#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|284161129|ref|YP_003399752.1|	-	2.4e-25	88.3	0.3	1.1e-24	86.2	0.1	2.2	2	0	0	2	2	2	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|284161129|ref|YP_003399752.1|	-	4.8e-13	49.6	0.0	2.2e-12	47.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284161129|ref|YP_003399752.1|	-	4.6e-12	46.7	0.1	6.3e-11	42.9	0.0	2.5	2	1	0	2	2	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|284161129|ref|YP_003399752.1|	-	1.5e-09	38.4	0.0	3.8e-09	37.1	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|284161129|ref|YP_003399752.1|	-	1.4e-06	27.9	0.1	2.2e-06	27.2	0.1	1.3	1	0	0	1	1	1	1	Bacterial	TniB	protein
NACHT	PF05729.12	gi|284161129|ref|YP_003399752.1|	-	4.4e-06	26.7	0.0	7.6e-06	25.9	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
KAP_NTPase	PF07693.14	gi|284161129|ref|YP_003399752.1|	-	6.6e-06	25.6	0.6	0.0018	17.6	0.0	2.2	1	1	1	2	2	2	1	KAP	family	P-loop	domain
DEAD	PF00270.29	gi|284161129|ref|YP_003399752.1|	-	2.1e-05	24.4	0.4	0.028	14.2	0.1	2.4	1	1	1	2	2	2	2	DEAD/DEAH	box	helicase
ATPase_2	PF01637.18	gi|284161129|ref|YP_003399752.1|	-	2.2e-05	24.5	0.4	4.6e-05	23.4	0.1	1.7	2	0	0	2	2	1	1	ATPase	domain	predominantly	from	Archaea
RuvB_N	PF05496.12	gi|284161129|ref|YP_003399752.1|	-	0.00013	21.8	0.5	0.3	10.8	0.0	2.7	3	0	0	3	3	3	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DUF815	PF05673.13	gi|284161129|ref|YP_003399752.1|	-	0.00024	20.4	0.0	0.00066	18.9	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_assoc_2	PF16193.5	gi|284161129|ref|YP_003399752.1|	-	0.0017	18.6	0.1	0.0043	17.4	0.1	1.6	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA_7	PF12775.7	gi|284161129|ref|YP_003399752.1|	-	0.0023	17.5	0.0	0.0093	15.5	0.0	1.9	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Sigma54_activat	PF00158.26	gi|284161129|ref|YP_003399752.1|	-	0.0027	17.4	0.0	0.012	15.3	0.0	1.9	2	0	0	2	2	2	1	Sigma-54	interaction	domain
ResIII	PF04851.15	gi|284161129|ref|YP_003399752.1|	-	0.0057	16.7	0.0	0.014	15.4	0.0	1.7	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_2	PF07724.14	gi|284161129|ref|YP_003399752.1|	-	0.0088	16.2	0.1	0.048	13.8	0.1	2.1	1	1	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
DUF853	PF05872.12	gi|284161129|ref|YP_003399752.1|	-	0.014	14.1	0.0	0.026	13.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF853)
TsaE	PF02367.17	gi|284161129|ref|YP_003399752.1|	-	0.017	15.1	0.0	0.035	14.1	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_32	PF13654.6	gi|284161129|ref|YP_003399752.1|	-	0.017	13.9	0.7	0.73	8.5	0.3	2.2	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|284161129|ref|YP_003399752.1|	-	0.027	13.7	0.0	0.053	12.7	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
FtsK_SpoIIIE	PF01580.18	gi|284161129|ref|YP_003399752.1|	-	0.035	13.4	0.1	0.44	9.9	0.0	2.2	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_30	PF13604.6	gi|284161129|ref|YP_003399752.1|	-	0.049	13.3	0.1	0.2	11.4	0.0	2.0	2	1	1	3	3	2	0	AAA	domain
DUF87	PF01935.17	gi|284161129|ref|YP_003399752.1|	-	0.052	13.6	0.4	0.32	11.1	0.1	2.3	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
T2SSE	PF00437.20	gi|284161129|ref|YP_003399752.1|	-	0.057	12.5	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Mg_chelatase_C	PF13335.6	gi|284161129|ref|YP_003399752.1|	-	0.074	13.7	0.2	0.17	12.6	0.2	1.6	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI	C-terminal
P22_AR_N	PF10547.9	gi|284161129|ref|YP_003399752.1|	-	0.08	13.3	0.0	0.18	12.1	0.0	1.6	1	0	0	1	1	1	0	P22_AR	N-terminal	domain
AAA_5	PF07728.14	gi|284161129|ref|YP_003399752.1|	-	0.1	12.6	0.9	1.7	8.6	0.9	2.7	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.6	gi|284161129|ref|YP_003399752.1|	-	0.1	12.9	0.4	0.34	11.2	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|284161129|ref|YP_003399752.1|	-	0.11	11.7	0.5	0.56	9.5	0.0	2.2	3	0	0	3	3	3	0	Zeta	toxin
RNA_helicase	PF00910.22	gi|284161129|ref|YP_003399752.1|	-	0.12	12.8	0.0	0.24	11.8	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_24	PF13479.6	gi|284161129|ref|YP_003399752.1|	-	0.12	12.0	1.4	0.39	10.4	1.4	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|284161129|ref|YP_003399752.1|	-	0.14	12.8	0.3	0.54	10.8	0.2	2.1	2	1	0	2	2	2	0	AAA	domain
Microtub_bd	PF16796.5	gi|284161129|ref|YP_003399752.1|	-	0.15	12.0	0.0	0.35	10.8	0.0	1.7	1	0	0	1	1	1	0	Microtubule	binding
ABC_tran	PF00005.27	gi|284161129|ref|YP_003399752.1|	-	0.18	12.3	0.2	0.89	10.1	0.1	2.1	2	1	0	2	2	2	0	ABC	transporter
FAA_hydrolase	PF01557.18	gi|284161130|ref|YP_003399753.1|	-	2.4e-67	226.8	0.0	2.8e-67	226.6	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
tRNA-synt_1	PF00133.22	gi|284161131|ref|YP_003399754.1|	-	2.1e-144	482.1	3.3	3.5e-143	478.0	3.3	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|284161131|ref|YP_003399754.1|	-	1e-42	145.7	0.4	2.5e-42	144.4	0.4	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|284161131|ref|YP_003399754.1|	-	1e-23	83.8	0.5	5.1e-14	51.8	0.0	3.4	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|284161131|ref|YP_003399754.1|	-	1.5e-07	31.0	0.0	0.00042	19.8	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.6	gi|284161131|ref|YP_003399754.1|	-	3.7e-05	23.3	0.0	9.4e-05	22.0	0.0	1.7	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.18	gi|284161131|ref|YP_003399754.1|	-	0.00016	20.8	0.2	0.096	11.6	0.0	2.8	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(K)
DZR	PF12773.7	gi|284161131|ref|YP_003399754.1|	-	0.0042	17.1	1.6	0.96	9.5	0.2	3.3	3	0	0	3	3	3	1	Double	zinc	ribbon
HypA	PF01155.19	gi|284161131|ref|YP_003399754.1|	-	0.012	15.6	0.2	1.4	9.0	0.0	3.2	3	0	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
YhfH	PF14149.6	gi|284161131|ref|YP_003399754.1|	-	0.028	14.4	2.3	1	9.4	0.9	2.6	2	0	0	2	2	2	0	YhfH-like	protein
Zn-ribbon_8	PF09723.10	gi|284161131|ref|YP_003399754.1|	-	0.037	14.2	4.3	0.06	13.5	0.5	2.7	3	0	0	3	3	2	0	Zinc	ribbon	domain
tRNA-synt_1d	PF00750.19	gi|284161131|ref|YP_003399754.1|	-	0.055	12.4	0.0	0.14	11.1	0.0	1.6	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
zinc_ribbon_15	PF17032.5	gi|284161131|ref|YP_003399754.1|	-	0.12	13.1	2.0	15	6.4	0.0	3.3	3	0	0	3	3	3	0	zinc-ribbon	family
NOB1_Zn_bind	PF08772.11	gi|284161131|ref|YP_003399754.1|	-	0.14	12.3	1.8	2.1	8.6	0.6	2.8	2	1	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-TFIIB	PF13453.6	gi|284161131|ref|YP_003399754.1|	-	0.15	11.5	2.6	62	3.1	0.1	3.6	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
Lar_restr_allev	PF14354.6	gi|284161131|ref|YP_003399754.1|	-	0.25	11.7	2.4	7.7	7.0	0.2	3.2	3	0	0	3	3	3	0	Restriction	alleviation	protein	Lar
zf-RRN7	PF11781.8	gi|284161131|ref|YP_003399754.1|	-	3.4	7.4	7.6	3.2	7.5	0.2	3.0	3	0	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
TF_Zn_Ribbon	PF08271.12	gi|284161131|ref|YP_003399754.1|	-	3.8	7.1	5.3	21	4.7	0.4	3.5	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-ACC	PF17848.1	gi|284161131|ref|YP_003399754.1|	-	8.5	6.6	12.5	12	6.1	0.0	4.3	4	0	0	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-ribbon_3	PF13248.6	gi|284161131|ref|YP_003399754.1|	-	9.1	5.9	12.7	9.8	5.7	1.1	4.3	4	0	0	4	4	4	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|284161131|ref|YP_003399754.1|	-	9.6	6.1	13.2	22	4.9	0.1	3.7	4	0	0	4	4	4	0	zinc-ribbon	domain
RMMBL	PF07521.12	gi|284161132|ref|YP_003399755.1|	-	1.8e-16	59.8	0.6	4.2e-15	55.4	0.0	2.4	2	0	0	2	2	2	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Beta-Casp	PF10996.8	gi|284161132|ref|YP_003399755.1|	-	1.5e-12	47.8	0.0	3.7e-12	46.5	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.27	gi|284161132|ref|YP_003399755.1|	-	1.9e-07	31.3	0.2	7.5e-07	29.3	0.2	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|284161132|ref|YP_003399755.1|	-	4.1e-06	26.5	0.0	7.3e-06	25.6	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PYC_OADA	PF02436.18	gi|284161133|ref|YP_003399756.1|	-	1.3e-58	198.0	0.4	7.4e-58	195.6	0.3	1.9	2	0	0	2	2	2	1	Conserved	carboxylase	domain
HMGL-like	PF00682.19	gi|284161133|ref|YP_003399756.1|	-	2e-43	148.8	0.0	2.6e-43	148.5	0.0	1.1	1	0	0	1	1	1	1	HMGL-like
Metallophos_2	PF12850.7	gi|284161134|ref|YP_003399757.1|	-	2.1e-27	96.3	0.0	2.5e-27	96.1	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|284161134|ref|YP_003399757.1|	-	1.8e-09	38.4	0.2	7.2e-07	29.9	0.2	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
ALMS_repeat	PF18727.1	gi|284161134|ref|YP_003399757.1|	-	0.094	12.6	0.1	0.27	11.2	0.0	1.7	2	0	0	2	2	2	0	Alstrom	syndrome	repeat
PhoH	PF02562.16	gi|284161135|ref|YP_003399758.1|	-	1.9e-46	158.2	0.0	2.4e-46	157.8	0.0	1.1	1	0	0	1	1	1	1	PhoH-like	protein
KH_2	PF07650.17	gi|284161135|ref|YP_003399758.1|	-	2.2e-08	33.8	6.2	8.6e-08	31.9	1.0	2.9	2	1	1	3	3	3	1	KH	domain
KH_5	PF13184.6	gi|284161135|ref|YP_003399758.1|	-	3.6e-08	33.4	1.0	4.1e-06	26.8	0.1	3.0	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.29	gi|284161135|ref|YP_003399758.1|	-	0.00023	20.9	2.0	0.00046	20.0	0.8	2.2	2	0	0	2	2	2	1	KH	domain
IstB_IS21	PF01695.17	gi|284161135|ref|YP_003399758.1|	-	0.0029	17.4	0.0	0.005	16.6	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ResIII	PF04851.15	gi|284161135|ref|YP_003399758.1|	-	0.0047	16.9	0.0	0.007	16.4	0.0	1.2	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
ATPase	PF06745.13	gi|284161135|ref|YP_003399758.1|	-	0.013	14.8	0.0	0.038	13.3	0.0	1.7	1	0	0	1	1	1	0	KaiC
Sigma54_activat	PF00158.26	gi|284161135|ref|YP_003399758.1|	-	0.046	13.4	0.0	8.2	6.1	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
KH_4	PF13083.6	gi|284161135|ref|YP_003399758.1|	-	0.052	13.4	0.1	0.13	12.1	0.1	1.7	1	0	0	1	1	1	0	KH	domain
AAA_30	PF13604.6	gi|284161135|ref|YP_003399758.1|	-	0.058	13.1	0.0	0.3	10.8	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|284161135|ref|YP_003399758.1|	-	0.1	12.9	0.8	1.7	8.9	0.8	2.2	1	1	0	1	1	1	0	AAA	domain
DUF4258	PF14076.6	gi|284161135|ref|YP_003399758.1|	-	0.14	12.5	0.4	5.5	7.5	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4258)
DEAD	PF00270.29	gi|284161135|ref|YP_003399758.1|	-	0.18	11.6	0.0	0.3	10.8	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
DED	PF01335.21	gi|284161136|ref|YP_003399759.1|	-	0.00059	20.1	0.4	0.0012	19.1	0.4	1.5	1	0	0	1	1	1	1	Death	effector	domain
DUF836	PF05768.14	gi|284161137|ref|YP_003399760.1|	-	0.27	11.7	3.2	1.2	9.6	0.0	2.6	2	1	1	3	3	3	0	Glutaredoxin-like	domain	(DUF836)
NRDD	PF13597.6	gi|284161138|ref|YP_003399761.1|	-	1.7e-165	552.1	0.0	2.1e-165	551.8	0.0	1.1	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
ATP-cone	PF03477.16	gi|284161138|ref|YP_003399761.1|	-	3.8e-05	24.2	1.5	0.0001	22.8	0.5	2.2	2	0	0	2	2	2	1	ATP	cone	domain
CM_2	PF01817.21	gi|284161138|ref|YP_003399761.1|	-	0.031	14.6	5.4	0.036	14.4	0.1	3.0	3	0	0	3	3	3	0	Chorismate	mutase	type	II
zf-ribbon_3	PF13248.6	gi|284161138|ref|YP_003399761.1|	-	0.11	12.0	1.6	3.3	7.2	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
ACD	PF16671.5	gi|284161138|ref|YP_003399761.1|	-	0.16	10.3	0.0	0.25	9.6	0.0	1.2	1	0	0	1	1	1	0	Actin	cross-linking	domain
TackOD1	PF18551.1	gi|284161138|ref|YP_003399761.1|	-	0.19	11.4	0.0	0.36	10.5	0.0	1.4	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
Isochorismatase	PF00857.20	gi|284161139|ref|YP_003399762.1|	-	1.9e-49	168.2	0.1	2.1e-49	168.0	0.1	1.0	1	0	0	1	1	1	1	Isochorismatase	family
DUF2061	PF09834.9	gi|284161140|ref|YP_003399763.1|	-	0.026	15.0	2.2	0.051	14.1	2.2	1.6	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2061)
Phage_holin_2_1	PF04971.12	gi|284161140|ref|YP_003399763.1|	-	0.13	12.3	2.9	0.12	12.4	1.1	1.9	1	1	1	2	2	2	0	Bacteriophage	P21	holin	S
Halogen_Hydrol	PF10112.9	gi|284161140|ref|YP_003399763.1|	-	0.15	12.1	1.3	0.16	12.0	1.3	1.0	1	0	0	1	1	1	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
DUF919	PF06034.11	gi|284161141|ref|YP_003399764.1|	-	0.091	12.6	0.7	0.13	12.1	0.7	1.2	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
AsnC_trans_reg2	PF17805.1	gi|284161142|ref|YP_003399765.1|	-	2.1e-35	120.7	0.1	4.9e-17	61.9	0.0	2.3	2	0	0	2	2	2	2	AsnC-like	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|284161142|ref|YP_003399765.1|	-	0.014	15.2	0.0	0.039	13.8	0.0	1.8	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
SASP	PF00269.20	gi|284161142|ref|YP_003399765.1|	-	0.43	10.6	1.2	0.51	10.4	0.0	1.7	2	0	0	2	2	2	0	Small,	acid-soluble	spore	proteins,	alpha/beta	type
NAD_binding_7	PF13241.6	gi|284161143|ref|YP_003399766.1|	-	4.9e-21	75.1	0.2	1.2e-20	73.8	0.1	1.7	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.18	gi|284161143|ref|YP_003399766.1|	-	2.7e-06	27.6	0.1	6e-06	26.5	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
3Beta_HSD	PF01073.19	gi|284161143|ref|YP_003399766.1|	-	3.5e-06	26.2	0.1	7.7e-06	25.1	0.1	1.5	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.6	gi|284161143|ref|YP_003399766.1|	-	4.2e-06	26.8	0.6	7.2e-06	26.0	0.1	1.6	2	0	0	2	2	2	1	NAD(P)H-binding
Sacchrp_dh_NADP	PF03435.18	gi|284161143|ref|YP_003399766.1|	-	1.2e-05	25.5	0.1	2.8e-05	24.4	0.1	1.6	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
F420_oxidored	PF03807.17	gi|284161143|ref|YP_003399766.1|	-	1.6e-05	25.4	0.6	5.1e-05	23.8	0.1	2.1	3	0	0	3	3	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NmrA	PF05368.13	gi|284161143|ref|YP_003399766.1|	-	2.2e-05	24.1	0.1	3.7e-05	23.4	0.1	1.4	1	0	0	1	1	1	1	NmrA-like	family
adh_short	PF00106.25	gi|284161143|ref|YP_003399766.1|	-	8.7e-05	22.1	0.0	0.00019	21.0	0.0	1.5	1	0	0	1	1	1	1	short	chain	dehydrogenase
PrkA	PF06798.12	gi|284161143|ref|YP_003399766.1|	-	9.6e-05	22.1	0.1	0.00016	21.4	0.1	1.5	1	0	0	1	1	1	1	PrkA	serine	protein	kinase	C-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|284161143|ref|YP_003399766.1|	-	0.00067	19.1	0.1	0.0014	18.0	0.1	1.5	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|284161143|ref|YP_003399766.1|	-	0.00069	19.0	0.1	0.0013	18.0	0.1	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
DpaA_N	PF16924.5	gi|284161143|ref|YP_003399766.1|	-	0.002	18.2	0.3	0.0084	16.2	0.2	2.0	2	1	0	2	2	2	1	Dipicolinate	synthase	subunit	A	N-terminal	domain
Rossmann-like	PF10727.9	gi|284161143|ref|YP_003399766.1|	-	0.0027	17.6	0.0	0.13	12.1	0.0	2.3	2	1	0	2	2	2	1	Rossmann-like	domain
adh_short_C2	PF13561.6	gi|284161143|ref|YP_003399766.1|	-	0.0033	17.0	0.1	0.0092	15.6	0.0	1.7	2	1	0	2	2	2	1	Enoyl-(Acyl	carrier	protein)	reductase
Shikimate_DH	PF01488.20	gi|284161143|ref|YP_003399766.1|	-	0.0041	17.2	0.2	0.014	15.4	0.1	1.8	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GDP_Man_Dehyd	PF16363.5	gi|284161143|ref|YP_003399766.1|	-	0.011	15.1	0.0	0.019	14.4	0.0	1.3	1	0	0	1	1	1	0	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|284161143|ref|YP_003399766.1|	-	0.013	15.0	0.0	0.02	14.4	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
DUF1374	PF07118.11	gi|284161143|ref|YP_003399766.1|	-	0.019	15.5	3.3	0.021	15.4	0.2	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1374)
AhpC-TSA	PF00578.21	gi|284161143|ref|YP_003399766.1|	-	0.044	13.7	0.2	0.13	12.2	0.1	1.8	2	0	0	2	2	2	0	AhpC/TSA	family
ApbA	PF02558.16	gi|284161143|ref|YP_003399766.1|	-	0.06	13.0	0.0	0.2	11.3	0.0	1.9	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.23	gi|284161143|ref|YP_003399766.1|	-	0.084	12.9	0.1	0.21	11.6	0.1	1.6	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DUF1987	PF09345.10	gi|284161143|ref|YP_003399766.1|	-	0.092	12.4	0.1	3	7.6	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1987)
Pyr_redox_3	PF13738.6	gi|284161143|ref|YP_003399766.1|	-	0.095	11.9	0.1	0.23	10.7	0.0	1.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161143|ref|YP_003399766.1|	-	0.17	12.5	1.6	0.61	10.7	0.7	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
ThiF	PF00899.21	gi|284161143|ref|YP_003399766.1|	-	0.42	9.9	2.5	5.3	6.3	0.9	2.1	1	1	1	2	2	2	0	ThiF	family
DAO	PF01266.24	gi|284161143|ref|YP_003399766.1|	-	0.86	9.1	2.8	22	4.5	2.8	2.6	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
Thioredoxin	PF00085.20	gi|284161144|ref|YP_003399767.1|	-	3.2e-32	110.6	0.1	4.3e-32	110.2	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|284161144|ref|YP_003399767.1|	-	1.5e-09	38.3	0.1	3.5e-08	33.9	0.1	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
OST3_OST6	PF04756.13	gi|284161144|ref|YP_003399767.1|	-	7.9e-07	28.7	0.0	8.7e-07	28.6	0.0	1.1	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Thioredoxin_8	PF13905.6	gi|284161144|ref|YP_003399767.1|	-	1e-06	29.0	0.0	0.00066	20.0	0.0	2.4	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_9	PF14595.6	gi|284161144|ref|YP_003399767.1|	-	7.3e-06	25.8	0.0	8.6e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.11	gi|284161144|ref|YP_003399767.1|	-	3.5e-05	23.7	0.0	6.4e-05	22.9	0.0	1.4	2	0	0	2	2	2	1	Hydrogenase-1	expression	protein	HyaE
AhpC-TSA	PF00578.21	gi|284161144|ref|YP_003399767.1|	-	4.8e-05	23.3	0.1	0.0046	16.9	0.0	2.3	1	1	1	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|284161144|ref|YP_003399767.1|	-	8.2e-05	22.4	0.0	0.00015	21.5	0.0	1.6	1	1	0	1	1	1	1	Redoxin
Thioredoxin_6	PF13848.6	gi|284161144|ref|YP_003399767.1|	-	8.3e-05	22.6	0.2	0.0004	20.3	0.0	1.9	1	1	1	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_7	PF13899.6	gi|284161144|ref|YP_003399767.1|	-	0.0059	16.8	0.0	0.012	15.7	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin-like
TraF	PF13728.6	gi|284161144|ref|YP_003399767.1|	-	0.015	15.1	0.0	0.041	13.7	0.0	1.6	1	1	0	1	1	1	0	F	plasmid	transfer	operon	protein
Thioredoxin_5	PF13743.6	gi|284161144|ref|YP_003399767.1|	-	0.018	14.7	0.0	0.076	12.7	0.0	1.9	1	1	1	2	2	2	0	Thioredoxin
Thioredoxin_3	PF13192.6	gi|284161144|ref|YP_003399767.1|	-	0.044	13.8	0.0	0.077	13.0	0.0	1.5	1	1	0	1	1	1	0	Thioredoxin	domain
CM2	PF03021.14	gi|284161144|ref|YP_003399767.1|	-	0.096	12.5	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	Influenza	C	virus	M2	protein
RNase_HII	PF01351.18	gi|284161145|ref|YP_003399768.1|	-	5e-55	186.4	0.0	5.7e-55	186.2	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
M11L	PF11099.8	gi|284161145|ref|YP_003399768.1|	-	0.01	16.2	1.7	0.017	15.4	1.7	1.3	1	0	0	1	1	1	1	Apoptosis	regulator	M11L	like
Ish1	PF10281.9	gi|284161145|ref|YP_003399768.1|	-	0.013	15.8	0.1	0.4	11.0	0.2	2.5	2	0	0	2	2	2	0	Putative	stress-responsive	nuclear	envelope	protein
Sigma54_activ_2	PF14532.6	gi|284161145|ref|YP_003399768.1|	-	0.046	13.8	0.1	0.074	13.2	0.1	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Aminotran_5	PF00266.19	gi|284161145|ref|YP_003399768.1|	-	0.2	10.6	0.0	0.34	9.8	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class-V
QRPTase_C	PF01729.19	gi|284161146|ref|YP_003399769.1|	-	6.4e-39	133.4	0.0	8.7e-39	133.0	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
NAPRTase_N	PF17767.1	gi|284161146|ref|YP_003399769.1|	-	0.018	15.4	0.0	0.059	13.8	0.0	1.9	1	0	0	1	1	1	0	Nicotinate	phosphoribosyltransferase	(NAPRTase)	N-terminal	domain
NAPRTase_C	PF17956.1	gi|284161146|ref|YP_003399769.1|	-	0.024	15.0	0.0	0.058	13.8	0.0	1.6	1	0	0	1	1	1	0	Nicotinate	phosphoribosyltransferase	C-terminal	domain
QRPTase_N	PF02749.16	gi|284161146|ref|YP_003399769.1|	-	0.099	12.7	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
NAPRTase	PF04095.16	gi|284161146|ref|YP_003399769.1|	-	0.16	11.6	0.0	0.49	10.0	0.0	1.9	1	1	0	1	1	1	0	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
MazG	PF03819.17	gi|284161147|ref|YP_003399770.1|	-	1.3e-15	57.3	0.1	2.1e-15	56.6	0.1	1.3	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.17	gi|284161147|ref|YP_003399770.1|	-	3.4e-05	24.2	0.3	4.2e-05	23.9	0.3	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.7	gi|284161147|ref|YP_003399770.1|	-	4.5e-05	23.6	0.4	6.6e-05	23.1	0.3	1.3	1	1	0	1	1	1	1	MazG-like	family
dUTPase_2	PF08761.11	gi|284161147|ref|YP_003399770.1|	-	0.056	13.6	0.2	0.077	13.2	0.2	1.3	1	1	0	1	1	1	0	dUTPase
His_biosynth	PF00977.21	gi|284161148|ref|YP_003399771.1|	-	4.5e-91	304.4	0.2	5.2e-91	304.2	0.2	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.17	gi|284161148|ref|YP_003399771.1|	-	1.3e-06	27.8	0.0	0.00013	21.2	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|284161148|ref|YP_003399771.1|	-	1.4e-06	28.0	0.2	0.01	15.2	0.0	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
ThiG	PF05690.14	gi|284161148|ref|YP_003399771.1|	-	5.6e-06	25.8	0.6	0.069	12.4	0.1	2.2	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.17	gi|284161148|ref|YP_003399771.1|	-	9.4e-05	21.8	0.1	0.31	10.4	0.0	2.4	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase
G3P_antiterm	PF04309.12	gi|284161148|ref|YP_003399771.1|	-	0.00021	20.8	0.3	0.0038	16.7	0.1	2.1	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.21	gi|284161148|ref|YP_003399771.1|	-	0.02	14.1	0.1	0.4	9.9	0.0	2.0	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
IMPDH	PF00478.25	gi|284161148|ref|YP_003399771.1|	-	0.035	13.1	0.2	0.82	8.6	0.0	2.1	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
HTH_27	PF13463.6	gi|284161149|ref|YP_003399772.1|	-	0.00024	21.5	0.0	0.0013	19.2	0.1	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DUF4364	PF14277.6	gi|284161149|ref|YP_003399772.1|	-	0.0019	17.9	0.0	0.53	10.0	0.0	2.5	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF4364)
HTH_20	PF12840.7	gi|284161149|ref|YP_003399772.1|	-	0.0056	16.7	0.0	0.011	15.8	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
RNase_P_p30	PF01876.16	gi|284161150|ref|YP_003399773.1|	-	6.7e-16	58.4	0.0	8.5e-16	58.1	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
DUF2635	PF10948.8	gi|284161150|ref|YP_003399773.1|	-	0.03	14.0	0.3	0.054	13.2	0.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2635)
RNA_binding	PF01877.17	gi|284161151|ref|YP_003399774.1|	-	1.4e-38	131.8	0.3	1.8e-38	131.5	0.3	1.1	1	0	0	1	1	1	1	RNA	binding
DUF2795	PF11387.8	gi|284161151|ref|YP_003399774.1|	-	0.021	15.0	0.0	0.042	14.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2795)
FBPase_3	PF01950.16	gi|284161151|ref|YP_003399774.1|	-	0.04	13.1	0.1	0.046	12.9	0.1	1.1	1	0	0	1	1	1	0	Fructose-1,6-bisphosphatase
Form_Nir_trans	PF01226.17	gi|284161152|ref|YP_003399775.1|	-	0.052	12.9	8.3	0.44	9.8	1.1	2.1	1	1	1	2	2	2	0	Formate/nitrite	transporter
PHO4	PF01384.20	gi|284161152|ref|YP_003399775.1|	-	0.3	10.1	6.2	0.36	9.8	6.2	1.1	1	0	0	1	1	1	0	Phosphate	transporter	family
Peptidase_M50	PF02163.22	gi|284161152|ref|YP_003399775.1|	-	0.32	10.2	2.7	10	5.3	0.5	2.2	2	0	0	2	2	2	0	Peptidase	family	M50
MazG	PF03819.17	gi|284161153|ref|YP_003399776.1|	-	7.6e-14	51.6	0.2	7.6e-14	51.6	0.2	1.7	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.17	gi|284161153|ref|YP_003399776.1|	-	3.6e-06	27.3	1.0	4.8e-06	26.9	1.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.7	gi|284161153|ref|YP_003399776.1|	-	0.00011	22.3	1.6	0.00013	22.1	0.3	1.7	1	1	1	2	2	2	1	MazG-like	family
dUTPase_2	PF08761.11	gi|284161153|ref|YP_003399776.1|	-	0.021	15.0	0.3	0.032	14.4	0.3	1.3	1	1	0	1	1	1	0	dUTPase
TrkA_N	PF02254.18	gi|284161154|ref|YP_003399777.1|	-	6.6e-28	97.3	2.3	1.4e-27	96.2	1.5	2.0	2	0	0	2	2	2	1	TrkA-N	domain
DHH	PF01368.20	gi|284161154|ref|YP_003399777.1|	-	7.3e-15	55.1	0.8	3.7e-14	52.8	0.4	2.3	2	1	0	2	2	2	1	DHH	family
DHHA1	PF02272.19	gi|284161154|ref|YP_003399777.1|	-	1.4e-12	48.2	1.0	3.7e-12	46.8	0.1	2.1	2	0	0	2	2	2	1	DHHA1	domain
NAD_binding_2	PF03446.15	gi|284161154|ref|YP_003399777.1|	-	9.4e-06	25.9	0.2	1.8e-05	25.0	0.2	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_7	PF13241.6	gi|284161154|ref|YP_003399777.1|	-	0.00023	21.6	2.3	0.00066	20.1	1.3	2.3	1	1	1	2	2	2	1	Putative	NAD(P)-binding
Methyltransf_11	PF08241.12	gi|284161154|ref|YP_003399777.1|	-	0.0013	19.3	0.1	0.0061	17.2	0.1	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
F420_oxidored	PF03807.17	gi|284161154|ref|YP_003399777.1|	-	0.0054	17.3	0.5	0.031	14.8	0.5	2.3	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
PrpR_N	PF06506.11	gi|284161154|ref|YP_003399777.1|	-	0.0087	15.6	0.2	0.056	13.0	0.1	2.3	2	0	0	2	2	2	1	Propionate	catabolism	activator
Methyltransf_25	PF13649.6	gi|284161154|ref|YP_003399777.1|	-	0.0096	16.6	0.0	0.03	15.0	0.0	1.9	1	0	0	1	1	1	1	Methyltransferase	domain
Sacchrp_dh_NADP	PF03435.18	gi|284161154|ref|YP_003399777.1|	-	0.012	15.8	1.9	0.17	12.1	1.4	2.9	2	1	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
Pyr_redox_2	PF07992.14	gi|284161154|ref|YP_003399777.1|	-	0.026	13.8	0.0	0.041	13.1	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.14	gi|284161154|ref|YP_003399777.1|	-	0.033	13.8	0.3	0.07	12.7	0.3	1.6	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|284161154|ref|YP_003399777.1|	-	0.033	13.5	2.5	0.16	11.2	0.2	2.4	1	1	1	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
adh_short	PF00106.25	gi|284161154|ref|YP_003399777.1|	-	0.035	13.6	0.2	0.15	11.5	0.1	2.1	2	1	1	3	3	3	0	short	chain	dehydrogenase
Shikimate_DH	PF01488.20	gi|284161154|ref|YP_003399777.1|	-	0.057	13.5	0.6	0.26	11.3	0.2	2.3	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.18	gi|284161154|ref|YP_003399777.1|	-	0.11	12.4	1.5	0.3	11.0	0.2	2.4	2	1	1	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|284161154|ref|YP_003399777.1|	-	0.14	11.5	0.2	0.36	10.2	0.1	1.8	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|284161154|ref|YP_003399777.1|	-	0.14	11.8	0.0	0.25	11.0	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ThiS	PF02597.20	gi|284161156|ref|YP_003399779.1|	-	2.9e-05	24.6	0.3	3.2e-05	24.5	0.3	1.1	1	0	0	1	1	1	1	ThiS	family
PhdYeFM_antitox	PF02604.19	gi|284161156|ref|YP_003399779.1|	-	0.062	13.1	0.1	0.13	12.1	0.0	1.6	1	1	1	2	2	2	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
Thioredoxin_14	PF18402.1	gi|284161156|ref|YP_003399779.1|	-	0.16	11.9	0.0	0.16	11.9	0.0	1.0	1	0	0	1	1	1	0	Thioredoxin-like	domain
PKD	PF00801.20	gi|284161157|ref|YP_003399780.1|	-	2.3e-17	62.6	5.6	1.1e-16	60.4	5.6	2.3	1	0	0	1	1	1	1	PKD	domain
Big_1	PF02369.16	gi|284161157|ref|YP_003399780.1|	-	1.3e-14	53.9	19.8	2e-11	43.7	0.5	4.8	4	1	0	4	4	4	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|284161157|ref|YP_003399780.1|	-	9.6e-08	32.2	11.1	0.00018	21.7	0.4	4.2	4	0	0	4	4	4	2	Invasin,	domain	3
DUF499	PF04465.12	gi|284161157|ref|YP_003399780.1|	-	0.0054	14.5	0.1	0.012	13.4	0.0	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF499)
Big_3_5	PF16640.5	gi|284161157|ref|YP_003399780.1|	-	0.016	15.4	15.3	0.16	12.2	0.2	4.2	3	1	1	4	4	4	0	Bacterial	Ig-like	domain	(group	3)
CarbopepD_reg_2	PF13715.6	gi|284161157|ref|YP_003399780.1|	-	0.061	13.3	2.7	0.63	10.1	0.2	3.3	3	0	0	3	3	3	0	CarboxypepD_reg-like	domain
eRF1_1	PF03463.15	gi|284161158|ref|YP_003399781.1|	-	1.7e-28	99.2	1.1	2.8e-28	98.5	1.1	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.15	gi|284161158|ref|YP_003399781.1|	-	5.7e-23	81.6	3.2	6e-23	81.5	0.3	2.3	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.15	gi|284161158|ref|YP_003399781.1|	-	1.3e-05	25.6	0.1	0.00011	22.5	0.1	2.3	1	1	0	1	1	1	1	eRF1	domain	2
Radical_SAM	PF04055.21	gi|284161158|ref|YP_003399781.1|	-	0.011	16.1	2.2	0.085	13.2	0.2	2.2	2	0	0	2	2	2	0	Radical	SAM	superfamily
DUF1133	PF06576.11	gi|284161158|ref|YP_003399781.1|	-	0.041	13.3	0.0	0.27	10.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1133)
Ribosomal_L10	PF00466.20	gi|284161158|ref|YP_003399781.1|	-	0.085	13.0	0.1	0.21	11.8	0.1	1.7	1	1	0	1	1	1	0	Ribosomal	protein	L10
Peroxin-22	PF12827.7	gi|284161158|ref|YP_003399781.1|	-	0.13	12.2	0.0	0.24	11.3	0.0	1.5	1	0	0	1	1	1	0	Peroxisomal	biogenesis	protein	family
PCMT	PF01135.19	gi|284161159|ref|YP_003399782.1|	-	6.8e-81	271.0	0.0	8e-81	270.8	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|284161159|ref|YP_003399782.1|	-	4e-12	46.2	0.0	5.4e-12	45.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|284161159|ref|YP_003399782.1|	-	4.9e-07	29.3	0.0	6.8e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|284161159|ref|YP_003399782.1|	-	8.5e-07	29.6	0.0	1.4e-06	28.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|284161159|ref|YP_003399782.1|	-	2.9e-06	27.1	0.0	4.8e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
RrnaAD	PF00398.20	gi|284161159|ref|YP_003399782.1|	-	5.6e-06	25.6	0.0	2e-05	23.8	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_3	PF01596.17	gi|284161159|ref|YP_003399782.1|	-	1.6e-05	24.2	0.0	2.6e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	O-methyltransferase
Fibrillarin	PF01269.17	gi|284161159|ref|YP_003399782.1|	-	1.9e-05	23.9	0.0	2.5e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_11	PF08241.12	gi|284161159|ref|YP_003399782.1|	-	0.00053	20.6	0.0	0.0017	19.0	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|284161159|ref|YP_003399782.1|	-	0.0053	16.6	0.0	0.011	15.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
GCD14	PF08704.10	gi|284161159|ref|YP_003399782.1|	-	0.006	16.3	0.0	0.0077	15.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_32	PF13679.6	gi|284161159|ref|YP_003399782.1|	-	0.0066	16.4	0.0	0.0097	15.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|284161159|ref|YP_003399782.1|	-	0.012	14.9	0.0	0.018	14.4	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
DUF938	PF06080.12	gi|284161159|ref|YP_003399782.1|	-	0.03	14.1	0.0	0.041	13.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
Methyltransf_4	PF02390.17	gi|284161159|ref|YP_003399782.1|	-	0.049	13.1	0.0	0.082	12.4	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_9	PF08003.11	gi|284161159|ref|YP_003399782.1|	-	0.1	11.5	0.0	0.13	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Met_10	PF02475.16	gi|284161159|ref|YP_003399782.1|	-	0.11	12.3	0.0	0.19	11.5	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
GHMP_kinases_N	PF00288.26	gi|284161160|ref|YP_003399783.1|	-	8.6e-12	45.1	2.5	1.2e-11	44.6	1.5	1.8	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
VKOR	PF07884.14	gi|284161161|ref|YP_003399784.1|	-	0.00026	21.2	5.0	0.00026	21.2	5.0	2.0	1	1	1	2	2	2	1	Vitamin	K	epoxide	reductase	family
7tm_4	PF13853.6	gi|284161161|ref|YP_003399784.1|	-	0.028	14.1	1.4	0.028	14.1	1.0	1.3	1	1	0	1	1	1	0	Olfactory	receptor
PGF-CTERM	PF18204.1	gi|284161161|ref|YP_003399784.1|	-	0.2	11.7	0.3	0.2	11.7	0.3	2.8	3	0	0	3	3	3	0	PGF-CTERM	motif
CrgA	PF06781.12	gi|284161161|ref|YP_003399784.1|	-	0.2	11.7	1.9	0.33	11.1	0.1	1.9	2	0	0	2	2	2	0	Cell	division	protein	CrgA
PrgI	PF12666.7	gi|284161161|ref|YP_003399784.1|	-	5.3	7.8	7.3	19	6.0	1.0	2.2	1	1	1	2	2	2	0	PrgI	family	protein
Thioredoxin	PF00085.20	gi|284161162|ref|YP_003399785.1|	-	2.3e-08	33.9	0.2	2.9e-08	33.6	0.2	1.1	1	0	0	1	1	1	1	Thioredoxin
Glutaredoxin	PF00462.24	gi|284161162|ref|YP_003399785.1|	-	3.6e-05	23.9	1.3	5.7e-05	23.2	1.3	1.4	1	0	0	1	1	1	1	Glutaredoxin
Redoxin	PF08534.10	gi|284161162|ref|YP_003399785.1|	-	0.0001	22.0	0.3	0.00012	21.8	0.3	1.2	1	0	0	1	1	1	1	Redoxin
DSBA	PF01323.20	gi|284161162|ref|YP_003399785.1|	-	0.00045	20.1	3.9	0.0054	16.5	0.8	2.1	1	1	1	2	2	2	1	DSBA-like	thioredoxin	domain
DUF953	PF06110.11	gi|284161162|ref|YP_003399785.1|	-	0.00078	19.0	0.0	0.001	18.7	0.0	1.3	1	0	0	1	1	1	1	Eukaryotic	protein	of	unknown	function	(DUF953)
Thioredoxin_4	PF13462.6	gi|284161162|ref|YP_003399785.1|	-	0.00093	19.4	3.0	0.0013	18.9	2.9	1.3	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_3	PF13192.6	gi|284161162|ref|YP_003399785.1|	-	0.0017	18.4	1.0	0.0026	17.8	1.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|284161162|ref|YP_003399785.1|	-	0.0018	18.7	2.5	0.0056	17.1	2.5	1.7	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.6	gi|284161162|ref|YP_003399785.1|	-	0.0058	16.9	1.1	0.013	15.8	0.3	1.8	1	1	1	2	2	2	1	Thioredoxin-like
TraF	PF13728.6	gi|284161162|ref|YP_003399785.1|	-	0.057	13.2	0.1	0.068	13.0	0.1	1.1	1	0	0	1	1	1	0	F	plasmid	transfer	operon	protein
Lactamase_B_3	PF13483.6	gi|284161163|ref|YP_003399786.1|	-	2.9e-30	105.3	0.1	3.6e-30	105.0	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|284161163|ref|YP_003399786.1|	-	7.8e-22	77.8	0.0	2.1e-21	76.4	0.0	1.6	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284161163|ref|YP_003399786.1|	-	9.6e-15	55.1	0.9	1.7e-14	54.3	0.9	1.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
CPSase_L_D2	PF02786.17	gi|284161164|ref|YP_003399787.1|	-	2e-73	246.4	0.0	2.9e-73	245.9	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_N	PF00289.22	gi|284161164|ref|YP_003399787.1|	-	5.4e-48	162.1	0.1	1.1e-47	161.1	0.1	1.5	1	0	0	1	1	1	1	Biotin	carboxylase,	N-terminal	domain
Biotin_carb_C	PF02785.19	gi|284161164|ref|YP_003399787.1|	-	3e-38	130.2	0.0	6.1e-38	129.2	0.0	1.5	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
Dala_Dala_lig_C	PF07478.13	gi|284161164|ref|YP_003399787.1|	-	2.6e-13	50.0	0.0	6.3e-13	48.7	0.0	1.6	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.22	gi|284161164|ref|YP_003399787.1|	-	1.6e-06	27.8	0.0	3.3e-06	26.8	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|284161164|ref|YP_003399787.1|	-	4.9e-05	23.2	0.0	9.9e-05	22.2	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|284161164|ref|YP_003399787.1|	-	0.00097	18.7	0.0	0.0018	17.8	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.14	gi|284161164|ref|YP_003399787.1|	-	0.002	18.2	0.0	0.0053	16.8	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|284161164|ref|YP_003399787.1|	-	0.0031	17.1	0.0	1.8	8.1	0.0	2.2	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|284161164|ref|YP_003399787.1|	-	0.031	14.0	0.0	0.11	12.2	0.0	1.9	2	0	0	2	2	2	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Oxidored_nitro	PF00148.19	gi|284161164|ref|YP_003399787.1|	-	0.08	11.7	0.0	0.12	11.1	0.0	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
GHMP_kinases_C	PF08544.13	gi|284161164|ref|YP_003399787.1|	-	0.13	12.7	0.1	5.2	7.5	0.1	2.5	2	0	0	2	2	2	0	GHMP	kinases	C	terminal
SMC_ScpB	PF04079.16	gi|284161165|ref|YP_003399788.1|	-	2.1e-36	125.0	0.8	2.5e-36	124.7	0.8	1.1	1	0	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
TrmB	PF01978.19	gi|284161165|ref|YP_003399788.1|	-	0.00027	20.8	0.4	0.0097	15.8	0.1	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|284161165|ref|YP_003399788.1|	-	0.013	16.0	0.6	0.068	13.7	0.2	2.2	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|284161165|ref|YP_003399788.1|	-	0.015	15.2	0.4	6.4	6.8	0.0	2.9	3	0	0	3	3	3	0	MarR	family
HTH_15	PF12324.8	gi|284161165|ref|YP_003399788.1|	-	0.017	15.0	0.2	1.3	9.0	0.0	2.7	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	alkylmercury	lyase
HTH_20	PF12840.7	gi|284161165|ref|YP_003399788.1|	-	0.035	14.1	0.1	0.19	11.8	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2250	PF10007.9	gi|284161165|ref|YP_003399788.1|	-	0.064	13.4	0.6	0.25	11.5	0.1	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_24	PF13412.6	gi|284161165|ref|YP_003399788.1|	-	0.12	12.0	2.5	0.66	9.6	0.9	2.8	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DrrA_P4M	PF14860.6	gi|284161165|ref|YP_003399788.1|	-	0.13	12.2	0.4	0.71	9.7	0.0	2.1	2	1	0	2	2	2	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
DUF4423	PF14394.6	gi|284161165|ref|YP_003399788.1|	-	0.15	11.8	0.9	13	5.5	0.1	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
SMC_ScpA	PF02616.14	gi|284161166|ref|YP_003399789.1|	-	3.6e-15	56.5	3.0	1.3e-13	51.5	3.0	2.2	1	1	0	1	1	1	1	Segregation	and	condensation	protein	ScpA
Rad21_Rec8	PF04824.16	gi|284161166|ref|YP_003399789.1|	-	1.5e-05	24.2	0.0	3.2e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	Conserved	region	of	Rad21	/	Rec8	like	protein
Cnd2	PF05786.14	gi|284161166|ref|YP_003399789.1|	-	0.18	10.5	0.0	0.44	9.1	0.0	1.6	2	0	0	2	2	2	0	Condensin	complex	subunit	2
SMC_N	PF02463.19	gi|284161167|ref|YP_003399790.1|	-	7.8e-57	192.2	31.1	2.1e-56	190.8	31.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SMC_hinge	PF06470.13	gi|284161167|ref|YP_003399790.1|	-	3.7e-28	98.2	0.3	1.2e-27	96.5	0.3	2.0	1	0	0	1	1	1	1	SMC	proteins	Flexible	Hinge	Domain
AAA_23	PF13476.6	gi|284161167|ref|YP_003399790.1|	-	1.2e-17	65.1	22.7	1.2e-17	65.1	22.7	9.2	4	2	3	7	7	6	2	AAA	domain
AAA_15	PF13175.6	gi|284161167|ref|YP_003399790.1|	-	1.2e-16	61.4	31.9	1.2e-16	61.4	31.9	5.5	2	2	3	5	5	3	2	AAA	ATPase	domain
AAA_21	PF13304.6	gi|284161167|ref|YP_003399790.1|	-	4.5e-10	39.8	17.2	5.2e-07	29.8	0.0	5.5	3	2	2	5	5	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Spc7	PF08317.11	gi|284161167|ref|YP_003399790.1|	-	6.7e-09	35.0	128.4	0.0016	17.4	13.0	6.3	3	2	3	6	6	6	4	Spc7	kinetochore	protein
AAA_29	PF13555.6	gi|284161167|ref|YP_003399790.1|	-	4.6e-08	32.7	0.0	8.8e-08	31.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Laminin_II	PF06009.12	gi|284161167|ref|YP_003399790.1|	-	1.7e-07	31.4	89.2	6.4e-05	23.0	6.9	8.5	2	2	5	8	8	8	5	Laminin	Domain	II
APG6_N	PF17675.1	gi|284161167|ref|YP_003399790.1|	-	2.1e-05	25.1	143.6	0.039	14.5	6.6	9.3	2	2	7	9	9	9	5	Apg6	coiled-coil	region
Baculo_PEP_C	PF04513.12	gi|284161167|ref|YP_003399790.1|	-	0.00011	22.3	44.3	0.05	13.7	4.4	8.1	3	2	3	6	6	6	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
AAA_27	PF13514.6	gi|284161167|ref|YP_003399790.1|	-	0.0002	21.0	0.0	0.0002	21.0	0.0	6.6	6	1	1	7	7	7	1	AAA	domain
DUF3584	PF12128.8	gi|284161167|ref|YP_003399790.1|	-	0.00035	18.3	38.2	0.00035	18.3	38.2	3.4	2	2	0	2	2	2	2	Protein	of	unknown	function	(DUF3584)
DUF4201	PF13870.6	gi|284161167|ref|YP_003399790.1|	-	0.0011	18.8	12.1	0.0011	18.8	12.1	8.8	3	2	5	8	8	8	2	Domain	of	unknown	function	(DUF4201)
GAS	PF13851.6	gi|284161167|ref|YP_003399790.1|	-	0.005	16.2	19.8	0.005	16.2	19.8	6.9	2	2	1	6	6	6	3	Growth-arrest	specific	micro-tubule	binding
ATG16	PF08614.11	gi|284161167|ref|YP_003399790.1|	-	0.0061	16.8	18.8	0.0061	16.8	18.8	7.2	2	2	4	7	7	7	2	Autophagy	protein	16	(ATG16)
Seryl_tRNA_N	PF02403.22	gi|284161167|ref|YP_003399790.1|	-	0.013	15.7	12.9	0.013	15.7	12.9	10.0	2	2	7	9	9	9	0	Seryl-tRNA	synthetase	N-terminal	domain
Aida_N	PF08910.10	gi|284161167|ref|YP_003399790.1|	-	0.023	15.1	0.7	0.023	15.1	0.7	5.8	5	3	0	5	5	5	0	Aida	N-terminus
AAA_13	PF13166.6	gi|284161167|ref|YP_003399790.1|	-	0.035	12.7	109.0	0.049	12.3	16.8	5.9	3	2	3	6	6	6	0	AAA	domain
PilJ	PF13675.6	gi|284161167|ref|YP_003399790.1|	-	0.043	13.8	12.3	29	4.7	0.4	6.1	2	2	4	6	6	6	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF1664	PF07889.12	gi|284161167|ref|YP_003399790.1|	-	0.044	13.8	85.9	0.088	12.8	4.2	10.2	3	2	7	10	10	10	0	Protein	of	unknown	function	(DUF1664)
RTT107_BRCT_6	PF16771.5	gi|284161167|ref|YP_003399790.1|	-	0.097	12.8	0.0	0.097	12.8	0.0	4.6	4	2	1	5	5	4	0	Regulator	of	Ty1	transposition	protein	107	BRCT	domain
WXG100	PF06013.12	gi|284161167|ref|YP_003399790.1|	-	0.82	9.9	10.3	72	3.7	0.0	7.3	7	2	2	9	9	8	0	Proteins	of	100	residues	with	WXG
BLOC1_2	PF10046.9	gi|284161167|ref|YP_003399790.1|	-	0.92	9.8	104.2	0.059	13.7	6.1	10.8	5	3	4	10	10	10	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
FtsK_SpoIIIE	PF01580.18	gi|284161167|ref|YP_003399790.1|	-	1	8.7	7.9	12	5.1	1.1	4.0	3	1	0	3	3	3	0	FtsK/SpoIIIE	family
FUSC	PF04632.12	gi|284161167|ref|YP_003399790.1|	-	8	4.9	9.0	9.9	4.6	1.2	3.3	2	2	1	3	3	3	0	Fusaric	acid	resistance	protein	family
DUF1722	PF08349.11	gi|284161168|ref|YP_003399791.1|	-	0.00066	19.9	1.4	0.00084	19.6	1.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1722)
AA_synth	PF06684.11	gi|284161168|ref|YP_003399791.1|	-	0.0078	15.8	0.3	0.01	15.4	0.3	1.2	1	0	0	1	1	1	1	Amino	acid	synthesis
Baculo_PEP_C	PF04513.12	gi|284161168|ref|YP_003399791.1|	-	0.014	15.5	0.1	0.017	15.1	0.1	1.2	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
CLASP_N	PF12348.8	gi|284161168|ref|YP_003399791.1|	-	0.019	14.5	0.9	0.023	14.3	0.8	1.2	1	1	0	1	1	1	0	CLASP	N	terminal
Bacillus_HBL	PF05791.11	gi|284161168|ref|YP_003399791.1|	-	0.028	14.3	2.7	0.043	13.6	2.7	1.2	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
SlyX	PF04102.12	gi|284161168|ref|YP_003399791.1|	-	0.036	14.7	7.5	0.83	10.3	1.1	2.3	1	1	1	2	2	2	0	SlyX
NPV_P10	PF05531.12	gi|284161168|ref|YP_003399791.1|	-	0.039	14.4	1.3	61	4.2	0.1	2.3	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
MtrB	PF05440.12	gi|284161168|ref|YP_003399791.1|	-	0.049	14.0	1.2	0.22	11.9	0.1	2.0	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
SATase_N	PF06426.14	gi|284161168|ref|YP_003399791.1|	-	0.064	13.6	0.3	0.091	13.1	0.3	1.3	1	0	0	1	1	1	0	Serine	acetyltransferase,	N-terminal
FapA	PF03961.13	gi|284161168|ref|YP_003399791.1|	-	0.08	11.5	14.0	0.095	11.3	14.0	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Phlebovirus_NSM	PF07246.11	gi|284161168|ref|YP_003399791.1|	-	0.12	11.8	7.7	0.13	11.6	7.7	1.2	1	0	0	1	1	1	0	Phlebovirus	nonstructural	protein	NS-M
AATF-Che1	PF13339.6	gi|284161168|ref|YP_003399791.1|	-	0.13	13.0	7.2	0.3	11.8	7.2	1.6	1	1	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
DUF1664	PF07889.12	gi|284161168|ref|YP_003399791.1|	-	0.13	12.3	5.7	0.18	11.8	5.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF2203	PF09969.9	gi|284161168|ref|YP_003399791.1|	-	0.16	12.7	6.2	0.24	12.1	6.2	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
TMCO5	PF14992.6	gi|284161168|ref|YP_003399791.1|	-	0.17	11.5	19.0	0.19	11.3	19.0	1.1	1	0	0	1	1	1	0	TMCO5	family
Ubiq_cyt_C_chap	PF03981.12	gi|284161168|ref|YP_003399791.1|	-	0.21	11.6	1.8	0.27	11.3	1.5	1.3	1	1	0	1	1	1	0	Ubiquinol-cytochrome	C	chaperone
GHL15	PF14885.6	gi|284161168|ref|YP_003399791.1|	-	0.23	11.4	0.6	0.26	11.2	0.6	1.1	1	0	0	1	1	1	0	Hypothetical	glycosyl	hydrolase	family	15
Fez1	PF06818.15	gi|284161168|ref|YP_003399791.1|	-	0.27	11.6	12.0	0.43	11.0	12.0	1.3	1	0	0	1	1	1	0	Fez1
tRNA-synt_His	PF13393.6	gi|284161168|ref|YP_003399791.1|	-	0.31	10.3	2.8	0.35	10.1	2.8	1.1	1	0	0	1	1	1	0	Histidyl-tRNA	synthetase
Noelin-1	PF12308.8	gi|284161168|ref|YP_003399791.1|	-	0.33	11.0	2.3	0.81	9.7	0.2	2.1	1	1	0	2	2	2	0	Neurogenesis	glycoprotein
Fib_alpha	PF08702.10	gi|284161168|ref|YP_003399791.1|	-	0.33	11.1	6.8	0.88	9.7	2.1	2.0	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
AAA_13	PF13166.6	gi|284161168|ref|YP_003399791.1|	-	0.4	9.3	11.8	0.47	9.0	11.8	1.1	1	0	0	1	1	1	0	AAA	domain
Syntaxin-6_N	PF09177.11	gi|284161168|ref|YP_003399791.1|	-	0.55	10.8	12.1	7.4	7.2	12.1	2.4	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF4806	PF16064.5	gi|284161168|ref|YP_003399791.1|	-	0.57	10.5	5.1	7.9	6.8	1.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4806)
DUF641	PF04859.12	gi|284161168|ref|YP_003399791.1|	-	0.82	10.0	15.1	1.6	9.1	3.9	2.4	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
FliJ	PF02050.16	gi|284161168|ref|YP_003399791.1|	-	0.92	9.7	12.0	1.4	9.1	12.0	1.3	1	0	0	1	1	1	0	Flagellar	FliJ	protein
DUF16	PF01519.16	gi|284161168|ref|YP_003399791.1|	-	1.4	9.5	9.7	5.7	7.5	8.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
YvrJ	PF12841.7	gi|284161168|ref|YP_003399791.1|	-	1.4	8.5	9.7	1.6	8.4	0.1	2.6	3	0	0	3	3	2	0	YvrJ	protein	family
APG6_N	PF17675.1	gi|284161168|ref|YP_003399791.1|	-	1.7	9.2	26.0	7.8	7.0	26.0	1.8	1	1	0	1	1	1	0	Apg6	coiled-coil	region
Allexi_40kDa	PF05549.11	gi|284161168|ref|YP_003399791.1|	-	1.8	8.0	4.1	1.7	8.1	3.7	1.3	1	1	0	1	1	1	0	Allexivirus	40kDa	protein
DASH_Spc19	PF08287.11	gi|284161168|ref|YP_003399791.1|	-	3.9	7.3	15.7	0.36	10.7	5.6	2.0	1	1	1	2	2	2	0	Spc19
HIP1_clath_bdg	PF16515.5	gi|284161168|ref|YP_003399791.1|	-	5.5	7.7	16.6	6.3	7.5	4.8	2.8	1	1	2	3	3	3	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
Ax_dynein_light	PF10211.9	gi|284161168|ref|YP_003399791.1|	-	6	6.8	17.1	17	5.3	17.1	1.7	1	1	0	1	1	1	0	Axonemal	dynein	light	chain
FAM76	PF16046.5	gi|284161168|ref|YP_003399791.1|	-	8.2	5.7	12.1	2.3	7.5	9.2	1.4	1	1	0	1	1	1	0	FAM76	protein
Val_tRNA-synt_C	PF10458.9	gi|284161168|ref|YP_003399791.1|	-	9.5	6.6	21.7	0.67	10.3	12.9	3.1	2	1	0	2	2	2	0	Valyl	tRNA	synthetase	tRNA	binding	arm
Meth_synt_2	PF01717.18	gi|284161169|ref|YP_003399792.1|	-	2.6e-68	230.7	0.0	3.6e-68	230.2	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.12	gi|284161169|ref|YP_003399792.1|	-	2.9e-10	40.2	0.0	4.6e-10	39.5	0.0	1.3	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_1	PF08267.12	gi|284161170|ref|YP_003399793.1|	-	1e-27	97.5	3.9	2.7e-26	92.8	1.3	2.0	1	1	1	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.18	gi|284161170|ref|YP_003399793.1|	-	7.3e-22	78.1	0.0	3.5e-21	75.8	0.0	1.8	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
JHD	PF17811.1	gi|284161170|ref|YP_003399793.1|	-	0.042	14.4	0.3	0.12	12.9	0.3	1.8	1	0	0	1	1	1	0	Jumonji	helical	domain
EIF_2_alpha	PF07541.12	gi|284161171|ref|YP_003399794.1|	-	5.2e-25	87.8	1.0	5.2e-25	87.8	1.0	1.6	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|284161171|ref|YP_003399794.1|	-	3.1e-16	59.5	0.3	7.1e-16	58.3	0.3	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
EXOSC1	PF10447.9	gi|284161171|ref|YP_003399794.1|	-	0.087	13.4	0.0	1.1	9.9	0.0	2.2	1	1	1	2	2	2	0	Exosome	component	EXOSC1/CSL4
DUF2063	PF09836.9	gi|284161171|ref|YP_003399794.1|	-	0.22	11.8	0.0	1.7	8.9	0.0	2.1	1	1	1	2	2	2	0	Putative	DNA-binding	domain
TFIIB	PF00382.19	gi|284161172|ref|YP_003399795.1|	-	1.2e-45	153.5	3.6	8.5e-23	80.2	0.3	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|284161172|ref|YP_003399795.1|	-	1.7e-20	72.2	1.1	3.4e-20	71.3	1.1	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.16	gi|284161172|ref|YP_003399795.1|	-	2.7e-05	23.6	0.9	0.003	17.0	0.2	3.8	2	1	1	3	3	3	1	Sigma-70,	region	4
A2L_zn_ribbon	PF08792.10	gi|284161172|ref|YP_003399795.1|	-	0.0014	18.3	3.4	0.024	14.4	3.3	2.3	1	1	1	2	2	2	2	A2L	zinc	ribbon	domain
HTH_AsnC-type	PF13404.6	gi|284161172|ref|YP_003399795.1|	-	0.0016	18.2	0.5	0.029	14.2	0.3	2.9	2	1	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Lar_restr_allev	PF14354.6	gi|284161172|ref|YP_003399795.1|	-	0.011	16.1	0.2	0.036	14.4	0.2	2.0	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.10	gi|284161172|ref|YP_003399795.1|	-	0.011	15.9	3.9	0.19	11.9	0.5	2.6	1	1	1	2	2	2	0	Zinc	ribbon	domain
Sigma70_r4_2	PF08281.12	gi|284161172|ref|YP_003399795.1|	-	0.012	15.3	0.4	0.73	9.6	0.2	3.5	2	1	1	3	3	3	0	Sigma-70,	region	4
RB_B	PF01857.20	gi|284161172|ref|YP_003399795.1|	-	0.015	15.3	0.1	0.081	13.0	0.0	2.2	3	0	0	3	3	2	0	Retinoblastoma-associated	protein	B	domain
HTH_3	PF01381.22	gi|284161172|ref|YP_003399795.1|	-	0.017	15.2	1.6	1.5	8.9	0.0	3.8	3	1	1	4	4	4	0	Helix-turn-helix
UPF0253	PF06786.12	gi|284161172|ref|YP_003399795.1|	-	0.02	15.1	0.1	0.29	11.4	0.0	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0253)
Cyclin_C	PF02984.19	gi|284161172|ref|YP_003399795.1|	-	0.046	13.8	0.0	5	7.2	0.0	2.3	2	0	0	2	2	2	0	Cyclin,	C-terminal	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161172|ref|YP_003399795.1|	-	0.056	13.4	0.8	0.14	12.1	0.8	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
HTH_Tnp_ISL3	PF13542.6	gi|284161172|ref|YP_003399795.1|	-	0.057	12.8	0.0	0.25	10.8	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.7	gi|284161172|ref|YP_003399795.1|	-	0.065	13.2	0.5	0.14	12.2	0.5	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HTH_31	PF13560.6	gi|284161172|ref|YP_003399795.1|	-	0.067	13.5	3.1	6.7	7.1	0.1	3.7	3	1	0	3	3	3	0	Helix-turn-helix	domain
Cyclin_N	PF00134.23	gi|284161172|ref|YP_003399795.1|	-	0.094	12.5	0.0	0.66	9.7	0.0	2.2	2	0	0	2	2	2	0	Cyclin,	N-terminal	domain
Auto_anti-p27	PF06677.12	gi|284161172|ref|YP_003399795.1|	-	0.11	12.7	1.7	0.21	11.8	1.7	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DZR	PF12773.7	gi|284161172|ref|YP_003399795.1|	-	0.16	12.0	0.2	0.4	10.7	0.2	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
Nudix_N_2	PF14803.6	gi|284161172|ref|YP_003399795.1|	-	0.18	11.8	2.4	0.66	9.9	2.4	2.0	1	0	0	1	1	1	0	Nudix	N-terminal
HTH_23	PF13384.6	gi|284161172|ref|YP_003399795.1|	-	0.6	10.0	4.1	1.4	8.8	0.1	3.4	3	0	0	3	3	3	0	Homeodomain-like	domain
zf-ribbon_3	PF13248.6	gi|284161172|ref|YP_003399795.1|	-	0.63	9.5	4.7	6.8	6.3	4.7	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-ACC	PF17848.1	gi|284161172|ref|YP_003399795.1|	-	0.77	9.9	4.0	21	5.3	0.0	3.0	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
Prok-RING_1	PF14446.6	gi|284161172|ref|YP_003399795.1|	-	0.96	9.4	2.8	0.67	9.9	0.2	1.9	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
UPF0547	PF10571.9	gi|284161172|ref|YP_003399795.1|	-	3.3	7.9	4.9	29	4.8	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
NAD_synthase	PF02540.17	gi|284161173|ref|YP_003399796.1|	-	5.7e-12	45.3	0.0	7.9e-12	44.8	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|284161173|ref|YP_003399796.1|	-	1.1e-09	38.1	0.5	3.4e-08	33.2	0.2	2.8	2	1	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|284161173|ref|YP_003399796.1|	-	6.5e-08	32.4	1.0	6.4e-07	29.1	1.0	2.3	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.21	gi|284161173|ref|YP_003399796.1|	-	6.4e-06	26.1	0.0	1e-05	25.4	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ATP_bind_3	PF01171.20	gi|284161173|ref|YP_003399796.1|	-	0.00032	20.5	0.3	0.002	17.9	0.3	2.2	1	1	1	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|284161173|ref|YP_003399796.1|	-	0.00098	18.0	2.4	0.025	13.4	0.9	2.5	2	1	1	3	3	3	1	tRNA	methyl	transferase
YdjO	PF14169.6	gi|284161173|ref|YP_003399796.1|	-	0.023	14.4	0.6	0.042	13.6	0.6	1.3	1	0	0	1	1	1	0	Cold-inducible	protein	YdjO
PAPS_reduct	PF01507.19	gi|284161173|ref|YP_003399796.1|	-	0.12	12.5	0.1	0.58	10.2	0.1	2.1	2	0	0	2	2	2	0	Phosphoadenosine	phosphosulfate	reductase	family
SinI	PF08671.10	gi|284161173|ref|YP_003399796.1|	-	0.2	11.5	0.9	3.5	7.5	0.3	2.7	3	0	0	3	3	3	0	Anti-repressor	SinI
DUF919	PF06034.11	gi|284161173|ref|YP_003399796.1|	-	0.2	11.5	2.1	0.22	11.4	0.3	2.0	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Fe_dep_repress	PF01325.19	gi|284161174|ref|YP_003399797.1|	-	2.1e-25	88.7	0.5	3.8e-25	87.8	0.5	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|284161174|ref|YP_003399797.1|	-	2.6e-17	62.7	1.9	3.9e-17	62.1	0.6	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HrcA_DNA-bdg	PF03444.15	gi|284161174|ref|YP_003399797.1|	-	2.3e-05	23.9	0.0	5.8e-05	22.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Rrf2	PF02082.20	gi|284161174|ref|YP_003399797.1|	-	0.00023	21.4	0.0	0.0004	20.7	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.7	gi|284161174|ref|YP_003399797.1|	-	0.00026	20.8	0.0	0.00052	19.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|284161174|ref|YP_003399797.1|	-	0.0014	18.6	0.0	0.0027	17.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|284161174|ref|YP_003399797.1|	-	0.0018	18.2	0.0	0.0043	17.0	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|284161174|ref|YP_003399797.1|	-	0.0033	17.3	0.1	0.0085	16.0	0.1	1.8	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|284161174|ref|YP_003399797.1|	-	0.0054	16.6	0.9	0.058	13.3	0.0	2.7	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
Put_DNA-bind_N	PF06971.13	gi|284161174|ref|YP_003399797.1|	-	0.0067	16.4	0.2	0.023	14.7	0.1	2.0	2	0	0	2	2	2	1	Putative	DNA-binding	protein	N-terminus
HTH_40	PF14493.6	gi|284161174|ref|YP_003399797.1|	-	0.0088	16.5	0.0	0.028	14.9	0.0	2.0	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF2284	PF10050.9	gi|284161174|ref|YP_003399797.1|	-	0.012	15.4	0.8	0.02	14.6	0.8	1.4	1	0	0	1	1	1	0	Predicted	metal-binding	protein	(DUF2284)
CtsR	PF05848.11	gi|284161174|ref|YP_003399797.1|	-	0.015	15.2	0.1	0.034	14.1	0.1	1.6	1	0	0	1	1	1	0	CtsR	N-terminal	HTH	domain
FeoA	PF04023.14	gi|284161174|ref|YP_003399797.1|	-	0.02	15.1	0.2	0.08	13.2	0.1	2.1	2	0	0	2	2	2	0	FeoA	domain
HTH_IclR	PF09339.10	gi|284161174|ref|YP_003399797.1|	-	0.02	14.7	0.0	0.033	14.0	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161174|ref|YP_003399797.1|	-	0.026	14.1	0.0	0.053	13.1	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
FAM110_C	PF14160.6	gi|284161174|ref|YP_003399797.1|	-	0.041	15.0	0.0	0.064	14.3	0.0	1.4	1	0	0	1	1	1	0	Centrosome-associated	C	terminus
HTH_45	PF14947.6	gi|284161174|ref|YP_003399797.1|	-	0.053	13.5	0.1	0.11	12.5	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_27	PF13463.6	gi|284161174|ref|YP_003399797.1|	-	0.074	13.6	0.0	0.23	12.0	0.0	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
FOP_dimer	PF09398.10	gi|284161174|ref|YP_003399797.1|	-	0.74	10.1	4.9	1.9	8.8	0.1	3.0	3	0	0	3	3	3	0	FOP	N	terminal	dimerisation	domain
DUF5371	PF17341.2	gi|284161175|ref|YP_003399798.1|	-	1e-34	118.5	5.3	1.2e-34	118.3	5.3	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5371)
DUF3689	PF12463.8	gi|284161175|ref|YP_003399798.1|	-	0.022	14.1	0.0	0.022	14.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3689)
DUF4253	PF14062.6	gi|284161175|ref|YP_003399798.1|	-	0.026	14.7	0.0	0.026	14.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4253)
PIN_9	PF18477.1	gi|284161175|ref|YP_003399798.1|	-	0.033	14.5	0.2	0.035	14.4	0.2	1.1	1	0	0	1	1	1	0	PIN	like	domain
DUF3837	PF12939.7	gi|284161175|ref|YP_003399798.1|	-	0.07	13.5	0.5	0.068	13.6	0.5	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3837)
RHH_5	PF07878.11	gi|284161175|ref|YP_003399798.1|	-	0.12	12.2	0.2	0.26	11.2	0.2	1.4	1	0	0	1	1	1	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
CxxCxxCC	PF03692.15	gi|284161176|ref|YP_003399799.1|	-	9.4e-12	45.5	3.7	2e-11	44.4	3.6	1.5	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
DUF1759	PF03564.15	gi|284161177|ref|YP_003399800.1|	-	0.018	15.0	0.1	0.058	13.3	0.2	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1759)
UPF0047	PF01894.17	gi|284161178|ref|YP_003399801.1|	-	1.3e-34	118.7	0.0	1.6e-34	118.5	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
Ham1p_like	PF01725.16	gi|284161179|ref|YP_003399802.1|	-	2.1e-49	168.0	0.0	2.3e-49	167.8	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
CDP-OH_P_transf	PF01066.21	gi|284161179|ref|YP_003399802.1|	-	0.23	12.3	0.0	0.28	12.0	0.0	1.2	1	0	0	1	1	1	0	CDP-alcohol	phosphatidyltransferase
CofC	PF01983.16	gi|284161180|ref|YP_003399803.1|	-	7.4e-65	218.2	0.5	9.1e-65	217.9	0.5	1.0	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
DUF2064	PF09837.9	gi|284161180|ref|YP_003399803.1|	-	0.081	12.8	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
NTP_transf_3	PF12804.7	gi|284161180|ref|YP_003399803.1|	-	0.25	11.7	0.0	0.71	10.2	0.0	1.7	1	1	0	1	1	1	0	MobA-like	NTP	transferase	domain
PBP	PF01161.20	gi|284161181|ref|YP_003399804.1|	-	1.8e-30	105.9	0.0	2.2e-30	105.6	0.0	1.1	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
SepSecS	PF05889.13	gi|284161182|ref|YP_003399805.1|	-	6.4e-54	183.1	0.1	9e-54	182.6	0.1	1.1	1	0	0	1	1	1	1	O-phosphoseryl-tRNA(Sec)	selenium	transferase,	SepSecS
Aminotran_5	PF00266.19	gi|284161182|ref|YP_003399805.1|	-	3.9e-14	52.4	0.0	6e-14	51.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|284161182|ref|YP_003399805.1|	-	1.6e-09	37.5	0.0	2e-09	37.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|284161182|ref|YP_003399805.1|	-	1.4e-06	27.9	0.0	1.9e-06	27.4	0.0	1.1	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Pyridoxal_deC	PF00282.19	gi|284161182|ref|YP_003399805.1|	-	0.0011	17.7	0.0	0.0016	17.2	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Beta_elim_lyase	PF01212.21	gi|284161182|ref|YP_003399805.1|	-	0.012	14.9	0.0	0.016	14.5	0.0	1.2	1	0	0	1	1	1	0	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|284161182|ref|YP_003399805.1|	-	0.012	14.1	0.0	0.015	13.8	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
GDC-P	PF02347.16	gi|284161182|ref|YP_003399805.1|	-	0.028	13.3	0.0	0.041	12.7	0.0	1.2	1	0	0	1	1	1	0	Glycine	cleavage	system	P-protein
OKR_DC_1	PF01276.20	gi|284161182|ref|YP_003399805.1|	-	0.038	12.7	0.0	0.058	12.1	0.0	1.3	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
AIM5	PF17050.5	gi|284161182|ref|YP_003399805.1|	-	0.33	11.8	0.8	0.73	10.7	0.8	1.5	1	0	0	1	1	1	0	Altered	inheritance	of	mitochondria	5
DUF4579	PF15158.6	gi|284161183|ref|YP_003399806.1|	-	0.00027	20.8	1.4	0.00032	20.5	1.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4579)
Wzy_C	PF04932.15	gi|284161183|ref|YP_003399806.1|	-	0.0038	16.9	0.6	0.0039	16.8	0.6	1.1	1	0	0	1	1	1	1	O-Antigen	ligase
DUF4131	PF13567.6	gi|284161183|ref|YP_003399806.1|	-	0.049	13.3	0.1	0.066	12.9	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF2207	PF09972.9	gi|284161183|ref|YP_003399806.1|	-	0.4	9.4	6.1	0.52	9.0	6.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
TBP	PF00352.21	gi|284161184|ref|YP_003399807.1|	-	3.2e-62	206.5	0.0	3.9e-31	106.8	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|284161184|ref|YP_003399807.1|	-	3.6e-08	33.4	0.0	0.0049	17.0	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
PucR	PF07905.11	gi|284161184|ref|YP_003399807.1|	-	0.052	13.8	0.0	1.2	9.5	0.0	2.2	1	1	0	2	2	2	0	Purine	catabolism	regulatory	protein-like	family
LAL_C2	PF18603.1	gi|284161184|ref|YP_003399807.1|	-	0.093	12.9	0.1	0.7	10.1	0.0	2.1	2	0	0	2	2	2	0	L-amino	acid	ligase	C-terminal	domain	2
Metallophos	PF00149.28	gi|284161185|ref|YP_003399808.1|	-	5.1e-13	50.0	0.4	9.1e-13	49.2	0.4	1.5	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|284161185|ref|YP_003399808.1|	-	1.1e-12	48.5	0.0	2.8e-12	47.2	0.0	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
SMC_N	PF02463.19	gi|284161186|ref|YP_003399809.1|	-	1.1e-24	87.1	5.7	3.5e-13	49.5	2.8	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284161186|ref|YP_003399809.1|	-	9.5e-23	81.5	41.1	5e-22	79.1	0.1	3.5	1	1	2	3	3	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284161186|ref|YP_003399809.1|	-	1.3e-13	51.9	128.4	5.3e-13	49.9	53.6	7.5	1	1	3	4	4	2	1	AAA	domain
Rad50_zn_hook	PF04423.14	gi|284161186|ref|YP_003399809.1|	-	1.5e-12	47.2	1.3	1.5e-12	47.2	1.3	10.1	13	0	0	13	13	9	1	Rad50	zinc	hook	motif
Spc7	PF08317.11	gi|284161186|ref|YP_003399809.1|	-	4.7e-08	32.3	107.1	0.00057	18.9	12.2	5.2	1	1	4	5	5	5	3	Spc7	kinetochore	protein
AAA_21	PF13304.6	gi|284161186|ref|YP_003399809.1|	-	1.6e-07	31.4	12.8	7.2e-05	22.7	0.0	4.3	3	2	0	3	3	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_13	PF13166.6	gi|284161186|ref|YP_003399809.1|	-	4e-06	25.8	87.7	0.046	12.4	26.3	5.3	2	1	2	4	4	4	3	AAA	domain
AAA_29	PF13555.6	gi|284161186|ref|YP_003399809.1|	-	5.9e-06	25.9	0.0	1e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Fib_alpha	PF08702.10	gi|284161186|ref|YP_003399809.1|	-	4.3e-05	23.7	60.9	0.044	14.0	10.2	6.2	2	2	3	5	5	5	3	Fibrinogen	alpha/beta	chain	family
AAA_27	PF13514.6	gi|284161186|ref|YP_003399809.1|	-	5e-05	23.0	0.0	5e-05	23.0	0.0	6.1	6	2	1	7	7	7	1	AAA	domain
DivIC	PF04977.15	gi|284161186|ref|YP_003399809.1|	-	6.9e-05	22.6	0.5	6.9e-05	22.6	0.5	10.8	5	3	4	10	10	10	3	Septum	formation	initiator
WXG100	PF06013.12	gi|284161186|ref|YP_003399809.1|	-	0.00021	21.5	3.7	0.38	11.0	0.0	6.8	5	2	3	8	8	7	1	Proteins	of	100	residues	with	WXG
Snapin_Pallidin	PF14712.6	gi|284161186|ref|YP_003399809.1|	-	0.00034	21.0	66.6	0.11	13.0	1.4	8.6	2	1	5	8	8	8	4	Snapin/Pallidin
Prominin	PF05478.11	gi|284161186|ref|YP_003399809.1|	-	0.0013	16.9	46.6	0.019	12.9	1.4	4.5	1	1	2	4	4	4	3	Prominin
DUF1664	PF07889.12	gi|284161186|ref|YP_003399809.1|	-	0.0015	18.6	56.2	0.0077	16.3	7.2	7.8	2	2	4	8	8	8	4	Protein	of	unknown	function	(DUF1664)
SbcCD_C	PF13558.6	gi|284161186|ref|YP_003399809.1|	-	0.0042	17.3	0.0	0.01	16.0	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
DUF4201	PF13870.6	gi|284161186|ref|YP_003399809.1|	-	0.0047	16.7	16.2	0.0047	16.7	16.2	7.1	1	1	5	7	7	6	4	Domain	of	unknown	function	(DUF4201)
DUF3450	PF11932.8	gi|284161186|ref|YP_003399809.1|	-	0.0052	16.1	0.3	0.0052	16.1	0.3	7.8	1	1	7	9	9	9	2	Protein	of	unknown	function	(DUF3450)
Baculo_PEP_C	PF04513.12	gi|284161186|ref|YP_003399809.1|	-	0.0052	16.8	24.3	4.8	7.2	4.8	6.8	2	2	3	6	6	6	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF3584	PF12128.8	gi|284161186|ref|YP_003399809.1|	-	0.012	13.2	82.8	0.065	10.7	18.6	4.1	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF3584)
Syntaxin-6_N	PF09177.11	gi|284161186|ref|YP_003399809.1|	-	0.016	15.7	2.9	0.016	15.7	2.9	8.4	1	1	3	4	4	2	0	Syntaxin	6,	N-terminal
Laminin_II	PF06009.12	gi|284161186|ref|YP_003399809.1|	-	0.019	15.0	1.7	0.019	15.0	1.7	7.0	1	1	5	8	8	7	0	Laminin	Domain	II
Prefoldin	PF02996.17	gi|284161186|ref|YP_003399809.1|	-	0.031	14.2	0.1	0.031	14.2	0.1	10.9	4	2	6	11	11	10	0	Prefoldin	subunit
DUF948	PF06103.11	gi|284161186|ref|YP_003399809.1|	-	0.046	14.0	25.1	1.2	9.5	0.4	7.3	3	3	2	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF948)
NPV_P10	PF05531.12	gi|284161186|ref|YP_003399809.1|	-	0.064	13.7	29.7	5.8	7.5	2.8	8.1	5	3	2	7	7	7	0	Nucleopolyhedrovirus	P10	protein
ABC_tran	PF00005.27	gi|284161186|ref|YP_003399809.1|	-	0.069	13.7	18.6	9.4	6.8	0.0	5.0	1	1	0	2	2	1	0	ABC	transporter
FlaC_arch	PF05377.11	gi|284161186|ref|YP_003399809.1|	-	0.097	13.1	0.4	0.097	13.1	0.4	11.3	6	4	4	10	10	8	0	Flagella	accessory	protein	C	(FlaC)
RecR	PF02132.15	gi|284161186|ref|YP_003399809.1|	-	0.2	11.3	0.8	1.2	8.7	0.1	2.8	3	0	0	3	3	2	0	RecR	protein
FUSC	PF04632.12	gi|284161186|ref|YP_003399809.1|	-	0.54	8.7	12.7	0.47	8.9	0.2	3.2	2	1	0	2	2	2	0	Fusaric	acid	resistance	protein	family
GAS	PF13851.6	gi|284161186|ref|YP_003399809.1|	-	1.1	8.6	119.7	0.017	14.5	15.5	6.8	2	2	6	8	8	8	0	Growth-arrest	specific	micro-tubule	binding
SHE3	PF17078.5	gi|284161186|ref|YP_003399809.1|	-	1.4	8.5	87.7	0.031	14.0	12.1	5.2	1	1	3	5	5	5	0	SWI5-dependent	HO	expression	protein	3
AAA_22	PF13401.6	gi|284161186|ref|YP_003399809.1|	-	1.6	9.0	4.7	14	6.0	0.0	4.1	3	1	0	3	3	3	0	AAA	domain
MukB	PF04310.12	gi|284161186|ref|YP_003399809.1|	-	1.6	8.4	0.0	1.6	8.4	0.0	7.0	4	2	4	9	9	9	0	MukB	N-terminal
DASH_Dam1	PF08653.10	gi|284161186|ref|YP_003399809.1|	-	3.6	7.5	29.7	19	5.2	0.0	9.6	11	1	1	12	12	12	0	DASH	complex	subunit	Dam1
Sec34	PF04136.15	gi|284161186|ref|YP_003399809.1|	-	6.5	6.6	56.2	4.3	7.2	0.2	7.8	2	2	5	8	8	8	0	Sec34-like	family
HemX	PF04375.14	gi|284161186|ref|YP_003399809.1|	-	7	5.8	39.7	1.2	8.4	1.8	6.4	1	1	7	8	8	8	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
NurA	PF09376.10	gi|284161187|ref|YP_003399810.1|	-	8.8e-25	87.8	2.1	1.2e-24	87.3	2.1	1.2	1	0	0	1	1	1	1	NurA	domain
eIF-1a	PF01176.19	gi|284161189|ref|YP_003399812.1|	-	4.5e-26	90.4	0.5	5.4e-26	90.2	0.5	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Myosin_N	PF02736.19	gi|284161189|ref|YP_003399812.1|	-	0.035	13.9	0.9	0.076	12.9	0.1	1.9	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
tRNA-synt_1b	PF00579.25	gi|284161190|ref|YP_003399813.1|	-	1.3e-60	205.2	0.0	1.6e-60	205.0	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.18	gi|284161190|ref|YP_003399813.1|	-	6e-06	25.4	0.0	0.013	14.5	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.19	gi|284161190|ref|YP_003399813.1|	-	0.015	14.6	0.0	0.051	12.9	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
RICH	PF05062.12	gi|284161190|ref|YP_003399813.1|	-	0.07	13.5	1.4	0.2	12.0	0.0	2.4	2	0	0	2	2	2	0	RICH	domain
tRNA-synt_1	PF00133.22	gi|284161190|ref|YP_003399813.1|	-	0.11	10.8	0.0	0.17	10.1	0.0	1.4	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|284161190|ref|YP_003399813.1|	-	0.13	11.0	0.0	0.54	8.9	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(M)
Ribosomal_L15e	PF00827.17	gi|284161191|ref|YP_003399814.1|	-	3.8e-80	268.1	9.4	4.3e-80	268.0	9.4	1.0	1	0	0	1	1	1	1	Ribosomal	L15
Hydrolase_4	PF12146.8	gi|284161192|ref|YP_003399815.1|	-	2.9e-12	46.4	0.0	3.7e-06	26.4	0.0	2.2	1	1	0	2	2	2	2	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|284161192|ref|YP_003399815.1|	-	2.2e-10	40.6	0.0	3.1e-06	27.0	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|284161192|ref|YP_003399815.1|	-	3.6e-08	34.3	0.0	8.6e-07	29.8	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
FSH1	PF03959.13	gi|284161192|ref|YP_003399815.1|	-	2.9e-05	23.8	0.0	6.2e-05	22.8	0.0	1.6	1	1	0	1	1	1	1	Serine	hydrolase	(FSH1)
Peptidase_S9	PF00326.21	gi|284161192|ref|YP_003399815.1|	-	0.0008	18.9	0.0	0.0012	18.4	0.0	1.4	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_4	PF08386.10	gi|284161192|ref|YP_003399815.1|	-	0.0013	18.8	0.0	0.0027	17.8	0.0	1.5	1	0	0	1	1	1	1	TAP-like	protein
Peptidase_S15	PF02129.18	gi|284161192|ref|YP_003399815.1|	-	0.0039	16.8	0.0	0.38	10.3	0.0	2.1	2	0	0	2	2	2	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_2	PF02230.16	gi|284161192|ref|YP_003399815.1|	-	0.012	15.5	0.0	0.14	12.0	0.0	2.4	3	0	0	3	3	3	0	Phospholipase/Carboxylesterase
DLH	PF01738.18	gi|284161192|ref|YP_003399815.1|	-	0.021	14.4	0.0	0.075	12.6	0.0	1.8	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
UPF0227	PF05728.12	gi|284161192|ref|YP_003399815.1|	-	0.074	13.0	0.0	0.2	11.6	0.0	1.7	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
PhoPQ_related	PF10142.9	gi|284161192|ref|YP_003399815.1|	-	0.2	10.3	0.0	0.27	9.9	0.0	1.1	1	0	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
LIP	PF03583.14	gi|284161192|ref|YP_003399815.1|	-	0.2	10.9	0.0	0.33	10.2	0.0	1.5	1	1	0	1	1	1	0	Secretory	lipase
BPA_C	PF18040.1	gi|284161193|ref|YP_003399816.1|	-	0.22	11.4	0.0	0.37	10.7	0.0	1.3	1	0	0	1	1	1	0	beta	porphyranase	A	C-terminal
AP_endonuc_2	PF01261.24	gi|284161194|ref|YP_003399817.1|	-	0.089	12.2	0.0	0.11	11.9	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
PurS	PF02700.14	gi|284161195|ref|YP_003399818.1|	-	1.6e-29	101.9	1.4	1.7e-29	101.8	1.4	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Dabb	PF07876.12	gi|284161195|ref|YP_003399818.1|	-	0.026	15.2	0.6	0.24	12.1	0.1	1.9	1	1	1	2	2	2	0	Stress	responsive	A/B	Barrel	Domain
AIRS_C	PF02769.22	gi|284161196|ref|YP_003399819.1|	-	1.1e-52	178.3	1.7	7.6e-36	123.6	0.3	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|284161196|ref|YP_003399819.1|	-	6.6e-36	122.8	0.3	2.1e-20	73.2	0.2	2.5	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
FGAR-AT_linker	PF18072.1	gi|284161196|ref|YP_003399819.1|	-	4.2e-21	75.2	0.1	1.3e-20	73.7	0.1	1.9	1	0	0	1	1	1	1	Formylglycinamide	ribonucleotide	amidotransferase	linker	domain
DUF1564	PF07600.11	gi|284161196|ref|YP_003399819.1|	-	0.054	13.2	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1564)
MTS	PF05175.14	gi|284161197|ref|YP_003399820.1|	-	1.1e-06	28.3	0.0	7.6e-06	25.6	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|284161197|ref|YP_003399820.1|	-	0.00098	19.8	0.0	0.0027	18.4	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0146	PF03686.13	gi|284161197|ref|YP_003399820.1|	-	0.0013	18.6	0.1	0.0023	17.8	0.1	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
Methyltransf_11	PF08241.12	gi|284161197|ref|YP_003399820.1|	-	0.017	15.7	0.0	0.033	14.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
PrmA	PF06325.13	gi|284161197|ref|YP_003399820.1|	-	0.026	13.9	0.0	0.059	12.7	0.0	1.5	2	0	0	2	2	2	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_12	PF08242.12	gi|284161197|ref|YP_003399820.1|	-	0.044	14.5	0.0	0.12	13.1	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
NodS	PF05401.11	gi|284161197|ref|YP_003399820.1|	-	0.057	13.0	0.0	0.077	12.6	0.0	1.2	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Methyltransf_23	PF13489.6	gi|284161197|ref|YP_003399820.1|	-	0.1	12.4	0.0	0.13	12.1	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
RrnaAD	PF00398.20	gi|284161199|ref|YP_003399822.1|	-	1.8e-50	171.5	0.0	4.9e-50	170.0	0.0	1.5	1	1	1	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|284161199|ref|YP_003399822.1|	-	5.8e-09	36.5	0.0	9.6e-09	35.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284161199|ref|YP_003399822.1|	-	8.1e-07	29.6	0.0	1.7e-06	28.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284161199|ref|YP_003399822.1|	-	1.2e-05	25.9	0.0	2.3e-05	25.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|284161199|ref|YP_003399822.1|	-	0.00027	20.8	0.0	0.0004	20.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284161199|ref|YP_003399822.1|	-	0.0015	18.4	0.0	0.0025	17.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|284161199|ref|YP_003399822.1|	-	0.028	14.2	0.0	0.043	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.14	gi|284161199|ref|YP_003399822.1|	-	0.039	13.5	0.0	0.062	12.9	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_32	PF13679.6	gi|284161199|ref|YP_003399822.1|	-	0.06	13.3	0.0	0.1	12.6	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_PK	PF05891.12	gi|284161199|ref|YP_003399822.1|	-	0.073	12.6	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	AdoMet	dependent	proline	di-methyltransferase
MetW	PF07021.12	gi|284161199|ref|YP_003399822.1|	-	0.099	12.2	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
DOT1	PF08123.13	gi|284161199|ref|YP_003399822.1|	-	0.11	12.0	0.0	0.19	11.2	0.0	1.3	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Asn_synthase	PF00733.21	gi|284161201|ref|YP_003399824.1|	-	7.6e-32	111.3	1.7	2.3e-15	57.1	0.0	2.4	1	1	2	3	3	3	2	Asparagine	synthase
GATase_7	PF13537.6	gi|284161201|ref|YP_003399824.1|	-	0.0045	16.9	0.0	0.024	14.6	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
ATP_bind_3	PF01171.20	gi|284161201|ref|YP_003399824.1|	-	0.27	11.0	2.5	7.8	6.2	2.5	2.3	1	1	0	1	1	1	0	PP-loop	family
CxxCxxCC	PF03692.15	gi|284161202|ref|YP_003399825.1|	-	1.3e-18	67.5	1.3	1.5e-18	67.2	1.3	1.2	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
TYW3	PF02676.14	gi|284161203|ref|YP_003399826.1|	-	1.7e-43	148.4	0.0	2.7e-43	147.8	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	TYW3
tRNA-synt_2c	PF01411.19	gi|284161204|ref|YP_003399827.1|	-	4.1e-138	461.3	0.0	6.8e-138	460.6	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.19	gi|284161204|ref|YP_003399827.1|	-	4.7e-16	59.5	5.7	1.3e-15	58.0	5.7	1.8	1	0	0	1	1	1	1	DHHA1	domain
tRNA_SAD	PF07973.14	gi|284161204|ref|YP_003399827.1|	-	8.2e-15	54.6	4.0	1e-14	54.3	1.7	2.3	2	0	0	2	2	2	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
THUMP	PF02926.17	gi|284161204|ref|YP_003399827.1|	-	6.3	6.9	13.3	1.1	9.4	5.9	2.9	2	1	1	3	3	3	0	THUMP	domain
Fer4	PF00037.27	gi|284161205|ref|YP_003399828.1|	-	7.1e-19	66.8	38.4	4.4e-06	26.3	3.2	4.8	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161205|ref|YP_003399828.1|	-	3.4e-16	58.5	33.1	6.4e-06	26.0	0.6	4.1	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284161205|ref|YP_003399828.1|	-	3.4e-15	55.9	46.2	6.8e-07	29.4	9.7	3.2	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161205|ref|YP_003399828.1|	-	5.2e-15	54.5	34.9	8.8e-05	22.4	1.9	4.1	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161205|ref|YP_003399828.1|	-	1.3e-13	51.3	31.4	0.00018	22.1	1.9	3.9	2	1	3	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161205|ref|YP_003399828.1|	-	8.3e-11	42.7	24.9	0.0049	17.8	1.1	4.1	4	0	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|284161205|ref|YP_003399828.1|	-	2.4e-10	40.1	29.8	0.00061	20.1	0.9	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284161205|ref|YP_003399828.1|	-	3.2e-10	40.0	32.1	5.5e-05	23.2	13.7	3.8	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284161205|ref|YP_003399828.1|	-	3.5e-09	37.0	47.1	0.016	16.1	6.0	4.2	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161205|ref|YP_003399828.1|	-	7.2e-08	32.5	32.8	0.0015	18.6	0.9	3.9	2	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284161205|ref|YP_003399828.1|	-	4e-07	30.5	26.6	0.025	15.1	1.2	4.1	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|284161205|ref|YP_003399828.1|	-	6.5e-07	29.4	10.6	6.5e-07	29.4	10.6	2.1	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284161205|ref|YP_003399828.1|	-	3.7e-06	27.6	7.7	0.00015	22.4	0.1	3.9	3	1	1	4	4	4	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|284161205|ref|YP_003399828.1|	-	5.5e-06	26.8	22.1	0.0025	18.3	0.1	4.0	3	1	1	4	4	4	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284161205|ref|YP_003399828.1|	-	3e-05	24.2	26.1	0.046	13.9	1.4	3.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284161205|ref|YP_003399828.1|	-	5.7e-05	23.5	29.3	0.065	13.7	7.2	3.9	2	2	3	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_5	PF12801.7	gi|284161205|ref|YP_003399828.1|	-	0.087	12.8	5.1	2.4	8.2	0.6	3.3	3	0	0	3	3	3	0	4Fe-4S	binding	domain
AFP	PF02420.15	gi|284161205|ref|YP_003399828.1|	-	0.17	12.3	1.2	0.17	12.3	1.2	3.8	4	1	0	4	4	2	0	Insect	antifreeze	protein	repeat
Fer4_22	PF17179.4	gi|284161205|ref|YP_003399828.1|	-	0.17	12.7	31.6	0.31	11.9	1.3	4.1	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
AFOR_N	PF02730.15	gi|284161206|ref|YP_003399829.1|	-	4.1e-62	209.6	0.1	6e-62	209.0	0.1	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
AFOR_C	PF01314.18	gi|284161206|ref|YP_003399829.1|	-	3.5e-58	197.4	0.0	4.9e-58	197.0	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
MarR_2	PF12802.7	gi|284161207|ref|YP_003399830.1|	-	2.6e-10	40.1	0.1	4.6e-10	39.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|284161207|ref|YP_003399830.1|	-	6.6e-10	38.4	0.5	1.6e-09	37.2	0.5	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|284161207|ref|YP_003399830.1|	-	1.6e-08	34.4	0.1	2.9e-08	33.5	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|284161207|ref|YP_003399830.1|	-	3e-07	30.1	0.1	5.5e-07	29.3	0.1	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161207|ref|YP_003399830.1|	-	7.5e-07	28.9	0.5	3.2e-06	26.9	0.4	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|284161207|ref|YP_003399830.1|	-	6.1e-06	26.0	0.1	1.6e-05	24.7	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.19	gi|284161207|ref|YP_003399830.1|	-	1.9e-05	24.8	0.1	3.7e-05	23.8	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_20	PF12840.7	gi|284161207|ref|YP_003399830.1|	-	4.1e-05	23.6	0.5	0.00027	20.9	0.2	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|284161207|ref|YP_003399830.1|	-	0.00033	20.6	0.2	0.00083	19.3	0.2	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.6	gi|284161207|ref|YP_003399830.1|	-	0.00054	20.4	0.1	0.0011	19.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.16	gi|284161207|ref|YP_003399830.1|	-	0.001	19.4	0.1	0.0019	18.6	0.1	1.4	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_CodY	PF08222.11	gi|284161207|ref|YP_003399830.1|	-	0.0014	18.1	0.3	0.003	17.1	0.3	1.6	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
GntR	PF00392.21	gi|284161207|ref|YP_003399830.1|	-	0.0021	17.7	1.9	0.0026	17.4	0.7	1.7	2	0	0	2	2	1	1	Bacterial	regulatory	proteins,	gntR	family
BLACT_WH	PF17778.1	gi|284161207|ref|YP_003399830.1|	-	0.009	16.0	0.1	0.026	14.5	0.1	1.7	1	0	0	1	1	1	1	Beta-lactamase	associated	winged	helix	domain
HTH_DeoR	PF08220.12	gi|284161207|ref|YP_003399830.1|	-	0.011	15.5	0.2	0.022	14.5	0.2	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
SBP_bac_3	PF00497.20	gi|284161207|ref|YP_003399830.1|	-	0.012	15.1	0.0	0.055	12.9	0.0	2.1	1	1	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
DUF2250	PF10007.9	gi|284161207|ref|YP_003399830.1|	-	0.013	15.6	0.1	0.078	13.1	0.1	2.3	2	1	1	3	3	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
NMT1_2	PF13379.6	gi|284161207|ref|YP_003399830.1|	-	0.013	15.2	0.0	0.18	11.5	0.0	2.2	1	1	0	1	1	1	0	NMT1-like	family
TFIIE_alpha	PF02002.17	gi|284161207|ref|YP_003399830.1|	-	0.013	15.3	0.3	0.032	14.1	0.0	1.8	2	0	0	2	2	1	0	TFIIE	alpha	subunit
HTH_10	PF04967.12	gi|284161207|ref|YP_003399830.1|	-	0.029	14.2	0.1	0.086	12.7	0.1	1.7	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HxlR	PF01638.17	gi|284161207|ref|YP_003399830.1|	-	0.031	14.1	0.1	0.16	11.8	0.0	2.0	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
AF0941-like	PF14591.6	gi|284161207|ref|YP_003399830.1|	-	0.036	14.6	1.3	2.2	8.9	0.3	2.9	3	0	0	3	3	3	0	AF0941-like
HTH_36	PF13730.6	gi|284161207|ref|YP_003399830.1|	-	0.046	13.7	0.1	0.17	11.8	0.1	2.0	2	0	0	2	2	1	0	Helix-turn-helix	domain
FaeA	PF04703.12	gi|284161207|ref|YP_003399830.1|	-	0.059	13.7	0.0	0.17	12.3	0.0	1.8	1	0	0	1	1	1	0	FaeA-like	protein
HTH_28	PF13518.6	gi|284161207|ref|YP_003399830.1|	-	0.071	13.2	0.0	0.17	12.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
B-block_TFIIIC	PF04182.12	gi|284161207|ref|YP_003399830.1|	-	0.075	13.2	0.0	0.16	12.1	0.0	1.5	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_AsnC-type	PF13404.6	gi|284161207|ref|YP_003399830.1|	-	0.091	12.6	0.1	0.21	11.4	0.1	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_12	PF08461.10	gi|284161207|ref|YP_003399830.1|	-	0.099	12.6	0.3	20	5.2	0.1	3.4	3	1	0	3	3	3	0	Ribonuclease	R	winged-helix	domain
MerR	PF00376.23	gi|284161207|ref|YP_003399830.1|	-	0.14	12.0	0.1	6.2	6.7	0.1	2.4	2	0	0	2	2	2	0	MerR	family	regulatory	protein
HTH_34	PF13601.6	gi|284161207|ref|YP_003399830.1|	-	0.14	12.3	0.0	0.4	10.9	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|284161207|ref|YP_003399830.1|	-	0.14	12.1	0.0	0.4	10.7	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF3989	PF13150.6	gi|284161208|ref|YP_003399831.1|	-	0.15	11.8	1.7	0.15	11.8	1.3	1.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3989)
SSF	PF00474.17	gi|284161209|ref|YP_003399832.1|	-	7e-26	91.0	35.0	7e-26	91.0	35.0	3.1	2	1	1	3	3	3	1	Sodium:solute	symporter	family
AMMECR1	PF01871.17	gi|284161210|ref|YP_003399833.1|	-	2.6e-52	176.8	0.0	3e-52	176.6	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
ABC_tran	PF00005.27	gi|284161211|ref|YP_003399834.1|	-	3.1e-34	118.4	0.0	4e-34	118.1	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|284161211|ref|YP_003399834.1|	-	7.4e-20	71.2	0.1	1.3e-19	70.5	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_22	PF13401.6	gi|284161211|ref|YP_003399834.1|	-	0.026	14.8	2.0	0.21	11.9	2.0	2.1	1	1	0	1	1	1	0	AAA	domain
DEP	PF00610.21	gi|284161211|ref|YP_003399834.1|	-	0.034	14.2	0.0	0.071	13.2	0.0	1.4	1	0	0	1	1	1	0	Domain	found	in	Dishevelled,	Egl-10,	and	Pleckstrin	(DEP)
AAA_21	PF13304.6	gi|284161211|ref|YP_003399834.1|	-	0.041	13.7	0.4	3.6	7.3	0.1	2.2	1	1	1	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Rad17	PF03215.15	gi|284161211|ref|YP_003399834.1|	-	0.063	13.2	0.0	0.096	12.6	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
ABC_tran	PF00005.27	gi|284161212|ref|YP_003399835.1|	-	1.2e-31	110.0	0.0	1.6e-31	109.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|284161212|ref|YP_003399835.1|	-	3.7e-19	69.0	0.0	6.5e-19	68.2	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|284161212|ref|YP_003399835.1|	-	3.4e-07	29.9	0.4	9.9e-07	28.4	0.4	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|284161212|ref|YP_003399835.1|	-	2e-05	24.6	0.1	0.00077	19.4	0.0	2.1	2	0	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|284161212|ref|YP_003399835.1|	-	0.0022	17.7	0.0	0.0041	16.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|284161212|ref|YP_003399835.1|	-	0.0034	17.8	0.1	0.0054	17.1	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|284161212|ref|YP_003399835.1|	-	0.012	14.8	0.0	0.027	13.6	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
AAA_22	PF13401.6	gi|284161212|ref|YP_003399835.1|	-	0.015	15.6	0.1	0.19	12.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|284161212|ref|YP_003399835.1|	-	0.02	15.3	0.0	0.042	14.2	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
ATPase_2	PF01637.18	gi|284161212|ref|YP_003399835.1|	-	0.023	14.6	1.3	0.84	9.5	1.3	2.2	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|284161212|ref|YP_003399835.1|	-	0.024	14.6	0.0	0.051	13.5	0.0	1.6	1	1	0	1	1	1	0	NACHT	domain
AAA_25	PF13481.6	gi|284161212|ref|YP_003399835.1|	-	0.033	13.8	0.0	0.096	12.3	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|284161212|ref|YP_003399835.1|	-	0.042	14.3	0.2	0.14	12.5	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF87	PF01935.17	gi|284161212|ref|YP_003399835.1|	-	0.054	13.6	0.5	0.22	11.6	0.1	2.0	2	1	0	2	2	2	0	Helicase	HerA,	central	domain
AAA_15	PF13175.6	gi|284161212|ref|YP_003399835.1|	-	0.056	13.2	0.7	0.66	9.6	0.1	2.0	1	1	1	2	2	2	0	AAA	ATPase	domain
PRK	PF00485.18	gi|284161212|ref|YP_003399835.1|	-	0.057	13.2	0.0	0.078	12.7	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
RsgA_GTPase	PF03193.16	gi|284161212|ref|YP_003399835.1|	-	0.064	13.2	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
IstB_IS21	PF01695.17	gi|284161212|ref|YP_003399835.1|	-	0.067	12.9	0.1	0.42	10.3	0.0	2.1	2	1	1	3	3	3	0	IstB-like	ATP	binding	protein
ABC_ATPase	PF09818.9	gi|284161212|ref|YP_003399835.1|	-	0.071	11.9	0.3	0.49	9.1	0.0	2.0	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
ATP-synt_ab	PF00006.25	gi|284161212|ref|YP_003399835.1|	-	0.079	12.6	0.0	0.11	12.1	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
BPD_transp_1	PF00528.22	gi|284161213|ref|YP_003399836.1|	-	1.3e-23	83.7	12.7	1.3e-23	83.7	12.7	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|284161213|ref|YP_003399836.1|	-	5.1e-08	32.8	2.1	5.1e-08	32.8	2.1	3.5	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.22	gi|284161214|ref|YP_003399837.1|	-	4.1e-49	166.8	14.8	4.1e-49	166.8	14.8	2.1	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|284161215|ref|YP_003399838.1|	-	2.3e-97	326.3	3.0	2.8e-97	326.0	3.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
tRNA_NucTransf2	PF09249.11	gi|284161216|ref|YP_003399839.1|	-	2.7e-43	146.8	0.5	1.2e-42	144.7	0.0	2.3	3	0	0	3	3	3	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|284161216|ref|YP_003399839.1|	-	2.9e-17	62.7	0.1	9.8e-17	61.0	0.1	2.0	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
SMODS	PF18144.1	gi|284161216|ref|YP_003399839.1|	-	0.00038	20.7	0.0	0.0012	19.0	0.0	1.8	1	1	0	1	1	1	1	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
Imm51	PF15595.6	gi|284161216|ref|YP_003399839.1|	-	0.08	12.9	0.0	0.7	9.9	0.0	2.4	2	0	0	2	2	2	0	Immunity	protein	51
RBD-FIP	PF09457.10	gi|284161216|ref|YP_003399839.1|	-	0.26	11.2	2.0	8.1	6.4	0.5	2.5	2	0	0	2	2	2	0	FIP	domain
DNA_gyraseB	PF00204.25	gi|284161217|ref|YP_003399840.1|	-	3e-59	199.4	0.2	5.9e-59	198.4	0.2	1.5	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.21	gi|284161217|ref|YP_003399840.1|	-	2.4e-28	98.1	1.7	2.8e-28	97.9	0.4	1.8	2	0	0	2	2	2	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c	PF02518.26	gi|284161217|ref|YP_003399840.1|	-	1.2e-23	83.8	0.0	2.3e-23	82.8	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Toprim	PF01751.22	gi|284161217|ref|YP_003399840.1|	-	1.2e-17	64.0	0.0	3.2e-17	62.7	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
HATPase_c_3	PF13589.6	gi|284161217|ref|YP_003399840.1|	-	0.00019	21.3	0.0	0.00045	20.1	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
ATP_bind_1	PF03029.17	gi|284161218|ref|YP_003399841.1|	-	1e-59	202.2	0.0	1.2e-59	202.1	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
PduV-EutP	PF10662.9	gi|284161218|ref|YP_003399841.1|	-	0.019	14.7	0.0	0.29	10.9	0.0	2.6	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
RsgA_GTPase	PF03193.16	gi|284161218|ref|YP_003399841.1|	-	0.025	14.5	0.0	6.2	6.7	0.0	2.9	3	0	0	3	3	3	0	RsgA	GTPase
MMR_HSR1	PF01926.23	gi|284161218|ref|YP_003399841.1|	-	0.039	14.0	0.0	0.4	10.8	0.0	2.4	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_24	PF13479.6	gi|284161218|ref|YP_003399841.1|	-	0.05	13.3	0.1	0.073	12.8	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|284161218|ref|YP_003399841.1|	-	0.051	13.0	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
TsaE	PF02367.17	gi|284161218|ref|YP_003399841.1|	-	0.072	13.1	0.1	0.19	11.7	0.0	1.7	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_22	PF13401.6	gi|284161218|ref|YP_003399841.1|	-	0.083	13.2	0.0	0.3	11.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
CLP1_P	PF16575.5	gi|284161218|ref|YP_003399841.1|	-	0.13	12.0	0.0	0.84	9.4	0.0	2.2	3	0	0	3	3	3	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_7	PF12775.7	gi|284161218|ref|YP_003399841.1|	-	0.16	11.5	0.0	0.23	11.0	0.0	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_18	PF13238.6	gi|284161218|ref|YP_003399841.1|	-	0.17	12.4	0.0	0.25	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
PBP_like_2	PF12849.7	gi|284161219|ref|YP_003399842.1|	-	1.9e-57	195.1	0.0	2.3e-57	194.9	0.0	1.0	1	0	0	1	1	1	1	PBP	superfamily	domain
SBP_bac_1	PF01547.25	gi|284161219|ref|YP_003399842.1|	-	2.2e-23	83.7	3.1	2.9e-23	83.3	3.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
PBP_like	PF12727.7	gi|284161219|ref|YP_003399842.1|	-	5.8e-06	25.6	0.0	1.4e-05	24.3	0.0	1.8	1	1	0	1	1	1	1	PBP	superfamily	domain
BPD_transp_1	PF00528.22	gi|284161220|ref|YP_003399843.1|	-	1.3e-11	44.6	13.8	1.3e-11	44.6	13.8	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
QCR10	PF09796.9	gi|284161220|ref|YP_003399843.1|	-	0.14	12.3	0.5	0.14	12.3	0.5	3.1	4	0	0	4	4	4	0	Ubiquinol-cytochrome-c	reductase	complex	subunit	(QCR10)
BPD_transp_1	PF00528.22	gi|284161221|ref|YP_003399844.1|	-	2.8e-15	56.5	19.0	2.8e-15	56.5	19.0	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.27	gi|284161222|ref|YP_003399845.1|	-	5.4e-32	111.2	0.0	7.1e-32	110.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161222|ref|YP_003399845.1|	-	1.6e-10	41.3	0.0	9.8e-06	25.6	0.0	2.1	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161222|ref|YP_003399845.1|	-	1.3e-07	31.2	0.1	8e-07	28.7	0.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|284161222|ref|YP_003399845.1|	-	8.5e-06	26.1	0.0	4.3e-05	23.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|284161222|ref|YP_003399845.1|	-	0.00012	21.9	0.0	0.058	13.1	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.6	gi|284161222|ref|YP_003399845.1|	-	0.00016	22.1	0.0	0.00027	21.3	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
PRK	PF00485.18	gi|284161222|ref|YP_003399845.1|	-	0.0011	18.8	0.0	0.0017	18.1	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
RsgA_GTPase	PF03193.16	gi|284161222|ref|YP_003399845.1|	-	0.002	18.1	0.0	0.01	15.7	0.0	2.1	2	0	0	2	2	2	1	RsgA	GTPase
AAA_29	PF13555.6	gi|284161222|ref|YP_003399845.1|	-	0.0033	17.1	0.0	0.0061	16.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.6	gi|284161222|ref|YP_003399845.1|	-	0.0034	17.1	0.0	0.0093	15.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
Rad17	PF03215.15	gi|284161222|ref|YP_003399845.1|	-	0.0058	16.6	0.1	0.0093	15.9	0.1	1.4	1	1	0	1	1	1	1	Rad17	P-loop	domain
ATPase_2	PF01637.18	gi|284161222|ref|YP_003399845.1|	-	0.011	15.6	0.4	0.029	14.3	0.2	2.0	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
TniB	PF05621.11	gi|284161222|ref|YP_003399845.1|	-	0.016	14.6	0.0	0.55	9.6	0.0	2.2	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_23	PF13476.6	gi|284161222|ref|YP_003399845.1|	-	0.018	15.6	0.6	0.036	14.6	0.6	1.8	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|284161222|ref|YP_003399845.1|	-	0.035	14.0	0.0	0.083	12.8	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
AAA_33	PF13671.6	gi|284161222|ref|YP_003399845.1|	-	0.045	13.9	0.0	0.069	13.3	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|284161222|ref|YP_003399845.1|	-	0.053	14.1	0.2	0.1	13.1	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|284161222|ref|YP_003399845.1|	-	0.057	13.8	0.1	0.39	11.2	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|284161222|ref|YP_003399845.1|	-	0.077	12.2	0.2	0.13	11.4	0.2	1.6	1	1	0	1	1	1	0	NB-ARC	domain
AAA_30	PF13604.6	gi|284161222|ref|YP_003399845.1|	-	0.078	12.7	0.0	0.14	11.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|284161222|ref|YP_003399845.1|	-	0.081	13.0	0.0	0.21	11.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|284161222|ref|YP_003399845.1|	-	0.081	13.2	0.0	0.16	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|284161222|ref|YP_003399845.1|	-	0.09	12.5	0.0	1.2	8.9	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|284161222|ref|YP_003399845.1|	-	0.097	12.7	0.0	0.22	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|284161222|ref|YP_003399845.1|	-	0.11	12.9	0.0	0.25	11.8	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_7	PF12775.7	gi|284161222|ref|YP_003399845.1|	-	0.11	11.9	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_25	PF13481.6	gi|284161222|ref|YP_003399845.1|	-	0.12	12.0	0.0	0.41	10.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.9	gi|284161222|ref|YP_003399845.1|	-	0.15	10.8	0.0	2.3	6.9	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
PhoU	PF01895.19	gi|284161223|ref|YP_003399846.1|	-	1.5e-17	63.8	0.8	2.3e-09	37.6	0.2	2.3	2	0	0	2	2	2	2	PhoU	domain
hnRNP_Q_AcD	PF18360.1	gi|284161223|ref|YP_003399846.1|	-	0.18	11.8	1.0	0.69	9.9	0.0	2.3	3	0	0	3	3	3	0	Heterogeneous	nuclear	ribonucleoprotein	Q	acidic	domain
PhoU	PF01895.19	gi|284161224|ref|YP_003399847.1|	-	3e-22	78.9	11.9	4.5e-13	49.5	0.6	2.9	3	1	0	3	3	3	2	PhoU	domain
MazE_antitoxin	PF04014.18	gi|284161224|ref|YP_003399847.1|	-	2.3e-10	40.2	0.0	5.7e-10	38.9	0.0	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Annexin_like	PF18411.1	gi|284161224|ref|YP_003399847.1|	-	0.045	14.0	0.5	2.7	8.3	0.1	2.6	2	1	0	2	2	2	0	Annexin-like	domain
OAM_alpha	PF16552.5	gi|284161224|ref|YP_003399847.1|	-	0.091	12.6	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	D-ornithine	4,5-aminomutase	alpha-subunit
tRNA-synt_1d	PF00750.19	gi|284161225|ref|YP_003399848.1|	-	1.2e-35	123.1	0.4	1.6e-35	122.7	0.4	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|284161225|ref|YP_003399848.1|	-	1.6e-35	121.8	0.1	4.8e-35	120.3	0.1	1.9	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|284161225|ref|YP_003399848.1|	-	2.1e-15	57.0	0.1	8.1e-15	55.2	0.1	2.0	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.18	gi|284161225|ref|YP_003399848.1|	-	1.1e-06	27.8	0.3	0.018	14.0	0.1	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|284161225|ref|YP_003399848.1|	-	4.6e-06	25.6	0.4	0.019	13.7	0.1	3.3	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|284161225|ref|YP_003399848.1|	-	0.0029	17.0	0.1	0.0054	16.1	0.1	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
