0 9.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|518652149|ref|YP_008141669.1| - 0.0012 17.9 0.0 0.0019 17.2 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase CMAS PF02353.15 gi|518652149|ref|YP_008141669.1| - 0.0022 17.1 0.0 0.0027 16.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.1 gi|518652149|ref|YP_008141669.1| - 0.0034 17.0 0.0 0.0048 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.8 gi|518652149|ref|YP_008141669.1| - 0.024 13.9 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_25 PF13649.1 gi|518652149|ref|YP_008141669.1| - 0.047 14.0 0.0 0.09 13.1 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain MFS_1 PF07690.11 gi|518652150|ref|YP_008141670.1| - 6.8e-46 156.5 31.5 6.8e-46 156.5 21.9 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF3270 PF11674.3 gi|518652150|ref|YP_008141670.1| - 0.03 14.3 2.4 0.12 12.4 1.7 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) ATG22 PF11700.3 gi|518652150|ref|YP_008141670.1| - 0.035 12.6 38.5 0.14 10.6 1.0 3.3 2 1 1 3 3 3 0 Vacuole effluxer Atg22 like OATP PF03137.15 gi|518652150|ref|YP_008141670.1| - 6.8 4.6 11.6 0.077 11.0 1.2 2.3 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family DDE_Tnp_1_5 PF13737.1 gi|518652151|ref|YP_008141671.1| - 3.4e-12 46.5 0.0 5.2e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain La PF05383.12 gi|518652151|ref|YP_008141671.1| - 0.027 14.2 0.1 0.1 12.4 0.0 2.0 2 0 0 2 2 2 0 La domain Mga PF05043.8 gi|518652151|ref|YP_008141671.1| - 0.065 13.5 0.1 0.12 12.6 0.1 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_Tnp_1 PF01527.15 gi|518652152|ref|YP_008141672.1| - 2.1e-09 37.1 0.0 2.8e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.1 gi|518652152|ref|YP_008141672.1| - 5.7e-05 23.0 0.2 9.8e-05 22.2 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|518652152|ref|YP_008141672.1| - 0.0005 20.1 0.0 0.00055 20.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.1 gi|518652152|ref|YP_008141672.1| - 0.00079 18.9 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_17 PF12728.2 gi|518652152|ref|YP_008141672.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain rve_3 PF13683.1 gi|518652153|ref|YP_008141673.1| - 1.7e-17 62.6 0.2 7e-17 60.7 0.2 2.1 1 0 0 1 1 1 1 Integrase core domain rve PF00665.21 gi|518652153|ref|YP_008141673.1| - 5.4e-17 62.0 0.0 9.8e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.1 gi|518652153|ref|YP_008141673.1| - 1.2e-12 47.6 2.0 2.8e-12 46.4 1.4 1.6 1 0 0 1 1 1 1 HTH-like domain rve_2 PF13333.1 gi|518652153|ref|YP_008141673.1| - 2.7e-07 30.5 1.1 2.7e-07 30.5 0.7 2.2 3 0 0 3 3 3 1 Integrase core domain DDE_Tnp_IS240 PF13610.1 gi|518652153|ref|YP_008141673.1| - 0.011 15.6 0.7 0.024 14.6 0.1 1.9 2 0 0 2 2 2 0 DDE domain DDE_Tnp_1 PF01609.16 gi|518652154|ref|YP_008141674.1| - 8.4e-06 25.4 1.4 9.3e-06 25.3 1.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain PhoH PF02562.11 gi|518652154|ref|YP_008141674.1| - 0.0048 16.1 0.1 0.0058 15.8 0.1 1.2 1 0 0 1 1 1 1 PhoH-like protein TAFII28 PF04719.9 gi|518652155|ref|YP_008141675.1| - 0.054 13.2 0.0 0.056 13.2 0.0 1.0 1 0 0 1 1 1 0 hTAFII28-like protein conserved region DUF2496 PF10689.4 gi|518652155|ref|YP_008141675.1| - 0.057 13.0 0.1 0.09 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2496) Imm3 PF14425.1 gi|518652155|ref|YP_008141675.1| - 0.1 12.5 0.2 0.11 12.5 0.1 1.0 1 0 0 1 1 1 0 Immunity protein Imm3 DUF217 PF02697.9 gi|518652156|ref|YP_008141676.1| - 2.8e-11 43.4 4.0 3.1e-11 43.3 2.8 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 PIN PF01850.16 gi|518652157|ref|YP_008141677.1| - 1.2e-07 32.0 0.0 2.2e-07 31.2 0.0 1.4 1 1 0 1 1 1 1 PIN domain Tic20 PF09685.5 gi|518652158|ref|YP_008141678.1| - 0.52 10.3 15.5 1.2 9.1 10.7 1.7 1 1 0 1 1 1 0 Tic20-like protein DUF962 PF06127.6 gi|518652158|ref|YP_008141678.1| - 0.9 9.4 3.4 0.72 9.7 1.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF202 PF02656.10 gi|518652158|ref|YP_008141678.1| - 2 8.6 15.4 0.2 11.8 2.6 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF202) SUR7 PF06687.7 gi|518652158|ref|YP_008141678.1| - 2.4 7.6 7.6 3.2 7.2 5.2 1.4 1 1 0 1 1 1 0 SUR7/PalI family YjgP_YjgQ PF03739.9 gi|518652158|ref|YP_008141678.1| - 3.9 6.1 17.9 0.57 8.8 9.3 1.6 1 1 1 2 2 2 0 Predicted permease YjgP/YjgQ family Cyt_c_ox_IV PF12270.3 gi|518652158|ref|YP_008141678.1| - 4.2 7.1 15.3 1.1 9.0 4.4 2.3 1 1 1 2 2 2 0 Cytochrome c oxidase subunit IV DUF4079 PF13301.1 gi|518652158|ref|YP_008141678.1| - 4.9 7.1 8.7 36 4.3 6.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Rep_fac_C PF08542.6 gi|518652159|ref|YP_008141679.1| - 6.8e-18 64.4 0.3 1.4e-17 63.4 0.2 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.1 gi|518652159|ref|YP_008141679.1| - 4.9e-14 52.2 0.0 7.5e-10 38.7 0.0 2.5 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA PF00004.24 gi|518652159|ref|YP_008141679.1| - 1.3e-13 51.3 0.0 2.7e-13 50.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|518652159|ref|YP_008141679.1| - 3.1e-08 32.7 0.1 0.0037 15.9 0.0 2.2 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein TIP49 PF06068.8 gi|518652159|ref|YP_008141679.1| - 8.9e-06 24.6 0.1 0.025 13.2 0.0 2.2 2 0 0 2 2 2 2 TIP49 C-terminus AAA_16 PF13191.1 gi|518652159|ref|YP_008141679.1| - 5.7e-05 23.1 0.1 0.97 9.3 0.0 3.1 1 1 2 3 3 3 2 AAA ATPase domain RuvB_N PF05496.7 gi|518652159|ref|YP_008141679.1| - 8.4e-05 21.7 0.1 0.0021 17.1 0.0 2.4 1 1 1 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|518652159|ref|YP_008141679.1| - 0.00014 22.0 0.2 0.13 12.4 0.0 2.4 1 1 1 2 2 2 2 AAA domain DNA_pol3_delta PF06144.8 gi|518652159|ref|YP_008141679.1| - 0.001 18.6 0.1 0.0022 17.5 0.0 1.7 2 0 0 2 2 2 1 DNA polymerase III, delta subunit IstB_IS21 PF01695.12 gi|518652159|ref|YP_008141679.1| - 0.0011 18.3 0.0 0.0023 17.3 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.1 gi|518652159|ref|YP_008141679.1| - 0.0012 19.1 1.3 0.075 13.3 0.0 2.7 2 1 0 2 2 2 1 AAA domain ResIII PF04851.10 gi|518652159|ref|YP_008141679.1| - 0.0051 16.6 0.1 0.05 13.4 0.1 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_23 PF13476.1 gi|518652159|ref|YP_008141679.1| - 0.0062 16.8 4.4 0.017 15.4 3.0 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|518652159|ref|YP_008141679.1| - 0.01 14.9 0.0 0.5 9.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_19 PF13245.1 gi|518652159|ref|YP_008141679.1| - 0.011 15.4 0.0 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_25 PF13481.1 gi|518652159|ref|YP_008141679.1| - 0.012 15.0 0.0 0.033 13.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain PhoH PF02562.11 gi|518652159|ref|YP_008141679.1| - 0.013 14.7 0.0 0.049 12.8 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein AAA_2 PF07724.9 gi|518652159|ref|YP_008141679.1| - 0.013 15.3 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Arch_ATPase PF01637.13 gi|518652159|ref|YP_008141679.1| - 0.03 14.0 0.1 2.9 7.5 0.0 2.5 1 1 1 2 2 2 0 Archaeal ATPase DUF2258 PF10015.4 gi|518652159|ref|YP_008141679.1| - 0.047 13.5 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) AAA_31 PF13614.1 gi|518652159|ref|YP_008141679.1| - 0.07 13.0 0.1 13 5.6 0.0 2.9 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|518652159|ref|YP_008141679.1| - 0.07 12.8 0.1 0.73 9.5 0.0 2.3 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|518652159|ref|YP_008141679.1| - 0.09 13.6 2.1 0.92 10.3 1.5 2.7 1 1 0 1 1 1 0 AAA domain PBC PF03792.8 gi|518652159|ref|YP_008141679.1| - 0.1 12.2 0.3 0.16 11.6 0.2 1.3 1 0 0 1 1 1 0 PBC domain SNF2_N PF00176.18 gi|518652159|ref|YP_008141679.1| - 0.11 11.2 0.0 8 5.1 0.0 2.4 1 1 1 2 2 2 0 SNF2 family N-terminal domain PIN PF01850.16 gi|518652162|ref|YP_008141682.1| - 1.4e-11 44.7 0.0 1.7e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.4 gi|518652162|ref|YP_008141682.1| - 0.077 13.0 0.1 0.15 12.0 0.1 1.5 1 1 0 1 1 1 0 PIN domain PIN_3 PF13470.1 gi|518652162|ref|YP_008141682.1| - 0.11 13.1 0.0 0.21 12.2 0.0 1.5 1 1 0 1 1 1 0 PIN domain TPR_5 PF12688.2 gi|518652163|ref|YP_008141683.1| - 2.1e-19 69.7 0.0 2.6e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Tetratrico peptide repeat TPR_12 PF13424.1 gi|518652163|ref|YP_008141683.1| - 1.8e-06 27.8 0.3 0.00095 19.0 0.0 3.0 2 1 1 3 3 3 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|518652163|ref|YP_008141683.1| - 2.5e-06 27.4 0.1 0.0052 16.9 0.0 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.12 gi|518652163|ref|YP_008141683.1| - 3.8e-06 26.4 0.5 0.0095 15.7 0.2 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518652163|ref|YP_008141683.1| - 2.9e-05 24.3 0.1 7.3 7.5 0.0 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|518652163|ref|YP_008141683.1| - 5.7e-05 23.3 0.6 0.0083 16.4 0.0 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.1 gi|518652163|ref|YP_008141683.1| - 0.00019 21.0 1.4 0.0082 15.7 0.8 2.6 1 1 1 2 2 2 1 TPR repeat TPR_1 PF00515.23 gi|518652163|ref|YP_008141683.1| - 0.00036 20.0 2.1 0.083 12.5 0.1 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|518652163|ref|YP_008141683.1| - 0.0013 19.3 0.0 1.2 9.8 0.0 2.7 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|518652163|ref|YP_008141683.1| - 0.0022 17.6 0.7 0.19 11.5 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|518652163|ref|YP_008141683.1| - 0.0045 17.3 0.3 6.6 7.4 0.1 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|518652163|ref|YP_008141683.1| - 0.0085 15.1 0.0 0.072 12.1 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|518652163|ref|YP_008141683.1| - 0.022 14.9 0.2 4.1 7.8 0.0 3.6 3 1 0 3 3 3 0 Tetratricopeptide repeat Suf PF05843.9 gi|518652163|ref|YP_008141683.1| - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) DUF217 PF02697.9 gi|518652164|ref|YP_008141684.1| - 3.9e-15 55.8 3.3 4.9e-15 55.5 2.0 1.4 1 1 0 1 1 1 1 Uncharacterized ACR, COG1753 zinc_ribbon_5 PF13719.1 gi|518652167|ref|YP_008141687.1| - 0.00011 21.6 1.9 0.17 11.5 0.2 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518652167|ref|YP_008141687.1| - 0.00014 21.4 1.8 0.19 11.4 0.2 2.1 2 0 0 2 2 2 2 zinc-ribbon domain UPF0547 PF10571.4 gi|518652167|ref|YP_008141687.1| - 0.003 17.2 1.1 0.62 9.8 0.1 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 DNA_RNApol_7kD PF03604.8 gi|518652167|ref|YP_008141687.1| - 0.0092 15.4 1.9 1.9 8.0 0.4 2.3 2 0 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.5 gi|518652167|ref|YP_008141687.1| - 0.011 15.7 1.1 2.4 8.1 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|518652167|ref|YP_008141687.1| - 0.011 14.9 1.5 1 8.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain CpXC PF14353.1 gi|518652167|ref|YP_008141687.1| - 0.011 15.6 0.2 2.9 7.8 0.0 2.0 2 0 0 2 2 2 0 CpXC protein PhnA_Zn_Ribbon PF08274.7 gi|518652167|ref|YP_008141687.1| - 0.014 15.1 0.5 0.097 12.4 0.0 2.0 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Ribosomal_S27e PF01667.12 gi|518652167|ref|YP_008141687.1| - 0.014 14.8 0.5 0.16 11.5 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S27 Prok-RING_1 PF14446.1 gi|518652167|ref|YP_008141687.1| - 0.03 14.0 1.3 2.3 8.0 0.0 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 A2L_zn_ribbon PF08792.5 gi|518652167|ref|YP_008141687.1| - 0.04 13.3 1.2 1.1 8.8 0.0 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF1610 PF07754.6 gi|518652167|ref|YP_008141687.1| - 0.04 14.0 3.7 0.11 12.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-C2H2 PF00096.21 gi|518652167|ref|YP_008141687.1| - 0.04 14.2 2.5 2.1 8.8 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type DZR PF12773.2 gi|518652167|ref|YP_008141687.1| - 0.046 13.5 1.0 0.21 11.4 0.7 1.8 1 1 0 1 1 1 0 Double zinc ribbon DUF866 PF05907.8 gi|518652167|ref|YP_008141687.1| - 0.088 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) Lar_restr_allev PF14354.1 gi|518652167|ref|YP_008141687.1| - 0.11 12.8 0.2 1.1 9.6 0.2 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar ADK_lid PF05191.9 gi|518652167|ref|YP_008141687.1| - 0.11 12.2 1.3 8.8 6.0 0.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-ISL3 PF14690.1 gi|518652167|ref|YP_008141687.1| - 0.12 12.4 3.0 2.3 8.3 0.0 2.4 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HypA PF01155.14 gi|518652167|ref|YP_008141687.1| - 0.13 11.9 0.0 0.16 11.6 0.0 1.3 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_2 PF13240.1 gi|518652167|ref|YP_008141687.1| - 0.13 11.8 5.8 1 8.9 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.13 gi|518652167|ref|YP_008141687.1| - 0.15 11.7 1.9 11 5.7 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF35_N PF12172.3 gi|518652167|ref|YP_008141687.1| - 0.18 11.7 0.6 17 5.4 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.7 gi|518652167|ref|YP_008141687.1| - 0.23 10.7 1.6 5.9 6.2 0.2 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|518652167|ref|YP_008141687.1| - 0.26 10.9 2.0 9.5 5.9 1.4 2.3 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-CCHC PF00098.18 gi|518652167|ref|YP_008141687.1| - 0.27 11.2 5.2 1.4 8.9 0.4 2.2 2 0 0 2 2 2 0 Zinc knuckle Auto_anti-p27 PF06677.7 gi|518652167|ref|YP_008141687.1| - 0.52 10.1 5.8 2.3 8.0 0.1 2.3 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn_Tnp_IS1595 PF12760.2 gi|518652167|ref|YP_008141687.1| - 1.1 9.1 6.0 4.5 7.1 2.2 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|518652167|ref|YP_008141687.1| - 1.1 9.6 3.9 17 5.8 0.1 2.3 2 1 0 2 2 2 0 Zinc-finger double domain zf-C2HC_2 PF13913.1 gi|518652167|ref|YP_008141687.1| - 1.1 8.9 7.7 2.1 8.1 0.6 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF4238 PF14022.1 gi|518652168|ref|YP_008141688.1| - 0.016 14.4 0.9 0.021 14.1 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) DUF445 PF04286.7 gi|518652168|ref|YP_008141688.1| - 0.063 12.8 0.5 0.08 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF2614 PF11023.3 gi|518652169|ref|YP_008141689.1| - 0.00019 21.1 2.1 0.00023 20.9 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2614) EIIC-GAT PF03611.9 gi|518652169|ref|YP_008141689.1| - 0.0022 16.8 1.1 0.0025 16.6 0.8 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component DUF2721 PF11026.3 gi|518652169|ref|YP_008141689.1| - 0.016 14.8 1.9 0.02 14.5 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Claudin_2 PF13903.1 gi|518652169|ref|YP_008141689.1| - 0.017 14.7 1.0 0.02 14.5 0.7 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Cation_ATPase_C PF00689.16 gi|518652169|ref|YP_008141689.1| - 0.024 14.1 1.0 0.03 13.8 0.7 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF1469 PF07332.6 gi|518652169|ref|YP_008141689.1| - 0.039 13.6 1.5 0.048 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF2207 PF09972.4 gi|518652169|ref|YP_008141689.1| - 0.052 12.1 2.7 0.06 11.9 1.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ABC2_membrane PF01061.19 gi|518652169|ref|YP_008141689.1| - 0.057 12.5 4.2 0.07 12.2 2.9 1.0 1 0 0 1 1 1 0 ABC-2 type transporter PIRT PF15099.1 gi|518652169|ref|YP_008141689.1| - 0.058 12.6 0.4 0.07 12.3 0.3 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family RseC_MucC PF04246.7 gi|518652169|ref|YP_008141689.1| - 0.16 11.5 1.2 0.2 11.2 0.8 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC YiaAB PF05360.9 gi|518652169|ref|YP_008141689.1| - 1.6 8.3 9.8 2 8.0 1.5 2.1 2 0 0 2 2 2 0 yiaA/B two helix domain DUF4282 PF14110.1 gi|518652169|ref|YP_008141689.1| - 1.7 8.8 7.0 2.2 8.5 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF3784 PF12650.2 gi|518652169|ref|YP_008141689.1| - 6 6.8 7.9 12 5.8 5.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) DUF4097 PF13349.1 gi|518652169|ref|YP_008141689.1| - 9.1 5.7 8.3 3.9 6.9 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4097) HTH_24 PF13412.1 gi|518652170|ref|YP_008141690.1| - 1.3e-09 37.2 0.3 2.3e-09 36.4 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518652170|ref|YP_008141690.1| - 3.9e-07 29.4 0.1 1.3e-06 27.8 0.0 1.9 1 1 1 2 2 2 1 AsnC-type helix-turn-helix domain HTH_DeoR PF08220.7 gi|518652170|ref|YP_008141690.1| - 1.2e-06 27.9 0.1 2.3e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_5 PF01022.15 gi|518652170|ref|YP_008141690.1| - 3.3e-05 23.4 0.0 6.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|518652170|ref|YP_008141690.1| - 3.9e-05 23.2 0.2 0.00041 19.9 0.1 2.4 2 0 0 2 2 2 1 HTH domain HTH_28 PF13518.1 gi|518652170|ref|YP_008141690.1| - 0.00025 20.9 0.0 0.00044 20.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|518652170|ref|YP_008141690.1| - 0.0005 19.4 0.0 0.0015 17.9 0.0 1.9 1 1 0 1 1 1 1 Sigma-70, region 4 AsnC_trans_reg PF01037.16 gi|518652170|ref|YP_008141690.1| - 0.00081 19.0 0.0 0.0014 18.2 0.0 1.4 1 0 0 1 1 1 1 AsnC family HTH_38 PF13936.1 gi|518652170|ref|YP_008141690.1| - 0.00086 18.8 0.0 0.0023 17.4 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|518652170|ref|YP_008141690.1| - 0.00086 18.8 0.0 0.0021 17.6 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.1 gi|518652170|ref|YP_008141690.1| - 0.0034 17.1 0.1 0.056 13.2 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.2 gi|518652170|ref|YP_008141690.1| - 0.0034 17.0 0.0 0.0074 15.9 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|518652170|ref|YP_008141690.1| - 0.0038 17.0 0.0 0.0083 15.9 0.0 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|518652170|ref|YP_008141690.1| - 0.0073 16.3 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Tnp_ISL3 PF13542.1 gi|518652170|ref|YP_008141690.1| - 0.0089 15.1 0.0 0.02 14.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 Rrf2 PF02082.15 gi|518652170|ref|YP_008141690.1| - 0.011 15.8 0.1 1.6 8.8 0.0 2.3 1 1 1 2 2 2 0 Transcriptional regulator HTH_10 PF04967.7 gi|518652170|ref|YP_008141690.1| - 0.011 15.2 0.0 0.023 14.2 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_3 PF01381.17 gi|518652170|ref|YP_008141690.1| - 0.012 15.3 0.0 0.053 13.3 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix MerR PF00376.18 gi|518652170|ref|YP_008141690.1| - 0.013 15.0 0.0 0.024 14.2 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein GntR PF00392.16 gi|518652170|ref|YP_008141690.1| - 0.014 14.8 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_9 PF08221.6 gi|518652170|ref|YP_008141690.1| - 0.016 15.0 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_40 PF14493.1 gi|518652170|ref|YP_008141690.1| - 0.021 15.0 0.1 0.03 14.5 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain TetR_N PF00440.18 gi|518652170|ref|YP_008141690.1| - 0.022 14.4 0.0 0.044 13.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family NUMOD1 PF07453.8 gi|518652170|ref|YP_008141690.1| - 0.023 14.5 0.0 0.1 12.4 0.0 2.1 2 0 0 2 2 1 0 NUMOD1 domain HTH_17 PF12728.2 gi|518652170|ref|YP_008141690.1| - 0.026 14.7 0.0 0.06 13.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|518652170|ref|YP_008141690.1| - 0.027 13.8 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_29 PF13551.1 gi|518652170|ref|YP_008141690.1| - 0.028 14.5 0.0 0.038 14.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix DUF2042 PF09743.4 gi|518652170|ref|YP_008141690.1| - 0.03 13.6 0.0 0.05 12.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2042) HTH_41 PF14502.1 gi|518652170|ref|YP_008141690.1| - 0.037 13.6 0.0 0.076 12.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_6 PF01418.12 gi|518652170|ref|YP_008141690.1| - 0.078 12.7 0.0 0.17 11.6 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family MerR_1 PF13411.1 gi|518652170|ref|YP_008141690.1| - 0.081 12.7 0.0 0.27 11.0 0.0 1.9 2 0 0 2 2 2 0 MerR HTH family regulatory protein HTH_36 PF13730.1 gi|518652170|ref|YP_008141690.1| - 0.085 13.0 0.1 0.34 11.0 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_Mga PF08280.6 gi|518652170|ref|YP_008141690.1| - 0.088 12.5 1.0 0.28 10.9 0.1 2.2 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain Mga PF05043.8 gi|518652170|ref|YP_008141690.1| - 0.09 13.0 0.1 0.32 11.2 0.0 1.9 2 0 0 2 2 2 0 Mga helix-turn-helix domain SpoIIID PF12116.3 gi|518652170|ref|YP_008141690.1| - 0.099 12.5 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Stage III sporulation protein D TrmB PF01978.14 gi|518652170|ref|YP_008141690.1| - 0.1 12.3 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|518652170|ref|YP_008141690.1| - 0.12 12.1 0.0 0.33 10.6 0.0 1.8 1 0 0 1 1 1 0 MarR family HTH_AraC PF00165.18 gi|518652170|ref|YP_008141690.1| - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_Tnp_IS630 PF01710.11 gi|518652170|ref|YP_008141690.1| - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Transposase AhpC-TSA PF00578.16 gi|518652171|ref|YP_008141691.1| - 2.8e-32 111.0 0.0 4.3e-32 110.3 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|518652171|ref|YP_008141691.1| - 4.6e-16 58.6 0.0 5.7e-16 58.3 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.4 gi|518652171|ref|YP_008141691.1| - 5.6e-10 38.7 0.2 1.5e-09 37.3 0.1 1.7 1 1 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Rubrerythrin PF02915.12 gi|518652172|ref|YP_008141692.1| - 0.0019 18.5 0.7 0.0025 18.1 0.5 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF2382 PF09557.5 gi|518652172|ref|YP_008141692.1| - 0.02 14.8 0.1 0.023 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2382) RNase_H_2 PF13482.1 gi|518652172|ref|YP_008141692.1| - 0.046 13.5 0.1 0.065 13.0 0.0 1.4 1 1 0 1 1 1 0 RNase_H superfamily CCDC155 PF14662.1 gi|518652172|ref|YP_008141692.1| - 0.074 12.6 0.4 0.074 12.6 0.3 1.9 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 Mei5 PF10376.4 gi|518652172|ref|YP_008141692.1| - 0.24 10.8 5.8 0.12 11.8 1.4 1.9 1 1 1 2 2 2 0 Double-strand recombination repair protein Formyl_trans_N PF00551.14 gi|518652173|ref|YP_008141693.1| - 7.4e-44 149.4 0.0 8.7e-44 149.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase Erf4 PF10256.4 gi|518652173|ref|YP_008141693.1| - 0.0099 15.7 0.1 0.025 14.4 0.0 1.7 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family LysE PF01810.13 gi|518652174|ref|YP_008141694.1| - 1.2e-26 93.2 14.3 1.4e-26 92.9 9.9 1.1 1 0 0 1 1 1 1 LysE type translocator DUF1469 PF07332.6 gi|518652174|ref|YP_008141694.1| - 0.18 11.5 0.2 0.18 11.5 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1469) DUF4282 PF14110.1 gi|518652174|ref|YP_008141694.1| - 1.5 9.0 14.8 27 5.0 9.7 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) TerC PF03741.11 gi|518652174|ref|YP_008141694.1| - 2.4 7.5 11.2 0.035 13.5 0.6 2.2 1 1 1 2 2 2 0 Integral membrane protein TerC family OCD_Mu_crystall PF02423.10 gi|518652175|ref|YP_008141695.1| - 8.6e-39 133.1 0.0 1.3e-38 132.5 0.0 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.15 gi|518652175|ref|YP_008141695.1| - 2.6e-07 30.8 0.0 4.6e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|518652175|ref|YP_008141695.1| - 0.0075 16.6 0.0 0.026 14.9 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Asp_Glu_race PF01177.17 gi|518652177|ref|YP_008141697.1| - 1.7e-10 41.1 0.0 2.1e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Radical_SAM PF04055.16 gi|518652178|ref|YP_008141698.1| - 2.2e-16 60.4 0.2 3.5e-16 59.8 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily N_Asn_amidohyd PF14736.1 gi|518652178|ref|YP_008141698.1| - 0.0062 15.4 0.0 0.0094 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein N-terminal asparagine amidohydrolase VitK2_biosynth PF02621.9 gi|518652179|ref|YP_008141699.1| - 1.2e-21 77.1 0.2 1.3e-21 76.9 0.1 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis Radical_SAM PF04055.16 gi|518652180|ref|YP_008141700.1| - 3.5e-17 63.0 0.0 5.6e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|518652180|ref|YP_008141700.1| - 0.00082 19.5 0.0 0.0019 18.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|518652180|ref|YP_008141700.1| - 0.0086 16.0 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF718 PF05336.8 gi|518652181|ref|YP_008141701.1| - 3.8e-24 84.5 0.0 4.2e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF718) ECH PF00378.15 gi|518652182|ref|YP_008141702.1| - 2.4e-42 144.7 0.0 2.7e-42 144.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family ECH_C PF13766.1 gi|518652182|ref|YP_008141702.1| - 0.047 13.8 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 2-enoyl-CoA Hydratase C-terminal region ATP-synt_E PF05680.7 gi|518652183|ref|YP_008141703.1| - 1.1 9.3 4.1 1.1 9.2 2.8 1.1 1 0 0 1 1 1 0 ATP synthase E chain SHMT PF00464.14 gi|518652184|ref|YP_008141704.1| - 3.5e-68 229.8 0.0 4.4e-68 229.4 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase SelA PF03841.8 gi|518652184|ref|YP_008141704.1| - 8.5e-07 28.0 0.1 1.4e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_1_2 PF00155.16 gi|518652184|ref|YP_008141704.1| - 3.2e-06 26.3 0.0 2.4e-05 23.4 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II DUF1282 PF06930.7 gi|518652186|ref|YP_008141706.1| - 0.11 12.1 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) tRNA_deacylase PF04414.7 gi|518652187|ref|YP_008141707.1| - 8.6e-61 204.7 0.2 1e-60 204.5 0.1 1.0 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase PALP PF00291.20 gi|518652188|ref|YP_008141708.1| - 9.2e-45 153.1 0.0 1.1e-44 152.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF1611 PF07755.6 gi|518652189|ref|YP_008141709.1| - 4.3e-95 317.8 0.0 5.1e-95 317.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1611) DUF2064 PF09837.4 gi|518652189|ref|YP_008141709.1| - 0.0053 16.3 0.7 0.81 9.3 0.0 3.2 3 1 1 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2064) DUF367 PF04034.8 gi|518652191|ref|YP_008141711.1| - 1.6e-39 134.3 0.0 2e-39 134.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|518652191|ref|YP_008141711.1| - 0.00011 21.6 0.0 0.00025 20.5 0.0 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Borrelia_lipo_1 PF05714.6 gi|518652191|ref|YP_008141711.1| - 0.046 12.8 0.1 0.17 10.9 0.0 1.9 2 0 0 2 2 2 0 Borrelia burgdorferi virulent strain associated lipoprotein Sugar_tr PF00083.19 gi|518652192|ref|YP_008141712.1| - 3.3e-42 144.6 23.6 1.2e-41 142.7 16.4 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652192|ref|YP_008141712.1| - 4.6e-42 143.9 43.8 1.1e-27 96.7 16.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1228 PF06779.9 gi|518652192|ref|YP_008141712.1| - 0.037 14.0 10.1 0.054 13.5 1.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1228) CTP_synth_N PF06418.9 gi|518652193|ref|YP_008141713.1| - 3.5e-119 396.9 2.3 4.8e-119 396.5 1.6 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|518652193|ref|YP_008141713.1| - 1.3e-45 155.2 0.0 2.1e-45 154.5 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.18 gi|518652193|ref|YP_008141713.1| - 2.4e-07 30.3 0.0 4.3e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.8 gi|518652193|ref|YP_008141713.1| - 2.4e-07 30.4 0.0 1.6e-05 24.4 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 gi|518652193|ref|YP_008141713.1| - 0.0011 18.6 0.0 0.1 12.1 0.0 2.4 2 0 0 2 2 2 1 SNO glutamine amidotransferase family GATase_5 PF13507.1 gi|518652193|ref|YP_008141713.1| - 0.04 12.8 0.0 0.2 10.5 0.0 2.1 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ArgK PF03308.11 gi|518652193|ref|YP_008141713.1| - 0.079 11.7 0.5 0.15 10.7 0.0 1.7 2 0 0 2 2 2 0 ArgK protein SCP2 PF02036.12 gi|518652194|ref|YP_008141714.1| - 2.6e-10 40.5 0.5 2.8e-10 40.3 0.4 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.1 gi|518652194|ref|YP_008141714.1| - 4.9e-08 32.9 0.2 7.6e-08 32.3 0.1 1.3 1 1 0 1 1 1 1 Alkyl sulfatase C-terminal FCH PF00611.18 gi|518652194|ref|YP_008141714.1| - 0.032 14.4 0.3 0.076 13.2 0.2 1.8 1 1 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain RHSP PF07999.6 gi|518652194|ref|YP_008141714.1| - 0.062 11.8 0.2 0.07 11.7 0.1 1.0 1 0 0 1 1 1 0 Retrotransposon hot spot protein Corona_3 PF04694.7 gi|518652194|ref|YP_008141714.1| - 0.067 13.0 0.2 0.16 11.8 0.1 1.7 1 0 0 1 1 1 0 Coronavirus ORF3 protein Lipoprotein_16 PF03923.8 gi|518652194|ref|YP_008141714.1| - 0.072 12.4 3.8 2.1 7.6 0.2 2.1 2 0 0 2 2 2 0 Uncharacterized lipoprotein DUF3379 PF11859.3 gi|518652194|ref|YP_008141714.1| - 0.093 11.8 1.1 0.14 11.2 0.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3379) PolC_DP2 PF03833.8 gi|518652195|ref|YP_008141715.1| - 0 1071.9 11.1 0 1070.8 4.4 2.8 2 1 0 2 2 2 1 DNA polymerase II large subunit DP2 HypA PF01155.14 gi|518652195|ref|YP_008141715.1| - 0.0062 16.2 1.7 0.41 10.3 0.1 2.6 2 0 0 2 2 2 1 Hydrogenase expression/synthesis hypA family DZR PF12773.2 gi|518652195|ref|YP_008141715.1| - 0.021 14.6 7.3 0.059 13.2 0.6 2.4 2 0 0 2 2 2 0 Double zinc ribbon FYVE PF01363.16 gi|518652195|ref|YP_008141715.1| - 0.55 10.1 5.4 2.9 7.8 0.2 2.4 2 0 0 2 2 2 0 FYVE zinc finger zf-UBR PF02207.15 gi|518652195|ref|YP_008141715.1| - 1.1 8.9 5.5 5.5 6.7 0.6 2.4 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) ADK_lid PF05191.9 gi|518652195|ref|YP_008141715.1| - 7.5 6.3 6.9 45 3.8 0.4 3.4 3 0 0 3 3 3 0 Adenylate kinase, active site lid Zn-ribbon_8 PF09723.5 gi|518652195|ref|YP_008141715.1| - 8.7 6.3 10.8 2.1 8.3 0.8 3.1 2 1 0 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|518652195|ref|YP_008141715.1| - 10 5.5 15.3 35 3.8 0.5 4.2 3 1 1 4 4 4 0 TFIIB zinc-binding ATP_bind_1 PF03029.12 gi|518652196|ref|YP_008141716.1| - 1.5e-55 188.3 0.0 1.7e-55 188.2 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.1 gi|518652196|ref|YP_008141716.1| - 0.00014 21.9 0.0 0.00026 21.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|518652196|ref|YP_008141716.1| - 0.00076 19.0 0.0 0.0012 18.3 0.0 1.6 1 1 0 1 1 1 1 AAA-like domain AAA_17 PF13207.1 gi|518652196|ref|YP_008141716.1| - 0.0012 19.6 0.1 0.0047 17.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|518652196|ref|YP_008141716.1| - 0.0079 15.9 0.0 0.015 15.0 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ArsA_ATPase PF02374.10 gi|518652196|ref|YP_008141716.1| - 0.011 14.7 0.0 0.026 13.5 0.0 1.5 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_30 PF13604.1 gi|518652196|ref|YP_008141716.1| - 0.02 14.4 0.0 0.031 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|518652196|ref|YP_008141716.1| - 0.022 14.2 0.0 0.042 13.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|518652196|ref|YP_008141716.1| - 0.057 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain NTPase_1 PF03266.10 gi|518652196|ref|YP_008141716.1| - 0.072 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_16 PF13191.1 gi|518652196|ref|YP_008141716.1| - 0.13 12.1 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain T2SE PF00437.15 gi|518652196|ref|YP_008141716.1| - 0.16 10.8 0.0 0.24 10.2 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ArgK PF03308.11 gi|518652196|ref|YP_008141716.1| - 0.16 10.7 0.0 0.28 9.9 0.0 1.3 1 0 0 1 1 1 0 ArgK protein UbiA PF01040.13 gi|518652197|ref|YP_008141717.1| - 7.5e-25 87.6 23.5 9.2e-25 87.3 16.3 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family ATP-grasp_5 PF13549.1 gi|518652198|ref|YP_008141718.1| - 1.7e-44 151.6 1.1 1.5e-43 148.5 0.7 2.1 1 1 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|518652198|ref|YP_008141718.1| - 9e-43 145.1 0.2 1.8e-42 144.1 0.1 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|518652198|ref|YP_008141718.1| - 8.7e-24 83.9 0.1 2.1e-23 82.6 0.1 1.7 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.14 gi|518652198|ref|YP_008141718.1| - 4.8e-09 36.6 1.3 4.8e-09 36.6 0.9 3.0 3 0 0 3 3 3 1 CoA binding domain ATP-grasp_2 PF08442.5 gi|518652198|ref|YP_008141718.1| - 3.9e-05 23.1 0.6 0.12 11.7 0.0 3.0 3 0 0 3 3 3 2 ATP-grasp domain NAD_Gly3P_dh_N PF01210.18 gi|518652198|ref|YP_008141718.1| - 0.001 18.7 0.1 0.0031 17.2 0.1 1.8 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Rossmann-like PF10727.4 gi|518652198|ref|YP_008141718.1| - 0.039 13.6 0.1 0.14 11.9 0.1 2.0 1 0 0 1 1 1 0 Rossmann-like domain Isochorismatase PF00857.15 gi|518652199|ref|YP_008141719.1| - 1.1e-14 54.7 0.0 1.3e-14 54.5 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family rve_3 PF13683.1 gi|518652199|ref|YP_008141719.1| - 0.045 13.2 0.1 0.12 11.8 0.0 1.7 1 0 0 1 1 1 0 Integrase core domain Glyco_hydro_53 PF07745.8 gi|518652199|ref|YP_008141719.1| - 0.061 12.0 0.0 0.071 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 53 Cyclophil_like PF04126.8 gi|518652199|ref|YP_008141719.1| - 0.1 12.2 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 Cyclophilin-like DUF2784 PF10861.3 gi|518652199|ref|YP_008141719.1| - 0.11 12.3 0.1 3 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of Unknown function (DUF2784) Methyltransf_31 PF13847.1 gi|518652200|ref|YP_008141720.1| - 4.1e-18 65.4 0.0 5e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518652200|ref|YP_008141720.1| - 3.4e-17 62.6 0.0 5.3e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518652200|ref|YP_008141720.1| - 6.7e-14 51.5 0.1 2.7e-13 49.6 0.0 1.7 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|518652200|ref|YP_008141720.1| - 9e-13 48.2 0.0 1.8e-12 47.2 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518652200|ref|YP_008141720.1| - 2.9e-12 46.8 0.0 4.4e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518652200|ref|YP_008141720.1| - 4.5e-09 36.6 0.0 7.3e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518652200|ref|YP_008141720.1| - 0.00041 19.7 0.1 0.00058 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|518652200|ref|YP_008141720.1| - 0.0011 19.5 0.1 0.0018 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|518652200|ref|YP_008141720.1| - 0.0014 17.7 0.0 0.0018 17.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_26 PF13659.1 gi|518652200|ref|YP_008141720.1| - 0.0039 17.1 0.0 0.0076 16.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NanE PF04131.9 gi|518652200|ref|YP_008141720.1| - 0.078 11.9 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase HTH_10 PF04967.7 gi|518652201|ref|YP_008141721.1| - 2.3e-10 39.8 0.0 4.4e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain MORN_2 PF07661.8 gi|518652201|ref|YP_008141721.1| - 0.0036 17.1 1.4 2.8 8.2 0.0 3.6 3 0 0 3 3 3 2 MORN repeat variant Pyr_redox_2 PF07992.9 gi|518652202|ref|YP_008141722.1| - 0.00019 21.3 0.0 0.19 11.5 0.0 2.5 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase UbiA PF01040.13 gi|518652203|ref|YP_008141723.1| - 1.3e-19 70.4 16.7 1.7e-19 70.0 11.6 1.3 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF2752 PF10825.3 gi|518652203|ref|YP_008141723.1| - 0.23 11.5 0.2 0.23 11.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF1422 PF07226.6 gi|518652203|ref|YP_008141723.1| - 7.5 6.3 9.1 1.1 9.0 1.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) Rib_5-P_isom_A PF06026.9 gi|518652204|ref|YP_008141724.1| - 2e-51 173.7 0.1 2.5e-51 173.4 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|518652204|ref|YP_008141724.1| - 7.2e-06 25.7 0.0 0.078 12.6 0.0 2.2 2 0 0 2 2 2 2 DeoR C terminal sensor domain PhoU PF01895.14 gi|518652205|ref|YP_008141725.1| - 7.2e-18 64.8 4.1 1.2e-15 57.7 0.4 2.7 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|518652205|ref|YP_008141725.1| - 1.3e-05 24.8 0.0 3.2e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE DUF1628 PF07790.6 gi|518652206|ref|YP_008141726.1| - 0.3 11.8 1.5 0.56 10.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1628) DUF4131 PF13567.1 gi|518652206|ref|YP_008141726.1| - 0.96 8.8 4.0 1.9 7.8 2.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Tmemb_18A PF09771.4 gi|518652206|ref|YP_008141726.1| - 1.6 8.6 6.8 0.94 9.4 2.9 1.9 1 1 0 2 2 2 0 Transmembrane protein 188 FAD_binding_3 PF01494.14 gi|518652207|ref|YP_008141727.1| - 2.6e-16 59.6 0.0 1.1e-09 37.7 0.0 3.0 1 1 0 2 2 2 2 FAD binding domain Thi4 PF01946.12 gi|518652207|ref|YP_008141727.1| - 6e-06 25.5 0.0 1.1e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.1 gi|518652207|ref|YP_008141727.1| - 7.9e-05 22.6 0.0 0.0002 21.3 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|518652207|ref|YP_008141727.1| - 0.00058 18.8 0.0 0.17 10.7 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein HI0933_like PF03486.9 gi|518652207|ref|YP_008141727.1| - 0.0012 17.4 0.0 0.004 15.6 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein GDI PF00996.13 gi|518652207|ref|YP_008141727.1| - 0.011 14.0 0.0 0.022 13.0 0.0 1.4 1 0 0 1 1 1 0 GDP dissociation inhibitor Trp_halogenase PF04820.9 gi|518652207|ref|YP_008141727.1| - 0.033 12.8 0.0 0.11 11.1 0.0 1.8 2 0 0 2 2 2 0 Tryptophan halogenase EamA PF00892.15 gi|518652208|ref|YP_008141728.1| - 5.1e-30 104.1 41.4 4.9e-17 62.1 10.8 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|518652208|ref|YP_008141728.1| - 2.6e-09 37.2 7.3 2.6e-09 37.2 5.1 3.6 1 1 3 4 4 4 1 Multidrug resistance efflux transporter Sugar_tr PF00083.19 gi|518652209|ref|YP_008141729.1| - 2.5e-47 161.4 31.7 3e-47 161.2 22.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652209|ref|YP_008141729.1| - 1.8e-29 102.5 45.6 4e-25 88.2 25.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518652209|ref|YP_008141729.1| - 3e-05 22.6 10.2 3e-05 22.6 7.1 3.0 2 1 1 3 3 3 1 MFS/sugar transport protein NADH-u_ox-rdase PF10785.4 gi|518652210|ref|YP_008141730.1| - 3 8.1 9.0 23 5.3 0.1 3.9 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit DUF2368 PF10166.4 gi|518652210|ref|YP_008141730.1| - 3.5 7.2 5.0 9.7 5.8 0.1 3.3 3 2 1 4 4 4 0 Uncharacterised conserved protein (DUF2368) DUF2249 PF10006.4 gi|518652211|ref|YP_008141731.1| - 2.1e-13 49.6 0.0 3.5e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) Cupin_2 PF07883.6 gi|518652211|ref|YP_008141731.1| - 0.00061 19.2 0.1 0.0013 18.2 0.0 1.5 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|518652211|ref|YP_008141731.1| - 0.02 14.5 0.0 0.033 13.8 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain Auxin_BP PF02041.11 gi|518652211|ref|YP_008141731.1| - 0.03 13.7 0.0 0.062 12.7 0.0 1.5 2 0 0 2 2 2 0 Auxin binding protein Cupin_1 PF00190.17 gi|518652211|ref|YP_008141731.1| - 0.19 11.1 0.5 0.37 10.2 0.2 1.6 1 1 1 2 2 2 0 Cupin Form-deh_trans PF09163.6 gi|518652212|ref|YP_008141732.1| - 0.025 14.0 0.5 0.073 12.5 0.4 1.8 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane DUF3533 PF12051.3 gi|518652212|ref|YP_008141732.1| - 0.97 8.1 15.0 0.28 9.9 8.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3533) DUF3784 PF12650.2 gi|518652212|ref|YP_008141732.1| - 2.3 8.2 17.4 1.9 8.4 2.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) DUF872 PF05915.7 gi|518652212|ref|YP_008141732.1| - 8.5 6.2 15.8 4.6 7.1 1.9 2.4 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF3185 PF11381.3 gi|518652212|ref|YP_008141732.1| - 9.8 6.0 14.1 2.1 8.1 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3185) HTH_10 PF04967.7 gi|518652213|ref|YP_008141733.1| - 1.9e-16 59.3 0.1 3.1e-16 58.6 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain DUF3766 PF12611.3 gi|518652214|ref|YP_008141734.1| - 0.05 13.1 0.7 0.1 12.1 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3766) RasGAP PF00616.14 gi|518652214|ref|YP_008141734.1| - 0.078 12.6 0.6 1.1 8.9 0.4 2.4 1 1 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase Acid_PPase PF12689.2 gi|518652216|ref|YP_008141736.1| - 1e-07 31.7 0.1 1.8e-07 30.9 0.0 1.4 1 1 0 1 1 1 1 Acid Phosphatase NIF PF03031.13 gi|518652216|ref|YP_008141736.1| - 4.8e-05 23.0 0.3 5.5e-05 22.8 0.2 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.21 gi|518652216|ref|YP_008141736.1| - 0.011 16.1 0.0 0.21 11.9 0.0 2.0 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Mannosyl_trans3 PF11051.3 gi|518652216|ref|YP_008141736.1| - 0.043 13.1 0.1 0.061 12.6 0.1 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative NAD_binding_9 PF13454.1 gi|518652216|ref|YP_008141736.1| - 0.085 12.6 0.1 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 FAD-NAD(P)-binding Acetyltransf_7 PF13508.1 gi|518652217|ref|YP_008141737.1| - 9.7e-09 35.2 0.0 1.6e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518652217|ref|YP_008141737.1| - 6e-06 26.2 0.0 1.2e-05 25.2 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518652217|ref|YP_008141737.1| - 3.9e-05 23.7 0.0 5.5e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|518652217|ref|YP_008141737.1| - 0.00057 19.7 0.0 0.0013 18.5 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|518652217|ref|YP_008141737.1| - 0.041 13.7 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|518652217|ref|YP_008141737.1| - 0.051 13.4 0.0 0.092 12.6 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase TGT PF01702.13 gi|518652218|ref|YP_008141738.1| - 1.4e-41 142.3 0.0 2.1e-41 141.7 0.0 1.2 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.1 gi|518652218|ref|YP_008141738.1| - 5.8e-15 54.8 0.0 1.8e-14 53.3 0.0 1.9 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|518652218|ref|YP_008141738.1| - 2.5e-09 36.7 0.1 2.2e-08 33.7 0.1 2.4 2 0 0 2 2 2 1 PUA domain SEP PF08059.8 gi|518652218|ref|YP_008141738.1| - 0.0075 16.5 0.0 0.038 14.2 0.0 2.2 3 0 0 3 3 3 1 SEP domain ADH_N PF08240.7 gi|518652219|ref|YP_008141739.1| - 2.2e-38 130.3 4.2 3.6e-38 129.6 2.9 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|518652219|ref|YP_008141739.1| - 2.5e-09 36.7 0.0 4.6e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase NAD_binding_3 PF03447.11 gi|518652219|ref|YP_008141739.1| - 0.021 15.1 0.0 0.039 14.3 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|518652219|ref|YP_008141739.1| - 0.042 13.0 0.0 0.066 12.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MarR PF01047.17 gi|518652220|ref|YP_008141740.1| - 7.6e-10 38.3 0.0 1.3e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|518652220|ref|YP_008141740.1| - 1.2e-05 24.8 0.0 1.7e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|518652220|ref|YP_008141740.1| - 4.2e-05 23.7 0.1 5.7e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|518652220|ref|YP_008141740.1| - 0.015 15.0 0.1 0.025 14.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2540 PF10802.3 gi|518652220|ref|YP_008141740.1| - 0.063 12.9 2.1 0.28 10.8 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2540) HTH_34 PF13601.1 gi|518652220|ref|YP_008141740.1| - 0.065 13.2 0.1 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain MFS_1 PF07690.11 gi|518652221|ref|YP_008141741.1| - 3.8e-41 140.9 62.1 3.8e-41 140.9 43.1 3.5 1 1 2 3 3 3 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652221|ref|YP_008141741.1| - 0.00032 19.4 14.2 0.00032 19.4 9.8 3.2 2 1 1 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|518652221|ref|YP_008141741.1| - 0.0005 18.3 5.7 0.0005 18.3 3.9 2.4 2 0 0 2 2 2 1 Transmembrane secretion effector Fzo_mitofusin PF04799.8 gi|518652221|ref|YP_008141741.1| - 0.21 10.9 0.2 0.52 9.6 0.2 1.6 1 0 0 1 1 1 0 fzo-like conserved region MFS_2 PF13347.1 gi|518652221|ref|YP_008141741.1| - 0.51 8.6 45.7 0.089 11.1 5.4 3.4 1 1 2 3 3 3 0 MFS/sugar transport protein ABC_tran PF00005.22 gi|518652222|ref|YP_008141742.1| - 2.6e-33 115.1 0.1 1.9e-15 57.3 0.0 2.7 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.14 gi|518652222|ref|YP_008141742.1| - 2.4e-16 59.6 2.5 2.1e-07 30.4 0.3 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|518652222|ref|YP_008141742.1| - 8.1e-12 45.7 14.1 1.8e-05 24.8 0.8 4.2 2 2 0 2 2 2 2 AAA domain RLI PF04068.10 gi|518652222|ref|YP_008141742.1| - 8.9e-12 44.3 4.3 1.6e-11 43.5 3.0 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.22 gi|518652222|ref|YP_008141742.1| - 2.1e-08 33.4 4.0 2.1e-08 33.4 2.8 1.9 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|518652222|ref|YP_008141742.1| - 2.4e-05 23.9 2.1 2.4e-05 23.9 1.5 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_23 PF13476.1 gi|518652222|ref|YP_008141742.1| - 4.2e-05 23.9 4.1 0.0017 18.7 0.1 2.5 2 1 0 2 2 2 1 AAA domain Fer4_10 PF13237.1 gi|518652222|ref|YP_008141742.1| - 7.5e-05 22.4 4.6 0.0004 20.1 0.1 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|518652222|ref|YP_008141742.1| - 0.00032 20.4 5.3 0.00055 19.7 3.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|518652222|ref|YP_008141742.1| - 0.00033 20.9 1.2 0.00033 20.9 0.8 2.2 1 1 2 3 3 3 2 4Fe-4S dicluster domain AAA_15 PF13175.1 gi|518652222|ref|YP_008141742.1| - 0.00034 19.8 9.8 0.039 12.9 0.0 3.6 2 2 0 4 4 4 2 AAA ATPase domain Fer4_2 PF12797.2 gi|518652222|ref|YP_008141742.1| - 0.00057 19.6 2.7 0.00057 19.6 1.9 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.1 gi|518652222|ref|YP_008141742.1| - 0.0014 18.8 7.7 0.0035 17.5 5.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain SbcCD_C PF13558.1 gi|518652222|ref|YP_008141742.1| - 0.0059 16.5 0.5 9.9 6.1 0.1 3.7 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit Fer4_16 PF13484.1 gi|518652222|ref|YP_008141742.1| - 0.012 16.3 0.1 0.012 16.3 0.1 2.2 2 0 0 2 2 1 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|518652222|ref|YP_008141742.1| - 0.013 15.9 5.3 0.013 15.9 3.7 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_29 PF13555.1 gi|518652222|ref|YP_008141742.1| - 0.032 13.7 0.2 1.3 8.6 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Fer4_8 PF13183.1 gi|518652222|ref|YP_008141742.1| - 0.086 12.8 6.5 0.059 13.4 1.0 1.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518652222|ref|YP_008141742.1| - 0.12 12.7 0.2 0.12 12.7 0.2 2.4 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|518652222|ref|YP_008141742.1| - 0.13 12.6 8.3 0.04 14.3 2.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF258 PF03193.11 gi|518652222|ref|YP_008141742.1| - 0.58 9.3 0.0 0.58 9.3 0.0 2.9 3 0 0 3 3 2 0 Protein of unknown function, DUF258 Fer4_15 PF13459.1 gi|518652222|ref|YP_008141742.1| - 0.65 10.6 6.1 0.095 13.2 0.6 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|518652222|ref|YP_008141742.1| - 3.4 8.2 12.6 0.063 13.6 1.7 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain IpaB_EvcA PF03278.8 gi|518652223|ref|YP_008141743.1| - 0.12 11.5 0.0 0.32 10.2 0.0 1.7 2 0 0 2 2 2 0 IpaB/EvcA family Sugar_tr PF00083.19 gi|518652224|ref|YP_008141744.1| - 5.4e-41 140.6 35.1 9e-41 139.8 24.3 1.3 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652224|ref|YP_008141744.1| - 4.1e-32 111.2 53.4 7.4e-27 93.9 30.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Pterin_bind PF00809.17 gi|518652225|ref|YP_008141745.1| - 1.2e-51 175.0 0.0 1.5e-51 174.7 0.0 1.1 1 0 0 1 1 1 1 Pterin binding enzyme Mg296 PF09644.5 gi|518652225|ref|YP_008141745.1| - 0.012 15.4 0.8 0.025 14.4 0.5 1.5 1 0 0 1 1 1 0 Mg296 protein Radical_SAM PF04055.16 gi|518652226|ref|YP_008141746.1| - 4.6e-15 56.1 0.0 6.4e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Toprim_3 PF13362.1 gi|518652226|ref|YP_008141746.1| - 0.007 16.5 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 Toprim domain INT_SG_DDX_CT_C PF15300.1 gi|518652226|ref|YP_008141746.1| - 0.11 11.9 0.0 0.27 10.7 0.0 1.5 1 0 0 1 1 1 0 INTS6/SAGE1/DDX26B/CT45 C-terminus EAL PF00563.15 gi|518652226|ref|YP_008141746.1| - 0.13 11.7 0.0 0.5 9.8 0.0 1.8 2 0 0 2 2 2 0 EAL domain E1_dh PF00676.15 gi|518652227|ref|YP_008141747.1| - 3.5e-61 206.5 0.0 4.9e-61 206.0 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.16 gi|518652227|ref|YP_008141747.1| - 6.9e-07 28.9 0.0 1.2e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|518652227|ref|YP_008141747.1| - 6.7e-05 21.9 0.0 0.00014 20.9 0.0 1.5 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.19 gi|518652228|ref|YP_008141748.1| - 1.5e-46 158.0 0.0 2e-46 157.7 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.15 gi|518652228|ref|YP_008141748.1| - 5.8e-31 107.0 0.0 1.2e-30 106.0 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain 2-oxoacid_dh PF00198.18 gi|518652229|ref|YP_008141749.1| - 8.1e-68 228.1 0.0 1.2e-67 227.5 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.17 gi|518652229|ref|YP_008141749.1| - 3.2e-21 74.7 5.1 6.4e-21 73.7 3.6 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|518652229|ref|YP_008141749.1| - 1.1e-09 37.8 2.1 0.00013 21.5 0.0 2.9 2 1 1 3 3 3 2 Biotin-lipoyl like E3_binding PF02817.12 gi|518652229|ref|YP_008141749.1| - 1.1e-08 34.6 1.4 2.9e-08 33.1 0.2 2.1 2 0 0 2 2 2 1 e3 binding domain HlyD_3 PF13437.1 gi|518652229|ref|YP_008141749.1| - 0.0099 16.2 1.3 1 9.7 0.1 2.8 1 1 1 2 2 2 1 HlyD family secretion protein RnfC_N PF13375.1 gi|518652229|ref|YP_008141749.1| - 0.019 14.6 0.2 0.047 13.4 0.2 1.6 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain HlyD PF00529.15 gi|518652229|ref|YP_008141749.1| - 0.032 13.5 0.1 0.18 11.1 0.0 2.1 2 0 0 2 2 2 0 HlyD family secretion protein GCV_H PF01597.14 gi|518652229|ref|YP_008141749.1| - 0.037 13.7 0.3 0.094 12.4 0.2 1.7 1 0 0 1 1 1 0 Glycine cleavage H-protein AATase PF07247.7 gi|518652229|ref|YP_008141749.1| - 0.048 12.2 3.8 1.6 7.2 0.5 3.0 3 0 0 3 3 3 0 Alcohol acetyltransferase Pyr_redox_2 PF07992.9 gi|518652230|ref|YP_008141750.1| - 1.7e-32 112.9 11.0 4e-31 108.4 7.6 3.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518652230|ref|YP_008141750.1| - 8.4e-25 86.9 5.9 1.8e-22 79.5 0.5 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|518652230|ref|YP_008141750.1| - 6.1e-19 68.0 0.0 2.2e-18 66.2 0.0 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.1 gi|518652230|ref|YP_008141750.1| - 4.8e-11 43.1 0.7 9.7e-07 29.0 0.3 3.0 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|518652230|ref|YP_008141750.1| - 9.4e-10 37.9 7.8 0.00022 20.2 0.1 3.8 4 0 0 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|518652230|ref|YP_008141750.1| - 1.2e-09 37.5 0.2 8e-06 24.9 0.0 3.7 4 0 0 4 4 4 2 FAD binding domain HI0933_like PF03486.9 gi|518652230|ref|YP_008141750.1| - 3e-09 35.8 4.8 0.0006 18.3 0.0 3.6 3 1 1 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.1 gi|518652230|ref|YP_008141750.1| - 7.1e-08 32.3 0.5 2.3e-05 24.3 0.1 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain UDPG_MGDP_dh_N PF03721.9 gi|518652230|ref|YP_008141750.1| - 3e-05 23.4 1.4 0.00074 18.9 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.17 gi|518652230|ref|YP_008141750.1| - 3.4e-05 22.8 7.2 0.024 13.4 1.2 4.0 2 2 0 3 3 3 2 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|518652230|ref|YP_008141750.1| - 0.00016 20.8 0.4 0.0092 15.0 0.0 2.2 2 0 0 2 2 2 1 FAD binding domain NAD_binding_7 PF13241.1 gi|518652230|ref|YP_008141750.1| - 0.00077 19.6 0.4 1.6 9.0 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding 3HCDH_N PF02737.13 gi|518652230|ref|YP_008141750.1| - 0.001 18.7 0.3 0.036 13.7 0.0 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|518652230|ref|YP_008141750.1| - 0.0011 18.9 0.6 0.54 10.2 0.1 2.5 2 0 0 2 2 2 2 TrkA-N domain AlaDh_PNT_C PF01262.16 gi|518652230|ref|YP_008141750.1| - 0.0012 18.4 0.0 0.0027 17.2 0.0 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.7 gi|518652230|ref|YP_008141750.1| - 0.0025 16.7 0.9 3.1 6.6 0.0 3.1 2 1 1 3 3 3 1 Lycopene cyclase protein NAD_binding_9 PF13454.1 gi|518652230|ref|YP_008141750.1| - 0.014 15.1 5.1 0.22 11.2 0.0 3.1 3 1 1 4 4 3 0 FAD-NAD(P)-binding F420_oxidored PF03807.12 gi|518652230|ref|YP_008141750.1| - 0.017 15.5 1.6 4.3 7.8 0.0 2.7 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent FAD_oxidored PF12831.2 gi|518652230|ref|YP_008141750.1| - 0.026 13.6 0.3 0.14 11.2 0.0 2.1 3 0 0 3 3 3 0 FAD dependent oxidoreductase ApbA PF02558.11 gi|518652230|ref|YP_008141750.1| - 0.039 13.3 1.3 0.32 10.4 0.1 2.6 2 1 1 3 3 3 0 Ketopantoate reductase PanE/ApbA BPL_LplA_LipB PF03099.14 gi|518652231|ref|YP_008141751.1| - 2.8e-09 37.0 0.0 4.5e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Cob_adeno_trans PF01923.13 gi|518652232|ref|YP_008141752.1| - 1e-46 158.7 0.0 1.1e-46 158.5 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase RNA_pol_Rpb6 PF01192.17 gi|518652233|ref|YP_008141753.1| - 1.8e-18 66.0 0.0 1.9e-18 65.9 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb6 tRNA-synt_1g PF09334.6 gi|518652236|ref|YP_008141756.1| - 9e-146 485.5 0.0 1.2e-145 485.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 gi|518652236|ref|YP_008141756.1| - 5e-20 71.0 0.3 1.1e-09 36.9 0.0 5.0 4 1 0 4 4 4 3 tRNA synthetases class I (I, L, M and V) tRNA_bind PF01588.15 gi|518652236|ref|YP_008141756.1| - 8.6e-15 54.3 0.0 1.7e-14 53.4 0.0 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1e PF01406.14 gi|518652236|ref|YP_008141756.1| - 3.2e-09 36.3 0.0 0.0019 17.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|518652236|ref|YP_008141756.1| - 2.2e-05 23.2 0.0 5e-05 22.1 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (K) Anticodon_1 PF08264.8 gi|518652236|ref|YP_008141756.1| - 0.004 16.9 0.1 0.0091 15.7 0.1 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA DZR PF12773.2 gi|518652236|ref|YP_008141756.1| - 0.14 12.0 2.8 0.26 11.1 2.0 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652236|ref|YP_008141756.1| - 0.32 10.2 3.8 0.77 9.0 2.6 1.6 1 0 0 1 1 1 0 zinc-ribbon domain HPP PF04982.8 gi|518652237|ref|YP_008141757.1| - 1.6e-05 24.7 5.1 1.9e-05 24.4 3.5 1.0 1 0 0 1 1 1 1 HPP family DUF1279 PF06916.8 gi|518652238|ref|YP_008141758.1| - 1.2 9.5 4.8 15 5.9 0.8 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) DDE_Tnp_1 PF01609.16 gi|518652239|ref|YP_008141759.1| - 3e-15 56.3 0.0 8e-15 54.9 0.0 1.7 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652239|ref|YP_008141759.1| - 0.00011 21.9 0.0 0.0016 18.1 0.0 2.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.1 gi|518652239|ref|YP_008141759.1| - 0.003 17.7 0.0 0.0068 16.5 0.0 1.6 1 0 0 1 1 1 1 Transposase DDE domain FancD2 PF14631.1 gi|518652239|ref|YP_008141759.1| - 0.044 10.8 0.0 0.067 10.2 0.0 1.2 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Transposase_mut PF00872.13 gi|518652240|ref|YP_008141760.1| - 6e-59 199.5 0.0 7.3e-59 199.2 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518652240|ref|YP_008141760.1| - 8.2e-10 38.7 0.0 1.5e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain HTH_7 PF02796.10 gi|518652240|ref|YP_008141760.1| - 0.12 12.2 0.4 6 6.8 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Potyvirid-P3 PF13608.1 gi|518652241|ref|YP_008141761.1| - 0.11 11.5 0.1 0.13 11.3 0.1 1.0 1 0 0 1 1 1 0 Protein P3 of Potyviral polyprotein Epimerase PF01370.16 gi|518652242|ref|YP_008141762.1| - 5e-42 143.9 0.0 6.4e-42 143.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518652242|ref|YP_008141762.1| - 3.1e-15 55.8 0.0 8.9e-15 54.3 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|518652242|ref|YP_008141762.1| - 1.5e-14 53.6 1.0 6e-13 48.3 0.7 2.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|518652242|ref|YP_008141762.1| - 4.5e-14 51.8 0.0 6.2e-14 51.3 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|518652242|ref|YP_008141762.1| - 4e-12 45.5 0.1 6.7e-10 38.3 0.0 2.3 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 gi|518652242|ref|YP_008141762.1| - 2e-06 27.9 0.0 3.5e-06 27.1 0.0 1.4 1 1 0 1 1 1 1 NADH(P)-binding DUF1059 PF06348.6 gi|518652243|ref|YP_008141763.1| - 2.7e-14 52.6 0.1 2.9e-14 52.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) Plasmid_RAQPRD PF09686.5 gi|518652243|ref|YP_008141763.1| - 0.13 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Plasmid protein of unknown function (Plasmid_RAQPRD) tRNA-synt_His PF13393.1 gi|518652244|ref|YP_008141764.1| - 1.8e-46 158.6 0.0 2.6e-46 158.1 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|518652244|ref|YP_008141764.1| - 5.4e-16 58.6 0.0 2.5e-15 56.4 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|518652244|ref|YP_008141764.1| - 1.4e-10 40.9 0.5 2e-09 37.2 0.0 2.2 2 0 0 2 2 2 1 Anticodon binding domain FlaC_arch PF05377.6 gi|518652244|ref|YP_008141764.1| - 0.06 13.2 0.2 0.23 11.4 0.2 2.0 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) AsnC_trans_reg PF01037.16 gi|518652245|ref|YP_008141765.1| - 7.3e-14 51.2 0.3 8e-14 51.1 0.2 1.0 1 0 0 1 1 1 1 AsnC family YjgP_YjgQ PF03739.9 gi|518652246|ref|YP_008141766.1| - 0.043 12.5 14.8 0.053 12.2 10.3 1.1 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family DUF2304 PF10066.4 gi|518652246|ref|YP_008141766.1| - 3.1 7.6 9.3 7.4 6.4 2.0 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) DUF4282 PF14110.1 gi|518652246|ref|YP_008141766.1| - 5.3 7.2 18.9 1.7 8.9 2.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) TrkA_N PF02254.13 gi|518652247|ref|YP_008141767.1| - 1e-11 44.8 1.3 1.6e-11 44.2 0.3 1.8 1 1 1 2 2 2 1 TrkA-N domain Ion_trans_2 PF07885.11 gi|518652247|ref|YP_008141767.1| - 1.2e-11 44.1 13.9 4.5e-11 42.2 9.4 2.0 1 1 1 2 2 2 1 Ion channel Lig_chan PF00060.21 gi|518652247|ref|YP_008141767.1| - 1.5e-06 28.0 0.2 1.7e-06 27.8 0.1 1.2 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.26 gi|518652247|ref|YP_008141767.1| - 0.0011 18.2 4.0 0.0025 17.0 2.8 1.6 1 1 0 1 1 1 1 Ion transport protein TrkA_C PF02080.16 gi|518652247|ref|YP_008141767.1| - 0.043 13.4 0.0 0.22 11.1 0.0 2.1 2 0 0 2 2 2 0 TrkA-C domain ADH_zinc_N PF00107.21 gi|518652247|ref|YP_008141767.1| - 0.1 12.1 0.0 0.22 11.0 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase GMP_synt_C PF00958.17 gi|518652248|ref|YP_008141768.1| - 1.9e-34 117.2 0.0 6.3e-34 115.5 0.0 1.8 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|518652248|ref|YP_008141768.1| - 6.3e-05 21.9 0.0 0.13 11.0 0.0 2.2 2 0 0 2 2 2 2 NAD synthase QueC PF06508.8 gi|518652248|ref|YP_008141768.1| - 0.00034 19.9 0.0 0.0028 16.9 0.0 2.0 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 gi|518652248|ref|YP_008141768.1| - 0.018 14.5 0.0 0.03 13.8 0.0 1.4 1 1 0 1 1 1 0 PP-loop family PAPS_reduct PF01507.14 gi|518652248|ref|YP_008141768.1| - 0.07 12.9 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Ribosomal_S2 PF00318.15 gi|518652249|ref|YP_008141769.1| - 1.3e-38 132.4 1.4 3.2e-19 68.9 0.0 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 SH3_8 PF13457.1 gi|518652249|ref|YP_008141769.1| - 0.084 13.0 0.0 1.4 9.1 0.0 2.4 2 0 0 2 2 2 0 SH3-like domain tRNA_int_endo PF01974.12 gi|518652250|ref|YP_008141770.1| - 3.9e-18 65.0 2.3 7.1e-16 57.7 0.1 2.7 2 1 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain Atg8 PF02991.11 gi|518652250|ref|YP_008141770.1| - 0.026 14.4 0.1 0.1 12.5 0.0 2.0 2 0 0 2 2 2 0 Autophagy protein Atg8 ubiquitin like tRNA_int_endo_N PF02778.9 gi|518652250|ref|YP_008141770.1| - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 1 0 0 1 1 1 0 tRNA intron endonuclease, N-terminal domain Miro PF08477.8 gi|518652251|ref|YP_008141771.1| - 1.5e-10 41.6 0.4 3e-10 40.6 0.3 1.5 1 0 0 1 1 1 1 Miro-like protein Ras PF00071.17 gi|518652251|ref|YP_008141771.1| - 5.3e-08 32.4 0.6 1e-07 31.5 0.4 1.4 1 1 0 1 1 1 1 Ras family AAA_14 PF13173.1 gi|518652251|ref|YP_008141771.1| - 0.0027 17.5 0.3 0.0044 16.9 0.2 1.4 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|518652251|ref|YP_008141771.1| - 0.016 15.1 1.5 0.071 13.0 1.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.10 gi|518652251|ref|YP_008141771.1| - 0.034 13.8 0.3 0.051 13.2 0.2 1.5 1 1 0 1 1 1 0 NTPase Arf PF00025.16 gi|518652251|ref|YP_008141771.1| - 0.039 13.1 0.1 0.14 11.3 0.1 1.8 1 1 0 1 1 1 0 ADP-ribosylation factor family Gtr1_RagA PF04670.7 gi|518652251|ref|YP_008141771.1| - 0.18 10.9 2.1 1.9 7.6 1.4 2.0 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region Aminotran_1_2 PF00155.16 gi|518652252|ref|YP_008141772.1| - 2e-41 142.1 0.0 2.5e-41 141.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.2 gi|518652252|ref|YP_008141772.1| - 4.1e-08 32.2 0.0 1.4e-07 30.4 0.0 1.8 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase DegT_DnrJ_EryC1 PF01041.12 gi|518652252|ref|YP_008141772.1| - 0.00015 20.8 0.0 0.00035 19.7 0.0 1.5 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|518652252|ref|YP_008141772.1| - 0.012 14.7 0.0 0.018 14.1 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase Pyridoxal_deC PF00282.14 gi|518652252|ref|YP_008141772.1| - 0.027 12.9 0.0 0.19 10.1 0.0 2.0 1 1 1 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain NTPase_I-T PF01931.13 gi|518652253|ref|YP_008141773.1| - 1.2e-23 83.6 0.0 1.9e-23 83.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF84 CTP_transf_2 PF01467.21 gi|518652253|ref|YP_008141773.1| - 8.4e-09 35.6 0.1 3.7e-07 30.3 0.0 2.2 1 1 0 1 1 1 1 Cytidylyltransferase EamA PF00892.15 gi|518652254|ref|YP_008141774.1| - 2.6e-34 117.9 43.4 3.7e-21 75.4 13.2 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|518652254|ref|YP_008141774.1| - 0.43 10.8 32.7 0.025 14.7 6.9 2.9 3 1 1 4 4 4 0 Multidrug resistance efflux transporter DUF59 PF01883.14 gi|518652255|ref|YP_008141775.1| - 1.3e-20 73.1 0.3 1.6e-20 72.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF59 TBP PF00352.16 gi|518652256|ref|YP_008141776.1| - 2.9e-67 222.0 0.3 1e-32 111.3 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|518652256|ref|YP_008141776.1| - 2.4e-06 27.5 0.0 0.037 14.0 0.0 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF3378) CENP-F_C_Rb_bdg PF10490.4 gi|518652256|ref|YP_008141776.1| - 0.017 14.4 0.4 6 6.2 0.1 2.3 2 0 0 2 2 2 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 DUF3252 PF11623.3 gi|518652256|ref|YP_008141776.1| - 0.11 11.9 0.0 14 5.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3252) TruD PF01142.13 gi|518652257|ref|YP_008141777.1| - 2.6e-98 329.1 0.0 2.9e-98 329.0 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) TM1506 PF08973.5 gi|518652258|ref|YP_008141778.1| - 0.013 15.0 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1893) IMPDH PF00478.20 gi|518652259|ref|YP_008141779.1| - 3.2e-141 470.2 5.7 3.7e-141 470.1 3.9 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 gi|518652259|ref|YP_008141779.1| - 1.8e-24 85.2 1.4 4.7e-13 48.6 0.1 2.7 2 0 0 2 2 2 2 CBS domain NMO PF03060.10 gi|518652259|ref|YP_008141779.1| - 2.6e-13 49.8 4.2 6.8e-09 35.3 1.1 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 gi|518652259|ref|YP_008141779.1| - 4.5e-10 38.9 7.7 1.8e-09 36.9 5.1 2.2 2 1 0 2 2 2 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|518652259|ref|YP_008141779.1| - 6e-06 25.6 5.0 0.0012 18.1 0.0 2.6 2 1 0 3 3 3 2 Histidine biosynthesis protein Dus PF01207.12 gi|518652259|ref|YP_008141779.1| - 0.00023 20.0 0.6 0.1 11.4 0.0 3.0 3 0 0 3 3 3 1 Dihydrouridine synthase (Dus) Glu_synthase PF01645.12 gi|518652259|ref|YP_008141779.1| - 0.00026 20.0 4.4 0.00048 19.1 3.0 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase DHO_dh PF01180.16 gi|518652259|ref|YP_008141779.1| - 0.00049 19.1 0.8 0.00049 19.1 0.6 2.0 3 0 0 3 3 3 1 Dihydroorotate dehydrogenase DUF561 PF04481.7 gi|518652259|ref|YP_008141779.1| - 0.0024 16.8 4.7 0.34 9.8 0.5 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF561) EAL PF00563.15 gi|518652259|ref|YP_008141779.1| - 0.0034 16.8 0.1 0.027 13.9 0.1 2.1 2 0 0 2 2 2 1 EAL domain ThiG PF05690.9 gi|518652259|ref|YP_008141779.1| - 0.013 14.6 1.2 0.013 14.6 0.8 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG G3P_antiterm PF04309.7 gi|518652259|ref|YP_008141779.1| - 0.089 11.8 2.8 3.8 6.5 0.0 3.0 3 0 0 3 3 3 0 Glycerol-3-phosphate responsive antiterminator NanE PF04131.9 gi|518652259|ref|YP_008141779.1| - 0.36 9.7 6.3 2.5 7.0 0.4 3.4 2 1 1 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase DNA_pol_E_B PF04042.11 gi|518652260|ref|YP_008141780.1| - 3.7e-13 49.1 0.2 1.1e-12 47.7 0.0 1.8 2 0 0 2 2 2 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|518652260|ref|YP_008141780.1| - 7.1e-09 35.6 0.0 1.3e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|518652260|ref|YP_008141780.1| - 2.9e-05 23.5 1.2 8.4e-05 22.0 0.9 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|518652260|ref|YP_008141780.1| - 0.00014 21.6 0.1 0.0012 18.7 0.1 2.3 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain RICH PF05062.7 gi|518652261|ref|YP_008141781.1| - 0.0015 18.5 6.8 0.019 15.0 0.7 3.0 2 1 1 3 3 3 1 RICH domain DUF445 PF04286.7 gi|518652261|ref|YP_008141781.1| - 0.0034 16.9 2.6 0.0037 16.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF445) SecA_SW PF07516.8 gi|518652261|ref|YP_008141781.1| - 0.0053 16.5 2.8 0.0067 16.2 2.0 1.2 1 0 0 1 1 1 1 SecA Wing and Scaffold domain DUF3387 PF11867.3 gi|518652261|ref|YP_008141781.1| - 0.015 14.2 4.5 0.017 14.1 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3387) Baculo_p24 PF05073.7 gi|518652261|ref|YP_008141781.1| - 0.026 14.1 1.0 0.029 13.9 0.7 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein DrrA_P4M PF14860.1 gi|518652261|ref|YP_008141781.1| - 0.029 14.1 4.8 0.035 13.8 3.4 1.2 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain MIF4G PF02854.14 gi|518652261|ref|YP_008141781.1| - 0.041 13.2 2.0 0.053 12.9 1.4 1.3 1 0 0 1 1 1 0 MIF4G domain VHS PF00790.14 gi|518652261|ref|YP_008141781.1| - 0.092 12.3 1.9 0.085 12.4 0.3 1.8 2 0 0 2 2 2 0 VHS domain Latrotoxin_C PF15658.1 gi|518652261|ref|YP_008141781.1| - 0.093 12.5 3.5 0.33 10.7 2.0 1.9 1 1 1 2 2 2 0 Latrotoxin C-terminal domain Rsbr_N PF08678.5 gi|518652261|ref|YP_008141781.1| - 0.098 12.5 3.0 0.14 12.0 2.1 1.4 1 1 0 1 1 1 0 Rsbr N terminal DUF1160 PF06648.6 gi|518652261|ref|YP_008141781.1| - 0.12 12.1 4.5 0.5 10.1 1.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1160) DUF1722 PF08349.6 gi|518652261|ref|YP_008141781.1| - 0.13 12.1 0.8 0.69 9.7 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1722) Ribosomal_L50 PF10501.4 gi|518652261|ref|YP_008141781.1| - 0.18 11.7 1.3 0.32 10.9 0.2 1.9 2 0 0 2 2 2 0 Ribosomal subunit 39S MinE PF03776.9 gi|518652261|ref|YP_008141781.1| - 0.18 11.2 3.5 3.4 7.2 0.7 2.5 1 1 1 2 2 2 0 Septum formation topological specificity factor MinE MutS_III PF05192.13 gi|518652261|ref|YP_008141781.1| - 0.19 11.4 0.9 0.22 11.2 0.2 1.3 2 0 0 2 2 2 0 MutS domain III PNPase PF03726.9 gi|518652261|ref|YP_008141781.1| - 0.39 11.0 5.0 0.96 9.7 0.2 2.6 1 1 2 3 3 3 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain UNC45-central PF11701.3 gi|518652261|ref|YP_008141781.1| - 0.4 10.3 5.4 5.1 6.7 1.0 2.7 1 1 1 2 2 2 0 Myosin-binding striated muscle assembly central PP2C_C PF07830.8 gi|518652261|ref|YP_008141781.1| - 0.43 10.7 4.7 1.1 9.4 0.8 2.7 1 1 2 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain RGS PF00615.14 gi|518652261|ref|YP_008141781.1| - 0.45 10.6 2.9 5.4 7.1 1.2 2.1 1 1 1 2 2 2 0 Regulator of G protein signaling domain DUF1002 PF06207.6 gi|518652261|ref|YP_008141781.1| - 0.5 9.6 4.2 1.5 8.0 1.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) DUF4413 PF14372.1 gi|518652261|ref|YP_008141781.1| - 0.55 10.2 3.8 6 6.9 0.1 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4413) SRI PF08236.6 gi|518652261|ref|YP_008141781.1| - 0.79 9.7 4.6 0.94 9.4 1.7 2.1 2 1 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain DUF4473 PF14747.1 gi|518652261|ref|YP_008141781.1| - 1.9 8.7 6.5 0.99 9.6 0.4 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4473) GnsAB PF08178.6 gi|518652261|ref|YP_008141781.1| - 4.9 6.8 15.6 1.7 8.3 0.3 3.0 2 1 1 3 3 3 0 GnsA/GnsB family DUF3098 PF11297.3 gi|518652262|ref|YP_008141782.1| - 0.0011 18.6 4.8 0.18 11.5 1.5 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF3098) DUF4097 PF13349.1 gi|518652262|ref|YP_008141782.1| - 0.0072 15.8 2.9 0.036 13.6 0.8 2.4 2 1 0 2 2 2 1 Domain of unknown function (DUF4097) DUF2371 PF10177.4 gi|518652262|ref|YP_008141782.1| - 0.0094 15.8 2.1 0.033 14.0 0.0 2.1 2 0 0 2 2 2 1 Uncharacterised conserved protein (DUF2371) Peptidase_M73 PF12389.3 gi|518652262|ref|YP_008141782.1| - 0.034 13.6 0.2 0.045 13.1 0.2 1.3 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase DUF3185 PF11381.3 gi|518652262|ref|YP_008141782.1| - 0.047 13.4 9.0 0.11 12.3 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) DUF3040 PF11239.3 gi|518652262|ref|YP_008141782.1| - 0.21 11.6 5.2 1.3 9.1 1.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF4064 PF13273.1 gi|518652262|ref|YP_008141782.1| - 0.94 9.6 8.6 1.1 9.3 0.5 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF4064) DUF1206 PF06724.6 gi|518652262|ref|YP_008141782.1| - 2 8.2 8.9 0.66 9.7 1.3 2.6 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1206) MacB_PCD PF12704.2 gi|518652262|ref|YP_008141782.1| - 2.7 7.5 8.8 0.042 13.4 0.8 1.8 1 1 1 2 2 2 0 MacB-like periplasmic core domain MFS_1 PF07690.11 gi|518652263|ref|YP_008141783.1| - 0.0017 17.1 26.2 0.0017 17.1 18.2 3.0 1 1 0 3 3 3 2 Major Facilitator Superfamily Aconitase PF00330.15 gi|518652264|ref|YP_008141784.1| - 2.4e-55 187.8 0.7 4.1e-32 111.2 0.0 2.3 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|518652264|ref|YP_008141784.1| - 0.00014 20.5 0.0 0.0002 20.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Aconitase_C PF00694.14 gi|518652265|ref|YP_008141785.1| - 1.5e-11 44.5 0.0 2.5e-11 43.8 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|518652265|ref|YP_008141785.1| - 0.00062 19.2 0.6 0.058 12.8 0.4 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus MFS_1 PF07690.11 gi|518652266|ref|YP_008141786.1| - 4.2e-40 137.5 84.8 2.6e-36 125.0 32.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652266|ref|YP_008141786.1| - 6.4e-11 41.4 15.4 6.4e-11 41.4 10.6 2.4 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.1 gi|518652266|ref|YP_008141786.1| - 2.5e-05 22.8 22.9 2.5e-05 22.8 15.9 3.0 1 1 2 3 3 3 2 MFS/sugar transport protein OATP PF03137.15 gi|518652266|ref|YP_008141786.1| - 0.0037 15.3 6.5 0.0037 15.3 4.5 3.1 2 1 1 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family DUF1155 PF06633.6 gi|518652266|ref|YP_008141786.1| - 8 5.8 6.7 1.8 7.9 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1155) DUF4083 PF13314.1 gi|518652267|ref|YP_008141787.1| - 0.16 11.8 1.9 0.36 10.6 1.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) PROCT PF08084.6 gi|518652267|ref|YP_008141787.1| - 0.5 10.0 3.7 0.51 10.0 0.5 2.2 1 1 1 2 2 2 0 PROCT (NUC072) domain DUF3139 PF11337.3 gi|518652267|ref|YP_008141787.1| - 0.71 10.1 7.2 1.4 9.2 5.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF4097 PF13349.1 gi|518652267|ref|YP_008141787.1| - 2.5 7.6 11.5 1.1 8.7 6.5 1.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4097) Metallophos_2 PF12850.2 gi|518652269|ref|YP_008141789.1| - 1.6e-24 86.5 0.1 2e-24 86.2 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|518652269|ref|YP_008141789.1| - 7.7e-14 51.5 3.4 2.2e-13 50.0 2.4 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.6 gi|518652269|ref|YP_008141789.1| - 0.00081 17.5 0.3 0.0074 14.3 0.0 2.0 1 1 1 2 2 2 1 Firmicute fructose-1,6-bisphosphatase PhoD PF09423.5 gi|518652269|ref|YP_008141789.1| - 0.11 11.0 0.0 0.13 10.8 0.0 1.2 1 0 0 1 1 1 0 PhoD-like phosphatase HTH_5 PF01022.15 gi|518652270|ref|YP_008141790.1| - 5.9e-13 48.2 0.3 1e-12 47.4 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|518652270|ref|YP_008141790.1| - 3.6e-07 29.8 0.0 5.3e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652270|ref|YP_008141790.1| - 0.00011 21.4 0.1 0.00019 20.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|518652270|ref|YP_008141790.1| - 0.00012 21.7 0.1 0.00024 20.7 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|518652270|ref|YP_008141790.1| - 0.00021 20.8 0.0 0.00031 20.3 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|518652270|ref|YP_008141790.1| - 0.0004 20.6 0.0 0.00066 19.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|518652270|ref|YP_008141790.1| - 0.0012 18.5 0.1 0.0019 17.8 0.0 1.3 1 0 0 1 1 1 1 MarR family TBPIP PF07106.8 gi|518652270|ref|YP_008141790.1| - 0.0028 17.2 0.0 0.0034 16.9 0.0 1.2 1 0 0 1 1 1 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF2250 PF10007.4 gi|518652270|ref|YP_008141790.1| - 0.0059 16.4 0.2 0.0076 16.1 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_34 PF13601.1 gi|518652270|ref|YP_008141790.1| - 0.01 15.8 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|518652270|ref|YP_008141790.1| - 0.025 14.4 0.1 0.039 13.7 0.1 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix Fe_dep_repress PF01325.14 gi|518652270|ref|YP_008141790.1| - 0.027 14.3 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PRANC PF09372.5 gi|518652270|ref|YP_008141790.1| - 0.03 14.2 1.7 0.03 14.2 1.2 1.9 2 0 0 2 2 2 0 PRANC domain Rrf2 PF02082.15 gi|518652270|ref|YP_008141790.1| - 0.046 13.8 0.0 0.068 13.3 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Band_7_1 PF13421.1 gi|518652270|ref|YP_008141790.1| - 0.083 12.3 0.1 0.15 11.5 0.1 1.3 1 1 0 1 1 1 0 SPFH domain-Band 7 family HxlR PF01638.12 gi|518652270|ref|YP_008141790.1| - 0.1 12.2 0.1 0.19 11.3 0.0 1.5 1 1 0 1 1 1 0 HxlR-like helix-turn-helix Phage_min_cap2 PF06152.6 gi|518652270|ref|YP_008141790.1| - 0.11 11.4 0.2 0.13 11.1 0.1 1.0 1 0 0 1 1 1 0 Phage minor capsid protein 2 ArsB PF02040.10 gi|518652271|ref|YP_008141791.1| - 4.6e-142 473.8 39.4 5.5e-142 473.6 27.3 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.11 gi|518652271|ref|YP_008141791.1| - 4.2e-16 58.4 30.7 4.2e-16 58.4 21.3 2.0 1 1 1 2 2 2 1 Citrate transporter DUF4233 PF14017.1 gi|518652271|ref|YP_008141791.1| - 8.2 6.4 16.1 0.12 12.3 1.4 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF4233) HMGL-like PF00682.14 gi|518652272|ref|YP_008141792.1| - 7.5e-56 189.4 0.5 1.1e-55 188.8 0.3 1.2 1 0 0 1 1 1 1 HMGL-like BcrAD_BadFG PF01869.15 gi|518652273|ref|YP_008141793.1| - 8.5e-32 110.5 6.6 1e-31 110.2 4.6 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.15 gi|518652273|ref|YP_008141793.1| - 0.028 14.2 1.3 1.9 8.2 0.1 2.8 2 1 1 3 3 3 0 ROK family FtsA PF14450.1 gi|518652273|ref|YP_008141793.1| - 0.5 10.2 5.3 1.9 8.3 3.7 2.2 1 1 0 1 1 1 0 Cell division protein FtsA PadR PF03551.9 gi|518652274|ref|YP_008141794.1| - 4.2e-06 26.4 0.0 1.1e-05 25.0 0.0 1.7 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|518652274|ref|YP_008141794.1| - 0.00086 19.0 1.9 0.0016 18.1 0.4 2.2 1 1 1 2 2 2 1 Winged helix-turn-helix MotA_activ PF09114.5 gi|518652274|ref|YP_008141794.1| - 0.0012 18.5 0.1 0.0027 17.4 0.0 1.7 2 0 0 2 2 2 1 Transcription factor MotA, activation domain Stork_head PF10264.4 gi|518652274|ref|YP_008141794.1| - 0.01 15.9 0.1 0.037 14.2 0.1 1.8 2 0 0 2 2 2 0 Winged helix Storkhead-box1 domain HTH_27 PF13463.1 gi|518652274|ref|YP_008141794.1| - 0.016 15.4 0.0 0.035 14.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain RuvB_C PF05491.8 gi|518652274|ref|YP_008141794.1| - 0.027 14.1 0.2 0.18 11.4 0.0 2.2 1 1 1 2 2 2 0 Holliday junction DNA helicase ruvB C-terminus Mrr_N PF14338.1 gi|518652274|ref|YP_008141794.1| - 0.057 13.5 0.2 0.17 12.0 0.0 1.8 2 0 0 2 2 2 0 Mrr N-terminal domain ABC_tran PF00005.22 gi|518652275|ref|YP_008141795.1| - 6.4e-33 113.9 0.0 1.4e-32 112.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518652275|ref|YP_008141795.1| - 1.6e-11 44.6 7.3 1.6e-08 34.8 0.0 2.9 2 1 0 3 3 3 2 AAA domain DUF4162 PF13732.1 gi|518652275|ref|YP_008141795.1| - 3.8e-09 36.9 0.5 8e-09 35.8 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|518652275|ref|YP_008141795.1| - 4.5e-07 29.2 6.3 0.0002 20.5 0.0 2.8 3 0 0 3 3 3 2 AAA ATPase domain MMR_HSR1 PF01926.18 gi|518652275|ref|YP_008141795.1| - 2.2e-05 24.4 0.4 5.6e-05 23.0 0.2 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.1 gi|518652275|ref|YP_008141795.1| - 0.00018 21.8 2.8 0.00056 20.2 1.9 1.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|518652275|ref|YP_008141795.1| - 0.00045 20.3 0.1 0.0011 19.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|518652275|ref|YP_008141795.1| - 0.00063 19.0 2.3 3.7 6.7 0.2 3.1 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|518652275|ref|YP_008141795.1| - 0.001 18.2 0.2 0.0019 17.4 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|518652275|ref|YP_008141795.1| - 0.0021 17.5 1.1 0.0043 16.5 0.8 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Miro PF08477.8 gi|518652275|ref|YP_008141795.1| - 0.0063 17.0 0.1 0.02 15.3 0.0 1.9 2 0 0 2 2 2 1 Miro-like protein AAA PF00004.24 gi|518652275|ref|YP_008141795.1| - 0.008 16.3 0.3 0.12 12.5 0.2 2.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ArgK PF03308.11 gi|518652275|ref|YP_008141795.1| - 0.015 14.0 0.6 0.027 13.2 0.4 1.3 1 0 0 1 1 1 0 ArgK protein Zeta_toxin PF06414.7 gi|518652275|ref|YP_008141795.1| - 0.024 13.7 0.2 0.059 12.4 0.1 1.6 2 0 0 2 2 2 0 Zeta toxin AAA_14 PF13173.1 gi|518652275|ref|YP_008141795.1| - 0.1 12.5 0.4 4.1 7.3 0.0 2.8 2 1 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|518652275|ref|YP_008141795.1| - 0.1 12.0 1.1 0.53 9.6 0.3 2.0 1 1 0 2 2 2 0 AAA-like domain SbcCD_C PF13558.1 gi|518652275|ref|YP_008141795.1| - 0.11 12.3 0.0 0.75 9.7 0.0 2.2 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit ABC2_membrane PF01061.19 gi|518652276|ref|YP_008141796.1| - 6.4e-32 110.4 24.2 6.4e-32 110.4 16.8 1.9 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|518652276|ref|YP_008141796.1| - 5.2e-17 61.8 30.8 5.2e-17 61.8 21.4 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|518652276|ref|YP_008141796.1| - 4.9e-05 22.6 32.2 0.00015 21.0 22.2 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein SpecificRecomb PF10136.4 gi|518652276|ref|YP_008141796.1| - 0.00096 17.3 2.8 0.0013 16.8 1.9 1.2 1 0 0 1 1 1 1 Site-specific recombinase YrhC PF14143.1 gi|518652276|ref|YP_008141796.1| - 8.3 6.4 8.7 4.3 7.3 2.3 2.5 2 0 0 2 2 2 0 YrhC-like protein AA_kinase PF00696.23 gi|518652277|ref|YP_008141797.1| - 1.9e-29 102.9 1.5 2.3e-29 102.6 1.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family eRF1_2 PF03464.10 gi|518652278|ref|YP_008141798.1| - 3.3e-34 118.0 0.1 7.4e-34 116.9 0.1 1.6 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|518652278|ref|YP_008141798.1| - 5.5e-27 94.2 0.0 1.8e-26 92.6 0.0 1.9 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|518652278|ref|YP_008141798.1| - 1e-23 83.3 0.0 2e-23 82.4 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 TF_Zn_Ribbon PF08271.7 gi|518652278|ref|YP_008141798.1| - 0.011 15.0 3.0 0.032 13.5 2.1 1.9 1 0 0 1 1 1 0 TFIIB zinc-binding Rad50_zn_hook PF04423.9 gi|518652278|ref|YP_008141798.1| - 5.3 6.5 9.1 6.2 6.3 0.0 5.0 6 0 0 6 6 6 0 Rad50 zinc hook motif TrkA_N PF02254.13 gi|518652279|ref|YP_008141799.1| - 7.3e-11 42.0 0.4 7.3e-11 42.0 0.3 2.2 2 0 0 2 2 2 1 TrkA-N domain Ion_trans_2 PF07885.11 gi|518652279|ref|YP_008141799.1| - 3.8e-10 39.3 6.9 6.8e-10 38.5 4.8 1.4 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.26 gi|518652279|ref|YP_008141799.1| - 0.0013 18.0 2.6 0.002 17.4 1.8 1.3 1 0 0 1 1 1 1 Ion transport protein BK_channel_a PF03493.13 gi|518652279|ref|YP_008141799.1| - 0.0049 16.7 0.0 0.021 14.7 0.0 2.0 2 0 0 2 2 2 1 Calcium-activated BK potassium channel alpha subunit AAA PF00004.24 gi|518652280|ref|YP_008141800.1| - 1.2e-100 332.8 0.0 5.2e-49 165.8 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|518652280|ref|YP_008141800.1| - 4e-22 77.9 1.4 3.3e-21 75.0 1.5 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|518652280|ref|YP_008141800.1| - 1.8e-16 60.5 0.0 4.1e-07 30.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|518652280|ref|YP_008141800.1| - 6.1e-15 54.9 0.0 6.6e-07 28.6 0.0 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_5 PF07728.9 gi|518652280|ref|YP_008141800.1| - 8e-14 51.5 0.1 1.5e-05 24.7 0.0 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|518652280|ref|YP_008141800.1| - 5.5e-13 49.2 0.8 0.00022 21.3 0.0 4.2 3 2 0 3 3 2 2 AAA domain AAA_16 PF13191.1 gi|518652280|ref|YP_008141800.1| - 6.2e-13 49.1 0.0 1.4e-05 25.1 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain AAA_14 PF13173.1 gi|518652280|ref|YP_008141800.1| - 2.6e-12 46.7 0.0 3.6e-06 26.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.8 gi|518652280|ref|YP_008141800.1| - 8.1e-12 44.5 0.9 0.0001 21.1 0.0 3.5 3 0 0 3 3 3 2 TIP49 C-terminus AAA_17 PF13207.1 gi|518652280|ref|YP_008141800.1| - 7.8e-11 42.8 0.0 0.00042 21.