SopA	PF13981.6	gi|284161225|ref|YP_003399848.1|	-	0.05	14.0	0.0	0.11	12.9	0.0	1.5	1	0	0	1	1	1	0	SopA-like	central	domain
tRNA-synt_1	PF00133.22	gi|284161225|ref|YP_003399848.1|	-	0.12	10.6	0.0	0.2	9.9	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Lactamase_B	PF00753.27	gi|284161226|ref|YP_003399849.1|	-	6.6e-12	45.9	2.2	9.9e-12	45.3	2.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|284161226|ref|YP_003399849.1|	-	0.0022	17.5	0.1	0.0034	16.9	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
bPH_2	PF03703.14	gi|284161227|ref|YP_003399850.1|	-	9.1e-12	45.0	0.1	1.6e-11	44.2	0.1	1.4	1	0	0	1	1	1	1	Bacterial	PH	domain
DUF2070	PF09843.9	gi|284161227|ref|YP_003399850.1|	-	0.15	10.3	6.3	0.19	10.0	6.3	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
E1-E2_ATPase	PF00122.20	gi|284161227|ref|YP_003399850.1|	-	0.36	10.3	4.6	0.5	9.9	3.7	1.7	1	1	0	1	1	1	0	E1-E2	ATPase
UPF0542	PF15086.6	gi|284161227|ref|YP_003399850.1|	-	0.96	9.4	5.0	0.5	10.3	0.3	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0542
Sua5_yciO_yrdC	PF01300.18	gi|284161228|ref|YP_003399851.1|	-	3.9e-56	189.4	0.1	5.3e-56	189.0	0.1	1.2	1	0	0	1	1	1	1	Telomere	recombination
BMC	PF00936.19	gi|284161228|ref|YP_003399851.1|	-	0.053	13.5	0.1	0.15	12.1	0.1	1.7	1	0	0	1	1	1	0	BMC	domain
Pyr_redox_2	PF07992.14	gi|284161229|ref|YP_003399852.1|	-	4.9e-44	150.7	4.2	5.8e-44	150.5	4.2	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161229|ref|YP_003399852.1|	-	4.5e-22	78.4	3.0	1.3e-16	60.9	0.2	2.9	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|284161229|ref|YP_003399852.1|	-	1.9e-06	27.3	3.2	0.00026	20.2	0.1	3.1	3	0	0	3	3	3	1	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|284161229|ref|YP_003399852.1|	-	5e-06	26.0	0.0	1.2e-05	24.8	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|284161229|ref|YP_003399852.1|	-	5.1e-06	26.3	6.6	0.0088	15.7	0.1	3.4	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|284161229|ref|YP_003399852.1|	-	5.2e-05	23.4	0.4	0.0067	16.6	0.0	2.6	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|284161229|ref|YP_003399852.1|	-	5.4e-05	22.4	0.6	0.00024	20.3	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.12	gi|284161229|ref|YP_003399852.1|	-	0.0006	19.0	0.9	0.066	12.3	0.0	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
TrkA_N	PF02254.18	gi|284161229|ref|YP_003399852.1|	-	0.0012	19.1	1.1	1.2	9.4	0.0	2.6	2	0	0	2	2	2	2	TrkA-N	domain
HI0933_like	PF03486.14	gi|284161229|ref|YP_003399852.1|	-	0.0013	17.5	1.0	0.0037	16.0	0.0	2.3	3	0	0	3	3	3	1	HI0933-like	protein
AlaDh_PNT_C	PF01262.21	gi|284161229|ref|YP_003399852.1|	-	0.0026	17.1	1.9	0.28	10.5	0.1	2.5	2	1	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|284161229|ref|YP_003399852.1|	-	0.0036	17.2	0.4	0.012	15.5	0.0	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.19	gi|284161229|ref|YP_003399852.1|	-	0.0041	16.4	1.1	0.021	14.1	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
K_oxygenase	PF13434.6	gi|284161229|ref|YP_003399852.1|	-	0.018	14.2	0.3	0.038	13.1	0.0	1.7	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
IlvN	PF07991.12	gi|284161229|ref|YP_003399852.1|	-	0.049	13.2	0.1	0.13	11.8	0.0	1.8	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
FAD_oxidored	PF12831.7	gi|284161229|ref|YP_003399852.1|	-	0.061	12.7	2.8	0.086	12.2	0.1	2.4	2	1	1	3	3	3	0	FAD	dependent	oxidoreductase
ApbA_C	PF08546.11	gi|284161230|ref|YP_003399853.1|	-	9e-38	129.3	0.2	1.6e-37	128.5	0.2	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.16	gi|284161230|ref|YP_003399853.1|	-	2.2e-26	92.4	0.1	2.1e-25	89.1	0.0	2.1	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.17	gi|284161230|ref|YP_003399853.1|	-	0.051	14.2	0.1	0.13	12.8	0.1	1.8	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
AbiEi_3_N	PF17194.4	gi|284161230|ref|YP_003399853.1|	-	0.074	13.1	0.0	0.2	11.7	0.0	1.8	1	0	0	1	1	1	0	Transcriptional	regulator,	AbiEi	antitoxin	N-terminal	domain
Sm_multidrug_ex	PF06695.11	gi|284161231|ref|YP_003399854.1|	-	3.5e-42	143.9	2.4	4.4e-42	143.6	2.4	1.1	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
MscS_TM	PF12794.7	gi|284161231|ref|YP_003399854.1|	-	0.037	12.9	1.5	0.049	12.5	1.5	1.2	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	inner	membrane	domain	1
Radical_SAM	PF04055.21	gi|284161232|ref|YP_003399855.1|	-	5.8e-20	72.3	0.0	1.6e-18	67.7	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
AP_endonuc_2	PF01261.24	gi|284161232|ref|YP_003399855.1|	-	0.023	14.2	0.0	0.069	12.6	0.0	1.7	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
zf-ribbon_3	PF13248.6	gi|284161232|ref|YP_003399855.1|	-	0.036	13.5	9.1	0.094	12.2	0.1	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
DZR	PF12773.7	gi|284161232|ref|YP_003399855.1|	-	0.12	12.5	0.1	0.12	12.5	0.1	2.5	3	0	0	3	3	3	0	Double	zinc	ribbon
DiS_P_DiS	PF06750.13	gi|284161232|ref|YP_003399855.1|	-	0.17	12.0	0.9	0.28	11.3	0.1	1.8	2	0	0	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
zf-C4_Topoisom	PF01396.19	gi|284161232|ref|YP_003399855.1|	-	0.26	11.1	0.0	0.26	11.1	0.0	3.0	4	0	0	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_2	PF13240.6	gi|284161232|ref|YP_003399855.1|	-	0.32	10.8	10.1	0.48	10.2	0.2	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
DpnI	PF06044.12	gi|284161232|ref|YP_003399855.1|	-	0.45	10.1	0.1	0.45	10.1	0.1	1.7	2	0	0	2	2	2	0	Dam-replacing	family
zf-CCHC_5	PF14787.6	gi|284161232|ref|YP_003399855.1|	-	1.5	8.6	6.2	13	5.6	0.8	3.1	3	0	0	3	3	3	0	GAG-polyprotein	viral	zinc-finger
Phage_integr_3	PF16795.5	gi|284161233|ref|YP_003399856.1|	-	1.3e-44	151.9	0.6	1.3e-44	151.9	0.6	1.8	2	1	1	3	3	3	1	Archaeal	phage	integrase
DUF2828	PF11443.8	gi|284161233|ref|YP_003399856.1|	-	0.04	12.0	0.1	0.38	8.8	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2828)
DUF1160	PF06648.11	gi|284161233|ref|YP_003399856.1|	-	0.12	12.4	0.1	6.7	6.7	0.0	3.0	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1160)
DUF2283	PF10049.9	gi|284161234|ref|YP_003399857.1|	-	1.9e-17	63.2	1.3	2.2e-17	63.0	1.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
THF_DHG_CYH	PF00763.23	gi|284161234|ref|YP_003399857.1|	-	0.07	13.4	0.1	0.072	13.4	0.1	1.1	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
DUF4258	PF14076.6	gi|284161235|ref|YP_003399858.1|	-	1e-12	48.2	0.3	1.3e-12	47.9	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4258)
PBECR3	PF18812.1	gi|284161235|ref|YP_003399858.1|	-	0.00023	21.1	0.2	0.00025	21.0	0.2	1.0	1	0	0	1	1	1	1	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease3
PBECR2	PF18810.1	gi|284161235|ref|YP_003399858.1|	-	0.0029	17.9	0.1	0.0037	17.6	0.1	1.1	1	0	0	1	1	1	1	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease2
BRCA2	PF00634.18	gi|284161235|ref|YP_003399858.1|	-	0.085	12.6	0.2	0.17	11.6	0.2	1.5	1	0	0	1	1	1	0	BRCA2	repeat
HTH_32	PF13565.6	gi|284161236|ref|YP_003399859.1|	-	0.0014	19.1	1.2	0.007	17.0	0.1	2.5	2	2	1	3	3	3	1	Homeodomain-like	domain
HTH_21	PF13276.6	gi|284161236|ref|YP_003399859.1|	-	0.017	15.3	0.1	0.064	13.4	0.1	2.0	1	0	0	1	1	1	0	HTH-like	domain
CcmE	PF03100.15	gi|284161236|ref|YP_003399859.1|	-	0.11	12.4	0.2	0.18	11.8	0.2	1.3	1	0	0	1	1	1	0	CcmE
Linker_histone	PF00538.19	gi|284161236|ref|YP_003399859.1|	-	0.31	11.4	2.5	0.72	10.3	0.5	2.4	1	1	2	3	3	3	0	linker	histone	H1	and	H5	family
Radical_SAM	PF04055.21	gi|284161238|ref|YP_003399861.1|	-	6.3e-05	23.4	0.0	9.8e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284161238|ref|YP_003399861.1|	-	0.0084	16.2	0.9	0.24	11.5	0.7	2.6	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|284161238|ref|YP_003399861.1|	-	0.016	15.5	0.1	0.062	13.6	0.0	2.0	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
HTH_56	PF18662.1	gi|284161238|ref|YP_003399861.1|	-	0.11	12.6	0.1	0.32	11.1	0.1	1.7	1	0	0	1	1	1	0	Cch	helix	turn	helix	domain
NleF_casp_inhib	PF16809.5	gi|284161242|ref|YP_003399865.1|	-	0.073	13.0	0.0	0.11	12.4	0.0	1.2	1	0	0	1	1	1	0	NleF	caspase	inhibitor
CMD	PF02627.20	gi|284161243|ref|YP_003399866.1|	-	0.031	14.3	0.0	0.069	13.2	0.0	1.6	1	0	0	1	1	1	0	Carboxymuconolactone	decarboxylase	family
UMPH-1	PF05822.12	gi|284161243|ref|YP_003399866.1|	-	0.25	10.8	0.8	0.49	9.9	0.8	1.4	1	0	0	1	1	1	0	Pyrimidine	5'-nucleotidase	(UMPH-1)
UvrD-helicase	PF00580.21	gi|284161244|ref|YP_003399867.1|	-	6.3e-19	68.6	0.3	3.2e-11	43.3	0.4	2.6	2	0	0	2	2	2	2	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|284161244|ref|YP_003399867.1|	-	5.4e-17	62.2	0.3	1.5e-12	47.6	0.1	2.2	1	1	1	2	2	2	2	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.6	gi|284161244|ref|YP_003399867.1|	-	8.2e-17	61.9	0.0	3.1e-16	60.0	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
UvrD_C_2	PF13538.6	gi|284161244|ref|YP_003399867.1|	-	3.9e-08	33.0	0.1	1.6e-07	31.0	0.1	2.0	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_30	PF13604.6	gi|284161244|ref|YP_003399867.1|	-	0.00017	21.4	0.0	0.011	15.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|284161244|ref|YP_003399867.1|	-	0.00022	21.1	0.0	0.0005	19.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|284161244|ref|YP_003399867.1|	-	0.002	17.6	0.0	0.29	10.5	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
Viral_helicase1	PF01443.18	gi|284161244|ref|YP_003399867.1|	-	0.0034	17.2	0.0	1.9	8.2	0.0	3.1	3	0	0	3	3	3	1	Viral	(Superfamily	1)	RNA	helicase
mRNA_triPase	PF02940.15	gi|284161244|ref|YP_003399867.1|	-	0.0034	17.1	0.1	0.0066	16.2	0.1	1.3	1	0	0	1	1	1	1	mRNA	capping	enzyme,	beta	chain
AAA_16	PF13191.6	gi|284161244|ref|YP_003399867.1|	-	0.011	16.2	0.0	0.025	15.0	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|284161244|ref|YP_003399867.1|	-	0.018	15.4	0.1	0.33	11.2	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|284161244|ref|YP_003399867.1|	-	0.04	13.6	0.3	0.32	10.7	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
ATPase_2	PF01637.18	gi|284161244|ref|YP_003399867.1|	-	0.096	12.6	1.9	0.37	10.7	0.0	2.7	3	0	0	3	3	3	0	ATPase	domain	predominantly	from	Archaea
NTPase_1	PF03266.15	gi|284161244|ref|YP_003399867.1|	-	0.13	12.2	0.0	0.43	10.5	0.0	1.9	2	0	0	2	2	2	0	NTPase
AAA	PF00004.29	gi|284161244|ref|YP_003399867.1|	-	0.15	12.5	0.3	0.15	12.5	0.3	2.6	3	1	0	3	3	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PRD	PF00874.20	gi|284161244|ref|YP_003399867.1|	-	0.4	11.0	2.7	0.7	10.2	0.3	2.6	3	0	0	3	3	3	0	PRD	domain
Phage_DsbA	PF11126.8	gi|284161245|ref|YP_003399868.1|	-	0.024	14.8	0.0	0.061	13.5	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator	DsbA
Glyco_trans_1_2	PF13524.6	gi|284161245|ref|YP_003399868.1|	-	0.054	13.9	0.1	0.49	10.8	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
RHH_1	PF01402.21	gi|284161247|ref|YP_003399870.1|	-	0.0002	21.1	0.3	0.00026	20.8	0.3	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
HTH_6	PF01418.17	gi|284161247|ref|YP_003399870.1|	-	0.039	13.9	0.1	0.052	13.5	0.1	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
PSK_trans_fac	PF07704.11	gi|284161247|ref|YP_003399870.1|	-	0.075	13.8	0.1	0.091	13.5	0.1	1.2	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
HTH_5	PF01022.20	gi|284161248|ref|YP_003399871.1|	-	2.7e-06	27.2	0.0	5.6e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.7	gi|284161248|ref|YP_003399871.1|	-	1.3e-05	25.0	0.0	2.9e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|284161248|ref|YP_003399871.1|	-	3.3e-05	23.7	0.0	7.2e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|284161248|ref|YP_003399871.1|	-	0.0011	18.8	0.1	0.0029	17.4	0.0	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|284161248|ref|YP_003399871.1|	-	0.0056	17.1	0.0	0.014	15.9	0.0	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Carn_acyltransf	PF00755.20	gi|284161248|ref|YP_003399871.1|	-	0.012	14.3	0.0	0.013	14.2	0.0	1.1	1	0	0	1	1	1	0	Choline/Carnitine	o-acyltransferase
PadR	PF03551.14	gi|284161248|ref|YP_003399871.1|	-	0.019	14.9	0.2	0.08	12.9	0.0	2.1	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
DUF2656	PF10847.8	gi|284161248|ref|YP_003399871.1|	-	0.025	14.7	0.0	0.041	14.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2656)
GerE	PF00196.19	gi|284161248|ref|YP_003399871.1|	-	0.089	12.4	0.0	0.36	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
RP-C	PF03428.13	gi|284161248|ref|YP_003399871.1|	-	0.11	12.1	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
DUF3510	PF12022.8	gi|284161248|ref|YP_003399871.1|	-	0.14	12.5	0.4	0.92	9.9	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3510)
LexA_DNA_bind	PF01726.16	gi|284161248|ref|YP_003399871.1|	-	0.15	11.8	0.1	1.2	9.0	0.0	2.3	2	0	0	2	2	2	0	LexA	DNA	binding	domain
NMD3	PF04981.13	gi|284161249|ref|YP_003399872.1|	-	2.5e-09	36.9	0.1	3.1e-09	36.7	0.1	1.1	1	0	0	1	1	1	1	NMD3	family
DUF603	PF04645.12	gi|284161249|ref|YP_003399872.1|	-	0.0026	17.5	0.2	0.003	17.3	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF603
2OG-Fe_Oxy_2	PF10014.9	gi|284161249|ref|YP_003399872.1|	-	0.15	11.9	0.0	0.15	11.8	0.0	1.0	1	0	0	1	1	1	0	2OG-Fe	dioxygenase
mCpol	PF18182.1	gi|284161250|ref|YP_003399873.1|	-	0.091	13.1	0.1	0.21	11.9	0.1	1.5	1	0	0	1	1	1	0	minimal	CRISPR	polymerase	domain
Phage_integrase	PF00589.22	gi|284161250|ref|YP_003399873.1|	-	0.11	12.3	0.3	0.14	11.9	0.3	1.2	1	0	0	1	1	1	0	Phage	integrase	family
NUMOD1	PF07453.13	gi|284161250|ref|YP_003399873.1|	-	0.11	12.7	0.1	0.35	11.2	0.1	1.9	1	0	0	1	1	1	0	NUMOD1	domain
SpoVIF	PF14069.6	gi|284161250|ref|YP_003399873.1|	-	0.12	12.2	0.7	0.89	9.4	0.1	2.6	3	0	0	3	3	3	0	Stage	VI	sporulation	protein	F
RNA_pol_Rpb6	PF01192.22	gi|284161251|ref|YP_003399874.1|	-	3.5e-13	49.3	0.1	4.6e-13	48.9	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
RNA_pol_N	PF01194.17	gi|284161252|ref|YP_003399875.1|	-	3.5e-25	88.1	0.3	4.2e-25	87.8	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Ribosomal_S9	PF00380.19	gi|284161253|ref|YP_003399876.1|	-	4.5e-34	117.6	1.0	5e-34	117.4	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
SnAC	PF14619.6	gi|284161253|ref|YP_003399876.1|	-	0.012	16.2	1.3	0.019	15.6	1.3	1.4	1	0	0	1	1	1	0	Snf2-ATP	coupling,	chromatin	remodelling	complex
Ribosomal_L13	PF00572.18	gi|284161254|ref|YP_003399877.1|	-	6.6e-13	49.0	0.1	6.5e-11	42.6	0.1	2.2	1	1	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_L18	PF17135.4	gi|284161255|ref|YP_003399878.1|	-	8.5e-15	54.6	0.0	9.3e-15	54.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
Ribosomal_L27A	PF00828.19	gi|284161255|ref|YP_003399878.1|	-	3.5e-10	40.7	0.6	8.9e-10	39.3	0.6	1.8	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Pribosyltran	PF00156.27	gi|284161256|ref|YP_003399879.1|	-	3e-18	65.9	0.8	4e-18	65.4	0.8	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|284161256|ref|YP_003399879.1|	-	0.0068	15.9	0.0	0.0095	15.4	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|284161256|ref|YP_003399879.1|	-	0.015	14.8	0.1	0.026	14.0	0.1	1.3	1	0	0	1	1	1	0	Phosphoribosyl	transferase
ABC_transp_aux	PF09822.9	gi|284161257|ref|YP_003399880.1|	-	0.0021	17.6	0.0	0.0026	17.3	0.0	1.1	1	0	0	1	1	1	1	ABC-type	uncharacterized	transport	system
IlvN	PF07991.12	gi|284161257|ref|YP_003399880.1|	-	0.042	13.4	0.0	0.057	13.0	0.0	1.2	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
PTEN_C2	PF10409.9	gi|284161257|ref|YP_003399880.1|	-	0.077	12.7	0.1	0.1	12.3	0.1	1.3	1	0	0	1	1	1	0	C2	domain	of	PTEN	tumour-suppressor	protein
NYN	PF01936.18	gi|284161257|ref|YP_003399880.1|	-	0.11	13.0	0.1	0.26	11.8	0.0	1.7	2	0	0	2	2	2	0	NYN	domain
IF-2B	PF01008.17	gi|284161258|ref|YP_003399881.1|	-	1.2e-92	310.2	0.3	1.5e-92	309.8	0.3	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DNA_pol3_beta_3	PF02768.15	gi|284161258|ref|YP_003399881.1|	-	0.079	12.8	0.6	8.2	6.3	0.0	2.4	2	0	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	C-terminal	domain
DUF4165	PF13752.6	gi|284161258|ref|YP_003399881.1|	-	0.08	12.9	0.0	0.2	11.6	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4165)
Peroxin-22	PF12827.7	gi|284161258|ref|YP_003399881.1|	-	0.13	12.2	0.0	3.1	7.7	0.0	2.4	2	0	0	2	2	2	0	Peroxisomal	biogenesis	protein	family
DEAD	PF00270.29	gi|284161259|ref|YP_003399882.1|	-	6.9e-32	110.6	0.5	1.2e-30	106.6	0.1	2.5	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|284161259|ref|YP_003399882.1|	-	3e-20	72.6	2.4	3.1e-18	66.1	0.2	3.6	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
DEAD_assoc	PF08494.11	gi|284161259|ref|YP_003399882.1|	-	2.2e-19	70.0	0.0	8.3e-19	68.1	0.0	2.0	1	1	0	1	1	1	1	DEAD/H	associated
ResIII	PF04851.15	gi|284161259|ref|YP_003399882.1|	-	2.7e-09	37.3	0.0	6.2e-09	36.1	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.6	gi|284161259|ref|YP_003399882.1|	-	0.0017	18.6	3.4	0.011	16.0	1.7	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|284161259|ref|YP_003399882.1|	-	0.013	15.9	0.1	0.058	13.7	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
UvrD-helicase	PF00580.21	gi|284161259|ref|YP_003399882.1|	-	0.071	12.6	0.3	0.61	9.5	0.0	2.1	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
DUF4925	PF16272.5	gi|284161259|ref|YP_003399882.1|	-	0.074	12.5	0.1	0.16	11.4	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4925)
AAA_30	PF13604.6	gi|284161259|ref|YP_003399882.1|	-	0.14	11.8	0.0	0.75	9.5	0.0	2.1	1	1	1	2	2	2	0	AAA	domain
TP_methylase	PF00590.20	gi|284161260|ref|YP_003399883.1|	-	6.4e-54	183.1	0.2	1.1e-53	182.4	0.0	1.4	2	0	0	2	2	2	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NAD_kinase	PF01513.21	gi|284161260|ref|YP_003399883.1|	-	0.0058	15.9	0.0	0.0077	15.5	0.0	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
NIR_SIR	PF01077.22	gi|284161261|ref|YP_003399884.1|	-	8.2e-47	158.7	0.1	1.7e-46	157.7	0.1	1.5	2	0	0	2	2	2	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.17	gi|284161261|ref|YP_003399884.1|	-	8.4e-09	35.2	0.0	2.6e-08	33.6	0.0	1.7	2	0	0	2	2	2	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
APO_RNA-bind	PF05634.11	gi|284161261|ref|YP_003399884.1|	-	0.01	15.2	0.2	0.019	14.4	0.2	1.3	1	0	0	1	1	1	0	APO	RNA-binding
Fer4_9	PF13187.6	gi|284161261|ref|YP_003399884.1|	-	0.022	14.9	0.5	0.022	14.9	0.5	2.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284161261|ref|YP_003399884.1|	-	0.035	14.7	0.1	0.035	14.7	0.1	3.1	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_21	PF14697.6	gi|284161261|ref|YP_003399884.1|	-	0.05	13.8	8.7	1.1	9.4	0.8	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161261|ref|YP_003399884.1|	-	0.14	12.8	0.4	0.14	12.8	0.4	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284161261|ref|YP_003399884.1|	-	1.3	9.8	0.0	1.3	9.8	0.0	3.0	3	1	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_10	PF13237.6	gi|284161261|ref|YP_003399884.1|	-	9.7	6.4	12.9	1.3	9.2	0.9	3.2	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
NIR_SIR	PF01077.22	gi|284161262|ref|YP_003399885.1|	-	3.5e-40	137.1	0.0	5e-40	136.6	0.0	1.1	1	0	0	1	1	1	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.17	gi|284161262|ref|YP_003399885.1|	-	1.1e-11	44.3	0.0	2.6e-11	43.2	0.0	1.7	1	0	0	1	1	1	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Fer4	PF00037.27	gi|284161262|ref|YP_003399885.1|	-	2.3e-05	24.0	2.6	2.3e-05	24.0	2.6	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|284161262|ref|YP_003399885.1|	-	0.00016	22.3	2.0	0.0006	20.5	0.0	2.4	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.6	gi|284161262|ref|YP_003399885.1|	-	0.0024	18.0	4.5	0.0024	18.0	4.5	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161262|ref|YP_003399885.1|	-	0.0024	18.4	11.1	0.017	15.7	11.1	2.2	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161262|ref|YP_003399885.1|	-	0.0032	17.6	2.9	0.0032	17.6	2.9	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284161262|ref|YP_003399885.1|	-	0.011	16.2	2.8	0.031	14.7	0.0	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161262|ref|YP_003399885.1|	-	0.011	15.8	1.8	0.011	15.8	1.8	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284161262|ref|YP_003399885.1|	-	0.014	16.0	0.3	0.014	16.0	0.3	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_6	PF12837.7	gi|284161262|ref|YP_003399885.1|	-	0.26	11.4	8.1	1.1	9.5	2.5	3.0	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|284161262|ref|YP_003399885.1|	-	0.52	10.4	7.2	2.1	8.5	2.4	2.8	1	1	1	2	2	2	0	Divergent	4Fe-4S	mono-cluster
DsrD	PF08679.11	gi|284161263|ref|YP_003399886.1|	-	8.2e-13	48.4	0.3	1.1e-12	48.0	0.3	1.2	1	0	0	1	1	1	1	Dissimilatory	sulfite	reductase	D	(DsrD)
SMC_ScpB	PF04079.16	gi|284161263|ref|YP_003399886.1|	-	0.016	14.8	0.1	0.026	14.1	0.1	1.4	1	1	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
SelB-wing_2	PF09106.11	gi|284161263|ref|YP_003399886.1|	-	0.051	13.8	0.1	0.097	12.9	0.1	1.4	1	1	0	1	1	1	0	Elongation	factor	SelB,	winged	helix
Fer4	PF00037.27	gi|284161264|ref|YP_003399887.1|	-	1.8e-13	49.7	21.5	4.4e-07	29.4	6.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284161264|ref|YP_003399887.1|	-	7.5e-09	35.6	16.6	9.1e-09	35.3	16.6	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161264|ref|YP_003399887.1|	-	7.7e-09	35.6	14.1	9.6e-09	35.3	14.1	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161264|ref|YP_003399887.1|	-	1.4e-08	35.2	28.4	1.1e-05	25.9	18.1	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284161264|ref|YP_003399887.1|	-	5.1e-07	29.5	19.6	8.5e-07	28.8	3.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161264|ref|YP_003399887.1|	-	1.4e-05	25.1	15.2	2.8e-05	24.1	15.2	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161264|ref|YP_003399887.1|	-	2.1e-05	24.3	23.1	2.6e-05	24.0	3.4	2.5	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284161264|ref|YP_003399887.1|	-	2.9e-05	24.9	13.1	0.02	15.8	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|284161264|ref|YP_003399887.1|	-	0.00093	20.0	23.4	0.11	13.5	4.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284161264|ref|YP_003399887.1|	-	0.0017	18.8	1.7	0.0017	18.8	1.7	2.0	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|284161264|ref|YP_003399887.1|	-	0.0038	17.6	2.0	0.0038	17.6	2.0	2.5	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|284161264|ref|YP_003399887.1|	-	0.0048	17.6	15.9	0.084	13.6	15.9	2.2	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_19	PF06902.11	gi|284161264|ref|YP_003399887.1|	-	0.023	14.8	8.1	0.029	14.4	8.1	1.1	1	0	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
Fer4_17	PF13534.6	gi|284161264|ref|YP_003399887.1|	-	0.18	12.4	18.7	0.32	11.6	1.9	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284161264|ref|YP_003399887.1|	-	0.3	11.6	18.7	1	9.9	2.7	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284161264|ref|YP_003399887.1|	-	0.83	10.5	12.9	0.24	12.3	1.9	2.1	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|284161264|ref|YP_003399887.1|	-	0.88	9.8	16.2	1.2	9.3	5.7	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
HTH_3	PF01381.22	gi|284161265|ref|YP_003399888.1|	-	9.2e-10	38.4	0.1	3.1e-09	36.8	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.7	gi|284161265|ref|YP_003399888.1|	-	9.8e-09	35.1	0.0	2.8e-08	33.7	0.0	1.9	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|284161265|ref|YP_003399888.1|	-	1.2e-06	28.7	0.0	2.4e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161265|ref|YP_003399888.1|	-	0.0018	17.8	0.0	0.004	16.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF4498	PF14926.6	gi|284161265|ref|YP_003399888.1|	-	0.024	14.0	0.2	0.032	13.6	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4498)
YdaS_antitoxin	PF15943.5	gi|284161265|ref|YP_003399888.1|	-	0.038	13.8	0.0	0.091	12.6	0.0	1.6	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
Phage_CI_repr	PF07022.13	gi|284161265|ref|YP_003399888.1|	-	0.076	13.1	0.0	0.11	12.7	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
MarR_2	PF12802.7	gi|284161265|ref|YP_003399888.1|	-	0.081	12.8	0.0	0.2	11.5	0.0	1.7	1	0	0	1	1	1	0	MarR	family
Sigma70_r4_2	PF08281.12	gi|284161265|ref|YP_003399888.1|	-	0.15	11.7	0.0	0.42	10.3	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
ACP_syn_III_C	PF08541.10	gi|284161266|ref|YP_003399889.1|	-	7.2e-13	48.5	0.0	2.3e-12	46.9	0.0	1.8	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Thiolase_N	PF00108.23	gi|284161266|ref|YP_003399889.1|	-	1.9e-06	27.5	0.0	3.1e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_C	PF08540.10	gi|284161266|ref|YP_003399889.1|	-	4.5e-06	26.5	0.1	1.7e-05	24.6	0.1	1.8	1	1	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.17	gi|284161266|ref|YP_003399889.1|	-	0.00026	20.9	0.1	0.00038	20.4	0.1	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.10	gi|284161266|ref|YP_003399889.1|	-	0.0045	16.8	0.4	0.0045	16.8	0.4	1.9	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.23	gi|284161267|ref|YP_003399890.1|	-	8.1e-20	71.3	1.2	8.1e-20	71.3	1.2	1.7	2	1	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|284161267|ref|YP_003399890.1|	-	3.7e-11	42.7	0.3	1.4e-10	40.9	0.2	2.0	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|284161267|ref|YP_003399890.1|	-	0.0011	18.6	4.8	0.011	15.3	2.4	2.6	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.22	gi|284161267|ref|YP_003399890.1|	-	0.007	16.4	5.5	0.41	10.7	0.1	3.6	4	0	0	4	4	4	2	Beta-ketoacyl	synthase,	C-terminal	domain
PCP	PF02429.15	gi|284161267|ref|YP_003399890.1|	-	0.046	14.1	1.7	0.052	13.9	0.1	1.9	2	0	0	2	2	2	0	Peridinin-chlorophyll	A	binding	protein
Disaggr_repeat	PF06848.11	gi|284161267|ref|YP_003399890.1|	-	0.11	12.2	0.0	0.19	11.4	0.0	1.3	1	0	0	1	1	1	0	Disaggregatase	related	repeat
OB_aCoA_assoc	PF01796.17	gi|284161268|ref|YP_003399891.1|	-	8.2e-18	64.2	0.1	1e-17	63.8	0.1	1.1	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|284161268|ref|YP_003399891.1|	-	1.7e-10	40.6	0.8	2.3e-10	40.1	0.8	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-TFIIB	PF13453.6	gi|284161268|ref|YP_003399891.1|	-	0.023	14.0	0.8	5.3	6.5	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Amidohydro_1	PF01979.20	gi|284161269|ref|YP_003399892.1|	-	1.5e-78	264.5	0.0	1.8e-78	264.3	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|284161269|ref|YP_003399892.1|	-	4.7e-17	62.6	0.0	1.6e-11	44.4	0.0	2.3	2	1	0	2	2	2	2	Amidohydrolase	family
TrkA_N	PF02254.18	gi|284161270|ref|YP_003399893.1|	-	5.7e-53	178.1	8.8	4.7e-27	94.5	0.3	2.6	3	0	0	3	3	2	2	TrkA-N	domain
TrkA_C	PF02080.21	gi|284161270|ref|YP_003399893.1|	-	5.8e-33	112.6	10.2	7.8e-19	67.3	1.4	3.6	3	0	0	3	3	3	2	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|284161270|ref|YP_003399893.1|	-	1.2e-11	45.0	2.8	1.2e-05	25.7	0.1	2.7	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Sacchrp_dh_NADP	PF03435.18	gi|284161270|ref|YP_003399893.1|	-	1.2e-07	32.0	1.7	0.003	17.8	0.1	2.6	2	0	0	2	2	2	2	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_2	PF03446.15	gi|284161270|ref|YP_003399893.1|	-	4.4e-07	30.2	0.7	0.00025	21.2	0.2	2.5	2	0	0	2	2	2	2	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Shikimate_DH	PF01488.20	gi|284161270|ref|YP_003399893.1|	-	5.9e-07	29.6	7.4	0.00041	20.4	0.2	2.9	3	0	0	3	3	3	2	Shikimate	/	quinate	5-dehydrogenase
UDPG_MGDP_dh_N	PF03721.14	gi|284161270|ref|YP_003399893.1|	-	2.7e-06	27.1	2.7	0.00073	19.2	0.4	2.7	2	0	0	2	2	2	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|284161270|ref|YP_003399893.1|	-	3.1e-06	27.2	1.5	0.022	14.7	0.0	2.8	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|284161270|ref|YP_003399893.1|	-	5.5e-06	26.1	0.4	0.021	14.5	0.1	2.5	2	0	0	2	2	2	2	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.6	gi|284161270|ref|YP_003399893.1|	-	2.7e-05	24.2	0.5	0.0095	15.8	0.0	2.4	2	0	0	2	2	2	1	NAD(P)H-binding
AlaDh_PNT_C	PF01262.21	gi|284161270|ref|YP_003399893.1|	-	3.2e-05	23.3	5.4	0.0095	15.3	0.3	2.5	2	1	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Methyltransf_25	PF13649.6	gi|284161270|ref|YP_003399893.1|	-	5.9e-05	23.7	0.1	0.47	11.2	0.0	3.0	2	1	1	3	3	3	2	Methyltransferase	domain
DUF1188	PF06690.11	gi|284161270|ref|YP_003399893.1|	-	0.00011	21.8	2.1	0.029	13.9	0.2	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1188)
F420_oxidored	PF03807.17	gi|284161270|ref|YP_003399893.1|	-	0.00016	22.2	4.5	0.071	13.7	0.5	3.0	3	0	0	3	3	3	2	NADP	oxidoreductase	coenzyme	F420-dependent
XdhC_C	PF13478.6	gi|284161270|ref|YP_003399893.1|	-	0.00017	22.1	0.0	0.098	13.2	0.0	2.4	2	0	0	2	2	2	1	XdhC	Rossmann	domain
NAD_Gly3P_dh_N	PF01210.23	gi|284161270|ref|YP_003399893.1|	-	0.00039	20.4	0.1	0.51	10.3	0.0	2.4	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Gp_dh_N	PF00044.24	gi|284161270|ref|YP_003399893.1|	-	0.00044	20.5	1.1	0.18	12.2	0.2	2.6	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Castor_Poll_mid	PF06241.12	gi|284161270|ref|YP_003399893.1|	-	0.00057	19.8	0.2	1.2	9.1	0.0	2.6	2	0	0	2	2	2	2	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
NmrA	PF05368.13	gi|284161270|ref|YP_003399893.1|	-	0.00078	19.1	6.5	0.13	11.8	0.0	2.8	3	0	0	3	3	3	2	NmrA-like	family
2-Hacid_dh_C	PF02826.19	gi|284161270|ref|YP_003399893.1|	-	0.0031	16.9	0.2	0.31	10.4	0.0	2.4	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Methyltransf_31	PF13847.6	gi|284161270|ref|YP_003399893.1|	-	0.006	16.4	0.2	0.021	14.6	0.2	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Pyr_redox_2	PF07992.14	gi|284161270|ref|YP_003399893.1|	-	0.0071	15.6	2.6	0.46	9.7	0.5	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ADH_zinc_N	PF00107.26	gi|284161270|ref|YP_003399893.1|	-	0.0079	16.2	5.0	5.2	7.1	0.1	4.0	3	2	2	5	5	5	1	Zinc-binding	dehydrogenase
adh_short	PF00106.25	gi|284161270|ref|YP_003399893.1|	-	0.019	14.4	0.4	0.78	9.2	0.1	2.8	3	0	0	3	3	3	0	short	chain	dehydrogenase
Methyltransf_16	PF10294.9	gi|284161270|ref|YP_003399893.1|	-	0.032	14.0	5.5	1.8	8.3	0.1	3.0	3	0	0	3	3	3	0	Lysine	methyltransferase
ThiF	PF00899.21	gi|284161270|ref|YP_003399893.1|	-	0.044	13.1	1.9	3.4	7.0	0.1	2.5	2	0	0	2	2	2	0	ThiF	family
Pyr_redox	PF00070.27	gi|284161270|ref|YP_003399893.1|	-	0.55	10.8	4.2	17	6.0	0.3	3.2	3	1	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TatC	PF00902.18	gi|284161271|ref|YP_003399894.1|	-	5.1e-48	163.6	20.7	6.6e-48	163.3	20.7	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
FeoB_N	PF02421.18	gi|284161273|ref|YP_003399896.1|	-	2.6e-65	218.7	1.1	4.1e-65	218.1	0.2	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|284161273|ref|YP_003399896.1|	-	4.4e-38	130.0	24.8	4.7e-27	94.5	6.1	3.1	3	0	0	3	3	3	2	Nucleoside	recognition
MMR_HSR1	PF01926.23	gi|284161273|ref|YP_003399896.1|	-	6.2e-22	77.8	0.1	1.2e-21	76.9	0.1	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_C	PF07664.12	gi|284161273|ref|YP_003399896.1|	-	1e-15	57.2	1.0	1e-15	57.2	1.0	3.6	4	0	0	4	4	4	1	Ferrous	iron	transport	protein	B	C	terminus
Ras	PF00071.22	gi|284161273|ref|YP_003399896.1|	-	5.1e-06	26.2	0.1	0.0021	17.7	0.1	2.4	2	0	0	2	2	2	2	Ras	family
AIG1	PF04548.16	gi|284161273|ref|YP_003399896.1|	-	2.5e-05	23.7	0.0	4.1e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	AIG1	family
Dynamin_N	PF00350.23	gi|284161273|ref|YP_003399896.1|	-	6.9e-05	23.0	0.6	0.34	10.9	0.0	2.3	2	0	0	2	2	2	2	Dynamin	family
RsgA_GTPase	PF03193.16	gi|284161273|ref|YP_003399896.1|	-	0.00064	19.7	0.1	0.95	9.4	0.0	2.3	2	0	0	2	2	2	2	RsgA	GTPase
Roc	PF08477.13	gi|284161273|ref|YP_003399896.1|	-	0.0021	18.2	0.1	0.0042	17.3	0.1	1.5	1	0	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
SRPRB	PF09439.10	gi|284161273|ref|YP_003399896.1|	-	0.0039	16.7	0.0	0.006	16.0	0.0	1.3	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
TMEM238	PF15125.6	gi|284161273|ref|YP_003399896.1|	-	6	7.1	11.0	2.4	8.4	0.3	3.8	3	0	0	3	3	3	0	TMEM238	protein	family
DUF948	PF06103.11	gi|284161274|ref|YP_003399897.1|	-	0.4	11.0	0.4	0.4	11.0	0.4	2.7	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF4013	PF13197.6	gi|284161274|ref|YP_003399897.1|	-	0.46	10.3	17.9	0.54	10.1	17.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4013)
SHR3_chaperone	PF08229.11	gi|284161275|ref|YP_003399898.1|	-	0.0085	15.1	0.1	0.011	14.7	0.1	1.2	1	0	0	1	1	1	1	ER	membrane	protein	SH3
FeoA	PF04023.14	gi|284161276|ref|YP_003399899.1|	-	2.1e-17	63.1	1.0	2.3e-17	63.0	1.0	1.0	1	0	0	1	1	1	1	FeoA	domain
Fe_dep_repress	PF01325.19	gi|284161277|ref|YP_003399900.1|	-	7.6e-23	80.5	0.0	1.3e-22	79.8	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|284161277|ref|YP_003399900.1|	-	3.9e-20	71.7	0.3	8.3e-20	70.6	0.1	1.7	2	0	0	2	2	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
MarR_2	PF12802.7	gi|284161277|ref|YP_003399900.1|	-	6.4e-09	35.6	0.0	1.1e-08	34.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|284161277|ref|YP_003399900.1|	-	2.3e-06	27.4	0.0	5.3e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|284161277|ref|YP_003399900.1|	-	7.8e-06	25.4	0.0	1.7e-05	24.2	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|284161277|ref|YP_003399900.1|	-	8.7e-06	26.1	0.1	2.1e-05	24.9	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|284161277|ref|YP_003399900.1|	-	2.1e-05	24.3	0.1	0.00049	19.9	0.1	2.3	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|284161277|ref|YP_003399900.1|	-	0.00012	21.9	0.0	0.00025	20.9	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161277|ref|YP_003399900.1|	-	0.00012	21.8	0.0	0.00026	20.8	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.20	gi|284161277|ref|YP_003399900.1|	-	0.00036	20.8	0.0	0.00091	19.5	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator
IF2_N	PF04760.15	gi|284161277|ref|YP_003399900.1|	-	0.00043	20.0	0.0	0.0096	15.7	0.0	2.5	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
LexA_DNA_bind	PF01726.16	gi|284161277|ref|YP_003399900.1|	-	0.0013	18.5	0.0	0.0027	17.4	0.0	1.6	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_45	PF14947.6	gi|284161277|ref|YP_003399900.1|	-	0.0013	18.7	0.0	0.0023	17.9	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_11	PF08279.12	gi|284161277|ref|YP_003399900.1|	-	0.0015	18.4	0.0	0.0035	17.2	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.12	gi|284161277|ref|YP_003399900.1|	-	0.0016	18.1	0.0	0.0034	17.1	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_3	PF01381.22	gi|284161277|ref|YP_003399900.1|	-	0.0029	17.6	0.0	0.013	15.5	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix
HTH_IclR	PF09339.10	gi|284161277|ref|YP_003399900.1|	-	0.0043	16.8	0.0	0.0077	16.0	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.6	gi|284161277|ref|YP_003399900.1|	-	0.005	16.8	0.0	0.0087	16.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|284161277|ref|YP_003399900.1|	-	0.0065	16.2	0.4	0.014	15.2	0.0	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|284161277|ref|YP_003399900.1|	-	0.0086	15.7	0.0	0.022	14.4	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
FeoC	PF09012.10	gi|284161277|ref|YP_003399900.1|	-	0.009	16.1	0.0	0.018	15.1	0.0	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_17	PF12728.7	gi|284161277|ref|YP_003399900.1|	-	0.013	15.7	0.5	0.14	12.4	0.4	2.6	1	1	1	2	2	2	0	Helix-turn-helix	domain
TetR_N	PF00440.23	gi|284161277|ref|YP_003399900.1|	-	0.014	15.1	0.0	0.027	14.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
HTH_40	PF14493.6	gi|284161277|ref|YP_003399900.1|	-	0.014	15.8	0.1	0.039	14.4	0.1	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|284161277|ref|YP_003399900.1|	-	0.016	15.0	0.1	0.12	12.2	0.0	2.4	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_34	PF13601.6	gi|284161277|ref|YP_003399900.1|	-	0.022	14.9	0.1	0.062	13.5	0.1	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_20	PF12840.7	gi|284161277|ref|YP_003399900.1|	-	0.025	14.6	0.0	0.055	13.5	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_10	PF04967.12	gi|284161277|ref|YP_003399900.1|	-	0.026	14.3	0.0	0.078	12.8	0.0	1.8	2	0	0	2	2	1	0	HTH	DNA	binding	domain
Mrr_N	PF14338.6	gi|284161277|ref|YP_003399900.1|	-	0.029	14.5	0.1	0.16	12.1	0.1	2.0	1	1	1	2	2	2	0	Mrr	N-terminal	domain
Topoisom_bac	PF01131.20	gi|284161277|ref|YP_003399900.1|	-	0.033	13.2	0.1	0.049	12.6	0.1	1.2	1	0	0	1	1	1	0	DNA	topoisomerase
GerE	PF00196.19	gi|284161277|ref|YP_003399900.1|	-	0.056	13.0	0.0	0.13	11.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
LacI	PF00356.21	gi|284161277|ref|YP_003399900.1|	-	0.063	13.1	0.0	0.19	11.5	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	lacI	family
HTH_1	PF00126.27	gi|284161277|ref|YP_003399900.1|	-	0.077	13.0	0.0	0.33	10.9	0.0	2.1	1	1	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HipN	PF18253.1	gi|284161277|ref|YP_003399900.1|	-	0.078	12.7	0.1	0.17	11.6	0.1	1.7	1	0	0	1	1	1	0	Hsp70-interacting	protein	N	N-terminal	domain
RuvB_C	PF05491.13	gi|284161277|ref|YP_003399900.1|	-	0.087	12.7	0.1	0.25	11.2	0.1	1.8	1	1	0	1	1	1	0	RuvB	C-terminal	winged	helix	domain
GntR	PF00392.21	gi|284161277|ref|YP_003399900.1|	-	0.1	12.3	0.0	0.2	11.3	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Antimicrobial_7	PF08102.11	gi|284161277|ref|YP_003399900.1|	-	0.12	12.6	0.2	0.64	10.3	0.0	2.2	2	0	0	2	2	2	0	Scorpion	antimicrobial	peptide
HTH_37	PF13744.6	gi|284161277|ref|YP_003399900.1|	-	0.12	12.3	0.0	0.37	10.8	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
POR	PF01558.18	gi|284161277|ref|YP_003399900.1|	-	0.14	12.2	0.0	0.18	11.9	0.0	1.2	1	0	0	1	1	1	0	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
FeoA	PF04023.14	gi|284161278|ref|YP_003399901.1|	-	2.8e-18	65.9	1.7	3.1e-18	65.8	1.7	1.0	1	0	0	1	1	1	1	FeoA	domain
Peptidase_M42	PF05343.14	gi|284161279|ref|YP_003399902.1|	-	9.1e-112	372.8	2.1	1.1e-111	372.6	2.1	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|284161279|ref|YP_003399902.1|	-	1.5e-11	44.4	0.2	2.2e-11	43.9	0.2	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|284161279|ref|YP_003399902.1|	-	0.0039	16.9	0.0	0.027	14.2	0.0	2.0	2	0	0	2	2	2	1	Peptidase	family	M28
PsiE	PF06146.12	gi|284161280|ref|YP_003399903.1|	-	4.2e-13	49.5	9.4	4.2e-13	49.5	9.4	2.1	2	1	1	3	3	3	1	Phosphate-starvation-inducible	E
DUF2207	PF09972.9	gi|284161280|ref|YP_003399903.1|	-	4.4	5.9	6.6	5.1	5.7	6.6	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF2070	PF09843.9	gi|284161280|ref|YP_003399903.1|	-	4.8	5.4	14.8	5.9	5.0	14.8	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
FTR_C	PF02741.15	gi|284161281|ref|YP_003399904.1|	-	1e-58	197.6	0.0	1.4e-58	197.2	0.0	1.2	1	0	0	1	1	1	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|284161281|ref|YP_003399904.1|	-	5.4e-45	152.8	0.0	7.9e-45	152.3	0.0	1.3	1	0	0	1	1	1	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
TP_methylase	PF00590.20	gi|284161282|ref|YP_003399905.1|	-	8.4e-21	74.9	0.0	1.1e-20	74.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
MMR_HSR1_Xtn	PF16897.5	gi|284161283|ref|YP_003399906.1|	-	8e-34	115.9	0.7	1.5e-33	114.9	0.1	1.8	2	0	0	2	2	2	1	C-terminal	region	of	MMR_HSR1	domain
MMR_HSR1	PF01926.23	gi|284161283|ref|YP_003399906.1|	-	1.2e-25	89.8	0.0	2.4e-25	88.8	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|284161283|ref|YP_003399906.1|	-	1e-22	79.9	0.0	2e-22	79.0	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|284161283|ref|YP_003399906.1|	-	3e-15	56.1	0.1	4.4e-14	52.3	0.0	2.3	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|284161283|ref|YP_003399906.1|	-	4.1e-06	27.0	1.8	0.03	14.4	0.0	2.8	3	0	0	3	3	3	2	Dynamin	family
Arf	PF00025.21	gi|284161283|ref|YP_003399906.1|	-	0.00055	19.4	0.3	0.0022	17.5	0.0	2.0	2	2	0	2	2	2	1	ADP-ribosylation	factor	family
RsgA_GTPase	PF03193.16	gi|284161283|ref|YP_003399906.1|	-	0.00056	19.9	0.3	0.033	14.1	0.0	3.0	3	0	0	3	3	3	1	RsgA	GTPase
AIG1	PF04548.16	gi|284161283|ref|YP_003399906.1|	-	0.0047	16.3	0.1	0.0097	15.2	0.0	1.5	2	0	0	2	2	2	1	AIG1	family
GTP_EFTU	PF00009.27	gi|284161283|ref|YP_003399906.1|	-	0.0055	16.3	0.5	1.9	8.0	0.0	3.5	2	1	1	3	3	3	1	Elongation	factor	Tu	GTP	binding	domain
AAA_16	PF13191.6	gi|284161283|ref|YP_003399906.1|	-	0.019	15.3	0.0	0.049	14.0	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
cobW	PF02492.19	gi|284161283|ref|YP_003399906.1|	-	0.025	14.2	1.1	2.5	7.6	0.0	2.9	2	1	1	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
SRPRB	PF09439.10	gi|284161283|ref|YP_003399906.1|	-	0.057	12.8	0.5	0.1	12.0	0.0	1.6	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Roc	PF08477.13	gi|284161283|ref|YP_003399906.1|	-	0.081	13.1	0.1	0.72	10.1	0.0	2.5	2	1	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ATP_bind_1	PF03029.17	gi|284161283|ref|YP_003399906.1|	-	0.09	12.5	0.4	21	4.8	0.0	3.1	3	1	1	4	4	4	0	Conserved	hypothetical	ATP	binding	protein
AAA_29	PF13555.6	gi|284161283|ref|YP_003399906.1|	-	0.097	12.4	0.1	0.28	10.9	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.6	gi|284161283|ref|YP_003399906.1|	-	0.1	12.8	0.0	0.24	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ATF7IP_BD	PF16788.5	gi|284161283|ref|YP_003399906.1|	-	0.37	10.9	2.1	0.59	10.2	2.1	1.2	1	0	0	1	1	1	0	ATF-interacting	protein	binding	domain
Spc24	PF08286.11	gi|284161283|ref|YP_003399906.1|	-	1.7	8.9	4.1	7.8	6.8	0.7	2.7	3	1	0	3	3	2	0	Spc24	subunit	of	Ndc80
G-gamma	PF00631.22	gi|284161283|ref|YP_003399906.1|	-	3.5	7.7	7.3	0.72	9.9	0.8	2.5	3	0	0	3	3	2	0	GGL	domain
Nitroreductase	PF00881.24	gi|284161284|ref|YP_003399907.1|	-	2.4e-40	138.4	0.6	5.6e-22	78.6	0.2	2.0	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|284161284|ref|YP_003399907.1|	-	5.7e-12	45.7	0.0	2.6e-10	40.3	0.0	2.8	1	1	0	1	1	1	1	Putative	TM	nitroreductase
tRNA-Thr_ED	PF08915.11	gi|284161285|ref|YP_003399908.1|	-	3.8e-54	182.5	0.2	7.5e-54	181.5	0.2	1.5	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|284161285|ref|YP_003399908.1|	-	5.8e-23	80.9	3.4	8e-23	80.4	1.5	2.3	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|284161285|ref|YP_003399908.1|	-	2.2e-20	73.4	0.4	4.3e-20	72.4	0.4	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF2884	PF11101.8	gi|284161285|ref|YP_003399908.1|	-	0.053	13.0	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2884)
FDC-SP	PF15215.6	gi|284161285|ref|YP_003399908.1|	-	0.14	12.7	0.0	0.43	11.2	0.0	1.9	1	0	0	1	1	1	0	Follicular	dendritic	cell	secreted	peptide
ABC_tran	PF00005.27	gi|284161287|ref|YP_003399910.1|	-	2.8e-38	131.5	0.0	6.3e-18	65.6	0.0	2.6	2	1	0	2	2	2	2	ABC	transporter
RLI	PF04068.15	gi|284161287|ref|YP_003399910.1|	-	2.3e-13	49.7	4.6	6e-13	48.4	4.6	1.8	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.6	gi|284161287|ref|YP_003399910.1|	-	1.8e-12	47.7	4.7	0.01	15.7	0.1	4.2	3	1	1	4	4	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161287|ref|YP_003399910.1|	-	2.2e-12	46.9	7.1	6.3e-06	25.8	1.1	4.1	2	2	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
Fer4	PF00037.27	gi|284161287|ref|YP_003399910.1|	-	4.9e-08	32.5	3.7	4.9e-08	32.5	3.7	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161287|ref|YP_003399910.1|	-	8.5e-08	32.0	12.8	8.3e-06	25.7	2.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
AAA_15	PF13175.6	gi|284161287|ref|YP_003399910.1|	-	2.1e-05	24.4	0.1	0.027	14.2	0.0	3.2	3	0	0	3	3	3	1	AAA	ATPase	domain
AAA	PF00004.29	gi|284161287|ref|YP_003399910.1|	-	3.8e-05	24.1	0.1	0.0053	17.2	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_10	PF13237.6	gi|284161287|ref|YP_003399910.1|	-	0.00013	22.0	22.9	0.0016	18.5	1.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161287|ref|YP_003399910.1|	-	0.00032	20.8	11.2	0.00055	20.0	11.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161287|ref|YP_003399910.1|	-	0.00042	20.9	21.4	0.002	18.7	1.7	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161287|ref|YP_003399910.1|	-	0.00052	20.1	10.6	0.0011	19.1	10.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161287|ref|YP_003399910.1|	-	0.00095	19.1	1.2	0.00095	19.1	1.2	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_29	PF13555.6	gi|284161287|ref|YP_003399910.1|	-	0.0012	18.5	0.1	1.7	8.4	0.1	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.6	gi|284161287|ref|YP_003399910.1|	-	0.0017	18.6	0.3	2.8	8.1	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|284161287|ref|YP_003399910.1|	-	0.0021	18.3	0.5	2.6	8.3	0.4	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|284161287|ref|YP_003399910.1|	-	0.0021	18.6	1.2	0.58	10.7	0.0	3.1	2	2	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|284161287|ref|YP_003399910.1|	-	0.0038	17.6	0.1	1.5	9.2	0.0	2.7	3	0	0	3	3	2	1	RNA	helicase
AAA_23	PF13476.6	gi|284161287|ref|YP_003399910.1|	-	0.005	17.4	0.0	1.2	9.6	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|284161287|ref|YP_003399910.1|	-	0.005	16.8	0.1	0.47	10.3	0.0	2.3	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA_24	PF13479.6	gi|284161287|ref|YP_003399910.1|	-	0.0052	16.5	0.1	0.62	9.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.23	gi|284161287|ref|YP_003399910.1|	-	0.018	15.1	0.5	2.8	8.1	0.2	2.7	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
SRP54	PF00448.22	gi|284161287|ref|YP_003399910.1|	-	0.024	14.3	0.6	2.1	7.9	0.0	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.6	gi|284161287|ref|YP_003399910.1|	-	0.029	14.7	0.1	3.5	8.0	0.0	2.5	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_30	PF13604.6	gi|284161287|ref|YP_003399910.1|	-	0.03	14.0	1.3	1.1	9.0	0.2	2.5	2	1	0	2	2	2	0	AAA	domain
MeaB	PF03308.16	gi|284161287|ref|YP_003399910.1|	-	0.036	13.1	0.6	2.8	6.9	0.0	2.2	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SbcCD_C	PF13558.6	gi|284161287|ref|YP_003399910.1|	-	0.037	14.2	0.0	15	5.9	0.0	3.1	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Fer4_16	PF13484.6	gi|284161287|ref|YP_003399910.1|	-	0.048	14.6	2.1	0.048	14.6	2.1	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
AAA_7	PF12775.7	gi|284161287|ref|YP_003399910.1|	-	0.068	12.7	0.3	4.1	6.9	0.1	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|284161287|ref|YP_003399910.1|	-	0.11	12.7	0.1	1.3	9.3	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.14	gi|284161287|ref|YP_003399910.1|	-	0.13	12.2	2.2	4.8	7.1	0.1	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CLP1_P	PF16575.5	gi|284161287|ref|YP_003399910.1|	-	0.13	12.0	0.6	4.6	7.0	0.0	2.4	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
dNK	PF01712.19	gi|284161287|ref|YP_003399910.1|	-	0.14	12.0	0.1	16	5.3	0.0	2.5	2	0	0	2	2	2	0	Deoxynucleoside	kinase
Fer4_4	PF12800.7	gi|284161287|ref|YP_003399910.1|	-	0.46	11.1	14.6	0.25	11.9	3.4	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|284161287|ref|YP_003399910.1|	-	0.97	10.5	16.5	0.84	10.7	5.1	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NTPase_1	PF03266.15	gi|284161287|ref|YP_003399910.1|	-	1.4	8.8	4.1	23	4.9	0.5	2.9	2	0	0	2	2	2	0	NTPase
Fer4_8	PF13183.6	gi|284161287|ref|YP_003399910.1|	-	9.7	6.7	9.7	1	9.8	2.2	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NfeD	PF01957.18	gi|284161288|ref|YP_003399911.1|	-	4.3e-15	55.8	3.0	4.3e-15	55.8	3.0	2.4	2	0	0	2	2	2	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.23	gi|284161288|ref|YP_003399911.1|	-	4e-08	33.3	0.5	9.2e-08	32.2	0.5	1.6	1	0	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.16	gi|284161288|ref|YP_003399911.1|	-	0.1	11.5	0.0	0.17	10.9	0.0	1.3	1	0	0	1	1	1	0	Serine	dehydrogenase	proteinase
Sec62	PF03839.16	gi|284161288|ref|YP_003399911.1|	-	1.2	8.6	3.4	2.6	7.5	3.4	1.5	1	0	0	1	1	1	0	Translocation	protein	Sec62
DUF357	PF04010.13	gi|284161289|ref|YP_003399912.1|	-	7.4e-18	64.4	0.0	8.9e-18	64.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
AAA_12	PF13087.6	gi|284161290|ref|YP_003399913.1|	-	2.9e-62	209.8	0.2	4.6e-62	209.2	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.6	gi|284161290|ref|YP_003399913.1|	-	2.8e-51	174.8	0.3	5.8e-50	170.5	0.4	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|284161290|ref|YP_003399913.1|	-	3e-14	53.2	0.2	1.7e-09	37.7	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
AAA_19	PF13245.6	gi|284161290|ref|YP_003399913.1|	-	2.3e-08	34.5	0.0	2.3e-07	31.3	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.18	gi|284161290|ref|YP_003399913.1|	-	3.1e-08	33.7	0.0	0.00023	21.0	0.0	3.2	2	1	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
PIF1	PF05970.14	gi|284161290|ref|YP_003399913.1|	-	1.5e-05	24.3	0.0	0.005	16.0	0.0	2.2	2	0	0	2	2	2	2	PIF1-like	helicase
AAA_22	PF13401.6	gi|284161290|ref|YP_003399913.1|	-	0.00063	20.0	0.1	0.0048	17.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284161290|ref|YP_003399913.1|	-	0.0013	19.1	2.0	0.013	15.8	1.6	2.7	2	1	0	2	2	2	1	AAA	ATPase	domain
Helicase_RecD	PF05127.14	gi|284161290|ref|YP_003399913.1|	-	0.0019	18.1	0.9	0.074	12.9	0.0	2.6	2	0	0	2	2	2	1	Helicase
UvrD-helicase	PF00580.21	gi|284161290|ref|YP_003399913.1|	-	0.0069	15.9	2.8	0.1	12.1	2.4	2.7	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
PhoH	PF02562.16	gi|284161290|ref|YP_003399913.1|	-	0.0095	15.4	0.0	1.7	8.1	0.0	2.6	2	0	0	2	2	2	1	PhoH-like	protein
ResIII	PF04851.15	gi|284161290|ref|YP_003399913.1|	-	0.013	15.5	0.1	0.037	14.0	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
T2SSE	PF00437.20	gi|284161290|ref|YP_003399913.1|	-	0.022	13.8	0.0	0.044	12.8	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
UvrD_C_2	PF13538.6	gi|284161290|ref|YP_003399913.1|	-	0.028	14.3	0.0	0.065	13.1	0.0	1.7	1	0	0	1	1	1	0	UvrD-like	helicase	C-terminal	domain
AAA_34	PF13872.6	gi|284161290|ref|YP_003399913.1|	-	0.05	12.5	0.0	0.26	10.1	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	NTP	hydrolase	pore-1
RuvB_N	PF05496.12	gi|284161290|ref|YP_003399913.1|	-	0.11	12.2	0.1	0.39	10.4	0.0	1.9	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ATPase_2	PF01637.18	gi|284161290|ref|YP_003399913.1|	-	0.15	12.0	0.0	0.15	12.0	0.0	2.4	3	0	0	3	3	3	0	ATPase	domain	predominantly	from	Archaea
Flavi_DEAD	PF07652.14	gi|284161290|ref|YP_003399913.1|	-	0.18	11.8	0.2	0.58	10.1	0.0	1.9	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
Asp_Glu_race	PF01177.22	gi|284161291|ref|YP_003399914.1|	-	7.9e-64	215.6	0.0	8.9e-64	215.4	0.0	1.0	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
Pantoate_transf	PF02548.15	gi|284161291|ref|YP_003399914.1|	-	0.011	15.2	0.0	0.032	13.6	0.0	1.7	2	0	0	2	2	2	0	Ketopantoate	hydroxymethyltransferase
AroM	PF07302.11	gi|284161291|ref|YP_003399914.1|	-	0.17	11.3	0.1	9.2	5.6	0.0	2.3	2	0	0	2	2	2	0	AroM	protein
TPP_enzyme_N	PF02776.18	gi|284161292|ref|YP_003399915.1|	-	2.9e-60	202.8	0.3	2.2e-59	199.9	0.2	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|284161292|ref|YP_003399915.1|	-	1.6e-55	187.1	0.1	1.4e-54	184.0	0.0	2.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|284161292|ref|YP_003399915.1|	-	4.7e-54	181.8	0.1	8.1e-54	181.1	0.1	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.19	gi|284161292|ref|YP_003399915.1|	-	0.045	13.5	0.8	0.093	12.5	0.8	1.5	1	0	0	1	1	1	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
ALS_ss_C	PF10369.9	gi|284161293|ref|YP_003399916.1|	-	3.3e-33	113.7	4.0	3.8e-33	113.5	0.5	2.2	2	0	0	2	2	2	1	Small	subunit	of	acetolactate	synthase
ACT_5	PF13710.6	gi|284161293|ref|YP_003399916.1|	-	1.7e-20	72.6	0.9	1.7e-20	72.6	0.9	1.6	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.25	gi|284161293|ref|YP_003399916.1|	-	3.6e-19	68.2	1.7	4.1e-18	64.9	0.2	2.4	2	1	1	3	3	3	1	ACT	domain
ACT_4	PF13291.6	gi|284161293|ref|YP_003399916.1|	-	2.5e-07	31.2	0.9	5.9e-07	30.0	0.9	1.6	1	0	0	1	1	1	1	ACT	domain
NIL	PF09383.10	gi|284161293|ref|YP_003399916.1|	-	0.0034	17.2	0.1	1	9.3	0.0	2.3	2	0	0	2	2	2	2	NIL	domain
LytR_C	PF13399.6	gi|284161293|ref|YP_003399916.1|	-	0.0043	18.0	0.1	0.0079	17.2	0.1	1.4	1	0	0	1	1	1	1	LytR	cell	envelope-related	transcriptional	attenuator
Saccharop_dh_N	PF04455.12	gi|284161293|ref|YP_003399916.1|	-	0.036	14.5	0.1	0.072	13.5	0.1	1.6	2	0	0	2	2	2	0	LOR/SDH	bifunctional	enzyme	conserved	region
Aminoglyc_resit	PF10706.9	gi|284161293|ref|YP_003399916.1|	-	0.067	12.9	0.0	0.091	12.5	0.0	1.2	1	0	0	1	1	1	0	Aminoglycoside-2''-adenylyltransferase
Acylphosphatase	PF00708.18	gi|284161293|ref|YP_003399916.1|	-	0.095	13.1	0.8	11	6.5	0.3	2.3	2	0	0	2	2	2	0	Acylphosphatase
S6PP_C	PF08472.10	gi|284161293|ref|YP_003399916.1|	-	0.096	12.6	0.0	0.24	11.3	0.0	1.6	1	1	0	2	2	2	0	Sucrose-6-phosphate	phosphohydrolase	C-terminal
M11L	PF11099.8	gi|284161293|ref|YP_003399916.1|	-	0.25	11.6	5.0	4.3	7.6	5.0	2.1	1	1	0	1	1	1	0	Apoptosis	regulator	M11L	like
Radical_SAM	PF04055.21	gi|284161294|ref|YP_003399917.1|	-	6.3e-11	42.9	0.0	1.8e-10	41.4	0.0	1.7	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284161294|ref|YP_003399917.1|	-	0.12	12.7	0.0	0.23	11.7	0.0	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
RuvA_C	PF07499.13	gi|284161294|ref|YP_003399917.1|	-	0.32	11.5	0.9	1.7	9.2	0.1	2.1	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
Spermine_synth	PF01564.17	gi|284161295|ref|YP_003399918.1|	-	1.3e-48	164.9	0.0	1.9e-48	164.4	0.0	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase	domain
Spermine_synt_N	PF17284.2	gi|284161295|ref|YP_003399918.1|	-	2.2e-16	59.5	0.9	4.1e-16	58.6	0.9	1.5	1	0	0	1	1	1	1	Spermidine	synthase	tetramerisation	domain
Methyltransf_25	PF13649.6	gi|284161295|ref|YP_003399918.1|	-	0.00039	21.1	0.0	0.00072	20.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.16	gi|284161295|ref|YP_003399918.1|	-	0.00077	18.8	0.1	0.0013	18.0	0.1	1.4	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
Methyltransf_12	PF08242.12	gi|284161295|ref|YP_003399918.1|	-	0.00081	20.1	0.0	0.0014	19.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|284161295|ref|YP_003399918.1|	-	0.0023	17.1	0.0	0.0037	16.4	0.0	1.4	1	1	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_PK	PF05891.12	gi|284161295|ref|YP_003399918.1|	-	0.14	11.6	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	AdoMet	dependent	proline	di-methyltransferase
RHH_1	PF01402.21	gi|284161296|ref|YP_003399919.1|	-	1.7e-13	50.0	0.2	2.8e-13	49.3	0.2	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.7	gi|284161296|ref|YP_003399919.1|	-	2.5e-11	43.4	0.0	4.7e-11	42.5	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
NikR_C	PF08753.11	gi|284161296|ref|YP_003399919.1|	-	0.00021	21.4	2.4	0.00025	21.2	0.1	2.1	1	1	1	2	2	2	1	NikR	C	terminal	nickel	binding	domain
DnaB_bind	PF10410.9	gi|284161296|ref|YP_003399919.1|	-	0.00069	19.8	0.0	0.0012	18.9	0.0	1.5	1	0	0	1	1	1	1	DnaB-helicase	binding	domain	of	primase
PSK_trans_fac	PF07704.11	gi|284161296|ref|YP_003399919.1|	-	0.0059	17.3	0.1	0.0083	16.9	0.1	1.4	1	0	0	1	1	1	1	Rv0623-like	transcription	factor
RHH_5	PF07878.11	gi|284161296|ref|YP_003399919.1|	-	0.014	15.3	0.1	0.02	14.8	0.1	1.3	1	0	0	1	1	1	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
VapB_antitoxin	PF09957.9	gi|284161296|ref|YP_003399919.1|	-	0.015	15.2	0.3	0.039	13.9	0.0	1.9	2	0	0	2	2	2	0	Bacterial	antitoxin	of	type	II	TA	system,	VapB
GntR	PF00392.21	gi|284161296|ref|YP_003399919.1|	-	0.047	13.4	0.1	0.09	12.4	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HicB_lk_antitox	PF15919.5	gi|284161296|ref|YP_003399919.1|	-	0.15	12.2	0.0	0.27	11.4	0.0	1.4	1	0	0	1	1	1	0	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
HTH_11	PF08279.12	gi|284161296|ref|YP_003399919.1|	-	0.15	12.0	0.1	0.39	10.7	0.1	1.7	1	0	0	1	1	1	0	HTH	domain
ABC-3	PF00950.17	gi|284161297|ref|YP_003399920.1|	-	7e-33	114.2	29.9	7.7e-33	114.1	29.9	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.18	gi|284161297|ref|YP_003399920.1|	-	0.0012	17.9	27.5	0.0016	17.5	27.5	1.2	1	0	0	1	1	1	1	FecCD	transport	family
SID-1_RNA_chan	PF13965.6	gi|284161297|ref|YP_003399920.1|	-	4	5.7	11.8	0.092	11.1	1.4	2.2	1	1	1	2	2	2	0	dsRNA-gated	channel	SID-1
ZnuA	PF01297.17	gi|284161298|ref|YP_003399921.1|	-	1.1e-11	44.7	0.2	1.4e-11	44.3	0.2	1.2	1	0	0	1	1	1	1	Zinc-uptake	complex	component	A	periplasmic
ABC_tran	PF00005.27	gi|284161299|ref|YP_003399922.1|	-	8.4e-29	100.8	0.0	1.1e-28	100.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161299|ref|YP_003399922.1|	-	1.5e-11	44.7	4.1	3.2e-05	23.9	0.6	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|284161299|ref|YP_003399922.1|	-	8.3e-07	29.7	0.2	1.5e-06	28.9	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|284161299|ref|YP_003399922.1|	-	2.7e-06	27.0	0.0	0.0003	20.3	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284161299|ref|YP_003399922.1|	-	0.00011	22.0	0.0	0.0021	17.8	0.0	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|284161299|ref|YP_003399922.1|	-	0.00076	19.2	0.1	0.0015	18.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SSE	PF00437.20	gi|284161299|ref|YP_003399922.1|	-	0.0086	15.2	0.1	0.013	14.6	0.1	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|284161299|ref|YP_003399922.1|	-	0.02	15.1	0.1	0.055	13.8	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.19	gi|284161299|ref|YP_003399922.1|	-	0.024	14.2	0.1	0.043	13.4	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
NACHT	PF05729.12	gi|284161299|ref|YP_003399922.1|	-	0.027	14.4	0.1	0.052	13.5	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_16	PF13191.6	gi|284161299|ref|YP_003399922.1|	-	0.028	14.8	0.0	0.036	14.4	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF3584	PF12128.8	gi|284161299|ref|YP_003399922.1|	-	0.029	11.9	0.1	0.037	11.6	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_27	PF13514.6	gi|284161299|ref|YP_003399922.1|	-	0.039	13.5	0.0	0.06	12.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|284161299|ref|YP_003399922.1|	-	0.067	13.1	0.1	0.12	12.3	0.1	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_19	PF13245.6	gi|284161299|ref|YP_003399922.1|	-	0.11	12.8	0.0	0.23	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|284161299|ref|YP_003399922.1|	-	0.12	12.5	0.0	0.25	11.5	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|284161299|ref|YP_003399922.1|	-	0.13	12.0	0.1	0.24	11.1	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|284161299|ref|YP_003399922.1|	-	0.15	12.5	0.1	0.32	11.4	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.6	gi|284161299|ref|YP_003399922.1|	-	0.21	11.3	0.0	0.35	10.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Peptidase_M24	PF00557.24	gi|284161300|ref|YP_003399923.1|	-	2.3e-42	145.0	0.5	3.2e-42	144.6	0.5	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|284161300|ref|YP_003399923.1|	-	1.7e-06	28.7	0.1	4.2e-06	27.4	0.0	1.7	2	0	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
Lactamase_B	PF00753.27	gi|284161301|ref|YP_003399924.1|	-	3.5e-34	118.5	0.1	4.1e-34	118.3	0.1	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|284161301|ref|YP_003399924.1|	-	4.8e-06	26.2	0.1	1e-05	25.2	0.1	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|284161301|ref|YP_003399924.1|	-	0.033	14.1	0.0	0.051	13.5	0.0	1.4	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
SpoU_methylase	PF00588.19	gi|284161302|ref|YP_003399925.1|	-	7.6e-29	100.7	0.0	1e-28	100.3	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.9	gi|284161302|ref|YP_003399925.1|	-	0.028	14.3	0.0	0.048	13.5	0.0	1.5	1	1	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
HTH_20	PF12840.7	gi|284161304|ref|YP_003399927.1|	-	1.4e-05	25.1	0.1	2.3e-05	24.4	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF742	PF05331.11	gi|284161304|ref|YP_003399927.1|	-	2.2e-05	24.2	0.0	3.4e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF742)
HTH_5	PF01022.20	gi|284161304|ref|YP_003399927.1|	-	3.4e-05	23.6	0.5	6.3e-05	22.8	0.5	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.6	gi|284161304|ref|YP_003399927.1|	-	5.5e-05	23.1	0.3	0.00012	22.0	0.0	1.7	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|284161304|ref|YP_003399927.1|	-	0.00016	21.5	0.1	0.00044	20.1	0.1	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|284161304|ref|YP_003399927.1|	-	0.00019	21.3	0.0	0.00037	20.4	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
MarR_2	PF12802.7	gi|284161304|ref|YP_003399927.1|	-	0.00021	21.1	0.0	0.0003	20.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.19	gi|284161304|ref|YP_003399927.1|	-	0.00027	21.1	0.0	0.00055	20.1	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.6	gi|284161304|ref|YP_003399927.1|	-	0.00056	19.8	0.0	0.0012	18.8	0.0	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161304|ref|YP_003399927.1|	-	0.00084	18.9	0.5	0.0034	16.9	0.5	2.0	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_41	PF14502.6	gi|284161304|ref|YP_003399927.1|	-	0.0039	16.8	0.1	0.018	14.8	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_28	PF13518.6	gi|284161304|ref|YP_003399927.1|	-	0.0094	16.1	0.0	0.042	14.0	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
APG17	PF04108.12	gi|284161304|ref|YP_003399927.1|	-	0.011	14.8	0.1	0.016	14.3	0.1	1.3	1	1	0	1	1	1	0	Autophagy	protein	Apg17
HTH_IclR	PF09339.10	gi|284161304|ref|YP_003399927.1|	-	0.013	15.3	0.0	0.021	14.6	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_29	PF13551.6	gi|284161304|ref|YP_003399927.1|	-	0.026	14.6	0.1	0.065	13.3	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_45	PF14947.6	gi|284161304|ref|YP_003399927.1|	-	0.027	14.4	0.0	0.1	12.6	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
DUF4423	PF14394.6	gi|284161304|ref|YP_003399927.1|	-	0.033	13.9	0.1	0.064	13.0	0.1	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.6	gi|284161304|ref|YP_003399927.1|	-	0.042	14.3	0.0	0.073	13.6	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|284161304|ref|YP_003399927.1|	-	0.043	13.7	0.0	0.075	13.0	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Sigma70_r4	PF04545.16	gi|284161304|ref|YP_003399927.1|	-	0.051	13.1	0.0	0.11	12.1	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
DprA_WH	PF17782.1	gi|284161304|ref|YP_003399927.1|	-	0.054	13.6	0.0	0.092	12.9	0.0	1.4	1	0	0	1	1	1	0	DprA	winged	helix	domain
HTH_40	PF14493.6	gi|284161304|ref|YP_003399927.1|	-	0.06	13.8	0.0	0.66	10.5	0.0	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain
FeoC	PF09012.10	gi|284161304|ref|YP_003399927.1|	-	0.088	12.9	0.0	0.26	11.4	0.0	1.8	1	1	1	2	2	2	0	FeoC	like	transcriptional	regulator
GerE	PF00196.19	gi|284161304|ref|YP_003399927.1|	-	0.092	12.3	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Rrf2	PF02082.20	gi|284161304|ref|YP_003399927.1|	-	0.095	13.1	0.0	0.27	11.6	0.0	1.7	1	1	1	2	2	2	0	Transcriptional	regulator
TFIIE_alpha	PF02002.17	gi|284161304|ref|YP_003399927.1|	-	0.1	12.5	3.6	0.2	11.5	0.6	2.3	1	1	1	2	2	2	0	TFIIE	alpha	subunit
Orthopox_F14	PF06076.12	gi|284161304|ref|YP_003399927.1|	-	0.12	12.7	2.7	0.35	11.2	0.1	2.2	1	1	0	2	2	2	0	Orthopoxvirus	F14	protein
Radical_SAM	PF04055.21	gi|284161305|ref|YP_003399928.1|	-	5.8e-14	52.8	0.3	2.1e-13	51.0	0.3	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Glyco_tran_WecB	PF03808.13	gi|284161305|ref|YP_003399928.1|	-	0.0067	16.4	0.0	0.012	15.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	WecB/TagA/CpsF	family
ATC_hydrolase	PF14196.6	gi|284161305|ref|YP_003399928.1|	-	0.028	15.2	0.1	0.067	14.0	0.1	1.6	1	0	0	1	1	1	0	L-2-amino-thiazoline-4-carboxylic	acid	hydrolase
DUF4037	PF13228.6	gi|284161305|ref|YP_003399928.1|	-	0.053	14.3	0.0	0.16	12.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4037)
BKACE	PF05853.12	gi|284161305|ref|YP_003399928.1|	-	0.065	12.5	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	beta-keto	acid	cleavage	enzyme
Glycos_transf_2	PF00535.26	gi|284161306|ref|YP_003399929.1|	-	3.4e-23	82.3	0.1	5e-23	81.7	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284161306|ref|YP_003399929.1|	-	3.7e-10	40.1	0.0	4.7e-10	39.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|284161306|ref|YP_003399929.1|	-	0.00034	21.1	0.0	0.0006	20.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Phage_holin_3_6	PF07332.11	gi|284161306|ref|YP_003399929.1|	-	0.025	14.6	0.4	0.043	13.8	0.4	1.3	1	0	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
UPF0182	PF03699.13	gi|284161306|ref|YP_003399929.1|	-	0.069	11.3	0.8	0.086	11.0	0.8	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
ResB	PF05140.14	gi|284161306|ref|YP_003399929.1|	-	0.07	11.9	0.0	0.089	11.5	0.0	1.2	1	0	0	1	1	1	0	ResB-like	family
DUF2484	PF10658.9	gi|284161306|ref|YP_003399929.1|	-	0.17	12.2	1.9	0.29	11.5	1.9	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2484)
DUF202	PF02656.15	gi|284161306|ref|YP_003399929.1|	-	4.2	7.9	8.3	0.41	11.1	2.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
Pribosyltran	PF00156.27	gi|284161307|ref|YP_003399930.1|	-	2.4e-21	75.9	0.2	3.6e-21	75.3	0.2	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.6	gi|284161307|ref|YP_003399930.1|	-	7.4e-06	25.6	0.4	0.018	14.5	0.3	2.1	1	1	1	2	2	2	2	Phosphoribosyl	transferase
HTH_7	PF02796.15	gi|284161307|ref|YP_003399930.1|	-	6.1e-05	23.0	0.0	0.00015	21.8	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	resolvase
UPRTase	PF14681.6	gi|284161307|ref|YP_003399930.1|	-	0.001	18.6	0.0	0.0013	18.3	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
HTH_11	PF08279.12	gi|284161307|ref|YP_003399930.1|	-	0.0012	18.8	0.2	0.0024	17.8	0.1	1.6	2	0	0	2	2	2	1	HTH	domain
Sigma70_r4	PF04545.16	gi|284161307|ref|YP_003399930.1|	-	0.0018	17.7	0.0	0.0044	16.5	0.0	1.7	1	1	0	1	1	1	1	Sigma-70,	region	4
HTH_40	PF14493.6	gi|284161307|ref|YP_003399930.1|	-	0.0049	17.3	0.0	0.012	16.1	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|284161307|ref|YP_003399930.1|	-	0.008	15.9	1.2	0.015	15.0	0.1	2.0	3	0	0	3	3	2	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|284161307|ref|YP_003399930.1|	-	0.0096	15.9	0.1	0.02	14.8	0.1	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_23	PF13384.6	gi|284161307|ref|YP_003399930.1|	-	0.017	14.9	0.0	0.037	13.8	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_24	PF13412.6	gi|284161307|ref|YP_003399930.1|	-	0.027	14.0	0.1	0.076	12.6	0.1	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_3	PF01381.22	gi|284161307|ref|YP_003399930.1|	-	0.095	12.8	0.1	0.2	11.7	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix
Sigma70_r4_2	PF08281.12	gi|284161307|ref|YP_003399930.1|	-	0.1	12.3	0.1	0.2	11.4	0.0	1.6	1	1	0	1	1	1	0	Sigma-70,	region	4
DUF2478	PF10649.9	gi|284161307|ref|YP_003399930.1|	-	0.1	12.2	0.2	1.4	8.5	0.1	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2478)
HTH_19	PF12844.7	gi|284161307|ref|YP_003399930.1|	-	0.18	11.8	0.8	0.89	9.6	0.1	2.4	2	1	0	2	2	2	0	Helix-turn-helix	domain
TnsD	PF15978.5	gi|284161307|ref|YP_003399930.1|	-	0.25	10.3	0.2	0.45	9.5	0.1	1.4	2	0	0	2	2	2	0	Tn7-like	transposition	protein	D
PIN_6	PF17146.4	gi|284161308|ref|YP_003399931.1|	-	3.2e-18	66.0	0.3	4.6e-18	65.5	0.3	1.2	1	0	0	1	1	1	1	PIN	domain	of	ribonuclease
PIN_4	PF13638.6	gi|284161308|ref|YP_003399931.1|	-	0.00032	21.0	1.9	0.00062	20.0	1.9	1.5	1	1	0	1	1	1	1	PIN	domain
RecR	PF02132.15	gi|284161308|ref|YP_003399931.1|	-	0.042	13.4	0.3	0.079	12.5	0.3	1.4	1	0	0	1	1	1	0	RecR	protein
DZR	PF12773.7	gi|284161308|ref|YP_003399931.1|	-	0.05	13.6	0.3	0.078	13.0	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
HypA	PF01155.19	gi|284161308|ref|YP_003399931.1|	-	0.054	13.5	2.3	0.17	11.9	2.3	1.7	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Prok-RING_4	PF14447.6	gi|284161308|ref|YP_003399931.1|	-	0.062	13.2	0.4	0.11	12.4	0.4	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	4
RHSP	PF07999.11	gi|284161308|ref|YP_003399931.1|	-	0.072	11.9	0.1	0.088	11.6	0.1	1.1	1	0	0	1	1	1	0	Retrotransposon	hot	spot	protein
NRDD	PF13597.6	gi|284161308|ref|YP_003399931.1|	-	0.092	11.5	2.5	0.14	10.9	0.7	1.8	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
DNA_pol_A_exoN	PF18305.1	gi|284161308|ref|YP_003399931.1|	-	0.12	12.6	0.0	0.22	11.8	0.0	1.4	1	0	0	1	1	1	0	3'	to	5'	exonuclease	C-terminal	domain
DUF2680	PF10925.8	gi|284161309|ref|YP_003399932.1|	-	0.0026	17.7	0.7	0.0037	17.2	0.2	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2680)
DUF4004	PF13171.6	gi|284161309|ref|YP_003399932.1|	-	0.051	13.8	0.0	0.052	13.8	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4004)
ThiI	PF02568.14	gi|284161310|ref|YP_003399933.1|	-	2.7e-66	223.0	0.0	3.4e-66	222.6	0.0	1.1	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.17	gi|284161310|ref|YP_003399933.1|	-	1.7e-24	86.6	2.7	1.7e-24	86.6	2.7	2.3	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.13	gi|284161310|ref|YP_003399933.1|	-	1.7e-07	31.0	0.0	9.2e-07	28.6	0.0	2.0	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|284161310|ref|YP_003399933.1|	-	0.0093	15.7	0.0	0.25	11.1	0.0	2.4	1	1	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|284161310|ref|YP_003399933.1|	-	0.012	14.4	0.0	0.019	13.7	0.0	1.4	1	0	0	1	1	1	0	tRNA	methyl	transferase
Exog_C	PF18026.1	gi|284161310|ref|YP_003399933.1|	-	0.015	15.3	0.1	0.66	10.1	0.0	2.9	3	0	0	3	3	3	0	Endo/exonuclease	(EXOG)	C-terminal	domain
QueH	PF02677.14	gi|284161310|ref|YP_003399933.1|	-	0.037	14.1	0.0	0.061	13.4	0.0	1.3	1	0	0	1	1	1	0	Epoxyqueuosine	reductase	QueH
CBFD_NFYB_HMF	PF00808.23	gi|284161311|ref|YP_003399934.1|	-	8.4e-19	67.6	1.3	9.3e-19	67.5	1.3	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|284161311|ref|YP_003399934.1|	-	4.6e-10	40.0	0.3	5.4e-10	39.7	0.3	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
TFIID-31kDa	PF02291.15	gi|284161311|ref|YP_003399934.1|	-	4.2e-07	30.1	0.1	4.6e-07	29.9	0.1	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
Bromo_TP	PF07524.13	gi|284161311|ref|YP_003399934.1|	-	1.5e-06	28.1	0.0	1.7e-06	27.9	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
CENP-T_C	PF15511.6	gi|284161311|ref|YP_003399934.1|	-	1.8e-06	28.0	0.2	1.8e-06	28.0	0.2	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
CENP-S	PF15630.6	gi|284161311|ref|YP_003399934.1|	-	4.2e-06	27.1	0.1	4.5e-06	27.0	0.1	1.1	1	0	0	1	1	1	1	CENP-S	protein
TFIID-18kDa	PF02269.16	gi|284161311|ref|YP_003399934.1|	-	0.00019	21.4	0.1	0.0002	21.3	0.1	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	18kD	subunit
TFIID_20kDa	PF03847.13	gi|284161311|ref|YP_003399934.1|	-	0.00023	21.6	0.2	0.00026	21.4	0.2	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	TFIID	subunit	A
DUF1931	PF09123.11	gi|284161311|ref|YP_003399934.1|	-	0.012	15.7	1.0	0.013	15.6	1.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1931)
TIP49_C	PF17856.1	gi|284161311|ref|YP_003399934.1|	-	0.022	14.9	0.9	0.65	10.2	0.1	2.0	1	1	1	2	2	2	0	TIP49	AAA-lid	domain
PCP_red	PF08369.10	gi|284161311|ref|YP_003399934.1|	-	0.055	13.7	4.2	0.81	10.0	0.4	2.3	1	1	1	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
DapB_C	PF05173.14	gi|284161312|ref|YP_003399935.1|	-	2e-40	137.6	0.0	3.7e-40	136.7	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.20	gi|284161312|ref|YP_003399935.1|	-	3.3e-36	124.1	0.7	5.1e-36	123.5	0.7	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
3Beta_HSD	PF01073.19	gi|284161312|ref|YP_003399935.1|	-	0.0023	17.0	0.9	0.0033	16.5	0.9	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
CoA_binding	PF02629.19	gi|284161312|ref|YP_003399935.1|	-	0.0038	17.9	2.8	0.008	16.8	2.8	1.5	1	0	0	1	1	1	1	CoA	binding	domain
Semialdhyde_dh	PF01118.24	gi|284161312|ref|YP_003399935.1|	-	0.012	16.0	0.6	0.023	15.1	0.6	1.4	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Gp_dh_N	PF00044.24	gi|284161312|ref|YP_003399935.1|	-	0.033	14.5	2.4	0.14	12.5	1.5	2.7	2	1	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Xan_ur_permease	PF00860.20	gi|284161313|ref|YP_003399936.1|	-	3.7e-38	131.3	41.5	3.7e-38	131.3	41.5	1.8	1	1	0	1	1	1	1	Permease	family
Sulfate_transp	PF00916.20	gi|284161313|ref|YP_003399936.1|	-	6.1e-06	25.2	23.4	9.3e-06	24.6	23.4	1.3	1	0	0	1	1	1	1	Sulfate	permease	family
DUF5464	PF17552.2	gi|284161313|ref|YP_003399936.1|	-	0.4	11.0	0.1	0.4	11.0	0.1	3.4	4	1	0	4	4	4	0	Family	of	unknown	function	(DUF5464)
MFS_MOT1	PF16983.5	gi|284161313|ref|YP_003399936.1|	-	0.79	10.1	29.5	0.54	10.7	7.5	3.9	3	1	1	4	4	4	0	Molybdate	transporter	of	MFS	superfamily
DUF3336	PF11815.8	gi|284161314|ref|YP_003399937.1|	-	0.15	11.8	0.0	0.24	11.1	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3336)
Enolase_C	PF00113.22	gi|284161315|ref|YP_003399938.1|	-	2e-78	263.6	0.6	3e-78	263.1	0.6	1.2	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|284161315|ref|YP_003399938.1|	-	2.8e-35	121.4	0.2	1.2e-34	119.3	0.2	2.0	1	1	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|284161315|ref|YP_003399938.1|	-	5.2e-10	39.3	0.0	7.8e-10	38.7	0.0	1.2	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.11	gi|284161315|ref|YP_003399938.1|	-	0.00023	20.4	0.0	0.00039	19.6	0.0	1.3	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
zf-C2H2_12	PF18658.1	gi|284161315|ref|YP_003399938.1|	-	0.12	11.9	0.0	0.22	11.1	0.0	1.3	1	0	0	1	1	1	0	Zinc-finger	C2H2-type
DUF1848	PF08902.11	gi|284161317|ref|YP_003399940.1|	-	8.3e-06	25.7	7.4	0.00017	21.4	0.0	2.4	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF1848)
Radical_SAM	PF04055.21	gi|284161317|ref|YP_003399940.1|	-	3.9e-05	24.1	0.0	8.7e-05	23.0	0.0	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
Amino_oxidase	PF01593.24	gi|284161318|ref|YP_003399941.1|	-	2e-27	96.6	0.0	2.4e-27	96.4	0.0	1.0	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|284161318|ref|YP_003399941.1|	-	1.2e-07	31.8	0.0	2.5e-07	30.8	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|284161318|ref|YP_003399941.1|	-	0.00081	19.1	0.0	0.0012	18.5	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|284161318|ref|YP_003399941.1|	-	0.039	13.2	0.0	0.078	12.2	0.0	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|284161318|ref|YP_003399941.1|	-	0.14	11.4	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161318|ref|YP_003399941.1|	-	0.15	12.7	1.1	0.29	11.7	0.0	2.1	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|284161318|ref|YP_003399941.1|	-	0.22	10.7	0.0	0.33	10.1	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|284161318|ref|YP_003399941.1|	-	0.25	10.4	0.0	0.34	9.9	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
FeS	PF04060.13	gi|284161319|ref|YP_003399942.1|	-	2.4e-10	39.9	6.6	4.2e-10	39.1	6.6	1.4	1	0	0	1	1	1	1	Putative	Fe-S	cluster
DUF5320	PF17253.2	gi|284161320|ref|YP_003399943.1|	-	1.3e-10	42.2	0.3	1.7e-10	41.9	0.3	1.3	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
BEX	PF04538.12	gi|284161320|ref|YP_003399943.1|	-	0.0037	17.9	0.1	0.0047	17.5	0.1	1.1	1	0	0	1	1	1	1	Brain	expressed	X-linked	like	family
Glyco_hydro_88	PF07470.13	gi|284161320|ref|YP_003399943.1|	-	0.0073	15.4	3.1	0.008	15.3	3.1	1.0	1	0	0	1	1	1	1	Glycosyl	Hydrolase	Family	88
ABC_tran	PF00005.27	gi|284161321|ref|YP_003399944.1|	-	2.1e-34	119.0	0.0	3.3e-34	118.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161321|ref|YP_003399944.1|	-	8.5e-14	52.0	0.6	1.9e-06	27.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161321|ref|YP_003399944.1|	-	5.8e-07	29.2	0.4	0.01	15.3	0.1	2.1	1	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|284161321|ref|YP_003399944.1|	-	3.6e-06	26.6	0.1	7.7e-06	25.6	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|284161321|ref|YP_003399944.1|	-	7.3e-05	23.4	0.8	0.00012	22.7	0.2	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|284161321|ref|YP_003399944.1|	-	0.00012	21.9	0.1	0.00039	20.2	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|284161321|ref|YP_003399944.1|	-	0.00014	22.3	0.1	0.00023	21.6	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
Glyco_trans_4_5	PF16994.5	gi|284161321|ref|YP_003399944.1|	-	0.0011	18.6	0.1	0.0019	17.8	0.1	1.3	1	0	0	1	1	1	1	Glycosyl-transferase	family	4
AAA	PF00004.29	gi|284161321|ref|YP_003399944.1|	-	0.0015	19.0	0.1	0.0075	16.7	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|284161321|ref|YP_003399944.1|	-	0.0016	18.2	0.1	0.065	13.0	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.12	gi|284161321|ref|YP_003399944.1|	-	0.0019	17.5	0.0	0.083	12.2	0.0	2.1	2	0	0	2	2	2	1	Zeta	toxin
AAA_22	PF13401.6	gi|284161321|ref|YP_003399944.1|	-	0.0049	17.1	0.1	0.033	14.5	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|284161321|ref|YP_003399944.1|	-	0.005	16.8	0.5	0.12	12.3	0.1	2.1	2	0	0	2	2	2	1	NTPase
NB-ARC	PF00931.22	gi|284161321|ref|YP_003399944.1|	-	0.008	15.4	0.2	0.38	9.9	0.1	2.1	2	0	0	2	2	2	1	NB-ARC	domain
TniB	PF05621.11	gi|284161321|ref|YP_003399944.1|	-	0.0091	15.4	0.2	1.2	8.5	0.1	2.2	2	0	0	2	2	2	1	Bacterial	TniB	protein
DUF3584	PF12128.8	gi|284161321|ref|YP_003399944.1|	-	0.0099	13.5	0.2	0.014	12.9	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
MMR_HSR1	PF01926.23	gi|284161321|ref|YP_003399944.1|	-	0.012	15.7	0.1	0.039	14.0	0.0	1.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.14	gi|284161321|ref|YP_003399944.1|	-	0.013	15.5	0.1	1.6	8.8	0.0	2.7	2	1	1	3	3	3	0	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.6	gi|284161321|ref|YP_003399944.1|	-	0.017	15.2	0.0	0.37	10.8	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|284161321|ref|YP_003399944.1|	-	0.017	15.5	0.3	0.15	12.4	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
ATPase_2	PF01637.18	gi|284161321|ref|YP_003399944.1|	-	0.018	15.0	0.2	0.056	13.3	0.0	1.8	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
TsaE	PF02367.17	gi|284161321|ref|YP_003399944.1|	-	0.019	14.9	0.1	0.037	14.0	0.1	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_15	PF13175.6	gi|284161321|ref|YP_003399944.1|	-	0.02	14.6	0.0	0.098	12.3	0.0	1.8	1	1	0	2	2	2	0	AAA	ATPase	domain
ABC_ATPase	PF09818.9	gi|284161321|ref|YP_003399944.1|	-	0.022	13.6	0.1	5.1	5.8	0.1	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
RsgA_GTPase	PF03193.16	gi|284161321|ref|YP_003399944.1|	-	0.023	14.6	0.0	0.046	13.6	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
T2SSE	PF00437.20	gi|284161321|ref|YP_003399944.1|	-	0.027	13.5	0.0	0.052	12.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
cobW	PF02492.19	gi|284161321|ref|YP_003399944.1|	-	0.033	13.8	0.1	0.068	12.8	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|284161321|ref|YP_003399944.1|	-	0.039	14.1	0.0	0.11	12.6	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|284161321|ref|YP_003399944.1|	-	0.041	13.5	0.1	0.076	12.6	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|284161321|ref|YP_003399944.1|	-	0.052	13.3	0.0	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|284161321|ref|YP_003399944.1|	-	0.052	13.8	0.2	0.13	12.5	0.1	1.7	2	0	0	2	2	1	0	AAA	domain
NACHT	PF05729.12	gi|284161321|ref|YP_003399944.1|	-	0.053	13.4	0.3	0.12	12.3	0.1	1.6	2	0	0	2	2	2	0	NACHT	domain
AAA_25	PF13481.6	gi|284161321|ref|YP_003399944.1|	-	0.071	12.7	0.1	0.19	11.3	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|284161321|ref|YP_003399944.1|	-	0.076	11.6	0.0	0.15	10.6	0.0	1.4	2	0	0	2	2	2	0	AAA	domain
PIF1	PF05970.14	gi|284161321|ref|YP_003399944.1|	-	0.11	11.7	0.2	1.5	7.9	0.1	2.0	2	0	0	2	2	2	0	PIF1-like	helicase
PRK	PF00485.18	gi|284161321|ref|YP_003399944.1|	-	0.16	11.7	0.0	0.69	9.6	0.0	1.9	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
ABC_tran	PF00005.27	gi|284161322|ref|YP_003399945.1|	-	3.6e-31	108.5	0.0	4.5e-31	108.2	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161322|ref|YP_003399945.1|	-	4.4e-11	43.1	3.0	6.5e-05	22.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
BCA_ABC_TP_C	PF12399.8	gi|284161322|ref|YP_003399945.1|	-	3e-06	27.0	0.1	5.7e-06	26.1	0.1	1.5	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_29	PF13555.6	gi|284161322|ref|YP_003399945.1|	-	0.00012	21.7	0.2	0.00021	20.9	0.2	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|284161322|ref|YP_003399945.1|	-	0.00038	21.0	0.3	0.00063	20.3	0.3	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|284161322|ref|YP_003399945.1|	-	0.0053	16.5	0.6	0.052	13.3	0.6	1.8	1	1	1	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|284161322|ref|YP_003399945.1|	-	0.0067	15.9	2.4	0.18	11.2	0.6	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|284161322|ref|YP_003399945.1|	-	0.014	15.3	0.1	0.023	14.6	0.1	1.3	1	0	0	1	1	1	0	RsgA	GTPase
SbcCD_C	PF13558.6	gi|284161322|ref|YP_003399945.1|	-	0.022	15.0	0.0	0.094	13.0	0.0	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
MMR_HSR1	PF01926.23	gi|284161322|ref|YP_003399945.1|	-	0.024	14.7	0.4	0.041	14.0	0.4	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.6	gi|284161322|ref|YP_003399945.1|	-	0.055	13.2	0.0	0.08	12.7	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|284161322|ref|YP_003399945.1|	-	0.061	12.0	0.0	0.083	11.5	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|284161322|ref|YP_003399945.1|	-	0.075	12.6	0.1	0.11	12.1	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|284161322|ref|YP_003399945.1|	-	0.14	11.8	0.0	0.16	11.6	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_24	PF13479.6	gi|284161322|ref|YP_003399945.1|	-	0.21	11.3	0.2	0.38	10.4	0.2	1.4	1	0	0	1	1	1	0	AAA	domain
Peripla_BP_6	PF13458.6	gi|284161323|ref|YP_003399946.1|	-	9.4e-47	160.3	0.0	1.1e-46	160.2	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.28	gi|284161323|ref|YP_003399946.1|	-	8.3e-18	64.6	0.4	6e-17	61.8	0.4	1.9	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.6	gi|284161323|ref|YP_003399946.1|	-	2.2e-15	56.5	5.5	9.1e-09	34.8	0.1	2.9	2	1	0	2	2	2	2	Periplasmic	binding	protein	domain
Fe-ADH	PF00465.19	gi|284161323|ref|YP_003399946.1|	-	0.0084	15.0	0.1	0.013	14.3	0.1	1.3	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
UPF0180	PF03698.13	gi|284161323|ref|YP_003399946.1|	-	0.11	12.7	2.5	0.24	11.6	0.3	2.8	3	1	0	3	3	3	0	Uncharacterised	protein	family	(UPF0180)
BPD_transp_2	PF02653.16	gi|284161324|ref|YP_003399947.1|	-	1.3e-36	126.2	43.0	1.5e-36	126.0	43.0	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.16	gi|284161325|ref|YP_003399948.1|	-	1.7e-42	145.5	36.9	1.7e-42	145.5	36.9	1.3	1	1	1	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
Trp_syntA	PF00290.20	gi|284161326|ref|YP_003399949.1|	-	1.1e-79	267.0	0.0	1.3e-79	266.7	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|284161326|ref|YP_003399949.1|	-	6e-08	32.4	0.0	1e-07	31.7	0.0	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.17	gi|284161326|ref|YP_003399949.1|	-	0.0027	17.2	1.1	0.0097	15.4	1.1	2.2	1	1	0	1	1	1	1	PcrB	family
Ribul_P_3_epim	PF00834.19	gi|284161326|ref|YP_003399949.1|	-	0.058	12.8	0.1	0.61	9.4	0.0	2.0	1	1	1	2	2	2	0	Ribulose-phosphate	3	epimerase	family
NanE	PF04131.14	gi|284161326|ref|YP_003399949.1|	-	0.072	12.3	0.0	0.11	11.7	0.0	1.3	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
PALP	PF00291.25	gi|284161327|ref|YP_003399950.1|	-	3.9e-49	167.7	0.3	4.6e-49	167.4	0.3	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT_7	PF13840.6	gi|284161328|ref|YP_003399951.1|	-	7.2e-13	48.1	0.1	1.1e-12	47.5	0.1	1.3	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.25	gi|284161328|ref|YP_003399951.1|	-	0.044	13.6	0.1	0.092	12.5	0.1	1.6	1	1	0	1	1	1	0	ACT	domain
SSF	PF00474.17	gi|284161328|ref|YP_003399951.1|	-	0.12	11.2	0.1	0.14	11.0	0.1	1.1	1	0	0	1	1	1	0	Sodium:solute	symporter	family
ACT_7	PF13840.6	gi|284161329|ref|YP_003399952.1|	-	1.1e-18	66.8	0.0	1.6e-18	66.3	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.25	gi|284161329|ref|YP_003399952.1|	-	0.019	14.8	0.0	0.04	13.7	0.0	1.8	1	1	0	1	1	1	0	ACT	domain
PRAI	PF00697.22	gi|284161330|ref|YP_003399953.1|	-	8.6e-31	107.2	0.3	1e-30	107.0	0.3	1.1	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
rhaM	PF05336.13	gi|284161330|ref|YP_003399953.1|	-	0.0071	16.4	0.0	0.012	15.7	0.0	1.3	1	0	0	1	1	1	1	L-rhamnose	mutarotase
OKR_DC_1_N	PF03709.15	gi|284161330|ref|YP_003399953.1|	-	0.016	15.5	0.1	0.032	14.5	0.1	1.5	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
QRPTase_C	PF01729.19	gi|284161330|ref|YP_003399953.1|	-	0.046	13.5	0.7	0.76	9.5	0.0	2.1	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PriA_3primeBD	PF17764.1	gi|284161330|ref|YP_003399953.1|	-	0.051	13.5	0.1	0.081	12.8	0.1	1.3	1	0	0	1	1	1	0	3′	DNA-binding	domain	(3′BD)
Ribul_P_3_epim	PF00834.19	gi|284161330|ref|YP_003399953.1|	-	0.097	12.0	0.5	0.53	9.6	0.4	2.1	1	1	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
GATase	PF00117.28	gi|284161331|ref|YP_003399954.1|	-	4.4e-45	153.8	0.0	5.2e-45	153.6	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|284161331|ref|YP_003399954.1|	-	9.7e-13	48.4	0.1	5.7e-12	45.9	0.1	1.9	1	1	0	1	1	1	1	Peptidase	C26
Chorismate_bind	PF00425.18	gi|284161332|ref|YP_003399955.1|	-	9.5e-92	307.2	0.0	1.8e-91	306.3	0.1	1.4	2	0	0	2	2	2	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|284161332|ref|YP_003399955.1|	-	1.5e-19	70.7	0.3	5.1e-18	65.6	0.1	2.6	2	0	0	2	2	2	1	Anthranilate	synthase	component	I,	N	terminal	region
RE_Bpu10I	PF09549.10	gi|284161332|ref|YP_003399955.1|	-	0.098	12.2	0.2	1.7	8.2	0.3	2.2	2	0	0	2	2	2	0	Bpu10I	restriction	endonuclease
Glycos_transf_3	PF00591.21	gi|284161333|ref|YP_003399956.1|	-	8.5e-77	258.2	0.0	1.1e-76	257.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.17	gi|284161333|ref|YP_003399956.1|	-	3.7e-15	55.5	0.6	1.6e-14	53.4	0.6	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family,	helical	bundle	domain
IGPS	PF00218.21	gi|284161334|ref|YP_003399957.1|	-	6.9e-55	186.0	0.0	8.2e-55	185.7	0.0	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
PDGF_N	PF04692.13	gi|284161334|ref|YP_003399957.1|	-	0.042	14.6	0.0	0.089	13.6	0.0	1.5	1	0	0	1	1	1	0	Platelet-derived	growth	factor,	N	terminal	region
His_biosynth	PF00977.21	gi|284161334|ref|YP_003399957.1|	-	0.089	12.2	0.0	0.48	9.8	0.0	2.1	1	1	1	2	2	2	0	Histidine	biosynthesis	protein
HGTP_anticodon	PF03129.20	gi|284161335|ref|YP_003399958.1|	-	2.8e-26	91.5	0.5	3e-25	88.2	0.0	2.7	3	0	0	3	3	3	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|284161335|ref|YP_003399958.1|	-	3.5e-09	36.9	0.3	1.2e-08	35.1	0.3	2.1	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Nre_N	PF04894.12	gi|284161336|ref|YP_003399959.1|	-	2.3e-94	316.2	0.0	3e-94	315.8	0.0	1.1	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|284161336|ref|YP_003399959.1|	-	2.2e-30	104.8	0.2	3.8e-30	104.1	0.2	1.3	1	0	0	1	1	1	1	Archaeal	Nre,	C-terminal
NTPase_1	PF03266.15	gi|284161337|ref|YP_003399960.1|	-	2.1e-47	161.1	0.2	2.4e-47	161.0	0.2	1.0	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.6	gi|284161337|ref|YP_003399960.1|	-	0.0001	22.6	0.0	0.00026	21.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|284161337|ref|YP_003399960.1|	-	0.002	17.4	0.0	0.0098	15.1	0.0	1.8	2	0	0	2	2	2	1	NB-ARC	domain
AAA	PF00004.29	gi|284161337|ref|YP_003399960.1|	-	0.0021	18.5	0.0	0.0038	17.7	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|284161337|ref|YP_003399960.1|	-	0.0091	16.4	0.0	0.024	15.0	0.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|284161337|ref|YP_003399960.1|	-	0.0092	15.9	0.1	0.58	10.1	0.0	2.1	2	0	0	2	2	2	1	NACHT	domain
AAA_14	PF13173.6	gi|284161337|ref|YP_003399960.1|	-	0.026	14.6	0.1	0.24	11.4	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
ATPase	PF06745.13	gi|284161337|ref|YP_003399960.1|	-	0.027	13.8	0.2	0.08	12.3	0.0	1.8	2	1	0	2	2	2	0	KaiC
AAA_30	PF13604.6	gi|284161337|ref|YP_003399960.1|	-	0.045	13.5	0.2	0.96	9.1	0.1	2.6	1	1	1	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|284161337|ref|YP_003399960.1|	-	0.053	13.2	0.3	0.96	9.1	0.3	2.6	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|284161337|ref|YP_003399960.1|	-	0.064	13.7	0.1	0.46	10.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|284161337|ref|YP_003399960.1|	-	0.082	13.2	0.1	6.1	7.2	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|284161337|ref|YP_003399960.1|	-	0.11	12.7	0.0	0.14	12.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.12	gi|284161337|ref|YP_003399960.1|	-	0.13	12.0	0.1	1.2	8.8	0.0	2.2	1	1	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
MMR_HSR1	PF01926.23	gi|284161337|ref|YP_003399960.1|	-	0.13	12.3	0.0	0.37	10.9	0.0	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.27	gi|284161337|ref|YP_003399960.1|	-	0.2	12.1	0.0	0.34	11.4	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
RNA_helicase	PF00910.22	gi|284161337|ref|YP_003399960.1|	-	0.21	12.0	0.0	1.2	9.6	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
TRM	PF02005.16	gi|284161338|ref|YP_003399961.1|	-	1.1e-104	350.7	0.0	1.2e-104	350.5	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.16	gi|284161338|ref|YP_003399961.1|	-	7.9e-10	38.8	0.1	1.5e-09	37.9	0.1	1.5	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.14	gi|284161338|ref|YP_003399961.1|	-	1.5e-05	24.6	0.0	2.8e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Cons_hypoth95	PF03602.15	gi|284161338|ref|YP_003399961.1|	-	0.00016	21.4	0.0	0.00029	20.5	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Rrf2	PF02082.20	gi|284161338|ref|YP_003399961.1|	-	0.0046	17.3	0.0	0.027	14.8	0.0	2.0	1	1	1	2	2	2	1	Transcriptional	regulator
PrmA	PF06325.13	gi|284161338|ref|YP_003399961.1|	-	0.007	15.8	0.0	0.012	15.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|284161338|ref|YP_003399961.1|	-	0.034	14.8	0.0	0.4	11.4	0.0	2.4	2	0	0	2	2	2	0	Methyltransferase	domain
TFIIE_alpha	PF02002.17	gi|284161338|ref|YP_003399961.1|	-	0.11	12.3	0.5	0.74	9.7	0.1	2.6	3	1	0	3	3	3	0	TFIIE	alpha	subunit
NTP_transf_5	PF14907.6	gi|284161338|ref|YP_003399961.1|	-	0.13	11.9	0.1	0.31	10.6	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	nucleotidyltransferase
Methyltransf_16	PF10294.9	gi|284161338|ref|YP_003399961.1|	-	0.15	11.8	0.0	0.28	10.9	0.0	1.4	1	0	0	1	1	1	0	Lysine	methyltransferase
DUF5350	PF17299.2	gi|284161339|ref|YP_003399962.1|	-	5.1e-26	90.9	5.9	5.6e-26	90.8	5.9	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5350)
YafQ_toxin	PF15738.5	gi|284161340|ref|YP_003399963.1|	-	0.075	13.4	0.6	0.082	13.2	0.6	1.0	1	0	0	1	1	1	0	Bacterial	toxin	of	type	II	toxin-antitoxin	system,	YafQ
Cytadhesin_P30	PF07271.11	gi|284161341|ref|YP_003399964.1|	-	0.31	10.6	0.7	0.29	10.7	0.7	1.0	1	0	0	1	1	1	0	Cytadhesin	P30/P32
tRNA-synt_1g	PF09334.11	gi|284161342|ref|YP_003399965.1|	-	1.5e-154	514.5	0.1	1.9e-154	514.1	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|284161342|ref|YP_003399965.1|	-	4.4e-27	94.0	0.6	8.4e-27	93.1	0.6	1.5	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|284161342|ref|YP_003399965.1|	-	5.7e-21	74.4	0.3	4.1e-11	41.8	0.1	4.0	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.19	gi|284161342|ref|YP_003399965.1|	-	2.6e-15	56.5	5.0	1.5e-10	40.9	0.0	3.1	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
Anticodon_1	PF08264.13	gi|284161342|ref|YP_003399965.1|	-	3.1e-08	33.7	1.3	7.1e-08	32.5	1.3	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1f	PF01921.18	gi|284161342|ref|YP_003399965.1|	-	0.00033	19.7	0.1	3.2	6.6	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(K)
PRONE	PF03759.13	gi|284161342|ref|YP_003399965.1|	-	0.0079	15.1	0.2	0.012	14.4	0.2	1.2	1	0	0	1	1	1	1	PRONE	(Plant-specific	Rop	nucleotide	exchanger)
BBIP10	PF14777.6	gi|284161342|ref|YP_003399965.1|	-	0.04	13.5	1.4	0.11	12.1	1.4	1.7	1	0	0	1	1	1	0	Cilia	BBSome	complex	subunit	10
DZR	PF12773.7	gi|284161342|ref|YP_003399965.1|	-	0.11	12.6	4.7	0.28	11.2	4.8	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|284161342|ref|YP_003399965.1|	-	0.67	9.7	8.3	0.36	10.6	1.9	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2540	PF10802.8	gi|284161342|ref|YP_003399965.1|	-	1.7	8.8	4.6	19	5.4	0.7	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2540)
zf-ribbon_3	PF13248.6	gi|284161342|ref|YP_003399965.1|	-	1.8	8.1	12.8	1.3	8.5	0.7	3.4	2	1	1	3	3	3	0	zinc-ribbon	domain
zf-RING_7	PF02591.15	gi|284161342|ref|YP_003399965.1|	-	2	8.7	4.9	6	7.1	0.0	3.2	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
Paz_1	PF18349.1	gi|284161342|ref|YP_003399965.1|	-	9.5	6.3	7.0	4.5	7.3	0.3	3.4	4	0	0	4	4	4	0	PAZ	domain
ASCH	PF04266.14	gi|284161343|ref|YP_003399966.1|	-	1.1e-13	51.7	1.5	1.7e-13	51.1	0.7	1.7	1	1	1	2	2	2	1	ASCH	domain
Helicase_C	PF00271.31	gi|284161344|ref|YP_003399967.1|	-	2.5e-25	89.0	1.3	7.5e-22	77.8	0.1	3.3	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ERCC4	PF02732.15	gi|284161344|ref|YP_003399967.1|	-	1.8e-24	86.8	0.3	1.6e-23	83.6	0.0	2.3	2	0	0	2	2	2	1	ERCC4	domain
DEAD	PF00270.29	gi|284161344|ref|YP_003399967.1|	-	2.3e-21	76.4	0.1	9e-21	74.4	0.0	2.0	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|284161344|ref|YP_003399967.1|	-	2.3e-17	63.5	0.0	7.7e-17	61.8	0.0	1.9	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.6	gi|284161344|ref|YP_003399967.1|	-	2.6e-15	56.7	0.5	1.7e-13	50.9	0.3	2.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|284161344|ref|YP_003399967.1|	-	7.3e-12	45.2	0.0	1.9e-11	43.9	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|284161344|ref|YP_003399967.1|	-	3.1e-08	33.1	0.1	1.1e-06	28.1	0.1	3.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|284161344|ref|YP_003399967.1|	-	2.4e-07	30.9	0.1	0.001	19.2	0.0	3.4	3	1	1	4	4	4	2	Helix-hairpin-helix	motif
RNA_pol_A_CTD	PF03118.15	gi|284161344|ref|YP_003399967.1|	-	0.003	17.3	0.2	0.012	15.3	0.2	2.1	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
5_3_exonuc	PF01367.20	gi|284161344|ref|YP_003399967.1|	-	0.0032	18.0	0.1	0.42	11.2	0.1	3.2	1	1	1	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_8	PF14716.6	gi|284161344|ref|YP_003399967.1|	-	0.016	15.6	1.3	0.076	13.4	0.1	2.9	3	1	0	3	3	3	0	Helix-hairpin-helix	domain
DUF1759	PF03564.15	gi|284161344|ref|YP_003399967.1|	-	0.079	12.9	0.1	5.4	6.9	0.0	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1759)
MGS	PF02142.22	gi|284161345|ref|YP_003399968.1|	-	2.5e-15	56.4	0.0	3.2e-15	56.1	0.0	1.2	1	0	0	1	1	1	1	MGS-like	domain
Rsbr_N	PF08678.10	gi|284161345|ref|YP_003399968.1|	-	0.038	14.1	0.0	6.4	6.9	0.0	2.1	1	1	1	2	2	2	0	Rsbr	N	terminal
ArsR	PF09824.9	gi|284161346|ref|YP_003399969.1|	-	2.9e-61	205.7	0.7	3.2e-61	205.6	0.7	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
HTH_9	PF08221.11	gi|284161346|ref|YP_003399969.1|	-	0.0091	16.1	0.0	0.56	10.3	0.0	2.5	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
GntR	PF00392.21	gi|284161346|ref|YP_003399969.1|	-	0.061	13.0	0.2	1.3	8.7	0.0	2.6	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
MJ1316	PF04457.12	gi|284161347|ref|YP_003399970.1|	-	9.7e-18	64.7	0.7	1.1e-17	64.5	0.7	1.0	1	0	0	1	1	1	1	MJ1316	RNA	cyclic	group	end	recognition	domain
Lyase_1	PF00206.20	gi|284161348|ref|YP_003399971.1|	-	5.8e-60	203.3	0.0	9.8e-60	202.6	0.0	1.4	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.6	gi|284161348|ref|YP_003399971.1|	-	1e-10	42.2	0.1	4.6e-10	40.1	0.0	2.2	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
PAXIP1_C	PF15364.6	gi|284161348|ref|YP_003399971.1|	-	0.11	12.8	0.0	3.5	7.9	0.0	2.3	2	0	0	2	2	2	0	PAXIP1-associated-protein-1	C	term	PTIP	binding	protein
Prefoldin_2	PF01920.20	gi|284161348|ref|YP_003399971.1|	-	0.25	11.3	1.9	1.6	8.7	0.2	2.4	2	0	0	2	2	2	0	Prefoldin	subunit
Asparaginase	PF00710.20	gi|284161349|ref|YP_003399972.1|	-	3.9e-61	205.9	0.0	6.4e-61	205.2	0.0	1.3	1	0	0	1	1	1	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|284161349|ref|YP_003399972.1|	-	9.2e-26	90.3	0.0	8.3e-25	87.2	0.0	2.2	2	0	0	2	2	2	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|284161349|ref|YP_003399972.1|	-	4.4e-15	54.7	0.1	1.2e-14	53.4	0.1	1.7	1	0	0	1	1	1	1	GatD	N-terminal	domain
Calmodulin_bind	PF07887.11	gi|284161349|ref|YP_003399972.1|	-	0.21	10.9	0.0	0.32	10.3	0.0	1.2	1	0	0	1	1	1	0	Calmodulin	binding	protein-like
Band_7	PF01145.25	gi|284161351|ref|YP_003399974.1|	-	4e-38	131.2	7.4	4e-38	131.2	7.4	1.4	2	0	0	2	2	2	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.6	gi|284161351|ref|YP_003399974.1|	-	5.6e-06	26.2	2.3	2.1e-05	24.3	2.3	1.9	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
OmpH	PF03938.14	gi|284161351|ref|YP_003399974.1|	-	0.0069	16.7	6.9	0.016	15.6	6.9	1.6	1	1	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
SRP54	PF00448.22	gi|284161352|ref|YP_003399975.1|	-	3.5e-73	245.4	0.4	3.5e-73	245.4	0.4	1.7	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|284161352|ref|YP_003399975.1|	-	2.4e-10	40.5	9.5	2.4e-10	40.5	9.5	3.2	4	0	0	4	4	3	1	SRP54-type	protein,	helical	bundle	domain
AAA_17	PF13207.6	gi|284161352|ref|YP_003399975.1|	-	3.8e-07	30.6	0.3	3.8e-07	30.6	0.3	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|284161352|ref|YP_003399975.1|	-	4.7e-05	23.6	0.0	0.00018	21.7	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|284161352|ref|YP_003399975.1|	-	0.00013	21.3	0.1	0.00013	21.3	0.1	2.0	2	0	0	2	2	2	1	Zeta	toxin
ResIII	PF04851.15	gi|284161352|ref|YP_003399975.1|	-	0.0004	20.4	0.1	0.0004	20.4	0.1	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.6	gi|284161352|ref|YP_003399975.1|	-	0.00041	20.8	0.2	0.0012	19.3	0.1	1.8	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_30	PF13604.6	gi|284161352|ref|YP_003399975.1|	-	0.0005	19.8	0.7	0.0005	19.8	0.7	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|284161352|ref|YP_003399975.1|	-	0.0005	20.3	0.3	0.0014	18.9	0.1	2.0	2	1	0	2	2	1	1	AAA	domain
AAA	PF00004.29	gi|284161352|ref|YP_003399975.1|	-	0.0009	19.7	0.6	0.0009	19.7	0.6	2.8	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.17	gi|284161352|ref|YP_003399975.1|	-	0.00096	18.9	5.9	0.0058	16.3	0.1	3.3	4	0	0	4	4	4	1	Thymidylate	kinase
APS_kinase	PF01583.20	gi|284161352|ref|YP_003399975.1|	-	0.0018	18.2	0.0	0.0042	17.0	0.0	1.6	1	0	0	1	1	1	1	Adenylylsulphate	kinase
DUF2075	PF09848.9	gi|284161352|ref|YP_003399975.1|	-	0.0022	17.3	0.2	0.0022	17.3	0.2	1.8	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_19	PF13245.6	gi|284161352|ref|YP_003399975.1|	-	0.0041	17.5	0.2	0.0041	17.5	0.2	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|284161352|ref|YP_003399975.1|	-	0.0074	16.6	3.4	0.015	15.6	0.1	2.4	2	2	0	2	2	2	1	AAA	domain
Fe-ADH	PF00465.19	gi|284161352|ref|YP_003399975.1|	-	0.0093	14.8	1.8	0.71	8.6	0.1	2.9	1	1	2	3	3	3	1	Iron-containing	alcohol	dehydrogenase
VirC1	PF07015.11	gi|284161352|ref|YP_003399975.1|	-	0.014	14.7	0.0	0.024	13.9	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
AAA_24	PF13479.6	gi|284161352|ref|YP_003399975.1|	-	0.026	14.3	0.1	0.062	13.0	0.1	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|284161352|ref|YP_003399975.1|	-	0.049	13.1	0.0	0.098	12.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
CbiA	PF01656.23	gi|284161352|ref|YP_003399975.1|	-	0.05	13.7	0.4	0.05	13.7	0.4	2.5	2	2	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.27	gi|284161352|ref|YP_003399975.1|	-	0.054	14.0	1.0	0.42	11.1	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
DUF853	PF05872.12	gi|284161352|ref|YP_003399975.1|	-	0.062	11.9	2.8	0.45	9.1	0.1	2.8	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF853)
AAA_18	PF13238.6	gi|284161352|ref|YP_003399975.1|	-	0.19	12.2	0.1	0.19	12.2	0.1	2.4	2	2	0	2	2	2	0	AAA	domain
PRORP	PF16953.5	gi|284161352|ref|YP_003399975.1|	-	0.2	11.1	1.8	0.39	10.2	1.8	1.5	1	0	0	1	1	1	0	Protein-only	RNase	P
MobB	PF03205.14	gi|284161352|ref|YP_003399975.1|	-	0.22	11.4	0.1	0.22	11.4	0.1	2.8	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.23	gi|284161352|ref|YP_003399975.1|	-	0.58	10.3	7.3	0.098	12.8	0.9	2.8	2	2	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF3160	PF11369.8	gi|284161352|ref|YP_003399975.1|	-	0.66	8.4	3.9	0.91	7.9	3.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3160)
Med2	PF11214.8	gi|284161352|ref|YP_003399975.1|	-	1.9	8.7	8.6	11	6.3	2.1	3.3	3	0	0	3	3	3	0	Mediator	complex	subunit	2
PTPlike_phytase	PF14566.6	gi|284161352|ref|YP_003399975.1|	-	8.4	6.5	8.9	6.8	6.8	0.0	2.7	2	1	1	3	3	3	0	Inositol	hexakisphosphate
Prefoldin	PF02996.17	gi|284161353|ref|YP_003399976.1|	-	2.2e-24	85.7	8.3	2.8e-24	85.3	8.3	1.1	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.20	gi|284161353|ref|YP_003399976.1|	-	3.7e-05	23.6	15.1	0.0048	16.8	7.0	2.3	1	1	1	2	2	2	2	Prefoldin	subunit
XPC-binding	PF09280.11	gi|284161353|ref|YP_003399976.1|	-	0.043	13.6	0.5	0.043	13.6	0.5	2.1	2	0	0	2	2	2	0	XPC-binding	domain
Helo_like_N	PF17111.5	gi|284161353|ref|YP_003399976.1|	-	0.079	12.3	6.8	0.4	10.0	6.8	2.0	1	1	0	1	1	1	0	Fungal	N-terminal	domain	of	STAND	proteins
RecG_N	PF17190.4	gi|284161353|ref|YP_003399976.1|	-	0.37	11.6	8.7	0.89	10.3	1.2	2.2	2	0	0	2	2	2	0	RecG	N-terminal	helical	domain
APG6_N	PF17675.1	gi|284161353|ref|YP_003399976.1|	-	0.43	11.1	17.1	2.1	8.9	4.5	2.1	2	0	0	2	2	2	0	Apg6	coiled-coil	region
DUF4094	PF13334.6	gi|284161353|ref|YP_003399976.1|	-	0.47	10.9	6.0	2.9	8.3	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4094)
PspB	PF06667.12	gi|284161353|ref|YP_003399976.1|	-	0.59	10.2	4.1	5.1	7.2	1.7	2.5	2	1	0	2	2	2	0	Phage	shock	protein	B
DUF1664	PF07889.12	gi|284161353|ref|YP_003399976.1|	-	0.91	9.6	8.5	1.9	8.5	2.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF1818	PF08848.11	gi|284161353|ref|YP_003399976.1|	-	2	8.5	9.3	2.5	8.2	1.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1818)
Spc7	PF08317.11	gi|284161353|ref|YP_003399976.1|	-	3.8	6.3	14.1	4.3	6.1	5.4	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
Ribosomal_L18A	PF01775.17	gi|284161354|ref|YP_003399977.1|	-	3.8e-10	39.9	0.1	3.9e-10	39.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
Acyl_transf_2	PF02273.15	gi|284161354|ref|YP_003399977.1|	-	0.038	13.2	0.0	0.038	13.2	0.0	1.0	1	0	0	1	1	1	0	Acyl	transferase
eIF-6	PF01912.18	gi|284161355|ref|YP_003399978.1|	-	8.3e-65	217.9	10.4	9.6e-65	217.7	10.4	1.0	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L31e	PF01198.19	gi|284161356|ref|YP_003399979.1|	-	1e-11	44.9	0.9	1.9e-11	44.0	0.9	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L31e
YukC	PF10140.9	gi|284161356|ref|YP_003399979.1|	-	0.043	12.6	0.1	0.056	12.3	0.1	1.1	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukC
Ribosomal_L39	PF00832.20	gi|284161357|ref|YP_003399980.1|	-	3e-17	61.9	13.3	3.5e-17	61.7	13.3	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
dsDNA_bind	PF01984.20	gi|284161358|ref|YP_003399981.1|	-	3.5e-25	88.4	16.3	4.2e-25	88.2	16.3	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Radial_spoke_3	PF06098.11	gi|284161358|ref|YP_003399981.1|	-	0.0023	17.3	10.4	0.0025	17.1	10.4	1.0	1	0	0	1	1	1	1	Radial	spoke	protein	3
DUF4355	PF14265.6	gi|284161358|ref|YP_003399981.1|	-	1.9	8.7	12.1	2.6	8.3	12.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
Ribosomal_S19e	PF01090.19	gi|284161359|ref|YP_003399982.1|	-	2.2e-60	202.3	0.1	2.5e-60	202.1	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
RuvB_C	PF05491.13	gi|284161359|ref|YP_003399982.1|	-	0.00029	20.6	0.0	0.0094	15.8	0.0	2.2	2	0	0	2	2	2	1	RuvB	C-terminal	winged	helix	domain
HTH_45	PF14947.6	gi|284161359|ref|YP_003399982.1|	-	0.00045	20.2	0.0	0.00066	19.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HemN_C	PF06969.16	gi|284161359|ref|YP_003399982.1|	-	0.0081	16.2	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_12	PF08461.10	gi|284161359|ref|YP_003399982.1|	-	0.051	13.5	0.0	0.13	12.2	0.0	1.7	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
Mrr_N	PF14338.6	gi|284161359|ref|YP_003399982.1|	-	0.12	12.5	0.1	0.46	10.6	0.0	1.9	2	0	0	2	2	2	0	Mrr	N-terminal	domain
TrmB	PF01978.19	gi|284161359|ref|YP_003399982.1|	-	0.12	12.3	0.0	0.3	11.0	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.6	gi|284161359|ref|YP_003399982.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.7	gi|284161359|ref|YP_003399982.1|	-	0.18	11.9	0.0	0.3	11.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
CRS1_YhbY	PF01985.21	gi|284161360|ref|YP_003399983.1|	-	5.8e-11	42.4	0.7	6.7e-11	42.2	0.7	1.1	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
Ribosomal_S19e	PF01090.19	gi|284161360|ref|YP_003399983.1|	-	0.041	13.6	0.1	0.049	13.3	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S19e
Lactamase_B	PF00753.27	gi|284161361|ref|YP_003399984.1|	-	1.9e-12	47.6	0.1	5.2e-12	46.2	0.1	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|284161361|ref|YP_003399984.1|	-	2.2e-05	24.1	0.0	2.8e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|284161361|ref|YP_003399984.1|	-	0.071	13.1	0.0	0.54	10.2	0.0	2.2	2	0	0	2	2	2	0	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_2	PF12706.7	gi|284161362|ref|YP_003399985.1|	-	1.2e-27	96.7	0.0	1.5e-27	96.4	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284161362|ref|YP_003399985.1|	-	3.2e-14	53.4	0.0	5.4e-14	52.7	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.6	gi|284161362|ref|YP_003399985.1|	-	1.9e-06	27.9	0.0	4.8e-06	26.6	0.0	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|284161362|ref|YP_003399985.1|	-	0.0078	15.7	0.0	0.01	15.3	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
DUF4147	PF13660.6	gi|284161363|ref|YP_003399986.1|	-	7.6e-79	264.5	0.0	1.1e-78	264.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.13	gi|284161363|ref|YP_003399986.1|	-	1e-34	119.0	0.5	1.8e-34	118.2	0.5	1.5	1	0	0	1	1	1	1	MOFRL	family
NBD_C	PF17042.5	gi|284161363|ref|YP_003399986.1|	-	0.059	13.9	0.1	0.21	12.1	0.0	2.0	2	0	0	2	2	2	0	Nucleotide-binding	C-terminal	domain
tRNA_synthFbeta	PF17759.1	gi|284161365|ref|YP_003399988.1|	-	0.021	14.3	0.0	0.023	14.1	0.0	1.2	1	0	0	1	1	1	0	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
CBFD_NFYB_HMF	PF00808.23	gi|284161366|ref|YP_003399989.1|	-	9e-19	67.5	4.0	1e-18	67.4	4.0	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|284161366|ref|YP_003399989.1|	-	4.3e-08	33.6	1.1	5.4e-08	33.3	1.1	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-T_C	PF15511.6	gi|284161366|ref|YP_003399989.1|	-	0.00064	19.8	0.1	0.00076	19.6	0.1	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TFIID-31kDa	PF02291.15	gi|284161366|ref|YP_003399989.1|	-	0.0012	18.9	0.1	0.0013	18.8	0.1	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
CID_GANP	PF16766.5	gi|284161366|ref|YP_003399989.1|	-	0.0094	16.1	1.0	0.01	16.0	1.0	1.1	1	0	0	1	1	1	1	Binding	region	of	GANP	to	ENY2
CENP-S	PF15630.6	gi|284161366|ref|YP_003399989.1|	-	0.011	16.1	0.1	0.015	15.7	0.1	1.2	1	0	0	1	1	1	0	CENP-S	protein
TFIID-18kDa	PF02269.16	gi|284161366|ref|YP_003399989.1|	-	0.036	14.1	0.1	0.042	13.9	0.1	1.2	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
Con-6	PF10346.9	gi|284161366|ref|YP_003399989.1|	-	0.13	12.3	0.3	0.13	12.3	0.3	1.9	3	0	0	3	3	3	0	Conidiation	protein	6
NolV	PF06635.12	gi|284161366|ref|YP_003399989.1|	-	0.16	11.3	3.3	0.17	11.2	3.3	1.0	1	0	0	1	1	1	0	Nodulation	protein	NolV
GnsAB_toxin	PF08178.11	gi|284161366|ref|YP_003399989.1|	-	0.17	11.9	3.8	0.28	11.1	3.8	1.4	1	1	0	1	1	1	0	GnsA/GnsB	toxin	of	bacterial	toxin-antitoxin	system
DUF2934	PF11154.8	gi|284161366|ref|YP_003399989.1|	-	0.27	10.9	3.3	0.92	9.2	0.6	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2934)
Herpes_UL36	PF03586.13	gi|284161366|ref|YP_003399989.1|	-	0.32	10.3	4.4	0.35	10.1	4.4	1.0	1	0	0	1	1	1	0	Herpesvirus	UL36	tegument	protein
CBS	PF00571.28	gi|284161367|ref|YP_003399990.1|	-	6.6e-30	103.3	19.3	8e-12	45.4	1.3	4.9	5	1	1	6	6	6	3	CBS	domain
PdaC	PF13739.6	gi|284161367|ref|YP_003399990.1|	-	0.97	10.5	5.8	3.6	8.6	3.4	2.7	2	1	0	2	2	2	0	Deacetylase	PdaC
Iso_dh	PF00180.20	gi|284161368|ref|YP_003399991.1|	-	2.3e-113	378.9	0.0	2.7e-113	378.7	0.0	1.1	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Methyltr_RsmB-F	PF01189.17	gi|284161369|ref|YP_003399992.1|	-	6.9e-62	208.6	0.0	1.3e-61	207.8	0.0	1.4	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|284161369|ref|YP_003399992.1|	-	2e-10	41.1	0.0	5.3e-10	39.6	0.0	1.8	1	0	0	1	1	1	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
FtsJ	PF01728.19	gi|284161369|ref|YP_003399992.1|	-	1.9e-08	34.6	0.0	1.1e-07	32.2	0.0	2.1	2	1	0	3	3	3	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|284161369|ref|YP_003399992.1|	-	2.7e-05	24.0	0.0	7.6e-05	22.6	0.0	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|284161369|ref|YP_003399992.1|	-	4.3e-05	23.3	0.1	8.8e-05	22.3	0.1	1.5	1	0	0	1	1	1	1	Met-10+	like-protein
N6_Mtase	PF02384.16	gi|284161369|ref|YP_003399992.1|	-	0.0031	16.8	0.0	0.0053	16.1	0.0	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
NusB	PF01029.18	gi|284161369|ref|YP_003399992.1|	-	0.0034	17.6	0.3	0.013	15.7	0.1	2.0	2	0	0	2	2	2	1	NusB	family
Ubie_methyltran	PF01209.18	gi|284161369|ref|YP_003399992.1|	-	0.0053	16.1	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|284161369|ref|YP_003399992.1|	-	0.055	14.2	0.1	0.18	12.5	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
DUF3232	PF11554.8	gi|284161369|ref|YP_003399992.1|	-	0.54	10.6	3.5	0.82	10.1	0.2	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3232)
DUF1646	PF07854.12	gi|284161370|ref|YP_003399993.1|	-	1.9e-137	458.3	32.0	2.4e-137	458.0	32.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1646)
Isochorismatase	PF00857.20	gi|284161371|ref|YP_003399994.1|	-	2e-24	86.7	0.9	4.1e-23	82.4	0.9	2.0	1	1	0	1	1	1	1	Isochorismatase	family
AMP-binding	PF00501.28	gi|284161372|ref|YP_003399995.1|	-	2e-103	346.2	0.0	2.5e-103	345.9	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|284161372|ref|YP_003399995.1|	-	1.5e-30	106.0	1.2	1.5e-30	106.0	1.2	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|284161372|ref|YP_003399995.1|	-	2.5e-18	65.7	2.5	2.5e-18	65.7	2.5	2.4	2	0	0	2	2	2	1	Acetyl-coenzyme	A	synthetase	N-terminus
AAA_5	PF07728.14	gi|284161372|ref|YP_003399995.1|	-	0.2	11.6	0.0	0.42	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Thy1	PF02511.15	gi|284161373|ref|YP_003399996.1|	-	1.6e-52	178.1	0.3	1.9e-52	177.8	0.3	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
PHM7_cyt	PF14703.6	gi|284161373|ref|YP_003399996.1|	-	0.00065	20.0	0.3	0.0048	17.1	0.3	2.1	1	1	0	1	1	1	1	Cytosolic	domain	of	10TM	putative	phosphate	transporter
Coat_F	PF07875.12	gi|284161373|ref|YP_003399996.1|	-	0.021	15.0	0.0	0.088	13.0	0.0	1.9	2	0	0	2	2	2	0	Coat	F	domain
MauE	PF07291.11	gi|284161375|ref|YP_003399998.1|	-	0.011	15.6	0.5	0.011	15.5	0.5	1.2	1	0	0	1	1	1	0	Methylamine	utilisation	protein	MauE
SWIM	PF04434.17	gi|284161377|ref|YP_003400000.1|	-	1.6e-08	34.0	0.2	2.7e-08	33.3	0.2	1.3	1	0	0	1	1	1	1	SWIM	zinc	finger
Lon_C	PF05362.13	gi|284161378|ref|YP_003400001.1|	-	9e-11	41.7	0.1	1.9e-10	40.7	0.1	1.5	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
SesA	PF17107.5	gi|284161378|ref|YP_003400001.1|	-	0.0088	16.2	0.1	0.25	11.5	0.0	2.7	2	0	0	2	2	2	1	N-terminal	domain	on	NACHT_NTPase	and	P-loop	NTPases
DUF4874	PF16173.5	gi|284161378|ref|YP_003400001.1|	-	0.032	13.9	0.1	0.063	13.0	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4874)
Peptidase_C71	PF12386.8	gi|284161378|ref|YP_003400001.1|	-	0.044	13.4	0.2	0.044	13.4	0.2	1.9	2	0	0	2	2	2	0	Pseudomurein	endo-isopeptidase	Pei
Nnf1	PF03980.14	gi|284161378|ref|YP_003400001.1|	-	0.06	13.7	3.3	0.064	13.6	1.3	1.9	2	0	0	2	2	2	0	Nnf1
ArsR	PF09824.9	gi|284161378|ref|YP_003400001.1|	-	0.15	11.6	4.8	1.4	8.5	0.2	2.8	2	1	1	3	3	3	0	ArsR	transcriptional	regulator
Spectrin	PF00435.21	gi|284161378|ref|YP_003400001.1|	-	0.3	11.6	1.4	4.5	7.8	0.1	2.8	3	0	0	3	3	3	0	Spectrin	repeat
HEPN	PF05168.14	gi|284161378|ref|YP_003400001.1|	-	0.36	11.0	0.1	0.36	11.0	0.1	3.6	4	1	0	4	4	4	0	HEPN	domain
Spc24	PF08286.11	gi|284161378|ref|YP_003400001.1|	-	0.73	10.1	5.1	8	6.8	0.4	2.6	1	1	0	2	2	2	0	Spc24	subunit	of	Ndc80
Exonuc_VII_S	PF02609.16	gi|284161378|ref|YP_003400001.1|	-	1.6	8.9	9.1	0.14	12.2	0.6	3.3	3	1	1	4	4	4	0	Exonuclease	VII	small	subunit
DUF92	PF01940.16	gi|284161379|ref|YP_003400002.1|	-	1.7e-50	171.7	14.5	1.7e-50	171.7	14.5	2.6	2	2	0	2	2	2	2	Integral	membrane	protein	DUF92
Prenyltransf	PF01255.19	gi|284161380|ref|YP_003400003.1|	-	2.2e-18	66.6	0.0	4.7e-16	59.0	0.0	2.1	1	1	1	2	2	2	2	Putative	undecaprenyl	diphosphate	synthase
hnRNP_Q_AcD	PF18360.1	gi|284161380|ref|YP_003400003.1|	-	0.031	14.2	0.1	0.084	12.8	0.1	1.7	1	0	0	1	1	1	0	Heterogeneous	nuclear	ribonucleoprotein	Q	acidic	domain
TGT_C2	PF14810.6	gi|284161381|ref|YP_003400004.1|	-	4.5e-30	103.6	0.1	1.5e-29	101.9	0.0	1.8	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|284161381|ref|YP_003400004.1|	-	4.9e-19	68.1	1.9	7.5e-19	67.5	1.9	1.3	1	0	0	1	1	1	1	PUA	domain
UPF0113	PF03657.13	gi|284161381|ref|YP_003400004.1|	-	2.6e-06	27.6	0.1	4.3e-06	26.9	0.1	1.4	1	0	0	1	1	1	1	UPF0113	PUA	domain
PUA_3	PF17785.1	gi|284161381|ref|YP_003400004.1|	-	0.033	14.0	0.1	0.062	13.1	0.1	1.5	1	0	0	1	1	1	0	PUA-like	domain
TPR_10	PF13374.6	gi|284161382|ref|YP_003400005.1|	-	6.5e-17	60.8	7.1	7.3e-06	25.7	0.0	4.5	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|284161382|ref|YP_003400005.1|	-	2.9e-16	59.5	10.8	1.7e-08	34.6	1.2	4.4	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|284161382|ref|YP_003400005.1|	-	4.4e-16	57.7	17.2	0.00063	19.7	0.3	5.6	5	0	0	5	5	5	4	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|284161382|ref|YP_003400005.1|	-	4.9e-15	54.4	12.0	0.0048	16.9	0.1	5.7	5	0	0	5	5	5	4	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|284161382|ref|YP_003400005.1|	-	8.2e-14	50.8	14.3	0.014	15.2	0.6	5.6	5	0	0	5	5	5	5	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|284161382|ref|YP_003400005.1|	-	4e-09	35.9	9.3	0.11	12.6	0.4	5.2	5	1	0	5	5	5	3	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|284161382|ref|YP_003400005.1|	-	2.1e-07	31.2	1.1	0.15	13.0	0.0	4.8	5	0	0	5	5	4	1	Tetratricopeptide	repeat
DUF2225	PF09986.9	gi|284161382|ref|YP_003400005.1|	-	0.00028	20.7	4.6	0.00028	20.7	4.6	3.4	1	1	3	4	4	4	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
TPR_17	PF13431.6	gi|284161382|ref|YP_003400005.1|	-	0.0012	19.0	3.0	2.5	8.7	0.1	4.5	5	0	0	5	5	3	1	Tetratricopeptide	repeat
GAS	PF13851.6	gi|284161382|ref|YP_003400005.1|	-	0.0014	18.1	2.0	0.17	11.2	0.9	2.5	1	1	1	2	2	2	2	Growth-arrest	specific	micro-tubule	binding
TPR_19	PF14559.6	gi|284161382|ref|YP_003400005.1|	-	0.0036	17.8	8.7	1.2	9.7	0.1	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
PUL	PF08324.11	gi|284161382|ref|YP_003400005.1|	-	0.0046	16.2	0.0	0.014	14.7	0.1	1.7	2	0	0	2	2	2	1	PUL	domain
Sel1	PF08238.12	gi|284161382|ref|YP_003400005.1|	-	0.0054	17.4	0.4	0.73	10.6	0.1	3.4	3	0	0	3	3	3	1	Sel1	repeat
HMG_box	PF00505.19	gi|284161382|ref|YP_003400005.1|	-	0.0089	16.4	4.7	0.13	12.7	0.7	2.8	2	0	0	2	2	2	1	HMG	(high	mobility	group)	box
N6_N4_Mtase	PF01555.18	gi|284161382|ref|YP_003400005.1|	-	0.014	15.2	0.2	0.024	14.3	0.2	1.4	1	1	0	1	1	1	0	DNA	methylase
Glyco_hydro_88	PF07470.13	gi|284161382|ref|YP_003400005.1|	-	0.014	14.5	1.7	0.024	13.7	1.7	1.3	1	0	0	1	1	1	0	Glycosyl	Hydrolase	Family	88
TPR_16	PF13432.6	gi|284161382|ref|YP_003400005.1|	-	0.016	15.9	4.2	2.3	9.0	0.3	4.0	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|284161382|ref|YP_003400005.1|	-	0.25	12.0	6.8	2	9.2	0.0	4.7	5	0	0	5	5	4	0	Tetratricopeptide	repeat
DUF4810	PF16068.5	gi|284161382|ref|YP_003400005.1|	-	0.32	11.6	4.2	5.3	7.7	0.6	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4810)
FAD_binding_3	PF01494.19	gi|284161383|ref|YP_003400006.1|	-	3e-12	46.4	0.2	2.1e-07	30.6	0.0	3.1	2	1	0	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|284161383|ref|YP_003400006.1|	-	2.6e-06	26.6	0.0	0.013	14.3	0.1	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|284161383|ref|YP_003400006.1|	-	9e-05	21.7	0.1	0.019	14.0	0.0	2.4	2	1	1	3	3	3	2	Lycopene	cyclase	protein
NAD_binding_8	PF13450.6	gi|284161383|ref|YP_003400006.1|	-	0.0012	19.0	0.1	0.0023	18.1	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|284161383|ref|YP_003400006.1|	-	0.0013	18.4	0.1	0.0043	16.7	0.2	1.8	1	1	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|284161383|ref|YP_003400006.1|	-	0.0016	17.7	0.1	0.0034	16.6	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|284161383|ref|YP_003400006.1|	-	0.023	13.4	0.1	0.033	12.9	0.1	1.2	1	0	0	1	1	1	0	HI0933-like	protein
GIDA	PF01134.22	gi|284161383|ref|YP_003400006.1|	-	0.047	12.8	0.1	0.075	12.1	0.1	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
SE	PF08491.10	gi|284161383|ref|YP_003400006.1|	-	0.075	12.1	0.0	0.25	10.3	0.0	1.8	2	0	0	2	2	2	0	Squalene	epoxidase
Pyr_redox_3	PF13738.6	gi|284161383|ref|YP_003400006.1|	-	0.079	12.2	0.1	0.11	11.7	0.1	1.5	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161383|ref|YP_003400006.1|	-	0.084	13.4	0.2	0.38	11.4	0.0	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|284161383|ref|YP_003400006.1|	-	0.29	10.2	0.3	0.47	9.5	0.3	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Flavin_Reduct	PF01613.18	gi|284161384|ref|YP_003400007.1|	-	1.9e-25	89.8	0.0	2.4e-25	89.4	0.0	1.1	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DAP_epimerase	PF01678.19	gi|284161385|ref|YP_003400008.1|	-	1.6e-61	205.9	2.7	4.3e-36	123.7	0.1	2.0	2	0	0	2	2	2	2	Diaminopimelate	epimerase
Pro_racemase	PF05544.11	gi|284161385|ref|YP_003400008.1|	-	0.01	14.9	0.1	0.049	12.7	0.0	1.8	2	0	0	2	2	2	0	Proline	racemase
Cpn60_TCP1	PF00118.24	gi|284161386|ref|YP_003400009.1|	-	1.9e-189	630.4	18.9	2.1e-189	630.2	18.9	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
HK97-gp10_like	PF04883.12	gi|284161386|ref|YP_003400009.1|	-	0.17	12.9	9.9	11	7.1	0.4	4.5	3	1	0	3	3	3	0	Bacteriophage	HK97-gp10,	putative	tail-component
TIM	PF00121.18	gi|284161387|ref|YP_003400010.1|	-	4.4e-13	49.2	0.1	2.1e-12	46.9	0.0	1.8	1	1	1	2	2	2	1	Triosephosphate	isomerase
ThiG	PF05690.14	gi|284161387|ref|YP_003400010.1|	-	1.1e-05	24.9	0.0	1.8e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.15	gi|284161387|ref|YP_003400010.1|	-	2.7e-05	23.7	0.1	3.8e-05	23.3	0.1	1.1	1	0	0	1	1	1	1	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|284161387|ref|YP_003400010.1|	-	0.0023	17.0	0.0	0.0038	16.3	0.0	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.21	gi|284161387|ref|YP_003400010.1|	-	0.008	15.7	0.0	0.024	14.1	0.0	1.7	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
Glu_synthase	PF01645.17	gi|284161387|ref|YP_003400010.1|	-	0.0087	15.2	0.3	0.022	13.9	0.3	1.6	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
IGPS	PF00218.21	gi|284161387|ref|YP_003400010.1|	-	0.073	12.2	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
PfkB	PF00294.24	gi|284161388|ref|YP_003400011.1|	-	5.4e-64	216.4	0.0	6.3e-64	216.2	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|284161388|ref|YP_003400011.1|	-	0.0071	15.8	0.0	0.011	15.1	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Semialdhyde_dh	PF01118.24	gi|284161389|ref|YP_003400012.1|	-	2.8e-36	124.6	0.0	4.4e-36	124.0	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.18	gi|284161389|ref|YP_003400012.1|	-	7e-12	45.8	0.0	1.6e-11	44.7	0.0	1.6	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	dimerisation	domain
DapB_N	PF01113.20	gi|284161389|ref|YP_003400012.1|	-	0.0048	17.0	0.0	0.017	15.3	0.0	2.0	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
F420_oxidored	PF03807.17	gi|284161389|ref|YP_003400012.1|	-	0.03	14.9	0.0	0.058	14.0	0.0	1.5	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|284161389|ref|YP_003400012.1|	-	0.063	14.1	0.0	0.12	13.2	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
OrfB_Zn_ribbon	PF07282.11	gi|284161391|ref|YP_003400014.1|	-	4.9e-22	77.6	0.6	1.2e-21	76.4	0.6	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284161391|ref|YP_003400014.1|	-	0.0019	18.4	0.6	0.0019	18.4	0.6	2.2	2	0	0	2	2	2	1	Probable	transposase
TF_Zn_Ribbon	PF08271.12	gi|284161391|ref|YP_003400014.1|	-	0.0089	15.5	2.2	0.0089	15.5	2.2	1.8	2	0	0	2	2	2	1	TFIIB	zinc-binding
RPA_interact_C	PF14768.6	gi|284161391|ref|YP_003400014.1|	-	0.01	16.4	0.8	0.023	15.2	0.8	1.6	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
DUF2318	PF10080.9	gi|284161391|ref|YP_003400014.1|	-	0.023	14.8	0.2	0.079	13.1	0.2	1.9	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
PCP_red	PF08369.10	gi|284161391|ref|YP_003400014.1|	-	0.029	14.6	0.0	0.46	10.7	0.0	2.3	2	0	0	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
Spt4	PF06093.13	gi|284161391|ref|YP_003400014.1|	-	0.051	13.7	1.3	0.25	11.5	1.3	2.2	1	0	0	1	1	1	0	Spt4/RpoE2	zinc	finger
DZR	PF12773.7	gi|284161391|ref|YP_003400014.1|	-	0.076	13.0	0.5	0.18	11.8	0.5	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|284161391|ref|YP_003400014.1|	-	0.13	11.7	3.1	0.42	10.1	3.1	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|284161391|ref|YP_003400014.1|	-	0.19	11.7	0.3	0.37	10.8	0.3	1.4	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-Mss51	PF13824.6	gi|284161391|ref|YP_003400014.1|	-	1.2	9.3	3.5	2.8	8.1	0.6	2.4	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Rubredoxin_2	PF18073.1	gi|284161391|ref|YP_003400014.1|	-	6.6	6.6	5.9	7.9	6.3	0.1	2.9	3	0	0	3	3	3	0	Rubredoxin	metal	binding	domain
SQHop_cyclase_C	PF13243.6	gi|284161392|ref|YP_003400015.1|	-	0.012	14.7	0.1	0.013	14.6	0.1	1.0	1	0	0	1	1	1	0	Squalene-hopene	cyclase	C-terminal	domain
DNA_pol_B	PF00136.21	gi|284161393|ref|YP_003400016.1|	-	2e-81	274.1	0.0	2.8e-81	273.6	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|284161393|ref|YP_003400016.1|	-	6.7e-36	124.1	0.7	4.6e-17	62.2	0.1	2.5	1	1	1	2	2	2	2	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|284161393|ref|YP_003400016.1|	-	1.4e-09	38.0	0.0	2.7e-09	37.0	0.0	1.4	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.6	gi|284161393|ref|YP_003400016.1|	-	3.3e-09	36.9	0.0	8.9e-09	35.6	0.0	1.6	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_2	PF03175.13	gi|284161393|ref|YP_003400016.1|	-	0.0011	17.9	0.0	0.0061	15.5	0.0	2.0	2	0	0	2	2	2	1	DNA	polymerase	type	B,	organellar	and	viral
Arm-DNA-bind_2	PF12167.8	gi|284161393|ref|YP_003400016.1|	-	0.072	13.0	0.2	0.24	11.3	0.2	1.9	1	0	0	1	1	1	0	Arm	DNA-binding	domain
Aminotran_4	PF01063.19	gi|284161394|ref|YP_003400017.1|	-	2e-58	197.9	0.0	2.3e-58	197.7	0.0	1.0	1	0	0	1	1	1	1	Amino-transferase	class	IV
ACT	PF01842.25	gi|284161395|ref|YP_003400018.1|	-	7.5e-08	32.0	0.7	1.8e-07	30.8	0.2	1.8	2	0	0	2	2	2	1	ACT	domain
Pico_P2B	PF01552.17	gi|284161395|ref|YP_003400018.1|	-	0.041	14.0	0.2	0.079	13.1	0.2	1.5	1	0	0	1	1	1	0	Picornavirus	2B	protein
ACT_4	PF13291.6	gi|284161395|ref|YP_003400018.1|	-	0.05	14.2	0.0	0.16	12.6	0.0	1.9	1	1	0	1	1	1	0	ACT	domain
Homoserine_dh	PF00742.19	gi|284161396|ref|YP_003400019.1|	-	1.6e-54	184.4	0.1	2.9e-54	183.6	0.1	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.16	gi|284161396|ref|YP_003400019.1|	-	2.3e-11	44.4	0.0	4.6e-11	43.4	0.0	1.5	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.21	gi|284161396|ref|YP_003400019.1|	-	3.9e-07	30.1	0.2	6.6e-07	29.3	0.2	1.6	1	1	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|284161396|ref|YP_003400019.1|	-	0.0028	17.9	0.1	0.013	15.8	0.1	2.1	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
GFO_IDH_MocA	PF01408.22	gi|284161396|ref|YP_003400019.1|	-	0.015	16.1	0.0	0.046	14.5	0.0	1.8	1	1	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Gp_dh_N	PF00044.24	gi|284161396|ref|YP_003400019.1|	-	0.043	14.2	0.5	0.12	12.7	0.5	2.0	1	1	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|284161396|ref|YP_003400019.1|	-	0.11	13.1	0.0	0.44	11.2	0.0	2.1	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Arc_PepC_II	PF06847.11	gi|284161397|ref|YP_003400020.1|	-	2.9e-17	63.0	0.9	1.3e-16	60.8	0.3	2.2	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.18	gi|284161397|ref|YP_003400020.1|	-	1e-11	45.2	4.0	1e-11	45.2	4.0	1.9	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
DUF2545	PF10810.8	gi|284161397|ref|YP_003400020.1|	-	1.1	9.5	10.1	0.86	9.8	4.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2545)
DUF2109	PF09882.9	gi|284161397|ref|YP_003400020.1|	-	8.1	6.5	11.4	0.54	10.3	3.1	2.8	3	0	0	3	3	3	0	Predicted	membrane	protein	(DUF2109)
DPM3	PF08285.11	gi|284161397|ref|YP_003400020.1|	-	9.5	6.5	9.7	2	8.6	0.1	2.7	2	1	1	3	3	3	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
PGM_PMM_I	PF02878.16	gi|284161398|ref|YP_003400021.1|	-	5.6e-39	133.0	0.0	1e-38	132.1	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|284161398|ref|YP_003400021.1|	-	2.1e-30	105.4	0.1	5e-30	104.2	0.1	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|284161398|ref|YP_003400021.1|	-	1.1e-27	96.5	0.0	2e-27	95.6	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|284161398|ref|YP_003400021.1|	-	5.2e-13	49.0	0.6	1.8e-12	47.3	0.0	2.2	3	0	0	3	3	3	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
AAA_18	PF13238.6	gi|284161399|ref|YP_003400022.1|	-	1e-23	84.3	0.4	1.5e-23	83.8	0.4	1.3	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|284161399|ref|YP_003400022.1|	-	3.8e-06	26.9	0.2	0.055	13.3	0.0	2.2	1	1	1	2	2	2	2	Deoxynucleoside	kinase
CoaE	PF01121.20	gi|284161399|ref|YP_003400022.1|	-	1.1e-05	25.2	0.1	0.0036	17.0	0.0	2.8	1	1	2	3	3	3	1	Dephospho-CoA	kinase
AAA_33	PF13671.6	gi|284161399|ref|YP_003400022.1|	-	4.8e-05	23.6	0.0	0.00014	22.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|284161399|ref|YP_003400022.1|	-	5.1e-05	23.7	0.2	0.013	16.0	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|284161399|ref|YP_003400022.1|	-	7.3e-05	23.1	0.1	0.00014	22.1	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
UPF0180	PF03698.13	gi|284161399|ref|YP_003400022.1|	-	9.7e-05	22.5	3.2	0.043	14.0	0.1	3.1	2	2	0	2	2	2	2	Uncharacterised	protein	family	(UPF0180)
CPT	PF07931.12	gi|284161399|ref|YP_003400022.1|	-	0.0039	17.0	0.0	2.4	8.0	0.0	2.3	2	0	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
AAA	PF00004.29	gi|284161399|ref|YP_003400022.1|	-	0.0061	17.0	1.3	0.034	14.6	1.3	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Cytidylate_kin	PF02224.18	gi|284161399|ref|YP_003400022.1|	-	0.0074	16.0	0.0	1.1	9.0	0.0	2.2	2	0	0	2	2	2	1	Cytidylate	kinase
AAA_22	PF13401.6	gi|284161399|ref|YP_003400022.1|	-	0.0091	16.3	0.3	0.021	15.1	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|284161399|ref|YP_003400022.1|	-	0.01	15.3	0.0	0.016	14.6	0.0	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Thymidylate_kin	PF02223.17	gi|284161399|ref|YP_003400022.1|	-	0.013	15.1	0.2	1.6	8.4	0.0	2.5	2	1	1	3	3	3	0	Thymidylate	kinase
MeaB	PF03308.16	gi|284161399|ref|YP_003400022.1|	-	0.021	13.8	0.4	0.043	12.8	0.1	1.6	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_16	PF13191.6	gi|284161399|ref|YP_003400022.1|	-	0.047	14.1	0.2	0.054	13.9	0.2	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|284161399|ref|YP_003400022.1|	-	0.056	13.5	0.5	0.1	12.7	0.5	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ATP_bind_2	PF03668.15	gi|284161399|ref|YP_003400022.1|	-	0.065	12.5	0.9	0.22	10.8	0.9	1.8	1	1	0	1	1	1	0	P-loop	ATPase	protein	family
AAA_5	PF07728.14	gi|284161399|ref|YP_003400022.1|	-	0.08	12.9	0.2	0.53	10.3	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.15	gi|284161399|ref|YP_003400022.1|	-	0.081	12.8	0.4	0.081	12.8	0.4	2.1	1	1	1	2	2	2	0	NTPase
AAA_24	PF13479.6	gi|284161399|ref|YP_003400022.1|	-	0.11	12.2	0.2	0.18	11.5	0.1	1.6	1	1	1	2	2	2	0	AAA	domain
FliH	PF02108.16	gi|284161399|ref|YP_003400022.1|	-	0.12	12.4	2.1	1.4	9.0	0.4	2.2	1	1	1	2	2	2	0	Flagellar	assembly	protein	FliH
Glu-tRNAGln	PF02686.15	gi|284161399|ref|YP_003400022.1|	-	0.15	12.4	0.8	0.8	10.0	0.4	2.2	1	1	1	2	2	2	0	Glu-tRNAGln	amidotransferase	C	subunit
Glycos_trans_3N	PF02885.17	gi|284161399|ref|YP_003400022.1|	-	0.16	11.9	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family,	helical	bundle	domain
Metallophos	PF00149.28	gi|284161400|ref|YP_003400023.1|	-	5e-09	36.9	3.7	1.2e-08	35.7	0.3	2.2	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|284161400|ref|YP_003400023.1|	-	5.2e-07	30.0	0.8	8.3e-07	29.3	0.8	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
HAD	PF12710.7	gi|284161400|ref|YP_003400023.1|	-	0.076	13.4	0.0	0.1	13.0	0.0	1.3	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
CarS-like	PF01864.17	gi|284161401|ref|YP_003400024.1|	-	8.1e-71	237.6	9.1	9e-71	237.4	9.1	1.0	1	0	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|284161401|ref|YP_003400024.1|	-	2.9e-05	24.0	2.2	2.9e-05	24.0	2.2	1.5	2	0	0	2	2	2	1	Cytidylyltransferase	family
Ribosomal_S8e	PF01201.22	gi|284161402|ref|YP_003400025.1|	-	2.3e-36	125.0	1.7	2.8e-36	124.7	1.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8e
DUF4467	PF14729.6	gi|284161402|ref|YP_003400025.1|	-	0.019	15.3	0.0	0.025	14.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	with	cystatin-like	fold	(DUF4467)
Topoisom_bac	PF01131.20	gi|284161403|ref|YP_003400026.1|	-	8.3e-116	387.4	2.5	1.1e-115	387.0	2.5	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.22	gi|284161403|ref|YP_003400026.1|	-	3.8e-15	56.0	2.0	6.3e-15	55.3	0.1	2.4	2	0	0	2	2	2	1	Toprim	domain
zf-C4_Topoisom	PF01396.19	gi|284161403|ref|YP_003400026.1|	-	6.1e-13	48.3	3.3	1.5e-12	47.0	3.3	1.8	1	0	0	1	1	1	1	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim_4	PF13662.6	gi|284161403|ref|YP_003400026.1|	-	0.019	15.4	0.2	0.054	14.0	0.2	1.8	1	0	0	1	1	1	0	Toprim	domain
HEPN-like_int	PF18867.1	gi|284161403|ref|YP_003400026.1|	-	0.15	12.0	1.2	0.3	11.0	0.4	1.9	2	0	0	2	2	2	0	HEPN-like	integron	domain
ThiS	PF02597.20	gi|284161404|ref|YP_003400027.1|	-	3.4e-11	43.6	0.1	4e-11	43.4	0.1	1.1	1	0	0	1	1	1	1	ThiS	family
Lambda_tail_I	PF06805.12	gi|284161404|ref|YP_003400027.1|	-	4.3e-05	23.8	0.0	5.3e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	Bacteriophage	lambda	tail	assembly	protein	I
DUF2555	PF10742.9	gi|284161404|ref|YP_003400027.1|	-	0.18	11.7	0.1	0.34	10.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2555)
AAA_26	PF13500.6	gi|284161405|ref|YP_003400028.1|	-	4.8e-28	98.4	0.0	8.8e-28	97.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DRTGG	PF07085.12	gi|284161405|ref|YP_003400028.1|	-	3.6e-27	94.2	0.1	7.9e-27	93.1	0.1	1.6	1	0	0	1	1	1	1	DRTGG	domain
CbiA	PF01656.23	gi|284161405|ref|YP_003400028.1|	-	0.00047	20.2	0.0	0.0027	17.8	0.0	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Hpr_kinase_N	PF02603.16	gi|284161405|ref|YP_003400028.1|	-	0.0022	18.0	0.0	0.0056	16.7	0.0	1.6	1	0	0	1	1	1	1	HPr	Serine	kinase	N	terminus
MobB	PF03205.14	gi|284161405|ref|YP_003400028.1|	-	0.045	13.6	0.1	2.6	8.0	0.0	2.6	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NBD_C	PF17042.5	gi|284161405|ref|YP_003400028.1|	-	0.14	12.7	0.0	0.42	11.1	0.0	1.8	2	0	0	2	2	2	0	Nucleotide-binding	C-terminal	domain
ATP-grasp_5	PF13549.6	gi|284161406|ref|YP_003400029.1|	-	3.9e-74	248.9	0.9	9e-74	247.7	0.7	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|284161406|ref|YP_003400029.1|	-	9.2e-56	187.5	1.1	7.2e-54	181.3	0.2	2.8	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|284161406|ref|YP_003400029.1|	-	1.2e-30	106.4	2.1	1.1e-28	100.0	0.3	3.5	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|284161406|ref|YP_003400029.1|	-	4.8e-17	62.4	1.0	1.8e-16	60.6	0.2	2.5	2	0	0	2	2	2	1	CoA	binding	domain
F420_oxidored	PF03807.17	gi|284161406|ref|YP_003400029.1|	-	0.00033	21.2	0.2	0.0036	17.9	0.1	2.7	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
ATP-grasp_2	PF08442.10	gi|284161406|ref|YP_003400029.1|	-	0.00036	20.2	0.5	0.00082	19.0	0.5	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|284161406|ref|YP_003400029.1|	-	0.0069	15.9	0.1	0.016	14.7	0.1	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Semialdhyde_dh	PF01118.24	gi|284161406|ref|YP_003400029.1|	-	0.042	14.3	0.1	0.76	10.2	0.1	2.8	2	1	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
CBS	PF00571.28	gi|284161407|ref|YP_003400030.1|	-	2.8e-19	69.3	5.4	7.7e-09	35.9	0.2	2.1	2	0	0	2	2	2	2	CBS	domain
Acetyltransf_1	PF00583.25	gi|284161407|ref|YP_003400030.1|	-	0.058	13.6	0.0	3.3	8.0	0.0	2.1	1	1	1	2	2	2	0	Acetyltransferase	(GNAT)	family
PPS_PS	PF02006.16	gi|284161408|ref|YP_003400031.1|	-	8.1e-74	247.0	1.9	1e-73	246.6	1.9	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
DUF2031	PF09592.10	gi|284161408|ref|YP_003400031.1|	-	0.0058	16.2	2.3	0.011	15.3	2.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2031)
NMO	PF03060.15	gi|284161408|ref|YP_003400031.1|	-	0.065	12.6	0.0	0.079	12.3	0.0	1.3	1	0	0	1	1	1	0	Nitronate	monooxygenase
AAA_31	PF13614.6	gi|284161408|ref|YP_003400031.1|	-	0.13	12.1	0.7	1.1	9.2	0.3	2.2	1	1	1	2	2	2	0	AAA	domain
POTRA_1	PF08478.10	gi|284161408|ref|YP_003400031.1|	-	0.17	12.2	0.5	6.4	7.2	0.1	2.3	2	0	0	2	2	2	0	POTRA	domain,	FtsQ-type
ApbE	PF02424.15	gi|284161409|ref|YP_003400032.1|	-	0.00047	19.8	1.5	0.022	14.3	1.5	2.1	1	1	0	1	1	1	1	ApbE	family
VWA_2	PF13519.6	gi|284161410|ref|YP_003400033.1|	-	1.3e-09	38.6	0.7	2.4e-08	34.6	0.7	2.4	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|284161410|ref|YP_003400033.1|	-	2.5e-06	27.0	0.4	1.4e-05	24.6	0.3	2.1	1	1	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
VWA	PF00092.28	gi|284161410|ref|YP_003400033.1|	-	2.3e-05	24.7	0.0	0.00071	19.9	0.0	2.3	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
CobT_C	PF11775.8	gi|284161410|ref|YP_003400033.1|	-	0.0004	20.1	0.1	0.00063	19.5	0.1	1.3	1	0	0	1	1	1	1	Cobalamin	biosynthesis	protein	CobT	VWA	domain
DUF2201	PF09967.9	gi|284161410|ref|YP_003400033.1|	-	0.019	15.1	0.0	0.037	14.2	0.0	1.4	1	0	0	1	1	1	0	VWA-like	domain	(DUF2201)
MSV199	PF10553.9	gi|284161410|ref|YP_003400033.1|	-	0.031	14.5	0.4	0.031	14.5	0.4	2.3	1	1	1	2	2	2	0	MSV199	domain
AAA_5	PF07728.14	gi|284161411|ref|YP_003400034.1|	-	4.6e-12	46.1	0.0	1.5e-08	34.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.21	gi|284161411|ref|YP_003400034.1|	-	5.7e-10	38.9	0.0	0.0011	18.4	0.0	2.4	2	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|284161411|ref|YP_003400034.1|	-	7.8e-10	38.7	0.0	3e-06	27.0	0.0	2.2	2	0	0	2	2	2	2	Sigma-54	interaction	domain
MCM	PF00493.23	gi|284161411|ref|YP_003400034.1|	-	9.6e-07	28.1	0.0	5.7e-05	22.3	0.0	2.2	2	0	0	2	2	2	1	MCM	P-loop	domain
AAA_PrkA	PF08298.11	gi|284161411|ref|YP_003400034.1|	-	7.2e-06	25.2	0.0	1.2e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	PrkA	AAA	domain
AAA_3	PF07726.11	gi|284161411|ref|YP_003400034.1|	-	1.4e-05	24.9	0.0	0.00029	20.7	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|284161411|ref|YP_003400034.1|	-	0.00039	20.9	0.1	0.0046	17.4	0.1	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|284161411|ref|YP_003400034.1|	-	0.002	18.3	0.0	0.55	10.3	0.0	2.4	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
TsaE	PF02367.17	gi|284161411|ref|YP_003400034.1|	-	0.0097	15.9	0.3	0.035	14.1	0.1	2.0	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
TIP49	PF06068.13	gi|284161411|ref|YP_003400034.1|	-	0.013	14.7	1.0	0.02	14.1	0.2	1.7	2	0	0	2	2	2	0	TIP49	P-loop	domain
AAA_16	PF13191.6	gi|284161411|ref|YP_003400034.1|	-	0.14	12.5	0.0	0.46	10.9	0.0	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
DUF167	PF02594.16	gi|284161412|ref|YP_003400035.1|	-	6.8e-22	77.4	0.0	8.8e-22	77.0	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YggU	family	COG1872
Glyco_hydro_67N	PF03648.14	gi|284161412|ref|YP_003400035.1|	-	0.098	12.9	0.0	0.11	12.8	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	67	N-terminus
GGACT	PF06094.12	gi|284161413|ref|YP_003400036.1|	-	8.8e-18	65.1	0.0	1.1e-17	64.8	0.0	1.1	1	0	0	1	1	1	1	Gamma-glutamyl	cyclotransferase,	AIG2-like
AIG2_2	PF13772.6	gi|284161413|ref|YP_003400036.1|	-	1.4e-15	57.4	0.0	3.9e-15	56.0	0.1	1.7	2	0	0	2	2	2	1	AIG2-like	family
DUF348	PF03990.14	gi|284161413|ref|YP_003400036.1|	-	0.061	13.1	0.9	0.19	11.5	0.1	2.2	2	0	0	2	2	2	0	G5-linked-Ubiquitin-like	domain
MoaC	PF01967.21	gi|284161414|ref|YP_003400037.1|	-	6.2e-52	175.3	2.0	6.9e-52	175.1	2.0	1.0	1	0	0	1	1	1	1	MoaC	family
zf-ribbon_3	PF13248.6	gi|284161415|ref|YP_003400038.1|	-	0.023	14.1	0.4	0.061	12.8	0.1	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
zf_Rg	PF17915.1	gi|284161415|ref|YP_003400038.1|	-	0.049	13.0	0.0	0.083	12.3	0.0	1.4	1	0	0	1	1	1	0	Reverse	gyrase	zinc	finger
zf-NADH-PPase	PF09297.11	gi|284161415|ref|YP_003400038.1|	-	0.059	13.0	0.4	0.11	12.2	0.4	1.4	1	0	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
PBP_like	PF12727.7	gi|284161416|ref|YP_003400039.1|	-	1.3e-61	207.1	0.1	5.4e-61	205.1	0.0	1.9	2	0	0	2	2	2	1	PBP	superfamily	domain
MoeA_N	PF03453.17	gi|284161416|ref|YP_003400039.1|	-	1.4e-44	151.7	0.6	2.5e-44	150.8	0.6	1.5	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|284161416|ref|YP_003400039.1|	-	3.3e-26	91.7	0.1	6.2e-26	90.8	0.1	1.5	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|284161416|ref|YP_003400039.1|	-	6.1e-19	68.0	0.0	1.4e-18	66.8	0.0	1.7	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
SBP_bac_11	PF13531.6	gi|284161416|ref|YP_003400039.1|	-	5.5e-06	26.3	0.0	1.2e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
Phosphonate-bd	PF12974.7	gi|284161416|ref|YP_003400039.1|	-	0.0044	16.7	0.0	0.0079	15.8	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
HTH_AsnC-type	PF13404.6	gi|284161416|ref|YP_003400039.1|	-	0.067	13.0	0.1	0.25	11.2	0.0	2.0	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.11	gi|284161416|ref|YP_003400039.1|	-	0.19	11.7	0.0	0.4	10.8	0.0	1.4	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
FecCD	PF01032.18	gi|284161417|ref|YP_003400040.1|	-	3.2e-78	262.9	32.7	4e-78	262.6	32.7	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.17	gi|284161417|ref|YP_003400040.1|	-	1.9e-05	24.3	17.4	1.9e-05	24.3	17.4	1.8	1	1	1	2	2	2	1	ABC	3	transport	family
Peripla_BP_2	PF01497.18	gi|284161418|ref|YP_003400041.1|	-	1.5e-40	139.3	0.0	1.8e-40	139.0	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
Hist_deacetyl	PF00850.19	gi|284161419|ref|YP_003400042.1|	-	9.4e-67	225.7	0.0	1.3e-66	225.2	0.0	1.2	1	0	0	1	1	1	1	Histone	deacetylase	domain
Prenyltrans	PF00432.21	gi|284161420|ref|YP_003400043.1|	-	1e-17	63.6	2.8	7.8e-05	22.3	0.1	5.5	5	0	0	5	5	5	3	Prenyltransferase	and	squalene	oxidase	repeat
SQHop_cyclase_C	PF13243.6	gi|284161420|ref|YP_003400043.1|	-	1.1e-17	64.1	4.7	7.1e-06	25.3	0.1	3.8	1	1	2	4	4	4	3	Squalene-hopene	cyclase	C-terminal	domain
DUF4430	PF14478.6	gi|284161420|ref|YP_003400043.1|	-	2.2e-12	47.4	0.3	3.5e-11	43.5	0.1	2.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4430)
SQHop_cyclase_N	PF13249.6	gi|284161420|ref|YP_003400043.1|	-	1.1e-09	37.9	0.1	0.0002	20.6	0.0	3.5	3	1	1	4	4	4	2	Squalene-hopene	cyclase	N-terminal	domain
TED_complement	PF07678.14	gi|284161420|ref|YP_003400043.1|	-	3e-07	29.8	0.9	0.037	13.1	0.0	3.9	2	1	3	5	5	5	3	A-macroglobulin	TED	domain
DUF3398	PF11878.8	gi|284161420|ref|YP_003400043.1|	-	0.04	14.3	0.1	0.093	13.2	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3398)
PGF-CTERM	PF18204.1	gi|284161420|ref|YP_003400043.1|	-	3.4	7.8	8.6	0.089	12.8	1.6	2.1	2	0	0	2	2	2	0	PGF-CTERM	motif
PQQ_3	PF13570.6	gi|284161421|ref|YP_003400044.1|	-	8.8e-32	108.8	30.8	6.4e-08	32.9	0.1	9.2	9	0	0	9	9	9	7	PQQ-like	domain
PQQ_2	PF13360.6	gi|284161421|ref|YP_003400044.1|	-	2.5e-20	73.1	0.0	1.6e-07	31.2	0.0	3.6	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.21	gi|284161421|ref|YP_003400044.1|	-	1.8e-10	40.2	17.9	0.45	10.5	0.0	8.6	7	1	0	7	7	7	4	PQQ	enzyme	repeat
DUF4430	PF14478.6	gi|284161421|ref|YP_003400044.1|	-	0.006	17.2	6.8	0.011	16.3	2.7	3.3	2	1	1	3	3	3	1	Domain	of	unknown	function	(DUF4430)
CobD_Cbib	PF03186.13	gi|284161422|ref|YP_003400045.1|	-	1.1e-81	274.2	0.0	1.3e-81	273.9	0.0	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
ECF_trnsprt	PF12822.7	gi|284161422|ref|YP_003400045.1|	-	0.024	14.7	3.4	0.028	14.5	0.1	2.3	1	1	1	2	2	2	0	ECF	transporter,	substrate-specific	component
CobS	PF02654.15	gi|284161423|ref|YP_003400046.1|	-	1.8e-34	119.8	12.4	2e-34	119.6	12.4	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
DUF2892	PF11127.8	gi|284161423|ref|YP_003400046.1|	-	0.74	9.9	0.1	0.74	9.9	0.1	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2892)
DUF805	PF05656.14	gi|284161423|ref|YP_003400046.1|	-	2.3	8.7	6.5	2.7	8.5	0.3	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF805)
HTH_24	PF13412.6	gi|284161424|ref|YP_003400047.1|	-	1.7e-08	33.9	0.0	2.6e-08	33.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|284161424|ref|YP_003400047.1|	-	1.1e-06	28.4	0.1	1.5e-06	28.0	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284161424|ref|YP_003400047.1|	-	5.6e-06	26.1	0.0	7e-06	25.8	0.0	1.1	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|284161424|ref|YP_003400047.1|	-	1.2e-05	25.2	0.0	1.5e-05	24.8	0.0	1.1	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|284161424|ref|YP_003400047.1|	-	6.3e-05	22.8	0.0	8.6e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	HTH	domain
HTH_IclR	PF09339.10	gi|284161424|ref|YP_003400047.1|	-	7.2e-05	22.5	0.0	9.1e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_27	PF13463.6	gi|284161424|ref|YP_003400047.1|	-	7.9e-05	23.1	0.0	9.7e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.19	gi|284161424|ref|YP_003400047.1|	-	0.00062	19.9	0.1	0.00096	19.3	0.1	1.3	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
FeoC	PF09012.10	gi|284161424|ref|YP_003400047.1|	-	0.00064	19.7	0.0	0.0008	19.4	0.0	1.1	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
RPA_C	PF08784.11	gi|284161424|ref|YP_003400047.1|	-	0.0013	19.4	0.0	0.0016	19.0	0.0	1.1	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
Rrf2	PF02082.20	gi|284161424|ref|YP_003400047.1|	-	0.0036	17.6	0.0	0.0042	17.4	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
PadR	PF03551.14	gi|284161424|ref|YP_003400047.1|	-	0.004	17.1	0.1	0.0063	16.5	0.1	1.4	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.9	gi|284161424|ref|YP_003400047.1|	-	0.0049	17.0	0.0	0.0059	16.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
IF2_N	PF04760.15	gi|284161424|ref|YP_003400047.1|	-	0.0052	16.6	0.1	0.009	15.8	0.1	1.4	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_23	PF13384.6	gi|284161424|ref|YP_003400047.1|	-	0.0077	16.0	0.0	0.011	15.6	0.0	1.2	1	0	0	1	1	1	1	Homeodomain-like	domain
B-block_TFIIIC	PF04182.12	gi|284161424|ref|YP_003400047.1|	-	0.0092	16.1	0.1	0.012	15.8	0.1	1.2	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
DUF4423	PF14394.6	gi|284161424|ref|YP_003400047.1|	-	0.011	15.5	0.0	0.012	15.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Glyco_tranf_2_4	PF13704.6	gi|284161424|ref|YP_003400047.1|	-	0.011	16.2	0.0	0.013	16.0	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
RcpB	PF16971.5	gi|284161424|ref|YP_003400047.1|	-	0.017	15.0	0.2	0.019	14.8	0.2	1.1	1	0	0	1	1	1	0	Rough	colony	protein	B,	tight	adherence	-	tad	-	subunit
HTH_20	PF12840.7	gi|284161424|ref|YP_003400047.1|	-	0.024	14.7	0.0	0.032	14.3	0.0	1.1	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161424|ref|YP_003400047.1|	-	0.029	14.2	0.0	0.039	13.8	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
TnsD	PF15978.5	gi|284161424|ref|YP_003400047.1|	-	0.04	12.9	0.0	0.042	12.8	0.0	1.1	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
Sigma70_r3	PF04539.16	gi|284161424|ref|YP_003400047.1|	-	0.048	13.8	0.0	0.063	13.4	0.0	1.2	1	0	0	1	1	1	0	Sigma-70	region	3
HTH_38	PF13936.6	gi|284161424|ref|YP_003400047.1|	-	0.053	13.3	0.0	0.081	12.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
MqsR_toxin	PF15723.5	gi|284161424|ref|YP_003400047.1|	-	0.059	13.7	0.1	0.069	13.5	0.1	1.2	1	0	0	1	1	1	0	Motility	quorum-sensing	regulator,	toxin	of	MqsA
Sigma70_r4	PF04545.16	gi|284161424|ref|YP_003400047.1|	-	0.06	12.9	0.0	0.085	12.4	0.0	1.2	1	0	0	1	1	1	0	Sigma-70,	region	4
HrcA_DNA-bdg	PF03444.15	gi|284161424|ref|YP_003400047.1|	-	0.062	13.0	0.0	0.082	12.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_41	PF14502.6	gi|284161424|ref|YP_003400047.1|	-	0.069	12.8	0.0	0.097	12.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|284161424|ref|YP_003400047.1|	-	0.074	13.0	0.0	0.082	12.9	0.0	1.1	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
PheRS_DBD1	PF18552.1	gi|284161424|ref|YP_003400047.1|	-	0.079	12.7	0.0	0.11	12.3	0.0	1.1	1	0	0	1	1	1	0	PheRS	DNA	binding	domain	1
HTH_34	PF13601.6	gi|284161424|ref|YP_003400047.1|	-	0.08	13.1	0.1	0.098	12.9	0.1	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF5403	PF17395.2	gi|284161424|ref|YP_003400047.1|	-	0.085	13.2	0.0	0.095	13.0	0.0	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5403)
HTH_47	PF16221.5	gi|284161424|ref|YP_003400047.1|	-	0.094	12.3	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	winged	helix-turn-helix
DUF3489	PF11994.8	gi|284161424|ref|YP_003400047.1|	-	0.1	12.7	0.0	0.14	12.2	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3489)
Sigma70_r4_2	PF08281.12	gi|284161424|ref|YP_003400047.1|	-	0.13	12.0	0.0	0.21	11.3	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_AsnC-type	PF13404.6	gi|284161424|ref|YP_003400047.1|	-	0.19	11.6	0.0	0.29	11.0	0.0	1.3	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
NTP_transf_3	PF12804.7	gi|284161425|ref|YP_003400048.1|	-	5.4e-19	69.1	0.0	7e-19	68.7	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|284161425|ref|YP_003400048.1|	-	3.6e-06	27.1	0.0	7e-06	26.1	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
CofC	PF01983.16	gi|284161425|ref|YP_003400048.1|	-	0.011	15.0	0.0	0.022	13.9	0.0	1.5	2	0	0	2	2	2	0	Guanylyl	transferase	CofC	like
UCR_14kD	PF02271.16	gi|284161426|ref|YP_003400049.1|	-	0.11	12.4	0.0	0.15	12.1	0.0	1.2	1	0	0	1	1	1	0	Ubiquinol-cytochrome	C	reductase	complex	14kD	subunit
CbiZ	PF01955.18	gi|284161427|ref|YP_003400050.1|	-	6.5e-40	137.3	0.4	7.5e-40	137.1	0.4	1.0	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
DUF2240	PF09999.9	gi|284161429|ref|YP_003400052.1|	-	2.6e-15	56.3	0.6	2.9e-15	56.1	0.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
DUF4287	PF14117.6	gi|284161429|ref|YP_003400052.1|	-	0.072	13.2	0.1	0.15	12.2	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4287)
HypD	PF01924.16	gi|284161430|ref|YP_003400053.1|	-	2.5e-135	451.1	0.0	2.9e-135	450.9	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
zf-RING_6	PF14835.6	gi|284161430|ref|YP_003400053.1|	-	1.6	8.7	4.6	7.9	6.4	0.1	2.4	2	0	0	2	2	2	0	zf-RING	of	BARD1-type	protein
HupF_HypC	PF01455.18	gi|284161431|ref|YP_003400054.1|	-	2.3e-29	101.3	0.1	2.5e-29	101.2	0.1	1.0	1	0	0	1	1	1	1	HupF/HypC	family
SRPRB	PF09439.10	gi|284161431|ref|YP_003400054.1|	-	0.089	12.2	0.0	0.1	12.0	0.0	1.0	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
YajC	PF02699.15	gi|284161431|ref|YP_003400054.1|	-	0.09	12.7	0.4	0.32	10.9	0.1	1.9	1	1	1	2	2	2	0	Preprotein	translocase	subunit
cobW	PF02492.19	gi|284161432|ref|YP_003400055.1|	-	5.6e-28	97.7	1.8	7.7e-28	97.3	1.8	1.2	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MeaB	PF03308.16	gi|284161432|ref|YP_003400055.1|	-	2.5e-08	33.2	3.2	3.1e-07	29.6	3.2	2.0	1	1	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
NTPase_1	PF03266.15	gi|284161432|ref|YP_003400055.1|	-	0.0035	17.3	0.1	0.0062	16.5	0.1	1.7	1	1	0	1	1	1	1	NTPase
ATPase_2	PF01637.18	gi|284161432|ref|YP_003400055.1|	-	0.011	15.6	0.3	0.016	15.2	0.3	1.6	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
TsaE	PF02367.17	gi|284161432|ref|YP_003400055.1|	-	0.013	15.5	0.4	0.13	12.3	0.1	2.3	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
MobB	PF03205.14	gi|284161432|ref|YP_003400055.1|	-	0.018	14.9	0.3	0.04	13.8	0.3	1.7	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DOT1	PF08123.13	gi|284161432|ref|YP_003400055.1|	-	0.029	13.9	0.2	0.086	12.4	0.1	1.8	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
AAA_16	PF13191.6	gi|284161432|ref|YP_003400055.1|	-	0.046	14.1	0.0	0.073	13.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|284161432|ref|YP_003400055.1|	-	0.05	13.9	0.0	0.1	12.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284161432|ref|YP_003400055.1|	-	0.1	12.3	0.0	0.15	11.8	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
HypA	PF01155.19	gi|284161433|ref|YP_003400056.1|	-	1e-26	93.1	3.8	1.1e-26	93.0	3.8	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc-ribbons_6	PF07191.12	gi|284161433|ref|YP_003400056.1|	-	0.01	15.8	0.5	0.016	15.2	0.5	1.3	1	0	0	1	1	1	0	zinc-ribbons
Jas	PF16135.5	gi|284161433|ref|YP_003400056.1|	-	0.035	14.3	2.1	0.058	13.6	2.1	1.5	1	1	0	1	1	1	0	TPL-binding	domain	in	jasmonate	signalling
Prok-RING_1	PF14446.6	gi|284161433|ref|YP_003400056.1|	-	0.043	13.7	6.2	0.069	13.1	6.2	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
ADK_lid	PF05191.14	gi|284161433|ref|YP_003400056.1|	-	0.23	11.5	3.1	2.2	8.4	0.1	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Rubredoxin_2	PF18073.1	gi|284161433|ref|YP_003400056.1|	-	0.25	11.1	4.9	0.36	10.6	4.9	1.2	1	0	0	1	1	1	0	Rubredoxin	metal	binding	domain
TPR_2	PF07719.17	gi|284161434|ref|YP_003400057.1|	-	2.9e-07	30.1	37.0	0.31	11.3	0.1	7.7	3	1	5	8	8	8	5	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|284161434|ref|YP_003400057.1|	-	3.5e-07	30.4	24.3	0.15	12.7	0.3	7.2	6	1	1	7	7	7	3	Tetratricopeptide	repeat
SNAP	PF14938.6	gi|284161434|ref|YP_003400057.1|	-	1.5e-06	27.9	23.3	1.8e-06	27.6	21.2	2.0	1	1	0	1	1	1	1	Soluble	NSF	attachment	protein,	SNAP
TPR_7	PF13176.6	gi|284161434|ref|YP_003400057.1|	-	2.5e-05	24.0	25.8	0.93	9.7	0.6	8.3	5	2	3	8	8	8	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|284161434|ref|YP_003400057.1|	-	3.7e-05	24.2	17.5	1	10.4	0.8	6.3	2	2	4	6	6	6	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|284161434|ref|YP_003400057.1|	-	6.6e-05	23.3	13.1	2.4	8.7	0.1	5.4	2	1	3	5	5	5	2	Tetratricopeptide	repeat
RPN7	PF10602.9	gi|284161434|ref|YP_003400057.1|	-	0.00017	21.4	16.2	0.29	10.8	1.5	4.5	3	2	1	5	5	5	3	26S	proteasome	subunit	RPN7
TPR_1	PF00515.28	gi|284161434|ref|YP_003400057.1|	-	0.0011	18.7	28.7	2.2	8.2	1.9	7.3	6	2	2	8	8	8	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|284161434|ref|YP_003400057.1|	-	0.0043	17.2	4.3	12	6.1	0.0	5.1	1	1	3	5	5	5	0	Tetratricopeptide	repeat
Clathrin	PF00637.20	gi|284161434|ref|YP_003400057.1|	-	0.073	13.0	12.3	0.41	10.5	0.8	3.4	1	1	2	3	3	3	0	Region	in	Clathrin	and	VPS
TPR_8	PF13181.6	gi|284161434|ref|YP_003400057.1|	-	0.13	12.5	32.4	0.99	9.8	0.1	7.0	5	1	2	7	7	7	0	Tetratricopeptide	repeat
BrkDBD	PF09607.10	gi|284161434|ref|YP_003400057.1|	-	0.14	12.0	0.1	0.14	12.0	0.1	2.0	2	0	0	2	2	1	0	Brinker	DNA-binding	domain
TPR_12	PF13424.6	gi|284161434|ref|YP_003400057.1|	-	0.16	12.2	17.8	1.5	9.2	0.3	4.7	3	2	1	4	4	4	0	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|284161434|ref|YP_003400057.1|	-	0.22	12.2	15.9	13	6.6	0.1	4.9	1	1	4	5	5	5	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|284161434|ref|YP_003400057.1|	-	0.48	10.9	5.9	50	4.6	0.0	5.7	5	3	2	7	7	7	0	Tetratricopeptide	repeat
DUF2749	PF10907.8	gi|284161434|ref|YP_003400057.1|	-	2.8	8.2	0.0	2.8	8.2	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2749)
AcylCoA_dehyd_C	PF12186.8	gi|284161434|ref|YP_003400057.1|	-	2.9	8.0	7.4	1.5	8.9	1.0	3.2	3	2	0	3	3	2	0	Acyl-CoA	dehydrogenase	C	terminal
DHR-2	PF06920.13	gi|284161434|ref|YP_003400057.1|	-	4.5	5.8	7.3	1.1	7.8	2.8	1.9	2	1	1	3	3	3	0	Dock	homology	region	2
SUR7	PF06687.12	gi|284161434|ref|YP_003400057.1|	-	5.3	6.6	13.6	8.2	6.0	13.6	1.3	1	0	0	1	1	1	0	SUR7/PalI	family
Sigma70_r4	PF04545.16	gi|284161435|ref|YP_003400058.1|	-	9.4e-05	21.9	0.0	0.00026	20.5	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4_2	PF08281.12	gi|284161435|ref|YP_003400058.1|	-	0.00023	20.8	0.4	0.0014	18.3	0.1	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_23	PF13384.6	gi|284161435|ref|YP_003400058.1|	-	0.00063	19.5	0.0	0.0021	17.8	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
DUF2795	PF11387.8	gi|284161435|ref|YP_003400058.1|	-	0.00085	19.5	0.0	0.002	18.3	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2795)
MTH865	PF07747.11	gi|284161435|ref|YP_003400058.1|	-	0.0013	18.4	0.0	0.024	14.4	0.0	2.4	2	0	0	2	2	2	1	MTH865-like	family
HTH_29	PF13551.6	gi|284161435|ref|YP_003400058.1|	-	0.0063	16.5	0.0	0.017	15.1	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
Phage_terminase	PF10668.9	gi|284161435|ref|YP_003400058.1|	-	0.027	14.5	0.1	0.085	12.9	0.0	1.9	2	0	0	2	2	2	0	Phage	terminase	small	subunit
HTH_11	PF08279.12	gi|284161435|ref|YP_003400058.1|	-	0.032	14.2	0.3	0.33	10.9	0.0	2.6	2	1	1	3	3	3	0	HTH	domain
GerE	PF00196.19	gi|284161435|ref|YP_003400058.1|	-	0.033	13.7	0.4	0.39	10.3	0.1	2.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_28	PF13518.6	gi|284161435|ref|YP_003400058.1|	-	0.062	13.4	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|284161435|ref|YP_003400058.1|	-	0.16	11.8	0.0	0.35	10.7	0.0	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_40	PF14493.6	gi|284161435|ref|YP_003400058.1|	-	0.17	12.3	4.8	1	9.9	1.9	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|284161435|ref|YP_003400058.1|	-	0.32	11.1	1.5	1.7	8.8	0.1	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
ATPase	PF06745.13	gi|284161436|ref|YP_003400059.1|	-	3.8e-67	226.0	0.1	4.4e-67	225.8	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|284161436|ref|YP_003400059.1|	-	7.5e-07	28.9	0.0	1.1e-06	28.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|284161436|ref|YP_003400059.1|	-	1.2e-05	24.8	0.1	1.8e-05	24.1	0.1	1.3	1	1	0	1	1	1	1	Rad51
IstB_IS21	PF01695.17	gi|284161436|ref|YP_003400059.1|	-	0.00018	21.3	0.1	0.00065	19.5	0.1	1.9	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
ArsA_ATPase	PF02374.15	gi|284161436|ref|YP_003400059.1|	-	0.00031	20.0	0.0	0.00041	19.6	0.0	1.2	1	0	0	1	1	1	1	Anion-transporting	ATPase
AAA_14	PF13173.6	gi|284161436|ref|YP_003400059.1|	-	0.0018	18.3	0.1	0.01	15.9	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284161436|ref|YP_003400059.1|	-	0.0053	17.0	0.0	0.0085	16.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|284161436|ref|YP_003400059.1|	-	0.0062	15.8	0.1	0.0073	15.6	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
MeaB	PF03308.16	gi|284161436|ref|YP_003400059.1|	-	0.011	14.8	0.0	0.021	13.8	0.0	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
ATPase_2	PF01637.18	gi|284161436|ref|YP_003400059.1|	-	0.012	15.6	0.3	0.019	14.9	0.3	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_24	PF13479.6	gi|284161436|ref|YP_003400059.1|	-	0.017	14.9	0.0	0.03	14.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CobU	PF02283.16	gi|284161436|ref|YP_003400059.1|	-	0.026	14.1	0.1	0.042	13.4	0.1	1.3	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
KTI12	PF08433.10	gi|284161436|ref|YP_003400059.1|	-	0.033	13.7	0.0	0.067	12.6	0.0	1.6	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA	PF00004.29	gi|284161436|ref|YP_003400059.1|	-	0.044	14.2	0.5	0.16	12.4	0.5	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TALPID3	PF15324.6	gi|284161436|ref|YP_003400059.1|	-	0.13	9.9	0.0	0.16	9.6	0.0	1.0	1	0	0	1	1	1	0	Hedgehog	signalling	target
Zn-ribbon_8	PF09723.10	gi|284161437|ref|YP_003400060.1|	-	8.2e-05	22.6	0.2	0.0003	20.8	0.2	1.7	1	1	0	1	1	1	1	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.11	gi|284161437|ref|YP_003400060.1|	-	0.00027	20.5	0.3	0.71	9.6	0.0	2.2	2	0	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|284161437|ref|YP_003400060.1|	-	0.0004	20.7	0.1	0.016	15.6	0.0	2.0	2	0	0	2	2	2	1	Restriction	alleviation	protein	Lar
DNA_RNApol_7kD	PF03604.13	gi|284161437|ref|YP_003400060.1|	-	0.00082	19.0	1.9	0.51	10.1	0.2	2.1	2	0	0	2	2	2	2	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.12	gi|284161437|ref|YP_003400060.1|	-	0.0049	16.4	0.6	0.83	9.2	0.1	2.1	2	0	0	2	2	2	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|284161437|ref|YP_003400060.1|	-	0.0088	15.4	1.0	0.98	8.9	0.2	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
DUF35_N	PF12172.8	gi|284161437|ref|YP_003400060.1|	-	0.0095	15.8	2.9	0.32	10.9	0.3	2.1	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.19	gi|284161437|ref|YP_003400060.1|	-	0.015	15.3	0.0	0.016	15.2	0.0	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_Tnp_IS1595	PF12760.7	gi|284161437|ref|YP_003400060.1|	-	0.026	14.5	2.5	0.49	10.4	0.1	2.1	1	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|284161437|ref|YP_003400060.1|	-	0.033	13.9	1.7	2.7	7.8	0.3	2.4	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
Cys_rich_CPXG	PF14255.6	gi|284161437|ref|YP_003400060.1|	-	0.049	13.5	0.4	7.1	6.6	0.0	2.1	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
DUF1178	PF06676.11	gi|284161437|ref|YP_003400060.1|	-	0.049	14.0	0.0	0.055	13.9	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1178)
zinc_ribbon_2	PF13240.6	gi|284161437|ref|YP_003400060.1|	-	0.075	12.8	2.9	3.2	7.6	0.7	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Herpes_UL49_1	PF03117.14	gi|284161437|ref|YP_003400060.1|	-	0.1	11.9	0.9	1.2	8.3	0.1	2.0	1	1	1	2	2	2	0	UL49	family
DpnI	PF06044.12	gi|284161437|ref|YP_003400060.1|	-	0.16	11.6	0.7	1.8	8.2	0.1	2.0	1	1	1	2	2	2	0	Dam-replacing	family
Cys_rich_KTR	PF14205.6	gi|284161437|ref|YP_003400060.1|	-	0.19	11.5	1.1	0.96	9.3	1.1	1.9	1	1	0	1	1	1	0	Cysteine-rich	KTR
DUF678	PF05077.12	gi|284161437|ref|YP_003400060.1|	-	0.23	11.6	0.9	2.3	8.4	0.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF678)
NOB1_Zn_bind	PF08772.11	gi|284161437|ref|YP_003400060.1|	-	0.32	11.2	2.4	3.3	7.9	2.5	2.0	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FdhE	PF04216.12	gi|284161437|ref|YP_003400060.1|	-	0.64	9.8	2.2	5	6.9	0.1	2.0	1	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
DUF61	PF01886.16	gi|284161438|ref|YP_003400061.1|	-	2.6e-39	134.2	1.4	2.9e-39	134.0	1.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
SAM_adeno_trans	PF01887.16	gi|284161439|ref|YP_003400062.1|	-	4.7e-74	248.8	0.0	5.3e-74	248.6	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
PIN_5	PF08745.11	gi|284161440|ref|YP_003400063.1|	-	7.3e-88	293.4	0.1	8.6e-88	293.2	0.1	1.0	1	0	0	1	1	1	1	PINc	domain	ribonuclease
PIN	PF01850.21	gi|284161440|ref|YP_003400063.1|	-	0.079	13.5	0.2	0.3	11.6	0.1	2.0	1	1	1	2	2	2	0	PIN	domain
LPG_synthase_TM	PF03706.13	gi|284161441|ref|YP_003400064.1|	-	9.3e-37	127.2	29.6	1.5e-36	126.5	28.3	1.9	1	1	1	2	2	2	1	Lysylphosphatidylglycerol	synthase	TM	region
Glycos_transf_2	PF00535.26	gi|284161441|ref|YP_003400064.1|	-	7e-30	104.1	0.1	1.1e-29	103.4	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284161441|ref|YP_003400064.1|	-	2.5e-07	30.8	0.0	4.5e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|284161441|ref|YP_003400064.1|	-	3.8e-06	27.3	0.1	7.8e-06	26.3	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|284161441|ref|YP_003400064.1|	-	0.00018	21.1	0.0	0.00028	20.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Lysine_decarbox	PF03641.14	gi|284161441|ref|YP_003400064.1|	-	0.14	12.2	0.1	0.27	11.3	0.1	1.4	1	0	0	1	1	1	0	Possible	lysine	decarboxylase
PG_binding_1	PF01471.18	gi|284161441|ref|YP_003400064.1|	-	0.18	12.0	0.0	0.41	10.9	0.0	1.6	1	0	0	1	1	1	0	Putative	peptidoglycan	binding	domain
P5CR_dimer	PF14748.6	gi|284161442|ref|YP_003400065.1|	-	7.3e-21	74.4	0.0	1.3e-20	73.6	0.0	1.4	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.17	gi|284161442|ref|YP_003400065.1|	-	2.3e-18	66.5	0.2	4.1e-18	65.7	0.2	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|284161442|ref|YP_003400065.1|	-	1.2e-08	35.3	0.0	2e-08	34.6	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|284161442|ref|YP_003400065.1|	-	1.9e-06	28.0	0.9	0.0004	20.4	0.9	2.2	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.18	gi|284161442|ref|YP_003400065.1|	-	2.1e-06	28.0	0.4	6.1e-06	26.5	0.1	1.9	2	0	0	2	2	2	1	TrkA-N	domain
ApbA	PF02558.16	gi|284161442|ref|YP_003400065.1|	-	1.4e-05	24.8	0.2	3.9e-05	23.3	0.2	1.7	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.27	gi|284161442|ref|YP_003400065.1|	-	0.00016	22.2	0.4	0.24	12.0	0.5	2.8	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|284161442|ref|YP_003400065.1|	-	0.0036	17.2	0.6	0.025	14.5	0.2	2.0	1	1	1	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|284161442|ref|YP_003400065.1|	-	0.0093	15.6	0.2	0.031	13.8	0.1	1.7	1	1	1	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Shikimate_DH	PF01488.20	gi|284161442|ref|YP_003400065.1|	-	0.013	15.5	0.0	0.022	14.8	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ADH_zinc_N	PF00107.26	gi|284161442|ref|YP_003400065.1|	-	0.014	15.4	0.0	0.026	14.5	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
UDPG_MGDP_dh_N	PF03721.14	gi|284161442|ref|YP_003400065.1|	-	0.028	14.0	0.1	0.066	12.8	0.1	1.6	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_10	PF13460.6	gi|284161442|ref|YP_003400065.1|	-	0.029	14.3	0.0	0.039	13.8	0.0	1.3	1	0	0	1	1	1	0	NAD(P)H-binding
Pyr_redox_2	PF07992.14	gi|284161442|ref|YP_003400065.1|	-	0.058	12.6	0.0	0.17	11.1	0.0	1.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.19	gi|284161442|ref|YP_003400065.1|	-	0.059	12.7	0.0	0.099	12.0	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|284161442|ref|YP_003400065.1|	-	0.07	13.4	0.1	0.14	12.4	0.1	1.6	1	1	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
CoA_binding	PF02629.19	gi|284161442|ref|YP_003400065.1|	-	0.081	13.6	0.2	0.24	12.1	0.2	1.8	1	1	0	1	1	1	0	CoA	binding	domain
HEM4	PF02602.15	gi|284161443|ref|YP_003400066.1|	-	2.5e-34	118.6	0.0	3.1e-34	118.3	0.0	1.1	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
Nitro_FeMo-Co	PF02579.17	gi|284161443|ref|YP_003400066.1|	-	0.0021	18.3	0.0	3	8.2	0.0	2.9	2	1	1	3	3	3	2	Dinitrogenase	iron-molybdenum	cofactor
SpoIIP	PF07454.11	gi|284161443|ref|YP_003400066.1|	-	0.04	13.4	0.0	1.1	8.7	0.0	2.1	2	0	0	2	2	2	0	Stage	II	sporulation	protein	P	(SpoIIP)
Baculo_19	PF04798.12	gi|284161443|ref|YP_003400066.1|	-	0.1	12.3	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	Baculovirus	19	kDa	protein	conserved	region
Glyco_transf_4	PF13439.6	gi|284161443|ref|YP_003400066.1|	-	0.15	12.0	0.1	36	4.3	0.1	3.2	1	1	1	3	3	3	0	Glycosyltransferase	Family	4
IMS_HHH	PF11798.8	gi|284161443|ref|YP_003400066.1|	-	0.16	12.3	0.2	2.4	8.7	0.1	2.8	3	0	0	3	3	3	0	IMS	family	HHH	motif
Lactamase_B_2	PF12706.7	gi|284161444|ref|YP_003400067.1|	-	8.8e-15	54.7	0.1	1.1e-14	54.4	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284161444|ref|YP_003400067.1|	-	1.8e-09	37.9	0.1	2.8e-09	37.3	0.1	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.6	gi|284161444|ref|YP_003400067.1|	-	2.3e-07	30.9	0.0	5e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
ArsA_ATPase	PF02374.15	gi|284161445|ref|YP_003400068.1|	-	6.6e-96	321.1	0.0	8e-96	320.8	0.0	1.1	1	0	0	1	1	1	1	Anion-transporting	ATPase
ArsA_HSP20	PF17886.1	gi|284161445|ref|YP_003400068.1|	-	3.3e-17	61.8	0.1	8.1e-17	60.5	0.1	1.7	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
AAA_31	PF13614.6	gi|284161445|ref|YP_003400068.1|	-	2.4e-12	47.1	0.0	5.8e-12	45.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|284161445|ref|YP_003400068.1|	-	4.4e-09	36.5	0.0	3.6e-08	33.5	0.0	2.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|284161445|ref|YP_003400068.1|	-	4.8e-05	22.9	2.2	0.00015	21.3	0.3	2.8	3	1	0	3	3	3	1	NUBPL	iron-transfer	P-loop	NTPase
ATPase	PF06745.13	gi|284161445|ref|YP_003400068.1|	-	0.0011	18.3	0.2	0.013	14.8	0.0	2.4	3	0	0	3	3	3	1	KaiC
CBP_BcsQ	PF06564.12	gi|284161445|ref|YP_003400068.1|	-	0.0012	18.4	0.0	0.0019	17.8	0.0	1.3	1	0	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
SRP54	PF00448.22	gi|284161445|ref|YP_003400068.1|	-	0.0019	17.9	0.3	0.018	14.7	0.4	2.1	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
Fer4_NifH	PF00142.18	gi|284161445|ref|YP_003400068.1|	-	0.0035	16.8	0.0	0.0086	15.5	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_24	PF13479.6	gi|284161445|ref|YP_003400068.1|	-	0.008	15.9	0.0	0.015	15.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|284161445|ref|YP_003400068.1|	-	0.014	14.8	0.0	0.026	14.0	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
RHSP	PF07999.11	gi|284161445|ref|YP_003400068.1|	-	0.02	13.8	0.0	0.031	13.1	0.0	1.2	1	0	0	1	1	1	0	Retrotransposon	hot	spot	protein
MeaB	PF03308.16	gi|284161445|ref|YP_003400068.1|	-	0.026	13.5	0.1	0.049	12.6	0.1	1.5	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_25	PF13481.6	gi|284161445|ref|YP_003400068.1|	-	0.03	13.9	0.8	0.051	13.1	0.3	1.6	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|284161445|ref|YP_003400068.1|	-	0.066	12.9	0.1	0.13	12.0	0.1	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|284161445|ref|YP_003400068.1|	-	0.074	13.5	0.0	0.16	12.4	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|284161445|ref|YP_003400068.1|	-	0.12	11.5	0.4	0.21	10.8	0.4	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_33	PF13671.6	gi|284161445|ref|YP_003400068.1|	-	0.12	12.5	0.0	0.23	11.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.20	gi|284161445|ref|YP_003400068.1|	-	0.12	12.2	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_18	PF13238.6	gi|284161445|ref|YP_003400068.1|	-	0.13	12.8	0.3	0.31	11.6	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|284161445|ref|YP_003400068.1|	-	0.16	12.3	0.0	0.24	11.8	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Radical_SAM	PF04055.21	gi|284161446|ref|YP_003400069.1|	-	4.8e-19	69.3	0.2	1.4e-18	67.8	0.1	1.7	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284161446|ref|YP_003400069.1|	-	5.3e-07	30.0	0.0	1e-06	29.1	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284161446|ref|YP_003400069.1|	-	1.2e-06	28.7	0.1	2.1e-06	27.8	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|284161446|ref|YP_003400069.1|	-	1.7e-05	25.2	0.4	4.7e-05	23.8	0.4	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
eIF2_C	PF09173.11	gi|284161447|ref|YP_003400070.1|	-	1.1e-33	115.3	1.9	2.5e-33	114.2	1.9	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU	PF00009.27	gi|284161447|ref|YP_003400070.1|	-	7.5e-29	100.7	3.3	1.9e-28	99.4	1.3	2.3	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|284161447|ref|YP_003400070.1|	-	9.1e-09	35.6	0.2	5.9e-08	33.0	0.4	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|284161447|ref|YP_003400070.1|	-	9.5e-05	22.5	0.0	0.00021	21.3	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|284161447|ref|YP_003400070.1|	-	0.00029	20.8	0.2	0.002	18.1	0.2	2.0	2	0	0	2	2	2	1	RsgA	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|284161447|ref|YP_003400070.1|	-	0.0019	18.2	0.2	0.0051	16.8	0.2	1.6	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
FeoB_N	PF02421.18	gi|284161447|ref|YP_003400070.1|	-	0.0028	17.2	0.4	1.4	8.4	0.2	2.5	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
PduV-EutP	PF10662.9	gi|284161447|ref|YP_003400070.1|	-	0.012	15.4	1.2	2.5	7.9	0.4	2.6	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
PIN_9	PF18477.1	gi|284161448|ref|YP_003400071.1|	-	2.1e-28	98.9	0.1	2.5e-28	98.7	0.1	1.0	1	0	0	1	1	1	1	PIN	like	domain
PIN_4	PF13638.6	gi|284161448|ref|YP_003400071.1|	-	7.7e-09	35.9	0.5	0.0001	22.6	0.0	2.1	1	1	1	2	2	2	2	PIN	domain
PIN	PF01850.21	gi|284161448|ref|YP_003400071.1|	-	1.2e-07	32.3	0.8	0.0016	18.9	0.2	2.1	1	1	1	2	2	2	2	PIN	domain
PIN_5	PF08745.11	gi|284161448|ref|YP_003400071.1|	-	0.00064	19.2	0.2	0.063	12.7	0.0	2.1	1	1	1	2	2	2	2	PINc	domain	ribonuclease
PIN_8	PF18476.1	gi|284161448|ref|YP_003400071.1|	-	0.0019	18.1	0.5	0.015	15.2	0.1	1.9	1	1	1	2	2	2	1	PIN	like	domain
PIN_12	PF16289.5	gi|284161448|ref|YP_003400071.1|	-	0.0097	16.4	0.3	0.016	15.7	0.3	1.3	1	1	0	1	1	1	1	PIN	domain
DUF5615	PF18480.1	gi|284161448|ref|YP_003400071.1|	-	0.01	15.6	0.0	0.023	14.4	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5615)
DUF4411	PF14367.6	gi|284161448|ref|YP_003400071.1|	-	0.013	15.4	0.1	0.097	12.6	0.1	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
PIN_2	PF10130.9	gi|284161448|ref|YP_003400071.1|	-	0.016	15.4	0.1	0.21	11.8	0.0	2.0	1	1	1	2	2	2	0	PIN	domain
PIN_10	PF18478.1	gi|284161448|ref|YP_003400071.1|	-	0.085	13.1	0.0	0.15	12.3	0.0	1.4	1	0	0	1	1	1	0	PIN	like	domain
RNase_Zc3h12a	PF11977.8	gi|284161448|ref|YP_003400071.1|	-	0.13	12.1	0.1	0.27	11.0	0.0	1.7	1	1	1	2	2	2	0	Zc3h12a-like	Ribonuclease	NYN	domain
DUF429	PF04250.13	gi|284161449|ref|YP_003400072.1|	-	2.9e-08	33.7	0.0	6.5e-07	29.4	0.0	2.2	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
HD	PF01966.22	gi|284161450|ref|YP_003400073.1|	-	6.8e-14	52.1	0.5	6.8e-14	52.1	0.5	1.6	2	0	0	2	2	2	1	HD	domain
HD_2	PF12917.7	gi|284161450|ref|YP_003400073.1|	-	7.2e-05	22.6	0.5	0.00018	21.4	0.5	1.7	1	1	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
HDOD	PF08668.12	gi|284161450|ref|YP_003400073.1|	-	0.00042	19.9	0.0	0.00077	19.0	0.0	1.5	1	1	0	1	1	1	1	HDOD	domain
Rep_3	PF01051.21	gi|284161450|ref|YP_003400073.1|	-	0.027	14.3	0.9	0.15	11.9	0.3	2.1	2	1	0	2	2	2	0	Initiator	Replication	protein
DUF3418	PF11898.8	gi|284161450|ref|YP_003400073.1|	-	0.051	12.2	0.0	5.5	5.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3418)
SopE_GEF	PF07487.13	gi|284161450|ref|YP_003400073.1|	-	0.078	13.1	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	SopE	GEF	domain
SUI1	PF01253.22	gi|284161451|ref|YP_003400074.1|	-	1e-21	77.2	3.2	1.3e-21	76.9	3.2	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.14	gi|284161451|ref|YP_003400074.1|	-	1.1e-06	28.8	0.9	1.5e-06	28.4	0.9	1.3	1	0	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DTW	PF03942.15	gi|284161451|ref|YP_003400074.1|	-	0.033	13.9	0.6	0.043	13.5	0.6	1.2	1	0	0	1	1	1	0	DTW	domain
PG_binding_4	PF12229.8	gi|284161451|ref|YP_003400074.1|	-	0.065	13.5	0.1	0.093	13.0	0.1	1.3	1	0	0	1	1	1	0	Putative	peptidoglycan	binding	domain
PseudoU_synth_1	PF01416.20	gi|284161452|ref|YP_003400075.1|	-	4.1e-33	114.1	0.0	7.3e-27	94.0	0.0	2.2	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
LMWPc	PF01451.21	gi|284161453|ref|YP_003400076.1|	-	7.9e-26	91.1	0.1	1.9e-24	86.7	0.1	2.0	1	1	0	1	1	1	1	Low	molecular	weight	phosphotyrosine	protein	phosphatase
PTS_IIB	PF02302.17	gi|284161453|ref|YP_003400076.1|	-	0.0026	18.4	0.1	1.1	10.0	0.1	2.2	1	1	1	2	2	2	2	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
Acetyltransf_4	PF13420.7	gi|284161453|ref|YP_003400076.1|	-	0.12	12.5	0.0	0.25	11.5	0.0	1.5	1	1	1	2	2	2	0	Acetyltransferase	(GNAT)	domain
ABC_tran	PF00005.27	gi|284161454|ref|YP_003400077.1|	-	8.7e-20	71.6	0.1	2.1e-19	70.4	0.1	1.7	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161454|ref|YP_003400077.1|	-	3.5e-10	40.2	0.1	0.00015	21.7	0.1	2.4	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161454|ref|YP_003400077.1|	-	2.4e-05	23.9	0.3	0.00028	20.4	0.4	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Acetyltransf_1	PF00583.25	gi|284161454|ref|YP_003400077.1|	-	0.00019	21.7	0.0	0.00056	20.1	0.0	1.9	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|284161454|ref|YP_003400077.1|	-	0.00032	21.0	0.0	0.00084	19.7	0.0	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AAA_23	PF13476.6	gi|284161454|ref|YP_003400077.1|	-	0.00048	20.7	0.0	0.00088	19.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Acetyltransf_10	PF13673.7	gi|284161454|ref|YP_003400077.1|	-	0.0015	18.5	0.0	0.0032	17.4	0.0	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AAA_16	PF13191.6	gi|284161454|ref|YP_003400077.1|	-	0.0016	18.9	0.0	0.0033	17.8	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
HypA	PF01155.19	gi|284161454|ref|YP_003400077.1|	-	0.0021	18.1	0.6	0.0067	16.4	0.6	1.8	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
AAA_22	PF13401.6	gi|284161454|ref|YP_003400077.1|	-	0.0023	18.2	0.1	0.0069	16.7	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
zinc_ribbon_2	PF13240.6	gi|284161454|ref|YP_003400077.1|	-	0.0025	17.4	4.0	0.0052	16.5	4.0	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|284161454|ref|YP_003400077.1|	-	0.0038	17.4	0.1	0.0074	16.4	0.1	1.5	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
AAA_25	PF13481.6	gi|284161454|ref|YP_003400077.1|	-	0.0039	16.8	0.3	0.023	14.3	0.3	2.2	1	1	0	1	1	1	1	AAA	domain
Zn-ribbon_8	PF09723.10	gi|284161454|ref|YP_003400077.1|	-	0.0058	16.7	1.2	0.015	15.4	1.2	1.7	1	0	0	1	1	1	1	Zinc	ribbon	domain
AAA_29	PF13555.6	gi|284161454|ref|YP_003400077.1|	-	0.009	15.7	0.0	0.019	14.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
zf-TFIIB	PF13453.6	gi|284161454|ref|YP_003400077.1|	-	0.0098	15.2	2.3	1.2	8.6	0.2	2.7	3	0	0	3	3	2	1	Transcription	factor	zinc-finger
RsgA_GTPase	PF03193.16	gi|284161454|ref|YP_003400077.1|	-	0.021	14.7	0.0	0.045	13.7	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_30	PF13604.6	gi|284161454|ref|YP_003400077.1|	-	0.022	14.5	1.1	0.12	12.1	1.1	2.0	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|284161454|ref|YP_003400077.1|	-	0.033	14.1	0.1	0.063	13.2	0.1	1.6	1	1	0	1	1	1	0	NACHT	domain
GNAT_acetyltr_2	PF13718.6	gi|284161454|ref|YP_003400077.1|	-	0.06	12.7	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
DUF4379	PF14311.6	gi|284161454|ref|YP_003400077.1|	-	0.061	13.7	0.9	0.18	12.2	0.9	1.8	1	0	0	1	1	1	0	Probable	Zinc-ribbon	domain
TackOD1	PF18551.1	gi|284161454|ref|YP_003400077.1|	-	0.065	12.9	0.1	0.14	11.9	0.1	1.4	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
PRK	PF00485.18	gi|284161454|ref|YP_003400077.1|	-	0.07	12.9	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
NB-ARC	PF00931.22	gi|284161454|ref|YP_003400077.1|	-	0.07	12.3	0.2	0.32	10.1	0.2	2.0	1	1	0	1	1	1	0	NB-ARC	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161454|ref|YP_003400077.1|	-	0.074	13.0	0.1	2.6	8.1	0.0	2.6	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
DUF3584	PF12128.8	gi|284161454|ref|YP_003400077.1|	-	0.076	10.5	0.0	0.11	10.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
MMR_HSR1	PF01926.23	gi|284161454|ref|YP_003400077.1|	-	0.077	13.1	0.1	0.22	11.6	0.1	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
zinc-ribbons_6	PF07191.12	gi|284161454|ref|YP_003400077.1|	-	0.082	12.9	0.6	0.17	11.9	0.6	1.4	1	0	0	1	1	1	0	zinc-ribbons
AAA	PF00004.29	gi|284161454|ref|YP_003400077.1|	-	0.1	13.0	0.1	0.33	11.4	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DZR	PF12773.7	gi|284161454|ref|YP_003400077.1|	-	0.11	12.6	0.9	0.21	11.6	0.9	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
Desulfoferrod_N	PF06397.12	gi|284161454|ref|YP_003400077.1|	-	0.12	12.0	4.0	1.4	8.6	4.0	2.5	1	1	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
AAA_28	PF13521.6	gi|284161454|ref|YP_003400077.1|	-	0.12	12.6	0.8	0.51	10.6	0.4	2.1	2	0	0	2	2	2	0	AAA	domain
zf-ribbon_3	PF13248.6	gi|284161454|ref|YP_003400077.1|	-	0.17	11.3	2.5	0.41	10.1	2.5	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
AAA_15	PF13175.6	gi|284161454|ref|YP_003400077.1|	-	0.17	11.5	0.0	0.47	10.1	0.0	1.7	1	1	1	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|284161454|ref|YP_003400077.1|	-	0.18	12.0	0.3	0.48	10.6	0.3	1.7	1	0	0	1	1	1	0	AAA	domain
TF_Zn_Ribbon	PF08271.12	gi|284161454|ref|YP_003400077.1|	-	0.28	10.7	2.2	14	5.3	0.2	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
NCD3G	PF07562.14	gi|284161454|ref|YP_003400077.1|	-	0.29	11.2	2.0	0.54	10.3	2.0	1.4	1	0	0	1	1	1	0	Nine	Cysteines	Domain	of	family	3	GPCR
HalOD2	PF18547.1	gi|284161454|ref|YP_003400077.1|	-	0.79	9.7	2.6	1.8	8.5	0.3	2.3	1	1	1	2	2	2	0	Halobacterial	output	domain	2
zf-ACC	PF17848.1	gi|284161454|ref|YP_003400077.1|	-	1	9.5	5.2	13	6.0	0.2	3.0	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
YdjO	PF14169.6	gi|284161454|ref|YP_003400077.1|	-	2.5	7.9	4.9	13	5.6	4.9	2.0	1	1	0	1	1	1	0	Cold-inducible	protein	YdjO
ASCH	PF04266.14	gi|284161455|ref|YP_003400078.1|	-	2.9e-11	43.9	1.0	3.5e-11	43.6	1.0	1.1	1	0	0	1	1	1	1	ASCH	domain
Sdh5	PF03937.16	gi|284161455|ref|YP_003400078.1|	-	0.0015	18.5	0.0	0.0021	18.0	0.0	1.1	1	0	0	1	1	1	1	Flavinator	of	succinate	dehydrogenase
AAA_17	PF13207.6	gi|284161456|ref|YP_003400079.1|	-	2.6e-20	73.2	0.5	2.6e-20	73.2	0.5	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|284161456|ref|YP_003400079.1|	-	2.4e-13	50.8	0.2	7.5e-13	49.2	0.0	1.8	1	1	1	2	2	2	1	AAA	domain
RNA_binding	PF01877.17	gi|284161456|ref|YP_003400079.1|	-	3e-13	50.1	5.3	8.5e-13	48.6	1.6	2.9	2	1	0	2	2	2	1	RNA	binding
AAA_33	PF13671.6	gi|284161456|ref|YP_003400079.1|	-	4.1e-05	23.8	0.0	0.0002	21.6	0.0	2.2	2	2	0	2	2	2	1	AAA	domain
Cytidylate_kin2	PF13189.6	gi|284161456|ref|YP_003400079.1|	-	0.012	15.7	4.4	0.45	10.6	2.6	2.7	1	1	0	1	1	1	0	Cytidylate	kinase-like	family
AAA_15	PF13175.6	gi|284161456|ref|YP_003400079.1|	-	0.014	15.1	0.5	0.024	14.4	0.5	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
ADK	PF00406.22	gi|284161456|ref|YP_003400079.1|	-	0.035	14.2	0.4	0.078	13.1	0.3	1.9	1	1	0	1	1	1	0	Adenylate	kinase
SRP54	PF00448.22	gi|284161456|ref|YP_003400079.1|	-	0.068	12.8	0.5	6.7	6.3	0.1	2.5	2	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
HD_3	PF13023.6	gi|284161457|ref|YP_003400080.1|	-	4.1e-19	69.1	1.2	5.6e-18	65.4	1.2	2.0	1	1	0	1	1	1	1	HD	domain
HD_2	PF12917.7	gi|284161457|ref|YP_003400080.1|	-	2e-10	40.7	0.9	1.3e-09	38.1	0.9	1.9	1	1	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
HDOD	PF08668.12	gi|284161457|ref|YP_003400080.1|	-	0.0017	17.9	0.0	0.0022	17.5	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
DUF1391	PF07151.12	gi|284161457|ref|YP_003400080.1|	-	0.057	13.2	0.2	0.11	12.3	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1391)
HD	PF01966.22	gi|284161457|ref|YP_003400080.1|	-	0.066	13.4	1.2	0.11	12.7	1.2	1.6	1	1	0	1	1	1	0	HD	domain
DUF4248	PF14053.6	gi|284161457|ref|YP_003400080.1|	-	0.079	13.0	0.1	4.2	7.5	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4248)
Mut7-C	PF01927.16	gi|284161458|ref|YP_003400081.1|	-	2.9e-36	124.8	0.3	3.3e-36	124.6	0.3	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
DUF5615	PF18480.1	gi|284161458|ref|YP_003400081.1|	-	0.041	13.7	0.0	0.11	12.3	0.0	1.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5615)
zf-TFIIB	PF13453.6	gi|284161458|ref|YP_003400081.1|	-	0.23	10.8	1.9	2.3	7.6	1.9	2.5	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-met	PF12874.7	gi|284161458|ref|YP_003400081.1|	-	0.53	10.7	2.7	17	5.9	0.4	2.7	3	0	0	3	3	3	0	Zinc-finger	of	C2H2	type
HhH-GPD	PF00730.25	gi|284161459|ref|YP_003400082.1|	-	1e-26	93.5	0.0	1.6e-26	92.8	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|284161459|ref|YP_003400082.1|	-	6.8e-09	35.1	3.1	1.1e-08	34.5	0.0	2.7	3	1	1	4	4	4	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|284161459|ref|YP_003400082.1|	-	7.9e-05	23.2	0.3	0.29	11.8	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	domain
EndIII_4Fe-2S	PF10576.9	gi|284161459|ref|YP_003400082.1|	-	0.00086	19.6	4.0	0.0014	18.9	4.0	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
DUF2400	PF09674.10	gi|284161459|ref|YP_003400082.1|	-	0.0092	16.0	0.0	0.31	11.0	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2400)
eIF-5_eIF-2B	PF01873.17	gi|284161460|ref|YP_003400083.1|	-	4e-40	136.3	0.2	4.6e-40	136.1	0.2	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