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|518652280|ref|YP_008141800.1| - 9.9e-10 38.4 0.0 0.00027 20.8 0.0 2.8 3 0 0 3 3 2 2 AAA domain Zeta_toxin PF06414.7 gi|518652280|ref|YP_008141800.1| - 1.8e-09 37.0 0.0 0.00052 19.1 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_19 PF13245.1 gi|518652280|ref|YP_008141800.1| - 3.7e-09 36.2 2.8 0.00081 19.0 0.4 2.7 2 0 0 2 2 2 2 Part of AAA domain AAA_18 PF13238.1 gi|518652280|ref|YP_008141800.1| - 1.5e-08 35.0 0.1 0.0049 17.1 0.0 3.6 4 0 0 4 4 3 2 AAA domain Sigma54_activat PF00158.21 gi|518652280|ref|YP_008141800.1| - 7.1e-08 32.1 0.1 0.045 13.2 0.0 4.1 2 2 0 2 2 2 2 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|518652280|ref|YP_008141800.1| - 1.3e-07 31.2 0.8 0.0059 16.0 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein Sigma54_activ_2 PF14532.1 gi|518652280|ref|YP_008141800.1| - 5.6e-07 29.6 0.0 0.022 14.8 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.1 gi|518652280|ref|YP_008141800.1| - 8.4e-07 29.0 0.0 0.041 13.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.6 gi|518652280|ref|YP_008141800.1| - 9.2e-07 28.5 0.0 0.016 14.8 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|518652280|ref|YP_008141800.1| - 1.4e-06 28.3 0.0 0.077 13.1 0.0 2.7 2 0 0 2 2 2 2 RNA helicase Mg_chelatase PF01078.16 gi|518652280|ref|YP_008141800.1| - 2.1e-06 27.0 0.2 0.048 12.8 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI CDC48_2 PF02933.12 gi|518652280|ref|YP_008141800.1| - 5.2e-06 26.0 0.1 1.5e-05 24.5 0.1 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 DUF2075 PF09848.4 gi|518652280|ref|YP_008141800.1| - 6.7e-06 25.3 0.0 0.038 12.9 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Arch_ATPase PF01637.13 gi|518652280|ref|YP_008141800.1| - 7.6e-06 25.7 0.0 0.63 9.7 0.0 3.6 2 1 1 3 3 3 2 Archaeal ATPase AAA_25 PF13481.1 gi|518652280|ref|YP_008141800.1| - 1.1e-05 24.9 7.2 0.65 9.3 0.1 4.1 2 2 1 4 4 4 2 AAA domain KaiC PF06745.8 gi|518652280|ref|YP_008141800.1| - 1.7e-05 24.0 3.0 0.42 9.6 0.0 4.0 2 2 2 4 4 4 2 KaiC SKI PF01202.17 gi|518652280|ref|YP_008141800.1| - 5e-05 23.2 0.0 0.31 10.8 0.0 2.6 2 0 0 2 2 2 2 Shikimate kinase T2SE PF00437.15 gi|518652280|ref|YP_008141800.1| - 5.9e-05 22.0 0.7 2.3 7.0 0.0 3.8 3 1 1 4 4 4 2 Type II/IV secretion system protein PhoH PF02562.11 gi|518652280|ref|YP_008141800.1| - 7.4e-05 22.0 0.6 0.46 9.6 0.0 2.9 2 0 0 2 2 2 2 PhoH-like protein ABC_tran PF00005.22 gi|518652280|ref|YP_008141800.1| - 0.00016 22.0 0.0 0.44 10.8 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_24 PF13479.1 gi|518652280|ref|YP_008141800.1| - 0.00018 21.1 0.1 0.055 13.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|518652280|ref|YP_008141800.1| - 0.0002 21.1 3.3 2.5 7.7 0.0 4.3 2 2 2 4 4 4 1 NTPase AAA_11 PF13086.1 gi|518652280|ref|YP_008141800.1| - 0.0003 20.4 0.0 0.4 10.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|518652280|ref|YP_008141800.1| - 0.00031 19.6 0.0 0.51 9.1 0.0 2.5 3 0 0 3 3 2 2 NB-ARC domain DUF815 PF05673.8 gi|518652280|ref|YP_008141800.1| - 0.00035 19.5 0.0 0.27 10.1 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.7 gi|518652280|ref|YP_008141800.1| - 0.00059 19.5 0.2 2.1 7.9 0.0 3.2 4 0 0 4 4 3 2 NACHT domain ResIII PF04851.10 gi|518652280|ref|YP_008141800.1| - 0.00075 19.3 0.0 1.7 8.3 0.0 2.8 3 0 0 3 3 3 2 Type III restriction enzyme, res subunit Cytidylate_kin2 PF13189.1 gi|518652280|ref|YP_008141800.1| - 0.00082 19.3 0.0 0.15 11.9 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_30 PF13604.1 gi|518652280|ref|YP_008141800.1| - 0.0013 18.3 0.5 1.7 8.2 0.0 3.1 3 0 0 3 3 2 1 AAA domain Parvo_NS1 PF01057.12 gi|518652280|ref|YP_008141800.1| - 0.0015 17.4 0.2 0.93 8.2 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ATP-synt_ab PF00006.20 gi|518652280|ref|YP_008141800.1| - 0.0019 17.7 0.0 0.58 9.6 0.0 2.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain UPF0079 PF02367.12 gi|518652280|ref|YP_008141800.1| - 0.0034 17.0 0.1 1.8 8.2 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Bac_DnaA PF00308.13 gi|518652280|ref|YP_008141800.1| - 0.01 15.4 0.0 0.33 10.5 0.0 2.7 2 2 0 2 2 2 0 Bacterial dnaA protein Viral_helicase1 PF01443.13 gi|518652280|ref|YP_008141800.1| - 0.032 13.7 0.0 1.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase KAP_NTPase PF07693.9 gi|518652280|ref|YP_008141800.1| - 0.032 13.2 0.4 10 4.9 0.0 3.3 2 2 2 4 4 4 0 KAP family P-loop domain Ribosomal_L7Ae PF01248.21 gi|518652280|ref|YP_008141800.1| - 0.068 12.6 0.1 15 5.1 0.0 2.5 2 0 0 2 2 2 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPT PF07931.7 gi|518652280|ref|YP_008141800.1| - 0.072 12.7 0.0 1.6 8.3 0.0 2.5 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein IPT PF01745.11 gi|518652280|ref|YP_008141800.1| - 0.088 11.9 0.0 4.8 6.2 0.0 2.3 2 0 0 2 2 2 0 Isopentenyl transferase DEAD PF00270.24 gi|518652280|ref|YP_008141800.1| - 0.11 11.9 1.4 44 3.5 0.0 3.5 2 2 2 4 4 4 0 DEAD/DEAH box helicase DUF202 PF02656.10 gi|518652281|ref|YP_008141801.1| - 0.11 12.6 1.3 0.95 9.7 0.9 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF202) GHMP_kinases_N PF00288.21 gi|518652283|ref|YP_008141803.1| - 1.2e-12 47.7 1.5 2.1e-12 46.9 1.0 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|518652283|ref|YP_008141803.1| - 2e-05 24.7 0.0 4.5e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal Cys_Met_Meta_PP PF01053.15 gi|518652284|ref|YP_008141804.1| - 4e-107 357.8 0.0 4.7e-107 357.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|518652284|ref|YP_008141804.1| - 1.2e-07 30.8 0.1 3.2e-07 29.4 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V AAA_17 PF13207.1 gi|518652285|ref|YP_008141805.1| - 4.1e-08 34.0 0.1 9.6e-08 32.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518652285|ref|YP_008141805.1| - 6.9e-07 29.6 0.1 1e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|518652285|ref|YP_008141805.1| - 0.00016 21.5 0.0 0.00037 20.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|518652285|ref|YP_008141805.1| - 0.0002 20.4 0.0 0.00025 20.1 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin ADK PF00406.17 gi|518652285|ref|YP_008141805.1| - 0.0057 16.5 0.0 0.009 15.8 0.0 1.6 1 1 0 1 1 1 1 Adenylate kinase RuvB_N PF05496.7 gi|518652285|ref|YP_008141805.1| - 0.013 14.6 0.1 0.026 13.5 0.0 1.5 2 0 0 2 2 2 0 Holliday junction DNA helicase ruvB N-terminus RNA_helicase PF00910.17 gi|518652285|ref|YP_008141805.1| - 0.056 13.6 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA PF00004.24 gi|518652285|ref|YP_008141805.1| - 0.098 12.8 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Sod_Fe_C PF02777.13 gi|518652286|ref|YP_008141806.1| - 7.9e-26 89.9 0.1 1.3e-25 89.2 0.1 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|518652286|ref|YP_008141806.1| - 9.9e-09 35.3 0.7 2.3e-08 34.1 0.1 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DUF4281 PF14108.1 gi|518652286|ref|YP_008141806.1| - 0.00088 19.3 0.0 0.0019 18.2 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4281) DUF1477 PF07346.6 gi|518652287|ref|YP_008141807.1| - 0.0002 21.3 0.2 0.00042 20.3 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1477) RTX_C PF08339.5 gi|518652287|ref|YP_008141807.1| - 0.05 13.3 0.0 0.086 12.5 0.0 1.4 1 0 0 1 1 1 0 RTX C-terminal domain CEP44 PF15007.1 gi|518652287|ref|YP_008141807.1| - 0.096 12.3 1.9 0.32 10.7 0.1 2.2 1 1 0 2 2 2 0 Centrosomal spindle body, CEP44 ThiI PF02568.9 gi|518652288|ref|YP_008141808.1| - 7.6e-42 142.9 0.0 1.4e-41 142.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|518652288|ref|YP_008141808.1| - 6.8e-14 51.9 0.5 2.1e-13 50.3 0.0 1.9 2 0 0 2 2 2 1 THUMP domain Rhodanese PF00581.15 gi|518652288|ref|YP_008141808.1| - 3.1e-11 43.6 0.0 5e-09 36.5 0.0 2.6 2 0 0 2 2 2 1 Rhodanese-like domain QueC PF06508.8 gi|518652288|ref|YP_008141808.1| - 0.0017 17.6 0.0 0.13 11.5 0.0 2.7 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC Baculo_LEF5 PF04838.7 gi|518652288|ref|YP_008141808.1| - 0.17 11.6 3.3 0.65 9.7 0.3 2.6 2 1 0 2 2 2 0 Baculoviridae late expression factor 5 FMN_red PF03358.10 gi|518652289|ref|YP_008141809.1| - 7.9e-38 129.3 0.0 9.6e-38 129.0 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|518652289|ref|YP_008141809.1| - 5e-07 29.4 0.0 6.1e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold DUF77 PF01910.12 gi|518652290|ref|YP_008141810.1| - 6.5e-21 73.8 0.1 7.1e-21 73.6 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF77 Antimicrobial_8 PF08103.6 gi|518652290|ref|YP_008141810.1| - 0.044 13.7 0.1 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 Uperin family MR_MLE_C PF13378.1 gi|518652291|ref|YP_008141811.1| - 2.5e-22 78.9 0.0 3.9e-22 78.3 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE PF01188.16 gi|518652291|ref|YP_008141811.1| - 2.8e-11 43.7 0.0 5.1e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MR_MLE_N PF02746.11 gi|518652291|ref|YP_008141811.1| - 4.9e-10 39.4 0.0 9e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain V_ATPase_I PF01496.14 gi|518652292|ref|YP_008141812.1| - 1.2e-59 202.0 37.1 6.1e-40 136.8 13.3 3.9 1 1 2 3 3 3 3 V-type ATPase 116kDa subunit family DUF3834 PF12916.2 gi|518652293|ref|YP_008141813.1| - 0.029 13.3 0.9 0.033 13.1 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3834) FerA PF08165.6 gi|518652293|ref|YP_008141813.1| - 0.043 13.4 3.2 0.4 10.3 0.8 2.5 1 1 2 3 3 3 0 FerA (NUC095) domain Foie-gras_1 PF11817.3 gi|518652293|ref|YP_008141813.1| - 0.046 13.1 0.8 0.054 12.9 0.6 1.2 1 0 0 1 1 1 0 Foie gras liver health family 1 DREPP PF05558.7 gi|518652293|ref|YP_008141813.1| - 0.07 12.9 9.3 0.086 12.6 6.5 1.2 1 0 0 1 1 1 0 DREPP plasma membrane polypeptide Lipase PF00151.14 gi|518652293|ref|YP_008141813.1| - 0.073 12.2 2.4 0.071 12.3 1.7 1.1 1 0 0 1 1 1 0 Lipase COG5 PF10392.4 gi|518652293|ref|YP_008141813.1| - 0.092 12.7 3.1 0.17 11.8 1.2 1.6 1 1 0 1 1 1 0 Golgi transport complex subunit 5 RPOL_N PF14700.1 gi|518652293|ref|YP_008141813.1| - 0.099 11.8 4.0 0.11 11.6 2.8 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase N-terminal PEPcase_2 PF14010.1 gi|518652293|ref|YP_008141813.1| - 0.1 10.8 4.9 0.12 10.6 3.4 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase OS-D PF03392.8 gi|518652293|ref|YP_008141813.1| - 0.11 12.5 5.1 0.14 12.1 3.1 1.6 1 1 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Ada3 PF10198.4 gi|518652293|ref|YP_008141813.1| - 0.13 12.0 9.9 0.17 11.6 6.8 1.2 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 Aconitase_C PF00694.14 gi|518652293|ref|YP_008141813.1| - 0.23 11.5 4.8 0.32 11.1 2.6 1.6 1 1 1 2 2 2 0 Aconitase C-terminal domain Mitofilin PF09731.4 gi|518652293|ref|YP_008141813.1| - 0.28 9.7 14.8 0.34 9.5 10.2 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein V-ATPase_G PF03179.10 gi|518652293|ref|YP_008141813.1| - 0.39 11.0 16.6 0.77 10.0 9.3 2.0 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF3573 PF12097.3 gi|518652293|ref|YP_008141813.1| - 0.56 8.7 7.8 0.56 8.7 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF3837 PF12939.2 gi|518652293|ref|YP_008141813.1| - 0.59 10.1 6.7 0.35 10.8 2.7 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) GrpE PF01025.14 gi|518652293|ref|YP_008141813.1| - 0.73 9.3 10.8 0.93 9.0 7.5 1.2 1 0 0 1 1 1 0 GrpE MADF_DNA_bdg PF10545.4 gi|518652293|ref|YP_008141813.1| - 0.84 9.8 4.4 1.3 9.2 2.4 1.7 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Activator-TraM PF11657.3 gi|518652293|ref|YP_008141813.1| - 1.2 8.6 8.5 1.5 8.3 5.9 1.1 1 0 0 1 1 1 0 Transcriptional activator TraM Jnk-SapK_ap_N PF09744.4 gi|518652293|ref|YP_008141813.1| - 1.3 8.9 15.5 1.5 8.8 8.8 1.9 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Exonuc_VII_L PF02601.10 gi|518652293|ref|YP_008141813.1| - 1.5 7.9 8.9 1.6 7.8 6.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3373 PF11853.3 gi|518652293|ref|YP_008141813.1| - 1.5 7.2 6.2 1.7 7.0 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) DUF87 PF01935.12 gi|518652293|ref|YP_008141813.1| - 1.6 8.4 7.2 1.9 8.2 5.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF87 Nop25 PF09805.4 gi|518652293|ref|YP_008141813.1| - 1.7 8.7 10.5 2.4 8.2 7.3 1.2 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) OmpH PF03938.9 gi|518652293|ref|YP_008141813.1| - 1.8 8.4 14.2 2.8 7.8 9.8 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) tRNA-synt_1e PF01406.14 gi|518652293|ref|YP_008141813.1| - 2 7.4 7.2 3.3 6.7 4.2 1.7 1 1 1 2 2 2 0 tRNA synthetases class I (C) catalytic domain DUF883 PF05957.8 gi|518652293|ref|YP_008141813.1| - 3.7 7.9 5.3 19 5.7 3.7 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Vfa1 PF08432.5 gi|518652293|ref|YP_008141813.1| - 5.2 7.0 12.6 6.1 6.8 8.7 1.0 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4407 PF14362.1 gi|518652293|ref|YP_008141813.1| - 5.3 5.9 7.4 6 5.7 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SPOUT_MTase PF02590.12 gi|518652293|ref|YP_008141813.1| - 7.9 6.1 9.1 14 5.4 6.3 1.4 1 1 0 1 1 1 0 Predicted SPOUT methyltransferase ALMT PF11744.3 gi|518652293|ref|YP_008141813.1| - 8.4 4.9 8.1 9.7 4.7 5.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF677 PF05055.7 gi|518652294|ref|YP_008141814.1| - 0.11 11.0 2.9 0.12 11.0 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) UPF0093 PF03653.8 gi|518652294|ref|YP_008141814.1| - 0.47 10.3 3.5 0.49 10.3 2.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF1510 PF07423.6 gi|518652294|ref|YP_008141814.1| - 1.6 8.0 6.2 1.9 7.8 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1510) DUF2116 PF09889.4 gi|518652294|ref|YP_008141814.1| - 3.1 7.6 5.3 3.5 7.4 3.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) ATP-synt_D PF01813.12 gi|518652295|ref|YP_008141815.1| - 6.6e-49 166.1 4.8 7.4e-49 165.9 3.4 1.0 1 0 0 1 1 1 1 ATP synthase subunit D GAS PF13851.1 gi|518652295|ref|YP_008141815.1| - 0.027 13.6 4.6 0.68 9.0 0.2 2.2 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding ATP-synt_ab PF00006.20 gi|518652296|ref|YP_008141816.1| - 6.1e-60 202.3 0.0 8.3e-60 201.9 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|518652296|ref|YP_008141816.1| - 7e-13 49.0 0.0 1.7e-12 47.7 0.0 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|518652296|ref|YP_008141816.1| - 4e-11 42.9 0.3 8.1e-11 41.9 0.2 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|518652296|ref|YP_008141816.1| - 1e-05 25.3 0.3 2.9e-05 23.8 0.2 1.8 1 0 0 1 1 1 1 HAS barrel domain ATP-synt_ab PF00006.20 gi|518652297|ref|YP_008141817.1| - 1.3e-95 318.9 0.0 1.9e-95 318.4 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|518652297|ref|YP_008141817.1| - 1.9e-19 70.1 1.3 4e-19 69.1 0.9 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|518652297|ref|YP_008141817.1| - 4.4e-11 42.8 1.6 9.3e-11 41.7 0.5 2.1 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain ATP-synt_F PF01990.12 gi|518652298|ref|YP_008141818.1| - 6.8e-12 45.6 0.0 8e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.11 gi|518652299|ref|YP_008141819.1| - 1.4e-19 70.3 8.1 2.3e-19 69.7 5.6 1.3 1 1 0 1 1 1 1 ATP synthase (C/AC39) subunit MRP-L27 PF09809.4 gi|518652299|ref|YP_008141819.1| - 0.079 12.5 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L27 vATP-synt_E PF01991.13 gi|518652300|ref|YP_008141820.1| - 0.00043 19.6 11.7 0.0049 16.1 8.1 2.2 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Exonuc_VII_L PF02601.10 gi|518652300|ref|YP_008141820.1| - 0.011 14.9 2.4 0.012 14.8 1.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit RNase_E_G PF10150.4 gi|518652300|ref|YP_008141820.1| - 0.023 13.9 2.5 0.037 13.2 1.7 1.3 1 0 0 1 1 1 0 Ribonuclease E/G family DUF2600 PF10776.4 gi|518652300|ref|YP_008141820.1| - 0.032 13.0 1.9 0.044 12.6 1.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2600) GIIM PF08388.6 gi|518652300|ref|YP_008141820.1| - 0.06 13.1 0.5 0.19 11.5 0.3 2.0 1 1 1 2 2 2 0 Group II intron, maturase-specific domain ALMT PF11744.3 gi|518652300|ref|YP_008141820.1| - 0.078 11.6 2.0 0.081 11.5 1.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Mst1_SARAH PF11629.3 gi|518652300|ref|YP_008141820.1| - 0.1 12.4 1.8 0.3 10.9 0.1 2.6 3 0 0 3 3 3 0 C terminal SARAH domain of Mst1 DUF4326 PF14216.1 gi|518652300|ref|YP_008141820.1| - 0.11 13.1 0.4 0.41 11.2 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4326) hDGE_amylase PF14701.1 gi|518652300|ref|YP_008141820.1| - 0.11 11.3 4.0 0.11 11.3 2.8 1.1 1 0 0 1 1 1 0 glucanotransferase domain of human glycogen debranching enzyme Prok_Ub PF14454.1 gi|518652300|ref|YP_008141820.1| - 0.12 12.0 0.0 1.7 8.3 0.0 2.3 2 0 0 2 2 2 0 Prokaryotic Ubiquitin PKK PF12474.3 gi|518652300|ref|YP_008141820.1| - 0.27 10.9 2.7 2.4 7.9 0.3 2.5 1 1 1 2 2 2 0 Polo kinase kinase Phage_Mu_Gam PF07352.7 gi|518652300|ref|YP_008141820.1| - 0.36 10.3 9.2 1.4 8.4 6.4 1.9 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein Cortex-I_coil PF09304.5 gi|518652300|ref|YP_008141820.1| - 0.48 10.4 6.4 17 5.4 3.1 2.3 2 0 0 2 2 2 0 Cortexillin I, coiled coil UBN_AB PF14075.1 gi|518652300|ref|YP_008141820.1| - 0.61 9.7 8.5 0.38 10.3 0.9 2.0 1 1 1 2 2 2 0 Ubinuclein conserved middle domain ATP-synt_B PF00430.13 gi|518652300|ref|YP_008141820.1| - 0.71 9.6 5.8 2.1 8.1 4.0 1.9 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Baculo_PEP_C PF04513.7 gi|518652300|ref|YP_008141820.1| - 0.74 9.6 4.2 1.9 8.2 2.9 1.8 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Fib_alpha PF08702.5 gi|518652300|ref|YP_008141820.1| - 2.1 8.4 11.4 2.4 8.2 7.3 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ATP-synt_C PF00137.16 gi|518652301|ref|YP_008141821.1| - 9.6e-15 54.2 13.1 1.1e-14 54.0 9.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit C Yip1 PF04893.12 gi|518652301|ref|YP_008141821.1| - 0.62 9.5 6.9 0.7 9.3 4.8 1.0 1 0 0 1 1 1 0 Yip1 domain PHO4 PF01384.15 gi|518652301|ref|YP_008141821.1| - 0.93 8.0 6.1 1 7.9 4.3 1.0 1 0 0 1 1 1 0 Phosphate transporter family FtsX PF02687.16 gi|518652301|ref|YP_008141821.1| - 3.3 7.4 8.4 4.1 7.2 5.8 1.1 1 0 0 1 1 1 0 FtsX-like permease family ABC2_membrane_2 PF12679.2 gi|518652302|ref|YP_008141822.1| - 1.2e-15 57.1 10.6 4e-15 55.4 7.3 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|518652302|ref|YP_008141822.1| - 2.3e-08 33.4 42.1 1.2e-07 31.1 29.2 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|518652302|ref|YP_008141822.1| - 0.35 9.9 52.6 5.1 6.1 36.4 2.4 1 1 0 1 1 1 0 ABC-2 family transporter protein SH3_8 PF13457.1 gi|518652302|ref|YP_008141822.1| - 0.54 10.4 10.3 0.077 13.1 1.1 2.8 2 1 1 3 3 3 0 SH3-like domain DUF441 PF04284.8 gi|518652302|ref|YP_008141822.1| - 1.6 8.6 11.9 0.18 11.6 4.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF441) ABC2_membrane_5 PF13346.1 gi|518652302|ref|YP_008141822.1| - 2.2 7.5 30.5 1.4 8.2 18.2 2.7 2 1 0 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.22 gi|518652303|ref|YP_008141823.1| - 5.9e-23 81.6 0.0 2.5e-22 79.6 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|518652303|ref|YP_008141823.1| - 2.6e-10 40.7 3.0 8.1e-09 35.8 0.3 2.7 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|518652303|ref|YP_008141823.1| - 8.4e-06 26.2 3.3 1.4e-05 25.4 2.2 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|518652303|ref|YP_008141823.1| - 0.0047 16.1 0.7 1.8 7.7 0.1 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|518652303|ref|YP_008141823.1| - 0.0064 15.9 0.2 0.014 14.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Phage_prot_Gp6 PF05133.9 gi|518652303|ref|YP_008141823.1| - 0.014 13.9 0.1 0.025 13.1 0.1 1.4 1 0 0 1 1 1 0 Phage portal protein, SPP1 Gp6-like UPF0079 PF02367.12 gi|518652303|ref|YP_008141823.1| - 0.11 12.1 0.1 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 zf-ZPR1 PF03367.8 gi|518652304|ref|YP_008141824.1| - 1.7e-29 102.0 0.7 3.1e-29 101.2 0.5 1.4 1 1 0 1 1 1 1 ZPR1 zinc-finger domain TF_Zn_Ribbon PF08271.7 gi|518652304|ref|YP_008141824.1| - 0.0096 15.2 3.2 1.4 8.3 0.3 2.6 2 0 0 2 2 2 2 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|518652304|ref|YP_008141824.1| - 0.071 12.3 0.9 2.6 7.3 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.1 gi|518652304|ref|YP_008141824.1| - 0.13 12.5 2.0 0.2 11.9 1.4 1.4 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain RNA_POL_M_15KD PF02150.11 gi|518652304|ref|YP_008141824.1| - 0.13 11.9 3.6 1.1 9.0 2.5 2.1 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|518652304|ref|YP_008141824.1| - 0.21 11.4 2.1 0.64 9.8 1.5 1.7 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|518652304|ref|YP_008141824.1| - 0.25 11.2 1.4 11 6.0 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF2296 PF10058.4 gi|518652304|ref|YP_008141824.1| - 0.62 9.8 4.7 8.4 6.2 0.3 2.9 3 1 1 4 4 4 0 Predicted integral membrane metal-binding protein (DUF2296) HNH_5 PF14279.1 gi|518652304|ref|YP_008141824.1| - 2.9 7.9 6.2 1.7 8.6 1.0 2.3 1 1 1 2 2 2 0 HNH endonuclease PhnA_Zn_Ribbon PF08274.7 gi|518652304|ref|YP_008141824.1| - 4.1 7.2 6.5 29 4.5 4.5 2.0 1 1 0 1 1 1 0 PhnA Zinc-Ribbon FMN_dh PF01070.13 gi|518652305|ref|YP_008141825.1| - 4.4e-26 91.5 0.0 1.1e-12 47.5 0.0 2.2 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|518652305|ref|YP_008141825.1| - 9.8e-05 21.3 5.1 0.0024 16.8 0.6 3.4 3 1 1 4 4 4 1 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.16 gi|518652305|ref|YP_008141825.1| - 0.00015 20.7 0.8 0.0014 17.6 0.1 2.3 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Glu_synthase PF01645.12 gi|518652305|ref|YP_008141825.1| - 0.023 13.6 2.7 0.028 13.3 0.1 2.2 3 0 0 3 3 3 0 Conserved region in glutamate synthase AA_kinase PF00696.23 gi|518652306|ref|YP_008141826.1| - 4.4e-33 114.8 0.1 5.2e-33 114.5 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family Staygreen PF12638.2 gi|518652306|ref|YP_008141826.1| - 0.085 12.3 0.0 1.3 8.5 0.0 2.5 2 1 1 3 3 3 0 Staygreen protein GCV_T PF01571.16 gi|518652307|ref|YP_008141827.1| - 2.4e-58 196.9 0.0 3.1e-58 196.6 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.6 gi|518652307|ref|YP_008141827.1| - 5.6e-20 71.1 0.0 8.9e-20 70.5 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain TrmE_N PF10396.4 gi|518652307|ref|YP_008141827.1| - 0.034 14.0 0.0 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 GTP-binding protein TrmE N-terminus Lipocalin_3 PF12702.2 gi|518652308|ref|YP_008141828.1| - 0.062 13.3 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Lipocalin-like EamA PF00892.15 gi|518652309|ref|YP_008141829.1| - 0.0035 17.3 2.3 0.0046 17.0 1.6 1.2 1 0 0 1 1 1 1 EamA-like transporter family NfeD PF01957.13 gi|518652309|ref|YP_008141829.1| - 0.063 13.4 0.3 0.072 13.2 0.2 1.0 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding ATP_synt_H PF05493.8 gi|518652309|ref|YP_008141829.1| - 0.12 12.4 0.4 2.4 8.2 0.3 2.1 2 0 0 2 2 2 0 ATP synthase subunit H Sdh_cyt PF01127.17 gi|518652309|ref|YP_008141829.1| - 0.23 11.2 8.0 0.53 10.1 5.7 1.5 1 1 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF2754 PF10953.3 gi|518652309|ref|YP_008141829.1| - 0.35 10.9 2.8 0.41 10.7 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) DUF4405 PF14358.1 gi|518652309|ref|YP_008141829.1| - 0.74 9.9 4.8 0.9 9.7 2.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4405) HMGL-like PF00682.14 gi|518652310|ref|YP_008141830.1| - 1.7e-70 237.4 0.1 2.4e-70 236.8 0.1 1.2 1 0 0 1 1 1 1 HMGL-like Sigma70_r1_1 PF03979.9 gi|518652310|ref|YP_008141830.1| - 0.044 13.7 1.0 0.19 11.7 0.0 2.4 2 0 0 2 2 2 0 Sigma-70 factor, region 1.1 Aconitase PF00330.15 gi|518652311|ref|YP_008141831.1| - 6.7e-86 288.6 3.9 1.3e-55 188.7 0.3 2.2 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|518652311|ref|YP_008141831.1| - 0.00031 19.4 0.0 0.00046 18.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Aconitase_C PF00694.14 gi|518652312|ref|YP_008141832.1| - 5.8e-21 74.9 0.8 9.3e-20 71.0 0.6 2.3 1 1 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|518652312|ref|YP_008141832.1| - 0.0091 15.4 0.6 0.32 10.3 0.4 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.15 gi|518652313|ref|YP_008141833.1| - 5.5e-71 239.3 0.0 6.4e-71 239.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Peptidase_C71 PF12386.3 gi|518652314|ref|YP_008141834.1| - 5.2 6.5 7.7 5.5 6.4 5.3 1.0 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Pyr_redox_2 PF07992.9 gi|518652315|ref|YP_008141835.1| - 4.9e-14 52.6 0.1 8e-14 51.9 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518652315|ref|YP_008141835.1| - 0.0036 17.6 0.2 3.3 8.1 0.0 3.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DUF3221 PF11518.3 gi|518652315|ref|YP_008141835.1| - 0.039 13.6 0.0 0.078 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3221) NAD_binding_8 PF13450.1 gi|518652315|ref|YP_008141835.1| - 0.099 12.6 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF1641 PF07849.6 gi|518652316|ref|YP_008141836.1| - 3.3e-12 45.7 1.6 5.7e-12 45.0 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) DUF3753 PF12575.3 gi|518652316|ref|YP_008141836.1| - 0.033 14.0 1.1 7.8 6.3 0.0 3.8 3 2 0 4 4 4 0 Protein of unknown function (DUF3753) ThiS-like PF14453.1 gi|518652317|ref|YP_008141837.1| - 0.00012 21.8 0.5 0.00015 21.5 0.4 1.1 1 0 0 1 1 1 1 ThiS-like ubiquitin ThiS PF02597.15 gi|518652317|ref|YP_008141837.1| - 0.00014 22.2 0.0 0.00015 22.1 0.0 1.0 1 0 0 1 1 1 1 ThiS family tRNA_NucTransf2 PF09249.6 gi|518652318|ref|YP_008141838.1| - 4.6e-35 119.9 0.0 1e-34 118.8 0.0 1.6 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|518652318|ref|YP_008141838.1| - 2e-11 44.0 0.9 5.4e-11 42.6 0.1 2.2 2 0 0 2 2 2 1 Nucleotidyltransferase domain DUF4077 PF13295.1 gi|518652318|ref|YP_008141838.1| - 0.094 12.4 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) NAC PF01849.13 gi|518652319|ref|YP_008141839.1| - 1.2e-15 56.7 1.7 1.2e-15 56.7 1.2 1.5 2 0 0 2 2 2 1 NAC domain UBA PF00627.26 gi|518652319|ref|YP_008141839.1| - 8.9e-06 25.3 0.5 1.9e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 UBA/TS-N domain Gln-synt_C PF00120.19 gi|518652321|ref|YP_008141841.1| - 6.2e-88 294.2 0.0 7.9e-88 293.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|518652321|ref|YP_008141841.1| - 6.2e-22 76.9 0.1 1.6e-21 75.6 0.0 1.8 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain tRNA-synt_1 PF00133.17 gi|518652322|ref|YP_008141842.1| - 1.9e-104 349.8 3.5 1.2e-103 347.1 2.4 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|518652322|ref|YP_008141842.1| - 9e-34 116.4 0.6 1.9e-33 115.4 0.4 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|518652322|ref|YP_008141842.1| - 1.7e-26 92.8 1.4 1.6e-13 50.1 0.0 3.5 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|518652322|ref|YP_008141842.1| - 3.2e-07 29.7 0.0 0.0094 15.1 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|518652322|ref|YP_008141842.1| - 1.3e-05 24.6 0.0 3.1e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 DZR PF12773.2 gi|518652322|ref|YP_008141842.1| - 0.044 13.5 0.8 1.4 8.8 0.1 2.6 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|518652322|ref|YP_008141842.1| - 0.26 10.8 3.5 7.9 6.1 0.4 3.6 3 1 0 3 3 3 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.7 gi|518652322|ref|YP_008141842.1| - 1 9.2 3.8 5.9 6.7 0.0 3.0 3 0 0 3 3 3 0 PhnA Zinc-Ribbon DUF4041 PF13250.1 gi|518652322|ref|YP_008141842.1| - 3.3 7.3 8.7 0.12 11.8 0.3 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4041) DUF2975 PF11188.3 gi|518652323|ref|YP_008141843.1| - 0.074 12.7 2.0 0.079 12.6 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) zf-DHHC PF01529.15 gi|518652323|ref|YP_008141843.1| - 1.3 8.3 6.3 1.4 8.2 4.4 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3792 PF12670.2 gi|518652324|ref|YP_008141844.1| - 0.02 14.7 1.4 0.026 14.3 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) Polysacc_synt_C PF14667.1 gi|518652324|ref|YP_008141844.1| - 0.032 14.0 4.9 0.047 13.4 3.4 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain AgrB PF04647.10 gi|518652324|ref|YP_008141844.1| - 0.077 12.0 4.4 0.087 11.8 3.1 1.1 1 0 0 1 1 1 0 Accessory gene regulator B Abhydrolase_9_N PF15420.1 gi|518652324|ref|YP_008141844.1| - 0.13 12.0 3.2 0.17 11.6 2.2 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus AA_permease_2 PF13520.1 gi|518652324|ref|YP_008141844.1| - 0.13 10.7 6.4 0.16 10.4 4.5 1.1 1 0 0 1 1 1 0 Amino acid permease DUF4239 PF14023.1 gi|518652324|ref|YP_008141844.1| - 0.17 11.2 3.0 0.18 11.1 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) YqhR PF11085.3 gi|518652324|ref|YP_008141844.1| - 0.17 11.3 2.5 0.21 11.1 1.7 1.1 1 0 0 1 1 1 0 Conserved membrane protein YqhR DUF1385 PF07136.6 gi|518652324|ref|YP_008141844.1| - 0.18 10.8 4.3 0.26 10.3 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) Voltage_CLC PF00654.15 gi|518652324|ref|YP_008141844.1| - 0.19 10.6 2.6 0.2 10.6 1.8 1.0 1 0 0 1 1 1 0 Voltage gated chloride channel O-antigen_lig PF13425.1 gi|518652324|ref|YP_008141844.1| - 0.24 11.3 3.2 0.28 11.1 2.2 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF202 PF02656.10 gi|518652324|ref|YP_008141844.1| - 1.4 9.1 3.6 0.74 10.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Lyase_1 PF00206.15 gi|518652325|ref|YP_008141845.1| - 2.4e-25 89.4 0.0 3.4e-25 88.8 0.0 1.2 1 0 0 1 1 1 1 Lyase Arginosuc_synth PF00764.14 gi|518652326|ref|YP_008141846.1| - 3.5e-132 441.1 2.6 4.4e-132 440.7 1.8 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.8 gi|518652326|ref|YP_008141846.1| - 7.3e-05 22.1 0.1 0.00016 21.0 0.1 1.7 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|518652326|ref|YP_008141846.1| - 0.0014 18.1 0.0 0.0023 17.4 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase Curto_V2 PF07325.6 gi|518652326|ref|YP_008141846.1| - 0.058 13.0 1.7 4.3 7.0 0.0 3.0 2 1 0 2 2 2 0 Curtovirus V2 protein ACT_7 PF13840.1 gi|518652327|ref|YP_008141847.1| - 0.00022 20.6 1.9 0.001 18.5 0.1 2.5 2 0 0 2 2 2 1 ACT domain Fer4 PF00037.22 gi|518652328|ref|YP_008141848.1| - 4.6e-12 44.9 11.1 5.1e-06 25.8 1.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|518652328|ref|YP_008141848.1| - 4.5e-11 42.9 26.0 9.9e-07 29.0 6.8 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518652328|ref|YP_008141848.1| - 7.3e-09 35.7 3.3 7.3e-09 35.7 2.3 1.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|518652328|ref|YP_008141848.1| - 3.4e-08 33.4 9.1 1.2e-05 25.1 4.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518652328|ref|YP_008141848.1| - 1e-07 31.5 18.8 2e-06 27.5 5.6 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|518652328|ref|YP_008141848.1| - 6.2e-07 29.8 4.5 0.0043 17.5 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_2 PF12797.2 gi|518652328|ref|YP_008141848.1| - 9.4e-07 28.4 9.5 0.002 17.9 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|518652328|ref|YP_008141848.1| - 6.2e-06 26.4 13.1 0.0072 16.8 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518652328|ref|YP_008141848.1| - 7.1e-06 25.7 3.7 0.0045 16.8 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|518652328|ref|YP_008141848.1| - 8e-06 26.1 5.1 0.015 15.7 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_6 PF12837.2 gi|518652328|ref|YP_008141848.1| - 1.3e-05 24.8 9.7 0.0021 17.8 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|518652328|ref|YP_008141848.1| - 1.8e-05 25.4 6.4 3.5e-05 24.4 4.4 1.5 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|518652328|ref|YP_008141848.1| - 2.7e-05 24.1 7.6 0.041 14.2 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|518652328|ref|YP_008141848.1| - 6.4e-05 23.2 4.1 0.00061 20.0 3.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|518652328|ref|YP_008141848.1| - 0.00084 19.7 8.3 0.0066 16.8 0.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|518652328|ref|YP_008141848.1| - 0.05 13.4 2.6 0.7 9.8 1.9 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain AIRS_C PF02769.17 gi|518652329|ref|YP_008141849.1| - 6.6e-20 71.6 0.0 1e-19 71.0 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|518652329|ref|YP_008141849.1| - 4.2e-10 39.7 0.9 7.6e-10 38.9 0.6 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain CMD PF02627.15 gi|518652331|ref|YP_008141851.1| - 5.7e-19 67.7 0.2 7.1e-19 67.4 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Carmo_coat_C PF08462.5 gi|518652331|ref|YP_008141851.1| - 0.034 14.0 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Carmovirus coat protein AhpC-TSA PF00578.16 gi|518652332|ref|YP_008141852.1| - 2.4e-39 133.8 0.0 3.1e-39 133.4 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|518652332|ref|YP_008141852.1| - 1.7e-13 50.3 0.0 2.4e-13 49.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.4 gi|518652332|ref|YP_008141852.1| - 9.5e-10 37.9 0.1 1.6e-09 37.2 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin DUF4368 PF14287.1 gi|518652332|ref|YP_008141852.1| - 0.046 13.5 0.1 0.077 12.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) GcpE PF04551.9 gi|518652332|ref|YP_008141852.1| - 0.15 10.8 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 GcpE protein DUF3342 PF11822.3 gi|518652333|ref|YP_008141853.1| - 0.062 12.4 0.2 0.069 12.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) ParA PF10609.4 gi|518652334|ref|YP_008141854.1| - 3.7e-35 119.6 0.3 8.3e-35 118.5 0.1 1.7 2 0 0 2 2 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|518652334|ref|YP_008141854.1| - 6.3e-25 87.7 0.1 9e-25 87.2 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|518652334|ref|YP_008141854.1| - 4.4e-11 42.9 0.0 3.3e-10 40.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|518652334|ref|YP_008141854.1| - 3.1e-07 29.7 0.2 6.7e-07 28.6 0.1 1.5 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|518652334|ref|YP_008141854.1| - 7.2e-07 28.5 2.6 3.4e-06 26.3 0.4 2.4 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_26 PF13500.1 gi|518652334|ref|YP_008141854.1| - 2.6e-05 23.9 1.9 0.00023 20.8 1.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|518652334|ref|YP_008141854.1| - 0.00012 21.5 0.0 0.00023 20.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|518652334|ref|YP_008141854.1| - 0.00039 19.6 0.1 0.0027 16.9 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.17 gi|518652334|ref|YP_008141854.1| - 0.0023 17.3 0.1 0.0068 15.8 0.2 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain VirC1 PF07015.6 gi|518652334|ref|YP_008141854.1| - 0.0027 16.8 0.1 0.0051 15.9 0.0 1.4 1 0 0 1 1 1 1 VirC1 protein AAA_17 PF13207.1 gi|518652334|ref|YP_008141854.1| - 0.0034 18.1 0.0 0.019 15.8 0.0 2.2 2 1 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|518652334|ref|YP_008141854.1| - 0.0038 16.4 0.1 0.0063 15.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 APS_kinase PF01583.15 gi|518652334|ref|YP_008141854.1| - 0.0038 16.8 0.0 0.006 16.2 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase ArgK PF03308.11 gi|518652334|ref|YP_008141854.1| - 0.041 12.6 0.1 0.07 11.8 0.1 1.3 1 0 0 1 1 1 0 ArgK protein AAA_22 PF13401.1 gi|518652334|ref|YP_008141854.1| - 0.041 14.0 0.1 0.076 13.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain Zn_Tnp_IS1595 PF12760.2 gi|518652334|ref|YP_008141854.1| - 0.046 13.5 0.1 0.1 12.4 0.1 1.5 2 0 0 2 2 1 0 Transposase zinc-ribbon domain IstB_IS21 PF01695.12 gi|518652334|ref|YP_008141854.1| - 0.056 12.8 0.1 0.25 10.7 0.1 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|518652334|ref|YP_008141854.1| - 0.057 13.1 1.4 0.52 10.1 0.1 2.4 2 1 0 2 2 2 0 Part of AAA domain NB-ARC PF00931.17 gi|518652334|ref|YP_008141854.1| - 0.072 11.9 0.6 0.12 11.2 0.4 1.3 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.17 gi|518652334|ref|YP_008141854.1| - 0.076 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 RNA helicase KTI12 PF08433.5 gi|518652334|ref|YP_008141854.1| - 0.093 11.9 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 zf-ISL3 PF14690.1 gi|518652334|ref|YP_008141854.1| - 0.096 12.7 0.2 0.25 11.4 0.1 1.7 2 0 0 2 2 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AAA_29 PF13555.1 gi|518652334|ref|YP_008141854.1| - 0.11 12.0 0.5 0.24 10.9 0.1 1.7 2 0 0 2 2 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.10 gi|518652334|ref|YP_008141854.1| - 0.11 12.1 0.2 0.34 10.6 0.1 1.8 2 0 0 2 2 2 0 NTPase NACHT PF05729.7 gi|518652334|ref|YP_008141854.1| - 0.22 11.1 0.6 0.34 10.5 0.4 1.2 1 0 0 1 1 1 0 NACHT domain PhoH PF02562.11 gi|518652334|ref|YP_008141854.1| - 0.22 10.7 0.9 0.47 9.6 0.6 1.5 1 0 0 1 1 1 0 PhoH-like protein PfkB PF00294.19 gi|518652335|ref|YP_008141855.1| - 5.8e-53 179.9 0.0 6.5e-53 179.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|518652335|ref|YP_008141855.1| - 7.4e-08 31.8 0.0 1.3e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.12 gi|518652335|ref|YP_008141855.1| - 0.0017 17.6 0.0 0.0024 17.1 0.0 1.2 1 0 0 1 1 1 1 Carbohydrate kinase HIT PF01230.18 gi|518652336|ref|YP_008141856.1| - 9.9e-22 77.3 0.1 1.3e-21 76.8 0.1 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|518652336|ref|YP_008141856.1| - 2.6e-09 37.3 0.2 3.1e-09 37.0 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|518652336|ref|YP_008141856.1| - 2.9e-06 26.9 0.3 6.5e-06 25.8 0.2 1.6 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Pribosyltran PF00156.22 gi|518652337|ref|YP_008141857.1| - 5.9e-22 77.7 0.4 9.5e-22 77.0 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|518652337|ref|YP_008141857.1| - 0.0001 21.6 0.0 0.00017 20.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase Sigma70_r4_2 PF08281.7 gi|518652337|ref|YP_008141857.1| - 0.00085 18.7 0.0 0.0018 17.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|518652337|ref|YP_008141857.1| - 0.0012 18.4 0.0 0.0028 17.2 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain UPRTase PF14681.1 gi|518652337|ref|YP_008141857.1| - 0.0095 15.1 0.1 0.012 14.8 0.1 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase GerE PF00196.14 gi|518652337|ref|YP_008141857.1| - 0.015 14.6 0.0 0.036 13.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_24 PF13412.1 gi|518652337|ref|YP_008141857.1| - 0.022 14.1 0.0 0.043 13.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_40 PF14493.1 gi|518652337|ref|YP_008141857.1| - 0.086 13.0 0.1 0.17 12.0 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain Zeta_toxin PF06414.7 gi|518652337|ref|YP_008141857.1| - 0.11 11.6 0.1 0.17 10.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin tRNA-synt_1f PF01921.13 gi|518652338|ref|YP_008141858.1| - 9.3e-121 402.8 0.0 1.2e-120 402.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) OrfB_Zn_ribbon PF07282.6 gi|518652338|ref|YP_008141858.1| - 0.0058 16.2 1.0 0.012 15.2 0.7 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain tRNA-synt_1g PF09334.6 gi|518652338|ref|YP_008141858.1| - 0.048 12.3 0.0 5.4 5.5 0.0 2.7 3 0 0 3 3 3 0 tRNA synthetases class I (M) zf-ribbon_3 PF13248.1 gi|518652338|ref|YP_008141858.1| - 0.15 11.3 1.4 7.1 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|518652338|ref|YP_008141858.1| - 0.15 11.8 4.3 0.29 10.9 3.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-RanBP PF00641.13 gi|518652338|ref|YP_008141858.1| - 0.98 8.5 4.0 1.2 8.3 0.5 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Desulfoferrod_N PF06397.7 gi|518652338|ref|YP_008141858.1| - 3.8 6.9 5.2 1.5 8.2 0.5 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain AAA_22 PF13401.1 gi|518652339|ref|YP_008141859.1| - 3.4e-10 40.1 0.0 7.4e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|518652339|ref|YP_008141859.1| - 1.9e-07 31.2 0.0 1.8e-06 28.0 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|518652339|ref|YP_008141859.1| - 0.00043 20.4 0.0 0.00092 19.4 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.8 gi|518652339|ref|YP_008141859.1| - 0.0033 16.3 0.0 0.0065 15.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Miro PF08477.8 gi|518652339|ref|YP_008141859.1| - 0.004 17.6 0.1 0.012 16.1 0.0 1.9 2 0 0 2 2 2 1 Miro-like protein AAA_18 PF13238.1 gi|518652339|ref|YP_008141859.1| - 0.0044 17.3 0.0 0.0093 16.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain Cdc6_C PF09079.6 gi|518652339|ref|YP_008141859.1| - 0.0081 15.8 0.0 0.018 14.7 0.0 1.6 1 0 0 1 1 1 1 CDC6, C terminal AAA_17 PF13207.1 gi|518652339|ref|YP_008141859.1| - 0.029 15.2 0.1 0.051 14.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|518652339|ref|YP_008141859.1| - 0.041 14.1 0.1 0.26 11.5 0.0 2.3 2 0 0 2 2 2 0 ABC transporter AAA_24 PF13479.1 gi|518652339|ref|YP_008141859.1| - 0.093 12.3 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.1 gi|518652339|ref|YP_008141859.1| - 0.14 10.7 0.1 6.3 5.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.4 gi|518652339|ref|YP_008141859.1| - 0.15 10.9 0.0 0.23 10.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_23 PF13476.1 gi|518652339|ref|YP_008141859.1| - 3.5 7.9 5.9 21 5.3 4.1 2.3 1 1 0 1 1 1 0 AAA domain DNA_pol_B PF00136.16 gi|518652340|ref|YP_008141860.1| - 1.6e-22 79.9 6.8 1.5e-14 53.6 0.1 2.9 2 1 1 3 3 3 2 DNA polymerase family B Peptidase_M57 PF12388.3 gi|518652340|ref|YP_008141860.1| - 0.051 12.9 0.1 0.41 9.9 0.0 2.1 2 0 0 2 2 2 0 Dual-action HEIGH metallo-peptidase Plasmid_RAQPRD PF09686.5 gi|518652340|ref|YP_008141860.1| - 0.13 12.3 0.1 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Plasmid protein of unknown function (Plasmid_RAQPRD) DUF310 PF03750.8 gi|518652341|ref|YP_008141861.1| - 0.082 13.0 1.3 0.2 11.8 0.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF310) Pro_isomerase PF00160.16 gi|518652343|ref|YP_008141863.1| - 8.7e-52 175.4 1.2 9.7e-52 175.2 0.9 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sugar_tr PF00083.19 gi|518652344|ref|YP_008141864.1| - 1.1e-45 156.1 23.7 1.3e-45 155.8 16.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652344|ref|YP_008141864.1| - 1.9e-25 89.3 34.4 5.2e-25 87.9 20.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily ADH_N PF08240.7 gi|518652345|ref|YP_008141865.1| - 7.4e-30 102.9 0.8 1.4e-29 101.9 0.1 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|518652345|ref|YP_008141865.1| - 6.4e-28 96.8 0.0 9.2e-28 96.3 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|518652345|ref|YP_008141865.1| - 1.2e-05 26.1 0.0 2.4e-05 25.1 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.5 gi|518652345|ref|YP_008141865.1| - 0.0014 18.6 0.0 0.0027 17.6 0.0 1.4 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Pribosyltran_N PF13793.1 gi|518652346|ref|YP_008141866.1| - 5e-21 74.6 0.5 7.7e-20 70.7 0.0 2.6 3 0 0 3 3 3 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|518652346|ref|YP_008141866.1| - 6.7e-11 42.0 1.6 2.9e-10 39.9 0.1 2.7 3 1 0 3 3 3 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|518652346|ref|YP_008141866.1| - 4.5e-10 39.5 0.7 8.5e-10 38.6 0.1 1.7 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|518652346|ref|YP_008141866.1| - 2.5e-05 23.5 0.0 4.7e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase DUF2097 PF09870.4 gi|518652346|ref|YP_008141866.1| - 0.016 15.3 0.1 0.05 13.6 0.1 1.9 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2097) PRTase_2 PF15609.1 gi|518652346|ref|YP_008141866.1| - 0.016 14.4 0.1 0.026 13.8 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase PRTase_3 PF15610.1 gi|518652346|ref|YP_008141866.1| - 0.017 14.0 0.3 0.036 12.9 0.2 1.5 1 0 0 1 1 1 0 PRTase ComF-like DUF3713 PF12506.3 gi|518652346|ref|YP_008141866.1| - 0.056 13.5 0.6 0.23 11.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3713) DUF99 PF01949.11 gi|518652347|ref|YP_008141867.1| - 3.2e-60 202.4 0.1 3.6e-60 202.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 DDE_Tnp_1 PF01609.16 gi|518652348|ref|YP_008141868.1| - 3e-15 56.3 0.0 8e-15 54.9 0.0 1.7 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652348|ref|YP_008141868.1| - 0.00011 21.9 0.0 0.0016 18.1 0.0 2.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.1 gi|518652348|ref|YP_008141868.1| - 0.003 17.7 0.0 0.0068 16.5 0.0 1.6 1 0 0 1 1 1 1 Transposase DDE domain FancD2 PF14631.1 gi|518652348|ref|YP_008141868.1| - 0.044 10.8 0.0 0.067 10.2 0.0 1.2 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease SGL PF08450.7 gi|518652349|ref|YP_008141869.1| - 4.3e-62 209.6 0.2 5.2e-62 209.4 0.1 1.1 1 0 0 1 1 1 1 SMP-30/Gluconolaconase/LRE-like region PQQ_3 PF13570.1 gi|518652349|ref|YP_008141869.1| - 0.025 14.8 3.0 8.4 6.8 0.0 4.4 4 1 0 4 4 4 0 PQQ-like domain Str_synth PF03088.11 gi|518652349|ref|YP_008141869.1| - 0.043 13.8 0.0 0.18 11.8 0.0 2.2 2 0 0 2 2 2 0 Strictosidine synthase GATase_6 PF13522.1 gi|518652349|ref|YP_008141869.1| - 0.16 11.8 0.0 1 9.2 0.0 2.1 2 0 0 2 2 2 0 Glutamine amidotransferase domain WG_beta_rep PF14903.1 gi|518652349|ref|YP_008141869.1| - 0.19 12.0 1.5 5.7 7.3 0.0 3.2 3 0 0 3 3 3 0 WG containing repeat Rieske PF00355.21 gi|518652350|ref|YP_008141870.1| - 3.9e-14 51.9 0.0 4.2e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|518652350|ref|YP_008141870.1| - 1.2e-07 31.3 0.0 1.4e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain ETF PF01012.16 gi|518652351|ref|YP_008141871.1| - 2.3e-48 163.9 0.0 2.4e-30 105.4 0.0 2.2 2 0 0 2 2 2 2 Electron transfer flavoprotein domain ETF_alpha PF00766.14 gi|518652351|ref|YP_008141871.1| - 8.8e-20 70.1 0.1 2.1e-19 68.8 0.1 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain EF-hand_1 PF00036.27 gi|518652351|ref|YP_008141871.1| - 0.068 12.5 0.1 1.1 8.6 0.0 2.5 2 0 0 2 2 2 0 EF hand UPF0278 PF08745.6 gi|518652353|ref|YP_008141873.1| - 2.1e-06 27.1 0.0 3.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 UPF0278 family NOB1_Zn_bind PF08772.6 gi|518652353|ref|YP_008141873.1| - 0.029 14.2 1.3 0.052 13.3 0.9 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DUF4411 PF14367.1 gi|518652353|ref|YP_008141873.1| - 0.029 14.0 0.3 0.074 12.7 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4411) DUF1272 PF06906.6 gi|518652353|ref|YP_008141873.1| - 0.054 13.3 0.2 0.091 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) PIN_2 PF10130.4 gi|518652353|ref|YP_008141873.1| - 0.057 13.4 0.0 0.084 12.9 0.0 1.3 1 0 0 1 1 1 0 PIN domain DZR PF12773.2 gi|518652353|ref|YP_008141873.1| - 0.065 13.0 0.7 0.16 11.7 0.2 1.7 2 0 0 2 2 2 0 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|518652353|ref|YP_008141873.1| - 0.19 11.7 5.8 1.9 8.4 4.1 2.2 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|518652353|ref|YP_008141873.1| - 0.31 10.5 3.6 0.48 9.9 1.4 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|518652353|ref|YP_008141873.1| - 0.85 9.4 4.6 8.3 6.3 0.5 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain TauE PF01925.14 gi|518652354|ref|YP_008141874.1| - 1.8e-32 112.7 39.8 2.2e-32 112.4 27.6 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE ThiF PF00899.16 gi|518652355|ref|YP_008141875.1| - 1.8e-41 141.1 0.2 3.4e-41 140.2 0.0 1.5 2 0 0 2 2 2 1 ThiF family MoeZ_MoeB PF05237.8 gi|518652355|ref|YP_008141875.1| - 9.8e-17 60.3 0.1 1.9e-16 59.4 0.1 1.5 1 0 0 1 1 1 1 MoeZ/MoeB domain Shikimate_DH PF01488.15 gi|518652355|ref|YP_008141875.1| - 2.1e-07 31.1 0.1 3.9e-07 30.2 0.1 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518652355|ref|YP_008141875.1| - 3.2e-05 23.1 0.1 5.4e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|518652355|ref|YP_008141875.1| - 0.0063 16.1 0.1 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase adh_short PF00106.20 gi|518652355|ref|YP_008141875.1| - 0.013 15.3 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase 3HCDH_N PF02737.13 gi|518652355|ref|YP_008141875.1| - 0.014 15.0 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|518652355|ref|YP_008141875.1| - 0.016 14.7 0.1 0.028 13.9 0.1 1.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Saccharop_dh PF03435.13 gi|518652355|ref|YP_008141875.1| - 0.017 14.1 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Spermine_synth PF01564.12 gi|518652355|ref|YP_008141875.1| - 0.019 13.8 0.1 0.024 13.5 0.1 1.3 1 0 0 1 1 1 0 Spermine/spermidine synthase TrkA_N PF02254.13 gi|518652355|ref|YP_008141875.1| - 0.02 14.8 0.0 0.038 13.9 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain ApbA PF02558.11 gi|518652355|ref|YP_008141875.1| - 0.024 14.0 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Malic_M PF03949.10 gi|518652355|ref|YP_008141875.1| - 0.036 13.6 0.0 0.044 13.3 0.0 1.1 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|518652355|ref|YP_008141875.1| - 0.049 13.0 0.0 0.069 12.5 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_3 PF01494.14 gi|518652355|ref|YP_008141875.1| - 0.061 12.3 0.1 0.086 11.8 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain NAD_binding_7 PF13241.1 gi|518652355|ref|YP_008141875.1| - 0.069 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Methyltransf_18 PF12847.2 gi|518652355|ref|YP_008141875.1| - 0.085 13.4 0.1 0.15 12.6 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain Pyr_redox PF00070.22 gi|518652355|ref|YP_008141875.1| - 0.15 12.4 0.3 0.41 11.0 0.2 1.9 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF4199 PF13858.1 gi|518652356|ref|YP_008141876.1| - 2.4e-05 24.3 2.2 2.4e-05 24.3 1.5 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF4199) Cytochrom_C_asm PF01578.15 gi|518652356|ref|YP_008141876.1| - 0.047 13.2 4.4 0.059 12.9 3.1 1.3 1 1 0 1 1 1 0 Cytochrome C assembly protein FTR1 PF03239.9 gi|518652356|ref|YP_008141876.1| - 0.12 11.2 0.2 0.12 11.2 0.2 2.9 2 1 1 3 3 3 0 Iron permease FTR1 family Bestrophin PF01062.16 gi|518652356|ref|YP_008141876.1| - 0.12 11.2 0.2 0.19 10.6 0.1 1.2 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Chordopox_A13L PF05961.6 gi|518652356|ref|YP_008141876.1| - 0.33 10.9 0.0 0.33 10.9 0.0 2.7 4 0 0 4 4 4 0 Chordopoxvirus A13L protein Virul_fac_BrkB PF03631.10 gi|518652356|ref|YP_008141876.1| - 0.94 8.7 10.8 1.2 8.3 7.5 1.2 1 0 0 1 1 1 0 Virulence factor BrkB Peptidase_M24 PF00557.19 gi|518652357|ref|YP_008141877.1| - 9.6e-38 129.8 0.0 1.2e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Thymidylate_kin PF02223.12 gi|518652358|ref|YP_008141878.1| - 1e-21 77.1 0.2 1.8e-21 76.3 0.1 1.5 1 1 0 1 1 1 1 Thymidylate kinase dNK PF01712.14 gi|518652358|ref|YP_008141878.1| - 7.5e-06 25.9 0.9 1.1e-05 25.3 0.7 1.4 1 0 0 1 1 1 1 Deoxynucleoside kinase AAA_17 PF13207.1 gi|518652358|ref|YP_008141878.1| - 2.2e-05 25.2 0.0 4.5e-05 24.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518652358|ref|YP_008141878.1| - 2.3e-05 24.7 1.4 0.0001 22.6 0.5 2.3 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|518652358|ref|YP_008141878.1| - 0.00058 19.8 0.0 0.00078 19.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain PRK PF00485.13 gi|518652358|ref|YP_008141878.1| - 0.00084 18.9 0.0 0.7 9.4 0.0 2.2 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.1 gi|518652358|ref|YP_008141878.1| - 0.0026 17.6 0.0 0.0065 16.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain Arf PF00025.16 gi|518652358|ref|YP_008141878.1| - 0.015 14.5 0.0 0.032 13.4 0.0 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor family NACHT PF05729.7 gi|518652358|ref|YP_008141878.1| - 0.016 14.8 0.1 0.36 10.4 0.0 2.1 1 1 1 2 2 2 0 NACHT domain AAA_14 PF13173.1 gi|518652358|ref|YP_008141878.1| - 0.039 13.8 1.8 0.084 12.7 0.1 2.1 1 1 0 2 2 2 0 AAA domain AAA_16 PF13191.1 gi|518652358|ref|YP_008141878.1| - 0.095 12.6 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_21 PF13304.1 gi|518652358|ref|YP_008141878.1| - 0.3 11.0 8.0 0.49 10.3 5.5 1.3 1 1 0 1 1 1 0 AAA domain CBS PF00571.23 gi|518652359|ref|YP_008141879.1| - 1.4e-17 63.2 0.3 5.1e-11 42.1 0.1 2.7 3 0 0 3 3 3 2 CBS domain HTH_3 PF01381.17 gi|518652359|ref|YP_008141879.1| - 7.1e-16 57.7 0.3 7.1e-16 57.7 0.2 1.7 2 0 0 2 2 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|518652359|ref|YP_008141879.1| - 1.9e-12 47.0 0.8 4e-12 46.0 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|518652359|ref|YP_008141879.1| - 2.7e-11 43.4 0.0 4.9e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|518652359|ref|YP_008141879.1| - 2.1e-05 24.2 1.1 0.0002 21.0 0.1 2.7 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|518652359|ref|YP_008141879.1| - 5.4e-05 23.2 0.0 0.00015 21.8 0.0 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.1 gi|518652359|ref|YP_008141879.1| - 0.0001 21.8 0.0 0.00019 20.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652359|ref|YP_008141879.1| - 0.0032 16.8 0.5 0.12 11.8 0.1 2.9 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.1 gi|518652359|ref|YP_008141879.1| - 0.02 14.4 1.3 0.12 11.9 0.3 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain CPSase_L_D3 PF02787.14 gi|518652359|ref|YP_008141879.1| - 0.024 14.4 0.1 0.092 12.5 0.0 2.0 2 1 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pox_polyA_pol_C PF12629.2 gi|518652359|ref|YP_008141879.1| - 0.029 14.0 0.4 0.037 13.7 0.3 1.1 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase C-terminal domain DUF3502 PF12010.3 gi|518652359|ref|YP_008141879.1| - 0.059 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) MarR_2 PF12802.2 gi|518652359|ref|YP_008141879.1| - 0.064 12.9 0.1 0.31 10.7 0.0 2.0 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.1 gi|518652359|ref|YP_008141879.1| - 0.071 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_17 PF12728.2 gi|518652359|ref|YP_008141879.1| - 0.1 12.8 0.0 0.26 11.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|518652359|ref|YP_008141879.1| - 0.11 12.3 0.0 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain NETI PF14044.1 gi|518652359|ref|YP_008141879.1| - 0.11 11.9 0.0 0.23 10.9 0.0 1.5 1 0 0 1 1 1 0 NETI protein DUF4041 PF13250.1 gi|518652359|ref|YP_008141879.1| - 0.13 11.8 1.8 0.16 11.5 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) YbaB_DNA_bd PF02575.11 gi|518652359|ref|YP_008141879.1| - 0.25 11.2 1.8 1.4 8.8 0.0 2.6 3 0 0 3 3 3 0 YbaB/EbfC DNA-binding family RHH_1 PF01402.16 gi|518652359|ref|YP_008141879.1| - 0.54 10.2 2.2 1.7 8.6 0.5 2.4 2 1 1 3 3 2 0 Ribbon-helix-helix protein, copG family DUF46 PF01864.12 gi|518652360|ref|YP_008141880.1| - 5.2e-42 143.6 11.1 5.9e-42 143.5 7.7 1.0 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|518652360|ref|YP_008141880.1| - 4e-09 36.5 11.4 4e-09 36.5 7.9 1.6 1 1 0 1 1 1 1 Cytidylyltransferase family DUF3307 PF11750.3 gi|518652360|ref|YP_008141880.1| - 0.0063 16.2 0.8 0.039 13.6 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3307) PTH2 PF01981.11 gi|518652361|ref|YP_008141881.1| - 1.1e-41 141.1 0.7 1.2e-41 141.0 0.5 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DUF763 PF05559.6 gi|518652362|ref|YP_008141882.1| - 1.1e-105 353.0 0.0 1.4e-105 352.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) TPR_19 PF14559.1 gi|518652362|ref|YP_008141882.1| - 0.014 15.7 0.0 0.032 14.5 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4201 PF13870.1 gi|518652362|ref|YP_008141882.1| - 0.015 14.7 0.1 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) TPR_11 PF13414.1 gi|518652362|ref|YP_008141882.1| - 0.027 14.1 0.1 0.055 13.1 0.1 1.5 1 0 0 1 1 1 0 TPR repeat LAGLIDADG_1 PF00961.14 gi|518652362|ref|YP_008141882.1| - 0.88 10.1 5.2 3 8.4 3.6 2.0 1 1 0 1 1 1 0 LAGLIDADG endonuclease Peptidase_M48 PF01435.13 gi|518652364|ref|YP_008141884.1| - 1.1e-17 64.3 0.0 2.1e-17 63.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|518652364|ref|YP_008141884.1| - 0.0036 16.3 4.4 0.0036 16.3 3.0 1.8 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF2268 PF10026.4 gi|518652364|ref|YP_008141884.1| - 0.004 16.5 0.4 0.0097 15.2 0.4 1.5 2 0 0 2 2 2 1 Predicted Zn-dependent protease (DUF2268) DUF955 PF06114.8 gi|518652364|ref|YP_008141884.1| - 0.0088 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF955) DUF2201_N PF13203.1 gi|518652364|ref|YP_008141884.1| - 0.02 14.0 0.1 0.028 13.6 0.1 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain ABC2_membrane_2 PF12679.2 gi|518652364|ref|YP_008141884.1| - 1.3 7.8 18.3 2.1 7.1 12.6 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein RDD PF06271.7 gi|518652365|ref|YP_008141885.1| - 2e-07 30.9 14.0 2e-07 30.9 9.7 3.0 1 1 1 2 2 2 1 RDD family DUF95 PF01944.12 gi|518652365|ref|YP_008141885.1| - 1.7e-06 27.8 14.5 1.7e-06 27.8 10.0 2.5 2 2 1 3 3 3 1 Integral membrane protein DUF95 PqiA PF04403.8 gi|518652365|ref|YP_008141885.1| - 9.5 5.7 11.0 5.4 6.5 0.2 3.3 3 1 1 4 4 4 0 Paraquat-inducible protein A Hydantoinase_A PF01968.13 gi|518652366|ref|YP_008141886.1| - 5.9e-82 275.0 5.2 1.2e-80 270.7 0.2 2.1 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|518652366|ref|YP_008141886.1| - 5.4e-47 159.5 0.0 2.7e-46 157.2 0.0 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|518652366|ref|YP_008141886.1| - 0.16 10.2 1.4 2.5 6.3 0.1 2.2 2 0 0 2 2 2 0 MutL protein Hydantoinase_B PF02538.9 gi|518652367|ref|YP_008141887.1| - 1.3e-142 475.7 1.6 1.5e-142 475.4 1.1 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase SLT_L PF14718.1 gi|518652367|ref|YP_008141887.1| - 0.19 11.5 0.2 0.32 10.8 0.1 1.3 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain GMP_PDE_delta PF05351.6 gi|518652368|ref|YP_008141888.1| - 0.0032 17.2 2.3 0.0045 16.7 1.6 1.2 1 0 0 1 1 1 1 GMP-PDE, delta subunit PspB PF06667.7 gi|518652368|ref|YP_008141888.1| - 0.51 10.3 2.1 0.55 10.2 0.0 2.1 2 0 0 2 2 2 0 Phage shock protein B zf-DHHC PF01529.15 gi|518652368|ref|YP_008141888.1| - 0.8 9.0 10.8 1.3 8.4 7.5 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF4051 PF13260.1 gi|518652368|ref|YP_008141888.1| - 1.3 8.4 5.5 2.5 7.4 3.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) HTH_45 PF14947.1 gi|518652369|ref|YP_008141889.1| - 1.1e-14 54.0 8.0 1.1e-14 54.0 5.6 1.8 2 1 0 2 2 2 1 Winged helix-turn-helix HTH_24 PF13412.1 gi|518652369|ref|YP_008141889.1| - 0.013 14.8 4.1 0.031 13.6 1.8 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DDE_Tnp_1 PF01609.16 gi|518652370|ref|YP_008141890.1| - 2.3e-15 56.7 2.2 3.2e-15 56.2 1.5 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518652370|ref|YP_008141890.1| - 1.1e-11 44.8 0.0 2.1e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652370|ref|YP_008141890.1| - 1.9e-05 24.4 1.3 0.00025 20.8 0.9 2.2 1 1 0 1 1 1 1 Transposase DDE domain PhoH PF02562.11 gi|518652370|ref|YP_008141890.1| - 0.013 14.7 0.3 0.039 13.1 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein Exo_endo_phos PF03372.18 gi|518652371|ref|YP_008141891.1| - 8.2e-25 88.1 0.0 9.5e-25 87.9 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.1 gi|518652371|ref|YP_008141891.1| - 3.1e-12 46.1 0.0 4.7e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase Oxidored_molyb PF00174.14 gi|518652372|ref|YP_008141892.1| - 1.8e-41 141.3 0.0 2.3e-41 141.0 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain GET2 PF08690.5 gi|518652373|ref|YP_008141893.1| - 1.1 8.3 6.7 1.5 8.0 4.7 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Pex24p PF06398.6 gi|518652373|ref|YP_008141893.1| - 3.7 6.2 6.7 7.3 5.2 4.6 1.7 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF308 PF03729.8 gi|518652374|ref|YP_008141894.1| - 0.058 13.3 0.2 0.058 13.3 0.1 1.8 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) UXS1_N PF11803.3 gi|518652374|ref|YP_008141894.1| - 0.066 12.9 0.1 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF4383 PF14325.1 gi|518652374|ref|YP_008141894.1| - 0.07 13.1 1.5 0.11 12.5 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4383) MFS_1 PF07690.11 gi|518652375|ref|YP_008141895.1| - 6.5e-32 110.6 49.0 1.1e-21 76.9 13.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily SBDS PF01172.13 gi|518652376|ref|YP_008141896.1| - 2.3e-21 75.3 0.4 3.9e-21 74.6 0.3 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|518652376|ref|YP_008141896.1| - 4.8e-19 68.2 0.1 7.7e-19 67.6 0.0 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain KH_1 PF00013.24 gi|518652377|ref|YP_008141897.1| - 1.8e-10 40.2 2.0 4.1e-10 39.1 1.4 1.6 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|518652377|ref|YP_008141897.1| - 0.00012 21.6 0.6 0.00034 20.1 0.4 1.8 1 0 0 1 1 1 1 KH domain KH_2 PF07650.12 gi|518652377|ref|YP_008141897.1| - 0.0024 17.3 1.9 0.0044 16.5 0.7 2.0 1 1 1 2 2 2 1 KH domain Peptidase_S24 PF00717.18 gi|518652377|ref|YP_008141897.1| - 0.044 13.4 1.9 0.065 12.8 0.3 2.0 2 0 0 2 2 2 0 Peptidase S24-like RNase_PH PF01138.16 gi|518652378|ref|YP_008141898.1| - 2e-30 105.7 0.1 2.8e-30 105.3 0.1 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|518652378|ref|YP_008141898.1| - 1.8e-13 50.2 0.5 3.3e-13 49.3 0.3 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.16 gi|518652379|ref|YP_008141899.1| - 3.2e-27 95.4 0.0 5.8e-27 94.6 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|518652379|ref|YP_008141899.1| - 8e-14 51.3 0.2 1.6e-13 50.3 0.2 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.14 gi|518652380|ref|YP_008141900.1| - 3.4e-30 103.7 5.4 3.8e-30 103.5 3.8 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Rep_fac-A_C PF08646.5 gi|518652380|ref|YP_008141900.1| - 7.3e-05 22.4 2.9 8.6e-05 22.2 2.0 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain Zn_Tnp_IS1595 PF12760.2 gi|518652380|ref|YP_008141900.1| - 0.0002 21.1 4.8 0.00025 20.7 3.4 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|518652380|ref|YP_008141900.1| - 0.0011 18.6 1.0 0.0018 17.8 0.7 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|518652380|ref|YP_008141900.1| - 0.037 13.9 2.4 0.079 12.9 0.0 2.1 2 0 0 2 2 2 0 Zinc ribbon domain Rubredoxin PF00301.15 gi|518652380|ref|YP_008141900.1| - 0.045 13.6 1.6 6.3 6.7 0.0 2.3 2 0 0 2 2 2 0 Rubredoxin CpXC PF14353.1 gi|518652380|ref|YP_008141900.1| - 0.048 13.6 0.2 0.41 10.6 0.0 2.0 2 0 0 2 2 2 0 CpXC protein Endonuclease_7 PF02945.10 gi|518652380|ref|YP_008141900.1| - 0.051 13.2 0.3 0.076 12.7 0.2 1.3 1 1 0 1 1 1 0 Recombination endonuclease VII RPA_interact_C PF14768.1 gi|518652380|ref|YP_008141900.1| - 0.088 13.2 0.2 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal DUF1131 PF06572.7 gi|518652380|ref|YP_008141900.1| - 0.15 11.5 0.4 0.17 11.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1131) RNA_POL_M_15KD PF02150.11 gi|518652380|ref|YP_008141900.1| - 0.16 11.6 4.2 0.99 9.1 2.9 2.1 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit Mut7-C PF01927.11 gi|518652380|ref|YP_008141900.1| - 0.88 9.5 4.3 9.3 6.2 0.2 2.1 1 1 1 2 2 2 0 Mut7-C RNAse domain C1_4 PF07975.7 gi|518652380|ref|YP_008141900.1| - 1.5 8.8 4.9 2.5 8.1 0.4 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain zinc_ribbon_4 PF13717.1 gi|518652380|ref|YP_008141900.1| - 3.4 7.4 6.0 18 5.1 0.7 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|518652380|ref|YP_008141900.1| - 3.7 8.0 13.0 2.2 8.7 1.0 2.7 2 1 1 3 3 3 0 Zinc-finger double domain UPF0547 PF10571.4 gi|518652380|ref|YP_008141900.1| - 5.9 6.6 7.2 36 4.1 5.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 DNA_RNApol_7kD PF03604.8 gi|518652381|ref|YP_008141901.1| - 0.00016 21.0 3.6 0.00028 20.2 2.5 1.4 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit DUF1922 PF09082.5 gi|518652381|ref|YP_008141901.1| - 0.025 14.6 2.5 0.025 14.6 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) Zn-ribbon_8 PF09723.5 gi|518652381|ref|YP_008141901.1| - 0.086 12.8 2.0 0.14 12.1 1.4 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DUF2072 PF09845.4 gi|518652381|ref|YP_008141901.1| - 0.1 12.5 1.0 0.097 12.5 0.7 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) zf-CSL PF05207.8 gi|518652381|ref|YP_008141901.1| - 2.8 7.5 5.3 41 3.7 3.7 2.0 1 1 0 1 1 1 0 CSL zinc finger MecA_N PF05223.6 gi|518652382|ref|YP_008141902.1| - 0.11 12.6 0.1 0.31 11.1 0.0 1.7 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain Ribosomal_L21e PF01157.13 gi|518652383|ref|YP_008141903.1| - 7.1e-22 77.0 1.0 8.7e-22 76.7 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.11 gi|518652384|ref|YP_008141904.1| - 2.3e-10 40.4 1.7 3.7e-10 39.8 1.2 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb4 DUF655 PF04919.7 gi|518652385|ref|YP_008141905.1| - 1.1e-70 237.0 0.9 1.2e-70 236.9 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.1 gi|518652385|ref|YP_008141905.1| - 0.00018 21.5 0.0 0.0003 20.7 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|518652385|ref|YP_008141905.1| - 0.045 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF3029 PF11230.3 gi|518652385|ref|YP_008141905.1| - 0.049 11.8 0.0 0.068 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3029) RrnaAD PF00398.15 gi|518652386|ref|YP_008141906.1| - 9.9e-51 172.2 0.1 1.2e-50 172.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|518652386|ref|YP_008141906.1| - 3.4e-05 23.8 0.0 4.5e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518652386|ref|YP_008141906.1| - 0.0008 18.8 0.0 0.0017 17.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.14 gi|518652386|ref|YP_008141906.1| - 0.0032 17.0 0.0 0.0055 16.2 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.1 gi|518652386|ref|YP_008141906.1| - 0.0032 17.1 0.0 0.0048 16.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Band_7 PF01145.20 gi|518652387|ref|YP_008141907.1| - 7.5e-31 107.4 2.0 1.1e-30 106.9 1.4 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.1 gi|518652387|ref|YP_008141907.1| - 0.0073 15.8 0.1 0.014 14.9 0.0 1.5 1 1 0 1 1 1 1 SPFH domain-Band 7 family ACP_syn_III_C PF08541.5 gi|518652388|ref|YP_008141908.1| - 3.1e-11 43.1 0.0 9.2e-11 41.6 0.0 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.5 gi|518652388|ref|YP_008141908.1| - 5.4e-06 26.0 0.3 0.001 18.5 0.0 2.1 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal ACP_syn_III PF08545.5 gi|518652388|ref|YP_008141908.1| - 5e-05 22.8 2.9 0.00025 20.6 0.4 2.5 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_N PF01154.12 gi|518652388|ref|YP_008141908.1| - 0.0003 20.3 0.0 0.00057 19.4 0.0 1.4 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thiolase_N PF00108.18 gi|518652388|ref|YP_008141908.1| - 0.0053 15.7 0.1 0.0089 15.0 0.1 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|518652389|ref|YP_008141909.1| - 8.9e-11 41.2 0.1 2.6e-09 36.5 0.0 2.6 2 0 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|518652389|ref|YP_008141909.1| - 6.9e-10 38.3 1.0 1.1e-07 31.1 0.0 2.3 2 0 0 2 2 2 2 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|518652389|ref|YP_008141909.1| - 3e-06 26.9 0.4 3.8e-05 23.3 0.1 2.5 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 gi|518652389|ref|YP_008141909.1| - 0.00025 20.6 0.4 0.21 11.2 0.0 2.6 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF35 PF01796.12 gi|518652390|ref|YP_008141910.1| - 1.9e-18 66.4 0.0 2.5e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|518652390|ref|YP_008141910.1| - 1.9e-08 33.9 0.7 2.9e-08 33.3 0.5 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C3HC4_3 PF13920.1 gi|518652390|ref|YP_008141910.1| - 0.034 13.8 0.9 0.052 13.2 0.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 gi|518652390|ref|YP_008141910.1| - 0.04 13.7 1.0 0.065 13.0 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|518652390|ref|YP_008141910.1| - 0.12 11.6 3.2 2.6 7.4 0.5 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RING_5 PF14634.1 gi|518652390|ref|YP_008141910.1| - 0.15 11.7 2.1 0.24 11.1 1.5 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Zn_Tnp_IS1595 PF12760.2 gi|518652390|ref|YP_008141910.1| - 1.8 8.3 5.7 12 5.8 0.2 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|518652390|ref|YP_008141910.1| - 2.6 8.0 5.8 44 4.1 4.0 2.4 1 1 0 1 1 1 0 Zinc ribbon domain VitK2_biosynth PF02621.9 gi|518652391|ref|YP_008141911.1| - 4e-66 222.7 0.1 4.5e-66 222.6 0.1 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis NMT1 PF09084.6 gi|518652391|ref|YP_008141911.1| - 0.0018 17.8 0.0 0.009 15.6 0.0 1.9 1 1 1 2 2 2 1 NMT1/THI5 like Herpes_ICP4_N PF03584.10 gi|518652391|ref|YP_008141911.1| - 0.061 12.8 0.0 0.14 11.6 0.0 1.6 1 1 0 1 1 1 0 Herpesvirus ICP4-like protein N-terminal region Atg31 PF09795.4 gi|518652391|ref|YP_008141911.1| - 0.65 9.6 3.3 4.2 7.0 0.1 2.2 2 0 0 2 2 2 0 Autophagy-related protein 31 Bac_Ubq_Cox PF01654.12 gi|518652392|ref|YP_008141912.1| - 5.3e-64 216.2 27.3 7e-64 215.8 18.9 1.0 1 0 0 1 1 1 1 Bacterial Cytochrome Ubiquinol Oxidase 7TM_GPCR_Srb PF02175.11 gi|518652392|ref|YP_008141912.1| - 0.016 14.7 0.5 0.016 14.7 0.3 3.3 3 1 0 3 3 3 0 Serpentine type 7TM GPCR chemoreceptor Srb Cyto_ox_2 PF02322.10 gi|518652393|ref|YP_008141913.1| - 0.59 9.2 36.8 0.87 8.6 25.5 1.2 1 0 0 1 1 1 0 Cytochrome oxidase subunit II DinB PF05163.7 gi|518652394|ref|YP_008141914.1| - 1.4e-07 31.4 0.0 1.8e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 DinB family DinB_2 PF12867.2 gi|518652394|ref|YP_008141914.1| - 0.00023 21.4 0.0 0.00035 20.9 0.0 1.2 1 0 0 1 1 1 1 DinB superfamily zf-CDGSH PF09360.5 gi|518652395|ref|YP_008141915.1| - 7.8e-14 51.2 0.7 1.1e-13 50.7 0.5 1.2 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type Carb_kinase PF01256.12 gi|518652396|ref|YP_008141916.1| - 1.5e-39 135.7 0.0 2.2e-39 135.1 0.0 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|518652396|ref|YP_008141916.1| - 3.4e-36 124.3 0.0 5.1e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.10 gi|518652396|ref|YP_008141916.1| - 0.00036 19.7 0.0 0.00056 19.1 0.0 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family AMP-binding PF00501.23 gi|518652397|ref|YP_008141917.1| - 6.7e-15 54.3 0.0 1.8e-12 46.3 0.0 2.2 2 0 0 2 2 2 2 AMP-binding enzyme DUF2593 PF10767.4 gi|518652398|ref|YP_008141918.1| - 0.018 14.7 1.7 0.018 14.7 1.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2593) MtrF PF09472.5 gi|518652398|ref|YP_008141918.1| - 3.1 7.0 5.7 4.8 6.5 0.3 2.5 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) DUF2582 PF10771.4 gi|518652399|ref|YP_008141919.1| - 0.0044 16.8 0.2 0.0044 16.8 0.2 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2582) TrmB PF01978.14 gi|518652399|ref|YP_008141919.1| - 0.0072 16.0 0.4 0.036 13.7 0.1 2.2 1 1 2 3 3 3 1 Sugar-specific transcriptional regulator TrmB Paf1 PF03985.8 gi|518652399|ref|YP_008141919.1| - 0.0096 14.7 0.4 0.012 14.4 0.3 1.1 1 0 0 1 1 1 1 Paf1 MarR_2 PF12802.2 gi|518652399|ref|YP_008141919.1| - 0.013 15.1 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF3918 PF13056.1 gi|518652399|ref|YP_008141919.1| - 0.028 13.7 1.0 0.049 12.9 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) Osmo_CC PF08946.5 gi|518652399|ref|YP_008141919.1| - 0.083 12.9 3.7 0.13 12.3 2.6 1.3 1 0 0 1 1 1 0 Osmosensory transporter coiled coil UPF0147 PF03685.8 gi|518652400|ref|YP_008141920.1| - 1.5e-28 98.4 0.2 1.6e-28 98.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) AsnC_trans_reg PF01037.16 gi|518652401|ref|YP_008141921.1| - 2.6e-18 65.4 0.1 3.6e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 gi|518652401|ref|YP_008141921.1| - 0.0098 15.6 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 GYD domain TK PF00265.13 gi|518652402|ref|YP_008141922.1| - 1.1e-45 155.3 0.0 1.3e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase AAA_14 PF13173.1 gi|518652402|ref|YP_008141922.1| - 0.0016 18.3 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain HTH_45 PF14947.1 gi|518652402|ref|YP_008141922.1| - 0.011 15.5 0.0 1 9.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix AA_kinase PF00696.23 gi|518652403|ref|YP_008141923.1| - 5.4e-07 29.4 0.0 1.6e-06 27.8 0.0 1.7 2 0 0 2 2 2 1 Amino acid kinase family 4HBT PF03061.17 gi|518652404|ref|YP_008141924.1| - 7.4e-15 54.8 0.0 1.1e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.1 gi|518652404|ref|YP_008141924.1| - 0.054 13.9 0.0 0.064 13.7 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily Hjc PF01870.13 gi|518652405|ref|YP_008141925.1| - 4e-18 64.7 0.0 5.6e-18 64.3 0.0 1.2 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Aminotran_3 PF00202.16 gi|518652406|ref|YP_008141926.1| - 1.5e-98 329.8 0.0 1.8e-98 329.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III VIT1 PF01988.14 gi|518652407|ref|YP_008141927.1| - 2e-29 102.6 19.7 1.1e-27 96.9 13.6 2.3 1 1 0 1 1 1 1 VIT family Rubrerythrin PF02915.12 gi|518652407|ref|YP_008141927.1| - 1.5e-09 38.2 5.1 5.1e-09 36.5 3.4 1.8 1 1 0 1 1 1 1 Rubrerythrin Mn_catalase PF05067.7 gi|518652407|ref|YP_008141927.1| - 0.012 14.3 0.4 2.1 7.0 0.0 2.2 2 0 0 2 2 2 0 Manganese containing catalase Ferritin_2 PF13668.1 gi|518652407|ref|YP_008141927.1| - 0.026 14.4 0.2 0.096 12.6 0.1 1.9 1 1 0 1 1 1 0 Ferritin-like domain COQ7 PF03232.8 gi|518652407|ref|YP_008141927.1| - 0.031 13.7 0.2 0.49 9.8 0.0 2.4 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DUF2383 PF09537.5 gi|518652407|ref|YP_008141927.1| - 0.033 14.4 0.9 0.94 9.7 0.1 2.8 1 1 0 2 2 2 0 Domain of unknown function (DUF2383) DUF3231 PF11553.3 gi|518652407|ref|YP_008141927.1| - 0.04 13.4 0.4 0.14 11.6 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3231) ABC_tran PF00005.22 gi|518652408|ref|YP_008141928.1| - 2.3e-25 89.4 0.0 3.7e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518652408|ref|YP_008141928.1| - 2.5e-20 73.6 2.8 1.6e-18 67.7 2.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|518652408|ref|YP_008141928.1| - 3.4e-06 26.3 0.9 0.017 14.2 0.1 2.2 1 1 1 2 2 2 2 AAA ATPase domain Mg_chelatase PF01078.16 gi|518652408|ref|YP_008141928.1| - 4.7e-05 22.6 0.0 7.1e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Arch_ATPase PF01637.13 gi|518652408|ref|YP_008141928.1| - 0.00082 19.1 0.3 0.017 14.8 0.1 2.2 2 1 0 2 2 2 1 Archaeal ATPase SMC_N PF02463.14 gi|518652408|ref|YP_008141928.1| - 0.0011 18.2 0.5 0.15 11.2 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain Rad17 PF03215.10 gi|518652408|ref|YP_008141928.1| - 0.0033 16.1 0.0 0.0059 15.3 0.0 1.4 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein AAA_23 PF13476.1 gi|518652408|ref|YP_008141928.1| - 0.0037 17.6 4.2 0.0097 16.2 2.9 2.0 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|518652408|ref|YP_008141928.1| - 0.004 16.6 0.1 0.38 10.1 0.1 2.2 2 0 0 2 2 2 1 AAA-like domain AAA_17 PF13207.1 gi|518652408|ref|YP_008141928.1| - 0.0051 17.6 0.2 0.011 16.5 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|518652408|ref|YP_008141928.1| - 0.006 16.0 0.7 0.012 15.1 0.3 1.7 1 1 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.24 gi|518652408|ref|YP_008141928.1| - 0.0094 16.1 0.6 0.063 13.4 0.4 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.1 gi|518652408|ref|YP_008141928.1| - 0.011 15.9 0.6 0.04 14.2 0.5 2.1 1 1 0 1 1 1 0 AAA domain MRP-S32 PF10210.4 gi|518652408|ref|YP_008141928.1| - 0.013 15.7 0.0 0.029 14.6 0.0 1.5 2 0 0 2 2 1 0 Mitochondrial 28S ribosomal protein S32 MobB PF03205.9 gi|518652408|ref|YP_008141928.1| - 0.014 15.1 0.1 0.058 13.1 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF258 PF03193.11 gi|518652408|ref|YP_008141928.1| - 0.017 14.3 0.0 0.027 13.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 NTPase_1 PF03266.10 gi|518652408|ref|YP_008141928.1| - 0.026 14.2 0.7 2.4 7.8 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_22 PF13401.1 gi|518652408|ref|YP_008141928.1| - 0.035 14.2 0.3 0.23 11.6 0.2 2.2 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|518652408|ref|YP_008141928.1| - 0.043 13.5 1.0 0.094 12.4 0.3 1.8 1 1 1 2 2 2 0 Part of AAA domain AAA_13 PF13166.1 gi|518652408|ref|YP_008141928.1| - 0.047 12.1 2.8 0.31 9.4 0.1 2.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|518652408|ref|YP_008141928.1| - 0.058 13.0 0.3 0.13 11.9 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_14 PF13173.1 gi|518652408|ref|YP_008141928.1| - 0.073 12.9 0.5 0.22 11.4 0.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|518652408|ref|YP_008141928.1| - 0.079 12.9 0.0 0.13 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain T2SE PF00437.15 gi|518652408|ref|YP_008141928.1| - 0.11 11.3 2.4 0.13 11.1 0.3 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.1 gi|518652408|ref|YP_008141928.1| - 0.12 12.2 0.1 0.53 10.1 0.1 2.0 2 1 1 3 3 3 0 AAA domain AAA_30 PF13604.1 gi|518652408|ref|YP_008141928.1| - 0.18 11.3 0.1 0.41 10.1 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.1 gi|518652408|ref|YP_008141928.1| - 0.19 11.6 0.1 0.37 10.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF2074 PF09847.4 gi|518652409|ref|YP_008141929.1| - 4.8e-66 223.3 85.9 5.9e-66 223.0 59.6 1.0 1 0 0 1 1 1 1 Predicted permease (DUF2074) Ribosomal_S19e PF01090.14 gi|518652410|ref|YP_008141930.1| - 7.5e-50 167.9 0.1 8.6e-50 167.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e BRX_N PF13713.1 gi|518652410|ref|YP_008141930.1| - 0.016 14.6 0.2 0.03 13.7 0.2 1.4 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain HTH_12 PF08461.5 gi|518652410|ref|YP_008141930.1| - 0.027 14.1 0.1 0.1 12.3 0.0 2.0 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain Glyco_hydro_42M PF08532.5 gi|518652410|ref|YP_008141930.1| - 0.075 12.1 0.0 0.096 11.8 0.0 1.2 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain dsDNA_bind PF01984.15 gi|518652411|ref|YP_008141931.1| - 7.2e-29 99.9 14.8 8.9e-29 99.6 10.2 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Ribosomal_L39 PF00832.15 gi|518652412|ref|YP_008141932.1| - 4.3e-19 67.7 12.5 5.1e-19 67.4 8.7 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.14 gi|518652413|ref|YP_008141933.1| - 2.6e-18 65.4 0.4 3e-18 65.2 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.13 gi|518652414|ref|YP_008141934.1| - 1.3e-60 203.9 0.8 1.6e-60 203.6 0.6 1.1 1 0 0 1 1 1 1 eIF-6 family Pribosyltran PF00156.22 gi|518652415|ref|YP_008141935.1| - 3.4e-11 42.9 0.8 5.2e-11 42.3 0.5 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain OMPdecase PF00215.19 gi|518652416|ref|YP_008141936.1| - 1.5e-28 99.7 0.0 1.9e-28 99.3 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family FMN_dh PF01070.13 gi|518652416|ref|YP_008141936.1| - 0.013 14.4 0.2 0.068 12.0 0.1 1.9 1 1 1 2 2 2 0 FMN-dependent dehydrogenase Peptidase_S49 PF01343.13 gi|518652417|ref|YP_008141937.1| - 1.1e-43 148.6 0.0 1.7e-43 148.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.18 gi|518652417|ref|YP_008141937.1| - 1.1e-11 44.7 0.9 5.5e-08 32.6 0.1 2.2 2 0 0 2 2 2 2 Clp protease ECH PF00378.15 gi|518652417|ref|YP_008141937.1| - 0.00052 19.2 0.1 0.026 13.6 0.0 2.3 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase family TORC_N PF12884.2 gi|518652417|ref|YP_008141937.1| - 0.067 13.7 0.2 0.16 12.5 0.2 1.7 1 1 0 1 1 1 0 Transducer of regulated CREB activity, N terminus DBI_PRT PF02277.12 gi|518652418|ref|YP_008141938.1| - 1.9e-09 37.0 0.0 2.8e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyltransferase SBP_bac_7 PF03480.8 gi|518652418|ref|YP_008141938.1| - 0.082 12.0 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 CobD_Cbib PF03186.8 gi|518652419|ref|YP_008141939.1| - 1e-73 248.0 0.4 1.4e-73 247.5 0.3 1.2 1 0 0 1 1 1 1 CobD/Cbib protein PsbT PF01405.12 gi|518652419|ref|YP_008141939.1| - 0.038 13.5 0.8 0.038 13.5 0.6 3.2 3 0 0 3 3 3 0 Photosystem II reaction centre T protein GATase_3 PF07685.9 gi|518652420|ref|YP_008141940.1| - 7.2e-36 123.1 0.2 1e-35 122.6 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|518652420|ref|YP_008141940.1| - 4e-22 78.5 0.0 6.6e-22 77.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|518652420|ref|YP_008141940.1| - 1.6e-11 44.1 0.0 2.6e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain MobB PF03205.9 gi|518652420|ref|YP_008141940.1| - 3.4e-06 26.8 0.0 0.00063 19.4 0.0 2.6 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SNO PF01174.14 gi|518652420|ref|YP_008141940.1| - 0.0053 16.4 0.1 0.0097 15.5 0.1 1.3 1 0 0 1 1 1 1 SNO glutamine amidotransferase family AAA_10 PF12846.2 gi|518652420|ref|YP_008141940.1| - 0.01 15.2 0.0 0.015 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_31 PF13614.1 gi|518652420|ref|YP_008141940.1| - 0.031 14.2 1.5 0.081 12.8 0.1 2.4 2 1 0 2 2 2 0 AAA domain GATase PF00117.23 gi|518652420|ref|YP_008141940.1| - 0.035 13.5 0.1 0.21 11.0 0.0 2.0 2 0 0 2 2 2 0 Glutamine amidotransferase class-I Aminotran_1_2 PF00155.16 gi|518652422|ref|YP_008141942.1| - 2.2e-17 63.0 0.0 3.7e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II DUF2418 PF10332.4 gi|518652422|ref|YP_008141942.1| - 0.038 14.2 0.1 2.4 8.