rRNA_proc-arch	PF13234.6	gi|284161460|ref|YP_003400083.1|	-	0.00049	20.1	0.6	0.00057	19.9	0.6	1.2	1	0	0	1	1	1	1	rRNA-processing	arch	domain
DZR	PF12773.7	gi|284161460|ref|YP_003400083.1|	-	0.0057	16.6	0.1	0.0089	16.0	0.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Lar_restr_allev	PF14354.6	gi|284161460|ref|YP_003400083.1|	-	0.0084	16.5	1.7	0.48	10.8	0.1	2.3	1	1	1	2	2	2	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.12	gi|284161460|ref|YP_003400083.1|	-	0.018	14.5	0.3	0.036	13.6	0.3	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
Lenti_VIF_2	PF07401.12	gi|284161460|ref|YP_003400083.1|	-	0.049	13.0	0.0	0.053	12.9	0.0	1.1	1	0	0	1	1	1	0	Bovine	Lentivirus	VIF	protein
DNA_RNApol_7kD	PF03604.13	gi|284161460|ref|YP_003400083.1|	-	0.052	13.2	6.3	0.3	10.8	6.0	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
GATA	PF00320.27	gi|284161460|ref|YP_003400083.1|	-	0.057	13.0	0.6	0.097	12.3	0.2	1.7	2	0	0	2	2	2	0	GATA	zinc	finger
Elf1	PF05129.13	gi|284161460|ref|YP_003400083.1|	-	0.064	13.3	0.2	0.13	12.3	0.2	1.5	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
CbiJ	PF02571.14	gi|284161460|ref|YP_003400083.1|	-	0.073	12.5	0.0	0.26	10.7	0.0	1.8	1	1	1	2	2	2	0	Precorrin-6x	reductase	CbiJ/CobK
Prok-RING_1	PF14446.6	gi|284161460|ref|YP_003400083.1|	-	0.1	12.5	0.3	2	8.4	0.1	2.2	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zinc_ribbon_4	PF13717.6	gi|284161460|ref|YP_003400083.1|	-	0.11	12.5	3.1	0.74	9.8	3.1	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|284161460|ref|YP_003400083.1|	-	0.12	11.8	1.1	10	5.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.19	gi|284161460|ref|YP_003400083.1|	-	0.12	12.4	1.7	2.2	8.3	1.7	2.5	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_2	PF13240.6	gi|284161460|ref|YP_003400083.1|	-	0.13	12.0	1.1	16	5.4	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|284161460|ref|YP_003400083.1|	-	0.14	11.9	2.3	2.7	7.8	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
PHD_3	PF13922.6	gi|284161460|ref|YP_003400083.1|	-	0.15	12.5	0.6	14	6.2	0.0	2.3	2	0	0	2	2	2	0	PHD	domain	of	transcriptional	enhancer,	Asx
zf_C2H2_13	PF18508.1	gi|284161460|ref|YP_003400083.1|	-	0.87	9.2	2.6	0.96	9.1	0.1	2.1	2	0	0	2	2	2	0	Zinc	finger	domain
zf-CCHC_6	PF15288.6	gi|284161460|ref|YP_003400083.1|	-	1	9.3	4.4	12	5.8	0.5	2.4	2	0	0	2	2	2	0	Zinc	knuckle
DUF35_N	PF12172.8	gi|284161460|ref|YP_003400083.1|	-	9.7	6.2	7.3	4.8	7.1	0.4	2.7	2	1	1	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF424	PF04242.13	gi|284161461|ref|YP_003400084.1|	-	7.9e-31	106.2	0.6	8.7e-31	106.1	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
Phage_XkdX	PF09693.10	gi|284161461|ref|YP_003400084.1|	-	0.29	11.2	1.8	7.6	6.6	0.0	3.2	3	1	1	4	4	4	0	Phage	uncharacterised	protein	(Phage_XkdX)
ResIII	PF04851.15	gi|284161462|ref|YP_003400085.1|	-	8.8e-27	94.2	0.1	6.9e-26	91.3	0.0	2.4	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|284161462|ref|YP_003400085.1|	-	9.6e-17	61.3	0.0	1.5e-15	57.4	0.0	2.5	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|284161462|ref|YP_003400085.1|	-	3.3e-15	56.4	0.3	3.4e-13	49.9	0.0	2.9	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ERCC3_RAD25_C	PF16203.5	gi|284161462|ref|YP_003400085.1|	-	0.00014	21.2	0.1	0.00025	20.3	0.1	1.3	1	0	0	1	1	1	1	ERCC3/RAD25/XPB	C-terminal	helicase
AAA_30	PF13604.6	gi|284161462|ref|YP_003400085.1|	-	0.00044	20.0	0.0	0.00086	19.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.6	gi|284161462|ref|YP_003400085.1|	-	0.0035	17.2	0.9	0.84	9.4	0.0	3.0	2	1	1	3	3	3	1	AAA	domain
2-Hacid_dh	PF00389.30	gi|284161462|ref|YP_003400085.1|	-	0.0066	16.1	0.0	0.022	14.4	0.0	1.9	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
DUF2075	PF09848.9	gi|284161462|ref|YP_003400085.1|	-	0.052	12.8	0.0	0.091	12.0	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_19	PF13245.6	gi|284161462|ref|YP_003400085.1|	-	0.059	13.7	0.0	0.12	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|284161462|ref|YP_003400085.1|	-	0.07	12.6	0.0	0.16	11.4	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
AAA_22	PF13401.6	gi|284161462|ref|YP_003400085.1|	-	0.14	12.4	0.0	0.46	10.7	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
SWI2_SNF2	PF18766.1	gi|284161462|ref|YP_003400085.1|	-	0.16	11.6	0.0	0.43	10.2	0.0	1.7	1	0	0	1	1	1	0	SWI2/SNF2	ATPase
AP_endonuc_2	PF01261.24	gi|284161463|ref|YP_003400086.1|	-	1e-07	31.6	0.0	1.3e-07	31.3	0.0	1.2	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
Methyltr_RsmB-F	PF01189.17	gi|284161464|ref|YP_003400087.1|	-	3.6e-45	154.1	0.0	6.2e-45	153.3	0.0	1.4	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
NusB	PF01029.18	gi|284161464|ref|YP_003400087.1|	-	1.7e-14	54.2	0.8	4.3e-14	52.9	0.8	1.6	1	0	0	1	1	1	1	NusB	family
Methyltransf_31	PF13847.6	gi|284161464|ref|YP_003400087.1|	-	2.3e-10	40.5	0.2	1.2e-09	38.1	0.0	2.2	3	0	0	3	3	3	1	Methyltransferase	domain
PCMT	PF01135.19	gi|284161464|ref|YP_003400087.1|	-	1.2e-06	28.5	0.0	3.6e-06	26.9	0.0	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.6	gi|284161464|ref|YP_003400087.1|	-	8.3e-06	26.4	0.7	0.0003	21.5	0.1	3.3	3	1	0	3	3	2	1	Methyltransferase	domain
Methyltr_RsmF_N	PF17125.5	gi|284161464|ref|YP_003400087.1|	-	9.4e-06	26.0	0.0	2.1e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
Ubie_methyltran	PF01209.18	gi|284161464|ref|YP_003400087.1|	-	1.7e-05	24.3	0.1	0.0045	16.3	0.0	2.5	2	0	0	2	2	2	2	ubiE/COQ5	methyltransferase	family
MTS	PF05175.14	gi|284161464|ref|YP_003400087.1|	-	0.00012	21.7	0.2	0.0043	16.6	0.0	2.5	3	0	0	3	3	3	1	Methyltransferase	small	domain
Fibrillarin	PF01269.17	gi|284161464|ref|YP_003400087.1|	-	0.00076	18.7	0.3	0.0049	16.0	0.0	2.1	2	0	0	2	2	2	1	Fibrillarin
Methyltransf_11	PF08241.12	gi|284161464|ref|YP_003400087.1|	-	0.0016	19.1	0.7	0.68	10.6	0.0	3.5	4	0	0	4	4	4	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|284161464|ref|YP_003400087.1|	-	0.0032	17.4	0.5	0.45	10.4	0.1	2.6	2	0	0	2	2	2	1	Methyltransferase	domain
Cullin_Nedd8	PF10557.9	gi|284161464|ref|YP_003400087.1|	-	0.017	15.1	2.1	0.88	9.7	0.0	3.2	3	0	0	3	3	3	0	Cullin	protein	neddylation	domain
DUF938	PF06080.12	gi|284161464|ref|YP_003400087.1|	-	0.034	13.9	0.0	0.056	13.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
VanY	PF02557.17	gi|284161464|ref|YP_003400087.1|	-	0.046	13.5	0.4	2	8.2	0.2	2.9	1	1	1	2	2	2	0	D-alanyl-D-alanine	carboxypeptidase
Gallidermin	PF02052.15	gi|284161464|ref|YP_003400087.1|	-	0.051	13.9	0.1	0.12	12.7	0.1	1.6	1	0	0	1	1	1	0	Gallidermin
DUF4870	PF09685.10	gi|284161465|ref|YP_003400088.1|	-	1.7e-07	31.3	3.1	2e-07	31.1	3.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4870)
TIC20	PF16166.5	gi|284161465|ref|YP_003400088.1|	-	0.017	14.9	0.3	0.018	14.8	0.3	1.2	1	0	0	1	1	1	0	Chloroplast	import	apparatus	Tic20-like
Thymidylate_kin	PF02223.17	gi|284161466|ref|YP_003400089.1|	-	6.6e-55	185.7	0.2	7.6e-55	185.5	0.2	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
dNK	PF01712.19	gi|284161466|ref|YP_003400089.1|	-	2e-12	47.4	0.9	4.9e-06	26.6	0.3	2.1	2	0	0	2	2	2	2	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|284161466|ref|YP_003400089.1|	-	2.5e-09	37.8	0.2	1.5e-08	35.3	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|284161466|ref|YP_003400089.1|	-	7.2e-08	32.9	0.0	9.3e-08	32.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|284161466|ref|YP_003400089.1|	-	8.2e-07	29.5	0.4	1.5e-06	28.6	0.1	1.6	2	0	0	2	2	1	1	AAA	domain
PPK2	PF03976.14	gi|284161466|ref|YP_003400089.1|	-	1.3e-06	28.1	0.3	1.5e-05	24.6	0.0	2.6	1	1	2	3	3	3	1	Polyphosphate	kinase	2	(PPK2)
AAA_33	PF13671.6	gi|284161466|ref|YP_003400089.1|	-	2.6e-05	24.4	0.0	0.0001	22.5	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.14	gi|284161466|ref|YP_003400089.1|	-	7.2e-05	22.7	0.0	0.00021	21.2	0.0	1.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Herpes_TK	PF00693.18	gi|284161466|ref|YP_003400089.1|	-	0.00058	19.2	0.1	0.015	14.5	0.0	2.0	2	0	0	2	2	2	1	Thymidine	kinase	from	herpesvirus
NTPase_1	PF03266.15	gi|284161466|ref|YP_003400089.1|	-	0.001	19.0	1.9	0.0017	18.3	0.1	2.1	2	2	1	3	3	3	1	NTPase
SKI	PF01202.22	gi|284161466|ref|YP_003400089.1|	-	0.0016	18.6	0.6	1.8	8.7	0.0	2.4	2	1	0	2	2	2	2	Shikimate	kinase
ATPase	PF06745.13	gi|284161466|ref|YP_003400089.1|	-	0.0017	17.7	0.3	0.7	9.2	0.0	2.2	2	0	0	2	2	2	2	KaiC
CbiA	PF01656.23	gi|284161466|ref|YP_003400089.1|	-	0.002	18.2	0.0	0.0028	17.7	0.0	1.5	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.6	gi|284161466|ref|YP_003400089.1|	-	0.0027	18.0	0.0	0.0082	16.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.22	gi|284161466|ref|YP_003400089.1|	-	0.0035	16.6	0.8	0.0084	15.3	0.0	1.8	2	0	0	2	2	2	1	NB-ARC	domain
ADK	PF00406.22	gi|284161466|ref|YP_003400089.1|	-	0.0038	17.3	0.1	0.048	13.8	0.1	2.1	1	1	0	1	1	1	1	Adenylate	kinase
AAA_16	PF13191.6	gi|284161466|ref|YP_003400089.1|	-	0.0039	17.6	0.0	0.0047	17.3	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|284161466|ref|YP_003400089.1|	-	0.0058	16.7	2.2	0.015	15.4	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
CLP1_P	PF16575.5	gi|284161466|ref|YP_003400089.1|	-	0.0059	16.4	0.2	0.5	10.1	0.0	2.6	2	1	0	2	2	2	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
KTI12	PF08433.10	gi|284161466|ref|YP_003400089.1|	-	0.0061	16.0	0.1	0.018	14.5	0.1	1.9	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
Arg_repressor	PF01316.21	gi|284161466|ref|YP_003400089.1|	-	0.0082	15.9	0.1	0.44	10.3	0.1	2.6	2	0	0	2	2	2	1	Arginine	repressor,	DNA	binding	domain
NACHT	PF05729.12	gi|284161466|ref|YP_003400089.1|	-	0.0085	16.0	0.0	0.019	14.9	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA	PF00004.29	gi|284161466|ref|YP_003400089.1|	-	0.0095	16.4	0.2	0.036	14.5	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.6	gi|284161466|ref|YP_003400089.1|	-	0.01	15.6	0.0	0.016	14.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.17	gi|284161466|ref|YP_003400089.1|	-	0.017	15.2	2.9	0.15	12.2	2.9	2.6	1	1	0	1	1	1	0	Helicase	HerA,	central	domain
ABC_tran	PF00005.27	gi|284161466|ref|YP_003400089.1|	-	0.02	15.4	0.0	0.022	15.3	0.0	1.4	1	1	0	1	1	1	0	ABC	transporter
AAA_5	PF07728.14	gi|284161466|ref|YP_003400089.1|	-	0.03	14.3	0.2	3.6	7.6	0.0	2.4	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MeaB	PF03308.16	gi|284161466|ref|YP_003400089.1|	-	0.047	12.7	0.0	0.068	12.1	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
LpxK	PF02606.14	gi|284161466|ref|YP_003400089.1|	-	0.068	12.3	0.1	0.14	11.3	0.0	1.4	2	0	0	2	2	1	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_19	PF13245.6	gi|284161466|ref|YP_003400089.1|	-	0.077	13.3	0.2	0.24	11.7	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|284161466|ref|YP_003400089.1|	-	0.078	12.9	5.5	0.13	12.1	5.5	1.5	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
UPF0180	PF03698.13	gi|284161466|ref|YP_003400089.1|	-	0.08	13.1	0.2	1.3	9.3	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
SRP54	PF00448.22	gi|284161466|ref|YP_003400089.1|	-	0.089	12.4	0.1	0.22	11.1	0.0	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
APS_kinase	PF01583.20	gi|284161466|ref|YP_003400089.1|	-	0.11	12.3	0.0	0.19	11.6	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
T2SSE	PF00437.20	gi|284161466|ref|YP_003400089.1|	-	0.12	11.5	0.6	0.36	9.9	0.0	2.1	2	1	1	3	3	3	0	Type	II/IV	secretion	system	protein
IlvN	PF07991.12	gi|284161467|ref|YP_003400090.1|	-	4.9e-76	253.9	0.1	6.9e-76	253.4	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IlvC	PF01450.19	gi|284161467|ref|YP_003400090.1|	-	4.3e-65	218.4	2.0	6.2e-65	217.9	2.0	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.17	gi|284161467|ref|YP_003400090.1|	-	9.8e-07	29.3	0.0	2.2e-06	28.1	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|284161467|ref|YP_003400090.1|	-	1.4e-05	24.6	0.0	2.3e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.21	gi|284161467|ref|YP_003400090.1|	-	0.00017	21.7	0.0	0.00037	20.6	0.0	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|284161467|ref|YP_003400090.1|	-	0.00037	20.7	0.1	0.00092	19.4	0.1	1.6	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|284161467|ref|YP_003400090.1|	-	0.11	12.5	0.0	21	5.1	0.0	2.4	1	1	1	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.16	gi|284161467|ref|YP_003400090.1|	-	0.12	12.0	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
HypA	PF01155.19	gi|284161468|ref|YP_003400091.1|	-	0.0022	18.0	2.4	0.0022	18.0	2.4	2.0	2	1	1	3	3	3	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
SapB_2	PF03489.17	gi|284161468|ref|YP_003400091.1|	-	0.0028	17.7	0.1	0.0052	16.9	0.1	1.4	1	0	0	1	1	1	1	Saposin-like	type	B,	region	2
Zn-ribbon_8	PF09723.10	gi|284161468|ref|YP_003400091.1|	-	0.0052	16.9	5.3	0.01	15.9	5.3	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
DZR	PF12773.7	gi|284161468|ref|YP_003400091.1|	-	0.02	14.9	2.3	0.095	12.7	2.5	1.4	1	1	1	2	2	2	0	Double	zinc	ribbon
TFIIS_C	PF01096.18	gi|284161468|ref|YP_003400091.1|	-	0.038	13.8	0.9	3.2	7.7	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
PhnA_Zn_Ribbon	PF08274.12	gi|284161468|ref|YP_003400091.1|	-	0.05	13.6	1.1	1.2	9.1	0.2	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Peptidase_S30	PF01577.16	gi|284161468|ref|YP_003400091.1|	-	0.064	12.9	0.1	0.074	12.6	0.1	1.1	1	0	0	1	1	1	0	Potyvirus	P1	protease
zf-ribbon_3	PF13248.6	gi|284161468|ref|YP_003400091.1|	-	0.17	11.4	4.0	2	8.0	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
NRDD	PF13597.6	gi|284161468|ref|YP_003400091.1|	-	0.17	10.6	1.9	0.2	10.4	1.9	1.3	1	1	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zinc_ribbon_2	PF13240.6	gi|284161468|ref|YP_003400091.1|	-	0.29	10.9	6.9	0.54	10.1	6.9	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|284161468|ref|YP_003400091.1|	-	0.36	10.6	7.1	3.5	7.4	7.1	2.0	1	1	0	1	1	1	0	Rubredoxin	metal	binding	domain
DUF983	PF06170.12	gi|284161468|ref|YP_003400091.1|	-	0.75	10.2	2.1	2.5	8.5	2.0	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF983)
DUF35_N	PF12172.8	gi|284161468|ref|YP_003400091.1|	-	1	9.3	5.3	3.4	7.6	4.7	1.9	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C2H2_3	PF13878.6	gi|284161468|ref|YP_003400091.1|	-	1.8	8.5	5.5	3.8	7.4	0.1	2.4	2	1	1	3	3	3	0	zinc-finger	of	acetyl-transferase	ESCO
PvlArgDC	PF01862.16	gi|284161469|ref|YP_003400092.1|	-	1.3e-59	200.7	0.0	1.4e-59	200.5	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
PGK	PF00162.19	gi|284161470|ref|YP_003400093.1|	-	1.3e-106	356.8	2.4	1.5e-106	356.6	2.4	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
MMR_HSR1_C	PF08438.10	gi|284161471|ref|YP_003400094.1|	-	5.1e-34	117.2	0.0	8.3e-34	116.5	0.0	1.3	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|284161471|ref|YP_003400094.1|	-	7.5e-20	71.1	0.0	2.9e-19	69.2	0.0	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|284161471|ref|YP_003400094.1|	-	6.5e-15	54.9	0.1	1.4e-14	53.8	0.1	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|284161471|ref|YP_003400094.1|	-	8.2e-08	31.9	0.2	3.9e-06	26.5	0.0	2.6	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.13	gi|284161471|ref|YP_003400094.1|	-	0.0087	16.2	0.1	0.072	13.3	0.1	2.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF933)
Mistic	PF11458.8	gi|284161471|ref|YP_003400094.1|	-	0.037	14.0	0.1	0.078	12.9	0.1	1.5	1	0	0	1	1	1	0	Membrane-integrating	protein	Mistic
GTP_EFTU	PF00009.27	gi|284161471|ref|YP_003400094.1|	-	0.046	13.3	0.3	2.8	7.4	0.0	3.0	3	0	0	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
DUF2095	PF09868.9	gi|284161472|ref|YP_003400095.1|	-	2.6e-10	40.4	0.4	5.3e-07	29.7	0.1	2.0	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
Pyr_redox_2	PF07992.14	gi|284161473|ref|YP_003400096.1|	-	3.3e-62	210.4	4.2	3.8e-62	210.2	4.2	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|284161473|ref|YP_003400096.1|	-	7e-31	107.6	3.4	1.4e-25	90.2	0.9	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161473|ref|YP_003400096.1|	-	3.2e-25	88.5	0.8	1.2e-20	73.9	1.3	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|284161473|ref|YP_003400096.1|	-	2.2e-12	47.2	7.1	0.002	17.8	0.0	4.1	3	1	1	4	4	4	4	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|284161473|ref|YP_003400096.1|	-	1.1e-11	44.1	0.1	5.1e-05	22.2	0.0	3.3	3	0	0	3	3	3	3	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|284161473|ref|YP_003400096.1|	-	2.1e-09	37.0	4.0	0.00011	21.5	0.0	4.3	3	1	2	5	5	5	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|284161473|ref|YP_003400096.1|	-	6.1e-09	36.0	0.0	0.00045	20.4	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|284161473|ref|YP_003400096.1|	-	1e-08	34.8	0.1	0.0027	17.0	0.0	2.7	2	1	0	2	2	2	2	FAD	binding	domain
K_oxygenase	PF13434.6	gi|284161473|ref|YP_003400096.1|	-	6.1e-07	28.9	0.1	0.061	12.4	0.1	3.6	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_oxidored	PF12831.7	gi|284161473|ref|YP_003400096.1|	-	6.3e-07	29.1	1.2	0.00063	19.2	0.0	3.1	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|284161473|ref|YP_003400096.1|	-	6.4e-07	28.8	0.2	1.9e-05	24.0	0.0	2.6	2	1	0	2	2	2	1	Thi4	family
GIDA	PF01134.22	gi|284161473|ref|YP_003400096.1|	-	6.8e-07	28.7	0.5	0.0049	16.0	0.0	3.6	4	0	0	4	4	4	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.6	gi|284161473|ref|YP_003400096.1|	-	8.2e-07	29.4	0.6	4.8e-05	23.7	0.4	2.3	2	0	0	2	2	2	1	Putative	NAD(P)-binding
PALP	PF00291.25	gi|284161473|ref|YP_003400096.1|	-	1e-05	25.1	1.8	0.0066	15.9	0.9	2.8	1	1	1	2	2	2	2	Pyridoxal-phosphate	dependent	enzyme
IlvN	PF07991.12	gi|284161473|ref|YP_003400096.1|	-	4.3e-05	23.1	0.0	0.0016	18.1	0.0	2.3	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|284161473|ref|YP_003400096.1|	-	0.00058	19.2	0.2	0.64	9.3	0.1	2.5	2	1	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|284161473|ref|YP_003400096.1|	-	0.0011	18.1	1.8	0.0065	15.6	0.0	2.7	3	1	1	4	4	4	1	Lycopene	cyclase	protein
XdhC_C	PF13478.6	gi|284161473|ref|YP_003400096.1|	-	0.0025	18.3	0.0	0.31	11.5	0.0	2.3	2	0	0	2	2	2	1	XdhC	Rossmann	domain
Shikimate_DH	PF01488.20	gi|284161473|ref|YP_003400096.1|	-	0.0076	16.3	0.0	0.044	13.8	0.0	2.2	2	1	1	3	3	2	1	Shikimate	/	quinate	5-dehydrogenase
Oxidored_nitro	PF00148.19	gi|284161473|ref|YP_003400096.1|	-	0.008	15.0	0.1	0.012	14.4	0.1	1.3	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
NAD_binding_9	PF13454.6	gi|284161473|ref|YP_003400096.1|	-	0.012	15.6	1.7	6.1	6.8	0.0	3.3	3	1	1	4	4	4	0	FAD-NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|284161473|ref|YP_003400096.1|	-	0.036	13.4	0.0	8	5.8	0.0	2.3	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Tho1_MOS11_C	PF18592.1	gi|284161473|ref|YP_003400096.1|	-	0.063	13.1	1.2	2.9	7.8	0.2	2.7	3	0	0	3	3	3	0	Tho1/MOS11	C-terminal	domain
Trp_halogenase	PF04820.14	gi|284161473|ref|YP_003400096.1|	-	0.11	11.4	1.0	8.4	5.1	0.1	2.8	2	1	1	3	3	3	0	Tryptophan	halogenase
ApbA	PF02558.16	gi|284161473|ref|YP_003400096.1|	-	0.11	12.1	0.2	0.37	10.4	0.0	1.9	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
TrkH	PF02386.16	gi|284161474|ref|YP_003400097.1|	-	2.7e-62	210.8	22.7	1.3e-60	205.3	22.7	2.1	1	1	0	1	1	1	1	Cation	transport	protein
RHH_1	PF01402.21	gi|284161475|ref|YP_003400098.1|	-	7.1e-06	25.8	1.7	9.9e-06	25.3	0.4	1.7	1	1	1	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
ParD_antitoxin	PF03693.14	gi|284161475|ref|YP_003400098.1|	-	0.00044	20.6	0.0	0.00046	20.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	antitoxin	of	ParD	toxin-antitoxin	type	II	system	and	RHH
RHH_8	PF17723.1	gi|284161475|ref|YP_003400098.1|	-	0.0016	18.7	0.0	0.0016	18.7	0.0	1.0	1	0	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
RuvA_C	PF07499.13	gi|284161475|ref|YP_003400098.1|	-	0.037	14.5	0.0	0.057	13.9	0.0	1.4	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
TerB_N	PF13208.6	gi|284161475|ref|YP_003400098.1|	-	0.087	12.5	0.1	0.087	12.5	0.1	1.0	1	0	0	1	1	1	0	TerB	N-terminal	domain
DUF469	PF04320.14	gi|284161475|ref|YP_003400098.1|	-	0.1	13.5	0.0	0.1	13.5	0.0	1.1	1	0	0	1	1	1	0	Protein	with	unknown	function	(DUF469)
DUF3983	PF13137.6	gi|284161475|ref|YP_003400098.1|	-	0.1	12.4	0.8	0.16	11.8	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3983)
Tubulin	PF00091.25	gi|284161476|ref|YP_003400099.1|	-	4.6e-40	137.9	0.2	8.3e-40	137.1	0.2	1.5	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|284161476|ref|YP_003400099.1|	-	7.2e-32	109.6	0.1	7.2e-32	109.6	0.1	2.0	2	1	0	2	2	2	1	FtsZ	family,	C-terminal	domain
Tubulin_2	PF13809.6	gi|284161476|ref|YP_003400099.1|	-	0.0033	16.7	6.3	0.077	12.2	1.0	2.5	1	1	0	2	2	2	2	Tubulin	like
ThiF	PF00899.21	gi|284161476|ref|YP_003400099.1|	-	0.048	13.0	0.0	0.19	11.1	0.0	1.9	2	0	0	2	2	2	0	ThiF	family
CoA_binding	PF02629.19	gi|284161476|ref|YP_003400099.1|	-	0.15	12.8	4.3	2.2	9.0	0.1	3.5	4	0	0	4	4	4	0	CoA	binding	domain
DS	PF01916.17	gi|284161477|ref|YP_003400100.1|	-	4.6e-110	367.4	0.0	5.2e-110	367.2	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Bac_DNA_binding	PF00216.21	gi|284161477|ref|YP_003400100.1|	-	0.074	13.3	0.1	0.14	12.4	0.1	1.4	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
SLBB	PF10531.9	gi|284161477|ref|YP_003400100.1|	-	0.14	12.0	0.0	3.9	7.4	0.0	2.5	2	0	0	2	2	2	0	SLBB	domain
PTS_2-RNA	PF01885.16	gi|284161478|ref|YP_003400101.1|	-	1.9e-30	106.3	0.0	2.3e-30	106.0	0.0	1.1	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
PARP	PF00644.20	gi|284161478|ref|YP_003400101.1|	-	0.0022	17.6	0.0	0.003	17.2	0.0	1.2	1	0	0	1	1	1	1	Poly(ADP-ribose)	polymerase	catalytic	domain
SUI1	PF01253.22	gi|284161478|ref|YP_003400101.1|	-	0.11	13.1	0.0	16	6.1	0.0	2.4	2	0	0	2	2	2	0	Translation	initiation	factor	SUI1
Pyr_redox_2	PF07992.14	gi|284161479|ref|YP_003400102.1|	-	1.8e-17	63.5	0.5	2.4e-07	30.3	0.0	3.3	3	1	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|284161479|ref|YP_003400102.1|	-	5.3e-07	28.7	0.3	0.019	13.7	0.1	2.4	2	0	0	2	2	2	2	HI0933-like	protein
DAO	PF01266.24	gi|284161479|ref|YP_003400102.1|	-	7e-06	25.9	0.1	0.076	12.6	0.1	2.5	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|284161479|ref|YP_003400102.1|	-	1.4e-05	24.4	0.1	0.0081	15.3	0.0	3.0	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|284161479|ref|YP_003400102.1|	-	0.00033	20.8	2.4	0.01	16.1	0.3	3.0	3	0	0	3	3	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|284161479|ref|YP_003400102.1|	-	0.00065	19.0	1.4	0.001	18.4	0.1	2.0	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.27	gi|284161479|ref|YP_003400102.1|	-	0.0017	18.9	2.8	0.043	14.4	0.1	3.7	4	0	0	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|284161479|ref|YP_003400102.1|	-	0.0043	16.2	1.6	0.066	12.3	0.6	2.5	3	0	0	3	3	3	1	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|284161479|ref|YP_003400102.1|	-	0.022	14.0	0.2	0.093	12.0	0.0	2.0	2	0	0	2	2	2	0	FAD	binding	domain
NAD_binding_9	PF13454.6	gi|284161479|ref|YP_003400102.1|	-	0.025	14.6	0.5	22	5.0	0.0	3.2	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Amino_oxidase	PF01593.24	gi|284161479|ref|YP_003400102.1|	-	0.097	11.9	0.0	0.31	10.3	0.0	1.7	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
Aldose_epim	PF01263.20	gi|284161479|ref|YP_003400102.1|	-	0.11	11.8	0.0	0.15	11.3	0.0	1.2	1	0	0	1	1	1	0	Aldose	1-epimerase
Pyr_redox_3	PF13738.6	gi|284161479|ref|YP_003400102.1|	-	0.12	11.6	3.8	2.8	7.1	0.8	2.8	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4346	PF14251.6	gi|284161480|ref|YP_003400103.1|	-	6.9e-10	39.0	0.0	1.8e-09	37.6	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
Pterin_bind	PF00809.22	gi|284161480|ref|YP_003400103.1|	-	1.3e-07	31.5	0.7	1.1e-06	28.5	0.6	2.4	1	1	1	2	2	2	1	Pterin	binding	enzyme
GcpE	PF04551.14	gi|284161480|ref|YP_003400103.1|	-	0.12	11.5	0.1	0.56	9.2	0.0	1.9	1	1	1	2	2	2	0	GcpE	protein
tRNA-synt_1	PF00133.22	gi|284161481|ref|YP_003400104.1|	-	3.2e-205	682.9	8.9	3.2e-205	682.9	8.9	1.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|284161481|ref|YP_003400104.1|	-	1.5e-31	109.4	1.9	1.5e-31	109.4	1.9	2.1	3	0	0	3	3	3	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|284161481|ref|YP_003400104.1|	-	4.4e-25	88.3	6.8	5.6e-09	35.2	0.0	4.1	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|284161481|ref|YP_003400104.1|	-	1.9e-07	30.7	1.2	7.8e-05	22.2	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|284161481|ref|YP_003400104.1|	-	0.0029	16.6	0.0	0.012	14.5	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
DALR_1	PF05746.15	gi|284161481|ref|YP_003400104.1|	-	0.0095	16.1	0.0	0.1	12.8	0.0	2.4	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
HXXSHH	PF07586.11	gi|284161481|ref|YP_003400104.1|	-	0.15	11.6	0.0	0.25	10.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1552)
DUF1877	PF08974.10	gi|284161481|ref|YP_003400104.1|	-	2.5	8.2	5.5	2.8	8.0	0.1	3.2	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF1877)
PAC2	PF09754.9	gi|284161482|ref|YP_003400105.1|	-	3.9e-53	180.6	0.0	4.6e-53	180.4	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Lge1	PF11488.8	gi|284161482|ref|YP_003400105.1|	-	0.066	13.4	0.8	0.11	12.7	0.8	1.3	1	0	0	1	1	1	0	Transcriptional	regulatory	protein	LGE1
RPW8	PF05659.11	gi|284161482|ref|YP_003400105.1|	-	0.07	12.8	0.4	0.13	12.0	0.4	1.4	1	0	0	1	1	1	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Prefoldin	PF02996.17	gi|284161482|ref|YP_003400105.1|	-	0.074	13.0	1.2	0.13	12.1	1.2	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
BLOC1_2	PF10046.9	gi|284161482|ref|YP_003400105.1|	-	0.097	13.0	1.3	0.19	12.0	1.3	1.4	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Big_11	PF18200.1	gi|284161482|ref|YP_003400105.1|	-	0.11	12.4	0.0	0.24	11.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	Ig-like	domain
DNA_pol3_a_NII	PF11490.8	gi|284161482|ref|YP_003400105.1|	-	0.19	11.6	2.6	0.32	10.9	2.6	1.3	1	0	0	1	1	1	0	DNA	polymerase	III	polC-type	N-terminus	II
UPF0149	PF03695.13	gi|284161482|ref|YP_003400105.1|	-	0.19	12.0	0.1	0.25	11.6	0.1	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0149)
bZIP_2	PF07716.15	gi|284161482|ref|YP_003400105.1|	-	0.87	9.7	3.7	1.5	9.0	3.7	1.3	1	0	0	1	1	1	0	Basic	region	leucine	zipper
Nop10p	PF04135.12	gi|284161483|ref|YP_003400106.1|	-	4.9e-26	90.5	4.6	5.6e-26	90.3	4.6	1.1	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
PolC_DP2	PF03833.13	gi|284161483|ref|YP_003400106.1|	-	0.00023	19.2	0.2	0.00023	19.2	0.2	1.1	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DUF35_N	PF12172.8	gi|284161483|ref|YP_003400106.1|	-	0.00068	19.5	2.1	0.0016	18.3	2.1	1.7	1	1	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RecR	PF02132.15	gi|284161483|ref|YP_003400106.1|	-	0.00088	18.8	0.7	0.0011	18.5	0.7	1.2	1	0	0	1	1	1	1	RecR	protein
zf-ribbon_3	PF13248.6	gi|284161483|ref|YP_003400106.1|	-	0.0026	17.1	7.6	0.03	13.7	7.6	2.1	1	1	0	1	1	1	1	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|284161483|ref|YP_003400106.1|	-	0.003	17.7	1.1	0.71	10.1	0.0	2.1	1	1	1	2	2	2	2	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF1272	PF06906.11	gi|284161483|ref|YP_003400106.1|	-	0.0032	17.5	1.8	0.0042	17.1	1.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
DZR	PF12773.7	gi|284161483|ref|YP_003400106.1|	-	0.0036	17.3	0.8	0.005	16.8	0.8	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
NRDD	PF13597.6	gi|284161483|ref|YP_003400106.1|	-	0.013	14.3	1.1	0.014	14.2	1.1	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-C4_Topoisom	PF01396.19	gi|284161483|ref|YP_003400106.1|	-	0.023	14.5	3.3	1.5	8.6	0.1	2.4	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
TackOD1	PF18551.1	gi|284161483|ref|YP_003400106.1|	-	0.031	13.9	0.9	0.037	13.7	0.9	1.1	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
zinc_ribbon_2	PF13240.6	gi|284161483|ref|YP_003400106.1|	-	0.044	13.5	9.2	0.55	10.0	0.9	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|284161483|ref|YP_003400106.1|	-	0.053	13.1	7.3	0.63	9.6	0.8	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-C2HC_2	PF13913.6	gi|284161483|ref|YP_003400106.1|	-	0.058	13.3	8.0	0.45	10.5	2.1	2.5	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-NADH-PPase	PF09297.11	gi|284161483|ref|YP_003400106.1|	-	0.062	13.0	5.0	1.2	8.9	0.2	2.2	1	1	1	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2072	PF09845.9	gi|284161483|ref|YP_003400106.1|	-	0.089	13.0	1.8	0.19	12.0	1.8	1.6	1	1	0	1	1	1	0	Zn-ribbon	containing	protein
zf-IS66	PF13005.7	gi|284161483|ref|YP_003400106.1|	-	0.095	13.1	4.1	22	5.5	4.1	2.3	1	1	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
zf-ISL3	PF14690.6	gi|284161483|ref|YP_003400106.1|	-	0.11	13.2	7.0	0.93	10.2	0.5	2.7	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF4295	PF14128.6	gi|284161483|ref|YP_003400106.1|	-	0.11	12.3	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4295)
Zn-ribbon_8	PF09723.10	gi|284161483|ref|YP_003400106.1|	-	0.12	12.5	5.7	1.3	9.2	0.3	2.3	1	1	1	2	2	2	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161483|ref|YP_003400106.1|	-	0.15	12.0	6.3	0.78	9.8	0.3	2.4	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
UPF0547	PF10571.9	gi|284161483|ref|YP_003400106.1|	-	0.16	12.1	4.8	1.8	8.7	0.2	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HypA	PF01155.19	gi|284161483|ref|YP_003400106.1|	-	0.16	12.0	1.0	0.21	11.6	1.0	1.2	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Ribosomal_L32p	PF01783.23	gi|284161483|ref|YP_003400106.1|	-	0.17	12.1	4.3	17	5.8	0.3	2.0	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
DUF1610	PF07754.11	gi|284161483|ref|YP_003400106.1|	-	0.19	11.7	10.9	0.51	10.3	2.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-RRN7	PF11781.8	gi|284161483|ref|YP_003400106.1|	-	0.23	11.2	5.3	0.46	10.2	0.4	2.3	1	1	1	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-FPG_IleRS	PF06827.14	gi|284161483|ref|YP_003400106.1|	-	0.28	11.1	7.8	11	6.0	0.8	2.5	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Cys_rich_CPXG	PF14255.6	gi|284161483|ref|YP_003400106.1|	-	0.31	11.0	2.0	1.4	8.9	0.1	2.1	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
CpXC	PF14353.6	gi|284161483|ref|YP_003400106.1|	-	0.33	11.0	2.9	4.5	7.4	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
zf-TFIIB	PF13453.6	gi|284161483|ref|YP_003400106.1|	-	0.35	10.2	4.1	1.4	8.3	0.2	2.2	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
zf-tcix	PF14952.6	gi|284161483|ref|YP_003400106.1|	-	0.64	9.7	10.4	0.26	10.9	2.6	2.2	1	1	1	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf_C2H2_10	PF18414.1	gi|284161483|ref|YP_003400106.1|	-	1.4	8.5	5.8	8.3	6.1	0.7	2.4	2	0	0	2	2	2	0	C2H2	type	zinc-finger
zf-RING_7	PF02591.15	gi|284161483|ref|YP_003400106.1|	-	1.6	9.0	5.3	8.5	6.7	0.2	2.4	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
TFIIS_C	PF01096.18	gi|284161483|ref|YP_003400106.1|	-	1.8	8.5	5.8	11	5.9	0.1	2.4	3	0	0	3	3	2	0	Transcription	factor	S-II	(TFIIS)
ADK_lid	PF05191.14	gi|284161483|ref|YP_003400106.1|	-	3.3	7.8	8.9	9.9	6.2	0.6	2.5	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Sgf11	PF08209.11	gi|284161483|ref|YP_003400106.1|	-	5.5	6.6	7.8	5.9	6.5	0.7	2.2	1	1	1	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-ACC	PF17848.1	gi|284161483|ref|YP_003400106.1|	-	5.7	7.1	11.7	4.8	7.4	1.7	2.4	1	1	1	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf_UBZ	PF18439.1	gi|284161483|ref|YP_003400106.1|	-	5.8	6.6	5.3	15	5.3	0.4	2.2	1	1	1	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
UPF0051	PF01458.17	gi|284161484|ref|YP_003400107.1|	-	1.2e-55	188.5	0.0	1.5e-55	188.3	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.27	gi|284161485|ref|YP_003400108.1|	-	1.3e-23	84.0	0.0	1.9e-23	83.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161485|ref|YP_003400108.1|	-	7.6e-08	32.5	0.1	0.00035	20.5	0.0	2.1	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161485|ref|YP_003400108.1|	-	3.6e-06	26.6	0.1	0.01	15.3	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|284161485|ref|YP_003400108.1|	-	7.5e-05	23.3	0.1	0.0002	21.9	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|284161485|ref|YP_003400108.1|	-	0.00015	21.4	0.0	0.00027	20.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|284161485|ref|YP_003400108.1|	-	0.0047	16.9	0.0	0.0074	16.2	0.0	1.3	1	0	0	1	1	1	1	RsgA	GTPase
AAA_15	PF13175.6	gi|284161485|ref|YP_003400108.1|	-	0.0085	15.8	0.0	0.013	15.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|284161485|ref|YP_003400108.1|	-	0.015	15.2	0.0	0.024	14.6	0.0	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_25	PF13481.6	gi|284161485|ref|YP_003400108.1|	-	0.025	14.2	0.0	0.039	13.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
CdhC	PF03598.15	gi|284161485|ref|YP_003400108.1|	-	0.028	14.3	0.5	3.8	7.3	0.0	3.0	1	1	1	3	3	3	0	CO	dehydrogenase/acetyl-CoA	synthase	complex	beta	subunit
IstB_IS21	PF01695.17	gi|284161485|ref|YP_003400108.1|	-	0.035	13.8	0.0	0.063	13.0	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|284161485|ref|YP_003400108.1|	-	0.047	14.1	0.0	0.087	13.3	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP-synt_ab	PF00006.25	gi|284161485|ref|YP_003400108.1|	-	0.14	11.8	0.0	0.2	11.3	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Cytidylate_kin	PF02224.18	gi|284161485|ref|YP_003400108.1|	-	0.15	11.8	0.1	1.3	8.8	0.1	2.4	2	1	1	3	3	3	0	Cytidylate	kinase
NACHT	PF05729.12	gi|284161485|ref|YP_003400108.1|	-	0.2	11.5	0.0	0.33	10.9	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_13	PF13166.6	gi|284161485|ref|YP_003400108.1|	-	0.29	9.8	0.0	0.72	8.4	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
Metallophos_2	PF12850.7	gi|284161486|ref|YP_003400109.1|	-	3.8e-27	95.5	0.1	4.9e-27	95.1	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|284161486|ref|YP_003400109.1|	-	1.4e-12	48.5	2.8	3.3e-10	40.8	0.1	2.1	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|284161486|ref|YP_003400109.1|	-	6.5e-08	32.2	0.7	0.00056	19.3	0.1	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
CSD2	PF17876.1	gi|284161486|ref|YP_003400109.1|	-	0.083	13.1	0.3	0.28	11.4	0.1	2.0	1	1	0	2	2	2	0	Cold	shock	domain
RsgI_N	PF12791.7	gi|284161486|ref|YP_003400109.1|	-	0.096	12.6	0.2	0.53	10.3	0.1	2.2	3	0	0	3	3	3	0	Anti-sigma	factor	N-terminus
LON_substr_bdg	PF02190.16	gi|284161486|ref|YP_003400109.1|	-	0.11	12.3	0.0	0.14	12.1	0.0	1.1	1	0	0	1	1	1	0	ATP-dependent	protease	La	(LON)	substrate-binding	domain
DUF447	PF04289.12	gi|284161487|ref|YP_003400110.1|	-	3.8e-38	131.0	0.0	4.4e-38	130.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
CitG	PF01874.16	gi|284161488|ref|YP_003400111.1|	-	5.1e-62	210.1	0.0	5.8e-62	209.9	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
RecX	PF02631.16	gi|284161488|ref|YP_003400111.1|	-	0.16	12.4	0.1	13	6.3	0.1	2.2	2	0	0	2	2	2	0	RecX	family
DUF43	PF01861.16	gi|284161489|ref|YP_003400112.1|	-	2.5e-105	351.1	0.3	3.7e-105	350.5	0.3	1.2	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
Methyltransf_25	PF13649.6	gi|284161489|ref|YP_003400112.1|	-	0.00024	21.8	0.0	0.0005	20.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
HTH_45	PF14947.6	gi|284161489|ref|YP_003400112.1|	-	0.0034	17.3	0.1	0.007	16.3	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
N6-adenineMlase	PF10237.9	gi|284161489|ref|YP_003400112.1|	-	0.0036	17.1	1.5	0.021	14.6	0.1	2.1	2	0	0	2	2	2	1	Probable	N6-adenine	methyltransferase
AAA_assoc_C	PF09821.9	gi|284161489|ref|YP_003400112.1|	-	0.019	15.5	0.0	0.045	14.3	0.0	1.6	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
NHase_alpha	PF02979.16	gi|284161489|ref|YP_003400112.1|	-	0.056	12.7	0.1	0.099	11.9	0.1	1.3	1	0	0	1	1	1	0	Nitrile	hydratase,	alpha	chain
HemN_C	PF06969.16	gi|284161489|ref|YP_003400112.1|	-	0.096	12.8	0.0	0.34	11.0	0.0	1.9	2	0	0	2	2	2	0	HemN	C-terminal	domain
CotJB	PF12652.7	gi|284161489|ref|YP_003400112.1|	-	0.11	12.8	0.0	2.9	8.2	0.0	2.3	2	0	0	2	2	2	0	CotJB	protein
UPF0020	PF01170.18	gi|284161489|ref|YP_003400112.1|	-	0.14	11.9	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
PUA	PF01472.20	gi|284161490|ref|YP_003400113.1|	-	6.6e-18	64.4	3.4	1e-17	63.8	3.4	1.2	1	0	0	1	1	1	1	PUA	domain
DUF1947	PF09183.10	gi|284161490|ref|YP_003400113.1|	-	2.4e-06	27.7	3.5	4e-06	27.0	2.6	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1947)
UPF0113	PF03657.13	gi|284161490|ref|YP_003400113.1|	-	4.3e-05	23.7	0.1	7e-05	23.0	0.1	1.3	1	0	0	1	1	1	1	UPF0113	PUA	domain
ACT	PF01842.25	gi|284161491|ref|YP_003400114.1|	-	4.8e-06	26.2	1.1	1.9e-05	24.3	0.1	2.2	2	1	0	2	2	2	1	ACT	domain
ACT_7	PF13840.6	gi|284161491|ref|YP_003400114.1|	-	0.00058	19.6	0.0	0.0014	18.4	0.0	1.7	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.6	gi|284161491|ref|YP_003400114.1|	-	0.0071	16.9	0.6	4.6	7.9	0.0	2.4	2	0	0	2	2	2	2	ACT	domain
TraB	PF01963.17	gi|284161492|ref|YP_003400115.1|	-	5.9e-34	118.2	0.0	1.4e-33	116.9	0.0	1.5	1	1	0	1	1	1	1	TraB	family
Cofac_haem_bdg	PF04187.13	gi|284161492|ref|YP_003400115.1|	-	0.079	12.9	0.0	0.3	11.0	0.0	1.8	2	0	0	2	2	2	0	Haem-binding	uptake,	Tiki	superfamily,	ChaN
AMP-binding	PF00501.28	gi|284161493|ref|YP_003400116.1|	-	4.6e-10	38.7	0.2	8.5e-10	37.8	0.0	1.5	2	0	0	2	2	2	1	AMP-binding	enzyme
AMP-binding_C_2	PF14535.6	gi|284161493|ref|YP_003400116.1|	-	3.4e-06	27.3	0.0	3.2e-05	24.1	0.0	2.4	1	1	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
GH3	PF03321.13	gi|284161493|ref|YP_003400116.1|	-	0.0038	16.2	0.0	0.0064	15.4	0.0	1.3	1	0	0	1	1	1	1	GH3	auxin-responsive	promoter
PRC	PF05239.16	gi|284161493|ref|YP_003400116.1|	-	0.015	15.4	0.1	2.8	8.1	0.0	2.9	2	0	0	2	2	2	0	PRC-barrel	domain
PetM	PF08041.11	gi|284161494|ref|YP_003400117.1|	-	0.0032	17.0	0.3	0.009	15.6	0.3	1.9	1	0	0	1	1	1	1	PetM	family	of	cytochrome	b6f	complex	subunit	7
Myc_target_1	PF15179.6	gi|284161494|ref|YP_003400117.1|	-	2.6	7.9	3.7	1.7	8.5	0.4	1.9	2	0	0	2	2	2	0	Myc	target	protein	1
Lactamase_B_3	PF13483.6	gi|284161495|ref|YP_003400118.1|	-	3.7e-12	46.4	0.1	5.8e-12	45.8	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|284161495|ref|YP_003400118.1|	-	1.4e-06	28.0	0.3	1.7e-05	24.5	0.1	2.3	1	1	1	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284161495|ref|YP_003400118.1|	-	0.00081	19.5	3.0	0.012	15.6	1.7	2.2	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Fe-ADH	PF00465.19	gi|284161496|ref|YP_003400119.1|	-	3.1e-76	256.6	0.0	3.8e-76	256.3	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.6	gi|284161496|ref|YP_003400119.1|	-	6.9e-12	45.6	0.7	3.4e-10	40.1	0.1	2.2	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
EutA	PF06277.11	gi|284161496|ref|YP_003400119.1|	-	0.04	12.8	0.0	0.072	11.9	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutA
DNA_methylase	PF00145.17	gi|284161497|ref|YP_003400120.1|	-	1.2e-57	195.7	0.0	3.6e-41	141.6	0.1	2.1	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.10	gi|284161497|ref|YP_003400120.1|	-	0.011	15.3	0.0	0.026	14.1	0.0	1.6	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Ring_hydroxyl_B	PF00866.18	gi|284161497|ref|YP_003400120.1|	-	0.18	11.9	0.0	0.34	11.0	0.0	1.4	1	0	0	1	1	1	0	Ring	hydroxylating	beta	subunit
Iso_dh	PF00180.20	gi|284161498|ref|YP_003400121.1|	-	6.7e-105	351.1	0.0	8.1e-105	350.8	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
F420_oxidored	PF03807.17	gi|284161499|ref|YP_003400122.1|	-	4.5e-18	65.6	0.4	3.5e-17	62.8	0.1	2.2	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
adh_short	PF00106.25	gi|284161499|ref|YP_003400122.1|	-	0.00015	21.3	0.5	0.00044	19.8	0.2	1.8	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_2	PF03446.15	gi|284161499|ref|YP_003400122.1|	-	0.00066	19.9	0.1	0.0014	18.9	0.0	1.6	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|284161499|ref|YP_003400122.1|	-	0.0024	17.8	0.0	0.0035	17.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.24	gi|284161499|ref|YP_003400122.1|	-	0.0098	16.3	0.1	0.022	15.2	0.1	1.7	1	1	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|284161499|ref|YP_003400122.1|	-	0.014	15.5	0.2	0.13	12.3	0.0	2.3	2	1	1	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
Epimerase	PF01370.21	gi|284161499|ref|YP_003400122.1|	-	0.035	13.6	0.1	0.068	12.6	0.0	1.5	2	0	0	2	2	2	0	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.10	gi|284161499|ref|YP_003400122.1|	-	0.041	13.8	0.1	0.075	12.9	0.1	1.4	1	0	0	1	1	1	0	KR	domain
IlvN	PF07991.12	gi|284161499|ref|YP_003400122.1|	-	0.054	13.1	0.0	0.099	12.2	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
ApbA	PF02558.16	gi|284161499|ref|YP_003400122.1|	-	0.07	12.8	0.6	0.17	11.5	0.5	1.8	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
2-Hacid_dh_C	PF02826.19	gi|284161499|ref|YP_003400122.1|	-	0.076	12.4	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CoA_binding	PF02629.19	gi|284161499|ref|YP_003400122.1|	-	0.087	13.5	0.7	5.3	7.8	0.1	2.4	2	1	0	2	2	2	0	CoA	binding	domain
PALP	PF00291.25	gi|284161499|ref|YP_003400122.1|	-	0.14	11.5	0.0	0.21	11.0	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
Glu_synthase	PF01645.17	gi|284161500|ref|YP_003400123.1|	-	2.9e-11	43.1	0.1	3.2e-08	33.1	0.0	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Gln-synt_C	PF00120.24	gi|284161501|ref|YP_003400124.1|	-	1.3e-124	415.7	0.0	1.6e-124	415.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|284161501|ref|YP_003400124.1|	-	7.7e-23	80.0	0.0	2.5e-22	78.4	0.0	1.9	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
TFIIA_gamma_N	PF02268.16	gi|284161501|ref|YP_003400124.1|	-	0.058	13.4	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
UPF0047	PF01894.17	gi|284161503|ref|YP_003400126.1|	-	2e-41	140.7	0.3	2.3e-41	140.5	0.3	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
EMG1	PF03587.14	gi|284161504|ref|YP_003400127.1|	-	1e-46	159.1	0.1	1.2e-46	158.8	0.1	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
AIRS_C	PF02769.22	gi|284161505|ref|YP_003400128.1|	-	2.4e-21	76.5	0.1	7.6e-21	74.9	0.0	1.8	2	1	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|284161505|ref|YP_003400128.1|	-	3.1e-16	59.8	1.4	7.3e-16	58.6	1.3	1.6	1	1	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
CBS	PF00571.28	gi|284161506|ref|YP_003400129.1|	-	6.3e-23	81.0	7.0	1.2e-11	44.9	0.8	2.0	2	0	0	2	2	2	2	CBS	domain
RibD_C	PF01872.17	gi|284161506|ref|YP_003400129.1|	-	0.076	12.8	0.1	0.54	10.1	0.0	1.9	2	0	0	2	2	2	0	RibD	C-terminal	domain
zf-UDP	PF14569.6	gi|284161507|ref|YP_003400130.1|	-	0.00085	19.4	3.7	0.001	19.1	3.7	1.1	1	0	0	1	1	1	1	Zinc-binding	RING-finger
DUF1610	PF07754.11	gi|284161507|ref|YP_003400130.1|	-	0.2	11.7	0.2	0.2	11.7	0.2	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_2	PF13240.6	gi|284161507|ref|YP_003400130.1|	-	0.36	10.6	0.1	0.36	10.6	0.1	3.1	3	1	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.7	gi|284161507|ref|YP_003400130.1|	-	0.58	10.2	6.8	11	6.2	6.8	2.4	1	1	0	1	1	1	0	Double	zinc	ribbon
HNH	PF01844.23	gi|284161507|ref|YP_003400130.1|	-	0.75	10.0	4.2	0.95	9.7	0.5	2.4	2	1	0	2	2	2	0	HNH	endonuclease
C1_1	PF00130.22	gi|284161507|ref|YP_003400130.1|	-	0.84	9.6	6.7	0.097	12.6	2.9	1.5	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-CRD	PF17979.1	gi|284161507|ref|YP_003400130.1|	-	1	9.5	6.0	1.6	8.8	6.0	1.5	1	1	0	1	1	1	0	Cysteine	rich	domain	with	multizinc	binding	regions
zf-B_box	PF00643.24	gi|284161507|ref|YP_003400130.1|	-	2.1	8.5	8.3	1.7	8.9	1.1	2.7	3	0	0	3	3	3	0	B-box	zinc	finger
NAD_binding_8	PF13450.6	gi|284161508|ref|YP_003400131.1|	-	5.9e-05	23.2	0.0	0.00021	21.5	0.0	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
OTCace	PF00185.24	gi|284161509|ref|YP_003400132.1|	-	5.6e-59	198.7	0.1	9.6e-59	198.0	0.1	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|284161509|ref|YP_003400132.1|	-	6.8e-55	185.2	0.0	1.1e-54	184.5	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
Put_Phosphatase	PF06888.12	gi|284161509|ref|YP_003400132.1|	-	0.049	13.0	0.0	0.22	10.9	0.0	1.9	2	0	0	2	2	2	0	Putative	Phosphatase
DUF2121	PF09894.9	gi|284161509|ref|YP_003400132.1|	-	0.086	12.4	0.2	0.17	11.4	0.2	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2121)
Alba	PF01918.21	gi|284161510|ref|YP_003400133.1|	-	1.5e-21	76.0	0.2	2.2e-21	75.4	0.2	1.3	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.8	gi|284161510|ref|YP_003400133.1|	-	0.001	19.0	0.7	0.0021	18.0	0.3	1.6	1	1	1	2	2	2	1	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
EF-hand_6	PF13405.6	gi|284161511|ref|YP_003400134.1|	-	0.032	14.2	0.0	0.05	13.5	0.0	1.3	1	0	0	1	1	1	0	EF-hand	domain
EF-hand_1	PF00036.32	gi|284161511|ref|YP_003400134.1|	-	0.039	13.5	0.0	0.058	13.0	0.0	1.3	1	0	0	1	1	1	0	EF	hand
VAPB_antitox	PF02697.14	gi|284161512|ref|YP_003400135.1|	-	2.8e-06	28.0	3.8	3.2e-06	27.8	3.8	1.1	1	0	0	1	1	1	1	Putative	antitoxin
RHH_1	PF01402.21	gi|284161512|ref|YP_003400135.1|	-	7.9e-05	22.5	0.6	0.00019	21.2	0.3	1.8	1	1	1	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
KELK	PF15796.5	gi|284161512|ref|YP_003400135.1|	-	0.00074	19.9	1.3	0.00097	19.5	1.3	1.1	1	0	0	1	1	1	1	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
BLOC1_2	PF10046.9	gi|284161512|ref|YP_003400135.1|	-	0.0064	16.8	0.2	0.0086	16.3	0.2	1.4	1	1	0	1	1	1	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
MatP_C	PF17414.2	gi|284161512|ref|YP_003400135.1|	-	0.032	14.4	1.4	0.051	13.8	0.6	1.8	1	1	1	2	2	2	0	MatP	C-terminal	ribbon-helix-helix	domain
G-gamma	PF00631.22	gi|284161512|ref|YP_003400135.1|	-	0.038	14.0	0.1	0.046	13.7	0.1	1.1	1	0	0	1	1	1	0	GGL	domain
RHH_5	PF07878.11	gi|284161512|ref|YP_003400135.1|	-	0.042	13.7	0.1	0.18	11.7	0.1	2.0	2	1	0	2	2	2	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
FliT	PF05400.13	gi|284161512|ref|YP_003400135.1|	-	0.042	14.7	0.2	0.056	14.3	0.2	1.1	1	0	0	1	1	1	0	Flagellar	protein	FliT
hnRNP_Q_AcD	PF18360.1	gi|284161512|ref|YP_003400135.1|	-	0.05	13.6	0.1	0.067	13.2	0.1	1.2	1	0	0	1	1	1	0	Heterogeneous	nuclear	ribonucleoprotein	Q	acidic	domain
RBD-FIP	PF09457.10	gi|284161512|ref|YP_003400135.1|	-	7.1	6.6	7.3	17	5.4	3.5	2.3	2	1	0	2	2	2	0	FIP	domain
DUF2400	PF09674.10	gi|284161513|ref|YP_003400136.1|	-	3.6e-29	102.4	0.1	6.3e-29	101.6	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2400)
dCMP_cyt_deam_1	PF00383.23	gi|284161514|ref|YP_003400137.1|	-	7.2e-27	93.2	0.7	1.2e-16	60.4	0.3	2.6	2	0	0	2	2	2	2	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|284161514|ref|YP_003400137.1|	-	1.3e-19	70.3	0.2	1.4e-14	54.0	0.5	2.4	2	0	0	2	2	2	2	MafB19-like	deaminase
Intein_splicing	PF14890.6	gi|284161514|ref|YP_003400137.1|	-	4.2e-10	39.7	0.0	1.1e-08	35.1	0.0	2.7	1	1	1	2	2	2	2	Intein	splicing	domain
Hint_2	PF13403.6	gi|284161514|ref|YP_003400137.1|	-	1.9e-08	34.7	0.0	3.7e-08	33.8	0.0	1.5	1	0	0	1	1	1	1	Hint	domain
LAGLIDADG_3	PF14528.6	gi|284161514|ref|YP_003400137.1|	-	7.3e-07	29.4	0.0	0.014	15.7	0.0	2.6	2	0	0	2	2	2	2	LAGLIDADG-like	domain
APOBEC3	PF18771.1	gi|284161514|ref|YP_003400137.1|	-	0.0017	18.5	0.7	0.0087	16.2	0.7	2.1	1	1	0	1	1	1	1	APOBEC3
SNAD4	PF18750.1	gi|284161514|ref|YP_003400137.1|	-	0.044	13.9	0.9	0.18	11.9	0.9	2.0	1	1	0	1	1	1	0	Secreted	Novel	AID/APOBEC-like	Deaminase	4
NAD1	PF18778.1	gi|284161514|ref|YP_003400137.1|	-	0.074	13.1	0.2	0.18	11.9	0.3	1.6	2	0	0	2	2	2	0	Novel	AID	APOBEC	clade	1
WhiA_N	PF10298.9	gi|284161514|ref|YP_003400137.1|	-	0.08	13.0	0.4	0.49	10.5	0.0	2.4	3	0	0	3	3	3	0	WhiA	N-terminal	LAGLIDADG-like	domain
Bd3614-deam	PF14439.6	gi|284161514|ref|YP_003400137.1|	-	0.15	12.2	1.2	0.34	11.0	0.9	1.7	1	1	0	1	1	1	0	Bd3614-like	deaminase
APOBEC_N	PF08210.11	gi|284161514|ref|YP_003400137.1|	-	0.43	10.5	2.6	6.1	6.7	2.6	2.4	1	1	0	1	1	1	0	APOBEC-like	N-terminal	domain
DNA_pol_E_B	PF04042.16	gi|284161515|ref|YP_003400138.1|	-	8.1e-15	54.7	0.0	1.4e-14	54.0	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos	PF00149.28	gi|284161515|ref|YP_003400138.1|	-	1.5e-12	48.5	1.1	2.3e-12	47.8	1.1	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|284161515|ref|YP_003400138.1|	-	2.3e-08	34.4	0.0	5.6e-08	33.1	0.0	1.6	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
tRNA_anti-codon	PF01336.25	gi|284161515|ref|YP_003400138.1|	-	0.00023	21.1	0.6	0.00053	19.9	0.6	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DUF3014	PF11219.8	gi|284161515|ref|YP_003400138.1|	-	0.15	12.3	0.0	0.32	11.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3014)
EAP30	PF04157.16	gi|284161515|ref|YP_003400138.1|	-	0.2	10.9	0.1	0.32	10.2	0.1	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Arg_repressor	PF01316.21	gi|284161516|ref|YP_003400139.1|	-	0.14	12.0	0.2	4.2	7.2	0.1	2.7	2	1	1	3	3	3	0	Arginine	repressor,	DNA	binding	domain
SpoIIM	PF01944.17	gi|284161517|ref|YP_003400140.1|	-	1.2e-36	126.2	13.1	1.4e-36	125.9	13.1	1.0	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
DUF1097	PF06496.11	gi|284161517|ref|YP_003400140.1|	-	0.41	10.7	11.3	0.045	13.9	7.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1097)
Alba	PF01918.21	gi|284161518|ref|YP_003400141.1|	-	1.5e-21	76.0	0.4	2e-21	75.6	0.4	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.8	gi|284161518|ref|YP_003400141.1|	-	0.001	19.0	0.3	0.0015	18.5	0.3	1.3	1	1	0	1	1	1	1	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Mpt_N	PF09176.11	gi|284161518|ref|YP_003400141.1|	-	0.053	13.7	0.1	0.13	12.4	0.1	1.7	1	1	1	2	2	2	0	Methylene-tetrahydromethanopterin	dehydrogenase,	N-terminal
Translin	PF01997.16	gi|284161519|ref|YP_003400142.1|	-	4.2e-07	30.2	1.3	2.5e-05	24.4	1.1	2.7	1	1	0	1	1	1	1	Translin	family
PTS_IIA	PF02255.16	gi|284161519|ref|YP_003400142.1|	-	0.018	15.0	3.1	0.24	11.5	0.1	3.1	3	0	0	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
DUF4363	PF14276.6	gi|284161519|ref|YP_003400142.1|	-	0.023	14.8	4.1	2.4	8.3	0.1	2.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4363)
DUF1771	PF08590.10	gi|284161519|ref|YP_003400142.1|	-	0.052	13.9	0.7	0.25	11.8	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1771)
TPR_2	PF07719.17	gi|284161519|ref|YP_003400142.1|	-	0.06	13.5	1.7	0.68	10.2	0.0	2.9	3	0	0	3	3	3	0	Tetratricopeptide	repeat
MtrB	PF05440.12	gi|284161519|ref|YP_003400142.1|	-	0.087	13.3	0.0	0.32	11.4	0.0	1.9	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
DUF1571	PF07608.11	gi|284161519|ref|YP_003400142.1|	-	0.089	12.2	0.5	0.13	11.6	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1571)
YfdX	PF10938.8	gi|284161519|ref|YP_003400142.1|	-	0.18	11.7	1.6	0.59	10.1	0.2	2.5	2	1	1	3	3	3	0	YfdX	protein
FliS	PF02561.14	gi|284161519|ref|YP_003400142.1|	-	0.61	10.4	4.0	1.4	9.2	0.6	2.7	3	0	0	3	3	3	0	Flagellar	protein	FliS
VWA_CoxE	PF05762.14	gi|284161520|ref|YP_003400143.1|	-	4.7e-08	32.7	0.1	7.3e-08	32.1	0.1	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.6	gi|284161520|ref|YP_003400143.1|	-	1.4e-07	32.1	0.1	5.9e-07	30.1	0.0	2.1	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|284161520|ref|YP_003400143.1|	-	9.3e-05	22.7	3.6	0.00077	19.8	2.2	2.6	2	1	0	2	2	2	1	von	Willebrand	factor	type	A	domain
MCH	PF02289.16	gi|284161520|ref|YP_003400143.1|	-	0.096	12.0	0.0	0.16	11.3	0.0	1.2	1	0	0	1	1	1	0	Cyclohydrolase	(MCH)
AAA_5	PF07728.14	gi|284161521|ref|YP_003400144.1|	-	6.5e-19	68.3	0.1	3.1e-18	66.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|284161521|ref|YP_003400144.1|	-	8.8e-06	25.6	0.0	2.5e-05	24.2	0.0	1.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|284161521|ref|YP_003400144.1|	-	4e-05	24.0	0.1	0.00014	22.3	0.0	2.0	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_lid_8	PF17868.1	gi|284161521|ref|YP_003400144.1|	-	0.0022	17.9	0.5	0.0048	16.8	0.5	1.6	1	0	0	1	1	1	1	AAA	lid	domain
AAA_7	PF12775.7	gi|284161521|ref|YP_003400144.1|	-	0.0022	17.5	0.0	0.0046	16.5	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
AAA_22	PF13401.6	gi|284161521|ref|YP_003400144.1|	-	0.0064	16.8	0.1	0.044	14.1	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_2	PF07724.14	gi|284161521|ref|YP_003400144.1|	-	0.0078	16.3	0.0	0.016	15.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA	PF00004.29	gi|284161521|ref|YP_003400144.1|	-	0.013	15.9	0.0	0.039	14.4	0.0	1.8	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|284161521|ref|YP_003400144.1|	-	0.021	14.7	5.2	0.87	9.4	0.0	2.3	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
Mg_chelatase_C	PF13335.6	gi|284161521|ref|YP_003400144.1|	-	0.024	15.3	0.1	0.093	13.4	0.1	2.1	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI	C-terminal
RsgA_GTPase	PF03193.16	gi|284161521|ref|YP_003400144.1|	-	0.1	12.5	0.1	0.4	10.6	0.0	1.9	2	0	0	2	2	2	0	RsgA	GTPase
Flu_NS2	PF00601.19	gi|284161521|ref|YP_003400144.1|	-	0.14	12.5	0.9	0.52	10.6	0.2	2.1	1	1	1	2	2	2	0	Influenza	non-structural	protein	(NS2)
CBP_BcsF	PF11120.8	gi|284161522|ref|YP_003400145.1|	-	0.11	12.6	0.2	0.11	12.6	0.2	2.8	3	0	0	3	3	3	0	Cellulose	biosynthesis	protein	BcsF
DUF373	PF04123.13	gi|284161522|ref|YP_003400145.1|	-	0.21	11.0	14.1	0.26	10.7	14.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
UPF0182	PF03699.13	gi|284161522|ref|YP_003400145.1|	-	0.28	9.2	9.6	0.33	9.0	9.6	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
SieB	PF14163.6	gi|284161522|ref|YP_003400145.1|	-	1.2	8.6	6.5	5.8	6.4	0.4	2.4	2	0	0	2	2	2	0	Super-infection	exclusion	protein	B
ATP-synt_I	PF03899.15	gi|284161522|ref|YP_003400145.1|	-	2.8	8.4	20.9	0.094	13.1	2.0	2.9	2	1	0	2	2	2	0	ATP	synthase	I	chain
DUF4293	PF14126.6	gi|284161522|ref|YP_003400145.1|	-	3.1	8.0	10.9	6.5	7.0	10.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4293)
DUF3464	PF11947.8	gi|284161522|ref|YP_003400145.1|	-	3.5	7.4	6.1	0.38	10.5	1.6	1.7	2	0	0	2	2	2	0	Photosynthesis	affected	mutant	68
DUF3290	PF11694.8	gi|284161522|ref|YP_003400145.1|	-	8.5	6.3	8.9	0.48	10.4	1.3	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3290)
F420_ligase	PF01996.16	gi|284161524|ref|YP_003400147.1|	-	8.6e-66	221.8	0.1	1e-65	221.5	0.1	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
ATP-synt_F	PF01990.17	gi|284161524|ref|YP_003400147.1|	-	0.071	13.4	0.3	11	6.4	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	(F/14-kDa)	subunit
TPP_enzyme_C	PF02775.21	gi|284161525|ref|YP_003400148.1|	-	2.8e-28	98.6	0.6	2.8e-28	98.6	0.6	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|284161525|ref|YP_003400148.1|	-	5.1e-15	55.8	0.0	9.1e-15	55.0	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|284161525|ref|YP_003400148.1|	-	6.3e-09	35.3	10.7	1.3e-06	27.9	3.5	2.9	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161525|ref|YP_003400148.1|	-	1.5e-08	34.4	19.4	3.6e-06	26.8	3.7	3.0	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284161525|ref|YP_003400148.1|	-	1.6e-07	31.0	11.9	0.00093	19.2	3.5	2.9	2	0	0	2	2	2	2	4Fe-4S	binding	domain
TPP_enzyme_N	PF02776.18	gi|284161525|ref|YP_003400148.1|	-	4.7e-05	23.1	0.2	0.00096	18.8	0.1	2.5	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_9	PF13187.6	gi|284161525|ref|YP_003400148.1|	-	0.00013	22.1	10.1	0.00033	20.8	10.1	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161525|ref|YP_003400148.1|	-	0.00016	21.7	12.2	0.00082	19.4	12.4	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284161525|ref|YP_003400148.1|	-	0.00023	21.4	13.2	0.12	13.0	1.8	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161525|ref|YP_003400148.1|	-	0.0011	19.1	9.2	0.0028	17.7	9.2	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161525|ref|YP_003400148.1|	-	0.0035	17.9	12.2	0.018	15.6	12.0	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161525|ref|YP_003400148.1|	-	0.0098	16.8	11.6	0.017	16.0	3.4	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
PFOR_II	PF17147.4	gi|284161525|ref|YP_003400148.1|	-	0.033	14.5	0.0	0.15	12.3	0.0	2.2	1	0	0	1	1	1	0	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|284161525|ref|YP_003400148.1|	-	0.04	13.8	0.3	0.16	11.8	0.0	2.0	2	0	0	2	2	2	0	Transketolase,	C-terminal	domain
Fer4_8	PF13183.6	gi|284161525|ref|YP_003400148.1|	-	1.9	9.0	13.6	3.1e+03	-1.3	13.6	2.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284161525|ref|YP_003400148.1|	-	2	9.0	11.6	0.88	10.2	3.4	3.0	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|284161525|ref|YP_003400148.1|	-	2.1	9.0	13.9	2.5	8.7	3.1	2.6	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284161525|ref|YP_003400148.1|	-	4.5	8.1	7.9	0.43	11.4	1.2	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Peptidase_S24	PF00717.23	gi|284161526|ref|YP_003400149.1|	-	5e-06	26.4	0.3	1.1e-05	25.2	0.3	1.6	1	1	0	1	1	1	1	Peptidase	S24-like
Fucose_iso_C	PF02952.17	gi|284161527|ref|YP_003400150.1|	-	0.11	12.2	0.1	0.26	11.0	0.1	1.7	1	1	0	1	1	1	0	L-fucose	isomerase,	C-terminal	domain
DUF1843	PF08898.10	gi|284161527|ref|YP_003400150.1|	-	0.14	12.7	0.1	0.36	11.4	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1843)
IGPD	PF00475.18	gi|284161528|ref|YP_003400151.1|	-	3.3e-45	153.9	1.3	5.8e-45	153.1	1.3	1.4	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.21	gi|284161529|ref|YP_003400152.1|	-	1.8e-62	210.8	3.0	2e-62	210.7	3.0	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Trp_syntA	PF00290.20	gi|284161529|ref|YP_003400152.1|	-	3.1e-05	23.0	1.4	0.00014	20.9	0.1	2.0	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
NMO	PF03060.15	gi|284161529|ref|YP_003400152.1|	-	5.3e-05	22.8	0.3	0.00014	21.4	0.1	1.7	2	0	0	2	2	2	1	Nitronate	monooxygenase
Dus	PF01207.17	gi|284161529|ref|YP_003400152.1|	-	0.00035	19.8	0.1	0.00091	18.4	0.0	1.6	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
G3P_antiterm	PF04309.12	gi|284161529|ref|YP_003400152.1|	-	0.00041	19.8	0.2	0.09	12.2	0.0	2.2	2	0	0	2	2	2	2	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.21	gi|284161529|ref|YP_003400152.1|	-	0.00044	19.6	0.1	0.00083	18.6	0.1	1.4	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
TMP-TENI	PF02581.17	gi|284161529|ref|YP_003400152.1|	-	0.00078	18.8	0.7	0.0027	17.0	0.2	2.0	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
NanE	PF04131.14	gi|284161529|ref|YP_003400152.1|	-	0.0036	16.5	0.2	0.056	12.6	0.1	2.3	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IGPS	PF00218.21	gi|284161529|ref|YP_003400152.1|	-	0.0038	16.4	0.1	0.034	13.3	0.0	2.3	2	1	1	3	3	3	1	Indole-3-glycerol	phosphate	synthase
FMN_dh	PF01070.18	gi|284161529|ref|YP_003400152.1|	-	0.016	14.2	0.1	0.026	13.6	0.1	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
ThiG	PF05690.14	gi|284161529|ref|YP_003400152.1|	-	0.019	14.3	0.1	0.046	13.0	0.1	1.6	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.17	gi|284161529|ref|YP_003400152.1|	-	0.029	13.8	1.2	4.2	6.8	0.2	2.2	2	0	0	2	2	2	0	PcrB	family
Ribul_P_3_epim	PF00834.19	gi|284161529|ref|YP_003400152.1|	-	0.07	12.5	0.3	0.76	9.1	0.1	2.4	2	1	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
CBS	PF00571.28	gi|284161530|ref|YP_003400153.1|	-	1.6e-34	118.2	7.1	7.4e-17	61.5	0.6	2.5	2	0	0	2	2	2	2	CBS	domain
Peptidase_M50	PF02163.22	gi|284161530|ref|YP_003400153.1|	-	1.3e-13	50.8	15.5	2.5e-07	30.2	0.5	3.5	1	1	2	3	3	3	2	Peptidase	family	M50
Peptidase_M50B	PF13398.6	gi|284161530|ref|YP_003400153.1|	-	6.3e-06	26.0	7.7	1.1e-05	25.2	7.1	1.7	1	1	0	1	1	1	1	Peptidase	M50B-like
DUF3267	PF11667.8	gi|284161530|ref|YP_003400153.1|	-	7.4e-05	23.0	4.4	7.4e-05	23.0	4.4	2.1	3	0	0	3	3	3	1	Putative	zincin	peptidase
DUF456	PF04306.13	gi|284161530|ref|YP_003400153.1|	-	0.04	14.2	10.8	0.05	13.9	1.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF456)
Molybdopterin_N	PF18364.1	gi|284161530|ref|YP_003400153.1|	-	0.47	10.5	1.2	1.1	9.3	0.1	2.2	2	0	0	2	2	2	0	Molybdopterin	oxidoreductase	N-terminal	domain
FA_desaturase	PF00487.24	gi|284161530|ref|YP_003400153.1|	-	2	8.2	7.2	4.3	7.1	0.1	2.2	2	0	0	2	2	2	0	Fatty	acid	desaturase
RrnaAD	PF00398.20	gi|284161531|ref|YP_003400154.1|	-	2.7e-06	26.7	0.0	4.3e-06	26.0	0.0	1.3	1	1	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
DREV	PF05219.12	gi|284161531|ref|YP_003400154.1|	-	1.7e-05	24.1	0.0	2.6e-05	23.4	0.0	1.4	1	1	0	1	1	1	1	DREV	methyltransferase
Methyltransf_23	PF13489.6	gi|284161531|ref|YP_003400154.1|	-	1.8e-05	24.6	0.0	3.7e-05	23.6	0.0	1.5	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284161531|ref|YP_003400154.1|	-	2e-05	25.1	0.0	3e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|284161531|ref|YP_003400154.1|	-	0.00013	21.6	0.0	0.00016	21.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.19	gi|284161531|ref|YP_003400154.1|	-	0.00035	20.4	0.0	0.00053	19.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.6	gi|284161531|ref|YP_003400154.1|	-	0.00037	21.2	0.0	0.00072	20.2	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|284161531|ref|YP_003400154.1|	-	0.00079	19.2	0.0	0.001	18.9	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_31	PF13847.6	gi|284161531|ref|YP_003400154.1|	-	0.0032	17.3	0.0	0.0043	16.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284161531|ref|YP_003400154.1|	-	0.0057	17.4	0.0	0.0092	16.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|284161531|ref|YP_003400154.1|	-	0.03	13.9	0.0	0.054	13.1	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_32	PF13679.6	gi|284161531|ref|YP_003400154.1|	-	0.047	13.7	0.0	0.085	12.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|284161531|ref|YP_003400154.1|	-	0.073	14.1	0.0	0.13	13.3	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|284161531|ref|YP_003400154.1|	-	0.1	12.1	0.0	0.22	11.0	0.0	1.5	1	1	0	1	1	1	0	Putative	methyltransferase
Radical_SAM	PF04055.21	gi|284161532|ref|YP_003400155.1|	-	2.2e-10	41.2	0.7	5.3e-10	39.9	0.1	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
DUF1848	PF08902.11	gi|284161532|ref|YP_003400155.1|	-	1.7e-08	34.6	6.0	0.00016	21.5	0.0	2.8	2	1	1	3	3	3	2	Domain	of	unknown	function	(DUF1848)
DUF4674	PF15719.5	gi|284161532|ref|YP_003400155.1|	-	0.35	10.9	2.9	0.8	9.7	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4674)
ABC_tran	PF00005.27	gi|284161533|ref|YP_003400156.1|	-	1.1e-31	110.2	0.0	1.6e-31	109.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161533|ref|YP_003400156.1|	-	2.2e-14	54.0	3.4	1.3e-10	41.6	0.1	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161533|ref|YP_003400156.1|	-	2.5e-06	27.1	0.3	0.0001	21.9	0.3	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
ATPase_2	PF01637.18	gi|284161533|ref|YP_003400156.1|	-	0.00023	21.2	0.2	0.00029	20.8	0.2	1.4	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_15	PF13175.6	gi|284161533|ref|YP_003400156.1|	-	0.00089	19.1	2.1	0.13	11.9	0.0	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284161533|ref|YP_003400156.1|	-	0.0033	18.0	1.9	0.0045	17.5	0.8	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284161533|ref|YP_003400156.1|	-	0.0041	17.4	0.3	0.044	14.1	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|284161533|ref|YP_003400156.1|	-	0.0041	16.8	0.1	0.0075	16.0	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SRPRB	PF09439.10	gi|284161533|ref|YP_003400156.1|	-	0.022	14.2	0.4	2.4	7.5	0.0	2.2	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
PIF1	PF05970.14	gi|284161533|ref|YP_003400156.1|	-	0.022	13.9	0.0	0.038	13.2	0.0	1.2	1	0	0	1	1	1	0	PIF1-like	helicase
RuvA_C	PF07499.13	gi|284161533|ref|YP_003400156.1|	-	0.031	14.7	0.0	0.37	11.3	0.0	2.5	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
AAA_14	PF13173.6	gi|284161533|ref|YP_003400156.1|	-	0.036	14.1	0.3	0.26	11.3	0.0	2.4	2	1	1	3	3	3	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|284161533|ref|YP_003400156.1|	-	0.04	13.8	0.0	0.083	12.8	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
RecA	PF00154.21	gi|284161533|ref|YP_003400156.1|	-	0.058	12.8	0.0	0.098	12.1	0.0	1.4	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
SbcCD_C	PF13558.6	gi|284161533|ref|YP_003400156.1|	-	0.061	13.6	0.0	0.12	12.6	0.0	1.6	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.6	gi|284161533|ref|YP_003400156.1|	-	0.064	12.8	0.0	0.18	11.3	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|284161533|ref|YP_003400156.1|	-	0.08	12.1	0.3	0.84	8.8	0.1	2.0	2	0	0	2	2	2	0	NB-ARC	domain
IstB_IS21	PF01695.17	gi|284161533|ref|YP_003400156.1|	-	0.098	12.4	0.1	2.3	7.9	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
MobB	PF03205.14	gi|284161533|ref|YP_003400156.1|	-	0.11	12.4	0.3	0.33	10.8	0.3	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiQ	PF02361.16	gi|284161534|ref|YP_003400157.1|	-	6.8e-27	94.5	26.5	3.5e-23	82.4	4.0	2.4	2	1	1	3	3	3	2	Cobalt	transport	protein
CarboxypepD_reg	PF13620.6	gi|284161535|ref|YP_003400158.1|	-	0.0007	19.8	0.1	0.0012	19.1	0.1	1.4	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
CarbopepD_reg_2	PF13715.6	gi|284161535|ref|YP_003400158.1|	-	0.0053	16.7	0.0	0.0085	16.1	0.0	1.4	1	0	0	1	1	1	1	CarboxypepD_reg-like	domain
bMG3	PF11974.8	gi|284161535|ref|YP_003400158.1|	-	0.028	14.5	0.0	0.035	14.1	0.0	1.2	1	0	0	1	1	1	0	Bacterial	alpha-2-macroglobulin	MG3	domain
Big_6	PF17936.1	gi|284161535|ref|YP_003400158.1|	-	0.028	14.7	0.1	0.052	13.8	0.1	1.5	1	0	0	1	1	1	0	Bacterial	Ig	domain
DUF4249	PF14054.6	gi|284161535|ref|YP_003400158.1|	-	0.039	13.6	0.1	0.044	13.4	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4249)
SdrD_B	PF17210.3	gi|284161535|ref|YP_003400158.1|	-	0.043	14.0	0.1	0.059	13.6	0.1	1.2	1	0	0	1	1	1	0	SdrD	B-like	domain
Pollen_Ole_e_I	PF01190.17	gi|284161535|ref|YP_003400158.1|	-	0.095	13.1	0.0	0.12	12.8	0.0	1.2	1	0	0	1	1	1	0	Pollen	proteins	Ole	e	I	like
CbiM	PF01891.16	gi|284161536|ref|YP_003400159.1|	-	1.9e-53	181.4	20.9	2.1e-53	181.2	20.9	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
FA_desaturase	PF00487.24	gi|284161536|ref|YP_003400159.1|	-	8.6	6.1	9.4	0.34	10.7	2.3	1.9	1	1	1	2	2	2	0	Fatty	acid	desaturase
DUF4198	PF10670.9	gi|284161537|ref|YP_003400160.1|	-	9.6e-25	88.2	0.5	1.3e-24	87.7	0.5	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4198)
HSBP1	PF06825.12	gi|284161537|ref|YP_003400160.1|	-	0.0048	16.7	0.1	0.0077	16.1	0.1	1.3	1	0	0	1	1	1	1	Heat	shock	factor	binding	protein	1
Big_3	PF07523.12	gi|284161537|ref|YP_003400160.1|	-	0.0053	17.0	0.0	0.02	15.2	0.0	1.9	2	0	0	2	2	2	1	Bacterial	Ig-like	domain	(group	3)
DUF5082	PF16888.5	gi|284161537|ref|YP_003400160.1|	-	0.0055	17.0	0.1	0.0089	16.3	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5082)
TMF_DNA_bd	PF12329.8	gi|284161537|ref|YP_003400160.1|	-	0.069	13.1	0.5	0.15	12.1	0.5	1.5	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
Filamin	PF00630.19	gi|284161537|ref|YP_003400160.1|	-	0.089	13.6	0.0	0.21	12.4	0.0	1.6	1	0	0	1	1	1	0	Filamin/ABP280	repeat
CLZ	PF16526.5	gi|284161537|ref|YP_003400160.1|	-	0.15	12.5	0.0	0.29	11.5	0.0	1.5	1	0	0	1	1	1	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
ZapB	PF06005.12	gi|284161537|ref|YP_003400160.1|	-	0.18	12.3	0.0	0.35	11.3	0.0	1.4	1	0	0	1	1	1	0	Cell	division	protein	ZapB
LPP	PF04728.13	gi|284161537|ref|YP_003400160.1|	-	0.18	12.3	0.3	0.35	11.3	0.3	1.4	1	0	0	1	1	1	0	Lipoprotein	leucine-zipper
DHO_dh	PF01180.21	gi|284161538|ref|YP_003400161.1|	-	2.9e-59	200.7	0.0	3.3e-59	200.5	0.0	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|284161538|ref|YP_003400161.1|	-	1.8e-12	47.0	0.0	5e-12	45.5	0.0	1.6	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|284161538|ref|YP_003400161.1|	-	1.1e-07	31.6	0.3	6.5e-06	25.8	0.0	2.1	1	1	1	2	2	2	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|284161538|ref|YP_003400161.1|	-	3.7e-06	26.6	0.1	1.1e-05	25.0	0.0	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
DUF561	PF04481.12	gi|284161538|ref|YP_003400161.1|	-	0.0011	18.2	0.1	0.0029	16.8	0.1	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF561)
FMN_dh	PF01070.18	gi|284161538|ref|YP_003400161.1|	-	0.0059	15.7	0.1	0.0099	14.9	0.1	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|284161538|ref|YP_003400161.1|	-	0.0072	15.4	0.0	0.013	14.5	0.0	1.4	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
G3P_antiterm	PF04309.12	gi|284161538|ref|YP_003400161.1|	-	0.071	12.5	0.1	0.28	10.6	0.0	2.0	1	1	1	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
IGPS	PF00218.21	gi|284161538|ref|YP_003400161.1|	-	0.18	10.9	0.0	1.7	7.7	0.0	2.0	2	0	0	2	2	2	0	Indole-3-glycerol	phosphate	synthase
DUF3796	PF12676.7	gi|284161539|ref|YP_003400162.1|	-	4.1e-05	24.0	7.9	4.5e-05	23.9	7.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3796)
Y1_Tnp	PF01797.16	gi|284161541|ref|YP_003400164.1|	-	2.8e-38	130.7	0.1	3.3e-38	130.5	0.1	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
OrfB_Zn_ribbon	PF07282.11	gi|284161542|ref|YP_003400165.1|	-	2.1e-21	75.6	0.2	3.7e-21	74.8	0.2	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284161542|ref|YP_003400165.1|	-	8.7e-19	67.9	0.0	1.5e-18	67.1	0.0	1.4	1	0	0	1	1	1	1	Probable	transposase
HTH_OrfB_IS605	PF12323.8	gi|284161542|ref|YP_003400165.1|	-	4.3e-05	22.9	0.3	0.00011	21.7	0.3	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161542|ref|YP_003400165.1|	-	0.0012	18.8	2.3	0.0027	17.6	2.3	1.6	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
C1_1	PF00130.22	gi|284161542|ref|YP_003400165.1|	-	0.027	14.3	0.9	0.052	13.4	0.9	1.4	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
CpXC	PF14353.6	gi|284161542|ref|YP_003400165.1|	-	0.029	14.4	0.1	0.1	12.6	0.1	1.8	1	1	1	2	2	2	0	CpXC	protein
PhnA_Zn_Ribbon	PF08274.12	gi|284161542|ref|YP_003400165.1|	-	0.059	13.3	0.4	0.11	12.4	0.4	1.4	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
Vps36-NZF-N	PF16988.5	gi|284161542|ref|YP_003400165.1|	-	0.075	12.4	0.0	0.19	11.2	0.0	1.6	1	0	0	1	1	1	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
TackOD1	PF18551.1	gi|284161542|ref|YP_003400165.1|	-	0.12	12.0	0.6	0.23	11.1	0.6	1.3	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
TFIIS_C	PF01096.18	gi|284161542|ref|YP_003400165.1|	-	1.9	8.4	4.0	60	3.6	4.0	2.5	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
HIT	PF01230.23	gi|284161544|ref|YP_003400167.1|	-	2.6e-26	92.2	0.4	3.1e-26	92.0	0.4	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.8	gi|284161544|ref|YP_003400167.1|	-	3.1e-14	53.4	0.6	4e-14	53.1	0.6	1.1	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.15	gi|284161544|ref|YP_003400167.1|	-	7.4e-08	32.3	0.5	9.3e-08	32.0	0.5	1.2	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DFP	PF04127.15	gi|284161545|ref|YP_003400168.1|	-	7.2e-54	182.4	0.1	3.9e-52	176.8	0.1	2.1	2	0	0	2	2	2	2	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|284161545|ref|YP_003400168.1|	-	7e-34	116.9	0.5	3.5e-33	114.6	0.0	2.1	2	0	0	2	2	2	1	Flavoprotein
NPV_P10	PF05531.12	gi|284161545|ref|YP_003400168.1|	-	0.024	15.1	0.6	1.5	9.4	0.0	2.7	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Na_H_Exchanger	PF00999.21	gi|284161546|ref|YP_003400169.1|	-	4.5e-50	170.5	56.6	5.3e-50	170.3	56.6	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_C	PF02080.21	gi|284161547|ref|YP_003400170.1|	-	2.6e-09	36.8	0.8	2.9e-08	33.4	0.0	3.0	4	0	0	4	4	4	1	TrkA-C	domain
Guanylate_cyc	PF00211.20	gi|284161548|ref|YP_003400171.1|	-	0.0043	16.7	0.0	0.0068	16.1	0.0	1.3	1	0	0	1	1	1	1	Adenylate	and	Guanylate	cyclase	catalytic	domain
GHMP_kinases_N	PF00288.26	gi|284161549|ref|YP_003400172.1|	-	3.7e-09	36.7	0.5	6.9e-09	35.8	0.5	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF1335	PF07056.11	gi|284161549|ref|YP_003400172.1|	-	0.16	12.1	0.0	21	5.2	0.0	2.7	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1335)
HTH_24	PF13412.6	gi|284161550|ref|YP_003400173.1|	-	5.2e-15	54.7	0.6	1e-14	53.8	0.6	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|284161550|ref|YP_003400173.1|	-	2.1e-13	49.9	0.0	3.1e-13	49.3	0.0	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.21	gi|284161550|ref|YP_003400173.1|	-	1.2e-05	25.2	0.0	0.00016	21.6	0.0	2.1	2	0	0	2	2	2	1	Lrp/AsnC	ligand	binding	domain
HTH_Crp_2	PF13545.6	gi|284161550|ref|YP_003400173.1|	-	0.00017	21.5	0.0	0.00029	20.8	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161550|ref|YP_003400173.1|	-	0.00036	20.3	0.1	0.00067	19.5	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.22	gi|284161550|ref|YP_003400173.1|	-	0.00045	20.1	0.0	0.00078	19.3	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|284161550|ref|YP_003400173.1|	-	0.00098	19.0	0.0	0.0017	18.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|284161550|ref|YP_003400173.1|	-	0.0041	17.0	0.1	0.0064	16.4	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_Mga	PF08280.11	gi|284161550|ref|YP_003400173.1|	-	0.025	14.6	0.0	0.039	14.0	0.0	1.3	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_IclR	PF09339.10	gi|284161550|ref|YP_003400173.1|	-	0.032	14.0	0.0	0.059	13.2	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_1	PF00126.27	gi|284161550|ref|YP_003400173.1|	-	0.037	14.0	0.0	0.067	13.2	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Fe_dep_repress	PF01325.19	gi|284161550|ref|YP_003400173.1|	-	0.063	13.5	0.0	0.1	12.8	0.0	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_3	PF01381.22	gi|284161550|ref|YP_003400173.1|	-	0.065	13.3	0.0	0.12	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix
HTH_28	PF13518.6	gi|284161550|ref|YP_003400173.1|	-	0.066	13.3	0.0	0.1	12.7	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|284161550|ref|YP_003400173.1|	-	0.087	12.7	0.2	0.28	11.1	0.1	1.8	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.17	gi|284161550|ref|YP_003400173.1|	-	0.096	12.6	0.2	0.16	11.9	0.2	1.3	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_36	PF13730.6	gi|284161550|ref|YP_003400173.1|	-	0.11	12.5	0.0	0.18	11.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_20	PF12840.7	gi|284161550|ref|YP_003400173.1|	-	0.12	12.5	0.0	0.23	11.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|284161550|ref|YP_003400173.1|	-	0.14	12.1	0.0	0.23	11.4	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|284161550|ref|YP_003400173.1|	-	0.14	11.9	0.0	0.23	11.3	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_WhiA	PF02650.14	gi|284161550|ref|YP_003400173.1|	-	0.19	12.1	0.1	0.32	11.3	0.1	1.4	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
HTH_Tnp_ISL3	PF13542.6	gi|284161550|ref|YP_003400173.1|	-	0.22	11.0	0.0	0.43	10.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
CDP-OH_P_transf	PF01066.21	gi|284161551|ref|YP_003400174.1|	-	6.9e-14	52.4	1.0	6.9e-14	52.4	1.0	2.0	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DUF2878	PF11086.8	gi|284161551|ref|YP_003400174.1|	-	0.32	11.2	4.5	0.081	13.1	1.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2878)
DUF92	PF01940.16	gi|284161551|ref|YP_003400174.1|	-	0.42	10.0	4.5	4.4	6.7	0.4	2.2	1	1	0	2	2	2	0	Integral	membrane	protein	DUF92
ParA	PF10609.9	gi|284161552|ref|YP_003400175.1|	-	1.2e-83	280.3	0.0	1.6e-83	280.0	0.0	1.1	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|284161552|ref|YP_003400175.1|	-	9.5e-09	35.4	0.0	1.7e-08	34.6	0.0	1.5	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|284161552|ref|YP_003400175.1|	-	1.4e-06	28.4	0.7	0.00023	21.1	0.4	2.5	2	1	1	3	3	3	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|284161552|ref|YP_003400175.1|	-	0.00014	21.2	3.9	0.00042	19.6	1.7	2.3	2	1	0	2	2	2	1	Anion-transporting	ATPase
RsgA_GTPase	PF03193.16	gi|284161552|ref|YP_003400175.1|	-	0.001	19.0	0.4	0.001	19.0	0.4	1.5	2	0	0	2	2	2	1	RsgA	GTPase
MipZ	PF09140.11	gi|284161552|ref|YP_003400175.1|	-	0.0017	17.7	0.0	0.0036	16.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	MipZ
SRP54	PF00448.22	gi|284161552|ref|YP_003400175.1|	-	0.0092	15.6	0.6	0.017	14.7	0.6	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Fer4_NifH	PF00142.18	gi|284161552|ref|YP_003400175.1|	-	0.08	12.4	0.1	0.15	11.5	0.1	1.5	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_25	PF13481.6	gi|284161552|ref|YP_003400175.1|	-	0.081	12.5	0.1	0.16	11.6	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
CLP1_P	PF16575.5	gi|284161552|ref|YP_003400175.1|	-	0.18	11.5	0.0	0.39	10.5	0.0	1.5	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
DUF1351	PF07083.11	gi|284161552|ref|YP_003400175.1|	-	0.2	11.4	1.9	0.28	10.9	1.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1351)
DUF5528	PF17666.1	gi|284161552|ref|YP_003400175.1|	-	0.26	11.2	3.3	0.39	10.7	3.3	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5528)
CbiA	PF01656.23	gi|284161553|ref|YP_003400176.1|	-	3.8e-17	62.5	0.0	4.8e-17	62.2	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4	PF00037.27	gi|284161553|ref|YP_003400176.1|	-	9.6e-11	41.0	11.6	3e-06	26.8	1.3	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
ParA	PF10609.9	gi|284161553|ref|YP_003400176.1|	-	1e-10	41.5	0.5	0.00047	19.7	0.1	2.7	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
Fer4_7	PF12838.7	gi|284161553|ref|YP_003400176.1|	-	3.8e-10	40.2	4.0	0.00011	22.7	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161553|ref|YP_003400176.1|	-	1.1e-07	31.9	8.7	2.5e-07	30.7	8.7	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161553|ref|YP_003400176.1|	-	1e-06	29.6	2.9	0.0034	18.3	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
AAA_31	PF13614.6	gi|284161553|ref|YP_003400176.1|	-	1.8e-06	28.0	0.8	0.012	15.6	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Fer4_9	PF13187.6	gi|284161553|ref|YP_003400176.1|	-	1.1e-05	25.4	9.1	2.2e-05	24.5	9.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161553|ref|YP_003400176.1|	-	4.3e-05	23.5	10.8	0.0016	18.5	12.2	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284161553|ref|YP_003400176.1|	-	6.1e-05	22.9	13.0	0.034	14.2	2.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284161553|ref|YP_003400176.1|	-	0.00029	21.2	3.0	0.53	10.8	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284161553|ref|YP_003400176.1|	-	0.00096	19.7	5.4	0.5	11.0	0.8	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
RsgA_GTPase	PF03193.16	gi|284161553|ref|YP_003400176.1|	-	0.0013	18.6	1.2	0.033	14.1	0.0	2.2	2	0	0	2	2	2	1	RsgA	GTPase
Fer4_2	PF12797.7	gi|284161553|ref|YP_003400176.1|	-	0.003	17.6	11.0	0.19	11.9	1.8	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
AAA_16	PF13191.6	gi|284161553|ref|YP_003400176.1|	-	0.036	14.5	0.0	0.16	12.4	0.0	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
GTP_EFTU	PF00009.27	gi|284161553|ref|YP_003400176.1|	-	0.04	13.5	0.7	0.09	12.3	0.0	1.8	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
Fer4_3	PF12798.7	gi|284161553|ref|YP_003400176.1|	-	0.046	14.7	13.8	1.7	9.8	1.8	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
ArsA_ATPase	PF02374.15	gi|284161553|ref|YP_003400176.1|	-	0.063	12.4	7.4	0.14	11.3	3.4	2.3	2	0	0	2	2	2	0	Anion-transporting	ATPase
AAA_26	PF13500.6	gi|284161553|ref|YP_003400176.1|	-	0.078	12.8	0.2	0.078	12.8	0.2	2.2	2	1	0	2	2	2	0	AAA	domain
PCP_red	PF08369.10	gi|284161553|ref|YP_003400176.1|	-	0.13	12.5	0.1	0.64	10.3	0.0	2.2	2	0	0	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
AAA_30	PF13604.6	gi|284161553|ref|YP_003400176.1|	-	0.4	10.4	2.3	3	7.5	1.3	2.1	2	0	0	2	2	2	0	AAA	domain
Fer4_15	PF13459.6	gi|284161553|ref|YP_003400176.1|	-	1.4	9.7	12.8	1.9	9.3	2.2	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|284161553|ref|YP_003400176.1|	-	5.4	7.8	18.3	2.5	8.8	2.9	3.0	4	0	0	4	4	2	0	4Fe-4S	binding	domain
CbiA	PF01656.23	gi|284161554|ref|YP_003400177.1|	-	3.4e-16	59.5	0.0	4.6e-16	59.1	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|284161554|ref|YP_003400177.1|	-	6.6e-11	42.1	0.0	4.5e-05	23.0	0.0	3.1	2	1	1	3	3	3	2	NUBPL	iron-transfer	P-loop	NTPase
AAA_31	PF13614.6	gi|284161554|ref|YP_003400177.1|	-	9.8e-10	38.6	0.8	0.00047	20.1	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
Fer4	PF00037.27	gi|284161554|ref|YP_003400177.1|	-	2.3e-09	36.7	16.8	4.2e-06	26.3	3.0	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161554|ref|YP_003400177.1|	-	0.00035	20.5	16.8	0.04	14.0	3.7	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284161554|ref|YP_003400177.1|	-	0.00062	19.9	9.3	0.00062	19.9	9.3	2.6	2	2	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161554|ref|YP_003400177.1|	-	0.0012	18.8	15.9	0.0042	17.1	2.5	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161554|ref|YP_003400177.1|	-	0.0024	18.4	10.4	0.0024	18.4	10.4	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161554|ref|YP_003400177.1|	-	0.0051	16.9	8.8	0.0051	16.9	8.8	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
AAA_25	PF13481.6	gi|284161554|ref|YP_003400177.1|	-	0.0059	16.2	0.0	0.0092	15.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Fer4_16	PF13484.6	gi|284161554|ref|YP_003400177.1|	-	0.019	15.9	14.3	0.58	11.1	1.8	2.7	2	1	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
ArsA_ATPase	PF02374.15	gi|284161554|ref|YP_003400177.1|	-	0.02	14.1	3.7	0.45	9.7	0.9	2.5	3	0	0	3	3	3	0	Anion-transporting	ATPase
PhoH	PF02562.16	gi|284161554|ref|YP_003400177.1|	-	0.19	11.2	0.8	0.28	10.6	0.8	1.2	1	0	0	1	1	1	0	PhoH-like	protein
Fer4_17	PF13534.6	gi|284161554|ref|YP_003400177.1|	-	0.65	10.6	13.0	2.8	8.6	2.0	2.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161554|ref|YP_003400177.1|	-	1.6	8.9	18.5	0.094	12.8	10.9	2.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Nitro_FeMo-Co	PF02579.17	gi|284161555|ref|YP_003400178.1|	-	1.1e-24	86.5	0.4	1.3e-24	86.3	0.4	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
NifU	PF01106.17	gi|284161555|ref|YP_003400178.1|	-	0.056	13.6	0.5	2.7	8.2	0.0	2.3	2	0	0	2	2	2	0	NifU-like	domain
DUF5612	PF18462.1	gi|284161556|ref|YP_003400179.1|	-	1.6e-70	235.5	3.4	2.9e-70	234.6	3.4	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5612)
ACT	PF01842.25	gi|284161556|ref|YP_003400179.1|	-	2.1e-08	33.8	0.0	1.2e-07	31.4	0.0	2.0	2	0	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|284161556|ref|YP_003400179.1|	-	2.4e-06	28.1	0.1	8.8e-06	26.2	0.1	1.9	1	1	0	1	1	1	1	ACT	domain
MobB	PF03205.14	gi|284161557|ref|YP_003400180.1|	-	2.5e-32	111.6	0.1	3e-32	111.3	0.1	1.1	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATPase_2	PF01637.18	gi|284161557|ref|YP_003400180.1|	-	0.031	14.2	0.1	0.032	14.2	0.1	1.3	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
YjeF_N	PF03853.15	gi|284161557|ref|YP_003400180.1|	-	0.051	13.5	0.0	0.067	13.1	0.0	1.2	1	0	0	1	1	1	0	YjeF-related	protein	N-terminus
PRK	PF00485.18	gi|284161557|ref|YP_003400180.1|	-	0.063	13.0	0.2	0.93	9.2	0.0	2.1	1	1	1	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_15	PF13175.6	gi|284161557|ref|YP_003400180.1|	-	0.087	12.5	0.2	0.17	11.6	0.1	1.4	1	1	1	2	2	2	0	AAA	ATPase	domain
CbiA	PF01656.23	gi|284161557|ref|YP_003400180.1|	-	0.089	12.8	0.1	0.11	12.6	0.1	1.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MMR_HSR1	PF01926.23	gi|284161557|ref|YP_003400180.1|	-	0.1	12.7	0.8	0.28	11.3	0.8	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Beta-Casp	PF10996.8	gi|284161558|ref|YP_003400181.1|	-	1.1e-27	96.5	0.0	2.5e-27	95.3	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
KH_7	PF17214.3	gi|284161558|ref|YP_003400181.1|	-	3.3e-27	94.2	7.7	2.3e-25	88.3	3.0	2.7	2	0	0	2	2	2	2	KH	domain
RMMBL	PF07521.12	gi|284161558|ref|YP_003400181.1|	-	1e-17	63.8	0.0	2.6e-17	62.5	0.0	1.8	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|284161558|ref|YP_003400181.1|	-	4.4e-15	56.2	0.0	3e-11	43.7	0.0	2.3	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_6	PF16661.5	gi|284161558|ref|YP_003400181.1|	-	1e-10	41.4	0.0	1.8e-10	40.6	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|284161558|ref|YP_003400181.1|	-	2.7e-08	33.6	0.0	4.9e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.17	gi|284161558|ref|YP_003400181.1|	-	0.0001	22.0	0.2	0.0001	22.0	0.2	3.3	3	0	0	3	3	3	1	KH	domain
KH_4	PF13083.6	gi|284161558|ref|YP_003400181.1|	-	0.00031	20.6	0.4	0.0018	18.1	0.2	2.3	2	0	0	2	2	2	1	KH	domain
Lactamase_B_3	PF13483.6	gi|284161558|ref|YP_003400181.1|	-	0.0004	20.3	0.0	0.00087	19.2	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_1	PF00013.29	gi|284161558|ref|YP_003400181.1|	-	0.0011	18.7	0.1	0.028	14.3	0.1	2.7	2	0	0	2	2	2	1	KH	domain
Proteasome	PF00227.26	gi|284161559|ref|YP_003400182.1|	-	7.8e-57	191.8	0.3	9.1e-57	191.6	0.3	1.0	1	0	0	1	1	1	1	Proteasome	subunit
NAD_binding_5	PF07994.12	gi|284161560|ref|YP_003400183.1|	-	2.4e-44	152.1	0.0	2.5e-40	138.9	0.0	2.0	1	1	1	2	2	2	2	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.17	gi|284161560|ref|YP_003400183.1|	-	3.9e-26	91.4	0.0	6.8e-26	90.6	0.0	1.4	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
tRNA-synt_1e	PF01406.19	gi|284161561|ref|YP_003400184.1|	-	1.4e-127	425.2	0.5	1.9e-127	424.8	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|284161561|ref|YP_003400184.1|	-	1.1e-18	67.1	2.5	8.2e-09	34.7	0.6	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.18	gi|284161561|ref|YP_003400184.1|	-	1.8e-10	40.3	0.4	1.6e-06	27.3	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1	PF00133.22	gi|284161561|ref|YP_003400184.1|	-	1.9e-10	39.7	0.0	1.7e-08	33.2	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.11	gi|284161561|ref|YP_003400184.1|	-	7.3e-09	36.0	0.2	7.3e-09	36.0	0.2	2.2	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1c	PF00749.21	gi|284161561|ref|YP_003400184.1|	-	0.0068	15.3	1.1	0.06	12.2	0.8	2.4	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
DUF2993	PF11209.8	gi|284161562|ref|YP_003400185.1|	-	0.16	12.2	0.0	0.23	11.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2993)
UPF0146	PF03686.13	gi|284161563|ref|YP_003400186.1|	-	5.2e-36	123.4	0.1	5.8e-36	123.2	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
Methyltransf_23	PF13489.6	gi|284161563|ref|YP_003400186.1|	-	0.004	17.0	0.0	0.0058	16.5	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Mu-transpos_C	PF09299.11	gi|284161563|ref|YP_003400186.1|	-	0.026	14.4	0.1	0.068	13.1	0.1	1.7	1	0	0	1	1	1	0	Mu	transposase,	C-terminal
Acetyltransf_1	PF00583.25	gi|284161564|ref|YP_003400187.1|	-	4.9e-23	81.6	0.0	6.1e-23	81.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|284161564|ref|YP_003400187.1|	-	2.7e-18	66.1	0.0	3.2e-18	65.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|284161564|ref|YP_003400187.1|	-	4e-16	59.2	0.1	5.4e-16	58.8	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|284161564|ref|YP_003400187.1|	-	7e-11	41.9	0.0	1e-10	41.4	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|284161564|ref|YP_003400187.1|	-	1e-09	38.5	0.0	4.3e-09	36.5	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|284161564|ref|YP_003400187.1|	-	4.3e-08	33.4	0.0	5.9e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|284161564|ref|YP_003400187.1|	-	3e-06	27.9	0.0	4e-06	27.5	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|284161564|ref|YP_003400187.1|	-	4.2e-05	23.3	0.0	9.2e-05	22.2	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|284161564|ref|YP_003400187.1|	-	0.0001	22.3	0.0	0.00018	21.6	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
PanZ	PF12568.8	gi|284161564|ref|YP_003400187.1|	-	0.0026	17.5	0.0	0.0031	17.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain,	PanZ
Acetyltransf_15	PF17013.5	gi|284161564|ref|YP_003400187.1|	-	0.0079	15.7	0.7	0.0098	15.4	0.7	1.3	1	1	0	1	1	1	1	Putative	acetyl-transferase
GNAT_acetyltran	PF12746.7	gi|284161564|ref|YP_003400187.1|	-	0.016	14.8	0.0	0.02	14.5	0.0	1.2	1	0	0	1	1	1	0	GNAT	acetyltransferase
Acetyltransf_13	PF13880.6	gi|284161564|ref|YP_003400187.1|	-	0.022	14.7	0.0	0.039	13.9	0.0	1.3	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Acetyltransf_6	PF13480.7	gi|284161564|ref|YP_003400187.1|	-	0.067	13.3	0.0	0.095	12.9	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Nudix_hydro	PF18290.1	gi|284161564|ref|YP_003400187.1|	-	0.073	13.1	0.0	1.7	8.7	0.0	2.1	2	0	0	2	2	2	0	Nudix	hydrolase	domain
UPF0058	PF01893.16	gi|284161565|ref|YP_003400188.1|	-	6.7e-24	84.0	2.0	7.4e-24	83.9	2.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0058
PP2C	PF00481.21	gi|284161565|ref|YP_003400188.1|	-	0.18	11.4	0.0	0.21	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	phosphatase	2C
HTH_Tnp_ISL3	PF13542.6	gi|284161566|ref|YP_003400189.1|	-	2.8e-05	23.4	0.1	4.2e-05	22.9	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
DprA_WH	PF17782.1	gi|284161566|ref|YP_003400189.1|	-	0.00024	21.2	0.0	0.00027	21.0	0.0	1.1	1	0	0	1	1	1	1	DprA	winged	helix	domain
GntR	PF00392.21	gi|284161566|ref|YP_003400189.1|	-	0.0011	18.6	0.1	0.0012	18.5	0.1	1.1	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
CENP-B_N	PF04218.13	gi|284161566|ref|YP_003400189.1|	-	0.0025	17.4	0.0	0.0043	16.6	0.0	1.4	1	1	0	1	1	1	1	CENP-B	N-terminal	DNA-binding	domain
TBPIP	PF07106.13	gi|284161566|ref|YP_003400189.1|	-	0.006	16.5	0.0	0.007	16.3	0.0	1.1	1	0	0	1	1	1	1	TBPIP/Hop2	winged	helix	domain
DUF977	PF06163.11	gi|284161566|ref|YP_003400189.1|	-	0.0087	16.0	0.0	0.0096	15.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF977)
GPP34	PF05719.11	gi|284161566|ref|YP_003400189.1|	-	0.014	15.5	0.0	0.019	15.0	0.0	1.3	1	1	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
HTH_IclR	PF09339.10	gi|284161566|ref|YP_003400189.1|	-	0.022	14.6	0.0	0.03	14.1	0.0	1.1	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TrmB	PF01978.19	gi|284161566|ref|YP_003400189.1|	-	0.038	13.9	0.0	0.056	13.3	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
FaeA	PF04703.12	gi|284161566|ref|YP_003400189.1|	-	0.046	14.1	0.0	0.13	12.6	0.0	1.7	1	1	1	2	2	2	0	FaeA-like	protein
E3_UFM1_ligase	PF09743.9	gi|284161566|ref|YP_003400189.1|	-	0.056	13.1	0.0	0.063	12.9	0.0	1.0	1	0	0	1	1	1	0	E3	UFM1-protein	ligase	1
DUF3253	PF11625.8	gi|284161566|ref|YP_003400189.1|	-	0.056	13.7	0.1	0.1	12.8	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3253)
Rrf2	PF02082.20	gi|284161566|ref|YP_003400189.1|	-	0.061	13.7	0.0	0.074	13.4	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_28	PF13518.6	gi|284161566|ref|YP_003400189.1|	-	0.062	13.4	0.0	0.14	12.3	0.0	1.8	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.12	gi|284161566|ref|YP_003400189.1|	-	0.064	13.0	0.0	0.094	12.5	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
FeoC	PF09012.10	gi|284161566|ref|YP_003400189.1|	-	0.098	12.7	0.0	0.12	12.5	0.0	1.1	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
FtsK_gamma	PF09397.10	gi|284161566|ref|YP_003400189.1|	-	0.1	12.4	0.0	0.13	12.1	0.0	1.1	1	0	0	1	1	1	0	Ftsk	gamma	domain
HTH_29	PF13551.6	gi|284161566|ref|YP_003400189.1|	-	0.14	12.2	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
Ribosomal_S25	PF03297.15	gi|284161567|ref|YP_003400190.1|	-	2.6e-07	30.8	0.3	4.4e-07	30.0	0.3	1.3	1	0	0	1	1	1	1	S25	ribosomal	protein
GntR	PF00392.21	gi|284161567|ref|YP_003400190.1|	-	1.8e-05	24.3	0.5	4.7e-05	23.0	0.5	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_DeoR	PF08220.12	gi|284161567|ref|YP_003400190.1|	-	3.6e-05	23.4	0.4	7.2e-05	22.4	0.4	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
EAP30	PF04157.16	gi|284161567|ref|YP_003400190.1|	-	0.013	14.8	0.0	0.018	14.4	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Rrf2	PF02082.20	gi|284161567|ref|YP_003400190.1|	-	0.048	14.0	0.1	0.13	12.6	0.1	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.12	gi|284161567|ref|YP_003400190.1|	-	0.059	13.3	0.3	0.28	11.2	0.2	2.2	2	1	0	2	2	2	0	HTH	domain
HTH_20	PF12840.7	gi|284161567|ref|YP_003400190.1|	-	0.16	12.1	0.0	0.65	10.1	0.1	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|284161568|ref|YP_003400191.1|	-	9.4e-06	25.5	0.3	2.6e-05	24.1	0.3	1.8	1	0	0	1	1	1	1	HTH	domain
AAA_lid_2	PF17863.1	gi|284161568|ref|YP_003400191.1|	-	0.001	18.9	0.0	0.0018	18.1	0.0	1.3	1	0	0	1	1	1	1	AAA	lid	domain
HTH_20	PF12840.7	gi|284161568|ref|YP_003400191.1|	-	0.001	19.0	0.0	0.017	15.2	0.0	2.5	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|284161569|ref|YP_003400192.1|	-	1.3e-05	25.2	2.2	3.7e-05	23.7	0.6	2.6	2	1	0	2	2	1	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|284161569|ref|YP_003400192.1|	-	2.2e-05	24.1	0.0	3.8e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
Trp_repressor	PF01371.19	gi|284161569|ref|YP_003400192.1|	-	2.5e-05	24.3	0.4	5.7e-05	23.2	0.2	1.8	1	1	0	1	1	1	1	Trp	repressor	protein
Sigma70_r4_2	PF08281.12	gi|284161569|ref|YP_003400192.1|	-	0.00031	20.3	1.5	0.00046	19.8	0.1	2.1	3	0	0	3	3	1	1	Sigma-70,	region	4
DUF2802	PF10975.8	gi|284161569|ref|YP_003400192.1|	-	0.0016	18.6	2.6	0.052	13.7	0.1	2.7	2	2	0	2	2	2	1	Protein	of	unknown	function	(DUF2802)
ABC_tran_CTD	PF16326.5	gi|284161569|ref|YP_003400192.1|	-	0.0025	18.0	7.0	0.0068	16.6	7.0	1.7	1	0	0	1	1	1	1	ABC	transporter	C-terminal	domain
HTH_24	PF13412.6	gi|284161569|ref|YP_003400192.1|	-	0.0027	17.2	0.1	0.016	14.8	0.0	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_3	PF01381.22	gi|284161569|ref|YP_003400192.1|	-	0.0038	17.3	0.3	0.008	16.2	0.3	1.6	1	1	0	1	1	1	1	Helix-turn-helix
RSB_motif	PF16294.5	gi|284161569|ref|YP_003400192.1|	-	0.0061	16.8	0.3	0.01	16.1	0.3	1.4	1	0	0	1	1	1	1	RNSP1-SAP18	binding	(RSB)	motif
HTH_40	PF14493.6	gi|284161569|ref|YP_003400192.1|	-	0.0069	16.8	6.6	0.024	15.1	6.6	2.0	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|284161569|ref|YP_003400192.1|	-	0.0082	15.9	0.2	0.031	14.0	0.2	2.0	1	1	0	1	1	1	1	Helix-turn-helix	domain
TnsD	PF15978.5	gi|284161569|ref|YP_003400192.1|	-	0.0096	14.9	4.5	0.012	14.7	4.5	1.1	1	0	0	1	1	1	1	Tn7-like	transposition	protein	D
DUF16	PF01519.16	gi|284161569|ref|YP_003400192.1|	-	0.01	16.3	8.4	0.01	16.3	8.4	2.0	2	1	1	3	3	2	0	Protein	of	unknown	function	DUF16
XhlA	PF10779.9	gi|284161569|ref|YP_003400192.1|	-	0.011	16.0	10.8	0.011	16.0	10.8	1.9	2	0	0	2	2	2	0	Haemolysin	XhlA
Death	PF00531.22	gi|284161569|ref|YP_003400192.1|	-	0.027	14.6	0.2	0.12	12.6	0.0	2.0	1	1	1	2	2	2	0	Death	domain
Sigma70_r4	PF04545.16	gi|284161569|ref|YP_003400192.1|	-	0.028	13.9	0.0	0.068	12.7	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
DUF4164	PF13747.6	gi|284161569|ref|YP_003400192.1|	-	0.032	14.5	8.0	0.052	13.8	8.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4164)
Spc7	PF08317.11	gi|284161569|ref|YP_003400192.1|	-	0.035	13.0	9.2	0.042	12.7	9.2	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Fungal_TACC	PF12709.7	gi|284161569|ref|YP_003400192.1|	-	0.041	14.3	14.0	0.36	11.3	2.8	2.5	1	1	1	2	2	2	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
HTH_29	PF13551.6	gi|284161569|ref|YP_003400192.1|	-	0.06	13.4	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_25	PF13413.6	gi|284161569|ref|YP_003400192.1|	-	0.061	13.2	1.0	0.51	10.2	0.1	2.4	1	1	1	2	2	2	0	Helix-turn-helix	domain
Snf7	PF03357.21	gi|284161569|ref|YP_003400192.1|	-	0.062	12.9	12.6	0.3	10.7	0.7	2.8	1	1	0	2	2	2	0	Snf7
MerR-DNA-bind	PF09278.11	gi|284161569|ref|YP_003400192.1|	-	0.071	13.7	1.3	0.14	12.7	0.8	1.8	1	1	0	1	1	1	0	MerR,	DNA	binding
HTH_28	PF13518.6	gi|284161569|ref|YP_003400192.1|	-	0.083	13.0	0.0	0.15	12.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Peptidase_S46	PF10459.9	gi|284161569|ref|YP_003400192.1|	-	0.091	11.4	3.5	0.092	11.4	3.5	1.0	1	0	0	1	1	1	0	Peptidase	S46
ATG16	PF08614.11	gi|284161569|ref|YP_003400192.1|	-	0.096	12.9	7.1	0.14	12.4	6.9	1.4	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
CREPT	PF16566.5	gi|284161569|ref|YP_003400192.1|	-	0.1	12.7	6.5	0.14	12.3	6.1	1.5	1	1	0	1	1	1	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
FapA	PF03961.13	gi|284161569|ref|YP_003400192.1|	-	0.17	10.4	11.2	0.22	10.1	11.2	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
MSG	PF02349.15	gi|284161569|ref|YP_003400192.1|	-	0.2	11.9	7.5	0.36	11.1	7.2	1.6	1	1	0	1	1	1	0	Major	surface	glycoprotein
Med4	PF10018.9	gi|284161569|ref|YP_003400192.1|	-	0.25	11.0	5.1	0.28	10.9	5.1	1.3	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DUF724	PF05266.14	gi|284161569|ref|YP_003400192.1|	-	0.25	11.1	8.9	0.39	10.5	8.9	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
RNA_pol_N	PF01194.17	gi|284161569|ref|YP_003400192.1|	-	0.33	11.3	1.8	16	5.9	0.1	2.6	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
AAA_23	PF13476.6	gi|284161569|ref|YP_003400192.1|	-	0.57	10.6	12.6	0.76	10.2	12.6	1.3	1	0	0	1	1	1	0	AAA	domain
Syntaxin_2	PF14523.6	gi|284161569|ref|YP_003400192.1|	-	0.75	10.2	10.3	0.46	10.9	7.8	2.0	2	1	0	2	2	2	0	Syntaxin-like	protein
FadA	PF09403.10	gi|284161569|ref|YP_003400192.1|	-	0.78	10.3	17.8	0.16	12.5	6.5	3.3	1	1	1	3	3	3	0	Adhesion	protein	FadA
BLOC1_2	PF10046.9	gi|284161569|ref|YP_003400192.1|	-	1.1	9.6	12.4	1.2	9.5	9.5	2.5	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
APG6_N	PF17675.1	gi|284161569|ref|YP_003400192.1|	-	2.1	8.8	13.3	3.7	8.1	13.3	1.5	1	1	0	1	1	1	0	Apg6	coiled-coil	region
DUF1664	PF07889.12	gi|284161569|ref|YP_003400192.1|	-	3.9	7.5	8.3	0.91	9.6	2.8	2.2	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF1664)
Med21	PF11221.8	gi|284161569|ref|YP_003400192.1|	-	4.2	7.6	12.0	4.3	7.6	9.8	1.9	2	0	0	2	2	2	0	Subunit	21	of	Mediator	complex
TF_Zn_Ribbon	PF08271.12	gi|284161570|ref|YP_003400193.1|	-	1.5e-05	24.4	0.6	3.3e-05	23.3	0.6	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Prim_Zn_Ribbon	PF08273.12	gi|284161570|ref|YP_003400193.1|	-	0.0027	18.0	0.5	0.0055	17.0	0.5	1.5	1	0	0	1	1	1	1	Zinc-binding	domain	of	primase-helicase
zinc_ribbon_5	PF13719.6	gi|284161570|ref|YP_003400193.1|	-	0.0041	16.9	0.2	0.0086	15.8	0.2	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161570|ref|YP_003400193.1|	-	0.011	15.6	0.3	0.029	14.3	0.3	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161570|ref|YP_003400193.1|	-	0.03	14.3	0.4	0.072	13.1	0.4	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Auto_anti-p27	PF06677.12	gi|284161570|ref|YP_003400193.1|	-	0.037	14.2	0.4	1.7	8.8	0.4	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_10	PF10058.9	gi|284161570|ref|YP_003400193.1|	-	0.16	11.7	2.9	4.4	7.1	3.6	2.3	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
PHD	PF00628.29	gi|284161570|ref|YP_003400193.1|	-	0.25	11.3	2.3	0.81	9.6	2.5	1.8	1	1	0	1	1	1	0	PHD-finger
DUF3725	PF12523.8	gi|284161570|ref|YP_003400193.1|	-	0.34	11.2	2.5	2.1	8.7	0.1	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3725)
DUF1610	PF07754.11	gi|284161570|ref|YP_003400193.1|	-	0.58	10.2	4.2	2.7	8.0	0.5	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
POTRA_2	PF08479.11	gi|284161572|ref|YP_003400195.1|	-	0.1	12.5	0.1	1	9.3	0.0	2.1	2	0	0	2	2	2	0	POTRA	domain,	ShlB-type
HTH_24	PF13412.6	gi|284161574|ref|YP_003400197.1|	-	1.7e-08	33.9	0.1	2.4e-08	33.4	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|284161574|ref|YP_003400197.1|	-	1.4e-07	31.4	0.0	2.1e-07	30.7	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_29	PF13551.6	gi|284161574|ref|YP_003400197.1|	-	2.1e-07	30.8	0.0	2.5e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Crp_2	PF13545.6	gi|284161574|ref|YP_003400197.1|	-	4.9e-07	29.6	0.0	7.4e-07	29.1	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.7	gi|284161574|ref|YP_003400197.1|	-	7.6e-07	28.9	0.0	9.2e-07	28.7	0.0	1.1	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.20	gi|284161574|ref|YP_003400197.1|	-	2.7e-06	27.2	0.2	3.7e-06	26.7	0.2	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|284161574|ref|YP_003400197.1|	-	2.8e-06	27.3	0.0	3.3e-06	27.1	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|284161574|ref|YP_003400197.1|	-	7.7e-06	25.5	0.0	1.1e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
TrmB	PF01978.19	gi|284161574|ref|YP_003400197.1|	-	3.6e-05	23.6	0.0	5.1e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.6	gi|284161574|ref|YP_003400197.1|	-	6.7e-05	22.9	0.0	9e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|284161574|ref|YP_003400197.1|	-	0.0001	22.4	0.0	0.00025	21.2	0.0	1.6	1	1	1	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.6	gi|284161574|ref|YP_003400197.1|	-	0.00023	21.6	0.0	0.0003	21.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|284161574|ref|YP_003400197.1|	-	0.00032	20.6	0.0	0.00038	20.4	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
Crp	PF00325.20	gi|284161574|ref|YP_003400197.1|	-	0.00043	19.9	0.1	0.0069	16.0	0.0	2.4	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	crp	family
HTH_36	PF13730.6	gi|284161574|ref|YP_003400197.1|	-	0.00052	19.9	0.0	0.00092	19.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|284161574|ref|YP_003400197.1|	-	0.00089	19.6	0.0	0.0012	19.1	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
DprA_WH	PF17782.1	gi|284161574|ref|YP_003400197.1|	-	0.0011	19.0	0.0	0.0014	18.7	0.0	1.1	1	0	0	1	1	1	1	DprA	winged	helix	domain
HTH_IclR	PF09339.10	gi|284161574|ref|YP_003400197.1|	-	0.0019	18.0	0.0	0.0026	17.5	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HxlR	PF01638.17	gi|284161574|ref|YP_003400197.1|	-	0.0021	17.9	0.0	0.0022	17.8	0.0	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
TFA2_Winged_2	PF18121.1	gi|284161574|ref|YP_003400197.1|	-	0.0024	17.5	0.1	0.003	17.2	0.1	1.4	1	1	0	1	1	1	1	TFA2	Winged	helix	domain	2
HTH_1	PF00126.27	gi|284161574|ref|YP_003400197.1|	-	0.0026	17.7	0.0	0.0036	17.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
GntR	PF00392.21	gi|284161574|ref|YP_003400197.1|	-	0.0027	17.3	0.0	0.0043	16.7	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
DUF1495	PF07381.11	gi|284161574|ref|YP_003400197.1|	-	0.0071	16.2	0.1	0.12	12.2	0.1	2.0	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_11	PF08279.12	gi|284161574|ref|YP_003400197.1|	-	0.0071	16.3	0.0	0.011	15.7	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
DUF2250	PF10007.9	gi|284161574|ref|YP_003400197.1|	-	0.0096	16.0	0.0	0.011	15.8	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Sigma70_r4	PF04545.16	gi|284161574|ref|YP_003400197.1|	-	0.015	14.8	0.0	0.039	13.5	0.0	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
Ribosomal_S25	PF03297.15	gi|284161574|ref|YP_003400197.1|	-	0.017	15.3	0.0	0.023	14.9	0.0	1.2	1	0	0	1	1	1	0	S25	ribosomal	protein
TFIIE_alpha	PF02002.17	gi|284161574|ref|YP_003400197.1|	-	0.017	15.0	0.0	0.02	14.8	0.0	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
LexA_DNA_bind	PF01726.16	gi|284161574|ref|YP_003400197.1|	-	0.026	14.3	0.0	0.043	13.6	0.0	1.3	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Replic_Relax	PF13814.6	gi|284161574|ref|YP_003400197.1|	-	0.056	13.5	0.0	0.07	13.2	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
RPA_C	PF08784.11	gi|284161574|ref|YP_003400197.1|	-	0.059	14.0	0.0	0.12	13.0	0.0	1.4	2	0	0	2	2	1	0	Replication	protein	A	C	terminal
Sigma70_r4_2	PF08281.12	gi|284161574|ref|YP_003400197.1|	-	0.086	12.5	0.0	0.28	10.9	0.0	1.8	1	1	0	1	1	1	0	Sigma-70,	region	4
HTH_34	PF13601.6	gi|284161574|ref|YP_003400197.1|	-	0.11	12.7	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.6	gi|284161574|ref|YP_003400197.1|	-	0.12	12.1	0.0	0.14	11.8	0.0	1.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
RepL	PF05732.11	gi|284161574|ref|YP_003400197.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.4	2	0	0	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
Phage_rep_org_N	PF09681.10	gi|284161574|ref|YP_003400197.1|	-	0.14	12.1	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_41	PF14502.6	gi|284161574|ref|YP_003400197.1|	-	0.16	11.7	0.0	0.25	11.1	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
PDDEXK_4	PF14281.6	gi|284161575|ref|YP_003400198.1|	-	0.069	13.3	0.1	0.14	12.3	0.1	1.5	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
T2SSS_2	PF16549.5	gi|284161575|ref|YP_003400198.1|	-	0.089	12.8	0.0	0.22	11.5	0.0	1.6	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS)	pilotin,	S	protein
Podovirus_Gp16	PF05894.12	gi|284161576|ref|YP_003400199.1|	-	0.0012	18.4	0.4	0.0039	16.7	0.4	1.7	1	1	0	1	1	1	1	Podovirus	DNA	encapsidation	protein	(Gp16)
ACPS	PF01648.20	gi|284161576|ref|YP_003400199.1|	-	0.062	13.4	0.2	2.7	8.2	0.1	2.2	2	0	0	2	2	2	0	4'-phosphopantetheinyl	transferase	superfamily
UDG	PF03167.19	gi|284161576|ref|YP_003400199.1|	-	0.11	12.5	0.0	0.2	11.7	0.0	1.6	1	1	0	1	1	1	0	Uracil	DNA	glycosylase	superfamily
DUF3977	PF13122.6	gi|284161576|ref|YP_003400199.1|	-	0.16	12.2	0.7	8.7	6.7	0.0	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3977)
Phage_integr_3	PF16795.5	gi|284161577|ref|YP_003400200.1|	-	1.1e-61	207.5	0.6	2.1e-61	206.5	0.6	1.5	1	0	0	1	1	1	1	Archaeal	phage	integrase
MMPL	PF03176.15	gi|284161578|ref|YP_003400201.1|	-	4.8e-48	163.8	28.1	2.2e-25	89.3	6.4	2.2	2	0	0	2	2	2	2	MMPL	family
Patched	PF02460.18	gi|284161578|ref|YP_003400201.1|	-	1.9e-13	49.4	40.0	8.2e-07	27.5	16.5	4.0	3	1	1	4	4	4	4	Patched	family
Sterol-sensing	PF12349.8	gi|284161578|ref|YP_003400201.1|	-	5.3e-07	29.6	20.3	0.00086	19.2	3.5	3.0	2	0	0	2	2	2	2	Sterol-sensing	domain	of	SREBP	cleavage-activation
Nore1-SARAH	PF16517.5	gi|284161578|ref|YP_003400201.1|	-	0.89	9.5	0.0	0.89	9.5	0.0	3.3	4	0	0	4	4	4	0	Novel	Ras	effector	1	C-terminal	SARAH	(Sav/Rassf/Hpo)	domain
NPCBM_assoc	PF10633.9	gi|284161579|ref|YP_003400202.1|	-	3.9e-13	49.5	3.7	0.023	14.9	0.0	5.2	5	0	0	5	5	5	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.11	gi|284161579|ref|YP_003400202.1|	-	2.6e-09	37.3	2.6	0.00074	19.7	0.0	5.2	6	0	0	6	6	6	3	CARDB
DUF11	PF01345.18	gi|284161579|ref|YP_003400202.1|	-	7.7e-06	26.1	0.1	2.6	8.4	0.0	5.3	4	2	1	5	5	5	2	Domain	of	unknown	function	DUF11
PHTB1_C	PF14728.6	gi|284161579|ref|YP_003400202.1|	-	0.011	14.9	0.0	0.38	9.8	0.0	2.1	2	0	0	2	2	2	0	PTHB1	C-terminus
DUF2393	PF09624.10	gi|284161579|ref|YP_003400202.1|	-	0.011	15.7	0.3	0.14	12.2	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2393)
Y_Y_Y	PF07495.13	gi|284161579|ref|YP_003400202.1|	-	1.2	9.1	7.2	5.3	7.1	0.1	4.7	6	0	0	6	6	6	0	Y_Y_Y	domain
TrmB	PF01978.19	gi|284161580|ref|YP_003400203.1|	-	3e-19	68.7	0.6	6.4e-19	67.6	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284161580|ref|YP_003400203.1|	-	1.4e-05	24.8	0.0	2.8e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|284161580|ref|YP_003400203.1|	-	5e-05	23.0	0.1	0.00024	20.9	0.0	2.3	2	2	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161580|ref|YP_003400203.1|	-	8.5e-05	22.0	0.0	0.00024	20.6	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|284161580|ref|YP_003400203.1|	-	0.00069	19.5	0.0	0.0034	17.3	0.0	2.1	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.20	gi|284161580|ref|YP_003400203.1|	-	0.00081	19.7	0.0	0.0018	18.6	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_28	PF13518.6	gi|284161580|ref|YP_003400203.1|	-	0.0015	18.6	0.0	0.0033	17.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|284161580|ref|YP_003400203.1|	-	0.0021	17.9	0.0	0.0061	16.4	0.0	1.8	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.22	gi|284161580|ref|YP_003400203.1|	-	0.0028	17.6	0.0	0.0059	16.5	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|284161580|ref|YP_003400203.1|	-	0.0038	17.3	0.1	0.015	15.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_17	PF12728.7	gi|284161580|ref|YP_003400203.1|	-	0.0047	17.1	0.1	0.078	13.2	0.0	2.6	3	0	0	3	3	3	1	Helix-turn-helix	domain
UPF0122	PF04297.14	gi|284161580|ref|YP_003400203.1|	-	0.019	15.2	0.1	2.5	8.4	0.0	2.6	3	0	0	3	3	3	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_9	PF08221.11	gi|284161580|ref|YP_003400203.1|	-	0.028	14.5	0.0	0.1	12.7	0.0	1.9	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_29	PF13551.6	gi|284161580|ref|YP_003400203.1|	-	0.035	14.1	0.0	0.058	13.4	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_11	PF08279.12	gi|284161580|ref|YP_003400203.1|	-	0.042	13.8	0.0	0.094	12.7	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GntR	PF00392.21	gi|284161580|ref|YP_003400203.1|	-	0.054	13.2	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_CodY	PF08222.11	gi|284161580|ref|YP_003400203.1|	-	0.057	13.0	0.0	0.13	11.8	0.0	1.6	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Penicillinase_R	PF03965.16	gi|284161580|ref|YP_003400203.1|	-	0.086	13.2	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_23	PF13384.6	gi|284161580|ref|YP_003400203.1|	-	0.1	12.4	0.0	0.3	10.9	0.0	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
QueC	PF06508.13	gi|284161581|ref|YP_003400204.1|	-	2.9e-63	213.2	0.0	3.3e-63	213.0	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|284161581|ref|YP_003400204.1|	-	0.00032	20.5	0.0	0.0012	18.7	0.0	1.8	2	0	0	2	2	2	1	PP-loop	family
Arginosuc_synth	PF00764.19	gi|284161581|ref|YP_003400204.1|	-	0.027	13.8	0.1	0.11	11.8	0.0	2.0	2	1	1	3	3	3	0	Arginosuccinate	synthase
ThiI	PF02568.14	gi|284161581|ref|YP_003400204.1|	-	0.04	13.5	0.0	0.48	10.0	0.0	2.1	2	0	0	2	2	2	0	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.21	gi|284161581|ref|YP_003400204.1|	-	0.12	12.0	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
Thioredoxin_14	PF18402.1	gi|284161581|ref|YP_003400204.1|	-	0.17	11.8	0.0	14	5.6	0.0	2.2	1	1	1	2	2	2	0	Thioredoxin-like	domain
TatD_DNase	PF01026.21	gi|284161582|ref|YP_003400205.1|	-	2.7e-25	89.2	0.1	3.2e-25	89.0	0.1	1.0	1	0	0	1	1	1	1	TatD	related	DNase
AP_endonuc_2	PF01261.24	gi|284161582|ref|YP_003400205.1|	-	6.1e-06	25.8	0.0	1.4e-05	24.7	0.1	1.5	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
SCAB_CC	PF16712.5	gi|284161582|ref|YP_003400205.1|	-	0.006	16.4	0.6	0.011	15.6	0.6	1.6	1	1	0	1	1	1	1	Coiled-coil	regions	of	plant-specific	actin-binding	protein
Amidohydro_1	PF01979.20	gi|284161582|ref|YP_003400205.1|	-	0.043	13.1	0.5	0.098	11.9	0.2	1.8	1	1	0	1	1	1	0	Amidohydrolase	family
Peptidase_M19	PF01244.21	gi|284161582|ref|YP_003400205.1|	-	0.044	13.0	0.0	0.14	11.2	0.0	1.7	2	0	0	2	2	2	0	Membrane	dipeptidase	(Peptidase	family	M19)
Hydrolase_3	PF08282.12	gi|284161582|ref|YP_003400205.1|	-	0.06	13.1	0.1	0.41	10.3	0.0	2.3	2	1	1	3	3	3	0	haloacid	dehalogenase-like	hydrolase
Chorismate_synt	PF01264.21	gi|284161583|ref|YP_003400206.1|	-	1.4e-146	487.3	0.0	1.7e-146	487.1	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
DUF5486	PF17588.2	gi|284161583|ref|YP_003400206.1|	-	0.17	11.8	0.1	0.45	10.4	0.1	1.7	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5486)
TruD	PF01142.18	gi|284161584|ref|YP_003400207.1|	-	2.3e-138	461.5	0.3	2.6e-138	461.3	0.3	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
DUF3053	PF11254.8	gi|284161584|ref|YP_003400207.1|	-	0.18	11.3	0.0	0.29	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3053)
DUF5611	PF18446.1	gi|284161585|ref|YP_003400208.1|	-	3.9e-32	111.2	4.1	4.4e-32	111.0	4.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5611)
DUF5093	PF17011.5	gi|284161585|ref|YP_003400208.1|	-	0.036	14.4	0.8	0.045	14.0	0.8	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5093)
PAC2	PF09754.9	gi|284161586|ref|YP_003400209.1|	-	8.3e-47	159.9	0.0	9.4e-47	159.8	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
DUF473	PF04322.12	gi|284161587|ref|YP_003400210.1|	-	1.6e-43	147.3	1.1	1.9e-43	147.1	1.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF473)
DUF5402	PF17393.2	gi|284161587|ref|YP_003400210.1|	-	0.066	13.2	0.1	0.14	12.1	0.0	1.5	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5402)
RHH_6	PF16762.5	gi|284161588|ref|YP_003400211.1|	-	6.9e-05	23.4	0.0	6.9e-05	23.4	0.0	1.0	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_3	PF12651.7	gi|284161588|ref|YP_003400211.1|	-	0.1	12.6	0.3	0.2	11.7	0.1	1.5	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161589|ref|YP_003400212.1|	-	2.1e-21	75.6	0.0	4.5e-21	74.5	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284161589|ref|YP_003400212.1|	-	2.1e-06	27.9	3.0	2.1e-06	27.9	3.0	2.0	2	0	0	2	2	2	1	Probable	transposase
zf_Rg	PF17915.1	gi|284161589|ref|YP_003400212.1|	-	0.014	14.7	0.4	0.03	13.7	0.4	1.5	1	0	0	1	1	1	0	Reverse	gyrase	zinc	finger
Methyltransf_13	PF08421.11	gi|284161589|ref|YP_003400212.1|	-	0.11	12.8	0.4	0.67	10.2	0.2	2.1	2	0	0	2	2	2	0	Putative	zinc	binding	domain
Prok-RING_1	PF14446.6	gi|284161589|ref|YP_003400212.1|	-	0.2	11.6	0.5	0.34	10.9	0.5	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
PNPase	PF03726.14	gi|284161589|ref|YP_003400212.1|	-	0.61	10.6	5.6	0.34	11.5	3.0	2.0	2	0	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DMRL_synthase	PF00885.19	gi|284161591|ref|YP_003400214.1|	-	2.5e-14	53.3	0.0	2.9e-14	53.1	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
SpoU_sub_bind	PF08032.12	gi|284161591|ref|YP_003400214.1|	-	0.019	15.3	0.5	0.09	13.1	0.5	2.0	1	1	0	1	1	1	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
Aminotran_5	PF00266.19	gi|284161592|ref|YP_003400215.1|	-	6.3e-39	134.0	0.0	7.6e-39	133.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|284161592|ref|YP_003400215.1|	-	3.8e-05	23.0	0.0	6.4e-05	22.3	0.0	1.3	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|284161592|ref|YP_003400215.1|	-	0.0006	19.2	0.0	0.0009	18.6	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_3	PF00202.21	gi|284161592|ref|YP_003400215.1|	-	0.0018	17.0	0.1	0.34	9.5	0.0	2.3	2	1	0	2	2	2	2	Aminotransferase	class-III
FAD_binding_2	PF00890.24	gi|284161592|ref|YP_003400215.1|	-	0.041	12.9	0.0	0.12	11.4	0.0	1.7	2	0	0	2	2	2	0	FAD	binding	domain
Met_10	PF02475.16	gi|284161594|ref|YP_003400217.1|	-	5.9e-73	244.9	1.1	8.4e-73	244.4	1.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltr_RsmB-F	PF01189.17	gi|284161594|ref|YP_003400217.1|	-	1.2e-07	31.6	0.0	4e-05	23.4	0.0	2.7	2	1	1	3	3	3	1	16S	rRNA	methyltransferase	RsmB/F
MTS	PF05175.14	gi|284161594|ref|YP_003400217.1|	-	4.2e-07	29.7	0.0	8.7e-07	28.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|284161594|ref|YP_003400217.1|	-	1.8e-06	27.6	0.0	6.8e-06	25.7	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|284161594|ref|YP_003400217.1|	-	2.2e-06	27.5	0.0	4.1e-06	26.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|284161594|ref|YP_003400217.1|	-	2.3e-06	27.4	0.0	3.6e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.6	gi|284161594|ref|YP_003400217.1|	-	2.8e-06	28.0	0.0	6e-06	26.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
TRM	PF02005.16	gi|284161594|ref|YP_003400217.1|	-	1.3e-05	24.5	0.0	1.6e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PCMT	PF01135.19	gi|284161594|ref|YP_003400217.1|	-	0.00051	19.9	0.0	0.00093	19.0	0.0	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
UPF0020	PF01170.18	gi|284161594|ref|YP_003400217.1|	-	0.00087	19.0	0.0	0.0015	18.3	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_15	PF09445.10	gi|284161594|ref|YP_003400217.1|	-	0.00094	18.8	0.0	0.0058	16.2	0.0	2.0	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_11	PF08241.12	gi|284161594|ref|YP_003400217.1|	-	0.002	18.7	0.0	0.0054	17.4	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|284161594|ref|YP_003400217.1|	-	0.0046	18.0	0.0	0.0089	17.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PRMT5	PF05185.16	gi|284161594|ref|YP_003400217.1|	-	0.0081	16.0	0.0	0.013	15.4	0.0	1.3	1	0	0	1	1	1	1	PRMT5	arginine-N-methyltransferase
RTC	PF01137.21	gi|284161595|ref|YP_003400218.1|	-	2.5e-79	265.6	0.0	3.3e-79	265.2	0.0	1.1	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.13	gi|284161595|ref|YP_003400218.1|	-	2.5e-15	56.8	0.1	5.1e-15	55.9	0.1	1.5	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
Mo-co_dimer	PF03404.16	gi|284161595|ref|YP_003400218.1|	-	0.11	12.5	0.0	0.36	10.8	0.0	2.0	1	1	0	1	1	1	0	Mo-co	oxidoreductase	dimerisation	domain
DUF2072	PF09845.9	gi|284161596|ref|YP_003400219.1|	-	1.2e-28	100.0	4.9	2.4e-15	57.0	0.0	2.0	1	1	1	2	2	2	2	Zn-ribbon	containing	protein
AnfO_nitrog	PF09582.10	gi|284161596|ref|YP_003400219.1|	-	0.081	12.3	0.1	0.34	10.2	0.1	1.9	1	1	0	1	1	1	0	Iron	only	nitrogenase	protein	AnfO	(AnfO_nitrog)
DUF2073	PF09846.9	gi|284161597|ref|YP_003400220.1|	-	1.1e-41	140.9	1.1	1.3e-41	140.7	1.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2073)
MMR_HSR1	PF01926.23	gi|284161598|ref|YP_003400221.1|	-	4.3e-15	55.8	0.0	5.6e-15	55.4	0.0	1.1	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.27	gi|284161598|ref|YP_003400221.1|	-	1.2e-12	47.7	0.1	3.9e-06	26.5	0.0	3.1	2	2	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Arf	PF00025.21	gi|284161598|ref|YP_003400221.1|	-	8.5e-06	25.3	0.0	0.023	14.1	0.0	2.3	2	0	0	2	2	2	2	ADP-ribosylation	factor	family
RsgA_GTPase	PF03193.16	gi|284161598|ref|YP_003400221.1|	-	0.00028	20.8	0.0	0.37	10.7	0.0	2.2	2	0	0	2	2	2	2	RsgA	GTPase
FeoB_N	PF02421.18	gi|284161598|ref|YP_003400221.1|	-	0.00029	20.4	0.2	0.0014	18.2	0.2	2.0	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
SRPRB	PF09439.10	gi|284161598|ref|YP_003400221.1|	-	0.00041	19.8	0.0	0.3	10.5	0.0	2.4	1	1	1	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
Roc	PF08477.13	gi|284161598|ref|YP_003400221.1|	-	0.00061	20.0	0.0	0.082	13.1	0.0	2.1	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_24	PF13479.6	gi|284161598|ref|YP_003400221.1|	-	0.0014	18.4	0.1	0.0024	17.6	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|284161598|ref|YP_003400221.1|	-	0.0016	18.9	0.0	0.0038	17.7	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Septin	PF00735.18	gi|284161598|ref|YP_003400221.1|	-	0.0024	17.2	0.0	0.0033	16.8	0.0	1.2	1	0	0	1	1	1	1	Septin
MMR_HSR1_Xtn	PF16897.5	gi|284161598|ref|YP_003400221.1|	-	0.0033	17.4	0.0	0.0051	16.8	0.0	1.3	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
AAA_18	PF13238.6	gi|284161598|ref|YP_003400221.1|	-	0.013	16.0	0.1	0.05	14.1	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
Ras	PF00071.22	gi|284161598|ref|YP_003400221.1|	-	0.02	14.5	0.0	5.8	6.5	0.0	2.6	2	1	0	2	2	2	0	Ras	family
ATPase_2	PF01637.18	gi|284161598|ref|YP_003400221.1|	-	0.046	13.6	0.1	0.061	13.2	0.1	1.5	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
MMR_HSR1_C	PF08438.10	gi|284161598|ref|YP_003400221.1|	-	0.16	12.5	0.0	0.31	11.6	0.0	1.4	1	0	0	1	1	1	0	GTPase	of	unknown	function	C-terminal
Parvo_NS1	PF01057.17	gi|284161598|ref|YP_003400221.1|	-	0.19	10.8	0.0	0.29	10.2	0.0	1.2	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
NB-ARC	PF00931.22	gi|284161598|ref|YP_003400221.1|	-	0.2	10.8	0.0	0.31	10.2	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
RNA_helicase	PF00910.22	gi|284161598|ref|YP_003400221.1|	-	0.2	12.0	0.0	0.34	11.3	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
Fer4	PF00037.27	gi|284161599|ref|YP_003400222.1|	-	1.2e-19	69.3	19.9	1.2e-10	40.7	6.3	2.0	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161599|ref|YP_003400222.1|	-	2e-17	62.4	19.9	1.7e-09	37.4	5.1	2.0	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161599|ref|YP_003400222.1|	-	1.7e-13	50.9	22.8	1e-09	38.8	11.6	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161599|ref|YP_003400222.1|	-	3.6e-13	48.7	16.9	1.5e-06	27.9	4.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284161599|ref|YP_003400222.1|	-	5.9e-12	45.6	23.1	1.6e-08	34.5	12.2	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161599|ref|YP_003400222.1|	-	1.4e-10	41.9	9.1	1.5e-05	25.9	1.2	2.0	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|284161599|ref|YP_003400222.1|	-	2.7e-10	40.2	12.5	4.6e-10	39.4	12.6	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161599|ref|YP_003400222.1|	-	3.9e-08	33.3	13.4	6.8e-08	32.5	13.4	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284161599|ref|YP_003400222.1|	-	1.8e-07	31.6	16.8	0.0017	19.2	4.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|284161599|ref|YP_003400222.1|	-	4.3e-07	30.0	15.8	0.0012	19.2	4.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|284161599|ref|YP_003400222.1|	-	2.5e-05	24.9	21.3	0.0011	19.7	6.1	2.9	1	1	2	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|284161599|ref|YP_003400222.1|	-	5.8e-05	23.6	10.9	0.0089	16.5	1.8	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284161599|ref|YP_003400222.1|	-	0.00087	19.7	12.0	0.13	12.7	3.1	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284161599|ref|YP_003400222.1|	-	0.0021	18.9	7.2	0.13	13.1	1.8	2.0	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284161599|ref|YP_003400222.1|	-	0.023	15.2	20.5	0.46	11.1	6.0	2.4	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284161599|ref|YP_003400222.1|	-	0.081	13.1	13.6	0.36	11.0	13.6	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_19	PF06902.11	gi|284161599|ref|YP_003400222.1|	-	1.9	8.6	8.8	2.5	8.2	1.3	2.6	1	1	1	2	2	2	0	Divergent	4Fe-4S	mono-cluster
Adenylsucc_synt	PF00709.21	gi|284161600|ref|YP_003400223.1|	-	2.8e-86	290.0	2.7	1e-39	136.7	0.1	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
CytochromB561_N	PF09786.9	gi|284161600|ref|YP_003400223.1|	-	0.049	12.6	0.0	0.32	9.9	0.0	1.8	1	1	1	2	2	2	0	Cytochrome	B561,	N	terminal
ARD	PF03079.14	gi|284161601|ref|YP_003400224.1|	-	0.094	12.9	0.5	0.17	12.0	0.5	1.5	1	0	0	1	1	1	0	ARD/ARD'	family
Csm1	PF12539.8	gi|284161601|ref|YP_003400224.1|	-	0.1	13.2	0.2	1.1	9.9	0.1	2.2	2	0	0	2	2	2	0	Chromosome	segregation	protein	Csm1/Pcs1
Ribosomal_L29	PF00831.23	gi|284161601|ref|YP_003400224.1|	-	3.3	7.8	8.6	0.93	9.5	1.8	3.0	3	0	0	3	3	3	0	Ribosomal	L29	protein
Methyltr_RsmB-F	PF01189.17	gi|284161602|ref|YP_003400225.1|	-	1.7e-60	204.1	0.0	2.2e-60	203.7	0.0	1.1	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|284161602|ref|YP_003400225.1|	-	1.2e-08	35.3	0.0	2.7e-08	34.2	0.0	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
FtsJ	PF01728.19	gi|284161602|ref|YP_003400225.1|	-	1.5e-05	25.2	0.0	1.7e-05	25.0	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|284161602|ref|YP_003400225.1|	-	0.00027	20.8	0.0	0.00048	20.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|284161602|ref|YP_003400225.1|	-	0.00043	19.8	0.7	0.02	14.4	0.2	2.5	3	0	0	3	3	3	1	Putative	methyltransferase
POR	PF01558.18	gi|284161602|ref|YP_003400225.1|	-	0.14	12.2	0.0	0.28	11.3	0.0	1.4	1	0	0	1	1	1	0	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Radical_SAM	PF04055.21	gi|284161603|ref|YP_003400226.1|	-	8.9e-20	71.7	0.1	1.1e-18	68.2	0.0	2.6	2	1	0	3	3	3	1	Radical	SAM	superfamily
IF2_N	PF04760.15	gi|284161603|ref|YP_003400226.1|	-	0.019	14.8	0.2	0.082	12.7	0.0	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Arnt_C	PF18583.1	gi|284161603|ref|YP_003400226.1|	-	0.033	13.8	0.0	2.9	7.6	0.0	2.4	2	0	0	2	2	2	0	Aminoarabinose	transferase	C-terminal	domain
Orthopox_B11R	PF07033.11	gi|284161603|ref|YP_003400226.1|	-	0.51	10.2	3.2	32	4.4	0.1	3.5	3	0	0	3	3	3	0	Orthopoxvirus	B11R	protein
LEA_2	PF03168.13	gi|284161604|ref|YP_003400227.1|	-	6.9e-17	61.8	0.0	1e-09	38.8	0.0	2.3	2	0	0	2	2	2	2	Late	embryogenesis	abundant	protein
DUF1356	PF07092.12	gi|284161604|ref|YP_003400227.1|	-	0.018	14.3	1.3	0.34	10.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1356)
YukC	PF10140.9	gi|284161604|ref|YP_003400227.1|	-	0.099	11.5	0.0	0.15	10.9	0.0	1.2	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukC
DUF123	PF01986.16	gi|284161605|ref|YP_003400228.1|	-	3.3e-25	88.4	0.1	4e-25	88.1	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
eRF1_2	PF03464.15	gi|284161606|ref|YP_003400229.1|	-	2e-47	160.8	0.0	3.5e-47	160.1	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|284161606|ref|YP_003400229.1|	-	5.1e-35	120.4	2.6	3e-34	117.9	1.9	2.6	2	1	0	2	2	2	1	eRF1	domain	3
baeRF_family10	PF18854.1	gi|284161606|ref|YP_003400229.1|	-	1.8e-15	57.4	0.2	3e-14	53.5	0.0	2.6	3	0	0	3	3	3	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
acVLRF1	PF18859.1	gi|284161606|ref|YP_003400229.1|	-	8.1e-15	55.3	0.0	1.8e-14	54.1	0.0	1.6	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
eRF1_1	PF03463.15	gi|284161606|ref|YP_003400229.1|	-	3.5e-11	43.2	0.1	8.2e-11	42.0	0.0	1.7	2	0	0	2	2	2	1	eRF1	domain	1
Zn-ribbon_8	PF09723.10	gi|284161606|ref|YP_003400229.1|	-	0.002	18.2	6.5	0.062	13.4	3.0	2.6	2	0	0	2	2	2	1	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|284161606|ref|YP_003400229.1|	-	0.057	12.9	5.0	0.13	11.8	5.0	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
Lar_restr_allev	PF14354.6	gi|284161606|ref|YP_003400229.1|	-	0.068	13.6	0.7	0.13	12.7	0.7	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
MerB	PF03243.15	gi|284161606|ref|YP_003400229.1|	-	0.068	13.3	0.0	0.11	12.6	0.0	1.3	1	0	0	1	1	1	0	Alkylmercury	lyase
Desulfoferrod_N	PF06397.12	gi|284161606|ref|YP_003400229.1|	-	0.086	12.5	3.8	0.2	11.3	3.8	1.6	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
zf-ribbon_3	PF13248.6	gi|284161606|ref|YP_003400229.1|	-	0.12	11.9	0.1	0.21	11.0	0.1	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|284161606|ref|YP_003400229.1|	-	0.13	11.8	0.2	0.29	10.8	0.2	1.6	1	0	0	1	1	1	0	Ubiquitin-Binding	Zinc	Finger
zinc_ribbon_2	PF13240.6	gi|284161606|ref|YP_003400229.1|	-	0.13	12.0	0.7	0.24	11.1	0.2	1.7	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4379	PF14311.6	gi|284161606|ref|YP_003400229.1|	-	0.16	12.3	0.8	0.34	11.3	0.8	1.4	1	0	0	1	1	1	0	Probable	Zinc-ribbon	domain
zf-TFIIB	PF13453.6	gi|284161606|ref|YP_003400229.1|	-	0.25	10.7	2.8	8.9	5.7	0.2	2.5	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.11	gi|284161606|ref|YP_003400229.1|	-	0.29	11.1	2.1	0.85	9.6	2.1	1.8	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Prenyltransf	PF01255.19	gi|284161607|ref|YP_003400230.1|	-	6.4e-71	238.4	0.1	7.7e-71	238.2	0.1	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
RNA_pol_Rpb1_6	PF04992.14	gi|284161607|ref|YP_003400230.1|	-	0.0048	16.8	0.7	0.0062	16.4	0.7	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	6
DUF2551	PF10826.8	gi|284161608|ref|YP_003400231.1|	-	2.7e-29	101.2	1.3	3.1e-29	101.0	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2551)
Arg_repressor	PF01316.21	gi|284161608|ref|YP_003400231.1|	-	0.00018	21.2	0.1	0.00032	20.4	0.1	1.5	1	1	0	1	1	1	1	Arginine	repressor,	DNA	binding	domain
FUR	PF01475.19	gi|284161608|ref|YP_003400231.1|	-	0.031	14.4	0.1	0.04	14.1	0.1	1.1	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
Penicillinase_R	PF03965.16	gi|284161608|ref|YP_003400231.1|	-	0.066	13.6	0.1	0.092	13.1	0.1	1.2	1	0	0	1	1	1	0	Penicillinase	repressor
RNA_pol_Rpb1_4	PF05000.17	gi|284161608|ref|YP_003400231.1|	-	0.08	12.9	0.0	0.085	12.8	0.0	1.4	1	1	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	4
Fer4_12	PF13353.6	gi|284161609|ref|YP_003400232.1|	-	3.2e-08	33.9	0.1	6.8e-08	32.9	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|284161609|ref|YP_003400232.1|	-	3.4e-08	34.1	0.2	9.1e-08	32.7	0.1	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284161609|ref|YP_003400232.1|	-	7.1e-07	29.4	0.2	2e-06	27.9	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DNA_primase_lrg	PF04104.14	gi|284161609|ref|YP_003400232.1|	-	0.028	13.8	0.0	0.051	13.0	0.0	1.4	1	0	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Pkip-1	PF06878.11	gi|284161609|ref|YP_003400232.1|	-	0.08	13.0	0.3	0.16	12.1	0.3	1.4	1	0	0	1	1	1	0	Pkip-1	protein
zf-P11	PF03854.14	gi|284161609|ref|YP_003400232.1|	-	3.7	7.3	5.9	2	8.1	0.2	2.3	2	0	0	2	2	2	0	P-11	zinc	finger
Ribosomal_L7Ae	PF01248.26	gi|284161610|ref|YP_003400233.1|	-	3.2e-30	103.7	0.9	3.7e-30	103.5	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.6	gi|284161610|ref|YP_003400233.1|	-	0.00013	21.7	0.0	0.00018	21.3	0.0	1.3	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
RNase_P_pop3	PF08228.11	gi|284161610|ref|YP_003400233.1|	-	0.00082	19.5	0.0	0.00098	19.2	0.0	1.0	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
Ribosomal_S28e	PF01200.18	gi|284161611|ref|YP_003400234.1|	-	3.7e-32	110.1	1.0	4.1e-32	110.0	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Ribosomal_L24e	PF01246.20	gi|284161612|ref|YP_003400235.1|	-	6.3e-25	87.2	2.3	7.2e-25	87.0	2.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.14	gi|284161612|ref|YP_003400235.1|	-	0.00015	21.6	1.1	0.00021	21.1	1.1	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
YHS	PF04945.13	gi|284161612|ref|YP_003400235.1|	-	0.00016	21.7	0.2	0.00025	21.1	0.2	1.2	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.10	gi|284161612|ref|YP_003400235.1|	-	0.0042	17.4	1.4	0.0075	16.6	1.4	1.5	1	1	0	1	1	1	1	Archaeal	TRASH	domain
DUF3268	PF11672.8	gi|284161612|ref|YP_003400235.1|	-	0.015	15.6	0.2	0.015	15.6	0.2	1.1	1	0	0	1	1	1	0	zinc-finger-containing	domain
PD40	PF07676.12	gi|284161612|ref|YP_003400235.1|	-	0.096	12.7	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	WD40-like	Beta	Propeller	Repeat
DUF2116	PF09889.9	gi|284161612|ref|YP_003400235.1|	-	0.1	12.6	1.1	1.6	8.8	0.2	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
A2L_zn_ribbon	PF08792.10	gi|284161612|ref|YP_003400235.1|	-	0.51	10.1	4.1	4.1	7.2	0.3	2.4	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
Thiamine_BP	PF01910.17	gi|284161613|ref|YP_003400236.1|	-	7.7e-23	80.2	0.3	8.6e-23	80.1	0.3	1.0	1	0	0	1	1	1	1	Thiamine-binding	protein
Glutaredoxin	PF00462.24	gi|284161613|ref|YP_003400236.1|	-	0.04	14.1	0.1	0.14	12.4	0.0	1.9	1	1	0	1	1	1	0	Glutaredoxin
Glyco_tran_WbsX	PF14307.6	gi|284161613|ref|YP_003400236.1|	-	0.091	12.2	0.0	0.1	12.0	0.0	1.0	1	0	0	1	1	1	0	Glycosyltransferase	WbsX
ParcG	PF10274.9	gi|284161613|ref|YP_003400236.1|	-	0.093	12.9	0.0	0.16	12.1	0.0	1.5	1	1	1	2	2	2	0	Parkin	co-regulated	protein
Radical_SAM	PF04055.21	gi|284161613|ref|YP_003400236.1|	-	0.11	12.9	0.0	0.12	12.7	0.0	1.1	1	0	0	1	1	1	0	Radical	SAM	superfamily
NDK	PF00334.19	gi|284161614|ref|YP_003400237.1|	-	3.5e-63	211.6	0.0	3.9e-63	211.4	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GTP_EFTU	PF00009.27	gi|284161615|ref|YP_003400238.1|	-	4.1e-29	101.5	0.0	2.9e-25	88.9	0.0	2.5	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.6	gi|284161615|ref|YP_003400238.1|	-	5.6e-29	99.9	1.1	2.7e-28	97.7	1.1	2.3	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
Intein_splicing	PF14890.6	gi|284161615|ref|YP_003400238.1|	-	2.1e-25	89.2	0.0	6.7e-24	84.3	0.0	3.3	2	2	0	3	3	3	1	Intein	splicing	domain
IF-2	PF11987.8	gi|284161615|ref|YP_003400238.1|	-	4.8e-21	74.9	3.6	5.8e-21	74.6	1.8	2.2	2	0	0	2	2	2	1	Translation-initiation	factor	2
LAGLIDADG_3	PF14528.6	gi|284161615|ref|YP_003400238.1|	-	1.9e-17	63.3	0.5	1.9e-17	63.3	0.5	3.8	5	0	0	5	5	5	1	LAGLIDADG-like	domain
GTP_EFTU_D2	PF03144.25	gi|284161615|ref|YP_003400238.1|	-	1.7e-11	44.3	8.4	4.6e-09	36.5	0.5	3.0	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|284161615|ref|YP_003400238.1|	-	0.00053	20.0	0.1	0.0019	18.3	0.1	2.0	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
ATP_bind_1	PF03029.17	gi|284161615|ref|YP_003400238.1|	-	0.018	14.8	0.0	0.043	13.6	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
LAGLIDADG_WhiA	PF14527.6	gi|284161615|ref|YP_003400238.1|	-	0.019	15.0	0.6	3.5	7.8	0.0	3.1	2	0	0	2	2	2	0	WhiA	LAGLIDADG-like	domain
PT-HINT	PF07591.11	gi|284161615|ref|YP_003400238.1|	-	0.023	14.9	0.0	0.11	12.7	0.0	2.2	1	0	0	1	1	1	0	Pretoxin	HINT	domain
LAGLIDADG_1	PF00961.19	gi|284161615|ref|YP_003400238.1|	-	0.93	10.5	5.7	4.2	8.4	1.5	3.9	2	1	1	3	3	3	0	LAGLIDADG	endonuclease
Gly-zipper_Omp	PF13488.6	gi|284161616|ref|YP_003400239.1|	-	0.42	10.7	5.0	7.1	6.7	0.3	2.3	2	0	0	2	2	2	0	Glycine	zipper
DUF3169	PF11368.8	gi|284161616|ref|YP_003400239.1|	-	0.51	9.8	13.2	1.1	8.7	0.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3169)
DUF5056	PF16479.5	gi|284161616|ref|YP_003400239.1|	-	5	7.4	8.4	4.8	7.5	2.6	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5056)
Aminotran_1_2	PF00155.21	gi|284161617|ref|YP_003400240.1|	-	4.8e-63	213.5	0.0	5.5e-63	213.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.13	gi|284161617|ref|YP_003400240.1|	-	0.0053	15.7	0.1	0.0084	15.0	0.1	1.4	1	1	0	1	1	1	1	Allinase
AsnC_trans_reg	PF01037.21	gi|284161618|ref|YP_003400241.1|	-	3.2e-17	62.3	0.2	6.2e-17	61.3	0.2	1.4	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|284161618|ref|YP_003400241.1|	-	5.4e-14	51.5	0.3	1.4e-13	50.2	0.2	1.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|284161618|ref|YP_003400241.1|	-	2.7e-09	36.7	0.1	1.1e-08	34.8	0.0	2.0	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_29	PF13551.6	gi|284161618|ref|YP_003400241.1|	-	4.1e-07	29.9	0.0	1e-06	28.6	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Crp_2	PF13545.6	gi|284161618|ref|YP_003400241.1|	-	5.3e-07	29.5	0.0	1.2e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|284161618|ref|YP_003400241.1|	-	8.5e-07	28.8	0.6	1.9e-06	27.7	0.1	1.8	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.7	gi|284161618|ref|YP_003400241.1|	-	3.4e-06	26.8	0.0	7.3e-06	25.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_23	PF13384.6	gi|284161618|ref|YP_003400241.1|	-	6.7e-06	25.8	0.0	3.8e-05	23.4	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
DUF1670	PF07900.11	gi|284161618|ref|YP_003400241.1|	-	6.2e-05	22.5	0.1	7.6e-05	22.2	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1670)
HTH_28	PF13518.6	gi|284161618|ref|YP_003400241.1|	-	0.00012	22.1	0.0	0.00033	20.7	0.0	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
Crp	PF00325.20	gi|284161618|ref|YP_003400241.1|	-	0.00071	19.2	0.0	0.0018	17.9	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	crp	family
HTH_IclR	PF09339.10	gi|284161618|ref|YP_003400241.1|	-	0.0047	16.7	0.0	0.0076	16.0	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Phage_rep_O	PF04492.13	gi|284161618|ref|YP_003400241.1|	-	0.0055	17.3	0.0	0.012	16.2	0.0	1.5	1	1	0	1	1	1	1	Bacteriophage	replication	protein	O
HTH_20	PF12840.7	gi|284161618|ref|YP_003400241.1|	-	0.009	16.1	0.0	0.015	15.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|284161618|ref|YP_003400241.1|	-	0.0093	15.8	0.1	0.016	15.1	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|284161618|ref|YP_003400241.1|	-	0.012	15.6	0.2	0.02	14.8	0.2	1.4	1	0	0	1	1	1	0	HTH	domain
TFIIE_alpha	PF02002.17	gi|284161618|ref|YP_003400241.1|	-	0.015	15.1	1.4	0.024	14.5	1.4	1.3	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_Tnp_ISL3	PF13542.6	gi|284161618|ref|YP_003400241.1|	-	0.015	14.7	0.0	0.056	12.9	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_5	PF01022.20	gi|284161618|ref|YP_003400241.1|	-	0.02	14.8	0.1	0.03	14.2	0.1	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.20	gi|284161618|ref|YP_003400241.1|	-	0.021	15.2	0.1	0.071	13.5	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
Sigma70_r3	PF04539.16	gi|284161618|ref|YP_003400241.1|	-	0.022	14.8	0.1	0.046	13.8	0.1	1.5	1	0	0	1	1	1	0	Sigma-70	region	3
Sigma70_r4	PF04545.16	gi|284161618|ref|YP_003400241.1|	-	0.024	14.2	0.1	0.14	11.7	0.1	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
Sigma70_r4_2	PF08281.12	gi|284161618|ref|YP_003400241.1|	-	0.044	13.5	0.0	2.1	8.1	0.0	2.7	3	0	0	3	3	2	0	Sigma-70,	region	4
HTH_Mga	PF08280.11	gi|284161618|ref|YP_003400241.1|	-	0.055	13.5	0.2	0.15	12.1	0.1	1.8	2	0	0	2	2	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Terminase_5	PF06056.12	gi|284161618|ref|YP_003400241.1|	-	0.065	13.1	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_36	PF13730.6	gi|284161618|ref|YP_003400241.1|	-	0.079	12.9	0.0	0.72	9.8	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2250	PF10007.9	gi|284161618|ref|YP_003400241.1|	-	0.11	12.7	0.1	0.19	11.9	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Phage_CII	PF05269.11	gi|284161618|ref|YP_003400241.1|	-	0.11	12.8	0.1	0.16	12.2	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	CII	protein
HTH_27	PF13463.6	gi|284161618|ref|YP_003400241.1|	-	0.13	12.7	0.3	1.3	9.6	0.1	2.3	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
HHH_5	PF14520.6	gi|284161618|ref|YP_003400241.1|	-	0.18	12.4	1.4	1.5	9.5	0.2	2.6	3	1	0	3	3	3	0	Helix-hairpin-helix	domain
DUF5013	PF16405.5	gi|284161618|ref|YP_003400241.1|	-	0.23	11.8	0.0	0.4	11.0	0.0	1.4	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF5013)
GatB_N	PF02934.15	gi|284161619|ref|YP_003400242.1|	-	6.1e-104	347.2	0.0	8.7e-104	346.7	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|284161619|ref|YP_003400242.1|	-	1.5e-43	148.2	0.0	2.6e-43	147.4	0.0	1.4	1	0	0	1	1	1	1	GatB	domain
Cation_efflux	PF01545.21	gi|284161620|ref|YP_003400243.1|	-	1.1e-34	120.0	10.0	1.3e-34	119.7	10.0	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|284161620|ref|YP_003400243.1|	-	9.6e-20	70.5	2.9	1.5e-19	69.8	2.9	1.3	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
DUF3382	PF11862.8	gi|284161620|ref|YP_003400243.1|	-	0.025	14.8	0.4	0.054	13.8	0.4	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3382)
Glycophorin_A	PF01102.18	gi|284161620|ref|YP_003400243.1|	-	0.031	14.5	0.4	0.28	11.4	0.1	2.6	3	0	0	3	3	3	0	Glycophorin	A
TCR_zetazeta	PF11628.8	gi|284161620|ref|YP_003400243.1|	-	0.28	10.9	0.2	0.28	10.9	0.2	2.5	2	0	0	2	2	2	0	T-cell	surface	glycoprotein	CD3	zeta	chain
MnhB	PF04039.13	gi|284161620|ref|YP_003400243.1|	-	2.2	8.6	8.3	16	5.8	3.1	2.7	1	1	2	3	3	3	0	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
Rep_fac_C	PF08542.11	gi|284161621|ref|YP_003400244.1|	-	1.1e-23	83.4	0.1	4.2e-23	81.5	0.1	2.1	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
Intein_splicing	PF14890.6	gi|284161621|ref|YP_003400244.1|	-	1.8e-18	66.7	0.5	4e-18	65.7	0.5	1.6	1	0	0	1	1	1	1	Intein	splicing	domain
DNA_pol3_delta2	PF13177.6	gi|284161621|ref|YP_003400244.1|	-	3.6e-15	56.1	0.0	9.9e-10	38.4	0.0	2.8	2	1	0	2	2	2	2	DNA	polymerase	III,	delta	subunit
AAA	PF00004.29	gi|284161621|ref|YP_003400244.1|	-	8.6e-14	52.1	0.1	5.7e-06	26.8	0.0	3.4	3	1	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|284161621|ref|YP_003400244.1|	-	1.2e-06	28.3	0.1	2e-05	24.4	0.0	2.7	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_assoc_2	PF16193.5	gi|284161621|ref|YP_003400244.1|	-	2.8e-06	27.6	0.1	9.1e-06	25.9	0.1	2.0	1	0	0	1	1	1	1	AAA	C-terminal	domain
DNA_pol3_delta	PF06144.13	gi|284161621|ref|YP_003400244.1|	-	6.7e-06	26.0	0.1	5.2e-05	23.1	0.0	2.5	3	0	0	3	3	2	1	DNA	polymerase	III,	delta	subunit
ResIII	PF04851.15	gi|284161621|ref|YP_003400244.1|	-	9.5e-06	25.7	0.0	2.9e-05	24.1	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.6	gi|284161621|ref|YP_003400244.1|	-	1.5e-05	25.4	0.0	0.014	15.8	0.0	2.9	3	0	0	3	3	3	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|284161621|ref|YP_003400244.1|	-	2.7e-05	24.2	0.0	7.5e-05	22.7	0.0	1.8	1	0	0	1	1	1	1	Rad17	P-loop	domain
Hom_end	PF05204.14	gi|284161621|ref|YP_003400244.1|	-	0.00033	20.8	0.0	0.0095	16.1	0.0	2.5	2	0	0	2	2	2	1	Homing	endonuclease
TIP49	PF06068.13	gi|284161621|ref|YP_003400244.1|	-	0.00034	19.9	0.0	0.00079	18.7	0.0	1.5	1	0	0	1	1	1	1	TIP49	P-loop	domain
LAGLIDADG_3	PF14528.6	gi|284161621|ref|YP_003400244.1|	-	0.00085	19.6	2.3	0.0023	18.2	0.5	2.6	2	1	0	2	2	2	1	LAGLIDADG-like	domain
AAA_22	PF13401.6	gi|284161621|ref|YP_003400244.1|	-	0.0012	19.1	0.0	2.1	8.6	0.0	3.4	3	1	1	4	4	4	1	AAA	domain
AAA_7	PF12775.7	gi|284161621|ref|YP_003400244.1|	-	0.0012	18.4	0.0	0.003	17.1	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|284161621|ref|YP_003400244.1|	-	0.0024	17.3	0.0	0.089	12.2	0.0	2.5	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|284161621|ref|YP_003400244.1|	-	0.006	16.6	0.0	0.76	9.8	0.0	3.2	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|284161621|ref|YP_003400244.1|	-	0.0063	16.3	0.0	0.028	14.2	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Sigma54_activat	PF00158.26	gi|284161621|ref|YP_003400244.1|	-	0.008	15.9	0.0	0.67	9.6	0.0	2.5	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|284161621|ref|YP_003400244.1|	-	0.015	15.9	0.1	0.09	13.3	0.0	2.4	3	0	0	3	3	1	0	AAA	domain
AAA_11	PF13086.6	gi|284161621|ref|YP_003400244.1|	-	0.036	13.8	0.0	0.084	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|284161621|ref|YP_003400244.1|	-	0.043	13.3	0.0	0.14	11.6	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
DUF3377	PF11857.8	gi|284161622|ref|YP_003400245.1|	-	0.015	15.3	1.1	0.022	14.7	1.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3377)
OrfB_Zn_ribbon	PF07282.11	gi|284161623|ref|YP_003400246.1|	-	1.1e-22	79.7	0.4	3.2e-22	78.2	0.4	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284161623|ref|YP_003400246.1|	-	0.00064	19.9	0.2	0.00064	19.9	0.2	2.0	2	0	0	2	2	2	1	Probable	transposase
RPA_interact_C	PF14768.6	gi|284161623|ref|YP_003400246.1|	-	0.019	15.5	0.4	0.045	14.3	0.4	1.7	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
TackOD1	PF18551.1	gi|284161623|ref|YP_003400246.1|	-	0.028	14.1	0.3	0.061	13.0	0.3	1.5	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
TF_Zn_Ribbon	PF08271.12	gi|284161623|ref|YP_003400246.1|	-	0.059	12.9	1.7	0.21	11.2	1.7	1.9	1	0	0	1	1	1	0	TFIIB	zinc-binding
tRNA-synt_2	PF00152.20	gi|284161623|ref|YP_003400246.1|	-	0.12	11.5	0.8	0.18	10.9	0.8	1.3	1	1	0	1	1	1	0	tRNA	synthetases	class	II	(D,	K	and	N)
zf-ribbon_3	PF13248.6	gi|284161623|ref|YP_003400246.1|	-	0.24	10.9	1.2	0.56	9.7	1.2	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
RNase_P_Rpp14	PF01900.19	gi|284161624|ref|YP_003400247.1|	-	9.5e-15	54.7	0.0	1.2e-14	54.4	0.0	1.1	1	0	0	1	1	1	1	Rpp14/Pop5	family
Proteasome	PF00227.26	gi|284161625|ref|YP_003400248.1|	-	1.9e-64	216.7	0.1	2.4e-64	216.4	0.1	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|284161625|ref|YP_003400248.1|	-	2.3e-14	52.7	0.1	4.1e-14	51.9	0.1	1.4	1	0	0	1	1	1	1	Proteasome	subunit	A	N-terminal	signature
UPF0154	PF03672.13	gi|284161625|ref|YP_003400248.1|	-	0.038	14.0	0.2	0.082	13.0	0.2	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0154)
SBDS	PF01172.18	gi|284161626|ref|YP_003400249.1|	-	1.2e-23	83.0	0.6	2.4e-23	82.0	0.4	1.6	2	0	0	2	2	2	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|284161626|ref|YP_003400249.1|	-	2.4e-20	72.7	0.0	4.6e-20	71.8	0.0	1.5	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
S1	PF00575.23	gi|284161627|ref|YP_003400250.1|	-	3.5e-08	33.7	0.1	5.9e-07	29.7	0.0	2.7	3	0	0	3	3	3	1	S1	RNA	binding	domain
KH_1	PF00013.29	gi|284161627|ref|YP_003400250.1|	-	4.5e-07	29.6	1.1	1.2e-06	28.3	1.1	1.6	1	0	0	1	1	1	1	KH	domain
KH_6	PF15985.5	gi|284161627|ref|YP_003400250.1|	-	1.1e-06	28.9	0.5	2.1e-06	28.0	0.5	1.5	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.17	gi|284161627|ref|YP_003400250.1|	-	1.4e-06	28.0	1.7	1.4e-06	28.0	1.7	2.3	2	1	0	2	2	2	1	KH	domain
ECR1_N	PF14382.6	gi|284161627|ref|YP_003400250.1|	-	2.8e-06	27.0	0.0	5.3e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
DUF1676	PF07898.13	gi|284161627|ref|YP_003400250.1|	-	0.14	12.2	0.7	0.21	11.6	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1676)
RNase_PH	PF01138.21	gi|284161628|ref|YP_003400251.1|	-	2.1e-36	125.3	0.0	3e-36	124.8	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|284161628|ref|YP_003400251.1|	-	9.8e-16	57.6	0.2	2.1e-15	56.5	0.2	1.6	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
EF-hand_5	PF13202.6	gi|284161628|ref|YP_003400251.1|	-	0.072	12.6	0.5	0.18	11.4	0.0	2.0	2	0	0	2	2	2	0	EF	hand
RNase_PH	PF01138.21	gi|284161629|ref|YP_003400252.1|	-	1.1e-31	110.1	0.0	1.5e-31	109.6	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|284161629|ref|YP_003400252.1|	-	1.4e-08	34.6	0.1	2.5e-08	33.8	0.1	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
Glycos_transf_1	PF00534.20	gi|284161630|ref|YP_003400253.1|	-	5.9e-25	87.8	0.0	9.6e-25	87.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284161630|ref|YP_003400253.1|	-	3.7e-22	79.2	0.0	5.9e-22	78.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284161630|ref|YP_003400253.1|	-	1.4e-07	31.7	0.2	5.6e-07	29.7	0.1	2.0	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|284161630|ref|YP_003400253.1|	-	0.017	15.5	0.0	0.038	14.4	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284161631|ref|YP_003400254.1|	-	1.4e-33	116.3	0.0	2.8e-33	115.3	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glycos_transf_1	PF00534.20	gi|284161631|ref|YP_003400254.1|	-	1.7e-32	112.4	0.5	3.1e-32	111.5	0.5	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284161631|ref|YP_003400254.1|	-	1.7e-19	70.5	0.0	3.6e-19	69.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|284161631|ref|YP_003400254.1|	-	4.2e-19	69.5	0.0	7.5e-19	68.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.6	gi|284161631|ref|YP_003400254.1|	-	2e-06	27.9	0.1	5.1e-06	26.6	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_5	PF08323.11	gi|284161631|ref|YP_003400254.1|	-	0.011	15.4	0.2	0.097	12.3	0.1	2.2	1	1	1	2	2	2	0	Starch	synthase	catalytic	domain
Glyco_trans_1_2	PF13524.6	gi|284161631|ref|YP_003400254.1|	-	0.16	12.4	0.0	0.4	11.1	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
HEPN	PF05168.14	gi|284161632|ref|YP_003400255.1|	-	9.4e-26	90.3	5.0	1e-25	90.1	5.0	1.0	1	0	0	1	1	1	1	HEPN	domain
ComZ	PF10815.8	gi|284161632|ref|YP_003400255.1|	-	0.0041	17.1	0.7	0.019	14.9	0.7	2.0	1	1	0	1	1	1	1	ComZ
NTP_transf_2	PF01909.23	gi|284161633|ref|YP_003400256.1|	-	1.1e-10	41.7	0.8	1.5e-10	41.2	0.8	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.6	gi|284161633|ref|YP_003400256.1|	-	4.3e-07	30.1	0.0	5.4e-07	29.8	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
Polbeta	PF18765.1	gi|284161633|ref|YP_003400256.1|	-	6.3e-07	29.4	1.9	1.5e-06	28.2	0.8	1.8	1	1	1	2	2	2	1	Polymerase	beta,	Nucleotidyltransferase
DUF294	PF03445.13	gi|284161633|ref|YP_003400256.1|	-	0.0022	17.8	0.0	0.0028	17.5	0.0	1.1	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
S6OS1	PF15676.5	gi|284161633|ref|YP_003400256.1|	-	0.013	14.0	0.5	0.016	13.7	0.5	1.1	1	0	0	1	1	1	0	Six6	opposite	strand	transcript	1	family
Adenyl_cycl_N	PF12633.7	gi|284161633|ref|YP_003400256.1|	-	0.073	13.0	0.0	0.083	12.8	0.0	1.2	1	1	0	1	1	1	0	Adenylate	cyclase	NT	domain
Glycos_transf_1	PF00534.20	gi|284161634|ref|YP_003400257.1|	-	1.5e-25	89.7	0.1	4.5e-25	88.2	0.1	1.8	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284161634|ref|YP_003400257.1|	-	3.6e-25	89.0	0.0	6.8e-25	88.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284161634|ref|YP_003400257.1|	-	1.1e-15	58.1	0.0	1.7e-14	54.2	0.1	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|284161634|ref|YP_003400257.1|	-	1e-06	29.0	0.0	3e-06	27.5	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|284161634|ref|YP_003400257.1|	-	4.4e-05	24.0	0.0	0.00027	21.4	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.20	gi|284161635|ref|YP_003400258.1|	-	1.1e-24	86.8	0.0	2.3e-24	85.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284161635|ref|YP_003400258.1|	-	1.4e-16	61.1	0.0	2.4e-16	60.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|284161635|ref|YP_003400258.1|	-	3.7e-05	24.0	0.0	7.3e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
FF	PF01846.19	gi|284161635|ref|YP_003400258.1|	-	0.37	11.0	3.4	1.7	8.9	0.4	3.0	3	0	0	3	3	3	0	FF	domain
Methyltransf_21	PF05050.12	gi|284161636|ref|YP_003400259.1|	-	2e-16	60.5	0.1	3.4e-16	59.7	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Met_10	PF02475.16	gi|284161636|ref|YP_003400259.1|	-	2.7e-06	27.3	0.1	5.9e-06	26.2	0.1	1.7	2	0	0	2	2	2	1	Met-10+	like-protein
PrmA	PF06325.13	gi|284161636|ref|YP_003400259.1|	-	0.03	13.7	0.0	0.05	13.0	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_22	PF13383.6	gi|284161636|ref|YP_003400259.1|	-	0.031	13.8	0.1	0.047	13.2	0.1	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DUF3793	PF12672.7	gi|284161636|ref|YP_003400259.1|	-	0.063	13.3	0.2	0.94	9.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3793)
MTS	PF05175.14	gi|284161636|ref|YP_003400259.1|	-	0.11	12.0	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|284161636|ref|YP_003400259.1|	-	0.12	13.1	0.0	0.24	12.1	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Sulfotransfer_3	PF13469.6	gi|284161637|ref|YP_003400260.1|	-	0.0005	20.5	0.1	0.48	10.8	0.0	2.3	2	0	0	2	2	2	2	Sulfotransferase	family
Sulfotransfer_1	PF00685.27	gi|284161637|ref|YP_003400260.1|	-	0.0084	15.6	1.5	0.066	12.7	1.5	2.1	1	1	0	1	1	1	1	Sulfotransferase	domain
Pentaxin	PF00354.17	gi|284161638|ref|YP_003400261.1|	-	0.036	13.7	0.0	0.045	13.4	0.0	1.1	1	0	0	1	1	1	0	Pentaxin	family
pXO2-34	PF17362.2	gi|284161638|ref|YP_003400261.1|	-	0.053	13.4	0.3	0.07	13.0	0.3	1.2	1	0	0	1	1	1	0	Family	of	unknown	function
Glycos_transf_2	PF00535.26	gi|284161639|ref|YP_003400262.1|	-	0.04	13.7	0.0	0.052	13.4	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Polysacc_synt	PF01943.17	gi|284161640|ref|YP_003400263.1|	-	7.1e-47	160.1	55.6	9.4e-46	156.4	29.3	2.2	2	0	0	2	2	2	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.6	gi|284161640|ref|YP_003400263.1|	-	1.6e-28	99.8	16.1	1.6e-28	99.8	16.1	2.4	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|284161640|ref|YP_003400263.1|	-	2.5e-20	73.0	50.4	4.7e-17	62.4	17.9	3.4	3	0	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|284161640|ref|YP_003400263.1|	-	8.9e-11	41.0	40.9	2e-10	39.9	29.6	2.2	1	1	1	2	2	2	2	Lipid	II	flippase	MurJ
MatE	PF01554.18	gi|284161640|ref|YP_003400263.1|	-	1.3e-05	24.9	22.0	0.00024	20.8	6.3	4.4	3	2	1	4	4	4	2	MatE
Ribosomal_L37ae	PF01780.19	gi|284161641|ref|YP_003400264.1|	-	2.9e-33	113.8	6.1	3.1e-33	113.7	6.1	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
C1_1	PF00130.22	gi|284161641|ref|YP_003400264.1|	-	0.00087	19.1	1.5	0.0012	18.7	1.5	1.2	1	0	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Rubredoxin_2	PF18073.1	gi|284161641|ref|YP_003400264.1|	-	0.0012	18.5	3.5	0.37	10.6	0.2	2.2	2	0	0	2	2	2	2	Rubredoxin	metal	binding	domain
zf-H2C2_2	PF13465.6	gi|284161641|ref|YP_003400264.1|	-	0.0032	17.8	1.3	0.36	11.3	0.1	2.2	2	0	0	2	2	2	1	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161641|ref|YP_003400264.1|	-	0.0042	17.0	5.2	0.012	15.5	5.5	1.6	1	1	1	2	2	2	2	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161641|ref|YP_003400264.1|	-	0.005	16.7	0.7	0.008	16.1	0.7	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Rep_fac-A_C	PF08646.10	gi|284161641|ref|YP_003400264.1|	-	0.03	14.1	1.8	0.043	13.6	1.8	1.3	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-RING_13	PF17977.1	gi|284161641|ref|YP_003400264.1|	-	0.031	14.4	2.8	0.04	14.1	2.8	1.1	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
zf-CCHC_2	PF13696.6	gi|284161641|ref|YP_003400264.1|	-	0.035	13.9	2.1	0.035	13.9	2.1	2.3	2	0	0	2	2	2	0	Zinc	knuckle
zf-IS66	PF13005.7	gi|284161641|ref|YP_003400264.1|	-	0.039	14.4	4.7	0.063	13.7	1.0	2.2	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Zn-ribbon_8	PF09723.10	gi|284161641|ref|YP_003400264.1|	-	0.068	13.3	5.4	0.51	10.5	0.2	2.4	3	0	0	3	3	2	0	Zinc	ribbon	domain
C1_2	PF03107.16	gi|284161641|ref|YP_003400264.1|	-	0.17	12.2	4.1	0.81	10.1	4.2	1.8	1	1	0	1	1	1	0	C1	domain
zf-BED	PF02892.15	gi|284161641|ref|YP_003400264.1|	-	0.18	11.8	7.5	0.78	9.8	1.2	2.1	1	1	1	2	2	2	0	BED	zinc	finger
zf-ACC	PF17848.1	gi|284161641|ref|YP_003400264.1|	-	0.22	11.6	0.2	0.22	11.6	0.2	2.5	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
DUF4428	PF14471.6	gi|284161641|ref|YP_003400264.1|	-	0.23	11.4	5.0	0.47	10.4	0.5	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4428)
HalOD2	PF18547.1	gi|284161641|ref|YP_003400264.1|	-	0.97	9.4	6.3	3.6	7.6	6.4	1.8	1	1	1	2	2	2	0	Halobacterial	output	domain	2
zf_UBZ	PF18439.1	gi|284161641|ref|YP_003400264.1|	-	1.6	8.4	5.1	0.91	9.2	0.9	2.3	2	1	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
DNA_RNApol_7kD	PF03604.13	gi|284161642|ref|YP_003400265.1|	-	9.1e-09	34.9	2.1	1.2e-08	34.5	2.1	1.2	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf_UBZ	PF18439.1	gi|284161642|ref|YP_003400265.1|	-	0.00066	19.2	0.5	0.14	11.8	0.1	2.1	2	0	0	2	2	2	2	Ubiquitin-Binding	Zinc	Finger
DUF1451	PF07295.11	gi|284161642|ref|YP_003400265.1|	-	0.0013	18.8	0.2	0.0014	18.6	0.2	1.1	1	0	0	1	1	1	1	Zinc-ribbon	containing	domain
Zn-ribbon_8	PF09723.10	gi|284161642|ref|YP_003400265.1|	-	0.0021	18.1	0.1	0.0031	17.6	0.1	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|284161642|ref|YP_003400265.1|	-	0.0031	17.4	0.7	0.012	15.5	0.6	1.8	1	1	1	2	2	2	2	SprT-like	zinc	ribbon	domain
Prok-RING_1	PF14446.6	gi|284161642|ref|YP_003400265.1|	-	0.006	16.5	1.6	0.0073	16.2	1.6	1.1	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
zf-ribbon_3	PF13248.6	gi|284161642|ref|YP_003400265.1|	-	0.0068	15.8	0.3	0.17	11.4	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|284161642|ref|YP_003400265.1|	-	0.0081	15.9	1.3	0.01	15.5	1.3	1.2	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|284161642|ref|YP_003400265.1|	-	0.011	15.5	1.0	0.86	9.4	0.3	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.19	gi|284161642|ref|YP_003400265.1|	-	0.016	15.2	0.1	0.019	15.0	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Cys_rich_CPXG	PF14255.6	gi|284161642|ref|YP_003400265.1|	-	0.028	14.3	0.9	3.3	7.7	0.1	2.1	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
OrfB_Zn_ribbon	PF07282.11	gi|284161642|ref|YP_003400265.1|	-	0.03	14.2	0.1	0.041	13.8	0.1	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
TFIIS_C	PF01096.18	gi|284161642|ref|YP_003400265.1|	-	0.035	14.0	0.9	0.93	9.4	0.1	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DZR	PF12773.7	gi|284161642|ref|YP_003400265.1|	-	0.035	14.1	0.4	0.09	12.8	0.4	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-dskA_traR	PF01258.17	gi|284161642|ref|YP_003400265.1|	-	0.039	13.9	3.3	1.9	8.5	4.2	2.1	1	1	1	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
PHD	PF00628.29	gi|284161642|ref|YP_003400265.1|	-	0.048	13.6	0.7	0.056	13.3	0.7	1.1	1	0	0	1	1	1	0	PHD-finger
DUF4428	PF14471.6	gi|284161642|ref|YP_003400265.1|	-	0.057	13.3	0.1	0.059	13.3	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
RecR	PF02132.15	gi|284161642|ref|YP_003400265.1|	-	0.14	11.7	2.5	0.17	11.5	0.2	2.0	2	0	0	2	2	2	0	RecR	protein
YhfH	PF14149.6	gi|284161642|ref|YP_003400265.1|	-	0.19	11.7	1.8	4.9	7.2	0.1	2.1	2	0	0	2	2	2	0	YhfH-like	protein
Desulfoferrod_N	PF06397.12	gi|284161642|ref|YP_003400265.1|	-	0.22	11.2	5.9	0.58	9.8	1.1	2.1	1	1	1	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
TF_Zn_Ribbon	PF08271.12	gi|284161642|ref|YP_003400265.1|	-	1.7	8.2	8.1	4	7.0	0.7	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
DMRL_synthase	PF00885.19	gi|284161643|ref|YP_003400266.1|	-	5.8e-36	123.4	0.6	6.6e-36	123.2	0.6	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Metallophos_3	PF14582.6	gi|284161643|ref|YP_003400266.1|	-	0.094	12.0	1.4	0.34	10.2	0.2	2.3	1	1	1	3	3	3	0	Metallophosphoesterase,	calcineurin	superfamily
Aminotran_1_2	PF00155.21	gi|284161644|ref|YP_003400267.1|	-	8.6e-73	245.6	0.0	9.9e-73	245.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|284161644|ref|YP_003400267.1|	-	3.3e-06	26.7	0.0	5.9e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|284161644|ref|YP_003400267.1|	-	1.1e-05	24.6	0.0	2.4e-05	23.5	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|284161644|ref|YP_003400267.1|	-	2.1e-05	23.2	0.0	3.4e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|284161644|ref|YP_003400267.1|	-	0.00026	20.4	0.0	0.00044	19.6	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Alliinase_C	PF04864.13	gi|284161644|ref|YP_003400267.1|	-	0.00056	18.9	0.1	0.042	12.7	0.0	2.6	3	1	0	3	3	3	1	Allinase
OKR_DC_1	PF01276.20	gi|284161644|ref|YP_003400267.1|	-	0.019	13.7	0.0	0.035	12.8	0.0	1.5	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
Radical_SAM	PF04055.21	gi|284161644|ref|YP_003400267.1|	-	0.052	13.9	0.2	1.6	9.1	0.0	2.8	2	1	1	3	3	3	0	Radical	SAM	superfamily
Rsbr_N	PF08678.10	gi|284161644|ref|YP_003400267.1|	-	0.075	13.1	0.3	4.6	7.3	0.0	2.9	3	0	0	3	3	3	0	Rsbr	N	terminal
ATPase	PF06745.13	gi|284161645|ref|YP_003400268.1|	-	7.2e-09	35.3	0.2	1.2e-08	34.6	0.2	1.3	1	1	0	1	1	1	1	KaiC
DUF835	PF05763.12	gi|284161645|ref|YP_003400268.1|	-	0.00041	20.1	0.2	0.0012	18.6	0.2	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
Viral_helicase1	PF01443.18	gi|284161645|ref|YP_003400268.1|	-	0.00042	20.1	0.0	0.00064	19.5	0.0	1.3	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.12	gi|284161645|ref|YP_003400268.1|	-	0.0016	18.4	0.1	0.0071	16.3	0.0	2.0	2	0	0	2	2	2	1	NACHT	domain
DUF2075	PF09848.9	gi|284161645|ref|YP_003400268.1|	-	0.0024	17.2	0.0	0.0038	16.5	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
NB-ARC	PF00931.22	gi|284161645|ref|YP_003400268.1|	-	0.0051	16.0	2.1	0.015	14.5	2.1	1.9	1	1	0	1	1	1	1	NB-ARC	domain
AAA_19	PF13245.6	gi|284161645|ref|YP_003400268.1|	-	0.011	16.1	0.1	0.019	15.3	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|284161645|ref|YP_003400268.1|	-	0.013	15.9	0.1	0.022	15.2	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|284161645|ref|YP_003400268.1|	-	0.019	15.2	0.0	0.025	14.8	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.19	gi|284161645|ref|YP_003400268.1|	-	0.019	14.6	0.0	0.033	13.8	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.23	gi|284161645|ref|YP_003400268.1|	-	0.025	14.7	0.2	0.039	14.0	0.2	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.12	gi|284161645|ref|YP_003400268.1|	-	0.033	13.5	0.0	0.055	12.7	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_16	PF13191.6	gi|284161645|ref|YP_003400268.1|	-	0.035	14.5	0.0	0.054	13.9	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
KAP_NTPase	PF07693.14	gi|284161645|ref|YP_003400268.1|	-	0.044	13.0	0.0	0.057	12.7	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
AAA_14	PF13173.6	gi|284161645|ref|YP_003400268.1|	-	0.083	12.9	0.0	0.16	12.0	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|284161645|ref|YP_003400268.1|	-	0.086	12.7	0.3	0.35	10.8	0.1	2.0	1	1	1	2	2	2	0	NTPase
RuvB_N	PF05496.12	gi|284161645|ref|YP_003400268.1|	-	0.087	12.6	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_33	PF13671.6	gi|284161645|ref|YP_003400268.1|	-	0.088	13.0	0.0	0.13	12.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|284161645|ref|YP_003400268.1|	-	0.088	13.2	0.0	0.79	10.1	0.0	2.1	2	0	0	2	2	2	0	RNA	helicase
AAA_18	PF13238.6	gi|284161645|ref|YP_003400268.1|	-	0.093	13.3	0.2	0.22	12.0	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|284161645|ref|YP_003400268.1|	-	0.17	12.3	0.0	0.55	10.7	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
MarC	PF01914.17	gi|284161646|ref|YP_003400269.1|	-	1.3e-59	201.0	10.3	1.5e-59	200.8	10.3	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
TerC	PF03741.16	gi|284161646|ref|YP_003400269.1|	-	0.00035	20.3	8.6	0.0076	15.9	8.4	2.2	1	1	0	1	1	1	1	Integral	membrane	protein	TerC	family
DUF2162	PF09930.9	gi|284161646|ref|YP_003400269.1|	-	0.0014	18.1	4.1	0.0022	17.5	4.1	1.2	1	0	0	1	1	1	1	Predicted	transporter	(DUF2162)
Fumerase	PF05681.14	gi|284161647|ref|YP_003400270.1|	-	1.9e-95	319.3	0.0	2.2e-95	319.2	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Fumerase_C	PF05683.12	gi|284161648|ref|YP_003400271.1|	-	3.9e-46	157.0	0.0	4.7e-46	156.7	0.0	1.1	1	0	0	1	1	1	1	Fumarase	C-terminus
Macro	PF01661.21	gi|284161649|ref|YP_003400272.1|	-	1.8e-31	108.7	0.1	2.3e-31	108.3	0.1	1.2	1	0	0	1	1	1	1	Macro	domain
PadR	PF03551.14	gi|284161650|ref|YP_003400273.1|	-	5.6e-14	51.9	0.4	1.1e-13	50.9	0.1	1.7	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
Penicillinase_R	PF03965.16	gi|284161650|ref|YP_003400273.1|	-	7.8e-05	23.0	0.0	0.00027	21.3	0.0	1.9	1	1	1	2	2	2	1	Penicillinase	repressor
RTP	PF02334.16	gi|284161650|ref|YP_003400273.1|	-	0.0014	19.2	1.7	0.011	16.4	0.3	2.5	1	1	0	2	2	2	1	Replication	terminator	protein
FUR	PF01475.19	gi|284161650|ref|YP_003400273.1|	-	0.0018	18.4	0.1	0.14	12.3	0.0	2.8	1	1	1	3	3	3	1	Ferric	uptake	regulator	family
TrmB	PF01978.19	gi|284161650|ref|YP_003400273.1|	-	0.0029	17.5	0.8	0.025	14.5	0.1	2.6	3	1	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4364	PF14277.6	gi|284161650|ref|YP_003400273.1|	-	0.0033	17.2	0.3	0.005	16.6	0.3	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Replic_Relax	PF13814.6	gi|284161650|ref|YP_003400273.1|	-	0.0037	17.4	0.0	0.0043	17.1	0.0	1.3	1	0	0	1	1	1	1	Replication-relaxation
UvrA_inter	PF17760.1	gi|284161650|ref|YP_003400273.1|	-	0.01	15.9	0.2	0.021	14.9	0.2	1.5	1	1	0	1	1	1	0	UvrA	interaction	domain
HTH_27	PF13463.6	gi|284161650|ref|YP_003400273.1|	-	0.021	15.3	0.2	0.066	13.7	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|284161650|ref|YP_003400273.1|	-	0.044	13.8	1.1	0.1	12.6	0.1	2.1	3	0	0	3	3	3	0	Winged	helix-turn-helix
HEPN_AbiA_CTD	PF18732.1	gi|284161650|ref|YP_003400273.1|	-	0.071	13.0	0.1	0.21	11.5	0.1	1.8	1	1	1	2	2	2	0	HEPN	like,	Abia	C-terminal	domain
NPCBM_assoc	PF10633.9	gi|284161651|ref|YP_003400274.1|	-	1.4e-10	41.3	0.0	0.016	15.4	0.0	5.4	6	0	0	6	6	6	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.11	gi|284161651|ref|YP_003400274.1|	-	6.3e-05	23.2	0.7	7.1	7.0	0.0	4.5	4	0	0	4	4	4	3	CARDB
MFS_1	PF07690.16	gi|284161652|ref|YP_003400275.1|	-	5.8e-55	186.6	35.1	5.8e-55	186.6	35.1	1.5	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|284161652|ref|YP_003400275.1|	-	1.2e-06	27.2	16.6	0.00017	20.1	9.7	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
Sugar_tr	PF00083.24	gi|284161652|ref|YP_003400275.1|	-	2.4e-05	23.4	24.0	5.4e-05	22.3	11.9	2.2	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
PUCC	PF03209.15	gi|284161652|ref|YP_003400275.1|	-	7.3e-05	21.9	16.8	0.0001	21.4	0.1	3.4	2	1	1	3	3	3	2	PUCC	protein
TRI12	PF06609.13	gi|284161652|ref|YP_003400275.1|	-	0.00011	20.8	14.3	0.0002	19.9	14.2	1.4	1	1	0	1	1	1	1	Fungal	trichothecene	efflux	pump	(TRI12)
OATP	PF03137.20	gi|284161652|ref|YP_003400275.1|	-	0.24	9.7	14.6	0.17	10.1	0.1	3.1	2	1	0	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Response_reg	PF00072.24	gi|284161653|ref|YP_003400276.1|	-	1.6e-25	89.5	1.6	1.8e-25	89.3	1.6	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
3HCDH_RFF	PF18321.1	gi|284161653|ref|YP_003400276.1|	-	0.14	12.6	0.0	0.25	11.8	0.0	1.4	1	0	0	1	1	1	0	3-hydroxybutyryl-CoA	dehydrogenase	reduced	Rossmann-fold	domain
HATPase_c	PF02518.26	gi|284161654|ref|YP_003400277.1|	-	7.7e-19	68.3	0.1	1.9e-18	67.0	0.0	1.6	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.7	gi|284161654|ref|YP_003400277.1|	-	2.4e-14	53.5	0.1	6.4e-14	52.1	0.0	1.8	2	0	0	2	2	2	1	PAS	domain
PAS	PF00989.25	gi|284161654|ref|YP_003400277.1|	-	6.6e-14	51.9	0.0	2.9e-13	49.8	0.0	2.1	3	0	0	3	3	3	1	PAS	fold
PAS_3	PF08447.12	gi|284161654|ref|YP_003400277.1|	-	3.5e-10	40.0	0.0	1.8e-09	37.8	0.0	2.1	2	0	0	2	2	2	1	PAS	fold
PAS_4	PF08448.10	gi|284161654|ref|YP_003400277.1|	-	1.2e-09	38.4	0.0	4.8e-09	36.4	0.0	1.9	2	0	0	2	2	2	1	PAS	fold
HATPase_c_2	PF13581.6	gi|284161654|ref|YP_003400277.1|	-	1.5e-06	28.1	0.1	3.2e-06	27.1	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
PAS_8	PF13188.7	gi|284161654|ref|YP_003400277.1|	-	3.1e-05	23.9	0.0	8.4e-05	22.5	0.0	1.7	1	0	0	1	1	1	1	PAS	domain
HATPase_c_5	PF14501.6	gi|284161654|ref|YP_003400277.1|	-	0.0018	18.1	0.0	0.0034	17.3	0.0	1.5	1	0	0	1	1	1	1	GHKL	domain
Rota_NS35	PF02509.14	gi|284161654|ref|YP_003400277.1|	-	0.029	13.4	1.4	0.093	11.7	0.8	1.9	2	0	0	2	2	2	0	Rotavirus	non-structural	protein	35
HisKA	PF00512.25	gi|284161654|ref|YP_003400277.1|	-	0.056	13.5	0.2	0.11	12.5	0.2	1.5	1	0	0	1	1	1	0	His	Kinase	A	(phospho-acceptor)	domain
ATPase	PF06745.13	gi|284161655|ref|YP_003400278.1|	-	2.8e-83	278.8	3.0	1.8e-41	142.0	0.0	2.1	2	0	0	2	2	2	2	KaiC
AAA_25	PF13481.6	gi|284161655|ref|YP_003400278.1|	-	4.1e-17	62.4	0.0	4.6e-10	39.4	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
DnaB_C	PF03796.15	gi|284161655|ref|YP_003400278.1|	-	3.7e-13	49.4	0.3	1.1e-07	31.5	0.5	2.9	2	1	0	2	2	2	2	DnaB-like	helicase	C	terminal	domain
Rad51	PF08423.11	gi|284161655|ref|YP_003400278.1|	-	3.1e-12	46.3	0.4	6.9e-08	32.1	0.1	2.6	2	0	0	2	2	2	2	Rad51
AAA_16	PF13191.6	gi|284161655|ref|YP_003400278.1|	-	2.4e-10	41.1	0.1	3e-07	31.0	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|284161655|ref|YP_003400278.1|	-	2.9e-10	40.3	0.1	0.00056	20.0	0.0	3.7	2	2	0	3	3	2	2	AAA	domain
GvpD	PF07088.11	gi|284161655|ref|YP_003400278.1|	-	4.8e-10	38.7	3.7	2.8e-06	26.2	0.2	3.9	1	1	1	2	2	2	2	GvpD	gas	vesicle	protein
RecA	PF00154.21	gi|284161655|ref|YP_003400278.1|	-	2.2e-09	37.2	0.2	0.00089	18.8	0.1	2.4	2	0	0	2	2	2	2	recA	bacterial	DNA	recombination	protein
AAA_22	PF13401.6	gi|284161655|ref|YP_003400278.1|	-	2.8e-09	37.4	0.5	1.9e-05	24.9	0.2	3.2	2	1	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|284161655|ref|YP_003400278.1|	-	1.6e-08	34.4	0.1	0.00038	20.2	0.0	2.8	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|284161655|ref|YP_003400278.1|	-	3.7e-08	33.4	0.2	0.00019	21.4	0.1	2.8	2	1	0	2	2	2	2	NACHT	domain
AAA_30	PF13604.6	gi|284161655|ref|YP_003400278.1|	-	4e-08	33.2	0.2	2e-05	24.4	0.2	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|284161655|ref|YP_003400278.1|	-	4.1e-08	33.2	0.0	0.0035	17.1	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
DUF2075	PF09848.9	gi|284161655|ref|YP_003400278.1|	-	4.2e-08	32.8	0.1	0.001	18.4	0.0	2.1	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_19	PF13245.6	gi|284161655|ref|YP_003400278.1|	-	5.6e-08	33.2	0.0	0.01	16.2	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
ATPase_2	PF01637.18	gi|284161655|ref|YP_003400278.1|	-	4e-07	30.2	1.3	0.00011	22.2	0.5	2.5	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
T2SSE	PF00437.20	gi|284161655|ref|YP_003400278.1|	-	4.1e-06	26.0	0.1	0.032	13.3	0.1	2.3	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
AAA	PF00004.29	gi|284161655|ref|YP_003400278.1|	-	6.7e-06	26.6	4.7	0.0031	17.9	0.3	3.9	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|284161655|ref|YP_003400278.1|	-	9.4e-06	26.2	0.0	0.016	15.8	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
ResIII	PF04851.15	gi|284161655|ref|YP_003400278.1|	-	9.8e-06	25.7	0.1	0.013	15.5	0.1	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.18	gi|284161655|ref|YP_003400278.1|	-	3.5e-05	23.7	0.0	0.25	11.0	0.0	2.9	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
CbiA	PF01656.23	gi|284161655|ref|YP_003400278.1|	-	3.5e-05	23.9	0.2	0.01	15.9	0.1	2.7	2	2	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PhoH	PF02562.16	gi|284161655|ref|YP_003400278.1|	-	5.7e-05	22.7	0.2	0.001	18.6	0.2	2.6	3	0	0	3	3	2	1	PhoH-like	protein
ABC_tran	PF00005.27	gi|284161655|ref|YP_003400278.1|	-	8.6e-05	23.1	0.3	0.081	13.4	0.3	2.5	2	1	0	2	2	2	1	ABC	transporter
AAA_28	PF13521.6	gi|284161655|ref|YP_003400278.1|	-	8.9e-05	22.8	0.1	0.037	14.3	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Terminase_6	PF03237.15	gi|284161655|ref|YP_003400278.1|	-	9.8e-05	22.1	0.0	0.0051	16.5	0.0	2.3	2	0	0	2	2	2	1	Terminase-like	family
NTPase_1	PF03266.15	gi|284161655|ref|YP_003400278.1|	-	0.00036	20.5	0.2	1.6	8.6	0.0	3.3	3	1	0	3	3	3	1	NTPase
AAA_29	PF13555.6	gi|284161655|ref|YP_003400278.1|	-	0.00058	19.5	0.3	0.66	9.8	0.1	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
UvrD-helicase	PF00580.21	gi|284161655|ref|YP_003400278.1|	-	0.00067	19.3	2.6	0.37	10.3	0.0	2.5	2	1	1	3	3	3	2	UvrD/REP	helicase	N-terminal	domain
PAXNEB	PF05625.11	gi|284161655|ref|YP_003400278.1|	-	0.00091	18.5	0.0	0.049	12.8	0.0	2.2	2	0	0	2	2	2	1	PAXNEB	protein
cobW	PF02492.19	gi|284161655|ref|YP_003400278.1|	-	0.0011	18.6	0.1	1.2	8.7	0.0	2.5	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|284161655|ref|YP_003400278.1|	-	0.0014	18.6	0.1	0.059	13.4	0.0	2.7	3	0	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|284161655|ref|YP_003400278.1|	-	0.0015	18.7	0.1	0.36	11.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|284161655|ref|YP_003400278.1|	-	0.002	18.0	0.0	2.7	7.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_31	PF13614.6	gi|284161655|ref|YP_003400278.1|	-	0.0022	17.9	0.0	0.017	15.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
CobA_CobO_BtuR	PF02572.15	gi|284161655|ref|YP_003400278.1|	-	0.0027	18.0	0.0	3.2	8.0	0.2	2.6	2	1	0	2	2	2	0	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
SRP54	PF00448.22	gi|284161655|ref|YP_003400278.1|	-	0.0032	17.1	0.1	0.26	10.9	0.1	2.5	2	1	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
RNA_helicase	PF00910.22	gi|284161655|ref|YP_003400278.1|	-	0.0049	17.2	0.0	2.2	8.7	0.0	2.7	3	0	0	3	3	2	1	RNA	helicase
NB-ARC	PF00931.22	gi|284161655|ref|YP_003400278.1|	-	0.0074	15.5	0.1	0.046	12.9	0.0	2.1	2	0	0	2	2	2	1	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|284161655|ref|YP_003400278.1|	-	0.0074	15.6	0.0	4.2	6.6	0.0	2.4	2	0	0	2	2	2	0	Zeta	toxin
ATP_bind_1	PF03029.17	gi|284161655|ref|YP_003400278.1|	-	0.0076	16.1	0.0	1.6	8.5	0.0	2.5	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
TrwB_AAD_bind	PF10412.9	gi|284161655|ref|YP_003400278.1|	-	0.0082	15.1	0.1	4.5	6.1	0.0	2.8	4	0	0	4	4	3	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_23	PF13476.6	gi|284161655|ref|YP_003400278.1|	-	0.0086	16.6	0.6	0.35	11.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|284161655|ref|YP_003400278.1|	-	0.009	15.5	0.1	4	6.9	0.0	2.6	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
TsaE	PF02367.17	gi|284161655|ref|YP_003400278.1|	-	0.0098	15.9	0.7	1.4	8.9	0.1	2.7	3	0	0	3	3	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DEAD	PF00270.29	gi|284161655|ref|YP_003400278.1|	-	0.015	15.1	0.0	1.3	8.7	0.0	2.5	2	1	0	2	2	2	0	DEAD/DEAH	box	helicase
DUF835	PF05763.12	gi|284161655|ref|YP_003400278.1|	-	0.016	15.0	0.2	0.35	10.6	0.0	2.8	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF835)
ATP-synt_ab	PF00006.25	gi|284161655|ref|YP_003400278.1|	-	0.017	14.8	0.0	0.49	10.0	0.0	2.1	1	1	1	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_17	PF13207.6	gi|284161655|ref|YP_003400278.1|	-	0.019	15.4	0.4	1.5	9.3	0.0	2.8	2	1	0	2	2	2	0	AAA	domain
RuvB_N	PF05496.12	gi|284161655|ref|YP_003400278.1|	-	0.023	14.4	0.6	1.2	8.8	0.1	2.9	2	1	0	3	3	3	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DAP3	PF10236.9	gi|284161655|ref|YP_003400278.1|	-	0.038	13.2	0.0	2.2	7.4	0.0	2.7	3	0	0	3	3	3	0	Mitochondrial	ribosomal	death-associated	protein	3
Sigma54_activat	PF00158.26	gi|284161655|ref|YP_003400278.1|	-	0.061	13.0	0.2	1.7	8.3	0.1	2.5	2	0	0	2	2	2	0	Sigma-54	interaction	domain
CLP1_P	PF16575.5	gi|284161655|ref|YP_003400278.1|	-	0.085	12.6	0.1	14	5.4	0.0	2.8	3	0	0	3	3	3	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
Thymidylate_kin	PF02223.17	gi|284161655|ref|YP_003400278.1|	-	0.098	12.3	0.0	3.7	7.2	0.0	2.5	2	0	0	2	2	2	0	Thymidylate	kinase
ParA	PF10609.9	gi|284161655|ref|YP_003400278.1|	-	0.1	12.1	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	NUBPL	iron-transfer	P-loop	NTPase
Mg_chelatase	PF01078.21	gi|284161655|ref|YP_003400278.1|	-	0.16	11.4	0.1	8.6	5.7	0.0	2.7	3	0	0	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
FtsK_SpoIIIE	PF01580.18	gi|284161655|ref|YP_003400278.1|	-	0.17	11.2	1.7	10	5.4	0.0	3.2	4	0	0	4	4	4	0	FtsK/SpoIIIE	family
Response_reg	PF00072.24	gi|284161656|ref|YP_003400279.1|	-	0.12	12.5	0.1	0.49	10.6	0.1	1.9	1	1	0	1	1	1	0	Response	regulator	receiver	domain
DUF4440	PF14534.6	gi|284161656|ref|YP_003400279.1|	-	0.17	12.3	0.0	0.23	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4440)
HisKA	PF00512.25	gi|284161657|ref|YP_003400280.1|	-	0.00041	20.3	0.5	0.0026	17.8	0.0	2.5	3	0	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_4	PF08448.10	gi|284161657|ref|YP_003400280.1|	-	0.00096	19.4	0.0	0.22	11.8	0.0	2.5	1	1	1	2	2	2	2	PAS	fold
DUF349	PF03993.12	gi|284161657|ref|YP_003400280.1|	-	0.02	15.2	0.8	0.02	15.2	0.8	2.7	3	1	0	3	3	3	0	Domain	of	Unknown	Function	(DUF349)
Med2	PF11214.8	gi|284161657|ref|YP_003400280.1|	-	0.037	14.2	0.8	0.037	14.2	0.8	2.5	3	0	0	3	3	3	0	Mediator	complex	subunit	2
DWNN	PF08783.11	gi|284161657|ref|YP_003400280.1|	-	0.082	13.2	6.8	2.7	8.3	0.3	2.9	2	1	0	2	2	2	0	DWNN	domain
SpoVT_C	PF15714.5	gi|284161657|ref|YP_003400280.1|	-	1.9	8.5	8.5	0.17	12.0	1.4	2.6	2	1	1	3	3	3	0	Stage	V	sporulation	protein	T	C-terminal,	transcription	factor
DUF1919	PF08942.10	gi|284161658|ref|YP_003400281.1|	-	0.045	13.2	0.0	0.045	13.2	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1919)
NTP_transf_3	PF12804.7	gi|284161659|ref|YP_003400282.1|	-	2.1e-27	96.4	0.0	2.6e-27	96.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.16	gi|284161659|ref|YP_003400282.1|	-	0.0025	17.0	0.0	0.013	14.7	0.0	1.9	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
AFT	PF08731.11	gi|284161659|ref|YP_003400282.1|	-	0.054	13.9	0.0	0.073	13.5	0.0	1.2	1	0	0	1	1	1	0	Transcription	factor	AFT
Radical_SAM	PF04055.21	gi|284161660|ref|YP_003400283.1|	-	5.7e-31	108.1	2.5	8.5e-31	107.6	0.4	2.2	3	0	0	3	3	3	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.13	gi|284161660|ref|YP_003400283.1|	-	2.2e-18	66.4	0.0	4.1e-18	65.5	0.0	1.5	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_12	PF13353.6	gi|284161660|ref|YP_003400283.1|	-	6.7e-09	36.1	0.3	1.8e-08	34.7	0.1	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284161660|ref|YP_003400283.1|	-	2.5e-07	30.9	0.1	5.4e-07	29.8	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
bPH_5	PF10882.8	gi|284161661|ref|YP_003400284.1|	-	7.5e-27	93.3	0.0	1e-26	92.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	PH	domain
DUF4131	PF13567.6	gi|284161661|ref|YP_003400284.1|	-	0.0043	16.7	0.3	0.0055	16.4	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4131)
DNA_ligase_A_M	PF01068.21	gi|284161662|ref|YP_003400285.1|	-	1.7e-64	217.3	1.9	2.9e-64	216.5	1.9	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|284161662|ref|YP_003400285.1|	-	1.7e-43	149.0	0.2	3.9e-39	134.8	0.0	3.0	2	1	1	3	3	3	3	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|284161662|ref|YP_003400285.1|	-	2.4e-23	82.6	0.1	1e-22	80.6	0.0	2.1	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
RNA_ligase	PF09414.10	gi|284161662|ref|YP_003400285.1|	-	4.2e-08	33.7	0.9	7.5e-08	32.9	0.9	1.4	1	0	0	1	1	1	1	RNA	ligase
DNA_ligase_OB_2	PF14743.6	gi|284161662|ref|YP_003400285.1|	-	0.031	14.3	0.0	0.13	12.4	0.0	2.1	1	1	0	1	1	1	0	DNA	ligase	OB-like	domain
PQQ_2	PF13360.6	gi|284161662|ref|YP_003400285.1|	-	0.11	12.0	0.0	0.47	10.0	0.0	1.8	2	0	0	2	2	2	0	PQQ-like	domain
CDC37_C	PF08564.10	gi|284161662|ref|YP_003400285.1|	-	0.26	11.4	2.3	0.63	10.2	0.9	2.4	2	0	0	2	2	2	0	Cdc37	C	terminal	domain
CGI-121	PF08617.10	gi|284161663|ref|YP_003400286.1|	-	2e-12	47.5	1.1	2.4e-12	47.3	1.1	1.1	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
DUF5638	PF18688.1	gi|284161663|ref|YP_003400286.1|	-	0.018	15.4	1.0	0.027	14.8	0.2	1.7	2	1	0	2	2	2	0	Family	of	unknown	function	(DUF5638)
ATPase	PF06745.13	gi|284161664|ref|YP_003400287.1|	-	9.7e-22	77.4	0.4	1.2e-21	77.2	0.4	1.0	1	0	0	1	1	1	1	KaiC
PAXNEB	PF05625.11	gi|284161664|ref|YP_003400287.1|	-	1.8e-09	37.3	1.2	2.2e-05	23.8	0.2	2.0	1	1	0	2	2	2	2	PAXNEB	protein
Rad51	PF08423.11	gi|284161664|ref|YP_003400287.1|	-	0.035	13.3	0.2	0.06	12.6	0.1	1.5	1	1	0	1	1	1	0	Rad51
DUF1040	PF06288.13	gi|284161664|ref|YP_003400287.1|	-	0.043	14.2	0.2	1.1	9.7	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1040)
IstB_IS21	PF01695.17	gi|284161664|ref|YP_003400287.1|	-	0.05	13.3	0.0	0.13	11.9	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
MEDS	PF14417.6	gi|284161664|ref|YP_003400287.1|	-	0.098	12.5	0.0	0.3	10.9	0.0	1.7	2	0	0	2	2	2	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
SDH_sah	PF01972.16	gi|284161665|ref|YP_003400288.1|	-	8.3e-152	504.1	0.7	1e-151	503.8	0.7	1.0	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.23	gi|284161665|ref|YP_003400288.1|	-	3.1e-07	30.5	0.2	1e-06	28.8	0.0	1.8	2	0	0	2	2	2	1	Clp	protease
Peptidase_S49	PF01343.18	gi|284161665|ref|YP_003400288.1|	-	0.0013	18.7	0.0	0.0023	17.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	S49
ECH_1	PF00378.20	gi|284161665|ref|YP_003400288.1|	-	0.08	12.2	0.2	0.19	11.0	0.0	1.6	1	1	1	2	2	2	0	Enoyl-CoA	hydratase/isomerase
DUF5518	PF17647.1	gi|284161666|ref|YP_003400289.1|	-	0.0016	18.6	14.8	0.002	18.2	14.8	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
DUF751	PF05421.11	gi|284161666|ref|YP_003400289.1|	-	0.023	15.4	0.8	0.023	15.4	0.8	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF751)
DUF624	PF04854.14	gi|284161666|ref|YP_003400289.1|	-	0.36	11.0	0.2	0.36	11.0	0.2	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF624
DUF2207	PF09972.9	gi|284161666|ref|YP_003400289.1|	-	0.5	9.1	10.1	0.56	8.9	10.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
TctB	PF07331.11	gi|284161666|ref|YP_003400289.1|	-	1.4	9.2	17.0	1.8	8.8	17.0	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
MgtE	PF01769.16	gi|284161666|ref|YP_003400289.1|	-	2.2	8.7	11.8	1.7	9.1	10.4	1.5	1	1	0	1	1	1	0	Divalent	cation	transporter
DUF1129	PF06570.11	gi|284161666|ref|YP_003400289.1|	-	3.9	6.9	5.7	1.8	8.0	2.2	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
HTH_24	PF13412.6	gi|284161667|ref|YP_003400290.1|	-	3.3e-12	45.7	1.7	5.7e-12	45.0	1.7	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|284161667|ref|YP_003400290.1|	-	2.7e-09	36.7	0.1	4.4e-09	36.0	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.21	gi|284161667|ref|YP_003400290.1|	-	2.3e-06	27.5	0.0	4.6e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
MarR	PF01047.22	gi|284161667|ref|YP_003400290.1|	-	2.6e-05	24.1	0.2	4.1e-05	23.4	0.2	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|284161667|ref|YP_003400290.1|	-	0.00088	19.1	0.0	0.0014	18.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|284161667|ref|YP_003400290.1|	-	0.0051	16.7	1.0	0.0092	15.9	1.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.6	gi|284161667|ref|YP_003400290.1|	-	0.034	14.7	0.1	0.062	13.8	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_20	PF12840.7	gi|284161667|ref|YP_003400290.1|	-	0.045	13.8	0.0	0.073	13.1	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|284161667|ref|YP_003400290.1|	-	0.063	13.3	1.7	0.083	12.9	0.4	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
Rrf2	PF02082.20	gi|284161667|ref|YP_003400290.1|	-	0.086	13.2	0.1	0.18	12.1	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
LexA_DNA_bind	PF01726.16	gi|284161667|ref|YP_003400290.1|	-	0.091	12.6	0.2	0.16	11.7	0.2	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
DUF3795	PF12675.7	gi|284161667|ref|YP_003400290.1|	-	0.31	11.5	4.8	0.91	10.0	4.8	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3795)
TauE	PF01925.19	gi|284161668|ref|YP_003400291.1|	-	4.2e-46	157.5	43.1	4.7e-46	157.3	43.1	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
OrfB_Zn_ribbon	PF07282.11	gi|284161669|ref|YP_003400292.1|	-	0.064	13.2	0.0	0.19	11.7	0.0	1.8	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Radical_SAM	PF04055.21	gi|284161670|ref|YP_003400293.1|	-	3.9e-20	72.9	0.0	5.6e-20	72.4	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284161670|ref|YP_003400293.1|	-	1.5e-05	25.3	0.0	2.1e-05	24.8	0.0	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284161670|ref|YP_003400293.1|	-	0.0064	16.6	0.0	0.012	15.8	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
LPG_synthase_TM	PF03706.13	gi|284161671|ref|YP_003400294.1|	-	9e-41	140.4	33.1	1.1e-40	140.1	33.1	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
Nudc_N	PF14050.6	gi|284161671|ref|YP_003400294.1|	-	2.9	8.0	7.1	0.26	11.3	0.3	2.6	3	0	0	3	3	3	0	N-terminal	conserved	domain	of	Nudc.