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2418) Reo_sigmaC PF04582.7 gi|518652423|ref|YP_008141943.1| - 0.089 11.9 6.5 0.82 8.7 0.3 2.1 2 0 0 2 2 2 0 Reovirus sigma C capsid protein Fijivirus_P9-2 PF06837.6 gi|518652423|ref|YP_008141943.1| - 1.1 8.3 4.0 0.5 9.4 0.1 2.4 2 1 0 3 3 3 0 Fijivirus P9-2 protein OrfB_Zn_ribbon PF07282.6 gi|518652424|ref|YP_008141944.1| - 3.7e-22 77.7 0.1 6.5e-22 76.9 0.1 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518652424|ref|YP_008141944.1| - 1.5e-11 44.1 0.2 2.4e-11 43.4 0.1 1.3 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.7 gi|518652424|ref|YP_008141944.1| - 0.064 12.5 0.3 0.12 11.7 0.2 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding Plug PF07715.10 gi|518652425|ref|YP_008141945.1| - 0.031 14.5 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 TonB-dependent Receptor Plug Domain NTP_transferase PF00483.18 gi|518652426|ref|YP_008141946.1| - 1.6e-44 152.0 0.0 2e-44 151.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|518652426|ref|YP_008141946.1| - 1.9e-07 31.2 0.0 2.4e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.19 gi|518652426|ref|YP_008141946.1| - 5.1e-05 22.5 6.8 0.0043 16.4 0.4 4.2 1 1 2 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Parvo_coat_N PF08398.5 gi|518652426|ref|YP_008141946.1| - 0.15 11.8 0.1 4.4 7.1 0.0 2.3 2 0 0 2 2 2 0 Parvovirus coat protein VP1 Hexapep_2 PF14602.1 gi|518652426|ref|YP_008141946.1| - 9 5.9 8.8 3.7 7.1 0.3 3.5 3 1 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase SBP_bac_5 PF00496.17 gi|518652427|ref|YP_008141947.1| - 1.2e-21 76.9 2.9 2.7e-21 75.8 2.0 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF3970 PF13113.1 gi|518652428|ref|YP_008141948.1| - 0.027 14.1 0.8 0.79 9.4 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3970) BPD_transp_1 PF00528.17 gi|518652430|ref|YP_008141950.1| - 7.3e-05 22.3 22.8 7.3e-05 22.3 15.8 3.3 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component Acetyltransf_4 PF13420.1 gi|518652431|ref|YP_008141951.1| - 2.2e-17 63.4 0.1 2.5e-17 63.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518652431|ref|YP_008141951.1| - 4.3e-14 52.3 0.1 6.4e-14 51.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518652431|ref|YP_008141951.1| - 3.6e-11 43.2 0.0 4.4e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|518652431|ref|YP_008141951.1| - 1.6e-08 34.5 0.2 3.3e-08 33.5 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|518652431|ref|YP_008141951.1| - 9.5e-08 32.3 0.0 1.3e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|518652431|ref|YP_008141951.1| - 5.1e-06 26.4 0.0 7.6e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|518652431|ref|YP_008141951.1| - 0.0041 17.0 0.0 0.007 16.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518652431|ref|YP_008141951.1| - 0.01 15.5 0.1 0.017 14.8 0.1 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_9 PF13527.1 gi|518652431|ref|YP_008141951.1| - 0.017 15.0 0.0 0.032 14.0 0.0 1.5 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF2156 PF09924.4 gi|518652431|ref|YP_008141951.1| - 0.063 12.1 0.0 0.067 12.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2156) TrmB PF01978.14 gi|518652432|ref|YP_008141952.1| - 0.0005 19.7 0.0 0.00096 18.8 0.0 1.6 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.7 gi|518652432|ref|YP_008141952.1| - 0.014 14.9 0.1 0.021 14.3 0.1 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_5 PF01022.15 gi|518652432|ref|YP_008141952.1| - 0.016 14.8 0.0 0.029 14.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|518652432|ref|YP_008141952.1| - 0.024 13.9 0.5 0.054 12.8 0.1 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|518652432|ref|YP_008141952.1| - 0.028 14.2 0.1 0.057 13.2 0.0 1.6 1 1 1 2 2 2 0 Helix-turn-helix domain PaaX PF07848.7 gi|518652432|ref|YP_008141952.1| - 0.041 13.8 0.0 0.066 13.2 0.0 1.3 1 0 0 1 1 1 0 PaaX-like protein HTH_12 PF08461.5 gi|518652432|ref|YP_008141952.1| - 0.042 13.5 2.6 0.061 13.0 0.0 2.3 3 0 0 3 3 3 0 Ribonuclease R winged-helix domain DUF2250 PF10007.4 gi|518652432|ref|YP_008141952.1| - 0.057 13.3 0.2 0.12 12.2 0.1 1.6 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Rrf2 PF02082.15 gi|518652432|ref|YP_008141952.1| - 0.069 13.2 0.3 0.14 12.2 0.1 1.6 2 0 0 2 2 2 0 Transcriptional regulator DUF4423 PF14394.1 gi|518652432|ref|YP_008141952.1| - 0.072 12.6 0.1 0.22 11.0 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) GntR PF00392.16 gi|518652432|ref|YP_008141952.1| - 0.098 12.1 0.6 0.19 11.1 0.0 1.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, gntR family RPA_C PF08784.6 gi|518652432|ref|YP_008141952.1| - 0.16 12.3 0.2 0.34 11.3 0.1 1.6 2 0 0 2 2 2 0 Replication protein A C terminal RtcB PF01139.12 gi|518652434|ref|YP_008141954.1| - 8.1e-134 446.7 0.0 9e-134 446.5 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB RNA_pol_Rpb1_4 PF05000.12 gi|518652434|ref|YP_008141954.1| - 0.068 12.9 0.5 0.2 11.4 0.4 1.9 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 4 DAHP_synth_1 PF00793.15 gi|518652435|ref|YP_008141955.1| - 7.4e-72 241.2 0.0 9.6e-72 240.9 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.9 gi|518652435|ref|YP_008141955.1| - 4.1e-06 26.1 0.0 1.1e-05 24.7 0.0 1.7 1 1 0 1 1 1 1 NeuB family IGPS PF00218.16 gi|518652436|ref|YP_008141956.1| - 2.1e-42 144.9 0.0 2.6e-42 144.6 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase GATase PF00117.23 gi|518652437|ref|YP_008141957.1| - 2.7e-36 124.8 0.0 3e-36 124.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|518652437|ref|YP_008141957.1| - 9.6e-05 21.9 0.0 0.00029 20.3 0.0 1.7 1 1 0 1 1 1 1 Peptidase C26 GATase_5 PF13507.1 gi|518652437|ref|YP_008141957.1| - 0.0023 16.8 0.1 0.011 14.7 0.0 1.8 1 1 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Chorismate_bind PF00425.13 gi|518652438|ref|YP_008141958.1| - 5e-75 252.1 0.0 6.1e-75 251.8 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme PRAI PF00697.17 gi|518652439|ref|YP_008141959.1| - 1.2e-16 60.8 0.0 2.3e-16 59.9 0.0 1.4 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OKR_DC_1_N PF03709.10 gi|518652439|ref|YP_008141959.1| - 0.047 13.7 0.0 0.28 11.2 0.0 2.0 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain Glycos_transf_3 PF00591.16 gi|518652440|ref|YP_008141960.1| - 1.5e-64 217.8 0.0 1.9e-64 217.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|518652440|ref|YP_008141960.1| - 2.9e-05 23.5 0.1 8.1e-05 22.1 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain MT PF12777.2 gi|518652440|ref|YP_008141960.1| - 0.027 13.2 0.0 0.051 12.3 0.0 1.4 2 0 0 2 2 2 0 Microtubule-binding stalk of dynein motor Trp_syntA PF00290.15 gi|518652441|ref|YP_008141961.1| - 3.4e-26 91.3 0.0 4.5e-26 90.9 0.0 1.1 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|518652441|ref|YP_008141961.1| - 0.018 14.3 0.0 0.03 13.5 0.0 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein SRP1_TIP1 PF00660.12 gi|518652441|ref|YP_008141961.1| - 0.034 13.9 0.2 7.2 6.4 0.0 2.4 2 1 0 2 2 2 0 Seripauperin and TIP1 family Ins_allergen_rp PF06757.8 gi|518652441|ref|YP_008141961.1| - 0.08 12.4 0.1 3.5 7.0 0.0 2.3 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification PALP PF00291.20 gi|518652442|ref|YP_008141962.1| - 8.2e-38 130.3 0.1 1.1e-37 129.8 0.1 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TIM PF00121.13 gi|518652443|ref|YP_008141963.1| - 1.1e-23 83.6 0.6 2.5e-21 75.8 0.4 2.1 1 1 0 1 1 1 1 Triosephosphate isomerase His_biosynth PF00977.16 gi|518652443|ref|YP_008141963.1| - 4.9e-05 22.7 0.1 9.7e-05 21.7 0.0 1.5 1 1 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|518652443|ref|YP_008141963.1| - 0.0055 15.8 0.3 0.0095 15.0 0.2 1.3 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.13 gi|518652443|ref|YP_008141963.1| - 0.045 12.5 0.8 0.072 11.9 0.4 1.4 2 0 0 2 2 2 0 FMN-dependent dehydrogenase DHDPS PF00701.17 gi|518652443|ref|YP_008141963.1| - 0.086 11.4 0.3 0.17 10.4 0.2 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family IGPS PF00218.16 gi|518652443|ref|YP_008141963.1| - 0.092 11.7 0.0 0.15 11.0 0.0 1.4 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase EAL PF00563.15 gi|518652443|ref|YP_008141963.1| - 0.14 11.5 0.0 0.3 10.5 0.0 1.4 1 1 1 2 2 2 0 EAL domain Bac_rhodopsin PF01036.13 gi|518652444|ref|YP_008141964.1| - 0.0035 16.6 6.8 0.0061 15.9 4.7 1.3 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Trehalose_recp PF06151.8 gi|518652444|ref|YP_008141964.1| - 0.053 11.8 1.8 0.08 11.2 1.2 1.2 1 0 0 1 1 1 0 Trehalose receptor RBP_receptor PF14752.1 gi|518652444|ref|YP_008141964.1| - 2.1 6.5 6.8 2.8 6.1 4.7 1.1 1 0 0 1 1 1 0 Retinol binding protein receptor DrsE PF02635.10 gi|518652445|ref|YP_008141965.1| - 9e-18 64.4 0.1 1.1e-17 64.2 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF2031 PF09592.5 gi|518652445|ref|YP_008141965.1| - 0.028 13.5 0.2 0.03 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2031) tRNA-synt_2b PF00587.20 gi|518652446|ref|YP_008141966.1| - 8.7e-31 106.8 0.0 1.9e-30 105.6 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|518652446|ref|YP_008141966.1| - 6.4e-18 64.4 0.4 1.2e-17 63.5 0.3 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.9 gi|518652446|ref|YP_008141966.1| - 2.4e-13 49.7 0.1 3.1e-12 46.1 0.0 2.4 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain Zn-ribbon_8 PF09723.5 gi|518652446|ref|YP_008141966.1| - 0.00043 20.1 1.9 0.00099 19.0 1.3 1.6 1 0 0 1 1 1 1 Zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|518652446|ref|YP_008141966.1| - 0.0012 18.5 0.4 0.0024 17.4 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.14 gi|518652446|ref|YP_008141966.1| - 0.0081 15.8 0.5 0.015 14.9 0.4 1.3 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family zf-ribbon_3 PF13248.1 gi|518652446|ref|YP_008141966.1| - 0.013 14.6 1.7 0.34 10.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|518652446|ref|YP_008141966.1| - 0.06 13.1 0.6 0.11 12.3 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon Ribosomal_L37ae PF01780.14 gi|518652446|ref|YP_008141966.1| - 0.088 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Ribosomal L37ae protein family TF_Zn_Ribbon PF08271.7 gi|518652446|ref|YP_008141966.1| - 0.13 11.6 1.8 0.76 9.1 0.1 2.6 1 1 0 2 2 2 0 TFIIB zinc-binding C1_1 PF00130.17 gi|518652446|ref|YP_008141966.1| - 0.24 11.1 1.1 0.42 10.3 0.8 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_2 PF13465.1 gi|518652446|ref|YP_008141966.1| - 1 9.7 3.1 8.6 6.8 0.1 2.5 2 0 0 2 2 2 0 Zinc-finger double domain GCV_H PF01597.14 gi|518652447|ref|YP_008141967.1| - 1.5e-37 128.0 0.6 1.6e-37 127.8 0.4 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.17 gi|518652447|ref|YP_008141967.1| - 0.086 12.4 0.4 0.23 11.0 0.1 1.8 2 0 0 2 2 2 0 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|518652447|ref|YP_008141967.1| - 0.1 12.2 0.3 0.47 10.1 0.0 2.1 2 1 1 3 3 3 0 Biotin-lipoyl like FtsJ PF01728.14 gi|518652448|ref|YP_008141968.1| - 3.6e-46 157.4 0.0 4e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase UPF0146 PF03686.8 gi|518652448|ref|YP_008141968.1| - 0.081 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Methyltransf_23 PF13489.1 gi|518652448|ref|YP_008141968.1| - 0.13 11.9 0.0 0.21 11.3 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Thioredoxin_6 PF13848.1 gi|518652449|ref|YP_008141969.1| - 0.0016 18.3 1.1 0.0027 17.5 0.8 1.5 1 0 0 1 1 1 1 Thioredoxin-like domain DUF1743 PF08489.6 gi|518652449|ref|YP_008141969.1| - 0.1 12.3 0.1 0.23 11.2 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) HTH_3 PF01381.17 gi|518652450|ref|YP_008141970.1| - 2.8e-09 36.6 0.5 1.1e-08 34.7 0.2 2.0 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|518652450|ref|YP_008141970.1| - 3.1e-07 30.3 1.1 1.8e-06 27.8 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|518652450|ref|YP_008141970.1| - 0.00033 20.2 0.1 0.0023 17.5 0.0 2.3 2 0 0 2 2 2 1 HTH domain HTH_31 PF13560.1 gi|518652450|ref|YP_008141970.1| - 0.0072 16.4 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|518652450|ref|YP_008141970.1| - 0.011 15.4 0.0 0.048 13.3 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain Ribosomal_S8 PF00410.14 gi|518652450|ref|YP_008141970.1| - 0.04 13.7 0.1 0.11 12.3 0.0 1.7 1 1 0 1 1 1 0 Ribosomal protein S8 HTH_38 PF13936.1 gi|518652450|ref|YP_008141970.1| - 0.073 12.6 0.1 0.2 11.2 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain EcoRII-N PF09217.5 gi|518652451|ref|YP_008141971.1| - 0.063 12.8 0.4 0.11 12.0 0.2 1.5 1 1 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal 2-Hacid_dh_C PF02826.14 gi|518652452|ref|YP_008141972.1| - 1.3e-47 161.2 0.1 8.6e-47 158.5 0.0 1.9 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|518652452|ref|YP_008141972.1| - 1.8e-34 118.0 0.3 2.2e-34 117.8 0.2 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.12 gi|518652452|ref|YP_008141972.1| - 0.0025 18.1 1.8 2.2 8.7 0.2 2.9 2 1 0 2 2 2 2 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|518652452|ref|YP_008141972.1| - 0.0044 16.8 0.3 0.036 13.9 0.0 2.3 2 1 1 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.16 gi|518652452|ref|YP_008141972.1| - 0.0073 16.1 1.0 0.05 13.4 0.0 2.3 2 1 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF3157 PF11355.3 gi|518652452|ref|YP_008141972.1| - 0.017 14.4 0.1 0.033 13.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) Gp_dh_N PF00044.19 gi|518652452|ref|YP_008141972.1| - 0.16 11.9 1.9 0.22 11.4 0.2 2.2 2 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aminotran_5 PF00266.14 gi|518652453|ref|YP_008141973.1| - 1.6e-24 86.3 0.1 2e-24 86.0 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|518652453|ref|YP_008141973.1| - 3.8e-07 28.7 0.2 6.4e-07 27.9 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|518652453|ref|YP_008141973.1| - 8.3e-07 28.2 0.0 2.6e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II OKR_DC_1 PF01276.15 gi|518652453|ref|YP_008141973.1| - 0.038 12.5 0.3 1.5 7.2 0.0 2.1 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, major domain tRNA-synt_2c PF01411.14 gi|518652454|ref|YP_008141974.1| - 1.1e-15 57.0 0.1 1.9e-15 56.2 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|518652454|ref|YP_008141974.1| - 6e-11 42.0 0.2 1e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DDE_Tnp_1 PF01609.16 gi|518652455|ref|YP_008141975.1| - 1.2e-13 51.1 0.0 2.3e-13 50.1 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain ANF_receptor PF01094.23 gi|518652455|ref|YP_008141975.1| - 0.012 14.3 0.0 0.021 13.6 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region Thioredoxin_3 PF13192.1 gi|518652456|ref|YP_008141976.1| - 3.5e-25 87.6 1.4 1.7e-16 59.7 0.1 2.2 2 0 0 2 2 2 2 Thioredoxin domain Glutaredoxin PF00462.19 gi|518652456|ref|YP_008141976.1| - 5.6e-12 45.4 1.8 1.5e-05 24.8 0.1 2.6 2 0 0 2 2 2 2 Glutaredoxin Thioredoxin PF00085.15 gi|518652456|ref|YP_008141976.1| - 1.8e-08 33.9 1.4 4.4e-05 23.0 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.1 gi|518652456|ref|YP_008141976.1| - 1.9e-05 24.8 5.1 0.49 10.6 0.2 3.9 2 2 0 2 2 2 2 Thioredoxin-like domain Thioredoxin_4 PF13462.1 gi|518652456|ref|YP_008141976.1| - 0.00029 20.8 4.9 0.086 12.8 0.0 3.4 2 2 1 3 3 3 2 Thioredoxin Thioredoxin_9 PF14595.1 gi|518652456|ref|YP_008141976.1| - 0.00033 20.2 0.2 0.038 13.5 0.0 2.2 2 0 0 2 2 2 1 Thioredoxin ABC_transp_aux PF09822.4 gi|518652456|ref|YP_008141976.1| - 0.0085 15.5 0.0 0.026 13.9 0.0 1.7 2 0 0 2 2 2 1 ABC-type uncharacterized transport system TraF PF13728.1 gi|518652456|ref|YP_008141976.1| - 0.011 15.2 0.0 0.4 10.1 0.0 2.8 2 1 0 2 2 2 0 F plasmid transfer operon protein HyaE PF07449.6 gi|518652456|ref|YP_008141976.1| - 0.012 15.4 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DSBA PF01323.15 gi|518652456|ref|YP_008141976.1| - 0.11 12.0 0.0 0.44 10.0 0.0 2.0 2 0 0 2 2 2 0 DSBA-like thioredoxin domain DAO PF01266.19 gi|518652457|ref|YP_008141977.1| - 1.3e-62 211.7 0.0 1.5e-62 211.6 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|518652457|ref|YP_008141977.1| - 4.4e-08 33.2 0.5 2e-06 27.8 0.3 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518652457|ref|YP_008141977.1| - 5.6e-08 33.0 0.1 0.004 17.2 0.1 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|518652457|ref|YP_008141977.1| - 1.2e-07 30.6 0.3 0.0014 17.1 0.1 2.4 2 0 0 2 2 2 2 HI0933-like protein NAD_binding_8 PF13450.1 gi|518652457|ref|YP_008141977.1| - 5e-07 29.6 0.4 1.2e-06 28.3 0.3 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|518652457|ref|YP_008141977.1| - 9.8e-07 29.0 0.3 5.1e-05 23.5 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|518652457|ref|YP_008141977.1| - 1.5e-06 27.3 0.2 0.00023 20.1 0.0 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_9 PF13454.1 gi|518652457|ref|YP_008141977.1| - 1.1e-05 25.2 0.0 0.42 10.3 0.0 3.2 3 0 0 3 3 3 2 FAD-NAD(P)-binding FAD_binding_2 PF00890.19 gi|518652457|ref|YP_008141977.1| - 1.4e-05 24.1 0.9 3.4e-05 22.8 0.2 1.7 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.2 gi|518652457|ref|YP_008141977.1| - 5.3e-05 22.4 0.3 0.00019 20.6 0.2 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.12 gi|518652457|ref|YP_008141977.1| - 5.4e-05 22.3 0.3 9.7e-05 21.5 0.2 1.3 1 0 0 1 1 1 1 Thi4 family Amino_oxidase PF01593.19 gi|518652457|ref|YP_008141977.1| - 0.0024 17.0 0.0 0.0084 15.2 0.0 1.7 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase ApbA PF02558.11 gi|518652457|ref|YP_008141977.1| - 0.003 17.0 0.5 0.012 14.9 0.1 2.0 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.14 gi|518652457|ref|YP_008141977.1| - 0.0032 16.5 0.1 0.0057 15.7 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.1 gi|518652457|ref|YP_008141977.1| - 0.0036 16.2 0.3 0.019 13.8 0.0 1.9 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.13 gi|518652457|ref|YP_008141977.1| - 0.0069 16.0 0.1 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|518652457|ref|YP_008141977.1| - 0.01 15.5 0.2 0.022 14.4 0.1 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Trp_halogenase PF04820.9 gi|518652457|ref|YP_008141977.1| - 0.02 13.5 0.2 0.13 10.8 0.1 1.9 2 0 0 2 2 2 0 Tryptophan halogenase GMC_oxred_N PF00732.14 gi|518652457|ref|YP_008141977.1| - 0.021 14.0 0.4 2.8 7.0 0.0 2.4 2 1 0 2 2 2 0 GMC oxidoreductase Lycopene_cycl PF05834.7 gi|518652457|ref|YP_008141977.1| - 0.026 13.4 0.1 0.05 12.5 0.1 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein TrkA_N PF02254.13 gi|518652457|ref|YP_008141977.1| - 0.06 13.3 0.9 0.66 9.9 0.2 2.4 2 0 0 2 2 2 0 TrkA-N domain Methyltransf_20 PF12147.3 gi|518652457|ref|YP_008141977.1| - 0.13 11.1 0.0 0.22 10.3 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase DHquinase_I PF01487.10 gi|518652459|ref|YP_008141979.1| - 6e-22 78.4 0.0 7.4e-22 78.1 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase DAGK_cat PF00781.19 gi|518652459|ref|YP_008141979.1| - 0.16 11.4 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain MarC PF01914.12 gi|518652460|ref|YP_008141980.1| - 3.8e-55 186.1 17.5 4.3e-55 185.9 12.1 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein MscS_TM PF12794.2 gi|518652460|ref|YP_008141980.1| - 0.013 14.1 0.7 0.013 14.1 0.5 2.0 2 1 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 SpoIISA_toxin PF14171.1 gi|518652460|ref|YP_008141980.1| - 2.2 7.4 7.3 0.78 8.9 0.7 2.1 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system DUF3784 PF12650.2 gi|518652460|ref|YP_008141980.1| - 5.1 7.0 16.0 7.3 6.6 2.7 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3784) Mg_chelatase PF01078.16 gi|518652461|ref|YP_008141981.1| - 5.9e-15 54.9 0.0 3.1e-09 36.3 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_32 PF13654.1 gi|518652461|ref|YP_008141981.1| - 3.1e-13 49.2 0.1 1e-08 34.3 0.1 2.7 2 1 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|518652461|ref|YP_008141981.1| - 1.1e-10 41.2 0.0 3.3e-05 23.4 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.9 gi|518652461|ref|YP_008141981.1| - 4.1e-09 36.2 0.0 0.00023 20.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|518652461|ref|YP_008141981.1| - 6.2e-07 28.7 0.0 0.025 13.6 0.0 2.2 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus MCM PF00493.18 gi|518652461|ref|YP_008141981.1| - 3.7e-06 25.9 0.0 0.31 9.7 0.0 3.1 3 0 0 3 3 3 3 MCM2/3/5 family AAA PF00004.24 gi|518652461|ref|YP_008141981.1| - 1.2e-05 25.5 0.0 0.0059 16.7 0.0 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|518652461|ref|YP_008141981.1| - 9.7e-05 22.4 0.0 0.00021 21.3 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.12 gi|518652461|ref|YP_008141981.1| - 0.00011 21.6 0.0 0.00021 20.7 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_22 PF13401.1 gi|518652461|ref|YP_008141981.1| - 0.00012 22.1 0.0 0.072 13.2 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_14 PF13173.1 gi|518652461|ref|YP_008141981.1| - 0.00064 19.6 0.0 2.2 8.2 0.0 3.0 2 1 1 3 3 3 2 AAA domain DZR PF12773.2 gi|518652461|ref|YP_008141981.1| - 0.0025 17.5 0.9 0.0044 16.8 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon AAA_17 PF13207.1 gi|518652461|ref|YP_008141981.1| - 0.012 16.4 0.0 0.04 14.7 0.0 2.0 2 1 0 2 2 2 0 AAA domain zf-ribbon_3 PF13248.1 gi|518652461|ref|YP_008141981.1| - 0.014 14.5 8.6 0.028 13.6 6.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Sigma54_activ_2 PF14532.1 gi|518652461|ref|YP_008141981.1| - 0.016 15.2 0.0 0.082 12.9 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain ABC_tran PF00005.22 gi|518652461|ref|YP_008141981.1| - 0.021 15.0 0.0 0.056 13.7 0.0 1.7 1 0 0 1 1 1 0 ABC transporter TIP49 PF06068.8 gi|518652461|ref|YP_008141981.1| - 0.032 12.9 0.1 0.44 9.1 0.0 2.4 3 0 0 3 3 3 0 TIP49 C-terminus AAA_29 PF13555.1 gi|518652461|ref|YP_008141981.1| - 0.032 13.7 0.0 0.081 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_33 PF13671.1 gi|518652461|ref|YP_008141981.1| - 0.039 13.8 0.0 1.1 9.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|518652461|ref|YP_008141981.1| - 0.042 13.4 0.0 0.12 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.9 gi|518652461|ref|YP_008141981.1| - 0.046 13.6 0.0 4.6 7.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) SMC_N PF02463.14 gi|518652461|ref|YP_008141981.1| - 0.06 12.5 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|518652461|ref|YP_008141981.1| - 0.061 12.7 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain ResIII PF04851.10 gi|518652461|ref|YP_008141981.1| - 0.1 12.3 0.0 0.3 10.8 0.0 1.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_19 PF13245.1 gi|518652461|ref|YP_008141981.1| - 0.1 12.3 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain RecR PF02132.10 gi|518652461|ref|YP_008141981.1| - 0.23 10.9 0.9 0.41 10.1 0.7 1.4 1 0 0 1 1 1 0 RecR protein zinc_ribbon_2 PF13240.1 gi|518652461|ref|YP_008141981.1| - 0.24 10.9 8.0 0.51 9.8 5.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain DUF35_N PF12172.3 gi|518652461|ref|YP_008141981.1| - 0.25 11.3 1.7 0.48 10.3 1.2 1.4 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ISL3 PF14690.1 gi|518652461|ref|YP_008141981.1| - 0.55 10.2 3.0 26 4.9 0.1 2.9 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-RanBP PF00641.13 gi|518652461|ref|YP_008141981.1| - 1.5 7.9 4.9 2.8 7.1 3.4 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Toprim_4 PF13662.1 gi|518652462|ref|YP_008141982.1| - 9.2e-10 38.4 0.2 4.3e-09 36.2 0.1 2.2 2 0 0 2 2 2 1 Toprim domain Toprim PF01751.17 gi|518652462|ref|YP_008141982.1| - 9.2e-05 22.3 0.0 9.2e-05 22.3 0.0 2.5 3 0 0 3 3 3 1 Toprim domain Toprim_2 PF13155.1 gi|518652462|ref|YP_008141982.1| - 0.012 15.9 0.1 0.043 14.1 0.0 2.1 2 0 0 2 2 2 0 Toprim-like AP_endonuc_2 PF01261.19 gi|518652463|ref|YP_008141983.1| - 1.4e-12 47.3 0.0 2.1e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF3198 PF11433.3 gi|518652465|ref|YP_008141985.1| - 1.2e-15 57.0 2.0 1.8e-15 56.5 1.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3198) MIF4G_like_2 PF09090.6 gi|518652465|ref|YP_008141985.1| - 0.0066 15.7 0.4 0.0088 15.2 0.3 1.1 1 0 0 1 1 1 1 MIF4G like Ndc1_Nup PF09531.5 gi|518652465|ref|YP_008141985.1| - 0.049 12.0 2.5 0.053 11.9 1.7 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup VanZ PF04892.7 gi|518652465|ref|YP_008141985.1| - 0.18 11.7 5.8 0.22 11.4 4.0 1.1 1 0 0 1 1 1 0 VanZ like family Wzz PF02706.10 gi|518652465|ref|YP_008141985.1| - 0.45 10.3 0.1 0.45 10.3 0.0 1.9 2 0 0 2 2 2 0 Chain length determinant protein Col_cuticle_N PF01484.12 gi|518652465|ref|YP_008141985.1| - 5 6.8 6.2 4.3 7.1 0.1 2.2 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ATP-synt_8 PF00895.15 gi|518652465|ref|YP_008141985.1| - 6.3 7.0 14.8 5.8 7.1 2.9 2.3 1 1 1 2 2 2 0 ATP synthase protein 8 Spermine_synth PF01564.12 gi|518652466|ref|YP_008141986.1| - 2e-74 249.6 0.0 2.5e-74 249.3 0.0 1.0 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_18 PF12847.2 gi|518652466|ref|YP_008141986.1| - 3e-05 24.5 0.0 5.1e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|518652466|ref|YP_008141986.1| - 0.00055 19.9 0.0 0.00087 19.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_30 PF05430.6 gi|518652466|ref|YP_008141986.1| - 0.0074 15.9 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_24 PF13578.1 gi|518652466|ref|YP_008141986.1| - 0.034 14.9 0.0 0.076 13.8 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain Bac_DNA_binding PF00216.16 gi|518652467|ref|YP_008141987.1| - 8.9e-22 76.9 5.8 1.1e-21 76.6 4.0 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein Peptidase_M22 PF00814.20 gi|518652468|ref|YP_008141988.1| - 1e-81 274.4 0.0 1.4e-81 273.9 0.0 1.2 1 0 0 1 1 1 1 Glycoprotease family Kdo PF06293.9 gi|518652468|ref|YP_008141988.1| - 1.9e-09 36.8 0.0 3.4e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.17 gi|518652468|ref|YP_008141988.1| - 3.4e-08 33.0 0.2 8.3e-08 31.8 0.1 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|518652468|ref|YP_008141988.1| - 0.0018 17.5 0.2 0.003 16.7 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|518652468|ref|YP_008141988.1| - 0.021 14.5 0.1 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.15 gi|518652468|ref|YP_008141988.1| - 0.024 14.2 0.9 0.068 12.7 0.5 1.8 1 1 0 1 1 1 0 Choline/ethanolamine kinase Ham1p_like PF01725.11 gi|518652469|ref|YP_008141989.1| - 5e-44 149.9 0.0 5.7e-44 149.7 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF4367 PF14285.1 gi|518652469|ref|YP_008141989.1| - 0.11 11.8 0.5 2.1 7.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4367) Ribosomal_S6e PF01092.14 gi|518652470|ref|YP_008141990.1| - 6.6e-22 77.4 0.8 8.3e-22 77.1 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|518652471|ref|YP_008141991.1| - 1.8e-43 148.1 0.8 2.7e-43 147.6 0.6 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|518652471|ref|YP_008141991.1| - 1.9e-29 101.5 0.1 4.2e-29 100.4 0.1 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal MMR_HSR1 PF01926.18 gi|518652471|ref|YP_008141991.1| - 0.0001 22.2 0.0 0.00028 20.8 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.20 gi|518652471|ref|YP_008141991.1| - 0.0002 21.4 0.1 0.00063 19.7 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 PduV-EutP PF10662.4 gi|518652471|ref|YP_008141991.1| - 0.0025 17.3 0.9 1.2 8.6 0.2 2.5 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.13 gi|518652471|ref|YP_008141991.1| - 0.015 14.5 1.0 5.2 6.3 0.1 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B ArgK PF03308.11 gi|518652471|ref|YP_008141991.1| - 0.057 12.1 0.6 0.23 10.2 0.1 2.0 2 0 0 2 2 2 0 ArgK protein DUF4124 PF13511.1 gi|518652471|ref|YP_008141991.1| - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4124) DUF357 PF04010.8 gi|518652472|ref|YP_008141992.1| - 5.1e-24 83.7 3.2 5.9e-24 83.5 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) RmuC PF02646.11 gi|518652473|ref|YP_008141993.1| - 8e-64 215.3 0.1 1.2e-63 214.7 0.1 1.2 1 0 0 1 1 1 1 RmuC family APG17 PF04108.7 gi|518652473|ref|YP_008141993.1| - 0.00012 20.9 4.9 0.065 12.0 1.0 2.2 2 0 0 2 2 2 2 Autophagy protein Apg17 Syntaxin_2 PF14523.1 gi|518652473|ref|YP_008141993.1| - 0.0015 18.5 7.1 0.045 13.7 0.3 3.0 3 0 0 3 3 3 1 Syntaxin-like protein Endonuc-FokI_C PF09254.6 gi|518652473|ref|YP_008141993.1| - 0.0018 17.3 0.0 0.0043 16.1 0.0 1.6 1 0 0 1 1 1 1 Restriction endonuclease FokI, C terminal DUF2383 PF09537.5 gi|518652473|ref|YP_008141993.1| - 0.0027 17.9 0.2 0.13 12.4 0.0 2.9 2 0 0 2 2 2 1 Domain of unknown function (DUF2383) DASH_Duo1 PF08651.5 gi|518652473|ref|YP_008141993.1| - 0.0051 16.3 1.0 4.3 6.9 0.0 3.0 2 1 1 3 3 3 2 DASH complex subunit Duo1 DUF2232 PF09991.4 gi|518652473|ref|YP_008141993.1| - 0.031 13.2 2.6 2.8 6.8 0.0 2.3 2 0 0 2 2 2 0 Predicted membrane protein (DUF2232) DUF3584 PF12128.3 gi|518652473|ref|YP_008141993.1| - 0.031 11.6 0.9 1.9 5.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) MscS_porin PF12795.2 gi|518652473|ref|YP_008141993.1| - 0.035 13.4 0.1 0.22 10.8 0.0 2.0 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Baculo_PEP_C PF04513.7 gi|518652473|ref|YP_008141993.1| - 0.039 13.7 4.8 0.24 11.2 0.4 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BCAS2 PF05700.6 gi|518652473|ref|YP_008141993.1| - 0.042 13.3 0.2 0.084 12.3 0.1 1.5 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) DUF4460 PF14687.1 gi|518652473|ref|YP_008141993.1| - 0.043 13.5 1.8 0.89 9.3 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4460) Sec8_exocyst PF04048.9 gi|518652473|ref|YP_008141993.1| - 0.05 13.2 0.3 1.6 8.3 0.0 2.5 2 0 0 2 2 2 0 Sec8 exocyst complex component specific domain BLOC1_2 PF10046.4 gi|518652473|ref|YP_008141993.1| - 0.054 13.6 2.0 1 9.5 0.1 2.6 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.7 gi|518652473|ref|YP_008141993.1| - 0.11 12.3 1.5 1.3 8.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.5 gi|518652473|ref|YP_008141993.1| - 0.11 12.6 4.4 0.61 10.2 0.4 2.4 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family P4Ha_N PF08336.6 gi|518652473|ref|YP_008141993.1| - 0.12 12.1 4.1 0.99 9.2 0.1 3.2 2 2 1 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region H-kinase_dim PF02895.9 gi|518652473|ref|YP_008141993.1| - 0.18 12.1 1.5 18 5.7 0.4 2.5 2 1 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain DUF948 PF06103.6 gi|518652473|ref|YP_008141993.1| - 0.23 11.3 3.6 0.89 9.4 0.2 3.0 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Syntaxin PF00804.20 gi|518652473|ref|YP_008141993.1| - 0.36 11.0 4.5 10 6.3 0.5 2.6 2 1 0 2 2 2 0 Syntaxin CENP-F_leu_zip PF10473.4 gi|518652473|ref|YP_008141993.1| - 0.62 9.9 4.7 0.97 9.2 1.4 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 UPF0118 PF01594.11 gi|518652473|ref|YP_008141993.1| - 3 6.7 5.8 4.5 6.1 0.3 2.5 3 0 0 3 3 3 0 Domain of unknown function DUF20 DUF619 PF04768.8 gi|518652474|ref|YP_008141994.1| - 0.073 12.4 0.0 0.14 11.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF619) DUF2614 PF11023.3 gi|518652475|ref|YP_008141995.1| - 0.045 13.5 4.5 2.2 8.1 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2614) DUF2905 PF11146.3 gi|518652475|ref|YP_008141995.1| - 0.071 13.0 6.0 0.62 10.0 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2905) DUF2371 PF10177.4 gi|518652475|ref|YP_008141995.1| - 0.11 12.3 2.1 0.51 10.1 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) DUF3040 PF11239.3 gi|518652475|ref|YP_008141995.1| - 0.25 11.4 2.8 4.3 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Gram_pos_anchor PF00746.16 gi|518652475|ref|YP_008141995.1| - 0.34 10.7 2.3 6 6.8 0.2 2.6 2 0 0 2 2 2 0 Gram positive anchor DUF3185 PF11381.3 gi|518652475|ref|YP_008141995.1| - 4.2 7.1 13.8 2.5 7.9 1.2 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3185) MFS_1 PF07690.11 gi|518652476|ref|YP_008141996.1| - 6.3e-36 123.8 48.9 2.7e-34 118.4 25.6 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1275 PF06912.6 gi|518652476|ref|YP_008141996.1| - 0.00029 20.1 2.0 0.00029 20.1 1.4 4.3 3 1 0 3 3 3 1 Protein of unknown function (DUF1275) DUF3487 PF11990.3 gi|518652476|ref|YP_008141996.1| - 0.05 12.9 0.4 0.05 12.9 0.3 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF3487) DUF488 PF04343.8 gi|518652477|ref|YP_008141997.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 DUF2080 PF09853.4 gi|518652478|ref|YP_008141998.1| - 4.7e-14 51.8 0.3 5e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) HTH_10 PF04967.7 gi|518652479|ref|YP_008141999.1| - 1.2e-11 43.9 0.0 2.5e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain Cytochrom_B561 PF03188.11 gi|518652480|ref|YP_008142000.1| - 0.23 11.2 14.2 0.12 12.1 0.6 3.1 2 1 1 3 3 3 0 Eukaryotic cytochrome b561 Fer4_9 PF13187.1 gi|518652481|ref|YP_008142001.1| - 0.0007 19.8 6.1 0.043 14.0 0.1 3.0 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|518652481|ref|YP_008142001.1| - 0.0022 17.8 2.5 0.0022 17.8 1.8 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|518652481|ref|YP_008142001.1| - 0.0032 17.7 10.7 0.041 14.2 0.3 3.0 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518652481|ref|YP_008142001.1| - 0.0057 16.4 8.2 0.0082 15.9 4.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_5 PF12801.2 gi|518652481|ref|YP_008142001.1| - 0.019 14.7 0.5 0.019 14.7 0.3 5.5 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|518652481|ref|YP_008142001.1| - 0.023 15.1 6.9 0.89 10.0 0.2 3.2 3 0 0 3 3 3 0 4Fe-4S dicluster domain DUF4428 PF14471.1 gi|518652481|ref|YP_008142001.1| - 0.047 13.4 1.0 0.098 12.4 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) Fer4_8 PF13183.1 gi|518652481|ref|YP_008142001.1| - 0.63 10.1 7.4 1.6 8.8 0.1 2.8 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518652481|ref|YP_008142001.1| - 1.2 9.5 11.8 2.8 8.3 0.3 3.2 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518652481|ref|YP_008142001.1| - 2.2 8.3 9.4 0.21 11.5 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain PIRT PF15099.1 gi|518652484|ref|YP_008142004.1| - 0.021 14.0 0.7 0.021 14.0 0.5 1.9 1 1 1 2 2 2 0 Phosphoinositide-interacting protein family RseC_MucC PF04246.7 gi|518652484|ref|YP_008142004.1| - 0.3 10.6 1.3 0.32 10.5 0.9 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1469 PF07332.6 gi|518652484|ref|YP_008142004.1| - 0.63 9.7 5.5 0.76 9.5 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF4231 PF14015.1 gi|518652484|ref|YP_008142004.1| - 0.68 9.9 4.2 0.77 9.7 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) TcdA_TcdB_pore PF12920.2 gi|518652484|ref|YP_008142004.1| - 4.1 5.2 5.4 4.5 5.0 3.7 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF929 PF06053.6 gi|518652487|ref|YP_008142007.1| - 4.6e-42 143.8 5.2 5.2e-42 143.6 3.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) COX1 PF00115.15 gi|518652488|ref|YP_008142008.1| - 3.5e-125 418.1 61.3 3.5e-125 418.1 42.5 2.8 3 0 0 3 3 3 2 Cytochrome C and Quinol oxidase polypeptide I Chordopox_A33R PF05966.7 gi|518652488|ref|YP_008142008.1| - 0.37 9.5 0.2 0.73 8.5 0.1 1.5 1 0 0 1 1 1 0 Chordopoxvirus A33R protein SoxE PF06525.6 gi|518652490|ref|YP_008142010.1| - 1.1e-21 77.0 11.3 3.1e-21 75.5 7.8 1.7 1 1 0 1 1 1 1 Sulfocyanin (SoxE) COX2 PF00116.15 gi|518652491|ref|YP_008142011.1| - 7.8e-16 58.0 1.6 5.9e-14 51.9 1.6 2.5 2 1 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain DcuC PF03606.10 gi|518652491|ref|YP_008142011.1| - 0.0035 15.6 0.0 0.0047 15.2 0.0 1.1 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier Lactate_perm PF02652.9 gi|518652491|ref|YP_008142011.1| - 0.044 12.2 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 L-lactate permease DUF3317 PF11779.3 gi|518652491|ref|YP_008142011.1| - 0.27 10.6 3.3 2 7.8 0.2 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3317) UbiA PF01040.13 gi|518652492|ref|YP_008142012.1| - 6.1e-27 94.4 27.8 8e-27 94.0 19.3 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family PHBC_N PF12551.3 gi|518652492|ref|YP_008142012.1| - 0.067 12.7 1.7 0.13 11.8 1.2 1.4 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase N terminal Lactamase_B PF00753.22 gi|518652493|ref|YP_008142013.1| - 1.7e-10 40.8 0.0 4e-10 39.6 0.0 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily DDE_Tnp_1 PF01609.16 gi|518652494|ref|YP_008142014.1| - 4.7e-15 55.6 0.0 9.9e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain ANF_receptor PF01094.23 gi|518652494|ref|YP_008142014.1| - 0.012 14.4 0.0 0.02 13.6 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region DDE_Tnp_1_3 PF13612.1 gi|518652494|ref|YP_008142014.1| - 0.13 12.0 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Transposase DDE domain DDE_5 PF13546.1 gi|518652494|ref|YP_008142014.1| - 0.14 11.0 0.0 0.21 10.3 0.0 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease Ribosomal_L3 PF00297.17 gi|518652495|ref|YP_008142015.1| - 4.2e-59 200.0 2.8 5e-59 199.8 1.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.17 gi|518652496|ref|YP_008142016.1| - 2.6e-32 111.7 0.1 3e-32 111.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.15 gi|518652497|ref|YP_008142017.1| - 3.9e-14 52.3 2.4 7.4e-14 51.4 1.7 1.5 1 1 0 1 1 1 1 Ribosomal protein L23 SIS PF01380.17 gi|518652497|ref|YP_008142017.1| - 0.06 12.9 0.1 0.071 12.7 0.0 1.1 1 0 0 1 1 1 0 SIS domain TMEMspv1-c74-12 PF11044.3 gi|518652497|ref|YP_008142017.1| - 2 8.0 4.7 1 8.9 0.8 2.1 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Ribosomal_L2_C PF03947.13 gi|518652498|ref|YP_008142018.1| - 7.9e-39 132.4 3.0 1.1e-38 131.9 2.1 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|518652498|ref|YP_008142018.1| - 3e-07 30.2 0.1 1.2e-06 28.3 0.0 2.1 1 1 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.16 gi|518652499|ref|YP_008142019.1| - 4.6e-24 83.8 0.8 5.5e-24 83.5 0.1 1.6 2 0 0 2 2 2 1 Ribosomal protein S19 Ribosomal_L22 PF00237.14 gi|518652500|ref|YP_008142020.1| - 3e-23 81.7 0.0 5.3e-23 80.9 0.0 1.4 1 1 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.15 gi|518652501|ref|YP_008142021.1| - 2.2e-13 50.2 2.5 6.2e-13 48.7 0.9 2.0 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|518652501|ref|YP_008142021.1| - 3.4e-10 39.3 0.0 7.5e-10 38.2 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.1 gi|518652501|ref|YP_008142021.1| - 0.0054 16.3 0.0 0.011 15.3 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.24 gi|518652501|ref|YP_008142021.1| - 0.031 13.9 0.2 0.13 11.9 0.0 2.1 2 0 0 2 2 2 0 KH domain Tn916-Xis PF09035.5 gi|518652501|ref|YP_008142021.1| - 0.095 12.8 0.1 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 Excisionase from transposon Tn916 Ribosomal_L29 PF00831.18 gi|518652502|ref|YP_008142022.1| - 4.9e-18 64.5 0.6 5.5e-18 64.4 0.4 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein cwf21 PF08312.7 gi|518652502|ref|YP_008142022.1| - 0.036 13.9 2.7 0.065 13.0 1.8 1.5 1 0 0 1 1 1 0 cwf21 domain SUI1 PF01253.17 gi|518652503|ref|YP_008142023.1| - 3.6e-22 77.9 0.9 4e-22 77.8 0.6 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 UPF0086 PF01868.11 gi|518652504|ref|YP_008142024.1| - 2.3e-18 65.5 0.1 2.6e-18 65.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 KcnmB2_inactiv PF09303.5 gi|518652504|ref|YP_008142024.1| - 0.0026 17.4 1.7 0.015 15.0 0.5 2.1 2 0 0 2 2 2 1 KCNMB2, ball and chain domain SANTA PF09133.5 gi|518652504|ref|YP_008142024.1| - 0.011 15.6 0.3 0.014 15.3 0.2 1.2 1 0 0 1 1 1 0 SANTA (SANT Associated) Ribosomal_S17 PF00366.15 gi|518652505|ref|YP_008142025.1| - 3.4e-20 71.8 5.7 4.3e-20 71.5 4.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L14 PF00238.14 gi|518652506|ref|YP_008142026.1| - 7.6e-32 109.6 0.0 8.4e-32 109.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e KOW PF00467.24 gi|518652507|ref|YP_008142027.1| - 4.2e-05 23.0 3.7 0.0001 21.8 2.5 1.6 1 0 0 1 1 1 1 KOW motif Ribosomal_S4e PF00900.15 gi|518652508|ref|YP_008142028.1| - 4.4e-18 64.7 1.4 9.9e-18 63.5 1.0 1.6 1 0 0 1 1 1 1 Ribosomal family S4e KOW PF00467.24 gi|518652508|ref|YP_008142028.1| - 0.00014 21.4 0.2 0.00014 21.4 0.1 3.0 3 0 0 3 3 3 1 KOW motif S4 PF01479.20 gi|518652508|ref|YP_008142028.1| - 0.00077 18.8 0.2 0.0018 17.6 0.1 1.7 2 0 0 2 2 2 1 S4 domain RS4NT PF08071.7 gi|518652508|ref|YP_008142028.1| - 0.056 13.3 0.5 0.12 12.3 0.3 1.5 1 0 0 1 1 1 0 RS4NT (NUC023) domain Ribosomal_L5_C PF00673.16 gi|518652509|ref|YP_008142029.1| - 1.3e-22 79.3 0.0 3e-22 78.1 0.0 1.6 1 1 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|518652509|ref|YP_008142029.1| - 9.1e-19 66.9 0.4 1.6e-18 66.2 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 SinI PF08671.5 gi|518652509|ref|YP_008142029.1| - 0.088 12.2 0.1 0.21 11.0 0.1 1.7 1 0 0 1 1 1 0 Anti-repressor SinI Ribosomal_S8 PF00410.14 gi|518652510|ref|YP_008142030.1| - 2e-22 79.3 0.1 3e-22 78.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.18 gi|518652511|ref|YP_008142031.1| - 2.2e-16 60.0 4.0 7.5e-08 32.7 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.16 gi|518652511|ref|YP_008142031.1| - 0.055 13.3 0.6 1.3 8.9 0.0 2.9 3 1 0 3 3 3 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.13 gi|518652512|ref|YP_008142032.1| - 1e-37 128.5 0.2 1.4e-37 128.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.15 gi|518652513|ref|YP_008142033.1| - 4e-46 156.4 11.3 4.6e-46 156.2 7.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Moulting_cycle PF04870.11 gi|518652513|ref|YP_008142033.1| - 0.0045 16.0 1.9 0.0045 16.0 1.4 1.5 1 1 0 1 1 1 1 Moulting cycle Ribosomal_L18p PF00861.17 gi|518652514|ref|YP_008142034.1| - 4.6e-19 68.7 0.2 5.9e-19 68.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_S5 PF00333.15 gi|518652515|ref|YP_008142035.1| - 5.4e-24 83.7 0.9 9.6e-24 82.9 0.6 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|518652515|ref|YP_008142035.1| - 1.2e-18 66.1 0.9 2e-18 65.4 0.7 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.15 gi|518652516|ref|YP_008142036.1| - 2.9e-14 52.3 0.2 9.7e-14 50.7 0.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|518652517|ref|YP_008142037.1| - 6e-14 52.5 0.4 7.6e-14 52.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 SecY PF00344.15 gi|518652518|ref|YP_008142038.1| - 4.2e-95 318.5 21.8 4.2e-95 318.5 15.1 2.1 2 0 0 2 2 2 1 SecY translocase Plug_translocon PF10559.4 gi|518652518|ref|YP_008142038.1| - 2.1e-12 46.3 0.8 1.5e-11 43.5 0.6 2.7 1 0 0 1 1 1 1 Plug domain of Sec61p Phage_holin_5 PF06946.6 gi|518652518|ref|YP_008142038.1| - 0.13 12.4 0.1 0.13 12.4 0.1 3.4 3 1 1 4 4 4 0 Phage holin AAA_18 PF13238.1 gi|518652519|ref|YP_008142039.1| - 5e-14 52.7 0.1 6.2e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|518652519|ref|YP_008142039.1| - 8.5e-08 33.0 0.0 1.4e-07 32.3 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|518652519|ref|YP_008142039.1| - 0.00023 21.0 0.1 0.00065 19.5 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.1 gi|518652519|ref|YP_008142039.1| - 0.0012 18.5 1.8 0.0024 17.4 0.4 2.0 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|518652519|ref|YP_008142039.1| - 0.0027 17.5 0.5 0.0054 16.6 0.1 1.7 2 1 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.13 gi|518652519|ref|YP_008142039.1| - 0.004 16.7 0.0 0.0088 15.5 0.0 1.6 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase NTPase_1 PF03266.10 gi|518652519|ref|YP_008142039.1| - 0.0071 16.0 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 NTPase AAA_28 PF13521.1 gi|518652519|ref|YP_008142039.1| - 0.0097 15.8 0.0 0.022 14.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.17 gi|518652519|ref|YP_008142039.1| - 0.011 14.6 0.0 0.014 14.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ArgK PF03308.11 gi|518652519|ref|YP_008142039.1| - 0.021 13.5 0.0 0.032 13.0 0.0 1.3 1 0 0 1 1 1 0 ArgK protein ABC_tran PF00005.22 gi|518652519|ref|YP_008142039.1| - 0.021 15.0 0.1 0.024 14.9 0.0 1.3 1 1 0 1 1 1 0 ABC transporter Miro PF08477.8 gi|518652519|ref|YP_008142039.1| - 0.039 14.4 0.1 0.1 13.0 0.0 1.8 2 0 0 2 2 2 0 Miro-like protein AAA_29 PF13555.1 gi|518652519|ref|YP_008142039.1| - 0.041 13.3 0.1 0.072 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.24 gi|518652519|ref|YP_008142039.1| - 0.056 13.6 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.18 gi|518652519|ref|YP_008142039.1| - 0.061 13.2 0.4 0.1 12.5 0.3 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase CbiA PF01656.18 gi|518652519|ref|YP_008142039.1| - 0.088 12.2 0.5 0.78 9.1 0.4 2.1 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF258 PF03193.11 gi|518652519|ref|YP_008142039.1| - 0.097 11.8 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SKI PF01202.17 gi|518652519|ref|YP_008142039.1| - 0.13 12.0 0.5 0.31 10.9 0.3 1.7 1 1 0 1 1 1 0 Shikimate kinase AAA_23 PF13476.1 gi|518652519|ref|YP_008142039.1| - 0.16 12.2 1.2 2 8.6 0.8 2.1 1 1 0 1 1 1 0 AAA domain DUF106 PF01956.11 gi|518652520|ref|YP_008142040.1| - 1.9e-22 79.5 11.6 1.9e-22 79.5 8.0 1.5 2 0 0 2 2 2 1 Integral membrane protein DUF106 DUF912 PF06024.7 gi|518652520|ref|YP_008142040.1| - 0.04 13.9 0.2 1.6 8.8 0.1 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) DUF4199 PF13858.1 gi|518652520|ref|YP_008142040.1| - 0.56 10.1 19.6 0.043 13.7 5.1 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) Cytidylate_kin2 PF13189.1 gi|518652521|ref|YP_008142041.1| - 6.2e-16 58.8 3.9 2.5e-14 53.5 2.7 2.1 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|518652521|ref|YP_008142041.1| - 7.3e-15 55.4 0.1 1.1e-14 54.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain SKI PF01202.17 gi|518652521|ref|YP_008142041.1| - 9.6e-11 41.7 0.0 1.4e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Shikimate kinase AAA_17 PF13207.1 gi|518652521|ref|YP_008142041.1| - 2.4e-09 38.0 0.4 4.5e-09 37.1 0.3 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|518652521|ref|YP_008142041.1| - 0.00085 19.4 0.0 0.0016 18.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain PRK PF00485.13 gi|518652521|ref|YP_008142041.1| - 0.0022 17.5 2.1 0.0059 16.1 0.3 2.0 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.1 gi|518652521|ref|YP_008142041.1| - 0.0025 17.8 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.1 gi|518652521|ref|YP_008142041.1| - 0.0029 17.4 0.0 0.02 14.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|518652521|ref|YP_008142041.1| - 0.01 16.0 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.1 gi|518652521|ref|YP_008142041.1| - 0.011 15.7 6.1 0.026 14.5 4.2 1.6 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|518652521|ref|YP_008142041.1| - 0.017 15.2 0.3 0.035 14.2 0.2 1.6 1 1 0 1 1 1 0 RNA helicase CoaE PF01121.15 gi|518652521|ref|YP_008142041.1| - 0.021 14.2 1.6 1.2 8.4 0.3 2.3 1 1 0 2 2 2 0 Dephospho-CoA kinase UPF0079 PF02367.12 gi|518652521|ref|YP_008142041.1| - 0.023 14.3 0.1 0.04 13.5 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 ABC_tran PF00005.22 gi|518652521|ref|YP_008142041.1| - 0.024 14.9 0.6 0.028 14.7 0.4 1.4 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.7 gi|518652521|ref|YP_008142041.1| - 0.026 13.6 0.2 0.043 12.9 0.1 1.5 1 1 0 1 1 1 0 Zeta toxin AAA_23 PF13476.1 gi|518652521|ref|YP_008142041.1| - 0.027 14.8 1.3 0.032 14.5 0.9 1.3 1 1 0 1 1 1 0 AAA domain ADK PF00406.17 gi|518652521|ref|YP_008142041.1| - 0.031 14.1 0.2 0.17 11.7 0.0 2.2 1 1 1 2 2 2 0 Adenylate kinase Thymidylate_kin PF02223.12 gi|518652521|ref|YP_008142041.1| - 0.056 12.8 0.4 0.6 9.4 0.1 2.2 1 1 1 2 2 2 0 Thymidylate kinase APS_kinase PF01583.15 gi|518652521|ref|YP_008142041.1| - 0.11 12.1 0.5 0.2 11.3 0.3 1.8 1 1 0 1 1 1 0 Adenylylsulphate kinase NDUF_C2 PF06374.6 gi|518652521|ref|YP_008142041.1| - 0.13 12.2 0.2 0.26 11.2 0.2 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) AAA_29 PF13555.1 gi|518652521|ref|YP_008142041.1| - 0.34 10.4 1.4 0.66 9.5 1.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TruB_N PF01509.13 gi|518652522|ref|YP_008142042.1| - 2.6e-28 99.0 0.9 3.7e-25 88.8 0.6 3.2 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.15 gi|518652522|ref|YP_008142042.1| - 1.3e-11 44.0 0.1 3.2e-11 42.8 0.0 1.6 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.7 gi|518652522|ref|YP_008142042.1| - 3.6e-05 23.6 0.0 0.00034 20.4 0.0 2.4 2 0 0 2 2 2 1 DKCLD (NUC011) domain PseudoU_synth_2 PF00849.17 gi|518652522|ref|YP_008142042.1| - 0.00089 19.1 0.0 0.0015 18.3 0.0 1.6 1 0 0 1 1 1 1 RNA pseudouridylate synthase Nop PF01798.13 gi|518652523|ref|YP_008142043.1| - 1.3e-32 112.2 0.0 1.4e-32 112.0 0.0 1.0 1 0 0 1 1 1 1 Putative snoRNA binding domain GATase_6 PF13522.1 gi|518652524|ref|YP_008142044.1| - 3.2e-24 85.3 0.0 5.7e-24 84.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|518652524|ref|YP_008142044.1| - 8e-24 83.7 0.0 1.3e-23 83.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|518652524|ref|YP_008142044.1| - 8.1e-21 74.1 0.0 7.7e-15 54.4 0.0 3.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II Pribosyltran PF00156.22 gi|518652524|ref|YP_008142044.1| - 8.5e-11 41.6 0.2 3.2e-10 39.8 0.1 1.9 1 1 1 2 2 2 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|518652524|ref|YP_008142044.1| - 4.7e-06 25.4 0.0 7.3e-06 24.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PRTase_2 PF15609.1 gi|518652524|ref|YP_008142044.1| - 0.04 13.2 0.0 0.069 12.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase LSM PF01423.17 gi|518652525|ref|YP_008142045.1| - 6.4e-20 70.4 0.8 7.5e-20 70.2 0.5 1.1 1 0 0 1 1 1 1 LSM domain PsiE PF06146.7 gi|518652526|ref|YP_008142046.1| - 0.002 18.3 7.4 0.002 18.3 5.1 1.8 2 0 0 2 2 2 1 Phosphate-starvation-inducible E DUF3974 PF13120.1 gi|518652526|ref|YP_008142046.1| - 0.023 14.5 0.9 0.023 14.5 0.6 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3974) Met_10 PF02475.11 gi|518652527|ref|YP_008142047.1| - 4e-36 124.4 0.3 7e-36 123.7 0.2 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_31 PF13847.1 gi|518652527|ref|YP_008142047.1| - 5.6e-10 39.0 0.0 3e-09 36.6 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|518652527|ref|YP_008142047.1| - 6.5e-10 38.6 0.0 1e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|518652527|ref|YP_008142047.1| - 2e-08 34.2 0.0 3.5e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652527|ref|YP_008142047.1| - 7.8e-07 29.6 0.0 1.5e-06 28.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|518652527|ref|YP_008142047.1| - 6.2e-05 22.6 0.1 0.00013 21.5 0.1 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.11 gi|518652527|ref|YP_008142047.1| - 0.00064 18.7 0.0 0.0022 16.9 0.0 1.5 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_12 PF08242.7 gi|518652527|ref|YP_008142047.1| - 0.00077 19.8 0.0 0.0015 18.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|518652527|ref|YP_008142047.1| - 0.01 15.2 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_11 PF08241.7 gi|518652527|ref|YP_008142047.1| - 0.01 16.2 0.0 0.02 15.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518652527|ref|YP_008142047.1| - 0.017 15.4 0.0 0.032 14.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.8 gi|518652527|ref|YP_008142047.1| - 0.045 12.8 0.0 0.073 12.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PRMT5 PF05185.11 gi|518652527|ref|YP_008142047.1| - 0.095 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Esterase PF00756.15 gi|518652528|ref|YP_008142048.1| - 4.7e-17 62.2 0.0 2e-16 60.1 0.0 1.7 1 1 0 1 1 1 1 Putative esterase Abhydrolase_5 PF12695.2 gi|518652528|ref|YP_008142048.1| - 0.062 13.0 0.0 0.14 11.9 0.0 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family PadR PF03551.9 gi|518652529|ref|YP_008142049.1| - 7.8e-14 51.2 0.1 1.7e-13 50.1 0.0 1.6 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family DUF4364 PF14277.1 gi|518652529|ref|YP_008142049.1| - 0.0025 17.4 0.8 0.0037 16.9 0.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_27 PF13463.1 gi|518652529|ref|YP_008142049.1| - 0.0035 17.6 0.0 0.0056 16.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|518652529|ref|YP_008142049.1| - 0.013 15.2 0.2 0.028 14.1 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|518652529|ref|YP_008142049.1| - 0.051 13.4 0.3 0.12 12.2 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix HATPase_c_3 PF13589.1 gi|518652529|ref|YP_008142049.1| - 1.4 8.5 4.6 0.45 10.1 1.1 1.6 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aminotran_3 PF00202.16 gi|518652530|ref|YP_008142050.1| - 1.4e-62 211.5 0.0 1.7e-62 211.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|518652530|ref|YP_008142050.1| - 0.00016 20.7 0.0 0.00019 20.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DUF760 PF05542.6 gi|518652530|ref|YP_008142050.1| - 0.073 13.2 0.0 0.2 11.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF760) Porphobil_deam PF01379.15 gi|518652531|ref|YP_008142051.1| - 2.8e-58 196.3 0.1 5.9e-58 195.3 0.1 1.5 2 0 0 2 2 2 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|518652531|ref|YP_008142051.1| - 0.016 15.3 0.0 0.049 13.7 0.0 1.8 1 0 0 1 1 1 0 Porphobilinogen deaminase, C-terminal domain HEM4 PF02602.10 gi|518652532|ref|YP_008142052.1| - 4.3e-24 85.0 0.0 5.3e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD KH_1 PF00013.24 gi|518652533|ref|YP_008142053.1| - 2.6e-15 55.7 5.6 3.6e-07 29.7 1.4 2.4 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|518652533|ref|YP_008142053.1| - 8.2e-07 28.5 7.6 0.0019 17.7 0.8 2.9 2 1 1 3 3 3 2 KH domain Nab2 PF11517.3 gi|518652533|ref|YP_008142053.1| - 0.0027 17.7 0.1 0.0062 16.5 0.0 1.6 2 0 0 2 2 2 1 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) KH_4 PF13083.1 gi|518652533|ref|YP_008142053.1| - 0.066 12.8 4.7 1.7 8.3 0.2 3.0 2 2 1 3 3 3 0 KH domain KH_2 PF07650.12 gi|518652533|ref|YP_008142053.1| - 0.11 12.1 9.9 1.9 8.1 2.3 3.2 1 1 0 2 2 2 0 KH domain NfeD PF01957.13 gi|518652533|ref|YP_008142053.1| - 0.19 11.8 0.9 18 5.4 0.1 2.4 2 1 0 2 2 2 0 NfeD-like C-terminal, partner-binding RIO1 PF01163.17 gi|518652534|ref|YP_008142054.1| - 3.2e-59 199.4 0.0 4.4e-59 199.0 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.9 gi|518652534|ref|YP_008142054.1| - 0.0074 15.3 0.0 0.49 9.4 0.0 2.2 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.18 gi|518652534|ref|YP_008142054.1| - 0.011 15.4 0.0 0.24 11.0 0.0 2.1 1 1 0 2 2 2 0 Phosphotransferase enzyme family eIF-1a PF01176.14 gi|518652535|ref|YP_008142055.1| - 2.1e-28 97.5 0.3 4.4e-28 96.4 0.2 1.5 1 1 1 2 2 2 1 Translation initiation factor 1A / IF-1 AA_permease_2 PF13520.1 gi|518652536|ref|YP_008142056.1| - 1.2e-41 142.7 55.9 1.2e-41 142.7 38.8 2.1 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518652536|ref|YP_008142056.1| - 8.5e-33 113.4 51.3 8.5e-33 113.4 35.6 2.1 1 1 1 2 2 2 2 Amino acid permease KH_5 PF13184.1 gi|518652537|ref|YP_008142057.1| - 2.1e-06 27.4 1.1 3.5e-05 23.5 0.0 2.2 2 0 0 2 2 2 2 NusA-like KH domain RNA_pol_Rpb1_5 PF04998.12 gi|518652538|ref|YP_008142058.1| - 7.5e-55 186.1 1.1 8.8e-55 185.9 0.7 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.7 gi|518652539|ref|YP_008142059.1| - 1.5e-89 300.5 0.6 1.2e-51 175.9 0.0 2.1 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|518652539|ref|YP_008142059.1| - 9.1e-58 194.8 0.0 1.4e-57 194.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.13 gi|518652539|ref|YP_008142059.1| - 3.1e-31 108.2 0.0 5.4e-31 107.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.12 gi|518652539|ref|YP_008142059.1| - 2.1e-26 92.8 0.4 4.5e-26 91.7 0.1 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.12 gi|518652539|ref|YP_008142059.1| - 5.9e-23 80.6 0.0 1.3e-22 79.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 Auto_anti-p27 PF06677.7 gi|518652539|ref|YP_008142059.1| - 0.57 9.9 4.0 0.18 11.5 0.1 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) RNA_pol_Rpb2_6 PF00562.23 gi|518652540|ref|YP_008142060.1| - 3.6e-124 414.4 0.2 8e-124 413.2 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.10 gi|518652540|ref|YP_008142060.1| - 9.7e-36 122.6 0.0 3.5e-34 117.5 0.0 2.3 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.11 gi|518652540|ref|YP_008142060.1| - 1.1e-25 89.0 0.1 2.5e-25 88.0 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.9 gi|518652540|ref|YP_008142060.1| - 1.3e-25 89.9 0.3 2.7e-25 88.9 0.2 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.15 gi|518652540|ref|YP_008142060.1| - 1.4e-23 82.9 0.1 6.7e-23 80.7 0.0 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.8 gi|518652540|ref|YP_008142060.1| - 3e-21 74.9 0.5 8.2e-21 73.5 0.3 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|518652540|ref|YP_008142060.1| - 8.7e-13 48.0 0.1 2.2e-12 46.7 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Ogr_Delta PF04606.7 gi|518652540|ref|YP_008142060.1| - 0.0048 16.5 2.6 2.7 7.6 0.1 3.4 3 0 0 3 3 3 1 Ogr/Delta-like zinc finger OrfB_Zn_ribbon PF07282.6 gi|518652540|ref|YP_008142060.1| - 0.035 13.7 3.0 4.4 7.0 0.0 2.6 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|518652540|ref|YP_008142060.1| - 0.039 13.7 3.1 1.9 8.3 0.1 2.8 2 1 1 3 3 3 0 Transposase zinc-ribbon domain gpD PF02925.11 gi|518652540|ref|YP_008142060.1| - 0.097 12.4 0.1 0.33 10.7 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage scaffolding protein D TF_Zn_Ribbon PF08271.7 gi|518652540|ref|YP_008142060.1| - 0.13 11.6 5.8 0.15 11.3 0.9 2.7 2 0 0 2 2 2 0 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|518652540|ref|YP_008142060.1| - 0.18 11.0 2.7 11 5.3 0.2 2.9 2 0 0 2 2 2 0 zinc-ribbon domain RNA_pol_Rpb5_C PF01191.14 gi|518652541|ref|YP_008142061.1| - 3.4e-26 90.6 0.7 3.9e-26 90.4 0.5 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain IF-2B PF01008.12 gi|518652542|ref|YP_008142062.1| - 2.2e-72 243.4 0.0 4.2e-72 242.5 0.0 1.4 1 1 0 1 1 1 1 Initiation factor 2 subunit family tRNA-synt_1b PF00579.20 gi|518652543|ref|YP_008142063.1| - 2.7e-39 135.0 0.1 9.1e-24 84.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) Sugar_tr PF00083.19 gi|518652544|ref|YP_008142064.1| - 2.8e-45 154.7 38.4 3.4e-45 154.4 26.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518652544|ref|YP_008142064.1| - 5.2e-25 87.9 52.6 4.3e-23 81.6 28.4 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily DS PF01916.12 gi|518652545|ref|YP_008142065.1| - 3.9e-84 282.3 0.1 4.5e-84 282.0 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase PrmA PF06325.8 gi|518652546|ref|YP_008142066.1| - 1.1e-12 47.7 0.0 1.5e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|518652546|ref|YP_008142066.1| - 5.9e-11 42.4 0.0 7e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518652546|ref|YP_008142066.1| - 1.9e-09 37.2 0.0 2.4e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518652546|ref|YP_008142066.1| - 2e-09 37.0 0.0 2.6e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|518652546|ref|YP_008142066.1| - 9.7e-09 35.8 0.0 1.5e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652546|ref|YP_008142066.1| - 4.7e-07 29.6 0.0 6.6e-07 29.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|518652546|ref|YP_008142066.1| - 5e-07 29.4 0.1 7.7e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|518652546|ref|YP_008142066.1| - 0.0001 22.6 0.0 0.00015 22.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518652546|ref|YP_008142066.1| - 0.00012 22.4 0.0 0.00019 21.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|518652546|ref|YP_008142066.1| - 0.00032 21.1 0.0 0.00058 20.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|518652546|ref|YP_008142066.1| - 0.0095 15.3 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 INTS5_C PF14838.1 gi|518652547|ref|YP_008142067.1| - 0.11 10.6 0.0 0.11 10.6 0.0 1.0 1 0 0 1 1 1 0 Integrator complex subunit 5 C-terminus SRP54_N PF02881.14 gi|518652547|ref|YP_008142067.1| - 0.16 12.0 0.5 0.35 11.0 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain UbiA PF01040.13 gi|518652548|ref|YP_008142068.1| - 5.8e-30 104.3 26.2 7.9e-30 103.9 18.1 1.2 1 1 0 1 1 1 1 UbiA prenyltransferase family DUF4064 PF13273.1 gi|518652548|ref|YP_008142068.1| - 0.0076 16.3 2.0 0.0076 16.3 1.4 3.5 1 1 0 2 2 2 1 Protein of unknown function (DUF4064) DUF4231 PF14015.1 gi|518652548|ref|YP_008142068.1| - 0.068 13.1 0.3 0.068 13.1 0.2 3.7 3 2 1 4 4 4 0 Protein of unknown function (DUF4231) ECR1_N PF14382.1 gi|518652549|ref|YP_008142069.1| - 1.9e-07 30.2 0.0 3.8e-07 29.2 0.0 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region TF_Zn_Ribbon PF08271.7 gi|518652549|ref|YP_008142069.1| - 0.014 14.7 0.5 0.029 13.6 0.4 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding FYVE PF01363.16 gi|518652549|ref|YP_008142069.1| - 0.017 15.0 0.6 0.027 14.3 0.4 1.2 1 0 0 1 1 1 0 FYVE zinc finger A2L_zn_ribbon PF08792.5 gi|518652549|ref|YP_008142069.1| - 0.042 13.3 1.6 0.1 12.1 1.1 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain Cript PF10235.4 gi|518652549|ref|YP_008142069.1| - 0.052 13.9 0.0 0.084 13.2 0.0 1.3 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT PHF5 PF03660.9 gi|518652549|ref|YP_008142069.1| - 0.068 13.2 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 PHF5-like protein Trm112p PF03966.11 gi|518652549|ref|YP_008142069.1| - 0.11 12.8 0.4 0.19 12.0 0.3 1.6 1 1 0 1 1 1 0 Trm112p-like protein EXOSC1 PF10447.4 gi|518652549|ref|YP_008142069.1| - 0.14 12.1 3.5 8.1 6.4 0.1 2.7 2 1 1 3 3 3 0 Exosome component EXOSC1/CSL4 zf-dskA_traR PF01258.12 gi|518652549|ref|YP_008142069.1| - 0.16 11.7 1.1 0.22 11.3 0.1 1.7 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger RRN7 PF11781.3 gi|518652549|ref|YP_008142069.1| - 0.19 11.2 2.5 0.41 10.1 1.7 1.5 1 1 0 1 1 1 0 RNA polymerase I-specific transcription initiation factor Rrn7 DUF4349 PF14257.1 gi|518652550|ref|YP_008142070.1| - 0.0044 16.2 0.4 0.005 16.1 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4349) Transposase_22 PF02994.9 gi|518652550|ref|YP_008142070.1| - 0.022 13.2 0.3 0.022 13.2 0.2 1.1 1 0 0 1 1 1 0 L1 transposable element NblA PF04485.7 gi|518652550|ref|YP_008142070.1| - 0.067 13.0 0.4 0.092 12.6 0.2 1.2 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA TMF_DNA_bd PF12329.3 gi|518652550|ref|YP_008142070.1| - 0.1 12.3 0.3 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF2383 PF09537.5 gi|518652550|ref|YP_008142070.1| - 0.11 12.7 0.1 0.13 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) SlyX PF04102.7 gi|518652550|ref|YP_008142070.1| - 0.13 12.6 0.2 0.14 12.5 0.2 1.1 1 0 0 1 1 1 0 SlyX LSM PF01423.17 gi|518652551|ref|YP_008142071.1| - 7.2e-19 67.1 2.3 7.9e-19 66.9 1.6 1.0 1 0 0 1 1 1 1 LSM domain PUA PF01472.15 gi|518652552|ref|YP_008142072.1| - 4.3e-05 23.1 0.0 9.8e-05 22.0 0.0 1.6 1 0 0 1 1 1 1 PUA domain TGT PF01702.13 gi|518652552|ref|YP_008142072.1| - 0.012 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase ATP-sulfurylase PF01747.12 gi|518652553|ref|YP_008142073.1| - 2.4e-80 268.9 0.0 3.5e-80 268.3 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.1 gi|518652553|ref|YP_008142073.1| - 3.1e-37 127.4 0.0 5e-37 126.7 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain PAPS_reduct PF01507.14 gi|518652554|ref|YP_008142074.1| - 2.8e-38 131.4 0.1 3.4e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ComA PF02679.10 gi|518652555|ref|YP_008142075.1| - 1.5e-55 187.9 0.1 1.7e-55 187.6 0.0 1.1 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) HTH_36 PF13730.1 gi|518652555|ref|YP_008142075.1| - 0.00027 21.0 0.0 0.00055 19.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652555|ref|YP_008142075.1| - 0.00043 19.5 0.1 0.0014 17.9 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|518652555|ref|YP_008142075.1| - 0.001 18.7 0.1 0.0067 16.1 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|518652555|ref|YP_008142075.1| - 0.0061 16.1 0.0 0.013 15.1 0.0 1.5 1 0 0 1 1 1 1 MarR family GntR PF00392.16 gi|518652555|ref|YP_008142075.1| - 0.024 14.0 0.0 0.062 12.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family MarR PF01047.17 gi|518652555|ref|YP_008142075.1| - 0.048 13.3 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_43 PF09904.4 gi|518652555|ref|YP_008142075.1| - 0.06 13.1 0.1 0.39 10.5 0.0 2.4 3 1 0 3 3 3 0 Winged helix-turn helix HTH_Crp_2 PF13545.1 gi|518652555|ref|YP_008142075.1| - 0.065 13.0 0.0 0.27 11.0 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_CodY PF08222.6 gi|518652555|ref|YP_008142075.1| - 0.078 12.3 0.0 0.2 11.0 0.0 1.7 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_5 PF01022.15 gi|518652555|ref|YP_008142075.1| - 0.079 12.6 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.5 gi|518652555|ref|YP_008142075.1| - 0.11 12.0 0.0 0.28 10.8 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain OppC_N PF12911.2 gi|518652557|ref|YP_008142077.1| - 0.1 11.9 2.7 0.23 10.8 1.9 1.5 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Sigma_reg_N PF13800.1 gi|518652557|ref|YP_008142077.1| - 0.82 9.7 7.6 0.3 11.1 0.6 3.1 3 0 0 3 3 3 0 Sigma factor regulator N-terminal TPP_enzyme_C PF02775.16 gi|518652558|ref|YP_008142078.1| - 4e-25 88.1 0.1 9.7e-25 86.9 0.0 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|518652558|ref|YP_008142078.1| - 4.7e-16 58.9 0.1 8.9e-16 58.0 0.1 1.5 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|518652558|ref|YP_008142078.1| - 8.8e-06 25.1 15.3 0.0046 16.5 4.4 3.4 2 1 0 2 2 2 2 4Fe-4S binding domain TPP_enzyme_N PF02776.13 gi|518652558|ref|YP_008142078.1| - 9.7e-05 21.9 0.5 0.018 14.5 0.1 2.8 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_6 PF12837.2 gi|518652558|ref|YP_008142078.1| - 0.00017 21.3 19.5 0.002 17.9 2.4 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Transketolase_C PF02780.15 gi|518652558|ref|YP_008142078.1| - 0.00052 19.9 0.0 0.0015 18.4 0.0 1.8 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4_7 PF12838.2 gi|518652558|ref|YP_008142078.1| - 0.00055 20.2 9.9 0.0066 16.8 7.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518652558|ref|YP_008142078.1| - 0.0024 17.6 11.4 0.0071 16.1 8.0 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain DXP_synthase_N PF13292.1 gi|518652558|ref|YP_008142078.1| - 0.0026 16.7 1.1 0.0054 15.6 0.2 1.8 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Fer4_2 PF12797.2 gi|518652558|ref|YP_008142078.1| - 0.0046 16.7 12.2 0.13 12.2 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518652558|ref|YP_008142078.1| - 0.16 11.8 8.8 0.33 10.8 6.1 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518652558|ref|YP_008142078.1| - 0.36 11.1 11.0 1.1 9.6 7.6 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|518652558|ref|YP_008142078.1| - 0.84 10.4 9.9 5.5 7.8 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|518652558|ref|YP_008142078.1| - 4.3 7.9 10.1 8.9 6.9 0.4 3.0 2 1 1 3 3 3 0 4Fe-4S single cluster domain POR PF01558.13 gi|518652559|ref|YP_008142079.1| - 3.7e-33 114.8 0.1 4.4e-33 114.6 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Amidohydro_1 PF01979.15 gi|518652560|ref|YP_008142080.1| - 5.7e-41 141.2 0.0 6.9e-41 140.9 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|518652560|ref|YP_008142080.1| - 1.3e-12 47.3 0.0 1.3e-12 47.3 0.0 2.4 3 0 0 3 3 3 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|518652560|ref|YP_008142080.1| - 1.3e-11 45.0 0.0 2.9e-10 40.6 0.0 2.3 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|518652560|ref|YP_008142080.1| - 5.2e-08 32.5 0.1 5.1e-05 22.6 0.0 2.9 2 1 1 3 3 3 2 Amidohydrolase family eIF-5a PF01287.15 gi|518652562|ref|YP_008142082.1| - 5.9e-10 38.9 0.1 1.2e-09 38.0 0.0 1.5 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|518652562|ref|YP_008142082.1| - 0.00034 20.4 0.0 0.00076 19.2 0.0 1.6 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Macscav_rec PF03523.8 gi|518652562|ref|YP_008142082.1| - 0.051 13.3 0.2 0.084 12.6 0.1 1.3 1 0 0 1 1 1 0 Macrophage scavenger receptor SIS PF01380.17 gi|518652562|ref|YP_008142082.1| - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 SIS domain Arginase PF00491.16 gi|518652563|ref|YP_008142083.1| - 7.3e-74 248.5 0.0 8.3e-74 248.3 0.0 1.0 1 0 0 1 1 1 1 Arginase family Ribosomal_L16 PF00252.13 gi|518652564|ref|YP_008142084.1| - 2.4e-33 114.7 0.8 2.8e-33 114.5 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF796 PF05638.7 gi|518652564|ref|YP_008142084.1| - 0.12 12.3 0.1 0.26 11.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF796) AA_permease_2 PF13520.1 gi|518652565|ref|YP_008142085.1| - 2.1e-26 92.4 66.0 2.7e-26 92.1 45.4 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|518652565|ref|YP_008142085.1| - 3.5e-20 71.8 59.4 4.5e-20 71.4 41.2 1.1 1 0 0 1 1 1 1 Amino acid permease OrfB_Zn_ribbon PF07282.6 gi|518652566|ref|YP_008142086.1| - 1.5e-05 24.5 0.2 2.4e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|518652566|ref|YP_008142086.1| - 0.0063 15.9 4.3 0.3 10.6 0.2 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|518652566|ref|YP_008142086.1| - 0.0078 15.8 0.9 0.14 11.8 0.1 2.2 2 0 0 2 2 2 1 Nudix N-terminal zf-ribbon_3 PF13248.1 gi|518652566|ref|YP_008142086.1| - 0.041 13.0 4.6 0.2 10.8 3.3 1.9 1 1 1 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|518652566|ref|YP_008142086.1| - 0.047 13.0 2.1 0.11 11.8 1.4 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|518652566|ref|YP_008142086.1| - 0.074 12.8 0.6 0.12 12.2 0.4 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain tRNA-synt_2c PF01411.14 gi|518652567|ref|YP_008142087.1| - 0.00025 19.5 0.1 0.00038 18.8 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) PseudoU_synth_1 PF01416.15 gi|518652568|ref|YP_008142088.1| - 1.7e-19 70.2 0.7 3e-12 46.8 0.2 2.7 2 1 0 2 2 2 2 tRNA pseudouridine synthase RHH_1 PF01402.16 gi|518652569|ref|YP_008142089.1| - 2e-14 52.7 1.1 4.8e-09 35.7 0.4 2.1 2 0 0 2 2 2 2 Ribbon-helix-helix protein, copG family YtxC PF08812.6 gi|518652569|ref|YP_008142089.1| - 0.0047 16.4 1.8 0.0086 15.5 1.2 1.4 1 1 0 1 1 1 1 YtxC-like family HTH_15 PF12324.3 gi|518652569|ref|YP_008142089.1| - 0.094 12.3 0.0 0.27 10.9 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase EntA_Immun PF08951.5 gi|518652569|ref|YP_008142089.1| - 0.32 11.1 4.7 0.47 10.6 3.0 1.6 1 1 0 1 1 1 0 Enterocin A Immunity B5 PF03484.10 gi|518652570|ref|YP_008142090.1| - 1e-14 54.0 0.0 9.7e-14 50.9 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.12 gi|518652570|ref|YP_008142090.1| - 4.4e-12 45.8 0.0 7.9e-12 44.9 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain AA_permease_2 PF13520.1 gi|518652571|ref|YP_008142091.1| - 2.5e-10 39.4 76.8 2.5e-10 39.4 53.2 2.2 1 1 2 3 3 3 1 Amino acid permease AA_permease PF00324.16 gi|518652571|ref|YP_008142091.1| - 3.3e-09 35.6 48.5 3.3e-09 35.6 33.6 2.2 2 0 0 2 2 2 1 Amino acid permease CarboxypepD_reg PF13620.1 gi|518652572|ref|YP_008142092.1| - 6.5e-14 51.7 79.9 1.1e-06 28.5 3.1 9.4 9 1 1 10 10 10 5 Carboxypeptidase regulatory-like domain STT3 PF02516.9 gi|518652572|ref|YP_008142092.1| - 6.7e-13 48.4 39.9 6.7e-13 48.4 27.7 1.9 2 0 0 2 2 2 1 Oligosaccharyl transferase STT3 subunit phage_tail_N PF08400.5 gi|518652572|ref|YP_008142092.1| - 0.0033 17.1 0.3 0.0033 17.1 0.2 6.3 5 1 2 7 7 7 1 Prophage tail fibre N-terminal DUF460 PF04312.8 gi|518652574|ref|YP_008142094.1| - 0.0066 15.9 0.2 0.013 15.0 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF460) Sda PF08970.5 gi|518652574|ref|YP_008142094.1| - 0.018 14.5 0.0 6 6.4 0.0 3.0 3 0 0 3 3 3 0 Sporulation inhibitor A MutL PF13941.1 gi|518652575|ref|YP_008142095.1| - 0.039 12.2 0.1 0.052 11.8 0.0 1.1 1 0 0 1 1 1 0 MutL protein Cas_Cas6 PF01881.11 gi|518652577|ref|YP_008142097.1| - 5.8e-28 98.0 6.6 1e-27 97.2 4.5 1.4 1 0 0 1 1 1 1 CRISPR associated protein Cas6 N_NLPC_P60 PF12912.2 gi|518652577|ref|YP_008142097.1| - 0.00059 19.9 1.0 0.00093 19.3 0.7 1.3 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term TRAPP PF04051.11 gi|518652577|ref|YP_008142097.1| - 0.059 12.8 0.1 0.35 10.3 0.0 2.0 2 1 0 2 2 2 0 Transport protein particle (TRAPP) component Cas_TM1802 PF09484.5 gi|518652578|ref|YP_008142098.1| - 5.1e-70 236.6 57.4 5.8e-70 236.4 39.8 1.0 1 0 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) zf-H2C2 PF09337.5 gi|518652578|ref|YP_008142098.1| - 0.098 12.0 1.4 0.37 10.2 0.0 2.4 2 0 0 2 2 2 0 His(2)-Cys(2) zinc finger DUF1623 PF07785.6 gi|518652578|ref|YP_008142098.1| - 0.9 9.5 9.5 0.83 9.6 0.3 4.2 3 2 1 5 5 5 0 Protein of unknown function (DUF1623) DUF694 PF05107.7 gi|518652579|ref|YP_008142099.1| - 9.7e-61 205.3 0.5 1.3e-60 204.9 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF694) Ter PF05472.6 gi|518652579|ref|YP_008142099.1| - 0.13 11.4 0.2 0.3 10.1 0.1 1.5 1 1 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) Cas_Cas5d PF09704.5 gi|518652580|ref|YP_008142100.1| - 1.8e-05 24.4 0.0 2.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DEAD PF00270.24 gi|518652581|ref|YP_008142101.1| - 1.5e-08 34.3 0.0 3.5e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518652581|ref|YP_008142101.1| - 0.00081 19.2 0.1 0.002 17.9 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518652581|ref|YP_008142101.1| - 0.0074 16.1 1.4 0.0074 16.1 1.0 2.9 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit HD PF01966.17 gi|518652581|ref|YP_008142101.1| - 0.0083 16.1 0.0 0.054 13.4 0.0 2.3 2 0 0 2 2 2 1 HD domain AAA_22 PF13401.1 gi|518652581|ref|YP_008142101.1| - 0.044 13.9 0.0 3.9 7.6 0.0 2.8 2 0 0 2 2 2 0 AAA domain Cas_Cas4 PF01930.12 gi|518652582|ref|YP_008142102.1| - 1.6e-30 106.1 0.4 2.5e-30 105.5 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF83 DUF91 PF01939.11 gi|518652582|ref|YP_008142102.1| - 0.00018 20.7 0.1 0.00023 20.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF91 PDDEXK_3 PF13366.1 gi|518652582|ref|YP_008142102.1| - 0.025 14.6 0.1 0.039 13.9 0.1 1.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Dna2 PF08696.6 gi|518652582|ref|YP_008142102.1| - 0.026 13.8 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 DNA replication factor Dna2 DUF488 PF04343.8 gi|518652583|ref|YP_008142103.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 Cas_Cas1 PF01867.11 gi|518652584|ref|YP_008142104.1| - 4.2e-84 281.9 4.7 4.9e-84 281.7 3.3 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 TP6A_N PF04406.9 gi|518652584|ref|YP_008142104.1| - 0.058 13.0 0.2 0.91 9.2 0.0 2.4 1 1 1 2 2 2 0 Type IIB DNA topoisomerase CRISPR_Cas2 PF09827.4 gi|518652585|ref|YP_008142105.1| - 2.1e-18 66.2 1.7 2.5e-18 65.9 1.2 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 AntA PF08346.7 gi|518652585|ref|YP_008142105.1| - 0.025 14.7 0.2 0.031 14.4 0.1 1.3 1 1 0 1 1 1 0 AntA/AntB antirepressor DDE_Tnp_1 PF01609.16 gi|518652586|ref|YP_008142106.1| - 6.4e-05 22.5 0.1 7e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652586|ref|YP_008142106.1| - 9.9e-05 22.1 0.0 9.9e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF488 PF04343.8 gi|518652588|ref|YP_008142108.1| - 2.3e-29 102.2 0.1 2.6e-29 102.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF488 DUF2179 PF10035.4 gi|518652588|ref|YP_008142108.1| - 0.078 12.6 0.2 11 5.6 0.0 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) Peptidase_M48 PF01435.13 gi|518652589|ref|YP_008142109.1| - 3.1e-24 85.7 1.7 3.3e-24 85.6 0.1 1.7 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|518652589|ref|YP_008142109.1| - 2.6e-05 23.3 13.4 8.3e-05 21.6 6.4 2.8 1 1 0 2 2 2 1 BlaR1 peptidase M56 DUF2201_N PF13203.1 gi|518652589|ref|YP_008142109.1| - 0.0083 15.3 0.1 0.013 14.7 0.1 1.2 1 0 0 1 1 1 1 Putative metallopeptidase domain Nodulin_late PF07127.6 gi|518652589|ref|YP_008142109.1| - 0.35 11.0 0.2 0.35 11.0 0.1 4.5 5 1 0 5 5 5 0 Late nodulin protein AgrB PF04647.10 gi|518652589|ref|YP_008142109.1| - 3.4 6.6 26.1 0.093 11.7 2.0 3.3 3 0 0 3 3 3 0 Accessory gene regulator B EMG1 PF03587.9 gi|518652590|ref|YP_008142110.1| - 3.7e-44 150.4 0.0 4.1e-44 150.2 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Aldo_ket_red PF00248.16 gi|518652591|ref|YP_008142111.1| - 9.6e-70 234.5 0.2 1.2e-69 234.3 0.1 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Ribosomal_S13_N PF08069.7 gi|518652592|ref|YP_008142112.1| - 1.6e-22 79.0 0.3 2.9e-22 78.2 0.2 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|518652592|ref|YP_008142112.1| - 3.5e-15 55.5 0.7 5.5e-15 54.8 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 Ly49 PF08391.5 gi|518652592|ref|YP_008142112.1| - 0.087 12.9 0.2 4.6 7.3 0.0 2.1 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region DHH PF01368.15 gi|518652593|ref|YP_008142113.1| - 8.1e-15 54.7 0.3 1.4e-14 54.0 0.2 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|518652593|ref|YP_008142113.1| - 1.6e-13 50.1 0.8 1.6e-13 50.1 0.6 1.7 2 0 0 2 2 2 1 DHHA1 domain DUF488 PF04343.8 gi|518652595|ref|YP_008142115.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 DUF2080 PF09853.4 gi|518652596|ref|YP_008142116.1| - 4.7e-14 51.8 0.3 5e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) DUF3463 PF11946.3 gi|518652597|ref|YP_008142117.1| - 6e-21 74.4 1.4 1e-20 73.7 1.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) Radical_SAM PF04055.16 gi|518652597|ref|YP_008142117.1| - 4.8e-17 62.6 0.0 7.7e-17 61.9 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|518652597|ref|YP_008142117.1| - 5.3e-09 36.3 0.1 3.5e-08 33.6 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|518652597|ref|YP_008142117.1| - 7e-07 29.2 0.0 1.5e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|518652597|ref|YP_008142117.1| - 0.037 14.3 1.4 0.11 12.8 0.9 1.8 1 0 0 1 1 1 0 Iron-sulfur cluster-binding domain HsdM_N PF12161.3 gi|518652598|ref|YP_008142118.1| - 1.2e-13 51.7 1.5 1.4e-13 51.3 1.1 1.1 1 0 0 1 1 1 1 HsdM N-terminal domain EnY2 PF10163.4 gi|518652598|ref|YP_008142118.1| - 0.00011 22.0 1.8 0.0034 17.2 0.0 2.2 2 0 0 2 2 2 1 Transcription factor e(y)2 Nnf1 PF03980.9 gi|518652598|ref|YP_008142118.1| - 0.00074 19.4 1.9 0.018 15.0 1.3 2.2 1 1 0 1 1 1 1 Nnf1 Borrelia_lipo_1 PF05714.6 gi|518652598|ref|YP_008142118.1| - 0.01 14.9 2.5 0.015 14.3 1.4 1.5 1 1 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein YkuI_C PF10388.4 gi|518652598|ref|YP_008142118.1| - 0.012 15.2 0.1 0.019 14.6 0.1 1.3 1 0 0 1 1 1 0 EAL-domain associated signalling protein domain CHDCT2 PF08074.6 gi|518652598|ref|YP_008142118.1| - 0.073 12.7 0.1 0.091 12.4 0.0 1.2 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Kri1 PF05178.7 gi|518652598|ref|YP_008142118.1| - 0.17 12.2 2.8 0.27 11.5 0.1 2.0 2 0 0 2 2 2 0 KRI1-like family Cation_efflux PF01545.16 gi|518652599|ref|YP_008142119.1| - 1.2e-34 119.6 12.0 1.4e-34 119.4 8.3 1.0 1 0 0 1 1 1 1 Cation efflux family YlaC PF10777.4 gi|518652599|ref|YP_008142119.1| - 0.022 14.2 1.1 0.049 13.1 0.8 1.7 1 0 0 1 1 1 0 Inner membrane protein YlaC TPK_catalytic PF04263.11 gi|518652599|ref|YP_008142119.1| - 0.11 12.0 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain DUF4554 PF15091.1 gi|518652600|ref|YP_008142120.1| - 0.11 11.1 2.2 0.14 10.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) DUF1212 PF06738.7 gi|518652600|ref|YP_008142120.1| - 1.2 8.5 15.0 0.086 12.2 6.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1212) DUF2407_C PF13373.1 gi|518652600|ref|YP_008142120.1| - 3.7 7.4 9.5 7.1 6.5 0.0 2.4 3 0 0 3 3 3 0 DUF2407 C-terminal domain MULE PF10551.4 gi|518652601|ref|YP_008142121.1| - 4.9e-08 33.0 0.0 1.5e-06 28.2 0.0 2.8 2 1 0 2 2 2 1 MULE transposase domain Transposase_mut PF00872.13 gi|518652601|ref|YP_008142121.1| - 8.6e-05 21.2 0.0 0.053 12.0 0.0 2.3 2 0 0 2 2 2 2 Transposase, Mutator family B5 PF03484.10 gi|518652602|ref|YP_008142122.1| - 0.017 14.9 0.2 0.028 14.2 0.1 1.7 1 1 0 1 1 1 0 tRNA synthetase B5 domain Imm25 PF15571.1 gi|518652602|ref|YP_008142122.1| - 0.078 13.0 2.1 0.1 12.7 1.5 1.2 1 0 0 1 1 1 0 Immunity protein 25 DDE_Tnp_1 PF01609.16 gi|518652604|ref|YP_008142124.1| - 5.2e-20 71.9 0.1 7.4e-20 71.4 0.