Glycos_transf_2	PF00535.26	gi|284161672|ref|YP_003400295.1|	-	8.9e-16	58.2	0.0	1.4e-15	57.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284161672|ref|YP_003400295.1|	-	4.8e-05	23.4	0.0	8.9e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|284161672|ref|YP_003400295.1|	-	0.036	13.5	0.0	1.5	8.3	0.0	2.4	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
His_biosynth	PF00977.21	gi|284161672|ref|YP_003400295.1|	-	0.15	11.5	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Amino_oxidase	PF01593.24	gi|284161673|ref|YP_003400296.1|	-	1.1e-16	61.2	0.0	1.4e-15	57.6	0.0	2.1	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.6	gi|284161673|ref|YP_003400296.1|	-	1.5e-08	34.7	0.2	3e-08	33.8	0.2	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|284161673|ref|YP_003400296.1|	-	8.7e-05	22.3	0.0	0.00019	21.1	0.0	1.6	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|284161673|ref|YP_003400296.1|	-	0.061	12.5	0.1	7.2	5.8	0.0	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|284161673|ref|YP_003400296.1|	-	0.16	11.2	0.6	13	5.0	0.1	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
MAF_flag10	PF01973.18	gi|284161674|ref|YP_003400297.1|	-	2e-15	56.9	0.0	2.7e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
SNase	PF00565.17	gi|284161675|ref|YP_003400298.1|	-	7.8e-27	93.9	0.2	1e-26	93.5	0.2	1.1	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
tRNA-synt_1c	PF00749.21	gi|284161676|ref|YP_003400299.1|	-	3.8e-73	246.1	0.0	4.9e-73	245.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|284161676|ref|YP_003400299.1|	-	5.1e-27	94.9	0.2	2e-26	92.9	0.2	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
DUF3294	PF07957.11	gi|284161676|ref|YP_003400299.1|	-	0.11	12.2	0.2	2.8	7.7	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3294)
Ku	PF02735.16	gi|284161676|ref|YP_003400299.1|	-	0.14	11.8	0.1	0.26	11.0	0.1	1.4	1	0	0	1	1	1	0	Ku70/Ku80	beta-barrel	domain
Strep_his_triad	PF04270.13	gi|284161676|ref|YP_003400299.1|	-	0.19	11.8	0.3	68	3.6	0.1	3.4	3	0	0	3	3	3	0	Streptococcal	histidine	triad	protein
UPF0113	PF03657.13	gi|284161677|ref|YP_003400300.1|	-	1.2e-27	96.0	0.9	1.9e-27	95.3	0.9	1.3	1	0	0	1	1	1	1	UPF0113	PUA	domain
PUA	PF01472.20	gi|284161677|ref|YP_003400300.1|	-	3e-09	36.7	0.3	5.6e-09	35.8	0.3	1.4	1	0	0	1	1	1	1	PUA	domain
UPF0113_N	PF17833.1	gi|284161677|ref|YP_003400300.1|	-	1.3e-05	25.6	1.7	2.3e-05	24.9	0.4	2.0	1	1	1	2	2	2	1	UPF0113	Pre-PUA	domain
PduV-EutP	PF10662.9	gi|284161678|ref|YP_003400301.1|	-	0.089	12.5	0.0	0.17	11.6	0.0	1.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
MacB_PCD	PF12704.7	gi|284161678|ref|YP_003400301.1|	-	0.11	12.8	0.0	3.7	7.9	0.0	1.8	1	1	1	2	2	2	0	MacB-like	periplasmic	core	domain
Phage_TAC_5	PF08890.11	gi|284161679|ref|YP_003400302.1|	-	0.12	12.4	0.2	0.47	10.4	0.0	2.1	3	0	0	3	3	3	0	Phage	XkdN-like	tail	assembly	chaperone	protein,	TAC
PemK_toxin	PF02452.17	gi|284161680|ref|YP_003400303.1|	-	9.2e-20	71.1	0.1	1e-19	71.0	0.1	1.0	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
DDE_Tnp_1	PF01609.21	gi|284161682|ref|YP_003400305.1|	-	5.1e-10	39.4	1.1	7.4e-10	38.8	1.1	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
Toprim_4	PF13662.6	gi|284161683|ref|YP_003400306.1|	-	0.1	13.1	0.1	0.41	11.2	0.0	2.2	2	2	0	2	2	2	0	Toprim	domain
N6_Mtase	PF02384.16	gi|284161684|ref|YP_003400307.1|	-	4.8e-10	39.2	0.0	3.6e-07	29.8	0.0	3.2	2	1	0	2	2	2	1	N-6	DNA	Methylase
MTS	PF05175.14	gi|284161684|ref|YP_003400307.1|	-	0.0032	17.0	0.0	2.4	7.7	0.0	2.8	3	0	0	3	3	3	2	Methyltransferase	small	domain
Unstab_antitox	PF09720.10	gi|284161684|ref|YP_003400307.1|	-	0.049	13.7	0.2	0.15	12.2	0.2	1.8	1	0	0	1	1	1	0	Putative	addiction	module	component
Prok-JAB	PF14464.6	gi|284161685|ref|YP_003400308.1|	-	1.5e-12	47.3	0.0	1.8e-12	47.1	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
RadC	PF04002.15	gi|284161685|ref|YP_003400308.1|	-	0.021	14.8	0.1	0.042	13.8	0.1	1.4	1	0	0	1	1	1	0	RadC-like	JAB	domain
HP1451_C	PF18472.1	gi|284161685|ref|YP_003400308.1|	-	0.17	11.9	0.0	0.26	11.3	0.0	1.2	1	0	0	1	1	1	0	HP1451	C-terminal	domain
Toxin-JAB1	PF15659.6	gi|284161685|ref|YP_003400308.1|	-	0.2	12.0	0.1	0.39	11.1	0.0	1.5	2	0	0	2	2	2	0	JAB-like	toxin	1
Alpha_Helical	PF18489.1	gi|284161686|ref|YP_003400309.1|	-	1.4e-12	47.9	1.4	2.6e-12	47.0	0.8	1.7	2	0	0	2	2	2	1	Alpha	helical	domain
tRNA_bind	PF01588.20	gi|284161686|ref|YP_003400309.1|	-	0.00082	19.4	0.0	0.0016	18.5	0.0	1.5	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
DUF496	PF04363.12	gi|284161686|ref|YP_003400309.1|	-	0.097	12.7	4.5	0.053	13.6	2.4	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF496)
Sld5	PF05916.11	gi|284161686|ref|YP_003400309.1|	-	0.35	11.3	6.5	2	8.9	0.2	2.4	2	1	1	3	3	3	0	GINS	complex	protein
U3_assoc_6	PF08640.11	gi|284161686|ref|YP_003400309.1|	-	0.59	10.2	7.5	12	6.0	0.1	3.2	2	1	1	3	3	3	0	U3	small	nucleolar	RNA-associated	protein	6
Pyridoxal_deC	PF00282.19	gi|284161687|ref|YP_003400310.1|	-	3.2e-39	134.7	0.0	9.2e-39	133.2	0.0	1.6	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_1_2	PF00155.21	gi|284161687|ref|YP_003400310.1|	-	2.1e-13	50.2	0.0	2.8e-13	49.8	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|284161687|ref|YP_003400310.1|	-	1.4e-11	44.0	0.0	7.1e-09	35.1	0.0	2.0	2	0	0	2	2	2	2	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|284161687|ref|YP_003400310.1|	-	0.00027	20.3	0.0	0.0004	19.8	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
zinc_ribbon_4	PF13717.6	gi|284161687|ref|YP_003400310.1|	-	0.044	13.7	0.0	0.085	12.8	0.0	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF211	PF02680.14	gi|284161688|ref|YP_003400311.1|	-	1.2e-37	127.9	1.2	1.4e-37	127.7	1.2	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
ATPase	PF06745.13	gi|284161689|ref|YP_003400312.1|	-	2e-55	187.7	1.3	2.4e-55	187.4	1.3	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|284161689|ref|YP_003400312.1|	-	3e-10	40.0	0.0	4e-10	39.6	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.11	gi|284161689|ref|YP_003400312.1|	-	6.1e-10	38.3	0.5	8.8e-10	37.8	0.5	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.21	gi|284161689|ref|YP_003400312.1|	-	1.6e-06	27.8	0.4	8.2e-06	25.5	0.4	1.9	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
DnaB_C	PF03796.15	gi|284161689|ref|YP_003400312.1|	-	5.9e-06	25.8	0.0	0.00027	20.4	0.0	2.1	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.9	gi|284161689|ref|YP_003400312.1|	-	0.00025	20.4	0.0	0.00033	20.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ATP-synt_ab	PF00006.25	gi|284161689|ref|YP_003400312.1|	-	0.00028	20.6	0.1	0.0012	18.5	0.0	1.9	2	1	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
IstB_IS21	PF01695.17	gi|284161689|ref|YP_003400312.1|	-	0.0017	18.1	0.0	0.0038	17.0	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.6	gi|284161689|ref|YP_003400312.1|	-	0.004	17.5	0.1	0.0066	16.8	0.1	1.3	1	1	0	1	1	1	1	AAA	domain
PAXNEB	PF05625.11	gi|284161689|ref|YP_003400312.1|	-	0.0057	15.9	0.1	0.096	11.8	0.0	2.0	2	0	0	2	2	2	1	PAXNEB	protein
AAA_14	PF13173.6	gi|284161689|ref|YP_003400312.1|	-	0.0083	16.2	0.0	0.033	14.2	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|284161689|ref|YP_003400312.1|	-	0.014	15.1	0.2	0.031	14.0	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284161689|ref|YP_003400312.1|	-	0.022	14.5	0.0	0.052	13.3	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Rad51	PF08423.11	gi|284161689|ref|YP_003400312.1|	-	0.022	14.0	0.1	0.047	12.9	0.1	1.5	1	0	0	1	1	1	0	Rad51
NACHT	PF05729.12	gi|284161689|ref|YP_003400312.1|	-	0.075	12.9	0.0	0.26	11.2	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_11	PF13086.6	gi|284161689|ref|YP_003400312.1|	-	0.075	12.8	0.2	0.22	11.3	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
DAP3	PF10236.9	gi|284161689|ref|YP_003400312.1|	-	0.11	11.7	0.0	0.18	10.9	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Nsp3_PL2pro	PF12124.8	gi|284161689|ref|YP_003400312.1|	-	0.13	12.0	0.0	0.27	11.0	0.0	1.5	1	0	0	1	1	1	0	Coronavirus	polyprotein	cleavage	domain
DUF835	PF05763.12	gi|284161690|ref|YP_003400313.1|	-	6.7e-09	35.6	1.0	9.7e-09	35.1	1.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
DUF257	PF03192.13	gi|284161690|ref|YP_003400313.1|	-	0.012	15.4	2.2	0.46	10.2	2.2	2.6	1	1	0	1	1	1	0	Pyrococcus	protein	of	unknown	function,	DUF257
ATPase	PF06745.13	gi|284161691|ref|YP_003400314.1|	-	4.7e-05	22.8	5.0	0.03	13.6	1.1	2.0	1	1	1	2	2	2	2	KaiC
DUF835	PF05763.12	gi|284161691|ref|YP_003400314.1|	-	0.0011	18.7	0.7	0.0011	18.7	0.7	1.6	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF835)
F-box_4	PF15966.5	gi|284161691|ref|YP_003400314.1|	-	0.043	13.7	0.1	0.13	12.2	0.0	1.7	1	1	1	2	2	2	0	F-box
PAXNEB	PF05625.11	gi|284161691|ref|YP_003400314.1|	-	0.11	11.6	0.1	1.2	8.2	0.0	1.9	2	0	0	2	2	2	0	PAXNEB	protein
AIRS	PF00586.24	gi|284161692|ref|YP_003400315.1|	-	5.1e-22	78.3	0.0	8.7e-22	77.6	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|284161692|ref|YP_003400315.1|	-	2e-06	28.1	0.0	3.9e-06	27.1	0.0	1.5	1	1	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
tRNA-synt_1b	PF00579.25	gi|284161693|ref|YP_003400316.1|	-	4.1e-40	137.9	0.0	8.4e-24	84.4	0.0	2.0	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
VitK2_biosynth	PF02621.14	gi|284161694|ref|YP_003400317.1|	-	2e-52	178.4	0.0	2.2e-52	178.2	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
Radical_SAM	PF04055.21	gi|284161695|ref|YP_003400318.1|	-	6.9e-12	46.1	0.1	1.2e-11	45.2	0.1	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284161695|ref|YP_003400318.1|	-	1e-08	35.6	0.1	2.1e-08	34.5	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284161695|ref|YP_003400318.1|	-	6.3e-07	29.5	0.1	1.2e-06	28.6	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
MFS_1	PF07690.16	gi|284161696|ref|YP_003400319.1|	-	8.5e-43	146.6	47.8	4.3e-31	108.1	18.9	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|284161696|ref|YP_003400319.1|	-	3.5e-13	49.2	31.0	4.3e-10	39.1	9.4	2.5	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|284161696|ref|YP_003400319.1|	-	1.1e-12	47.6	27.5	8.8e-11	41.3	8.8	3.8	2	1	2	4	4	4	3	MFS_1	like	family
MFS_3	PF05977.13	gi|284161696|ref|YP_003400319.1|	-	5.8e-06	25.0	16.1	0.00033	19.2	16.1	2.1	1	1	0	1	1	1	1	Transmembrane	secretion	effector
PUCC	PF03209.15	gi|284161696|ref|YP_003400319.1|	-	7.1e-05	22.0	19.5	0.0049	15.9	6.2	2.9	2	1	1	3	3	3	2	PUCC	protein
Methyltr_RsmB-F	PF01189.17	gi|284161697|ref|YP_003400320.1|	-	6.2e-53	179.4	0.0	8e-53	179.1	0.0	1.1	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|284161697|ref|YP_003400320.1|	-	1.3e-20	73.7	0.0	3.5e-20	72.3	0.0	1.7	2	0	0	2	2	2	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
FtsJ	PF01728.19	gi|284161697|ref|YP_003400320.1|	-	5.3e-06	26.7	0.0	8.1e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Met_10	PF02475.16	gi|284161697|ref|YP_003400320.1|	-	9e-05	22.3	0.0	0.00012	21.9	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_31	PF13847.6	gi|284161697|ref|YP_003400320.1|	-	0.0018	18.1	0.0	0.0026	17.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|284161697|ref|YP_003400320.1|	-	0.008	15.8	0.0	0.012	15.3	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|284161697|ref|YP_003400320.1|	-	0.008	16.9	0.1	0.052	14.3	0.0	2.3	3	0	0	3	3	3	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|284161697|ref|YP_003400320.1|	-	0.043	13.2	0.0	0.069	12.5	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
CbiQ	PF02361.16	gi|284161698|ref|YP_003400321.1|	-	0.1	12.2	11.6	0.32	10.6	11.6	1.9	1	1	0	1	1	1	0	Cobalt	transport	protein
ABC_tran	PF00005.27	gi|284161699|ref|YP_003400322.1|	-	4.9e-30	104.8	1.1	1.9e-13	51.1	0.1	3.4	2	2	1	3	3	3	2	ABC	transporter
AAA_21	PF13304.6	gi|284161699|ref|YP_003400322.1|	-	1.2e-20	74.6	6.1	1.2e-06	28.6	0.3	4.1	4	0	0	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|284161699|ref|YP_003400322.1|	-	6.6e-11	42.5	0.2	0.014	15.1	0.1	3.2	2	1	1	3	3	3	3	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284161699|ref|YP_003400322.1|	-	1.4e-08	35.5	0.2	0.0082	16.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.6	gi|284161699|ref|YP_003400322.1|	-	3.8e-08	33.9	0.0	0.0024	18.3	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.19	gi|284161699|ref|YP_003400322.1|	-	1.2e-07	31.4	2.3	0.66	9.4	0.0	4.1	4	0	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|284161699|ref|YP_003400322.1|	-	2.2e-07	30.5	0.2	0.0046	16.7	0.0	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
DUF3584	PF12128.8	gi|284161699|ref|YP_003400322.1|	-	2.5e-05	22.1	0.2	0.014	13.0	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3584)
NTPase_1	PF03266.15	gi|284161699|ref|YP_003400322.1|	-	3.1e-05	23.9	0.6	0.13	12.2	0.0	2.8	2	1	1	3	3	2	2	NTPase
NB-ARC	PF00931.22	gi|284161699|ref|YP_003400322.1|	-	3.3e-05	23.2	0.3	0.022	13.9	0.1	2.7	3	0	0	3	3	3	1	NB-ARC	domain
AAA_33	PF13671.6	gi|284161699|ref|YP_003400322.1|	-	3.5e-05	24.0	0.4	0.24	11.5	0.1	2.6	2	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|284161699|ref|YP_003400322.1|	-	3.5e-05	24.1	0.2	0.057	13.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Rad17	PF03215.15	gi|284161699|ref|YP_003400322.1|	-	3.8e-05	23.7	0.3	0.0047	16.9	0.0	2.5	2	0	0	2	2	2	1	Rad17	P-loop	domain
NACHT	PF05729.12	gi|284161699|ref|YP_003400322.1|	-	5e-05	23.3	0.4	0.26	11.2	0.2	2.3	2	0	0	2	2	2	2	NACHT	domain
AAA_18	PF13238.6	gi|284161699|ref|YP_003400322.1|	-	7.8e-05	23.2	1.2	0.32	11.5	0.0	2.6	2	1	0	2	2	2	2	AAA	domain
RsgA_GTPase	PF03193.16	gi|284161699|ref|YP_003400322.1|	-	0.00011	22.1	0.3	0.014	15.3	0.0	2.4	2	0	0	2	2	2	1	RsgA	GTPase
AAA	PF00004.29	gi|284161699|ref|YP_003400322.1|	-	0.00014	22.3	0.2	0.026	15.0	0.1	2.6	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.14	gi|284161699|ref|YP_003400322.1|	-	0.00016	21.5	1.8	0.096	12.6	0.2	2.4	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATPase_2	PF01637.18	gi|284161699|ref|YP_003400322.1|	-	0.00036	20.5	0.1	0.5	10.2	0.0	2.3	2	0	0	2	2	2	2	ATPase	domain	predominantly	from	Archaea
SRP54	PF00448.22	gi|284161699|ref|YP_003400322.1|	-	0.0004	20.1	2.3	0.11	12.2	0.1	2.7	3	0	0	3	3	3	1	SRP54-type	protein,	GTPase	domain
AAA_14	PF13173.6	gi|284161699|ref|YP_003400322.1|	-	0.00073	19.6	0.5	0.2	11.7	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|284161699|ref|YP_003400322.1|	-	0.00084	19.1	0.2	1.5	8.5	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.22	gi|284161699|ref|YP_003400322.1|	-	0.00091	19.6	0.1	2.1	8.8	0.0	2.3	2	0	0	2	2	2	2	RNA	helicase
cobW	PF02492.19	gi|284161699|ref|YP_003400322.1|	-	0.0018	17.9	2.1	0.24	11.0	0.1	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_13	PF13166.6	gi|284161699|ref|YP_003400322.1|	-	0.0025	16.6	0.4	1.2	7.7	0.0	2.6	3	0	0	3	3	3	2	AAA	domain
AAA_8	PF12780.7	gi|284161699|ref|YP_003400322.1|	-	0.0041	16.5	0.1	1.3	8.3	0.1	2.3	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region	D4
Zeta_toxin	PF06414.12	gi|284161699|ref|YP_003400322.1|	-	0.0057	15.9	0.0	2.2	7.5	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
Mg_chelatase	PF01078.21	gi|284161699|ref|YP_003400322.1|	-	0.006	16.0	0.1	0.62	9.4	0.0	2.5	3	0	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.23	gi|284161699|ref|YP_003400322.1|	-	0.01	15.9	0.3	0.86	9.7	0.1	2.5	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.14	gi|284161699|ref|YP_003400322.1|	-	0.015	15.3	1.6	2.8	7.9	0.1	3.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|284161699|ref|YP_003400322.1|	-	0.02	15.1	0.2	1	9.6	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
PIF1	PF05970.14	gi|284161699|ref|YP_003400322.1|	-	0.022	14.0	0.1	2.7	7.0	0.0	2.4	2	0	0	2	2	2	0	PIF1-like	helicase
SbcCD_C	PF13558.6	gi|284161699|ref|YP_003400322.1|	-	0.024	14.9	0.0	0.67	10.2	0.0	2.4	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.6	gi|284161699|ref|YP_003400322.1|	-	0.029	13.9	0.2	4	7.0	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.9	gi|284161699|ref|YP_003400322.1|	-	0.036	13.8	2.1	2.1	8.1	0.2	2.7	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_24	PF13479.6	gi|284161699|ref|YP_003400322.1|	-	0.039	13.7	2.1	6.2	6.5	0.1	2.8	3	0	0	3	3	3	0	AAA	domain
Viral_helicase1	PF01443.18	gi|284161699|ref|YP_003400322.1|	-	0.056	13.2	1.2	0.99	9.1	0.1	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
ATP_bind_1	PF03029.17	gi|284161699|ref|YP_003400322.1|	-	0.069	12.9	1.4	3.7	7.2	0.1	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
T2SSE	PF00437.20	gi|284161699|ref|YP_003400322.1|	-	0.071	12.2	0.1	3.4	6.7	0.0	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.6	gi|284161699|ref|YP_003400322.1|	-	0.085	13.2	0.5	7.9	6.8	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|284161699|ref|YP_003400322.1|	-	0.13	12.0	0.4	6	6.5	0.0	2.4	2	0	0	2	2	2	0	Thymidylate	kinase
DLIC	PF05783.11	gi|284161699|ref|YP_003400322.1|	-	0.14	10.9	0.1	8.2	5.1	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
TsaE	PF02367.17	gi|284161699|ref|YP_003400322.1|	-	0.15	12.1	0.4	3.9	7.5	0.0	2.3	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
dNK	PF01712.19	gi|284161699|ref|YP_003400322.1|	-	0.16	11.8	0.4	5.6	6.8	0.1	2.3	2	0	0	2	2	2	0	Deoxynucleoside	kinase
PRK	PF00485.18	gi|284161699|ref|YP_003400322.1|	-	0.17	11.6	0.0	3	7.5	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_17	PF13207.6	gi|284161699|ref|YP_003400322.1|	-	0.32	11.4	2.7	21	5.5	0.2	2.6	2	1	0	2	2	2	0	AAA	domain
BioY	PF02632.14	gi|284161700|ref|YP_003400323.1|	-	7.6e-24	84.3	14.1	1.1e-23	83.7	14.1	1.3	1	0	0	1	1	1	1	BioY	family
Tom7	PF08038.12	gi|284161700|ref|YP_003400323.1|	-	0.026	14.2	0.6	0.075	12.7	0.6	1.8	1	0	0	1	1	1	0	TOM7	family
GTP_EFTU	PF00009.27	gi|284161701|ref|YP_003400324.1|	-	2.2e-37	128.5	0.1	3.6e-37	127.8	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|284161701|ref|YP_003400324.1|	-	9.1e-14	51.6	1.5	9.1e-14	51.6	1.5	3.1	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D3	PF03143.17	gi|284161701|ref|YP_003400324.1|	-	3.5e-09	36.9	0.1	1e-08	35.5	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
AlbA_2	PF04326.14	gi|284161701|ref|YP_003400324.1|	-	7e-07	29.6	1.9	7e-07	29.6	1.9	2.0	2	0	0	2	2	2	1	Putative	DNA-binding	domain
RsgA_GTPase	PF03193.16	gi|284161701|ref|YP_003400324.1|	-	0.00077	19.4	0.9	0.056	13.4	0.2	2.3	2	0	0	2	2	2	1	RsgA	GTPase
ATP_bind_1	PF03029.17	gi|284161701|ref|YP_003400324.1|	-	0.0037	17.1	0.3	0.025	14.4	0.1	2.2	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
DUF4941	PF16299.5	gi|284161701|ref|YP_003400324.1|	-	0.014	14.7	0.1	0.027	13.8	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4941)
MMR_HSR1	PF01926.23	gi|284161701|ref|YP_003400324.1|	-	0.039	14.0	0.0	0.35	11.0	0.0	2.5	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
Sec23_trunk	PF04811.15	gi|284161701|ref|YP_003400324.1|	-	0.044	13.4	0.0	0.076	12.6	0.0	1.3	1	0	0	1	1	1	0	Sec23/Sec24	trunk	domain
FeoB_N	PF02421.18	gi|284161701|ref|YP_003400324.1|	-	0.87	9.1	3.5	6.6	6.2	0.5	2.8	2	1	1	3	3	3	0	Ferrous	iron	transport	protein	B
DUF401	PF04165.12	gi|284161702|ref|YP_003400325.1|	-	1.2e-80	271.8	33.4	1.3e-80	271.6	33.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF401)
Osmo_MPGsynth	PF09488.10	gi|284161703|ref|YP_003400326.1|	-	2e-154	514.0	0.0	2.2e-154	513.8	0.0	1.0	1	0	0	1	1	1	1	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
Hydrolase_3	PF08282.12	gi|284161704|ref|YP_003400327.1|	-	2.6e-13	50.3	0.0	2.2e-11	44.0	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|284161704|ref|YP_003400327.1|	-	0.00053	20.4	0.3	0.69	10.3	0.0	2.6	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|284161704|ref|YP_003400327.1|	-	0.00065	19.3	0.0	0.96	8.9	0.0	2.3	2	1	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|284161704|ref|YP_003400327.1|	-	0.019	15.3	0.1	0.68	10.2	0.1	2.4	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|284161704|ref|YP_003400327.1|	-	0.04	14.0	0.0	0.083	13.0	0.0	1.7	1	1	1	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
BtrH_N	PF14399.6	gi|284161704|ref|YP_003400327.1|	-	0.065	13.5	0.0	0.14	12.5	0.0	1.5	1	0	0	1	1	1	0	Butirosin	biosynthesis	protein	H,	N-terminal
RuvC_III	PF18541.1	gi|284161704|ref|YP_003400327.1|	-	0.15	12.0	0.0	0.2	11.6	0.0	1.2	1	0	0	1	1	1	0	RuvC	endonuclease	subdomain	3
Glyco_hydro_38N	PF01074.22	gi|284161705|ref|YP_003400328.1|	-	4.5e-57	193.6	0.0	7.1e-57	193.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.13	gi|284161705|ref|YP_003400328.1|	-	2.3e-20	73.6	0.0	4.2e-20	72.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Glyco_hydro38C2	PF17677.1	gi|284161705|ref|YP_003400328.1|	-	2.6e-15	56.3	0.3	7.8e-15	54.7	0.3	1.9	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	beta	sandwich	domain
Alpha-mann_mid	PF09261.11	gi|284161705|ref|YP_003400328.1|	-	3.4e-11	43.1	0.0	7.9e-11	42.0	0.0	1.6	1	0	0	1	1	1	1	Alpha	mannosidase	middle	domain
Glyco_hydro_57	PF03065.15	gi|284161705|ref|YP_003400328.1|	-	2.3e-05	23.8	0.7	5e-05	22.7	0.2	1.7	2	0	0	2	2	2	1	Glycosyl	hydrolase	family	57
Aminotran_3	PF00202.21	gi|284161706|ref|YP_003400329.1|	-	8.7e-65	218.9	0.0	1e-64	218.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Get5_C	PF18514.1	gi|284161706|ref|YP_003400329.1|	-	0.13	12.0	0.0	16	5.3	0.0	2.5	2	0	0	2	2	2	0	Get5	C-terminal	domain
Porphobil_deam	PF01379.20	gi|284161707|ref|YP_003400330.1|	-	4.3e-71	238.6	0.0	5.4e-71	238.3	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.15	gi|284161707|ref|YP_003400330.1|	-	1.4e-07	31.8	0.6	2.8e-07	30.8	0.6	1.5	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
VbhA	PF18495.1	gi|284161707|ref|YP_003400330.1|	-	0.0083	16.0	0.1	0.71	9.8	0.0	2.5	2	0	0	2	2	2	1	Antitoxin	VbhA
TP_methylase	PF00590.20	gi|284161708|ref|YP_003400331.1|	-	2.6e-56	190.9	0.1	3.4e-56	190.5	0.1	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Radical_SAM	PF04055.21	gi|284161708|ref|YP_003400331.1|	-	0.026	14.9	0.1	0.069	13.5	0.1	1.9	1	1	0	1	1	1	0	Radical	SAM	superfamily
ApbA_C	PF08546.11	gi|284161708|ref|YP_003400331.1|	-	0.036	14.3	0.2	2.1	8.6	0.0	2.5	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
Fer4_12	PF13353.6	gi|284161708|ref|YP_003400331.1|	-	0.14	12.4	0.1	0.68	10.2	0.0	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
NSP16	PF06460.12	gi|284161708|ref|YP_003400331.1|	-	0.35	9.9	1.0	0.67	9.0	0.1	1.8	2	0	0	2	2	2	0	Coronavirus	NSP16
Aldolase_II	PF00596.21	gi|284161709|ref|YP_003400332.1|	-	6.8e-34	117.4	0.0	7.6e-34	117.3	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
PAPS_reduct	PF01507.19	gi|284161710|ref|YP_003400333.1|	-	5.1e-33	114.5	0.0	1.2e-32	113.3	0.0	1.6	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_3	PF01171.20	gi|284161710|ref|YP_003400333.1|	-	2.7e-05	24.0	0.0	4.6e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
QueC	PF06508.13	gi|284161710|ref|YP_003400333.1|	-	8.9e-05	22.1	0.0	0.00018	21.1	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.17	gi|284161710|ref|YP_003400333.1|	-	0.0072	15.5	0.0	0.014	14.6	0.0	1.5	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|284161710|ref|YP_003400333.1|	-	0.074	11.8	0.1	0.2	10.4	0.0	1.7	2	0	0	2	2	2	0	tRNA	methyl	transferase
MMR_HSR1	PF01926.23	gi|284161711|ref|YP_003400334.1|	-	3.4e-17	62.6	0.0	8.4e-17	61.3	0.0	1.6	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|284161711|ref|YP_003400334.1|	-	3.4e-12	46.2	0.1	1.3e-11	44.2	0.1	1.9	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|284161711|ref|YP_003400334.1|	-	0.0014	18.6	0.8	0.029	14.3	0.2	2.8	1	1	0	2	2	2	1	RsgA	GTPase
Dynamin_N	PF00350.23	gi|284161711|ref|YP_003400334.1|	-	0.0046	17.0	0.1	0.22	11.6	0.1	2.4	1	1	1	2	2	2	2	Dynamin	family
GTP_EFTU	PF00009.27	gi|284161711|ref|YP_003400334.1|	-	0.0063	16.1	0.0	0.39	10.2	0.1	2.3	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Septin	PF00735.18	gi|284161711|ref|YP_003400334.1|	-	0.013	14.8	0.3	0.32	10.2	0.3	2.2	1	1	0	1	1	1	0	Septin
MobB	PF03205.14	gi|284161711|ref|YP_003400334.1|	-	0.08	12.8	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Roc	PF08477.13	gi|284161711|ref|YP_003400334.1|	-	0.23	11.7	0.4	0.6	10.3	0.0	1.9	3	0	0	3	3	3	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Sec61_beta	PF03911.16	gi|284161712|ref|YP_003400335.1|	-	3.1e-17	62.3	0.1	3.7e-17	62.1	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
DUF99	PF01949.16	gi|284161713|ref|YP_003400336.1|	-	7.8e-57	191.6	0.0	8.7e-57	191.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Endonuclease_5	PF04493.14	gi|284161713|ref|YP_003400336.1|	-	0.13	11.9	0.0	0.39	10.4	0.0	1.8	2	0	0	2	2	2	0	Endonuclease	V
AzlD	PF05437.12	gi|284161714|ref|YP_003400337.1|	-	2.9e-16	59.4	2.1	3.3e-16	59.3	2.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	protein	(AzlD)
SfLAP	PF11139.8	gi|284161714|ref|YP_003400337.1|	-	0.0005	19.6	0.4	0.00061	19.3	0.4	1.1	1	0	0	1	1	1	1	Sap,	sulfolipid-1-addressing	protein
TctB	PF07331.11	gi|284161714|ref|YP_003400337.1|	-	0.096	13.0	3.8	0.13	12.5	3.8	1.2	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
AzlC	PF03591.14	gi|284161715|ref|YP_003400338.1|	-	5.4e-35	120.8	6.0	5.4e-35	120.8	6.0	1.6	2	0	0	2	2	2	1	AzlC	protein
GerA	PF03323.13	gi|284161715|ref|YP_003400338.1|	-	1.7	7.0	5.8	2.4	6.5	5.8	1.1	1	0	0	1	1	1	0	Bacillus/Clostridium	GerA	spore	germination	protein
SHS2_Rpb7-N	PF03876.17	gi|284161716|ref|YP_003400339.1|	-	5.8e-18	65.0	0.0	1.1e-17	64.1	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|284161716|ref|YP_003400339.1|	-	1.2e-13	51.2	0.5	1.2e-13	51.2	0.5	1.8	2	0	0	2	2	2	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.12	gi|284161716|ref|YP_003400339.1|	-	0.0015	18.8	0.0	0.0022	18.2	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	Rpc25
SAF	PF08666.12	gi|284161716|ref|YP_003400339.1|	-	0.011	16.4	0.1	0.29	11.8	0.0	2.6	3	0	0	3	3	3	0	SAF	domain
S1_2	PF13509.6	gi|284161716|ref|YP_003400339.1|	-	0.045	13.8	0.0	0.37	10.9	0.0	2.2	1	1	1	2	2	2	0	S1	domain
Spt4	PF06093.13	gi|284161717|ref|YP_003400340.1|	-	2.2e-15	56.5	0.2	2.6e-15	56.3	0.2	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Fer4_2	PF12797.7	gi|284161717|ref|YP_003400340.1|	-	0.17	12.0	3.8	0.48	10.6	0.3	2.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|284161717|ref|YP_003400340.1|	-	0.34	10.8	0.5	0.34	10.8	0.5	2.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
DUF359	PF04019.12	gi|284161718|ref|YP_003400341.1|	-	7.6e-35	119.3	0.2	9.6e-35	119.0	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Ribosomal_S24e	PF01282.19	gi|284161719|ref|YP_003400342.1|	-	1.1e-19	70.1	0.0	1.4e-19	69.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Ribosomal_S27	PF01599.19	gi|284161720|ref|YP_003400343.1|	-	9.5e-22	76.9	5.1	1.2e-21	76.6	5.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27a
zinc_ribbon_2	PF13240.6	gi|284161720|ref|YP_003400343.1|	-	0.00037	20.1	3.5	0.021	14.5	0.1	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Ribosomal_L37e	PF01907.19	gi|284161720|ref|YP_003400343.1|	-	0.00099	19.2	3.3	0.00099	19.2	3.3	1.4	1	1	0	1	1	1	1	Ribosomal	protein	L37e
Nudix_N_2	PF14803.6	gi|284161720|ref|YP_003400343.1|	-	0.0015	18.4	7.1	0.0058	16.5	6.3	2.2	2	1	0	2	2	2	1	Nudix	N-terminal
RNA_POL_M_15KD	PF02150.16	gi|284161720|ref|YP_003400343.1|	-	0.0023	17.8	1.3	0.0053	16.6	1.3	1.6	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
IBR	PF01485.21	gi|284161720|ref|YP_003400343.1|	-	0.0024	18.1	0.6	0.0029	17.8	0.6	1.2	1	0	0	1	1	1	1	IBR	domain,	a	half	RING-finger	domain
DZR	PF12773.7	gi|284161720|ref|YP_003400343.1|	-	0.0048	16.9	3.1	0.01	15.8	3.1	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
MqsA_antitoxin	PF15731.5	gi|284161720|ref|YP_003400343.1|	-	0.009	16.1	0.5	0.01	15.9	0.5	1.3	1	0	0	1	1	1	1	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
GFA	PF04828.14	gi|284161720|ref|YP_003400343.1|	-	0.017	15.4	3.0	0.055	13.8	1.1	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-NADH-PPase	PF09297.11	gi|284161720|ref|YP_003400343.1|	-	0.02	14.5	7.4	0.079	12.6	7.4	1.9	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|284161720|ref|YP_003400343.1|	-	0.022	14.2	5.4	0.22	11.0	5.4	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF1451	PF07295.11	gi|284161720|ref|YP_003400343.1|	-	0.032	14.3	2.4	0.031	14.3	2.4	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
Lar_restr_allev	PF14354.6	gi|284161720|ref|YP_003400343.1|	-	0.035	14.5	2.1	0.049	14.0	2.1	1.3	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zinc_ribbon_11	PF11682.8	gi|284161720|ref|YP_003400343.1|	-	0.047	13.7	0.3	0.047	13.7	0.3	1.5	1	1	0	1	1	1	0	Probable	zinc-ribbon
DUF2387	PF09526.10	gi|284161720|ref|YP_003400343.1|	-	0.083	13.1	1.4	0.083	13.1	1.4	1.9	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
ADK_lid	PF05191.14	gi|284161720|ref|YP_003400343.1|	-	0.14	12.1	3.5	3.4	7.7	1.0	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
NOB1_Zn_bind	PF08772.11	gi|284161720|ref|YP_003400343.1|	-	0.16	12.2	7.1	0.15	12.3	0.8	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HypA	PF01155.19	gi|284161720|ref|YP_003400343.1|	-	0.2	11.7	1.4	0.21	11.6	1.4	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_Tnp_IS1595	PF12760.7	gi|284161720|ref|YP_003400343.1|	-	0.22	11.5	6.6	0.52	10.3	5.4	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Rpr2	PF04032.16	gi|284161720|ref|YP_003400343.1|	-	0.23	11.8	4.0	0.53	10.6	0.2	2.0	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf_UBZ	PF18439.1	gi|284161720|ref|YP_003400343.1|	-	6.2	6.5	8.1	2	8.1	1.6	2.6	1	1	1	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
Peptidase_M22	PF00814.25	gi|284161721|ref|YP_003400344.1|	-	1.9e-91	306.5	0.0	2.4e-91	306.2	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
Carbam_trans_N	PF02543.15	gi|284161721|ref|YP_003400344.1|	-	0.082	12.5	0.0	0.2	11.3	0.0	1.8	2	0	0	2	2	2	0	Carbamoyltransferase	N-terminus
RNA_ligase	PF09414.10	gi|284161722|ref|YP_003400345.1|	-	7.3e-08	32.9	2.8	4.1e-07	30.4	0.6	2.1	1	1	1	2	2	2	2	RNA	ligase
ThiF	PF00899.21	gi|284161723|ref|YP_003400346.1|	-	5.5e-46	156.9	0.1	6.9e-46	156.6	0.1	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|284161723|ref|YP_003400346.1|	-	3.7e-05	24.0	3.2	0.00069	19.9	3.1	2.1	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
TrkA_N	PF02254.18	gi|284161723|ref|YP_003400346.1|	-	0.00028	21.1	3.0	0.0011	19.2	0.2	2.2	2	0	0	2	2	2	1	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.14	gi|284161723|ref|YP_003400346.1|	-	0.00081	19.0	2.7	0.0041	16.7	2.7	1.9	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|284161723|ref|YP_003400346.1|	-	0.0073	16.7	0.2	0.013	16.0	0.2	1.3	1	0	0	1	1	1	1	Putative	NAD(P)-binding
PTS_IIB	PF02302.17	gi|284161723|ref|YP_003400346.1|	-	0.012	16.3	0.1	0.024	15.3	0.1	1.4	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
PglD_N	PF17836.1	gi|284161723|ref|YP_003400346.1|	-	0.014	16.0	1.0	0.026	15.2	0.8	1.6	1	1	0	1	1	1	0	PglD	N-terminal	domain
IlvN	PF07991.12	gi|284161723|ref|YP_003400346.1|	-	0.023	14.3	0.2	5.2	6.6	0.0	2.9	2	1	0	3	3	3	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
DapB_N	PF01113.20	gi|284161723|ref|YP_003400346.1|	-	0.035	14.2	1.1	0.086	13.0	0.4	1.9	1	1	1	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.19	gi|284161723|ref|YP_003400346.1|	-	0.051	12.9	0.2	0.16	11.3	0.1	1.7	1	1	1	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|284161723|ref|YP_003400346.1|	-	0.11	12.2	0.1	0.2	11.3	0.1	1.5	1	1	1	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
Prok-JAB	PF14464.6	gi|284161725|ref|YP_003400348.1|	-	1.3e-06	28.1	0.0	1.9e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.21	gi|284161725|ref|YP_003400348.1|	-	0.018	15.0	0.0	0.13	12.2	0.0	2.1	1	1	0	1	1	1	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
HA1	PF18239.1	gi|284161726|ref|YP_003400349.1|	-	0.0057	16.5	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	Hemagglutinin	I
LapA_dom	PF06305.11	gi|284161728|ref|YP_003400351.1|	-	0.0081	16.0	0.0	0.0092	15.8	0.0	1.1	1	0	0	1	1	1	1	Lipopolysaccharide	assembly	protein	A	domain
NADH_dh_m_C1	PF15088.6	gi|284161730|ref|YP_003400353.1|	-	0.0028	17.2	0.1	0.032	13.8	0.1	2.2	2	0	0	2	2	2	1	NADH	dehydrogenase	[ubiquinone]	1	subunit	C1,	mitochondrial
PAP_PilO	PF06864.12	gi|284161730|ref|YP_003400353.1|	-	0.16	10.7	0.0	0.23	10.3	0.0	1.2	1	0	0	1	1	1	0	Pilin	accessory	protein	(PilO)
DUF3398	PF11878.8	gi|284161731|ref|YP_003400354.1|	-	0.11	12.9	0.4	0.21	12.0	0.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3398)
Sterol_MT_C	PF08498.10	gi|284161733|ref|YP_003400356.1|	-	0.099	13.0	0.0	0.16	12.3	0.0	1.3	1	0	0	1	1	1	0	Sterol	methyltransferase	C-terminal
Baculo_PEP_C	PF04513.12	gi|284161734|ref|YP_003400357.1|	-	0.0077	16.3	6.4	0.014	15.4	6.4	1.3	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DRIM	PF07539.12	gi|284161734|ref|YP_003400357.1|	-	0.012	13.9	0.5	0.012	13.9	0.5	1.5	2	0	0	2	2	2	0	Down-regulated	in	metastasis
TFIIE_alpha	PF02002.17	gi|284161735|ref|YP_003400358.1|	-	1.3e-05	25.0	0.1	1.3e-05	25.0	0.1	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR_2	PF12802.7	gi|284161735|ref|YP_003400358.1|	-	9.9e-05	22.1	0.0	0.00011	22.0	0.0	1.1	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|284161735|ref|YP_003400358.1|	-	0.00013	21.8	0.0	0.00014	21.7	0.0	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_47	PF16221.5	gi|284161735|ref|YP_003400358.1|	-	0.0037	16.8	0.1	0.0043	16.6	0.1	1.1	1	0	0	1	1	1	1	winged	helix-turn-helix
DUF2250	PF10007.9	gi|284161735|ref|YP_003400358.1|	-	0.0039	17.3	0.0	0.0041	17.2	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.6	gi|284161735|ref|YP_003400358.1|	-	0.0046	16.7	0.1	0.0052	16.5	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.21	gi|284161735|ref|YP_003400358.1|	-	0.005	16.5	0.0	0.0067	16.0	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Rrf2	PF02082.20	gi|284161735|ref|YP_003400358.1|	-	0.0051	17.1	0.0	0.0058	17.0	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
GerE	PF00196.19	gi|284161735|ref|YP_003400358.1|	-	0.011	15.2	0.0	0.015	14.8	0.0	1.3	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Fe_dep_repress	PF01325.19	gi|284161735|ref|YP_003400358.1|	-	0.013	15.7	0.0	0.014	15.5	0.0	1.2	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DprA_WH	PF17782.1	gi|284161735|ref|YP_003400358.1|	-	0.014	15.5	0.0	0.018	15.2	0.0	1.1	1	0	0	1	1	1	0	DprA	winged	helix	domain
HTH_28	PF13518.6	gi|284161735|ref|YP_003400358.1|	-	0.02	15.0	0.0	0.023	14.8	0.0	1.1	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161735|ref|YP_003400358.1|	-	0.028	14.0	0.1	0.034	13.7	0.1	1.1	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|284161735|ref|YP_003400358.1|	-	0.035	14.6	0.0	0.037	14.5	0.0	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_36	PF13730.6	gi|284161735|ref|YP_003400358.1|	-	0.035	14.1	0.0	0.051	13.5	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161735|ref|YP_003400358.1|	-	0.039	13.8	0.0	0.062	13.2	0.0	1.3	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Sigma70_r3	PF04539.16	gi|284161735|ref|YP_003400358.1|	-	0.054	13.6	0.0	0.068	13.3	0.0	1.2	1	0	0	1	1	1	0	Sigma-70	region	3
ArsR	PF09824.9	gi|284161735|ref|YP_003400358.1|	-	0.064	12.9	0.0	0.07	12.7	0.0	1.1	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
HTH_Crp_2	PF13545.6	gi|284161735|ref|YP_003400358.1|	-	0.066	13.2	0.0	0.076	13.0	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|284161735|ref|YP_003400358.1|	-	0.066	13.1	0.0	0.081	12.9	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_29	PF13551.6	gi|284161735|ref|YP_003400358.1|	-	0.068	13.2	0.0	0.089	12.8	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
PseudoU_synth_1	PF01416.20	gi|284161735|ref|YP_003400358.1|	-	0.094	13.2	0.0	0.13	12.7	0.0	1.1	1	0	0	1	1	1	0	tRNA	pseudouridine	synthase
FaeA	PF04703.12	gi|284161735|ref|YP_003400358.1|	-	0.11	12.8	0.0	0.14	12.5	0.0	1.1	1	0	0	1	1	1	0	FaeA-like	protein
Pyr_redox_2	PF07992.14	gi|284161736|ref|YP_003400359.1|	-	1.5e-62	211.5	0.6	2.2e-62	211.0	0.6	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284161736|ref|YP_003400359.1|	-	1.1e-25	90.0	10.6	4e-21	75.4	1.5	4.1	4	0	0	4	4	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|284161736|ref|YP_003400359.1|	-	3.7e-21	75.4	0.1	1.7e-20	73.3	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
DAO	PF01266.24	gi|284161736|ref|YP_003400359.1|	-	8.3e-13	48.6	4.4	0.0021	17.7	0.2	4.3	4	0	0	4	4	4	4	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|284161736|ref|YP_003400359.1|	-	1.8e-11	43.9	1.3	1.1e-06	28.1	0.2	3.4	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Rhodanese	PF00581.20	gi|284161736|ref|YP_003400359.1|	-	6.8e-11	42.6	0.2	2.3e-10	40.9	0.0	1.9	2	0	0	2	2	1	1	Rhodanese-like	domain
HI0933_like	PF03486.14	gi|284161736|ref|YP_003400359.1|	-	3.7e-10	39.1	2.4	0.01	14.6	0.1	4.1	4	0	0	4	4	4	3	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|284161736|ref|YP_003400359.1|	-	3.5e-09	36.8	1.3	0.0018	18.5	0.2	2.9	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|284161736|ref|YP_003400359.1|	-	1.2e-07	31.2	2.9	0.0051	15.9	0.1	4.0	5	0	0	5	5	5	2	FAD	binding	domain
NAD_binding_9	PF13454.6	gi|284161736|ref|YP_003400359.1|	-	1.8e-06	28.1	2.2	0.78	9.7	0.0	4.2	4	0	0	4	4	4	2	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|284161736|ref|YP_003400359.1|	-	8.9e-06	25.0	4.1	0.0092	15.1	0.1	3.2	2	1	1	3	3	3	2	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|284161736|ref|YP_003400359.1|	-	9e-06	24.8	1.3	0.28	10.0	0.0	3.4	3	0	0	3	3	3	2	Tryptophan	halogenase
AlaDh_PNT_C	PF01262.21	gi|284161736|ref|YP_003400359.1|	-	1.7e-05	24.2	1.4	0.047	13.0	0.2	2.6	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
GIDA	PF01134.22	gi|284161736|ref|YP_003400359.1|	-	0.00044	19.4	11.3	0.49	9.4	0.6	4.0	2	2	1	4	4	4	2	Glucose	inhibited	division	protein	A
TrkA_N	PF02254.18	gi|284161736|ref|YP_003400359.1|	-	0.00047	20.4	2.8	0.13	12.5	0.1	3.4	4	0	0	4	4	3	1	TrkA-N	domain
FAD_oxidored	PF12831.7	gi|284161736|ref|YP_003400359.1|	-	0.0015	18.0	6.2	0.17	11.2	0.1	3.5	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|284161736|ref|YP_003400359.1|	-	0.0021	17.4	4.9	0.41	9.8	0.1	3.1	2	1	1	3	3	3	2	Thi4	family
NAD_binding_7	PF13241.6	gi|284161736|ref|YP_003400359.1|	-	0.0056	17.1	1.2	1.6	9.2	0.1	3.0	2	2	0	2	2	2	1	Putative	NAD(P)-binding
Amino_oxidase	PF01593.24	gi|284161736|ref|YP_003400359.1|	-	0.0065	15.8	0.4	1	8.5	0.0	2.3	1	1	1	2	2	2	1	Flavin	containing	amine	oxidoreductase
FAD_binding_3	PF01494.19	gi|284161736|ref|YP_003400359.1|	-	0.019	14.2	1.2	0.23	10.7	0.1	2.6	3	0	0	3	3	3	0	FAD	binding	domain
DUF1188	PF06690.11	gi|284161736|ref|YP_003400359.1|	-	0.02	14.5	0.0	0.23	11.0	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1188)
Sacchrp_dh_NADP	PF03435.18	gi|284161736|ref|YP_003400359.1|	-	0.025	14.8	0.2	7.7	6.8	0.1	2.6	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
GMC_oxred_N	PF00732.19	gi|284161736|ref|YP_003400359.1|	-	0.029	13.8	1.4	5.8	6.2	0.0	3.6	4	0	0	4	4	4	0	GMC	oxidoreductase
3HCDH_N	PF02737.18	gi|284161736|ref|YP_003400359.1|	-	0.031	14.2	0.9	0.13	12.2	0.1	2.3	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|284161736|ref|YP_003400359.1|	-	0.1	11.9	0.3	3.1	7.1	0.1	2.7	3	0	0	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|284161736|ref|YP_003400359.1|	-	0.26	10.8	1.7	1.9	8.0	0.7	2.4	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Ldh_1_N	PF00056.23	gi|284161737|ref|YP_003400360.1|	-	5.1e-40	136.8	0.2	9.1e-40	136.0	0.2	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.18	gi|284161737|ref|YP_003400360.1|	-	3.7e-22	79.0	0.0	7.3e-22	78.1	0.0	1.5	2	0	0	2	2	2	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|284161737|ref|YP_003400360.1|	-	0.26	10.8	1.9	1.3	8.6	1.9	2.0	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FIST	PF08495.10	gi|284161738|ref|YP_003400361.1|	-	3.2e-19	69.6	0.0	5.7e-19	68.8	0.0	1.4	1	0	0	1	1	1	1	FIST	N	domain
FIST_C	PF10442.9	gi|284161738|ref|YP_003400361.1|	-	2.7e-16	59.7	0.1	4.3e-16	59.1	0.1	1.3	1	0	0	1	1	1	1	FIST	C	domain
HATPase_c	PF02518.26	gi|284161739|ref|YP_003400362.1|	-	1.4e-23	83.5	0.0	4.7e-23	81.8	0.0	1.9	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.7	gi|284161739|ref|YP_003400362.1|	-	1.6e-17	63.7	0.3	9.5e-13	48.3	0.0	3.2	3	1	0	3	3	3	2	PAS	domain
PAS	PF00989.25	gi|284161739|ref|YP_003400362.1|	-	2.8e-16	59.5	0.0	4.7e-09	36.2	0.0	2.6	2	0	0	2	2	2	2	PAS	fold
PAS_8	PF13188.7	gi|284161739|ref|YP_003400362.1|	-	3.3e-15	55.7	0.0	1.6e-07	31.2	0.0	2.7	2	0	0	2	2	2	2	PAS	domain
PAS_4	PF08448.10	gi|284161739|ref|YP_003400362.1|	-	8.7e-10	38.8	0.1	0.00018	21.8	0.0	2.8	3	0	0	3	3	3	2	PAS	fold
PAS_3	PF08447.12	gi|284161739|ref|YP_003400362.1|	-	1e-08	35.3	1.1	7.1e-08	32.6	0.1	2.7	3	0	0	3	3	3	1	PAS	fold
HATPase_c_2	PF13581.6	gi|284161739|ref|YP_003400362.1|	-	5e-06	26.5	0.1	1.4e-05	25.1	0.1	1.8	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
SPOB_a	PF14689.6	gi|284161739|ref|YP_003400362.1|	-	1.7e-05	24.4	0.6	6.5e-05	22.6	0.2	2.2	2	0	0	2	2	2	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
PAS_12	PF18095.1	gi|284161739|ref|YP_003400362.1|	-	0.00017	21.2	0.1	0.001	18.7	0.0	2.1	2	0	0	2	2	2	1	UPF0242	C-terminal	PAS-like	domain
HisKA	PF00512.25	gi|284161739|ref|YP_003400362.1|	-	0.014	15.4	0.3	0.071	13.2	0.1	2.4	2	1	0	2	2	2	0	His	Kinase	A	(phospho-acceptor)	domain
DUF4363	PF14276.6	gi|284161739|ref|YP_003400362.1|	-	0.057	13.5	0.8	1.7	8.8	0.2	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4363)
HATPase_c_5	PF14501.6	gi|284161739|ref|YP_003400362.1|	-	0.12	12.3	0.0	0.26	11.2	0.0	1.5	1	0	0	1	1	1	0	GHKL	domain
HATPase_c_3	PF13589.6	gi|284161739|ref|YP_003400362.1|	-	0.16	11.8	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Fer4	PF00037.27	gi|284161740|ref|YP_003400363.1|	-	1.6e-07	30.8	21.0	0.0003	20.5	8.4	3.1	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284161740|ref|YP_003400363.1|	-	7.6e-07	28.9	18.9	6.1e-05	22.9	1.6	2.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284161740|ref|YP_003400363.1|	-	2.7e-05	24.2	15.4	5e-05	23.3	15.5	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161740|ref|YP_003400363.1|	-	0.0017	18.5	19.3	0.0046	17.1	18.4	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161740|ref|YP_003400363.1|	-	0.0036	17.4	17.0	0.0081	16.3	17.0	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284161740|ref|YP_003400363.1|	-	0.0038	17.2	20.2	0.13	12.4	3.8	2.7	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161740|ref|YP_003400363.1|	-	0.031	14.9	20.2	0.85	10.3	4.1	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284161740|ref|YP_003400363.1|	-	0.047	14.2	16.1	0.14	12.8	2.3	2.1	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284161740|ref|YP_003400363.1|	-	0.16	12.7	10.8	0.18	12.6	0.8	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|284161740|ref|YP_003400363.1|	-	8.4	7.6	20.8	9	7.5	10.4	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|284161740|ref|YP_003400363.1|	-	10	6.9	24.0	5.7	7.7	7.5	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
HhH-GPD	PF00730.25	gi|284161742|ref|YP_003400365.1|	-	0.0059	17.0	0.0	0.0097	16.3	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HTH_AsnC-type	PF13404.6	gi|284161743|ref|YP_003400366.1|	-	5.3e-15	55.0	1.1	1.8e-14	53.2	0.4	2.0	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161743|ref|YP_003400366.1|	-	1.8e-14	53.0	0.6	3.1e-14	52.3	0.6	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.21	gi|284161743|ref|YP_003400366.1|	-	1.9e-14	53.4	0.1	3.5e-14	52.5	0.1	1.4	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_11	PF08279.12	gi|284161743|ref|YP_003400366.1|	-	3e-08	33.5	1.2	4.3e-08	33.0	0.4	1.7	2	0	0	2	2	2	1	HTH	domain
HTH_Mga	PF08280.11	gi|284161743|ref|YP_003400366.1|	-	2.9e-05	24.0	0.0	5.2e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_23	PF13384.6	gi|284161743|ref|YP_003400366.1|	-	7.8e-05	22.4	0.6	0.00017	21.3	0.1	1.8	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_DeoR	PF08220.12	gi|284161743|ref|YP_003400366.1|	-	0.00068	19.3	0.1	0.0012	18.6	0.1	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_28	PF13518.6	gi|284161743|ref|YP_003400366.1|	-	0.0014	18.7	0.1	0.0026	17.8	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|284161743|ref|YP_003400366.1|	-	0.0091	16.2	0.1	0.017	15.3	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GntR	PF00392.21	gi|284161743|ref|YP_003400366.1|	-	0.011	15.4	0.1	0.019	14.6	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.6	gi|284161743|ref|YP_003400366.1|	-	0.015	15.2	0.0	0.033	14.2	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
ACT_4	PF13291.6	gi|284161743|ref|YP_003400366.1|	-	0.021	15.4	0.4	0.041	14.5	0.4	1.7	1	1	0	1	1	1	0	ACT	domain
Sigma70_r4_2	PF08281.12	gi|284161743|ref|YP_003400366.1|	-	0.022	14.4	0.1	0.054	13.2	0.1	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
TFIIE_alpha	PF02002.17	gi|284161743|ref|YP_003400366.1|	-	0.022	14.6	0.8	0.035	14.0	0.2	1.6	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_CodY	PF08222.11	gi|284161743|ref|YP_003400366.1|	-	0.023	14.2	0.2	0.038	13.5	0.2	1.4	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
TrmB	PF01978.19	gi|284161743|ref|YP_003400366.1|	-	0.025	14.5	0.2	0.051	13.5	0.2	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284161743|ref|YP_003400366.1|	-	0.026	14.4	0.1	0.043	13.7	0.1	1.3	1	0	0	1	1	1	0	MarR	family
HTH_34	PF13601.6	gi|284161743|ref|YP_003400366.1|	-	0.028	14.6	0.0	0.045	13.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_20	PF12840.7	gi|284161743|ref|YP_003400366.1|	-	0.039	14.0	0.0	0.062	13.4	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.19	gi|284161743|ref|YP_003400366.1|	-	0.04	13.7	0.2	0.069	12.9	0.2	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_1	PF00126.27	gi|284161743|ref|YP_003400366.1|	-	0.065	13.2	0.1	0.14	12.2	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
ACT_5	PF13710.6	gi|284161743|ref|YP_003400366.1|	-	0.067	13.1	0.1	0.13	12.2	0.1	1.5	1	0	0	1	1	1	0	ACT	domain
HTH_30	PF13556.6	gi|284161743|ref|YP_003400366.1|	-	0.084	12.7	0.3	0.81	9.5	0.0	2.5	3	0	0	3	3	3	0	PucR	C-terminal	helix-turn-helix	domain
AhpC-TSA	PF00578.21	gi|284161744|ref|YP_003400367.1|	-	6.2e-32	110.1	0.0	7.9e-32	109.8	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|284161744|ref|YP_003400367.1|	-	1.1e-13	51.1	0.0	1.5e-13	50.7	0.0	1.1	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.9	gi|284161744|ref|YP_003400367.1|	-	7.6e-13	48.1	0.1	1.4e-12	47.3	0.1	1.4	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
AhpC-TSA_2	PF13911.6	gi|284161744|ref|YP_003400367.1|	-	0.026	14.7	0.0	0.05	13.7	0.0	1.4	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
Rubrerythrin	PF02915.17	gi|284161745|ref|YP_003400368.1|	-	4.6e-24	85.4	10.9	5.7e-24	85.1	10.9	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|284161745|ref|YP_003400368.1|	-	7.7e-12	45.3	9.3	1.3e-10	41.3	3.3	1.9	1	1	1	2	2	2	2	Ferritin-like	domain
COQ7	PF03232.13	gi|284161745|ref|YP_003400368.1|	-	7.8e-05	22.5	1.0	0.33	10.7	0.0	2.1	2	0	0	2	2	2	2	Ubiquinone	biosynthesis	protein	COQ7
HypA	PF01155.19	gi|284161745|ref|YP_003400368.1|	-	0.0012	18.8	0.1	0.0023	17.9	0.1	1.4	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
FA_desaturase_2	PF03405.14	gi|284161745|ref|YP_003400368.1|	-	0.011	14.7	0.6	0.22	10.3	0.1	2.0	2	0	0	2	2	2	0	Fatty	acid	desaturase
zf-NADH-PPase	PF09297.11	gi|284161745|ref|YP_003400368.1|	-	0.015	14.9	1.4	0.087	12.5	0.3	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-UBP	PF02148.19	gi|284161745|ref|YP_003400368.1|	-	0.019	15.3	0.3	0.041	14.2	0.3	1.5	1	0	0	1	1	1	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
TRPM_tetra	PF16519.5	gi|284161745|ref|YP_003400368.1|	-	0.077	13.1	1.9	0.44	10.7	0.8	2.7	2	1	1	3	3	3	0	Tetramerisation	domain	of	TRPM
zf-C2HC5	PF06221.13	gi|284161745|ref|YP_003400368.1|	-	0.13	12.2	0.1	0.22	11.6	0.1	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Zn_ribbon_SprT	PF17283.2	gi|284161745|ref|YP_003400368.1|	-	0.18	11.7	1.0	2	8.4	0.0	2.2	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
zinc_ribbon_11	PF11682.8	gi|284161745|ref|YP_003400368.1|	-	0.26	11.3	2.4	0.57	10.2	2.0	1.8	1	1	0	1	1	1	0	Probable	zinc-ribbon
Zn_Tnp_IS1595	PF12760.7	gi|284161745|ref|YP_003400368.1|	-	0.3	11.1	0.3	0.3	11.1	0.3	1.8	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|284161745|ref|YP_003400368.1|	-	0.31	10.8	2.9	0.83	9.5	2.9	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
Rubrerythrin	PF02915.17	gi|284161746|ref|YP_003400369.1|	-	1.6e-35	122.5	10.5	1.9e-35	122.2	10.5	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|284161746|ref|YP_003400369.1|	-	8e-12	45.3	3.5	9.4e-12	45.1	3.5	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
HypA	PF01155.19	gi|284161746|ref|YP_003400369.1|	-	0.0057	16.7	0.2	0.016	15.2	0.1	1.8	2	0	0	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-UBP	PF02148.19	gi|284161746|ref|YP_003400369.1|	-	0.0062	16.8	0.2	0.014	15.7	0.2	1.7	1	0	0	1	1	1	1	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
TFIIS_C	PF01096.18	gi|284161746|ref|YP_003400369.1|	-	0.01	15.7	2.3	0.072	12.9	0.1	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C2HC5	PF06221.13	gi|284161746|ref|YP_003400369.1|	-	0.012	15.6	0.1	0.019	14.9	0.1	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Nudix_N_2	PF14803.6	gi|284161746|ref|YP_003400369.1|	-	0.037	13.9	1.3	6.9	6.7	0.1	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
A2L_zn_ribbon	PF08792.10	gi|284161746|ref|YP_003400369.1|	-	0.052	13.3	0.1	6	6.7	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
NBD94	PF16830.5	gi|284161746|ref|YP_003400369.1|	-	0.06	13.7	0.1	0.16	12.4	0.1	1.7	1	0	0	1	1	1	0	Nucleotide-Binding	Domain	94	of	RH
Zn-ribbon_8	PF09723.10	gi|284161746|ref|YP_003400369.1|	-	0.078	13.1	2.2	0.21	11.8	2.2	1.7	1	0	0	1	1	1	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|284161746|ref|YP_003400369.1|	-	0.089	12.3	1.7	5	6.7	0.1	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
FA_desaturase_2	PF03405.14	gi|284161746|ref|YP_003400369.1|	-	0.18	10.6	2.2	4.1	6.2	1.4	2.1	1	1	1	2	2	2	0	Fatty	acid	desaturase
zinc_ribbon_10	PF10058.9	gi|284161746|ref|YP_003400369.1|	-	0.48	10.2	3.0	0.98	9.2	0.1	2.4	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zinc_ribbon_2	PF13240.6	gi|284161746|ref|YP_003400369.1|	-	0.78	9.5	5.2	1.5	8.7	5.2	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Ferritin_2	PF13668.6	gi|284161746|ref|YP_003400369.1|	-	2	8.6	6.1	2.1	8.5	2.8	2.0	1	1	1	2	2	2	0	Ferritin-like	domain
zf-ribbon_3	PF13248.6	gi|284161746|ref|YP_003400369.1|	-	4.2	6.9	5.8	1	8.8	1.3	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|284161746|ref|YP_003400369.1|	-	7.8	6.3	7.0	11	5.9	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Rubredoxin	PF00301.20	gi|284161747|ref|YP_003400370.1|	-	1.6e-20	72.8	10.3	1.8e-20	72.6	10.3	1.0	1	0	0	1	1	1	1	Rubredoxin
Vps36-NZF-N	PF16988.5	gi|284161747|ref|YP_003400370.1|	-	0.0089	15.4	2.9	0.11	11.9	0.1	2.1	2	0	0	2	2	2	2	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
DUF4379	PF14311.6	gi|284161747|ref|YP_003400370.1|	-	0.02	15.3	7.4	0.044	14.2	5.5	2.0	1	1	1	2	2	2	0	Probable	Zinc-ribbon	domain
zf-Sec23_Sec24	PF04810.15	gi|284161747|ref|YP_003400370.1|	-	0.18	11.9	6.8	2.2	8.4	0.9	2.4	2	1	0	2	2	2	0	Sec23/Sec24	zinc	finger
ADK_lid	PF05191.14	gi|284161747|ref|YP_003400370.1|	-	1.5	8.8	7.9	7.2	6.7	7.9	1.9	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
Desulfoferrodox	PF01880.18	gi|284161748|ref|YP_003400371.1|	-	2.3e-28	98.6	0.2	2.8e-28	98.3	0.2	1.1	1	0	0	1	1	1	1	Desulfoferrodoxin
SoxY	PF13501.6	gi|284161748|ref|YP_003400371.1|	-	1.8e-09	37.8	0.0	2.3e-09	37.4	0.0	1.2	1	0	0	1	1	1	1	Sulfur	oxidation	protein	SoxY
Lactamase_B	PF00753.27	gi|284161749|ref|YP_003400372.1|	-	2.2e-08	34.3	0.0	3.8e-08	33.6	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Flavodoxin_1	PF00258.25	gi|284161749|ref|YP_003400372.1|	-	7.1e-08	32.8	0.0	1.1e-07	32.2	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin
Lactamase_B_2	PF12706.7	gi|284161749|ref|YP_003400372.1|	-	1e-06	28.4	0.0	2.6e-06	27.1	0.0	1.7	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Flavodoxin_5	PF12724.7	gi|284161749|ref|YP_003400372.1|	-	0.04	14.1	0.0	0.064	13.5	0.0	1.3	1	0	0	1	1	1	0	Flavodoxin	domain
DUF4923	PF16270.5	gi|284161750|ref|YP_003400373.1|	-	0.031	14.1	0.0	0.036	13.9	0.0	1.1	1	0	0	1	1	1	0	Lipocalin-like	domain	(DUF4923)
DUF4473	PF14747.6	gi|284161750|ref|YP_003400373.1|	-	0.033	14.7	0.9	0.037	14.6	0.1	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4473)
KH_4	PF13083.6	gi|284161750|ref|YP_003400373.1|	-	0.035	14.0	0.9	1.7	8.6	0.1	2.1	1	1	1	2	2	2	0	KH	domain
G2F	PF07474.12	gi|284161750|ref|YP_003400373.1|	-	0.037	13.8	0.0	0.057	13.2	0.0	1.3	1	1	0	1	1	1	0	G2F	domain
TrmB	PF01978.19	gi|284161751|ref|YP_003400374.1|	-	1.4e-17	63.3	0.2	2.1e-17	62.8	0.2	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|284161751|ref|YP_003400374.1|	-	6.7e-07	29.1	0.1	0.00021	21.1	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.6	gi|284161751|ref|YP_003400374.1|	-	9.1e-06	25.5	0.0	1.9e-05	24.5	0.0	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|284161751|ref|YP_003400374.1|	-	3e-05	23.9	0.2	7.1e-05	22.7	0.2	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_29	PF13551.6	gi|284161751|ref|YP_003400374.1|	-	0.00012	22.0	0.0	0.00022	21.2	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
MarR	PF01047.22	gi|284161751|ref|YP_003400374.1|	-	0.00028	20.7	0.1	0.00092	19.1	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_IclR	PF09339.10	gi|284161751|ref|YP_003400374.1|	-	0.00034	20.4	0.0	0.00061	19.5	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161751|ref|YP_003400374.1|	-	0.00037	20.0	0.0	0.0009	18.8	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.19	gi|284161751|ref|YP_003400374.1|	-	0.00041	20.5	0.1	0.00086	19.5	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TFIIE_alpha	PF02002.17	gi|284161751|ref|YP_003400374.1|	-	0.00061	19.6	0.3	0.00077	19.3	0.3	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
Penicillinase_R	PF03965.16	gi|284161751|ref|YP_003400374.1|	-	0.00069	20.0	0.0	0.00098	19.5	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
FUR	PF01475.19	gi|284161751|ref|YP_003400374.1|	-	0.008	16.3	0.0	0.01	16.0	0.0	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
MarR_2	PF12802.7	gi|284161751|ref|YP_003400374.1|	-	0.0095	15.8	0.0	0.014	15.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Trm5_N	PF18093.1	gi|284161751|ref|YP_003400374.1|	-	0.01	15.7	0.1	0.025	14.5	0.1	1.7	1	0	0	1	1	1	0	tRNA	methyltransferase	5	N-terminal	domain
GntR	PF00392.21	gi|284161751|ref|YP_003400374.1|	-	0.013	15.1	0.2	0.034	13.8	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_38	PF13936.6	gi|284161751|ref|YP_003400374.1|	-	0.014	15.1	0.0	0.046	13.5	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
Replic_Relax	PF13814.6	gi|284161751|ref|YP_003400374.1|	-	0.014	15.5	0.0	0.018	15.1	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
HTH_11	PF08279.12	gi|284161751|ref|YP_003400374.1|	-	0.025	14.5	0.0	0.055	13.4	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_23	PF13384.6	gi|284161751|ref|YP_003400374.1|	-	0.025	14.3	0.0	0.046	13.5	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_Crp_2	PF13545.6	gi|284161751|ref|YP_003400374.1|	-	0.027	14.4	0.0	0.052	13.5	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
IL6	PF00489.17	gi|284161751|ref|YP_003400374.1|	-	0.038	13.6	0.1	0.054	13.1	0.1	1.3	1	0	0	1	1	1	0	Interleukin-6/G-CSF/MGF	family
HTH_28	PF13518.6	gi|284161751|ref|YP_003400374.1|	-	0.042	14.0	0.0	0.078	13.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Imm9	PF15587.6	gi|284161751|ref|YP_003400374.1|	-	0.046	13.4	0.2	9.4	5.9	0.0	2.1	2	0	0	2	2	2	0	Immunity	protein	9
Rrf2	PF02082.20	gi|284161751|ref|YP_003400374.1|	-	0.071	13.5	0.0	0.12	12.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_20	PF12840.7	gi|284161751|ref|YP_003400374.1|	-	0.074	13.1	0.1	0.16	12.1	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.12	gi|284161751|ref|YP_003400374.1|	-	0.097	12.4	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Cytochrom_C_asm	PF01578.20	gi|284161752|ref|YP_003400375.1|	-	5.1e-16	59.1	18.6	5.1e-16	59.1	18.6	4.4	2	1	0	3	3	3	1	Cytochrome	C	assembly	protein
CcmF_C	PF16327.5	gi|284161752|ref|YP_003400375.1|	-	0.16	11.2	0.1	0.16	11.2	0.1	2.8	3	0	0	3	3	3	0	Cytochrome	c-type	biogenesis	protein	CcmF	C-terminal
Cytochrom_C_asm	PF01578.20	gi|284161753|ref|YP_003400376.1|	-	1.5e-20	73.9	12.9	1.5e-20	73.9	12.9	1.5	2	0	0	2	2	2	1	Cytochrome	C	assembly	protein
AI-2E_transport	PF01594.16	gi|284161753|ref|YP_003400376.1|	-	0.0032	16.7	0.1	0.0032	16.7	0.1	2.5	2	1	1	3	3	3	1	AI-2E	family	transporter
DUF3464	PF11947.8	gi|284161753|ref|YP_003400376.1|	-	0.21	11.3	2.7	2.4	7.9	0.3	2.4	2	0	0	2	2	2	0	Photosynthesis	affected	mutant	68
CcmE	PF03100.15	gi|284161755|ref|YP_003400378.1|	-	1.9e-08	34.3	0.1	2.5e-08	34.0	0.1	1.1	1	0	0	1	1	1	1	CcmE
ABC_tran	PF00005.27	gi|284161756|ref|YP_003400379.1|	-	2.8e-28	99.1	0.0	3.4e-28	98.9	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161756|ref|YP_003400379.1|	-	5.5e-09	36.3	0.4	0.0018	18.2	0.2	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|284161756|ref|YP_003400379.1|	-	5e-06	27.2	0.9	7.2e-06	26.6	0.7	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|284161756|ref|YP_003400379.1|	-	0.00041	20.5	0.0	0.0012	19.1	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|284161756|ref|YP_003400379.1|	-	0.0006	19.5	0.0	0.00094	18.9	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|284161756|ref|YP_003400379.1|	-	0.00068	19.1	0.3	0.25	10.7	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
DUF87	PF01935.17	gi|284161756|ref|YP_003400379.1|	-	0.0039	17.3	0.6	0.039	14.0	0.2	2.0	1	1	1	2	2	2	1	Helicase	HerA,	central	domain
AAA_15	PF13175.6	gi|284161756|ref|YP_003400379.1|	-	0.011	15.5	0.3	0.015	15.1	0.2	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.12	gi|284161756|ref|YP_003400379.1|	-	0.017	15.1	0.0	0.03	14.2	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.6	gi|284161756|ref|YP_003400379.1|	-	0.017	14.9	0.0	0.055	13.2	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|284161756|ref|YP_003400379.1|	-	0.02	15.2	0.2	0.073	13.3	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
DLIC	PF05783.11	gi|284161756|ref|YP_003400379.1|	-	0.035	12.9	0.0	0.043	12.6	0.0	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
SbcCD_C	PF13558.6	gi|284161756|ref|YP_003400379.1|	-	0.038	14.2	0.0	0.056	13.7	0.0	1.4	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.6	gi|284161756|ref|YP_003400379.1|	-	0.04	12.6	0.4	1.1	7.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|284161756|ref|YP_003400379.1|	-	0.049	14.0	0.0	0.067	13.6	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.29	gi|284161756|ref|YP_003400379.1|	-	0.072	13.5	0.1	0.25	11.8	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|284161756|ref|YP_003400379.1|	-	0.079	12.9	0.1	0.1	12.5	0.1	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
T2SSE	PF00437.20	gi|284161756|ref|YP_003400379.1|	-	0.09	11.8	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.6	gi|284161756|ref|YP_003400379.1|	-	0.18	11.5	0.1	0.24	11.1	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
DUF3584	PF12128.8	gi|284161756|ref|YP_003400379.1|	-	0.26	8.7	0.3	0.34	8.4	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
ABC2_membrane_5	PF13346.6	gi|284161757|ref|YP_003400380.1|	-	0.00058	19.5	27.9	0.00071	19.2	27.9	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.13	gi|284161757|ref|YP_003400380.1|	-	0.001	18.7	14.3	0.0014	18.1	14.3	1.3	1	0	0	1	1	1	1	CcmB	protein
ABC2_membrane_4	PF12730.7	gi|284161757|ref|YP_003400380.1|	-	0.0013	18.8	25.9	0.0048	16.9	25.9	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|284161757|ref|YP_003400380.1|	-	0.0014	17.8	30.5	0.0017	17.5	30.5	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
DUF2070	PF09843.9	gi|284161757|ref|YP_003400380.1|	-	6.3	5.0	30.2	7.7	4.7	30.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
S4	PF01479.25	gi|284161758|ref|YP_003400381.1|	-	4.9e-13	48.6	0.3	9.6e-13	47.6	0.3	1.5	1	0	0	1	1	1	1	S4	domain
FtsJ	PF01728.19	gi|284161758|ref|YP_003400381.1|	-	1.3e-07	31.9	0.0	1.8e-07	31.4	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_25	PF13649.6	gi|284161758|ref|YP_003400381.1|	-	7.2e-07	29.8	0.0	1.3e-06	29.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284161758|ref|YP_003400381.1|	-	1e-06	29.3	0.0	2.2e-06	28.2	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|284161758|ref|YP_003400381.1|	-	2.4e-06	26.8	0.0	2.8e-06	26.6	0.0	1.1	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_31	PF13847.6	gi|284161758|ref|YP_003400381.1|	-	2.6e-05	24.1	0.0	3.8e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284161758|ref|YP_003400381.1|	-	0.0031	18.2	0.0	0.0058	17.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|284161758|ref|YP_003400381.1|	-	0.0086	17.1	0.0	0.016	16.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.12	gi|284161758|ref|YP_003400381.1|	-	0.031	13.4	0.0	0.042	12.9	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
Methyltransf_23	PF13489.6	gi|284161758|ref|YP_003400381.1|	-	0.032	14.1	0.0	0.072	12.9	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.12	gi|284161758|ref|YP_003400381.1|	-	0.13	11.9	0.0	0.22	11.1	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
PK_C	PF02887.16	gi|284161759|ref|YP_003400382.1|	-	3.2e-13	49.9	0.1	4.9e-13	49.3	0.1	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
AP_endonuc_2	PF01261.24	gi|284161759|ref|YP_003400382.1|	-	0.039	13.4	0.0	0.094	12.1	0.0	1.8	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
DUF131	PF01998.17	gi|284161760|ref|YP_003400383.1|	-	1.9e-18	65.9	0.5	1.9e-18	65.9	0.5	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
SLATT_5	PF18160.1	gi|284161760|ref|YP_003400383.1|	-	0.0031	16.9	3.6	0.047	13.0	0.0	2.0	1	1	1	2	2	2	1	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
DUF898	PF05987.13	gi|284161760|ref|YP_003400383.1|	-	0.004	16.3	0.2	0.0044	16.1	0.2	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF898)
DUF2207	PF09972.9	gi|284161760|ref|YP_003400383.1|	-	0.01	14.6	0.7	0.015	14.1	0.7	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF3040	PF11239.8	gi|284161760|ref|YP_003400383.1|	-	0.012	15.9	1.9	0.56	10.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
TssO	PF17561.2	gi|284161760|ref|YP_003400383.1|	-	0.026	14.6	0.3	0.026	14.6	0.3	1.9	2	0	0	2	2	2	0	Type	VI	secretion	system,	TssO
DHHC	PF01529.20	gi|284161760|ref|YP_003400383.1|	-	0.044	13.9	0.3	0.057	13.5	0.3	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
TMEM51	PF15345.6	gi|284161760|ref|YP_003400383.1|	-	0.28	11.0	1.1	1.1	9.1	0.0	1.9	2	0	0	2	2	2	0	Transmembrane	protein	51
COPI_assoc	PF08507.10	gi|284161760|ref|YP_003400383.1|	-	0.36	10.9	7.2	0.91	9.6	0.1	2.0	2	0	0	2	2	2	0	COPI	associated	protein
O-antigen_lig	PF13425.6	gi|284161760|ref|YP_003400383.1|	-	0.57	8.9	7.5	0.67	8.7	0.0	2.0	1	1	1	2	2	2	0	O-antigen	ligase	like	membrane	protein
DUF2976	PF11190.8	gi|284161760|ref|YP_003400383.1|	-	7.3	6.5	8.7	0.3	10.9	0.6	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
DUF131	PF01998.17	gi|284161761|ref|YP_003400384.1|	-	8.3e-15	54.2	8.3	8.3e-15	54.2	8.3	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF131
MoeA_N	PF03453.17	gi|284161762|ref|YP_003400385.1|	-	1e-43	148.8	1.1	1.9e-43	147.9	0.5	1.7	2	0	0	2	2	2	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|284161762|ref|YP_003400385.1|	-	3.5e-28	98.1	0.1	7.3e-28	97.0	0.1	1.6	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|284161762|ref|YP_003400385.1|	-	2.7e-18	65.9	0.1	2.7e-18	65.9	0.1	3.4	5	0	0	5	5	5	1	MoeA	C-terminal	region	(domain	IV)
YbjQ_1	PF01906.17	gi|284161762|ref|YP_003400385.1|	-	0.072	13.7	0.0	0.17	12.6	0.0	1.6	1	0	0	1	1	1	0	Putative	heavy-metal-binding
DUF1743	PF08489.11	gi|284161763|ref|YP_003400386.1|	-	6.5e-41	139.0	0.0	1.5e-40	137.9	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.25	gi|284161763|ref|YP_003400386.1|	-	2.7e-06	27.3	0.1	5.9e-06	26.2	0.1	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DpnI	PF06044.12	gi|284161763|ref|YP_003400386.1|	-	0.0021	17.7	0.1	0.0035	17.0	0.1	1.3	1	0	0	1	1	1	1	Dam-replacing	family
Zn_Tnp_IS1595	PF12760.7	gi|284161763|ref|YP_003400386.1|	-	0.0029	17.5	1.6	0.0063	16.5	1.6	1.5	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
tRNA_anti_2	PF13742.6	gi|284161763|ref|YP_003400386.1|	-	0.013	15.7	0.0	0.032	14.4	0.0	1.6	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161763|ref|YP_003400386.1|	-	0.014	15.3	1.9	0.031	14.2	1.9	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Vps39_2	PF10367.9	gi|284161763|ref|YP_003400386.1|	-	0.072	13.5	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
YdjO	PF14169.6	gi|284161763|ref|YP_003400386.1|	-	0.082	12.6	0.0	0.2	11.4	0.0	1.6	1	0	0	1	1	1	0	Cold-inducible	protein	YdjO
HypA	PF01155.19	gi|284161763|ref|YP_003400386.1|	-	0.09	12.8	0.5	0.17	11.9	0.5	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc-ribbons_6	PF07191.12	gi|284161763|ref|YP_003400386.1|	-	0.18	11.8	0.5	0.32	11.0	0.5	1.3	1	0	0	1	1	1	0	zinc-ribbons
C1_1	PF00130.22	gi|284161763|ref|YP_003400386.1|	-	0.19	11.7	0.8	0.34	10.8	0.8	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Aconitase	PF00330.20	gi|284161764|ref|YP_003400387.1|	-	4.4e-99	332.6	4.3	3.2e-97	326.4	4.3	2.1	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|284161764|ref|YP_003400387.1|	-	0.024	13.4	0.0	0.04	12.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
GCR	PF02155.15	gi|284161764|ref|YP_003400387.1|	-	0.097	11.7	0.0	0.16	11.0	0.0	1.4	1	1	0	1	1	1	0	Glucocorticoid	receptor
Rsa3	PF14615.6	gi|284161764|ref|YP_003400387.1|	-	0.12	11.9	0.8	0.27	10.8	0.3	1.8	2	0	0	2	2	2	0	Ribosome-assembly	protein	3
LDcluster4	PF18306.1	gi|284161765|ref|YP_003400388.1|	-	2.2e-44	150.8	4.6	2.6e-44	150.6	4.6	1.0	1	0	0	1	1	1	1	SLOG	cluster4	family
DNA_processg_A	PF02481.15	gi|284161765|ref|YP_003400388.1|	-	2.8e-09	36.5	0.9	2.7e-06	26.8	0.3	2.0	2	0	0	2	2	2	2	DNA	recombination-mediator	protein	A
Lysine_decarbox	PF03641.14	gi|284161765|ref|YP_003400388.1|	-	1.3e-08	35.0	0.2	1.3e-08	35.0	0.2	1.8	2	1	0	2	2	2	1	Possible	lysine	decarboxylase
HU-CCDC81_bac_1	PF18174.1	gi|284161765|ref|YP_003400388.1|	-	0.096	12.6	0.3	0.33	10.9	0.0	2.0	1	1	0	2	2	2	0	CCDC81-like	prokaryotic	HU	domain	1
Mastoparan_2	PF08251.11	gi|284161765|ref|YP_003400388.1|	-	0.11	12.7	1.2	0.3	11.4	1.2	1.7	1	0	0	1	1	1	0	Mastoparan	peptide
Aminotran_1_2	PF00155.21	gi|284161766|ref|YP_003400389.1|	-	1.8e-51	175.4	0.0	2.1e-51	175.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.13	gi|284161766|ref|YP_003400389.1|	-	5.7e-09	35.3	0.0	1.2e-08	34.2	0.0	1.5	1	1	1	2	2	2	1	Allinase
Cys_Met_Meta_PP	PF01053.20	gi|284161766|ref|YP_003400389.1|	-	0.02	13.4	0.0	0.024	13.2	0.0	1.1	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|284161766|ref|YP_003400389.1|	-	0.082	11.9	0.0	0.18	10.7	0.0	1.5	2	0	0	2	2	2	0	Aminotransferase	class-V
HTH_19	PF12844.7	gi|284161766|ref|YP_003400389.1|	-	0.091	12.8	0.5	0.49	10.4	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
TERB2	PF15101.6	gi|284161767|ref|YP_003400390.1|	-	0.0049	16.9	0.2	0.0051	16.9	0.2	1.2	1	0	0	1	1	1	1	Telomere-associated	protein	TERB2
DisA_N	PF02457.16	gi|284161768|ref|YP_003400391.1|	-	1.7e-21	76.0	0.1	2.8e-21	75.3	0.1	1.4	1	0	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
DUF87	PF01935.17	gi|284161769|ref|YP_003400392.1|	-	2.8e-44	151.9	0.0	4.6e-44	151.2	0.0	1.3	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
HAS-barrel	PF09378.10	gi|284161769|ref|YP_003400392.1|	-	2.5e-13	50.0	0.9	6.3e-13	48.7	0.2	2.1	2	0	0	2	2	2	1	HAS	barrel	domain
DUF853	PF05872.12	gi|284161769|ref|YP_003400392.1|	-	1e-05	24.4	0.1	4.1e-05	22.4	0.0	1.8	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|284161769|ref|YP_003400392.1|	-	5.3e-05	22.3	0.0	0.0039	16.1	0.0	2.2	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_10	PF12846.7	gi|284161769|ref|YP_003400392.1|	-	0.0052	15.7	0.0	0.11	11.4	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
Lon_C	PF05362.13	gi|284161770|ref|YP_003400393.1|	-	2.5e-32	112.1	2.8	4.3e-32	111.3	2.8	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_32	PF13654.6	gi|284161770|ref|YP_003400393.1|	-	3.8e-29	101.9	0.1	1.8e-19	70.0	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
Mg_chelatase	PF01078.21	gi|284161770|ref|YP_003400393.1|	-	2.1e-16	60.0	0.3	1.5e-10	40.8	0.1	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|284161770|ref|YP_003400393.1|	-	6.8e-16	58.4	0.0	4.3e-09	36.3	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
LAGLIDADG_3	PF14528.6	gi|284161770|ref|YP_003400393.1|	-	6.7e-14	52.0	1.6	3.6e-10	40.0	0.1	2.8	2	0	0	2	2	2	2	LAGLIDADG-like	domain
AAA_5	PF07728.14	gi|284161770|ref|YP_003400393.1|	-	1.2e-10	41.5	0.0	0.00049	20.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
ChlI	PF13541.6	gi|284161770|ref|YP_003400393.1|	-	7.6e-09	35.5	0.3	1.6e-08	34.4	0.3	1.6	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
MCM	PF00493.23	gi|284161770|ref|YP_003400393.1|	-	1.7e-08	33.8	0.1	0.00086	18.5	0.0	2.4	2	0	0	2	2	2	2	MCM	P-loop	domain
AAA	PF00004.29	gi|284161770|ref|YP_003400393.1|	-	3.1e-06	27.6	0.0	0.0073	16.7	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|284161770|ref|YP_003400393.1|	-	1.4e-05	24.9	0.1	0.039	13.7	0.1	2.6	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|284161770|ref|YP_003400393.1|	-	1.5e-05	25.2	0.0	0.00099	19.4	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|284161770|ref|YP_003400393.1|	-	3.5e-05	24.2	0.0	0.033	14.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_3	PF07726.11	gi|284161770|ref|YP_003400393.1|	-	5.2e-05	23.1	0.0	0.13	12.1	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.6	gi|284161770|ref|YP_003400393.1|	-	7.1e-05	22.9	0.0	0.61	10.2	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
TIP49	PF06068.13	gi|284161770|ref|YP_003400393.1|	-	0.00037	19.8	0.0	0.35	10.0	0.1	2.6	2	0	0	2	2	2	2	TIP49	P-loop	domain
PhoH	PF02562.16	gi|284161770|ref|YP_003400393.1|	-	0.00064	19.2	0.0	0.0049	16.3	0.0	2.2	2	0	0	2	2	2	1	PhoH-like	protein
AAA_7	PF12775.7	gi|284161770|ref|YP_003400393.1|	-	0.00097	18.7	0.0	0.0023	17.5	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
LAGLIDADG_1	PF00961.19	gi|284161770|ref|YP_003400393.1|	-	0.00099	20.0	0.7	0.012	16.6	0.1	2.8	2	1	0	2	2	2	1	LAGLIDADG	endonuclease
AAA_PrkA	PF08298.11	gi|284161770|ref|YP_003400393.1|	-	0.002	17.1	0.1	1.3	7.9	0.0	2.3	2	0	0	2	2	2	2	PrkA	AAA	domain
AAA_30	PF13604.6	gi|284161770|ref|YP_003400393.1|	-	0.0024	17.6	0.0	0.027	14.2	0.0	2.5	3	0	0	3	3	2	1	AAA	domain
DUF87	PF01935.17	gi|284161770|ref|YP_003400393.1|	-	0.0041	17.3	0.0	0.69	10.0	0.0	3.1	3	0	0	3	3	3	1	Helicase	HerA,	central	domain
MCM_lid	PF17855.1	gi|284161770|ref|YP_003400393.1|	-	0.0083	16.5	0.5	0.032	14.7	0.2	2.2	2	0	0	2	2	1	1	MCM	AAA-lid	domain
AAA_16	PF13191.6	gi|284161770|ref|YP_003400393.1|	-	0.0085	16.5	0.0	0.025	15.0	0.0	1.8	1	0	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|284161770|ref|YP_003400393.1|	-	0.023	14.5	0.0	0.059	13.1	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF815	PF05673.13	gi|284161770|ref|YP_003400393.1|	-	0.024	13.8	0.0	0.058	12.5	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.12	gi|284161770|ref|YP_003400393.1|	-	0.026	14.5	0.0	0.074	13.0	0.0	1.9	1	0	0	1	1	1	0	NACHT	domain
ABC_tran	PF00005.27	gi|284161770|ref|YP_003400393.1|	-	0.031	14.8	0.0	0.1	13.1	0.0	1.8	1	0	0	1	1	1	0	ABC	transporter
AAA_10	PF12846.7	gi|284161770|ref|YP_003400393.1|	-	0.038	12.9	0.0	0.077	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
Parvo_NS1	PF01057.17	gi|284161770|ref|YP_003400393.1|	-	0.047	12.8	0.0	0.096	11.8	0.0	1.4	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_33	PF13671.6	gi|284161770|ref|YP_003400393.1|	-	0.067	13.3	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|284161770|ref|YP_003400393.1|	-	0.076	13.0	0.0	0.24	11.4	0.0	1.8	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DUF3784	PF12650.7	gi|284161770|ref|YP_003400393.1|	-	0.095	12.9	1.0	0.25	11.6	1.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3784)
TctB	PF07331.11	gi|284161770|ref|YP_003400393.1|	-	0.11	12.8	0.2	0.2	11.9	0.2	1.3	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
Radical_SAM	PF04055.21	gi|284161771|ref|YP_003400394.1|	-	6.2e-28	98.3	2.2	2.7e-26	92.9	0.4	3.0	2	1	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|284161771|ref|YP_003400394.1|	-	1.2e-22	80.2	0.0	1.2e-21	76.9	0.0	2.3	3	0	0	3	3	3	1	B12	binding	domain
Fer4_14	PF13394.6	gi|284161771|ref|YP_003400394.1|	-	0.0019	18.3	2.1	0.013	15.6	0.1	2.6	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Radical_SAM_N	PF08497.10	gi|284161771|ref|YP_003400394.1|	-	0.0034	16.7	0.0	0.074	12.3	0.0	2.8	1	1	1	2	2	2	1	Radical	SAM	N-terminal
DUF3591	PF12157.8	gi|284161771|ref|YP_003400394.1|	-	0.004	15.9	0.0	0.0056	15.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3591)
Fer4_12	PF13353.6	gi|284161771|ref|YP_003400394.1|	-	0.011	16.0	1.4	0.065	13.5	0.1	2.7	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
FPRL1_inhibitor	PF16104.5	gi|284161771|ref|YP_003400394.1|	-	0.059	13.5	1.0	0.17	12.0	0.1	2.1	2	0	0	2	2	2	0	Formyl	peptide	receptor-like	1	inhibitory	protein
Malic_M	PF03949.15	gi|284161771|ref|YP_003400394.1|	-	0.16	11.2	0.1	0.32	10.2	0.1	1.4	1	0	0	1	1	1	0	Malic	enzyme,	NAD	binding	domain
Radical_SAM	PF04055.21	gi|284161772|ref|YP_003400395.1|	-	4.4e-13	50.0	1.4	4.1e-12	46.8	0.9	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|284161772|ref|YP_003400395.1|	-	1.4e-07	31.6	0.0	2.9e-07	30.6	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
AIRC	PF00731.20	gi|284161774|ref|YP_003400397.1|	-	2.4e-16	59.6	0.2	7.2e-16	58.1	0.1	1.7	2	0	0	2	2	2	1	AIR	carboxylase
CPSase_L_D2	PF02786.17	gi|284161775|ref|YP_003400398.1|	-	8e-113	375.1	0.4	5.7e-73	244.9	0.1	2.4	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.19	gi|284161775|ref|YP_003400398.1|	-	6.7e-45	152.4	4.2	1.9e-44	150.9	4.2	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
MGS	PF02142.22	gi|284161775|ref|YP_003400398.1|	-	4.5e-25	87.7	0.1	8.4e-24	83.6	0.0	3.0	3	0	0	3	3	3	1	MGS-like	domain
Dala_Dala_lig_C	PF07478.13	gi|284161775|ref|YP_003400398.1|	-	5.9e-18	65.1	0.2	7.3e-08	32.2	0.0	2.5	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.22	gi|284161775|ref|YP_003400398.1|	-	7.2e-16	58.2	0.2	4.8e-08	32.8	0.0	2.5	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|284161775|ref|YP_003400398.1|	-	2e-12	47.0	0.1	3.9e-07	29.9	0.1	2.9	2	1	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_5	PF13549.6	gi|284161775|ref|YP_003400398.1|	-	6.2e-11	42.2	0.0	0.00048	19.7	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	domain
GARS_A	PF01071.19	gi|284161775|ref|YP_003400398.1|	-	2.5e-10	40.5	0.6	1.9e-05	24.5	0.0	2.7	3	0	0	3	3	3	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
RimK	PF08443.11	gi|284161775|ref|YP_003400398.1|	-	4.5e-10	39.4	0.1	0.0005	19.7	0.0	3.0	4	0	0	4	4	4	2	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.14	gi|284161775|ref|YP_003400398.1|	-	7.2e-10	39.1	0.6	2.7e-06	27.5	0.1	2.7	2	0	0	2	2	2	2	ATP-grasp	domain
ATP-grasp_2	PF08442.10	gi|284161775|ref|YP_003400398.1|	-	6.8e-09	35.6	0.3	0.00045	19.9	0.0	2.9	3	0	0	3	3	3	2	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|284161775|ref|YP_003400398.1|	-	1.8e-06	27.6	3.4	0.0022	17.6	0.1	4.1	4	1	0	4	4	4	2	ATP-grasp	domain
DUF4176	PF13780.6	gi|284161775|ref|YP_003400398.1|	-	0.0015	18.6	0.0	3.7	7.7	0.0	2.9	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4176)
Epimerase	PF01370.21	gi|284161775|ref|YP_003400398.1|	-	0.034	13.6	0.0	0.15	11.5	0.0	2.0	3	0	0	3	3	3	0	NAD	dependent	epimerase/dehydratase	family
CoA_binding_2	PF13380.6	gi|284161775|ref|YP_003400398.1|	-	0.039	14.5	0.0	0.84	10.1	0.0	3.3	3	1	0	3	3	2	0	CoA	binding	domain
HTH_19	PF12844.7	gi|284161775|ref|YP_003400398.1|	-	0.047	13.7	0.1	21	5.2	0.1	4.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
MerR-DNA-bind	PF09278.11	gi|284161775|ref|YP_003400398.1|	-	0.11	13.0	0.0	39	4.9	0.0	4.2	4	0	0	4	4	4	0	MerR,	DNA	binding
Glyco_trans_4_2	PF13477.6	gi|284161775|ref|YP_003400398.1|	-	1.2	9.2	5.6	13	5.8	0.0	4.8	6	1	0	6	6	6	0	Glycosyl	transferase	4-like
CPSase_sm_chain	PF00988.22	gi|284161776|ref|YP_003400399.1|	-	8.5e-53	177.6	0.0	1.3e-52	177.0	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.28	gi|284161776|ref|YP_003400399.1|	-	1.7e-51	174.7	0.0	2.2e-51	174.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|284161776|ref|YP_003400399.1|	-	2.8e-08	33.8	0.1	0.008	16.0	0.0	2.2	1	1	1	2	2	2	2	Peptidase	C26
SAICAR_synt	PF01259.18	gi|284161777|ref|YP_003400400.1|	-	6.4e-29	101.3	0.1	1.2e-28	100.4	0.1	1.4	1	1	0	1	1	1	1	SAICAR	synthetase
ANAPC9	PF12856.7	gi|284161777|ref|YP_003400400.1|	-	0.02	15.1	0.0	0.048	13.8	0.0	1.6	1	1	0	1	1	1	0	Anaphase-promoting	complex	subunit	9
AIRC	PF00731.20	gi|284161778|ref|YP_003400401.1|	-	4.6e-41	139.9	0.5	5.2e-41	139.7	0.5	1.0	1	0	0	1	1	1	1	AIR	carboxylase
adh_short	PF00106.25	gi|284161778|ref|YP_003400401.1|	-	0.032	13.7	0.1	0.048	13.1	0.1	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
HGTP_anticodon	PF03129.20	gi|284161778|ref|YP_003400401.1|	-	0.056	13.6	0.7	0.18	12.0	0.1	2.0	2	0	0	2	2	2	0	Anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|284161778|ref|YP_003400401.1|	-	0.089	13.4	0.9	2.3	8.9	0.0	2.5	2	1	1	3	3	3	0	Arginyl	tRNA	synthetase	N	terminal	domain
HTH_20	PF12840.7	gi|284161779|ref|YP_003400402.1|	-	6e-10	39.0	0.1	9.3e-10	38.4	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|284161779|ref|YP_003400402.1|	-	2e-09	37.1	0.1	3e-09	36.6	0.1	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|284161779|ref|YP_003400402.1|	-	1.8e-08	33.8	0.1	2.5e-08	33.3	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|284161779|ref|YP_003400402.1|	-	9.4e-08	31.8	0.0	1.2e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|284161779|ref|YP_003400402.1|	-	2e-06	27.6	0.9	2.1e-06	27.5	0.2	1.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_AsnC-type	PF13404.6	gi|284161779|ref|YP_003400402.1|	-	0.00018	21.3	0.4	0.00069	19.4	0.0	1.9	1	1	1	2	2	2	1	AsnC-type	helix-turn-helix	domain
MarR	PF01047.22	gi|284161779|ref|YP_003400402.1|	-	0.0014	18.5	0.0	0.0026	17.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|284161779|ref|YP_003400402.1|	-	0.0064	16.4	0.0	0.0078	16.2	0.0	1.2	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_11	PF08279.12	gi|284161779|ref|YP_003400402.1|	-	0.0088	16.0	0.0	0.014	15.3	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
FaeA	PF04703.12	gi|284161779|ref|YP_003400402.1|	-	0.012	15.9	0.0	0.018	15.4	0.0	1.2	1	0	0	1	1	1	0	FaeA-like	protein
LexA_DNA_bind	PF01726.16	gi|284161779|ref|YP_003400402.1|	-	0.025	14.4	0.0	0.067	13.0	0.0	1.7	2	1	0	2	2	2	0	LexA	DNA	binding	domain
HTH_10	PF04967.12	gi|284161779|ref|YP_003400402.1|	-	0.045	13.6	0.4	0.2	11.5	0.0	2.2	2	1	1	3	3	3	0	HTH	DNA	binding	domain
Glyco_trans_1_2	PF13524.6	gi|284161779|ref|YP_003400402.1|	-	0.046	14.1	0.7	7.5	7.0	0.3	2.1	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
HTH_9	PF08221.11	gi|284161779|ref|YP_003400402.1|	-	0.051	13.7	0.0	0.078	13.1	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
RNA_pol_Rpb2_4	PF04566.13	gi|284161779|ref|YP_003400402.1|	-	0.067	13.5	0.0	0.1	12.9	0.0	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	4
HTH_DeoR	PF08220.12	gi|284161779|ref|YP_003400402.1|	-	0.076	12.8	0.0	0.14	11.9	0.0	1.5	2	0	0	2	2	1	0	DeoR-like	helix-turn-helix	domain
Rrf2	PF02082.20	gi|284161779|ref|YP_003400402.1|	-	0.08	13.3	0.0	0.14	12.5	0.0	1.5	1	1	0	1	1	1	0	Transcriptional	regulator
DUF2981	PF11200.8	gi|284161780|ref|YP_003400403.1|	-	0.85	9.3	3.3	1.5	8.5	3.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2981)
DUF3561	PF12084.8	gi|284161780|ref|YP_003400403.1|	-	1.5	8.9	8.1	0.14	12.2	1.7	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3561)
PNTB	PF02233.16	gi|284161780|ref|YP_003400403.1|	-	9.4	5.0	11.7	1.6	7.5	8.3	1.3	2	0	0	2	2	2	0	NAD(P)	transhydrogenase	beta	subunit
Thioredoxin_3	PF13192.6	gi|284161781|ref|YP_003400404.1|	-	1.1e-25	89.4	1.0	1.3e-25	89.2	1.0	1.1	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|284161781|ref|YP_003400404.1|	-	0.00047	20.3	0.3	0.0012	19.0	0.3	1.7	1	1	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.6	gi|284161781|ref|YP_003400404.1|	-	0.0017	18.5	0.5	0.016	15.3	0.0	2.0	1	1	1	2	2	2	1	Thioredoxin
ArsD	PF06953.11	gi|284161781|ref|YP_003400404.1|	-	0.013	15.8	0.0	0.025	14.9	0.0	1.5	1	1	0	1	1	1	0	Arsenical	resistance	operon	trans-acting	repressor	ArsD
zinc_ribbon_4	PF13717.6	gi|284161781|ref|YP_003400404.1|	-	0.047	13.6	0.1	0.08	12.9	0.1	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
VIT	PF08487.10	gi|284161781|ref|YP_003400404.1|	-	0.06	13.6	0.0	0.069	13.4	0.0	1.1	1	0	0	1	1	1	0	Vault	protein	inter-alpha-trypsin	domain
DUF1525	PF07511.11	gi|284161781|ref|YP_003400404.1|	-	0.16	12.1	0.1	0.17	12.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1525)
MFS_1	PF07690.16	gi|284161782|ref|YP_003400405.1|	-	4.6e-65	219.9	70.7	7.1e-52	176.5	46.0	2.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|284161782|ref|YP_003400405.1|	-	8.2e-10	38.1	13.3	8.2e-10	38.1	13.3	3.0	1	1	2	3	3	3	1	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|284161782|ref|YP_003400405.1|	-	6.9e-08	31.7	22.4	0.00033	19.7	6.4	2.5	2	0	0	2	2	2	2	MFS_1	like	family
MFS_2	PF13347.6	gi|284161782|ref|YP_003400405.1|	-	0.0044	15.6	43.0	0.047	12.2	27.4	2.9	1	1	0	2	2	2	2	MFS/sugar	transport	protein
OATP	PF03137.20	gi|284161782|ref|YP_003400405.1|	-	0.44	8.8	25.5	1.1	7.5	1.2	4.1	2	2	2	4	4	4	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MarR	PF01047.22	gi|284161783|ref|YP_003400406.1|	-	1.3e-09	37.8	0.1	2.6e-09	36.9	0.1	1.5	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|284161783|ref|YP_003400406.1|	-	2.9e-09	36.7	0.1	4.7e-09	36.0	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|284161783|ref|YP_003400406.1|	-	9.6e-09	34.7	0.1	2.2e-08	33.5	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|284161783|ref|YP_003400406.1|	-	9.2e-07	29.3	0.2	1.5e-06	28.6	0.2	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|284161783|ref|YP_003400406.1|	-	1.5e-06	27.9	0.6	3e-05	23.8	0.1	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|284161783|ref|YP_003400406.1|	-	1.9e-06	27.7	0.0	3.3e-06	27.0	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.6	gi|284161783|ref|YP_003400406.1|	-	2.6e-05	23.8	0.2	5e-05	22.9	0.2	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.16	gi|284161783|ref|YP_003400406.1|	-	2.6e-05	24.5	2.5	9e-05	22.8	2.5	1.8	1	1	0	1	1	1	1	Penicillinase	repressor
GntR	PF00392.21	gi|284161783|ref|YP_003400406.1|	-	2.9e-05	23.6	0.3	6.6e-05	22.5	0.3	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.7	gi|284161783|ref|YP_003400406.1|	-	6.1e-05	23.0	0.0	0.00011	22.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
SMC_ScpB	PF04079.16	gi|284161783|ref|YP_003400406.1|	-	6.3e-05	22.6	0.7	0.00011	21.9	0.2	1.6	1	1	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
HTH_5	PF01022.20	gi|284161783|ref|YP_003400406.1|	-	8.5e-05	22.3	0.0	0.00016	21.4	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.17	gi|284161783|ref|YP_003400406.1|	-	0.00017	21.4	2.6	0.0083	16.0	0.2	2.5	3	0	0	3	3	2	1	HxlR-like	helix-turn-helix
TFIIE_alpha	PF02002.17	gi|284161783|ref|YP_003400406.1|	-	0.00034	20.4	2.5	0.0011	18.8	2.1	2.0	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_IclR	PF09339.10	gi|284161783|ref|YP_003400406.1|	-	0.00037	20.2	0.0	0.00061	19.5	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.6	gi|284161783|ref|YP_003400406.1|	-	0.00045	20.1	0.6	0.0011	18.9	0.2	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|284161783|ref|YP_003400406.1|	-	0.00063	19.6	0.2	0.0015	18.4	0.2	1.7	1	0	0	1	1	1	1	HTH	domain
HTH_28	PF13518.6	gi|284161783|ref|YP_003400406.1|	-	0.0012	18.9	0.3	0.002	18.2	0.3	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4364	PF14277.6	gi|284161783|ref|YP_003400406.1|	-	0.0016	18.2	0.9	0.0022	17.8	0.9	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
PadR	PF03551.14	gi|284161783|ref|YP_003400406.1|	-	0.0017	18.3	0.4	0.0035	17.3	0.4	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
PaaX	PF07848.12	gi|284161783|ref|YP_003400406.1|	-	0.0021	18.2	0.2	0.0034	17.5	0.2	1.3	1	0	0	1	1	1	1	PaaX-like	protein
Rrf2	PF02082.20	gi|284161783|ref|YP_003400406.1|	-	0.0026	18.1	0.2	0.0059	16.9	0.2	1.6	1	1	0	1	1	1	1	Transcriptional	regulator
HTH_29	PF13551.6	gi|284161783|ref|YP_003400406.1|	-	0.0028	17.7	0.2	0.0069	16.4	0.1	1.7	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_34	PF13601.6	gi|284161783|ref|YP_003400406.1|	-	0.0071	16.5	0.3	0.015	15.5	0.3	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RepL	PF05732.11	gi|284161783|ref|YP_003400406.1|	-	0.0079	15.6	4.7	0.028	13.9	4.7	2.0	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_10	PF04967.12	gi|284161783|ref|YP_003400406.1|	-	0.0079	16.0	0.2	0.023	14.5	0.2	1.8	1	1	0	1	1	1	1	HTH	DNA	binding	domain
HTH_1	PF00126.27	gi|284161783|ref|YP_003400406.1|	-	0.0083	16.1	0.6	0.02	14.8	0.6	1.7	1	1	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Fe_dep_repress	PF01325.19	gi|284161783|ref|YP_003400406.1|	-	0.0087	16.2	0.1	0.023	14.9	0.1	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
KORA	PF16509.5	gi|284161783|ref|YP_003400406.1|	-	0.011	15.9	0.2	0.034	14.4	0.0	2.0	2	1	0	2	2	2	0	TrfB	plasmid	transcriptional	repressor
Sigma70_r4	PF04545.16	gi|284161783|ref|YP_003400406.1|	-	0.012	15.1	0.0	0.028	14.0	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
Rio2_N	PF09202.11	gi|284161783|ref|YP_003400406.1|	-	0.015	15.5	1.1	0.091	13.0	0.1	2.4	1	1	2	3	3	3	0	Rio2,	N-terminal
B-block_TFIIIC	PF04182.12	gi|284161783|ref|YP_003400406.1|	-	0.021	15.0	0.1	0.031	14.4	0.1	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DprA_WH	PF17782.1	gi|284161783|ref|YP_003400406.1|	-	0.022	14.9	0.0	0.036	14.2	0.0	1.3	1	0	0	1	1	1	0	DprA	winged	helix	domain
HTH_40	PF14493.6	gi|284161783|ref|YP_003400406.1|	-	0.028	14.9	1.1	0.049	14.1	1.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Phage_rep_O	PF04492.13	gi|284161783|ref|YP_003400406.1|	-	0.034	14.7	0.1	0.073	13.7	0.0	1.7	2	0	0	2	2	1	0	Bacteriophage	replication	protein	O
FaeA	PF04703.12	gi|284161783|ref|YP_003400406.1|	-	0.05	14.0	0.1	0.079	13.3	0.1	1.4	1	0	0	1	1	1	0	FaeA-like	protein
S10_plectin	PF03501.15	gi|284161783|ref|YP_003400406.1|	-	0.052	13.6	0.0	0.086	12.9	0.0	1.4	1	0	0	1	1	1	0	Plectin/S10	domain
Cdc6_C	PF09079.11	gi|284161783|ref|YP_003400406.1|	-	0.059	13.3	0.1	0.093	12.7	0.1	1.4	1	0	0	1	1	1	0	CDC6,	C	terminal	winged	helix	domain
DUF4423	PF14394.6	gi|284161783|ref|YP_003400406.1|	-	0.062	13.0	3.7	2.3	7.9	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
FdhD-NarQ	PF02634.15	gi|284161784|ref|YP_003400407.1|	-	6.7e-28	98.0	1.8	2.7e-24	86.2	1.3	2.0	1	1	1	2	2	2	2	FdhD/NarQ	family
HTH_1	PF00126.27	gi|284161785|ref|YP_003400408.1|	-	1.4e-14	53.8	0.0	2.1e-14	53.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_29	PF13551.6	gi|284161785|ref|YP_003400408.1|	-	0.00032	20.7	0.0	0.00048	20.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_28	PF13518.6	gi|284161785|ref|YP_003400408.1|	-	0.014	15.5	0.0	0.023	14.8	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.19	gi|284161785|ref|YP_003400408.1|	-	0.021	14.6	0.0	0.032	14.0	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_45	PF14947.6	gi|284161785|ref|YP_003400408.1|	-	0.024	14.6	0.0	0.043	13.8	0.0	1.4	1	1	0	1	1	1	0	Winged	helix-turn-helix
HTH_23	PF13384.6	gi|284161785|ref|YP_003400408.1|	-	0.047	13.5	0.0	0.071	12.9	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF2089	PF09862.9	gi|284161785|ref|YP_003400408.1|	-	0.065	13.3	0.0	0.09	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
HTH_11	PF08279.12	gi|284161785|ref|YP_003400408.1|	-	0.12	12.3	0.1	0.29	11.1	0.0	1.7	2	0	0	2	2	2	0	HTH	domain
NUMOD1	PF07453.13	gi|284161785|ref|YP_003400408.1|	-	0.14	12.5	0.2	0.24	11.7	0.2	1.4	1	0	0	1	1	1	0	NUMOD1	domain
HTH_50	PF18024.1	gi|284161785|ref|YP_003400408.1|	-	0.2	11.3	0.6	0.36	10.5	0.1	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Nitrate_red_del	PF02613.15	gi|284161786|ref|YP_003400409.1|	-	2.6e-14	53.4	0.0	3.6e-14	52.9	0.0	1.2	1	0	0	1	1	1	1	Nitrate	reductase	delta	subunit
DNA_alkylation	PF08713.11	gi|284161786|ref|YP_003400409.1|	-	0.037	13.8	0.0	0.059	13.1	0.0	1.4	1	0	0	1	1	1	0	DNA	alkylation	repair	enzyme
GRIM-19	PF06212.12	gi|284161786|ref|YP_003400409.1|	-	0.066	13.2	0.1	0.11	12.5	0.1	1.4	1	0	0	1	1	1	0	GRIM-19	protein
Fer4	PF00037.27	gi|284161787|ref|YP_003400410.1|	-	9.3e-10	37.9	39.3	2.5e-05	23.9	2.8	5.3	5	1	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284161787|ref|YP_003400410.1|	-	2.1e-07	31.0	12.3	2.1e-07	31.0	12.3	3.7	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161787|ref|YP_003400410.1|	-	5.1e-07	30.5	29.6	0.014	16.4	1.1	4.8	4	1	0	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|284161787|ref|YP_003400410.1|	-	1e-06	29.2	31.6	0.0095	16.5	0.2	4.6	3	2	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161787|ref|YP_003400410.1|	-	2.5e-06	27.5	13.2	2.5e-06	27.5	13.2	4.4	2	2	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284161787|ref|YP_003400410.1|	-	3.6e-05	23.7	14.0	9.1e-05	22.4	2.8	5.7	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161787|ref|YP_003400410.1|	-	6.5e-05	23.0	38.0	0.011	15.9	2.0	4.2	3	1	0	4	4	3	3	4Fe-4S	dicluster	domain
FlpD	PF02662.16	gi|284161787|ref|YP_003400410.1|	-	0.0012	18.9	0.1	0.0039	17.2	0.1	1.9	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Fer4_8	PF13183.6	gi|284161787|ref|YP_003400410.1|	-	0.0061	17.0	24.8	0.056	13.9	0.9	4.7	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161787|ref|YP_003400410.1|	-	0.0078	16.3	1.1	0.0078	16.3	1.1	5.6	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|284161787|ref|YP_003400410.1|	-	0.016	15.4	7.4	0.016	15.4	7.4	3.4	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284161787|ref|YP_003400410.1|	-	0.039	14.5	2.3	0.039	14.5	2.3	5.7	7	0	0	7	7	4	0	4Fe-4S	binding	domain
Ribosomal_L32p	PF01783.23	gi|284161787|ref|YP_003400410.1|	-	0.086	13.1	1.6	0.71	10.2	0.0	3.1	3	0	0	3	3	3	0	Ribosomal	L32p	protein	family
Prok-RING_1	PF14446.6	gi|284161787|ref|YP_003400410.1|	-	0.73	9.8	0.0	0.73	9.8	0.0	4.1	5	0	0	5	5	4	0	Prokaryotic	RING	finger	family	1
Cys_rich_KTR	PF14205.6	gi|284161787|ref|YP_003400410.1|	-	2.4	8.0	8.4	0.36	10.7	2.2	3.0	2	1	0	2	2	2	0	Cysteine-rich	KTR
Fer4_17	PF13534.6	gi|284161787|ref|YP_003400410.1|	-	5.2	7.7	36.5	1.4	9.5	3.1	5.2	4	1	3	7	7	7	0	4Fe-4S	dicluster	domain
Molybdopterin	PF00384.22	gi|284161788|ref|YP_003400411.1|	-	2.7e-73	247.4	0.0	3.5e-73	247.0	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.21	gi|284161788|ref|YP_003400411.1|	-	1.4e-17	63.7	0.0	2.8e-17	62.7	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|284161788|ref|YP_003400411.1|	-	9.9e-17	60.7	0.5	2.4e-16	59.5	0.5	1.7	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
TAT_signal	PF10518.9	gi|284161788|ref|YP_003400411.1|	-	0.0092	15.8	0.4	0.022	14.6	0.4	1.6	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Fer4_11	PF13247.6	gi|284161789|ref|YP_003400412.1|	-	9.6e-14	51.3	18.0	1.9e-13	50.3	10.7	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284161789|ref|YP_003400412.1|	-	9.8e-13	48.5	26.1	1.3e-06	28.9	9.7	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161789|ref|YP_003400412.1|	-	1.8e-11	44.0	19.7	8.7e-06	25.8	8.1	2.5	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161789|ref|YP_003400412.1|	-	3.8e-10	39.7	29.1	4.5e-06	26.7	7.1	3.9	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284161789|ref|YP_003400412.1|	-	4.7e-10	38.9	39.0	3.5e-09	36.1	2.9	5.6	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161789|ref|YP_003400412.1|	-	1.5e-09	37.5	39.8	2e-07	30.8	3.0	4.9	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161789|ref|YP_003400412.1|	-	2.8e-07	30.6	20.2	3.1e-05	24.0	9.3	3.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161789|ref|YP_003400412.1|	-	5.9e-07	29.2	10.3	2.3e-06	27.4	1.5	4.8	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284161789|ref|YP_003400412.1|	-	0.0002	22.2	25.7	0.12	13.3	4.9	4.4	4	1	0	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|284161789|ref|YP_003400412.1|	-	0.00099	19.4	32.6	0.032	14.7	3.0	4.7	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|284161789|ref|YP_003400412.1|	-	0.0028	18.4	0.3	0.0028	18.4	0.3	3.4	4	0	0	4	4	3	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|284161789|ref|YP_003400412.1|	-	0.0097	16.8	41.2	0.011	16.6	4.9	4.7	4	1	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284161789|ref|YP_003400412.1|	-	0.01	16.4	1.4	0.01	16.4	1.4	3.9	4	1	0	4	4	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
MciZ	PF13072.6	gi|284161789|ref|YP_003400412.1|	-	0.19	11.6	0.0	20	5.1	0.1	2.3	2	0	0	2	2	2	0	Mother	cell	inhibitor	of	FtsZ
Fer4_17	PF13534.6	gi|284161789|ref|YP_003400412.1|	-	0.21	12.2	31.9	0.97	10.0	10.6	4.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284161789|ref|YP_003400412.1|	-	0.31	11.5	33.5	0.26	11.8	9.7	3.8	2	2	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|284161789|ref|YP_003400412.1|	-	8.1	6.3	21.4	0.58	9.9	2.8	3.9	3	1	1	4	4	4	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Ni_hydr_CYTB	PF01292.20	gi|284161791|ref|YP_003400414.1|	-	1.2e-07	31.5	18.9	1.2e-07	31.5	18.9	2.1	2	1	0	2	2	2	1	Prokaryotic	cytochrome	b561
PepSY_TM	PF03929.16	gi|284161791|ref|YP_003400414.1|	-	0.024	14.3	1.2	0.024	14.3	1.2	2.4	2	0	0	2	2	2	0	PepSY-associated	TM	region
DUF4231	PF14015.6	gi|284161791|ref|YP_003400414.1|	-	4	7.9	5.5	1.1	9.8	0.6	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Diphthami_syn_2	PF01902.17	gi|284161792|ref|YP_003400415.1|	-	2.1e-56	190.9	0.1	2.3e-56	190.7	0.1	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
QueC	PF06508.13	gi|284161792|ref|YP_003400415.1|	-	0.11	12.0	0.0	0.19	11.2	0.0	1.5	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
GATase	PF00117.28	gi|284161793|ref|YP_003400416.1|	-	5.5e-07	29.5	0.0	7.2e-07	29.2	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|284161793|ref|YP_003400416.1|	-	0.00012	22.0	0.1	0.0019	18.0	0.1	2.1	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|284161793|ref|YP_003400416.1|	-	0.024	14.3	0.0	0.033	13.8	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
SOR_SNZ	PF01680.17	gi|284161794|ref|YP_003400417.1|	-	3.2e-100	334.1	10.3	8.7e-97	322.9	8.9	2.3	2	0	0	2	2	2	2	SOR/SNZ	family
ThiG	PF05690.14	gi|284161794|ref|YP_003400417.1|	-	4.7e-09	35.9	7.6	2.4e-06	27.1	0.1	2.6	3	1	0	3	3	3	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|284161794|ref|YP_003400417.1|	-	7.8e-05	21.9	1.3	0.18	10.8	0.0	2.3	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|284161794|ref|YP_003400417.1|	-	0.00046	19.7	5.2	0.0018	17.7	0.1	2.5	2	0	0	2	2	2	1	Nitronate	monooxygenase
NanE	PF04131.14	gi|284161794|ref|YP_003400417.1|	-	0.0039	16.4	1.6	0.054	12.7	0.0	2.7	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IGPS	PF00218.21	gi|284161794|ref|YP_003400417.1|	-	0.0077	15.4	0.2	0.22	10.7	0.0	2.5	2	1	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
Chaperone_III	PF07824.12	gi|284161794|ref|YP_003400417.1|	-	0.0096	16.1	0.0	0.35	11.1	0.0	2.8	3	0	0	3	3	3	1	Type	III	secretion	chaperone	domain
His_biosynth	PF00977.21	gi|284161794|ref|YP_003400417.1|	-	0.01	15.3	0.4	0.5	9.8	0.0	2.7	2	1	0	2	2	2	0	Histidine	biosynthesis	protein
OMPdecase	PF00215.24	gi|284161794|ref|YP_003400417.1|	-	0.012	15.3	1.3	0.015	14.9	0.2	1.7	2	1	0	2	2	2	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
FMN_dh	PF01070.18	gi|284161794|ref|YP_003400417.1|	-	0.016	14.3	1.7	0.17	10.9	0.1	2.4	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