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652604|ref|YP_008142124.1| - 2.6e-05 24.0 1.3 0.00015 21.5 0.1 2.1 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_7 PF13843.1 gi|518652604|ref|YP_008142124.1| - 0.0045 16.1 0.0 0.0069 15.4 0.0 1.2 1 0 0 1 1 1 1 Transposase IS4 HTH_26 PF13443.1 gi|518652604|ref|YP_008142124.1| - 0.0046 17.1 0.3 0.015 15.5 0.1 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_10 PF04967.7 gi|518652604|ref|YP_008142124.1| - 0.0059 16.1 0.2 3.5 7.2 0.0 2.7 2 0 0 2 2 2 2 HTH DNA binding domain MFS_1 PF07690.11 gi|518652605|ref|YP_008142125.1| - 5.9e-12 44.9 34.9 5.9e-12 44.9 24.2 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily PUCC PF03209.10 gi|518652605|ref|YP_008142125.1| - 0.94 8.1 17.3 2.5 6.7 11.3 2.2 1 1 1 2 2 2 0 PUCC protein Phage_integrase PF00589.17 gi|518652606|ref|YP_008142126.1| - 2.5e-20 72.8 0.0 4.7e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family DZR PF12773.2 gi|518652606|ref|YP_008142126.1| - 0.0068 16.2 0.7 0.013 15.3 0.5 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652606|ref|YP_008142126.1| - 0.008 15.3 3.2 0.013 14.6 2.2 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-tcix PF14952.1 gi|518652606|ref|YP_008142126.1| - 0.047 13.0 0.3 0.094 12.0 0.2 1.4 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding zinc_ribbon_2 PF13240.1 gi|518652606|ref|YP_008142126.1| - 0.11 11.9 2.4 0.2 11.1 1.7 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Fer4_6 PF12837.2 gi|518652607|ref|YP_008142127.1| - 2.8e-13 49.0 10.9 4.6e-08 32.5 2.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|518652607|ref|YP_008142127.1| - 1.2e-11 44.8 4.1 2.1e-11 43.9 2.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|518652607|ref|YP_008142127.1| - 2.5e-10 39.5 11.9 1.1e-07 31.1 2.7 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|518652607|ref|YP_008142127.1| - 1e-08 34.8 4.3 2.3e-08 33.7 3.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|518652607|ref|YP_008142127.1| - 1.5e-07 31.8 3.3 0.013 16.0 0.0 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|518652607|ref|YP_008142127.1| - 3.7e-07 30.3 8.1 1.1e-06 28.7 4.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|518652607|ref|YP_008142127.1| - 3.1e-06 27.8 7.2 0.00042 21.0 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|518652607|ref|YP_008142127.1| - 1.2e-05 25.5 7.0 5e-05 23.5 4.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|518652607|ref|YP_008142127.1| - 2.6e-05 23.9 7.7 0.00092 19.0 1.2 2.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|518652607|ref|YP_008142127.1| - 4.9e-05 23.0 12.8 0.00017 21.3 2.7 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|518652607|ref|YP_008142127.1| - 6.7e-05 22.8 7.8 0.00029 20.8 4.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|518652607|ref|YP_008142127.1| - 9.6e-05 22.6 13.0 0.015 15.8 4.1 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|518652607|ref|YP_008142127.1| - 0.00024 21.4 7.5 0.13 12.6 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|518652607|ref|YP_008142127.1| - 0.00057 19.7 4.7 0.11 12.3 3.2 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|518652607|ref|YP_008142127.1| - 0.0009 19.3 14.0 0.085 13.2 0.4 2.4 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_19 PF06902.6 gi|518652607|ref|YP_008142127.1| - 0.12 12.2 1.9 7.5 6.4 0.4 2.3 2 0 0 2 2 2 0 Divergent 4Fe-4S mono-cluster Fer4_18 PF13746.1 gi|518652607|ref|YP_008142127.1| - 0.31 11.4 10.1 1.8 9.0 5.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain MCM PF00493.18 gi|518652608|ref|YP_008142128.1| - 1.5e-127 424.9 0.0 2.1e-127 424.5 0.0 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 gi|518652608|ref|YP_008142128.1| - 1.5e-11 44.8 2.9 1.2e-10 41.9 0.2 3.2 2 1 1 3 3 3 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|518652608|ref|YP_008142128.1| - 1.2e-09 37.6 0.0 2.3e-06 26.9 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|518652608|ref|YP_008142128.1| - 2.8e-05 23.8 0.0 8.2e-05 22.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.21 gi|518652608|ref|YP_008142128.1| - 0.0018 17.7 0.0 0.0054 16.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_3 PF07726.6 gi|518652608|ref|YP_008142128.1| - 0.012 15.2 0.1 0.058 13.0 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Cys_rich_CPCC PF14206.1 gi|518652608|ref|YP_008142128.1| - 0.11 12.0 0.2 0.21 11.1 0.1 1.5 1 0 0 1 1 1 0 Cysteine-rich CPCC DUF1610 PF07754.6 gi|518652608|ref|YP_008142128.1| - 0.15 12.1 0.1 0.15 12.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Zn-ribbon_8 PF09723.5 gi|518652608|ref|YP_008142128.1| - 0.16 11.9 0.4 0.35 10.8 0.3 1.5 1 0 0 1 1 1 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|518652608|ref|YP_008142128.1| - 0.56 9.4 2.7 0.99 8.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF424 PF04242.8 gi|518652609|ref|YP_008142129.1| - 6.1e-27 93.5 0.5 6.7e-27 93.3 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) Ribosomal_S13 PF00416.17 gi|518652610|ref|YP_008142130.1| - 2e-29 102.1 2.2 2.5e-29 101.8 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 S4 PF01479.20 gi|518652611|ref|YP_008142131.1| - 3.7e-14 51.8 0.0 8.1e-14 50.7 0.0 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.14 gi|518652611|ref|YP_008142131.1| - 4.5e-07 30.1 3.6 5.4e-07 29.9 1.3 2.0 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain FBA_2 PF07735.12 gi|518652611|ref|YP_008142131.1| - 0.091 12.6 0.3 0.14 11.9 0.2 1.3 1 0 0 1 1 1 0 F-box associated Ribosomal_S11 PF00411.14 gi|518652612|ref|YP_008142132.1| - 2.3e-37 127.5 0.6 2.7e-37 127.2 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 RNA_pol_A_bac PF01000.21 gi|518652613|ref|YP_008142133.1| - 2.4e-20 72.7 0.0 6.6e-20 71.3 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|518652613|ref|YP_008142133.1| - 2.5e-14 52.1 0.0 3e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain TauE PF01925.14 gi|518652614|ref|YP_008142134.1| - 2.9e-42 144.8 41.5 3.3e-42 144.5 28.8 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE EMP70 PF02990.11 gi|518652614|ref|YP_008142134.1| - 0.28 9.6 4.6 0.55 8.6 3.2 1.4 1 0 0 1 1 1 0 Endomembrane protein 70 NAD_kinase PF01513.16 gi|518652616|ref|YP_008142136.1| - 6.6e-50 169.4 2.5 8.2e-50 169.1 1.8 1.2 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|518652616|ref|YP_008142136.1| - 0.0074 15.7 0.0 0.016 14.6 0.0 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Prok-JAB PF14464.1 gi|518652617|ref|YP_008142137.1| - 3.7e-12 45.7 0.0 5.1e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.10 gi|518652617|ref|YP_008142137.1| - 0.0012 18.5 0.3 0.0016 18.1 0.2 1.4 1 1 0 1 1 1 1 RadC-like JAB domain JAB PF01398.16 gi|518652617|ref|YP_008142137.1| - 0.055 13.2 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Toxin-JAB1 PF15659.1 gi|518652617|ref|YP_008142137.1| - 0.14 12.0 0.3 0.16 11.8 0.2 1.1 1 0 0 1 1 1 0 JAB-like toxin 1 eRF1_1 PF03463.10 gi|518652618|ref|YP_008142138.1| - 6.5e-20 71.0 0.6 9.9e-20 70.4 0.4 1.2 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 gi|518652618|ref|YP_008142138.1| - 1.2e-14 54.5 0.4 5.1e-13 49.2 0.3 2.8 1 1 0 1 1 1 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|518652618|ref|YP_008142138.1| - 2.2e-09 37.7 0.0 4.9e-09 36.6 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 2 Mut7-C PF01927.11 gi|518652619|ref|YP_008142139.1| - 6e-35 120.3 0.0 6.8e-35 120.2 0.0 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF35_N PF12172.3 gi|518652619|ref|YP_008142139.1| - 0.015 15.1 2.2 0.83 9.6 0.0 2.7 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc-ribbons_6 PF07191.7 gi|518652619|ref|YP_008142139.1| - 0.025 14.3 0.7 0.17 11.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbons DUF164 PF02591.10 gi|518652619|ref|YP_008142139.1| - 0.036 13.9 0.5 11 5.9 0.0 2.6 2 0 0 2 2 2 0 Putative zinc ribbon domain DUF2321 PF10083.4 gi|518652619|ref|YP_008142139.1| - 0.049 13.1 2.9 0.051 13.0 0.8 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) zinc_ribbon_2 PF13240.1 gi|518652619|ref|YP_008142139.1| - 0.075 12.5 0.5 0.075 12.5 0.4 3.1 4 0 0 4 4 4 0 zinc-ribbon domain DZR PF12773.2 gi|518652619|ref|YP_008142139.1| - 0.081 12.7 3.1 0.16 11.7 0.5 2.4 2 1 0 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652619|ref|YP_008142139.1| - 0.13 11.5 6.4 1.2 8.3 4.4 2.4 1 1 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.4 gi|518652619|ref|YP_008142139.1| - 0.36 10.5 6.3 7.3 6.3 4.4 2.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 RNA_POL_M_15KD PF02150.11 gi|518652619|ref|YP_008142139.1| - 0.4 10.3 2.6 17 5.1 0.4 2.9 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-NADH-PPase PF09297.6 gi|518652619|ref|YP_008142139.1| - 0.64 9.5 3.2 3.5 7.2 0.2 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|518652619|ref|YP_008142139.1| - 5.1 6.6 6.9 13 5.3 0.0 3.4 3 1 0 3 3 3 0 A2L zinc ribbon domain Flavoprotein PF02441.14 gi|518652620|ref|YP_008142140.1| - 1.1e-30 105.9 0.1 1.5e-30 105.5 0.1 1.2 1 0 0 1 1 1 1 Flavoprotein Semialdhyde_dh PF01118.19 gi|518652620|ref|YP_008142140.1| - 0.018 15.3 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Peptidase_S8 PF00082.17 gi|518652622|ref|YP_008142142.1| - 3e-13 49.5 2.9 3e-13 49.5 2.0 2.5 2 2 0 2 2 2 1 Subtilase family CarboxypepD_reg PF13620.1 gi|518652622|ref|YP_008142142.1| - 6.6e-05 22.8 0.6 6.6e-05 22.8 0.4 6.2 7 0 0 7 7 7 1 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|518652622|ref|YP_008142142.1| - 0.0035 17.3 0.4 0.0035 17.3 0.2 4.4 4 1 2 6 6 6 2 Domain of unknown function (DUF4480) Meth_synt_2 PF01717.13 gi|518652623|ref|YP_008142143.1| - 1.1e-50 172.4 0.0 8.2e-50 169.6 0.0 1.9 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|518652623|ref|YP_008142143.1| - 7e-06 25.5 0.2 4.3e-05 22.9 0.0 2.2 1 1 1 3 3 3 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_1 PF08267.7 gi|518652624|ref|YP_008142144.1| - 0.0012 18.2 0.1 1.1 8.4 0.0 2.8 2 1 1 3 3 3 2 Cobalamin-independent synthase, N-terminal domain Peptidase_S66 PF02016.10 gi|518652625|ref|YP_008142145.1| - 3.2e-82 275.6 0.0 3.7e-82 275.4 0.0 1.0 1 0 0 1 1 1 1 LD-carboxypeptidase M20_dimer PF07687.9 gi|518652626|ref|YP_008142146.1| - 2e-08 33.9 0.1 1.6e-07 31.0 0.0 2.2 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M20 PF01546.23 gi|518652626|ref|YP_008142146.1| - 0.011 15.2 0.1 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 ROK PF00480.15 gi|518652627|ref|YP_008142147.1| - 6.5e-50 169.4 2.0 9.9e-50 168.8 1.4 1.3 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.15 gi|518652627|ref|YP_008142147.1| - 0.034 13.4 1.4 1.6 7.9 0.4 2.1 1 1 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family NfeD PF01957.13 gi|518652628|ref|YP_008142148.1| - 3.8e-19 69.2 1.2 3.8e-19 69.2 0.9 3.1 3 0 0 3 3 3 1 NfeD-like C-terminal, partner-binding DUF4191 PF13829.1 gi|518652628|ref|YP_008142148.1| - 0.19 10.8 0.0 0.19 10.8 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) Fumarate_red_C PF02300.12 gi|518652628|ref|YP_008142148.1| - 0.31 10.8 2.6 0.24 11.2 0.4 1.9 2 0 0 2 2 2 0 Fumarate reductase subunit C Peptidase_S49_N PF08496.5 gi|518652628|ref|YP_008142148.1| - 0.5 10.1 2.9 0.54 10.0 0.0 2.5 2 1 1 3 3 3 0 Peptidase family S49 N-terminal ATP-synt_8 PF00895.15 gi|518652628|ref|YP_008142148.1| - 1.1 9.5 3.2 8.8 6.6 0.0 2.8 3 0 0 3 3 3 0 ATP synthase protein 8 ODV-E18 PF10717.4 gi|518652628|ref|YP_008142148.1| - 2.6 7.5 6.4 0.72 9.3 0.1 2.9 3 0 0 3 3 3 0 Occlusion-derived virus envelope protein ODV-E18 CorA PF01544.13 gi|518652628|ref|YP_008142148.1| - 5.7 5.8 6.2 12 4.8 4.3 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Cys_Met_Meta_PP PF01053.15 gi|518652629|ref|YP_008142149.1| - 1.1e-123 412.3 0.0 1.2e-123 412.2 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|518652629|ref|YP_008142149.1| - 1.6e-05 23.8 0.0 0.0016 17.2 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|518652629|ref|YP_008142149.1| - 0.00073 18.6 0.0 0.058 12.4 0.0 2.8 3 0 0 3 3 3 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|518652629|ref|YP_008142149.1| - 0.0035 16.5 0.0 0.02 14.0 0.0 2.1 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|518652629|ref|YP_008142149.1| - 0.0056 15.6 0.0 0.0098 14.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II tRNA-synt_2 PF00152.15 gi|518652630|ref|YP_008142150.1| - 1.3e-91 306.8 2.1 2e-91 306.2 1.4 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|518652630|ref|YP_008142150.1| - 2.8e-13 49.4 0.7 5.1e-13 48.6 0.5 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|518652630|ref|YP_008142150.1| - 0.00026 20.2 0.1 0.19 10.9 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) BOF PF04076.8 gi|518652630|ref|YP_008142150.1| - 0.0017 18.1 1.6 0.0027 17.5 1.1 1.3 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein tRNA-synt_2b PF00587.20 gi|518652630|ref|YP_008142150.1| - 0.0029 17.1 0.5 0.059 12.9 0.1 2.6 3 0 0 3 3 3 1 tRNA synthetase class II core domain (G, H, P, S and T) DOT1 PF08123.8 gi|518652632|ref|YP_008142152.1| - 0.12 11.6 0.4 0.14 11.4 0.3 1.3 1 1 0 1 1 1 0 Histone methylation protein DOT1 Fibrillarin PF01269.12 gi|518652633|ref|YP_008142153.1| - 9.3e-59 198.1 0.1 1.2e-58 197.7 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin HTH_3 PF01381.17 gi|518652634|ref|YP_008142154.1| - 6.6e-13 48.2 0.9 1.1e-12 47.5 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|518652634|ref|YP_008142154.1| - 3.7e-10 39.7 2.2 5.4e-10 39.1 0.9 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|518652634|ref|YP_008142154.1| - 3.2e-05 24.0 0.0 4.9e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|518652634|ref|YP_008142154.1| - 0.0021 17.6 0.5 0.0038 16.8 0.4 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Thioredoxin_4 PF13462.1 gi|518652634|ref|YP_008142154.1| - 0.0079 16.2 0.1 0.012 15.6 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin zf-Nse PF11789.3 gi|518652634|ref|YP_008142154.1| - 0.11 11.9 1.1 11 5.6 0.0 3.0 3 0 0 3 3 3 0 Zinc-finger of the MIZ type in Nse subunit DUF723 PF05265.8 gi|518652634|ref|YP_008142154.1| - 0.14 12.0 1.9 0.2 11.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF723) DUF2269 PF10027.4 gi|518652635|ref|YP_008142155.1| - 2.2e-05 24.2 8.4 3.6e-05 23.5 5.8 1.3 1 1 0 1 1 1 1 Predicted integral membrane protein (DUF2269) CopD PF05425.8 gi|518652635|ref|YP_008142155.1| - 0.00053 20.1 2.7 0.00053 20.1 1.9 1.6 2 0 0 2 2 2 1 Copper resistance protein D DUF4149 PF13664.1 gi|518652635|ref|YP_008142155.1| - 0.28 11.2 8.6 0.11 12.5 2.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) SHR3_chaperone PF08229.6 gi|518652635|ref|YP_008142155.1| - 6 5.7 8.0 8 5.3 5.5 1.5 1 1 0 1 1 1 0 ER membrane protein SH3 FtsX PF02687.16 gi|518652635|ref|YP_008142155.1| - 7.9 6.2 18.3 20 4.9 7.2 2.4 1 1 1 2 2 2 0 FtsX-like permease family Ribosomal_S7 PF00177.16 gi|518652636|ref|YP_008142156.1| - 6.5e-39 132.8 1.7 7.9e-39 132.5 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.20 gi|518652637|ref|YP_008142157.1| - 6.2e-39 132.1 0.4 7e-39 132.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 MMR_HSR1 PF01926.18 gi|518652638|ref|YP_008142158.1| - 7.4e-20 71.0 0.1 3.4e-19 68.9 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase MMR_HSR1_C PF08438.5 gi|518652638|ref|YP_008142158.1| - 3.4e-13 49.7 0.1 6.2e-13 48.9 0.1 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal TGS PF02824.16 gi|518652638|ref|YP_008142158.1| - 4.7e-11 42.3 0.0 8.1e-11 41.6 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|518652638|ref|YP_008142158.1| - 6.5e-10 38.4 0.0 1.9e-07 30.5 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.18 gi|518652638|ref|YP_008142158.1| - 0.00035 20.4 0.0 0.27 11.0 0.0 2.4 2 0 0 2 2 2 2 Dynamin family YchF-GTPase_C PF06071.8 gi|518652638|ref|YP_008142158.1| - 0.00051 19.7 2.3 0.012 15.3 0.0 3.2 3 1 1 4 4 4 1 Protein of unknown function (DUF933) GTP_EFTU PF00009.22 gi|518652638|ref|YP_008142158.1| - 0.044 13.2 0.1 1 8.7 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_29 PF13555.1 gi|518652638|ref|YP_008142158.1| - 0.052 13.0 0.2 0.12 11.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Miro PF08477.8 gi|518652638|ref|YP_008142158.1| - 0.075 13.5 0.0 0.2 12.1 0.0 1.8 1 0 0 1 1 1 0 Miro-like protein ABC_tran PF00005.22 gi|518652638|ref|YP_008142158.1| - 0.11 12.7 0.1 0.36 11.1 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_21 PF13304.1 gi|518652638|ref|YP_008142158.1| - 6.2 6.6 16.6 0.18 11.7 0.2 2.7 1 1 1 3 3 3 0 AAA domain UPF0179 PF03684.8 gi|518652639|ref|YP_008142159.1| - 6.3e-35 119.8 4.3 7e-35 119.6 3.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) HypA PF01155.14 gi|518652639|ref|YP_008142159.1| - 0.092 12.4 0.8 1.6 8.4 0.1 2.3 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family rve PF00665.21 gi|518652640|ref|YP_008142160.1| - 6.8e-22 77.8 0.0 1.7e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518652640|ref|YP_008142160.1| - 6.9e-06 25.5 2.0 0.00027 20.4 1.4 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518652640|ref|YP_008142160.1| - 3.9e-05 24.3 1.4 9.6e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|518652640|ref|YP_008142160.1| - 0.0071 15.9 0.2 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518652640|ref|YP_008142160.1| - 0.014 15.5 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|518652640|ref|YP_008142160.1| - 0.019 14.9 1.1 0.045 13.7 0.8 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518652640|ref|YP_008142160.1| - 0.028 13.8 1.5 0.045 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Fe-ADH_2 PF13685.1 gi|518652641|ref|YP_008142161.1| - 3e-61 206.8 4.9 3.7e-61 206.5 3.4 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|518652641|ref|YP_008142161.1| - 1.9e-22 79.4 6.1 4.7e-22 78.1 4.2 1.6 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|518652641|ref|YP_008142161.1| - 6.9e-06 25.1 2.6 2.2e-05 23.5 0.5 2.3 2 1 0 2 2 2 1 3-dehydroquinate synthase PalH PF08733.5 gi|518652642|ref|YP_008142162.1| - 0.017 13.9 0.7 0.022 13.6 0.5 1.2 1 0 0 1 1 1 0 PalH/RIM21 Caa3_CtaG PF09678.5 gi|518652642|ref|YP_008142162.1| - 0.025 13.5 1.3 0.044 12.7 0.9 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) Baculo_11_kDa PF06143.6 gi|518652642|ref|YP_008142162.1| - 0.15 11.4 1.6 25 4.3 0.0 3.1 3 0 0 3 3 3 0 Baculovirus 11 kDa family DUF4212 PF13937.1 gi|518652642|ref|YP_008142162.1| - 0.18 11.8 1.4 0.27 11.2 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) DUF2142 PF09913.4 gi|518652642|ref|YP_008142162.1| - 0.27 9.8 7.7 0.33 9.5 4.7 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF485 PF04341.7 gi|518652642|ref|YP_008142162.1| - 0.54 9.9 0.0 0.54 9.9 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function, DUF485 DUF4131 PF13567.1 gi|518652642|ref|YP_008142162.1| - 1.7 7.9 4.8 5.6 6.3 2.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_integrase PF00589.17 gi|518652643|ref|YP_008142163.1| - 1e-46 158.7 0.1 1.5e-46 158.2 0.1 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|518652643|ref|YP_008142163.1| - 1.3e-10 41.4 4.5 2.3e-10 40.6 2.4 1.9 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.2 gi|518652643|ref|YP_008142163.1| - 8.1e-06 25.7 0.0 1.3e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Integrase Phage_int_SAM_1 PF02899.12 gi|518652643|ref|YP_008142163.1| - 0.00013 22.0 0.9 0.00028 20.9 0.7 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF3435 PF11917.3 gi|518652643|ref|YP_008142163.1| - 0.032 12.9 0.1 0.066 11.9 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3435) polyprenyl_synt PF00348.12 gi|518652644|ref|YP_008142164.1| - 3.4e-45 153.9 0.1 1e-44 152.3 0.1 1.6 1 1 0 1 1 1 1 Polyprenyl synthetase CENP-X PF09415.5 gi|518652644|ref|YP_008142164.1| - 0.013 15.3 0.0 0.04 13.7 0.0 1.8 2 0 0 2 2 2 0 CENP-S associating Centromere protein X TPR_11 PF13414.1 gi|518652645|ref|YP_008142165.1| - 7.2e-44 147.2 16.6 6.9e-17 60.8 0.5 4.1 2 1 2 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|518652645|ref|YP_008142165.1| - 9.3e-35 115.7 12.8 5.9e-07 28.9 0.3 6.1 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_1 PF00515.23 gi|518652645|ref|YP_008142165.1| - 3.4e-32 108.7 20.6 1e-08 34.4 0.7 6.2 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|518652645|ref|YP_008142165.1| - 1.2e-20 73.1 8.0 2.2e-08 33.9 0.2 4.2 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|518652645|ref|YP_008142165.1| - 2.7e-19 69.2 7.1 4.8e-06 27.0 0.1 4.0 1 1 5 6 6 6 5 Tetratricopeptide repeat TPR_8 PF13181.1 gi|518652645|ref|YP_008142165.1| - 9.8e-19 65.6 21.9 4e-08 32.4 0.2 6.2 5 1 1 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|518652645|ref|YP_008142165.1| - 2.6e-16 59.2 0.2 7.2e-05 22.5 0.0 4.9 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518652645|ref|YP_008142165.1| - 6.9e-15 54.2 0.0 0.083 13.5 0.0 6.0 1 1 5 6 6 6 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|518652645|ref|YP_008142165.1| - 8e-14 50.6 16.9 0.0076 16.3 0.1 6.6 6 1 1 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|518652645|ref|YP_008142165.1| - 5.6e-12 45.8 4.8 0.0011 19.2 0.6 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|518652645|ref|YP_008142165.1| - 1.9e-09 36.6 0.9 0.44 9.8 0.0 5.4 5 0 0 5 5 5 2 SHNi-TPR Apc3 PF12895.2 gi|518652645|ref|YP_008142165.1| - 2e-09 37.4 6.7 0.00036 20.6 0.4 3.2 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|518652645|ref|YP_008142165.1| - 6.4e-09 35.6 8.3 0.57 10.7 0.0 6.2 6 0 0 6 6 6 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|518652645|ref|YP_008142165.1| - 1.5e-08 33.8 6.6 0.00017 20.5 0.1 3.0 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_7 PF13176.1 gi|518652645|ref|YP_008142165.1| - 2.4e-08 33.1 4.1 0.34 10.8 0.0 6.4 5 2 1 6 6 6 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|518652645|ref|YP_008142165.1| - 2.3e-07 30.1 0.2 0.013 14.5 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|518652645|ref|YP_008142165.1| - 2.2e-06 27.4 6.3 0.00022 21.0 0.1 4.0 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat Apc5 PF12862.2 gi|518652645|ref|YP_008142165.1| - 5.2e-05 23.0 0.1 2.3 8.1 0.0 3.8 3 1 0 3 3 3 2 Anaphase-promoting complex subunit 5 TPR_21 PF09976.4 gi|518652645|ref|YP_008142165.1| - 0.00024 21.0 3.5 0.23 11.4 0.1 2.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|518652645|ref|YP_008142165.1| - 0.0011 18.9 0.6 3.8 7.6 0.0 3.4 2 1 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|518652645|ref|YP_008142165.1| - 0.0024 17.7 4.3 1.3 9.0 0.0 4.8 5 0 0 5 5 5 1 Tetratricopeptide repeat Hydrolase_3 PF08282.7 gi|518652645|ref|YP_008142165.1| - 0.0043 16.6 2.8 0.071 12.6 0.3 2.0 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Syntaxin-6_N PF09177.6 gi|518652645|ref|YP_008142165.1| - 0.015 15.6 0.2 1.2 9.5 0.0 3.2 2 2 1 3 3 3 0 Syntaxin 6, N-terminal RPN7 PF10602.4 gi|518652645|ref|YP_008142165.1| - 0.033 13.5 4.5 3.6 6.9 0.3 3.3 2 2 2 4 4 4 0 26S proteasome subunit RPN7 Lambda_Kil PF06301.6 gi|518652645|ref|YP_008142165.1| - 0.044 13.1 0.0 3.8 7.0 0.0 2.6 2 0 0 2 2 2 0 Bacteriophage lambda Kil protein Rapsyn_N PF10579.4 gi|518652645|ref|YP_008142165.1| - 0.11 12.3 0.0 1.7 8.4 0.0 2.7 3 1 0 3 3 2 0 Rapsyn N-terminal myristoylation and linker region DUF357 PF04010.8 gi|518652645|ref|YP_008142165.1| - 0.76 9.5 12.0 1.6 8.5 0.3 4.2 2 2 3 5 5 5 0 Protein of unknown function (DUF357) ADH_N PF08240.7 gi|518652646|ref|YP_008142166.1| - 1.7e-17 63.1 0.1 2.6e-17 62.5 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.21 gi|518652646|ref|YP_008142166.1| - 9.8e-14 51.0 0.0 2.2e-13 49.9 0.0 1.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.1 gi|518652646|ref|YP_008142166.1| - 7.7e-06 26.8 0.0 1.4e-05 25.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518652646|ref|YP_008142166.1| - 0.0026 16.9 0.0 0.0043 16.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|518652646|ref|YP_008142166.1| - 0.0071 15.9 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_10 PF13460.1 gi|518652646|ref|YP_008142166.1| - 0.014 15.3 0.0 0.022 14.7 0.0 1.5 1 1 0 1 1 1 0 NADH(P)-binding Pyr_redox PF00070.22 gi|518652646|ref|YP_008142166.1| - 0.041 14.2 0.1 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.1 gi|518652646|ref|YP_008142166.1| - 0.096 12.9 0.0 0.16 12.2 0.0 1.5 1 1 0 1 1 1 0 XdhC Rossmann domain Ribul_P_3_epim PF00834.14 gi|518652647|ref|YP_008142167.1| - 1.3e-65 220.2 0.0 1.5e-65 220.1 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family DUF2393 PF09624.5 gi|518652647|ref|YP_008142167.1| - 0.018 14.6 0.3 0.027 13.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) PcrB PF01884.12 gi|518652647|ref|YP_008142167.1| - 0.018 14.2 1.6 0.19 10.9 1.2 2.1 1 1 0 1 1 1 0 PcrB family Trp_syntA PF00290.15 gi|518652647|ref|YP_008142167.1| - 0.032 12.7 0.1 0.047 12.2 0.1 1.2 1 0 0 1 1 1 0 Tryptophan synthase alpha chain Clenterotox PF03505.9 gi|518652647|ref|YP_008142167.1| - 0.078 12.3 0.4 0.19 11.1 0.2 1.6 1 1 0 1 1 1 0 Clostridium enterotoxin AhpC-TSA PF00578.16 gi|518652647|ref|YP_008142167.1| - 0.081 12.6 0.0 0.36 10.5 0.0 1.8 1 1 0 2 2 2 0 AhpC/TSA family ABC1 PF03109.11 gi|518652648|ref|YP_008142168.1| - 1.8e-22 79.5 0.0 3.6e-22 78.5 0.0 1.5 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.17 gi|518652648|ref|YP_008142168.1| - 1.1e-05 24.8 0.3 5.6e-05 22.5 0.2 2.0 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|518652648|ref|YP_008142168.1| - 0.067 12.3 0.5 0.16 11.0 0.1 1.7 1 1 0 2 2 2 0 Protein kinase domain APH PF01636.18 gi|518652648|ref|YP_008142168.1| - 0.076 12.7 0.4 0.18 11.5 0.0 1.8 2 0 0 2 2 2 0 Phosphotransferase enzyme family HSP20 PF00011.16 gi|518652649|ref|YP_008142169.1| - 3.1e-14 52.6 0.2 3.6e-14 52.4 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family GvpH PF05455.6 gi|518652649|ref|YP_008142169.1| - 0.052 13.1 0.0 0.08 12.5 0.0 1.3 1 1 0 1 1 1 0 GvpH DUF4405 PF14358.1 gi|518652650|ref|YP_008142170.1| - 0.23 11.6 4.5 1.6 8.8 0.7 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) MM_CoA_mutase PF01642.17 gi|518652651|ref|YP_008142171.1| - 4.9e-193 641.9 0.0 5.9e-193 641.7 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase GDPD PF03009.12 gi|518652652|ref|YP_008142172.1| - 1e-26 94.0 0.2 1.2e-26 93.8 0.1 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family LSM PF01423.17 gi|518652652|ref|YP_008142172.1| - 0.027 14.0 0.2 0.061 12.8 0.1 1.6 1 0 0 1 1 1 0 LSM domain HTH_33 PF13592.1 gi|518652653|ref|YP_008142173.1| - 4.4e-08 32.5 0.0 7.6e-08 31.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|518652653|ref|YP_008142173.1| - 0.00043 21.0 0.0 0.00059 20.5 0.0 1.2 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518652653|ref|YP_008142173.1| - 0.0019 18.3 0.0 0.0023 18.0 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn helix DUF2087 PF09860.4 gi|518652653|ref|YP_008142173.1| - 0.024 14.3 0.3 0.046 13.4 0.2 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) HTH_Tnp_Tc3_2 PF01498.13 gi|518652653|ref|YP_008142173.1| - 0.061 13.3 0.0 0.095 12.7 0.0 1.4 1 0 0 1 1 1 0 Transposase DUF2001 PF09393.5 gi|518652653|ref|YP_008142173.1| - 0.062 13.0 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2001) DUF3647 PF12363.3 gi|518652653|ref|YP_008142173.1| - 0.1 12.7 0.3 0.15 12.1 0.1 1.3 1 1 0 1 1 1 0 Phage protein DUF1667 PF07892.6 gi|518652653|ref|YP_008142173.1| - 0.12 12.0 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1667) SBP_bac_11 PF13531.1 gi|518652654|ref|YP_008142174.1| - 1e-05 25.3 0.0 1.2e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Ish1 PF10281.4 gi|518652655|ref|YP_008142175.1| - 0.041 13.9 0.0 0.24 11.5 0.0 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Radical_SAM PF04055.16 gi|518652656|ref|YP_008142176.1| - 9.4e-19 68.1 0.0 2.2e-18 67.0 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|518652656|ref|YP_008142176.1| - 6.1e-07 29.4 1.9 9.8e-07 28.8 0.0 2.3 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|518652656|ref|YP_008142176.1| - 1.1e-06 28.8 0.0 3e-06 27.3 0.0 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain Archease PF01951.11 gi|518652657|ref|YP_008142177.1| - 1.7e-26 92.7 0.1 1.9e-26 92.6 0.0 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) gpW PF02831.10 gi|518652657|ref|YP_008142177.1| - 0.13 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 gpW tRNA-synt_1 PF00133.17 gi|518652658|ref|YP_008142178.1| - 7e-65 219.1 1.0 3.5e-63 213.5 0.7 2.5 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|518652658|ref|YP_008142178.1| - 3.6e-25 88.4 0.3 3.4e-12 45.7 0.0 3.3 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|518652658|ref|YP_008142178.1| - 3.2e-13 49.6 0.1 8.3e-13 48.3 0.1 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 gi|518652658|ref|YP_008142178.1| - 5.9e-09 35.4 0.2 4.7e-08 32.5 0.1 2.3 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|518652658|ref|YP_008142178.1| - 2e-08 33.7 0.0 0.00011 21.4 0.0 2.7 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|518652658|ref|YP_008142178.1| - 0.00046 18.9 0.2 0.0017 17.1 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (K) PvlArgDC PF01862.11 gi|518652659|ref|YP_008142179.1| - 3.8e-60 202.2 0.0 4.3e-60 202.0 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DEAD PF00270.24 gi|518652660|ref|YP_008142180.1| - 3.4e-33 114.5 0.1 2e-32 112.0 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase DEAD_assoc PF08494.6 gi|518652660|ref|YP_008142180.1| - 1.2e-23 83.8 0.0 2.5e-23 82.7 0.0 1.6 1 0 0 1 1 1 1 DEAD/H associated Helicase_C PF00271.26 gi|518652660|ref|YP_008142180.1| - 2.3e-16 59.4 0.1 2.2e-14 53.0 0.0 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518652660|ref|YP_008142180.1| - 1.7e-09 37.7 0.1 5.2e-09 36.1 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|518652660|ref|YP_008142180.1| - 0.001 17.9 0.0 0.0022 16.8 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain Zn-ribbon_8 PF09723.5 gi|518652660|ref|YP_008142180.1| - 0.011 15.6 0.4 0.021 14.7 0.3 1.5 1 0 0 1 1 1 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.11 gi|518652660|ref|YP_008142180.1| - 0.024 14.3 1.3 0.8 9.4 0.3 3.0 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain Rad50_zn_hook PF04423.9 gi|518652660|ref|YP_008142180.1| - 0.027 13.9 0.7 0.11 11.9 0.5 2.1 1 0 0 1 1 1 0 Rad50 zinc hook motif AAA_25 PF13481.1 gi|518652660|ref|YP_008142180.1| - 0.11 11.9 0.1 0.94 8.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain DNA_RNApol_7kD PF03604.8 gi|518652660|ref|YP_008142180.1| - 0.13 11.7 3.4 0.29 10.6 2.4 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.2 gi|518652660|ref|YP_008142180.1| - 0.28 11.0 0.1 0.55 10.0 0.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon CCG PF02754.11 gi|518652661|ref|YP_008142181.1| - 8.3e-07 28.9 0.0 8.7e-05 22.4 0.0 2.4 2 0 0 2 2 2 2 Cysteine-rich domain DUF162 PF02589.10 gi|518652662|ref|YP_008142182.1| - 1.2e-46 158.6 0.1 1.6e-46 158.2 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised ACR, YkgG family COG1556 Fer4_8 PF13183.1 gi|518652662|ref|YP_008142182.1| - 5.7e-10 39.0 2.1 1.2e-09 38.0 1.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518652662|ref|YP_008142182.1| - 5.1e-07 29.9 2.9 1.5e-06 28.4 2.1 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|518652662|ref|YP_008142182.1| - 1e-06 29.0 2.3 0.028 14.8 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|518652662|ref|YP_008142182.1| - 1.1e-06 28.9 1.7 2.2e-06 27.9 1.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518652662|ref|YP_008142182.1| - 4.4e-06 26.4 4.3 9.1e-05 22.1 3.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518652662|ref|YP_008142182.1| - 0.00017 21.3 7.3 0.0023 17.7 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|518652662|ref|YP_008142182.1| - 0.00017 21.7 4.2 0.0026 17.9 3.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|518652662|ref|YP_008142182.1| - 0.00062 19.5 4.6 0.012 15.4 0.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.22 gi|518652662|ref|YP_008142182.1| - 0.0012 18.3 7.2 0.005 16.3 0.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|518652662|ref|YP_008142182.1| - 0.0037 17.9 3.6 0.013 16.2 2.5 2.0 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|518652662|ref|YP_008142182.1| - 0.0038 17.0 5.3 0.028 14.2 3.7 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|518652662|ref|YP_008142182.1| - 0.0048 17.1 6.6 0.021 15.1 0.7 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.1 gi|518652662|ref|YP_008142182.1| - 0.0078 15.8 2.0 0.013 15.1 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.2 gi|518652662|ref|YP_008142182.1| - 0.029 14.9 9.2 0.8 10.4 0.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain ATP-synt_E_2 PF08112.6 gi|518652662|ref|YP_008142182.1| - 3.9 7.6 7.0 4.8 7.3 0.9 2.9 3 0 0 3 3 2 0 ATP synthase epsilon subunit Phosphodiest PF01663.17 gi|518652663|ref|YP_008142183.1| - 3.6e-27 95.6 0.0 3.4e-26 92.4 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.7 gi|518652663|ref|YP_008142183.1| - 2.2e-05 24.2 0.0 0.12 11.9 0.0 2.3 2 0 0 2 2 2 2 PglZ domain Metalloenzyme PF01676.13 gi|518652663|ref|YP_008142183.1| - 0.068 12.5 0.0 0.16 11.3 0.0 1.6 1 0 0 1 1 1 0 Metalloenzyme superfamily Peptidase_M1 PF01433.15 gi|518652664|ref|YP_008142184.1| - 7e-100 334.8 0.4 1.1e-99 334.1 0.3 1.3 1 0 0 1 1 1 1 Peptidase family M1 Peptidase_MA_2 PF13485.1 gi|518652664|ref|YP_008142184.1| - 5.9e-17 61.9 0.1 1.2e-16 60.9 0.1 1.5 1 0 0 1 1 1 1 Peptidase MA superfamily ERAP1_C PF11838.3 gi|518652664|ref|YP_008142184.1| - 2.5e-16 59.8 0.3 3.5e-16 59.3 0.2 1.2 1 0 0 1 1 1 1 ERAP1-like C-terminal domain COX15-CtaA PF02628.10 gi|518652665|ref|YP_008142185.1| - 0.0024 16.7 13.0 0.57 8.9 0.3 2.0 1 1 0 1 1 1 1 Cytochrome oxidase assembly protein PepSY_TM_1 PF13172.1 gi|518652665|ref|YP_008142185.1| - 0.041 13.6 2.0 0.041 13.6 1.4 3.5 4 0 0 4 4 4 0 PepSY-associated TM helix DUF2238 PF09997.4 gi|518652665|ref|YP_008142185.1| - 2.8 7.3 11.0 0.23 10.8 3.9 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2238) BLOC1_2 PF10046.4 gi|518652666|ref|YP_008142186.1| - 0.047 13.8 0.2 2.4 8.3 0.1 2.2 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HPS3_Mid PF14762.1 gi|518652666|ref|YP_008142186.1| - 0.071 11.7 0.3 0.098 11.2 0.2 1.2 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, middle region BPL_LplA_LipB PF03099.14 gi|518652667|ref|YP_008142187.1| - 4.3e-11 42.9 0.1 6.7e-11 42.2 0.1 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Pirin PF02678.11 gi|518652668|ref|YP_008142188.1| - 1.3e-35 121.4 0.0 5.2e-35 119.5 0.0 1.9 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.8 gi|518652668|ref|YP_008142188.1| - 1e-25 89.7 0.0 2.3e-24 85.4 0.0 2.2 2 0 0 2 2 2 1 Pirin C-terminal cupin domain ABC2_membrane_4 PF12730.2 gi|518652669|ref|YP_008142189.1| - 1.9e-14 53.4 36.4 4.2e-14 52.2 25.4 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|518652669|ref|YP_008142189.1| - 1.1e-05 24.7 36.8 2.6e-05 23.4 25.5 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|518652669|ref|YP_008142189.1| - 0.00067 18.5 22.8 0.0016 17.3 15.8 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|518652669|ref|YP_008142189.1| - 0.075 12.3 34.3 0.015 14.6 14.6 3.0 2 1 1 3 3 3 0 ABC-2 family transporter protein ABC_tran PF00005.22 gi|518652670|ref|YP_008142190.1| - 1.4e-24 86.9 0.0 2.9e-24 85.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|518652670|ref|YP_008142190.1| - 1.6e-12 48.0 1.2 2.3e-10 40.9 0.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|518652670|ref|YP_008142190.1| - 0.001 18.1 1.1 0.077 12.0 0.1 2.8 2 1 1 3 3 3 1 AAA ATPase domain AAA_29 PF13555.1 gi|518652670|ref|YP_008142190.1| - 0.0038 16.7 0.0 0.0068 15.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|518652670|ref|YP_008142190.1| - 0.0071 16.4 0.0 0.018 15.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|518652670|ref|YP_008142190.1| - 0.016 15.5 2.4 0.048 13.9 1.7 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|518652670|ref|YP_008142190.1| - 0.14 11.7 0.0 0.32 10.5 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA PF00004.24 gi|518652670|ref|YP_008142190.1| - 0.17 12.0 0.8 1.3 9.1 0.2 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Glyco_hydro_1 PF00232.13 gi|518652671|ref|YP_008142191.1| - 3.7e-54 183.6 15.7 1.1e-48 165.6 4.3 2.3 1 1 0 2 2 2 2 Glycosyl hydrolase family 1 TENA_THI-4 PF03070.11 gi|518652672|ref|YP_008142192.1| - 9.2e-26 90.8 2.5 1.2e-25 90.4 1.7 1.2 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Mur_ligase_M PF08245.7 gi|518652673|ref|YP_008142193.1| - 8.1e-14 52.0 0.1 1.3e-13 51.4 0.1 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.16 gi|518652673|ref|YP_008142193.1| - 7.4e-08 32.3 0.0 2.9e-07 30.4 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Cdc6_C PF09079.6 gi|518652674|ref|YP_008142194.1| - 1.8e-17 62.8 0.1 4.1e-17 61.6 0.1 1.7 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|518652674|ref|YP_008142194.1| - 3.2e-10 40.2 0.3 8.9e-09 35.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|518652674|ref|YP_008142194.1| - 2.7e-09 37.2 0.0 1.1e-07 32.0 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|518652674|ref|YP_008142194.1| - 1.5e-08 34.9 0.3 6.7e-08 32.8 0.1 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|518652674|ref|YP_008142194.1| - 6.4e-05 22.7 1.1 0.00033 20.4 0.7 2.0 1 1 0 1 1 1 1 Archaeal ATPase DEAD PF00270.24 gi|518652674|ref|YP_008142194.1| - 0.0007 19.1 0.1 0.23 10.9 0.0 2.5 2 0 0 2 2 2 2 DEAD/DEAH box helicase DUF815 PF05673.8 gi|518652674|ref|YP_008142194.1| - 0.00072 18.5 0.0 0.0012 17.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_10 PF12846.2 gi|518652674|ref|YP_008142194.1| - 0.0064 15.9 2.3 3.1 7.1 0.0 2.8 2 1 0 3 3 3 2 AAA-like domain KAP_NTPase PF07693.9 gi|518652674|ref|YP_008142194.1| - 0.008 15.2 1.9 1.4 7.8 0.1 2.2 1 1 1 2 2 2 2 KAP family P-loop domain AAA_2 PF07724.9 gi|518652674|ref|YP_008142194.1| - 0.0095 15.8 0.1 0.045 13.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) Pox_A32 PF04665.7 gi|518652674|ref|YP_008142194.1| - 0.011 15.0 0.3 0.02 14.1 0.2 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein DUF3568 PF12092.3 gi|518652674|ref|YP_008142194.1| - 0.11 12.1 2.4 0.13 11.9 0.0 2.3 4 0 0 4 4 4 0 Protein of unknown function (DUF3568) IstB_IS21 PF01695.12 gi|518652674|ref|YP_008142194.1| - 0.12 11.7 0.2 13 5.1 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SE PF00437.15 gi|518652674|ref|YP_008142194.1| - 0.13 11.1 0.0 0.26 10.1 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_5 PF07728.9 gi|518652674|ref|YP_008142194.1| - 0.19 11.4 0.8 2.8 7.6 0.3 2.5 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|518652676|ref|YP_008142196.1| - 7.3e-10 39.2 0.3 1.2e-09 38.5 0.2 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|518652676|ref|YP_008142196.1| - 1.4e-06 29.1 0.3 1.8e-06 28.7 0.2 1.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|518652676|ref|YP_008142196.1| - 0.0011 18.8 0.0 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain GATase_5 PF13507.1 gi|518652677|ref|YP_008142197.1| - 4.4e-61 206.0 0.0 4.9e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.19 gi|518652677|ref|YP_008142197.1| - 1.2e-06 28.0 0.0 1.5e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.9 gi|518652677|ref|YP_008142197.1| - 6.2e-05 22.6 0.0 0.0002 21.0 0.0 1.9 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|518652677|ref|YP_008142197.1| - 0.00029 20.3 0.0 0.00067 19.1 0.0 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DUF4066 PF13278.1 gi|518652677|ref|YP_008142197.1| - 0.019 14.2 0.0 0.032 13.5 0.0 1.3 1 0 0 1 1 1 0 Putative amidotransferase Ribosomal_L40e PF01020.12 gi|518652678|ref|YP_008142198.1| - 5.5e-06 25.8 5.9 6.3e-06 25.6 4.1 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 gi|518652678|ref|YP_008142198.1| - 0.0033 17.2 0.6 0.0033 17.1 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652678|ref|YP_008142198.1| - 0.0095 15.1 0.8 0.012 14.8 0.5 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|518652678|ref|YP_008142198.1| - 0.011 15.2 1.6 0.014 14.8 1.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|518652678|ref|YP_008142198.1| - 0.012 15.0 6.4 0.019 14.4 4.5 1.4 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit HypA PF01155.14 gi|518652678|ref|YP_008142198.1| - 0.13 11.9 1.3 0.15 11.7 0.9 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-RanBP PF00641.13 gi|518652678|ref|YP_008142198.1| - 0.23 10.6 3.4 0.32 10.1 2.4 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others zf-A20 PF01754.11 gi|518652678|ref|YP_008142198.1| - 0.27 10.8 3.7 2.5 7.7 0.1 2.1 2 0 0 2 2 2 0 A20-like zinc finger DUF2082 PF09855.4 gi|518652678|ref|YP_008142198.1| - 0.64 9.9 4.3 0.62 9.9 0.1 2.0 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) FeS PF04060.8 gi|518652678|ref|YP_008142198.1| - 3 7.4 6.3 7.5 6.2 0.9 2.4 2 1 0 2 2 2 0 Putative Fe-S cluster zf-C2H2_3 PF13878.1 gi|518652678|ref|YP_008142198.1| - 8.2 6.0 6.3 2.5 7.7 0.4 2.0 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF488 PF04343.8 gi|518652679|ref|YP_008142199.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 DUF2080 PF09853.4 gi|518652680|ref|YP_008142200.1| - 1.4e-13 50.2 0.5 1.6e-13 50.1 0.4 1.1 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) FBPase_3 PF01950.11 gi|518652681|ref|YP_008142201.1| - 4.5e-176 585.2 0.1 5.2e-176 585.0 0.1 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Pyr_redox_2 PF07992.9 gi|518652682|ref|YP_008142202.1| - 1.3e-20 74.1 0.0 4.6e-19 69.0 0.0 2.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518652682|ref|YP_008142202.1| - 7e-14 51.9 8.1 9.7e-14 51.5 0.1 3.3 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518652682|ref|YP_008142202.1| - 9e-06 25.8 0.1 0.021 14.8 0.0 3.1 2 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|518652682|ref|YP_008142202.1| - 0.057 12.3 8.9 2.3 7.0 0.1 3.7 3 1 1 4 4 4 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|518652682|ref|YP_008142202.1| - 0.096 12.7 3.0 12 6.0 0.3 2.9 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.1 gi|518652682|ref|YP_008142202.1| - 0.28 10.0 0.9 0.31 9.9 0.0 1.6 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.17 gi|518652682|ref|YP_008142202.1| - 1.2 7.9 10.3 7.9 5.2 1.7 3.3 2 1 1 3 3 3 0 Glucose inhibited division protein A DUF3939 PF13075.1 gi|518652683|ref|YP_008142203.1| - 0.00044 19.9 1.3 0.029 14.0 0.9 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3939) DUF2764 PF10962.3 gi|518652683|ref|YP_008142203.1| - 0.0013 17.9 3.6 0.0022 17.2 2.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2764) HD_assoc PF13286.1 gi|518652683|ref|YP_008142203.1| - 0.013 15.7 0.9 0.028 14.6 0.6 1.6 1 0 0 1 1 1 0 Phosphohydrolase-associated domain DUF2797 PF10977.3 gi|518652683|ref|YP_008142203.1| - 0.2 11.2 1.3 0.91 9.0 0.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2797) TP_methylase PF00590.15 gi|518652684|ref|YP_008142204.1| - 1.9e-27 96.3 0.0 2.3e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases P_proprotein PF01483.15 gi|518652684|ref|YP_008142204.1| - 0.09 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Proprotein convertase P-domain TP_methylase PF00590.15 gi|518652685|ref|YP_008142205.1| - 5e-28 98.2 0.0 6.2e-28 97.9 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.15 gi|518652686|ref|YP_008142206.1| - 1.9e-24 86.5 0.0 2.6e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_18 PF12847.2 gi|518652686|ref|YP_008142206.1| - 5.4e-13 49.4 0.0 9.8e-13 48.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|518652686|ref|YP_008142206.1| - 5.6e-10 39.1 0.0 1e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.10 gi|518652686|ref|YP_008142206.1| - 3.9e-06 26.1 0.0 6.2e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.12 gi|518652686|ref|YP_008142206.1| - 0.00012 21.1 0.1 0.00039 19.5 0.0 1.8 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_31 PF13847.1 gi|518652686|ref|YP_008142206.1| - 0.00032 20.3 0.0 0.00074 19.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.8 gi|518652686|ref|YP_008142206.1| - 0.0011 18.3 0.1 0.0067 15.7 0.0 2.0 2 0 0 2 2 2 1 Histone methylation protein DOT1 RrnaAD PF00398.15 gi|518652686|ref|YP_008142206.1| - 0.0063 15.5 0.0 0.011 14.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.9 gi|518652686|ref|YP_008142206.1| - 0.024 13.9 0.0 0.062 12.6 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain Ribosomal_S22 PF08136.6 gi|518652686|ref|YP_008142206.1| - 0.055 13.6 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 30S ribosomal protein subunit S22 family DUF1951 PF09188.5 gi|518652686|ref|YP_008142206.1| - 0.058 13.3 0.2 0.42 10.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1951) PrmA PF06325.8 gi|518652686|ref|YP_008142206.1| - 0.062 12.4 0.1 0.15 11.1 0.0 1.6 1 1 1 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.15 gi|518652686|ref|YP_008142206.1| - 0.09 11.8 0.0 0.19 10.7 0.0 1.6 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_26 PF13659.1 gi|518652686|ref|YP_008142206.1| - 0.11 12.5 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain GCD14 PF08704.5 gi|518652686|ref|YP_008142206.1| - 0.12 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit TP_methylase PF00590.15 gi|518652687|ref|YP_008142207.1| - 1.8e-45 155.2 0.0 2.3e-45 154.8 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases POR PF01558.13 gi|518652688|ref|YP_008142208.1| - 9.7e-36 123.2 0.2 1.1e-35 123.0 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|518652689|ref|YP_008142209.1| - 1e-28 99.8 0.1 1.7e-28 99.1 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|518652689|ref|YP_008142209.1| - 1.9e-14 53.7 0.4 3.3e-14 52.9 0.3 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|518652689|ref|YP_008142209.1| - 3.2e-07 30.0 0.3 0.0044 16.5 0.1 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_10 PF13237.1 gi|518652689|ref|YP_008142209.1| - 0.00015 21.5 11.3 0.00034 20.3 7.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|518652689|ref|YP_008142209.1| - 0.00031 20.2 15.9 0.13 11.9 1.1 3.3 2 1 0 2 2 2 2 4Fe-4S binding domain Transket_pyr PF02779.19 gi|518652689|ref|YP_008142209.1| - 0.00046 19.7 2.0 0.64 9.4 0.1 3.1 2 1 0 2 2 2 2 Transketolase, pyrimidine binding domain Fer4_2 PF12797.2 gi|518652689|ref|YP_008142209.1| - 0.00047 19.9 12.9 0.036 13.9 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|518652689|ref|YP_008142209.1| - 0.0033 17.2 20.8 0.026 14.4 1.7 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Transketolase_C PF02780.15 gi|518652689|ref|YP_008142209.1| - 0.0068 16.3 0.4 0.19 11.6 0.0 3.0 2 1 1 3 3 3 1 Transketolase, C-terminal domain Fer4_7 PF12838.2 gi|518652689|ref|YP_008142209.1| - 0.11 12.8 15.6 0.039 14.3 7.9 2.4 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|518652689|ref|YP_008142209.1| - 1.8 9.3 10.7 9.4 7.0 1.1 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|518652689|ref|YP_008142209.1| - 4.9 7.8 12.8 25 5.5 3.3 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain Pyr_redox_2 PF07992.9 gi|518652690|ref|YP_008142210.1| - 3.8e-16 59.5 0.0 5.6e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|518652690|ref|YP_008142210.1| - 0.01 15.6 0.0 0.14 11.9 0.0 2.5 3 0 0 3 3 3 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.14 gi|518652690|ref|YP_008142210.1| - 0.21 10.6 0.1 4.8 6.1 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain DUF1641 PF07849.6 gi|518652691|ref|YP_008142211.1| - 5.2e-08 32.3 0.1 1.5e-07 30.8 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) VWA_2 PF13519.1 gi|518652692|ref|YP_008142212.1| - 2.1e-06 27.9 0.1 2.7e-05 24.3 0.0 2.3 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|518652692|ref|YP_008142212.1| - 7.3e-05 22.5 0.2 0.0004 20.1 0.1 2.2 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|518652692|ref|YP_008142212.1| - 0.0058 15.8 0.0 0.013 14.5 0.0 1.5 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein DUF1194 PF06707.6 gi|518652692|ref|YP_008142212.1| - 0.049 12.6 0.1 0.11 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1194) AAA_5 PF07728.9 gi|518652693|ref|YP_008142213.1| - 1.1e-20 73.7 0.0 2.5e-20 72.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|518652693|ref|YP_008142213.1| - 1.5e-08 34.3 0.2 8e-07 28.7 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|518652693|ref|YP_008142213.1| - 0.00022 21.2 0.0 0.00042 20.3 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|518652693|ref|YP_008142213.1| - 0.00027 21.1 0.0 0.00078 19.6 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) KaiC PF06745.8 gi|518652693|ref|YP_008142213.1| - 0.016 14.3 2.0 2.9 6.9 0.3 2.3 2 0 0 2 2 2 0 KaiC ATP-synt_ab PF00006.20 gi|518652693|ref|YP_008142213.1| - 0.048 13.1 0.0 0.061 12.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.1 gi|518652693|ref|YP_008142213.1| - 0.058 12.7 0.1 0.24 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.1 gi|518652693|ref|YP_008142213.1| - 0.089 12.3 1.0 0.28 10.7 0.7 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|518652693|ref|YP_008142213.1| - 0.14 11.6 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MS_channel PF00924.13 gi|518652694|ref|YP_008142214.1| - 1.5e-21 76.7 10.3 1.5e-21 76.7 7.1 2.2 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF3813 PF12758.2 gi|518652694|ref|YP_008142214.1| - 0.069 13.3 0.2 0.16 12.1 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3813) SecE PF00584.15 gi|518652694|ref|YP_008142214.1| - 0.077 12.5 0.4 0.077 12.5 0.3 3.3 3 1 1 4 4 4 0 SecE/Sec61-gamma subunits of protein translocation complex Oleosin PF01277.12 gi|518652694|ref|YP_008142214.1| - 8.8 5.9 13.1 0.33 10.5 2.0 2.5 2 0 0 2 2 2 0 Oleosin tRNA-synt_2b PF00587.20 gi|518652695|ref|YP_008142215.1| - 2.7e-34 118.2 0.0 4.5e-34 117.5 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|518652695|ref|YP_008142215.1| - 5.8e-21 74.5 6.2 1.1e-20 73.6 4.3 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Nsp1_C PF05064.8 gi|518652695|ref|YP_008142215.1| - 0.0095 15.5 1.5 0.012 15.2 0.4 1.6 2 0 0 2 2 2 1 Nsp1-like C-terminal region DUF3584 PF12128.3 gi|518652695|ref|YP_008142215.1| - 0.016 12.6 0.2 0.021 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) tRNA-synt_2 PF00152.15 gi|518652695|ref|YP_008142215.1| - 0.058 12.1 0.0 0.15 10.8 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) TP_methylase PF00590.15 gi|518652696|ref|YP_008142216.1| - 3.4e-10 40.0 0.0 6.3e-10 39.1 0.0 1.4 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Enolase_C PF00113.17 gi|518652697|ref|YP_008142217.1| - 3.9e-63 213.1 2.6 4.9e-63 212.8 1.8 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|518652697|ref|YP_008142217.1| - 3.4e-33 114.3 0.0 6.2e-33 113.5 0.0 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MAAL_C PF07476.6 gi|518652697|ref|YP_008142217.1| - 0.0021 17.0 0.0 0.0033 16.3 0.0 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus MR_MLE PF01188.16 gi|518652697|ref|YP_008142217.1| - 0.0064 16.9 0.0 0.022 15.3 0.0 1.9 1 1 1 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AIM24 PF01987.12 gi|518652698|ref|YP_008142218.1| - 2e-49 167.9 0.9 2.3e-49 167.8 0.6 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 AAA_32 PF13654.1 gi|518652699|ref|YP_008142219.1| - 6.2e-27 94.4 0.0 1.3e-18 66.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain Lon_C PF05362.8 gi|518652699|ref|YP_008142219.1| - 9.2e-27 93.6 6.2 1.4e-26 93.0 4.3 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Mg_chelatase PF01078.16 gi|518652699|ref|YP_008142219.1| - 2.8e-15 56.0 0.0 2e-09 36.9 0.0 2.9 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|518652699|ref|YP_008142219.1| - 1.1e-14 54.2 0.1 9e-08 31.7 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain MCM PF00493.18 gi|518652699|ref|YP_008142219.1| - 2.4e-13 49.6 0.1 1.4e-05 24.1 0.0 3.3 3 0 0 3 3 3 3 MCM2/3/5 family AAA_5 PF07728.9 gi|518652699|ref|YP_008142219.1| - 1.2e-11 44.5 0.0 0.00016 21.4 0.0 2.9 3 0 0 3 3 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.1 gi|518652699|ref|YP_008142219.1| - 1.5e-09 37.4 0.3 2.9e-09 36.4 0.2 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA PF00004.24 gi|518652699|ref|YP_008142219.1| - 2e-07 31.2 0.0 0.045 13.9 0.0 3.2 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.1 gi|518652699|ref|YP_008142219.1| - 3.1e-07 30.4 0.0 0.0025 17.8 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.1 gi|518652699|ref|YP_008142219.1| - 6e-07 29.6 0.0 0.00019 21.5 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_3 PF07726.6 gi|518652699|ref|YP_008142219.1| - 4.9e-06 26.1 0.0 0.0032 17.0 0.0 2.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|518652699|ref|YP_008142219.1| - 4.5e-05 22.6 0.1 0.2 10.6 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|518652699|ref|YP_008142219.1| - 7.4e-05 22.8 0.0 0.0021 18.0 0.0 2.6 3 0 0 3 3 3 1 AAA ATPase domain NACHT PF05729.7 gi|518652699|ref|YP_008142219.1| - 0.00023 20.8 0.0 0.002 17.8 0.0 2.2 2 0 0 2 2 2 1 NACHT domain T2SE PF00437.15 gi|518652699|ref|YP_008142219.1| - 0.0036 16.2 0.0 0.012 14.5 0.0 1.8 2 0 0 2 2 2 1 Type II/IV secretion system protein TIP49 PF06068.8 gi|518652699|ref|YP_008142219.1| - 0.004 15.9 0.3 0.24 10.0 0.0 2.8 3 0 0 3 3 3 1 TIP49 C-terminus AAA_19 PF13245.1 gi|518652699|ref|YP_008142219.1| - 0.0063 16.2 0.0 0.028 14.1 0.0 2.1 2 0 0 2 2 2 1 Part of AAA domain FtsK_SpoIIIE PF01580.13 gi|518652699|ref|YP_008142219.1| - 0.023 14.1 0.0 0.049 13.1 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_25 PF13481.1 gi|518652699|ref|YP_008142219.1| - 0.042 13.2 0.0 0.11 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|518652699|ref|YP_008142219.1| - 0.045 13.1 0.0 0.12 11.7 0.0 1.6 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.17 gi|518652699|ref|YP_008142219.1| - 0.053 13.6 0.9 0.45 10.7 0.0 2.7 3 0 0 3 3 2 0 RNA helicase DUF2075 PF09848.4 gi|518652699|ref|YP_008142219.1| - 0.092 11.6 0.0 0.28 10.1 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.8 gi|518652699|ref|YP_008142219.1| - 0.1 11.5 0.0 0.25 10.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) PPV_E1_C PF00519.12 gi|518652699|ref|YP_008142219.1| - 0.14 10.7 0.0 0.22 10.0 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase Parvo_NS1 PF01057.12 gi|518652699|ref|YP_008142219.1| - 0.16 10.8 0.0 0.32 9.8 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 CGI-121 PF08617.5 gi|518652700|ref|YP_008142220.1| - 8.8e-08 31.9 0.0 1e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 PfkB PF00294.19 gi|518652701|ref|YP_008142221.1| - 2.4e-40 138.5 0.0 2.9e-40 138.2 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|518652701|ref|YP_008142221.1| - 0.012 14.7 0.1 0.031 13.4 0.1 1.7 1 1 0 1 1 1 0 Phosphomethylpyrimidine kinase CarboxypepD_reg PF13620.1 gi|518652702|ref|YP_008142222.1| - 7.7e-11 41.9 13.1 3.5e-09 36.5 0.6 3.8 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|518652702|ref|YP_008142222.1| - 8.4e-10 38.5 13.6 2.7e-09 36.9 1.1 4.0 3 1 0 3 3 3 2 Domain of unknown function (DUF4480) PEGA PF08308.6 gi|518652702|ref|YP_008142222.1| - 0.00019 21.1 0.1 0.0014 18.3 0.0 2.5 2 0 0 2 2 2 1 PEGA domain phage_tail_N PF08400.5 gi|518652702|ref|YP_008142222.1| - 0.0057 16.3 0.9 0.017 14.7 0.0 2.3 2 0 0 2 2 2 1 Prophage tail fibre N-terminal DUF2012 PF09430.5 gi|518652702|ref|YP_008142222.1| - 0.049 13.4 1.2 3.8 7.3 0.2 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2012) Qn_am_d_aII PF14930.1 gi|518652702|ref|YP_008142222.1| - 0.064 13.2 0.1 18 5.3 0.0 3.3 4 0 0 4 4 4 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II DUF3431 PF11913.3 gi|518652704|ref|YP_008142224.1| - 0.019 14.3 1.8 0.026 13.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3431) 2TM PF13239.1 gi|518652704|ref|YP_008142224.1| - 0.077 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 2TM domain Vezatin PF12632.2 gi|518652704|ref|YP_008142224.1| - 0.48 9.4 7.6 1.3 8.0 5.3 1.7 1 1 0 1 1 1 0 Mysoin-binding motif of peroxisomes AAA_3 PF07726.6 gi|518652705|ref|YP_008142225.1| - 2.4e-62 208.3 0.1 3.6e-62 207.7 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|518652705|ref|YP_008142225.1| - 1.5e-15 57.1 0.0 3e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|518652705|ref|YP_008142225.1| - 3.6e-09 35.8 0.0 6.6e-09 35.0 0.0 1.5 1 1 0 1 1 1 1 MCM2/3/5 family AAA PF00004.24 gi|518652705|ref|YP_008142225.1| - 5.4e-05 23.4 0.0 0.00057 20.1 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.16 gi|518652705|ref|YP_008142225.1| - 0.0001 21.5 0.0 0.12 11.5 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.7 gi|518652705|ref|YP_008142225.1| - 0.00011 21.3 0.1 0.00095 18.2 0.0 2.4 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Sigma54_activat PF00158.21 gi|518652705|ref|YP_008142225.1| - 0.00025 20.5 0.0 0.00061 19.2 0.0 1.6 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF58 PF01882.13 gi|518652706|ref|YP_008142226.1| - 1.6e-08 34.5 0.0 3.2e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 Sds3 PF08598.6 gi|518652706|ref|YP_008142226.1| - 0.081 12.4 0.4 0.15 11.5 0.3 1.3 1 0 0 1 1 1 0 Sds3-like Rhodanese PF00581.15 gi|518652708|ref|YP_008142228.1| - 1.9e-19 70.0 0.0 2.4e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2286 PF10051.4 gi|518652708|ref|YP_008142228.1| - 0.073 12.7 0.1 0.096 12.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2286) Glyco_hydro_15 PF00723.16 gi|518652709|ref|YP_008142229.1| - 1.4e-21 76.6 0.8 1.4e-16 60.1 0.8 2.7 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 DUF608 PF04685.8 gi|518652709|ref|YP_008142229.1| - 8.2e-09 34.6 1.6 4.2e-08 32.3 0.6 2.0 1 1 0 2 2 2 1 Protein of unknown function, DUF608 Bac_rhamnosid PF05592.6 gi|518652709|ref|YP_008142229.1| - 0.0093 14.2 1.4 0.025 12.8 0.1 2.1 2 0 0 2 2 2 1 Bacterial alpha-L-rhamnosidase RuBisCO_small PF00101.15 gi|518652709|ref|YP_008142229.1| - 0.048 13.5 0.4 0.78 9.6 0.0 2.5 2 0 0 2 2 2 0 Ribulose bisphosphate carboxylase, small chain GDE_C PF06202.9 gi|518652710|ref|YP_008142230.1| - 5.9e-97 324.7 0.1 4.6e-96 321.7 0.0 1.9 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|518652710|ref|YP_008142230.1| - 8.6e-51 172.3 0.0 1.2e-50 171.7 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.8 gi|518652710|ref|YP_008142230.1| - 0.0013 17.5 0.0 0.0028 16.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF608 Glyco_hydro_100 PF12899.2 gi|518652710|ref|YP_008142230.1| - 0.0021 16.5 0.0 1 7.6 0.0 2.5 2 1 0 2 2 2 2 Alkaline and neutral invertase Glycos_transf_1 PF00534.15 gi|518652711|ref|YP_008142231.1| - 1.3e-26 93.0 0.0 2.4e-26 92.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|518652711|ref|YP_008142231.1| - 6e-13 49.2 0.0 8.3e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|518652711|ref|YP_008142231.1| - 3.4e-10 39.9 0.0 5.1e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.6 gi|518652711|ref|YP_008142231.1| - 4.6e-10 39.4 0.2 3.6e-08 33.2 0.0 3.0 3 1 0 3 3 3 1 Starch synthase catalytic domain Glyco_trans_1_4 PF13692.1 gi|518652711|ref|YP_008142231.1| - 5.6e-10 39.5 0.0 8.8e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|518652711|ref|YP_008142231.1| - 0.031 14.5 0.0 0.12 12.7 0.0 2.0 2 0 0 2 2 2 0 Glycosyl transferases group 1 Glyco_hydro_57 PF03065.10 gi|518652712|ref|YP_008142232.1| - 1.7e-64 218.0 1.2 5.4e-64 216.3 0.8 1.7 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.16 gi|518652712|ref|YP_008142232.1| - 3.6e-07 29.8 0.0 6.2e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase SapB_1 PF05184.10 gi|518652712|ref|YP_008142232.1| - 0.13 12.0 0.0 3 7.7 0.0 2.6 2 0 0 2 2 2 0 Saposin-like type B, region 1 Desulfoferrod_N PF06397.7 gi|518652713|ref|YP_008142233.1| - 0.035 13.4 0.2 0.07 12.5 0.1 1.5 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain RrnaAD PF00398.15 gi|518652715|ref|YP_008142235.1| - 1.4e-11 43.9 0.0 1.7e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.1 gi|518652715|ref|YP_008142235.1| - 4.9e-08 32.7 0.1 6.1e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652715|ref|YP_008142235.1| - 6.3e-06 26.7 0.0 1e-05 26.0 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|518652715|ref|YP_008142235.1| - 1e-05 25.2 0.1 2.5e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Met-10+ like-protein MTS PF05175.9 gi|518652715|ref|YP_008142235.1| - 2.6e-05 23.6 0.0 3.7e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_5 PF01795.14 gi|518652715|ref|YP_008142235.1| - 4.8e-05 22.7 0.0 6.9e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 MraW methylase family Methyltransf_11 PF08241.7 gi|518652715|ref|YP_008142235.1| - 0.00016 22.1 0.1 0.00065 20.1 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518652715|ref|YP_008142235.1| - 0.00041 20.7 0.0 0.00063 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.1 gi|518652715|ref|YP_008142235.1| - 0.0029 17.3 0.0 0.0063 16.2 0.0 1.5 1 1 0 2 2 2 1 Methyltransferase domain PCMT PF01135.14 gi|518652715|ref|YP_008142235.1| - 0.007 15.9 0.0 0.0098 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|518652715|ref|YP_008142235.1| - 0.0071 16.3 0.0 0.0098 15.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652715|ref|YP_008142235.1| - 0.009 15.7 0.1 0.019 14.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|518652715|ref|YP_008142235.1| - 0.017 13.9 0.0 0.023 13.5 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase PRMT5 PF05185.11 gi|518652715|ref|YP_008142235.1| - 0.029 13.2 0.1 0.038 12.9 0.1 1.3 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Methyltransf_21 PF05050.7 gi|518652715|ref|YP_008142235.1| - 0.029 14.3 0.0 0.066 13.1 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase FkbM domain Nol1_Nop2_Fmu PF01189.12 gi|518652715|ref|YP_008142235.1| - 0.041 13.2 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 NOL1/NOP2/sun family FtsJ PF01728.14 gi|518652715|ref|YP_008142235.1| - 0.049 13.6 0.0 0.064 13.2 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Fibrillarin PF01269.12 gi|518652715|ref|YP_008142235.1| - 0.081 11.8 0.0 0.14 11.0 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin Methyltransf_25 PF13649.1 gi|518652715|ref|YP_008142235.1| - 0.13 12.6 0.0 0.22 11.9 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain DDE_Tnp_1 PF01609.16 gi|518652716|ref|YP_008142236.1| - 2.4e-15 56.6 2.7 3.5e-15 56.1 1.8 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518652716|ref|YP_008142236.1| - 1.9e-11 44.1 0.0 9.9e-11 41.7 0.0 2.0 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518652716|ref|YP_008142236.1| - 6.3e-06 26.0 1.3 9.8e-05 22.1 0.9 2.2 1 1 0 1 1 1 1 Transposase DDE domain PhoH PF02562.11 gi|518652716|ref|YP_008142236.1| - 0.027 13.6 0.1 0.059 12.5 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein ACT_7 PF13840.1 gi|518652717|ref|YP_008142237.1| - 2.4e-05 23.7 0.7 5.5e-05 22.6 0.1 2.0 2 0 0 2 2 2 1 ACT domain TrkA_N PF02254.13 gi|518652717|ref|YP_008142237.1| - 0.045 13.7 0.1 0.1 12.5 0.0 1.7 1 1 0 1 1 1 0 TrkA-N domain MMR_HSR1 PF01926.18 gi|518652718|ref|YP_008142238.1| - 7.6e-17 61.3 0.1 1.8e-16 60.1 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.9 gi|518652718|ref|YP_008142238.1| - 4.1e-15 55.3 0.0 1e-14 54.1 0.0 1.7 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.13 gi|518652718|ref|YP_008142238.1| - 1e-08 34.6 0.0 1.8e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Miro PF08477.8 gi|518652718|ref|YP_008142238.1| - 1.2e-05 25.7 0.0 3.2e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 Miro-like protein SRPRB PF09439.5 gi|518652718|ref|YP_008142238.1| - 0.00088 18.5 0.0 0.0015 17.7 0.0 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Dynamin_N PF00350.18 gi|518652718|ref|YP_008142238.1| - 0.0063 16.3 0.8 1.8 8.3 0.0 2.8 1 1 1 2 2 2 2 Dynamin family PduV-EutP PF10662.4 gi|518652718|ref|YP_008142238.1| - 0.01 15.3 0.6 0.073 12.5 0.4 2.3 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AIG1 PF04548.11 gi|518652718|ref|YP_008142238.1| - 0.019 14.0 0.0 0.031 13.3 0.0 1.4 1 0 0 1 1 1 0 AIG1 family BLOC1_2 PF10046.4 gi|518652718|ref|YP_008142238.1| - 0.075 13.1 0.1 0.35 11.0 0.0 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 tRNA-synt_1c PF00749.16 gi|518652719|ref|YP_008142239.1| - 8.9e-61 205.2 0.1 1.1e-60 204.9 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|518652719|ref|YP_008142239.1| - 4.6e-12 45.9 0.0 2e-11 43.9 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain DNA_gyraseB PF00204.20 gi|518652722|ref|YP_008142242.1| - 3.7e-51 172.7 0.0 8.7e-51 171.5 0.0 1.7 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.16 gi|518652722|ref|YP_008142242.1| - 6.5e-31 105.8 0.1 1.1e-30 105.1 0.1 1.4 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.17 gi|518652722|ref|YP_008142242.1| - 1.5e-28 98.6 0.1 4.1e-28 97.2 0.1 1.8 1 0 0 1 1 1 1 Toprim domain HATPase_c PF02518.21 gi|518652722|ref|YP_008142242.1| - 2.2e-14 53.1 0.1 7.5e-14 51.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim_4 PF13662.1 gi|518652722|ref|YP_008142242.1| - 2.9e-05 23.9 0.1 0.00016 21.6 0.0 2.3 3 0 0 3 3 3 1 Toprim domain HATPase_c_3 PF13589.1 gi|518652722|ref|YP_008142242.1| - 0.00047 19.8 0.0 0.00047 19.8 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.15 gi|518652723|ref|YP_008142243.1| - 5.7e-148 493.2 0.6 5.7e-148 493.2 0.4 1.5 2 0 0 2 2 2 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.8 gi|518652723|ref|YP_008142243.1| - 2.7e-40 135.4 21.5 3.7e-08 32.5 0.1 7.4 7 0 0 7 7 7 6 DNA gyrase C-terminal domain, beta-propeller HN PF00423.14 gi|518652723|ref|YP_008142243.1| - 0.18 10.0 2.0 0.29 9.3 1.4 1.2 1 0 0 1 1 1 0 Haemagglutinin-neuraminidase Phage_gp53 PF11246.3 gi|518652723|ref|YP_008142243.1| - 0.34 10.3 8.5 0.025 14.0 1.7 2.0 2 0 0 2 2 2 0 Base plate wedge protein 53 Cyclase PF04199.8 gi|518652724|ref|YP_008142244.1| - 4.5e-29 101.3 0.0 6.1e-29 100.8 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase OsmC PF02566.14 gi|518652725|ref|YP_008142245.1| - 1.5e-10 41.1 0.0 2.4e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 OsmC-like protein AA_permease_2 PF13520.1 gi|518652726|ref|YP_008142246.1| - 8.5e-42 143.1 59.1 8.5e-42 143.1 41.0 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518652726|ref|YP_008142246.1| - 1e-32 113.1 51.6 1e-32 113.1 35.8 2.0 1 1 1 2 2 2 1 Amino acid permease DEDD_Tnp_IS110 PF01548.12 gi|518652727|ref|YP_008142247.1| - 1.2e-21 76.9 0.0 1.7e-21 76.3 0.0 1.3 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.11 gi|518652727|ref|YP_008142247.1| - 2.6e-14 53.1 0.0 5.1e-14 52.1 0.0 1.5 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DUF2072 PF09845.4 gi|518652727|ref|YP_008142247.1| - 0.003 17.4 2.2 0.91 9.4 0.3 2.4 2 0 0 2 2 2 2 Zn-ribbon containing protein (DUF2072) SecIII_SopE_N PF05364.9 gi|518652727|ref|YP_008142247.1| - 0.064 13.1 0.7 3.6 7.5 0.0 3.1 3 0 0 3 3 3 0 Salmonella type III secretion SopE effector N-terminus Wbp11 PF09429.5 gi|518652727|ref|YP_008142247.1| - 1.1 9.3 3.7 2.3 8.2 0.2 2.6 2 0 0 2 2 2 0 WW domain binding protein 11 Homoserine_dh PF00742.14 gi|518652728|ref|YP_008142248.1| - 5.5e-31 107.6 0.0 7.9e-31 107.1 0.0 1.2 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|518652728|ref|YP_008142248.1| - 3.1e-08 34.0 0.0 6e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|518652728|ref|YP_008142248.1| - 0.00073 19.1 0.1 0.0012 18.4 0.1 1.4 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Saccharop_dh PF03435.13 gi|518652728|ref|YP_008142248.1| - 0.036 13.0 0.0 0.053 12.5 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase DUF1894 PF08979.6 gi|518652729|ref|YP_008142249.1| - 0.022 14.8 0.3 0.024 14.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1894) P5CR_dimer PF14748.1 gi|518652730|ref|YP_008142250.1| - 3e-32 110.8 0.9 4.5e-32 110.2 0.2 1.6 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.12 gi|518652730|ref|YP_008142250.1| - 2.5e-13 50.2 0.4 8.7e-13 48.5 0.1 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|518652730|ref|YP_008142250.1| - 0.0033 17.2 0.1 0.0076 16.0 0.0 1.7 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|518652730|ref|YP_008142250.1| - 0.015 15.0 2.3 0.22 11.2 0.0 2.4 1 1 1 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|518652730|ref|YP_008142250.1| - 0.033 13.6 0.0 0.076 12.4 0.0 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Semialdhyde_dh PF01118.19 gi|518652730|ref|YP_008142250.1| - 0.056 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain CoA_transf_3 PF02515.12 gi|518652731|ref|YP_008142251.1| - 4.7e-32 110.7 0.0 1.4e-31 109.2 0.0 1.8 1 1 0 1 1 1 1 CoA-transferase family III ABC2_membrane_4 PF12730.2 gi|518652732|ref|YP_008142252.1| - 0.0023 17.1 3.2 0.0028 16.8 2.2 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Sdh_cyt PF01127.17 gi|518652732|ref|YP_008142252.1| - 0.0077 16.0 1.9 0.0086 15.9 1.3 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF3784 PF12650.2 gi|518652732|ref|YP_008142252.1| - 0.01 15.7 0.6 0.014 15.2 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF373 PF04123.8 gi|518652732|ref|YP_008142252.1| - 0.012 14.6 0.1 0.013 14.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) SdpI PF13630.1 gi|518652732|ref|YP_008142252.1| - 0.013 15.2 4.4 0.031 13.9 3.0 1.6 1 1 0 1 1 1 0 SdpI/YhfL protein family DUF4013 PF13197.1 gi|518652732|ref|YP_008142252.1| - 0.016 14.5 1.1 0.02 14.2 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) Yip1 PF04893.12 gi|518652732|ref|YP_008142252.1| - 0.021 14.3 1.3 0.024 14.1 0.9 1.0 1 0 0 1 1 1 0 Yip1 domain Colicin_V PF02674.11 gi|518652732|ref|YP_008142252.1| - 0.029 14.2 1.0 0.035 13.9 0.7 1.1 1 0 0 1 1 1 0 Colicin V production protein DUF973 PF06157.6 gi|518652732|ref|YP_008142252.1| - 0.031 13.2 0.7 0.051 12.5 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF973) DUF998 PF06197.8 gi|518652732|ref|YP_008142252.1| - 0.046 13.0 0.0 0.052 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF998) MARVEL PF01284.18 gi|518652732|ref|YP_008142252.1| - 0.048 13.4 0.7 0.056 13.2 0.5 1.1 1 0 0 1 1 1 0 Membrane-associating domain DUF2157 PF09925.4 gi|518652732|ref|YP_008142252.1| - 0.056 13.0 0.5 2.4 7.7 0.0 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF3112 PF11309.3 gi|518652733|ref|YP_008142253.1| - 0.028 14.2 3.7 0.034 13.9 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) RAMP4 PF06624.7 gi|518652733|ref|YP_008142253.1| - 0.055 13.0 1.3 0.055 13.0 0.9 1.6 1 1 0 1 1 1 0 Ribosome associated membrane protein RAMP4 OSTbeta PF15048.1 gi|518652733|ref|YP_008142253.1| - 0.12 12.4 0.2 0.18 11.9 0.1 1.2 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Yip1 PF04893.12 gi|518652733|ref|YP_008142253.1| - 1.3 8.5 12.2 0.65 9.4 6.7 1.7 1 1 1 2 2 2 0 Yip1 domain DUF805 PF05656.9 gi|518652733|ref|YP_008142253.1| - 4.8 7.0 9.7 1.3 8.9 2.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF805) Cytochrom_B_N_2 PF13631.1 gi|518652734|ref|YP_008142254.1| - 4.6e-36 124.1 20.0 4.6e-36 124.1 13.9 2.4 2 1 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.12 gi|518652734|ref|YP_008142254.1| - 0.00017 21.7 3.4 0.00017 21.7 2.3 3.8 2 2 2 4 4 4 1 Cytochrome b(C-terminal)/b6/petD TAT_signal PF10518.4 gi|518652735|ref|YP_008142255.1| - 0.091 12.8 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence MttA_Hcf106 PF02416.11 gi|518652736|ref|YP_008142256.1| - 4.2e-14 51.3 0.3 4.8e-14 51.1 0.2 1.2 1 1 0 1 1 1 1 mttA/Hcf106 family GnsAB PF08178.6 gi|518652736|ref|YP_008142256.1| - 0.11 12.1 1.4 0.34 10.5 0.1 2.2 2 0 0 2 2 2 0 GnsA/GnsB family TatC PF00902.13 gi|518652737|ref|YP_008142257.1| - 8.5e-45 152.7 22.5 1.1e-44 152.4 15.6 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) PGG PF13962.1 gi|518652737|ref|YP_008142257.1| - 3 7.4 13.2 0.67 9.5 0.8 2.8 2 1 0 2 2 2 0 Domain of unknown function Arc_trans_TRASH PF08394.5 gi|518652739|ref|YP_008142259.1| - 5.7e-08 32.7 6.4 1.4e-07 31.4 4.4 1.7 1 0 0 1 1 1 1 Archaeal TRASH domain HTH_24 PF13412.1 gi|518652739|ref|YP_008142259.1| - 2.4e-06 26.8 1.5 4.2e-06 26.0 1.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|518652739|ref|YP_008142259.1| - 9.6e-06 25.2 0.3 2e-05 24.2 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_Mga PF08280.6 gi|518652739|ref|YP_008142259.1| - 2.4e-05 23.9 0.6 4.5e-05 23.1 0.4 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain zf-FCS PF06467.9 gi|518652739|ref|YP_008142259.1| - 0.00029 20.3 3.8 0.0005 19.6 2.6 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif MarR_2 PF12802.2 gi|518652739|ref|YP_008142259.1| - 0.00055 19.5 0.0 0.0008 19.0 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|518652739|ref|YP_008142259.1| - 0.0016 18.0 0.3 0.0031 17.1 0.2 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Mga PF05043.8 gi|518652739|ref|YP_008142259.1| - 0.0023 18.1 1.0 0.0046 17.2 0.7 1.4 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_23 PF13384.1 gi|518652739|ref|YP_008142259.1| - 0.0039 16.7 0.0 0.0071 15.9 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.11 gi|518652739|ref|YP_008142259.1| - 0.0068 15.7 0.0 0.014 14.7 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.7 gi|518652739|ref|YP_008142259.1| - 0.011 15.3 0.6 0.018 14.6 0.4 1.4 1 0 0 1 1 1 0 HTH domain Ecl1 PF12855.2 gi|518652739|ref|YP_008142259.1| - 0.02 14.1 4.9 0.046 13.0 3.4 1.6 1 0 0 1 1 1 0 Life-span regulatory factor TFIIE_alpha PF02002.12 gi|518652739|ref|YP_008142259.1| - 0.025 14.0 0.5 0.046 13.2 0.3 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_AsnC-type PF13404.1 gi|518652739|ref|YP_008142259.1| - 0.025 14.0 0.0 0.048 13.2 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Methyltrn_RNA_4 PF09936.4 gi|518652739|ref|YP_008142259.1| - 0.044 13.2 0.3 0.058 12.8 0.2 1.1 1 0 0 1 1 1 0 SAM-dependent RNA methyltransferase HTH_27 PF13463.1 gi|518652739|ref|YP_008142259.1| - 0.058 13.7 0.1 0.12 12.6 0.0 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|518652739|ref|YP_008142259.1| - 0.063 13.3 0.1 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator TerB-C PF15615.1 gi|518652739|ref|YP_008142259.1| - 0.12 12.6 0.2 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 TerB-C domain HTH_IclR PF09339.5 gi|518652739|ref|YP_008142259.1| - 0.12 11.9 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain Rpr2 PF04032.11 gi|518652739|ref|YP_008142259.1| - 0.3 10.9 4.0 21 5.0 0.4 2.8 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Ta0938 PF11494.3 gi|518652739|ref|YP_008142259.1| - 0.37 10.9 4.6 0.26 11.4 0.8 2.3 1 1 1 3 3 3 0 Ta0938 ATPase-cat_bd PF12156.3 gi|518652739|ref|YP_008142259.1| - 0.78 10.3 5.4 0.28 11.7 1.6 1.8 2 0 0 2 2 2 0 Putative metal-binding domain of cation transport ATPase YHS PF04945.8 gi|518652740|ref|YP_008142260.1| - 3.9e-15 55.4 1.6 4.2e-15 55.3 1.1 1.0 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.9 gi|518652740|ref|YP_008142260.1| - 0.0011 18.5 2.2 0.0013 18.2 1.5 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Arc_trans_TRASH PF08394.5 gi|518652740|ref|YP_008142260.1| - 0.025 14.7 3.3 0.038 14.1 2.3 1.4 1 1 0 1 1 1 0 Archaeal TRASH domain Ta0938 PF11494.3 gi|518652740|ref|YP_008142260.1| - 0.031 14.4 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 Ta0938 Peptidase_C97 PF05903.9 gi|518652740|ref|YP_008142260.1| - 0.037 13.8 0.2 0.038 13.7 0.2 1.1 1 0 0 1 1 1 0 PPPDE putative peptidase domain Ribosomal_L24e PF01246.15 gi|518652740|ref|YP_008142260.1| - 0.051 13.4 0.1 0.054 13.3 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L24e DUF2116 PF09889.4 gi|518652740|ref|YP_008142260.1| - 0.46 10.3 1.8 0.62 9.9 1.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Toxin_13 PF07822.6 gi|518652740|ref|YP_008142260.1| - 0.47 10.3 2.9 0.22 11.4 0.5 1.6 2 0 0 2 2 2 0 Neurotoxin B-IV-like protein E1-E2_ATPase PF00122.15 gi|518652741|ref|YP_008142261.1| - 1.3e-53 181.4 0.5 2.4e-53 180.5 0.3 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.21 gi|518652741|ref|YP_008142261.1| - 1.1e-26 94.6 0.1 7.5e-25 88.6 0.1 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|518652741|ref|YP_008142261.1| - 6.6e-14 52.5 0.0 1.4e-13 51.4 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase YHS PF04945.8 gi|518652741|ref|YP_008142261.1| - 3e-13 49.3 2.3 5.8e-13 48.4 1.6 1.5 1 0 0 1 1 1 1 YHS domain Hydrolase_3 PF08282.7 gi|518652741|ref|YP_008142261.1| - 7.7e-09 35.4 3.2 0.00014 21.5 1.0 2.7 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase zf-FCS PF06467.9 gi|518652741|ref|YP_008142261.1| - 0.0073 15.9 1.0 0.013 15.0 0.7 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif PBP PF01161.15 gi|518652742|ref|YP_008142262.1| - 1.9e-28 99.1 0.0 2.2e-28 98.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Aminotran_1_2 PF00155.16 gi|518652743|ref|YP_008142263.1| - 2.1e-11 43.3 0.0 1.3e-07 30.9 0.0 2.7 1 1 1 2 2 2 2 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|518652743|ref|YP_008142263.1| - 0.024 13.3 0.0 0.038 12.7 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V DUF4118 PF13493.1 gi|518652744|ref|YP_008142264.1| - 1.6 8.9 25.4 1.1 9.4 7.1 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4118) DUF3816 PF12822.2 gi|518652744|ref|YP_008142264.1| - 7.4 6.4 25.7 70 3.2 17.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3816) HTH_3 PF01381.17 gi|518652745|ref|YP_008142265.1| - 1.3e-10 40.9 0.0 3.1e-10 39.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|518652745|ref|YP_008142265.1| - 4.5e-08 33.0 0.0 1.2e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|518652745|ref|YP_008142265.1| - 2.4e-05 24.4 0.0 4.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|518652745|ref|YP_008142265.1| - 0.031 14.0 0.0 0.08 12.7 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain SRP54 PF00448.17 gi|518652746|ref|YP_008142266.1| - 1.3e-74 249.9 0.5 1.3e-74 249.9 0.4 1.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|518652746|ref|YP_008142266.1| - 1.9e-08 34.2 2.2 6.3e-08 32.6 1.5 2.0 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain cobW PF02492.14 gi|518652746|ref|YP_008142266.1| - 2.4e-05 23.8 3.9 0.00011 21.6 2.7 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.18 gi|518652746|ref|YP_008142266.1| - 3.4e-05 23.3 2.5 3.4e-05 23.3 1.8 2.3 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.1 gi|518652746|ref|YP_008142266.1| - 4.3e-05 23.1 0.0 6.8e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain MobB PF03205.9 gi|518652746|ref|YP_008142266.1| - 0.00035 20.2 0.3 0.0011 18.6 0.0 1.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B PIF1 PF05970.9 gi|518652746|ref|YP_008142266.1| - 0.00036 19.5 0.1 0.0006 18.8 0.0 1.3 1 0 0 1 1 1 1 PIF1-like helicase DUF2075 PF09848.4 gi|518652746|ref|YP_008142266.1| - 0.00039 19.5 0.1 0.00063 18.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) G-alpha PF00503.15 gi|518652746|ref|YP_008142266.1| - 0.00066 18.4 0.1 0.0008 18.2 0.1 1.2 1 0 0 1 1 1 1 G-protein alpha subunit GTP_EFTU PF00009.22 gi|518652746|ref|YP_008142266.1| - 0.00074 19.0 0.3 0.0015 18.0 0.2 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Thymidylate_kin PF02223.12 gi|518652746|ref|YP_008142266.1| - 0.00074 18.9 0.6 0.03 13.7 0.0 2.9 3 0 0 3 3 3 1 Thymidylate kinase AAA_22 PF13401.1 gi|518652746|ref|YP_008142266.1| - 0.0017 18.4 0.6 0.011 15.8 0.1 2.1 1 1 1 2 2 2 1 AAA domain AAA PF00004.24 gi|518652746|ref|YP_008142266.1| - 0.0027 17.8 2.0 0.0057 16.8 0.2 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|518652746|ref|YP_008142266.1| - 0.0062 16.4 0.1 0.024 14.