TMP-TENI	PF02581.17	gi|284161794|ref|YP_003400417.1|	-	0.021	14.1	0.8	0.98	8.7	0.0	2.4	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase
SNO	PF01174.19	gi|284161795|ref|YP_003400418.1|	-	5.3e-52	176.4	0.3	5.9e-52	176.2	0.3	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|284161795|ref|YP_003400418.1|	-	3.1e-10	40.0	0.1	4e-10	39.6	0.1	1.3	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|284161795|ref|YP_003400418.1|	-	4e-06	26.7	0.0	8.5e-06	25.7	0.0	1.5	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_S51	PF03575.17	gi|284161795|ref|YP_003400418.1|	-	1.4e-05	24.9	0.1	1.9e-05	24.4	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	S51
DJ-1_PfpI	PF01965.24	gi|284161795|ref|YP_003400418.1|	-	0.00041	20.2	0.2	0.00089	19.1	0.2	1.6	1	1	0	1	1	1	1	DJ-1/PfpI	family
Peptidase_C26	PF07722.13	gi|284161795|ref|YP_003400418.1|	-	0.00078	19.2	0.1	0.0096	15.7	0.1	2.5	1	1	0	1	1	1	1	Peptidase	C26
DUF4448	PF14610.6	gi|284161796|ref|YP_003400419.1|	-	0.0013	18.6	0.1	0.0024	17.7	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4448)
SKG6	PF08693.10	gi|284161796|ref|YP_003400419.1|	-	0.0052	16.2	0.6	0.012	15.0	0.6	1.6	1	0	0	1	1	1	1	Transmembrane	alpha-helix	domain
fn3_3	PF14686.6	gi|284161796|ref|YP_003400419.1|	-	0.0055	16.5	0.5	0.017	14.9	0.5	1.9	1	1	0	1	1	1	1	Polysaccharide	lyase	family	4,	domain	II
DUF2812	PF11193.8	gi|284161796|ref|YP_003400419.1|	-	0.1	12.8	0.2	0.61	10.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2812)
ABC_tran	PF00005.27	gi|284161797|ref|YP_003400420.1|	-	2.3e-33	115.6	0.0	2.9e-33	115.3	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284161797|ref|YP_003400420.1|	-	7.4e-10	39.1	0.0	2.8e-05	24.1	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284161797|ref|YP_003400420.1|	-	3.5e-05	23.3	0.0	0.0029	17.1	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|284161797|ref|YP_003400420.1|	-	0.00036	20.2	0.0	0.00069	19.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|284161797|ref|YP_003400420.1|	-	0.00064	19.7	0.0	0.0011	18.9	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_25	PF13481.6	gi|284161797|ref|YP_003400420.1|	-	0.0015	18.2	0.0	0.02	14.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|284161797|ref|YP_003400420.1|	-	0.0032	17.8	0.1	0.066	13.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284161797|ref|YP_003400420.1|	-	0.0036	17.7	0.1	0.0058	17.0	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
T2SSE	PF00437.20	gi|284161797|ref|YP_003400420.1|	-	0.0051	15.9	0.0	0.0081	15.2	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_18	PF13238.6	gi|284161797|ref|YP_003400420.1|	-	0.054	14.0	0.0	0.16	12.5	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|284161797|ref|YP_003400420.1|	-	0.059	13.5	0.0	0.17	12.1	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|284161797|ref|YP_003400420.1|	-	0.068	12.9	0.0	0.15	11.8	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_15	PF13175.6	gi|284161797|ref|YP_003400420.1|	-	0.078	12.7	0.0	2	8.0	0.0	2.0	1	1	0	2	2	2	0	AAA	ATPase	domain
SbcCD_C	PF13558.6	gi|284161797|ref|YP_003400420.1|	-	0.091	13.0	0.0	1.7	8.9	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
RNA12	PF10443.9	gi|284161797|ref|YP_003400420.1|	-	0.097	11.4	0.0	0.14	10.9	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
AAA_24	PF13479.6	gi|284161797|ref|YP_003400420.1|	-	0.17	11.6	0.0	0.29	10.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|284161797|ref|YP_003400420.1|	-	0.18	12.3	0.2	0.38	11.2	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
MacB_PCD	PF12704.7	gi|284161798|ref|YP_003400421.1|	-	1.2e-24	87.7	1.3	1.6e-24	87.3	0.0	1.8	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|284161798|ref|YP_003400421.1|	-	1.3e-12	48.1	4.4	1.3e-12	48.1	4.4	3.2	4	0	0	4	4	4	1	FtsX-like	permease	family
TarH	PF02203.15	gi|284161798|ref|YP_003400421.1|	-	0.19	11.6	0.2	0.19	11.6	0.2	2.1	2	0	0	2	2	2	0	Tar	ligand	binding	domain	homologue
DUF2148	PF09918.9	gi|284161799|ref|YP_003400422.1|	-	2.2e-30	104.5	0.4	4.2e-30	103.6	0.4	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	ferredoxin	domain	(DUF2148)
FeS	PF04060.13	gi|284161799|ref|YP_003400422.1|	-	0.00086	18.9	1.8	0.0017	18.0	1.8	1.6	1	0	0	1	1	1	1	Putative	Fe-S	cluster
CbiX	PF01903.17	gi|284161800|ref|YP_003400423.1|	-	4.9e-14	52.6	0.0	6.7e-14	52.1	0.0	1.1	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.11	gi|284161800|ref|YP_003400423.1|	-	0.0059	16.0	0.0	0.0075	15.6	0.0	1.1	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
PFOR_II	PF17147.4	gi|284161800|ref|YP_003400423.1|	-	0.015	15.6	0.0	0.025	14.9	0.0	1.3	1	1	0	1	1	1	0	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
SHMT	PF00464.19	gi|284161801|ref|YP_003400424.1|	-	1.5e-79	267.5	0.0	1.9e-79	267.1	0.0	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.21	gi|284161801|ref|YP_003400424.1|	-	1.2e-07	31.3	0.0	2.4e-07	30.2	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|284161801|ref|YP_003400424.1|	-	3.6e-07	29.7	0.0	5.5e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.13	gi|284161801|ref|YP_003400424.1|	-	4.8e-07	29.1	0.0	1.3e-06	27.7	0.0	1.7	1	1	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Aminotran_5	PF00266.19	gi|284161801|ref|YP_003400424.1|	-	4.4e-05	22.6	0.1	7.2e-05	21.9	0.1	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|284161801|ref|YP_003400424.1|	-	0.00039	19.1	0.0	0.00089	17.9	0.0	1.5	1	1	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
TssO	PF17561.2	gi|284161801|ref|YP_003400424.1|	-	0.038	14.1	0.9	0.038	14.1	0.9	1.6	2	0	0	2	2	2	0	Type	VI	secretion	system,	TssO
Bactofilin	PF04519.13	gi|284161802|ref|YP_003400425.1|	-	8.4e-06	26.0	1.5	0.11	12.8	0.4	2.1	1	1	0	2	2	2	2	Polymer-forming	cytoskeletal
Hexapep	PF00132.24	gi|284161802|ref|YP_003400425.1|	-	0.0036	17.0	5.2	1.1	9.1	0.1	3.5	3	1	1	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
FapA	PF03961.13	gi|284161802|ref|YP_003400425.1|	-	0.031	12.9	1.8	0.036	12.7	1.8	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Peptidase_M50	PF02163.22	gi|284161803|ref|YP_003400426.1|	-	3.5e-15	56.0	7.5	2.8e-09	36.6	0.4	2.5	1	1	1	2	2	2	2	Peptidase	family	M50
DUF126	PF01989.16	gi|284161804|ref|YP_003400427.1|	-	9.9e-31	105.4	0.2	1.5e-30	104.8	0.2	1.3	1	0	0	1	1	1	1	Aconitase	X	swivel	domain
ATP-grasp_5	PF13549.6	gi|284161804|ref|YP_003400427.1|	-	0.095	12.1	0.0	0.12	11.8	0.0	1.1	1	0	0	1	1	1	0	ATP-grasp	domain
2-Hacid_dh_C	PF02826.19	gi|284161805|ref|YP_003400428.1|	-	1.2e-69	233.3	0.0	2.3e-69	232.3	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|284161805|ref|YP_003400428.1|	-	4.5e-44	149.4	1.5	9e-44	148.4	0.3	2.0	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
ACT	PF01842.25	gi|284161805|ref|YP_003400428.1|	-	3.7e-11	42.6	0.0	1.3e-10	40.8	0.0	2.0	1	0	0	1	1	1	1	ACT	domain
NAD_binding_2	PF03446.15	gi|284161805|ref|YP_003400428.1|	-	2.4e-05	24.6	0.1	6.4e-05	23.2	0.1	1.8	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|284161805|ref|YP_003400428.1|	-	2.7e-05	23.8	0.0	6e-05	22.7	0.0	1.6	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
UDPG_MGDP_dh_C	PF03720.15	gi|284161805|ref|YP_003400428.1|	-	0.00045	20.6	1.0	0.011	16.2	0.0	2.7	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Resolvase	PF00239.21	gi|284161805|ref|YP_003400428.1|	-	0.13	12.3	0.1	0.27	11.4	0.1	1.4	1	0	0	1	1	1	0	Resolvase,	N	terminal	domain
Desulfoferrod_N	PF06397.12	gi|284161806|ref|YP_003400429.1|	-	0.084	12.5	0.1	0.26	10.9	0.1	1.9	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
Zn_ribbon_SprT	PF17283.2	gi|284161806|ref|YP_003400429.1|	-	0.19	11.7	1.8	0.34	10.8	1.8	1.4	1	0	0	1	1	1	0	SprT-like	zinc	ribbon	domain
NTP_transf_2	PF01909.23	gi|284161807|ref|YP_003400430.1|	-	0.00057	20.1	0.6	0.0021	18.3	0.2	2.1	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
SIS	PF01380.22	gi|284161808|ref|YP_003400431.1|	-	4.6e-19	68.6	0.0	8.2e-19	67.8	0.0	1.4	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|284161808|ref|YP_003400431.1|	-	2.8e-07	30.6	0.8	0.0025	17.8	0.1	2.5	2	1	1	3	3	3	2	SIS	domain
DUF592	PF04574.13	gi|284161808|ref|YP_003400431.1|	-	0.022	14.6	0.0	0.036	13.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF592)
Streptin-Immun	PF11083.8	gi|284161808|ref|YP_003400431.1|	-	0.041	14.3	0.4	0.3	11.5	0.0	2.1	2	0	0	2	2	2	0	Lantibiotic	streptin	immunity	protein
NTP_transferase	PF00483.23	gi|284161809|ref|YP_003400432.1|	-	6.6e-39	134.0	0.0	7.8e-39	133.7	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|284161809|ref|YP_003400432.1|	-	8.2e-11	42.5	0.0	1e-10	42.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.24	gi|284161809|ref|YP_003400432.1|	-	4.1e-06	26.3	6.1	0.0013	18.4	0.9	4.3	2	2	0	2	2	2	2	Bacterial	transferase	hexapeptide	(six	repeats)
CTP_transf_3	PF02348.19	gi|284161809|ref|YP_003400432.1|	-	0.0065	16.4	0.0	0.01	15.8	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase
Hexapep_2	PF14602.6	gi|284161809|ref|YP_003400432.1|	-	0.045	13.5	0.4	0.045	13.5	0.4	2.6	2	1	0	2	2	2	0	Hexapeptide	repeat	of	succinyl-transferase
O-FucT	PF10250.9	gi|284161809|ref|YP_003400432.1|	-	0.1	12.2	0.0	0.16	11.6	0.0	1.2	1	0	0	1	1	1	0	GDP-fucose	protein	O-fucosyltransferase
Trans_coact	PF16805.5	gi|284161809|ref|YP_003400432.1|	-	0.29	11.3	1.3	0.44	10.7	0.1	1.8	2	0	0	2	2	2	0	Phage	late-transcription	coactivator
NMD3	PF04981.13	gi|284161810|ref|YP_003400433.1|	-	1.9e-51	174.9	0.7	2.4e-51	174.6	0.7	1.1	1	0	0	1	1	1	1	NMD3	family
DUF1644	PF07800.12	gi|284161810|ref|YP_003400433.1|	-	0.057	13.5	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1644)
RecR	PF02132.15	gi|284161810|ref|YP_003400433.1|	-	4	7.1	8.7	5	6.8	0.1	3.5	3	0	0	3	3	3	0	RecR	protein
Met_10	PF02475.16	gi|284161811|ref|YP_003400434.1|	-	6.6e-73	244.7	0.2	9.2e-73	244.2	0.2	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|284161811|ref|YP_003400434.1|	-	2.6e-07	30.4	0.1	8.5e-07	28.8	0.1	1.9	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
Methyltransf_18	PF12847.7	gi|284161811|ref|YP_003400434.1|	-	0.0001	22.2	0.0	0.00025	21.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|284161811|ref|YP_003400434.1|	-	0.00057	19.4	0.0	0.0014	18.1	0.0	1.7	1	1	1	2	2	2	1	Putative	methyltransferase
Methyltransf_15	PF09445.10	gi|284161811|ref|YP_003400434.1|	-	0.0016	18.0	0.0	0.0033	17.0	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.13	gi|284161811|ref|YP_003400434.1|	-	0.006	16.0	0.0	0.0081	15.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
tRNA_U5-meth_tr	PF05958.11	gi|284161811|ref|YP_003400434.1|	-	0.019	14.0	0.0	0.031	13.3	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
MTS	PF05175.14	gi|284161811|ref|YP_003400434.1|	-	0.021	14.4	0.0	0.052	13.1	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|284161811|ref|YP_003400434.1|	-	0.14	12.9	0.0	0.32	11.7	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|284161811|ref|YP_003400434.1|	-	0.16	11.6	0.0	0.37	10.4	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
SIS	PF01380.22	gi|284161812|ref|YP_003400435.1|	-	1.4e-16	60.5	0.1	4.3e-16	59.0	0.1	1.7	1	1	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|284161812|ref|YP_003400435.1|	-	7.7e-11	42.2	0.0	3.2e-07	30.4	0.0	2.2	2	0	0	2	2	2	2	SIS	domain
DUF4881	PF16222.5	gi|284161812|ref|YP_003400435.1|	-	0.018	14.9	0.0	0.026	14.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4881)
DUF2529	PF10740.9	gi|284161812|ref|YP_003400435.1|	-	0.02	14.6	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2529)
LSDAT_prok	PF18171.1	gi|284161812|ref|YP_003400435.1|	-	0.058	12.6	0.0	0.085	12.1	0.0	1.2	1	0	0	1	1	1	0	SLOG	in	TRPM,	prokaryote
DUF63	PF01889.17	gi|284161813|ref|YP_003400436.1|	-	1.1e-95	321.0	20.9	1.2e-95	320.8	20.9	1.0	1	0	0	1	1	1	1	Membrane	protein	of	unknown	function	DUF63
CoatB	PF10389.9	gi|284161813|ref|YP_003400436.1|	-	0.0097	15.7	1.4	0.013	15.3	0.2	1.8	2	0	0	2	2	2	1	Bacteriophage	coat	protein	B
CcmH	PF03918.14	gi|284161813|ref|YP_003400436.1|	-	1.2	8.4	2.9	5.9	6.2	0.2	2.4	2	0	0	2	2	2	0	Cytochrome	C	biogenesis	protein
TrmB	PF01978.19	gi|284161814|ref|YP_003400437.1|	-	0.029	14.3	0.0	0.052	13.4	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Nop	PF01798.18	gi|284161815|ref|YP_003400438.1|	-	5.2e-40	137.3	0.3	6.9e-40	136.9	0.3	1.1	1	0	0	1	1	1	1	snoRNA	binding	domain,	fibrillarin
Apolipoprotein	PF01442.18	gi|284161815|ref|YP_003400438.1|	-	0.0015	18.4	1.0	0.0015	18.4	1.0	2.3	2	1	0	2	2	2	1	Apolipoprotein	A1/A4/E	domain
Snapin_Pallidin	PF14712.6	gi|284161815|ref|YP_003400438.1|	-	0.012	16.0	2.1	0.012	16.0	2.1	2.1	3	0	0	3	3	3	0	Snapin/Pallidin
Prominin	PF05478.11	gi|284161815|ref|YP_003400438.1|	-	0.019	13.0	0.2	0.024	12.6	0.2	1.1	1	0	0	1	1	1	0	Prominin
FapA	PF03961.13	gi|284161815|ref|YP_003400438.1|	-	0.045	12.4	4.3	0.036	12.7	3.0	1.4	1	1	0	1	1	1	0	Flagellar	Assembly	Protein	A
S6OS1	PF15676.5	gi|284161815|ref|YP_003400438.1|	-	0.07	11.6	5.2	0.021	13.3	2.8	1.3	2	0	0	2	2	2	0	Six6	opposite	strand	transcript	1	family
FadA	PF09403.10	gi|284161815|ref|YP_003400438.1|	-	0.079	13.5	7.6	0.064	13.7	5.4	2.0	2	1	0	2	2	2	0	Adhesion	protein	FadA
NPV_P10	PF05531.12	gi|284161815|ref|YP_003400438.1|	-	0.12	12.8	1.3	0.29	11.6	1.3	1.6	1	0	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
Sec34	PF04136.15	gi|284161815|ref|YP_003400438.1|	-	0.16	11.9	3.3	0.48	10.3	1.3	2.4	2	1	1	3	3	3	0	Sec34-like	family
DUF5082	PF16888.5	gi|284161815|ref|YP_003400438.1|	-	0.31	11.3	3.2	1.7	9.0	3.2	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5082)
BPS1	PF05633.11	gi|284161815|ref|YP_003400438.1|	-	0.8	8.6	5.2	1.3	8.0	5.2	1.2	1	0	0	1	1	1	0	Protein	BYPASS1-related
zf-like	PF04071.12	gi|284161816|ref|YP_003400439.1|	-	5.5e-21	74.3	11.2	9.1e-21	73.6	11.2	1.3	1	0	0	1	1	1	1	Cysteine-rich	small	domain
DUF89	PF01937.19	gi|284161817|ref|YP_003400440.1|	-	2.2e-51	174.9	0.2	2.4e-51	174.8	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
AMP-binding	PF00501.28	gi|284161818|ref|YP_003400441.1|	-	9.6e-93	311.1	0.0	1.2e-92	310.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|284161818|ref|YP_003400441.1|	-	4e-30	104.6	2.3	4e-30	104.6	0.8	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|284161818|ref|YP_003400441.1|	-	2.5e-17	62.5	0.3	1.1e-16	60.4	0.3	2.2	1	0	0	1	1	1	1	Acetyl-coenzyme	A	synthetase	N-terminus
UPF0182	PF03699.13	gi|284161819|ref|YP_003400442.1|	-	6.8e-267	887.5	19.1	8.3e-267	887.3	19.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0182)
Pribosyltran	PF00156.27	gi|284161820|ref|YP_003400443.1|	-	1.1e-10	41.2	0.6	1e-09	38.1	0.6	2.0	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
Trans_reg_C	PF00486.28	gi|284161820|ref|YP_003400443.1|	-	0.056	13.5	0.1	0.12	12.5	0.0	1.5	2	0	0	2	2	2	0	Transcriptional	regulatory	protein,	C	terminal
E1-E2_ATPase	PF00122.20	gi|284161821|ref|YP_003400444.1|	-	8.7e-55	185.0	3.0	8.7e-55	185.0	3.0	3.4	4	0	0	4	4	4	1	E1-E2	ATPase
Cation_ATPase_C	PF00689.21	gi|284161821|ref|YP_003400444.1|	-	1.7e-36	125.7	12.0	1.7e-36	125.7	12.0	2.1	2	0	0	2	2	2	1	Cation	transporting	ATPase,	C-terminus
Hydrolase	PF00702.26	gi|284161821|ref|YP_003400444.1|	-	4.7e-20	72.8	0.7	3.3e-19	70.0	0.7	2.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.26	gi|284161821|ref|YP_003400444.1|	-	6.8e-17	60.9	0.0	2e-16	59.4	0.0	1.9	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
Cation_ATPase	PF13246.6	gi|284161821|ref|YP_003400444.1|	-	4.7e-12	45.8	0.0	1.2e-11	44.5	0.0	1.7	1	0	0	1	1	1	1	Cation	transport	ATPase	(P-type)
Hydrolase_3	PF08282.12	gi|284161821|ref|YP_003400444.1|	-	9e-11	42.0	0.8	2.2e-06	27.6	0.3	2.5	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|284161821|ref|YP_003400444.1|	-	0.00038	20.9	0.0	0.0013	19.2	0.0	1.9	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
DUF5068	PF16781.5	gi|284161821|ref|YP_003400444.1|	-	0.085	12.6	0.0	0.18	11.5	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5068)
LEM	PF03020.15	gi|284161821|ref|YP_003400444.1|	-	0.11	12.0	0.0	0.98	9.0	0.0	2.3	2	0	0	2	2	2	0	LEM	domain
DUF2663	PF10864.8	gi|284161821|ref|YP_003400444.1|	-	3.8	7.9	6.2	2.9	8.3	0.3	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2663)
AA_kinase	PF00696.28	gi|284161822|ref|YP_003400445.1|	-	1.4e-53	182.0	2.6	2.3e-53	181.3	0.2	2.0	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT	PF01842.25	gi|284161822|ref|YP_003400445.1|	-	8e-19	67.1	2.3	4.4e-09	36.0	0.0	3.0	3	0	0	3	3	3	2	ACT	domain
ACT_7	PF13840.6	gi|284161822|ref|YP_003400445.1|	-	1.4e-18	66.4	3.1	1.4e-08	34.4	0.0	2.8	3	0	0	3	3	3	2	ACT	domain
ACT_6	PF13740.6	gi|284161822|ref|YP_003400445.1|	-	0.029	14.3	0.1	2.4	8.2	0.0	2.7	2	0	0	2	2	2	0	ACT	domain
DUF4974	PF16344.5	gi|284161822|ref|YP_003400445.1|	-	0.031	14.3	1.9	0.54	10.3	0.1	3.1	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4974)
NSP16	PF06460.12	gi|284161822|ref|YP_003400445.1|	-	0.046	12.8	0.1	0.081	12.0	0.1	1.4	1	0	0	1	1	1	0	Coronavirus	NSP16
THUMP	PF02926.17	gi|284161823|ref|YP_003400446.1|	-	4.8e-06	26.7	2.5	2.1e-05	24.7	0.0	2.4	2	0	0	2	2	2	1	THUMP	domain
Radical_SAM	PF04055.21	gi|284161824|ref|YP_003400447.1|	-	8.2e-16	58.8	0.0	1.3e-15	58.1	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284161824|ref|YP_003400447.1|	-	4.2e-08	33.6	0.8	1.2e-07	32.1	0.6	1.8	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Glutaredoxin	PF00462.24	gi|284161824|ref|YP_003400447.1|	-	0.036	14.3	0.0	0.036	14.3	0.0	2.2	3	0	0	3	3	3	0	Glutaredoxin
HSDR_N_2	PF13588.6	gi|284161825|ref|YP_003400448.1|	-	0.00014	21.8	0.0	0.00021	21.2	0.0	1.3	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Fer4	PF00037.27	gi|284161826|ref|YP_003400449.1|	-	3.8e-16	58.2	13.0	2.5e-10	39.7	2.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284161826|ref|YP_003400449.1|	-	2e-11	43.4	12.8	9.4e-08	31.8	2.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284161826|ref|YP_003400449.1|	-	1.5e-10	40.5	11.1	5.7e-07	29.3	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161826|ref|YP_003400449.1|	-	2e-10	41.1	9.7	6.3e-05	23.5	2.9	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284161826|ref|YP_003400449.1|	-	1.1e-09	38.3	10.2	1.6e-09	37.7	10.2	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161826|ref|YP_003400449.1|	-	5.8e-09	35.9	9.5	3.5e-05	23.8	2.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161826|ref|YP_003400449.1|	-	1.4e-08	34.8	22.4	2.5e-07	30.8	12.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161826|ref|YP_003400449.1|	-	6.2e-07	30.3	24.9	0.00091	20.1	2.8	2.2	1	1	2	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|284161826|ref|YP_003400449.1|	-	1.2e-05	25.5	15.4	0.00075	19.8	3.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|284161826|ref|YP_003400449.1|	-	0.00015	22.5	20.7	0.0037	18.1	6.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|284161826|ref|YP_003400449.1|	-	0.00016	22.4	7.8	0.053	14.3	1.1	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|284161826|ref|YP_003400449.1|	-	0.00024	21.6	13.2	0.0054	17.2	2.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284161826|ref|YP_003400449.1|	-	0.00027	21.4	9.5	0.015	15.8	1.6	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|284161826|ref|YP_003400449.1|	-	0.0014	19.0	15.1	0.022	15.2	2.8	2.2	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|284161826|ref|YP_003400449.1|	-	0.0073	16.5	12.5	0.036	14.3	3.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284161826|ref|YP_003400449.1|	-	0.078	13.8	13.9	0.11	13.4	2.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Desulfoferrod_N	PF06397.12	gi|284161826|ref|YP_003400449.1|	-	1.2	8.9	17.2	0.58	9.8	2.2	2.4	2	1	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
FAD_binding_3	PF01494.19	gi|284161827|ref|YP_003400450.1|	-	8.7e-18	64.7	3.4	3.3e-13	49.6	0.6	3.0	2	1	0	2	2	2	2	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|284161827|ref|YP_003400450.1|	-	3.2e-11	43.2	3.0	1.2e-10	41.3	3.0	1.8	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|284161827|ref|YP_003400450.1|	-	5.3e-09	35.4	1.4	0.00058	18.8	0.1	2.9	2	1	0	2	2	2	2	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|284161827|ref|YP_003400450.1|	-	3.3e-08	33.0	0.0	0.0043	16.1	0.0	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
FAD_binding_2	PF00890.24	gi|284161827|ref|YP_003400450.1|	-	3.7e-08	32.9	0.4	7.9e-08	31.8	0.4	1.5	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|284161827|ref|YP_003400450.1|	-	9.7e-07	28.3	3.7	1.8e-06	27.4	1.5	2.4	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|284161827|ref|YP_003400450.1|	-	2e-06	27.9	0.3	6e-06	26.4	0.0	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|284161827|ref|YP_003400450.1|	-	3.3e-06	26.1	1.1	6.2e-06	25.2	0.2	1.8	2	0	0	2	2	2	1	HI0933-like	protein
DAO	PF01266.24	gi|284161827|ref|YP_003400450.1|	-	5.9e-06	26.1	2.2	0.012	15.2	0.4	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|284161827|ref|YP_003400450.1|	-	0.00017	20.9	0.3	0.0007	18.9	0.1	2.0	2	0	0	2	2	2	1	Thi4	family
GIDA	PF01134.22	gi|284161827|ref|YP_003400450.1|	-	0.00017	20.8	0.1	0.00033	19.9	0.1	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|284161827|ref|YP_003400450.1|	-	0.0024	17.2	0.6	0.0061	15.8	0.6	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|284161827|ref|YP_003400450.1|	-	0.012	15.5	1.1	0.028	14.3	0.0	2.1	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HRDC	PF00570.23	gi|284161827|ref|YP_003400450.1|	-	0.016	15.2	0.1	4.6	7.3	0.0	2.6	2	0	0	2	2	2	0	HRDC	domain
NAD_binding_9	PF13454.6	gi|284161827|ref|YP_003400450.1|	-	0.092	12.7	0.6	13	5.8	0.2	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Pyr_redox	PF00070.27	gi|284161827|ref|YP_003400450.1|	-	0.55	10.8	4.3	1.1	9.9	0.2	3.0	3	1	1	4	4	4	0	Pyridine	nucleotide-disulphide	oxidoreductase
NusG_II	PF07009.11	gi|284161832|ref|YP_003400455.1|	-	0.093	12.9	0.8	13	6.0	0.3	2.6	2	1	0	3	3	3	0	NusG	domain	II
T2SSF	PF00482.23	gi|284161834|ref|YP_003400457.1|	-	7e-37	126.2	10.8	2.7e-18	66.1	0.1	3.6	3	0	0	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
Phage_holin_3_6	PF07332.11	gi|284161834|ref|YP_003400457.1|	-	0.032	14.3	0.1	0.032	14.3	0.1	4.1	5	0	0	5	5	5	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
T2SSE	PF00437.20	gi|284161835|ref|YP_003400458.1|	-	1.2e-57	195.0	0.0	1.8e-57	194.5	0.0	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|284161835|ref|YP_003400458.1|	-	0.0072	16.1	0.0	0.015	15.0	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|284161835|ref|YP_003400458.1|	-	0.06	12.7	0.1	3.6	6.9	0.0	2.3	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
DUF4824	PF16106.5	gi|284161835|ref|YP_003400458.1|	-	0.079	12.2	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4824)
AAA_7	PF12775.7	gi|284161835|ref|YP_003400458.1|	-	0.083	12.4	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ATPase	PF06745.13	gi|284161836|ref|YP_003400459.1|	-	1e-08	34.9	0.0	1.8e-08	34.0	0.0	1.4	1	1	0	1	1	1	1	KaiC
Radical_SAM	PF04055.21	gi|284161837|ref|YP_003400460.1|	-	2.2e-20	73.7	0.0	3.7e-20	73.0	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|284161837|ref|YP_003400460.1|	-	5.4e-07	30.0	0.0	1.5e-06	28.6	0.0	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|284161837|ref|YP_003400460.1|	-	6.5e-07	29.7	0.0	1.4e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284161837|ref|YP_003400460.1|	-	0.00046	20.3	0.1	0.001	19.2	0.1	1.6	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
PrmA	PF06325.13	gi|284161838|ref|YP_003400461.1|	-	1.9e-13	50.5	0.2	2.5e-13	50.1	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|284161838|ref|YP_003400461.1|	-	1.4e-12	47.4	0.0	2e-12	47.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|284161838|ref|YP_003400461.1|	-	1e-09	38.9	0.0	1.8e-09	38.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284161838|ref|YP_003400461.1|	-	4.8e-08	32.9	0.0	7.8e-08	32.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284161838|ref|YP_003400461.1|	-	2.4e-06	28.1	0.0	3.9e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|284161838|ref|YP_003400461.1|	-	3.1e-06	27.0	0.1	7.4e-06	25.8	0.1	1.8	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_23	PF13489.6	gi|284161838|ref|YP_003400461.1|	-	7.5e-06	25.9	0.0	0.00011	22.1	0.0	2.0	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|284161838|ref|YP_003400461.1|	-	0.0003	20.4	0.0	0.00039	20.0	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
N6_N4_Mtase	PF01555.18	gi|284161838|ref|YP_003400461.1|	-	0.0014	18.4	0.0	0.0034	17.1	0.0	1.6	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_12	PF08242.12	gi|284161838|ref|YP_003400461.1|	-	0.0041	17.8	0.1	0.0083	16.9	0.1	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.6	gi|284161838|ref|YP_003400461.1|	-	0.017	15.1	0.0	0.022	14.7	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|284161838|ref|YP_003400461.1|	-	0.018	14.7	0.0	0.025	14.2	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
TehB	PF03848.14	gi|284161838|ref|YP_003400461.1|	-	0.025	14.0	0.1	0.049	13.0	0.1	1.6	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
Methyltransf_18	PF12847.7	gi|284161838|ref|YP_003400461.1|	-	0.031	14.2	0.0	0.093	12.7	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
RNA_pol_L_2	PF13656.6	gi|284161839|ref|YP_003400462.1|	-	1.8e-24	85.3	0.2	2e-24	85.2	0.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.24	gi|284161839|ref|YP_003400462.1|	-	3.5e-06	26.4	0.0	4.5e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
STT3	PF02516.14	gi|284161840|ref|YP_003400463.1|	-	7.8e-51	173.5	38.6	1.4e-50	172.7	33.6	2.3	2	0	0	2	2	2	2	Oligosaccharyl	transferase	STT3	subunit
AglB_L1	PF18079.1	gi|284161840|ref|YP_003400463.1|	-	1.6e-18	66.8	4.8	2.6e-18	66.1	4.8	1.4	1	0	0	1	1	1	1	Archaeal	glycosylation	protein	B	long	peripheral	domain
RIO1	PF01163.22	gi|284161841|ref|YP_003400464.1|	-	1e-38	132.8	0.2	1.6e-38	132.2	0.2	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.11	gi|284161841|ref|YP_003400464.1|	-	9.9e-10	38.5	0.1	1.9e-09	37.6	0.1	1.5	1	0	0	1	1	1	1	Rio2,	N-terminal
Kdo	PF06293.14	gi|284161841|ref|YP_003400464.1|	-	2.4e-05	23.8	0.0	0.00082	18.8	0.0	2.4	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.25	gi|284161841|ref|YP_003400464.1|	-	0.00027	20.4	0.3	0.0012	18.2	0.2	2.1	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.23	gi|284161841|ref|YP_003400464.1|	-	0.00032	20.7	0.0	0.00073	19.5	0.0	1.6	1	1	0	1	1	1	1	Phosphotransferase	enzyme	family
Choline_kinase	PF01633.20	gi|284161841|ref|YP_003400464.1|	-	0.0019	17.9	0.8	2.6	7.6	0.0	3.4	1	1	3	4	4	4	2	Choline/ethanolamine	kinase
Rrf2	PF02082.20	gi|284161841|ref|YP_003400464.1|	-	0.061	13.7	0.0	0.22	11.9	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
DUF5320	PF17253.2	gi|284161842|ref|YP_003400465.1|	-	1.5e-14	54.8	16.8	1.8e-14	54.6	16.8	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
DUF5320	PF17253.2	gi|284161843|ref|YP_003400466.1|	-	1e-09	39.4	0.0	1.2e-09	39.1	0.0	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
FlaC_arch	PF05377.11	gi|284161843|ref|YP_003400466.1|	-	0.0049	17.2	3.0	0.0062	16.9	3.0	1.1	1	0	0	1	1	1	1	Flagella	accessory	protein	C	(FlaC)
bZIP_1	PF00170.21	gi|284161843|ref|YP_003400466.1|	-	0.01	15.9	4.8	0.012	15.7	4.8	1.0	1	0	0	1	1	1	0	bZIP	transcription	factor
THOC7	PF05615.13	gi|284161843|ref|YP_003400466.1|	-	0.029	14.6	3.0	0.032	14.5	3.0	1.0	1	0	0	1	1	1	0	Tho	complex	subunit	7
KxDL	PF10241.9	gi|284161843|ref|YP_003400466.1|	-	0.056	13.7	0.3	0.067	13.5	0.3	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
Prefoldin_2	PF01920.20	gi|284161843|ref|YP_003400466.1|	-	0.064	13.2	7.2	0.075	13.0	7.2	1.0	1	0	0	1	1	1	0	Prefoldin	subunit
Es2	PF09751.9	gi|284161843|ref|YP_003400466.1|	-	0.067	12.9	0.3	0.072	12.8	0.3	1.0	1	0	0	1	1	1	0	Nuclear	protein	Es2
YojJ	PF10372.9	gi|284161843|ref|YP_003400466.1|	-	0.069	13.3	0.8	0.082	13.0	0.8	1.1	1	0	0	1	1	1	0	Bacterial	membrane-spanning	protein	N-terminus
YxiJ	PF14176.6	gi|284161843|ref|YP_003400466.1|	-	0.1	13.1	0.2	0.14	12.7	0.2	1.1	1	0	0	1	1	1	0	YxiJ-like	protein
BST2	PF16716.5	gi|284161843|ref|YP_003400466.1|	-	0.11	13.1	2.2	0.13	12.9	2.2	1.0	1	0	0	1	1	1	0	Bone	marrow	stromal	antigen	2
Pox_A_type_inc	PF04508.12	gi|284161843|ref|YP_003400466.1|	-	0.54	10.2	9.1	1.5	8.8	6.1	2.4	1	1	1	2	2	2	0	Viral	A-type	inclusion	protein	repeat
Ribosomal_S26e	PF01283.19	gi|284161844|ref|YP_003400467.1|	-	0.0028	18.1	2.6	0.017	15.6	2.6	1.9	1	1	0	1	1	1	1	Ribosomal	protein	S26e
zf-RING_7	PF02591.15	gi|284161844|ref|YP_003400467.1|	-	0.0043	17.2	0.7	0.06	13.6	0.2	2.2	2	0	0	2	2	2	1	C4-type	zinc	ribbon	domain
PHD	PF00628.29	gi|284161844|ref|YP_003400467.1|	-	0.0064	16.4	0.4	2.2	8.3	0.1	2.1	2	0	0	2	2	2	2	PHD-finger
DZR	PF12773.7	gi|284161844|ref|YP_003400467.1|	-	0.0073	16.3	0.1	1.6	8.8	0.0	2.1	2	0	0	2	2	2	2	Double	zinc	ribbon
Zn_ribbon_SprT	PF17283.2	gi|284161844|ref|YP_003400467.1|	-	0.011	15.7	1.7	0.078	12.9	0.2	2.2	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
C1_2	PF03107.16	gi|284161844|ref|YP_003400467.1|	-	0.024	14.9	0.4	1.8	8.9	0.1	2.1	2	0	0	2	2	2	0	C1	domain
Sgf11	PF08209.11	gi|284161844|ref|YP_003400467.1|	-	0.051	13.1	2.5	2.5	7.7	0.2	2.3	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Terminase_GpA	PF05876.12	gi|284161844|ref|YP_003400467.1|	-	0.075	11.6	0.0	0.085	11.4	0.0	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
zf-C2HC_2	PF13913.6	gi|284161844|ref|YP_003400467.1|	-	0.37	10.7	5.4	0.68	9.9	0.2	2.2	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
ThiF	PF00899.21	gi|284161845|ref|YP_003400468.1|	-	7.8e-65	218.6	0.0	9.6e-65	218.3	0.0	1.0	1	0	0	1	1	1	1	ThiF	family
Shikimate_DH	PF01488.20	gi|284161845|ref|YP_003400468.1|	-	0.00022	21.3	0.5	0.0005	20.1	0.3	1.6	1	1	1	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.6	gi|284161845|ref|YP_003400468.1|	-	0.0067	16.8	0.0	0.012	16.0	0.0	1.3	1	0	0	1	1	1	1	Putative	NAD(P)-binding
PglD_N	PF17836.1	gi|284161845|ref|YP_003400468.1|	-	0.014	16.0	3.5	0.035	14.8	2.0	2.1	1	1	1	2	2	2	0	PglD	N-terminal	domain
ELFV_dehydrog	PF00208.21	gi|284161845|ref|YP_003400468.1|	-	0.097	12.4	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|284161845|ref|YP_003400468.1|	-	0.27	11.5	3.2	0.94	9.7	3.2	1.8	1	1	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Gp_dh_C	PF02800.20	gi|284161846|ref|YP_003400469.1|	-	2.3e-31	108.5	0.1	3.3e-31	108.0	0.1	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|284161846|ref|YP_003400469.1|	-	5.7e-11	42.6	0.6	1.1e-10	41.7	0.4	1.6	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.24	gi|284161846|ref|YP_003400469.1|	-	4.5e-07	30.1	0.1	2e-06	28.1	0.1	2.2	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|284161846|ref|YP_003400469.1|	-	0.00023	20.6	0.5	0.017	14.5	0.1	3.0	2	1	1	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|284161846|ref|YP_003400469.1|	-	0.00087	19.6	0.1	0.0059	16.9	0.1	2.4	2	1	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_3	PF03447.16	gi|284161846|ref|YP_003400469.1|	-	0.0026	18.4	0.0	0.0081	16.8	0.0	1.9	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.24	gi|284161846|ref|YP_003400469.1|	-	0.0033	17.8	0.0	0.008	16.6	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|284161846|ref|YP_003400469.1|	-	0.0033	17.7	0.0	0.0096	16.2	0.0	1.8	1	0	0	1	1	1	1	TrkA-N	domain
PglD_N	PF17836.1	gi|284161846|ref|YP_003400469.1|	-	0.025	15.2	0.1	0.086	13.5	0.1	2.1	2	0	0	2	2	2	0	PglD	N-terminal	domain
F420_oxidored	PF03807.17	gi|284161846|ref|YP_003400469.1|	-	0.041	14.5	0.2	0.28	11.8	0.1	2.5	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|284161846|ref|YP_003400469.1|	-	0.093	13.6	0.0	0.24	12.2	0.0	1.7	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
TauE	PF01925.19	gi|284161847|ref|YP_003400470.1|	-	7.3e-40	137.1	27.4	8.5e-40	136.8	27.4	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF2244	PF10003.9	gi|284161847|ref|YP_003400470.1|	-	4.9	6.8	6.6	1.7	8.3	0.1	2.5	2	0	0	2	2	2	0	Integral	membrane	protein	(DUF2244)
Metallophos	PF00149.28	gi|284161848|ref|YP_003400471.1|	-	6.4e-09	36.6	1.2	2e-08	35.0	1.2	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|284161848|ref|YP_003400471.1|	-	5.7e-08	33.1	0.0	1e-07	32.3	0.0	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|284161848|ref|YP_003400471.1|	-	2.5e-06	27.0	0.3	1.2e-05	24.8	0.3	2.1	1	1	0	1	1	1	1	Metallophosphoesterase,	calcineurin	superfamily
DSRB	PF10781.9	gi|284161848|ref|YP_003400471.1|	-	0.041	13.5	0.0	0.11	12.1	0.0	1.8	1	0	0	1	1	1	0	Dextransucrase	DSRB
Zn_Tnp_IS1	PF03811.13	gi|284161852|ref|YP_003400475.1|	-	0.0024	17.6	0.2	0.004	16.9	0.2	1.4	1	0	0	1	1	1	1	InsA	N-terminal	domain
Zn-ribbon_8	PF09723.10	gi|284161852|ref|YP_003400475.1|	-	0.0098	16.0	1.1	0.014	15.5	1.1	1.4	1	1	0	1	1	1	1	Zinc	ribbon	domain
Ogr_Delta	PF04606.12	gi|284161852|ref|YP_003400475.1|	-	0.017	15.1	1.1	1.1	9.4	0.1	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
HypA	PF01155.19	gi|284161852|ref|YP_003400475.1|	-	0.034	14.2	0.0	0.034	14.2	0.0	1.0	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
PhnA_Zn_Ribbon	PF08274.12	gi|284161852|ref|YP_003400475.1|	-	0.037	14.0	0.5	0.048	13.6	0.1	1.5	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Mu-like_Com	PF10122.9	gi|284161852|ref|YP_003400475.1|	-	0.098	12.1	0.1	0.12	11.8	0.1	1.2	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
zf-H2C2_2	PF13465.6	gi|284161852|ref|YP_003400475.1|	-	0.23	12.0	4.4	1.5	9.4	1.3	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
Peptidase_M48	PF01435.18	gi|284161853|ref|YP_003400476.1|	-	3.8e-52	176.9	0.0	3.8e-52	176.9	0.0	2.0	2	0	0	2	2	2	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|284161853|ref|YP_003400476.1|	-	0.00022	20.5	0.6	0.00022	20.5	0.6	2.0	1	1	1	2	2	2	1	BlaR1	peptidase	M56
Phage_holin_4_2	PF04020.13	gi|284161853|ref|YP_003400476.1|	-	0.081	13.6	19.7	0.06	14.0	13.2	3.0	3	0	0	3	3	3	0	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
DUF2530	PF10745.9	gi|284161853|ref|YP_003400476.1|	-	4.3	7.7	10.0	0.68	10.2	1.5	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2530)
Radical_SAM_C	PF16199.5	gi|284161855|ref|YP_003400478.1|	-	1.1e-24	86.2	0.3	2.1e-24	85.3	0.3	1.5	1	0	0	1	1	1	1	Radical_SAM	C-terminal	domain
Radical_SAM	PF04055.21	gi|284161855|ref|YP_003400478.1|	-	3.8e-23	82.7	2.8	1.1e-22	81.1	0.1	3.0	4	1	0	4	4	4	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.25	gi|284161855|ref|YP_003400478.1|	-	1.9e-07	31.3	0.5	4.4e-07	30.2	0.5	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|284161855|ref|YP_003400478.1|	-	0.00037	20.4	0.3	0.00075	19.4	0.3	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
zinc_ribbon_5	PF13719.6	gi|284161855|ref|YP_003400478.1|	-	0.13	12.0	0.8	0.36	10.6	0.8	1.7	1	0	0	1	1	1	0	zinc-ribbon	domain
FbpA	PF05833.11	gi|284161856|ref|YP_003400479.1|	-	2.9e-78	263.7	10.3	6.3e-78	262.5	10.3	1.5	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|284161856|ref|YP_003400479.1|	-	5.6e-22	78.4	0.0	1.2e-21	77.3	0.0	1.6	1	0	0	1	1	1	1	NFACT	protein	RNA	binding	domain
H2TH	PF06831.14	gi|284161856|ref|YP_003400479.1|	-	0.00051	20.0	0.0	0.0015	18.5	0.0	1.8	1	0	0	1	1	1	1	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
NFACT-R_2	PF18297.1	gi|284161856|ref|YP_003400479.1|	-	0.0029	17.8	0.2	0.04	14.1	0.0	2.6	2	0	0	2	2	2	1	NFACT	protein	RNA	binding	domain
Ribosomal_S13	PF00416.22	gi|284161856|ref|YP_003400479.1|	-	0.0031	17.9	1.4	0.027	14.9	0.0	2.9	3	0	0	3	3	3	1	Ribosomal	protein	S13/S18
Exonuc_VII_L	PF02601.15	gi|284161856|ref|YP_003400479.1|	-	0.37	10.3	1.7	0.57	9.7	1.7	1.3	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF1664	PF07889.12	gi|284161856|ref|YP_003400479.1|	-	1.4	8.9	3.5	3.4	7.7	0.3	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1664)
V_ATPase_I	PF01496.19	gi|284161856|ref|YP_003400479.1|	-	2.8	5.8	6.8	3.9	5.3	6.8	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
HMGL-like	PF00682.19	gi|284161857|ref|YP_003400480.1|	-	4.9e-94	314.8	0.7	7.5e-94	314.2	0.7	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|284161857|ref|YP_003400480.1|	-	3.7e-34	117.5	2.2	3.7e-34	117.5	2.2	2.1	2	0	0	2	2	2	1	LeuA	allosteric	(dimerisation)	domain
NYN	PF01936.18	gi|284161858|ref|YP_003400481.1|	-	1e-23	84.4	0.4	1.4e-23	84.0	0.4	1.1	1	0	0	1	1	1	1	NYN	domain
REPA_OB_2	PF16900.5	gi|284161858|ref|YP_003400481.1|	-	0.022	14.7	0.7	6.1	6.8	0.0	2.2	2	0	0	2	2	2	0	Replication	protein	A	OB	domain
DUF4569	PF15133.6	gi|284161858|ref|YP_003400481.1|	-	0.12	12.1	0.0	0.14	11.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4569)
OMPdecase	PF00215.24	gi|284161859|ref|YP_003400482.1|	-	3.2e-36	125.0	0.3	6.5e-36	124.0	0.3	1.4	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
PcrB	PF01884.17	gi|284161859|ref|YP_003400482.1|	-	0.0019	17.7	0.6	0.046	13.2	0.1	2.2	1	1	0	2	2	2	1	PcrB	family
DUF3726	PF12525.8	gi|284161859|ref|YP_003400482.1|	-	0.086	12.9	0.1	2.2	8.4	0.0	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3726)
AAA_33	PF13671.6	gi|284161859|ref|YP_003400482.1|	-	0.2	11.8	0.0	0.32	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
TRAM	PF01938.20	gi|284161860|ref|YP_003400483.1|	-	2.7e-15	56.1	4.6	3e-15	56.0	4.6	1.0	1	0	0	1	1	1	1	TRAM	domain
Hexapep	PF00132.24	gi|284161860|ref|YP_003400483.1|	-	0.0065	16.2	0.9	0.013	15.2	0.6	1.6	2	0	0	2	2	2	1	Bacterial	transferase	hexapeptide	(six	repeats)
DUF308	PF03729.13	gi|284161861|ref|YP_003400484.1|	-	0.031	14.6	22.8	0.96	9.8	1.4	3.1	2	1	0	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
Tetraspanin	PF00335.20	gi|284161861|ref|YP_003400484.1|	-	1.4	8.6	14.1	3.7	7.2	14.2	1.7	1	1	0	1	1	1	0	Tetraspanin	family
MreB_Mbl	PF06723.13	gi|284161862|ref|YP_003400485.1|	-	2.7e-08	33.0	0.1	0.0018	17.1	0.0	2.3	3	0	0	3	3	3	2	MreB/Mbl	protein
FtsA	PF14450.6	gi|284161862|ref|YP_003400485.1|	-	0.0035	17.7	0.1	0.023	15.1	0.0	2.2	2	1	0	2	2	2	1	Cell	division	protein	FtsA
DDR	PF08841.10	gi|284161862|ref|YP_003400485.1|	-	0.093	11.7	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	Diol	dehydratase	reactivase	ATPase-like	domain
Rad60-SLD	PF11976.8	gi|284161863|ref|YP_003400486.1|	-	0.0043	16.8	0.0	0.0055	16.5	0.0	1.2	1	0	0	1	1	1	1	Ubiquitin-2	like	Rad60	SUMO-like
AAA	PF00004.29	gi|284161864|ref|YP_003400487.1|	-	7.9e-40	136.3	0.0	1.7e-39	135.3	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|284161864|ref|YP_003400487.1|	-	1.3e-08	35.2	0.0	3e-08	34.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|284161864|ref|YP_003400487.1|	-	5.3e-08	32.8	0.0	2.4e-07	30.6	0.0	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_lid_3	PF17862.1	gi|284161864|ref|YP_003400487.1|	-	6.3e-08	32.3	0.2	1.3e-07	31.3	0.2	1.5	1	0	0	1	1	1	1	AAA+	lid	domain
TIP49	PF06068.13	gi|284161864|ref|YP_003400487.1|	-	3.5e-07	29.8	0.0	6.1e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	TIP49	P-loop	domain
AAA_16	PF13191.6	gi|284161864|ref|YP_003400487.1|	-	2e-05	25.1	0.1	0.0044	17.4	0.0	2.5	2	1	1	3	3	2	1	AAA	ATPase	domain
DUF815	PF05673.13	gi|284161864|ref|YP_003400487.1|	-	7e-05	22.1	0.0	0.00017	20.8	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_5	PF07728.14	gi|284161864|ref|YP_003400487.1|	-	9.8e-05	22.4	0.0	0.00045	20.2	0.0	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|284161864|ref|YP_003400487.1|	-	0.0001	22.6	0.1	0.0021	18.3	0.0	2.5	2	1	0	3	3	2	1	AAA	domain
AAA_28	PF13521.6	gi|284161864|ref|YP_003400487.1|	-	0.00014	22.1	0.0	0.0025	18.1	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|284161864|ref|YP_003400487.1|	-	0.00022	20.7	0.0	0.00066	19.1	0.0	1.7	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|284161864|ref|YP_003400487.1|	-	0.0012	18.6	0.0	0.0022	17.8	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|284161864|ref|YP_003400487.1|	-	0.0014	18.8	0.0	0.0024	18.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|284161864|ref|YP_003400487.1|	-	0.0028	17.4	0.0	0.0054	16.5	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|284161864|ref|YP_003400487.1|	-	0.0032	18.0	0.0	0.0067	17.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_7	PF12775.7	gi|284161864|ref|YP_003400487.1|	-	0.0052	16.3	0.0	0.014	14.9	0.0	1.6	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
RNA_helicase	PF00910.22	gi|284161864|ref|YP_003400487.1|	-	0.02	15.3	0.0	0.043	14.2	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_17	PF13207.6	gi|284161864|ref|YP_003400487.1|	-	0.023	15.1	0.0	0.079	13.4	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
ANF_receptor	PF01094.28	gi|284161864|ref|YP_003400487.1|	-	0.024	13.7	0.0	1.1	8.3	0.0	2.1	1	1	1	2	2	2	0	Receptor	family	ligand	binding	region
Sigma54_activat	PF00158.26	gi|284161864|ref|YP_003400487.1|	-	0.026	14.2	0.0	0.075	12.7	0.0	1.8	2	1	0	2	2	1	0	Sigma-54	interaction	domain
AAA_11	PF13086.6	gi|284161864|ref|YP_003400487.1|	-	0.037	13.8	0.0	0.061	13.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Ribosomal_L7Ae	PF01248.26	gi|284161864|ref|YP_003400487.1|	-	0.038	13.7	0.8	0.21	11.3	0.0	2.4	3	0	0	3	3	3	0	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
TsaE	PF02367.17	gi|284161864|ref|YP_003400487.1|	-	0.047	13.7	0.0	0.11	12.5	0.0	1.6	1	1	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Parvo_NS1	PF01057.17	gi|284161864|ref|YP_003400487.1|	-	0.065	12.3	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
IPT	PF01745.16	gi|284161864|ref|YP_003400487.1|	-	0.092	12.1	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Isopentenyl	transferase
Bac_DnaA	PF00308.18	gi|284161864|ref|YP_003400487.1|	-	0.13	12.1	0.1	0.46	10.3	0.1	1.8	1	1	0	1	1	1	0	Bacterial	dnaA	protein
AAA_3	PF07726.11	gi|284161864|ref|YP_003400487.1|	-	0.15	12.0	0.0	0.31	10.9	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Torsin	PF06309.11	gi|284161864|ref|YP_003400487.1|	-	0.15	12.2	0.0	0.5	10.5	0.0	1.8	2	0	0	2	2	2	0	Torsin
AAA_25	PF13481.6	gi|284161864|ref|YP_003400487.1|	-	0.2	11.2	0.5	1.7	8.2	0.1	2.1	1	1	1	2	2	2	0	AAA	domain
Na_H_Exchanger	PF00999.21	gi|284161865|ref|YP_003400488.1|	-	1.3e-29	103.2	38.3	1.8e-29	102.7	38.3	1.2	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_C	PF02080.21	gi|284161866|ref|YP_003400489.1|	-	3.5e-19	68.4	0.2	6.2e-19	67.6	0.2	1.4	1	0	0	1	1	1	1	TrkA-C	domain
Castor_Poll_mid	PF06241.12	gi|284161866|ref|YP_003400489.1|	-	0.0012	18.8	0.0	0.0017	18.3	0.0	1.3	1	0	0	1	1	1	1	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
KH_1	PF00013.29	gi|284161866|ref|YP_003400489.1|	-	0.029	14.2	0.8	0.1	12.4	0.7	2.0	2	1	0	2	2	2	0	KH	domain
Phage_TAC_7	PF10109.9	gi|284161866|ref|YP_003400489.1|	-	0.035	14.2	0.0	0.077	13.1	0.0	1.6	2	0	0	2	2	2	0	Phage	tail	assembly	chaperone	proteins,	E,	or	41	or	14
SH3_2	PF07653.17	gi|284161866|ref|YP_003400489.1|	-	0.14	11.9	0.0	0.26	11.0	0.0	1.6	1	0	0	1	1	1	0	Variant	SH3	domain
DUF1115	PF06544.12	gi|284161866|ref|YP_003400489.1|	-	0.16	12.1	0.0	0.22	11.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1115)
DUF599	PF04654.12	gi|284161867|ref|YP_003400490.1|	-	3.2e-32	111.7	7.0	3.8e-32	111.4	7.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF599
NdhM	PF10664.9	gi|284161867|ref|YP_003400490.1|	-	0.08	13.2	0.0	0.18	12.1	0.0	1.5	1	0	0	1	1	1	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
ANT	PF03374.14	gi|284161867|ref|YP_003400490.1|	-	0.091	13.1	0.0	1	9.7	0.0	2.2	2	0	0	2	2	2	0	Phage	antirepressor	protein	KilAC	domain
Pribosyltran_N	PF13793.6	gi|284161868|ref|YP_003400491.1|	-	6.9e-25	87.3	0.4	3.6e-21	75.2	0.0	2.5	2	1	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|284161868|ref|YP_003400491.1|	-	1.3e-20	73.5	2.4	1.2e-19	70.4	1.2	2.5	2	1	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|284161868|ref|YP_003400491.1|	-	8.8e-09	35.6	2.1	2e-08	34.5	2.1	1.6	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|284161868|ref|YP_003400491.1|	-	1.4e-05	24.7	0.8	2.4e-05	23.9	0.8	1.4	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PduV-EutP	PF10662.9	gi|284161868|ref|YP_003400491.1|	-	0.0084	15.9	0.1	0.02	14.7	0.1	1.6	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
PRTase_2	PF15609.6	gi|284161868|ref|YP_003400491.1|	-	0.01	15.4	0.1	0.017	14.6	0.1	1.5	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Biotin_carb_N	PF00289.22	gi|284161868|ref|YP_003400491.1|	-	0.04	14.5	0.4	0.17	12.5	0.0	2.2	2	1	1	3	3	3	0	Biotin	carboxylase,	N-terminal	domain
DUF5619	PF18505.1	gi|284161869|ref|YP_003400492.1|	-	3.8e-21	74.9	0.0	5e-21	74.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5619)
tRNA-synt_2b	PF00587.25	gi|284161870|ref|YP_003400493.1|	-	5e-28	98.3	0.1	6.2e-26	91.5	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|284161870|ref|YP_003400493.1|	-	6.1e-19	68.0	0.1	1.9e-18	66.4	0.0	1.9	1	1	1	2	2	2	1	Anticodon	binding	domain
ATP_bind_3	PF01171.20	gi|284161871|ref|YP_003400494.1|	-	1.3e-12	47.8	0.0	2.1e-12	47.2	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.19	gi|284161871|ref|YP_003400494.1|	-	1.3e-05	25.3	0.0	3.4e-05	24.0	0.0	1.7	2	0	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
RecR	PF02132.15	gi|284161871|ref|YP_003400494.1|	-	6.4e-05	22.4	0.3	6.4e-05	22.4	0.3	3.2	4	0	0	4	4	4	1	RecR	protein
QueC	PF06508.13	gi|284161871|ref|YP_003400494.1|	-	0.00018	21.0	0.0	0.00034	20.2	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.17	gi|284161871|ref|YP_003400494.1|	-	0.0018	17.4	0.0	0.0029	16.8	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
ThiI	PF02568.14	gi|284161871|ref|YP_003400494.1|	-	0.002	17.8	1.0	0.0093	15.6	0.1	2.0	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.16	gi|284161871|ref|YP_003400494.1|	-	0.0088	14.9	0.1	0.016	14.0	0.0	1.4	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|284161871|ref|YP_003400494.1|	-	0.018	14.7	0.0	0.023	14.4	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
zn-ribbon_14	PF16503.5	gi|284161871|ref|YP_003400494.1|	-	0.067	12.7	4.2	0.76	9.3	1.1	2.5	2	0	0	2	2	2	0	Zinc-ribbon
Rhodanese	PF00581.20	gi|284161871|ref|YP_003400494.1|	-	0.13	12.8	0.0	0.28	11.7	0.0	1.5	1	0	0	1	1	1	0	Rhodanese-like	domain
PhnJ	PF06007.11	gi|284161871|ref|YP_003400494.1|	-	0.28	10.2	0.8	1.7	7.6	0.0	2.1	2	0	0	2	2	2	0	Phosphonate	metabolism	protein	PhnJ
KH_1	PF00013.29	gi|284161872|ref|YP_003400495.1|	-	2.6e-15	56.0	8.8	3e-09	36.6	1.8	2.6	3	0	0	3	3	3	2	KH	domain
KH_2	PF07650.17	gi|284161872|ref|YP_003400495.1|	-	1.6e-05	24.6	9.3	0.022	14.6	2.9	2.7	2	2	1	3	3	3	2	KH	domain
KH_4	PF13083.6	gi|284161872|ref|YP_003400495.1|	-	0.00012	21.8	5.9	0.098	12.6	0.3	3.1	3	1	0	3	3	3	2	KH	domain
KH_8	PF17903.1	gi|284161872|ref|YP_003400495.1|	-	0.0061	16.6	0.1	0.014	15.5	0.1	1.7	1	0	0	1	1	1	1	Krr1	KH1	domain
FKBP26_C	PF18046.1	gi|284161872|ref|YP_003400495.1|	-	0.07	13.2	0.6	0.54	10.4	0.0	2.6	1	1	3	4	4	4	0	FKBP26_C-terminal
DUF4180	PF13788.6	gi|284161872|ref|YP_003400495.1|	-	0.071	13.0	0.1	1.9	8.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4180)
KH_5	PF13184.6	gi|284161872|ref|YP_003400495.1|	-	0.075	13.1	4.9	3.9	7.6	1.2	2.6	2	0	0	2	2	2	0	NusA-like	KH	domain
BON	PF04972.17	gi|284161872|ref|YP_003400495.1|	-	0.12	12.7	0.5	0.37	11.1	0.1	1.9	2	0	0	2	2	2	0	BON	domain
RIO1	PF01163.22	gi|284161873|ref|YP_003400496.1|	-	7.8e-61	205.0	0.3	7.8e-61	205.0	0.3	1.4	2	0	0	2	2	2	1	RIO1	family
Pkinase_fungal	PF17667.1	gi|284161873|ref|YP_003400496.1|	-	1.5e-05	24.0	0.1	2.1e-05	23.5	0.1	1.2	1	0	0	1	1	1	1	Fungal	protein	kinase
Kdo	PF06293.14	gi|284161873|ref|YP_003400496.1|	-	0.00062	19.2	0.0	0.013	14.9	0.0	2.2	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.23	gi|284161873|ref|YP_003400496.1|	-	0.0093	15.9	0.0	0.17	11.8	0.0	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
POR	PF01558.18	gi|284161874|ref|YP_003400497.1|	-	7.2e-34	117.4	0.3	3e-33	115.4	0.3	1.7	1	1	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4_6	PF12837.7	gi|284161875|ref|YP_003400498.1|	-	4.7e-12	45.4	18.5	1.5e-06	28.0	3.7	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|284161875|ref|YP_003400498.1|	-	2.7e-11	42.8	20.2	3.8e-08	32.8	5.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284161875|ref|YP_003400498.1|	-	2.7e-10	40.2	12.4	3.7e-10	39.8	12.4	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161875|ref|YP_003400498.1|	-	1.5e-09	37.3	11.1	1.3e-05	25.0	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161875|ref|YP_003400498.1|	-	3.4e-08	34.0	13.7	5.6e-08	33.3	13.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161875|ref|YP_003400498.1|	-	9.9e-08	32.0	11.9	3.3e-05	23.9	1.4	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161875|ref|YP_003400498.1|	-	1.5e-06	28.2	13.0	3.1e-06	27.3	13.1	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284161875|ref|YP_003400498.1|	-	2e-06	28.6	13.4	0.0026	18.6	3.0	2.1	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|284161875|ref|YP_003400498.1|	-	7.1e-05	23.3	8.3	0.06	13.9	1.5	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284161875|ref|YP_003400498.1|	-	0.0079	16.6	19.0	0.029	14.9	4.2	2.4	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284161875|ref|YP_003400498.1|	-	0.0093	16.4	16.2	0.07	13.6	2.9	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284161875|ref|YP_003400498.1|	-	0.01	16.5	13.0	0.24	12.2	3.4	2.7	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|284161875|ref|YP_003400498.1|	-	0.041	14.7	13.2	0.26	12.2	3.8	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284161875|ref|YP_003400498.1|	-	0.058	13.9	13.4	0.22	12.1	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|284161875|ref|YP_003400498.1|	-	5.2	8.2	22.1	0.88	10.7	6.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR_N	PF01855.19	gi|284161876|ref|YP_003400499.1|	-	1.1e-67	228.2	0.4	1.4e-67	227.9	0.4	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|284161876|ref|YP_003400499.1|	-	2.5e-24	85.5	0.0	7.2e-24	84.1	0.0	1.8	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|284161876|ref|YP_003400499.1|	-	0.016	15.1	0.1	0.16	11.8	0.0	2.3	2	0	0	2	2	2	0	Transketolase,	C-terminal	domain
TPP_enzyme_C	PF02775.21	gi|284161877|ref|YP_003400500.1|	-	9.7e-20	70.9	0.6	1.6e-19	70.2	0.1	1.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|284161877|ref|YP_003400500.1|	-	0.025	13.8	0.0	0.033	13.4	0.0	1.1	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
BioW	PF03744.13	gi|284161877|ref|YP_003400500.1|	-	0.15	11.6	0.0	0.28	10.7	0.0	1.4	1	0	0	1	1	1	0	6-carboxyhexanoate--CoA	ligase
HMGL-like	PF00682.19	gi|284161878|ref|YP_003400501.1|	-	3.2e-78	262.9	1.0	3.2e-78	262.9	1.0	1.6	2	0	0	2	2	2	1	HMGL-like
LeuA_dimer	PF08502.10	gi|284161878|ref|YP_003400501.1|	-	1.7e-21	76.5	1.4	5e-10	39.4	0.2	3.3	3	1	1	4	4	4	2	LeuA	allosteric	(dimerisation)	domain
DUF4974	PF16344.5	gi|284161878|ref|YP_003400501.1|	-	0.013	15.4	0.0	0.49	10.4	0.0	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4974)
UPF0552	PF10574.9	gi|284161878|ref|YP_003400501.1|	-	0.024	14.0	0.0	0.19	11.0	0.0	2.1	2	0	0	2	2	2	0	Arp2/3-interacting	proteins	Arpin
NTP_transf_3	PF12804.7	gi|284161879|ref|YP_003400502.1|	-	7.4e-17	62.2	0.0	1.1e-16	61.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.23	gi|284161879|ref|YP_003400502.1|	-	6.5e-11	42.3	0.0	2.8e-09	36.9	0.0	2.1	2	0	0	2	2	2	1	Nucleotidyl	transferase
CDP-OH_P_transf	PF01066.21	gi|284161879|ref|YP_003400502.1|	-	4.7e-10	40.1	0.5	4.7e-10	40.1	0.5	3.1	3	1	0	3	3	3	1	CDP-alcohol	phosphatidyltransferase
IspD	PF01128.19	gi|284161879|ref|YP_003400502.1|	-	0.00015	21.6	0.0	0.00022	21.1	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Bystin	PF05291.11	gi|284161880|ref|YP_003400503.1|	-	0.045	13.1	0.0	0.045	13.1	0.0	1.1	1	0	0	1	1	1	0	Bystin
GST_C_6	PF17171.4	gi|284161880|ref|YP_003400503.1|	-	0.13	12.0	0.0	0.54	10.1	0.0	1.8	2	0	0	2	2	2	0	Glutathione	S-transferase,	C-terminal	domain
OrfB_Zn_ribbon	PF07282.11	gi|284161881|ref|YP_003400504.1|	-	3.2e-26	91.0	0.2	7.9e-26	89.8	0.2	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284161881|ref|YP_003400504.1|	-	1e-07	32.2	1.8	1e-07	32.2	1.8	2.1	2	0	0	2	2	2	1	Probable	transposase
RuvC_1	PF18516.1	gi|284161881|ref|YP_003400504.1|	-	0.0028	16.9	5.5	0.037	13.2	5.5	2.3	1	1	0	1	1	1	1	RuvC	nuclease	domain
zf-ribbon_3	PF13248.6	gi|284161881|ref|YP_003400504.1|	-	0.035	13.5	1.3	2.8	7.5	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
FYVE	PF01363.21	gi|284161881|ref|YP_003400504.1|	-	0.038	14.1	0.6	0.085	13.0	0.6	1.5	1	0	0	1	1	1	0	FYVE	zinc	finger
HypA	PF01155.19	gi|284161881|ref|YP_003400504.1|	-	0.068	13.2	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Auto_anti-p27	PF06677.12	gi|284161881|ref|YP_003400504.1|	-	0.071	13.3	1.7	0.4	10.9	2.3	1.9	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C2H2_3	PF13878.6	gi|284161881|ref|YP_003400504.1|	-	0.092	12.6	2.2	0.67	9.8	0.2	2.5	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zinc_ribbon_2	PF13240.6	gi|284161881|ref|YP_003400504.1|	-	0.094	12.5	2.9	3.9	7.3	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Phage_FRD3	PF05798.11	gi|284161881|ref|YP_003400504.1|	-	0.1	12.9	0.0	0.29	11.5	0.0	1.7	1	0	0	1	1	1	0	Bacteriophage	FRD3	protein
C1_2	PF03107.16	gi|284161881|ref|YP_003400504.1|	-	0.13	12.6	0.3	0.13	12.6	0.3	1.8	2	0	0	2	2	2	0	C1	domain
Rubredoxin_2	PF18073.1	gi|284161881|ref|YP_003400504.1|	-	4.8	7.0	5.4	44	3.9	5.4	2.4	1	1	0	1	1	1	0	Rubredoxin	metal	binding	domain
NTPase_I-T	PF01931.18	gi|284161882|ref|YP_003400505.1|	-	3.8e-51	173.1	0.0	4.3e-51	172.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
AAA	PF00004.29	gi|284161883|ref|YP_003400506.1|	-	3.6e-14	53.3	3.7	5.4e-14	52.7	0.0	3.0	4	0	0	4	4	4	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|284161883|ref|YP_003400506.1|	-	2.7e-07	30.7	1.3	7e-07	29.3	0.0	2.5	2	1	0	2	2	2	1	Rad17	P-loop	domain
DNA_pol3_delta	PF06144.13	gi|284161883|ref|YP_003400506.1|	-	1.1e-05	25.3	0.1	1.1e-05	25.3	0.1	2.2	3	0	0	3	3	3	1	DNA	polymerase	III,	delta	subunit
Zeta_toxin	PF06414.12	gi|284161883|ref|YP_003400506.1|	-	1.3e-05	24.6	1.2	0.12	11.6	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_5	PF07728.14	gi|284161883|ref|YP_003400506.1|	-	1.7e-05	24.8	0.0	7.3e-05	22.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|284161883|ref|YP_003400506.1|	-	1.8e-05	25.0	0.0	0.00054	20.3	0.0	3.0	2	1	0	2	2	2	1	AAA	domain
AAA_assoc_2	PF16193.5	gi|284161883|ref|YP_003400506.1|	-	2.3e-05	24.6	0.3	2.3e-05	24.6	0.3	2.3	2	0	0	2	2	2	1	AAA	C-terminal	domain
IstB_IS21	PF01695.17	gi|284161883|ref|YP_003400506.1|	-	2.7e-05	24.0	0.0	6.9e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
RuvB_N	PF05496.12	gi|284161883|ref|YP_003400506.1|	-	5.5e-05	23.0	0.0	0.00015	21.6	0.0	1.7	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_14	PF13173.6	gi|284161883|ref|YP_003400506.1|	-	0.00027	21.0	0.4	0.0016	18.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284161883|ref|YP_003400506.1|	-	0.00032	21.1	0.2	0.0012	19.3	0.2	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.6	gi|284161883|ref|YP_003400506.1|	-	0.0029	18.2	0.9	0.013	16.0	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|284161883|ref|YP_003400506.1|	-	0.023	14.9	0.2	0.14	12.3	0.0	2.4	2	1	1	3	3	3	0	AAA	domain
NACHT	PF05729.12	gi|284161883|ref|YP_003400506.1|	-	0.023	14.6	0.9	1.2	9.0	0.9	2.5	1	1	0	1	1	1	0	NACHT	domain
AAA_25	PF13481.6	gi|284161883|ref|YP_003400506.1|	-	0.03	13.9	0.2	0.09	12.3	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.6	gi|284161883|ref|YP_003400506.1|	-	0.067	13.4	2.9	0.083	13.1	0.0	2.5	3	0	0	3	3	3	0	AAA	domain
YpjP	PF14005.6	gi|284161883|ref|YP_003400506.1|	-	0.081	13.0	5.7	0.22	11.6	5.7	1.7	1	0	0	1	1	1	0	YpjP-like	protein
AAA_7	PF12775.7	gi|284161883|ref|YP_003400506.1|	-	0.088	12.3	0.0	0.21	11.1	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
CRISPR_Cas2	PF09827.9	gi|284161883|ref|YP_003400506.1|	-	0.19	11.9	5.6	3.2	8.0	0.5	3.6	3	0	0	3	3	3	0	CRISPR	associated	protein	Cas2
AAA_19	PF13245.6	gi|284161883|ref|YP_003400506.1|	-	0.33	11.3	1.0	2.3	8.6	0.2	2.6	2	1	0	2	2	2	0	AAA	domain
PIN_12	PF16289.5	gi|284161883|ref|YP_003400506.1|	-	1.5	9.3	14.5	0.38	11.2	10.4	2.2	2	0	0	2	2	2	0	PIN	domain
AAA_11	PF13086.6	gi|284161883|ref|YP_003400506.1|	-	4.5	7.0	0.0	4.5	7.0	0.0	2.8	2	1	0	2	2	1	0	AAA	domain
tRNA_lig_kinase	PF08303.11	gi|284161883|ref|YP_003400506.1|	-	5.5	7.0	0.0	5.5	7.0	0.0	4.4	4	1	0	4	4	4	0	tRNA	ligase	kinase	domain
Trm112p	PF03966.16	gi|284161884|ref|YP_003400507.1|	-	5.2e-12	46.2	1.3	9e-12	45.4	1.3	1.4	1	1	0	1	1	1	1	Trm112p-like	protein
Prim_Zn_Ribbon	PF08273.12	gi|284161884|ref|YP_003400507.1|	-	0.00019	21.6	0.0	0.00022	21.4	0.0	1.1	1	0	0	1	1	1	1	Zinc-binding	domain	of	primase-helicase
TF_Zn_Ribbon	PF08271.12	gi|284161884|ref|YP_003400507.1|	-	0.00071	19.0	3.5	0.0056	16.2	3.5	2.0	1	1	0	1	1	1	1	TFIIB	zinc-binding
Elf1	PF05129.13	gi|284161884|ref|YP_003400507.1|	-	0.0061	16.6	0.0	0.0065	16.5	0.0	1.1	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
zf-RRN7	PF11781.8	gi|284161884|ref|YP_003400507.1|	-	0.01	15.5	1.5	0.22	11.2	1.5	2.1	1	1	0	1	1	1	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Zn_ribbon_SprT	PF17283.2	gi|284161884|ref|YP_003400507.1|	-	0.012	15.5	0.8	1.7	8.6	0.2	2.1	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|284161884|ref|YP_003400507.1|	-	0.02	15.3	0.2	0.024	15.0	0.2	1.1	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Rubredoxin	PF00301.20	gi|284161884|ref|YP_003400507.1|	-	0.034	14.2	0.1	2.9	8.0	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
RNA_POL_M_15KD	PF02150.16	gi|284161884|ref|YP_003400507.1|	-	0.045	13.6	0.5	0.24	11.3	0.1	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-piccolo	PF05715.13	gi|284161884|ref|YP_003400507.1|	-	0.048	13.8	0.6	0.089	13.0	0.6	1.4	1	1	0	1	1	1	0	Piccolo	Zn-finger
zf-ribbon_3	PF13248.6	gi|284161884|ref|YP_003400507.1|	-	0.054	12.9	1.8	3	7.4	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2387	PF09526.10	gi|284161884|ref|YP_003400507.1|	-	0.058	13.6	0.1	0.062	13.5	0.1	1.2	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_4	PF13717.6	gi|284161884|ref|YP_003400507.1|	-	0.075	13.0	0.7	0.42	10.6	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Vps36-NZF-N	PF16988.5	gi|284161884|ref|YP_003400507.1|	-	0.079	12.4	0.3	0.12	11.8	0.3	1.3	1	0	0	1	1	1	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
Prok-RING_1	PF14446.6	gi|284161884|ref|YP_003400507.1|	-	0.17	11.8	3.6	1.5	8.8	3.6	1.9	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DUF1451	PF07295.11	gi|284161884|ref|YP_003400507.1|	-	0.41	10.7	1.8	0.63	10.1	0.1	1.8	1	1	0	2	2	2	0	Zinc-ribbon	containing	domain
CTP_synth_N	PF06418.14	gi|284161885|ref|YP_003400508.1|	-	1.8e-125	417.6	0.6	2.3e-125	417.2	0.6	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|284161885|ref|YP_003400508.1|	-	1.2e-57	194.8	0.0	2.1e-57	194.0	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|284161885|ref|YP_003400508.1|	-	1.3e-07	31.6	0.0	4.5e-07	29.8	0.0	1.8	1	1	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.23	gi|284161885|ref|YP_003400508.1|	-	4.4e-05	23.5	0.0	6e-05	23.1	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.15	gi|284161885|ref|YP_003400508.1|	-	0.026	13.7	0.0	0.074	12.2	0.0	1.7	1	1	1	2	2	2	0	Anion-transporting	ATPase
DHODB_Fe-S_bind	PF10418.9	gi|284161886|ref|YP_003400509.1|	-	4e-13	49.0	2.5	8.8e-13	47.8	2.5	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.21	gi|284161886|ref|YP_003400509.1|	-	1.9e-09	38.1	0.0	3e-08	34.3	0.0	2.2	1	1	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
NAD_binding_6	PF08030.12	gi|284161886|ref|YP_003400509.1|	-	0.17	12.0	2.7	2.3	8.3	0.0	2.6	1	1	1	3	3	3	0	Ferric	reductase	NAD	binding	domain
FlpD	PF02662.16	gi|284161887|ref|YP_003400510.1|	-	1.8e-35	121.6	0.2	1.6e-33	115.3	0.0	3.2	3	0	0	3	3	3	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Fer4	PF00037.27	gi|284161887|ref|YP_003400510.1|	-	1.9e-25	87.6	38.8	1.3e-06	28.0	3.2	4.8	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284161887|ref|YP_003400510.1|	-	3.4e-19	69.5	19.2	1.1e-05	26.3	0.2	4.7	4	0	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|284161887|ref|YP_003400510.1|	-	3.7e-19	67.9	38.1	6.6e-05	22.8	3.1	4.7	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284161887|ref|YP_003400510.1|	-	3.9e-19	69.0	26.3	4.3e-07	30.4	10.4	4.8	4	1	2	6	6	5	5	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284161887|ref|YP_003400510.1|	-	1.9e-15	56.7	32.8	2.2e-07	30.9	6.8	4.1	3	1	1	4	4	3	3	4Fe-4S	dicluster	domain
Pyr_redox_2	PF07992.14	gi|284161887|ref|YP_003400510.1|	-	4.2e-15	55.8	0.0	2.2e-13	50.1	0.0	2.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_21	PF14697.6	gi|284161887|ref|YP_003400510.1|	-	9.5e-15	54.5	23.4	2.6e-07	30.6	8.7	4.2	3	1	2	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284161887|ref|YP_003400510.1|	-	1.5e-13	50.6	33.7	1.1e-09	38.3	7.4	3.9	3	1	2	5	5	4	4	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284161887|ref|YP_003400510.1|	-	3.3e-13	50.0	22.4	0.0058	17.2	0.2	4.9	5	0	0	5	5	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284161887|ref|YP_003400510.1|	-	4.4e-13	48.5	41.6	3.3e-05	23.7	3.6	5.1	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284161887|ref|YP_003400510.1|	-	2e-12	47.4	23.1	6e-07	29.8	8.4	4.4	3	1	1	4	4	4	4	4Fe-4S	dicluster	domain
DAO	PF01266.24	gi|284161887|ref|YP_003400510.1|	-	4.5e-08	33.1	0.9	0.0002	21.1	0.5	3.2	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|284161887|ref|YP_003400510.1|	-	6.2e-08	31.8	0.2	0.0008	18.2	0.2	3.0	3	0	0	3	3	3	2	HI0933-like	protein
Pyr_redox	PF00070.27	gi|284161887|ref|YP_003400510.1|	-	6.9e-08	32.9	2.9	2e-06	28.2	0.3	3.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|284161887|ref|YP_003400510.1|	-	2.5e-07	30.8	0.1	6.4e-07	29.5	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_18	PF13746.6	gi|284161887|ref|YP_003400510.1|	-	6e-07	29.6	13.4	0.049	13.8	0.1	3.6	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
FAD_oxidored	PF12831.7	gi|284161887|ref|YP_003400510.1|	-	6.9e-07	29.0	0.1	1.1e-06	28.4	0.1	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer4_4	PF12800.7	gi|284161887|ref|YP_003400510.1|	-	7.7e-07	29.1	40.4	0.049	14.2	1.4	5.1	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|284161887|ref|YP_003400510.1|	-	4.6e-06	27.4	20.0	0.015	16.1	0.1	4.6	3	1	1	4	4	4	1	4Fe-4S	dicluster	domain
Pyr_redox_3	PF13738.6	gi|284161887|ref|YP_003400510.1|	-	3.9e-05	23.1	1.4	0.077	12.2	0.3	3.4	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|284161887|ref|YP_003400510.1|	-	4.5e-05	22.7	0.6	7.8e-05	21.9	0.6	1.3	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.22	gi|284161887|ref|YP_003400510.1|	-	9.9e-05	21.6	0.2	0.00022	20.5	0.2	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.6	gi|284161887|ref|YP_003400510.1|	-	0.00012	22.1	0.3	0.54	10.2	0.2	2.8	2	0	0	2	2	2	2	FAD-NAD(P)-binding
Amino_oxidase	PF01593.24	gi|284161887|ref|YP_003400510.1|	-	0.00016	21.1	0.0	0.021	14.2	0.0	3.0	2	1	0	3	3	3	1	Flavin	containing	amine	oxidoreductase
FAD_binding_3	PF01494.19	gi|284161887|ref|YP_003400510.1|	-	0.00026	20.4	0.1	0.00046	19.5	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|284161887|ref|YP_003400510.1|	-	0.00044	19.6	0.0	0.00083	18.7	0.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_13	PF13370.6	gi|284161887|ref|YP_003400510.1|	-	0.00076	20.0	30.0	0.52	10.9	4.0	4.6	4	0	0	4	4	4	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Trp_halogenase	PF04820.14	gi|284161887|ref|YP_003400510.1|	-	0.0049	15.8	0.1	0.59	8.9	0.2	2.4	2	0	0	2	2	2	1	Tryptophan	halogenase
Fer4_15	PF13459.6	gi|284161887|ref|YP_003400510.1|	-	0.0054	17.4	21.3	1.3	9.8	0.3	4.7	3	1	1	4	4	4	2	4Fe-4S	single	cluster	domain
NAD_binding_7	PF13241.6	gi|284161887|ref|YP_003400510.1|	-	0.012	16.0	0.1	0.083	13.3	0.0	2.5	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Fer4_3	PF12798.7	gi|284161887|ref|YP_003400510.1|	-	0.015	16.2	55.9	0.036	15.0	5.9	5.7	5	0	0	5	5	4	0	4Fe-4S	binding	domain
Lycopene_cycl	PF05834.12	gi|284161887|ref|YP_003400510.1|	-	0.023	13.8	0.6	0.055	12.5	0.4	1.7	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|284161887|ref|YP_003400510.1|	-	0.062	12.5	0.1	0.14	11.4	0.1	1.5	1	0	0	1	1	1	0	Thi4	family
LysE	PF01810.18	gi|284161888|ref|YP_003400511.1|	-	2.9e-35	121.5	13.0	3.4e-35	121.3	13.0	1.0	1	0	0	1	1	1	1	LysE	type	translocator
DUF308	PF03729.13	gi|284161888|ref|YP_003400511.1|	-	0.0002	21.6	0.9	0.0002	21.6	0.9	3.0	2	1	2	4	4	4	2	Short	repeat	of	unknown	function	(DUF308)
Flp1_like	PF16982.5	gi|284161888|ref|YP_003400511.1|	-	0.02	14.3	0.7	0.039	13.4	0.7	1.4	1	0	0	1	1	1	0	Putative	Flagellin,	Flp1-like,	domain
DUF3185	PF11381.8	gi|284161888|ref|YP_003400511.1|	-	0.097	12.7	3.4	0.62	10.1	0.0	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
UbiA	PF01040.18	gi|284161889|ref|YP_003400512.1|	-	3.8e-39	134.5	8.8	4.1e-39	134.4	8.4	1.2	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
CN_hydrolase	PF00795.22	gi|284161890|ref|YP_003400513.1|	-	6e-43	147.1	0.0	6.8e-43	146.9	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
EFG_II	PF14492.6	gi|284161890|ref|YP_003400513.1|	-	0.069	13.3	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	Elongation	Factor	G,	domain	II
MFS_1	PF07690.16	gi|284161891|ref|YP_003400514.1|	-	1.8e-22	79.8	31.9	1.3e-13	50.7	9.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PHO4	PF01384.20	gi|284161891|ref|YP_003400514.1|	-	5.2	6.0	12.7	2.3	7.2	7.2	2.1	2	0	0	2	2	2	0	Phosphate	transporter	family
HTH_24	PF13412.6	gi|284161892|ref|YP_003400515.1|	-	1.4e-10	40.6	2.6	1.4e-10	40.6	2.6	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|284161892|ref|YP_003400515.1|	-	1.7e-10	40.7	0.3	2.9e-10	39.9	0.3	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|284161892|ref|YP_003400515.1|	-	7.3e-07	29.0	0.3	1.3e-06	28.2	0.0	1.4	2	0	0	2	2	1	1	MarR	family
B-block_TFIIIC	PF04182.12	gi|284161892|ref|YP_003400515.1|	-	2.8e-06	27.4	0.0	3.8e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
TrmB	PF01978.19	gi|284161892|ref|YP_003400515.1|	-	4.2e-06	26.5	0.1	8.8e-06	25.5	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|284161892|ref|YP_003400515.1|	-	1.4e-05	24.9	0.3	2.6e-05	24.0	0.3	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.6	gi|284161892|ref|YP_003400515.1|	-	0.00012	22.5	0.2	0.00023	21.6	0.2	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.19	gi|284161892|ref|YP_003400515.1|	-	0.00082	19.5	0.0	0.0016	18.6	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TFIIE_alpha	PF02002.17	gi|284161892|ref|YP_003400515.1|	-	0.0011	18.8	2.6	0.0024	17.7	2.6	1.7	1	1	0	1	1	1	1	TFIIE	alpha	subunit
DUF2250	PF10007.9	gi|284161892|ref|YP_003400515.1|	-	0.0021	18.1	0.2	0.0049	16.9	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_Crp_2	PF13545.6	gi|284161892|ref|YP_003400515.1|	-	0.003	17.5	0.1	0.006	16.5	0.1	1.5	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.7	gi|284161892|ref|YP_003400515.1|	-	0.0031	17.5	0.4	0.0058	16.7	0.1	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_micro	PF17007.5	gi|284161892|ref|YP_003400515.1|	-	0.0084	15.0	0.7	0.0098	14.8	0.7	1.1	1	0	0	1	1	1	1	HTH-like
HTH_IclR	PF09339.10	gi|284161892|ref|YP_003400515.1|	-	0.0085	15.9	0.1	0.077	12.8	0.0	2.0	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_34	PF13601.6	gi|284161892|ref|YP_003400515.1|	-	0.014	15.6	0.0	0.021	15.0	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
BAR_2	PF10455.9	gi|284161892|ref|YP_003400515.1|	-	0.019	14.1	0.0	0.044	12.9	0.0	1.6	1	1	1	2	2	2	0	Bin/amphiphysin/Rvs	domain	for	vesicular	trafficking
Peptidase_S66C	PF17676.1	gi|284161892|ref|YP_003400515.1|	-	0.024	15.2	0.0	0.03	14.8	0.0	1.2	1	0	0	1	1	1	0	LD-carboxypeptidase	C-terminal	domain
Ribosomal_S25	PF03297.15	gi|284161892|ref|YP_003400515.1|	-	0.039	14.2	0.1	0.062	13.5	0.1	1.4	1	0	0	1	1	1	0	S25	ribosomal	protein
Rrf2	PF02082.20	gi|284161892|ref|YP_003400515.1|	-	0.041	14.2	0.5	0.12	12.8	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
ENT	PF03735.14	gi|284161892|ref|YP_003400515.1|	-	0.086	12.9	0.8	0.18	11.9	0.8	1.6	1	0	0	1	1	1	0	ENT	domain
RNA_pol_Rpc34	PF05158.12	gi|284161892|ref|YP_003400515.1|	-	0.088	12.2	0.3	0.1	12.0	0.3	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
HTH_12	PF08461.10	gi|284161892|ref|YP_003400515.1|	-	0.095	12.7	3.4	0.22	11.5	2.1	2.2	2	1	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
F-112	PF09645.10	gi|284161892|ref|YP_003400515.1|	-	0.11	12.6	0.4	0.16	12.0	0.4	1.3	1	0	0	1	1	1	0	F-112	protein
HTH_39	PF14090.6	gi|284161892|ref|YP_003400515.1|	-	0.15	11.9	0.1	0.8	9.5	0.1	2.0	1	1	1	2	2	2	0	Helix-turn-helix	domain
BLACT_WH	PF17778.1	gi|284161892|ref|YP_003400515.1|	-	0.17	11.9	0.1	0.17	11.9	0.1	2.0	2	0	0	2	2	2	0	Beta-lactamase	associated	winged	helix	domain
LSM	PF01423.22	gi|284161893|ref|YP_003400516.1|	-	4.5e-19	67.9	2.6	5e-19	67.8	2.6	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|284161893|ref|YP_003400516.1|	-	0.022	14.9	0.1	0.025	14.7	0.1	1.1	1	0	0	1	1	1	0	Ataxin	2	SM	domain
Epimerase	PF01370.21	gi|284161894|ref|YP_003400517.1|	-	4.6e-59	199.8	0.1	5.4e-59	199.6	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|284161894|ref|YP_003400517.1|	-	1.1e-55	189.4	0.1	9e-55	186.4	0.1	1.9	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|284161894|ref|YP_003400517.1|	-	2.7e-20	72.5	0.3	3.7e-20	72.1	0.3	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|284161894|ref|YP_003400517.1|	-	3.3e-20	72.4	0.0	4.2e-20	72.0	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|284161894|ref|YP_003400517.1|	-	3.5e-20	72.3	0.1	2.9e-19	69.3	0.1	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|284161894|ref|YP_003400517.1|	-	1.2e-10	41.0	0.3	2.1e-06	27.1	0.1	2.7	2	1	0	2	2	2	2	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|284161894|ref|YP_003400517.1|	-	8.5e-10	38.8	0.0	1.2e-09	38.3	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|284161894|ref|YP_003400517.1|	-	1.3e-06	28.0	0.1	3.2e-05	23.5	0.1	2.3	1	1	0	1	1	1	1	short	chain	dehydrogenase
LpxI_N	PF17930.1	gi|284161894|ref|YP_003400517.1|	-	1e-05	25.5	0.0	0.00019	21.3	0.0	2.3	1	1	1	2	2	2	1	LpxI	N-terminal	domain
KR	PF08659.10	gi|284161894|ref|YP_003400517.1|	-	0.0014	18.6	0.0	0.012	15.5	0.0	2.1	1	1	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|284161894|ref|YP_003400517.1|	-	0.0065	16.0	0.0	0.014	15.0	0.0	1.5	1	1	0	1	1	1	1	NmrA-like	family
PBECR3	PF18812.1	gi|284161894|ref|YP_003400517.1|	-	0.022	14.7	1.6	0.24	11.4	0.1	2.4	2	1	0	2	2	2	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease3
Glyco_trans_4_2	PF13477.6	gi|284161894|ref|YP_003400517.1|	-	0.047	13.7	0.0	0.093	12.8	0.0	1.6	1	1	0	1	1	1	0	Glycosyl	transferase	4-like
3HCDH_N	PF02737.18	gi|284161894|ref|YP_003400517.1|	-	0.05	13.5	0.0	0.093	12.6	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|284161894|ref|YP_003400517.1|	-	0.14	12.4	0.0	0.26	11.5	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
HTH_45	PF14947.6	gi|284161895|ref|YP_003400518.1|	-	3.2e-24	84.7	1.6	3.4e-24	84.6	1.6	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|284161895|ref|YP_003400518.1|	-	1.1e-05	25.2	0.2	1.3e-05	25.0	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.19	gi|284161895|ref|YP_003400518.1|	-	0.00064	19.6	0.1	0.0009	19.1	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1495	PF07381.11	gi|284161895|ref|YP_003400518.1|	-	0.011	15.6	0.1	0.014	15.2	0.1	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
DUF4423	PF14394.6	gi|284161895|ref|YP_003400518.1|	-	0.075	12.7	0.0	0.082	12.6	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_45	PF14947.6	gi|284161896|ref|YP_003400519.1|	-	0.00083	19.3	0.0	0.001	19.0	0.0	1.3	1	1	0	1	1	1	1	Winged	helix-turn-helix
DUF1102	PF06510.11	gi|284161897|ref|YP_003400520.1|	-	7e-55	185.1	0.1	8.3e-55	184.8	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1102)
T6SS-SciN	PF12790.7	gi|284161897|ref|YP_003400520.1|	-	0.037	13.8	0.0	0.11	12.3	0.0	1.7	2	0	0	2	2	2	0	Type	VI	secretion	lipoprotein,	VasD,	EvfM,	TssJ,	VC_A0113
Peptidase_M73	PF12389.8	gi|284161897|ref|YP_003400520.1|	-	0.068	13.0	0.0	0.13	12.1	0.0	1.5	1	0	0	1	1	1	0	Camelysin	metallo-endopeptidase
DUF1102	PF06510.11	gi|284161898|ref|YP_003400521.1|	-	2.4e-66	222.3	2.0	2.9e-66	222.0	2.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1102)
DUF1102	PF06510.11	gi|284161899|ref|YP_003400522.1|	-	2.6e-45	154.1	6.3	3.2e-45	153.8	6.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1102)
Peptidase_S24	PF00717.23	gi|284161900|ref|YP_003400523.1|	-	2.7e-14	52.8	0.0	1e-13	51.0	0.0	2.0	2	0	0	2	2	2	1	Peptidase	S24-like
TctB	PF07331.11	gi|284161900|ref|YP_003400523.1|	-	1.1	9.5	6.9	0.32	11.3	0.5	2.5	3	0	0	3	3	3	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF11	PF01345.18	gi|284161901|ref|YP_003400524.1|	-	0.0061	16.8	1.0	0.032	14.5	0.0	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF11
DUF4352	PF11611.8	gi|284161901|ref|YP_003400524.1|	-	0.068	13.4	0.1	0.19	12.0	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4352)
PmbA_TldD	PF01523.16	gi|284161903|ref|YP_003400526.1|	-	2.4e-46	158.9	0.1	3e-46	158.5	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PMT_2	PF13231.6	gi|284161904|ref|YP_003400527.1|	-	3.9e-17	62.9	13.1	3.9e-17	62.9	13.1	2.6	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.18	gi|284161904|ref|YP_003400527.1|	-	1.6e-08	34.5	12.1	1.6e-08	34.5	12.1	2.5	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
MerC	PF03203.14	gi|284161904|ref|YP_003400527.1|	-	0.34	11.4	13.5	0.064	13.7	3.2	3.4	2	2	1	3	3	3	0	MerC	mercury	resistance	protein
MCM	PF00493.23	gi|284161905|ref|YP_003400528.1|	-	1.7e-77	259.5	0.6	3.1e-31	108.2	0.0	3.6	3	0	0	3	3	3	3	MCM	P-loop	domain
LAGLIDADG_3	PF14528.6	gi|284161905|ref|YP_003400528.1|	-	2.4e-55	184.8	8.3	5.1e-22	78.0	0.3	5.3	4	0	0	4	4	4	4	LAGLIDADG-like	domain
Intein_splicing	PF14890.6	gi|284161905|ref|YP_003400528.1|	-	1.5e-42	144.7	11.5	2.3e-24	85.9	1.0	3.3	3	0	0	3	3	3	2	Intein	splicing	domain
MCM_OB	PF17207.3	gi|284161905|ref|YP_003400528.1|	-	1.1e-27	96.4	0.1	6.4e-27	93.9	0.0	2.2	2	0	0	2	2	2	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|284161905|ref|YP_003400528.1|	-	1.5e-23	83.0	2.8	5.1e-23	81.3	2.8	2.0	1	0	0	1	1	1	1	MCM	AAA-lid	domain
LAGLIDADG_WhiA	PF14527.6	gi|284161905|ref|YP_003400528.1|	-	1.4e-07	31.5	5.0	0.059	13.4	0.0	5.1	6	0	0	6	6	5	2	WhiA	LAGLIDADG-like	domain
Hom_end	PF05204.14	gi|284161905|ref|YP_003400528.1|	-	2.4e-05	24.4	0.1	0.31	11.2	0.0	4.8	5	0	0	5	5	5	1	Homing	endonuclease
HTH_30	PF13556.6	gi|284161905|ref|YP_003400528.1|	-	9.8e-05	22.1	3.0	0.028	14.2	0.1	3.7	4	0	0	4	4	4	1	PucR	C-terminal	helix-turn-helix	domain
HTH_3	PF01381.22	gi|284161905|ref|YP_003400528.1|	-	0.00015	21.7	0.0	0.13	12.3	0.0	3.3	2	0	0	2	2	2	1	Helix-turn-helix
HTH_8	PF02954.19	gi|284161905|ref|YP_003400528.1|	-	0.0019	17.9	1.8	0.0041	16.9	0.6	2.3	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	Fis	family
Band_7	PF01145.25	gi|284161905|ref|YP_003400528.1|	-	0.0025	17.8	2.5	0.0048	16.9	0.0	2.6	3	0	0	3	3	2	1	SPFH	domain	/	Band	7	family
HTH_19	PF12844.7	gi|284161905|ref|YP_003400528.1|	-	0.0034	17.4	0.0	0.55	10.3	0.0	4.0	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_10	PF04967.12	gi|284161905|ref|YP_003400528.1|	-	0.0043	16.8	2.6	0.057	13.2	0.0	3.7	3	0	0	3	3	2	1	HTH	DNA	binding	domain
WhiA_N	PF10298.9	gi|284161905|ref|YP_003400528.1|	-	0.0075	16.3	0.0	0.067	13.2	0.0	2.8	2	0	0	2	2	1	1	WhiA	N-terminal	LAGLIDADG-like	domain
ADK_lid	PF05191.14	gi|284161905|ref|YP_003400528.1|	-	0.015	15.2	1.6	0.042	13.8	1.1	2.0	2	0	0	2	2	1	0	Adenylate	kinase,	active	site	lid
Hint	PF01079.20	gi|284161905|ref|YP_003400528.1|	-	0.022	14.2	0.0	0.22	11.0	0.0	2.2	2	0	0	2	2	2	0	Hint	module
HTH_23	PF13384.6	gi|284161905|ref|YP_003400528.1|	-	0.028	14.2	0.8	3.6	7.5	0.0	4.4	5	0	0	5	5	4	0	Homeodomain-like	domain
AbiEi_4	PF13338.6	gi|284161905|ref|YP_003400528.1|	-	0.044	13.9	0.7	10	6.4	0.0	4.0	4	0	0	4	4	3	0	Transcriptional	regulator,	AbiEi	antitoxin
HTH_1	PF00126.27	gi|284161905|ref|YP_003400528.1|	-	0.059	13.3	0.0	5.9	6.9	0.0	2.8	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Zn_Tnp_IS1595	PF12760.7	gi|284161905|ref|YP_003400528.1|	-	0.087	12.8	1.9	0.17	11.9	1.1	1.9	2	0	0	2	2	1	0	Transposase	zinc-ribbon	domain
Endonuc_subdom	PF09062.10	gi|284161905|ref|YP_003400528.1|	-	0.087	13.7	0.1	51	4.8	0.0	3.8	2	0	0	2	2	2	0	PI-PfuI	Endonuclease	subdomain
YacG	PF03884.14	gi|284161905|ref|YP_003400528.1|	-	0.095	12.4	0.7	0.2	11.4	0.7	1.5	1	0	0	1	1	1	0	DNA	gyrase	inhibitor	YacG
MerR_1	PF13411.6	gi|284161905|ref|YP_003400528.1|	-	0.1	12.7	0.0	0.44	10.7	0.0	2.2	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Mg_chelatase	PF01078.21	gi|284161905|ref|YP_003400528.1|	-	0.1	12.0	0.0	6.5	6.1	0.0	3.1	3	0	0	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|284161905|ref|YP_003400528.1|	-	0.11	12.2	0.0	0.48	10.1	0.0	2.1	2	0	0	2	2	2	0	Sigma-54	interaction	domain
L31	PF09784.9	gi|284161905|ref|YP_003400528.1|	-	0.26	11.7	5.2	0.1	13.0	0.5	2.9	3	0	0	3	3	1	0	Mitochondrial	ribosomal	protein	L31
DUF1967	PF09269.11	gi|284161905|ref|YP_003400528.1|	-	0.39	10.7	5.5	0.6	10.1	0.0	3.9	4	0	0	4	4	2	0	Domain	of	unknown	function	(DUF1967)
DUF2089	PF09862.9	gi|284161905|ref|YP_003400528.1|	-	0.53	10.3	3.9	1.4	9.0	0.2	3.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2089)
DUF2892	PF11127.8	gi|284161906|ref|YP_003400529.1|	-	0.038	14.0	6.0	0.042	13.9	6.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
Col_cuticle_N	PF01484.17	gi|284161906|ref|YP_003400529.1|	-	4.7	7.4	5.8	0.51	10.4	0.4	1.8	2	0	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
ATP1G1_PLM_MAT8	PF02038.16	gi|284161906|ref|YP_003400529.1|	-	10	5.7	7.1	2	7.9	2.1	1.9	1	1	1	2	2	2	0	ATP1G1/PLM/MAT8	family
Aconitase	PF00330.20	gi|284161907|ref|YP_003400530.1|	-	2.6e-95	320.2	0.8	3.4e-93	313.2	0.8	2.3	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|284161907|ref|YP_003400530.1|	-	2.2e-05	23.4	0.0	3.3e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
tRNA-synt_2b	PF00587.25	gi|284161908|ref|YP_003400531.1|	-	2.2e-38	132.0	0.0	2.2e-37	128.8	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|284161908|ref|YP_003400531.1|	-	9.5e-22	77.3	13.5	1.7e-21	76.5	13.5	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
IBB	PF01749.20	gi|284161908|ref|YP_003400531.1|	-	0.00027	21.3	2.9	0.00059	20.2	2.9	1.5	1	0	0	1	1	1	1	Importin	beta	binding	domain
CREPT	PF16566.5	gi|284161908|ref|YP_003400531.1|	-	0.00034	20.8	3.2	0.00057	20.1	3.2	1.3	1	0	0	1	1	1	1	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
OmpH	PF03938.14	gi|284161908|ref|YP_003400531.1|	-	0.029	14.7	5.2	0.052	13.9	5.2	1.4	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF3375	PF11855.8	gi|284161908|ref|YP_003400531.1|	-	0.031	13.2	0.8	0.046	12.7	0.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
HAUS2	PF15003.6	gi|284161908|ref|YP_003400531.1|	-	0.041	13.6	2.7	3.9	7.2	0.0	2.2	2	0	0	2	2	2	0	HAUS	augmin-like	complex	subunit	2
Baculo_PEP_C	PF04513.12	gi|284161908|ref|YP_003400531.1|	-	0.077	13.0	0.3	0.15	12.1	0.3	1.4	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Ppx-GppA	PF02541.16	gi|284161908|ref|YP_003400531.1|	-	0.089	12.2	0.2	8.7	5.7	0.5	2.2	2	0	0	2	2	2	0	Ppx/GppA	phosphatase	family
ICA69	PF04629.14	gi|284161908|ref|YP_003400531.1|	-	0.24	11.7	1.8	0.34	11.2	1.8	1.2	1	0	0	1	1	1	0	Islet	cell	autoantigen	ICA69,	C-terminal	domain
Latarcin	PF10279.9	gi|284161908|ref|YP_003400531.1|	-	0.25	11.8	5.1	0.75	10.2	5.1	1.9	1	0	0	1	1	1	0	Latarcin	precursor
DUF2203	PF09969.9	gi|284161908|ref|YP_003400531.1|	-	0.38	11.5	2.5	0.85	10.3	2.5	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
TMPIT	PF07851.13	gi|284161908|ref|YP_003400531.1|	-	0.92	8.7	2.8	1.5	8.0	2.8	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
CENP-H	PF05837.12	gi|284161908|ref|YP_003400531.1|	-	1.4	9.3	7.1	3.2	8.2	7.1	1.5	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
DivIC	PF04977.15	gi|284161908|ref|YP_003400531.1|	-	2.4	8.0	8.0	5	7.0	8.0	1.5	1	0	0	1	1	1	0	Septum	formation	initiator
FemAB	PF02388.16	gi|284161908|ref|YP_003400531.1|	-	3.9	6.2	6.3	6.9	5.4	6.3	1.3	1	0	0	1	1	1	0	FemAB	family
SIR2	PF02146.17	gi|284161909|ref|YP_003400532.1|	-	2.3e-56	190.5	0.0	2.9e-56	190.2	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.22	gi|284161909|ref|YP_003400532.1|	-	3.9e-05	23.4	0.0	0.031	14.0	0.0	2.2	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	central	domain
Zn-ribbon_8	PF09723.10	gi|284161909|ref|YP_003400532.1|	-	0.0045	17.1	0.1	0.0078	16.3	0.1	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
HypA	PF01155.19	gi|284161909|ref|YP_003400532.1|	-	0.0063	16.5	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
XPG_I	PF00867.18	gi|284161909|ref|YP_003400532.1|	-	0.093	13.1	0.0	0.17	12.3	0.0	1.4	1	0	0	1	1	1	0	XPG	I-region
ADK_lid	PF05191.14	gi|284161909|ref|YP_003400532.1|	-	0.14	12.1	0.8	0.32	11.0	0.8	1.5	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
DNA_RNApol_7kD	PF03604.13	gi|284161909|ref|YP_003400532.1|	-	0.22	11.2	2.4	0.57	9.9	2.4	1.7	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Sgf11	PF08209.11	gi|284161909|ref|YP_003400532.1|	-	0.28	10.8	1.4	8.8	6.0	0.1	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Ribosomal_S3Ae	PF01015.18	gi|284161910|ref|YP_003400533.1|	-	2.2e-71	239.6	2.1	2.5e-71	239.4	2.1	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DoxA	PF07680.11	gi|284161910|ref|YP_003400533.1|	-	0.022	14.7	0.2	0.055	13.4	0.1	1.7	1	1	1	2	2	2	0	TQO	small	subunit	DoxA
HSM3_N	PF18795.1	gi|284161910|ref|YP_003400533.1|	-	0.028	13.9	0.1	0.039	13.4	0.1	1.2	1	0	0	1	1	1	0	DNA	mismatch	repair	protein	HSM3,	N	terminal	domain
Radical_SAM	PF04055.21	gi|284161911|ref|YP_003400534.1|	-	1.8e-11	44.7	3.2	7.8e-10	39.4	3.2	2.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284161911|ref|YP_003400534.1|	-	1.4e-05	25.2	1.3	0.00035	20.7	1.3	2.4	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
RIO1	PF01163.22	gi|284161912|ref|YP_003400535.1|	-	8.1e-11	41.9	0.0	1.4e-10	41.0	0.0	1.4	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.23	gi|284161912|ref|YP_003400535.1|	-	3.4e-08	33.7	0.1	8.4e-05	22.6	0.1	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.14	gi|284161912|ref|YP_003400535.1|	-	1.1e-07	31.4	0.0	6.1e-07	29.0	0.0	2.1	1	1	1	2	2	2	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.25	gi|284161912|ref|YP_003400535.1|	-	4e-06	26.4	0.0	5e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.20	gi|284161912|ref|YP_003400535.1|	-	0.0075	15.9	0.1	0.97	9.0	0.0	2.3	1	1	1	2	2	2	2	Choline/ethanolamine	kinase
Kinase-like	PF14531.6	gi|284161912|ref|YP_003400535.1|	-	0.056	12.8	0.0	0.13	11.5	0.0	1.6	1	1	1	2	2	2	0	Kinase-like
PRANC	PF09372.10	gi|284161912|ref|YP_003400535.1|	-	0.14	12.5	0.5	0.98	9.8	0.1	2.1	2	0	0	2	2	2	0	PRANC	domain
AbrB_C	PF18277.1	gi|284161912|ref|YP_003400535.1|	-	0.24	11.0	0.6	0.46	10.1	0.0	1.8	2	0	0	2	2	2	0	AbrB	C-terminal	domain
SBP_bac_11	PF13531.6	gi|284161913|ref|YP_003400536.1|	-	3.2e-42	144.9	0.0	3.9e-42	144.6	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|284161913|ref|YP_003400536.1|	-	2e-05	24.7	0.5	5.4e-05	23.3	0.3	1.6	1	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|284161913|ref|YP_003400536.1|	-	0.00031	20.2	0.2	0.011	15.1	0.1	2.2	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
PBP_like	PF12727.7	gi|284161913|ref|YP_003400536.1|	-	0.017	14.2	0.0	0.087	11.9	0.0	1.9	1	1	0	1	1	1	0	PBP	superfamily	domain
SBP_bac_8	PF13416.6	gi|284161913|ref|YP_003400536.1|	-	0.024	14.5	0.0	0.033	14.0	0.0	1.2	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
TF_Zn_Ribbon	PF08271.12	gi|284161914|ref|YP_003400537.1|	-	0.00038	19.9	1.7	0.00038	19.9	1.7	1.9	2	1	0	2	2	2	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|284161914|ref|YP_003400537.1|	-	0.00059	19.2	0.1	0.094	12.2	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.19	gi|284161914|ref|YP_003400537.1|	-	0.0012	18.6	0.3	0.71	9.7	0.0	2.1	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_4	PF13717.6	gi|284161914|ref|YP_003400537.1|	-	0.0034	17.3	0.7	0.013	15.4	0.7	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
CppA_C	PF14507.6	gi|284161914|ref|YP_003400537.1|	-	0.0039	17.9	0.7	0.0045	17.7	0.7	1.2	1	0	0	1	1	1	1	CppA	C-terminal
zf-RING_7	PF02591.15	gi|284161914|ref|YP_003400537.1|	-	0.0046	17.1	1.4	0.26	11.5	0.0	2.6	3	0	0	3	3	3	1	C4-type	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|284161914|ref|YP_003400537.1|	-	0.009	15.7	4.1	0.85	9.4	2.8	2.2	1	1	1	2	2	2	2	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-Di19	PF05605.12	gi|284161914|ref|YP_003400537.1|	-	0.011	16.0	0.5	0.022	15.1	0.2	1.7	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zinc_ribbon_5	PF13719.6	gi|284161914|ref|YP_003400537.1|	-	0.015	15.0	0.3	0.039	13.7	0.3	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Cys_rich_CPXG	PF14255.6	gi|284161914|ref|YP_003400537.1|	-	0.017	15.0	0.1	0.017	15.0	0.1	2.4	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
zinc_ribbon_2	PF13240.6	gi|284161914|ref|YP_003400537.1|	-	0.022	14.4	1.5	0.085	12.6	1.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.7	gi|284161914|ref|YP_003400537.1|	-	0.027	14.5	0.1	0.049	13.6	0.1	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.6	gi|284161914|ref|YP_003400537.1|	-	0.03	14.7	0.1	0.043	14.2	0.1	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-LSD1	PF06943.12	gi|284161914|ref|YP_003400537.1|	-	0.032	14.1	0.6	1.9	8.4	0.1	2.2	2	0	0	2	2	2	0	LSD1	zinc	finger
DUF3268	PF11672.8	gi|284161914|ref|YP_003400537.1|	-	0.039	14.3	0.4	1.8	9.0	0.1	2.1	1	1	1	2	2	2	0	zinc-finger-containing	domain
HypA	PF01155.19	gi|284161914|ref|YP_003400537.1|	-	0.063	13.3	0.1	0.097	12.7	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
HNH_4	PF13395.6	gi|284161914|ref|YP_003400537.1|	-	0.11	12.5	0.9	0.19	11.7	0.1	1.7	2	0	0	2	2	2	0	HNH	endonuclease
zf-BED	PF02892.15	gi|284161914|ref|YP_003400537.1|	-	0.14	12.2	0.5	5.1	7.2	0.1	2.1	1	1	1	2	2	2	0	BED	zinc	finger
zf-CHCC	PF10276.9	gi|284161914|ref|YP_003400537.1|	-	0.22	11.6	3.6	1.3	9.1	0.2	2.7	3	0	0	3	3	3	0	Zinc-finger	domain
FYDLN_acid	PF09538.10	gi|284161914|ref|YP_003400537.1|	-	0.31	11.7	4.8	2.4	8.9	4.8	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
PyrI_C	PF02748.15	gi|284161914|ref|YP_003400537.1|	-	0.61	10.0	5.7	0.69	9.9	0.1	2.6	3	0	0	3	3	3	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
RtcB	PF01139.17	gi|284161915|ref|YP_003400538.1|	-	6.5e-178	592.1	0.0	7.6e-178	591.9	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
LAGLIDADG_3	PF14528.6	gi|284161915|ref|YP_003400538.1|	-	5.5e-26	90.7	0.6	3.1e-22	78.7	0.1	2.7	2	0	0	2	2	2	2	LAGLIDADG-like	domain
Intein_splicing	PF14890.6	gi|284161915|ref|YP_003400538.1|	-	2.7e-13	50.0	0.1	5.1e-13	49.1	0.1	1.5	1	0	0	1	1	1	1	Intein	splicing	domain
LAGLIDADG_WhiA	PF14527.6	gi|284161915|ref|YP_003400538.1|	-	0.15	12.1	2.8	3.3	7.9	1.4	2.9	2	1	0	2	2	2	0	WhiA	LAGLIDADG-like	domain
TMP-TENI	PF02581.17	gi|284161916|ref|YP_003400539.1|	-	9.3e-62	207.6	0.1	1.2e-61	207.3	0.1	1.1	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
DUF561	PF04481.12	gi|284161916|ref|YP_003400539.1|	-	0.00022	20.5	0.2	0.028	13.6	0.3	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF561)
NMO	PF03060.15	gi|284161916|ref|YP_003400539.1|	-	0.0034	16.8	0.3	0.0068	15.8	0.3	1.5	1	1	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|284161916|ref|YP_003400539.1|	-	0.013	15.0	0.1	0.021	14.3	0.1	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|284161916|ref|YP_003400539.1|	-	0.016	14.5	0.0	0.025	13.9	0.0	1.3	1	0	0	1	1	1	0	Thiazole	biosynthesis	protein	ThiG
Herpes_pp85	PF04637.12	gi|284161916|ref|YP_003400539.1|	-	0.091	11.2	0.0	0.1	11.0	0.0	1.1	1	0	0	1	1	1	0	Herpesvirus	phosphoprotein	85	(HHV6-7	U14/HCMV	UL25)
NUDIX	PF00293.28	gi|284161917|ref|YP_003400540.1|	-	4.5e-19	68.8	0.0	5.5e-19	68.5	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
DUF4916	PF16262.5	gi|284161917|ref|YP_003400540.1|	-	4.7e-05	22.9	0.0	0.00074	19.1	0.0	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4916)
GyrI-like	PF06445.15	gi|284161917|ref|YP_003400540.1|	-	0.085	13.2	0.0	0.1	12.9	0.0	1.2	1	0	0	1	1	1	0	GyrI-like	small	molecule	binding	domain
TFIIS_C	PF01096.18	gi|284161918|ref|YP_003400541.1|	-	1e-19	70.1	16.1	1e-19	70.1	5.2	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|284161918|ref|YP_003400541.1|	-	1.3e-10	40.9	5.5	1.3e-10	40.9	5.5	3.1	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
TF_Zn_Ribbon	PF08271.12	gi|284161918|ref|YP_003400541.1|	-	2.1e-08	33.5	7.9	0.00036	20.0	0.2	2.9	2	1	0	2	2	2	2	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.7	gi|284161918|ref|YP_003400541.1|	-	2.2e-07	30.7	13.0	2e-05	24.5	2.0	2.7	2	1	1	3	3	3	3	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|284161918|ref|YP_003400541.1|	-	3.4e-06	26.3	9.7	0.0019	17.6	0.7	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
DZR	PF12773.7	gi|284161918|ref|YP_003400541.1|	-	5.5e-05	23.1	7.7	0.031	14.3	0.9	2.5	2	1	0	2	2	2	2	Double	zinc	ribbon
DUF35_N	PF12172.8	gi|284161918|ref|YP_003400541.1|	-	6.9e-05	22.6	8.7	0.22	11.5	0.1	3.8	4	0	0	4	4	4	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.11	gi|284161918|ref|YP_003400541.1|	-	0.00029	20.7	10.3	0.052	13.5	2.4	2.5	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.6	gi|284161918|ref|YP_003400541.1|	-	0.00079	19.1	18.2	0.22	11.3	1.2	4.1	4	0	0	4	4	4	2	zinc-ribbon	domain
zf-BED	PF02892.15	gi|284161918|ref|YP_003400541.1|	-	0.0013	18.7	6.9	0.4	10.7	0.0	3.3	3	0	0	3	3	3	1	BED	zinc	finger
Nudix_N_2	PF14803.6	gi|284161918|ref|YP_003400541.1|	-	0.0021	17.9	13.4	2.3	8.2	0.0	4.2	3	1	0	3	3	3	1	Nudix	N-terminal
A2L_zn_ribbon	PF08792.10	gi|284161918|ref|YP_003400541.1|	-	0.0028	17.3	14.1	0.0093	15.7	2.8	3.2	3	0	0	3	3	3	1	A2L	zinc	ribbon	domain
DUF3268	PF11672.8	gi|284161918|ref|YP_003400541.1|	-	0.0067	16.7	6.9	0.0077	16.5	1.1	2.2	2	1	0	2	2	2	1	zinc-finger-containing	domain
zf-C4_Topoisom	PF01396.19	gi|284161918|ref|YP_003400541.1|	-	0.0073	16.1	1.3	0.0073	16.1	1.3	3.4	3	1	0	3	3	3	1	Topoisomerase	DNA	binding	C4	zinc	finger
Ogr_Delta	PF04606.12	gi|284161918|ref|YP_003400541.1|	-	0.011	15.7	3.4	1.1	9.2	1.3	2.5	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
FdhE	PF04216.12	gi|284161918|ref|YP_003400541.1|	-	0.012	15.5	1.1	0.012	15.5	1.1	2.1	1	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
zf-ISL3	PF14690.6	gi|284161918|ref|YP_003400541.1|	-	0.021	15.5	10.2	1.9	9.2	0.3	3.8	3	1	1	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc-ribbons_6	PF07191.12	gi|284161918|ref|YP_003400541.1|	-	0.03	14.3	8.0	6.1	6.9	8.0	2.7	1	1	0	1	1	1	0	zinc-ribbons
zf-NADH-PPase	PF09297.11	gi|284161918|ref|YP_003400541.1|	-	0.034	13.8	0.5	0.034	13.8	0.5	3.2	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RRN7	PF11781.8	gi|284161918|ref|YP_003400541.1|	-	0.037	13.7	10.9	0.21	11.3	1.4	3.4	3	1	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
NOB1_Zn_bind	PF08772.11	gi|284161918|ref|YP_003400541.1|	-	0.041	14.0	9.4	2.3	8.4	3.3	3.3	3	1	0	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn_ribbon_SprT	PF17283.2	gi|284161918|ref|YP_003400541.1|	-	0.057	13.3	9.9	2.5	8.1	0.2	3.7	3	1	0	3	3	3	0	SprT-like	zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|284161918|ref|YP_003400541.1|	-	0.095	13.1	10.1	2.4	8.6	0.7	2.9	2	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
PriA_CRR	PF18319.1	gi|284161918|ref|YP_003400541.1|	-	0.1	12.6	2.4	19	5.3	0.0	3.3	3	1	0	3	3	3	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
HypA	PF01155.19	gi|284161918|ref|YP_003400541.1|	-	0.12	12.4	10.9	0.68	10.0	5.2	2.9	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
YhfH	PF14149.6	gi|284161918|ref|YP_003400541.1|	-	0.14	12.2	8.7	5.4	7.1	0.2	3.8	4	0	0	4	4	3	0	YhfH-like	protein
zinc_ribbon_4	PF13717.6	gi|284161918|ref|YP_003400541.1|	-	0.16	11.9	12.6	0.29	11.1	0.4	4.1	4	0	0	4	4	4	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.17	gi|284161918|ref|YP_003400541.1|	-	0.18	11.7	6.4	0.052	13.4	2.8	1.9	1	1	1	2	2	2	0	Domain	found	in	IF2B/IF5
Tnp_zf-ribbon_2	PF13842.6	gi|284161918|ref|YP_003400541.1|	-	0.32	11.8	7.5	15	6.5	1.6	3.2	3	0	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
CpXC	PF14353.6	gi|284161918|ref|YP_003400541.1|	-	0.41	10.7	9.7	0.45	10.6	1.3	3.2	2	1	2	4	4	4	0	CpXC	protein
Baculo_LEF5_C	PF11792.8	gi|284161918|ref|YP_003400541.1|	-	0.41	10.3	0.1	0.41	10.3	0.1	3.2	3	0	0	3	3	3	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
TackOD1	PF18551.1	gi|284161918|ref|YP_003400541.1|	-	0.57	9.8	8.4	0.3	10.7	1.3	2.7	2	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
Zn_ribbon_recom	PF13408.6	gi|284161918|ref|YP_003400541.1|	-	0.72	10.4	13.9	4.9	7.7	3.8	2.7	2	2	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Auto_anti-p27	PF06677.12	gi|284161918|ref|YP_003400541.1|	-	0.82	9.9	10.3	0.83	9.9	2.4	2.8	3	0	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn-ribbon_8	PF09723.10	gi|284161918|ref|YP_003400541.1|	-	0.84	9.8	18.9	3.7	7.8	0.7	4.2	3	1	0	3	3	3	0	Zinc	ribbon	domain
DUF2752	PF10825.8	gi|284161918|ref|YP_003400541.1|	-	0.97	9.5	3.4	2.8	8.1	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
CxC3	PF18804.1	gi|284161918|ref|YP_003400541.1|	-	1.1	9.1	5.8	0.66	9.8	0.6	2.5	1	1	1	3	3	3	0	CxC3	like	cysteine	cluster	associated	with	KDZ	transposases
zf-ACC	PF17848.1	gi|284161918|ref|YP_003400541.1|	-	1.2	9.3	15.7	17	5.6	4.2	4.2	3	1	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
FYDLN_acid	PF09538.10	gi|284161918|ref|YP_003400541.1|	-	1.3	9.8	7.1	10	6.9	0.1	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
zf-RING_7	PF02591.15	gi|284161918|ref|YP_003400541.1|	-	1.4	9.2	6.2	53	4.1	1.5	3.5	3	1	0	3	3	3	0	C4-type	zinc	ribbon	domain
ADK_lid	PF05191.14	gi|284161918|ref|YP_003400541.1|	-	1.9	8.5	10.2	13	5.9	0.1	3.9	4	0	0	4	4	4	0	Adenylate	kinase,	active	site	lid
zinc_ribbon_9	PF14369.6	gi|284161918|ref|YP_003400541.1|	-	1.9	8.8	7.7	3.5	8.0	0.1	3.3	4	0	0	4	4	3	0	zinc-ribbon
zf_UBZ	PF18439.1	gi|284161918|ref|YP_003400541.1|	-	2.2	8.0	12.8	7.6	6.2	0.1	4.1	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
Terminase_GpA	PF05876.12	gi|284161918|ref|YP_003400541.1|	-	3.3	6.1	8.7	0.52	8.8	2.5	2.0	1	1	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
zf-H2C2_2	PF13465.6	gi|284161918|ref|YP_003400541.1|	-	4.4	7.9	18.2	5.6	7.6	0.8	4.1	4	0	0	4	4	4	0	Zinc-finger	double	domain
PhnA_Zn_Ribbon	PF08274.12	gi|284161918|ref|YP_003400541.1|	-	4.5	7.3	10.8	4	7.5	1.3	3.4	2	2	0	2	2	2	0	PhnA	Zinc-Ribbon
Zn_Tnp_IS1	PF03811.13	gi|284161918|ref|YP_003400541.1|	-	4.6	7.0	12.5	3.3	7.5	0.8	3.5	2	2	0	2	2	2	0	InsA	N-terminal	domain
zf-LITAF-like	PF10601.9	gi|284161918|ref|YP_003400541.1|	-	4.7	7.6	8.8	12	6.3	0.1	3.7	3	1	1	4	4	4	0	LITAF-like	zinc	ribbon	domain
Rpr2	PF04032.16	gi|284161918|ref|YP_003400541.1|	-	4.7	7.6	8.2	23	5.4	8.2	2.3	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-IS66	PF13005.7	gi|284161918|ref|YP_003400541.1|	-	5	7.6	13.0	67	4.0	0.0	4.2	3	1	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
Rubredoxin_2	PF18073.1	gi|284161918|ref|YP_003400541.1|	-	5.5	6.8	18.8	5.7	6.8	0.6	4.1	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
DNA_RNApol_7kD	PF03604.13	gi|284161918|ref|YP_003400541.1|	-	7.2	6.4	11.8	19	5.0	1.6	3.4	3	1	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2_4	PF13894.6	gi|284161918|ref|YP_003400541.1|	-	7.6	7.7	14.0	7.7	7.7	0.4	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
GFA	PF04828.14	gi|284161918|ref|YP_003400541.1|	-	9.4	6.7	11.2	13	6.2	0.8	3.4	1	1	2	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
UbiA	PF01040.18	gi|284161919|ref|YP_003400542.1|	-	1.2e-17	64.0	17.6	1.7e-17	63.5	17.6	1.3	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
FIST	PF08495.10	gi|284161920|ref|YP_003400543.1|	-	2.1e-05	24.6	0.0	4.2e-05	23.6	0.0	1.5	1	1	0	1	1	1	1	FIST	N	domain
ATPase	PF06745.13	gi|284161922|ref|YP_003400545.1|	-	1.8e-38	132.2	0.1	4.2e-38	131.0	0.0	1.7	2	1	0	2	2	2	1	KaiC
AAA_25	PF13481.6	gi|284161922|ref|YP_003400545.1|	-	0.00011	21.9	0.0	0.00029	20.5	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|284161922|ref|YP_003400545.1|	-	0.0013	18.1	0.0	0.0022	17.4	0.0	1.3	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