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.1 gi|518652746|ref|YP_008142266.1| - 0.0082 15.7 0.5 0.077 12.5 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|518652746|ref|YP_008142266.1| - 0.023 14.5 0.0 0.044 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain Arf PF00025.16 gi|518652746|ref|YP_008142266.1| - 0.029 13.5 0.7 0.15 11.3 0.0 2.1 2 0 0 2 2 2 0 ADP-ribosylation factor family ORC3_N PF07034.6 gi|518652746|ref|YP_008142266.1| - 0.035 13.0 0.1 0.039 12.9 0.1 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 3 N-terminus APS_kinase PF01583.15 gi|518652746|ref|YP_008142266.1| - 0.041 13.5 0.0 0.081 12.5 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_19 PF13245.1 gi|518652746|ref|YP_008142266.1| - 0.043 13.5 0.0 0.087 12.5 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_17 PF13207.1 gi|518652746|ref|YP_008142266.1| - 0.057 14.2 1.4 0.24 12.2 0.1 2.3 2 1 0 2 2 2 0 AAA domain Gp_dh_N PF00044.19 gi|518652746|ref|YP_008142266.1| - 0.057 13.3 0.2 0.4 10.6 0.0 2.2 1 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AAA_11 PF13086.1 gi|518652746|ref|YP_008142266.1| - 0.077 12.5 0.2 0.74 9.3 0.0 2.3 1 1 1 3 3 3 0 AAA domain NTPase_1 PF03266.10 gi|518652746|ref|YP_008142266.1| - 0.48 10.1 4.5 2.6 7.7 0.1 2.8 3 0 0 3 3 3 0 NTPase Prefoldin PF02996.12 gi|518652747|ref|YP_008142267.1| - 2e-16 59.6 6.1 2.6e-16 59.3 4.3 1.2 1 0 0 1 1 1 1 Prefoldin subunit TMF_TATA_bd PF12325.3 gi|518652747|ref|YP_008142267.1| - 0.00057 19.6 7.3 0.0014 18.3 0.3 2.1 2 0 0 2 2 2 1 TATA element modulatory factor 1 TATA binding Prefoldin_2 PF01920.15 gi|518652747|ref|YP_008142267.1| - 0.001 18.8 10.8 0.0081 15.9 2.3 2.1 1 1 1 2 2 2 2 Prefoldin subunit HrcA PF01628.16 gi|518652747|ref|YP_008142267.1| - 0.0016 18.0 3.8 0.0029 17.2 0.1 2.1 1 1 1 2 2 2 1 HrcA protein C terminal domain KIP1 PF07765.7 gi|518652747|ref|YP_008142267.1| - 0.0094 15.7 2.2 0.032 14.0 0.2 2.1 2 0 0 2 2 2 1 KIP1-like protein TEX12 PF15219.1 gi|518652747|ref|YP_008142267.1| - 0.016 15.1 1.2 0.095 12.6 0.1 2.4 1 1 1 2 2 2 0 Testis-expressed 12 Fib_alpha PF08702.5 gi|518652747|ref|YP_008142267.1| - 0.06 13.4 3.5 0.64 10.1 0.2 2.2 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF2951 PF11166.3 gi|518652747|ref|YP_008142267.1| - 0.11 12.4 5.8 0.25 11.2 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) Macscav_rec PF03523.8 gi|518652747|ref|YP_008142267.1| - 0.14 11.9 0.8 0.44 10.3 0.2 2.0 2 0 0 2 2 2 0 Macrophage scavenger receptor TPR_MLP1_2 PF07926.7 gi|518652747|ref|YP_008142267.1| - 0.21 11.3 11.7 0.051 13.3 3.5 2.0 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein CorA PF01544.13 gi|518652747|ref|YP_008142267.1| - 0.27 10.2 2.9 0.68 8.9 0.0 1.9 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Phage_Gp23 PF10669.4 gi|518652747|ref|YP_008142267.1| - 0.4 10.7 2.7 0.38 10.8 0.9 1.6 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) Spectrin PF00435.16 gi|518652747|ref|YP_008142267.1| - 0.91 9.8 4.9 2.1 8.6 0.8 2.2 2 0 0 2 2 2 0 Spectrin repeat SseC PF04888.7 gi|518652747|ref|YP_008142267.1| - 1 8.6 4.2 13 4.9 1.3 2.1 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family DUF948 PF06103.6 gi|518652747|ref|YP_008142267.1| - 1.1 9.1 3.9 1.9 8.4 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1978 PF09321.5 gi|518652747|ref|YP_008142267.1| - 1.4 8.2 7.0 0.48 9.8 0.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1978) PCRF PF03462.13 gi|518652747|ref|YP_008142267.1| - 2.2 7.9 7.0 7.6 6.2 0.9 2.3 1 1 0 2 2 2 0 PCRF domain DUF16 PF01519.11 gi|518652747|ref|YP_008142267.1| - 3.6 7.8 7.4 3.8 7.7 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF972 PF06156.8 gi|518652747|ref|YP_008142267.1| - 10 6.5 7.9 21 5.4 1.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF972) PGK PF00162.14 gi|518652748|ref|YP_008142268.1| - 3e-112 374.9 0.0 3.4e-112 374.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase FMN_bind_2 PF04299.7 gi|518652749|ref|YP_008142269.1| - 1.2e-41 142.0 0.4 1.5e-41 141.7 0.3 1.1 1 0 0 1 1 1 1 Putative FMN-binding domain DUF1251 PF06856.6 gi|518652749|ref|YP_008142269.1| - 0.022 14.2 0.7 0.2 11.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1251) YvrJ PF12841.2 gi|518652749|ref|YP_008142269.1| - 0.069 12.4 0.3 0.18 11.1 0.1 1.9 2 0 0 2 2 2 0 YvrJ protein family Phage_integrase PF00589.17 gi|518652750|ref|YP_008142270.1| - 0.014 15.1 0.0 0.042 13.5 0.0 1.8 2 0 0 2 2 2 0 Phage integrase family YkuI_C PF10388.4 gi|518652750|ref|YP_008142270.1| - 0.063 12.9 0.0 0.28 10.8 0.0 2.0 2 0 0 2 2 2 0 EAL-domain associated signalling protein domain N6_N4_Mtase PF01555.13 gi|518652751|ref|YP_008142271.1| - 2.4e-48 164.6 0.8 2.4e-48 164.6 0.6 2.3 3 0 0 3 3 3 1 DNA methylase Methyltransf_26 PF13659.1 gi|518652751|ref|YP_008142271.1| - 2.1e-06 27.7 0.0 0.00011 22.1 0.0 2.6 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518652751|ref|YP_008142271.1| - 0.0004 19.9 0.3 0.037 13.6 0.0 3.2 4 0 0 4 4 4 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|518652751|ref|YP_008142271.1| - 0.0016 18.8 0.0 0.01 16.2 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652751|ref|YP_008142271.1| - 0.0017 18.1 0.0 0.0094 15.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain DUF4625 PF15418.1 gi|518652751|ref|YP_008142271.1| - 0.015 15.4 0.8 0.037 14.1 0.5 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) MTS PF05175.9 gi|518652751|ref|YP_008142271.1| - 0.047 13.0 0.0 2.7 7.3 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase small domain Big_3_4 PF13754.1 gi|518652751|ref|YP_008142271.1| - 0.11 12.7 1.2 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) PKD PF00801.15 gi|518652751|ref|YP_008142271.1| - 0.14 11.9 0.2 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 PKD domain ResIII PF04851.10 gi|518652752|ref|YP_008142272.1| - 1.6e-18 67.2 0.1 3e-18 66.3 0.1 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|518652752|ref|YP_008142272.1| - 0.004 16.9 0.0 0.01 15.6 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|518652752|ref|YP_008142272.1| - 0.0077 15.7 0.0 0.083 12.3 0.0 2.3 1 1 0 1 1 1 1 DEAD/DEAH box helicase YukC PF10140.4 gi|518652753|ref|YP_008142273.1| - 0.03 12.8 1.7 0.045 12.3 0.0 2.1 3 0 0 3 3 3 0 WXG100 protein secretion system (Wss), protein YukC Gemini_mov PF01708.11 gi|518652753|ref|YP_008142273.1| - 0.62 9.6 2.4 0.82 9.2 0.1 2.2 2 0 0 2 2 2 0 Geminivirus putative movement protein TRAP-gamma PF07074.7 gi|518652753|ref|YP_008142273.1| - 1.6 8.2 10.6 0.57 9.6 0.4 2.7 2 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF788 PF05620.6 gi|518652753|ref|YP_008142273.1| - 5.4 6.8 7.0 6.7 6.5 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF788) XkdW PF09636.5 gi|518652754|ref|YP_008142274.1| - 0.028 14.3 0.2 0.063 13.1 0.1 1.5 2 0 0 2 2 2 0 XkdW protein S_layer_C PF05124.7 gi|518652754|ref|YP_008142274.1| - 0.11 12.1 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 S-layer like family, C-terminal region zf-CHC2 PF01807.15 gi|518652758|ref|YP_008142278.1| - 0.037 13.5 0.0 0.078 12.5 0.0 1.5 1 0 0 1 1 1 0 CHC2 zinc finger HHH_3 PF12836.2 gi|518652760|ref|YP_008142280.1| - 0.032 14.1 0.0 0.054 13.4 0.0 1.4 1 1 0 1 1 1 0 Helix-hairpin-helix motif Luciferase_N PF05295.6 gi|518652760|ref|YP_008142280.1| - 0.052 13.3 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Luciferase/LBP N-terminal domain G-alpha PF00503.15 gi|518652761|ref|YP_008142281.1| - 0.099 11.3 0.3 0.11 11.1 0.2 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Endonuclease_5 PF04493.9 gi|518652762|ref|YP_008142282.1| - 1.4e-35 122.5 0.0 1.8e-35 122.1 0.0 1.1 1 0 0 1 1 1 1 Endonuclease V DNA_binding_1 PF01035.15 gi|518652762|ref|YP_008142282.1| - 6.1e-20 70.7 0.0 1.2e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain IclR PF01614.13 gi|518652762|ref|YP_008142282.1| - 0.0079 15.8 0.0 0.13 11.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial transcriptional regulator DUF3217 PF11506.3 gi|518652762|ref|YP_008142282.1| - 0.1 12.3 0.0 12 5.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3217) MMPL PF03176.10 gi|518652763|ref|YP_008142283.1| - 3.1e-72 243.0 15.9 1.2e-37 129.3 1.9 3.1 3 0 0 3 3 3 3 MMPL family Rpr2 PF04032.11 gi|518652765|ref|YP_008142285.1| - 1.4e-11 44.0 3.2 2.6e-11 43.2 2.2 1.4 1 1 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain zinc_ribbon_5 PF13719.1 gi|518652765|ref|YP_008142285.1| - 0.00013 21.4 3.3 0.00023 20.6 2.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518652765|ref|YP_008142285.1| - 0.00016 21.2 3.3 0.00028 20.4 2.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|518652765|ref|YP_008142285.1| - 0.00084 19.1 0.4 0.0013 18.5 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652765|ref|YP_008142285.1| - 0.0037 16.4 0.6 0.3 10.3 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain Pox_RNA_pol_35 PF03396.10 gi|518652765|ref|YP_008142285.1| - 0.017 14.1 0.0 0.02 13.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit zf-CHCC PF10276.4 gi|518652765|ref|YP_008142285.1| - 0.022 14.6 1.4 0.15 11.8 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger domain WhiA_N PF10298.4 gi|518652765|ref|YP_008142285.1| - 0.028 14.2 0.3 0.04 13.7 0.2 1.4 1 1 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain zinc_ribbon_2 PF13240.1 gi|518652765|ref|YP_008142285.1| - 0.047 13.1 6.7 0.18 11.3 4.7 1.8 1 1 0 1 1 1 0 zinc-ribbon domain Cys_rich_CPXG PF14255.1 gi|518652765|ref|YP_008142285.1| - 0.054 13.3 1.1 0.28 11.0 0.1 2.4 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-RING_5 PF14634.1 gi|518652765|ref|YP_008142285.1| - 0.11 12.2 2.0 0.19 11.4 1.4 1.4 1 0 0 1 1 1 0 zinc-RING finger domain SIR2 PF02146.12 gi|518652765|ref|YP_008142285.1| - 0.11 12.1 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Sir2 family Zn_Tnp_IS1595 PF12760.2 gi|518652765|ref|YP_008142285.1| - 0.12 12.2 1.1 3.3 7.5 0.0 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-Sec23_Sec24 PF04810.10 gi|518652765|ref|YP_008142285.1| - 0.12 11.9 1.9 0.2 11.2 1.3 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger zf-C3HC4_2 PF13923.1 gi|518652765|ref|YP_008142285.1| - 0.13 12.2 5.0 0.24 11.4 3.4 1.5 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) IBR PF01485.16 gi|518652765|ref|YP_008142285.1| - 0.2 11.5 3.3 0.38 10.6 2.3 1.5 1 1 0 1 1 1 0 IBR domain PyrI_C PF02748.10 gi|518652765|ref|YP_008142285.1| - 0.22 10.9 5.6 0.66 9.4 0.1 2.8 2 1 1 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-BED PF02892.10 gi|518652765|ref|YP_008142285.1| - 0.23 11.2 6.7 4 7.2 1.4 2.3 1 1 1 2 2 2 0 BED zinc finger DNA_RNApol_7kD PF03604.8 gi|518652765|ref|YP_008142285.1| - 0.25 10.8 3.0 3.2 7.3 0.4 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Ribosomal_L32p PF01783.18 gi|518652765|ref|YP_008142285.1| - 0.36 11.0 4.9 6.6 7.0 0.0 2.3 1 1 1 2 2 2 0 Ribosomal L32p protein family Hydrolase_3 PF08282.7 gi|518652766|ref|YP_008142286.1| - 6.6e-23 81.5 0.3 1.9e-12 47.3 0.1 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|518652766|ref|YP_008142286.1| - 5.5e-07 29.1 0.1 1.8e-06 27.4 0.0 1.8 2 1 1 3 3 3 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.2 gi|518652766|ref|YP_008142286.1| - 0.0011 19.2 1.0 0.021 14.9 0.1 2.2 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|518652766|ref|YP_008142286.1| - 0.0019 18.6 0.0 0.82 10.0 0.0 2.4 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Amidohydro_1 PF01979.15 gi|518652767|ref|YP_008142287.1| - 2e-12 47.4 0.2 2.6e-11 43.7 0.1 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|518652767|ref|YP_008142287.1| - 3.6e-12 46.8 0.0 7.2e-11 42.6 0.0 2.0 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|518652767|ref|YP_008142287.1| - 0.00012 21.8 1.8 0.00028 20.6 1.3 1.7 1 0 0 1 1 1 1 Amidohydrolase Peptidase_M24 PF00557.19 gi|518652768|ref|YP_008142288.1| - 9.6e-63 211.5 0.0 1.6e-62 210.7 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|518652768|ref|YP_008142288.1| - 4e-13 49.9 0.0 8e-13 49.0 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain SBDS PF01172.13 gi|518652768|ref|YP_008142288.1| - 0.18 11.6 2.2 0.35 10.6 0.3 2.3 2 0 0 2 2 2 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein DNA_primase_lrg PF04104.9 gi|518652769|ref|YP_008142289.1| - 5.4e-30 104.5 0.9 1.4e-29 103.1 0.6 1.6 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit SRP19 PF01922.12 gi|518652770|ref|YP_008142290.1| - 6.2e-08 33.1 0.4 7e-08 32.9 0.3 1.1 1 0 0 1 1 1 1 SRP19 protein Clp1 PF06807.9 gi|518652770|ref|YP_008142290.1| - 0.09 12.5 0.2 0.095 12.4 0.1 1.0 1 0 0 1 1 1 0 Pre-mRNA cleavage complex II protein Clp1 Ribosomal_S8e PF01201.17 gi|518652771|ref|YP_008142291.1| - 4.3e-37 127.1 2.2 4.8e-37 127.0 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e ABC_tran PF00005.22 gi|518652772|ref|YP_008142292.1| - 5.3e-33 114.2 0.0 9.3e-33 113.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.18 gi|518652772|ref|YP_008142292.1| - 2.4e-26 92.7 18.2 4.3e-26 91.9 12.6 1.4 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.14 gi|518652772|ref|YP_008142292.1| - 1.9e-05 23.9 0.1 0.00077 18.7 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|518652772|ref|YP_008142292.1| - 0.00066 19.7 0.6 0.00066 19.7 0.4 4.0 2 2 0 3 3 3 1 AAA domain AAA_19 PF13245.1 gi|518652772|ref|YP_008142292.1| - 0.003 17.2 0.0 0.0069 16.1 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain DUF258 PF03193.11 gi|518652772|ref|YP_008142292.1| - 0.0031 16.7 0.1 0.0052 15.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|518652772|ref|YP_008142292.1| - 0.0035 18.1 0.1 0.081 13.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|518652772|ref|YP_008142292.1| - 0.0039 17.1 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|518652772|ref|YP_008142292.1| - 0.0068 15.9 0.7 0.019 14.5 0.1 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain DUF87 PF01935.12 gi|518652772|ref|YP_008142292.1| - 0.0075 16.1 0.2 0.018 14.8 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_23 PF13476.1 gi|518652772|ref|YP_008142292.1| - 0.017 15.4 0.2 0.017 15.4 0.1 2.4 3 0 0 3 3 2 0 AAA domain MMR_HSR1 PF01926.18 gi|518652772|ref|YP_008142292.1| - 0.022 14.6 0.0 0.06 13.3 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase T2SE PF00437.15 gi|518652772|ref|YP_008142292.1| - 0.023 13.6 0.1 0.048 12.5 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein MobB PF03205.9 gi|518652772|ref|YP_008142292.1| - 0.033 13.8 0.0 0.11 12.2 0.0 1.9 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|518652772|ref|YP_008142292.1| - 0.042 14.1 0.7 0.39 11.0 0.0 2.7 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.7 gi|518652772|ref|YP_008142292.1| - 0.045 12.8 0.0 0.095 11.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Miro PF08477.8 gi|518652772|ref|YP_008142292.1| - 0.05 14.0 0.1 0.13 12.7 0.0 1.7 1 0 0 1 1 1 0 Miro-like protein FtsK_SpoIIIE PF01580.13 gi|518652772|ref|YP_008142292.1| - 0.059 12.8 0.1 0.11 11.9 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family PduV-EutP PF10662.4 gi|518652772|ref|YP_008142292.1| - 0.059 12.8 0.0 0.13 11.7 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.7 gi|518652772|ref|YP_008142292.1| - 0.14 11.8 0.1 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.1 gi|518652772|ref|YP_008142292.1| - 0.14 12.2 1.1 0.45 10.6 0.2 2.2 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|518652772|ref|YP_008142292.1| - 0.16 11.3 0.0 0.33 10.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_membrane_2 PF06472.10 gi|518652772|ref|YP_008142292.1| - 0.22 10.6 12.8 0.36 9.8 8.8 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region 2 ABC_membrane_3 PF13748.1 gi|518652772|ref|YP_008142292.1| - 0.49 9.3 8.0 0.085 11.8 2.3 2.0 2 0 0 2 2 2 0 ABC transporter transmembrane region DUF4191 PF13829.1 gi|518652772|ref|YP_008142292.1| - 7.5 5.6 5.7 0.86 8.6 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) ABC_membrane PF00664.18 gi|518652773|ref|YP_008142293.1| - 4.5e-31 108.2 19.0 6.2e-31 107.8 13.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.22 gi|518652773|ref|YP_008142293.1| - 1.2e-30 106.5 0.0 2e-30 105.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane_3 PF13748.1 gi|518652773|ref|YP_008142293.1| - 2.3e-05 23.5 12.4 2.3e-05 23.5 8.6 2.6 2 1 0 2 2 2 1 ABC transporter transmembrane region SMC_N PF02463.14 gi|518652773|ref|YP_008142293.1| - 0.00019 20.7 2.3 0.0028 16.9 1.6 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|518652773|ref|YP_008142293.1| - 0.0004 19.6 0.0 0.00075 18.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 NTPase_1 PF03266.10 gi|518652773|ref|YP_008142293.1| - 0.00058 19.6 0.5 0.19 11.4 0.0 2.4 2 0 0 2 2 2 1 NTPase T2SE PF00437.15 gi|518652773|ref|YP_008142293.1| - 0.0011 17.8 0.1 0.0026 16.7 0.1 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein ATP-synt_ab PF00006.20 gi|518652773|ref|YP_008142293.1| - 0.0018 17.8 0.0 0.0038 16.7 0.0 1.6 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_17 PF13207.1 gi|518652773|ref|YP_008142293.1| - 0.0019 18.9 0.0 0.0055 17.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518652773|ref|YP_008142293.1| - 0.0046 17.2 0.8 0.086 13.1 0.0 2.8 3 0 0 3 3 2 1 AAA domain DUF87 PF01935.12 gi|518652773|ref|YP_008142293.1| - 0.013 15.3 0.8 0.042 13.6 0.4 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|518652773|ref|YP_008142293.1| - 0.014 15.4 0.2 0.084 13.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|518652773|ref|YP_008142293.1| - 0.021 13.9 0.0 0.054 12.5 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin NB-ARC PF00931.17 gi|518652773|ref|YP_008142293.1| - 0.021 13.6 0.2 0.072 11.9 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain ResIII PF04851.10 gi|518652773|ref|YP_008142293.1| - 0.022 14.5 1.6 0.093 12.5 0.3 2.4 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_29 PF13555.1 gi|518652773|ref|YP_008142293.1| - 0.042 13.3 0.1 0.12 11.9 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain Sigma54_activat PF00158.21 gi|518652773|ref|YP_008142293.1| - 0.061 12.8 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain FtsK_SpoIIIE PF01580.13 gi|518652773|ref|YP_008142293.1| - 0.079 12.4 0.0 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family MobB PF03205.9 gi|518652773|ref|YP_008142293.1| - 0.11 12.1 0.2 0.25 11.0 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.1 gi|518652773|ref|YP_008142293.1| - 0.12 12.1 0.0 0.34 10.6 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain MSC PF09402.5 gi|518652773|ref|YP_008142293.1| - 0.28 9.8 1.2 1.2 7.7 0.6 2.0 2 0 0 2 2 2 0 Man1-Src1p-C-terminal domain AAA_23 PF13476.1 gi|518652773|ref|YP_008142293.1| - 6.8 6.9 8.3 2.4 8.4 3.2 2.2 1 1 1 2 2 2 0 AAA domain MazG PF03819.12 gi|518652774|ref|YP_008142294.1| - 0.0053 16.6 0.4 0.008 16.1 0.3 1.4 1 1 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.2 gi|518652774|ref|YP_008142294.1| - 0.0058 16.5 0.3 0.011 15.6 0.2 1.6 1 1 0 1 1 1 1 MazG-like family N6_Mtase PF02384.11 gi|518652775|ref|YP_008142295.1| - 2.2e-100 335.7 0.0 3.1e-100 335.2 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|518652775|ref|YP_008142295.1| - 2.8e-17 63.4 4.2 2.8e-17 63.4 2.9 2.0 2 0 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|518652775|ref|YP_008142295.1| - 8.9e-10 38.6 0.0 2e-09 37.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|518652775|ref|YP_008142295.1| - 4.5e-09 36.1 0.0 1.6e-08 34.2 0.0 1.9 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|518652775|ref|YP_008142295.1| - 0.00046 19.7 0.0 0.00092 18.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.6 gi|518652775|ref|YP_008142295.1| - 0.0095 16.2 0.1 0.042 14.2 0.1 2.1 1 1 0 1 1 1 1 Eco57I restriction-modification methylase PROCT PF08084.6 gi|518652775|ref|YP_008142295.1| - 0.016 14.9 0.1 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 PROCT (NUC072) domain Cons_hypoth95 PF03602.10 gi|518652775|ref|YP_008142295.1| - 0.038 13.3 0.0 0.12 11.7 0.0 1.8 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|518652775|ref|YP_008142295.1| - 0.044 13.3 0.0 0.37 10.3 0.0 2.2 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Cerato-platanin PF07249.7 gi|518652775|ref|YP_008142295.1| - 0.046 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Cerato-platanin EnY2 PF10163.4 gi|518652775|ref|YP_008142295.1| - 0.06 13.2 1.9 0.21 11.5 0.1 2.4 2 0 0 2 2 2 0 Transcription factor e(y)2 Methyltransf_18 PF12847.2 gi|518652775|ref|YP_008142295.1| - 0.12 12.9 0.0 0.45 11.1 0.0 2.0 1 0 0 1 1 1 0 Methyltransferase domain Nnf1 PF03980.9 gi|518652775|ref|YP_008142295.1| - 0.17 11.8 2.7 9 6.3 1.9 2.7 1 1 0 1 1 1 0 Nnf1 Methylase_S PF01420.14 gi|518652776|ref|YP_008142296.1| - 1.9e-60 203.6 9.9 1.3e-35 122.8 0.5 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain Orthopox_A47 PF06334.6 gi|518652776|ref|YP_008142296.1| - 0.03 13.4 0.1 0.057 12.5 0.1 1.4 1 0 0 1 1 1 0 Orthopoxvirus A47 protein DUF2443 PF10398.4 gi|518652776|ref|YP_008142296.1| - 0.75 9.6 4.8 5.8 6.7 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2443) HSDR_N PF04313.9 gi|518652777|ref|YP_008142297.1| - 1.4e-36 126.1 3.7 1.6e-36 125.8 0.7 2.6 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|518652777|ref|YP_008142297.1| - 2.9e-22 79.3 0.1 9.9e-22 77.6 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HSDR_N_2 PF13588.1 gi|518652777|ref|YP_008142297.1| - 0.0011 18.6 0.0 0.0033 17.1 0.0 1.7 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) PDDEXK_4 PF14281.1 gi|518652777|ref|YP_008142297.1| - 0.0041 17.0 1.4 0.0078 16.0 0.3 2.1 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DEAD PF00270.24 gi|518652777|ref|YP_008142297.1| - 0.0075 15.7 0.0 0.032 13.7 0.0 2.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518652777|ref|YP_008142297.1| - 0.036 13.9 0.0 0.11 12.3 0.0 1.8 1 0 0 1 1 1 0 Helicase conserved C-terminal domain DUF4106 PF13388.1 gi|518652777|ref|YP_008142297.1| - 0.12 11.2 1.5 0.16 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4106) WLM PF08325.5 gi|518652778|ref|YP_008142298.1| - 2.1e-06 27.7 0.0 3.3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 WLM domain DUF45 PF01863.12 gi|518652778|ref|YP_008142298.1| - 8e-05 22.5 3.1 0.0009 19.0 2.2 2.0 1 1 0 1 1 1 1 Protein of unknown function DUF45 SprT-like PF10263.4 gi|518652778|ref|YP_008142298.1| - 0.012 15.3 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 0 SprT-like family Phage_integrase PF00589.17 gi|518652779|ref|YP_008142299.1| - 1.8e-22 79.8 0.1 2.6e-22 79.3 0.1 1.2 1 0 0 1 1 1 1 Phage integrase family DZR PF12773.2 gi|518652779|ref|YP_008142299.1| - 0.0061 16.3 0.6 0.011 15.5 0.4 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|518652779|ref|YP_008142299.1| - 0.0096 15.1 3.4 0.016 14.4 2.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|518652779|ref|YP_008142299.1| - 0.12 11.9 3.0 0.2 11.1 2.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zf-tcix PF14952.1 gi|518652779|ref|YP_008142299.1| - 0.12 11.6 0.8 0.26 10.6 0.5 1.4 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding ZapA PF05164.8 gi|518652781|ref|YP_008142301.1| - 0.013 15.4 0.1 0.016 15.1 0.1 1.2 1 0 0 1 1 1 0 Cell division protein ZapA Prim-Pol PF09250.6 gi|518652783|ref|YP_008142303.1| - 3.1e-24 85.8 0.0 5.7e-24 84.9 0.0 1.4 1 0 0 1 1 1 1 Bifunctional DNA primase/polymerase, N-terminal D5_N PF08706.6 gi|518652783|ref|YP_008142303.1| - 6.4e-07 29.5 0.4 2e-06 27.9 0.3 1.9 1 0 0 1 1 1 1 D5 N terminal like Pox_D5 PF03288.11 gi|518652783|ref|YP_008142303.1| - 2.6e-05 24.4 0.8 0.00056 20.1 0.1 3.0 2 0 0 2 2 2 1 Poxvirus D5 protein-like CutA1 PF03091.10 gi|518652783|ref|YP_008142303.1| - 0.026 14.1 0.4 0.097 12.3 0.3 2.0 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein DUF4435 PF14491.1 gi|518652784|ref|YP_008142304.1| - 0.067 13.0 0.2 0.074 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) LSM PF01423.17 gi|518652785|ref|YP_008142305.1| - 0.0015 18.0 0.3 0.0025 17.3 0.2 1.4 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.1 gi|518652785|ref|YP_008142305.1| - 0.0023 17.8 0.7 0.0054 16.6 0.1 1.9 2 0 0 2 2 2 1 Ataxin 2 SM domain Carboxyl_trans PF01039.17 gi|518652785|ref|YP_008142305.1| - 0.13 10.5 0.1 0.44 8.8 0.1 1.7 2 0 0 2 2 2 0 Carboxyl transferase domain DUF4423 PF14394.1 gi|518652787|ref|YP_008142307.1| - 0.013 15.0 0.1 0.013 15.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_24 PF13412.1 gi|518652787|ref|YP_008142307.1| - 0.037 13.4 0.4 0.062 12.6 0.1 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.1 gi|518652787|ref|YP_008142307.1| - 0.044 13.5 0.0 0.058 13.1 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.14 gi|518652787|ref|YP_008142307.1| - 0.06 13.0 0.0 0.074 12.7 0.0 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HxlR PF01638.12 gi|518652787|ref|YP_008142307.1| - 0.07 12.7 0.1 0.086 12.4 0.1 1.1 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF764 PF05561.6 gi|518652788|ref|YP_008142308.1| - 0.029 13.8 0.1 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF764) DUF3907 PF13047.1 gi|518652791|ref|YP_008142311.1| - 0.1 12.2 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3907) DUF2220 PF09983.4 gi|518652791|ref|YP_008142311.1| - 0.11 11.7 0.1 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) 4HB_MCP_1 PF12729.2 gi|518652793|ref|YP_008142313.1| - 0.026 13.8 1.2 0.27 10.5 0.2 2.2 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction HTH_23 PF13384.1 gi|518652794|ref|YP_008142314.1| - 1.3e-06 27.8 0.0 4.4e-06 26.1 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain Zot PF05707.7 gi|518652794|ref|YP_008142314.1| - 8.8e-05 22.0 0.0 0.12 11.7 0.0 2.5 1 1 1 2 2 2 2 Zonular occludens toxin (Zot) HTH_38 PF13936.1 gi|518652794|ref|YP_008142314.1| - 0.00012 21.5 0.5 0.00042 19.8 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|518652794|ref|YP_008142314.1| - 0.00014 21.4 0.0 0.00026 20.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.1 gi|518652794|ref|YP_008142314.1| - 0.00019 21.3 0.0 0.00061 19.7 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_7 PF02796.10 gi|518652794|ref|YP_008142314.1| - 0.00036 20.3 0.1 0.00082 19.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_11 PF08279.7 gi|518652794|ref|YP_008142314.1| - 0.00041 19.9 0.1 0.0011 18.5 0.1 1.7 1 0 0 1 1 1 1 HTH domain CENP-B_N PF04218.8 gi|518652794|ref|YP_008142314.1| - 0.0015 17.9 0.3 0.0038 16.6 0.2 1.7 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_3 PF01381.17 gi|518652794|ref|YP_008142314.1| - 0.0015 18.2 0.0 0.0054 16.5 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix TrmB PF01978.14 gi|518652794|ref|YP_008142314.1| - 0.0021 17.7 0.1 0.0046 16.6 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB T2SE PF00437.15 gi|518652794|ref|YP_008142314.1| - 0.0032 16.4 0.0 0.0052 15.7 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein HTH_29 PF13551.1 gi|518652794|ref|YP_008142314.1| - 0.0044 17.1 0.0 0.011 15.8 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn helix ResIII PF04851.10 gi|518652794|ref|YP_008142314.1| - 0.0045 16.8 1.3 0.21 11.4 0.0 2.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Sigma70_r4_2 PF08281.7 gi|518652794|ref|YP_008142314.1| - 0.0069 15.8 0.0 0.021 14.2 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 LacI PF00356.16 gi|518652794|ref|YP_008142314.1| - 0.0087 15.6 0.2 0.024 14.2 0.2 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family MarR_2 PF12802.2 gi|518652794|ref|YP_008142314.1| - 0.015 14.9 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 MarR family DUF2481 PF10654.4 gi|518652794|ref|YP_008142314.1| - 0.017 14.7 1.8 0.04 13.5 1.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) HTH_24 PF13412.1 gi|518652794|ref|YP_008142314.1| - 0.03 13.7 0.1 0.08 12.3 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding AAA_17 PF13207.1 gi|518652794|ref|YP_008142314.1| - 0.035 14.9 2.1 0.25 12.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain BRF1 PF07741.8 gi|518652794|ref|YP_008142314.1| - 0.037 14.2 2.6 0.072 13.3 1.8 1.5 1 0 0 1 1 1 0 Brf1-like TBP-binding domain IstB_IS21 PF01695.12 gi|518652794|ref|YP_008142314.1| - 0.042 13.2 0.0 0.35 10.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.1 gi|518652794|ref|YP_008142314.1| - 0.049 13.7 0.1 0.15 12.1 0.0 1.9 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|518652794|ref|YP_008142314.1| - 0.049 13.4 6.6 0.53 10.0 4.6 2.5 1 1 0 1 1 1 0 Domain of unknown function DUF87 AAA PF00004.24 gi|518652794|ref|YP_008142314.1| - 0.051 13.7 0.1 0.23 11.6 0.0 2.2 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) HTH_19 PF12844.2 gi|518652794|ref|YP_008142314.1| - 0.052 13.6 3.0 0.12 12.4 0.0 2.8 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_psq PF05225.11 gi|518652794|ref|YP_008142314.1| - 0.052 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain TetR_N PF00440.18 gi|518652794|ref|YP_008142314.1| - 0.053 13.1 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family AAA_29 PF13555.1 gi|518652794|ref|YP_008142314.1| - 0.075 12.5 0.0 0.22 11.0 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|518652794|ref|YP_008142314.1| - 0.079 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Phage_integrase PF00589.17 gi|518652795|ref|YP_008142315.1| - 3.1e-06 26.9 0.0 1.8e-05 24.4 0.0 1.9 1 1 0 1 1 1 1 Phage integrase family MethyltransfD12 PF02086.10 gi|518652797|ref|YP_008142317.1| - 5.9e-63 212.7 10.1 7.7e-63 212.3 7.0 1.1 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_26 PF13659.1 gi|518652797|ref|YP_008142317.1| - 0.0003 20.8 0.0 0.00065 19.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain HHH_4 PF14490.1 gi|518652797|ref|YP_008142317.1| - 0.0098 15.6 0.1 0.03 14.0 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix containing domain Cons_hypoth95 PF03602.10 gi|518652797|ref|YP_008142317.1| - 0.01 15.2 0.0 0.02 14.3 0.0 1.5 1 1 0 1 1 1 0 Conserved hypothetical protein 95 PDDEXK_3 PF13366.1 gi|518652798|ref|YP_008142318.1| - 0.016 15.2 0.2 0.025 14.6 0.1 1.4 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily F_actin_cap_B PF01115.12 gi|518652798|ref|YP_008142318.1| - 0.028 13.6 0.1 0.032 13.4 0.0 1.1 1 0 0 1 1 1 0 F-actin capping protein, beta subunit DUF4566 PF15130.1 gi|518652798|ref|YP_008142318.1| - 0.044 12.9 0.1 0.055 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4566) NDUFB10 PF10249.4 gi|518652798|ref|YP_008142318.1| - 0.073 13.2 0.2 0.092 12.8 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit 10 Chordopox_A30L PF06015.7 gi|518652799|ref|YP_008142319.1| - 0.065 12.8 2.5 0.082 12.5 1.7 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein APG17 PF04108.7 gi|518652799|ref|YP_008142319.1| - 0.094 11.4 0.3 0.1 11.3 0.2 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 TFIIB PF00382.14 gi|518652800|ref|YP_008142320.1| - 2.2e-42 142.7 4.7 1.9e-21 75.6 0.2 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|518652800|ref|YP_008142320.1| - 8.1e-22 76.2 1.6 1.3e-21 75.5 1.1 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_C PF02984.14 gi|518652800|ref|YP_008142320.1| - 0.00025 20.9 0.0 0.047 13.6 0.0 2.5 2 1 1 3 3 3 1 Cyclin, C-terminal domain zf-ribbon_3 PF13248.1 gi|518652800|ref|YP_008142320.1| - 0.00082 18.5 0.4 0.00082 18.5 0.3 1.8 2 0 0 2 2 2 1 zinc-ribbon domain Sigma70_r4 PF04545.11 gi|518652800|ref|YP_008142320.1| - 0.0014 17.8 0.5 0.02 14.2 0.2 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_AsnC-type PF13404.1 gi|518652800|ref|YP_008142320.1| - 0.0042 16.5 0.2 0.011 15.2 0.2 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Cyclin_N PF00134.18 gi|518652800|ref|YP_008142320.1| - 0.0089 15.5 0.9 0.034 13.6 0.1 2.2 2 1 0 2 2 2 1 Cyclin, N-terminal domain UPF0253 PF06786.7 gi|518652800|ref|YP_008142320.1| - 0.0094 16.0 0.2 0.33 11.0 0.0 2.6 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0253) OrfB_Zn_ribbon PF07282.6 gi|518652800|ref|YP_008142320.1| - 0.015 14.9 0.3 0.034 13.8 0.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain RB_B PF01857.15 gi|518652800|ref|YP_008142320.1| - 0.023 14.1 0.1 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 Retinoblastoma-associated protein B domain Ribosomal_S27e PF01667.12 gi|518652800|ref|YP_008142320.1| - 0.031 13.8 0.1 0.057 12.9 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 HTH_24 PF13412.1 gi|518652800|ref|YP_008142320.1| - 0.032 13.6 0.7 0.068 12.5 0.1 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|518652800|ref|YP_008142320.1| - 0.042 13.5 0.4 0.11 12.1 0.3 1.8 1 0 0 1 1 1 0 HTH domain A2L_zn_ribbon PF08792.5 gi|518652800|ref|YP_008142320.1| - 0.056 12.9 2.3 1 8.9 1.6 2.5 1 1 0 1 1 1 0 A2L zinc ribbon domain Lar_restr_allev PF14354.1 gi|518652800|ref|YP_008142320.1| - 0.082 13.2 0.2 0.22 11.8 0.2 1.7 1 0 0 1 1 1 0 Restriction alleviation protein Lar Prim_Zn_Ribbon PF08273.7 gi|518652800|ref|YP_008142320.1| - 0.084 12.9 0.8 0.17 12.0 0.6 1.4 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-C4_Topoisom PF01396.14 gi|518652800|ref|YP_008142320.1| - 0.093 12.2 1.4 0.19 11.2 1.0 1.5 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Elf1 PF05129.8 gi|518652800|ref|YP_008142320.1| - 0.11 12.2 0.2 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like PhnA_Zn_Ribbon PF08274.7 gi|518652800|ref|YP_008142320.1| - 1.8 8.3 4.6 6.9 6.5 3.2 1.9 1 1 0 1 1 1 0 PhnA Zinc-Ribbon Gar1 PF04410.9 gi|518652801|ref|YP_008142321.1| - 0.0014 18.1 0.1 0.0015 18.0 0.1 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region TFIIB PF00382.14 gi|518652802|ref|YP_008142322.1| - 1.2e-39 133.9 1.7 3.3e-19 68.4 0.3 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|518652802|ref|YP_008142322.1| - 1.6e-17 62.5 1.2 2.5e-17 61.8 0.8 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.11 gi|518652802|ref|YP_008142322.1| - 0.0034 16.6 0.1 0.019 14.2 0.1 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_C PF02984.14 gi|518652802|ref|YP_008142322.1| - 0.0054 16.6 0.1 2 8.3 0.0 2.5 1 1 1 2 2 2 1 Cyclin, C-terminal domain Sigma70_r4_2 PF08281.7 gi|518652802|ref|YP_008142322.1| - 0.011 15.1 0.6 0.095 12.1 0.1 2.7 2 1 1 3 3 3 0 Sigma-70, region 4 TrmB PF01978.14 gi|518652802|ref|YP_008142322.1| - 0.014 15.0 0.9 1.3 8.7 0.1 2.8 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cdc6_C PF09079.6 gi|518652802|ref|YP_008142322.1| - 0.038 13.7 0.1 2.2 8.0 0.0 2.3 2 0 0 2 2 2 0 CDC6, C terminal Zn_Tnp_IS1595 PF12760.2 gi|518652802|ref|YP_008142322.1| - 0.039 13.7 0.3 0.083 12.7 0.2 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|518652802|ref|YP_008142322.1| - 0.1 12.2 0.3 0.24 11.1 0.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain A2L_zn_ribbon PF08792.5 gi|518652802|ref|YP_008142322.1| - 0.23 10.9 4.1 3.7 7.1 0.0 3.0 3 0 0 3 3 3 0 A2L zinc ribbon domain HTH_23 PF13384.1 gi|518652802|ref|YP_008142322.1| - 0.26 11.0 3.8 5.3 6.8 0.1 3.2 2 1 0 2 2 2 0 Homeodomain-like domain Lar_restr_allev PF14354.1 gi|518652802|ref|YP_008142322.1| - 0.49 10.7 2.5 0.38 11.0 0.2 2.0 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.1 gi|518652802|ref|YP_008142322.1| - 0.53 9.5 2.8 1.8 7.9 1.9 1.9 1 1 0 1 1 1 0 zinc-ribbon domain GCD14 PF08704.5 gi|518652803|ref|YP_008142323.1| - 2.8e-27 95.7 0.0 3.8e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.1 gi|518652803|ref|YP_008142323.1| - 2.1e-13 50.1 0.0 3e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652803|ref|YP_008142323.1| - 2.3e-11 44.2 0.0 4.2e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|518652803|ref|YP_008142323.1| - 1.1e-07 31.8 0.0 2.3e-07 30.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|518652803|ref|YP_008142323.1| - 4.4e-07 29.4 0.0 6.8e-07 28.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.7 gi|518652803|ref|YP_008142323.1| - 6.6e-07 29.7 0.0 2.2e-06 28.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|518652803|ref|YP_008142323.1| - 4.5e-05 22.6 0.0 7.1e-05 22.0 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 gi|518652803|ref|YP_008142323.1| - 0.00028 21.3 0.0 0.00086 19.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|518652803|ref|YP_008142323.1| - 0.0018 17.8 0.0 0.0022 17.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.15 gi|518652803|ref|YP_008142323.1| - 0.005 15.8 0.0 0.0076 15.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.8 gi|518652803|ref|YP_008142323.1| - 0.0064 15.6 0.0 0.0099 15.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.13 gi|518652803|ref|YP_008142323.1| - 0.0069 15.9 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.1 gi|518652803|ref|YP_008142323.1| - 0.014 15.1 0.0 0.049 13.3 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_3 PF01596.12 gi|518652803|ref|YP_008142323.1| - 0.018 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase FtsJ PF01728.14 gi|518652803|ref|YP_008142323.1| - 0.12 12.3 0.0 0.2 11.6 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase GATase PF00117.23 gi|518652804|ref|YP_008142324.1| - 4e-36 124.2 0.0 4.4e-36 124.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|518652804|ref|YP_008142324.1| - 9.5e-13 48.0 0.4 1.6e-10 40.8 0.3 2.1 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 gi|518652804|ref|YP_008142324.1| - 3.3e-05 23.6 0.3 0.00044 19.9 0.2 2.0 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Fe_dep_repr_C PF02742.10 gi|518652806|ref|YP_008142326.1| - 1e-14 53.9 0.0 1.6e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR PF01047.17 gi|518652806|ref|YP_008142326.1| - 4.8e-05 22.9 0.0 7e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|518652806|ref|YP_008142326.1| - 6.5e-05 22.6 0.0 0.00011 21.8 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.14 gi|518652806|ref|YP_008142326.1| - 9.8e-05 22.2 0.0 0.00016 21.5 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.2 gi|518652806|ref|YP_008142326.1| - 0.00016 21.2 0.0 0.00023 20.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|518652806|ref|YP_008142326.1| - 0.0002 20.6 0.1 0.00037 19.8 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|518652806|ref|YP_008142326.1| - 0.00039 20.0 0.0 0.0007 19.2 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.11 gi|518652806|ref|YP_008142326.1| - 0.016 14.7 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_17 PF12728.2 gi|518652806|ref|YP_008142326.1| - 0.021 15.0 0.0 0.035 14.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.1 gi|518652806|ref|YP_008142326.1| - 0.022 14.5 0.1 0.064 13.0 0.1 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix GntR PF00392.16 gi|518652806|ref|YP_008142326.1| - 0.036 13.5 0.0 0.06 12.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.7 gi|518652806|ref|YP_008142326.1| - 0.046 13.2 0.0 0.082 12.4 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_28 PF13518.1 gi|518652806|ref|YP_008142326.1| - 0.086 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain His_Phos_1 PF00300.17 gi|518652807|ref|YP_008142327.1| - 8.4e-24 84.4 0.0 2.6e-23 82.8 0.0 1.7 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Thioredox_DsbH PF03190.10 gi|518652808|ref|YP_008142328.1| - 2.4e-71 238.7 0.1 4.4e-71 237.8 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.1 gi|518652808|ref|YP_008142328.1| - 2e-12 46.9 0.0 4.8e-12 45.7 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|518652808|ref|YP_008142328.1| - 2.1e-05 24.6 0.0 7e-05 22.9 0.0 1.9 1 0 0 1 1 1 1 Thioredoxin-like domain GlcNAc_2-epim PF07221.6 gi|518652808|ref|YP_008142328.1| - 0.00095 18.2 0.3 0.048 12.6 0.2 2.5 3 0 0 3 3 3 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_88 PF07470.8 gi|518652808|ref|YP_008142328.1| - 0.0034 16.4 5.1 0.39 9.7 0.2 2.9 2 1 1 3 3 3 2 Glycosyl Hydrolase Family 88 NMD3 PF04981.8 gi|518652809|ref|YP_008142329.1| - 2.7e-38 131.4 3.8 3.5e-38 131.0 2.6 1.1 1 0 0 1 1 1 1 NMD3 family Zn-ribbon_8 PF09723.5 gi|518652809|ref|YP_008142329.1| - 0.016 15.1 3.7 0.064 13.2 0.2 3.0 3 0 0 3 3 3 0 Zinc ribbon domain Ribosomal_S10 PF00338.17 gi|518652809|ref|YP_008142329.1| - 0.085 12.7 0.1 0.65 9.8 0.0 2.5 2 1 0 2 2 2 0 Ribosomal protein S10p/S20e zf-ribbon_3 PF13248.1 gi|518652809|ref|YP_008142329.1| - 0.15 11.3 1.4 1.1 8.5 0.0 2.6 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|518652809|ref|YP_008142329.1| - 0.22 11.3 3.3 0.64 9.8 0.8 2.3 2 0 0 2 2 2 0 Double zinc ribbon Prok-RING_1 PF14446.1 gi|518652809|ref|YP_008142329.1| - 0.61 9.8 9.6 0.16 11.7 0.9 2.8 2 1 1 3 3 3 0 Prokaryotic RING finger family 1 TF_Zn_Ribbon PF08271.7 gi|518652809|ref|YP_008142329.1| - 7.2 6.0 11.1 0.2 11.0 0.3 3.4 4 0 0 4 4 4 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|518652809|ref|YP_008142329.1| - 8.1 6.3 6.1 9.3 6.1 0.0 3.1 3 0 0 3 3 3 0 Transposase zinc-ribbon domain Amidinotransf PF02274.12 gi|518652810|ref|YP_008142330.1| - 4.8e-41 140.7 0.0 7.9e-41 139.9 0.0 1.4 1 0 0 1 1 1 1 Amidinotransferase TPX2 PF06886.6 gi|518652810|ref|YP_008142330.1| - 1.3 9.1 4.6 4.1 7.5 1.9 2.5 2 0 0 2 2 2 0 Targeting protein for Xklp2 (TPX2) Ribosomal_S3Ae PF01015.13 gi|518652811|ref|YP_008142331.1| - 2.2e-53 180.4 2.2 2.6e-53 180.2 1.6 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF3494 PF11999.3 gi|518652812|ref|YP_008142332.1| - 1.4e-64 217.4 26.7 1.4e-64 217.4 18.5 3.4 3 1 1 4 4 4 1 Protein of unknown function (DUF3494) CMV_1a_C PF12503.3 gi|518652812|ref|YP_008142332.1| - 0.032 13.9 0.0 1.2 8.9 0.0 2.7 2 0 0 2 2 2 0 Cucumber mosaic virus 1a protein C terminal DUF307 PF03733.8 gi|518652812|ref|YP_008142332.1| - 0.68 10.4 4.6 11 6.5 0.1 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF307) DUF2250 PF10007.4 gi|518652813|ref|YP_008142333.1| - 3.1e-29 100.7 12.6 1.8e-27 95.0 6.5 2.2 2 0 0 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.1 gi|518652813|ref|YP_008142333.1| - 0.015 14.8 0.1 0.029 13.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF4393 PF14337.1 gi|518652813|ref|YP_008142333.1| - 0.11 11.8 1.1 0.19 11.1 0.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4393) HTH_45 PF14947.1 gi|518652813|ref|YP_008142333.1| - 0.16 11.8 6.1 1.3 8.8 3.2 2.8 2 1 0 2 2 2 0 Winged helix-turn-helix ELFV_dehydrog PF00208.16 gi|518652814|ref|YP_008142334.1| - 1.3e-74 250.8 0.7 1.9e-74 250.3 0.2 1.5 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|518652814|ref|YP_008142334.1| - 7.6e-50 167.8 0.0 1.2e-49 167.2 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.14 gi|518652814|ref|YP_008142334.1| - 0.0086 15.2 0.7 0.018 14.2 0.2 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCNA_N PF00705.13 gi|518652815|ref|YP_008142335.1| - 1.2e-13 50.7 0.4 1.7e-11 43.7 0.1 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|518652815|ref|YP_008142335.1| - 1.3e-05 25.0 0.1 0.00011 22.1 0.0 2.3 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain AdoHcyase PF05221.12 gi|518652816|ref|YP_008142336.1| - 6.6e-54 182.6 0.3 7.5e-54 182.4 0.2 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|518652816|ref|YP_008142336.1| - 1.1e-51 174.9 2.3 1.9e-51 174.1 1.6 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|518652816|ref|YP_008142336.1| - 5.4e-07 28.9 0.2 9.4e-07 28.1 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|518652816|ref|YP_008142336.1| - 6.7e-05 22.3 0.1 0.00012 21.5 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_7 PF13241.1 gi|518652816|ref|YP_008142336.1| - 0.0025 18.0 0.2 0.0071 16.5 0.1 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|518652816|ref|YP_008142336.1| - 0.017 15.1 0.1 0.047 13.7 0.0 1.8 1 0 0 1 1 1 0 TrkA-N domain DUF402 PF04167.8 gi|518652816|ref|YP_008142336.1| - 0.053 13.3 0.7 0.18 11.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF402) AlaDh_PNT_C PF01262.16 gi|518652816|ref|YP_008142336.1| - 0.11 12.0 0.9 0.28 10.7 0.1 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAA_hydrolase PF01557.13 gi|518652817|ref|YP_008142337.1| - 4.5e-57 192.9 0.0 5.7e-57 192.6 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family 2_5_RNA_ligase2 PF13563.1 gi|518652818|ref|YP_008142338.1| - 2.1e-11 43.7 0.0 2.9e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.11 gi|518652818|ref|YP_008142338.1| - 1.9e-07 30.9 0.0 0.017 15.1 0.0 2.2 2 0 0 2 2 2 2 LigT like Phosphoesterase PhosphMutase PF10143.4 gi|518652819|ref|YP_008142339.1| - 1.3e-59 200.6 0.0 1.8e-59 200.2 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|518652819|ref|YP_008142339.1| - 3e-50 170.9 0.0 3.4e-50 170.7 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|518652819|ref|YP_008142339.1| - 4e-08 32.9 0.0 2.3e-07 30.4 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Alk_phosphatase PF00245.15 gi|518652819|ref|YP_008142339.1| - 0.0041 15.8 0.5 0.0064 15.2 0.0 1.5 2 0 0 2 2 2 1 Alkaline phosphatase Sulfatase PF00884.18 gi|518652819|ref|YP_008142339.1| - 0.076 12.1 0.1 0.26 10.4 0.0 1.8 2 0 0 2 2 2 0 Sulfatase Lactamase_B_2 PF12706.2 gi|518652820|ref|YP_008142340.1| - 3.4e-30 105.0 0.0 4.7e-30 104.5 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|518652820|ref|YP_008142340.1| - 1.2e-09 38.1 0.0 9.3e-07 28.6 0.0 2.2 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|518652820|ref|YP_008142340.1| - 0.00019 20.8 0.0 0.00045 19.6 0.0 1.6 1 0 0 1 1 1 1 tRNase Z endonuclease DUF1805 PF08827.6 gi|518652821|ref|YP_008142341.1| - 5.3e-25 86.9 0.6 7e-25 86.6 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) IMS PF00817.15 gi|518652821|ref|YP_008142341.1| - 0.014 15.1 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family TLD PF07534.11 gi|518652821|ref|YP_008142341.1| - 0.14 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 TLD GldM_N PF12081.3 gi|518652822|ref|YP_008142342.1| - 0.0042 16.6 2.9 0.0048 16.4 2.0 1.2 1 0 0 1 1 1 1 GldM N-terminal domain LRR_8 PF13855.1 gi|518652822|ref|YP_008142342.1| - 0.0061 16.2 0.0 0.014 15.1 0.0 1.7 1 0 0 1 1 1 1 Leucine rich repeat Ferritin PF00210.19 gi|518652825|ref|YP_008142345.1| - 0.0087 15.8 2.3 0.011 15.5 1.6 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF892 PF05974.7 gi|518652825|ref|YP_008142345.1| - 0.052 13.3 1.8 0.067 12.9 1.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF892) Oxidored_FMN PF00724.15 gi|518652825|ref|YP_008142345.1| - 0.078 11.9 0.7 0.14 11.0 0.4 1.3 1 1 0 1 1 1 0 NADH:flavin oxidoreductase / NADH oxidase family DUF1957 PF09210.6 gi|518652825|ref|YP_008142345.1| - 0.15 12.1 0.4 0.33 11.0 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1957) NUDIX PF00293.23 gi|518652826|ref|YP_008142346.1| - 4.4e-15 55.5 0.0 6.4e-15 54.9 0.0 1.3 1 1 0 1 1 1 1 NUDIX domain AA_permease PF00324.16 gi|518652827|ref|YP_008142347.1| - 4.7e-30 104.3 54.8 6.4e-30 103.9 38.0 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518652827|ref|YP_008142347.1| - 1.1e-26 93.4 63.1 1.3e-26 93.1 43.7 1.1 1 0 0 1 1 1 1 Amino acid permease DUF962 PF06127.6 gi|518652827|ref|YP_008142347.1| - 0.093 12.6 7.9 25 4.8 1.9 3.9 2 2 1 3 3 3 0 Protein of unknown function (DUF962) GDC-P PF02347.11 gi|518652828|ref|YP_008142348.1| - 1.9e-109 366.2 0.0 2.1e-109 366.0 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_1_2 PF00155.16 gi|518652828|ref|YP_008142348.1| - 0.0065 15.4 0.0 0.0098 14.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|518652828|ref|YP_008142348.1| - 0.016 13.9 0.0 0.025 13.3 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V GDC-P PF02347.11 gi|518652829|ref|YP_008142349.1| - 2.8e-14 52.6 0.6 2.2e-12 46.3 0.1 2.1 2 0 0 2 2 2 2 Glycine cleavage system P-protein Aminotran_5 PF00266.14 gi|518652829|ref|YP_008142349.1| - 1.5e-10 40.4 0.0 2.4e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|518652829|ref|YP_008142349.1| - 6.6e-05 22.0 0.0 0.00042 19.3 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|518652829|ref|YP_008142349.1| - 0.00029 20.0 0.0 0.00043 19.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|518652829|ref|YP_008142349.1| - 0.0045 16.0 0.2 0.01 14.9 0.0 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family YcbB PF08664.5 gi|518652829|ref|YP_008142349.1| - 0.062 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 YcbB domain tRNA_anti-codon PF01336.20 gi|518652830|ref|YP_008142350.1| - 4.3e-12 45.7 1.2 0.00013 21.7 0.2 3.7 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain UPF0179 PF03684.8 gi|518652830|ref|YP_008142350.1| - 0.036 13.6 0.0 2.1 7.8 0.0 2.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0179) tRNA_anti-codon PF01336.20 gi|518652831|ref|YP_008142351.1| - 0.00043 20.0 0.0 0.0008 19.2 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain RuvA_C PF07499.8 gi|518652831|ref|YP_008142351.1| - 0.0033 17.5 0.0 0.0073 16.4 0.0 1.5 1 0 0 1 1 1 1 RuvA, C-terminal domain RPA_C PF08784.6 gi|518652831|ref|YP_008142351.1| - 0.011 16.0 0.0 0.043 14.2 0.0 1.8 2 0 0 2 2 2 0 Replication protein A C terminal TrmB PF01978.14 gi|518652831|ref|YP_008142351.1| - 0.11 12.2 0.0 0.26 10.9 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB NfeD PF01957.13 gi|518652833|ref|YP_008142353.1| - 1.3e-13 51.3 0.7 1.5e-13 51.1 0.5 1.0 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding DUF3139 PF11337.3 gi|518652833|ref|YP_008142353.1| - 6e-05 23.2 1.6 0.0001 22.4 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3139) DUF929 PF06053.6 gi|518652833|ref|YP_008142353.1| - 0.0051 15.9 1.9 0.0062 15.6 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF929) DUF2592 PF10766.4 gi|518652833|ref|YP_008142353.1| - 0.012 14.9 2.1 0.023 14.0 1.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2592) DUF1282 PF06930.7 gi|518652833|ref|YP_008142353.1| - 0.021 14.4 0.5 0.027 14.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) DUF835 PF05763.7 gi|518652833|ref|YP_008142353.1| - 0.064 12.8 0.2 0.087 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF835) UPF0542 PF15086.1 gi|518652833|ref|YP_008142353.1| - 0.065 12.9 0.0 0.097 12.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 Baculo_11_kDa PF06143.6 gi|518652833|ref|YP_008142353.1| - 0.069 12.5 0.9 0.1 11.9 0.6 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family Mycobact_memb PF05423.8 gi|518652833|ref|YP_008142353.1| - 0.085 12.5 0.5 0.13 12.0 0.4 1.3 1 0 0 1 1 1 0 Mycobacterium membrane protein HemY_N PF07219.8 gi|518652833|ref|YP_008142353.1| - 0.089 12.3 0.5 0.13 11.8 0.4 1.2 1 0 0 1 1 1 0 HemY protein N-terminus Chordopox_A13L PF05961.6 gi|518652833|ref|YP_008142353.1| - 0.1 12.5 3.1 0.17 11.8 2.2 1.4 1 0 0 1 1 1 0 Chordopoxvirus A13L protein Strabismus PF06638.6 gi|518652833|ref|YP_008142353.1| - 0.13 10.6 0.1 0.14 10.4 0.1 1.0 1 0 0 1 1 1 0 Strabismus protein Shisa PF13908.1 gi|518652833|ref|YP_008142353.1| - 0.13 12.3 0.8 0.16 12.1 0.6 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator MSC PF09402.5 gi|518652833|ref|YP_008142353.1| - 0.16 10.6 0.5 0.19 10.4 0.3 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain TMEM206 PF15122.1 gi|518652833|ref|YP_008142353.1| - 0.18 10.7 0.6 0.2 10.5 0.4 1.1 1 0 0 1 1 1 0 TMEM206 protein family CATSPERD PF15020.1 gi|518652833|ref|YP_008142353.1| - 0.2 9.6 1.3 0.24 9.3 0.9 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit delta DUF2175 PF09943.4 gi|518652835|ref|YP_008142355.1| - 1.4e-23 82.8 0.0 1.5e-23 82.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2175) LIM PF00412.17 gi|518652835|ref|YP_008142355.1| - 0.11 12.5 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 LIM domain Ribosomal_S27 PF01599.14 gi|518652836|ref|YP_008142356.1| - 4.6e-21 74.3 4.4 5e-21 74.2 3.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a DZR PF12773.2 gi|518652836|ref|YP_008142356.1| - 0.00067 19.4 1.3 0.00076 19.2 0.9 1.1 1 0 0 1 1 1 1 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|518652836|ref|YP_008142356.1| - 0.00067 19.4 2.0 0.0008 19.1 1.4 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain IBR PF01485.16 gi|518652836|ref|YP_008142356.1| - 0.0013 18.5 0.6 0.0014 18.4 0.4 1.1 1 0 0 1 1 1 1 IBR domain OrfB_Zn_ribbon PF07282.6 gi|518652836|ref|YP_008142356.1| - 0.0075 15.9 1.0 0.0078 15.8 0.7 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain NCD3G PF07562.9 gi|518652836|ref|YP_008142356.1| - 0.019 14.6 0.5 0.023 14.4 0.3 1.2 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR A2L_zn_ribbon PF08792.5 gi|518652836|ref|YP_008142356.1| - 0.033 13.6 1.9 0.16 11.4 1.3 2.0 1 1 1 2 2 2 0 A2L zinc ribbon domain DUF2082 PF09855.4 gi|518652836|ref|YP_008142356.1| - 0.037 13.8 6.2 0.14 12.0 1.4 2.3 2 1 1 3 3 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HypA PF01155.14 gi|518652836|ref|YP_008142356.1| - 0.043 13.5 0.7 0.043 13.5 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DUF1936 PF09151.5 gi|518652836|ref|YP_008142356.1| - 0.054 12.9 0.5 0.14 11.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) zf-ribbon_3 PF13248.1 gi|518652836|ref|YP_008142356.1| - 0.057 12.6 0.5 0.057 12.6 0.3 2.1 1 1 1 2 2 2 0 zinc-ribbon domain C1_1 PF00130.17 gi|518652836|ref|YP_008142356.1| - 0.058 13.1 1.0 0.064 12.9 0.7 1.1 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc-ribbons_6 PF07191.7 gi|518652836|ref|YP_008142356.1| - 0.069 12.9 0.3 0.072 12.8 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbons GFA PF04828.9 gi|518652836|ref|YP_008142356.1| - 0.073 13.0 2.4 0.18 11.7 0.1 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.1 gi|518652836|ref|YP_008142356.1| - 0.1 12.2 8.2 3.1 7.5 4.0 2.1 1 1 1 2 2 2 0 Nudix N-terminal Rubredoxin PF00301.15 gi|518652836|ref|YP_008142356.1| - 0.12 12.2 1.4 5.7 6.8 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin zf-tcix PF14952.1 gi|518652836|ref|YP_008142356.1| - 0.15 11.3 0.5 0.15 11.3 0.3 1.7 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zinc_ribbon_2 PF13240.1 gi|518652836|ref|YP_008142356.1| - 0.17 11.4 2.7 0.41 10.2 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF1451 PF07295.6 gi|518652836|ref|YP_008142356.1| - 0.21 11.3 1.0 0.2 11.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) Ribosomal_L37e PF01907.14 gi|518652836|ref|YP_008142356.1| - 0.21 11.3 4.0 0.27 11.0 2.8 1.2 1 0 0 1 1 1 0 Ribosomal protein L37e C1_4 PF07975.7 gi|518652836|ref|YP_008142356.1| - 0.24 11.4 2.7 3.5 7.6 1.9 2.0 1 1 0 1 1 1 0 TFIIH C1-like domain TFIIS_C PF01096.13 gi|518652836|ref|YP_008142356.1| - 0.37 10.4 2.8 11 5.7 0.3 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) ADK_lid PF05191.9 gi|518652836|ref|YP_008142356.1| - 0.45 10.2 8.2 1.2 8.8 2.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-HIT PF04438.11 gi|518652836|ref|YP_008142356.1| - 0.57 9.8 6.6 4.8 6.9 0.2 2.2 2 0 0 2 2 2 0 HIT zinc finger zf-nanos PF05741.8 gi|518652836|ref|YP_008142356.1| - 0.73 9.8 4.5 1.9 8.4 0.2 2.1 1 1 1 2 2 2 0 Nanos RNA binding domain zf-RING_3 PF14369.1 gi|518652836|ref|YP_008142356.1| - 0.76 9.8 3.0 1.1 9.2 0.2 2.0 1 1 1 2 2 2 0 zinc-finger zf-C4_Topoisom PF01396.14 gi|518652836|ref|YP_008142356.1| - 1.1 8.7 6.3 14 5.2 4.2 2.3 1 1 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_4 PF13717.1 gi|518652836|ref|YP_008142356.1| - 1.3 8.7 5.6 9.4 6.0 1.0 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|518652836|ref|YP_008142356.1| - 1.5 8.4 6.0 7.6 6.2 1.1 2.6 2 1 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|518652836|ref|YP_008142356.1| - 1.7 8.5 5.8 10 5.9 3.4 2.0 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-IS66 PF13005.2 gi|518652836|ref|YP_008142356.1| - 1.8 8.5 5.1 1.9 8.5 0.2 2.1 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-C2H2_6 PF13912.1 gi|518652836|ref|YP_008142356.1| - 2.2 8.3 6.1 13 5.8 0.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.5 gi|518652836|ref|YP_008142356.1| - 3.3 7.7 7.2 4.6 7.2 0.4 2.1 1 1 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1 PF03811.8 gi|518652836|ref|YP_008142356.1| - 6.3 6.3 7.5 1.9e+02 1.6 5.2 2.2 1 1 0 1 1 1 0 InsA N-terminal domain zf-ISL3 PF14690.1 gi|518652836|ref|YP_008142356.1| - 7.5 6.6 8.5 1.9e+02 2.1 5.9 2.2 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Ribosomal_S24e PF01282.14 gi|518652837|ref|YP_008142357.1| - 9.1e-20 70.2 1.9 1.1e-19 69.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Glyco_hydro_67C PF07477.7 gi|518652837|ref|YP_008142357.1| - 0.065 12.6 0.0 0.075 12.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus Ribosomal_L13e PF01294.13 gi|518652837|ref|YP_008142357.1| - 0.12 11.8 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L13e DUF359 PF04019.7 gi|518652838|ref|YP_008142358.1| - 6.2e-35 119.1 0.8 8.2e-35 118.8 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Pyridox_ox_2 PF12900.2 gi|518652838|ref|YP_008142358.1| - 0.023 14.5 0.0 0.033 14.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Spt4 PF06093.8 gi|518652839|ref|YP_008142359.1| - 5e-09 35.9 0.1 6.8e-09 35.4 0.1 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.10 gi|518652839|ref|YP_008142359.1| - 0.0099 15.2 0.2 0.013 14.9 0.1 1.2 1 0 0 1 1 1 1 RecR protein Nop10p PF04135.7 gi|518652839|ref|YP_008142359.1| - 0.28 10.9 1.2 0.4 10.4 0.6 1.4 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family S1 PF00575.18 gi|518652840|ref|YP_008142360.1| - 8.7e-14 51.3 0.4 8.7e-14 51.3 0.3 1.8 2 0 0 2 2 2 1 S1 RNA binding domain SHS2_Rpb7-N PF03876.12 gi|518652840|ref|YP_008142360.1| - 1.7e-12 47.2 0.1 4.1e-12 46.0 0.0 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 RNA_pol_Rbc25 PF08292.7 gi|518652840|ref|YP_008142360.1| - 0.14 12.3 0.4 0.7 10.0 0.0 2.1 2 1 1 3 3 3 0 RNA polymerase III subunit Rpc25 tRNA-synt_2 PF00152.15 gi|518652841|ref|YP_008142361.1| - 8.9e-81 271.2 0.3 1.7e-80 270.3 0.2 1.5 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|518652841|ref|YP_008142361.1| - 7.5e-15 54.5 0.1 1.8e-14 53.3 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|518652841|ref|YP_008142361.1| - 0.0022 17.2 0.1 0.074 12.2 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) URO-D PF01208.12 gi|518652842|ref|YP_008142362.1| - 1e-84 284.4 0.0 1.2e-84 284.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF1744 PF08490.7 gi|518652842|ref|YP_008142362.1| - 0.13 10.8 0.0 0.19 10.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) DDE_Tnp_1 PF01609.16 gi|518652843|ref|YP_008142363.1| - 8e-11 41.8 0.3 9.8e-11 41.5 0.2 1.2 1 0 0 1 1 1 1 Transposase DDE domain Ferrochelatase PF00762.14 gi|518652845|ref|YP_008142365.1| - 7.7e-53 179.4 0.0 9.8e-53 179.1 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase GTP_EFTU_D2 PF03144.20 gi|518652846|ref|YP_008142366.1| - 2.1e-09 37.3 0.0 5.4e-09 36.0 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|518652846|ref|YP_008142366.1| - 0.0022 17.5 0.0 0.0066 16.0 0.0 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GARS_A PF01071.14 gi|518652847|ref|YP_008142367.1| - 7.7e-50 169.1 0.4 1.1e-49 168.7 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|518652847|ref|YP_008142367.1| - 5.9e-23 81.2 0.0 1.2e-22 80.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|518652847|ref|YP_008142367.1| - 1e-12 48.0 0.1 5.4e-12 45.7 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|518652847|ref|YP_008142367.1| - 1.3e-11 44.6 0.0 2.3e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Terminase_1 PF03354.10 gi|518652847|ref|YP_008142367.1| - 0.0011 17.5 0.3 0.0016 16.9 0.2 1.2 1 0 0 1 1 1 1 Phage Terminase ATPgrasp_Ter PF15632.1 gi|518652847|ref|YP_008142367.1| - 0.026 13.2 0.0 0.82 8.3 0.0 2.1 2 0 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon DUF387 PF04079.11 gi|518652848|ref|YP_008142368.1| - 1.1e-20 73.5 0.5 1.3e-20 73.3 0.4 1.0 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_11 PF08279.7 gi|518652848|ref|YP_008142368.1| - 1.7e-05 24.3 0.6 0.00013 21.5 0.1 2.4 3 0 0 3 3 3 1 HTH domain HTH_20 PF12840.2 gi|518652848|ref|YP_008142368.1| - 0.026 14.2 0.0 0.83 9.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.14 gi|518652848|ref|YP_008142368.1| - 0.044 13.4 0.7 9.1 6.0 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.14 gi|518652848|ref|YP_008142368.1| - 0.1 12.5 1.1 3 7.8 0.0 2.5 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Transp_cyt_pur PF02133.10 gi|518652849|ref|YP_008142369.1| - 8.6e-29 100.3 34.9 4.5e-28 97.9 24.2 1.9 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin dUTPase PF00692.14 gi|518652850|ref|YP_008142370.1| - 9.8e-13 47.6 0.0 1.2e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 dUTPase CTP_transf_2 PF01467.21 gi|518652851|ref|YP_008142371.1| - 1.7e-18 67.1 0.0 2.1e-18 66.8 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase HIGH_NTase1 PF05636.6 gi|518652851|ref|YP_008142371.1| - 0.016 14.2 0.5 0.42 9.5 0.3 2.1 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.6 gi|518652851|ref|YP_008142371.1| - 0.046 13.1 0.4 4.2 6.7 0.0 2.5 2 1 1 3 3 3 0 Citrate lyase ligase C-terminal domain DNA_pol_B PF00136.16 gi|518652852|ref|YP_008142372.1| - 2.9e-72 243.9 0.5 5.9e-72 242.9 0.4 1.5 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|518652852|ref|YP_008142372.1| - 4.2e-18 65.2 5.0 2e-11 43.3 0.1 2.6 1 1 1 2 2 2 2 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.4 gi|518652852|ref|YP_008142372.1| - 2.9e-06 26.9 0.1 6.6e-06 25.8 0.1 1.5 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DUF1744 PF08490.7 gi|518652852|ref|YP_008142372.1| - 9.7e-06 24.4 0.0 1.7e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1744) RNase_H_2 PF13482.1 gi|518652852|ref|YP_008142372.1| - 0.00017 21.4 0.7 0.0012 18.7 0.5 2.3 1 1 0 1 1 1 1 RNase_H superfamily DNA_pol_B_3 PF08408.5 gi|518652852|ref|YP_008142372.1| - 0.0053 16.6 3.5 0.015 15.1 0.1 2.8 3 0 0 3 3 3 1 DNA polymerase family B viral insert Aminotran_4 PF01063.14 gi|518652852|ref|YP_008142372.1| - 0.065 12.6 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class IV DNA_pol_B_2 PF03175.8 gi|518652852|ref|YP_008142372.1| - 0.11 11.1 12.3 0.061 11.9 4.1 3.2 2 2 1 3 3 3 0 DNA polymerase type B, organellar and viral MFS_1 PF07690.11 gi|518652853|ref|YP_008142373.1| - 4.1e-29 101.4 41.2 1.3e-20 73.4 12.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|518652853|ref|YP_008142373.1| - 2.8e-06 26.0 38.7 1.2e-05 23.9 26.8 1.8 1 1 0 1 1 1 1 MFS/sugar transport protein OATP PF03137.15 gi|518652853|ref|YP_008142373.1| - 0.11 10.5 15.6 0.013 13.5 1.0 2.8 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family tRNA-synt_2d PF01409.15 gi|518652854|ref|YP_008142374.1| - 3.7e-84 281.8 0.0 4.9e-84 281.3 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|518652854|ref|YP_008142374.1| - 0.00031 19.6 1.3 0.76 8.4 0.0 3.4 4 1 0 5 5 5 2 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 gi|518652854|ref|YP_008142374.1| - 0.05 13.1 0.0 0.2 11.2 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) XH PF03469.9 gi|518652854|ref|YP_008142374.1| - 0.073 12.7 0.2 0.49 10.0 0.1 2.1 2 0 0 2 2 2 0 XH domain KH_1 PF00013.24 gi|518652855|ref|YP_008142375.1| - 2.2e-09 36.8 0.4 8e-09 35.0 0.3 2.0 1 0 0 1 1 1 1 KH domain T2SE PF00437.15 gi|518652855|ref|YP_008142375.1| - 1.4e-07 30.6 0.1 3e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_3 PF13014.1 gi|518652855|ref|YP_008142375.1| - 6.8e-06 25.5 0.0 2e-05 24.1 0.0 1.9 1 0 0 1 1 1 1 KH domain AAA_17 PF13207.1 gi|518652855|ref|YP_008142375.1| - 6.4e-05 23.7 0.2 0.00066 20.4 0.0 2.7 3 1 0 3 3 3 1 AAA domain KH_2 PF07650.12 gi|518652855|ref|YP_008142375.1| - 0.00017 21.0 0.6 0.00072 19.0 0.4 2.2 1 0 0 1 1 1 1 KH domain AAA_25 PF13481.1 gi|518652855|ref|YP_008142375.1| - 0.0002 20.7 0.0 0.0043 16.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain KH_4 PF13083.1 gi|518652855|ref|YP_008142375.1| - 0.00057 19.4 0.2 0.0024 17.4 0.1 2.1 1 0 0 1 1 1 1 KH domain AAA_14 PF13173.1 gi|518652855|ref|YP_008142375.1| - 0.00071 19.4 0.1 0.01 15.7 0.0 2.6 2 1 1 3 3 3 1 AAA domain ArgK PF03308.11 gi|518652855|ref|YP_008142375.1| - 0.0033 16.2 0.1 0.015 14.0 0.0 2.1 2 0 0 2 2 2 1 ArgK protein FtsK_SpoIIIE PF01580.13 gi|518652855|ref|YP_008142375.1| - 0.0033 16.9 0.0 0.0062 16.0 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family Zeta_toxin PF06414.7 gi|518652855|ref|YP_008142375.1| - 0.0038 16.3 0.0 0.008 15.2 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin ABC_tran PF00005.22 gi|518652855|ref|YP_008142375.1| - 0.0049 17.1 0.0 0.012 15.8 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_33 PF13671.1 gi|518652855|ref|YP_008142375.1| - 0.0074 16.1 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|518652855|ref|YP_008142375.1| - 0.0083 15.6 0.0 0.031 13.8 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.1 gi|518652855|ref|YP_008142375.1| - 0.01 16.1 0.1 0.072 13.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|518652855|ref|YP_008142375.1| - 0.011 15.3 0.3 0.025 14.1 0.1 1.7 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein Miro PF08477.8 gi|518652855|ref|YP_008142375.1| - 0.012 16.0 0.0 0.031 14.7 0.0 1.7 1 0 0 1 1 1 0 Miro-like protein AAA_30 PF13604.1 gi|518652855|ref|YP_008142375.1| - 0.014 15.0 0.1 0.04 13.4 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_19 PF13245.1 gi|518652855|ref|YP_008142375.1| - 0.022 14.4 0.0 0.058 13.1 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain AAA_22 PF13401.1 gi|518652855|ref|YP_008142375.1| - 0.023 14.8 0.0 0.1 12.7 0.0 2.1 3 0 0 3 3 1 0 AAA domain NTPase_1 PF03266.10 gi|518652855|ref|YP_008142375.1| - 0.026 14.2 0.1 0.21 11.2 0.0 2.4 2 0 0 2 2 2 0 NTPase Thymidylate_kin PF02223.12 gi|518652855|ref|YP_008142375.1| - 0.026 13.8 0.0 0.059 12.7 0.0 1.6 1 0 0 1 1 1 0 Thymidylate kinase DUF815 PF05673.8 gi|518652855|ref|YP_008142375.1| - 0.028 13.3 0.0 0.051 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_16 PF13191.1 gi|518652855|ref|YP_008142375.1| - 0.04 13.9 0.0 0.085 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.17 gi|518652855|ref|YP_008142375.1| - 0.04 13.3 0.2 0.14 11.5 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|518652855|ref|YP_008142375.1| - 0.047 13.1 0.0 0.12 11.8 0.0 1.7 2 0 0 2 2 2 0 AAA-like domain MMR_HSR1 PF01926.18 gi|518652855|ref|YP_008142375.1| - 0.048 13.6 0.0 0.16 11.9 0.0 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.24 gi|518652855|ref|YP_008142375.1| - 0.064 13.4 0.1 0.34 11.1 0.0 2.3 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 gi|518652855|ref|YP_008142375.1| - 0.093 11.9 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Viral_helicase1 PF01443.13 gi|518652855|ref|YP_008142375.1| - 0.11 12.0 0.0 0.3 10.5 0.0 1.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_5 PF07728.9 gi|518652855|ref|YP_008142375.1| - 0.11 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.12 gi|518652855|ref|YP_008142375.1| - 0.11 11.8 0.0 0.25 10.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.1 gi|518652855|ref|YP_008142375.1| - 0.13 12.1 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF302 PF03625.9 gi|518652856|ref|YP_008142376.1| - 1.9e-14 52.9 0.1 2.6e-14 52.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF302 Polysacc_synt PF01943.12 gi|518652857|ref|YP_008142377.1| - 3.7e-12 46.1 31.3 3.7e-12 46.1 21.7 3.5 2 1 0 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|518652857|ref|YP_008142377.1| - 5.5e-12 45.6 25.0 5.5e-12 45.6 17.4 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|518652857|ref|YP_008142377.1| - 7.3e-07 29.0 17.3 7.3e-07 29.0 12.0 4.0 4 1 0 5 5 5 1 Polysaccharide biosynthesis C-terminal domain tRNA_bind PF01588.15 gi|518652858|ref|YP_008142378.1| - 2.4e-28 97.8 0.3 2.7e-28 97.6 0.2 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain BPL_C PF02237.12 gi|518652858|ref|YP_008142378.1| - 0.099 12.3 0.1 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain AAA PF00004.24 gi|518652859|ref|YP_008142379.1| - 1.6e-16 60.6 0.0 3.3e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|518652859|ref|YP_008142379.1| - 5.6e-05 23.0 1.3 0.0001 22.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|518652859|ref|YP_008142379.1| - 0.00012 22.2 0.1 0.0014 18.7 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|518652859|ref|YP_008142379.1| - 0.0003 21.6 0.3 0.0016 19.2 0.2 2.3 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.8 gi|518652859|ref|YP_008142379.1| - 0.0011 17.9 0.0 0.0088 14.9 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_2 PF07724.9 gi|518652859|ref|YP_008142379.1| - 0.0015 18.4 0.0 0.0032 17.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) Alg14 PF08660.6 gi|518652859|ref|YP_008142379.1| - 0.011 15.7 0.1 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like TIP49 PF06068.8 gi|518652859|ref|YP_008142379.1| - 0.021 13.5 0.1 0.058 12.1 0.0 1.6 2 0 0 2 2 2 0 TIP49 C-terminus IPT PF01745.11 gi|518652859|ref|YP_008142379.1| - 0.021 13.9 0.0 0.047 12.8 0.0 1.5 1 0 0 1 1 1 0 Isopentenyl transferase AAA_16 PF13191.1 gi|518652859|ref|YP_008142379.1| - 0.028 14.3 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.9 gi|518652859|ref|YP_008142379.1| - 0.038 13.7 0.0 0.071 12.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Zot PF05707.7 gi|518652859|ref|YP_008142379.1| - 0.045 13.2 0.5 0.15 11.4 0.1 2.2 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_25 PF13481.1 gi|518652859|ref|YP_008142379.1| - 0.045 13.1 0.2 2.6 7.4 0.1 2.2 1 1 1 2 2 2 0 AAA domain DUF258 PF03193.11 gi|518652859|ref|YP_008142379.1| - 0.059 12.5 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 RuvB_N PF05496.7 gi|518652859|ref|YP_008142379.1| - 0.085 11.8 0.0 0.19 10.7 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus Ribosomal_L15e PF00827.12 gi|518652860|ref|YP_008142380.1| - 1.1e-73 246.8 7.8 1.3e-73 246.6 5.4 1.0 1 0 0 1 1 1 1 Ribosomal L15 DUF2874 PF11396.3 gi|518652860|ref|YP_008142380.1| - 0.055 13.4 1.0 0.12 12.3 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2874) Acetyltransf_1 PF00583.19 gi|518652862|ref|YP_008142382.1| - 2.2e-15 56.4 0.0 3.2e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.1 gi|518652862|ref|YP_008142382.1| - 3.1e-09 36.9 0.1 3.7e-09 36.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|518652862|ref|YP_008142382.1| - 1.6e-08 34.5 0.0 2.4e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|518652862|ref|YP_008142382.1| - 1.9e-08 34.4 0.0 2.3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518652862|ref|YP_008142382.1| - 3.8e-08 32.9 0.0 5.6e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|518652862|ref|YP_008142382.1| - 5.9e-06 26.1 0.0 1.3e-05 25.0 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|518652862|ref|YP_008142382.1| - 0.00083 19.2 0.0 0.00097 19.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|518652862|ref|YP_008142382.1| - 0.002 17.9 0.0 0.0033 17.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase MOZ_SAS PF01853.13 gi|518652862|ref|YP_008142382.1| - 0.036 13.2 0.0 0.057 12.6 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family DUF2191 PF09957.4 gi|518652863|ref|YP_008142383.1| - 0.0098 15.6 0.9 0.25 11.1 0.0 2.5 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2191) DUF2992 PF11208.3 gi|518652863|ref|YP_008142383.1| - 0.096 12.5 5.5 0.93 9.3 1.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2992) DUF1342 PF07072.6 gi|518652863|ref|YP_008142383.1| - 0.12 11.9 2.5 0.14 11.7 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1342) Syntaxin PF00804.20 gi|518652863|ref|YP_008142383.1| - 8.5 6.6 14.1 0.96 9.6 3.5 2.6 1 1 1 3 3 3 0 Syntaxin HTH_24 PF13412.1 gi|518652864|ref|YP_008142384.1| - 2e-06 27.0 0.2 5.1e-06 25.7 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|518652864|ref|YP_008142384.1| - 2.6e-06 27.0 0.1 5e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|518652864|ref|YP_008142384.1| - 0.00012 21.6 0.0 0.00018 21.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|518652864|ref|YP_008142384.1| - 0.0029 17.8 0.0 0.0046 17.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Crp PF00325.15 gi|518652864|ref|YP_008142384.1| - 0.0044 16.4 0.0 0.0077 15.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family HTH_IclR PF09339.5 gi|518652864|ref|YP_008142384.1| - 0.0044 16.5 0.0 0.0079 15.7 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.1 gi|518652864|ref|YP_008142384.1| - 0.0061 16.6 1.7 0.19 11.8 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|518652864|ref|YP_008142384.1| - 0.0095 16.0 0.0 0.017 15.2 0.0 1.4 1 0 0 1 1 1 1 Penicillinase repressor TrmB PF01978.14 gi|518652864|ref|YP_008142384.1| - 0.024 14.3 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.1 gi|518652864|ref|YP_008142384.1| - 0.028 14.1 0.1 0.06 13.1 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TFIIE_alpha PF02002.12 gi|518652864|ref|YP_008142384.1| - 0.05 13.1 0.3 0.16 11.5 0.0 1.8 2 0 0 2 2 2 0 TFIIE alpha subunit HTH_34 PF13601.1 gi|518652864|ref|YP_008142384.1| - 0.052 13.5 0.0 0.085 12.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|518652864|ref|YP_008142384.1| - 0.082 12.4 0.1 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_5 PF01022.15 gi|518652864|ref|YP_008142384.1| - 0.093 12.4 0.0 0.21 11.2 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family SHOCT PF09851.4 gi|518652865|ref|YP_008142385.1| - 1.7e-08 33.6 0.5 2.2e-08 33.2 0.4 1.2 1 0 0 1 1 1 1 Short C-terminal domain Yip1 PF04893.12 gi|518652865|ref|YP_008142385.1| - 0.0016 18.0 5.1 0.0019 17.7 3.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF3139 PF11337.3 gi|518652865|ref|YP_008142385.1| - 0.0049 17.1 2.7 1.1 9.5 0.4 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3139) DUF1707 PF08044.6 gi|518652865|ref|YP_008142385.1| - 0.03 14.0 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) DUF2254 PF10011.4 gi|518652865|ref|YP_008142385.1| - 0.054 11.9 2.0 0.072 11.5 1.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2254) Halogen_Hydrol PF10112.4 gi|518652865|ref|YP_008142385.1| - 0.073 12.4 1.1 1.3 8.3 0.0 2.0 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Tic20 PF09685.5 gi|518652865|ref|YP_008142385.1| - 0.11 12.5 3.3 0.15 12.0 2.3 1.1 1 0 0 1 1 1 0 Tic20-like protein ABC2_membrane_4 PF12730.2 gi|518652865|ref|YP_008142385.1| - 0.11 11.6 8.3 0.14 11.2 5.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein MIG-14_Wnt-bd PF06664.7 gi|518652865|ref|YP_008142385.1| - 0.11 11.2 1.5 0.13 11.0 1.0 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF202 PF02656.10 gi|518652865|ref|YP_008142385.1| - 0.24 11.6 4.2 0.32 11.2 2.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF2207 PF09972.4 gi|518652865|ref|YP_008142385.1| - 0.29 9.6 1.2 0.28 9.7 0.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2393 PF09624.5 gi|518652865|ref|YP_008142385.1| - 0.3 10.5 2.1 5.4 6.5 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) DctQ PF04290.7 gi|518652865|ref|YP_008142385.1| - 0.33 10.7 5.4 0.43 10.3 3.7 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF3092 PF11289.3 gi|518652865|ref|YP_008142385.1| - 0.39 9.8 3.0 0.38 9.9 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3092) AAA PF00004.24 gi|518652866|ref|YP_008142386.1| - 1.3e-41 141.8 0.0 2.7e-41 140.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|518652866|ref|YP_008142386.1| - 5.5e-06 26.4 0.0 3.8e-05 23.6 0.0 2.3 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.9 gi|518652866|ref|YP_008142386.1| - 1e-05 25.3 0.0 3.1e-05 23.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|518652866|ref|YP_008142386.1| - 2.8e-05 24.1 0.0 0.00011 22.2 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.1 gi|518652866|ref|YP_008142386.1| - 6.1e-05 22.9 0.0 0.00017 21.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|518652866|ref|YP_008142386.1| - 9.9e-05 21.4 0.0 0.00043 19.4 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|518652866|ref|YP_008142386.1| - 0.00013 22.1 0.1 0.0007 19.7 0.0 2.4 2 1 0 2 2 1 1 AAA domain Bac_DnaA PF00308.13 gi|518652866|ref|YP_008142386.1| - 0.00017 21.3 0.0 0.001 18.7 0.0 2.2 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_17 PF13207.1 gi|518652866|ref|YP_008142386.1| - 0.00017 22.3 0.0 0.00075 20.3 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|518652866|ref|YP_008142386.1| - 0.00043 19.9 0.0 0.00094 18.8 0.0 1.5 1 0 0 1 1 1 1 Part of AAA domain IstB_IS21 PF01695.12 gi|518652866|ref|YP_008142386.1| - 0.00057 19.3 0.0 0.0014 18.0 0.0 1.7 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_3 PF07726.6 gi|518652866|ref|YP_008142386.1| - 0.0015 18.1 0.0 0.0034 17.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.8 gi|518652866|ref|YP_008142386.1| - 0.0018 17.0 0.0 0.0034 16.1 0.0 1.4 1 0 0 1 1 1 1 TIP49 C-terminus ABC_tran PF00005.22 gi|518652866|ref|YP_008142386.1| - 0.0022 18.3 0.0 0.0086 16.3 0.0 1.9 1 1 1 2 2 2 1 ABC transporter AAA_33 PF13671.1 gi|518652866|ref|YP_008142386.1| - 0.0026 17.6 0.0 0.0051 16.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain MIT PF04212.13 gi|518652866|ref|YP_008142386.1| - 0.0028 17.5 2.0 0.0098 15.7 1.4 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain RNA_helicase PF00910.17 gi|518652866|ref|YP_008142386.1| - 0.0038 17.3 0.0 0.013 15.7 0.0 1.9 1 0 0 1 1 1 1 RNA helicase ResIII PF04851.10 gi|518652866|ref|YP_008142386.1| - 0.0044 16.8 0.0 0.0097 15.7 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.21 gi|518652866|ref|YP_008142386.1| - 0.005 16.3 0.0 0.27 10.6 0.0 2.4 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_11 PF13086.1 gi|518652866|ref|YP_008142386.1| - 0.0056 16.2 0.3 0.021 14.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|518652866|ref|YP_008142386.1| - 0.0061 15.6 0.0 0.02 13.9 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_25 PF13481.1 gi|518652866|ref|YP_008142386.1| - 0.0075 15.6 0.0 0.058 12.7 0.0 2.1 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.8 gi|518652866|ref|YP_008142386.1| - 0.0077 15.1 0.0 0.021 13.7 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF815) AAA_24 PF13479.1 gi|518652866|ref|YP_008142386.1| - 0.022 14.3 0.0 0.076 12.5 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_30 PF13604.1 gi|518652866|ref|YP_008142386.1| - 0.023 14.2 0.0 0.054 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain Arch_ATPase PF01637.13 gi|518652866|ref|YP_008142386.1| - 0.023 14.3 6.0 0.18 11.4 0.0 3.0 2 1 1 3 3 3 0 Archaeal ATPase KAP_NTPase PF07693.9 gi|518652866|ref|YP_008142386.1| - 0.031 13.2 0.0 0.067 12.1 0.0 1.6 2 0 0 2 2 2 0 KAP family P-loop domain NACHT PF05729.7 gi|518652866|ref|YP_008142386.1| - 0.034 13.7 0.0 0.39 10.3 0.0 2.1 1 1 1 2 2 2 0 NACHT domain AAA_23 PF13476.1 gi|518652866|ref|YP_008142386.1| - 0.044 14.1 2.5 0.21 11.8 0.0 2.6 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.16 gi|518652866|ref|YP_008142386.1| - 0.049 12.7 0.0 0.11 11.6 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PIF1 PF05970.9 gi|518652866|ref|YP_008142386.1| - 0.057 12.3 0.1 0.18 10.7 0.0 1.8 2 0 0 2 2 2 0 PIF1-like helicase Viral_helicase1 PF01443.13 gi|518652866|ref|YP_008142386.1| - 0.068 12.6 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_28 PF13521.1 gi|518652866|ref|YP_008142386.1| - 0.07 13.0 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain Aminotran_1_2 PF00155.16 gi|518652866|ref|YP_008142386.1| - 0.091 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II NB-ARC PF00931.17 gi|518652866|ref|YP_008142386.1| - 0.094 11.5 0.0 0.2 10.4 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain Parvo_NS1 PF01057.12 gi|518652866|ref|YP_008142386.1| - 0.1 11.4 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 T2SE PF00437.15 gi|518652866|ref|YP_008142386.1| - 0.11 11.3 0.2 0.36 9.6 0.1 1.9 2 1 0 2 2 2 0 Type II/IV secretion system protein Ribosomal_L11 PF00298.14 gi|518652866|ref|YP_008142386.1| - 0.34 11.0 3.8 0.25 11.4 0.9 2.1 2 0 0 2 2 1 0 Ribosomal protein L11, RNA binding domain AAA_21 PF13304.1 gi|518652866|ref|YP_008142386.1| - 9 6.1 10.0 0.57 10.0 0.1 3.1 3 1 1 4 4 4 0 AAA domain DUF3525 PF12039.3 gi|518652868|ref|YP_008142388.1| - 0.072 11.5 0.0 1.7 7.0 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3525) Acetyltransf_4 PF13420.1 gi|518652869|ref|YP_008142389.1| - 2.1e-13 50.5 0.0 2.6e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518652869|ref|YP_008142389.1| - 1.9e-10 40.6 0.0 2.7e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518652869|ref|YP_008142389.1| - 1.5e-07 31.5 0.0 1.9e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|518652869|ref|YP_008142389.1| - 7.1e-05 22.8 0.0 9.8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|518652869|ref|YP_008142389.1| - 0.00014 21.9 0.0 0.00021 21.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|518652869|ref|YP_008142389.1| - 0.088 12.6 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|518652869|ref|YP_008142389.1| - 0.12 12.3 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Peptidase_M20 PF01546.23 gi|518652870|ref|YP_008142390.1| - 7.6e-25 87.5 0.0 9.2e-25 87.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518652870|ref|YP_008142390.1| - 4.8e-19 68.1 0.0 1.2e-18 66.9 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.12 gi|518652870|ref|YP_008142390.1| - 0.0018 18.0 0.0 0.0026 17.5 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.9 gi|518652870|ref|YP_008142390.1| - 0.057 12.1 0.0 0.15 10.8 0.0 1.7 1 1 1 2 2 2 0 M42 glutamyl aminopeptidase MR_MLE_C PF13378.1 gi|518652871|ref|YP_008142391.1| - 3.1e-17 62.5 0.0 5.2e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE PF01188.16 gi|518652871|ref|YP_008142391.1| - 1.9e-08 34.7 0.0 2.9e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MR_MLE_N PF02746.11 gi|518652871|ref|YP_008142391.1| - 4.9e-08 32.9 0.0 1e-07 31.9 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Enolase_C PF00113.17 gi|518652871|ref|YP_008142391.1| - 0.0095 14.9 0.0 0.033 13.1 0.0 1.7 1 1 1 2 2 2 1 Enolase, C-terminal TIM barrel domain MAAL_C PF07476.6 gi|518652871|ref|YP_008142391.1| - 0.049 12.5 0.0 0.085 11.7 0.0 1.3 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus His_biosynth PF00977.16 gi|518652871|ref|YP_008142391.1| - 0.06 12.6 0.0 6.7 5.9 0.0 2.2 1 1 1 2 2 2 0 Histidine biosynthesis protein DuoxA PF10204.4 gi|518652871|ref|YP_008142391.1| - 0.16 10.9 0.0 0.3 10.1 0.0 1.4 1 0 0 1 1 1 0 Dual oxidase maturation factor Glyco_hydro_15 PF00723.16 gi|518652872|ref|YP_008142392.1| - 8.6e-47 159.6 0.0 2.9e-45 154.6 0.0 2.0 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Glyco_transf_20 PF00982.16 gi|518652873|ref|YP_008142393.1| - 7e-99 331.4 4.0 1.2e-98 330.6 2.8 1.4 1 1 0 1 1 1 1 Glycosyltransferase family 20 Glycos_transf_1 PF00534.15 gi|518652873|ref|YP_008142393.1| - 0.00016 21.1 1.2 0.48 9.8 0.1 2.4 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518652873|ref|YP_008142393.1| - 0.082 13.0 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 DisA_N PF02457.11 gi|518652873|ref|YP_008142393.1| - 0.12 11.5 0.0 2.8 7.1 0.0 2.3 1 1 1 2 2 2 0 DisA bacterial checkpoint controller nucleotide-binding Trehalose_PPase PF02358.11 gi|518652874|ref|YP_008142394.1| - 1.5e-20 73.1 0.0 1.8e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.7 gi|518652874|ref|YP_008142394.1| - 5.1e-06 26.2 1.4 9.4e-05 22.1 0.3 2.2 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|518652874|ref|YP_008142394.1| - 0.15 11.3 0.0 0.38 10.0 0.0 1.7 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase RmlD_sub_bind PF04321.12 gi|518652875|ref|YP_008142395.1| - 1.1e-11 44.1 0.0 1.5e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain MFS_1 PF07690.11 gi|518652876|ref|YP_008142396.1| - 1.5e-24 86.4 49.9 1.8e-14 53.2 16.9 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily E1-E2_ATPase PF00122.15 gi|518652877|ref|YP_008142397.1| - 1.3e-60 204.3 5.2 1.3e-60 204.3 3.6 2.9 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|518652877|ref|YP_008142397.1| - 2.2e-33 116.5 0.0 3.3e-33 115.9 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|518652877|ref|YP_008142397.1| - 5.5e-16 59.2 0.0 1.5e-15 57.9 0.0 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|518652877|ref|YP_008142397.1| - 6.9e-14 51.0 0.0 2.8e-13 49.1 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.7 gi|518652877|ref|YP_008142397.1| - 1.1e-05 25.1 0.7 0.00011 21.8 0.1 2.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|518652877|ref|YP_008142397.1| - 0.0091 15.9 0.0 0.08 12.9 0.0 2.4 2 0 0 2 2 2 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Isochorismatase PF00857.15 gi|518652878|ref|YP_008142398.1| - 2.8e-40 138.0 0.0 3.2e-40 137.9 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DUF4262 PF14081.1 gi|518652878|ref|YP_008142398.1| - 0.07 13.2 0.0 0.16 12.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4262) GMP_synt_C PF00958.17 gi|518652878|ref|YP_008142398.1| - 0.12 12.1 0.1 0.15 11.7 0.1 1.4 1 1 0 1 1 1 0 GMP synthase C terminal domain Rho_N PF07498.7 gi|518652879|ref|YP_008142399.1| - 0.11 12.3 3.8 0.14 11.9 1.3 2.2 2 0 0 2 2 2 0 Rho termination factor, N-terminal domain tRNA-synt_His PF13393.1 gi|518652879|ref|YP_008142399.1| - 0.15 11.1 0.2 0.21 10.6 0.1 1.4 1 1 0 1 1 1 0 Histidyl-tRNA synthetase CbiA PF01656.18 gi|518652880|ref|YP_008142400.1| - 1.1e-29 103.2 0.1 1.4e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|518652880|ref|YP_008142400.1| - 7.7e-07 29.1 0.3 5.7e-06 26.3 0.2 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|518652880|ref|YP_008142400.1| - 7.3e-06 25.2 0.1 0.0045 16.1 0.0 2.2 1 1 0 2 2 2 2 ATPase MipZ Fer4_NifH PF00142.13 gi|518652880|ref|YP_008142400.1| - 7.9e-06 25.2 0.1 3e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|518652880|ref|YP_008142400.1| - 1.2e-05 24.5 0.0 0.00021 20.4 0.0 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase YhjQ PF06564.7 gi|518652880|ref|YP_008142400.1| - 0.076 12.3 0.0 2.4 7.4 0.0 2.1 2 0 0 2 2 2 0 YhjQ protein ParA PF10609.4 gi|518652880|ref|YP_008142400.1| - 0.13 12.1 0.2 0.58 10.0 0.0 2.2 2 0 0 2 2 2 0 ParA/MinD ATPase like SRP54 PF00448.17 gi|518652880|ref|YP_008142400.1| - 0.15 11.5 0.0 6.2 6.2 0.0 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DEDD_Tnp_IS110 PF01548.12 gi|518652881|ref|YP_008142401.1| - 2.1e-26 92.3 0.0 4.1e-26 91.3 0.0 1.5 2 0 0 2 2 2 1 Transposase Transposase_20 PF02371.11 gi|518652881|ref|YP_008142401.1| - 3.2e-22 78.4 0.0 5.3e-22 77.7 0.0 1.4 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family Ribosomal_S13 PF00416.17 gi|518652881|ref|YP_008142401.1| - 9 6.8 8.6 9.4 6.7 1.7 2.9 1 1 1 3 3 3 0 Ribosomal protein S13/S18 adh_short_C2 PF13561.1 gi|518652882|ref|YP_008142402.1| - 3.6e-29 102.2 0.0 4.1e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.20 gi|518652882|ref|YP_008142402.1| - 5.4e-16 58.9 0.0 6.9e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|518652882|ref|YP_008142402.1| - 1.7e-06 27.8 0.0 2.5e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 KR domain PsbR PF04725.7 gi|518652882|ref|YP_008142402.1| - 0.0082 16.1 0.0 0.019 14.9 0.0 1.7 2 0 0 2 2 2 1 Photosystem II 10 kDa polypeptide PsbR Saccharop_dh PF03435.13 gi|518652882|ref|YP_008142402.1| - 0.021 13.7 0.1 0.032 13.2 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase F420_oxidored PF03807.12 gi|518652882|ref|YP_008142402.1| - 0.032 14.6 0.1 0.062 13.7 0.1 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|518652882|ref|YP_008142402.1| - 0.065 12.8 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACT PF01842.20 gi|518652882|ref|YP_008142402.1| - 0.067 12.6 0.1 7.3 6.1 0.0 2.8 2 0 0 2 2 2 0 ACT domain Cupin_2 PF07883.6 gi|518652883|ref|YP_008142403.1| - 3e-13 49.0 0.0 3.8e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|518652883|ref|YP_008142403.1| - 8.3e-08 32.0 0.0 1.1e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.7 gi|518652883|ref|YP_008142403.1| - 0.00011 21.7 0.2 0.0003 20.3 0.0 1.5 1 1 0 2 2 2 1 Ethanolamine utilisation protein EutQ ARD PF03079.9 gi|518652883|ref|YP_008142403.1| - 0.00045 20.2 0.2 0.00061 19.7 0.1 1.2 1 0 0 1 1 1 1 ARD/ARD' family Cupin_3 PF05899.7 gi|518652883|ref|YP_008142403.1| - 0.0053 16.1 0.0 0.0084 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.17 gi|518652883|ref|YP_008142403.1| - 0.011 15.2 0.0 0.017 14.5 0.0 1.3 1 1 0 1 1 1 0 Cupin Pirin PF02678.11 gi|518652883|ref|YP_008142403.1| - 0.015 15.1 0.1 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Pirin SsgA PF04686.7 gi|518652883|ref|YP_008142403.1| - 0.029 14.0 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA zinc_ribbon_5 PF13719.1 gi|518652884|ref|YP_008142404.1| - 2.1e-05 23.9 1.1 0.043 13.3 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518652884|ref|YP_008142404.1| - 3.6e-05 23.3 1.3 0.056 13.1 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|518652884|ref|YP_008142404.1| - 0.0036 16.5 1.0 0.0051 16.0 0.7 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding zf-C2H2_3 PF13878.1 gi|518652884|ref|YP_008142404.1| - 0.0042 16.6 2.8 0.037 13.6 0.0 2.1 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO PHD PF00628.24 gi|518652884|ref|YP_008142404.1| - 0.0094 15.6 0.2 0.0094 15.6 0.2 1.2 1 0 0 1 1 1 1 PHD-finger DUF3133 PF11331.3 gi|518652884|ref|YP_008142404.1| - 0.013 15.0 0.5 0.019 14.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3133) Prok-RING_1 PF14446.1 gi|518652884|ref|YP_008142404.1| - 0.016 14.9 1.3 0.028 14.1 0.9 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 DNA_RNApol_7kD PF03604.8 gi|518652884|ref|YP_008142404.1| - 0.031 13.7 3.0 3.1 7.3 0.0 2.7 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit ADK_lid PF05191.9 gi|518652884|ref|YP_008142404.1| - 0.042 13.5 0.9 2.7 7.7 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid OrfB_Zn_ribbon PF07282.6 gi|518652884|ref|YP_008142404.1| - 0.043 13.4 0.2 0.055 13.1 0.1 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2HC_2 PF13913.1 gi|518652884|ref|YP_008142404.1| - 0.048 13.3 1.6 1.5 8.5 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of a C2HC-type HypA PF01155.14 gi|518652884|ref|YP_008142404.1| - 0.07 12.8 0.3 0.076 12.7 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DUF2318 PF10080.4 gi|518652884|ref|YP_008142404.1| - 0.078 12.7 1.0 0.13 12.0 0.7 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-PHD-like PF15446.1 gi|518652884|ref|YP_008142404.1| - 0.081 12.2 0.1 0.081 12.2 0.0 1.1 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain Lar_restr_allev PF14354.1 gi|518652884|ref|YP_008142404.1| - 0.082 13.2 0.8 0.12 12.6 0.6 1.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar Elf1 PF05129.8 gi|518652884|ref|YP_008142404.1| - 0.09 12.4 1.2 0.27 10.9 0.9 1.7 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.1 gi|518652884|ref|YP_008142404.1| - 0.095 11.9 4.4 0.64 9.3 3.1 2.0 1 1 0 1 1 1 0 zinc-ribbon domain FeS PF04060.8 gi|518652884|ref|YP_008142404.1| - 0.11 12.1 2.5 5 6.7 0.0 2.2 2 0 0 2 2 2 0 Putative Fe-S cluster Rubredoxin PF00301.15 gi|518652884|ref|YP_008142404.1| - 0.12 12.2 0.4 5.6 6.9 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin C1_1 PF00130.17 gi|518652884|ref|YP_008142404.1| - 0.13 12.0 0.3 0.18 11.5 0.2 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_6 PF13912.1 gi|518652884|ref|YP_008142404.1| - 0.16 11.9 1.1 3.5 7.6 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Desulfoferrod_N PF06397.7 gi|518652884|ref|YP_008142404.1| - 0.68 9.3 4.1 1.6 8.2 2.9 1.6 1 1 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain zinc_ribbon_2 PF13240.1 gi|518652884|ref|YP_008142404.1| - 1.3 8.6 4.3 14 5.3 2.9 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Semialdhyde_dh PF01118.19 gi|518652885|ref|YP_008142405.1| - 6.8e-37 126.4 0.0 1.3e-36 125.5 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|518652885|ref|YP_008142405.1| - 8e-11 42.1 0.0 1.2e-10 41.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|518652885|ref|YP_008142405.1| - 0.0026 18.2 0.0 0.0045 17.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.15 gi|518652885|ref|YP_008142405.1| - 0.0029 17.5 0.0 0.0062 16.4 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Saccharop_dh PF03435.13 gi|518652885|ref|YP_008142405.1| - 0.0033 16.4 0.0 0.0037 16.3 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 gi|518652885|ref|YP_008142405.1| - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 NADH(P)-binding AA_kinase PF00696.23 gi|518652886|ref|YP_008142406.1| - 3.4e-25 89.0 0.7 4.3e-25 88.6 0.5 1.1 1 0 0 1 1 1 1 Amino acid kinase family Aminotran_3 PF00202.16 gi|518652887|ref|YP_008142407.1| - 1e-89 300.7 0.1 1.2e-89 300.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III RimK PF08443.6 gi|518652888|ref|YP_008142408.1| - 1.3e-42 145.4 0.0 1.7e-42 145.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|518652888|ref|YP_008142408.1| - 1.1e-13 50.6 0.0 2e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.9 gi|518652888|ref|YP_008142408.1| - 0.00011 22.0 0.0 0.00028 20.7 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|518652888|ref|YP_008142408.1| - 0.00014 21.6 0.0 0.00025 20.8 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp domain DUF4343 PF14243.1 gi|518652888|ref|YP_008142408.1| - 0.015 15.1 0.0 0.031 14.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4343) ATPgrasp_Ter PF15632.1 gi|518652888|ref|YP_008142408.1| - 0.034 12.8 0.0 0.33 9.6 0.0 2.0 1 1 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon Peptidase_M20 PF01546.23 gi|518652889|ref|YP_008142409.1| - 1.2e-20 73.8 0.0 1.6e-20 73.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518652889|ref|YP_008142409.1| - 4e-11 42.6 0.0 7.3e-11 41.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain 3HCDH_N PF02737.13 gi|518652891|ref|YP_008142411.1| - 5.9e-56 188.9 0.8 1.3e-55 187.8 0.5 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH PF00378.15 gi|518652891|ref|YP_008142411.1| - 1.2e-50 171.9 0.0 1.9e-50 171.2 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase family 3HCDH PF00725.17 gi|518652891|ref|YP_008142411.1| - 5e-30 103.7 0.0 2.3e-20 72.7 0.0 2.6 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|518652891|ref|YP_008142411.1| - 5.7e-06 26.1 0.6 2.2e-05 24.2 0.4 2.0 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|518652891|ref|YP_008142411.1| - 6.6e-05 22.8 0.9 0.00027 20.8 0.6 2.0 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|518652891|ref|YP_008142411.1| - 0.0091 15.4 2.7 0.012 15.0 0.8 2.1 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.12 gi|518652891|ref|YP_008142411.1| - 0.027 14.9 1.3 0.13 12.6 0.9 2.3 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent HTH_19 PF12844.2 gi|518652891|ref|YP_008142411.1| - 0.058 13.4 1.1 1.8 8.7 0.0 3.6 4 0 0 4 4 4 0 Helix-turn-helix domain 2-Hacid_dh_C PF02826.14 gi|518652891|ref|YP_008142411.1| - 0.11 11.6 0.1 0.23 10.6 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|518652891|ref|YP_008142411.1| - 2.1 7.9 5.1 1 8.8 0.1 2.7 4 0 0 4 4 4 0 Alanine dehydrogenase/PNT, C-terminal domain AMP-binding PF00501.23 gi|518652892|ref|YP_008142412.1| - 8.8e-75 251.6 0.3 1.2e-74 251.1 0.0 1.3 2 0 0 2 2 2 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518652892|ref|YP_008142412.1| - 1.6e-12 48.2 0.0 3.6e-12 47.0 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ubiquitin PF00240.18 gi|518652892|ref|YP_008142412.1| - 9.5e-05 21.7 0.4 0.0031 16.8 0.0 2.8 3 0 0 3 3 3 1 Ubiquitin family Thiolase_N PF00108.18 gi|518652893|ref|YP_008142413.1| - 3.9e-64 216.1 0.0 1.2e-63 214.6 0.0 1.7 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.13 gi|518652893|ref|YP_008142413.1| - 5.9e-45 151.6 0.1 1.2e-44 150.6 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.21 gi|518652893|ref|YP_008142413.1| - 0.0027 17.2 1.0 0.006 16.0 0.3 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.6 gi|518652893|ref|YP_008142413.1| - 0.064 11.7 0.0 0.23 9.8 0.0 1.8 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) Acyl-CoA_dh_1 PF00441.19 gi|518652894|ref|YP_008142414.1| - 1.4e-31 109.6 0.1 2e-31 109.1 0.1 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.14 gi|518652894|ref|YP_008142414.1| - 1.3e-21 75.7 0.1 2.6e-21 74.8 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.11 gi|518652894|ref|YP_008142414.1| - 3.2e-09 37.3 0.0 2.4e-08 34.5 0.0 2.2 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|518652894|ref|YP_008142414.1| - 6.5e-08 32.8 0.0 1.8e-07 31.4 0.0 1.8 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.19 gi|518652895|ref|YP_008142415.1| - 6.6e-12 45.7 0.0 6.2e-10 39.3 0.0 2.3 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|518652895|ref|YP_008142415.1| - 1.9e-11 44.5 0.0 9.1e-11 42.3 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|518652895|ref|YP_008142415.1| - 8e-07 29.3 0.0 0.0093 16.2 0.0 2.3 1 1 1 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain KdpC PF02669.10 gi|518652896|ref|YP_008142416.1| - 3e-27 95.5 2.3 6.6e-17 61.8 0.3 2.0 1 1 1 2 2 2 2 K+-transporting ATPase, c chain E1-E2_ATPase PF00122.15 gi|518652897|ref|YP_008142417.1| - 3.1e-39 134.3 5.3 3.1e-39 134.3 3.7 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|518652897|ref|YP_008142417.1| - 1.5e-31 110.5 0.4 3.7e-31 109.2 0.2 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|518652897|ref|YP_008142417.1| - 2.8e-12 47.2 0.0 5.8e-12 46.1 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|518652897|ref|YP_008142417.1| - 2.5e-05 24.0 2.7 0.00029 20.5 0.7 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase KdpA PF03814.10 gi|518652898|ref|YP_008142418.1| - 1.9e-174 580.7 33.8 7e-174 578.8 23.4 1.7 1 1 0 1 1 1 1 Potassium-transporting ATPase A subunit AsnC_trans_reg PF01037.16 gi|518652900|ref|YP_008142420.1| - 6.2e-17 61.0 1.0 7.2e-17 60.8 0.7 1.1 1 0 0 1 1 1 1 AsnC family Memo PF01875.12 gi|518652902|ref|YP_008142422.1| - 5.8e-61 205.7 0.1 6.7e-61 205.5 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein DUF4325 PF14213.1 gi|518652903|ref|YP_008142423.1| - 0.008 15.8 0.6 0.011 15.3 0.3 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4325) Uso1_p115_head PF04869.9 gi|518652903|ref|YP_008142423.1| - 0.019 13.7 0.2 0.13 10.9 0.1 1.8 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, head region CN_hydrolase PF00795.17 gi|518652904|ref|YP_008142424.1| - 3.7e-26 91.6 0.0 5.2e-26 91.1 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase VitK2_biosynth PF02621.9 gi|518652905|ref|YP_008142425.1| - 1.2e-43 149.1 0.1 1.4e-43 148.9 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis REGB_T4 PF10715.4 gi|518652905|ref|YP_008142425.1| - 0.072 13.2 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 Endoribonuclease RegB T4-bacteriophage encoded DUF3246 PF11596.3 gi|518652906|ref|YP_008142426.1| - 0.015 14.5 0.0 0.018 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) SMP_2 PF10144.4 gi|518652906|ref|YP_008142426.1| - 0.03 13.4 0.1 0.032 13.3 0.1 1.0 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin Kelch_6 PF13964.1 gi|518652906|ref|YP_008142426.1| - 0.16 12.1 1.2 0.3 11.3 0.5 1.7 2 0 0 2 2 2 0 Kelch motif Sigma_reg_N PF13800.1 gi|518652906|ref|YP_008142426.1| - 0.45 10.5 2.1 0.62 10.1 0.6 1.7 1 1 1 2 2 2 0 Sigma factor regulator N-terminal Radical_SAM PF04055.16 gi|518652909|ref|YP_008142429.1| - 7.4e-06 26.2 0.0 1.1e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily PDH PF02153.12 gi|518652910|ref|YP_008142430.1| - 4.6e-10 38.8 0.0 1.4e-09 37.2 0.0 1.7 1 1 0 1 1 1 1 Prephenate dehydrogenase DUF4071 PF13281.1 gi|518652910|ref|YP_008142430.1| - 0.064 12.0 0.5 0.094 11.5 0.1 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4071) LAGLIDADG_1 PF00961.14 gi|518652910|ref|YP_008142430.1| - 4 8.0 6.8 21 5.7 0.3 2.6 2 1 1 3 3 3 0 LAGLIDADG endonuclease CM_2 PF01817.16 gi|518652911|ref|YP_008142431.1| - 4.2e-08 33.1 0.2 9.2e-08 32.0 0.1 1.6 1 0 0 1 1 1 1 Chorismate mutase type II AIRS PF00586.19 gi|518652912|ref|YP_008142432.1| - 2.7e-16 59.6 0.0 1.1e-15 57.6 0.0 1.9 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|518652912|ref|YP_008142432.1| - 1.1e-06 28.7 0.0 1.8e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain GrpE PF01025.14 gi|518652913|ref|YP_008142433.1| - 1.1e-32 112.9 4.4 3e-32 111.4 3.1 1.7 1 1 0 1 1 1 1 GrpE DUF3496 PF12001.3 gi|518652913|ref|YP_008142433.1| - 1.4 9.1 9.8 45 4.3 6.8 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3496) HSP70 PF00012.15 gi|518652914|ref|YP_008142434.1| - 5.3e-217 721.5 14.2 2.2e-197 656.6 9.3 2.1 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|518652914|ref|YP_008142434.1| - 2.2e-15 56.0 9.1 3.7e-15 55.3 0.1 3.1 3 1 0 3 3 3 1 MreB/Mbl protein ZYG-11_interact PF05884.7 gi|518652914|ref|YP_008142434.1| - 0.047 12.7 4.4 0.074 12.1 0.0 2.4 2 1 0 2 2 2 0 Interactor of ZYG-11 PXA PF02194.10 gi|518652914|ref|YP_008142434.1| - 0.18 11.3 2.1 0.33 10.5 1.5 1.4 1 0 0 1 1 1 0 PXA domain FtsA PF14450.1 gi|518652914|ref|YP_008142434.1| - 0.72 9.6 10.3 4 7.3 0.0 4.5 4 1 0 4 4 4 0 Cell division protein FtsA DnaJ PF00226.26 gi|518652915|ref|YP_008142435.1| - 1.1e-28 98.7 2.2 1.8e-28 98.0 1.5 1.3 1 0 0 1 1 1 1 DnaJ domain CTDII PF01556.13 gi|518652915|ref|YP_008142435.1| - 2.8e-27 94.4 0.5 1.1e-20 73.2 0.0 3.5 3 1 0 3 3 3 3 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.14 gi|518652915|ref|YP_008142435.1| - 1.1e-12 47.7 13.7 1.8e-12 47.1 9.5 1.3 1 0 0 1 1 1 1 DnaJ central domain RRM_3 PF08777.6 gi|518652915|ref|YP_008142435.1| - 0.057 13.2 0.1 0.097 12.5 0.1 1.3 1 0 0 1 1 1 0 RNA binding motif DUF1356 PF07092.7 gi|518652915|ref|YP_008142435.1| - 0.06 12.5 14.6 1.8 7.7 0.2 3.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1356) HypA PF01155.14 gi|518652915|ref|YP_008142435.1| - 8.8 6.0 8.6 1.1 9.0 0.7 2.2 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family SOR PF07682.6 gi|518652916|ref|YP_008142436.1| - 3.3e-127 423.2 0.9 3.7e-127 423.0 0.6 1.0 1 0 0 1 1 1 1 Sulphur oxygenase reductase ABM PF03992.11 gi|518652916|ref|YP_008142436.1| - 7.3e-06 25.9 0.0 0.027 14.4 0.0 2.7 2 1 0 2 2 2 2 Antibiotic biosynthesis monooxygenase DUF3291 PF11695.3 gi|518652916|ref|YP_008142436.1| - 0.079 12.3 0.1 5.2 6.4 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3291) HTH_24 PF13412.1 gi|518652917|ref|YP_008142437.1| - 1.1e-11 43.8 0.9 2.9e-11 42.5 0.6 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518652917|ref|YP_008142437.1| - 8.8e-10 37.9 0.1 1.7e-09 37.0 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.16 gi|518652917|ref|YP_008142437.1| - 6.4e-07 28.9 0.4 1.2e-06 28.1 0.3 1.4 1 0 0 1 1 1 1 AsnC family HTH_20 PF12840.2 gi|518652917|ref|YP_008142437.1| - 0.029 14.1 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|518652917|ref|YP_008142437.1| - 0.033 14.4 0.0 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR PF01047.17 gi|518652917|ref|YP_008142437.1| - 0.055 13.1 0.1 0.19 11.4 0.0 1.9 2 0 0 2 2 2 0 MarR family MarR_2 PF12802.2 gi|518652917|ref|YP_008142437.1| - 0.07 12.8 0.0 0.56 9.9 0.0 2.0 2 0 0 2 2 2 0 MarR family Aminotran_3 PF00202.16 gi|518652918|ref|YP_008142438.1| - 4.1e-78 262.5 0.0 4.9e-78 262.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III AA_permease PF00324.16 gi|518652919|ref|YP_008142439.1| - 2.6e-31 108.4 51.8 3.4e-31 108.1 35.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518652919|ref|YP_008142439.1| - 1.3e-28 99.6 58.8 1.7e-28 99.3 40.8 1.1 1 0 0 1 1 1 1 Amino acid permease CcmD PF04995.9 gi|518652919|ref|YP_008142439.1| - 9.9 5.9 9.2 9.6 6.0 0.1 3.9 3 0 0 3 3 3 0 Heme exporter protein D (CcmD) Amidase PF01425.16 gi|518652920|ref|YP_008142440.1| - 1.8e-85 287.4 0.0 3e-85 286.7 0.0 1.4 1 0 0 1 1 1 1 Amidase Phage_RpbA PF10789.4 gi|518652920|ref|YP_008142440.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA Aldedh PF00171.17 gi|518652921|ref|YP_008142441.1| - 2.1e-154 514.3 0.0 2.4e-154 514.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|518652921|ref|YP_008142441.1| - 9.2e-08 31.2 0.0 1.6e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.6 gi|518652921|ref|YP_008142441.1| - 0.0038 16.4 0.0 0.028 13.6 0.0 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1487) SCP2 PF02036.12 gi|518652922|ref|YP_008142442.1| - 3.5e-16 59.3 0.0 4e-16 59.1 0.0 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family TPP_enzyme_N PF02776.13 gi|518652923|ref|YP_008142443.1| - 7.8e-37 126.3 0.0 2.2e-34 118.4 0.0 2.2 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518652923|ref|YP_008142443.1| - 5.8e-22 77.9 0.1 5e-21 74.8 0.0 2.5 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|518652923|ref|YP_008142443.1| - 9.3e-12 44.8 0.0 1.9e-11 43.8 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DUF4217 PF13959.1 gi|518652923|ref|YP_008142443.1| - 0.11 12.0 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) 2-Hacid_dh_C PF02826.14 gi|518652924|ref|YP_008142444.1| - 4.5e-55 185.5 0.0 6.2e-55 185.0 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|518652924|ref|YP_008142444.1| - 3.8e-23 81.4 0.0 4.6e-23 81.1 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.10 gi|518652924|ref|YP_008142444.1| - 1e-05 25.4 0.0 2e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase PTS_IIB PF02302.12 gi|518652924|ref|YP_008142444.1| - 0.0062 16.9 0.2 0.13 12.7 0.1 2.4 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit UDPG_MGDP_dh_C PF03720.10 gi|518652924|ref|YP_008142444.1| - 0.008 16.3 0.0 0.18 11.9 0.0 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IlvN PF07991.7 gi|518652924|ref|YP_008142444.1| - 0.088 12.1 0.0 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Transposase_mut PF00872.13 gi|518652925|ref|YP_008142445.1| - 6.2e-88 294.9 0.0 8.5e-88 294.4 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518652925|ref|YP_008142445.1| - 6.6e-10 39.0 0.0 1.5e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.1 gi|518652925|ref|YP_008142445.1| - 0.0051 16.7 0.1 3.8 7.4 0.1 2.4 2 0 0 2 2 2 2 DDE domain DUF445 PF04286.7 gi|518652925|ref|YP_008142445.1| - 0.089 12.3 0.1 0.22 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF445) DEDD_Tnp_IS110 PF01548.12 gi|518652926|ref|YP_008142446.1| - 7.4e-21 74.3 0.0 1.1e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.11 gi|518652926|ref|YP_008142446.1| - 2.6e-14 53.1 0.0 5.1e-14 52.1 0.0 1.5 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DUF2072 PF09845.4 gi|518652926|ref|YP_008142446.1| - 0.0049 16.7 1.3 2.4 8.1 0.1 2.4 2 0 0 2 2 2 2 Zn-ribbon containing protein (DUF2072) SecIII_SopE_N PF05364.9 gi|518652926|ref|YP_008142446.1| - 0.074 12.8 0.7 3.6 7.5 0.0 3.0 3 0 0 3 3 3 0 Salmonella type III secretion SopE effector N-terminus OrfB_Zn_ribbon PF07282.6 gi|518652927|ref|YP_008142447.1| - 7.8e-27 92.7 0.9 1.8e-26 91.5 0.2 2.0 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518652927|ref|YP_008142447.1| - 3.8e-09 36.2 5.4 5.4e-09 35.7 3.8 1.2 1 0 0 1 1 1 1 Probable transposase OmpH PF03938.9 gi|518652927|ref|YP_008142447.1| - 0.013 15.4 1.3 0.024 14.5 0.9 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) HypA PF01155.14 gi|518652927|ref|YP_008142447.1| - 0.029 14.0 0.9 0.19 11.4 0.2 2.2 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family zf-ribbon_3 PF13248.1 gi|518652927|ref|YP_008142447.1| - 0.32 10.2 5.0 2.2 7.6 3.2 2.1 1 1 1 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|518652927|ref|YP_008142447.1| - 2.1 8.1 4.5 5.9 6.6 0.4 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_4 PF13717.1 gi|518652927|ref|YP_008142447.1| - 3.3 7.4 5.2 2.5 7.8 0.3 2.7 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|518652927|ref|YP_008142447.1| - 3.3 7.3 5.3 2.1 8.0 0.3 2.6 1 1 1 2 2 2 0 zinc-ribbon domain Y1_Tnp PF01797.11 gi|518652928|ref|YP_008142448.1| - 5.2e-39 132.8 0.8 6e-39 132.6 0.5 1.0 1 0 0 1 1 1 1 Transposase IS200 like DDE_Tnp_1 PF01609.16 gi|518652929|ref|YP_008142449.1| - 4.7e-15 55.6 0.0 9.9e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain ANF_receptor PF01094.23 gi|518652929|ref|YP_008142449.1| - 0.012 14.4 0.0 0.02 13.6 0.0 1.3 1 0 0 1 1 1 0 Receptor family ligand binding region DDE_Tnp_1_3 PF13612.1 gi|518652929|ref|YP_008142449.1| - 0.13 12.0 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Transposase DDE domain DDE_5 PF13546.1 gi|518652929|ref|YP_008142449.1| - 0.14 11.0 0.0 0.21 10.3 0.0 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease HEAT_2 PF13646.1 gi|518652930|ref|YP_008142450.1| - 0.078 13.2 0.0 0.45 10.8 0.0 2.2 1 1 0 1 1 1 0 HEAT repeats DNA_primase_S PF01896.14 gi|518652931|ref|YP_008142451.1| - 1.4e-20 73.6 0.5 4.9e-20 71.8 0.3 1.9 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase small subunit Gp_dh_C PF02800.15 gi|518652932|ref|YP_008142452.1| - 3.5e-21 75.3 0.3 4.7e-21 74.8 0.2 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|518652932|ref|YP_008142452.1| - 3.7e-19 69.1 0.8 1.1e-18 67.6 0.1 2.1 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|518652932|ref|YP_008142452.1| - 2.7e-08 33.7 0.0 6.3e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.14 gi|518652932|ref|YP_008142452.1| - 0.0085 15.2 0.4 0.48 9.5 0.2 2.3 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|518652932|ref|YP_008142452.1| - 0.11 12.9 0.1 1.6 9.1 0.0 2.7 3 0 0 3 3 3 0 Homoserine dehydrogenase, NAD binding domain DrsE PF02635.10 gi|518652932|ref|YP_008142452.1| - 0.13 12.3 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 DsrE/DsrF-like family Rad51 PF08423.6 gi|518652933|ref|YP_008142453.1| - 2.9e-85 285.2 0.0 3.5e-85 284.9 0.0 1.1 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.1 gi|518652933|ref|YP_008142453.1| - 3e-11 43.1 0.0 4.7e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH_5 PF14520.1 gi|518652933|ref|YP_008142453.1| - 1e-10 41.5 2.2 2.2e-10 40.5 1.5 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain RecA PF00154.16 gi|518652933|ref|YP_008142453.1| - 1.3e-10 40.9 0.1 2.1e-10 40.2 0.1 1.3 1 1 0 1 1 1 1 recA bacterial DNA recombination protein KaiC PF06745.8 gi|518652933|ref|YP_008142453.1| - 1.5e-08 34.0 0.1 2.6e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 KaiC HHH PF00633.18 gi|518652933|ref|YP_008142453.1| - 2.5e-05 23.7 0.2 0.0079 15.8 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|518652933|ref|YP_008142453.1| - 0.00012 21.8 0.4 0.00047 19.9 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif Cdd1 PF11731.3 gi|518652933|ref|YP_008142453.1| - 0.0024 17.7 0.0 0.0046 16.8 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.3 gi|518652933|ref|YP_008142453.1| - 0.0031 17.4 0.0 0.013 15.4 0.0 2.1 2 0 0 2 2 2 1 IMS family HHH motif AAA_22 PF13401.1 gi|518652933|ref|YP_008142453.1| - 0.037 14.1 0.0 0.077 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain HHH_8 PF14716.1 gi|518652933|ref|YP_008142453.1| - 0.037 14.2 0.8 0.17 12.1 0.1 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix domain AAA_10 PF12846.2 gi|518652933|ref|YP_008142453.1| - 0.075 12.4 0.0 0.13 11.6 0.0 1.5 1 1 0 1 1 1 0 AAA-like domain ScpA_ScpB PF02616.9 gi|518652934|ref|YP_008142454.1| - 6.9e-05 22.5 0.5 0.0059 16.2 0.3 2.6 1 1 0 1 1 1 1 ScpA/B protein SMC_N PF02463.14 gi|518652935|ref|YP_008142455.1| - 1.8e-32 112.3 80.0 1.3e-31 109.6 55.5 2.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.8 gi|518652935|ref|YP_008142455.1| - 1.3e-29 102.6 0.0 5.6e-29 100.5 0.0 2.2 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.1 gi|518652935|ref|YP_008142455.1| - 1.5e-13 51.5 23.3 1.5e-13 51.5 16.2 6.5 2 2 1 3 3 1 1 AAA domain Reo_sigmaC PF04582.7 gi|518652935|ref|YP_008142455.1| - 1.5e-08 34.2 27.9 0.0019 17.4 0.6 5.4 3 2 1 5 5 5 4 Reovirus sigma C capsid protein AAA_21 PF13304.1 gi|518652935|ref|YP_008142455.1| - 1.3e-07 31.9 35.5 6.8e-06 26.2 9.1 5.4 2 2 2 4 4 2 2 AAA domain AAA_29 PF13555.1 gi|518652935|ref|YP_008142455.1| - 1.8e-06 27.3 0.0 4.3e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Myosin_tail_1 PF01576.14 gi|518652935|ref|YP_008142455.1| - 1.8e-05 22.7 114.3 2.2e-05 22.4 39.0 3.7 2 1 0 2 2 2 1 Myosin tail AAA_13 PF13166.1 gi|518652935|ref|YP_008142455.1| - 0.029 12.8 131.1 0.14 10.5 10.7 5.4 2 2 1 5 5 5 0 AAA domain DUF3584 PF12128.3 gi|518652935|ref|YP_008142455.1| - 0.46 7.7 82.9 0.044 11.1 21.7 3.8 2 2 1 3 3 3 0 Protein of unknown function (DUF3584) CENP-F_leu_zip PF10473.4 gi|518652935|ref|YP_008142455.1| - 4.1 7.2 111.1 0.42 10.4 8.5 7.6 2 2 5 7 7 7 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Filament PF00038.16 gi|518652935|ref|YP_008142455.1| - 8.3 5.7 99.8 4.5 6.6 25.1 6.5 2 2 2 4 4 4 0 Intermediate filament protein Radical_SAM PF04055.16 gi|518652936|ref|YP_008142456.1| - 5.4e-19 68.9 0.1 3.6e-18 66.2 0.0 2.3 2 1 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|518652936|ref|YP_008142456.1| - 0.0093 15.8 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain TraB PF01963.12 gi|518652937|ref|YP_008142457.1| - 0.062 12.7 0.2 0.066 12.6 0.1 1.0 1 0 0 1 1 1 0 TraB family DUF2262 PF10020.4 gi|518652937|ref|YP_008142457.1| - 0.16 12.1 1.2 0.19 11.9 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) Fib_alpha PF08702.5 gi|518652937|ref|YP_008142457.1| - 0.17 12.0 1.7 0.17 12.0 1.1 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family tRNA-synt_1b PF00579.20 gi|518652938|ref|YP_008142458.1| - 2.5e-45 154.8 0.0 3.4e-45 154.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Trigger_C PF05698.9 gi|518652939|ref|YP_008142459.1| - 0.009 15.8 0.5 0.013 15.3 0.3 1.3 1 1 0 1 1 1 1 Bacterial trigger factor protein (TF) C-terminus DUF2969 PF11184.3 gi|518652939|ref|YP_008142459.1| - 0.019 15.0 0.4 0.026 14.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2969) DUF220 PF02713.9 gi|518652939|ref|YP_008142459.1| - 0.26 10.9 1.2 0.46 10.2 0.8 1.5 1 1 0 1 1 1 0 Domain of unknown function DUF220 XPG_I PF00867.13 gi|518652940|ref|YP_008142460.1| - 2.7e-25 88.2 0.0 5.5e-25 87.2 0.0 1.6 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.12 gi|518652940|ref|YP_008142460.1| - 3.3e-17 62.5 0.0 5.8e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.15 gi|518652940|ref|YP_008142460.1| - 7.1e-06 26.1 0.2 7.1e-06 26.1 0.1 1.8 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.2 gi|518652940|ref|YP_008142460.1| - 0.00078 19.2 0.0 0.0019 18.0 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif Rad51 PF08423.6 gi|518652941|ref|YP_008142461.1| - 1.5e-21 76.4 0.1 2e-21 76.0 0.0 1.1 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.1 gi|518652941|ref|YP_008142461.1| - 2e-07 30.5 0.0 3.4e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain KaiC PF06745.8 gi|518652941|ref|YP_008142461.1| - 5.6e-06 25.6 1.2 1.6e-05 24.1 0.8 1.7 1 1 0 1 1 1 1 KaiC Zot PF05707.7 gi|518652941|ref|YP_008142461.1| - 0.0007 19.1 0.0 0.0017 17.8 0.0 1.6 1 1 1 2 2 2 1 Zonular occludens toxin (Zot) RecA PF00154.16 gi|518652941|ref|YP_008142461.1| - 0.0018 17.3 0.0 0.0033 16.5 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein UPF0079 PF02367.12 gi|518652941|ref|YP_008142461.1| - 0.009 15.6 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 ABC_tran PF00005.22 gi|518652941|ref|YP_008142461.1| - 0.053 13.8 0.4 0.13 12.5 0.3 1.8 1 1 0 1 1 1 0 ABC transporter YwiC PF14256.1 gi|518652942|ref|YP_008142462.1| - 0.067 13.2 2.0 0.093 12.8 1.4 1.2 1 0 0 1 1 1 0 YwiC-like protein DUF3784 PF12650.2 gi|518652942|ref|YP_008142462.1| - 0.1 12.5 7.8 0.2 11.6 5.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF1312 PF07009.6 gi|518652942|ref|YP_008142462.1| - 0.12 12.2 0.2 0.25 11.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1312) YjgP_YjgQ PF03739.9 gi|518652942|ref|YP_008142462.1| - 0.15 10.7 3.8 0.084 11.6 1.3 1.5 1 1 0 1 1 1 0 Predicted permease YjgP/YjgQ family MFS_1 PF07690.11 gi|518652943|ref|YP_008142463.1| - 3.6e-31 108.1 45.8 3.6e-31 108.1 31.7 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652943|ref|YP_008142463.1| - 1.9e-15 56.4 17.4 1.9e-15 56.4 12.0 2.1 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.1 gi|518652943|ref|YP_008142463.1| - 0.018 13.4 25.9 0.012 14.0 2.3 2.8 1 1 2 3 3 3 0 MFS/sugar transport protein bact-PGI_C PF10432.4 gi|518652944|ref|YP_008142464.1| - 1.4e-42 145.0 0.0 2.2e-42 144.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal region SIS PF01380.17 gi|518652944|ref|YP_008142464.1| - 1.2e-08 34.6 0.3 5.7e-08 32.4 0.2 2.1 2 1 0 2 2 2 1 SIS domain SIS_2 PF13580.1 gi|518652944|ref|YP_008142464.1| - 0.0013 18.4 0.0 0.0094 15.6 0.0 2.2 2 0 0 2 2 2 1 SIS domain PGI PF00342.14 gi|518652944|ref|YP_008142464.1| - 0.012 14.0 0.1 0.48 8.7 0.0 2.6 3 0 0 3 3 3 0 Phosphoglucose isomerase FbpA PF05833.6 gi|518652945|ref|YP_008142465.1| - 3.8e-45 154.2 11.5 5.1e-45 153.8 8.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|518652945|ref|YP_008142465.1| - 4.6e-24 84.1 0.0 1.1e-23 82.8 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF814) DUF3441 PF11923.3 gi|518652945|ref|YP_008142465.1| - 0.00029 20.3 1.1 0.0025 17.3 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3441) RabGAP-TBC PF00566.13 gi|518652945|ref|YP_008142465.1| - 0.043 13.2 0.9 0.081 12.3 0.6 1.4 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Abhydrolase_6 PF12697.2 gi|518652946|ref|YP_008142466.1| - 3.4e-24 86.0 0.0 2.5e-11 43.9 0.0 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|518652946|ref|YP_008142466.1| - 9.3e-17 61.1 0.0 1.1e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|518652946|ref|YP_008142466.1| - 1.9e-14 53.7 0.1 3.8e-11 42.9 0.0 2.4 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.5 gi|518652946|ref|YP_008142466.1| - 9e-05 22.3 0.0 0.00013 21.8 0.0 1.2 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_2 PF02230.11 gi|518652946|ref|YP_008142466.1| - 0.0047 16.3 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.3 gi|518652946|ref|YP_008142466.1| - 0.0083 15.9 0.0 0.018 14.9 0.0 1.7 1 0 0 1 1 1 1 Putative lysophospholipase VQ PF05678.9 gi|518652946|ref|YP_008142466.1| - 0.038 13.0 0.1 0.062 12.3 0.0 1.4 1 0 0 1 1 1 0 VQ motif Peptidase_M50 PF02163.17 gi|518652947|ref|YP_008142467.1| - 2.3e-30 104.9 0.0 5.7e-30 103.7 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.1 gi|518652947|ref|YP_008142467.1| - 0.018 14.8 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 PDZ domain MarR PF01047.17 gi|518652948|ref|YP_008142468.1| - 4.6e-13 48.6 0.1 6.6e-13 48.1 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|518652948|ref|YP_008142468.1| - 3.6e-06 26.5 0.0 4.9e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|518652948|ref|YP_008142468.1| - 3.1e-05 24.1 0.0 4.6e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|518652948|ref|YP_008142468.1| - 0.00053 19.9 0.0 0.00084 19.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain FUR PF01475.14 gi|518652948|ref|YP_008142468.1| - 0.0067 16.3 0.1 0.027 14.4 0.0 1.9 2 1 0 2 2 2 1 Ferric uptake regulator family DUF3116 PF11313.3 gi|518652948|ref|YP_008142468.1| - 0.019 14.5 0.1 0.054 13.1 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3116) TrmB PF01978.14 gi|518652948|ref|YP_008142468.1| - 0.022 14.4 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB POR_N PF01855.14 gi|518652949|ref|YP_008142469.1| - 3.2e-55 187.1 0.1 4.5e-55 186.6 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|518652949|ref|YP_008142469.1| - 3.5e-38 131.2 0.1 8e-38 130.0 0.1 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.13 gi|518652949|ref|YP_008142469.1| - 0.00018 21.0 0.3 0.00031 20.2 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518652950|ref|YP_008142470.1| - 4.2e-31 107.5 0.2 8.6e-31 106.5 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|518652950|ref|YP_008142470.1| - 4.7e-16 58.4 1.0 1.1e-15 57.3 0.7 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal Filament PF00038.16 gi|518652951|ref|YP_008142471.1| - 0.0039 16.7 2.0 0.0043 16.5 1.4 1.0 1 0 0 1 1 1 1 Intermediate filament protein DUF603 PF04645.7 gi|518652951|ref|YP_008142471.1| - 0.011 15.7 2.4 0.011 15.6 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF603 Enkurin PF13864.1 gi|518652951|ref|YP_008142471.1| - 0.067 13.4 2.5 0.078 13.1 1.7 1.1 1 0 0 1 1 1 0 Calmodulin-binding ACCA PF03255.9 gi|518652951|ref|YP_008142471.1| - 0.11 12.0 2.4 0.12 11.9 1.7 1.0 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF3086 PF11285.3 gi|518652951|ref|YP_008142471.1| - 0.17 10.6 1.0 0.16 10.7 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) Protamine_3 PF08188.6 gi|518652951|ref|YP_008142471.1| - 0.17 11.8 0.8 0.19 11.7 0.4 1.3 1 1 0 1 1 1 0 Spermatozal protamine family Spore_III_AB PF09548.5 gi|518652951|ref|YP_008142471.1| - 0.18 11.5 0.8 0.21 11.3 0.6 1.3 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) PRP1_N PF06424.7 gi|518652951|ref|YP_008142471.1| - 0.27 11.5 3.5 0.29 11.4 2.5 1.0 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Snf7 PF03357.16 gi|518652951|ref|YP_008142471.1| - 0.54 9.6 6.1 0.75 9.1 4.2 1.2 1 1 0 1 1 1 0 Snf7 Pox_A_type_inc PF04508.7 gi|518652951|ref|YP_008142471.1| - 0.81 9.6 8.0 0.82 9.6 0.2 2.9 2 1 0 2 2 2 0 Viral A-type inclusion protein repeat Matrilin_ccoil PF10393.4 gi|518652951|ref|YP_008142471.1| - 1.3 8.4 3.8 0.96 8.8 0.1 2.0 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin XhlA PF10779.4 gi|518652951|ref|YP_008142471.1| - 2.5 8.0 6.0 3 7.8 4.2 1.1 1 0 0 1 1 1 0 Haemolysin XhlA DUF971 PF06155.7 gi|518652952|ref|YP_008142472.1| - 0.00051 20.4 0.1 0.00061 20.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF971) Phe_tRNA-synt_N PF02912.13 gi|518652952|ref|YP_008142472.1| - 0.035 13.8 1.9 0.11 12.2 0.5 2.0 2 0 0 2 2 2 0 Aminoacyl tRNA synthetase class II, N-terminal domain AAA_18 PF13238.1 gi|518652953|ref|YP_008142473.1| - 9.7e-14 51.7 6.4 1.6e-11 44.5 4.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|518652953|ref|YP_008142473.1| - 1.4e-08 35.5 0.3 2.4e-08 34.8 0.2 1.5 1 1 0 1 1 1 1 AAA domain CoaE PF01121.15 gi|518652953|ref|YP_008142473.1| - 5.4e-05 22.6 1.0 0.098 12.0 0.2 2.3 1 1 0 2 2 2 2 Dephospho-CoA kinase AAA_28 PF13521.1 gi|518652953|ref|YP_008142473.1| - 0.00035 20.5 0.2 0.00059 19.8 0.1 1.5 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.12 gi|518652953|ref|YP_008142473.1| - 0.00073 18.9 0.6 0.37 10.1 0.0 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_33 PF13671.1 gi|518652953|ref|YP_008142473.1| - 0.0029 17.4 0.1 0.031 14.1 0.0 2.1 1 1 1 2 2 2 1 AAA domain AAA PF00004.24 gi|518652953|ref|YP_008142473.1| - 0.0059 16.8 0.3 0.013 15.7 0.2 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.10 gi|518652953|ref|YP_008142473.1| - 0.0062 16.2 2.0 0.0087 15.7 0.7 2.0 2 1 0 2 2 1 1 NTPase AAA_24 PF13479.1 gi|518652953|ref|YP_008142473.1| - 0.0095 15.5 0.4 0.034 13.7 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|518652953|ref|YP_008142473.1| - 0.011 15.4 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain AAA_22 PF13401.1 gi|518652953|ref|YP_008142473.1| - 0.011 15.8 0.8 0.025 14.7 0.6 1.9 1 1 0 1 1 1 0 AAA domain KaiC PF06745.8 gi|518652953|ref|YP_008142473.1| - 0.019 14.0 0.4 0.28 10.2 0.1 2.1 2 0 0 2 2 2 0 KaiC KTI12 PF08433.5 gi|518652953|ref|YP_008142473.1| - 0.019 14.1 0.0 0.022 13.9 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_14 PF13173.1 gi|518652953|ref|YP_008142473.1| - 0.022 14.6 0.1 0.038 13.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|518652953|ref|YP_008142473.1| - 0.032 13.7 0.6 0.043 13.3 0.4 1.4 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ADK PF00406.17 gi|518652953|ref|YP_008142473.1| - 0.035 13.9 0.8 3.6 7.4 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase cobW PF02492.14 gi|518652953|ref|YP_008142473.1| - 0.041 13.3 0.6 0.087 12.2 0.3 1.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SKI PF01202.17 gi|518652953|ref|YP_008142473.1| - 0.045 13.6 1.3 5.6 6.8 0.0 2.2 2 0 0 2 2 2 0 Shikimate kinase SpoVAE PF14097.1 gi|518652953|ref|YP_008142473.1| - 0.056 12.8 0.1 0.08 12.3 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AE1 APS_kinase PF01583.15 gi|518652953|ref|YP_008142473.1| - 0.079 12.6 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase Cytidylate_kin2 PF13189.1 gi|518652953|ref|YP_008142473.1| - 0.086 12.7 1.6 0.67 9.8 1.1 2.2 1 1 0 1 1 1 0 Cytidylate kinase-like family ABC_tran PF00005.22 gi|518652953|ref|YP_008142473.1| - 0.11 12.7 1.2 0.14 12.4 0.8 1.5 1 1 0 1 1 1 0 ABC transporter ArgK PF03308.11 gi|518652953|ref|YP_008142473.1| - 0.13 11.0 0.1 0.21 10.2 0.1 1.3 1 0 0 1 1 1 0 ArgK protein AAA_25 PF13481.1 gi|518652953|ref|YP_008142473.1| - 0.13 11.6 0.2 0.9 8.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|518652953|ref|YP_008142473.1| - 0.13 11.9 0.1 0.29 10.8 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MGS PF02142.17 gi|518652953|ref|YP_008142473.1| - 0.14 12.1 0.0 0.22 11.4 0.0 1.4 1 1 0 1 1 1 0 MGS-like domain DUF1743 PF08489.6 gi|518652954|ref|YP_008142474.1| - 5.8e-25 87.3 0.0 9.3e-25 86.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) TA0956 PF11513.3 gi|518652954|ref|YP_008142474.1| - 0.069 13.2 0.3 0.32 11.0 0.1 2.2 1 1 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 Fimbrial_PilY2 PF14481.1 gi|518652954|ref|YP_008142474.1| - 0.071 12.5 0.0 0.18 11.2 0.0 1.6 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 zinc-ribbons_6 PF07191.7 gi|518652954|ref|YP_008142474.1| - 0.072 12.8 1.4 0.12 12.1 0.9 1.3 1 0 0 1 1 1 0 zinc-ribbons Rep_fac-A_C PF08646.5 gi|518652954|ref|YP_008142474.1| - 0.078 12.6 1.6 0.13 11.9 1.1 1.3 1 0 0 1 1 1 0 Replication factor-A C terminal domain zf-met PF12874.2 gi|518652954|ref|YP_008142474.1| - 0.11 12.7 0.5 5.5 7.3 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-RING_4 PF14570.1 gi|518652954|ref|YP_008142474.1| - 0.13 11.8 4.0 0.33 10.5 2.8 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DZR PF12773.2 gi|518652954|ref|YP_008142474.1| - 0.16 11.8 1.1 0.31 10.8 0.8 1.4 1 0 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|518652954|ref|YP_008142474.1| - 0.16 11.7 3.7 0.34 10.7 2.6 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2H2 PF00096.21 gi|518652954|ref|YP_008142474.1| - 3.1 8.3 5.4 1.9 9.0 0.8 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.1 gi|518652954|ref|YP_008142474.1| - 3.9 7.9 7.0 2.6 8.5 3.1 2.1 1 1 1 2 2 2 0 Zinc-finger double domain Prenyltransf PF01255.14 gi|518652955|ref|YP_008142475.1| - 2.8e-80 268.6 0.1 3.2e-80 268.4 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Pyr_redox_2 PF07992.9 gi|518652956|ref|YP_008142476.1| - 5.4e-32 111.2 1.6 9.1e-31 107.2 1.1 3.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|518652956|ref|YP_008142476.1| - 2.7e-26 91.7 0.1 5.3e-26 90.7 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|518652956|ref|YP_008142476.1| - 6e-17 61.8 0.1 6e-17 61.8 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518652956|ref|YP_008142476.1| - 2.1e-06 27.9 0.0 4.8e-05 23.4 0.0 2.4 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|518652956|ref|YP_008142476.1| - 1.9e-05 23.7 3.5 3.4e-05 22.8 0.4 2.6 2 2 1 3 3 3 1 Glucose inhibited division protein A 3HCDH_N PF02737.13 gi|518652956|ref|YP_008142476.1| - 0.00024 20.7 0.0 0.0039 16.8 0.0 2.6 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAO PF01266.19 gi|518652956|ref|YP_008142476.1| - 0.00049 19.1 0.0 0.11 11.4 0.0 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase F420_oxidored PF03807.12 gi|518652956|ref|YP_008142476.1| - 0.0067 16.8 2.2 1.2 9.6 0.0 3.4 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent HI0933_like PF03486.9 gi|518652956|ref|YP_008142476.1| - 0.0083 14.6 7.5 0.58 8.5 0.9 3.3 2 2 2 4 4 4 2 HI0933-like protein NAD_Gly3P_dh_N PF01210.18 gi|518652956|ref|YP_008142476.1| - 0.016 14.9 0.0 0.016 14.9 0.0 3.5 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.15 gi|518652956|ref|YP_008142476.1| - 0.019 15.0 1.4 0.034 14.2 0.0 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518652956|ref|YP_008142476.1| - 0.025 13.7 0.8 0.55 9.3 0.0 2.7 2 1 1 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|518652956|ref|YP_008142476.1| - 0.039 14.2 0.2 0.42 10.9 0.0 2.5 2 1 0 2 2 2 0 Putative NAD(P)-binding NAD_binding_9 PF13454.1 gi|518652956|ref|YP_008142476.1| - 0.16 11.6 0.0 4 7.2 0.0 2.3 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_binding_2 PF00890.19 gi|518652956|ref|YP_008142476.1| - 0.19 10.5 2.3 0.78 8.5 0.9 2.1 2 0 0 2 2 2 0 FAD binding domain HMA PF00403.21 gi|518652957|ref|YP_008142477.1| - 4.6e-10 39.4 0.5 5.3e-10 39.2 0.3 1.2 1 0 0 1 1 1 1 Heavy-metal-associated domain CH PF00307.26 gi|518652957|ref|YP_008142477.1| - 0.0014 18.6 0.0 0.0018 18.3 0.0 1.1 1 0 0 1 1 1 1 Calponin homology (CH) domain HxlR PF01638.12 gi|518652958|ref|YP_008142478.1| - 5e-09 35.6 0.0 6.4e-09 35.3 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.1 gi|518652958|ref|YP_008142478.1| - 0.0038 17.0 0.0 0.0058 16.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|518652958|ref|YP_008142478.1| - 0.0043 17.3 0.0 0.0053 17.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_12 PF08461.5 gi|518652958|ref|YP_008142478.1| - 0.083 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Met_10 PF02475.11 gi|518652959|ref|YP_008142479.1| - 5.2e-54 182.8 0.0 7e-54 182.4 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.9 gi|518652959|ref|YP_008142479.1| - 6.1e-09 35.4 0.0 9.8e-09 34.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|518652959|ref|YP_008142479.1| - 1.3e-06 28.9 0.0 3e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|518652959|ref|YP_008142479.1| - 2.6e-06 27.4 0.0 6.8e-06 26.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.13 gi|518652959|ref|YP_008142479.1| - 1.9e-05 24.3 0.0 3.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|518652959|ref|YP_008142479.1| - 0.00012 21.3 0.0 0.00018 20.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|518652959|ref|YP_008142479.1| - 0.00013 21.5 0.0 0.00027 20.5 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|518652959|ref|YP_008142479.1| - 0.0002 20.7 0.0 0.00042 19.7 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 DNA_methylase PF00145.12 gi|518652959|ref|YP_008142479.1| - 0.0028 16.8 0.1 0.014 14.5 0.0 1.8 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase TRM PF02005.11 gi|518652959|ref|YP_008142479.1| - 0.004 16.1 0.1 0.005 15.8 0.0 1.5 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_16 PF10294.4 gi|518652959|ref|YP_008142479.1| - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase DEAD PF00270.24 gi|518652960|ref|YP_008142480.1| - 5.3e-23 81.3 0.0 1.3e-22 80.0 0.0 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase HHH_5 PF14520.1 gi|518652960|ref|YP_008142480.1| - 7.5e-12 45.2 0.1 5.3e-11 42.5 0.1 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain Helicase_C PF00271.26 gi|518652960|ref|YP_008142480.1| - 1.3e-10 40.9 0.1 3e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518652960|ref|YP_008142480.1| - 4e-08 33.3 0.0 3.8e-06 26.8 0.0 3.2 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_2 PF12826.2 gi|518652960|ref|YP_008142480.1| - 1.7e-06 27.8 0.5 6.9e-05 22.6 0.0 3.2 3 0 0 3 3 3 1 Helix-hairpin-helix motif PhoH PF02562.11 gi|518652960|ref|YP_008142480.1| - 0.00095 18.4 0.1 0.59 9.3 0.0 2.6 2 0 0 2 2 2 2 PhoH-like protein DNA_pol_lambd_f PF10391.4 gi|518652960|ref|YP_008142480.1| - 0.068 12.7 0.0 0.24 10.9 0.0 1.9 1 1 0 1 1 1 0 Fingers domain of DNA polymerase lambda T2SE PF00437.15 gi|518652960|ref|YP_008142480.1| - 0.11 11.3 0.0 0.21 10.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Oxidored_q1 PF00361.15 gi|518652961|ref|YP_008142481.1| - 2.8e-24 85.8 33.3 2.8e-24 85.8 23.1 4.4 5 0 0 5 5 5 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q6 PF01058.17 gi|518652962|ref|YP_008142482.1| - 1.3e-17 63.6 0.3 3.9e-17 62.1 0.2 1.7 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|518652962|ref|YP_008142482.1| - 2.5 7.8 13.9 0.46 10.1 1.1 3.8 4 0 0 4 4 4 0 4Fe-4S binding domain Complex1_49kDa PF00346.14 gi|518652963|ref|YP_008142483.1| - 4.1e-09 35.8 0.0 4.9e-07 29.0 0.0 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|518652963|ref|YP_008142483.1| - 0.0035 16.1 0.0 0.025 13.3 0.0 1.9 2 0 0 2 2 2 1 Nickel-dependent hydrogenase Oxidored_q1 PF00361.15 gi|518652964|ref|YP_008142484.1| - 5.7e-46 156.9 21.9 5.7e-46 156.9 15.2 3.1 1 1 2 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Peptidase_M50 PF02163.17 gi|518652964|ref|YP_008142484.1| - 0.0072 15.3 0.0 0.057 12.3 0.0 2.6 2 2 0 2 2 2 1 Peptidase family M50 NADHdh PF00146.16 gi|518652966|ref|YP_008142486.1| - 7.2e-13 48.2 21.5 8e-13 48.1 14.9 1.0 1 0 0 1 1 1 1 NADH dehydrogenase CobN-Mg_chel PF02514.11 gi|518652967|ref|YP_008142487.1| - 0 1035.1 0.0 0 1029.3 0.0 2.0 1 1 0 1 1 1 1 CobN/Magnesium Chelatase VWA_2 PF13519.1 gi|518652968|ref|YP_008142488.1| - 1.3e-13 51.4 0.0 3.1e-13 50.2 0.0 1.6 2 0 0 2 2 2 1 von Willebrand factor type A domain Mg_chelatase PF01078.16 gi|518652968|ref|YP_008142488.1| - 3.7e-11 42.5 0.1 3.5e-07 29.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|518652968|ref|YP_008142488.1| - 4.1e-09 36.2 0.2 8.5e-05 22.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|518652968|ref|YP_008142488.1| - 8e-06 24.8 1.0 0.0032 16.3 0.2 3.2 2 1 0 2 2 2 1 MCM2/3/5 family Mg_chelatase_2 PF13335.1 gi|518652968|ref|YP_008142488.1| - 9.8e-05 22.6 0.1 0.00023 21.5 0.1 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|518652968|ref|YP_008142488.1| - 0.00073 19.5 0.0 0.0026 17.7 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|518652968|ref|YP_008142488.1| - 0.0095 16.0 0.0 0.041 14.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.9 gi|518652968|ref|YP_008142488.1| - 0.011 15.6 1.1 0.033 14.1 0.0 2.4 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) CD99L2 PF12301.3 gi|518652968|ref|YP_008142488.1| - 0.015 14.9 8.5 0.028 14.1 5.9 1.4 1 0 0 1 1 1 0 CD99 antigen like protein 2 Sigma54_activat PF00158.21 gi|518652968|ref|YP_008142488.1| - 0.02 14.3 0.0 0.24 10.8 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA PF00004.24 gi|518652968|ref|YP_008142488.1| - 0.031 14.4 0.0 0.25 11.5 0.0 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.1 gi|518652968|ref|YP_008142488.1| - 0.052 13.0 0.1 0.18 11.3 0.1 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain MFS_1 PF07690.11 gi|518652969|ref|YP_008142489.1| - 3.2e-34 118.1 61.5 9.9e-29 100.1 26.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518652969|ref|YP_008142489.1| - 4.2e-34 117.8 32.9 1.6e-22 79.7 9.3 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.1 gi|518652969|ref|YP_008142489.1| - 6e-08 31.5 21.1 0.00018 20.0 5.3 2.2 1 1 1 2 2 2 2 MFS/sugar transport protein DUF3552 PF12072.3 gi|518652969|ref|YP_008142489.1| - 0.18 11.0 0.0 0.36 10.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Ribosomal_L7Ae PF01248.21 gi|518652971|ref|YP_008142491.1| - 5.9e-23 80.2 0.1 1.1e-22 79.3 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DPM3 PF08285.6 gi|518652971|ref|YP_008142491.1| - 0.3 10.9 0.0 0.3 10.9 0.0 1.8 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) CT47 PF15623.1 gi|518652971|ref|YP_008142491.1| - 0.98 9.0 22.8 1.1 8.8 15.8 1.1 1 0 0 1 1 1 0 Cancer/testis gene family 47 Ycf1 PF05758.7 gi|518652971|ref|YP_008142491.1| - 1 6.9 9.9 1 6.9 6.9 1.1 1 0 0 1 1 1 0 Ycf1 Tim54 PF11711.3 gi|518652971|ref|YP_008142491.1| - 1.9 6.9 16.4 2.9 6.3 11.4 1.3 1 1 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 GAGA_bind PF06217.7 gi|518652971|ref|YP_008142491.1| - 2.8 7.8 12.6 3.5 7.5 8.8 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family DUF2413 PF10310.4 gi|518652971|ref|YP_008142491.1| - 2.8 6.6 23.2 3.6 6.2 16.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2413) DUF853 PF05872.7 gi|518652971|ref|YP_008142491.1| - 2.8 6.1 5.8 3.9 5.7 4.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Herpes_DNAp_acc PF04929.7 gi|518652971|ref|YP_008142491.1| - 2.9 6.7 12.5 3.4 6.5 8.6 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF1510 PF07423.6 gi|518652971|ref|YP_008142491.1| - 5 6.4 23.3 6.8 6.0 16.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1510) DDHD PF02862.12 gi|518652971|ref|YP_008142491.1| - 6.1 6.5 10.5 8.2 6.1 7.3 1.3 1 0 0 1 1 1 0 DDHD domain Herpes_UL17 PF04559.7 gi|518652971|ref|YP_008142491.1| - 8.2 4.8 6.8 10 4.5 4.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL17 protein Ribosomal_S28e PF01200.13 gi|518652972|ref|YP_008142492.1| - 8.7e-30 102.2 1.8 9.3e-30 102.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.15 gi|518652973|ref|YP_008142493.1| - 1.4e-19 69.7 0.5 1.4e-19 69.6 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.9 gi|518652973|ref|YP_008142493.1| - 2e-07 30.5 0.5 2.8e-07 30.0 0.3 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif DUF329 PF03884.9 gi|518652973|ref|YP_008142493.1| - 0.00019 20.9 1.4 0.00075 18.9 1.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF329) DUF581 PF04570.9 gi|518652973|ref|YP_008142493.1| - 0.00025 20.2 1.1 0.00037 19.7 0.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF581) DUF2116 PF09889.4 gi|518652973|ref|YP_008142493.1| - 0.024 14.4 1.7 3.7 7.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2256 PF10013.4 gi|518652973|ref|YP_008142493.1| - 0.38 10.5 3.8 1.1 9.0 0.1 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) NDK PF00334.14 gi|518652974|ref|YP_008142494.1| - 8.4e-54 181.0 0.0 9.4e-54 180.8 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase GTP_EFTU PF00009.22 gi|518652975|ref|YP_008142495.1| - 8.3e-34 116.6 1.4 1.5e-33 115.8 0.3 1.9 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|518652975|ref|YP_008142495.1| - 1.7e-20 72.9 3.1 1.7e-20 72.9 2.2 2.0 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.20 gi|518652975|ref|YP_008142495.1| - 4.6e-07 29.8 10.9 0.001 19.1 0.9 3.9 4 0 0 4 4 4 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|518652975|ref|YP_008142495.1| - 5e-07 29.6 0.6 1.8e-06 27.8 0.4 2.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Miro PF08477.8 gi|518652975|ref|YP_008142495.1| - 5.3e-05 23.6 0.6 0.00016 22.1 0.0 2.1 2 0 0 2 2 2 1 Miro-like protein Dynamin_N PF00350.18 gi|518652975|ref|YP_008142495.1| - 0.024 14.4 2.1 0.44 10.3 0.0 3.1 2 2 1 3 3 3 0 Dynamin family ATP_bind_1 PF03029.12 gi|518652975|ref|YP_008142495.1| - 0.029 13.9 0.1 0.084 12.4 0.0 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.14 gi|518652975|ref|YP_008142495.1| - 0.041 13.3 2.3 2.2 7.6 0.6 2.4 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF1493 PF07377.7 gi|518652975|ref|YP_008142495.1| - 0.044 13.8 0.3 0.14 12.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1493) Na_Ca_ex PF01699.19 gi|518652976|ref|YP_008142496.1| - 2e-16 59.8 37.2 1.3e-08 34.4 8.5 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein AdoMet_dc PF02675.10 gi|518652977|ref|YP_008142497.1| - 1.6e-32 111.5 0.0 1.8e-32 111.3 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase HTH_20 PF12840.2 gi|518652978|ref|YP_008142498.1| - 0.00032 20.4 0.0 0.00058 19.6 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|518652978|ref|YP_008142498.1| - 0.00036 20.1 0.0 0.0011 18.5 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|518652978|ref|YP_008142498.1| - 0.0013 18.0 0.0 0.003 16.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|518652978|ref|YP_008142498.1| - 0.0015 18.1 0.0 0.0029 17.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|518652978|ref|YP_008142498.1| - 0.0078 16.0 1.2 0.013 15.2 0.2 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix TrmB PF01978.14 gi|518652978|ref|YP_008142498.1| - 0.012 15.3 0.1 0.036 13.7 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|518652978|ref|YP_008142498.1| - 0.013 15.1 0.2 0.013 15.1 0.1 1.9 2 0 0 2 2 2 0 HTH domain HTH_27 PF13463.1 gi|518652978|ref|YP_008142498.1| - 0.076 13.3 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain LexA_DNA_bind PF01726.11 gi|518652978|ref|YP_008142498.1| - 0.099 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HxlR PF01638.12 gi|518652978|ref|YP_008142498.1| - 0.13 11.8 0.1 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix TMP-TENI PF02581.12 gi|518652979|ref|YP_008142499.1| - 3.9e-48 162.9 0.0 4.5e-48 162.7 0.0 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI DUF561 PF04481.7 gi|518652979|ref|YP_008142499.1| - 3.6e-06 26.1 0.1 7.8e-05 21.7 0.2 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF561) DUF1065 PF06358.6 gi|518652979|ref|YP_008142499.1| - 0.3 10.8 1.8 2.6 7.8 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1065) AIRS_C PF02769.17 gi|518652980|ref|YP_008142500.1| - 1.8e-21 76.7 0.0 2.4e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|518652980|ref|YP_008142500.1| - 8.4e-05 22.7 0.0 0.00016 21.8 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Erf4 PF10256.4 gi|518652980|ref|YP_008142500.1| - 0.071 12.9 0.0 5.4 6.9 0.0 2.4 2 0 0 2 2 2 0 Golgin subfamily A member 7/ERF4 family Phos_pyr_kin PF08543.7 gi|518652981|ref|YP_008142501.1| - 1.8e-88 295.9 0.1 2e-88 295.7 0.1 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.19 gi|518652981|ref|YP_008142501.1| - 2.6e-12 46.5 0.0 3.8e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.12 gi|518652981|ref|YP_008142501.1| - 0.00011 21.5 0.0 0.00019 20.7 0.0 1.4 1 0 0 1 1 1 1 Carbohydrate kinase CbiK PF06180.6 gi|518652981|ref|YP_008142501.1| - 0.018 14.1 0.1 0.033 13.2 0.1 1.4 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) DUF1667 PF07892.6 gi|518652981|ref|YP_008142501.1| - 0.044 13.4 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1667) Glyco_tranf_2_3 PF13641.1 gi|518652982|ref|YP_008142502.1| - 1.2e-37 129.9 0.0 1.4e-37 129.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.21 gi|518652982|ref|YP_008142502.1| - 8.9e-34 116.6 1.0 1.6e-33 115.7 0.7 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.1 gi|518652982|ref|YP_008142502.1| - 3.5e-25 88.8 1.3 5.5e-25 88.2 0.9 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 gi|518652982|ref|YP_008142502.1| - 7.8e-15 54.7 1.6 1.1e-14 54.1 1.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|518652982|ref|YP_008142502.1| - 3.1e-09 36.3 0.0 4.3e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|518652982|ref|YP_008142502.1| - 0.00023 21.4 0.0 0.00048 20.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Chitin_synth_2 PF03142.10 gi|518652982|ref|YP_008142502.1| - 0.0011 17.4 3.6 0.0011 17.4 2.5 2.5 3 0 0 3 3 3 1 Chitin synthase Vesiculo_matrix PF06326.7 gi|518652982|ref|YP_008142502.1| - 0.048 13.1 0.5 0.11 11.9 0.1 1.7 2 0 0 2 2 2 0 Vesiculovirus matrix protein Ninjurin PF04923.7 gi|518652982|ref|YP_008142502.1| - 0.18 11.5 2.9 0.57 9.9 2.0 1.9 1 0 0 1 1 1 0 Ninjurin CDP-OH_P_transf PF01066.16 gi|518652983|ref|YP_008142503.1| - 2.9e-17 62.8 6.0 2.9e-17 62.8 4.2 2.0 1 1 1 2 2 2 1 CDP-alcohol phosphatidyltransferase PGM_PMM_I PF02878.11 gi|518652984|ref|YP_008142504.1| - 1.4e-37 128.2 0.1 1.4e-36 124.9 0.0 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|518652984|ref|YP_008142504.1| - 8.1e-27 93.5 0.0 2e-26 92.2 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|518652984|ref|YP_008142504.1| - 3e-25 88.4 0.0 5.8e-25 87.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|518652984|ref|YP_008142504.1| - 1.7e-10 40.7 0.0 4.2e-10 39.5 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Glyco_transf_21 PF13506.1 gi|518652985|ref|YP_008142505.1| - 4.8e-19 68.3 0.0 7.1e-19 67.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glycos_transf_2 PF00535.21 gi|518652985|ref|YP_008142505.1| - 7.3e-10 38.7 0.0 2.3e-09 37.1 0.0 1.8 3 0 0 3 3 3 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518652985|ref|YP_008142505.1| - 3.3e-09 36.9 0.0 4.5e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|518652985|ref|YP_008142505.1| - 1.2e-06 28.4 0.3 1.9e-06 27.7 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 DUF3430 PF11912.3 gi|518652985|ref|YP_008142505.1| - 0.084 12.6 3.4 0.18 11.5 2.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) DUF4405 PF14358.1 gi|518652985|ref|YP_008142505.1| - 0.74 9.9 8.0 4.9 7.3 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4405) EF1_GNE PF00736.14 gi|518652986|ref|YP_008142506.1| - 1.7e-18 66.1 1.7 1.8e-18 66.0 1.2 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain HMA PF00403.21 gi|518652986|ref|YP_008142506.1| - 0.17 12.0 1.2 5.1 7.3 0.1 2.1 2 0 0 2 2 2 0 Heavy-metal-associated domain Peptidase_M50 PF02163.17 gi|518652988|ref|YP_008142508.1| - 1.4e-14 53.5 18.2 3e-14 52.4 10.3 2.6 2 1 0 2 2 2 1 Peptidase family M50 HupE_UreJ_2 PF13795.1 gi|518652988|ref|YP_008142508.1| - 0.0033 16.9 2.6 0.0033 16.9 1.8 1.8 2 1 0 2 2 2 1 HupE / UreJ protein DUF843 PF05814.6 gi|518652988|ref|YP_008142508.1| - 0.45 10.3 0.2 0.45 10.3 0.1 2.5 3 0 0 3 3 3 0 Baculovirus protein of unknown function (DUF843) FA_desaturase PF00487.19 gi|518652988|ref|YP_008142508.1| - 1.1 8.6 16.2 1.2 8.5 1.2 2.7 1 1 1 2 2 2 0 Fatty acid desaturase PgaD PF13994.1 gi|518652988|ref|YP_008142508.1| - 4.5 6.7 8.6 2.9 7.3 4.2 2.0 1 1 1 2 2 2 0 PgaD-like protein DUF2973 PF11189.3 gi|518652988|ref|YP_008142508.1| - 4.9 6.9 5.9 14 5.4 0.4 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2973) TPR_19 PF14559.1 gi|518652989|ref|YP_008142509.1| - 6.5e-09 36.0 0.9 0.16 12.3 0.0 6.0 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|518652989|ref|YP_008142509.1| - 6.4e-06 26.6 0.1 0.38 11.4 0.0 4.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.12 gi|518652989|ref|YP_008142509.1| - 0.0057 16.4 17.8 0.39 10.7 0.1 6.5 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518652989|ref|YP_008142509.1| - 0.0073 16.8 0.3 67 4.5 0.0 5.5 5 1 1 6 6 6 0 Tetratricopeptide repeat TPR_15 PF13429.1 gi|518652989|ref|YP_008142509.1| - 0.0074 15.3 6.9 0.1 11.6 0.0 4.3 3 1 0 4 4 4 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|518652989|ref|YP_008142509.1| - 0.014 15.5 0.2 0.014 15.5 0.1 6.5 7 1 0 7 7 7 0 Anaphase-promoting complex, cyclosome, subunit 3 PPR PF01535.15 gi|518652989|ref|YP_008142509.1| - 0.017 15.0 0.0 13 6.0 0.0 4.2 3 0 0 3 3 3 0 PPR repeat TPR_11 PF13414.1 gi|518652989|ref|YP_008142509.1| - 0.069 12.8 17.8 0.074 12.7 0.2 6.5 7 0 0 7 7 7 0 TPR repeat BTAD PF03704.12 gi|518652989|ref|YP_008142509.1| - 0.072 13.3 0.0 2.6 8.3 0.0 2.4 2 0 0 2 2 2 0 Bacterial transcriptional activator domain TPR_7 PF13176.1 gi|518652989|ref|YP_008142509.1| - 0.22 11.4 10.3 2.1 8.3 1.4 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat Ubie_methyltran PF01209.13 gi|518652990|ref|YP_008142510.1| - 2.2e-25 89.1 3.2 3.9e-25 88.3 2.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.7 gi|518652990|ref|YP_008142510.1| - 3e-13 50.0 0.0 6e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|518652990|ref|YP_008142510.1| - 2.6e-08 34.1 0.0 1.1e-07 32.1 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|518652990|ref|YP_008142510.1| - 2.7e-08 33.5 0.1 9.6e-08 31.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|518652990|ref|YP_008142510.1| - 2.3e-06 27.1 0.0 3.5e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.7 gi|518652990|ref|YP_008142510.1| - 5.8e-06 26.6 0.0 1.8e-05 25.1 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|518652990|ref|YP_008142510.1| - 9.5e-05 22.1 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|518652990|ref|YP_008142510.1| - 0.005 17.4 0.0 0.01 16.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|518652990|ref|YP_008142510.1| - 0.006 15.4 0.0 0.0077 15.1 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.1 gi|518652990|ref|YP_008142510.1| - 0.011 15.4 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|518652990|ref|YP_008142510.1| - 0.043 13.1 0.0 0.11 11.8 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase small domain DUF2200 PF09966.4 gi|518652990|ref|YP_008142510.1| - 0.073 12.9 0.0 0.3 10.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2200) Sec7 PF01369.15 gi|518652990|ref|YP_008142510.1| - 0.097 12.3 0.3 0.41 10.2 0.0 1.9 2 1 1 3 3 3 0 Sec7 domain GAD-like PF08887.6 gi|518652990|ref|YP_008142510.1| - 0.1 12.6 0.0 5.5 7.1 0.0 2.4 2 0 0 2 2 2 0 GAD-like domain Trm112p PF03966.11 gi|518652991|ref|YP_008142511.1| - 1.3e-07 31.8 0.1 3.1e-07 30.6 0.0 1.6 1 1 0 1 1 1 1 Trm112p-like protein Lar_restr_allev PF14354.1 gi|518652991|ref|YP_008142511.1| - 0.12 12.7 0.2 0.65 10.3 0.1 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar PhnA_Zn_Ribbon PF08274.7 gi|518652991|ref|YP_008142511.1| - 0.12 12.1 0.2 3 7.7 0.0 2.4 2 1 0 2 2 2 0 PhnA Zinc-Ribbon DUF981 PF06168.6 gi|518652992|ref|YP_008142512.1| - 4.5e-52 176.6 12.4 4.9e-52 176.4 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF2417 PF10329.4 gi|518652992|ref|YP_008142512.1| - 0.14 11.5 1.5 0.19 11.1 1.0 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF3429 PF11911.3 gi|518652992|ref|YP_008142512.1| - 0.17 11.8 4.1 0.13 12.2 1.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3429) DUF998 PF06197.8 gi|518652992|ref|YP_008142512.1| - 0.26 10.5 7.4 0.072 12.4 2.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF998) DUF1109 PF06532.6 gi|518652992|ref|YP_008142512.1| - 1.1 8.6 4.8 0.25 10.7 0.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1109) Plasmod_dom_1 PF09715.5 gi|518652993|ref|YP_008142513.1| - 0.085 12.7 0.5 0.2 11.5 0.3 1.6 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF1275 PF06912.6 gi|518652993|ref|YP_008142513.1| - 0.086 12.0 13.6 0.3 10.2 3.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1275) ATPase_gene1 PF09527.5 gi|518652993|ref|YP_008142513.1| - 0.49 10.2 14.7 0.98 9.2 3.4 3.0 2 1 1 3 3 3 0 Putative F0F1-ATPase subunit (ATPase_gene1) DUF2370 PF10176.4 gi|518652993|ref|YP_008142513.1| - 1.9 7.7 5.5 1.1 8.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2370) PrgI PF12666.2 gi|518652993|ref|YP_008142513.1| - 2.1 8.5 15.1 4 7.6 3.5 2.2 1 1 1 2 2 2 0 PrgI family protein AA_permease PF00324.16 gi|518652994|ref|YP_008142514.1| - 8e-28 97.0 60.9 9.9e-28 96.6 42.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518652994|ref|YP_008142514.1| - 8.3e-21 74.0 69.6 1.1e-20 73.6 48.2 1.1 1 0 0 1 1 1 1 Amino acid permease Isochorismatase PF00857.15 gi|518652995|ref|YP_008142515.1| - 2.1e-43 148.2 0.0 2.5e-43 148.0 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family NAD_binding_7 PF13241.1 gi|518652996|ref|YP_008142516.1| - 8.5e-20 70.9 0.2 1.6e-19 70.0 0.1 1.5 2 0 0 2 2 2 1 Putative NAD(P)-binding Sirohm_synth_M PF14824.1 gi|518652996|ref|YP_008142516.1| - 0.024 13.5 1.1 0.051 12.5 0.0 2.0 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central EntA_Immun PF08951.5 gi|518652996|ref|YP_008142516.1| - 0.053 13.6 0.4 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Enterocin A Immunity Shikimate_DH PF01488.15 gi|518652996|ref|YP_008142516.1| - 0.054 13.5 0.5 0.088 12.9 0.3 1.5 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Acyl-CoA_dh_1 PF00441.19 gi|518652997|ref|YP_008142517.1| - 4.3e-49 166.4 1.2 6.2e-49 165.9 0.9 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.6 gi|518652997|ref|YP_008142517.1| - 1.5e-24 86.7 0.2 2.4e-24 86.1 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.11 gi|518652997|ref|YP_008142517.1| - 1.4e-23 83.5 0.0 3e-23 82.5 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.14 gi|518652997|ref|YP_008142517.1| - 7.4e-18 63.8 0.2 1.4e-17 62.9 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Asparaginase PF00710.15 gi|518652998|ref|YP_008142518.1| - 1.4e-75 254.0 0.1 1.8e-75 253.7 0.0 1.0 1 0 0 1 1 1 1 Asparaginase GatB_N PF02934.10 gi|518652999|ref|YP_008142519.1| - 1.2e-63 214.7 0.0 1.6e-63 214.2 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GAD PF02938.9 gi|518652999|ref|YP_008142519.1| - 0.013 15.5 0.0 0.054 13.6 0.0 2.1 1 0 0 1 1 1 0 GAD domain RepB-RCR_reg PF10723.4 gi|518652999|ref|YP_008142519.1| - 0.034 13.8 2.9 2.2 8.0 0.1 3.0 3 0 0 3 3 3 0 Replication regulatory protein RepB Oxidored_q4 PF00507.14 gi|518653000|ref|YP_008142520.1| - 1.1e-26 92.5 3.2 1.1e-26 92.5 2.2 1.9 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Oxidored_q6 PF01058.17 gi|518653001|ref|YP_008142521.1| - 2.5e-21 75.6 0.2 3.2e-21 75.2 0.1 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.14 gi|518653002|ref|YP_008142522.1| - 3.2e-32 110.8 0.1 4.2e-32 110.4 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.14 gi|518653003|ref|YP_008142523.1| - 6.7e-71 238.4 0.0 8.6e-68 228.2 0.0 2.3 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NADHdh PF00146.16 gi|518653004|ref|YP_008142524.1| - 2e-73 247.2 21.8 2.5e-73 246.8 15.1 1.1 1 0 0 1 1 1 1 NADH dehydrogenase Fer4_7 PF12838.2 gi|518653005|ref|YP_008142525.1| - 1.2e-12 48.0 29.4 4e-08 33.5 7.5 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|518653005|ref|YP_008142525.1| - 1.9e-11 43.0 12.6 4.2e-06 26.1 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518653005|ref|YP_008142525.1| - 1.9e-10 40.4 4.9 7.2e-06 25.7 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518653005|ref|YP_008142525.1| - 1.2e-09 38.2 4.0 0.00032 20.8 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|518653005|ref|YP_008142525.1| - 2e-09 38.0 5.1 0.00038 21.1 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|518653005|ref|YP_008142525.1| - 2.4e-08 33.8 6.7 4e-08 33.1 4.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518653005|ref|YP_008142525.1| - 2.5e-08 33.5 20.0 4.6e-07 29.5 7.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518653005|ref|YP_008142525.1| - 5.5e-08 33.0 6.2 1.1e-07 32.0 4.3 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|518653005|ref|YP_008142525.1| - 3.9e-07 29.6 11.6 0.0029 17.4 2.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|518653005|ref|YP_008142525.1| - 4.7e-06 26.1 11.9 0.0017 18.1 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|518653005|ref|YP_008142525.1| - 1.5e-05 25.4 3.0 0.063 13.8 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|518653005|ref|YP_008142525.1| - 3.9e-05 23.6 10.4 0.023 15.0 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|518653005|ref|YP_008142525.1| - 0.0004 20.7 16.5 0.032 14.7 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|518653005|ref|YP_008142525.1| - 0.0014 18.9 13.9 0.095 13.1 1.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|518653005|ref|YP_008142525.1| - 0.017 15.5 11.6 0.29 11.5 1.7 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain HlyD PF00529.15 gi|518653005|ref|YP_008142525.1| - 0.07 12.4 0.0 0.087 12.1 0.0 1.0 1 0 0 1 1 1 0 HlyD family secretion protein Oxidored_q3 PF00499.15 gi|518653006|ref|YP_008142526.1| - 8e-11 41.9 19.4 8e-11 41.9 13.4 1.4 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PigN PF04987.9 gi|518653006|ref|YP_008142526.1| - 0.052 12.1 8.2 0.051 12.2 5.7 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) CTP_transf_1 PF01148.15 gi|518653006|ref|YP_008142526.1| - 0.23 11.0 11.3 0.26 10.9 7.8 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family DUF4040 PF13244.1 gi|518653006|ref|YP_008142526.1| - 1.7 8.6 17.0 1.1 9.3 10.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4040) Bax1-I PF01027.15 gi|518653006|ref|YP_008142526.1| - 1.9 8.0 20.3 2.1 7.9 14.1 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF998 PF06197.8 gi|518653006|ref|YP_008142526.1| - 2.3 7.4 14.2 2.6 7.3 9.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF998) TspO_MBR PF03073.10 gi|518653006|ref|YP_008142526.1| - 2.3 7.7 12.7 2.6 7.5 8.8 1.1 1 0 0 1 1 1 0 TspO/MBR family Glucos_trans_II PF14264.1 gi|518653006|ref|YP_008142526.1| - 6.3 5.6 20.8 6.8 5.5 14.4 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII Na_Ca_ex PF01699.19 gi|518653006|ref|YP_008142526.1| - 6.7 6.3 17.2 8.4 5.9 11.9 1.0 1 0 0 1 1 1 0 Sodium/calcium exchanger protein Oxidored_q3 PF00499.15 gi|518653007|ref|YP_008142527.1| - 0.0021 17.8 5.7 0.0022 17.7 3.9 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SdpI PF13630.1 gi|518653007|ref|YP_008142527.1| - 6.6 6.5 9.1 19 5.0 6.3 1.7 1 1 0 1 1 1 0 SdpI/YhfL protein family Oxidored_q2 PF00420.19 gi|518653008|ref|YP_008142528.1| - 5.7e-16 57.8 10.4 6.2e-16 57.7 7.2 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q1 PF00361.15 gi|518653009|ref|YP_008142529.1| - 1.5e-69 234.2 24.6 1.5e-69 234.2 17.0 2.9 2 0 0 2 2 2 1 NADH-Ubiquinone/plastoquinone (complex I), various chains NADH5_C PF06455.6 gi|518653009|ref|YP_008142529.1| - 6.8e-08 32.0 4.6 6.8e-08 32.0 3.2 4.2 3 3 0 4 4 4 1 NADH dehydrogenase subunit 5 C-terminus Oxidored_q1_N PF00662.15 gi|518653009|ref|YP_008142529.1| - 7.2e-05 22.2 8.8 7.2e-05 22.2 6.1 3.4 3 2 1 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF983 PF06170.7 gi|518653009|ref|YP_008142529.1| - 0.13 12.3 0.2 0.13 12.3 0.1 5.3 5 2 0 5 5 5 0 Protein of unknown function (DUF983) Oxidored_q1 PF00361.15 gi|518653010|ref|YP_008142530.1| - 1.2e-50 172.3 32.9 1.2e-50 172.3 22.8 3.5 2 2 1 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1 PF00361.15 gi|518653011|ref|YP_008142531.1| - 1.1e-45 156.0 38.9 1.1e-45 156.0 26.9 3.9 1 1 2 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Mesd PF10185.4 gi|518653012|ref|YP_008142532.1| - 0.013 15.1 0.1 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor SRP54_N PF02881.14 gi|518653012|ref|YP_008142532.1| - 0.047 13.7 0.1 0.12 12.5 0.1 1.6 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain MMS19_N PF14500.1 gi|518653012|ref|YP_008142532.1| - 0.14 11.4 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II TA0956 PF11513.3 gi|518653014|ref|YP_008142534.1| - 2.6e-45 152.9 2.4 2.9e-45 152.8 1.7 1.0 1 0 0 1 1 1 1 Thermoplasma acidophilum protein TA0956 AsnC_trans_reg PF01037.16 gi|518653015|ref|YP_008142535.1| - 3.2e-10 39.5 0.1 5e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|518653015|ref|YP_008142535.1| - 5e-09 35.4 1.0 7.9e-09 34.7 0.7 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518653015|ref|YP_008142535.1| - 8.1e-09 34.8 0.0 1.3e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|518653015|ref|YP_008142535.1| - 1.1e-05 25.0 0.0 2.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|518653015|ref|YP_008142535.1| - 5.4e-05 22.7 0.4 0.00013 21.5 0.1 1.7 2 0 0 2 2 1 1 HTH domain HTH_Mga PF08280.6 gi|518653015|ref|YP_008142535.1| - 0.00017 21.3 0.3 0.00036 20.2 0.2 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain DUF977 PF06163.6 gi|518653015|ref|YP_008142535.1| - 0.00023 20.9 1.0 0.001 18.8 0.7 1.9 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF977) HTH_9 PF08221.6 gi|518653015|ref|YP_008142535.1| - 0.0004 20.1 0.1 0.00068 19.4 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_DeoR PF08220.7 gi|518653015|ref|YP_008142535.1| - 0.00056 19.3 0.1 0.0012 18.2 0.1 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_26 PF13443.1 gi|518653015|ref|YP_008142535.1| - 0.00072 19.7 0.4 0.007 16.5 0.1 2.2 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.1 gi|518653015|ref|YP_008142535.1| - 0.00075 19.0 0.1 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain SpoIIID PF12116.3 gi|518653015|ref|YP_008142535.1| - 0.00083 19.2 0.2 0.0017 18.2 0.1 1.5 1 0 0 1 1 1 1 Stage III sporulation protein D HTH_IclR PF09339.5 gi|518653015|ref|YP_008142535.1| - 0.0011 18.5 0.0 0.0017 17.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|518653015|ref|YP_008142535.1| - 0.0015 18.1 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 MarR family RepL PF05732.6 gi|518653015|ref|YP_008142535.1| - 0.0018 17.4 1.9 0.0023 17.1 0.4 1.7 1 1 1 2 2 2 1 Firmicute plasmid replication protein (RepL) Sigma70_r4_2 PF08281.7 gi|518653015|ref|YP_008142535.1| - 0.0026 17.2 0.1 0.0059 16.0 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_27 PF13463.1 gi|518653015|ref|YP_008142535.1| - 0.0035 17.6 0.0 0.0061 16.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_28 PF13518.1 gi|518653015|ref|YP_008142535.1| - 0.0038 17.1 0.0 0.0069 16.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|518653015|ref|YP_008142535.1| - 0.0039 16.3 0.0 0.0098 15.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 DUF2089 PF09862.4 gi|518653015|ref|YP_008142535.1| - 0.005 16.6 0.1 0.01 15.6 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) HTH_5 PF01022.15 gi|518653015|ref|YP_008142535.1| - 0.0064 16.1 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Mga PF05043.8 gi|518653015|ref|YP_008142535.1| - 0.0073 16.5 0.2 0.022 15.0 0.0 1.9 2 0 0 2 2 2 1 Mga helix-turn-helix domain GerE PF00196.14 gi|518653015|ref|YP_008142535.1| - 0.011 14.9 1.6 0.014 14.6 0.4 1.8 2 0 0 2 2 1 0 Bacterial regulatory proteins, luxR family Rrf2 PF02082.15 gi|518653015|ref|YP_008142535.1| - 0.017 15.2 0.2 0.068 13.3 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator HTH_10 PF04967.7 gi|518653015|ref|YP_008142535.1| - 0.021 14.3 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_6 PF01418.12 gi|518653015|ref|YP_008142535.1| - 0.039 13.6 0.0 0.087 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family MarR PF01047.17 gi|518653015|ref|YP_008142535.1| - 0.047 13.4 0.2 0.091 12.4 0.1 1.5 1 0 0 1 1 1 0 MarR family RPA_C PF08784.6 gi|518653015|ref|YP_008142535.1| - 0.054 13.9 0.2 0.19 12.1 0.0 1.8 2 0 0 2 2 2 0 Replication protein A C terminal HTH_Crp_2 PF13545.1 gi|518653015|ref|YP_008142535.1| - 0.074 12.8 0.1 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Phage_rep_O PF04492.8 gi|518653015|ref|YP_008142535.1| - 0.097 12.8 0.7 0.27 11.4 0.1 1.9 2 0 0 2 2 2 0 Bacteriophage replication protein O TetR_N PF00440.18 gi|518653015|ref|YP_008142535.1| - 0.098 12.3 0.1 0.23 11.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.11 gi|518653015|ref|YP_008142535.1| - 0.098 11.9 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_37 PF13744.1 gi|518653015|ref|YP_008142535.1| - 0.099 12.4 0.1 0.23 11.2 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3489 PF11994.3 gi|518653015|ref|YP_008142535.1| - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) HTH_7 PF02796.10 gi|518653015|ref|YP_008142535.1| - 0.1 12.4 1.2 0.21 11.4 0.3 1.9 2 0 0 2 2 1 0 Helix-turn-helix domain of resolvase Sulfolobus_pRN PF05584.6 gi|518653015|ref|YP_008142535.1| - 0.12 12.3 0.5 0.87 9.6 0.1 2.2 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein PCI PF01399.22 gi|518653015|ref|YP_008142535.1| - 0.12 12.6 0.8 0.26 11.5 0.1 1.8 2 1 0 2 2 2 0 PCI domain ComJ PF11033.3 gi|518653015|ref|YP_008142535.1| - 0.13 11.9 0.6 0.44 10.1 0.1 2.0 2 1 0 2 2 2 0 Competence protein J (ComJ) AA_permease PF00324.16 gi|518653016|ref|YP_008142536.1| - 1.1e-30 106.4 56.0 1.6e-30 105.9 38.8 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518653016|ref|YP_008142536.1| - 2.8e-19 69.0 64.2 3.5e-19 68.6 44.5 1.1 1 0 0 1 1 1 1 Amino acid permease Aminotran_5 PF00266.14 gi|518653017|ref|YP_008142537.1| - 1.6e-41 142.2 0.0 2.3e-41 141.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|518653017|ref|YP_008142537.1| - 0.00017 20.7 0.0 0.00026 20.1 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SelA PF03841.8 gi|518653017|ref|YP_008142537.1| - 0.015 14.1 0.1 0.021 13.5 0.1 1.2 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Cor1 PF04803.7 gi|518653017|ref|YP_008142537.1| - 0.11 12.3 0.1 0.24 11.1 0.1 1.7 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region HCBP_related PF06594.6 gi|518653017|ref|YP_008142537.1| - 0.18 11.4 0.8 0.37 10.4 0.0 1.9 2 0 0 2 2 2 0 Haemolysin-type calcium binding protein related domain DDE_Tnp_1 PF01609.16 gi|518653019|ref|YP_008142539.1| - 1.5e-13 50.7 2.1 5.6e-13 48.9 1.4 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.1 gi|518653019|ref|YP_008142539.1| - 0.013 15.0 1.2 0.016 14.7 0.1 1.7 2 0 0 2 2 2 0 DDE superfamily endonuclease GSH-S_N PF02951.9 gi|518653019|ref|YP_008142539.1| - 0.015 15.0 0.1 0.035 13.8 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain AMP-binding PF00501.23 gi|518653020|ref|YP_008142540.1| - 1.8e-73 247.3 0.0 2.3e-73 247.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518653020|ref|YP_008142540.1| - 2.6e-14 53.8 0.1 4.9e-14 53.0 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Abhydrolase_6 PF12697.2 gi|518653020|ref|YP_008142540.1| - 0.17 11.7 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family AA_permease_2 PF13520.1 gi|518653021|ref|YP_008142541.1| - 2.8e-36 124.9 62.1 2.8e-36 124.9 43.1 2.1 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518653021|ref|YP_008142541.1| - 9.7e-34 116.5 57.8 9.7e-34 116.5 40.0 2.3 1 1 1 2 2 2 1 Amino acid permease Orn_Arg_deC_N PF02784.11 gi|518653022|ref|YP_008142542.1| - 7.8e-45 153.0 0.0 9.8e-45 152.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|518653022|ref|YP_008142542.1| - 3.4e-18 65.4 0.0 5.3e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DDE_5 PF13546.1 gi|518653023|ref|YP_008142543.1| - 2.1e-12 46.5 0.0 3.2e-10 39.3 0.0 2.2 1 1 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_2 PF04693.7 gi|518653023|ref|YP_008142543.1| - 1.7e-11 43.7 0.8 2.9e-11 42.9 0.6 1.3 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.16 gi|518653023|ref|YP_008142543.1| - 5.5e-11 42.4 0.4 8.1e-11 41.8 0.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain DrsE PF02635.10 gi|518653024|ref|YP_008142544.1| - 0.00011 22.2 0.0 0.00011 22.1 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF167 PF02594.11 gi|518653025|ref|YP_008142545.1| - 1.7e-11 43.8 0.0 1.9e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 PLDc_2 PF13091.1 gi|518653027|ref|YP_008142547.1| - 3.1e-30 104.4 0.3 1.3e-14 53.9 0.0 2.1 2 0 0 2 2 2 2 PLD-like domain DUF814 PF05670.8 gi|518653027|ref|YP_008142547.1| - 0.084 12.7 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF814) SHMT PF00464.14 gi|518653028|ref|YP_008142548.1| - 2.6e-36 124.8 0.0 3.5e-36 124.4 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.12 gi|518653028|ref|YP_008142548.1| - 0.00014 21.0 0.0 0.00026 20.1 0.0 1.4 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|518653028|ref|YP_008142548.1| - 0.00016 20.8 0.0 0.00021 20.5 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase CBS PF00571.23 gi|518653029|ref|YP_008142549.1| - 6.7e-39 131.4 3.5 5.3e-11 42.1 0.0 4.2 4 0 0 4 4 4 4 CBS domain Peptidase_M1 PF01433.15 gi|518653030|ref|YP_008142550.1| - 7.9e-106 354.4 2.4 8.6e-106 354.3 0.5 1.8 2 0 0 2 2 2 1 Peptidase family M1 ERAP1_C PF11838.3 gi|518653030|ref|YP_008142550.1| - 3.6e-17 62.6 0.3 8.8e-17 61.3 0.1 1.7 2 0 0 2 2 2 1 ERAP1-like C-terminal domain Peptidase_MA_2 PF13485.1 gi|518653030|ref|YP_008142550.1| - 9.6e-17 61.2 0.0 1.9e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase MA superfamily Sua5_yciO_yrdC PF01300.13 gi|518653031|ref|YP_008142551.1| - 6.6e-54 181.8 0.0 9.2e-54 181.3 0.0 1.2 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.8 gi|518653031|ref|YP_008142551.1| - 7.4e-25 87.4 0.0 1.1e-24 86.8 0.0 1.3 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding Acetyltransf_7 PF13508.1 gi|518653032|ref|YP_008142552.1| - 4e-10 39.7 0.9 1.6e-08 34.5 0.6 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|518653032|ref|YP_008142552.1| - 5.6e-10 39.1 0.3 2e-09 37.3 0.2 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|518653032|ref|YP_008142552.1| - 4.3e-07 30.0 0.0 5.5e-05 23.2 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518653032|ref|YP_008142552.1| - 0.003 17.2 0.0 0.42 10.3 0.0 2.7 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|518653032|ref|YP_008142552.1| - 0.0041 16.9 0.0 0.0091 15.8 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain CTP_transf_1 PF01148.15 gi|518653033|ref|YP_008142553.1| - 0.014 15.0 39.1 1.9 8.1 27.1 2.8 1 1 0 1 1 1 0 Cytidylyltransferase family Rieske PF00355.21 gi|518653034|ref|YP_008142554.1| - 1e-13 50.6 0.2 1.2e-13 50.4 0.1 1.2 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|518653034|ref|YP_008142554.1| - 2.1e-09 37.0 0.0 3e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FAD_binding_5 PF00941.16 gi|518653035|ref|YP_008142555.1| - 8.7e-53 178.2 0.0 1.3e-52 177.7 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.12 gi|518653035|ref|YP_008142555.1| - 1.7e-18 66.4 0.0 1.2e-17 63.7 0.0 2.0 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.15 gi|518653036|ref|YP_008142556.1| - 1.8e-27 95.0 1.5 4.6e-27 93.7 0.0 2.0 1 1 1 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.22 gi|518653036|ref|YP_008142556.1| - 0.00045 19.9 0.9 0.00045 19.9 0.6 2.0 1 1 1 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.1 gi|518653036|ref|YP_008142556.1| - 0.018 14.8 1.8 0.018 14.8 1.2 1.5 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Cytochrome-c551 PF10643.4 gi|518653036|ref|YP_008142556.1| - 0.1 11.8 0.3 0.13 11.5 0.2 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 Fer2_4 PF13510.1 gi|518653036|ref|YP_008142556.1| - 0.13 12.0 1.6 0.41 10.4 1.1 1.8 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Ald_Xan_dh_C2 PF02738.13 gi|518653037|ref|YP_008142557.1| - 4.5e-87 292.6 0.0 1.4e-72 244.7 0.0 2.1 1 1 1 2 2 2 2 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.17 gi|518653037|ref|YP_008142557.1| - 1.5e-15 57.2 0.1 4.1e-14 52.6 0.1 2.4 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEAD_assoc PF08494.6 gi|518653038|ref|YP_008142558.1| - 1.8e-44 151.7 0.0 3.8e-44 150.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|518653038|ref|YP_008142558.1| - 6.3e-29 100.6 0.0 2.2e-28 98.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518653038|ref|YP_008142558.1| - 2.7e-14 52.7 0.1 1.1e-12 47.6 0.1 2.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|518653038|ref|YP_008142558.1| - 1e-09 38.4 0.0 3.5e-09 36.7 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit TrmB PF01978.14 gi|518653038|ref|YP_008142558.1| - 0.00062 19.4 5.5 0.003 17.2 1.6 3.4 4 0 0 4 4 4 1 Sugar-specific transcriptional regulator TrmB SNF2_N PF00176.18 gi|518653038|ref|YP_008142558.1| - 0.00063 18.6 0.3 0.0027 16.5 0.0 2.1 2 0 0 2 2 2 1 SNF2 family N-terminal domain TFIIE_alpha PF02002.12 gi|518653038|ref|YP_008142558.1| - 0.00083 18.8 7.3 0.02 14.3 0.1 3.0 2 0 0 2 2 2 2 TFIIE alpha subunit DUF2312 PF10073.4 gi|518653038|ref|YP_008142558.1| - 0.019 14.3 1.7 1.2 8.5 0.0 3.2 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) T2SE PF00437.15 gi|518653038|ref|YP_008142558.1| - 0.044 12.6 0.0 0.1 11.4 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein FtsX PF02687.16 gi|518653039|ref|YP_008142559.1| - 0.00013 21.6 4.6 0.00017 21.3 3.2 1.1 1 0 0 1 1 1 1 FtsX-like permease family DctQ PF04290.7 gi|518653039|ref|YP_008142559.1| - 0.017 14.8 0.2 0.02 14.6 0.2 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component CD20 PF04103.10 gi|518653039|ref|YP_008142559.1| - 0.064 13.1 1.2 0.1 12.5 0.8 1.3 1 1 0 1 1 1 0 CD20-like family TrbC PF04956.8 gi|518653039|ref|YP_008142559.1| - 0.93 9.5 7.8 0.47 10.4 0.3 2.2 2 0 0 2 2 2 0 TrbC/VIRB2 family DUF3784 PF12650.2 gi|518653039|ref|YP_008142559.1| - 1.5 8.8 9.7 3.3 7.7 1.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) DUF2371 PF10177.4 gi|518653039|ref|YP_008142559.1| - 1.5 8.6 11.0 66 3.3 7.6 2.0 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) DUF4097 PF13349.1 gi|518653039|ref|YP_008142559.1| - 1.6 8.2 5.9 2.7 7.5 0.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) DUF2583 PF10762.4 gi|518653039|ref|YP_008142559.1| - 2.1 8.5 6.3 2.8 8.1 0.3 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2583) Rab5ip PF07019.7 gi|518653039|ref|YP_008142559.1| - 3.1 8.0 7.4 0.82 9.8 0.5 2.0 1 1 1 2 2 2 0 Rab5-interacting protein (Rab5ip) DUF3185 PF11381.3 gi|518653039|ref|YP_008142559.1| - 3.1 7.6 10.2 0.93 9.3 3.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) DUF202 PF02656.10 gi|518653039|ref|YP_008142559.1| - 3.7 7.8 7.1 3.1 8.0 2.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF202) SdpI PF13630.1 gi|518653039|ref|YP_008142559.1| - 6.7 6.4 13.6 2.9 7.6 1.4 2.1 1 1 1 2 2 2 0 SdpI/YhfL protein family DUF4064 PF13273.1 gi|518653039|ref|YP_008142559.1| - 8.2 6.5 12.3 23 5.1 8.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DEDD_Tnp_IS110 PF01548.12 gi|518653040|ref|YP_008142560.1| - 1.5e-25 89.4 0.0 2.6e-25 88.7 0.0 1.4 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.11 gi|518653040|ref|YP_008142560.1| - 2.4e-24 85.2 0.0 5.2e-24 84.1 0.0 1.6 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family rve PF00665.21 gi|518653041|ref|YP_008142561.1| - 1.2e-12 47.9 0.0 5.5e-12 45.8 0.0 1.9 2 0 0 2 2 2 1 Integrase core domain HTH_29 PF13551.1 gi|518653041|ref|YP_008142561.1| - 0.00021 21.3 0.0 0.00038 20.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|518653041|ref|YP_008142561.1| - 0.00063 20.4 0.0 0.0012 19.5 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_21 PF13276.1 gi|518653041|ref|YP_008142561.1| - 0.012 15.5 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 HTH-like domain HTH_28 PF13518.1 gi|518653041|ref|YP_008142561.1| - 0.013 15.4 2.8 0.015 15.2 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|518653041|ref|YP_008142561.1| - 0.023 14.3 0.1 0.3 10.7 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain HTH_7 PF02796.10 gi|518653041|ref|YP_008142561.1| - 0.75 9.7 3.7 0.46 10.4 0.4 2.3 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase DDE_Tnp_1 PF01609.16 gi|518653042|ref|YP_008142562.1| - 1.3e-20 73.8 0.4 1.8e-20 73.4 0.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518653042|ref|YP_008142562.1| - 5.8e-11 42.3 0.1 9.1e-11 41.7 0.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518653042|ref|YP_008142562.1| - 0.00017 21.7 0.2 0.0004 20.5 0.1 1.7 1 1 1 2 2 2 1 Transposase DDE domain DDE_Tnp_4 PF13359.1 gi|518653042|ref|YP_008142562.1| - 0.0017 17.9 0.1 0.0039 16.7 0.1 1.7 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_Tnp_1_2 PF13586.1 gi|518653042|ref|YP_008142562.1| - 0.016 15.4 0.2 0.043 13.9 0.1 1.9 1 1 0 1 1 1 0 Transposase DDE domain DDE_Tnp_1_6 PF13751.1 gi|518653042|ref|YP_008142562.1| - 0.14 12.1 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Transposase DDE domain BPD_transp_1 PF00528.17 gi|518653044|ref|YP_008142564.1| - 4.5e-31 107.7 12.5 4.5e-31 107.7 8.6 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|518653045|ref|YP_008142565.1| - 2.3e-14 53.3 22.5 2.3e-14 53.3 15.6 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|518653045|ref|YP_008142565.1| - 0.00033 19.9 0.1 0.00033 19.9 0.1 3.3 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.22 gi|518653046|ref|YP_008142566.1| - 3.4e-58 195.7 0.0 6.8e-29 100.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.7 gi|518653046|ref|YP_008142566.1| - 5.8e-35 119.4 0.0 3.4e-17 62.5 0.0 2.6 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|518653046|ref|YP_008142566.1| - 5e-16 59.5 14.5 2e-07 31.3 1.2 4.6 3 2 0 3 3 2 2 AAA domain SMC_N PF02463.14 gi|518653046|ref|YP_008142566.1| - 1e-09 37.9 2.7 0.00097 18.4 0.0 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|518653046|ref|YP_008142566.1| - 2e-08 34.6 0.8 0.002 18.4 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.1 gi|518653046|ref|YP_008142566.1| - 3.6e-08 33.6 3.6 0.00064 19.8 0.1 3.6 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|518653046|ref|YP_008142566.1| - 5e-08 32.3 1.4 0.00031 20.2 0.2 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|518653046|ref|YP_008142566.1| - 2.2e-07 31.6 0.0 0.0011 19.7 0.0 2.9 2 0 0 2 2 2 2 AAA domain PRK PF00485.13 gi|518653046|ref|YP_008142566.1| - 3e-07 30.2 0.1 0.0078 15.7 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.1 gi|518653046|ref|YP_008142566.1| - 8.2e-07 29.1 0.0 0.04 13.8 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain ATP-synt_ab PF00006.20 gi|518653046|ref|YP_008142566.1| - 1.1e-06 28.3 0.1 0.026 14.0 0.0 2.3 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain AAA_33 PF13671.1 gi|518653046|ref|YP_008142566.1| - 1.7e-05 24.7 0.0 0.017 15.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|518653046|ref|YP_008142566.1| - 1.9e-05 24.1 0.9 0.1 12.0 0.0 2.9 2 1 0 2 2 2 2 AAA domain NACHT PF05729.7 gi|518653046|ref|YP_008142566.1| - 2.3e-05 24.1 0.6 0.079 12.6 0.0 2.3 2 0 0 2 2 2 2 NACHT domain DUF258 PF03193.11 gi|518653046|ref|YP_008142566.1| - 2.4e-05 23.5 0.8 0.1 11.8 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|518653046|ref|YP_008142566.1| - 2.4e-05 24.1 0.6 0.00066 19.4 0.0 2.5 2 0 0 2 2 2 1 Archaeal ATPase FtsK_SpoIIIE PF01580.13 gi|518653046|ref|YP_008142566.1| - 4.5e-05 23.0 2.2 0.15 11.4 0.0 2.6 3 0 0 3 3 2 2 FtsK/SpoIIIE family AAA_5 PF07728.9 gi|518653046|ref|YP_008142566.1| - 4.6e-05 23.1 0.1 0.19 11.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MobB PF03205.9 gi|518653046|ref|YP_008142566.1| - 9.7e-05 22.1 1.3 0.026 14.2 0.1 2.8 3 0 0 3 3 2 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|518653046|ref|YP_008142566.1| - 0.00012 21.5 7.1 0.00027 20.3 0.2 3.1 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF87 PF01935.12 gi|518653046|ref|YP_008142566.1| - 0.00023 21.0 5.8 0.12 12.1 1.4 3.2 2 1 0 2 2 2 2 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|518653046|ref|YP_008142566.1| - 0.00023 20.6 3.4 0.35 10.2 0.2 3.1 2 1 1 3 3 3 2 AAA-like domain RNA_helicase PF00910.17 gi|518653046|ref|YP_008142566.1| - 0.00056 20.0 2.3 0.35 11.0 0.0 2.8 2 1 0 2 2 2 1 RNA helicase NB-ARC PF00931.17 gi|518653046|ref|YP_008142566.1| - 0.00058 18.8 0.1 0.77 8.5 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain DUF2075 PF09848.4 gi|518653046|ref|YP_008142566.1| - 0.00061 18.8 1.0 0.69 8.8 0.0 2.5 3 0 0 3 3 2 2 Uncharacterized conserved protein (DUF2075) AAA PF00004.24 gi|518653046|ref|YP_008142566.1| - 0.00065 19.9 0.0 0.29 11.3 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.18 gi|518653046|ref|YP_008142566.1| - 0.0015 18.5 0.3 0.91 9.4 0.0 2.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_23 PF13476.1 gi|518653046|ref|YP_008142566.1| - 0.0018 18.6 15.7 0.0044 17.3 0.6 3.8 2 2 1 4 4 3 2 AAA domain Miro PF08477.8 gi|518653046|ref|YP_008142566.1| - 0.0019 18.7 0.1 1.5 9.3 0.0 2.8 2 0 0 2 2 2 1 Miro-like protein Septin PF00735.13 gi|518653046|ref|YP_008142566.1| - 0.0019 17.2 0.6 0.11 11.4 0.0 2.4 2 0 0 2 2 2 1 Septin AAA_14 PF13173.1 gi|518653046|ref|YP_008142566.1| - 0.0024 17.7 0.3 0.22 11.4 0.1 3.0 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.21 gi|518653046|ref|YP_008142566.1| - 0.0026 17.2 0.1 1.5 8.2 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_30 PF13604.1 gi|518653046|ref|YP_008142566.1| - 0.0033 17.0 0.1 0.15 11.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.15 gi|518653046|ref|YP_008142566.1| - 0.0043 16.7 1.0 2.5 7.7 0.1 2.5 2 1 0 2 2 2 1 Adenylylsulphate kinase UPF0079 PF02367.12 gi|518653046|ref|YP_008142566.1| - 0.0049 16.4 0.5 0.15 11.7 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Mg_chelatase PF01078.16 gi|518653046|ref|YP_008142566.1| - 0.0077 15.4 0.9 0.42 9.7 0.0 2.7 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI G-alpha PF00503.15 gi|518653046|ref|YP_008142566.1| - 0.01 14.5 0.1 1.4 7.5 0.0 2.4 2 0 0 2 2 2 0 G-protein alpha subunit NTPase_1 PF03266.10 gi|518653046|ref|YP_008142566.1| - 0.01 15.5 2.4 1 9.0 0.1 2.8 2 0 0 2 2 2 0 NTPase IstB_IS21 PF01695.12 gi|518653046|ref|YP_008142566.1| - 0.012 15.0 0.1 5.2 6.4 0.0 2.6 2 0 0 2 2 2 0 IstB-like ATP binding protein tRNA_lig_kinase PF08303.6 gi|518653046|ref|YP_008142566.1| - 0.013 15.3 0.2 3.9 7.3 0.0 3.1 3 1 0 3 3 3 0 tRNA ligase kinase domain AAA_24 PF13479.1 gi|518653046|ref|YP_008142566.1| - 0.014 14.9 0.1 1.4 8.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain KaiC PF06745.8 gi|518653046|ref|YP_008142566.1| - 0.02 14.0 3.3 1.2 8.1 0.5 2.8 2 1 0 2 2 2 0 KaiC Thymidylate_kin PF02223.12 gi|518653046|ref|YP_008142566.1| - 0.025 13.9 2.4 2.4 7.5 0.5 2.9 2 1 1 3 3 3 0 Thymidylate kinase ATP_bind_1 PF03029.12 gi|518653046|ref|YP_008142566.1| - 0.026 14.0 0.1 1.3 8.5 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_13 PF13166.1 gi|518653046|ref|YP_008142566.1| - 0.037 12.5 4.2 1.9 6.8 0.1 3.3 3 0 0 3 3 3 0 AAA domain DEAD PF00270.24 gi|518653046|ref|YP_008142566.1| - 0.038 13.4 0.1 20 4.5 0.0 3.5 3 1 0 3 3 3 0 DEAD/DEAH box helicase T2SE PF00437.15 gi|518653046|ref|YP_008142566.1| - 0.069 12.0 2.8 1.3 7.8 0.0 2.9 2 1 0 3 3 3 0 Type II/IV secretion system protein ArgK PF03308.11 gi|518653046|ref|YP_008142566.1| - 0.11 11.2 0.7 6.1 5.5 0.0 2.4 2 0 0 2 2 2 0 ArgK protein cobW PF02492.14 gi|518653046|ref|YP_008142566.1| - 0.48 9.8 2.4 2.3 7.6 0.2 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF2636 PF11120.3 gi|518653047|ref|YP_008142567.1| - 0.12 11.8 5.7 0.27 10.7 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2636) Tetraspannin PF00335.15 gi|518653047|ref|YP_008142567.1| - 0.28 10.4 9.2 0.018 14.2 2.9 1.6 2 0 0 2 2 2 0 Tetraspanin family DUF4181 PF13789.1 gi|518653047|ref|YP_008142567.1| - 0.98 9.3 16.4 0.031 14.1 5.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) DUF4131 PF13567.1 gi|518653047|ref|YP_008142567.1| - 3 7.2 7.6 4.6 6.6 5.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Peptidase_S41 PF03572.13 gi|518653048|ref|YP_008142568.1| - 1.6e-22 79.6 0.0 3.7e-22 78.5 0.0 1.7 1 0 0 1 1 1 1 Peptidase family S41 Tricorn_PDZ PF14685.1 gi|518653048|ref|YP_008142568.1| - 1.7e-18 66.1 0.1 4.1e-18 64.9 0.1 1.7 1 0 0 1 1 1 1 Tricorn protease PDZ domain Tricorn_C1 PF14684.1 gi|518653048|ref|YP_008142568.1| - 1.1e-14 53.9 0.3 2.3e-14 53.0 0.2 1.5 1 0 0 1 1 1 1 Tricorn protease C1 domain PD40 PF07676.7 gi|518653048|ref|YP_008142568.1| - 5.8e-07 29.0 7.3 0.001 18.6 0.0 4.6 5 0 0 5 5 5 2 WD40-like Beta Propeller Repeat PDZ_2 PF13180.1 gi|518653048|ref|YP_008142568.1| - 0.024 14.4 0.5 0.089 12.6 0.3 2.0 1 0 0 1 1 1 0 PDZ domain DPPIV_N PF00930.16 gi|518653048|ref|YP_008142568.1| - 0.026 13.1 5.2 0.25 9.8 0.1 3.9 3 2 2 5 5 5 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region rve PF00665.21 gi|518653049|ref|YP_008142569.1| - 3.2e-23 82.0 0.0 1.1e-22 80.3 0.0 1.8 2 0 0 2 2 2 1 Integrase core domain rve_3 PF13683.1 gi|518653049|ref|YP_008142569.1| - 3e-06 26.6 2.2 7.9e-05 22.1 1.6 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518653049|ref|YP_008142569.1| - 1.3e-05 25.8 1.1 3.8e-05 24.4 0.1 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518653049|ref|YP_008142569.1| - 0.0033 17.5 0.2 0.0059 16.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_24 PF13412.1 gi|518653049|ref|YP_008142569.1| - 0.0045 16.3 0.1 0.017 14.5 0.1 2.0 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|518653049|ref|YP_008142569.1| - 0.011 15.3 0.2 0.032 13.8 0.2 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.1 gi|518653049|ref|YP_008142569.1| - 0.024 14.6 1.3 0.059 13.3 0.9 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Put_DNA-bind_N PF06971.8 gi|518653049|ref|YP_008142569.1| - 0.085 12.6 3.3 0.4 10.4 0.0 2.9 3 0 0 3 3 3 0 Putative DNA-binding protein N-terminus SBP_bac_5 PF00496.17 gi|518653050|ref|YP_008142570.1| - 4.1e-37 127.9 11.4 4.1e-37 127.9 7.9 2.2 3 1 0 3 3 3 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF824 PF05688.6 gi|518653050|ref|YP_008142570.1| - 0.15 11.7 2.2 2.1 8.0 0.0 3.4 3 0 0 3 3 3 0 Salmonella repeat of unknown function (DUF824) DDE_Tnp_1 PF01609.16 gi|518653051|ref|YP_008142571.1| - 3.5e-12 46.3 0.1 6.4e-12 45.4 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain TBPIP PF07106.8 gi|518653051|ref|YP_008142571.1| - 0.012 15.1 1.9 0.029 13.9 1.3 1.5 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Phage_integrase PF00589.17 gi|518653052|ref|YP_008142572.1| - 7.5e-12 45.2 0.2 9.2e-12 44.9 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family YtxH PF12732.2 gi|518653052|ref|YP_008142572.1| - 0.023 15.0 0.1 0.034 14.5 0.1 1.5 1 1 0 1 1 1 0 YtxH-like protein USP7_C2 PF14533.1 gi|518653052|ref|YP_008142572.1| - 0.089 12.2 0.1 0.12 11.7 0.0 1.4 1 1 0 1 1 1 0 Ubiquitin-specific protease C-terminal S-AdoMet_synt_M PF02772.11 gi|518653052|ref|YP_008142572.1| - 0.11 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain LexA_DNA_bind PF01726.11 gi|518653055|ref|YP_008142575.1| - 0.011 15.2 0.0 0.028 13.9 0.0 1.6 1 0 0 1 1 1 0 LexA DNA binding domain Baculo_p24 PF05073.7 gi|518653055|ref|YP_008142575.1| - 0.043 13.3 1.5 0.084 12.4 1.1 1.4 1 0 0 1 1 1 0 Baculovirus P24 capsid protein HTH_27 PF13463.1 gi|518653055|ref|YP_008142575.1| - 0.067 13.5 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain GerE PF00196.14 gi|518653055|ref|YP_008142575.1| - 0.08 12.2 0.1 0.23 10.8 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Viral_cys_rich PF08008.7 gi|518653055|ref|YP_008142575.1| - 0.48 10.0 3.9 0.43 10.1 0.1 2.6 3 0 0 3 3 3 0 Viral cysteine rich Resolvase PF00239.16 gi|518653056|ref|YP_008142576.1| - 7.8e-39 132.7 0.1 1.1e-38 132.3 0.1 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_7 PF02796.10 gi|518653056|ref|YP_008142576.1| - 2.8e-07 30.3 2.0 6.5e-07 29.1 0.6 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.1 gi|518653056|ref|YP_008142576.1| - 5.5e-07 29.0 0.1 1.4e-06 27.7 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|518653056|ref|YP_008142576.1| - 8e-06 25.7 0.2 2.2e-05 24.3 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|518653056|ref|YP_008142576.1| - 0.00051 20.1 0.1 0.0054 16.8 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn helix CENP-B_N PF04218.8 gi|518653056|ref|YP_008142576.1| - 0.00053 19.3 0.6 0.0015 17.9 0.4 1.7 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_38 PF13936.1 gi|518653056|ref|YP_008142576.1| - 0.00054 19.4 4.7 0.0006 19.3 1.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Phage_AlpA PF05930.7 gi|518653056|ref|YP_008142576.1| - 0.00068 19.3 0.0 0.0015 18.1 0.0 1.6 1 0 0 1 1 1 1 Prophage CP4-57 regulatory protein (AlpA) TrmB PF01978.14 gi|518653056|ref|YP_008142576.1| - 0.0016 18.0 0.2 0.0051 16.4 0.1 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.7 gi|518653056|ref|YP_008142576.1| - 0.0036 16.7 0.1 0.0082 15.5 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_17 PF12728.2 gi|518653056|ref|YP_008142576.1| - 0.011 15.9 0.3 0.048 13.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.17 gi|518653056|ref|YP_008142576.1| - 0.012 15.4 0.3 0.045 13.5 0.2 2.0 2 0 0 2 2 2 0 Helix-turn-helix HTH_Tnp_IS630 PF01710.11 gi|518653056|ref|YP_008142576.1| - 0.021 14.4 0.1 0.045 13.4 0.1 1.5 1 0 0 1 1 1 0 Transposase HTH_10 PF04967.7 gi|518653056|ref|YP_008142576.1| - 0.035 13.6 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_24 PF13412.1 gi|518653056|ref|YP_008142576.1| - 0.038 13.3 0.1 0.097 12.0 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_40 PF14493.1 gi|518653056|ref|YP_008142576.1| - 0.049 13.8 0.2 0.17 12.1 0.1 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain UPF0122 PF04297.9 gi|518653056|ref|YP_008142576.1| - 0.074 13.0 1.0 0.37 10.8 0.1 2.3 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like DUF2481 PF10654.4 gi|518653056|ref|YP_008142576.1| - 0.08 12.6 0.1 0.22 11.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) Sigma70_r4 PF04545.11 gi|518653056|ref|YP_008142576.1| - 0.19 11.0 1.1 0.65 9.3 0.1 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 DUF4231 PF14015.1 gi|518653057|ref|YP_008142577.1| - 0.071 13.1 11.1 0.048 13.6 1.4 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF4231) DUF4534 PF15049.1 gi|518653057|ref|YP_008142577.1| - 1.6 8.3 15.7 0.085 12.4 6.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4534) DUF4149 PF13664.1 gi|518653057|ref|YP_008142577.1| - 4.2 7.4 10.8 0.45 10.5 3.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) E1-E2_ATPase PF00122.15 gi|518653057|ref|YP_008142577.1| - 8.5 5.3 14.3 56 2.6 9.9 1.9 1 1 0 1 1 1 0 E1-E2 ATPase ABC2_membrane_2 PF12679.2 gi|518653058|ref|YP_008142578.1| - 0.012 14.5 0.0 0.043 12.6 0.0 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein RseC_MucC PF04246.7 gi|518653058|ref|YP_008142578.1| - 0.13 11.8 3.2 0.11 12.0 1.0 1.7 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Sigma_reg_N PF13800.1 gi|518653059|ref|YP_008142579.1| - 0.015 15.2 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SAND PF01342.16 gi|518653059|ref|YP_008142579.1| - 0.092 12.4 0.1 0.38 10.4 0.1 1.9 2 0 0 2 2 2 0 SAND domain zf-ribbon_3 PF13248.1 gi|518653060|ref|YP_008142580.1| - 1.3e-08 33.7 3.1 2.1e-08 33.1 2.1 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|518653060|ref|YP_008142580.1| - 5.9e-07 28.7 3.8 8.8e-07 28.2 2.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|518653060|ref|YP_008142580.1| - 1.6e-06 27.8 1.8 2.3e-06 27.2 1.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon Penicillinase_R PF03965.11 gi|518653060|ref|YP_008142580.1| - 0.00041 20.4 0.0 0.00055 20.0 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_34 PF13601.1 gi|518653060|ref|YP_008142580.1| - 0.0005 20.0 0.1 0.00068 19.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.12 gi|518653060|ref|YP_008142580.1| - 0.0015 18.0 0.0 0.0019 17.7 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix zf-tcix PF14952.1 gi|518653060|ref|YP_008142580.1| - 0.0044 16.3 2.6 0.0076 15.5 1.8 1.4 1 0 0 1 1 1 1 Putative treble-clef, zinc-finger, Zn-binding zf-RanBP PF00641.13 gi|518653060|ref|YP_008142580.1| - 0.0054 15.8 2.2 0.0084 15.1 1.5 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others TF_Zn_Ribbon PF08271.7 gi|518653060|ref|YP_008142580.1| - 0.0088 15.3 4.4 0.018 14.3 3.0 1.6 1 1 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|518653060|ref|YP_008142580.1| - 0.013 15.1 1.5 0.026 14.1 1.0 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-DHHC PF01529.15 gi|518653060|ref|YP_008142580.1| - 0.013 14.8 0.1 0.013 14.8 0.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Nudix_N_2 PF14803.1 gi|518653060|ref|YP_008142580.1| - 0.045 13.4 2.4 0.57 9.9 0.2 2.2 2 0 0 2 2 2 0 Nudix N-terminal Prok-RING_1 PF14446.1 gi|518653060|ref|YP_008142580.1| - 0.049 13.3 1.9 0.08 12.6 1.3 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 PadR PF03551.9 gi|518653060|ref|YP_008142580.1| - 0.053 13.3 0.1 0.073 12.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family UPF0547 PF10571.4 gi|518653060|ref|YP_008142580.1| - 0.076 12.7 4.6 0.24 11.1 3.2 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 HTH_24 PF13412.1 gi|518653060|ref|YP_008142580.1| - 0.077 12.4 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|518653060|ref|YP_008142580.1| - 0.08 13.2 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain zf-dskA_traR PF01258.12 gi|518653060|ref|YP_008142580.1| - 0.12 12.1 2.1 5.5 6.8 1.4 2.3 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Rad50_zn_hook PF04423.9 gi|518653060|ref|YP_008142580.1| - 0.12 11.8 1.2 0.25 10.8 0.5 1.8 1 1 1 2 2 2 0 Rad50 zinc hook motif zf-NADH-PPase PF09297.6 gi|518653060|ref|YP_008142580.1| - 0.3 10.6 1.9 5.2 6.6 1.3 2.2 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain DUF2256 PF10013.4 gi|518653060|ref|YP_008142580.1| - 0.62 9.8 3.7 3.2 7.5 0.2 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DNA_ligase_ZBD PF03119.11 gi|518653060|ref|YP_008142580.1| - 1.9 8.2 4.3 1.6 8.5 0.2 2.5 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain Phage_integrase PF00589.17 gi|518653062|ref|YP_008142582.1| - 3.2e-12 46.4 0.0 5e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_integrase PF00589.17 gi|518653063|ref|YP_008142583.1| - 0.001 18.7 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Na_H_Exchanger PF00999.16 gi|518653064|ref|YP_008142584.1| - 1.5e-35 122.4 50.6 1.9e-35 122.1 35.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Fun_ATP-synt_8 PF05933.8 gi|518653064|ref|YP_008142584.1| - 0.24 11.4 0.2 0.24 11.4 0.1 4.8 4 1 1 5 5 5 0 Fungal ATP synthase protein 8 (A6L) DUF2456 PF10445.4 gi|518653064|ref|YP_008142584.1| - 4.6 7.2 12.1 6.8 6.6 0.2 4.2 4 0 0 4 4 4 0 Protein of unknown function (DUF2456) NAD_synthase PF02540.12 gi|518653065|ref|YP_008142585.1| - 6.1e-67 225.0 0.2 7.7e-67 224.7 0.1 1.0 1 0 0 1 1 1 1 NAD synthase PAPS_reduct PF01507.14 gi|518653065|ref|YP_008142585.1| - 0.016 15.0 0.0 0.035 13.9 0.0 1.6 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.11 gi|518653065|ref|YP_008142585.1| - 0.018 13.6 0.0 0.048 12.2 0.0 1.7 2 0 0 2 2 2 0 tRNA methyl transferase Asn_synthase PF00733.16 gi|518653065|ref|YP_008142585.1| - 0.074 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase FeoB_N PF02421.13 gi|518653065|ref|YP_008142585.1| - 0.099 11.9 0.1 0.15 11.3 0.1 1.3 1 0 0 1 1 1 0 Ferrous iron transport protein B DUF3930 PF13067.1 gi|518653066|ref|YP_008142586.1| - 0.033 14.0 0.3 0.041 13.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) DUF3311 PF11755.3 gi|518653067|ref|YP_008142587.1| - 8.5e-21 73.2 2.8 9.6e-21 73.0 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) SSF PF00474.12 gi|518653068|ref|YP_008142588.1| - 1.3e-27 96.5 31.2 1.9e-27 95.9 21.7 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family HTH_23 PF13384.1 gi|518653069|ref|YP_008142589.1| - 0.0032 17.0 0.0 0.0064 16.1 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain KorB PF08535.5 gi|518653069|ref|YP_008142589.1| - 0.084 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 KorB domain Thermopsin PF05317.6 gi|518653070|ref|YP_008142590.1| - 1e-62 211.4 16.2 1e-62 211.4 11.2 3.0 2 1 0 2 2 2 1 Thermopsin SH2_2 PF14633.1 gi|518653070|ref|YP_008142590.1| - 0.091 11.8 0.0 0.2 10.7 0.0 1.5 1 0 0 1 1 1 0 SH2 domain NosD PF05048.8 gi|518653070|ref|YP_008142590.1| - 0.64 9.1 35.3 0.12 11.5 19.4 3.5 3 1 0 3 3 3 0 Periplasmic copper-binding protein (NosD) GlutR_N PF05201.10 gi|518653071|ref|YP_008142591.1| - 1.3e-26 93.0 0.8 1.4e-25 89.6 0.1 2.7 2 1 0 2 2 2 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 gi|518653071|ref|YP_008142591.1| - 2.2e-21 76.3 1.5 2.9e-21 75.9 0.1 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.15 gi|518653071|ref|YP_008142591.1| - 3.4e-16 59.0 1.1 7.4e-16 57.9 0.7 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.12 gi|518653071|ref|YP_008142591.1| - 5.4e-08 33.1 0.7 1.3e-07 31.9 0.1 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.16 gi|518653071|ref|YP_008142591.1| - 0.0018 18.1 2.3 0.12 12.1 0.1 2.3 2 0 0 2 2 2 2 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|518653071|ref|YP_008142591.1| - 0.0029 16.7 0.5 0.0058 15.7 0.1 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|518653071|ref|YP_008142591.1| - 0.034 14.4 0.2 0.11 12.7 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding DUF1456 PF07308.8 gi|518653071|ref|YP_008142591.1| - 0.035 14.1 3.4 0.65 10.0 0.8 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) NAD_binding_2 PF03446.10 gi|518653071|ref|YP_008142591.1| - 0.098 12.4 0.5 0.22 11.3 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase DUF1673 PF07895.6 gi|518653072|ref|YP_008142592.1| - 0.02 14.4 2.7 0.022 14.3 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) DUF4293 PF14126.1 gi|518653072|ref|YP_008142592.1| - 0.029 14.3 1.2 0.03 14.2 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) DUF4191 PF13829.1 gi|518653072|ref|YP_008142592.1| - 0.18 10.9 0.5 0.19 10.8 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Radical_SAM PF04055.16 gi|518653073|ref|YP_008142593.1| - 2.6e-08 34.1 0.0 3.7e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|518653073|ref|YP_008142593.1| - 0.1 12.7 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain JmjN PF02375.12 gi|518653073|ref|YP_008142593.1| - 1.4 8.4 4.4 1.3 8.5 0.2 2.9 3 1 0 3 3 3 0 jmjN domain MFS_1 PF07690.11 gi|518653074|ref|YP_008142594.1| - 3.1e-23 82.0 60.8 4.6e-20 71.6 28.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Selenoprotein_S PF06936.6 gi|518653074|ref|YP_008142594.1| - 0.16 11.4 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) DUF2080 PF09853.4 gi|518653076|ref|YP_008142596.1| - 4.7e-14 51.8 0.3 5e-14 51.7 0.2 1.0 1 0 0 1 1 1 1 Putative transposon-encoded protein (DUF2080) DUF488 PF04343.8 gi|518653077|ref|YP_008142597.1| - 0.039 14.3 0.3 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF488 Transp_cyt_pur PF02133.10 gi|518653078|ref|YP_008142598.1| - 4.8e-10 38.5 35.4 2.4e-09 36.2 24.6 1.8 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin DDE_Tnp_1 PF01609.16 gi|518653079|ref|YP_008142599.1| - 7.4e-21 74.6 0.7 1e-20 74.2 0.5 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518653079|ref|YP_008142599.1| - 1.5e-10 41.0 0.2 2.4e-10 40.3 0.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518653079|ref|YP_008142599.1| - 0.00018 21.6 0.1 0.00039 20.5 0.1 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.1 gi|518653079|ref|YP_008142599.1| - 0.011 15.2 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 0 DDE superfamily endonuclease DDE_Tnp_1_2 PF13586.1 gi|518653079|ref|YP_008142599.1| - 0.017 15.3 0.2 0.045 13.9 0.1 1.9 1 1 0 1 1 1 0 Transposase DDE domain DDE_Tnp_1_6 PF13751.1 gi|518653079|ref|YP_008142599.1| - 0.083 12.8 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Transposase DDE domain Peptidase_S41 PF03572.13 gi|518653080|ref|YP_008142600.1| - 6.7e-22 77.6 0.2 1.8e-21 76.3 0.0 1.9 2 0 0 2 2 2 1 Peptidase family S41 Tricorn_PDZ PF14685.1 gi|518653080|ref|YP_008142600.1| - 2.9e-18 65.4 0.1 6e-18 64.4 0.1 1.5 1 0 0 1 1 1 1 Tricorn protease PDZ domain Tricorn_C1 PF14684.1 gi|518653080|ref|YP_008142600.1| - 1.1e-14 54.0 0.3 1.1e-14 54.0 0.2 1.8 2 0 0 2 2 2 1 Tricorn protease C1 domain PD40 PF07676.7 gi|518653080|ref|YP_008142600.1| - 2.4e-05 23.8 12.8 0.054 13.1 0.0 6.1 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat eIF2A PF08662.6 gi|518653080|ref|YP_008142600.1| - 0.00064 19.4 3.3 0.047 13.3 0.0 3.0 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A DPPIV_N PF00930.16 gi|518653080|ref|YP_008142600.1| - 0.0058 15.2 3.7 0.12 10.8 0.1 3.9 3 2 1 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_3 PF13415.1 gi|518653080|ref|YP_008142600.1| - 0.14 12.3 0.5 28 5.0 0.1 3.2 3 0 0 3 3 3 0 Galactose oxidase, central domain PRK PF00485.13 gi|518653081|ref|YP_008142601.1| - 4.5e-14 52.4 0.0 1e-13 51.2 0.0 1.6 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_17 PF13207.1 gi|518653081|ref|YP_008142601.1| - 6e-06 27.0 0.1 1.5e-05 25.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|518653081|ref|YP_008142601.1| - 0.001 19.3 0.7 0.003 17.8 0.1 2.1 1 1 0 2 2 2 1 AAA domain CoaE PF01121.15 gi|518653081|ref|YP_008142601.1| - 0.028 13.7 0.0 0.052 12.9 0.0 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase Nuc_deoxyrib_tr PF05014.10 gi|518653082|ref|YP_008142602.1| - 7.2e-21 74.1 0.0 8.5e-21 73.9 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase IU_nuc_hydro PF01156.14 gi|518653083|ref|YP_008142603.1| - 2.3e-58 197.9 0.0 2.6e-58 197.6 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase DUF1500 PF07389.7 gi|518653083|ref|YP_008142603.1| - 0.031 14.2 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1500) adh_short PF00106.20 gi|518653084|ref|YP_008142604.1| - 7.2e-31 107.3 0.0 8.9e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518653084|ref|YP_008142604.1| - 1.6e-24 87.0 0.3 1.8e-24 86.8 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518653084|ref|YP_008142604.1| - 1.1e-17 64.2 0.0 1.5e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|518653084|ref|YP_008142604.1| - 0.028 13.8 0.2 0.094 12.1 0.0 1.9 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family AAA_17 PF13207.1 gi|518653084|ref|YP_008142604.1| - 0.068 13.9 0.1 0.58 10.9 0.1 2.1 2 1 0 2 2 2 0 AAA domain Phage_portal_2 PF05136.8 gi|518653084|ref|YP_008142604.1| - 0.14 10.6 0.1 0.52 8.7 0.0 1.8 2 0 0 2 2 2 0 Phage portal protein, lambda family AMP-binding PF00501.23 gi|518653085|ref|YP_008142605.1| - 4.6e-62 209.7 0.0 5.8e-62 209.4 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|518653085|ref|YP_008142605.1| - 9.1e-16 58.5 0.1 2.2e-15 57.3 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Thiolase_C PF02803.13 gi|518653086|ref|YP_008142606.1| - 0.0052 16.2 0.0 0.16 11.4 0.0 2.3 2 0 0 2 2 2 2 Thiolase, C-terminal domain DUF35_N PF12172.3 gi|518653087|ref|YP_008142607.1| - 5.7e-07 29.2 0.2 7.8e-07 28.8 0.2 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF35 PF01796.12 gi|518653087|ref|YP_008142607.1| - 0.00034 20.7 0.0 0.0035 17.5 0.0 2.1 1 1 0 1 1 1 1 DUF35 OB-fold domain Lar_restr_allev PF14354.1 gi|518653087|ref|YP_008142607.1| - 0.0074 16.5 1.0 0.51 10.6 0.0 2.2 1 1 1 2 2 2 1 Restriction alleviation protein Lar zf-C2HC5 PF06221.8 gi|518653087|ref|YP_008142607.1| - 0.049 13.3 1.7 0.089 12.5 1.2 1.4 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type DUF1247 PF06851.6 gi|518653087|ref|YP_008142607.1| - 0.085 12.5 0.2 0.099 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) Spt4 PF06093.8 gi|518653087|ref|YP_008142607.1| - 0.087 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger HypA PF01155.14 gi|518653087|ref|YP_008142607.1| - 0.095 12.3 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family FdhE PF04216.7 gi|518653087|ref|YP_008142607.1| - 0.13 11.9 0.1 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zinc_ribbon_2 PF13240.1 gi|518653087|ref|YP_008142607.1| - 0.37 10.3 3.1 7.1 6.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Sgf11 PF08209.6 gi|518653087|ref|YP_008142607.1| - 0.6 9.4 2.8 1.6 8.1 0.1 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-ribbon_3 PF13248.1 gi|518653087|ref|YP_008142607.1| - 1 8.6 5.5 10 5.4 3.9 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DHDPS PF00701.17 gi|518653088|ref|YP_008142608.1| - 5.2e-45 153.2 0.0 6e-45 153.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Aconitase PF00330.15 gi|518653089|ref|YP_008142609.1| - 7.2e-126 420.3 0.0 3.6e-125 418.0 0.0 1.8 2 0 0 2 2 2 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|518653089|ref|YP_008142609.1| - 4e-34 117.5 0.0 8.3e-34 116.5 0.0 1.6 1 0 0 1 1 1 1 Aconitase C-terminal domain Acetyltransf_1 PF00583.19 gi|518653090|ref|YP_008142610.1| - 3.5e-11 42.9 0.0 5.2e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|518653090|ref|YP_008142610.1| - 3.5e-10 39.9 0.0 5.5e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|518653090|ref|YP_008142610.1| - 8.6e-10 38.7 0.9 1e-09 38.5 0.7 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|518653090|ref|YP_008142610.1| - 3.4e-09 36.8 0.0 3.9e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|518653090|ref|YP_008142610.1| - 0.0003 20.4 0.0 0.0013 18.4 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|518653090|ref|YP_008142610.1| - 0.0086 15.9 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Malic_M PF03949.10 gi|518653091|ref|YP_008142611.1| - 3.9e-61 206.8 0.1 4.9e-61 206.5 0.1 1.1 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.14 gi|518653091|ref|YP_008142611.1| - 3.8e-20 72.2 0.3 5.6e-15 55.3 0.3 2.7 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain Plasmid_Txe PF06769.8 gi|518653091|ref|YP_008142611.1| - 0.077 12.8 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Plasmid encoded toxin Txe 2-Hacid_dh_C PF02826.14 gi|518653092|ref|YP_008142612.1| - 3.4e-40 137.0 0.0 4.5e-40 136.6 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|518653092|ref|YP_008142612.1| - 2.7e-07 30.1 0.0 3.3e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.12 gi|518653092|ref|YP_008142612.1| - 0.0014 18.9 0.2 0.014 15.8 0.0 2.4 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|518653092|ref|YP_008142612.1| - 0.0024 17.7 0.0 0.0052 16.6 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.7 gi|518653092|ref|YP_008142612.1| - 0.017 14.4 0.0 0.049 13.0 0.0 1.7 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain YrzO PF14142.1 gi|518653092|ref|YP_008142612.1| - 0.39 10.3 0.1 0.39 10.3 0.1 2.0 2 0 0 2 2 2 0 YrzO-like protein DEAD PF00270.24 gi|518653093|ref|YP_008142613.1| - 1e-47 161.7 0.2 2.6e-47 160.4 0.1 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|518653093|ref|YP_008142613.1| - 1.6e-22 79.1 0.2 1.6e-22 79.1 0.1 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.1 gi|518653093|ref|YP_008142613.1| - 0.00032 19.8 0.1 0.00085 18.4 0.0 1.7 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit ResIII PF04851.10 gi|518653093|ref|YP_008142613.1| - 0.003 17.4 0.1 0.0066 16.2 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.11 gi|518653093|ref|YP_008142613.1| - 0.04 13.1 0.7 0.097 11.8 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein FERM_C PF09380.5 gi|518653094|ref|YP_008142614.1| - 0.14 12.3 1.5 0.34 11.1 0.2 2.1 1 1 1 2 2 2 0 FERM C-terminal PH-like domain Aldo_ket_red PF00248.16 gi|518653095|ref|YP_008142615.1| - 9.4e-61 205.1 0.0 1.1e-60 204.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family ATP-grasp_2 PF08442.5 gi|518653096|ref|YP_008142616.1| - 5.2e-50 169.6 0.4 1e-49 168.6 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.14 gi|518653096|ref|YP_008142616.1| - 8e-11 41.7 0.1 1.8e-10 40.6 0.0 1.6 1 0 0 1 1 1 1 CoA-ligase CPSase_L_D2 PF02786.12 gi|518653096|ref|YP_008142616.1| - 7.9e-06 25.3 0.0 2.1e-05 23.9 0.0 1.7 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_5 PF13549.1 gi|518653096|ref|YP_008142616.1| - 5.6e-05 22.4 0.1 0.00097 18.4 0.1 2.3 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|518653096|ref|YP_008142616.1| - 0.0082 15.8 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain CoA_binding PF02629.14 gi|518653097|ref|YP_008142617.1| - 2e-25 89.1 0.7 2e-25 89.1 0.5 2.3 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.14 gi|518653097|ref|YP_008142617.1| - 1.8e-17 63.3 0.4 3.1e-17 62.6 0.3 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.1 gi|518653097|ref|YP_008142617.1| - 2.1e-08 33.8 0.0 3.3e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|518653097|ref|YP_008142617.1| - 2.6e-05 24.3 0.0 7.3e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain GFO_IDH_MocA PF01408.17 gi|518653097|ref|YP_008142617.1| - 7.3e-05 23.2 0.1 0.00069 20.1 0.0 2.4 3 0 0 3 3 3 1 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.7 gi|518653097|ref|YP_008142617.1| - 0.00062 19.1 0.9 0.0012 18.2 0.6 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain POR_N PF01855.14 gi|518653099|ref|YP_008142619.1| - 2.4e-57 194.1 0.0 3.4e-57 193.6 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|518653099|ref|YP_008142619.1| - 2.9e-36 124.9 0.1 2.1e-35 122.1 0.0 2.2 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Transketolase_C PF02780.15 gi|518653099|ref|YP_008142619.1| - 1.1e-08 35.0 0.0 2.4e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 gi|518653099|ref|YP_008142619.1| - 2.8e-06 26.9 0.1 7.5e-06 25.5 0.1 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518653100|ref|YP_008142620.1| - 1.7e-30 105.6 0.0 4.1e-30 104.3 0.0 1.6 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|518653100|ref|YP_008142620.1| - 1e-14 54.2 0.4 9.5e-14 51.0 0.3 2.2 1 1 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal Dsl1_C PF11989.3 gi|518653101|ref|YP_008142621.1| - 0.082 12.0 0.2 0.089 11.9 0.2 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 C terminal CCG PF02754.11 gi|518653102|ref|YP_008142622.1| - 2.5e-32 110.7 0.6 1.1e-16 60.5 0.1 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Fer2_3 PF13085.1 gi|518653103|ref|YP_008142623.1| - 4.5e-28 97.2 0.5 9.8e-28 96.1 0.1 1.8 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 gi|518653103|ref|YP_008142623.1| - 3.2e-12 46.2 5.2 3.2e-12 46.2 3.6 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518653103|ref|YP_008142623.1| - 1.1e-10 41.1 15.1 5.6e-09 35.6 4.0 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|518653103|ref|YP_008142623.1| - 1.7e-10 41.0 14.7 4.4e-09 36.5 4.5 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|518653103|ref|YP_008142623.1| - 1.9e-08 33.5 18.6 1e-05 24.8 2.0 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|518653103|ref|YP_008142623.1| - 6.3e-07 29.6 8.4 6.3e-07 29.6 5.8 2.7 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518653103|ref|YP_008142623.1| - 2.1e-06 27.9 16.0 0.0012 19.0 0.4 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|518653103|ref|YP_008142623.1| - 1.9e-05 24.3 17.7 0.00075 19.2 1.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518653103|ref|YP_008142623.1| - 7.6e-05 22.4 13.2 0.0078 16.0 0.4 3.2 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|518653103|ref|YP_008142623.1| - 0.00034 20.9 8.6 0.014 15.7 0.5 3.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_6 PF12837.2 gi|518653103|ref|YP_008142623.1| - 0.00036 20.2 18.6 0.0069 16.2 2.0 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|518653103|ref|YP_008142623.1| - 0.00038 20.8 14.3 0.0032 17.8 0.5 3.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|518653103|ref|YP_008142623.1| - 0.00091 19.7 7.6 0.029 14.9 0.2 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|518653103|ref|YP_008142623.1| - 0.0048 17.1 20.8 0.011 16.0 0.9 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|518653103|ref|YP_008142623.1| - 0.0061 17.2 16.2 0.036 14.8 8.2 3.5 2 1 2 4 4 4 3 4Fe-4S double cluster binding domain Fer2 PF00111.22 gi|518653103|ref|YP_008142623.1| - 0.026 14.2 0.2 0.026 14.2 0.1 2.7 2 1 1 3 3 2 0 2Fe-2S iron-sulfur cluster binding domain Fer4_20 PF14691.1 gi|518653103|ref|YP_008142623.1| - 0.11 12.1 7.5 0.53 9.9 0.1 2.9 3 0 0 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DUF1358 PF07096.6 gi|518653103|ref|YP_008142623.1| - 0.11 12.1 0.0 0.64 9.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1358) Fer4_3 PF12798.2 gi|518653103|ref|YP_008142623.1| - 1.3 9.7 26.9 0.26 11.9 3.1 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain FAD_binding_2 PF00890.19 gi|518653104|ref|YP_008142624.1| - 2e-95 320.0 0.2 2.9e-95 319.5 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 gi|518653104|ref|YP_008142624.1| - 8.3e-46 155.0 0.2 1.3e-45 154.4 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term DAO PF01266.19 gi|518653104|ref|YP_008142624.1| - 2.9e-05 23.1 0.3 8e-05 21.7 0.2 1.8 1 1 1 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|518653104|ref|YP_008142624.1| - 4.3e-05 23.4 0.2 0.0018 18.1 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|518653104|ref|YP_008142624.1| - 0.00068 18.7 0.1 0.048 12.7 0.1 3.1 3 0 0 3 3 3 1 Thi4 family FAD_binding_3 PF01494.14 gi|518653104|ref|YP_008142624.1| - 0.0036 16.4 0.4 0.0058 15.7 0.3 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|518653104|ref|YP_008142624.1| - 0.0078 14.7 1.9 0.023 13.1 1.2 1.8 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|518653104|ref|YP_008142624.1| - 0.11 12.5 0.7 0.42 10.6 0.5 2.1 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|518653104|ref|YP_008142624.1| - 0.68 8.7 3.0 1.3 7.7 2.1 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A Ldh_1_N PF00056.18 gi|518653105|ref|YP_008142625.1| - 1e-39 135.5 0.5 1.7e-39 134.8 0.3 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|518653105|ref|YP_008142625.1| - 1.3e-27 96.6 0.0 2.1e-27 95.9 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.11 gi|518653105|ref|YP_008142625.1| - 4e-05 23.0 0.1 0.00022 20.5 0.0 2.0 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase NAD_binding_8 PF13450.1 gi|518653105|ref|YP_008142625.1| - 0.0011 18.8 0.1 0.0034 17.3 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.13 gi|518653105|ref|YP_008142625.1| - 0.0065 16.1 1.2 0.039 13.6 0.2 2.4 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.16 gi|518653105|ref|YP_008142625.1| - 0.0079 16.0 0.2 0.018 14.8 0.1 1.6 1 0 0 1 1 1 1 ThiF family NAD_Gly3P_dh_N PF01210.18 gi|518653105|ref|YP_008142625.1| - 0.0089 15.7 0.1 0.026 14.2 0.0 1.8 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|518653105|ref|YP_008142625.1| - 0.015 15.1 0.2 3.3 7.5 0.0 2.3 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.15 gi|518653105|ref|YP_008142625.1| - 0.032 14.3 0.3 0.1 12.7 0.2 1.9 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|518653105|ref|YP_008142625.1| - 0.048 13.0 1.2 0.1 11.9 0.8 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FGGY_C PF02782.11 gi|518653105|ref|YP_008142625.1| - 0.078 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain SOR_SNZ PF01680.12 gi|518653106|ref|YP_008142626.1| - 6.6e-97 323.1 4.4 6e-96 320.0 1.7 2.1 1 1 0 2 2 2 1 SOR/SNZ family ThiG PF05690.9 gi|518653106|ref|YP_008142626.1| - 3.6e-12 45.8 1.7 1.2e-08 34.3 0.0 2.6 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG OMPdecase PF00215.19 gi|518653106|ref|YP_008142626.1| - 1.9e-05 24.2 0.3 4.8e-05 22.8 0.0 1.8 2 0 0 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family IGPS PF00218.16 gi|518653106|ref|YP_008142626.1| - 0.00055 19.0 0.1 0.0078 15.2 0.0 2.1 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase Dus PF01207.12 gi|518653106|ref|YP_008142626.1| - 0.0012 17.7 0.0 0.053 12.3 0.0 2.2 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) NanE PF04131.9 gi|518653106|ref|YP_008142626.1| - 0.0014 17.6 0.4 0.012 14.5 0.0 2.5 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase Trp_syntA PF00290.15 gi|518653106|ref|YP_008142626.1| - 0.0017 16.9 0.0 0.0036 15.8 0.0 1.5 1 0 0 1 1 1 1 Tryptophan synthase alpha chain NMO PF03060.10 gi|518653106|ref|YP_008142626.1| - 0.0044 16.2 0.8 0.044 12.9 0.0 2.4 2 1 0 2 2 2 1 Nitronate monooxygenase PcrB PF01884.12 gi|518653106|ref|YP_008142626.1| - 0.026 13.7 0.1 0.077 12.2 0.0 1.9 2 0 0 2 2 2 0 PcrB family His_biosynth PF00977.16 gi|518653106|ref|YP_008142626.1| - 0.026 13.7 0.2 0.32 10.2 0.0 2.6 2 1 1 3 3 3 0 Histidine biosynthesis protein FMN_dh PF01070.13 gi|518653106|ref|YP_008142626.1| - 0.054 12.3 0.0 0.096 11.5 0.0 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase SNO PF01174.14 gi|518653107|ref|YP_008142627.1| - 9.5e-53 178.6 0.1 1.1e-52 178.3 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.9 gi|518653107|ref|YP_008142627.1| - 6.1e-08 32.4 0.4 8.4e-08 31.9 0.3 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.12 gi|518653107|ref|YP_008142627.1| - 1.1e-05 25.2 0.3 1.4e-05 24.8 0.2 1.4 1 1 0 1 1 1 1 Peptidase family S51 GATase PF00117.23 gi|518653107|ref|YP_008142627.1| - 0.0067 15.9 0.3 0.052 12.9 0.2 1.9 1 1 0 1 1 1 1 Glutamine amidotransferase class-I HTH_Tnp_IS1 PF12759.2 gi|518653107|ref|YP_008142627.1| - 0.012 15.0 0.1 0.031 13.7 0.0 1.6 1 0 0 1 1 1 0 InsA C-terminal domain DUF3792 PF12670.2 gi|518653107|ref|YP_008142627.1| - 0.074 12.9 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) DUF4066 PF13278.1 gi|518653107|ref|YP_008142627.1| - 0.087 12.0 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 Putative amidotransferase BacteriocIIc_cy PF12173.3 gi|518653108|ref|YP_008142628.1| - 0.0084 16.1 2.7 0.0089 16.0 1.9 1.0 1 0 0 1 1 1 1 Bacteriocin class IIc cyclic gassericin A-like DUF2834 PF11196.3 gi|518653108|ref|YP_008142628.1| - 0.092 12.9 2.1 0.1 12.7 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) DUF2975 PF11188.3 gi|518653108|ref|YP_008142628.1| - 0.14 11.8 4.7 0.18 11.5 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF2976 PF11190.3 gi|518653108|ref|YP_008142628.1| - 1.7 8.2 9.0 3 7.4 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) DUF296 PF03479.10 gi|518653109|ref|YP_008142629.1| - 1.7e-19 69.5 0.0 2e-19 69.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF296) Radical_SAM PF04055.16 gi|518653110|ref|YP_008142630.1| - 1.8e-17 64.0 0.1 2.7e-17 63.4 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|518653110|ref|YP_008142630.1| - 3.4e-16 59.3 0.0 5.1e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|518653110|ref|YP_008142630.1| - 1.5e-08 34.8 0.3 2.3e-08 34.2 0.1 1.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain DASH_Dad1 PF08649.5 gi|518653110|ref|YP_008142630.1| - 0.11 12.2 0.8 0.54 10.0 0.1 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad1 GTP_cyclohydroI PF01227.17 gi|518653111|ref|YP_008142631.1| - 2.2e-46 157.4 0.0 2.3e-46 157.3 0.0 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.1 gi|518653111|ref|YP_008142631.1| - 0.03 14.2 0.0 0.069 13.0 0.0 1.6 1 0 0 1 1 1 0 QueF-like protein PTPS PF01242.14 gi|518653112|ref|YP_008142632.1| - 2.7e-25 88.4 0.0 3.4e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase XdhC_C PF13478.1 gi|518653113|ref|YP_008142633.1| - 3.7e-12 46.7 0.0 2.3e-11 44.1 0.0 2.0 2 0 0 2 2 2 1 XdhC Rossmann domain XdhC_CoxI PF02625.11 gi|518653113|ref|YP_008142633.1| - 7.1e-08 31.9 0.0 1e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 XdhC and CoxI family PNP_UDP_1 PF01048.15 gi|518653114|ref|YP_008142634.1| - 4.9e-20 71.5 0.0 5.7e-20 71.2 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily GFO_IDH_MocA PF01408.17 gi|518653115|ref|YP_008142635.1| - 1.7e-20 73.7 0.1 2.4e-20 73.2 0.1 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|518653115|ref|YP_008142635.1| - 9.4e-07 28.6 0.1 3.3e-06 26.8 0.1 1.9 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.12 gi|518653115|ref|YP_008142635.1| - 0.012 16.0 0.1 0.021 15.2 0.1 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.13 gi|518653115|ref|YP_008142635.1| - 0.055 13.4 0.1 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain CoA_binding PF02629.14 gi|518653115|ref|YP_008142635.1| - 0.11 12.9 0.3 0.22 12.0 0.2 1.5 1 0 0 1 1 1 0 CoA binding domain Lactamase_B_2 PF12706.2 gi|518653117|ref|YP_008142637.1| - 5.6e-27 94.5 0.2 6.7e-27 94.3 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|518653117|ref|YP_008142637.1| - 4.1e-17 62.4 0.0 5.7e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|518653117|ref|YP_008142637.1| - 1.7e-07 31.0 0.3 5.5e-07 29.4 0.2 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF3046 PF11248.3 gi|518653117|ref|YP_008142637.1| - 0.072 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3046) HAD_2 PF13419.1 gi|518653118|ref|YP_008142638.1| - 1.2e-11 45.1 0.0 1.6e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|518653118|ref|YP_008142638.1| - 2.9e-09 37.6 0.0 1.4e-08 35.3 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|518653118|ref|YP_008142638.1| - 3.2e-08 33.1 0.1 1e-07 31.5 0.0 1.8 1 1 1 2 2 2 1 HAD-hyrolase-like HAD PF12710.2 gi|518653118|ref|YP_008142638.1| - 3e-07 30.8 0.0 4.3e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase 3HCDH_N PF02737.13 gi|518653119|ref|YP_008142639.1| - 3.1e-49 167.0 0.1 4.8e-37 127.3 0.0 2.1 1 1 1 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|518653119|ref|YP_008142639.1| - 2e-34 117.8 0.1 4e-34 116.8 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.10 gi|518653119|ref|YP_008142639.1| - 1.3e-05 25.0 0.1 8.9e-05 22.3 0.0 1.9 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|518653119|ref|YP_008142639.1| - 0.00041 20.7 0.0 0.00096 19.5 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|518653119|ref|YP_008142639.1| - 0.0012 18.5 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.9 gi|518653119|ref|YP_008142639.1| - 0.011 15.6 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.15 gi|518653119|ref|YP_008142639.1| - 0.011 15.7 0.2 0.053 13.6 0.0 2.0 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|518653119|ref|YP_008142639.1| - 0.043 12.9 0.0 0.071 12.2 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|518653119|ref|YP_008142639.1| - 0.047 13.1 0.5 0.14 11.5 0.4 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA zf-TFIIB PF13453.1 gi|518653120|ref|YP_008142640.1| - 0.00018 20.6 0.2 0.00023 20.2 0.1 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger zf-H2C2_2 PF13465.1 gi|518653120|ref|YP_008142640.1| - 0.00022 21.3 0.7 0.014 15.6 0.1 2.3 2 0 0 2 2 2 1 Zinc-finger double domain DUF35_N PF12172.3 gi|518653120|ref|YP_008142640.1| - 0.00065 19.5 2.2 0.014 15.2 0.1 2.1 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF164 PF02591.10 gi|518653120|ref|YP_008142640.1| - 0.00071 19.3 0.3 0.53 10.1 0.0 2.2 2 0 0 2 2 2 1 Putative zinc ribbon domain zf-ribbon_3 PF13248.1 gi|518653120|ref|YP_008142640.1| - 0.00094 18.3 2.4 0.035 13.3 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zf-ISL3 PF14690.1 gi|518653120|ref|YP_008142640.1| - 0.001 19.0 0.4 0.32 11.0 0.1 2.2 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-RING_3 PF14369.1 gi|518653120|ref|YP_008142640.1| - 0.0015 18.4 0.9 1.4 8.9 0.1 2.2 2 0 0 2 2 2 2 zinc-finger A2L_zn_ribbon PF08792.5 gi|518653120|ref|YP_008142640.1| - 0.0018 17.6 2.3 0.61 9.6 0.2 2.5 2 1 0 2 2 2 2 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|518653120|ref|YP_008142640.1| - 0.0022 17.7 0.1 2.2 8.1 0.0 2.1 2 0 0 2 2 2 2 Transposase zinc-ribbon domain UPF0547 PF10571.4 gi|518653120|ref|YP_008142640.1| - 0.0026 17.3 2.3 1.1 9.0 0.2 2.2 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.5 gi|518653120|ref|YP_008142640.1| - 0.0034 17.3 0.5 2.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain CpXC PF14353.1 gi|518653120|ref|YP_008142640.1| - 0.0038 17.1 1.2 0.046 13.6 0.9 2.0 1 1 1 2 2 2 1 CpXC protein Nudix_N_2 PF14803.1 gi|518653120|ref|YP_008142640.1| - 0.0042 16.7 2.7 0.08 12.6 0.2 2.2 2 0 0 2 2 2 1 Nudix N-terminal zf-C2H2_jaz PF12171.3 gi|518653120|ref|YP_008142640.1| - 0.0052 16.8 0.8 0.084 13.0 0.0 2.2 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.21 gi|518653120|ref|YP_008142640.1| - 0.0054 17.0 2.6 0.077 13.3 0.3 2.3 2 0 0 2 2 2 1 Zinc finger, C2H2 type DZR PF12773.2 gi|518653120|ref|YP_008142640.1| - 0.0058 16.4 0.5 0.011 15.4 0.3 1.5 1 1 0 1 1 1 1 Double zinc ribbon zf-FCS PF06467.9 gi|518653120|ref|YP_008142640.1| - 0.0065 16.0 2.1 0.52 9.9 0.1 2.2 1 1 1 2 2 2 1 MYM-type Zinc finger with FCS sequence motif TF_Zn_Ribbon PF08271.7 gi|518653120|ref|YP_008142640.1| - 0.0073 15.6 1.7 0.092 12.0 0.1 2.2 2 0 0 2 2 2 1 TFIIB zinc-binding Mut7-C PF01927.11 gi|518653120|ref|YP_008142640.1| - 0.0074 16.2 0.0 0.008 16.1 0.0 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain TerY-C PF15616.1 gi|518653120|ref|YP_008142640.1| - 0.0082 16.0 0.1 0.011 15.6 0.1 1.3 1 0 0 1 1 1 1 TerY-C metal binding domain zf-C4_Topoisom PF01396.14 gi|518653120|ref|YP_008142640.1| - 0.012 15.0 0.6 2 7.9 0.0 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger PhnA_Zn_Ribbon PF08274.7 gi|518653120|ref|YP_008142640.1| - 0.014 15.2 3.4 0.064 13.0 2.4 1.9 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-Mss51 PF13824.1 gi|518653120|ref|YP_008142640.1| - 0.014 15.2 1.0 0.026 14.3 0.7 1.4 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Ogr_Delta PF04606.7 gi|518653120|ref|YP_008142640.1| - 0.015 14.9 1.1 0.047 13.3 0.8 1.7 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger Rubredoxin PF00301.15 gi|518653120|ref|YP_008142640.1| - 0.018 14.9 0.2 1.8 8.5 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin zinc_ribbon_5 PF13719.1 gi|518653120|ref|YP_008142640.1| - 0.02 14.4 1.3 2.6 7.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|518653120|ref|YP_008142640.1| - 0.025 14.0 5.4 0.11 12.0 3.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518653120|ref|YP_008142640.1| - 0.025 14.2 1.2 3.3 7.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF1610 PF07754.6 gi|518653120|ref|YP_008142640.1| - 0.026 14.6 0.7 0.026 14.6 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) ADK_lid PF05191.9 gi|518653120|ref|YP_008142640.1| - 0.032 13.9 1.4 0.24 11.0 0.3 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid Ribosomal_L32p PF01783.18 gi|518653120|ref|YP_008142640.1| - 0.036 14.2 0.5 4.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Ribosomal L32p protein family Terminase_GpA PF05876.7 gi|518653120|ref|YP_008142640.1| - 0.037 12.4 0.1 0.041 12.2 0.1 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) zf-Di19 PF05605.7 gi|518653120|ref|YP_008142640.1| - 0.038 14.1 0.4 4.8 7.3 0.0 2.1 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.1 gi|518653120|ref|YP_008142640.1| - 0.067 13.5 1.3 4.4 7.8 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Prok-RING_1 PF14446.1 gi|518653120|ref|YP_008142640.1| - 0.074 12.8 0.4 7.3 6.4 0.0 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF2321 PF10083.4 gi|518653120|ref|YP_008142640.1| - 0.082 12.4 0.3 0.087 12.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-NADH-PPase PF09297.6 gi|518653120|ref|YP_008142640.1| - 0.085 12.3 4.7 0.64 9.5 0.4 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-FPG_IleRS PF06827.9 gi|518653120|ref|YP_008142640.1| - 0.089 12.4 1.2 4.1 7.1 0.0 2.2 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS HypA PF01155.14 gi|518653120|ref|YP_008142640.1| - 0.1 12.3 0.1 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-HIT PF04438.11 gi|518653120|ref|YP_008142640.1| - 0.1 12.2 1.0 1.6 8.4 0.0 2.1 2 0 0 2 2 2 0 HIT zinc finger Cas_CXXC_CXXC PF09706.5 gi|518653120|ref|YP_008142640.1| - 0.12 12.6 0.6 13 6.0 0.0 2.2 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_CXXC_CXXC) Spt4 PF06093.8 gi|518653120|ref|YP_008142640.1| - 0.12 12.2 1.2 2 8.3 0.0 2.1 1 1 1 2 2 2 0 Spt4/RpoE2 zinc finger zf-piccolo PF05715.8 gi|518653120|ref|YP_008142640.1| - 0.13 12.3 1.1 0.16 11.9 0.7 1.1 1 0 0 1 1 1 0 Piccolo Zn-finger GFA PF04828.9 gi|518653120|ref|YP_008142640.1| - 0.13 12.1 0.8 1.4 8.9 0.0 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Zn_ribbon_recom PF13408.1 gi|518653120|ref|YP_008142640.1| - 0.14 12.3 0.5 0.34 11.1 0.3 1.7 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain zf-AN1 PF01428.11 gi|518653120|ref|YP_008142640.1| - 0.15 11.9 0.8 3.7 7.5 0.1 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger zf-C2HC_2 PF13913.1 gi|518653120|ref|YP_008142640.1| - 0.16 11.7 3.4 1.1 9.0 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Sgf11 PF08209.6 gi|518653120|ref|YP_008142640.1| - 0.18 11.1 4.1 0.21 10.9 0.2 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Lar_restr_allev PF14354.1 gi|518653120|ref|YP_008142640.1| - 0.23 11.8 1.5 0.91 9.8 1.0 1.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar Methyltransf_13 PF08421.6 gi|518653120|ref|YP_008142640.1| - 0.25 10.8 1.6 1 8.9 0.0 2.0 1 1 1 2 2 2 0 Putative zinc binding domain DUF2296 PF10058.4 gi|518653120|ref|YP_008142640.1| - 0.28 10.9 4.7 5.6 6.7 3.2 2.1 1 1 0 1 1 1 0 Predicted integral membrane metal-binding protein (DUF2296) Cys_rich_CPXG PF14255.1 gi|518653120|ref|YP_008142640.1| - 0.32 10.8 1.7 18 5.2 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-C2H2_6 PF13912.1 gi|518653120|ref|YP_008142640.1| - 0.33 10.9 1.7 1.8 8.5 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Trm112p PF03966.11 gi|518653120|ref|YP_008142640.1| - 0.39 11.1 3.0 2.2 8.7 2.0 2.0 1 1 0 1 1 1 0 Trm112p-like protein zf-IS66 PF13005.2 gi|518653120|ref|YP_008142640.1| - 0.86 9.6 3.8 69 3.5 2.7 2.1 1 1 0 1 1 1 0 zinc-finger binding domain of transposase IS66 Sugar_tr PF00083.19 gi|518653121|ref|YP_008142641.1| - 2.1e-13 49.6 3.2 2.5e-13 49.4 2.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518653121|ref|YP_008142641.1| - 7.3e-06 24.9 9.5 9.1e-06 24.6 6.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518653121|ref|YP_008142641.1| - 8e-05 20.9 3.7 9.6e-05 20.6 2.6 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector TRI12 PF06609.8 gi|518653121|ref|YP_008142641.1| - 0.004 15.3 0.3 0.0052 15.0 0.2 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) DmsC PF04976.7 gi|518653121|ref|YP_008142641.1| - 0.017 14.3 0.9 0.022 14.0 0.6 1.3 1 1 0 1 1 1 0 DMSO reductase anchor subunit (DmsC) Gly-zipper_YMGG PF13441.1 gi|518653121|ref|YP_008142641.1| - 0.077 12.5 5.5 0.18 11.3 3.8 1.6 1 1 0 1 1 1 0 YMGG-like Gly-zipper YtxH PF12732.2 gi|518653121|ref|YP_008142641.1| - 0.082 13.2 2.5 0.2 12.0 1.7 1.6 1 0 0 1 1 1 0 YtxH-like protein Rick_17kDa_Anti PF05433.10 gi|518653121|ref|YP_008142641.1| - 0.088 12.4 1.3 0.088 12.4 0.9 2.1 3 0 0 3 3 3 0 Glycine zipper 2TM domain FTR1 PF03239.9 gi|518653121|ref|YP_008142641.1| - 0.11 11.4 5.5 0.029 13.3 1.7 1.5 2 0 0 2 2 2 0 Iron permease FTR1 family Lipase_3 PF01764.20 gi|518653121|ref|YP_008142641.1| - 0.13 11.8 0.1 0.16 11.5 0.0 1.3 1 1 0 1 1 1 0 Lipase (class 3) HTH_Tnp_1 PF01527.15 gi|518653122|ref|YP_008142642.1| - 2.1e-09 37.1 0.0 2.8e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.1 gi|518653122|ref|YP_008142642.1| - 5.7e-05 23.0 0.2 9.8e-05 22.2 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|518653122|ref|YP_008142642.1| - 0.0005 20.1 0.0 0.00055 20.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.1 gi|518653122|ref|YP_008142642.1| - 0.00079 18.9 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_17 PF12728.2 gi|518653122|ref|YP_008142642.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain rve_3 PF13683.1 gi|518653123|ref|YP_008142643.1| - 1.7e-17 62.6 0.2 7e-17 60.7 0.2 2.1 1 0 0 1 1 1 1 Integrase core domain rve PF00665.21 gi|518653123|ref|YP_008142643.1| - 5.4e-17 62.0 0.0 9.8e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.1 gi|518653123|ref|YP_008142643.1| - 1.2e-12 47.6 2.0 2.8e-12 46.4 1.4 1.6 1 0 0 1 1 1 1 HTH-like domain rve_2 PF13333.1 gi|518653123|ref|YP_008142643.1| - 2.7e-07 30.5 1.1 2.7e-07 30.5 0.7 2.2 3 0 0 3 3 3 1 Integrase core domain DDE_Tnp_IS240 PF13610.1 gi|518653123|ref|YP_008142643.1| - 0.011 15.6 0.7 0.024 14.6 0.1 1.9 2 0 0 2 2 2 0 DDE domain DDE_Tnp_1 PF01609.16 gi|518653124|ref|YP_008142644.1| - 0.00023 20.7 0.2 0.00028 20.4 0.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain Sugar_tr PF00083.19 gi|518653125|ref|YP_008142645.1| - 2.6e-38 131.7 17.3 3.1e-38 131.5 12.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518653125|ref|YP_008142645.1| - 0.0001 21.1 23.3 0.00015 20.6 16.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily TarH PF02203.10 gi|518653125|ref|YP_008142645.1| - 0.055 13.3 0.9 0.094 12.5 0.0 1.8 2 0 0 2 2 2 0 Tar ligand binding domain homologue DUF161 PF02588.10 gi|518653125|ref|YP_008142645.1| - 7.3 6.9 23.2 9.5 6.6 0.1 3.4 2 1 0 2 2 2 0 Uncharacterized BCR, YitT family COG1284 adh_short PF00106.20 gi|518653126|ref|YP_008142646.1| - 6.8e-33 113.9 0.5 9e-33 113.5 0.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|518653126|ref|YP_008142646.1| - 5.2e-31 108.2 1.9 6.3e-31 107.9 1.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|518653126|ref|YP_008142646.1| - 7.3e-12 45.3 0.5 1.5e-11 44.3 0.3 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|518653126|ref|YP_008142646.1| - 5.6e-07 29.2 3.1 1.3e-06 28.0 0.2 2.4 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.14 gi|518653126|ref|YP_008142646.1| - 0.00015 20.8 3.8 0.00048 19.2 2.7 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Eno-Rase_NADH_b PF12242.3 gi|518653126|ref|YP_008142646.1| - 0.0037 17.0 3.3 0.01 15.5 2.3 1.7 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NmrA PF05368.8 gi|518653126|ref|YP_008142646.1| - 0.0038 16.5 3.6 0.032 13.4 0.8 2.5 3 0 0 3 3 3 1 NmrA-like family Polysacc_synt_2 PF02719.10 gi|518653126|ref|YP_008142646.1| - 0.0063 15.4 0.5 0.0088 14.9 0.3 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|518653126|ref|YP_008142646.1| - 0.0092 16.0 0.8 0.0092 16.0 0.6 2.2 2 1 0 2 2 2 1 NADH(P)-binding DUF1776 PF08643.5 gi|518653126|ref|YP_008142646.1| - 0.09 11.8 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) DUF460 PF04312.8 gi|518653126|ref|YP_008142646.1| - 0.093 12.2 1.4 0.19 11.2 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF460) F420_oxidored PF03807.12 gi|518653126|ref|YP_008142646.1| - 0.15 12.5 3.7 0.19 12.2 1.0 2.2 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent DFP PF04127.10 gi|518653126|ref|YP_008142646.1| - 0.27 10.8 4.9 3.8 7.0 1.3 2.7 2 1 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Aldose_epim PF01263.15 gi|518653127|ref|YP_008142647.1| - 3.2e-05 23.1 0.0 3.4e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase rve PF00665.21 gi|518653128|ref|YP_008142648.1| - 6.8e-22 77.8 0.0 1.7e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518653128|ref|YP_008142648.1| - 6.9e-06 25.5 2.0 0.00027 20.4 1.4 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518653128|ref|YP_008142648.1| - 3.9e-05 24.3 1.4 9.6e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|518653128|ref|YP_008142648.1| - 0.0071 15.9 0.2 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518653128|ref|YP_008142648.1| - 0.014 15.5 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|518653128|ref|YP_008142648.1| - 0.019 14.9 1.1 0.045 13.7 0.8 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518653128|ref|YP_008142648.1| - 0.028 13.8 1.5 0.045 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Aldose_epim PF01263.15 gi|518653129|ref|YP_008142649.1| - 2.2e-26 92.6 0.7 2.6e-26 92.4 0.5 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Ald_Xan_dh_C2 PF02738.13 gi|518653130|ref|YP_008142650.1| - 9.1e-93 311.4 0.3 5.2e-80 269.3 0.0 2.1 1 1 0 2 2 2 2 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.17 gi|518653130|ref|YP_008142650.1| - 3.6e-13 49.5 0.0 9.3e-13 48.2 0.0 1.7 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TA0956 PF11513.3 gi|518653131|ref|YP_008142651.1| - 6.1e-12 45.5 0.3 7.5e-12 45.2 0.2 1.1 1 0 0 1 1 1 1 Thermoplasma acidophilum protein TA0956 Glycos_transf_1 PF00534.15 gi|518653132|ref|YP_008142652.1| - 1.7e-17 63.3 0.0 3.2e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653132|ref|YP_008142652.1| - 1.6e-12 47.6 0.0 5.8e-12 45.9 0.0 1.9 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|518653132|ref|YP_008142652.1| - 0.064 13.5 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 PMSR PF01625.16 gi|518653133|ref|YP_008142653.1| - 1.4e-59 200.4 0.4 1.6e-59 200.2 0.3 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase HEPN PF05168.9 gi|518653133|ref|YP_008142653.1| - 0.051 13.4 0.1 8.4 6.3 0.2 2.4 2 1 0 2 2 2 0 HEPN domain DUF2611 PF11022.3 gi|518653133|ref|YP_008142653.1| - 0.15 12.1 0.5 0.33 11.0 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2611) Aldo_ket_red PF00248.16 gi|518653135|ref|YP_008142655.1| - 1.3e-66 224.3 0.0 1.4e-66 224.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Glycos_transf_1 PF00534.15 gi|518653136|ref|YP_008142656.1| - 3.4e-21 75.4 0.6 1.7e-20 73.1 0.1 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653136|ref|YP_008142656.1| - 9.7e-17 61.3 0.0 2.2e-16 60.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|518653136|ref|YP_008142656.1| - 0.00019 21.1 0.0 0.00074 19.2 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.15 gi|518653137|ref|YP_008142657.1| - 5.8e-23 81.1 0.0 1.6e-22 79.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653137|ref|YP_008142657.1| - 6.7e-09 36.0 0.0 1.1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|518653137|ref|YP_008142657.1| - 5.6e-07 29.7 0.0 1.9e-06 28.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_2 PF00535.21 gi|518653138|ref|YP_008142658.1| - 2.7e-12 46.7 1.6 4.3e-12 46.0 1.1 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.1 gi|518653138|ref|YP_008142658.1| - 0.024 14.9 0.0 0.36 11.1 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase family 2 TPP_enzyme_N PF02776.13 gi|518653140|ref|YP_008142660.1| - 3.9e-29 101.3 0.0 8.9e-29 100.1 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|518653140|ref|YP_008142660.1| - 1.1e-21 76.9 0.0 3.6e-21 75.3 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|518653140|ref|YP_008142660.1| - 5.1e-13 48.9 0.0 8.5e-13 48.2 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|518653140|ref|YP_008142660.1| - 0.097 12.2 0.0 0.44 10.0 0.0 2.1 2 0 0 2 2 2 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit LTD PF00932.14 gi|518653140|ref|YP_008142660.1| - 0.12 12.4 0.1 0.4 10.7 0.0 1.8 2 0 0 2 2 2 0 Lamin Tail Domain Peptidase_M20 PF01546.23 gi|518653141|ref|YP_008142661.1| - 1.6e-22 79.9 0.0 2.1e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518653141|ref|YP_008142661.1| - 2.5e-06 27.1 0.0 4.8e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.9 gi|518653141|ref|YP_008142661.1| - 0.0022 16.8 0.0 0.0066 15.2 0.0 1.8 2 0 0 2 2 2 1 M42 glutamyl aminopeptidase CBS PF00571.23 gi|518653142|ref|YP_008142662.1| - 1.3e-23 82.5 0.0 6.2e-15 54.7 0.0 2.1 2 0 0 2 2 2 2 CBS domain 3HCDH_N PF02737.13 gi|518653143|ref|YP_008142663.1| - 7.2e-57 191.9 0.1 8.8e-57 191.6 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|518653143|ref|YP_008142663.1| - 1e-25 89.9 0.1 4.2e-25 87.9 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|518653143|ref|YP_008142663.1| - 6e-05 22.8 0.1 0.0003 20.5 0.1 1.9 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AlaDh_PNT_C PF01262.16 gi|518653143|ref|YP_008142663.1| - 0.002 17.6 0.0 0.0032 17.0 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.10 gi|518653143|ref|YP_008142663.1| - 0.0021 17.9 0.6 0.0035 17.1 0.1 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|518653143|ref|YP_008142663.1| - 0.0036 16.7 0.0 0.0056 16.0 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox PF00070.22 gi|518653143|ref|YP_008142663.1| - 0.0048 17.2 0.1 0.0098 16.2 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.13 gi|518653143|ref|YP_008142663.1| - 0.0094 15.9 0.1 0.018 15.0 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain F420_oxidored PF03807.12 gi|518653143|ref|YP_008142663.1| - 0.0099 16.2 0.7 0.016 15.6 0.5 1.6 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DAO PF01266.19 gi|518653143|ref|YP_008142663.1| - 0.041 12.7 0.0 0.06 12.2 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.14 gi|518653143|ref|YP_008142663.1| - 0.098 11.8 0.1 0.17 11.0 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|518653143|ref|YP_008142663.1| - 0.13 12.3 0.1 0.28 11.2 0.1 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Peptidase_M19 PF01244.16 gi|518653144|ref|YP_008142664.1| - 2.2e-59 201.0 0.0 2.4e-59 200.8 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) MoCF_biosynth PF00994.19 gi|518653145|ref|YP_008142665.1| - 2.5e-15 56.1 0.0 3e-15 55.8 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoaC PF01967.16 gi|518653146|ref|YP_008142666.1| - 7.8e-47 158.3 3.4 8.8e-47 158.1 2.3 1.0 1 0 0 1 1 1 1 MoaC family Methyltransf_18 PF12847.2 gi|518653147|ref|YP_008142667.1| - 0.022 15.3 0.0 0.044 14.3 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain UPF0122 PF04297.9 gi|518653147|ref|YP_008142667.1| - 0.12 12.4 1.0 0.29 11.1 0.7 1.8 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like PNK3P PF08645.6 gi|518653148|ref|YP_008142668.1| - 7.8e-12 44.9 0.1 1e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase Hydrolase_like PF13242.1 gi|518653148|ref|YP_008142668.1| - 3.7e-08 32.9 0.0 7.4e-08 32.0 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.1 gi|518653148|ref|YP_008142668.1| - 6.2e-05 23.2 0.0 0.0008 19.6 0.0 2.1 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.5 gi|518653148|ref|YP_008142668.1| - 0.00042 19.7 0.0 0.00098 18.5 0.0 1.5 1 1 0 1 1 1 1 Mitochondrial PGP phosphatase LytR_cpsA_psr PF03816.9 gi|518653148|ref|YP_008142668.1| - 0.0039 17.1 0.1 0.0046 16.8 0.0 1.2 1 0 0 1 1 1 1 Cell envelope-related transcriptional attenuator domain Hydrolase_3 PF08282.7 gi|518653148|ref|YP_008142668.1| - 0.015 14.8 0.2 2.3 7.6 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase FtsH_ext PF06480.10 gi|518653148|ref|YP_008142668.1| - 0.027 14.6 0.0 0.11 12.6 0.0 1.9 2 0 0 2 2 2 0 FtsH Extracellular PAAR_motif PF05488.8 gi|518653148|ref|YP_008142668.1| - 0.11 12.5 0.1 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 PAAR motif DUF1947 PF09183.5 gi|518653148|ref|YP_008142668.1| - 0.15 11.8 0.7 0.85 9.4 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF1947) AAA_19 PF13245.1 gi|518653149|ref|YP_008142669.1| - 0.014 15.0 0.2 0.028 14.1 0.2 1.5 1 0 0 1 1 1 0 Part of AAA domain Sigma54_activat PF00158.21 gi|518653149|ref|YP_008142669.1| - 0.024 14.1 0.0 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain HSP70 PF00012.15 gi|518653150|ref|YP_008142670.1| - 4.5e-106 355.1 8.9 6.9e-104 347.9 3.2 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|518653150|ref|YP_008142670.1| - 1.3e-08 33.8 0.4 1.3e-08 33.8 0.3 3.3 3 1 0 3 3 3 1 MreB/Mbl protein Hydantoinase_A PF01968.13 gi|518653150|ref|YP_008142670.1| - 1.2e-05 24.6 0.3 3.4e-05 23.1 0.0 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase StbA PF06406.6 gi|518653150|ref|YP_008142670.1| - 0.011 14.6 4.8 0.068 12.0 0.0 2.6 2 1 0 2 2 2 0 StbA protein DDR PF08841.5 gi|518653150|ref|YP_008142670.1| - 0.012 14.4 0.2 0.057 12.2 0.1 2.1 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain BTB_2 PF02214.17 gi|518653150|ref|YP_008142670.1| - 0.044 13.9 0.5 0.33 11.1 0.2 2.2 2 0 0 2 2 2 0 BTB/POZ domain Sec20 PF03908.8 gi|518653150|ref|YP_008142670.1| - 0.066 12.9 2.7 0.16 11.7 1.4 1.9 1 1 0 1 1 1 0 Sec20 PC_rep PF01851.17 gi|518653150|ref|YP_008142670.1| - 0.13 12.5 1.9 0.62 10.4 0.0 2.9 3 0 0 3 3 3 0 Proteasome/cyclosome repeat FtsA PF14450.1 gi|518653150|ref|YP_008142670.1| - 0.55 10.0 15.0 0.26 11.1 0.1 4.2 4 1 0 4 4 4 0 Cell division protein FtsA DUF3979 PF13141.1 gi|518653151|ref|YP_008142671.1| - 0.022 14.6 0.3 0.045 13.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) CN_hydrolase PF00795.17 gi|518653152|ref|YP_008142672.1| - 4.2e-08 32.7 0.0 1.1e-07 31.4 0.0 1.6 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase NTP_transf_3 PF12804.2 gi|518653153|ref|YP_008142673.1| - 5e-36 124.2 0.0 5.9e-36 123.9 0.0 1.0 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|518653153|ref|YP_008142673.1| - 1.3e-07 31.4 0.0 1.6e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase CofC PF01983.11 gi|518653153|ref|YP_008142673.1| - 9.9e-05 21.3 0.0 0.00015 20.8 0.0 1.3 1 0 0 1 1 1 1 Guanylyl transferase CofC like IspD PF01128.14 gi|518653153|ref|YP_008142673.1| - 0.00011 21.7 0.0 0.00014 21.4 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UPF0270 PF06794.7 gi|518653153|ref|YP_008142673.1| - 0.021 14.5 0.0 0.054 13.2 0.0 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) NTP_transferase PF00483.18 gi|518653153|ref|YP_008142673.1| - 0.13 11.5 0.1 0.23 10.7 0.0 1.5 2 0 0 2 2 2 0 Nucleotidyl transferase MutS_V PF00488.16 gi|518653154|ref|YP_008142674.1| - 6.4e-26 91.1 0.1 9.7e-26 90.6 0.1 1.3 1 0 0 1 1 1 1 MutS domain V AAA_23 PF13476.1 gi|518653154|ref|YP_008142674.1| - 0.022 15.0 0.2 0.022 15.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain TylF PF05711.6 gi|518653154|ref|YP_008142674.1| - 0.034 13.2 0.0 0.059 12.4 0.0 1.3 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) Cnd1 PF12717.2 gi|518653154|ref|YP_008142674.1| - 0.038 13.8 0.0 0.074 12.9 0.0 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 AAA_28 PF13521.1 gi|518653154|ref|YP_008142674.1| - 0.091 12.7 0.1 0.51 10.2 0.0 2.2 1 1 1 2 2 2 0 AAA domain MutS_V PF00488.16 gi|518653155|ref|YP_008142675.1| - 1.4e-26 93.3 0.0 2e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 MutS domain V AAA_17 PF13207.1 gi|518653155|ref|YP_008142675.1| - 0.00028 21.6 2.5 0.0018 19.1 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|518653155|ref|YP_008142675.1| - 0.002 18.2 0.1 0.3 11.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|518653155|ref|YP_008142675.1| - 0.0035 17.2 0.5 0.026 14.4 0.0 2.7 2 2 0 2 2 2 1 AAA domain DegS PF05384.6 gi|518653155|ref|YP_008142675.1| - 0.047 12.9 1.1 3.2 6.9 0.1 2.4 2 0 0 2 2 2 0 Sensor protein DegS AAA_23 PF13476.1 gi|518653155|ref|YP_008142675.1| - 0.054 13.8 5.1 0.12 12.7 0.1 2.5 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.12 gi|518653155|ref|YP_008142675.1| - 0.08 12.3 0.1 0.54 9.6 0.0 2.2 3 0 0 3 3 3 0 IstB-like ATP binding protein MMR_HSR1_C PF08438.5 gi|518653156|ref|YP_008142676.1| - 0.015 15.5 0.1 0.018 15.2 0.1 1.4 1 1 0 1 1 1 0 GTPase of unknown function C-terminal MFS_1 PF07690.11 gi|518653157|ref|YP_008142677.1| - 2.5e-12 46.1 44.5 2.5e-12 46.1 30.9 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518653157|ref|YP_008142677.1| - 0.04 12.0 16.0 0.072 11.1 11.1 1.4 1 1 0 1 1 1 0 Transmembrane secretion effector DAGK_prokar PF01219.14 gi|518653157|ref|YP_008142677.1| - 8.2 6.0 15.4 0.31 10.6 0.6 3.6 2 2 1 3 3 3 0 Prokaryotic diacylglycerol kinase TrmB PF01978.14 gi|518653158|ref|YP_008142678.1| - 1.3e-05 24.8 0.4 2.7e-05 23.7 0.3 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|518653158|ref|YP_008142678.1| - 0.00036 20.1 0.0 0.00061 19.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|518653158|ref|YP_008142678.1| - 0.0014 18.3 0.0 0.0023 17.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|518653158|ref|YP_008142678.1| - 0.0055 16.7 0.1 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF1638 PF07796.6 gi|518653158|ref|YP_008142678.1| - 0.0073 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) HTH_24 PF13412.1 gi|518653158|ref|YP_008142678.1| - 0.0089 15.3 0.7 0.045 13.1 0.0 2.4 2 1 1 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|518653158|ref|YP_008142678.1| - 0.0097 15.5 0.2 0.05 13.3 0.0 2.0 2 0 0 2 2 2 1 MarR family TFIIE_alpha PF02002.12 gi|518653158|ref|YP_008142678.1| - 0.047 13.2 1.1 0.14 11.6 0.2 2.1 1 1 1 2 2 2 0 TFIIE alpha subunit HTH_Mga PF08280.6 gi|518653158|ref|YP_008142678.1| - 0.055 13.2 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain DUF1828 PF08861.5 gi|518653158|ref|YP_008142678.1| - 0.078 12.6 0.2 0.27 10.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF1828 PadR PF03551.9 gi|518653158|ref|YP_008142678.1| - 0.13 12.0 0.2 0.25 11.1 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TPR_19 PF14559.1 gi|518653159|ref|YP_008142679.1| - 7.1e-18 64.7 14.6 0.00026 21.2 0.1 6.6 7 1 0 7 7 7 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|518653159|ref|YP_008142679.1| - 1.3e-17 63.9 3.0 0.0085 16.7 0.1 6.3 4 1 3 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|518653159|ref|YP_008142679.1| - 2.4e-13 49.5 22.4 0.0001 21.9 0.3 6.3 5 1 1 7 7 6 4 TPR repeat TPR_2 PF07719.12 gi|518653159|ref|YP_008142679.1| - 2.7e-11 42.4 14.2 0.044 13.7 0.1 8.6 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|518653159|ref|YP_008142679.1| - 2.5e-09 36.9 0.4 2.9 8.7 0.0 7.8 4 2 5 9 9 8 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|518653159|ref|YP_008142679.1| - 3.1e-09 36.6 13.3 0.011 15.6 0.4 6.5 4 2 2 6 6 5 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|518653159|ref|YP_008142679.1| - 9.1e-08 31.7 13.5 0.44 10.8 0.0 7.9 9 1 1 10 10 8 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|518653159|ref|YP_008142679.1| - 1.3e-07 31.6 13.4 0.067 13.3 0.0 5.4 4 1 1 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|518653159|ref|YP_008142679.1| - 8e-06 25.1 1.4 0.00034 19.7 0.2 2.7 1 1 1 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.12 gi|518653159|ref|YP_008142679.1| - 2.8e-05 24.4 0.0 4 7.7 0.0 3.3 3 0 0 3 3 3 2 Bacterial transcriptional activator domain TPR_6 PF13174.1 gi|518653159|ref|YP_008142679.1| - 0.00065 19.9 1.4 13 6.4 0.0 6.3 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_1 PF00515.23 gi|518653159|ref|YP_008142679.1| - 0.0013 18.2 14.2 3.3 7.4 0.1 7.3 8 0 0 8 8 8 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|518653159|ref|YP_008142679.1| - 0.014 15.2 6.9 0.2 11.5 0.1 5.1 6 0 0 6 6 5 0 Fis1 C-terminal tetratricopeptide repeat HEPN PF05168.9 gi|518653159|ref|YP_008142679.1| - 0.014 15.2 4.0 0.021 14.7 0.1 3.3 5 0 0 5 5 5 0 HEPN domain TPR_7 PF13176.1 gi|518653159|ref|YP_008142679.1| - 0.047 13.5 1.6 16 5.6 0.0 5.2 7 0 0 7 7 6 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.5 gi|518653159|ref|YP_008142679.1| - 0.15 11.5 0.0 0.42 10.0 0.0 1.7 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_8 PF13181.1 gi|518653159|ref|YP_008142679.1| - 0.74 9.7 18.7 0.21 11.4 0.2 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat Pyr_redox_2 PF07992.9 gi|518653161|ref|YP_008142681.1| - 8.1e-16 58.4 0.0 2.6e-15 56.8 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|518653161|ref|YP_008142681.1| - 4.4e-12 46.2 0.3 4.4e-12 46.2 0.2 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|518653161|ref|YP_008142681.1| - 2.6e-05 24.3 0.9 0.0028 17.7 0.1 2.6 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|518653161|ref|YP_008142681.1| - 0.00018 20.5 0.1 0.18 10.6 0.0 2.8 2 1 1 3 3 3 2 FAD dependent oxidoreductase K_oxygenase PF13434.1 gi|518653161|ref|YP_008142681.1| - 0.0028 16.6 0.0 0.0063 15.4 0.0 1.5 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.13 gi|518653161|ref|YP_008142681.1| - 0.0092 15.6 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.1 gi|518653161|ref|YP_008142681.1| - 0.021 14.8 0.0 2.7 8.0 0.0 2.6 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Pput2613-deam PF14427.1 gi|518653161|ref|YP_008142681.1| - 0.11 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Pput_2613-like deaminase DJ-1_PfpI PF01965.19 gi|518653162|ref|YP_008142682.1| - 1.4e-34 118.6 0.0 1.6e-34 118.4 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|518653162|ref|YP_008142682.1| - 1.3e-12 47.3 0.0 1.6e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 Putative amidotransferase Asparaginase_2 PF01112.13 gi|518653163|ref|YP_008142683.1| - 5.7e-58 196.1 1.8 7.4e-58 195.7 1.2 1.1 1 0 0 1 1 1 1 Asparaginase NIR_SIR PF01077.17 gi|518653163|ref|YP_008142683.1| - 0.088 12.1 0.1 0.16 11.3 0.0 1.5 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain OrfB_Zn_ribbon PF07282.6 gi|518653165|ref|YP_008142685.1| - 2.1e-11 43.3 0.1 5.5e-11 41.9 0.1 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|518653165|ref|YP_008142685.1| - 0.04 13.3 2.7 0.11 11.9 1.9 1.8 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Zn_Tnp_IS1595 PF12760.2 gi|518653165|ref|YP_008142685.1| - 0.11 12.3 0.3 0.21 11.4 0.2 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|518653165|ref|YP_008142685.1| - 0.13 11.7 4.7 0.47 9.9 3.2 2.0 1 0 0 1 1 1 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|518653165|ref|YP_008142685.1| - 0.16 11.3 1.2 0.7 9.2 0.8 2.0 2 0 0 2 2 2 0 TFIIB zinc-binding RecR PF02132.10 gi|518653165|ref|YP_008142685.1| - 0.19 11.1 1.1 4.6 6.7 0.0 2.4 2 0 0 2 2 2 0 RecR protein DUF1451 PF07295.6 gi|518653165|ref|YP_008142685.1| - 2.9 7.6 6.2 1.3 8.8 1.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) GHMP_kinases_N PF00288.21 gi|518653166|ref|YP_008142686.1| - 4.4e-10 39.4 0.0 8.7e-10 38.5 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|518653166|ref|YP_008142686.1| - 5.1e-06 26.6 0.1 5.1e-06 26.6 0.0 1.7 2 0 0 2 2 2 1 GHMP kinases C terminal KorB_C PF06613.6 gi|518653166|ref|YP_008142686.1| - 0.063 12.7 0.0 0.52 9.8 0.0 2.3 2 0 0 2 2 2 0 KorB C-terminal beta-barrel domain Cellulase PF00150.13 gi|518653166|ref|YP_008142686.1| - 0.25 10.5 2.9 3.6 6.7 0.3 2.8 2 1 1 3 3 3 0 Cellulase (glycosyl hydrolase family 5) Flu_B_M2 PF04772.7 gi|518653167|ref|YP_008142687.1| - 0.27 11.2 3.0 7.2 6.7 0.2 2.1 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) MFS_1 PF07690.11 gi|518653168|ref|YP_008142688.1| - 3.5e-54 183.8 63.3 1e-43 149.4 27.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518653168|ref|YP_008142688.1| - 1.4e-06 26.7 7.1 2.3e-06 26.0 4.9 1.4 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1_like PF12832.2 gi|518653168|ref|YP_008142688.1| - 8.9e-05 22.2 1.3 8.9e-05 22.2 0.9 3.2 3 1 1 4 4 4 1 MFS_1 like family p450 PF00067.17 gi|518653169|ref|YP_008142689.1| - 4.4e-34 117.7 0.0 6.2e-27 94.2 0.0 3.0 1 1 1 2 2 2 2 Cytochrome P450 SfsA PF03749.8 gi|518653170|ref|YP_008142690.1| - 5.2e-51 173.1 0.0 6.4e-51 172.8 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein Peptidase_M20 PF01546.23 gi|518653171|ref|YP_008142691.1| - 1e-26 93.6 0.0 1.3e-26 93.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|518653171|ref|YP_008142691.1| - 9.2e-15 54.3 0.0 1.6e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.12 gi|518653171|ref|YP_008142691.1| - 0.0013 18.4 0.0 0.0021 17.7 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.9 gi|518653171|ref|YP_008142691.1| - 0.02 13.6 0.0 0.13 11.0 0.0 2.0 1 1 1 2 2 2 0 M42 glutamyl aminopeptidase PALP PF00291.20 gi|518653172|ref|YP_008142692.1| - 3.6e-59 200.4 0.3 4.2e-59 200.2 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TF_Zn_Ribbon PF08271.7 gi|518653172|ref|YP_008142692.1| - 0.0056 15.9 1.0 0.016 14.5 0.7 1.8 1 0 0 1 1 1 1 TFIIB zinc-binding PhnA_Zn_Ribbon PF08274.7 gi|518653172|ref|YP_008142692.1| - 0.0059 16.3 2.0 0.013 15.2 1.4 1.5 1 0 0 1 1 1 1 PhnA Zinc-Ribbon zinc_ribbon_5 PF13719.1 gi|518653172|ref|YP_008142692.1| - 0.012 15.1 2.0 0.17 11.5 1.4 2.5 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518653172|ref|YP_008142692.1| - 0.033 13.8 3.1 0.39 10.4 2.1 2.5 1 1 0 1 1 1 0 zinc-ribbon domain HypA PF01155.14 gi|518653172|ref|YP_008142692.1| - 0.062 12.9 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_2 PF13240.1 gi|518653172|ref|YP_008142692.1| - 0.069 12.6 2.0 0.13 11.8 1.4 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|518653172|ref|YP_008142692.1| - 0.069 12.9 0.3 0.24 11.2 0.2 1.9 2 0 0 2 2 2 0 zinc-ribbons DZR PF12773.2 gi|518653172|ref|YP_008142692.1| - 0.13 12.1 0.2 0.22 11.3 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Desulfoferrod_N PF06397.7 gi|518653172|ref|YP_008142692.1| - 0.32 10.4 2.5 0.18 11.2 0.2 1.7 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Sec61_beta PF03911.11 gi|518653173|ref|YP_008142693.1| - 2.3e-06 27.3 0.1 2.6e-06 27.1 0.1 1.1 1 0 0 1 1 1 1 Sec61beta family EF-hand_4 PF12763.2 gi|518653176|ref|YP_008142696.1| - 0.056 13.1 0.5 0.12 12.0 0.0 1.8 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand CBS PF00571.23 gi|518653177|ref|YP_008142697.1| - 7.9e-40 134.3 1.4 5e-10 39.0 0.0 4.2 4 0 0 4 4 4 4 CBS domain PRC PF05239.11 gi|518653177|ref|YP_008142697.1| - 0.011 15.6 0.1 6 6.8 0.0 2.9 2 0 0 2 2 2 0 PRC-barrel domain DUF2122 PF09895.4 gi|518653177|ref|YP_008142697.1| - 0.022 14.9 0.8 1.1 9.5 0.0 2.7 3 0 0 3 3 3 0 RecB-family nuclease (DUF2122) tRNA-synt_2b PF00587.20 gi|518653178|ref|YP_008142698.1| - 2.8e-49 167.0 0.1 4.8e-49 166.2 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|518653178|ref|YP_008142698.1| - 3e-22 78.3 1.0 5.5e-22 77.5 0.3 1.8 2 0 0 2 2 2 1 Anticodon binding domain DUF678 PF05077.7 gi|518653178|ref|YP_008142698.1| - 0.0093 15.9 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF678) zf-DNA_Pol PF08996.5 gi|518653178|ref|YP_008142698.1| - 0.025 13.9 0.1 0.055 12.8 0.1 1.5 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Zn-ribbon_8 PF09723.5 gi|518653178|ref|YP_008142698.1| - 0.046 13.6 0.2 4.7 7.2 0.0 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.7 gi|518653178|ref|YP_008142698.1| - 0.14 12.2 0.4 9.5 6.3 0.0 3.1 3 0 0 3 3 3 0 Zinc-binding domain of primase-helicase zinc_ribbon_5 PF13719.1 gi|518653178|ref|YP_008142698.1| - 0.16 11.5 0.7 5.5 6.6 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Trypsin_2 PF13365.1 gi|518653179|ref|YP_008142699.1| - 1.2e-22 80.1 0.2 2e-22 79.3 0.2 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.21 gi|518653179|ref|YP_008142699.1| - 1.1e-14 54.5 0.0 1.7e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Trypsin PDZ_2 PF13180.1 gi|518653179|ref|YP_008142699.1| - 1.3e-10 41.0 0.9 8.2e-10 38.4 0.0 2.5 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.19 gi|518653179|ref|YP_008142699.1| - 1.8e-06 28.0 0.0 1.8e-06 28.0 0.0 2.4 3 1 0 3 3 3 1 PDZ domain (Also known as DHR or GLGF) Peptidase_S46 PF10459.4 gi|518653179|ref|YP_008142699.1| - 0.0016 16.9 1.3 0.23 9.8 0.1 2.1 2 0 0 2 2 2 2 Peptidase S46 LSM PF01423.17 gi|518653179|ref|YP_008142699.1| - 0.032 13.7 0.3 0.14 11.6 0.0 2.3 2 0 0 2 2 2 0 LSM domain PDZ_1 PF12812.2 gi|518653179|ref|YP_008142699.1| - 0.045 13.6 0.0 0.098 12.5 0.0 1.6 1 0 0 1 1 1 0 PDZ-like domain HxlR PF01638.12 gi|518653180|ref|YP_008142700.1| - 3.5e-15 55.3 0.1 4e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|518653180|ref|YP_008142700.1| - 4.4e-05 23.1 0.1 5.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|518653180|ref|YP_008142700.1| - 0.00038 20.4 0.0 0.00069 19.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|518653180|ref|YP_008142700.1| - 0.00061 19.5 0.1 0.0068 16.2 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_20 PF12840.2 gi|518653180|ref|YP_008142700.1| - 0.1 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.17 gi|518653180|ref|YP_008142700.1| - 0.11 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 MarR family tRNA-synt_2 PF00152.15 gi|518653181|ref|YP_008142701.1| - 5.6e-52 176.5 4.0 5.2e-26 91.2 0.0 2.0 1 1 1 2 2 2 2 tRNA synthetases class II (D, K and N) DUF1983 PF09327.6 gi|518653181|ref|YP_008142701.1| - 0.14 12.1 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1983) AsnC_trans_reg PF01037.16 gi|518653182|ref|YP_008142702.1| - 2.4e-11 43.1 0.0 3.3e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|518653182|ref|YP_008142702.1| - 1.5e-09 37.0 0.3 4e-09 35.7 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|518653182|ref|YP_008142702.1| - 2.6e-07 30.0 0.1 5.7e-07 28.9 0.1 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|518653182|ref|YP_008142702.1| - 1.3e-05 24.8 0.0 2.8e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|518653182|ref|YP_008142702.1| - 2.9e-05 23.7 0.0 6.5e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|518653182|ref|YP_008142702.1| - 3.3e-05 23.4 0.0 5.3e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.5 gi|518653182|ref|YP_008142702.1| - 4.9e-05 22.8 0.0 8.6e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF2250 PF10007.4 gi|518653182|ref|YP_008142702.1| - 7e-05 22.6 0.1 0.00014 21.6 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.2 gi|518653182|ref|YP_008142702.1| - 0.00046 19.8 0.0 0.00075 19.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|518653182|ref|YP_008142702.1| - 0.00076 19.7 0.0 0.0025 18.1 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|518653182|ref|YP_008142702.1| - 0.015 14.8 0.0 0.038 13.5 0.0 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_11 PF08279.7 gi|518653182|ref|YP_008142702.1| - 0.03 13.9 0.0 0.05 13.2 0.0 1.5 1 0 0 1 1 1 0 HTH domain Fe_dep_repress PF01325.14 gi|518653182|ref|YP_008142702.1| - 0.031 14.2 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HxlR PF01638.12 gi|518653182|ref|YP_008142702.1| - 0.037 13.6 0.5 0.1 12.2 0.0 1.9 2 1 1 3 3 3 0 HxlR-like helix-turn-helix Rrf2 PF02082.15 gi|518653182|ref|YP_008142702.1| - 0.047 13.8 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_23 PF13384.1 gi|518653182|ref|YP_008142702.1| - 0.097 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain TFIIE_alpha PF02002.12 gi|518653182|ref|YP_008142702.1| - 0.099 12.1 0.2 0.14 11.7 0.2 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_28 PF13518.1 gi|518653182|ref|YP_008142702.1| - 0.1 12.6 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.9 gi|518653182|ref|YP_008142702.1| - 0.13 12.0 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_6 PF01418.12 gi|518653182|ref|YP_008142702.1| - 0.14 11.9 0.1 0.41 10.4 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family AAA_11 PF13086.1 gi|518653183|ref|YP_008142703.1| - 7.7e-20 71.4 7.2 2.8e-09 36.9 0.0 3.7 3 1 0 3 3 3 2 AAA domain AAA_12 PF13087.1 gi|518653183|ref|YP_008142703.1| - 1.6e-19 70.1 0.1 4.1e-19 68.7 0.1 1.7 1 0 0 1 1 1 1 AAA domain DUF4011 PF13195.1 gi|518653183|ref|YP_008142703.1| - 9.6e-19 68.0 0.8 4.3e-16 59.4 0.0 3.2 1 1 1 2 2 2 2 Protein of unknown function (DUF4011) AAA_19 PF13245.1 gi|518653183|ref|YP_008142703.1| - 6.7e-12 44.9 0.0 1.7e-11 43.7 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain AAA_30 PF13604.1 gi|518653183|ref|YP_008142703.1| - 2.6e-05 23.8 0.0 0.0057 16.2 0.0 2.7 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.13 gi|518653183|ref|YP_008142703.1| - 3.3e-05 23.5 0.0 0.06 12.8 0.0 3.3 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase IstB_IS21 PF01695.12 gi|518653183|ref|YP_008142703.1| - 0.00043 19.7 0.0 0.0044 16.4 0.0 2.3 2 0 0 2 2 2 1 IstB-like ATP binding protein ResIII PF04851.10 gi|518653183|ref|YP_008142703.1| - 0.0019 18.0 0.4 0.17 11.6 0.0 3.8 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit AAA_22 PF13401.1 gi|518653183|ref|YP_008142703.1| - 0.007 16.5 0.1 0.71 10.0 0.0 3.2 3 0 0 3 3 3 1 AAA domain Helicase_RecD PF05127.9 gi|518653183|ref|YP_008142703.1| - 0.0088 15.7 0.0 0.26 10.8 0.0 2.6 2 0 0 2 2 2 1 Helicase DUF559 PF04480.7 gi|518653183|ref|YP_008142703.1| - 0.01 15.4 0.1 0.066 12.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF559) AAA_25 PF13481.1 gi|518653183|ref|YP_008142703.1| - 0.014 14.7 0.0 0.39 10.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_34 PF13872.1 gi|518653183|ref|YP_008142703.1| - 0.015 14.0 0.0 0.028 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 AAA PF00004.24 gi|518653183|ref|YP_008142703.1| - 0.046 13.9 1.1 0.27 11.4 0.0 2.9 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|518653183|ref|YP_008142703.1| - 0.22 11.4 0.0 0.64 9.9 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain MFS_1 PF07690.11 gi|518653184|ref|YP_008142704.1| - 6.8e-23 80.9 33.5 6.8e-23 80.9 23.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518653184|ref|YP_008142704.1| - 2.1e-12 46.4 29.3 1.8e-11 43.3 20.3 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter Transposase_mut PF00872.13 gi|518653185|ref|YP_008142705.1| - 3.4e-66 223.3 0.0 4.2e-66 223.0 0.0 1.1 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|518653185|ref|YP_008142705.1| - 4.4e-09 36.3 0.0 8.3e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain HTH_32 PF13565.1 gi|518653185|ref|YP_008142705.1| - 0.063 14.0 0.0 0.15 12.8 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain CbiG_N PF11760.3 gi|518653186|ref|YP_008142706.1| - 5.1e-31 106.2 0.1 1.1e-30 105.1 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.11 gi|518653186|ref|YP_008142706.1| - 1.8e-22 79.8 0.0 3.3e-22 79.0 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.3 gi|518653186|ref|YP_008142706.1| - 0.0081 16.3 0.0 0.019 15.2 0.0 1.6 1 0 0 1 1 1 1 Cobalamin biosynthesis central region GATase_3 PF07685.9 gi|518653187|ref|YP_008142707.1| - 6e-30 103.9 0.1 1.2e-29 102.9 0.1 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|518653187|ref|YP_008142707.1| - 1.8e-23 82.9 0.1 3.6e-23 82.0 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|518653187|ref|YP_008142707.1| - 2.8e-16 59.7 0.7 1.2e-09 38.0 0.0 3.3 1 1 2 3 3 3 2 AAA domain Peptidase_S51 PF03575.12 gi|518653187|ref|YP_008142707.1| - 0.079 12.7 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Peptidase family S51 Phosphodiest PF01663.17 gi|518653188|ref|YP_008142708.1| - 3.3e-10 39.8 0.5 3.4e-09 36.5 0.3 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.7 gi|518653188|ref|YP_008142708.1| - 0.054 13.1 0.0 0.59 9.7 0.0 2.3 2 0 0 2 2 2 0 PglZ domain Metalloenzyme PF01676.13 gi|518653188|ref|YP_008142708.1| - 0.09 12.1 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 Metalloenzyme superfamily MFS_1 PF07690.11 gi|518653189|ref|YP_008142709.1| - 7.6e-49 166.3 77.0 8.6e-42 143.0 33.8 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518653189|ref|YP_008142709.1| - 6.6e-10 38.1 16.6 6.6e-10 38.1 11.5 4.1 1 1 1 3 3 3 1 Sugar (and other) transporter TRI12 PF06609.8 gi|518653189|ref|YP_008142709.1| - 0.0079 14.4 20.7 0.025 12.7 14.3 1.8 1 1 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) SKG6 PF08693.5 gi|518653189|ref|YP_008142709.1| - 3.2 7.1 10.9 0.36 10.1 0.4 3.8 3 0 0 3 3 3 0 Transmembrane alpha-helix domain AA_permease PF00324.16 gi|518653190|ref|YP_008142710.1| - 1.3e-25 89.7 51.2 1.6e-25 89.4 35.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518653190|ref|YP_008142710.1| - 3.7e-23 81.7 56.8 5.4e-23 81.2 39.4 1.3 1 0 0 1 1 1 1 Amino acid permease MFS_1 PF07690.11 gi|518653191|ref|YP_008142711.1| - 2.6e-53 180.9 83.7 3.7e-38 131.1 34.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.14 gi|518653191|ref|YP_008142711.1| - 1.9e-07 30.0 17.8 1.9e-07 30.0 12.4 2.0 2 0 0 2 2 2 1 LacY proton/sugar symporter MFS_3 PF05977.8 gi|518653191|ref|YP_008142711.1| - 7.1e-07 27.7 25.1 1.3e-06 26.8 12.5 2.7 1 1 1 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.1 gi|518653191|ref|YP_008142711.1| - 0.0026 16.2 17.5 0.0026 16.2 12.2 2.7 1 1 1 2 2 2 1 MFS/sugar transport protein HILPDA PF15220.1 gi|518653191|ref|YP_008142711.1| - 1 9.3 8.2 0.096 12.6 0.9 2.7 2 0 0 2 2 2 0 Hypoxia-inducible lipid droplet-associated AA_permease_2 PF13520.1 gi|518653192|ref|YP_008142712.1| - 9.4e-42 143.0 44.5 9.4e-42 143.0 30.9 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.16 gi|518653192|ref|YP_008142712.1| - 3.1e-32 111.5 54.5 3.1e-32 111.5 37.8 2.0 1 1 1 2 2 2 1 Amino acid permease DUF3593 PF12159.3 gi|518653192|ref|YP_008142712.1| - 0.02 14.6 1.0 0.19 11.5 0.7 2.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) AA_permease PF00324.16 gi|518653193|ref|YP_008142713.1| - 4.9e-40 137.2 61.7 6.6e-40 136.8 42.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518653193|ref|YP_008142713.1| - 3.1e-28 98.4 68.1 4.9e-28 97.8 47.1 1.4 1 1 0 1 1 1 1 Amino acid permease PPO1_DWL PF12142.3 gi|518653195|ref|YP_008142715.1| - 0.083 12.4 0.1 0.16 11.5 0.1 1.5 1 0 0 1 1 1 0 Polyphenol oxidase middle domain rve PF00665.21 gi|518653196|ref|YP_008142716.1| - 6.8e-22 77.8 0.0 1.7e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518653196|ref|YP_008142716.1| - 6.9e-06 25.5 2.0 0.00027 20.4 1.4 2.7 1 1 0 1 1 1 1 Integrase core domain HTH_32 PF13565.1 gi|518653196|ref|YP_008142716.1| - 3.9e-05 24.3 1.4 9.6e-05 23.1 0.2 2.2 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|518653196|ref|YP_008142716.1| - 0.0071 15.9 0.2 0.019 14.5 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.1 gi|518653196|ref|YP_008142716.1| - 0.014 15.5 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|518653196|ref|YP_008142716.1| - 0.019 14.9 1.1 0.045 13.7 0.8 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|518653196|ref|YP_008142716.1| - 0.028 13.8 1.5 0.045 13.1 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding OrfB_Zn_ribbon PF07282.6 gi|518653197|ref|YP_008142717.1| - 4.4e-11 42.2 0.1 1.2e-10 40.9 0.1 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518653197|ref|YP_008142717.1| - 8.3e-09 35.1 8.3 1.3e-08 34.5 5.8 1.3 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.7 gi|518653197|ref|YP_008142717.1| - 0.016 14.4 1.4 0.1 11.9 1.0 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Hormone_6 PF00236.13 gi|518653197|ref|YP_008142717.1| - 0.039 13.7 0.3 0.13 12.1 0.2 1.8 1 0 0 1 1 1 0 Glycoprotein hormone FYVE PF01363.16 gi|518653197|ref|YP_008142717.1| - 0.043 13.7 0.1 0.089 12.7 0.0 1.5 1 0 0 1 1 1 0 FYVE zinc finger RecR PF02132.10 gi|518653197|ref|YP_008142717.1| - 0.081 12.3 1.5 3.2 7.2 0.0 2.3 2 0 0 2 2 2 0 RecR protein A2L_zn_ribbon PF08792.5 gi|518653197|ref|YP_008142717.1| - 0.14 11.6 5.0 0.41 10.1 3.4 1.8 1 0 0 1 1 1 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.8 gi|518653197|ref|YP_008142717.1| - 0.15 11.5 5.3 0.091 12.2 1.7 2.1 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF1451 PF07295.6 gi|518653197|ref|YP_008142717.1| - 0.28 10.9 4.7 0.45 10.2 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) zinc_ribbon_5 PF13719.1 gi|518653197|ref|YP_008142717.1| - 0.75 9.4 3.6 4.4 6.9 2.5 2.3 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518653197|ref|YP_008142717.1| - 0.92 9.2 4.1 6.7 6.5 2.8 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Pyr_redox_2 PF07992.9 gi|518653198|ref|YP_008142718.1| - 1.7e-27 96.6 0.0 2.7e-27 95.9 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|518653198|ref|YP_008142718.1| - 3e-20 72.2 0.0 4.4e-19 68.5 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|518653198|ref|YP_008142718.1| - 1e-14 54.6 4.8 2e-14 53.7 0.0 3.5 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|518653198|ref|YP_008142718.1| - 3.8e-08 32.5 2.9 0.0032 16.3 0.9 3.6 3 1 0 3 3 3 2 Glucose inhibited division protein A K_oxygenase PF13434.1 gi|518653198|ref|YP_008142718.1| - 1.1e-07 31.1 0.0 0.0027 16.6 0.0 2.6 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 gi|518653198|ref|YP_008142718.1| - 2.8e-07 29.7 4.3 0.016 14.1 0.2 3.7 4 0 0 4 4 4 3 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|518653198|ref|YP_008142718.1| - 8.8e-07 29.1 0.0 0.004 17.2 0.0 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|518653198|ref|YP_008142718.1| - 3.2e-05 23.8 0.1 0.25 11.3 0.0 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|518653198|ref|YP_008142718.1| - 0.00027 20.1 0.8 0.045 12.8 0.1 2.6 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.19 gi|518653198|ref|YP_008142718.1| - 0.00038 19.4 0.4 0.0073 15.1 0.1 2.3 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.14 gi|518653198|ref|YP_008142718.1| - 0.0013 17.8 0.2 0.73 8.8 0.1 2.9 3 0 0 3 3 3 2 FAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|518653198|ref|YP_008142718.1| - 0.0024 17.2 0.5 0.029 13.7 0.0 2.6 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HI0933_like PF03486.9 gi|518653198|ref|YP_008142718.1| - 0.0048 15.4 3.0 0.64 8.4 0.1 2.8 3 0 0 3 3 3 2 HI0933-like protein 3HCDH_N PF02737.13 gi|518653198|ref|YP_008142718.1| - 0.009 15.6 0.1 0.096 12.3 0.0 2.1 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_oxidored PF12831.2 gi|518653198|ref|YP_008142718.1| - 0.023 13.7 0.0 0.63 9.0 0.0 2.3 2 0 0 2 2 2 0 FAD dependent oxidoreductase Shikimate_DH PF01488.15 gi|518653198|ref|YP_008142718.1| - 0.073 13.1 0.4 0.68 10.0 0.0 2.5 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.7 gi|518653198|ref|YP_008142718.1| - 0.077 11.9 0.5 0.75 8.6 0.1 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein ApbA PF02558.11 gi|518653198|ref|YP_008142718.1| - 0.14 11.5 0.4 52 3.2 0.0 3.1 2 1 0 3 3 3 0 Ketopantoate reductase PanE/ApbA MFS_1 PF07690.11 gi|518653199|ref|YP_008142719.1| - 3.4e-30 104.9 17.7 4.1e-30 104.6 12.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518653199|ref|YP_008142719.1| - 2.6e-10 39.4 13.3 3.1e-10 39.2 9.2 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter PUCC PF03209.10 gi|518653199|ref|YP_008142719.1| - 0.16 10.6 10.6 0.45 9.1 6.8 1.9 1 1 1 2 2 2 0 PUCC protein MFS_3 PF05977.8 gi|518653199|ref|YP_008142719.1| - 0.29 9.1 3.6 0.4 8.7 2.5 1.2 1 0 0 1 1 1 0 Transmembrane secretion effector OrfB_Zn_ribbon PF07282.6 gi|518653200|ref|YP_008142720.1| - 1.1e-10 41.0 0.5 2.7e-10 39.7 0.3 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518653200|ref|YP_008142720.1| - 0.019 14.3 2.4 0.098 11.9 1.6 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding C1_1 PF00130.17 gi|518653200|ref|YP_008142720.1| - 0.064 12.9 0.3 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DNA_RNApol_7kD PF03604.8 gi|518653200|ref|YP_008142720.1| - 0.094 12.1 2.7 0.2 11.1 1.9 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF1451 PF07295.6 gi|518653200|ref|YP_008142720.1| - 0.11 12.2 0.4 0.11 12.2 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1451) zinc_ribbon_5 PF13719.1 gi|518653200|ref|YP_008142720.1| - 0.21 11.2 5.0 0.21 11.1 1.7 2.4 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518653200|ref|YP_008142720.1| - 0.31 10.7 5.7 0.3 10.8 2.1 2.4 2 1 0 2 2 2 0 zinc-ribbon domain RecR PF02132.10 gi|518653200|ref|YP_008142720.1| - 0.44 10.0 3.0 1.3 8.4 0.0 2.4 2 0 0 2 2 2 0 RecR protein Aegerolysin PF06355.8 gi|518653202|ref|YP_008142722.1| - 0.067 13.0 0.2 0.072 12.9 0.1 1.0 1 0 0 1 1 1 0 Aegerolysin Acetyltransf_7 PF13508.1 gi|518653203|ref|YP_008142723.1| - 0.096 12.8 0.0 0.2 11.8 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FGGY_N PF00370.16 gi|518653204|ref|YP_008142724.1| - 5.1e-65 219.1 0.0 6.9e-65 218.7 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.11 gi|518653204|ref|YP_008142724.1| - 9.1e-46 155.9 0.4 9e-45 152.7 0.1 2.0 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.15 gi|518653204|ref|YP_008142724.1| - 0.00059 19.2 0.0 0.0014 17.9 0.0 1.7 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Peptidase_M13_N PF05649.8 gi|518653205|ref|YP_008142725.1| - 4.2e-102 342.1 4.4 5.9e-102 341.6 3.0 1.2 1 0 0 1 1 1 1 Peptidase family M13 Peptidase_M13 PF01431.16 gi|518653205|ref|YP_008142725.1| - 1.8e-56 190.5 0.0 3.5e-56 189.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M13 GDI PF00996.13 gi|518653205|ref|YP_008142725.1| - 0.019 13.2 0.0 0.12 10.6 0.0 2.0 1 1 1 2 2 2 0 GDP dissociation inhibitor Peptidase_M48 PF01435.13 gi|518653205|ref|YP_008142725.1| - 0.073 12.6 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Peptidase family M48 DUF4460 PF14687.1 gi|518653205|ref|YP_008142725.1| - 2.1 8.1 5.8 0.27 11.0 0.3 2.3 3 1 0 3 3 3 0 Domain of unknown function (DUF4460) NTP_transf_2 PF01909.18 gi|518653206|ref|YP_008142726.1| - 2.8e-08 33.9 0.1 4e-08 33.4 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|518653206|ref|YP_008142726.1| - 0.0073 16.3 0.0 0.01 15.9 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase beta palm DUF294 PF03445.8 gi|518653206|ref|YP_008142726.1| - 0.14 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 HEPN PF05168.9 gi|518653207|ref|YP_008142727.1| - 3.9e-28 97.7 0.5 4.7e-28 97.4 0.3 1.0 1 0 0 1 1 1 1 HEPN domain DUF4398 PF14346.1 gi|518653207|ref|YP_008142727.1| - 0.035 14.1 0.5 1.2 9.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4398) HAD_2 PF13419.1 gi|518653208|ref|YP_008142728.1| - 6e-22 78.7 0.0 7.1e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|518653208|ref|YP_008142728.1| - 3.8e-11 43.8 0.8 8.2e-09 36.1 0.1 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|518653208|ref|YP_008142728.1| - 1.4e-09 38.4 0.0 1.8e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|518653208|ref|YP_008142728.1| - 2.7e-09 36.6 0.1 5.7e-09 35.5 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Acid_PPase PF12689.2 gi|518653208|ref|YP_008142728.1| - 7.4e-06 25.7 0.0 5.6e-05 22.8 0.0 2.4 1 1 0 1 1 1 1 Acid Phosphatase NIF PF03031.13 gi|518653208|ref|YP_008142728.1| - 0.011 15.4 0.0 0.091 12.4 0.0 2.1 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase Hydrolase_6 PF13344.1 gi|518653208|ref|YP_008142728.1| - 0.046 13.5 0.1 0.28 11.1 0.1 2.1 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|518653208|ref|YP_008142728.1| - 0.097 12.2 0.6 8.1 5.9 0.2 2.8 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.9 gi|518653208|ref|YP_008142728.1| - 0.27 10.5 1.3 0.55 9.5 0.0 1.9 2 1 0 2 2 2 0 HAD superfamily, subfamily IIIB (Acid phosphatase) MFS_1 PF07690.11 gi|518653209|ref|YP_008142729.1| - 1.5e-54 185.0 94.0 6.1e-35 120.5 15.9 2.8 1 1 2 3 3 3 3 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|518653209|ref|YP_008142729.1| - 5e-09 35.2 42.9 1.2e-08 33.9 6.1 4.1 2 1 2 4 4 4 3 Sugar (and other) transporter MFS_3 PF05977.8 gi|518653209|ref|YP_008142729.1| - 0.00019 19.6 6.3 0.00019 19.6 4.4 2.6 2 1 0 2 2 2 2 Transmembrane secretion effector FA_desaturase PF00487.19 gi|518653209|ref|YP_008142729.1| - 3.9 6.8 9.5 1.9 7.8 4.0 2.3 1 1 2 3 3 3 0 Fatty acid desaturase PdxA PF04166.7 gi|518653210|ref|YP_008142730.1| - 5.1e-82 275.4 2.3 6.1e-82 275.1 1.6 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Herpes_UL21 PF03252.8 gi|518653212|ref|YP_008142732.1| - 0.012 14.1 0.0 0.016 13.6 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL21 Sugar_tr PF00083.19 gi|518653213|ref|YP_008142733.1| - 1.4e-18 66.7 24.0 7e-18 64.4 16.6 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.11 gi|518653213|ref|YP_008142733.1| - 1.5e-14 53.5 32.6 1.5e-14 53.5 22.6 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily CoA_binding_3 PF13727.1 gi|518653213|ref|YP_008142733.1| - 0.74 9.6 9.5 0.8 9.5 0.1 3.1 2 1 0 2 2 2 0 CoA-binding domain MFS_2 PF13347.1 gi|518653213|ref|YP_008142733.1| - 1.5 7.0 36.5 0.13 10.6 9.3 3.2 2 1 0 2 2 2 0 MFS/sugar transport protein Asp_Glu_race PF01177.17 gi|518653214|ref|YP_008142734.1| - 3e-36 125.3 0.1 3.4e-36 125.1 0.1 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase AroM PF07302.6 gi|518653214|ref|YP_008142734.1| - 0.0082 15.5 0.2 0.023 14.0 0.1 1.7 2 0 0 2 2 2 1 AroM protein Pyridoxal_deC PF00282.14 gi|518653215|ref|YP_008142735.1| - 1.2e-29 102.8 0.0 1.8e-29 102.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|518653215|ref|YP_008142735.1| - 5.4e-10 38.5 0.0 1.1e-09 37.4 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|518653215|ref|YP_008142735.1| - 4.9e-07 29.1 0.0 8.4e-07 28.3 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family PALP PF00291.20 gi|518653216|ref|YP_008142736.1| - 1.5e-56 191.8 0.1 1.8e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Glyco_trans_1_4 PF13692.1 gi|518653217|ref|YP_008142737.1| - 1.1e-18 67.6 0.0 3.5e-18 66.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|518653217|ref|YP_008142737.1| - 0.00051 20.2 0.0 0.012 15.8 0.0 2.6 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|518653217|ref|YP_008142737.1| - 0.0012 18.2 0.0 0.004 16.6 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferases group 1 KaiC PF06745.8 gi|518653218|ref|YP_008142738.1| - 1.5e-33 115.8 3.0 2.3e-33 115.2 2.1 1.3 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|518653218|ref|YP_008142738.1| - 2.3e-06 27.1 0.0 4.7e-06 26.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|518653218|ref|YP_008142738.1| - 1.5e-05 24.0 0.0 2.5e-05 23.3 0.0 1.5 1 1 0 1 1 1 1 Type II/IV secretion system protein AAA_18 PF13238.1 gi|518653218|ref|YP_008142738.1| - 0.00055 20.2 0.5 0.0021 18.3 0.3 2.1 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.10 gi|518653218|ref|YP_008142738.1| - 0.0011 18.1 0.1 0.0025 16.8 0.1 1.7 1 0 0 1 1 1 1 Anion-transporting ATPase SRP54 PF00448.17 gi|518653218|ref|YP_008142738.1| - 0.0013 18.1 0.0 0.0029 17.0 0.0 1.6 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain ABC_tran PF00005.22 gi|518653218|ref|YP_008142738.1| - 0.0014 18.9 0.1 0.0032 17.7 0.1 1.7 1 0 0 1 1 1 1 ABC transporter AAA_17 PF13207.1 gi|518653218|ref|YP_008142738.1| - 0.0073 17.1 0.9 0.015 16.1 0.1 2.0 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|518653218|ref|YP_008142738.1| - 0.015 14.3 0.0 0.027 13.5 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_29 PF13555.1 gi|518653218|ref|YP_008142738.1| - 0.018 14.5 0.3 0.044 13.3 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain CbiA PF01656.18 gi|518653218|ref|YP_008142738.1| - 0.041 13.2 2.0 0.1 11.9 1.4 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DEAD PF00270.24 gi|518653218|ref|YP_008142738.1| - 0.063 12.7 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase YxiJ PF14176.1 gi|518653218|ref|YP_008142738.1| - 0.066 13.3 1.1 0.35 10.9 0.3 2.4 2 0 0 2 2 2 0 YxiJ-like protein DUF87 PF01935.12 gi|518653218|ref|YP_008142738.1| - 0.33 10.7 4.7 3 7.5 3.4 2.3 1 1 0 1 1 1 0 Domain of unknown function DUF87 Glyco_tranf_2_3 PF13641.1 gi|518653219|ref|YP_008142739.1| - 2.5e-28 99.4 0.0 3.3e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|518653219|ref|YP_008142739.1| - 2.4e-23 82.8 2.1 2.4e-23 82.8 1.5 2.6 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 gi|518653219|ref|YP_008142739.1| - 4.6e-19 68.7 0.3 7.7e-19 68.0 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|518653219|ref|YP_008142739.1| - 1.7e-11 43.7 0.0 2.6e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|518653219|ref|YP_008142739.1| - 5.7e-09 35.4 1.4 8.4e-09 34.9 1.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|518653219|ref|YP_008142739.1| - 0.0059 16.9 0.0 0.014 15.6 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 DUF2976 PF11190.3 gi|518653219|ref|YP_008142739.1| - 0.058 12.9 0.1 0.058 12.9 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) ISK_Channel PF02060.10 gi|518653219|ref|YP_008142739.1| - 0.44 10.1 2.3 0.52 9.9 0.3 2.0 1 1 1 2 2 2 0 Slow voltage-gated potassium channel tRNA-synt_1e PF01406.14 gi|518653220|ref|YP_008142740.1| - 3.3e-118 394.1 2.4 3.3e-118 394.1 1.6 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|518653220|ref|YP_008142740.1| - 1.1e-16 60.5 11.9 4.1e-10 38.8 1.2 2.6 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 gi|518653220|ref|YP_008142740.1| - 1.1e-09 36.8 0.1 1e-05 23.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.13 gi|518653220|ref|YP_008142740.1| - 0.0011 17.7 0.4 0.0011 17.7 0.3 3.2 3 1 1 4 4 4 1 tRNA synthetases class I (K) Mut7-C PF01927.11 gi|518653220|ref|YP_008142740.1| - 0.065 13.2 0.1 0.73 9.7 0.0 2.4 2 1 0 2 2 2 0 Mut7-C RNAse domain RNA_polI_A14 PF08203.6 gi|518653220|ref|YP_008142740.1| - 0.18 12.0 0.3 0.67 10.2 0.0 2.1 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 Isochorismatase PF00857.15 gi|518653221|ref|YP_008142741.1| - 4.1e-35 121.2 0.0 4.5e-35 121.1 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family QRPTase_C PF01729.14 gi|518653222|ref|YP_008142742.1| - 5.6e-20 71.5 0.0 8.5e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.14 gi|518653222|ref|YP_008142742.1| - 0.0018 17.4 0.0 0.003 16.7 0.0 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Acyltransferase PF01553.16 gi|518653222|ref|YP_008142742.1| - 0.042 13.2 0.0 2.3 7.6 0.0 2.3 1 1 1 2 2 2 0 Acyltransferase His_biosynth PF00977.16 gi|518653222|ref|YP_008142742.1| - 0.047 12.9 0.0 0.077 12.2 0.0 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein NAPRTase PF04095.11 gi|518653222|ref|YP_008142742.1| - 0.12 11.5 0.2 3.1 7.0 0.1 2.3 1 1 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) family AA_permease PF00324.16 gi|518653223|ref|YP_008142743.1| - 8.8e-29 100.1 62.1 1.2e-28 99.7 43.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|518653223|ref|YP_008142743.1| - 2.1e-23 82.5 70.0 6.4e-23 80.9 48.6 1.6 1 1 0 1 1 1 1 Amino acid permease UPF0697 PF15117.1 gi|518653223|ref|YP_008142743.1| - 0.26 11.0 2.5 4.6 7.0 0.1 2.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0697 DUF4147 PF13660.1 gi|518653224|ref|YP_008142744.1| - 1e-49 168.8 0.0 2.6e-49 167.4 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4147) MOFRL PF05161.8 gi|518653224|ref|YP_008142744.1| - 7.6e-31 106.4 1.9 1.6e-30 105.3 1.3 1.6 1 0 0 1 1 1 1 MOFRL family Thermopsin PF05317.6 gi|518653226|ref|YP_008142746.1| - 2.6e-60 203.6 22.2 2.6e-60 203.6 15.4 2.9 2 1 1 3 3 3 1 Thermopsin DUF1214 PF06742.6 gi|518653226|ref|YP_008142746.1| - 0.065 13.7 4.5 0.82 10.1 0.1 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1214) DUF1814 PF08843.6 gi|518653227|ref|YP_008142747.1| - 4.1e-20 72.5 0.0 5.3e-20 72.2 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF1814) DUF4095 PF13338.1 gi|518653228|ref|YP_008142748.1| - 7e-12 45.5 0.0 1.1e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4095) DUF1814 PF08843.6 gi|518653229|ref|YP_008142749.1| - 2.9e-19 69.7 0.0 3.5e-19 69.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF1814) DUF4095 PF13338.1 gi|518653230|ref|YP_008142750.1| - 3.7e-15 56.1 0.0 5.3e-15 55.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4095) MFS_1 PF07690.11 gi|518653231|ref|YP_008142751.1| - 4e-27 94.8 37.1 6.8e-26 90.8 22.0 2.4 2 1 0 2 2 2 2 Major Facilitator Superfamily Fzo_mitofusin PF04799.8 gi|518653231|ref|YP_008142751.1| - 1.3 8.3 5.4 0.23 10.8 0.7 1.9 2 0 0 2 2 2 0 fzo-like conserved region OrfB_Zn_ribbon PF07282.6 gi|518653232|ref|YP_008142752.1| - 2.4e-12 46.3 0.1 2.4e-12 46.3 0.1 1.9 2 0 0 2 2 2 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|518653232|ref|YP_008142752.1| - 0.0006 19.0 0.9 0.024 13.9 1.0 2.4 2 0 0 2 2 2 1 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|518653232|ref|YP_008142752.1| - 0.041 13.1 1.8 0.55 9.5 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|518653232|ref|YP_008142752.1| - 0.063 12.7 2.1 0.15 11.5 1.5 1.7 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit RecR PF02132.10 gi|518653232|ref|YP_008142752.1| - 0.08 12.3 1.4 2.2 7.7 0.0 2.4 2 0 0 2 2 2 0 RecR protein HypA PF01155.14 gi|518653232|ref|YP_008142752.1| - 0.11 12.2 0.0 0.26 10.9 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_5 PF13719.1 gi|518653232|ref|YP_008142752.1| - 0.36 10.4 5.9 0.41 10.2 2.2 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|518653232|ref|YP_008142752.1| - 0.63 9.7 6.5 0.81 9.4 2.6 2.7 2 1 0 2 2 2 0 zinc-ribbon domain DUF1451 PF07295.6 gi|518653232|ref|YP_008142752.1| - 0.65 9.7 7.6 0.31 10.7 1.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1451) DUF1610 PF07754.6 gi|518653232|ref|YP_008142752.1| - 1.7 8.8 6.9 0.096 12.8 0.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) MFS_1 PF07690.11 gi|518653233|ref|YP_008142753.1| - 0.0003 19.6 4.5 0.00038 19.2 3.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TadE PF07811.7 gi|518653233|ref|YP_008142753.1| - 1.2 9.0 5.0 3.9 7.4 0.5 2.5 2 0 0 2 2 2 0 TadE-like protein DUF4095 PF13338.1 gi|518653234|ref|YP_008142754.1| - 1e-09 38.5 0.0 1.5e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4095) DUF1814 PF08843.6 gi|518653235|ref|YP_008142755.1| - 1e-05 25.4 0.1 1.2e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF1814) TENA_THI-4 PF03070.11 gi|518653236|ref|YP_008142756.1| - 6.4e-31 107.7 1.8 8.6e-31 107.3 1.2 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Haem_oxygenas_2 PF14518.1 gi|518653236|ref|YP_008142756.1| - 0.00087 19.4 0.0 0.0018 18.3 0.0 1.5 1 0 0 1 1 1 1 Iron-containing redox enzyme HPS3_C PF14763.1 gi|518653236|ref|YP_008142756.1| - 0.028 13.3 0.1 0.054 12.4 0.0 1.4 2 0 0 2 2 2 0 Hermansky-Pudlak syndrome 3, C-terminal Ta0938 PF11494.3 gi|518653237|ref|YP_008142757.1| - 1.6e-20 73.1 0.6 1.7e-20 73.0 0.4 1.0 1 0 0 1 1 1 1 Ta0938 AAA_21 PF13304.1 gi|518653238|ref|YP_008142758.1| - 1.7e-23 84.0 19.7 3.8e-22 79.5 13.7 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|518653238|ref|YP_008142758.1| - 6.2e-14 51.8 28.3 4.4e-10 39.1 13.9 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|518653238|ref|YP_008142758.1| - 8.2e-10 39.3 9.4 1.4e-09 38.6 6.5 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|518653238|ref|YP_008142758.1| - 2e-09 37.0 9.5 4.6e-09 35.8 2.7 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF2813 PF11398.3 gi|518653238|ref|YP_008142758.1| - 1.7e-05 24.1 1.8 0.016 14.3 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_22 PF13401.1 gi|518653238|ref|YP_008142758.1| - 3.7e-05 23.8 0.5 0.21 11.7 0.1 3.2 3 0 0 3 3 3 1 AAA domain ABC_tran PF00005.22 gi|518653238|ref|YP_008142758.1| - 0.00054 20.2 0.1 0.019 15.2 0.0 2.5 3 0 0 3 3 3 1 ABC transporter AAA_29 PF13555.1 gi|518653238|ref|YP_008142758.1| - 0.0036 16.7 0.0 0.0093 15.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain DEAD PF00270.24 gi|518653238|ref|YP_008142758.1| - 0.077 12.4 1.2 2.3 7.6 0.1 2.9 2 1 0 2 2 2 0 DEAD/DEAH box helicase Zeta_toxin PF06414.7 gi|518653238|ref|YP_008142758.1| - 0.11 11.6 0.0 0.27 10.3 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin FAD_syn PF06574.7 gi|518653238|ref|YP_008142758.1| - 0.14 11.7 0.3 1.7 8.2 0.1 2.2 2 0 0 2 2 2 0 FAD synthetase MFS_1 PF07690.11 gi|518653240|ref|YP_008142760.1| - 1.8e-30 105.8 45.4 4.7e-20 71.6 14.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|518653240|ref|YP_008142760.1| - 0.014 13.5 13.7 0.0057 14.8 5.0 2.2 2 0 0 2 2 2 0 Transmembrane secretion effector TetR PF13972.1 gi|518653240|ref|YP_008142760.1| - 0.083 12.3 0.2 0.27 10.6 0.1 1.8 1 1 1 2 2 2 0 Bacterial transcriptional repressor NdhL PF10716.4 gi|518653241|ref|YP_008142761.1| - 0.58 9.9 5.2 0.56 10.0 2.7 1.8 1 1 0 1 1 1 0 NADH dehydrogenase transmembrane subunit DUF3427 PF11907.3 gi|518653242|ref|YP_008142762.1| - 1.7e-49 168.2 2.2 2.6e-49 167.6 1.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3427) Helicase_C PF00271.26 gi|518653242|ref|YP_008142762.1| - 7.9e-07 28.8 0.0 2.2e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain OrfB_Zn_ribbon PF07282.6 gi|518653243|ref|YP_008142763.1| - 9.5e-22 76.4 0.1 1.8e-21 75.5 0.1 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|518653243|ref|YP_008142763.1| - 9.6e-13 48.0 0.3 1.6e-12 47.3 0.2 1.3 1 0 0 1 1 1 1 Probable transposase TF_Zn_Ribbon PF08271.7 gi|518653243|ref|YP_008142763.1| - 0.0046 16.2 0.3 0.0093 15.2 0.2 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding ResIII PF04851.10 gi|518653244|ref|YP_008142764.1| - 8.8e-26 90.8 0.1 3e-25 89.1 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit PLDc_2 PF13091.1 gi|518653244|ref|YP_008142764.1| - 4.2e-19 68.5 1.1 2.2e-18 66.1 0.3 2.5 2 0 0 2 2 2 1 PLD-like domain RE_NgoFVII PF09565.5 gi|518653244|ref|YP_008142764.1| - 1.7e-08 33.7 0.4 1.7e-08 33.7 0.3 1.7 2 0 0 2 2 2 1 NgoFVII restriction endonuclease DEAD PF00270.24 gi|518653244|ref|YP_008142764.1| - 9e-06 25.2 0.0 3.3e-05 23.4 0.0 2.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|518653244|ref|YP_008142764.1| - 0.11 12.6 0.3 1.1 9.3 0.2 2.4 1 1 0 1 1 1 0 AAA domain eIF3_p135 PF12807.2 gi|518653245|ref|YP_008142765.1| - 0.038 13.9 0.5 0.078 12.9 0.2 1.6 1 1 1 2 2 2 0 Translation initiation factor eIF3 subunit 135 RPW8 PF05659.6 gi|518653245|ref|YP_008142765.1| - 0.067 12.7 0.1 0.11 12.0 0.1 1.3 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 TauE PF01925.14 gi|518653246|ref|YP_008142766.1| - 6.5e-39 133.8 33.1 7.7e-39 133.5 22.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Epiglycanin_C PF14654.1 gi|518653246|ref|YP_008142766.1| - 0.026 14.5 0.7 0.026 14.5 0.5 2.2 2 1 1 3 3 3 0 Mucin, catalytic, TM and cytoplasmic tail region Adeno_E3_CR2 PF02439.10 gi|518653246|ref|YP_008142766.1| - 0.39 10.2 0.0 0.39 10.2 0.0 5.9 7 0 0 7 7 7 0 Adenovirus E3 region protein CR2 MFS_1 PF07690.11 gi|518653247|ref|YP_008142767.1| - 3.7e-19 68.6 49.0 3.7e-19 68.6 34.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Arch_ATPase PF01637.13 gi|518653248|ref|YP_008142768.1| - 1.9e-28 99.7 5.0 5e-28 98.3 3.4 1.8 1 0 0 1 1 1 1 Archaeal ATPase DUF234 PF03008.9 gi|518653248|ref|YP_008142768.1| - 3.5e-20 72.0 0.2 1.7e-19 69.8 0.1 2.3 1 1 0 1 1 1 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.1 gi|518653248|ref|YP_008142768.1| - 1.5e-09 37.7 1.0 1.5e-09 37.7 0.7 2.4 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|518653248|ref|YP_008142768.1| - 2.5e-05 24.4 0.1 5.4e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|518653248|ref|YP_008142768.1| - 0.0089 16.0 0.0 0.016 15.1 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain HTH_34 PF13601.1 gi|518653248|ref|YP_008142768.1| - 0.014 15.4 0.3 0.045 13.7 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|518653248|ref|YP_008142768.1| - 0.018 14.6 0.0 0.042 13.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family AAA PF00004.24 gi|518653248|ref|YP_008142768.1| - 0.062 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SBP_bac_5 PF00496.17 gi|518653250|ref|YP_008142770.1| - 6.7e-37 127.1 0.7 1.3e-36 126.2 0.5 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HEPN PF05168.9 gi|518653251|ref|YP_008142771.1| - 2.4e-18 66.1 1.7 2.7e-18 65.9 1.1 1.0 1 0 0 1 1 1 1 HEPN domain Pterin_bind PF00809.17 gi|518653251|ref|YP_008142771.1| - 0.097 12.0 0.1 0.097 12.0 0.0 1.3 1 1 0 1 1 1 0 Pterin binding enzyme DUF3502 PF12010.3 gi|518653251|ref|YP_008142771.1| - 0.12 12.3 0.2 13 5.7 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3502) NTP_transf_2 PF01909.18 gi|518653252|ref|YP_008142772.1| - 4.3e-09 36.5 0.2 5.7e-09 36.1 0.1 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|518653252|ref|YP_008142772.1| - 0.0075 16.3 0.0 0.009 16.0 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm DUF1188 PF06690.6 gi|518653252|ref|YP_008142772.1| - 0.052 12.6 0.1 0.06 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) DUF4522 PF15022.1 gi|518653252|ref|YP_008142772.1| - 0.081 12.6 0.9 0.15 11.7 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4522) CbiZ PF01955.13 gi|518653253|ref|YP_008142773.1| - 8.9e-33 113.6 0.0 1.1e-32 113.4 0.0 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase Peripla_BP_2 PF01497.13 gi|518653254|ref|YP_008142774.1| - 6.8e-22 77.7 0.0 9.6e-22 77.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein IMPDH PF00478.20 gi|518653254|ref|YP_008142774.1| - 0.1 11.4 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain FecCD PF01032.13 gi|518653255|ref|YP_008142775.1| - 4.8e-79 265.4 41.5 5.8e-79 265.1 28.7 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.12 gi|518653255|ref|YP_008142775.1| - 0.034 13.4 29.9 0.0037 16.6 17.1 2.1 1 1 0 1 1 1 0 ABC 3 transport family DUF3488 PF11992.3 gi|518653255|ref|YP_008142775.1| - 0.3 9.6 7.9 1.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) ABC_tran PF00005.22 gi|518653256|ref|YP_008142776.1| - 1.2e-24 87.1 0.1 1.7e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|518653256|ref|YP_008142776.1| - 1.5e-08 34.9 4.2 9.2e-06 25.8 0.2 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|518653256|ref|YP_008142776.1| - 8.5e-06 25.1 5.1 0.00079 18.7 3.5 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Miro PF08477.8 gi|518653256|ref|YP_008142776.1| - 0.013 16.0 0.2 0.034 14.6 0.1 1.8 1 1 1 2 2 2 0 Miro-like protein MobB PF03205.9 gi|518653256|ref|YP_008142776.1| - 0.02 14.6 1.3 0.71 9.5 0.2 2.5 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.1 gi|518653256|ref|YP_008142776.1| - 0.031 14.1 0.2 0.17 11.8 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MoeA_C PF03454.10 gi|518653256|ref|YP_008142776.1| - 0.032 14.1 0.0 0.056 13.4 0.0 1.4 1 0 0 1 1 1 0 MoeA C-terminal region (domain IV) AAA_29 PF13555.1 gi|518653256|ref|YP_008142776.1| - 0.035 13.6 0.1 0.065 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zot PF05707.7 gi|518653256|ref|YP_008142776.1| - 0.037 13.4 0.1 0.057 12.8 0.0 1.3 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) Zeta_toxin PF06414.7 gi|518653256|ref|YP_008142776.1| - 0.04 13.0 0.0 0.062 12.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.1 gi|518653256|ref|YP_008142776.1| - 0.043 12.8 8.7 0.22 10.5 1.8 2.1 1 1 0 2 2 2 0 AAA ATPase domain Arch_ATPase PF01637.13 gi|518653256|ref|YP_008142776.1| - 0.059 13.0 1.4 0.32 10.6 1.0 1.9 1 1 0 1 1 1 0 Archaeal ATPase AAA_22 PF13401.1 gi|518653256|ref|YP_008142776.1| - 0.12 12.5 1.0 0.44 10.6 0.7 1.9 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|518653256|ref|YP_008142776.1| - 0.13 11.7 0.9 2 7.9 0.6 2.2 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.1 gi|518653256|ref|YP_008142776.1| - 0.16 11.5 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|518653256|ref|YP_008142776.1| - 0.18 12.1 4.8 1.4 9.1 3.4 2.1 1 1 0 1 1 1 0 AAA domain YbjQ_1 PF01906.12 gi|518653257|ref|YP_008142777.1| - 1.5e-33 115.3 5.3 1.6e-33 115.2 3.7 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF4156 PF13698.1 gi|518653257|ref|YP_008142777.1| - 0.047 13.5 1.0 0.21 11.4 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4156) AA_permease_2 PF13520.1 gi|518653258|ref|YP_008142778.1| - 2e-44 151.7 72.5 3.3e-44 151.1 50.3 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|518653258|ref|YP_008142778.1| - 1.3e-41 142.4 67.9 1.8e-41 141.9 47.1 1.2 1 1 0 1 1 1 1 Amino acid permease Spore_permease PF03845.8 gi|518653258|ref|YP_008142778.1| - 5.2e-10 38.4 34.5 5.2e-10 38.4 23.9 2.4 1 1 1 2 2 2 1 Spore germination protein Acetyltransf_4 PF13420.1 gi|518653258|ref|YP_008142778.1| - 0.12 12.2 0.3 0.22 11.4 0.2 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AA_permease_2 PF13520.1 gi|518653259|ref|YP_008142779.1| - 1.1e-22 80.2 66.1 2.6e-22 78.9 45.9 1.5 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|518653259|ref|YP_008142779.1| - 3.2e-20 71.9 58.7 4.7e-20 71.3 40.7 1.3 1 0 0 1 1 1 1 Amino acid permease Pox_A9 PF04835.7 gi|518653259|ref|YP_008142779.1| - 0.0051 16.6 1.6 0.053 13.4 1.1 2.9 1 0 0 1 1 1 1 A9 protein conserved region DegT_DnrJ_EryC1 PF01041.12 gi|518653260|ref|YP_008142780.1| - 4.5e-121 404.3 0.0 5e-121 404.1 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 gi|518653260|ref|YP_008142780.1| - 1.3e-10 40.8 0.0 1.9e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|518653260|ref|YP_008142780.1| - 6.5e-06 25.1 0.0 1e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|518653260|ref|YP_008142780.1| - 6.3e-05 22.2 0.0 0.00011 21.5 0.0 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase DUF1967 PF09269.6 gi|518653260|ref|YP_008142780.1| - 0.0068 16.0 0.0 0.14 11.8 0.0 2.8 3 0 0 3 3 3 1 Domain of unknown function (DUF1967) Cys_Met_Meta_PP PF01053.15 gi|518653260|ref|YP_008142780.1| - 0.0084 14.4 0.0 0.012 13.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Epimerase PF01370.16 gi|518653261|ref|YP_008142781.1| - 6.1e-55 186.2 0.0 8.4e-55 185.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518653261|ref|YP_008142781.1| - 3.5e-10 39.2 0.0 5.9e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.8 gi|518653261|ref|YP_008142781.1| - 2.2e-05 23.8 0.0 3.7e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.1 gi|518653261|ref|YP_008142781.1| - 0.0021 18.0 0.0 0.0041 17.1 0.0 1.4 1 0 0 1 1 1 1 NADH(P)-binding Polysacc_synt_2 PF02719.10 gi|518653261|ref|YP_008142781.1| - 0.02 13.7 0.0 0.03 13.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|518653261|ref|YP_008142781.1| - 0.069 12.0 0.0 0.18 10.7 0.0 1.6 1 1 0 1 1 1 0 Male sterility protein Epimerase_Csub PF13950.1 gi|518653261|ref|YP_008142781.1| - 0.079 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 UDP-glucose 4-epimerase C-term subunit Glycos_transf_1 PF00534.15 gi|518653262|ref|YP_008142782.1| - 5e-25 87.8 0.0 9.4e-25 86.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653262|ref|YP_008142782.1| - 2.9e-07 30.6 0.0 6.8e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|518653263|ref|YP_008142783.1| - 6.1e-20 71.3 0.3 9.5e-20 70.7 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653263|ref|YP_008142783.1| - 4.3e-09 36.6 0.0 8.5e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 ISAV_HA PF06215.6 gi|518653263|ref|YP_008142783.1| - 0.055 11.7 0.1 0.086 11.1 0.0 1.2 1 0 0 1 1 1 0 Infectious salmon anaemia virus haemagglutinin Glycos_transf_1 PF00534.15 gi|518653264|ref|YP_008142784.1| - 9.5e-12 44.6 0.0 1.7e-11 43.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653264|ref|YP_008142784.1| - 2e-07 31.2 0.0 3.3e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2079 PF09852.4 gi|518653265|ref|YP_008142785.1| - 8.4e-63 212.6 37.3 8.4e-63 212.6 25.8 1.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2079) Pyr_redox_2 PF07992.9 gi|518653266|ref|YP_008142786.1| - 2.8e-33 115.4 0.0 5.9e-33 114.4 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|518653266|ref|YP_008142786.1| - 2.3e-28 98.3 0.2 4.3e-28 97.5 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|518653266|ref|YP_008142786.1| - 7.9e-18 64.6 0.6 3.7e-17 62.4 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|518653266|ref|YP_008142786.1| - 1.2e-07 30.9 0.3 1.7e-06 27.1 0.5 2.4 2 1 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.1 gi|518653266|ref|YP_008142786.1| - 2.7e-06 27.5 0.0 9.9e-06 25.7 0.0 2.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|518653266|ref|YP_008142786.1| - 0.00085 17.8 3.3 0.31 9.4 0.4 4.0 3 2 1 5 5 5 1 HI0933-like protein 3HCDH_N PF02737.13 gi|518653266|ref|YP_008142786.1| - 0.0015 18.2 0.0 0.017 14.8 0.0 2.5 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.1 gi|518653266|ref|YP_008142786.1| - 0.003 16.5 0.0 0.034 13.0 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 gi|518653266|ref|YP_008142786.1| - 0.0046 15.9 0.0 0.21 10.4 0.0 2.6 3 0 0 3 3 3 1 FAD dependent oxidoreductase F420_oxidored PF03807.12 gi|518653266|ref|YP_008142786.1| - 0.0052 17.1 1.1 1.2 9.6 0.0 3.4 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|518653266|ref|YP_008142786.1| - 0.0098 15.9 0.3 0.1 12.7 0.0 2.4 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.1 gi|518653266|ref|YP_008142786.1| - 0.014 15.6 0.0 0.2 11.9 0.0 2.6 3 0 0 3 3 2 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.14 gi|518653266|ref|YP_008142786.1| - 0.027 13.6 0.7 0.29 10.2 0.0 2.5 2 1 1 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_9 PF13454.1 gi|518653266|ref|YP_008142786.1| - 0.042 13.6 0.0 8.4 6.1 0.0 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_binding_2 PF00890.19 gi|518653266|ref|YP_008142786.1| - 0.079 11.7 3.1 0.79 8.4 1.0 2.5 3 0 0 3 3 3 0 FAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|518653266|ref|YP_008142786.1| - 0.17 11.5 4.4 0.22 11.2 0.0 2.8 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_8 PF13450.1 gi|518653266|ref|YP_008142786.1| - 0.24 11.4 1.2 10 6.2 0.0 2.6 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain HMA PF00403.21 gi|518653267|ref|YP_008142787.1| - 6.3e-10 39.0 0.1 7.1e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain Glycos_transf_2 PF00535.21 gi|518653268|ref|YP_008142788.1| - 5.3e-06 26.2 4.9 9.3e-06 25.4 3.4 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Polysacc_synt PF01943.12 gi|518653269|ref|YP_008142789.1| - 7.1e-17 61.5 47.8 7.1e-17 61.5 33.1 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|518653269|ref|YP_008142789.1| - 2.9e-16 59.7 39.7 2.9e-16 59.7 27.5 2.8 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|518653269|ref|YP_008142789.1| - 5.3e-12 45.7 21.2 5.3e-12 45.7 14.7 4.3 1 1 3 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|518653269|ref|YP_008142789.1| - 1.5e-07 30.2 49.9 1.5e-07 30.2 34.6 1.6 2 0 0 2 2 2 1 MviN-like protein MatE PF01554.13 gi|518653269|ref|YP_008142789.1| - 6.9e-05 22.5 11.4 6.9e-05 22.5 7.9 3.9 3 1 1 4 4 4 2 MatE Glycos_transf_2 PF00535.21 gi|518653270|ref|YP_008142790.1| - 1.9e-10 40.6 0.7 4.3e-10 39.5 0.3 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518653270|ref|YP_008142790.1| - 1.4e-05 25.0 0.0 1.9e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|518653270|ref|YP_008142790.1| - 1.8e-05 24.9 0.0 3.4e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 NTP_transferase PF00483.18 gi|518653270|ref|YP_008142790.1| - 0.11 11.7 0.1 0.16 11.2 0.1 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase FdhD-NarQ PF02634.10 gi|518653271|ref|YP_008142791.1| - 3.4e-74 249.2 0.0 4e-74 249.0 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family EcoR124_C PF12008.3 gi|518653272|ref|YP_008142792.1| - 0.098 11.8 0.7 0.22 10.6 0.5 1.6 1 1 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal Orexin_rec2 PF03827.8 gi|518653272|ref|YP_008142792.1| - 0.1 12.6 0.1 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Orexin receptor type 2 DUF1641 PF07849.6 gi|518653272|ref|YP_008142792.1| - 0.11 12.1 0.5 2.1 8.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1641) RPAP1_N PF08621.5 gi|518653272|ref|YP_008142792.1| - 0.14 11.8 0.9 0.46 10.1 0.1 2.1 2 0 0 2 2 2 0 RPAP1-like, N-terminal Molybdopterin PF00384.17 gi|518653273|ref|YP_008142793.1| - 3.1e-83 279.9 0.1 4.4e-83 279.4 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|518653273|ref|YP_008142793.1| - 1e-22 80.0 0.0 2.3e-22 78.9 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.11 gi|518653273|ref|YP_008142793.1| - 4.6e-17 61.5 1.0 4.6e-17 61.5 0.7 2.3 2 0 0 2 2 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_4 PF13510.1 gi|518653273|ref|YP_008142793.1| - 1.5e-12 47.1 0.0 3.2e-12 46.0 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.22 gi|518653273|ref|YP_008142793.1| - 4.8e-11 41.7 18.0 2.4e-06 26.9 1.5 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain NADH-G_4Fe-4S_3 PF10588.4 gi|518653273|ref|YP_008142793.1| - 6.4e-11 41.3 1.6 2.3e-10 39.5 1.1 2.0 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer4_6 PF12837.2 gi|518653273|ref|YP_008142793.1| - 1.7e-09 37.1 18.5 5.7e-06 25.9 1.8 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|518653273|ref|YP_008142793.1| - 1.2e-07 31.4 7.8 1.2e-07 31.4 5.4 3.1 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|518653273|ref|YP_008142793.1| - 1.4e-07 31.7 11.6 1.4e-07 31.7 8.0 3.6 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|518653273|ref|YP_008142793.1| - 1.9e-07 31.2 8.6 1.9e-07 31.2 5.9 3.6 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|518653273|ref|YP_008142793.1| - 2.9e-07 30.3 7.9 2.9e-07 30.3 5.5 2.8 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|518653273|ref|YP_008142793.1| - 3.5e-07 29.9 23.3 2.9e-06 26.9 7.7 3.5 2 2 1 3 3 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|518653273|ref|YP_008142793.1| - 1.7e-06 28.5 3.5 0.0099 16.4 0.5 3.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_2 PF12797.2 gi|518653273|ref|YP_008142793.1| - 3.9e-05 23.3 11.1 0.0009 19.0 1.0 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|518653273|ref|YP_008142793.1| - 0.00022 21.9 16.7 0.00044 20.9 1.6 3.9 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|518653273|ref|YP_008142793.1| - 0.064 13.6 21.7 0.55 10.6 3.9 3.4 2 2 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|518653273|ref|YP_008142793.1| - 0.087 13.2 14.1 1.9 8.9 2.5 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|518653273|ref|YP_008142793.1| - 0.11 13.1 27.4 0.17 12.5 5.4 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|518653273|ref|YP_008142793.1| - 2.6 8.5 25.5 0.066 13.6 2.6 3.3 2 1 0 3 3 2 0 4Fe-4S dicluster domain MobB PF03205.9 gi|518653275|ref|YP_008142795.1| - 5.1e-15 55.4 0.1 5.9e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.1 gi|518653275|ref|YP_008142795.1| - 0.0074 17.0 0.0 0.0087 16.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain PRK PF00485.13 gi|518653275|ref|YP_008142795.1| - 0.014 14.9 0.4 2.4 7.6 0.1 2.1 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_26 PF13500.1 gi|518653275|ref|YP_008142795.1| - 0.02 14.5 0.0 0.036 13.6 0.0 1.3 1 1 0 1 1 1 0 AAA domain PIG-H PF10181.4 gi|518653275|ref|YP_008142795.1| - 0.04 13.5 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component cobW PF02492.14 gi|518653275|ref|YP_008142795.1| - 0.059 12.8 0.1 0.086 12.2 0.1 1.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Arch_ATPase PF01637.13 gi|518653275|ref|YP_008142795.1| - 0.062 12.9 0.2 0.097 12.3 0.1 1.4 1 1 0 1 1 1 0 Archaeal ATPase RNA_helicase PF00910.17 gi|518653275|ref|YP_008142795.1| - 0.092 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_29 PF13555.1 gi|518653275|ref|YP_008142795.1| - 0.1 12.1 0.2 0.18 11.3 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|518653275|ref|YP_008142795.1| - 0.27 11.5 2.3 0.37 11.0 1.6 1.2 1 0 0 1 1 1 0 AAA domain NTP_transf_3 PF12804.2 gi|518653276|ref|YP_008142796.1| - 5e-10 39.6 0.0 6.6e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|518653276|ref|YP_008142796.1| - 0.00022 20.9 0.0 0.0061 16.2 0.0 2.2 1 1 0 1 1 1 1 Cytidylyltransferase CofC PF01983.11 gi|518653276|ref|YP_008142796.1| - 0.013 14.4 0.0 0.022 13.7 0.0 1.4 1 0 0 1 1 1 0 Guanylyl transferase CofC like Methylase_S PF01420.14 gi|518653276|ref|YP_008142796.1| - 0.028 14.4 1.0 0.028 14.4 0.7 1.6 2 0 0 2 2 2 0 Type I restriction modification DNA specificity domain MoeA_N PF03453.12 gi|518653277|ref|YP_008142797.1| - 2.4e-40 137.5 0.0 3.5e-40 137.0 0.0 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|518653277|ref|YP_008142797.1| - 4.5e-24 84.5 0.0 7.7e-24 83.7 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|518653277|ref|YP_008142797.1| - 0.00048 20.0 0.0 0.0027 17.6 0.0 2.2 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) DUF4179 PF13786.1 gi|518653277|ref|YP_008142797.1| - 0.00054 20.1 3.0 0.0017 18.5 0.3 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4179) MoeA_N PF03453.12 gi|518653278|ref|YP_008142798.1| - 4.9e-38 130.0 0.0 6.6e-38 129.6 0.0 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|518653278|ref|YP_008142798.1| - 9.7e-19 67.1 0.2 1.6e-18 66.5 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|518653278|ref|YP_008142798.1| - 1.5e-05 24.8 0.0 3.5e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) DeoRC PF00455.17 gi|518653278|ref|YP_008142798.1| - 0.05 13.2 0.0 2.7 7.6 0.0 2.3 2 0 0 2 2 2 0 DeoR C terminal sensor domain Arch_ATPase PF01637.13 gi|518653279|ref|YP_008142799.1| - 1.5e-13 51.0 0.1 1.6e-13 50.9 0.1 1.0 1 0 0 1 1 1 1 Archaeal ATPase AAA_14 PF13173.1 gi|518653279|ref|YP_008142799.1| - 1.1e-05 25.2 0.2 3.5e-05 23.7 0.0 1.7 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|518653279|ref|YP_008142799.1| - 0.00028 20.9 0.0 0.00032 20.7 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|518653279|ref|YP_008142799.1| - 0.001 19.2 0.0 0.0015 18.6 0.0 1.3 1 1 0 1 1 1 1 AAA domain DAP3 PF10236.4 gi|518653279|ref|YP_008142799.1| - 0.004 16.1 0.0 0.0045 15.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 Ras PF00071.17 gi|518653279|ref|YP_008142799.1| - 0.043 13.2 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Ras family Miro PF08477.8 gi|518653279|ref|YP_008142799.1| - 0.065 13.7 0.0 0.093 13.2 0.0 1.3 1 0 0 1 1 1 0 Miro-like protein NB-ARC PF00931.17 gi|518653279|ref|YP_008142799.1| - 0.088 11.6 0.0 0.093 11.5 0.0 1.0 1 0 0 1 1 1 0 NB-ARC domain Transposase_mut PF00872.13 gi|518653281|ref|YP_008142801.1| - 2.1e-60 204.2 1.3 2.4e-60 204.1 0.9 1.0 1 0 0 1 1 1 1 Transposase, Mutator family AAA_21 PF13304.1 gi|518653283|ref|YP_008142803.1| - 7.3e-25 88.5 25.0 7.3e-25 88.5 17.3 2.3 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|518653283|ref|YP_008142803.1| - 2.3e-22 79.6 33.0 1.8e-13 50.3 16.4 2.2 1 1 1 2 2 2 2 AAA ATPase domain DUF2813 PF11398.3 gi|518653283|ref|YP_008142803.1| - 8.7e-10 38.2 0.5 3.7e-07 29.5 0.0 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF2813) AAA_23 PF13476.1 gi|518653283|ref|YP_008142803.1| - 4.5e-07 30.4 16.2 2e-06 28.2 11.2 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|518653283|ref|YP_008142803.1| - 5.4e-05 22.5 6.6 0.00018 20.8 4.6 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Glyco_hydro_42C PF08533.5 gi|518653283|ref|YP_008142803.1| - 0.0048 16.3 0.1 0.77 9.3 0.0 2.5 2 0 0 2 2 2 1 Beta-galactosidase C-terminal domain AAA_29 PF13555.1 gi|518653283|ref|YP_008142803.1| - 0.0064 15.9 0.0 0.015 14.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Ist1 PF03398.9 gi|518653283|ref|YP_008142803.1| - 0.0085 15.5 0.0 0.055 12.8 0.0 2.0 2 0 0 2 2 2 1 Regulator of Vps4 activity in the MVB pathway ABC_tran PF00005.22 gi|518653283|ref|YP_008142803.1| - 0.013 15.7 0.1 0.11 12.8 0.0 2.3 2 1 1 3 3 3 0 ABC transporter Arch_ATPase PF01637.13 gi|518653283|ref|YP_008142803.1| - 0.025 14.2 2.3 0.033 13.8 0.4 2.1 2 1 1 3 3 3 0 Archaeal ATPase MMR_HSR1 PF01926.18 gi|518653283|ref|YP_008142803.1| - 0.2 11.6 1.6 0.5 10.3 1.1 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF4095 PF13338.1 gi|518653284|ref|YP_008142804.1| - 2.9e-15 56.4 0.0 4.2e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4095) DUF1814 PF08843.6 gi|518653285|ref|YP_008142805.1| - 5.1e-21 75.5 0.0 6.3e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF1814) EF1_GNE PF00736.14 gi|518653285|ref|YP_008142805.1| - 0.062 12.9 0.1 1.7 8.3 0.0 2.4 2 0 0 2 2 2 0 EF-1 guanine nucleotide exchange domain DUF3212 PF11486.3 gi|518653285|ref|YP_008142805.1| - 0.098 12.4 1.3 0.79 9.4 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3212) DUF2204 PF09970.4 gi|518653285|ref|YP_008142805.1| - 0.11 11.9 1.2 3.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Nucleotidyl transferase of unknown function (DUF2204) Asp_protease_2 PF13650.1 gi|518653287|ref|YP_008142807.1| - 0.00023 21.6 0.0 0.00052 20.4 0.0 1.6 1 1 0 1 1 1 1 Aspartyl protease RVP PF00077.15 gi|518653287|ref|YP_008142807.1| - 0.015 15.2 0.0 0.26 11.2 0.0 2.1 2 0 0 2 2 2 0 Retroviral aspartyl protease Secretin PF00263.16 gi|518653287|ref|YP_008142807.1| - 0.07 12.5 0.0 0.088 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial type II and III secretion system protein MCM_bind PF09739.4 gi|518653288|ref|YP_008142808.1| - 0.048 13.2 0.0 0.048 13.2 0.0 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor SNARE_assoc PF09335.6 gi|518653292|ref|YP_008142812.1| - 5.2e-07 29.9 6.5 5.2e-07 29.9 4.5 2.6 1 1 1 2 2 2 1 SNARE associated Golgi protein SieB PF14163.1 gi|518653292|ref|YP_008142812.1| - 0.0072 15.9 0.7 0.0072 15.9 0.5 2.5 3 0 0 3 3 3 1 Superinfection exclusion protein B DUF2929 PF11151.3 gi|518653292|ref|YP_008142812.1| - 0.045 13.8 1.2 0.045 13.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2929) DUF3341 PF11821.3 gi|518653292|ref|YP_008142812.1| - 0.05 13.0 1.0 9.9 5.5 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3341) DUF1673 PF07895.6 gi|518653292|ref|YP_008142812.1| - 1.5 8.3 6.6 0.2 11.1 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) P12 PF12669.2 gi|518653292|ref|YP_008142812.1| - 1.7 8.9 4.5 5.5 7.2 3.1 1.9 1 0 0 1 1 1 0 Virus attachment protein p12 family PARP_reg PF02877.9 gi|518653294|ref|YP_008142814.1| - 0.072 12.7 0.1 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase, regulatory domain DUF2079 PF09852.4 gi|518653295|ref|YP_008142815.1| - 5e-53 180.4 33.4 7.3e-53 179.8 23.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) Abhydrolase_9_N PF15420.1 gi|518653295|ref|YP_008142815.1| - 0.4 10.4 2.0 0.94 9.1 0.0 2.3 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus DDE_Tnp_1 PF01609.16 gi|518653297|ref|YP_008142817.1| - 4.6e-16 58.9 3.0 6.5e-16 58.5 2.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_5 PF13737.1 gi|518653297|ref|YP_008142817.1| - 3.8e-12 46.3 0.0 3e-11 43.4 0.0 2.1 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.1 gi|518653297|ref|YP_008142817.1| - 5.2e-06 26.2 1.9 0.0001 22.1 1.3 2.2 1 1 0 1 1 1 1 Transposase DDE domain PhoH PF02562.11 gi|518653297|ref|YP_008142817.1| - 0.028 13.6 0.1 0.06 12.5 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein La PF05383.12 gi|518653297|ref|YP_008142817.1| - 0.08 12.7 0.0 0.3 10.9 0.0 2.0 1 0 0 1 1 1 0 La domain Glycos_transf_1 PF00534.15 gi|518653298|ref|YP_008142818.1| - 1e-15 57.5 0.1 3.2e-11 42.9 0.0 2.1 1 1 1 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653298|ref|YP_008142818.1| - 8.5e-06 25.9 0.0 1.5e-05 25.1 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferases group 1 NTP_transferase PF00483.18 gi|518653299|ref|YP_008142819.1| - 3.2e-55 187.1 0.0 4.9e-55 186.5 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|518653299|ref|YP_008142819.1| - 5.8e-11 42.7 0.0 7.5e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.19 gi|518653299|ref|YP_008142819.1| - 7.1e-10 37.9 8.0 1.9e-05 23.9 0.3 4.6 3 2 2 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|518653299|ref|YP_008142819.1| - 0.00015 21.2 7.4 0.00044 19.7 0.0 4.0 5 0 0 5 5 5 1 Hexapeptide repeat of succinyl-transferase RmlD_sub_bind PF04321.12 gi|518653300|ref|YP_008142820.1| - 6.1e-61 205.8 0.0 6.8e-61 205.6 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|518653300|ref|YP_008142820.1| - 1.7e-15 57.0 1.6 4.5e-15 55.7 1.1 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|518653300|ref|YP_008142820.1| - 3.1e-07 29.5 0.1 1.9e-06 26.9 0.0 2.2 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|518653300|ref|YP_008142820.1| - 5.3e-07 28.8 0.1 7.2e-07 28.3 0.1 1.3 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.16 gi|518653301|ref|YP_008142821.1| - 7.6e-55 185.9 0.0 9.2e-55 185.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|518653301|ref|YP_008142821.1| - 1.2e-09 37.5 0.0 2.1e-09 36.7 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|518653301|ref|YP_008142821.1| - 2.4e-09 36.4 0.0 7.4e-07 28.3 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein 3Beta_HSD PF01073.14 gi|518653301|ref|YP_008142821.1| - 9.7e-09 34.3 0.0 1.3e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|518653301|ref|YP_008142821.1| - 3.1e-07 29.5 0.0 5.1e-06 25.6 0.0 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein dTDP_sugar_isom PF00908.12 gi|518653302|ref|YP_008142822.1| - 2.6e-47 160.3 0.1 3e-47 160.2 0.1 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Glycos_transf_1 PF00534.15 gi|518653303|ref|YP_008142823.1| - 7.9e-24 83.9 0.8 4.5e-21 75.0 0.1 2.2 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|518653303|ref|YP_008142823.1| - 3.8e-12 46.5 0.0 6.3e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2079 PF09852.4 gi|518653304|ref|YP_008142824.1| - 2.8e-41 141.6 25.7 5.1e-41 140.8 17.8 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) OppC_N PF12911.2 gi|518653304|ref|YP_008142824.1| - 0.61 9.5 7.9 0.42 10.0 1.5 3.4 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Glycos_transf_2 PF00535.21 gi|518653306|ref|YP_008142826.1| - 1.2e-24 86.8 0.6 1.7e-24 86.3 0.4 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|518653306|ref|YP_008142826.1| - 1.1e-07 31.2 1.2 2e-07 30.3 0.3 1.8 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|518653306|ref|YP_008142826.1| - 2.3e-05 24.3 0.0 3.4e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|518653306|ref|YP_008142826.1| - 0.0019 17.5 0.0 0.003 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Thioredoxin_8 PF13905.1 gi|518653306|ref|YP_008142826.1| - 0.037 14.1 0.1 0.084 13.0 0.1 1.6 1 0 0 1 1 1 0 Thioredoxin-like Pneumo_ncap PF03246.8 gi|518653307|ref|YP_008142827.1| - 0.024 13.1 0.1 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus nucleocapsid protein Glycos_transf_2 PF00535.21 gi|518653309|ref|YP_008142829.1| - 2.6e-12 46.7 4.8 3.8e-12 46.2 3.3 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|518653309|ref|YP_008142829.1| - 0.0054 16.5 0.0 0.0085 15.9 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 DUF4286 PF14114.1 gi|518653309|ref|YP_008142829.1| - 0.021 15.0 0.4 0.031 14.5 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4286) rve PF00665.21 gi|518653310|ref|YP_008142830.1| - 4.5e-19 68.7 0.1 8.1e-19 67.9 0.1 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|518653310|ref|YP_008142830.1| - 4.7e-18 64.4 0.4 1.5e-17 62.8 0.3 1.9 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.1 gi|518653310|ref|YP_008142830.1| - 2e-11 43.7 2.9 4.4e-11 42.6 2.0 1.6 1 0 0 1 1 1 1 HTH-like domain rve_2 PF13333.1 gi|518653310|ref|YP_008142830.1| - 3.4e-07 30.2 1.4 1.2e-06 28.4 0.9 2.0 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.1 gi|518653310|ref|YP_008142830.1| - 0.021 14.8 1.0 0.044 13.7 0.7 1.6 1 0 0 1 1 1 0 DDE domain DUF3685 PF12452.3 gi|518653310|ref|YP_008142830.1| - 0.025 13.7 0.1 0.025 13.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3685) NUMOD1 PF07453.8 gi|518653310|ref|YP_008142830.1| - 0.26 11.1 5.2 3.3 7.6 0.1 3.9 4 0 0 4 4 4 0 NUMOD1 domain HTH_Tnp_1 PF01527.15 gi|518653311|ref|YP_008142831.1| - 1.9e-10 40.5 0.0 2.8e-10 39.9 0.0 1.3 1 1 0 1 1 1 1 Transposase HTH_29 PF13551.1 gi|518653311|ref|YP_008142831.1| - 9.8e-06 25.6 0.0 1.1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.1 gi|518653311|ref|YP_008142831.1| - 1.2e-05 25.1 0.0 2.2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|518653311|ref|YP_008142831.1| - 0.00044 19.8 0.0 0.00066 19.2 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain LZ_Tnp_IS481 PF13011.1 gi|518653311|ref|YP_008142831.1| - 0.059 13.7 0.0 0.068 13.5 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 Phosphoesterase PF04185.9 gi|518653311|ref|YP_008142831.1| - 0.068 12.3 0.0 0.071 12.2 0.0 1.0 1 0 0 1 1 1 0 Phosphoesterase family