Chordopox_E11	PF06138.12	gi|284161922|ref|YP_003400545.1|	-	0.019	15.3	0.2	0.5	10.7	0.0	2.3	2	0	0	2	2	2	0	Chordopoxvirus	E11	protein
Rad51	PF08423.11	gi|284161922|ref|YP_003400545.1|	-	0.028	13.7	0.1	0.052	12.8	0.1	1.5	1	0	0	1	1	1	0	Rad51
AAA_14	PF13173.6	gi|284161922|ref|YP_003400545.1|	-	0.028	14.4	0.0	0.063	13.3	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
MEDS	PF14417.6	gi|284161922|ref|YP_003400545.1|	-	0.037	13.9	0.0	0.071	12.9	0.0	1.4	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
RecA	PF00154.21	gi|284161922|ref|YP_003400545.1|	-	0.089	12.2	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
Cyc-maltodext_C	PF10438.9	gi|284161922|ref|YP_003400545.1|	-	0.16	12.1	0.1	0.3	11.2	0.1	1.4	1	0	0	1	1	1	0	Cyclo-malto-dextrinase	C-terminal	domain
ArsA_HSP20	PF17886.1	gi|284161923|ref|YP_003400546.1|	-	1.8e-11	43.4	0.0	2.6e-11	42.9	0.0	1.2	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
HSP20	PF00011.21	gi|284161923|ref|YP_003400546.1|	-	1.2e-10	41.5	2.3	2.1e-09	37.5	2.3	2.1	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.16	gi|284161923|ref|YP_003400546.1|	-	0.0035	18.3	0.1	0.0057	17.7	0.1	1.3	1	0	0	1	1	1	1	CS	domain
PIH1_CS	PF18201.1	gi|284161923|ref|YP_003400546.1|	-	0.012	16.0	0.1	0.018	15.4	0.1	1.2	1	0	0	1	1	1	0	PIH1	CS-like	domain
AAA	PF00004.29	gi|284161924|ref|YP_003400547.1|	-	1.8e-99	329.4	1.8	7.3e-50	168.8	0.0	4.7	4	0	0	4	4	4	3	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.18	gi|284161924|ref|YP_003400547.1|	-	5.1e-34	116.3	0.4	2.7e-33	114.0	0.4	2.4	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_lid_3	PF17862.1	gi|284161924|ref|YP_003400547.1|	-	4.9e-27	93.5	8.1	1.9e-14	53.2	1.1	3.1	2	1	1	3	3	2	2	AAA+	lid	domain
LAGLIDADG_3	PF14528.6	gi|284161924|ref|YP_003400547.1|	-	2.2e-25	88.8	2.3	5.7e-17	61.8	0.5	3.0	2	0	0	2	2	2	2	LAGLIDADG-like	domain
Intein_splicing	PF14890.6	gi|284161924|ref|YP_003400547.1|	-	2.6e-21	76.0	0.3	9.3e-21	74.2	0.3	2.0	1	0	0	1	1	1	1	Intein	splicing	domain
CDC48_2	PF02933.17	gi|284161924|ref|YP_003400547.1|	-	6.4e-17	61.1	0.2	2.7e-16	59.1	0.2	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
RuvB_N	PF05496.12	gi|284161924|ref|YP_003400547.1|	-	1.7e-15	57.2	0.7	1.4e-07	31.4	0.0	3.3	4	0	0	4	4	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|284161924|ref|YP_003400547.1|	-	1.8e-14	54.5	0.2	1.1e-05	25.9	0.0	4.3	4	0	0	4	4	4	2	AAA	ATPase	domain
AAA_2	PF07724.14	gi|284161924|ref|YP_003400547.1|	-	3.7e-13	50.0	0.7	6.7e-07	29.6	0.0	4.6	4	0	0	4	4	4	1	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.14	gi|284161924|ref|YP_003400547.1|	-	3.2e-10	40.1	0.7	0.0028	17.7	0.0	4.3	3	1	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|284161924|ref|YP_003400547.1|	-	4.1e-10	40.1	0.2	0.0029	17.9	0.0	4.0	3	1	0	3	3	3	2	AAA	domain
TIP49	PF06068.13	gi|284161924|ref|YP_003400547.1|	-	1.2e-09	37.9	0.2	0.00077	18.8	0.0	3.0	2	1	1	3	3	3	2	TIP49	P-loop	domain
Vps4_C	PF09336.10	gi|284161924|ref|YP_003400547.1|	-	1.5e-09	37.7	3.2	2.3e-05	24.3	0.2	3.5	3	0	0	3	3	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_33	PF13671.6	gi|284161924|ref|YP_003400547.1|	-	1.1e-07	32.1	0.0	0.0099	16.0	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|284161924|ref|YP_003400547.1|	-	1.7e-07	31.8	0.1	0.062	13.8	0.0	3.7	3	0	0	3	3	3	2	AAA	domain
IstB_IS21	PF01695.17	gi|284161924|ref|YP_003400547.1|	-	1.9e-07	31.0	0.0	0.0071	16.1	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_28	PF13521.6	gi|284161924|ref|YP_003400547.1|	-	5.5e-07	30.0	0.0	0.02	15.2	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.6	gi|284161924|ref|YP_003400547.1|	-	6e-07	29.6	0.0	0.00061	19.8	0.0	3.8	3	1	1	4	4	4	1	AAA	domain
RNA_helicase	PF00910.22	gi|284161924|ref|YP_003400547.1|	-	9.4e-07	29.2	0.0	0.06	13.7	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
Mg_chelatase	PF01078.21	gi|284161924|ref|YP_003400547.1|	-	1.5e-06	27.8	0.7	0.064	12.6	0.0	2.9	3	0	0	3	3	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_7	PF12775.7	gi|284161924|ref|YP_003400547.1|	-	1.8e-06	27.6	0.0	0.047	13.2	0.0	2.9	3	0	0	3	3	3	2	P-loop	containing	dynein	motor	region
AAA_24	PF13479.6	gi|284161924|ref|YP_003400547.1|	-	5.9e-06	26.1	0.0	0.12	12.1	0.1	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_3	PF07726.11	gi|284161924|ref|YP_003400547.1|	-	1.2e-05	25.2	0.0	0.45	10.4	0.0	3.3	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|284161924|ref|YP_003400547.1|	-	1.3e-05	25.0	0.1	0.6	9.8	0.0	3.9	4	1	0	4	4	3	2	Sigma-54	interaction	domain
TsaE	PF02367.17	gi|284161924|ref|YP_003400547.1|	-	1.9e-05	24.7	0.0	0.37	10.8	0.0	2.8	3	0	0	3	3	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATPase	PF06745.13	gi|284161924|ref|YP_003400547.1|	-	2.1e-05	24.0	0.9	0.49	9.7	0.0	4.5	4	0	0	4	4	4	2	KaiC
Parvo_NS1	PF01057.17	gi|284161924|ref|YP_003400547.1|	-	4e-05	22.8	0.0	0.15	11.1	0.0	2.5	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
DUF815	PF05673.13	gi|284161924|ref|YP_003400547.1|	-	8.5e-05	21.8	0.0	0.26	10.4	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Zeta_toxin	PF06414.12	gi|284161924|ref|YP_003400547.1|	-	9.2e-05	21.8	0.1	0.24	10.7	0.0	2.8	2	0	0	2	2	2	2	Zeta	toxin
LAGLIDADG_WhiA	PF14527.6	gi|284161924|ref|YP_003400547.1|	-	0.00018	21.5	4.2	0.27	11.3	0.1	3.6	4	0	0	4	4	2	2	WhiA	LAGLIDADG-like	domain
DUF2075	PF09848.9	gi|284161924|ref|YP_003400547.1|	-	0.0002	20.7	0.0	0.51	9.5	0.0	2.5	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
PhoH	PF02562.16	gi|284161924|ref|YP_003400547.1|	-	0.0003	20.3	0.3	0.69	9.3	0.1	2.5	2	0	0	2	2	2	2	PhoH-like	protein
ABC_tran	PF00005.27	gi|284161924|ref|YP_003400547.1|	-	0.00036	21.1	0.0	2.6	8.6	0.0	3.5	3	0	0	3	3	2	1	ABC	transporter
NB-ARC	PF00931.22	gi|284161924|ref|YP_003400547.1|	-	0.00052	19.3	0.0	1.4	8.1	0.0	3.1	3	0	0	3	3	3	2	NB-ARC	domain
NTPase_1	PF03266.15	gi|284161924|ref|YP_003400547.1|	-	0.00065	19.7	1.6	3.5	7.5	0.0	4.3	3	2	0	3	3	3	0	NTPase
Bac_DnaA	PF00308.18	gi|284161924|ref|YP_003400547.1|	-	0.00066	19.6	3.6	2.1	8.1	0.0	4.4	4	1	0	4	4	4	1	Bacterial	dnaA	protein
AAA_30	PF13604.6	gi|284161924|ref|YP_003400547.1|	-	0.00073	19.3	0.0	1.6	8.4	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.6	gi|284161924|ref|YP_003400547.1|	-	0.0018	17.9	5.2	2.3	7.7	0.1	4.0	3	1	0	4	4	3	1	AAA	domain
AAA_19	PF13245.6	gi|284161924|ref|YP_003400547.1|	-	0.002	18.5	1.3	1.8	8.9	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|284161924|ref|YP_003400547.1|	-	0.0036	17.2	1.0	1.7	8.5	0.0	3.3	4	0	0	4	4	2	1	NACHT	domain
AAA_11	PF13086.6	gi|284161924|ref|YP_003400547.1|	-	0.005	16.7	5.6	1.9	8.2	0.0	3.5	4	0	0	4	4	3	2	AAA	domain
Sigma54_activ_2	PF14532.6	gi|284161924|ref|YP_003400547.1|	-	0.0067	16.6	0.0	3.8	7.6	0.0	3.3	3	0	0	3	3	3	0	Sigma-54	interaction	domain
Cytidylate_kin	PF02224.18	gi|284161924|ref|YP_003400547.1|	-	0.0073	16.1	0.1	5.7	6.6	0.0	2.7	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_17	PF13207.6	gi|284161924|ref|YP_003400547.1|	-	0.015	15.7	11.1	3.2	8.2	0.0	5.1	4	2	2	6	6	3	0	AAA	domain
Cytidylate_kin2	PF13189.6	gi|284161924|ref|YP_003400547.1|	-	0.023	14.8	1.9	1.7	8.8	0.0	3.7	4	0	0	4	4	2	0	Cytidylate	kinase-like	family
SKI	PF01202.22	gi|284161924|ref|YP_003400547.1|	-	0.025	14.7	0.9	8.9	6.4	0.0	3.3	3	0	0	3	3	3	0	Shikimate	kinase
T2SSE	PF00437.20	gi|284161924|ref|YP_003400547.1|	-	0.032	13.3	0.0	4.4	6.3	0.0	2.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
TniB	PF05621.11	gi|284161924|ref|YP_003400547.1|	-	0.051	13.0	0.0	15	4.9	0.0	3.0	3	0	0	3	3	2	0	Bacterial	TniB	protein
Hom_end	PF05204.14	gi|284161924|ref|YP_003400547.1|	-	0.12	12.6	0.0	0.27	11.4	0.0	1.5	1	0	0	1	1	1	0	Homing	endonuclease
4HB_MCP_1	PF12729.7	gi|284161924|ref|YP_003400547.1|	-	0.32	10.5	5.3	0.33	10.5	0.2	2.4	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
ATPase_2	PF01637.18	gi|284161924|ref|YP_003400547.1|	-	0.54	10.1	13.6	4.1	7.3	0.0	4.9	5	2	0	6	6	4	0	ATPase	domain	predominantly	from	Archaea
RNA_pol_Rpb5_C	PF01191.19	gi|284161924|ref|YP_003400547.1|	-	1.1	9.1	9.1	8	6.4	0.1	4.7	5	0	0	5	5	4	0	RNA	polymerase	Rpb5,	C-terminal	domain
SapB_1	PF05184.15	gi|284161924|ref|YP_003400547.1|	-	8.7	6.5	5.4	6.6	6.9	0.6	2.8	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
HTH_5	PF01022.20	gi|284161925|ref|YP_003400548.1|	-	1.3e-16	60.2	1.3	9.3e-14	51.0	0.3	2.7	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|284161925|ref|YP_003400548.1|	-	1.1e-14	54.2	0.1	2.2e-10	40.4	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
TrmB	PF01978.19	gi|284161925|ref|YP_003400548.1|	-	2.5e-10	40.1	3.4	0.0004	20.2	0.0	3.2	4	1	1	5	5	3	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284161925|ref|YP_003400548.1|	-	2.1e-08	33.9	0.1	0.0036	17.2	0.1	2.4	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.22	gi|284161925|ref|YP_003400548.1|	-	4.3e-08	33.0	0.6	0.022	14.7	0.0	3.2	3	1	1	4	4	3	2	MarR	family
HTH_Crp_2	PF13545.6	gi|284161925|ref|YP_003400548.1|	-	7.7e-08	32.2	0.0	0.0013	18.7	0.0	2.6	2	0	0	2	2	2	2	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284161925|ref|YP_003400548.1|	-	3.4e-06	26.5	1.0	0.036	13.6	0.1	3.6	2	1	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
LexA_DNA_bind	PF01726.16	gi|284161925|ref|YP_003400548.1|	-	4e-06	26.5	1.0	0.05	13.4	0.0	2.9	3	0	0	3	3	3	2	LexA	DNA	binding	domain
Rrf2	PF02082.20	gi|284161925|ref|YP_003400548.1|	-	5.6e-06	26.6	0.1	0.0031	17.8	0.0	2.8	3	0	0	3	3	3	1	Transcriptional	regulator
Fe_dep_repress	PF01325.19	gi|284161925|ref|YP_003400548.1|	-	1.5e-05	25.1	0.3	0.2	11.9	0.0	3.4	3	0	0	3	3	3	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.9	gi|284161925|ref|YP_003400548.1|	-	2.8e-05	24.1	0.6	0.023	14.8	0.0	2.7	3	0	0	3	3	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
BLACT_WH	PF17778.1	gi|284161925|ref|YP_003400548.1|	-	9.9e-05	22.2	0.6	0.014	15.3	0.0	2.4	2	0	0	2	2	2	1	Beta-lactamase	associated	winged	helix	domain
HTH_CodY	PF08222.11	gi|284161925|ref|YP_003400548.1|	-	0.00021	20.7	0.0	0.23	11.0	0.0	2.4	2	0	0	2	2	2	2	CodY	helix-turn-helix	domain
GntR	PF00392.21	gi|284161925|ref|YP_003400548.1|	-	0.00039	20.0	0.1	0.0045	16.6	0.3	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
DUF4423	PF14394.6	gi|284161925|ref|YP_003400548.1|	-	0.00077	19.2	0.4	1.1	9.0	0.0	2.8	1	1	0	2	2	2	2	Domain	of	unknown	function	(DUF4423)
Penicillinase_R	PF03965.16	gi|284161925|ref|YP_003400548.1|	-	0.00083	19.7	0.5	1.8	8.9	0.0	3.3	3	1	0	3	3	3	1	Penicillinase	repressor
FaeA	PF04703.12	gi|284161925|ref|YP_003400548.1|	-	0.00096	19.5	0.1	1	9.8	0.0	2.4	2	0	0	2	2	2	1	FaeA-like	protein
HTH_27	PF13463.6	gi|284161925|ref|YP_003400548.1|	-	0.001	19.5	1.1	0.2	12.2	0.1	3.1	3	1	1	4	4	3	1	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|284161925|ref|YP_003400548.1|	-	0.0011	18.8	1.4	1.1	9.2	0.1	3.3	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DDRGK	PF09756.9	gi|284161925|ref|YP_003400548.1|	-	0.0025	17.4	0.6	0.17	11.4	0.0	2.7	1	1	2	3	3	3	1	DDRGK	domain
DprA_WH	PF17782.1	gi|284161925|ref|YP_003400548.1|	-	0.0028	17.7	0.2	0.23	11.6	0.0	2.4	2	0	0	2	2	2	1	DprA	winged	helix	domain
HTH_47	PF16221.5	gi|284161925|ref|YP_003400548.1|	-	0.0044	16.5	0.0	0.18	11.4	0.0	2.6	2	0	0	2	2	2	1	winged	helix-turn-helix
HxlR	PF01638.17	gi|284161925|ref|YP_003400548.1|	-	0.005	16.7	0.1	4.9	7.1	0.0	2.6	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
PaaX	PF07848.12	gi|284161925|ref|YP_003400548.1|	-	0.0097	16.1	0.3	1.4	9.2	0.1	2.9	3	0	0	3	3	3	1	PaaX-like	protein
DUF892	PF05974.12	gi|284161925|ref|YP_003400548.1|	-	0.01	15.9	0.1	0.018	15.1	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF892)
DDE_Tnp_2	PF04693.12	gi|284161925|ref|YP_003400548.1|	-	0.011	15.0	0.2	0.17	11.1	0.1	2.1	2	0	0	2	2	2	0	Archaeal	putative	transposase	ISC1217
HTH_IclR	PF09339.10	gi|284161925|ref|YP_003400548.1|	-	0.013	15.3	0.1	0.35	10.7	0.1	2.4	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
SMC_ScpB	PF04079.16	gi|284161925|ref|YP_003400548.1|	-	0.018	14.6	1.8	0.29	10.7	0.4	2.3	1	1	1	2	2	2	0	Segregation	and	condensation	complex	subunit	ScpB
HTH_12	PF08461.10	gi|284161925|ref|YP_003400548.1|	-	0.026	14.4	1.0	0.87	9.6	0.0	3.1	3	1	0	3	3	3	0	Ribonuclease	R	winged-helix	domain
HemN_C	PF06969.16	gi|284161925|ref|YP_003400548.1|	-	0.037	14.1	0.1	0.12	12.5	0.0	2.0	2	0	0	2	2	1	0	HemN	C-terminal	domain
Casc1_N	PF15927.5	gi|284161925|ref|YP_003400548.1|	-	0.038	13.7	0.2	0.065	12.9	0.2	1.3	1	0	0	1	1	1	0	Cancer	susceptibility	candidate	1	N-terminus
Cdc6_C	PF09079.11	gi|284161925|ref|YP_003400548.1|	-	0.053	13.5	0.1	14	5.7	0.0	2.7	2	0	0	2	2	2	0	CDC6,	C	terminal	winged	helix	domain
IF2_N	PF04760.15	gi|284161925|ref|YP_003400548.1|	-	0.071	12.9	0.0	0.28	11.0	0.0	2.0	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_36	PF13730.6	gi|284161925|ref|YP_003400548.1|	-	0.1	12.6	0.0	5.5	7.0	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
TFA2_Winged_2	PF18121.1	gi|284161925|ref|YP_003400548.1|	-	0.14	11.9	1.2	15	5.4	0.1	3.2	3	1	0	3	3	3	0	TFA2	Winged	helix	domain	2
Fibrillarin	PF01269.17	gi|284161926|ref|YP_003400549.1|	-	2.6e-74	249.2	1.2	2.8e-74	249.0	1.2	1.0	1	0	0	1	1	1	1	Fibrillarin
Hydrolase_3	PF08282.12	gi|284161927|ref|YP_003400550.1|	-	1.5e-38	133.0	3.8	3.6e-26	92.5	0.7	2.0	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|284161927|ref|YP_003400550.1|	-	8.5e-13	48.4	0.1	1.5e-10	41.0	0.0	2.3	2	1	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|284161927|ref|YP_003400550.1|	-	2.1e-10	41.3	6.9	0.0014	18.9	0.2	3.5	2	1	2	4	4	4	3	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|284161927|ref|YP_003400550.1|	-	8e-08	32.9	3.9	0.0053	17.2	0.0	3.2	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|284161927|ref|YP_003400550.1|	-	0.0016	18.6	0.0	0.47	10.5	0.1	2.7	3	0	0	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|284161927|ref|YP_003400550.1|	-	0.0017	18.4	0.0	0.0054	16.8	0.0	1.9	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|284161927|ref|YP_003400550.1|	-	0.048	13.7	0.2	0.14	12.2	0.1	1.9	2	0	0	2	2	2	0	HAD-hyrolase-like
tRNA-synt_2d	PF01409.20	gi|284161928|ref|YP_003400551.1|	-	4e-94	314.7	0.0	5.2e-94	314.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|284161928|ref|YP_003400551.1|	-	1.2e-08	34.6	0.0	1.6e-06	27.7	0.0	2.3	2	0	0	2	2	2	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
PheRS_DBD2	PF18554.1	gi|284161928|ref|YP_003400551.1|	-	5.5e-08	32.7	1.1	5.5e-08	32.7	1.1	2.2	2	0	0	2	2	2	1	PheRS	DNA	binding	domain	2
DUF2582	PF10771.9	gi|284161928|ref|YP_003400551.1|	-	3e-05	24.1	0.1	0.00011	22.2	0.1	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	domain	(DUF2582)
tRNA-synt_2	PF00152.20	gi|284161928|ref|YP_003400551.1|	-	0.016	14.3	0.4	0.13	11.3	0.0	2.4	3	0	0	3	3	3	0	tRNA	synthetases	class	II	(D,	K	and	N)
PheRS_DBD3	PF18553.1	gi|284161928|ref|YP_003400551.1|	-	0.055	13.8	0.2	0.35	11.2	0.0	2.4	2	0	0	2	2	2	0	PheRS	DNA	binding	domain	3
DUF3116	PF11313.8	gi|284161928|ref|YP_003400551.1|	-	0.077	12.9	0.0	0.18	11.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
FeoC	PF09012.10	gi|284161928|ref|YP_003400551.1|	-	0.2	11.8	0.0	0.42	10.7	0.0	1.5	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
IZUMO	PF15005.6	gi|284161928|ref|YP_003400551.1|	-	0.21	12.1	0.3	0.45	11.0	0.3	1.6	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
Nitro_FeMo-Co	PF02579.17	gi|284161929|ref|YP_003400552.1|	-	5.4e-21	74.7	0.0	6.6e-21	74.5	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DeoC	PF01791.9	gi|284161930|ref|YP_003400553.1|	-	2.3e-65	220.5	0.1	2.7e-65	220.3	0.1	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
TMP-TENI	PF02581.17	gi|284161930|ref|YP_003400553.1|	-	0.00079	18.8	0.1	0.051	12.9	0.1	2.4	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
ThiG	PF05690.14	gi|284161930|ref|YP_003400553.1|	-	0.013	14.8	3.0	0.019	14.2	1.8	1.7	1	1	1	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|284161930|ref|YP_003400553.1|	-	0.021	13.9	0.6	3	6.9	0.1	2.5	3	0	0	3	3	3	0	Dihydrouridine	synthase	(Dus)
PEP_mutase	PF13714.6	gi|284161930|ref|YP_003400553.1|	-	0.024	14.1	2.0	2.2	7.7	0.2	2.5	2	1	1	3	3	3	0	Phosphoenolpyruvate	phosphomutase
MCR_C	PF04609.12	gi|284161930|ref|YP_003400553.1|	-	0.041	13.0	0.0	0.06	12.4	0.0	1.3	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	operon	protein	C
DUF561	PF04481.12	gi|284161930|ref|YP_003400553.1|	-	0.062	12.5	0.7	0.086	12.0	0.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
DUF4180	PF13788.6	gi|284161930|ref|YP_003400553.1|	-	0.13	12.2	0.0	1.2	9.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4180)
Pilin_N	PF07790.11	gi|284161931|ref|YP_003400554.1|	-	6.6e-23	81.4	1.0	1.2e-22	80.6	1.0	1.4	1	0	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
GATase_5	PF13507.6	gi|284161933|ref|YP_003400556.1|	-	4.2e-65	219.4	0.0	4.7e-65	219.3	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|284161933|ref|YP_003400556.1|	-	1.6e-07	31.3	0.0	2e-06	27.7	0.0	2.2	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.24	gi|284161933|ref|YP_003400556.1|	-	2.9e-05	23.9	0.0	5.6e-05	23.0	0.0	1.5	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.14	gi|284161933|ref|YP_003400556.1|	-	0.00015	21.5	0.0	0.00024	20.8	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_C26	PF07722.13	gi|284161933|ref|YP_003400556.1|	-	0.012	15.4	0.0	0.022	14.5	0.0	1.3	1	0	0	1	1	1	0	Peptidase	C26
DUF4405	PF14358.6	gi|284161934|ref|YP_003400557.1|	-	4e-13	49.7	6.6	4.6e-13	49.5	6.6	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4405)
DUF4079	PF13301.6	gi|284161934|ref|YP_003400557.1|	-	0.00099	19.3	1.3	0.0013	18.9	1.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4079)
Ni_hydr_CYTB	PF01292.20	gi|284161934|ref|YP_003400557.1|	-	0.0068	16.0	4.1	0.0089	15.6	4.1	1.2	1	0	0	1	1	1	1	Prokaryotic	cytochrome	b561
ECF_trnsprt	PF12822.7	gi|284161934|ref|YP_003400557.1|	-	0.023	14.8	1.9	0.023	14.8	1.9	1.1	1	0	0	1	1	1	0	ECF	transporter,	substrate-specific	component
SPC25	PF06703.11	gi|284161934|ref|YP_003400557.1|	-	0.096	12.5	0.6	0.096	12.5	0.6	1.6	1	1	1	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
DUF202	PF02656.15	gi|284161934|ref|YP_003400557.1|	-	0.14	12.6	1.2	0.22	12.0	1.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
TMEM132D_C	PF15706.5	gi|284161934|ref|YP_003400557.1|	-	0.15	11.9	0.0	0.25	11.1	0.0	1.4	1	0	0	1	1	1	0	Mature	oligodendrocyte	transmembrane	protein,	TMEM132D,	C-term
PepSY_TM	PF03929.16	gi|284161934|ref|YP_003400557.1|	-	0.2	11.3	2.3	0.25	11.0	2.3	1.2	1	0	0	1	1	1	0	PepSY-associated	TM	region
tRNA_anti-codon	PF01336.25	gi|284161935|ref|YP_003400558.1|	-	4.8e-09	36.1	1.3	1.6e-08	34.4	1.3	2.0	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
S1	PF00575.23	gi|284161935|ref|YP_003400558.1|	-	6e-07	29.7	1.2	2.8e-06	27.5	1.2	2.3	1	1	0	1	1	1	1	S1	RNA	binding	domain
DnaJ_CXXCXGXG	PF00684.19	gi|284161935|ref|YP_003400558.1|	-	2.9e-06	27.5	12.3	2.9e-06	27.5	12.3	2.4	1	1	1	2	2	2	2	DnaJ	central	domain
DHH	PF01368.20	gi|284161935|ref|YP_003400558.1|	-	0.001	19.3	0.0	0.0045	17.2	0.1	2.0	2	1	0	2	2	2	1	DHH	family
Rep_fac-A_3	PF08661.11	gi|284161935|ref|YP_003400558.1|	-	0.047	14.0	0.6	0.18	12.2	0.2	2.2	2	0	0	2	2	2	0	Replication	factor	A	protein	3
DUF5351	PF17302.2	gi|284161935|ref|YP_003400558.1|	-	0.16	12.2	20.6	0.11	12.7	6.7	3.5	2	2	0	2	2	2	0	Family	of	unknown	function	(DUF5351)
DZR	PF12773.7	gi|284161935|ref|YP_003400558.1|	-	0.71	9.9	17.1	1.2e+02	2.8	17.0	2.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Anti-TRAP	PF15777.5	gi|284161935|ref|YP_003400558.1|	-	2.4	8.2	25.1	0.21	11.6	0.2	3.8	3	1	1	4	4	4	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
PHF5	PF03660.14	gi|284161935|ref|YP_003400558.1|	-	6.1	7.1	13.9	1.1	9.5	6.7	2.3	1	1	1	2	2	2	0	PHF5-like	protein
Stc1	PF12898.7	gi|284161935|ref|YP_003400558.1|	-	6.3	7.4	9.2	16	6.1	2.1	2.4	1	1	1	2	2	2	0	Stc1	domain
GATase	PF00117.28	gi|284161937|ref|YP_003400560.1|	-	3.4e-21	75.9	0.0	3.9e-21	75.7	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|284161937|ref|YP_003400560.1|	-	3.7e-08	33.4	0.1	1.6e-07	31.4	0.1	1.8	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|284161937|ref|YP_003400560.1|	-	2e-06	27.8	0.0	4.8e-06	26.5	0.0	1.6	1	1	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.14	gi|284161937|ref|YP_003400560.1|	-	0.035	13.7	0.0	0.047	13.3	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
GSP_synth	PF03738.14	gi|284161938|ref|YP_003400561.1|	-	0.06	12.5	0.0	0.071	12.3	0.0	1.2	1	0	0	1	1	1	0	Glutathionylspermidine	synthase	preATP-grasp
Kinesin_assoc	PF16183.5	gi|284161938|ref|YP_003400561.1|	-	0.13	12.4	0.0	0.2	11.8	0.0	1.2	1	0	0	1	1	1	0	Kinesin-associated
Lipase_GDSL	PF00657.22	gi|284161939|ref|YP_003400562.1|	-	0.017	15.1	0.1	0.35	10.8	0.1	2.0	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase
DUF3223	PF11523.8	gi|284161939|ref|YP_003400562.1|	-	0.078	13.8	0.4	2.3	9.1	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3223)
Ndufs5	PF10200.9	gi|284161939|ref|YP_003400562.1|	-	0.099	12.9	0.0	0.26	11.6	0.0	1.7	1	0	0	1	1	1	0	NADH:ubiquinone	oxidoreductase,	NDUFS5-15kDa
Hydrolase	PF00702.26	gi|284161939|ref|YP_003400562.1|	-	0.1	12.8	0.1	2.2	8.5	0.0	2.3	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Thioredoxin	PF00085.20	gi|284161940|ref|YP_003400563.1|	-	2.9e-15	56.1	0.0	3.3e-15	55.9	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_3	PF13192.6	gi|284161940|ref|YP_003400563.1|	-	1.6e-05	24.8	0.0	2.5e-05	24.2	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|284161940|ref|YP_003400563.1|	-	1.8e-05	25.1	0.2	0.00077	19.9	0.2	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF836	PF05768.14	gi|284161940|ref|YP_003400563.1|	-	0.0022	18.4	0.0	0.0026	18.1	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
HyaE	PF07449.11	gi|284161940|ref|YP_003400563.1|	-	0.0027	17.6	0.0	0.003	17.5	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_4	PF13462.6	gi|284161940|ref|YP_003400563.1|	-	0.0062	16.7	0.0	0.008	16.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.6	gi|284161940|ref|YP_003400563.1|	-	0.049	14.0	0.2	0.12	12.7	0.1	1.7	1	1	1	2	2	2	0	Thioredoxin-like
HxlR	PF01638.17	gi|284161941|ref|YP_003400564.1|	-	1.4e-06	28.1	0.3	1.8e-06	27.7	0.3	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.14	gi|284161941|ref|YP_003400564.1|	-	4.4e-05	23.4	0.2	7.4e-05	22.6	0.2	1.5	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.6	gi|284161941|ref|YP_003400564.1|	-	6.9e-05	22.8	0.4	8.5e-05	22.5	0.4	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_5	PF01022.20	gi|284161941|ref|YP_003400564.1|	-	0.00018	21.3	0.0	0.00055	19.7	0.0	1.9	2	1	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
Replic_Relax	PF13814.6	gi|284161941|ref|YP_003400564.1|	-	0.00021	21.4	0.0	0.00026	21.1	0.0	1.2	1	0	0	1	1	1	1	Replication-relaxation
MarR_2	PF12802.7	gi|284161941|ref|YP_003400564.1|	-	0.00025	20.9	0.0	0.00048	19.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|284161941|ref|YP_003400564.1|	-	0.0011	18.8	0.1	0.0016	18.3	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|284161941|ref|YP_003400564.1|	-	0.0012	19.3	0.3	0.0054	17.2	0.2	1.9	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
DUF505	PF04458.12	gi|284161941|ref|YP_003400564.1|	-	0.006	15.0	1.2	0.0073	14.7	1.2	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
TFIIE_alpha	PF02002.17	gi|284161941|ref|YP_003400564.1|	-	0.009	15.9	1.8	0.011	15.5	1.8	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
FUR	PF01475.19	gi|284161941|ref|YP_003400564.1|	-	0.026	14.7	1.2	0.13	12.4	0.8	2.0	1	1	1	2	2	2	0	Ferric	uptake	regulator	family
MarR	PF01047.22	gi|284161941|ref|YP_003400564.1|	-	0.051	13.5	0.0	0.099	12.6	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_20	PF12840.7	gi|284161941|ref|YP_003400564.1|	-	0.11	12.5	0.1	0.35	11.0	0.0	1.9	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|284161941|ref|YP_003400564.1|	-	0.13	12.1	0.0	0.41	10.5	0.0	1.8	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
IF3_C	PF00707.22	gi|284161943|ref|YP_003400566.1|	-	0.04	13.9	0.1	0.041	13.8	0.1	1.1	1	0	0	1	1	1	0	Translation	initiation	factor	IF-3,	C-terminal	domain
HALZ	PF02183.18	gi|284161944|ref|YP_003400567.1|	-	0.00019	21.6	4.7	0.00051	20.2	4.7	1.7	1	0	0	1	1	1	1	Homeobox	associated	leucine	zipper
FlaC_arch	PF05377.11	gi|284161944|ref|YP_003400567.1|	-	0.00079	19.8	3.2	0.0037	17.6	1.6	2.5	3	0	0	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
DUF1640	PF07798.11	gi|284161944|ref|YP_003400567.1|	-	0.0033	17.5	2.9	0.0049	16.9	2.7	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1640)
SPESP1	PF15754.5	gi|284161944|ref|YP_003400567.1|	-	0.0056	15.9	0.0	0.0075	15.5	0.0	1.2	1	0	0	1	1	1	1	Sperm	equatorial	segment	protein	1
L_lactis_ph-MCP	PF06673.11	gi|284161944|ref|YP_003400567.1|	-	0.013	14.6	0.7	0.016	14.2	0.7	1.1	1	0	0	1	1	1	0	Lactococcus	lactis	bacteriophage	major	capsid	protein
AIP3	PF03915.13	gi|284161944|ref|YP_003400567.1|	-	0.014	14.6	0.6	0.016	14.3	0.6	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
Rsbr_N	PF08678.10	gi|284161944|ref|YP_003400567.1|	-	0.021	14.9	0.6	0.42	10.7	0.1	2.2	1	1	1	2	2	2	0	Rsbr	N	terminal
Hemerythrin	PF01814.23	gi|284161944|ref|YP_003400567.1|	-	0.021	15.4	2.3	0.037	14.6	2.2	1.4	1	1	0	1	1	1	0	Hemerythrin	HHE	cation	binding	domain
ZapB	PF06005.12	gi|284161944|ref|YP_003400567.1|	-	0.026	15.0	1.8	0.026	15.0	1.8	1.8	2	0	0	2	2	2	0	Cell	division	protein	ZapB
RPW8	PF05659.11	gi|284161944|ref|YP_003400567.1|	-	0.028	14.1	0.2	0.051	13.3	0.2	1.5	1	0	0	1	1	1	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Phage_GP20	PF06810.11	gi|284161944|ref|YP_003400567.1|	-	0.035	13.9	0.1	0.051	13.4	0.1	1.4	1	0	0	1	1	1	0	Phage	minor	structural	protein	GP20
COG2	PF06148.11	gi|284161944|ref|YP_003400567.1|	-	0.037	14.1	0.6	0.13	12.4	0.2	1.9	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DivIC	PF04977.15	gi|284161944|ref|YP_003400567.1|	-	0.059	13.1	1.3	0.059	13.1	1.3	1.6	2	0	0	2	2	2	0	Septum	formation	initiator
YabA	PF06156.13	gi|284161944|ref|YP_003400567.1|	-	0.063	13.9	1.2	0.17	12.5	0.5	2.0	2	0	0	2	2	2	0	Initiation	control	protein	YabA
FeoB_Cyto	PF17910.1	gi|284161944|ref|YP_003400567.1|	-	0.13	12.8	1.7	0.47	11.0	0.8	2.1	1	1	1	2	2	2	0	FeoB	cytosolic	helical	domain
bZIP_1	PF00170.21	gi|284161944|ref|YP_003400567.1|	-	0.77	9.9	9.4	0.089	12.9	4.5	2.1	2	1	0	2	2	1	0	bZIP	transcription	factor
DivIVA	PF05103.13	gi|284161944|ref|YP_003400567.1|	-	0.8	9.8	5.6	1.1	9.4	2.5	2.3	1	1	1	2	2	2	0	DivIVA	protein
MCM	PF00493.23	gi|284161945|ref|YP_003400568.1|	-	1.9e-90	301.9	0.1	3.1e-90	301.2	0.1	1.3	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_lid	PF17855.1	gi|284161945|ref|YP_003400568.1|	-	3.5e-26	91.5	4.0	1e-25	90.0	4.0	1.9	1	0	0	1	1	1	1	MCM	AAA-lid	domain
MCM_OB	PF17207.3	gi|284161945|ref|YP_003400568.1|	-	1.6e-21	76.4	0.2	2.9e-21	75.6	0.2	1.4	1	0	0	1	1	1	1	MCM	OB	domain
Mg_chelatase	PF01078.21	gi|284161945|ref|YP_003400568.1|	-	5.1e-12	45.6	0.2	6.5e-10	38.7	0.0	2.6	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|284161945|ref|YP_003400568.1|	-	6.9e-06	26.1	0.0	1.9e-05	24.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|284161945|ref|YP_003400568.1|	-	0.00025	20.9	0.0	0.00047	20.0	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zn-ribbon_8	PF09723.10	gi|284161945|ref|YP_003400568.1|	-	0.00029	20.9	0.6	0.00061	19.8	0.6	1.6	1	0	0	1	1	1	1	Zinc	ribbon	domain
MCM_N	PF14551.6	gi|284161945|ref|YP_003400568.1|	-	0.034	14.7	3.0	1	10.0	0.3	3.1	3	0	0	3	3	3	0	MCM	N-terminal	domain
DUF1451	PF07295.11	gi|284161945|ref|YP_003400568.1|	-	0.046	13.8	1.4	0.12	12.4	0.2	2.4	2	0	0	2	2	2	0	Zinc-ribbon	containing	domain
RPA_C	PF08784.11	gi|284161945|ref|YP_003400568.1|	-	0.061	14.0	0.0	0.18	12.5	0.0	1.8	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
P_proprotein	PF01483.20	gi|284161945|ref|YP_003400568.1|	-	0.11	12.6	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	Proprotein	convertase	P-domain
RNHCP	PF12647.7	gi|284161945|ref|YP_003400568.1|	-	0.33	11.0	1.1	0.63	10.1	1.1	1.4	1	0	0	1	1	1	0	RNHCP	domain
AAA_30	PF13604.6	gi|284161945|ref|YP_003400568.1|	-	0.37	10.5	3.6	0.23	11.1	0.5	2.2	2	0	0	2	2	2	0	AAA	domain
Zn_Tnp_IS1595	PF12760.7	gi|284161945|ref|YP_003400568.1|	-	0.43	10.6	1.6	5.5	7.0	0.5	2.4	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
DUF3801	PF12687.7	gi|284161945|ref|YP_003400568.1|	-	0.86	9.7	4.0	9.5	6.2	1.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3801)
zinc_ribbon_2	PF13240.6	gi|284161945|ref|YP_003400568.1|	-	1.4	8.8	3.4	16	5.4	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
ParE_toxin	PF05016.15	gi|284161945|ref|YP_003400568.1|	-	1.9	9.1	7.0	5.4	7.7	0.1	3.9	3	1	1	4	4	3	0	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
MinE	PF03776.14	gi|284161945|ref|YP_003400568.1|	-	2.3	8.3	6.9	0.65	10.0	1.0	2.9	3	0	0	3	3	3	0	Septum	formation	topological	specificity	factor	MinE
DUF3232	PF11554.8	gi|284161947|ref|YP_003400570.1|	-	0.014	15.8	0.4	0.38	11.1	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3232)
MarR_2	PF12802.7	gi|284161951|ref|YP_003400574.1|	-	0.00061	19.6	0.0	0.00086	19.2	0.0	1.3	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|284161951|ref|YP_003400574.1|	-	0.056	13.4	0.1	0.068	13.1	0.1	1.3	1	1	0	1	1	1	0	MarR	family
LexA_DNA_bind	PF01726.16	gi|284161951|ref|YP_003400574.1|	-	0.069	12.9	0.0	0.097	12.5	0.0	1.2	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Penicillinase_R	PF03965.16	gi|284161951|ref|YP_003400574.1|	-	0.1	13.0	0.0	0.13	12.6	0.0	1.1	1	0	0	1	1	1	0	Penicillinase	repressor
HP1451_C	PF18472.1	gi|284161952|ref|YP_003400575.1|	-	0.035	14.1	0.8	0.086	12.8	0.2	2.0	2	1	0	2	2	2	0	HP1451	C-terminal	domain
HTH_5	PF01022.20	gi|284161952|ref|YP_003400575.1|	-	0.041	13.8	0.2	0.12	12.3	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
CDC24_OB1	PF17246.2	gi|284161953|ref|YP_003400576.1|	-	0.12	12.4	0.0	0.18	11.9	0.0	1.1	1	0	0	1	1	1	0	Cell	division	control	protein	24,	OB	domain	1
Acyl-CoA_dh_2	PF08028.11	gi|284161953|ref|YP_003400576.1|	-	0.19	12.0	0.0	0.27	11.5	0.0	1.3	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase,	C-terminal	domain
Terminase_1	PF03354.15	gi|284161954|ref|YP_003400577.1|	-	0.06	11.9	0.0	0.074	11.6	0.0	1.0	1	0	0	1	1	1	0	Phage	Terminase
Resolvase	PF00239.21	gi|284161956|ref|YP_003400579.1|	-	4.4e-39	133.9	0.3	5.5e-39	133.6	0.3	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_32	PF13565.6	gi|284161956|ref|YP_003400579.1|	-	0.00014	22.4	3.1	0.00025	21.6	1.7	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
DUF5338	PF17273.2	gi|284161956|ref|YP_003400579.1|	-	0.0024	17.9	0.0	0.006	16.6	0.0	1.7	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5338)
HTH_Tnp_Tc3_2	PF01498.18	gi|284161956|ref|YP_003400579.1|	-	0.015	15.5	0.3	0.52	10.6	0.0	2.8	1	1	1	2	2	2	0	Transposase
ILEI	PF15711.5	gi|284161956|ref|YP_003400579.1|	-	0.14	12.7	0.0	0.83	10.2	0.0	2.1	1	1	1	2	2	2	0	Interleukin-like	EMT	inducer
BrnT_toxin	PF04365.13	gi|284161957|ref|YP_003400580.1|	-	5.3e-06	26.7	0.1	6.7e-06	26.3	0.1	1.2	1	0	0	1	1	1	1	Ribonuclease	toxin,	BrnT,	of	type	II	toxin-antitoxin	system
Tachylectin	PF14517.6	gi|284161957|ref|YP_003400580.1|	-	0.012	15.2	0.0	0.013	15.1	0.0	1.1	1	0	0	1	1	1	0	Tachylectin
Laminin_G_3	PF13385.6	gi|284161960|ref|YP_003400583.1|	-	9.5e-27	94.0	0.9	2.2e-26	92.8	0.9	1.6	1	0	0	1	1	1	1	Concanavalin	A-like	lectin/glucanases	superfamily
Toxin_R_bind_N	PF07953.12	gi|284161960|ref|YP_003400583.1|	-	0.00012	21.8	0.8	0.00031	20.5	0.2	2.0	2	1	0	2	2	2	1	Clostridium	neurotoxin,	N-terminal	receptor	binding
PepSY	PF03413.19	gi|284161961|ref|YP_003400584.1|	-	0.011	16.3	0.3	0.033	14.7	0.3	1.8	1	0	0	1	1	1	0	Peptidase	propeptide	and	YPEB	domain
FG-GAP	PF01839.23	gi|284161961|ref|YP_003400584.1|	-	0.24	11.6	4.0	6.8	6.9	0.3	2.8	2	0	0	2	2	2	0	FG-GAP	repeat
Big_9	PF17963.1	gi|284161961|ref|YP_003400584.1|	-	3.3	8.5	11.0	11	6.8	0.1	2.6	1	1	1	2	2	2	0	Bacterial	Ig	domain
Peptidase_S8	PF00082.22	gi|284161962|ref|YP_003400585.1|	-	7.1e-48	163.4	0.1	2.2e-47	161.7	0.1	1.6	1	1	0	1	1	1	1	Subtilase	family
Tk-SP_N-pro	PF18237.1	gi|284161962|ref|YP_003400585.1|	-	0.026	14.5	0.1	0.1	12.7	0.1	2.0	1	0	0	1	1	1	0	Tk-SP	N-propeptide	domain
ABC2_membrane_4	PF12730.7	gi|284161963|ref|YP_003400586.1|	-	0.085	12.8	7.3	0.12	12.3	7.3	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2949	PF11165.8	gi|284161963|ref|YP_003400586.1|	-	0.14	12.5	0.2	0.14	12.5	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2949)
DUF2628	PF10947.8	gi|284161963|ref|YP_003400586.1|	-	3.5	8.0	12.5	5.1	7.5	12.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
DUF3995	PF13160.6	gi|284161965|ref|YP_003400588.1|	-	0.067	13.6	0.9	0.071	13.5	0.9	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3995)
Form-deh_trans	PF09163.11	gi|284161969|ref|YP_003400592.1|	-	0.026	14.3	0.1	0.055	13.2	0.1	1.5	1	0	0	1	1	1	0	Formate	dehydrogenase	N,	transmembrane
DUF1430	PF07242.11	gi|284161969|ref|YP_003400592.1|	-	9	6.6	13.8	2.8	8.3	4.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1430)
Cnl2_NKP2	PF09447.10	gi|284161970|ref|YP_003400593.1|	-	0.014	15.6	0.0	0.033	14.3	0.0	1.7	1	0	0	1	1	1	0	Cnl2/NKP2	family	protein
SseB_C	PF14581.6	gi|284161972|ref|YP_003400595.1|	-	0.076	13.1	0.1	0.29	11.3	0.1	1.9	2	0	0	2	2	2	0	SseB	protein	C-terminal	domain
DUF1643	PF07799.12	gi|284161972|ref|YP_003400595.1|	-	0.1	12.8	0.0	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1643)
DNA_gyraseB	PF00204.25	gi|284161972|ref|YP_003400595.1|	-	0.11	11.9	0.5	0.47	9.9	0.2	2.0	1	1	1	2	2	2	0	DNA	gyrase	B
AAA_30	PF13604.6	gi|284161973|ref|YP_003400596.1|	-	0.002	17.9	0.1	0.0037	17.0	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284161973|ref|YP_003400596.1|	-	0.0028	17.9	0.0	0.0083	16.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
DUF87	PF01935.17	gi|284161973|ref|YP_003400596.1|	-	0.0044	17.1	2.4	0.029	14.5	0.3	2.8	3	1	1	4	4	4	1	Helicase	HerA,	central	domain
ABC_tran	PF00005.27	gi|284161973|ref|YP_003400596.1|	-	0.0053	17.3	0.0	0.0095	16.5	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
T2SSE	PF00437.20	gi|284161973|ref|YP_003400596.1|	-	0.011	14.8	0.1	0.016	14.2	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.18	gi|284161973|ref|YP_003400596.1|	-	0.049	13.4	0.0	0.096	12.4	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_18	PF13238.6	gi|284161973|ref|YP_003400596.1|	-	0.051	14.1	0.3	0.13	12.8	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|284161973|ref|YP_003400596.1|	-	0.055	13.2	0.2	0.21	11.4	0.0	2.0	2	1	1	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
Thymidylate_kin	PF02223.17	gi|284161973|ref|YP_003400596.1|	-	0.069	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	Thymidylate	kinase
AAA_10	PF12846.7	gi|284161973|ref|YP_003400596.1|	-	0.078	11.9	0.0	0.13	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
PduV-EutP	PF10662.9	gi|284161973|ref|YP_003400596.1|	-	0.095	12.4	0.0	0.16	11.7	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
OpuAC	PF04069.12	gi|284161973|ref|YP_003400596.1|	-	0.1	12.1	0.0	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Zeta_toxin	PF06414.12	gi|284161973|ref|YP_003400596.1|	-	0.11	11.7	0.1	0.25	10.6	0.1	1.5	1	0	0	1	1	1	0	Zeta	toxin
AAA_28	PF13521.6	gi|284161973|ref|YP_003400596.1|	-	0.12	12.7	0.1	0.3	11.3	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|284161973|ref|YP_003400596.1|	-	2.1	7.9	4.1	0.59	9.7	0.2	2.0	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
Cnn_1N	PF07989.11	gi|284161974|ref|YP_003400597.1|	-	7.7e-05	22.8	0.8	7.7e-05	22.8	0.8	2.7	3	0	0	3	3	2	1	Centrosomin	N-terminal	motif	1
Rootletin	PF15035.6	gi|284161974|ref|YP_003400597.1|	-	0.00012	22.2	4.9	0.00012	22.2	4.9	2.5	3	0	0	3	3	2	1	Ciliary	rootlet	component,	centrosome	cohesion
APG6_N	PF17675.1	gi|284161974|ref|YP_003400597.1|	-	0.00053	20.5	0.8	0.00053	20.5	0.8	2.8	2	1	1	3	3	2	1	Apg6	coiled-coil	region
UPF0242	PF06785.11	gi|284161974|ref|YP_003400597.1|	-	0.00056	20.1	8.0	0.00056	20.1	0.2	2.4	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
TMF_DNA_bd	PF12329.8	gi|284161974|ref|YP_003400597.1|	-	0.00095	19.1	8.8	0.00095	19.1	8.8	2.6	3	0	0	3	3	2	1	TATA	element	modulatory	factor	1	DNA	binding
CENP-Q	PF13094.6	gi|284161974|ref|YP_003400597.1|	-	0.001	19.3	3.8	0.001	19.3	3.8	2.2	2	1	0	2	2	2	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
JIP_LZII	PF16471.5	gi|284161974|ref|YP_003400597.1|	-	0.0011	19.0	8.4	0.0011	19.0	8.4	2.7	3	0	0	3	3	2	1	JNK-interacting	protein	leucine	zipper	II
GAS	PF13851.6	gi|284161974|ref|YP_003400597.1|	-	0.0016	17.9	6.2	0.0016	17.9	6.2	2.8	3	0	0	3	3	3	1	Growth-arrest	specific	micro-tubule	binding
ATG16	PF08614.11	gi|284161974|ref|YP_003400597.1|	-	0.0026	18.0	1.5	0.0026	18.0	1.5	2.0	2	0	0	2	2	2	1	Autophagy	protein	16	(ATG16)
ZapB	PF06005.12	gi|284161974|ref|YP_003400597.1|	-	0.0035	17.7	9.6	0.0035	17.7	9.6	3.3	3	0	0	3	3	3	1	Cell	division	protein	ZapB
MSC	PF09402.10	gi|284161974|ref|YP_003400597.1|	-	0.0037	16.8	1.8	0.0072	15.8	1.8	1.4	1	0	0	1	1	1	1	Man1-Src1p-C-terminal	domain
Spc29	PF17082.5	gi|284161974|ref|YP_003400597.1|	-	0.0054	16.6	1.6	0.0054	16.6	1.6	1.6	2	1	0	2	2	1	1	Spindle	Pole	Component	29
Leu_zip	PF15294.6	gi|284161974|ref|YP_003400597.1|	-	0.0077	15.8	3.7	0.0077	15.8	3.7	2.3	2	0	0	2	2	2	1	Leucine	zipper
YabA	PF06156.13	gi|284161974|ref|YP_003400597.1|	-	0.0077	16.8	3.2	0.0077	16.8	3.2	2.6	3	0	0	3	3	2	1	Initiation	control	protein	YabA
DUF4763	PF15960.5	gi|284161974|ref|YP_003400597.1|	-	0.0083	15.5	3.1	0.028	13.8	0.3	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4763)
bZIP_1	PF00170.21	gi|284161974|ref|YP_003400597.1|	-	0.011	15.8	8.8	0.011	15.8	8.8	2.6	2	0	0	2	2	2	0	bZIP	transcription	factor
DUF3450	PF11932.8	gi|284161974|ref|YP_003400597.1|	-	0.014	14.7	0.2	0.014	14.7	0.2	2.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Spc24	PF08286.11	gi|284161974|ref|YP_003400597.1|	-	0.019	15.2	11.3	0.27	11.5	3.0	3.0	2	1	1	3	3	3	0	Spc24	subunit	of	Ndc80
TMPIT	PF07851.13	gi|284161974|ref|YP_003400597.1|	-	0.023	14.0	1.0	0.16	11.2	0.1	2.2	2	0	0	2	2	2	0	TMPIT-like	protein
DivIC	PF04977.15	gi|284161974|ref|YP_003400597.1|	-	0.023	14.5	7.5	0.023	14.5	7.5	2.9	4	0	0	4	4	1	0	Septum	formation	initiator
Seadorna_VP6	PF07407.11	gi|284161974|ref|YP_003400597.1|	-	0.031	13.2	0.5	0.045	12.7	0.5	1.3	1	0	0	1	1	1	0	Seadornavirus	VP6	protein
DUF4795	PF16043.5	gi|284161974|ref|YP_003400597.1|	-	0.037	13.6	10.5	0.16	11.5	10.5	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
DUF5595	PF18077.1	gi|284161974|ref|YP_003400597.1|	-	0.039	14.0	5.5	0.039	14.0	5.5	3.8	3	1	1	4	4	3	0	Domain	of	unknown	function	(DUF5595)
DUF4201	PF13870.6	gi|284161974|ref|YP_003400597.1|	-	0.04	13.6	11.7	0.45	10.2	6.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
Exonuc_VII_L	PF02601.15	gi|284161974|ref|YP_003400597.1|	-	0.042	13.4	2.3	0.094	12.3	2.2	1.6	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
Nup54	PF13874.6	gi|284161974|ref|YP_003400597.1|	-	0.05	13.7	8.6	0.54	10.4	6.0	2.8	2	1	0	2	2	2	0	Nucleoporin	complex	subunit	54
Snapin_Pallidin	PF14712.6	gi|284161974|ref|YP_003400597.1|	-	0.05	14.0	8.5	0.42	11.1	2.3	3.0	3	0	0	3	3	2	0	Snapin/Pallidin
CASP_C	PF08172.12	gi|284161974|ref|YP_003400597.1|	-	0.054	12.8	0.3	0.054	12.8	0.3	1.7	2	0	0	2	2	1	0	CASP	C	terminal
BLOC1_2	PF10046.9	gi|284161974|ref|YP_003400597.1|	-	0.055	13.8	8.5	0.3	11.4	3.1	2.5	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
MctB	PF11382.8	gi|284161974|ref|YP_003400597.1|	-	0.066	12.9	0.9	0.13	12.0	0.9	1.4	1	0	0	1	1	1	0	Copper	transport	outer	membrane	protein,	MctB
Lectin_N	PF03954.14	gi|284161974|ref|YP_003400597.1|	-	0.067	12.9	0.1	0.15	11.8	0.1	1.6	1	0	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
EMP24_GP25L	PF01105.24	gi|284161974|ref|YP_003400597.1|	-	0.087	12.8	2.6	0.79	9.6	0.1	2.5	2	1	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
FokI_N	PF02981.15	gi|284161974|ref|YP_003400597.1|	-	0.089	13.0	0.8	0.19	11.9	0.8	1.5	1	0	0	1	1	1	0	Restriction	endonuclease	FokI,	recognition	domain
USP8_interact	PF08941.10	gi|284161974|ref|YP_003400597.1|	-	0.09	12.6	0.7	0.22	11.3	0.7	1.6	1	0	0	1	1	1	0	USP8	interacting
FPP	PF05911.11	gi|284161974|ref|YP_003400597.1|	-	0.092	10.9	9.6	0.013	13.7	4.8	1.8	2	0	0	2	2	2	0	Filament-like	plant	protein,	long	coiled-coil
RPT	PF13446.6	gi|284161974|ref|YP_003400597.1|	-	0.11	12.5	1.5	0.29	11.1	0.0	2.4	3	0	0	3	3	2	0	A	repeated	domain	in	UCH-protein
Prominin	PF05478.11	gi|284161974|ref|YP_003400597.1|	-	0.11	10.5	1.2	0.24	9.3	0.2	1.9	2	0	0	2	2	2	0	Prominin
Serine_rich	PF08824.10	gi|284161974|ref|YP_003400597.1|	-	0.11	12.5	2.2	0.26	11.3	0.6	2.3	3	0	0	3	3	2	0	Serine	rich	protein	interaction	domain
FapA	PF03961.13	gi|284161974|ref|YP_003400597.1|	-	0.11	11.1	5.1	0.14	10.7	0.1	2.3	2	1	0	2	2	2	0	Flagellar	Assembly	Protein	A
RNA_pol_A_CTD	PF03118.15	gi|284161974|ref|YP_003400597.1|	-	0.11	12.2	6.6	0.25	11.1	0.0	3.6	3	1	0	3	3	3	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
SlyX	PF04102.12	gi|284161974|ref|YP_003400597.1|	-	0.11	13.1	8.0	0.28	11.8	4.9	2.6	2	0	0	2	2	2	0	SlyX
PspA_IM30	PF04012.12	gi|284161974|ref|YP_003400597.1|	-	0.12	11.9	8.6	1.2	8.7	5.1	2.4	2	0	0	2	2	2	0	PspA/IM30	family
TolA_bind_tri	PF16331.5	gi|284161974|ref|YP_003400597.1|	-	0.12	12.4	5.9	0.09	12.9	3.2	2.1	2	0	0	2	2	1	0	TolA	binding	protein	trimerisation
DUF885	PF05960.11	gi|284161974|ref|YP_003400597.1|	-	0.13	11.9	4.5	1.6	8.3	4.5	2.0	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
Smac_DIABLO	PF09057.10	gi|284161974|ref|YP_003400597.1|	-	0.14	11.5	1.9	0.23	10.8	1.4	1.6	2	0	0	2	2	1	0	Second	Mitochondria-derived	Activator	of	Caspases
CREPT	PF16566.5	gi|284161974|ref|YP_003400597.1|	-	0.2	11.8	15.2	0.21	11.7	4.3	2.8	3	0	0	3	3	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
Syntaxin-6_N	PF09177.11	gi|284161974|ref|YP_003400597.1|	-	0.23	12.1	6.5	0.18	12.4	0.9	2.5	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
Laminin_II	PF06009.12	gi|284161974|ref|YP_003400597.1|	-	0.23	11.5	5.6	5.4	7.0	2.3	2.5	2	0	0	2	2	2	0	Laminin	Domain	II
Herpes_UL6	PF01763.16	gi|284161974|ref|YP_003400597.1|	-	0.27	9.7	4.5	0.15	10.6	2.4	1.5	2	0	0	2	2	2	0	Herpesvirus	UL6	like
Syntaxin_2	PF14523.6	gi|284161974|ref|YP_003400597.1|	-	0.31	11.4	6.2	0.31	11.4	0.9	2.5	3	0	0	3	3	2	0	Syntaxin-like	protein
ADIP	PF11559.8	gi|284161974|ref|YP_003400597.1|	-	0.38	10.8	10.6	0.86	9.7	7.8	2.5	2	1	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
HAP1_N	PF04849.13	gi|284161974|ref|YP_003400597.1|	-	0.44	9.7	14.8	0.12	11.6	7.9	2.7	2	1	0	2	2	2	0	HAP1	N-terminal	conserved	region
NRBF2	PF08961.10	gi|284161974|ref|YP_003400597.1|	-	0.55	9.8	13.7	0.11	12.1	9.8	1.9	2	1	0	2	2	1	0	Nuclear	receptor-binding	factor	2,	autophagy	regulator
Seryl_tRNA_N	PF02403.22	gi|284161974|ref|YP_003400597.1|	-	0.56	10.5	14.4	0.26	11.6	2.5	2.8	3	0	0	3	3	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Spc7	PF08317.11	gi|284161974|ref|YP_003400597.1|	-	0.67	8.8	18.7	0.063	12.2	5.1	2.7	2	1	0	2	2	2	0	Spc7	kinetochore	protein
YebO	PF13974.6	gi|284161974|ref|YP_003400597.1|	-	0.9	9.7	8.1	0.12	12.4	3.4	2.1	2	0	0	2	2	1	0	YebO-like	protein
Wtap	PF17098.5	gi|284161974|ref|YP_003400597.1|	-	0.9	9.5	11.2	0.38	10.7	5.1	2.4	2	0	0	2	2	2	0	WTAP/Mum2p	family
DIM	PF08194.12	gi|284161974|ref|YP_003400597.1|	-	1.2	9.4	2.6	2.2	8.6	2.6	1.4	1	0	0	1	1	1	0	DIM	protein
DUF5094	PF17015.5	gi|284161974|ref|YP_003400597.1|	-	1.3	9.1	9.4	1.9	8.6	4.3	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5094)
DUF4164	PF13747.6	gi|284161974|ref|YP_003400597.1|	-	1.5	9.1	14.7	0.046	14.0	6.4	2.5	3	0	0	3	3	1	0	Domain	of	unknown	function	(DUF4164)
DUF2205	PF10224.9	gi|284161974|ref|YP_003400597.1|	-	1.6	8.8	14.0	0.11	12.6	5.7	2.9	2	1	1	3	3	3	0	Short	coiled-coil	protein
Sec34	PF04136.15	gi|284161974|ref|YP_003400597.1|	-	1.9	8.3	8.0	1.3	8.9	1.5	2.8	3	0	0	3	3	3	0	Sec34-like	family
Rx_N	PF18052.1	gi|284161974|ref|YP_003400597.1|	-	2.5	8.4	10.3	4	7.8	4.9	2.4	2	0	0	2	2	2	0	Rx	N-terminal	domain
Cep57_MT_bd	PF06657.13	gi|284161974|ref|YP_003400597.1|	-	2.5	8.6	11.0	0.15	12.5	3.6	2.4	3	0	0	3	3	2	0	Centrosome	microtubule-binding	domain	of	Cep57
bZIP_2	PF07716.15	gi|284161974|ref|YP_003400597.1|	-	2.6	8.2	19.3	0.14	12.2	5.5	3.5	2	1	1	3	3	2	0	Basic	region	leucine	zipper
FlxA	PF14282.6	gi|284161974|ref|YP_003400597.1|	-	2.7	8.0	7.5	9.5	6.3	4.9	2.8	2	1	0	2	2	2	0	FlxA-like	protein
Mod_r	PF07200.13	gi|284161974|ref|YP_003400597.1|	-	2.8	8.0	13.4	0.35	11.0	3.8	2.6	3	0	0	3	3	2	0	Modifier	of	rudimentary	(Mod(r))	protein
TBCA	PF02970.16	gi|284161974|ref|YP_003400597.1|	-	3	8.2	15.5	4.9	7.5	5.1	3.2	3	0	0	3	3	3	0	Tubulin	binding	cofactor	A
DUF1664	PF07889.12	gi|284161974|ref|YP_003400597.1|	-	3	7.9	8.3	1.9	8.5	1.9	2.6	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF1664)
DUF677	PF05055.12	gi|284161974|ref|YP_003400597.1|	-	3	6.6	9.1	0.77	8.6	0.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF677)
DUF948	PF06103.11	gi|284161974|ref|YP_003400597.1|	-	3.6	7.9	8.7	12	6.2	1.1	3.2	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
GrpE	PF01025.19	gi|284161974|ref|YP_003400597.1|	-	4	7.1	14.5	0.2	11.3	2.3	2.5	2	1	0	2	2	2	0	GrpE
Cep57_CLD_2	PF14197.6	gi|284161974|ref|YP_003400597.1|	-	4.7	7.4	13.0	0.91	9.7	2.0	2.6	2	1	1	3	3	3	0	Centrosome	localisation	domain	of	PPC89
DUF4140	PF13600.6	gi|284161974|ref|YP_003400597.1|	-	5	7.6	9.8	2.6	8.5	3.1	3.1	3	1	0	3	3	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Uso1_p115_C	PF04871.13	gi|284161974|ref|YP_003400597.1|	-	6	7.3	14.7	0.13	12.7	3.2	2.9	3	0	0	3	3	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
KxDL	PF10241.9	gi|284161974|ref|YP_003400597.1|	-	6.7	7.1	11.9	3.1	8.2	2.7	2.6	3	0	0	3	3	2	0	Uncharacterized	conserved	protein
CdvA	PF18822.1	gi|284161974|ref|YP_003400597.1|	-	6.9	6.5	21.0	1.4	8.8	8.0	2.8	3	0	0	3	3	2	0	CdvA-like	coiled-coil	domain
Atg14	PF10186.9	gi|284161974|ref|YP_003400597.1|	-	8	5.4	12.7	0.63	9.1	6.6	1.9	1	1	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF641	PF04859.12	gi|284161974|ref|YP_003400597.1|	-	8.4	6.7	9.5	0.19	12.0	1.1	2.3	3	0	0	3	3	1	0	Plant	protein	of	unknown	function	(DUF641)
P4Ha_N	PF08336.11	gi|284161974|ref|YP_003400597.1|	-	8.7	6.4	12.8	0.49	10.4	2.3	2.6	3	0	0	3	3	2	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
HALZ	PF02183.18	gi|284161974|ref|YP_003400597.1|	-	9.1	6.6	16.1	0.35	11.1	9.3	2.2	2	0	0	2	2	1	0	Homeobox	associated	leucine	zipper
YtxH	PF12732.7	gi|284161974|ref|YP_003400597.1|	-	9.5	6.8	7.7	19	5.9	0.5	3.2	2	1	0	2	2	2	0	YtxH-like	protein
TusA	PF01206.17	gi|284161975|ref|YP_003400598.1|	-	0.012	15.4	0.0	0.017	15.0	0.0	1.2	1	0	0	1	1	1	0	Sulfurtransferase	TusA
Phage_integr_3	PF16795.5	gi|284161976|ref|YP_003400599.1|	-	2e-59	200.1	1.4	2e-59	200.1	1.4	1.8	3	0	0	3	3	3	1	Archaeal	phage	integrase
Phage_int_SAM_5	PF13102.6	gi|284161976|ref|YP_003400599.1|	-	0.068	13.5	2.0	2	8.8	0.0	3.4	4	0	0	4	4	4	0	Phage	integrase	SAM-like	domain
DUF2095	PF09868.9	gi|284161976|ref|YP_003400599.1|	-	0.072	13.1	0.5	0.14	12.1	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
DUF4635	PF15466.6	gi|284161976|ref|YP_003400599.1|	-	0.089	12.3	1.0	0.39	10.2	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4635)
Gp49	PF05973.14	gi|284161977|ref|YP_003400600.1|	-	0.00017	21.7	0.1	0.0002	21.4	0.1	1.0	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
ParE_toxin	PF05016.15	gi|284161977|ref|YP_003400600.1|	-	0.0011	19.5	0.1	0.0015	19.1	0.1	1.1	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
VAPB_antitox	PF02697.14	gi|284161978|ref|YP_003400601.1|	-	4.4e-06	27.4	4.5	5.7e-06	27.0	4.5	1.3	1	1	0	1	1	1	1	Putative	antitoxin
KELK	PF15796.5	gi|284161978|ref|YP_003400601.1|	-	0.0018	18.7	1.5	0.0024	18.3	1.5	1.1	1	0	0	1	1	1	1	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
RHH_1	PF01402.21	gi|284161978|ref|YP_003400601.1|	-	0.0019	18.1	1.7	0.0072	16.2	0.4	2.2	1	1	1	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
TMF_DNA_bd	PF12329.8	gi|284161978|ref|YP_003400601.1|	-	0.013	15.5	1.5	0.017	15.1	1.5	1.2	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
zf-CpG_bind_C	PF12269.8	gi|284161978|ref|YP_003400601.1|	-	0.1	12.4	0.6	0.11	12.2	0.6	1.0	1	0	0	1	1	1	0	CpG	binding	protein	zinc	finger	C	terminal	domain
RBD-FIP	PF09457.10	gi|284161978|ref|YP_003400601.1|	-	2.9	7.9	7.7	12	5.9	4.2	2.3	2	1	0	2	2	2	0	FIP	domain
DUF460	PF04312.13	gi|284161979|ref|YP_003400602.1|	-	3.8e-49	166.0	0.0	1.1e-48	164.5	0.0	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
UPF0242	PF06785.11	gi|284161979|ref|YP_003400602.1|	-	0.00011	22.4	12.9	0.00011	22.4	12.9	2.1	3	0	0	3	3	3	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
ATG16	PF08614.11	gi|284161979|ref|YP_003400602.1|	-	0.0023	18.2	9.1	0.004	17.4	9.1	1.4	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
DivIC	PF04977.15	gi|284161979|ref|YP_003400602.1|	-	0.018	14.8	14.7	0.28	11.0	1.2	3.4	3	0	0	3	3	3	0	Septum	formation	initiator
acVLRF1	PF18859.1	gi|284161979|ref|YP_003400602.1|	-	0.025	14.9	0.5	0.061	13.6	0.0	1.9	2	0	0	2	2	2	0	Actinobacteria/chloroflexi	VLRF1	release	factor
Exonuc_VII_L	PF02601.15	gi|284161979|ref|YP_003400602.1|	-	0.17	11.4	7.0	0.42	10.1	7.0	1.6	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
MscS_porin	PF12795.7	gi|284161979|ref|YP_003400602.1|	-	0.41	10.2	7.9	0.75	9.3	7.9	1.4	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
DUF4407	PF14362.6	gi|284161979|ref|YP_003400602.1|	-	0.49	9.7	4.5	0.89	8.8	4.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
kleA_kleC	PF17383.2	gi|284161979|ref|YP_003400602.1|	-	0.54	10.6	8.2	1.8	8.9	2.0	2.9	1	1	1	2	2	2	0	Uncharacterized	KorC	regulated	protein	A
TMF_DNA_bd	PF12329.8	gi|284161979|ref|YP_003400602.1|	-	1	9.4	31.4	0.32	11.0	9.3	3.9	2	1	2	4	4	4	0	TATA	element	modulatory	factor	1	DNA	binding
FIN1	PF17300.2	gi|284161979|ref|YP_003400602.1|	-	5.7	6.4	16.2	12	5.3	16.2	1.6	1	0	0	1	1	1	0	Filaments	in	between	nuclei	protein-1
SlyX	PF04102.12	gi|284161979|ref|YP_003400602.1|	-	7	7.3	7.7	18	6.1	0.3	3.0	3	0	0	3	3	3	0	SlyX
Exosortase_EpsH	PF09721.10	gi|284161980|ref|YP_003400603.1|	-	8.7e-11	41.8	17.7	1e-10	41.6	17.7	1.1	1	0	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
PS_Dcarbxylase	PF02666.15	gi|284161981|ref|YP_003400604.1|	-	1.1e-27	96.9	2.6	5e-24	85.0	0.8	2.0	1	1	1	2	2	2	2	Phosphatidylserine	decarboxylase
Biotin_lipoyl	PF00364.22	gi|284161981|ref|YP_003400604.1|	-	0.00011	21.9	3.0	3.4	7.6	0.1	3.8	3	1	1	4	4	4	3	Biotin-requiring	enzyme
Peptidase_M23	PF01551.22	gi|284161981|ref|YP_003400604.1|	-	0.00026	21.2	1.0	0.12	12.7	0.1	3.1	1	1	0	2	2	2	1	Peptidase	family	M23
PYNP_C	PF07831.13	gi|284161981|ref|YP_003400604.1|	-	0.00059	19.4	0.5	0.035	13.7	0.2	2.3	1	1	1	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
PTS_EIIA_1	PF00358.20	gi|284161981|ref|YP_003400604.1|	-	0.0029	17.3	0.5	10	5.9	0.1	3.3	1	1	2	3	3	3	2	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
Biotin_lipoyl_2	PF13533.6	gi|284161981|ref|YP_003400604.1|	-	0.003	17.3	0.5	5.5	6.9	0.0	3.4	3	0	0	3	3	3	2	Biotin-lipoyl	like
RnfC_N	PF13375.6	gi|284161981|ref|YP_003400604.1|	-	0.0056	16.6	0.7	1.2	9.2	0.0	2.9	1	1	2	3	3	3	1	RnfC	Barrel	sandwich	hybrid	domain
DUF2118	PF09891.9	gi|284161981|ref|YP_003400604.1|	-	0.038	13.9	2.7	0.8	9.7	0.2	2.8	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Apocytochr_F_C	PF01333.19	gi|284161981|ref|YP_003400604.1|	-	0.057	13.5	0.0	7.3	6.7	0.0	2.3	1	1	1	2	2	2	0	Apocytochrome	F,	C-terminal
CDP-OH_P_transf	PF01066.21	gi|284161982|ref|YP_003400605.1|	-	1.1e-10	42.1	1.4	1.1e-10	42.1	1.4	2.9	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DHNA	PF04038.12	gi|284161983|ref|YP_003400606.1|	-	2e-38	131.2	0.0	2.4e-38	131.0	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
MRP-S26	PF14943.6	gi|284161984|ref|YP_003400607.1|	-	0.0035	17.3	0.2	0.004	17.1	0.2	1.1	1	0	0	1	1	1	1	Mitochondrial	ribosome	subunit	S26
SurE	PF01975.17	gi|284161985|ref|YP_003400608.1|	-	3.2e-51	173.9	0.0	3.9e-51	173.6	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
Rib_5-P_isom_A	PF06026.14	gi|284161986|ref|YP_003400609.1|	-	1.1e-63	213.9	0.0	1.4e-63	213.6	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|284161986|ref|YP_003400609.1|	-	4.2e-07	30.0	0.2	1.9e-05	24.7	0.0	2.1	1	1	1	2	2	2	1	DeoR	C	terminal	sensor	domain
WG_beta_rep	PF14903.6	gi|284161986|ref|YP_003400609.1|	-	0.03	14.6	0.3	0.079	13.3	0.3	1.7	1	0	0	1	1	1	0	WG	containing	repeat
Sugar-bind	PF04198.13	gi|284161986|ref|YP_003400609.1|	-	0.054	12.6	0.0	0.081	12.0	0.0	1.2	1	0	0	1	1	1	0	Putative	sugar-binding	domain
Rubredoxin	PF00301.20	gi|284161987|ref|YP_003400610.1|	-	4.7e-06	26.5	9.5	0.0013	18.7	9.5	2.1	1	1	0	1	1	1	1	Rubredoxin
RecR	PF02132.15	gi|284161987|ref|YP_003400610.1|	-	0.0051	16.4	2.6	0.011	15.3	2.6	1.5	1	1	0	1	1	1	1	RecR	protein
Zn_Tnp_IS1595	PF12760.7	gi|284161987|ref|YP_003400610.1|	-	0.0054	16.7	2.9	0.2	11.7	0.4	2.2	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|284161987|ref|YP_003400610.1|	-	0.014	15.5	5.2	0.025	14.7	5.2	1.6	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-RRN7	PF11781.8	gi|284161987|ref|YP_003400610.1|	-	0.015	15.0	0.2	0.015	15.0	0.2	2.2	2	1	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
HypA	PF01155.19	gi|284161987|ref|YP_003400610.1|	-	0.018	15.1	0.8	0.018	15.1	0.8	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-C2H2_4	PF13894.6	gi|284161987|ref|YP_003400610.1|	-	0.032	15.1	3.8	4.3	8.4	0.6	2.3	2	1	0	2	2	2	0	C2H2-type	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|284161987|ref|YP_003400610.1|	-	0.033	13.7	7.1	0.3	10.6	0.6	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.6	gi|284161987|ref|YP_003400610.1|	-	0.049	14.1	3.8	3.4	8.3	0.2	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Desulfoferrod_N	PF06397.12	gi|284161987|ref|YP_003400610.1|	-	0.073	12.7	5.6	0.82	9.3	1.1	2.1	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-C2H2	PF00096.26	gi|284161987|ref|YP_003400610.1|	-	0.091	13.3	5.1	2.1	9.0	0.5	2.4	2	1	0	2	2	2	0	Zinc	finger,	C2H2	type
A2L_zn_ribbon	PF08792.10	gi|284161987|ref|YP_003400610.1|	-	0.16	11.8	5.5	2.3	8.1	0.4	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-nanos	PF05741.13	gi|284161987|ref|YP_003400610.1|	-	0.22	11.8	3.2	1	9.6	0.1	2.1	1	1	1	2	2	2	0	Nanos	RNA	binding	domain
NRDD	PF13597.6	gi|284161987|ref|YP_003400610.1|	-	0.23	10.2	1.8	0.25	10.1	1.8	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-C2H2_6	PF13912.6	gi|284161987|ref|YP_003400610.1|	-	0.27	11.3	3.5	10	6.2	0.5	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Rubredoxin_2	PF18073.1	gi|284161987|ref|YP_003400610.1|	-	0.32	10.8	6.0	0.75	9.6	1.7	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zf-Di19	PF05605.12	gi|284161987|ref|YP_003400610.1|	-	0.69	10.2	3.8	2.2	8.6	3.8	1.9	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
C1_2	PF03107.16	gi|284161987|ref|YP_003400610.1|	-	0.97	9.8	6.3	11	6.4	2.0	2.1	1	1	1	2	2	2	0	C1	domain
ADK_lid	PF05191.14	gi|284161987|ref|YP_003400610.1|	-	1	9.4	4.2	1.9	8.5	4.2	1.5	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-Mss51	PF13824.6	gi|284161987|ref|YP_003400610.1|	-	1.2	9.3	5.1	7.7	6.7	0.6	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
VATC	PF18716.1	gi|284161987|ref|YP_003400610.1|	-	1.3	8.9	8.8	5	7.1	8.2	2.0	1	1	1	2	2	2	0	Vms1-associating	treble	clef	domain
Methyltransf_25	PF13649.6	gi|284161988|ref|YP_003400611.1|	-	6.6e-22	78.0	0.0	9.7e-22	77.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284161988|ref|YP_003400611.1|	-	4.2e-20	72.2	0.0	6.1e-20	71.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|284161988|ref|YP_003400611.1|	-	3.1e-17	62.7	0.0	6.5e-15	55.1	0.0	2.1	1	1	1	2	2	2	2	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.6	gi|284161988|ref|YP_003400611.1|	-	8.9e-17	61.3	0.0	1.1e-16	61.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|284161988|ref|YP_003400611.1|	-	1.2e-10	41.5	0.0	1.5e-10	41.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284161988|ref|YP_003400611.1|	-	1.8e-10	41.4	0.0	2.7e-10	40.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|284161988|ref|YP_003400611.1|	-	3.8e-06	26.8	0.1	8.5e-06	25.7	0.0	1.5	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.20	gi|284161988|ref|YP_003400611.1|	-	2.4e-05	23.7	0.0	4.1e-05	23.0	0.0	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_9	PF08003.11	gi|284161988|ref|YP_003400611.1|	-	3.8e-05	22.8	0.0	0.00014	20.9	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
RrnaAD	PF00398.20	gi|284161988|ref|YP_003400611.1|	-	0.00039	19.6	0.0	0.00053	19.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
FtsJ	PF01728.19	gi|284161988|ref|YP_003400611.1|	-	0.0014	18.8	0.0	0.0027	17.9	0.0	1.4	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_4	PF02390.17	gi|284161988|ref|YP_003400611.1|	-	0.014	14.9	0.0	0.028	13.9	0.0	1.5	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_29	PF03141.16	gi|284161988|ref|YP_003400611.1|	-	0.021	13.4	0.0	0.026	13.1	0.0	1.1	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
MetW	PF07021.12	gi|284161988|ref|YP_003400611.1|	-	0.07	12.7	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.7	gi|284161988|ref|YP_003400611.1|	-	0.097	12.6	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Met_10	PF02475.16	gi|284161988|ref|YP_003400611.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Ribosomal_S6e	PF01092.19	gi|284161989|ref|YP_003400612.1|	-	5.6e-43	145.9	0.1	6.3e-43	145.7	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
Shikimate_dh_N	PF08501.11	gi|284161990|ref|YP_003400613.1|	-	7.9e-29	99.7	0.0	1.6e-28	98.8	0.0	1.5	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
SDH_C	PF18317.1	gi|284161990|ref|YP_003400613.1|	-	3.6e-15	55.4	0.1	6.6e-15	54.6	0.1	1.5	1	0	0	1	1	1	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Shikimate_DH	PF01488.20	gi|284161990|ref|YP_003400613.1|	-	1.9e-08	34.5	0.0	3.2e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|284161990|ref|YP_003400613.1|	-	0.0081	15.8	0.0	0.014	15.0	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
adh_short	PF00106.25	gi|284161990|ref|YP_003400613.1|	-	0.027	13.9	0.2	0.38	10.2	0.2	2.3	1	1	0	1	1	1	0	short	chain	dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|284161990|ref|YP_003400613.1|	-	0.043	14.1	0.1	0.12	12.6	0.1	1.9	1	1	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
THF_DHG_CYH_C	PF02882.19	gi|284161990|ref|YP_003400613.1|	-	0.052	12.9	0.0	0.31	10.3	0.0	1.9	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_7	PF13241.6	gi|284161990|ref|YP_003400613.1|	-	0.12	12.8	0.0	0.26	11.8	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|284161990|ref|YP_003400613.1|	-	0.17	11.3	0.0	0.34	10.2	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrmB	PF01978.19	gi|284161991|ref|YP_003400614.1|	-	5.6e-06	26.2	0.6	8.8e-06	25.5	0.4	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284161991|ref|YP_003400614.1|	-	0.00019	21.3	0.1	0.00051	19.9	0.0	1.7	1	1	1	2	2	2	1	MarR	family
TFIIE_alpha	PF02002.17	gi|284161991|ref|YP_003400614.1|	-	0.00055	19.7	6.6	0.00067	19.5	6.6	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_34	PF13601.6	gi|284161991|ref|YP_003400614.1|	-	0.0023	18.1	0.1	0.0038	17.4	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|284161991|ref|YP_003400614.1|	-	0.0024	17.8	0.1	0.0043	17.0	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
SMC_ScpB	PF04079.16	gi|284161991|ref|YP_003400614.1|	-	0.0041	16.8	0.3	0.0073	15.9	0.2	1.6	1	1	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
HTH_27	PF13463.6	gi|284161991|ref|YP_003400614.1|	-	0.0087	16.5	0.1	0.023	15.2	0.1	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.22	gi|284161991|ref|YP_003400614.1|	-	0.029	14.3	0.3	0.075	13.0	0.0	1.9	2	0	0	2	2	2	0	MarR	family
HTH_Crp_2	PF13545.6	gi|284161991|ref|YP_003400614.1|	-	0.081	12.9	0.3	0.82	9.7	0.1	2.6	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
Hydrolase_3	PF08282.12	gi|284161991|ref|YP_003400614.1|	-	0.083	12.6	0.4	0.094	12.4	0.4	1.1	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
DUF2250	PF10007.9	gi|284161991|ref|YP_003400614.1|	-	0.11	12.6	3.3	0.29	11.3	0.1	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Nup88	PF10168.9	gi|284161991|ref|YP_003400614.1|	-	0.11	10.3	6.8	0.12	10.2	6.8	1.0	1	0	0	1	1	1	0	Nuclear	pore	component
SecE	PF00584.20	gi|284161992|ref|YP_003400615.1|	-	7.2e-08	32.2	0.7	8.7e-08	32.0	0.7	1.0	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Spt5-NGN	PF03439.13	gi|284161993|ref|YP_003400616.1|	-	2.9e-23	81.6	0.1	5.1e-23	80.8	0.1	1.4	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|284161993|ref|YP_003400616.1|	-	6.5e-07	29.1	1.0	3.5e-06	26.8	0.1	2.3	2	0	0	2	2	2	1	KOW	motif
NusG	PF02357.19	gi|284161993|ref|YP_003400616.1|	-	0.014	15.9	1.5	0.1	13.1	0.5	2.5	1	1	1	2	2	2	0	Transcription	termination	factor	nusG
Ribosomal_L11_N	PF03946.14	gi|284161994|ref|YP_003400617.1|	-	1.1e-27	95.6	1.2	2.2e-27	94.7	0.7	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|284161994|ref|YP_003400617.1|	-	2.2e-24	85.8	2.7	3.7e-24	85.0	2.7	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
ApoLp-III	PF07464.11	gi|284161996|ref|YP_003400619.1|	-	0.00049	20.2	5.9	0.01	15.9	0.1	3.2	2	1	1	3	3	3	1	Apolipophorin-III	precursor	(apoLp-III)
Gp5_C	PF06715.12	gi|284161996|ref|YP_003400619.1|	-	0.011	15.9	1.6	0.011	15.9	1.6	5.5	5	2	1	6	6	6	0	Gp5	C-terminal	repeat	(3	copies)
Apolipoprotein	PF01442.18	gi|284161996|ref|YP_003400619.1|	-	0.025	14.5	5.7	0.12	12.2	0.8	2.2	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
Mod_r	PF07200.13	gi|284161996|ref|YP_003400619.1|	-	0.085	13.0	0.3	0.085	13.0	0.3	2.6	2	1	1	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
Nop25	PF09805.9	gi|284161996|ref|YP_003400619.1|	-	0.15	12.5	7.2	0.37	11.3	7.2	1.6	1	0	0	1	1	1	0	Nucleolar	protein	12	(25kDa)
Aha1_N	PF09229.11	gi|284161996|ref|YP_003400619.1|	-	0.18	12.0	4.9	0.5	10.6	1.9	2.8	2	1	0	2	2	2	0	Activator	of	Hsp90	ATPase,	N-terminal
RNA_polI_A14	PF08203.11	gi|284161996|ref|YP_003400619.1|	-	0.35	11.6	2.5	2.6	8.8	0.1	3.1	3	0	0	3	3	3	0	Yeast	RNA	polymerase	I	subunit	RPA14
Spectrin	PF00435.21	gi|284161996|ref|YP_003400619.1|	-	0.36	11.3	10.4	14	6.2	3.2	3.3	3	0	0	3	3	3	0	Spectrin	repeat
AAA_23	PF13476.6	gi|284161996|ref|YP_003400619.1|	-	0.53	10.8	10.4	0.23	11.9	7.2	2.0	2	1	0	2	2	2	0	AAA	domain
Phe_tRNA-synt_N	PF02912.18	gi|284161996|ref|YP_003400619.1|	-	1.5	8.8	5.7	2.9	7.9	3.4	2.7	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
DUF349	PF03993.12	gi|284161996|ref|YP_003400619.1|	-	1.8	8.9	9.7	4.2	7.7	0.2	3.4	2	2	0	2	2	2	0	Domain	of	Unknown	Function	(DUF349)
AAA_11	PF13086.6	gi|284161996|ref|YP_003400619.1|	-	2.4	7.8	7.2	6.7	6.4	4.2	2.1	2	0	0	2	2	2	0	AAA	domain
HTH_24	PF13412.6	gi|284161997|ref|YP_003400620.1|	-	1.7e-05	24.3	0.2	3.3e-05	23.3	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|284161997|ref|YP_003400620.1|	-	4.5e-05	23.3	0.1	7e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.6	gi|284161997|ref|YP_003400620.1|	-	6e-05	23.1	0.0	0.00015	21.9	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|284161997|ref|YP_003400620.1|	-	0.00021	21.1	0.0	0.00039	20.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
EAP30	PF04157.16	gi|284161997|ref|YP_003400620.1|	-	0.00047	19.5	0.0	0.00047	19.5	0.0	1.1	1	0	0	1	1	1	1	EAP30/Vps36	family
HTH_IclR	PF09339.10	gi|284161997|ref|YP_003400620.1|	-	0.00049	19.9	0.2	0.00088	19.0	0.2	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_27	PF13463.6	gi|284161997|ref|YP_003400620.1|	-	0.0016	18.9	0.2	0.0048	17.4	0.0	1.8	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|284161997|ref|YP_003400620.1|	-	0.0095	15.8	0.1	0.0095	15.8	0.1	2.8	3	1	1	4	4	4	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|284161997|ref|YP_003400620.1|	-	0.016	15.2	0.0	0.025	14.6	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_53	PF18606.1	gi|284161997|ref|YP_003400620.1|	-	0.031	14.0	0.4	1.9	8.2	0.1	2.8	2	1	1	3	3	3	0	Zap	helix	turn	helix	N-terminal	domain
Penicillinase_R	PF03965.16	gi|284161997|ref|YP_003400620.1|	-	0.061	13.7	0.0	0.097	13.0	0.0	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
AbiEi_4	PF13338.6	gi|284161997|ref|YP_003400620.1|	-	0.076	13.2	0.3	0.18	12.0	0.3	1.7	1	0	0	1	1	1	0	Transcriptional	regulator,	AbiEi	antitoxin
HTH_20	PF12840.7	gi|284161997|ref|YP_003400620.1|	-	0.095	12.8	0.2	0.16	12.1	0.2	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Gram_pos_anchor	PF00746.21	gi|284161997|ref|YP_003400620.1|	-	0.1	12.5	0.0	0.1	12.5	0.0	2.1	3	0	0	3	3	3	0	LPXTG	cell	wall	anchor	motif
HD	PF01966.22	gi|284161998|ref|YP_003400621.1|	-	4.5e-10	39.8	1.0	4.5e-10	39.8	1.0	2.0	2	0	0	2	2	2	1	HD	domain
HDOD	PF08668.12	gi|284161998|ref|YP_003400621.1|	-	0.0079	15.7	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
Lactamase_B_2	PF12706.7	gi|284161999|ref|YP_003400622.1|	-	7.9e-08	32.1	0.0	1.8e-07	30.8	0.0	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|284161999|ref|YP_003400622.1|	-	1.1e-07	31.9	0.0	1.6e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284161999|ref|YP_003400622.1|	-	9.1e-07	29.1	0.1	2e-06	27.9	0.1	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
BtrH_N	PF14399.6	gi|284161999|ref|YP_003400622.1|	-	0.04	14.2	0.0	7.3	6.9	0.0	2.3	2	0	0	2	2	2	0	Butirosin	biosynthesis	protein	H,	N-terminal
DUF2096	PF09869.9	gi|284161999|ref|YP_003400622.1|	-	0.055	13.5	0.2	0.13	12.3	0.2	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
Ribosomal_L10	PF00466.20	gi|284161999|ref|YP_003400622.1|	-	0.075	13.2	0.8	0.19	11.9	0.1	2.0	2	0	0	2	2	2	0	Ribosomal	protein	L10
UDPG_MGDP_dh_C	PF03720.15	gi|284161999|ref|YP_003400622.1|	-	0.095	13.1	0.1	4.3	7.8	0.1	2.3	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Thymidylate_kin	PF02223.17	gi|284161999|ref|YP_003400622.1|	-	0.12	12.0	0.0	1.3	8.6	0.1	2.2	2	0	0	2	2	2	0	Thymidylate	kinase
DHH	PF01368.20	gi|284161999|ref|YP_003400622.1|	-	0.12	12.6	0.1	5.7	7.2	0.0	2.4	2	0	0	2	2	2	0	DHH	family
RAMP4	PF06624.12	gi|284162000|ref|YP_003400623.1|	-	1	9.5	3.2	1.6	8.8	3.2	1.3	1	0	0	1	1	1	0	Ribosome	associated	membrane	protein	RAMP4
BPD_transp_1	PF00528.22	gi|284162002|ref|YP_003400625.1|	-	0.2	11.4	9.5	0.035	13.8	4.8	1.8	2	0	0	2	2	2	0	Binding-protein-dependent	transport	system	inner	membrane	component
Laminin_G_3	PF13385.6	gi|284162003|ref|YP_003400626.1|	-	1.4e-34	119.5	2.1	9.7e-33	113.5	0.0	2.8	2	0	0	2	2	2	1	Concanavalin	A-like	lectin/glucanases	superfamily
Sialidase	PF02973.16	gi|284162003|ref|YP_003400626.1|	-	0.011	15.2	0.7	0.14	11.6	0.1	2.8	2	1	0	2	2	2	0	Sialidase,	N-terminal	domain
CHU_C	PF13585.6	gi|284162003|ref|YP_003400626.1|	-	0.032	14.3	0.5	0.032	14.3	0.5	3.7	4	0	0	4	4	4	0	C-terminal	domain	of	CHU	protein	family
GTP1_OBG	PF01018.22	gi|284162003|ref|YP_003400626.1|	-	0.066	12.8	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	GTP1/OBG
Tmemb_14	PF03647.13	gi|284162003|ref|YP_003400626.1|	-	1.3	9.8	5.0	0.36	11.6	1.3	1.9	2	0	0	2	2	2	0	Transmembrane	proteins	14C
DUF4383	PF14325.6	gi|284162003|ref|YP_003400626.1|	-	1.7	9.0	7.1	1.9	8.8	3.6	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4383)
MFS_1	PF07690.16	gi|284162003|ref|YP_003400626.1|	-	2.9	6.7	10.4	0.11	11.3	4.5	1.5	2	0	0	2	2	2	0	Major	Facilitator	Superfamily
DUF389	PF04087.14	gi|284162004|ref|YP_003400627.1|	-	0.031	14.3	0.1	0.034	14.2	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF389)
SRC-1	PF08832.10	gi|284162005|ref|YP_003400628.1|	-	0.19	12.8	0.7	0.5	11.4	0.7	1.7	1	0	0	1	1	1	0	Steroid	receptor	coactivator
AAA_15	PF13175.6	gi|284162006|ref|YP_003400629.1|	-	0.00015	21.6	0.0	0.0002	21.2	0.0	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
ABC_tran	PF00005.27	gi|284162006|ref|YP_003400629.1|	-	0.0005	20.6	0.0	0.00082	19.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
T2SSE	PF00437.20	gi|284162006|ref|YP_003400629.1|	-	0.00084	18.5	0.0	0.0014	17.8	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_16	PF13191.6	gi|284162006|ref|YP_003400629.1|	-	0.00088	19.7	0.0	0.0016	18.8	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|284162006|ref|YP_003400629.1|	-	0.0014	18.6	0.1	0.0033	17.4	0.1	1.7	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
NTPase_1	PF03266.15	gi|284162006|ref|YP_003400629.1|	-	0.0016	18.4	0.0	0.0037	17.2	0.0	1.6	2	0	0	2	2	1	1	NTPase
AAA	PF00004.29	gi|284162006|ref|YP_003400629.1|	-	0.0043	17.5	0.0	3.9	7.9	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.12	gi|284162006|ref|YP_003400629.1|	-	0.0066	16.4	0.0	0.064	13.2	0.0	2.2	2	0	0	2	2	2	1	NACHT	domain
AAA_23	PF13476.6	gi|284162006|ref|YP_003400629.1|	-	0.0072	16.8	0.1	0.013	16.1	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.11	gi|284162006|ref|YP_003400629.1|	-	0.0082	14.8	0.0	0.014	14.1	0.0	1.3	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
ATPase	PF06745.13	gi|284162006|ref|YP_003400629.1|	-	0.0092	15.3	0.1	0.019	14.3	0.1	1.5	1	0	0	1	1	1	1	KaiC
G-alpha	PF00503.20	gi|284162006|ref|YP_003400629.1|	-	0.0096	15.1	0.0	0.16	11.1	0.0	2.0	1	1	0	2	2	2	1	G-protein	alpha	subunit
Pox_A32	PF04665.12	gi|284162006|ref|YP_003400629.1|	-	0.012	15.1	0.1	0.029	13.8	0.1	1.6	1	0	0	1	1	1	0	Poxvirus	A32	protein
TsaE	PF02367.17	gi|284162006|ref|YP_003400629.1|	-	0.014	15.4	0.1	0.03	14.3	0.1	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_29	PF13555.6	gi|284162006|ref|YP_003400629.1|	-	0.015	15.0	0.1	0.035	13.8	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.6	gi|284162006|ref|YP_003400629.1|	-	0.016	15.5	0.0	0.059	13.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|284162006|ref|YP_003400629.1|	-	0.018	14.0	0.0	0.035	13.0	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
KAP_NTPase	PF07693.14	gi|284162006|ref|YP_003400629.1|	-	0.019	14.2	0.0	0.02	14.1	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
APS_kinase	PF01583.20	gi|284162006|ref|YP_003400629.1|	-	0.025	14.5	0.1	0.044	13.7	0.1	1.5	1	1	0	1	1	1	0	Adenylylsulphate	kinase
AAA_28	PF13521.6	gi|284162006|ref|YP_003400629.1|	-	0.028	14.6	0.0	0.049	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.19	gi|284162006|ref|YP_003400629.1|	-	0.029	14.0	0.1	0.05	13.2	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Zeta_toxin	PF06414.12	gi|284162006|ref|YP_003400629.1|	-	0.029	13.6	0.1	0.17	11.2	0.1	2.1	1	1	1	2	2	2	0	Zeta	toxin
CLP1_P	PF16575.5	gi|284162006|ref|YP_003400629.1|	-	0.089	12.6	0.0	0.16	11.8	0.0	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_24	PF13479.6	gi|284162006|ref|YP_003400629.1|	-	0.094	12.4	0.0	0.16	11.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.23	gi|284162006|ref|YP_003400629.1|	-	0.11	12.6	0.0	0.21	11.7	0.0	1.5	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MobB	PF03205.14	gi|284162006|ref|YP_003400629.1|	-	0.11	12.4	0.0	0.37	10.7	0.0	1.9	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DAP3	PF10236.9	gi|284162006|ref|YP_003400629.1|	-	0.12	11.6	0.0	0.17	11.0	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_11	PF13086.6	gi|284162006|ref|YP_003400629.1|	-	0.15	11.9	0.0	0.23	11.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284162006|ref|YP_003400629.1|	-	0.21	11.3	0.0	0.37	10.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Rep_2	PF01719.17	gi|284162007|ref|YP_003400630.1|	-	0.12	12.1	0.5	0.21	11.4	0.4	1.4	1	1	0	1	1	1	0	Plasmid	replication	protein
DUF2755	PF10954.8	gi|284162008|ref|YP_003400631.1|	-	0.41	10.6	2.6	1.7	8.6	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2755)
DUF1211	PF06736.11	gi|284162010|ref|YP_003400633.1|	-	0.44	11.0	4.3	0.83	10.1	4.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1211)
DHHC	PF01529.20	gi|284162010|ref|YP_003400633.1|	-	0.84	9.8	6.3	0.31	11.1	3.9	1.5	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
DUF4131	PF13567.6	gi|284162010|ref|YP_003400633.1|	-	9	5.9	7.9	1.4	8.5	1.8	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Bac_export_2	PF01312.19	gi|284162011|ref|YP_003400634.1|	-	0.32	10.2	5.4	0.074	12.2	0.4	1.9	2	0	0	2	2	2	0	FlhB	HrpN	YscU	SpaS	Family
LapA_dom	PF06305.11	gi|284162011|ref|YP_003400634.1|	-	0.5	10.2	13.3	4.9	7.0	0.7	3.1	3	0	0	3	3	3	0	Lipopolysaccharide	assembly	protein	A	domain
DUF2749	PF10907.8	gi|284162011|ref|YP_003400634.1|	-	0.94	9.7	5.6	3.2	8.0	1.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2749)
Trp_oprn_chp	PF09534.10	gi|284162011|ref|YP_003400634.1|	-	1.5	8.6	6.7	0.92	9.3	0.2	2.1	2	0	0	2	2	2	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
DUF2207	PF09972.9	gi|284162011|ref|YP_003400634.1|	-	9	4.9	6.5	1.7	7.3	1.7	1.8	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
C1_1	PF00130.22	gi|284162012|ref|YP_003400635.1|	-	0.019	14.8	0.2	0.03	14.2	0.2	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF4428	PF14471.6	gi|284162012|ref|YP_003400635.1|	-	0.15	12.0	3.0	0.73	9.8	3.0	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
ADK_lid	PF05191.14	gi|284162012|ref|YP_003400635.1|	-	0.2	11.7	2.7	7.5	6.6	0.2	2.2	1	1	1	2	2	2	0	Adenylate	kinase,	active	site	lid
Phage_integrase	PF00589.22	gi|284162013|ref|YP_003400636.1|	-	1.8e-08	34.4	0.0	3.2e-08	33.5	0.0	1.5	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|284162013|ref|YP_003400636.1|	-	0.0013	19.1	0.5	0.012	16.1	0.1	2.7	2	1	1	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Put_DNA-bind_N	PF06971.13	gi|284162014|ref|YP_003400637.1|	-	0.11	12.5	0.1	0.85	9.7	0.0	2.1	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
DUF4428	PF14471.6	gi|284162015|ref|YP_003400638.1|	-	0.0015	18.4	0.5	0.017	15.1	0.6	2.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4428)
Ribosomal_S21	PF01165.20	gi|284162015|ref|YP_003400638.1|	-	0.12	12.1	0.7	0.2	11.4	0.7	1.5	1	1	0	1	1	1	0	Ribosomal	protein	S21
zf_UBZ	PF18439.1	gi|284162015|ref|YP_003400638.1|	-	0.46	10.1	5.9	21	4.8	0.6	3.2	2	1	1	3	3	3	0	Ubiquitin-Binding	Zinc	Finger
UBN_AB	PF14075.6	gi|284162016|ref|YP_003400639.1|	-	0.027	14.2	0.1	0.034	13.9	0.1	1.2	1	0	0	1	1	1	0	Ubinuclein	conserved	middle	domain
AbiJ_NTD4	PF18863.1	gi|284162016|ref|YP_003400639.1|	-	0.063	13.7	0.3	0.074	13.5	0.3	1.2	1	0	0	1	1	1	0	AbiJ	N-terminal	domain	4
TBP-binding	PF09247.11	gi|284162016|ref|YP_003400639.1|	-	0.15	12.3	0.2	0.78	10.0	0.0	2.0	2	0	0	2	2	2	0	TATA	box-binding	protein	binding
CRS1_YhbY	PF01985.21	gi|284162018|ref|YP_003400641.1|	-	0.16	12.2	0.2	0.24	11.6	0.2	1.2	1	0	0	1	1	1	0	CRS1	/	YhbY	(CRM)	domain
Hjc	PF01870.18	gi|284162019|ref|YP_003400642.1|	-	0.047	13.7	0.0	0.076	13.0	0.0	1.4	1	1	0	1	1	1	0	Archaeal	holliday	junction	resolvase	(hjc)
Abi_C	PF14355.6	gi|284162022|ref|YP_003400645.1|	-	0.059	13.5	0.0	0.079	13.1	0.0	1.3	1	0	0	1	1	1	0	Abortive	infection	C-terminus
DUF4404	PF14357.6	gi|284162022|ref|YP_003400645.1|	-	0.08	13.6	0.0	0.12	13.0	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
DUF5131	PF07505.11	gi|284162023|ref|YP_003400646.1|	-	1.6e-08	34.3	0.1	2.6e-08	33.6	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF5131)
PAZ_siRNAbind	PF12212.8	gi|284162023|ref|YP_003400646.1|	-	0.056	13.3	2.0	0.072	12.9	0.3	1.9	2	0	0	2	2	2	0	PAZ	domain
Radical_SAM	PF04055.21	gi|284162023|ref|YP_003400646.1|	-	2.3	8.6	5.4	8.6	6.7	5.4	2.0	1	1	0	1	1	1	0	Radical	SAM	superfamily
HxlR	PF01638.17	gi|284162025|ref|YP_003400648.1|	-	0.00013	21.7	0.9	0.00023	20.9	0.8	1.5	1	1	1	2	2	2	1	HxlR-like	helix-turn-helix
DUF505	PF04458.12	gi|284162025|ref|YP_003400648.1|	-	0.00095	17.7	0.9	0.0011	17.5	0.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
Cdc6_C	PF09079.11	gi|284162025|ref|YP_003400648.1|	-	0.0027	17.7	0.1	0.0062	16.5	0.1	1.7	1	1	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
HTH_45	PF14947.6	gi|284162025|ref|YP_003400648.1|	-	0.0035	17.3	1.5	0.0065	16.4	1.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
RTP	PF02334.16	gi|284162025|ref|YP_003400648.1|	-	0.0063	17.1	0.6	0.0086	16.7	0.6	1.2	1	0	0	1	1	1	1	Replication	terminator	protein
DUF4364	PF14277.6	gi|284162025|ref|YP_003400648.1|	-	0.0094	15.7	0.1	0.02	14.6	0.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF1495	PF07381.11	gi|284162025|ref|YP_003400648.1|	-	0.013	15.3	0.1	0.027	14.3	0.1	1.5	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
Replic_Relax	PF13814.6	gi|284162025|ref|YP_003400648.1|	-	0.019	15.1	0.1	0.022	14.8	0.1	1.1	1	0	0	1	1	1	0	Replication-relaxation
HTH_27	PF13463.6	gi|284162025|ref|YP_003400648.1|	-	0.054	14.0	0.2	0.14	12.7	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|284162025|ref|YP_003400648.1|	-	0.055	13.4	0.3	0.33	10.8	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
AbiH	PF14253.6	gi|284162025|ref|YP_003400648.1|	-	0.075	12.9	0.6	0.096	12.5	0.6	1.1	1	0	0	1	1	1	0	Bacteriophage	abortive	infection	AbiH
DUF3046	PF11248.8	gi|284162026|ref|YP_003400649.1|	-	0.016	15.6	0.1	0.022	15.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3046)
DUF4777	PF16007.5	gi|284162026|ref|YP_003400649.1|	-	0.02	15.2	0.3	0.054	13.8	0.2	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4777)
HTH_31	PF13560.6	gi|284162026|ref|YP_003400649.1|	-	0.072	13.4	0.1	0.17	12.2	0.1	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
DUF4223	PF13978.6	gi|284162027|ref|YP_003400650.1|	-	0.077	13.0	0.1	0.15	12.0	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4223)
LPAM_1	PF08139.12	gi|284162027|ref|YP_003400650.1|	-	3.6	8.3	7.5	0.22	12.1	1.9	2.0	2	0	0	2	2	2	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
CAP	PF00188.26	gi|284162028|ref|YP_003400651.1|	-	3.7e-09	37.5	0.0	4.6e-09	37.2	0.0	1.1	1	0	0	1	1	1	1	Cysteine-rich	secretory	protein	family
CcdA	PF07362.12	gi|284162029|ref|YP_003400652.1|	-	1.2e-08	35.2	1.3	2.5e-08	34.2	1.3	1.5	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.21	gi|284162029|ref|YP_003400652.1|	-	0.011	15.6	0.7	0.084	12.8	0.7	2.1	1	1	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.7	gi|284162029|ref|YP_003400652.1|	-	0.029	14.3	1.8	0.35	10.9	1.8	2.3	1	1	0	1	1	1	0	Ribbon-helix-helix	domain
CCG	PF02754.16	gi|284162030|ref|YP_003400653.1|	-	2.9e-25	88.3	3.7	1.1e-15	57.6	0.0	3.2	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_17	PF13534.6	gi|284162030|ref|YP_003400653.1|	-	1.5e-10	41.4	7.1	2.4e-10	40.8	5.2	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284162030|ref|YP_003400653.1|	-	4e-08	33.3	4.7	1e-07	32.0	4.7	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284162030|ref|YP_003400653.1|	-	1.2e-07	32.1	3.7	2.9e-07	30.8	3.7	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162030|ref|YP_003400653.1|	-	0.00016	22.2	6.7	0.00016	22.2	6.7	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162030|ref|YP_003400653.1|	-	0.00035	20.2	12.6	0.021	14.6	2.2	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162030|ref|YP_003400653.1|	-	0.00044	20.3	9.7	0.0051	16.9	10.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|284162030|ref|YP_003400653.1|	-	0.0019	18.4	3.0	0.39	10.9	0.2	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162030|ref|YP_003400653.1|	-	0.059	14.3	10.6	1.7	9.7	10.9	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|284162030|ref|YP_003400653.1|	-	0.17	12.1	15.7	0.056	13.6	10.2	2.7	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162030|ref|YP_003400653.1|	-	0.48	11.5	15.9	1.9	9.6	2.7	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|284162030|ref|YP_003400653.1|	-	1.4	9.8	7.8	13	6.7	0.7	3.3	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162030|ref|YP_003400653.1|	-	4.7	7.5	18.5	0.99	9.6	2.5	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
ETF	PF01012.21	gi|284162031|ref|YP_003400654.1|	-	2.1e-13	50.6	0.0	3e-13	50.1	0.0	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Radical_SAM	PF04055.21	gi|284162031|ref|YP_003400654.1|	-	0.072	13.5	0.3	0.14	12.5	0.0	1.5	2	0	0	2	2	2	0	Radical	SAM	superfamily
ETF_alpha	PF00766.19	gi|284162032|ref|YP_003400655.1|	-	3e-26	91.3	0.6	6.5e-26	90.2	0.6	1.6	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.21	gi|284162032|ref|YP_003400655.1|	-	2.8e-17	63.2	1.1	1.2e-13	51.4	0.0	2.9	2	1	0	3	3	3	2	Electron	transfer	flavoprotein	domain
tRNA_edit	PF04073.15	gi|284162033|ref|YP_003400656.1|	-	6.1e-30	103.8	0.1	7.4e-30	103.6	0.1	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
SpoIIID	PF12116.8	gi|284162033|ref|YP_003400656.1|	-	0.024	14.7	0.4	0.05	13.7	0.4	1.5	1	0	0	1	1	1	0	Stage	III	sporulation	protein	D
HTH_23	PF13384.6	gi|284162033|ref|YP_003400656.1|	-	0.025	14.4	0.1	0.055	13.3	0.0	1.6	1	1	0	1	1	1	0	Homeodomain-like	domain
HTH_29	PF13551.6	gi|284162033|ref|YP_003400656.1|	-	0.04	13.9	0.0	0.065	13.3	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
3HCDH_N	PF02737.18	gi|284162033|ref|YP_003400656.1|	-	0.049	13.5	0.8	0.066	13.1	0.8	1.1	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HTH_28	PF13518.6	gi|284162033|ref|YP_003400656.1|	-	0.051	13.7	0.0	0.11	12.7	0.0	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_17	PF12728.7	gi|284162033|ref|YP_003400656.1|	-	0.059	13.6	0.3	0.22	11.7	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_ECF	PF07638.11	gi|284162033|ref|YP_003400656.1|	-	0.074	12.9	0.2	0.1	12.5	0.2	1.3	1	0	0	1	1	1	0	ECF	sigma	factor
Peptidase_S51	PF03575.17	gi|284162033|ref|YP_003400656.1|	-	0.14	11.8	0.0	0.91	9.1	0.0	2.0	2	0	0	2	2	2	0	Peptidase	family	S51
HTH_Mga	PF08280.11	gi|284162033|ref|YP_003400656.1|	-	0.15	12.1	0.0	0.23	11.5	0.0	1.4	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
AP_endonuc_2	PF01261.24	gi|284162034|ref|YP_003400657.1|	-	3.6e-25	88.7	0.0	4.3e-25	88.4	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.14	gi|284162034|ref|YP_003400657.1|	-	0.0033	16.7	0.0	0.0064	15.8	0.0	1.4	1	1	0	1	1	1	1	UV-endonuclease	UvdE
ADP_ribosyl_GH	PF03747.14	gi|284162035|ref|YP_003400658.1|	-	5.9e-61	206.8	0.0	6.7e-61	206.6	0.0	1.0	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
EPSP_synthase	PF00275.20	gi|284162036|ref|YP_003400659.1|	-	3.2e-96	322.6	0.0	4e-96	322.2	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
Topoisom_bac	PF01131.20	gi|284162037|ref|YP_003400660.1|	-	5.9e-65	219.9	0.3	3.9e-38	131.5	0.0	3.6	2	1	1	3	3	3	3	DNA	topoisomerase
Intein_splicing	PF14890.6	gi|284162037|ref|YP_003400660.1|	-	8e-32	110.0	1.1	2e-31	108.7	1.1	1.7	1	0	0	1	1	1	1	Intein	splicing	domain
Toprim	PF01751.22	gi|284162037|ref|YP_003400660.1|	-	1.9e-24	85.8	0.0	8.9e-24	83.7	0.0	2.3	1	0	0	1	1	1	1	Toprim	domain
LAGLIDADG_3	PF14528.6	gi|284162037|ref|YP_003400660.1|	-	4.9e-20	71.6	0.2	5.3e-17	61.9	0.1	3.7	2	0	0	2	2	2	1	LAGLIDADG-like	domain
DEAD	PF00270.29	gi|284162037|ref|YP_003400660.1|	-	2.3e-14	53.6	0.0	5.4e-14	52.4	0.0	1.7	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|284162037|ref|YP_003400660.1|	-	3e-07	30.8	0.3	0.11	12.8	0.0	4.2	3	1	0	3	3	3	2	Helicase	conserved	C-terminal	domain
LAGLIDADG_1	PF00961.19	gi|284162037|ref|YP_003400660.1|	-	4.3e-07	30.8	2.3	5.2e-06	27.4	0.7	3.4	2	0	0	2	2	2	1	LAGLIDADG	endonuclease
ResIII	PF04851.15	gi|284162037|ref|YP_003400660.1|	-	7.4e-06	26.1	0.0	2e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Hint	PF01079.20	gi|284162037|ref|YP_003400660.1|	-	8.5e-05	22.2	0.0	0.00023	20.8	0.0	1.7	1	0	0	1	1	1	1	Hint	module
SecA_DEAD	PF07517.14	gi|284162037|ref|YP_003400660.1|	-	0.0039	16.5	0.4	0.023	14.0	0.0	2.5	3	0	0	3	3	3	1	SecA	DEAD-like	domain
AAA_25	PF13481.6	gi|284162037|ref|YP_003400660.1|	-	0.016	14.8	0.0	0.044	13.4	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NRDD	PF13597.6	gi|284162037|ref|YP_003400660.1|	-	0.016	14.0	1.5	0.032	13.0	1.5	1.4	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.19	gi|284162037|ref|YP_003400660.1|	-	0.027	14.5	6.8	0.025	14.6	0.9	3.1	3	0	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TackOD1	PF18551.1	gi|284162037|ref|YP_003400660.1|	-	0.029	14.1	0.0	0.081	12.6	0.0	1.7	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
IstB_IS21	PF01695.17	gi|284162037|ref|YP_003400660.1|	-	0.085	12.6	0.0	1.1	8.9	0.0	2.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF35_N	PF12172.8	gi|284162037|ref|YP_003400660.1|	-	0.089	12.7	1.5	0.26	11.2	1.5	1.8	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Toprim_4	PF13662.6	gi|284162037|ref|YP_003400660.1|	-	0.12	12.9	0.0	1.6	9.3	0.0	2.6	2	0	0	2	2	2	0	Toprim	domain
zf_Rg	PF17915.1	gi|284162037|ref|YP_003400660.1|	-	0.31	10.5	2.0	0.28	10.6	0.1	1.9	2	0	0	2	2	2	0	Reverse	gyrase	zinc	finger
Zn-ribbon_8	PF09723.10	gi|284162037|ref|YP_003400660.1|	-	0.92	9.7	7.4	0.59	10.3	1.6	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|284162037|ref|YP_003400660.1|	-	1.4	8.8	4.2	1.1	9.1	0.5	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.7	gi|284162037|ref|YP_003400660.1|	-	2.3	8.3	5.4	0.85	9.7	0.3	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
NikR_C	PF08753.11	gi|284162038|ref|YP_003400661.1|	-	1.1e-27	96.0	4.8	1.6e-27	95.5	4.8	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.21	gi|284162038|ref|YP_003400661.1|	-	2.9e-11	42.9	0.1	6.1e-11	41.9	0.1	1.6	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
HicB_lk_antitox	PF15919.5	gi|284162038|ref|YP_003400661.1|	-	0.0011	19.0	0.2	0.0031	17.6	0.0	1.8	2	1	0	2	2	2	1	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
Acyl-CoA_dh_1	PF00441.24	gi|284162039|ref|YP_003400662.1|	-	5.4e-27	94.8	0.0	8.2e-27	94.3	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|284162039|ref|YP_003400662.1|	-	1.3e-12	47.7	0.0	2.4e-12	46.9	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|284162039|ref|YP_003400662.1|	-	0.11	12.7	0.0	14	6.0	0.0	2.3	2	0	0	2	2	2	0	Acyl-CoA	dehydrogenase,	C-terminal	domain
AsnC_trans_reg	PF01037.21	gi|284162040|ref|YP_003400663.1|	-	1.2e-14	54.1	1.1	2.2e-14	53.1	0.2	1.9	2	0	0	2	2	2	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|284162040|ref|YP_003400663.1|	-	1e-13	50.6	1.7	2.1e-13	49.6	1.7	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|284162040|ref|YP_003400663.1|	-	2.8e-13	49.4	0.3	4.3e-13	48.9	0.3	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.12	gi|284162040|ref|YP_003400663.1|	-	2e-07	30.8	0.2	5.3e-07	29.5	0.1	1.7	2	0	0	2	2	1	1	HTH	domain
TrmB	PF01978.19	gi|284162040|ref|YP_003400663.1|	-	1e-05	25.3	0.5	2.5e-05	24.1	0.1	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HrcA_DNA-bdg	PF03444.15	gi|284162040|ref|YP_003400663.1|	-	4.1e-05	23.1	0.5	8.2e-05	22.2	0.5	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_20	PF12840.7	gi|284162040|ref|YP_003400663.1|	-	4.3e-05	23.5	0.0	7.3e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.6	gi|284162040|ref|YP_003400663.1|	-	6.7e-05	23.3	0.5	0.00026	21.4	0.1	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_23	PF13384.6	gi|284162040|ref|YP_003400663.1|	-	0.00026	20.7	0.0	0.00047	19.9	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
Sigma70_r4_2	PF08281.12	gi|284162040|ref|YP_003400663.1|	-	0.00028	20.5	0.0	0.00045	19.8	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_5	PF01022.20	gi|284162040|ref|YP_003400663.1|	-	0.00031	20.5	0.0	0.00057	19.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.12	gi|284162040|ref|YP_003400663.1|	-	0.00052	19.7	1.5	0.0011	18.6	0.2	2.2	3	0	0	3	3	2	1	DeoR-like	helix-turn-helix	domain
AsnC_trans_reg2	PF17805.1	gi|284162040|ref|YP_003400663.1|	-	0.00055	20.0	0.4	0.0022	18.1	0.0	2.0	2	0	0	2	2	2	1	AsnC-like	ligand	binding	domain
Fe_dep_repress	PF01325.19	gi|284162040|ref|YP_003400663.1|	-	0.0018	18.4	0.1	0.0068	16.6	0.0	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
P2	PF07194.11	gi|284162040|ref|YP_003400663.1|	-	0.0027	17.7	2.0	0.29	11.2	0.1	2.9	1	1	2	3	3	3	1	P2	response	regulator	binding	domain
MarR	PF01047.22	gi|284162040|ref|YP_003400663.1|	-	0.0028	17.5	0.1	0.006	16.5	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_28	PF13518.6	gi|284162040|ref|YP_003400663.1|	-	0.0029	17.7	0.0	0.0046	17.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_40	PF14493.6	gi|284162040|ref|YP_003400663.1|	-	0.003	18.0	0.3	0.01	16.3	0.1	2.0	1	1	1	2	2	2	1	Helix-turn-helix	domain
UPF0122	PF04297.14	gi|284162040|ref|YP_003400663.1|	-	0.0047	17.1	0.3	0.019	15.2	0.0	2.0	2	0	0	2	2	2	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_IclR	PF09339.10	gi|284162040|ref|YP_003400663.1|	-	0.0047	16.7	0.0	0.0076	16.0	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_22	PF13309.6	gi|284162040|ref|YP_003400663.1|	-	0.0077	16.3	0.0	0.018	15.1	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
GerE	PF00196.19	gi|284162040|ref|YP_003400663.1|	-	0.0081	15.7	0.1	0.017	14.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_38	PF13936.6	gi|284162040|ref|YP_003400663.1|	-	0.011	15.5	0.1	0.022	14.5	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|284162040|ref|YP_003400663.1|	-	0.014	14.9	0.0	0.023	14.2	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
MarR_2	PF12802.7	gi|284162040|ref|YP_003400663.1|	-	0.017	15.0	0.0	0.034	14.0	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_10	PF04967.12	gi|284162040|ref|YP_003400663.1|	-	0.017	14.9	0.1	0.05	13.4	0.1	1.8	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Rrf2	PF02082.20	gi|284162040|ref|YP_003400663.1|	-	0.02	15.3	1.2	0.088	13.2	0.1	2.3	3	0	0	3	3	2	0	Transcriptional	regulator
PadR	PF03551.14	gi|284162040|ref|YP_003400663.1|	-	0.031	14.2	0.2	0.15	12.1	0.0	2.2	3	0	0	3	3	3	0	Transcriptional	regulator	PadR-like	family
HTH_30	PF13556.6	gi|284162040|ref|YP_003400663.1|	-	0.041	13.7	0.0	0.081	12.7	0.0	1.4	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|284162040|ref|YP_003400663.1|	-	0.044	13.2	0.0	0.078	12.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Mga	PF05043.13	gi|284162040|ref|YP_003400663.1|	-	0.045	14.3	0.2	0.12	13.0	0.0	1.7	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
BMFP	PF04380.13	gi|284162040|ref|YP_003400663.1|	-	0.054	14.0	0.2	2.3	8.8	0.0	2.3	2	0	0	2	2	2	0	Membrane	fusogenic	activity
TetR_N	PF00440.23	gi|284162040|ref|YP_003400663.1|	-	0.076	12.8	0.0	0.18	11.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
HTH_Crp_2	PF13545.6	gi|284162040|ref|YP_003400663.1|	-	0.1	12.6	0.0	0.23	11.5	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.6	gi|284162040|ref|YP_003400663.1|	-	0.12	12.1	0.2	0.32	10.7	0.0	1.7	2	0	0	2	2	1	0	Helix-turn-helix	domain
ATP_bind_1	PF03029.17	gi|284162041|ref|YP_003400664.1|	-	4.8e-50	170.6	0.1	5.5e-50	170.4	0.1	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
GTP_EFTU	PF00009.27	gi|284162041|ref|YP_003400664.1|	-	4.2e-08	33.0	0.0	5.2e-07	29.4	0.0	2.1	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
NTPase_1	PF03266.15	gi|284162041|ref|YP_003400664.1|	-	2e-05	24.6	0.2	0.002	18.1	0.0	2.3	2	0	0	2	2	2	1	NTPase
MMR_HSR1	PF01926.23	gi|284162041|ref|YP_003400664.1|	-	9.8e-05	22.4	0.0	0.00041	20.4	0.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_18	PF13238.6	gi|284162041|ref|YP_003400664.1|	-	0.00022	21.8	0.0	0.00033	21.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|284162041|ref|YP_003400664.1|	-	0.00029	20.6	0.0	0.00036	20.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
cobW	PF02492.19	gi|284162041|ref|YP_003400664.1|	-	0.00042	19.9	0.1	0.0014	18.3	0.1	1.7	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.6	gi|284162041|ref|YP_003400664.1|	-	0.00046	20.5	0.0	0.0011	19.2	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
MeaB	PF03308.16	gi|284162041|ref|YP_003400664.1|	-	0.00079	18.5	0.0	0.033	13.2	0.0	2.1	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_33	PF13671.6	gi|284162041|ref|YP_003400664.1|	-	0.0011	19.1	0.0	0.0014	18.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.7	gi|284162041|ref|YP_003400664.1|	-	0.0013	17.7	0.0	0.0016	17.4	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
Dynamin_N	PF00350.23	gi|284162041|ref|YP_003400664.1|	-	0.0015	18.6	0.3	0.91	9.6	0.3	2.2	1	1	1	2	2	2	1	Dynamin	family
ATPase_2	PF01637.18	gi|284162041|ref|YP_003400664.1|	-	0.0021	18.0	0.0	0.0032	17.4	0.0	1.3	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_5	PF07728.14	gi|284162041|ref|YP_003400664.1|	-	0.0021	18.0	0.0	0.015	15.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|284162041|ref|YP_003400664.1|	-	0.0023	17.7	0.0	0.0035	17.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|284162041|ref|YP_003400664.1|	-	0.0025	17.5	0.0	0.01	15.4	0.0	1.8	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_14	PF13173.6	gi|284162041|ref|YP_003400664.1|	-	0.0025	17.8	0.0	0.0038	17.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
FeoB_N	PF02421.18	gi|284162041|ref|YP_003400664.1|	-	0.0027	17.2	0.4	0.087	12.4	0.0	2.7	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
AAA_16	PF13191.6	gi|284162041|ref|YP_003400664.1|	-	0.0027	18.1	0.0	0.0029	18.0	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
T2SSE	PF00437.20	gi|284162041|ref|YP_003400664.1|	-	0.0053	15.8	0.0	0.0079	15.3	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_7	PF12775.7	gi|284162041|ref|YP_003400664.1|	-	0.0079	15.7	0.0	0.012	15.1	0.0	1.2	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
G-alpha	PF00503.20	gi|284162041|ref|YP_003400664.1|	-	0.008	15.4	0.0	0.035	13.3	0.0	1.8	1	1	0	2	2	2	1	G-protein	alpha	subunit
NACHT	PF05729.12	gi|284162041|ref|YP_003400664.1|	-	0.0093	15.9	0.0	0.016	15.2	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
ABC_tran	PF00005.27	gi|284162041|ref|YP_003400664.1|	-	0.013	16.0	0.0	0.021	15.4	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
Ras	PF00071.22	gi|284162041|ref|YP_003400664.1|	-	0.014	15.0	0.0	2.6	7.6	0.0	2.3	2	0	0	2	2	2	0	Ras	family
KTI12	PF08433.10	gi|284162041|ref|YP_003400664.1|	-	0.014	14.9	0.0	0.02	14.3	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
DUF87	PF01935.17	gi|284162041|ref|YP_003400664.1|	-	0.014	15.5	0.0	0.02	15.0	0.0	1.3	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
KAP_NTPase	PF07693.14	gi|284162041|ref|YP_003400664.1|	-	0.022	14.0	0.0	0.022	14.0	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
Spore_IV_A	PF09547.10	gi|284162041|ref|YP_003400664.1|	-	0.023	13.7	0.1	0.035	13.0	0.1	1.3	1	0	0	1	1	1	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
CLP1_P	PF16575.5	gi|284162041|ref|YP_003400664.1|	-	0.024	14.4	0.0	0.047	13.5	0.0	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
RNA_helicase	PF00910.22	gi|284162041|ref|YP_003400664.1|	-	0.028	14.8	0.0	0.052	13.9	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
PRK	PF00485.18	gi|284162041|ref|YP_003400664.1|	-	0.028	14.2	0.0	0.05	13.3	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_31	PF13614.6	gi|284162041|ref|YP_003400664.1|	-	0.037	13.9	0.0	2.8	7.8	0.0	2.4	1	1	1	2	2	2	0	AAA	domain
CbiA	PF01656.23	gi|284162041|ref|YP_003400664.1|	-	0.049	13.7	0.0	0.075	13.1	0.0	1.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_28	PF13521.6	gi|284162041|ref|YP_003400664.1|	-	0.051	13.8	0.0	0.068	13.4	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
DUF815	PF05673.13	gi|284162041|ref|YP_003400664.1|	-	0.054	12.7	0.0	0.11	11.6	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF815)
AAA_29	PF13555.6	gi|284162041|ref|YP_003400664.1|	-	0.06	13.1	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PTS_IIB	PF02302.17	gi|284162041|ref|YP_003400664.1|	-	0.08	13.6	0.0	0.24	12.1	0.0	1.8	2	0	0	2	2	1	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
Roc	PF08477.13	gi|284162041|ref|YP_003400664.1|	-	0.081	13.1	0.1	0.65	10.2	0.0	2.2	1	1	1	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
dNK	PF01712.19	gi|284162041|ref|YP_003400664.1|	-	0.083	12.7	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Deoxynucleoside	kinase
AAA_17	PF13207.6	gi|284162041|ref|YP_003400664.1|	-	0.087	13.3	0.0	0.14	12.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_PrkA	PF08298.11	gi|284162041|ref|YP_003400664.1|	-	0.087	11.7	0.0	0.14	11.1	0.0	1.3	1	0	0	1	1	1	0	PrkA	AAA	domain
AAA	PF00004.29	gi|284162041|ref|YP_003400664.1|	-	0.09	13.2	0.0	0.27	11.7	0.0	1.9	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RsgA_GTPase	PF03193.16	gi|284162041|ref|YP_003400664.1|	-	0.093	12.6	0.4	1.1	9.2	0.1	2.7	2	1	0	2	2	2	0	RsgA	GTPase
PduV-EutP	PF10662.9	gi|284162041|ref|YP_003400664.1|	-	0.098	12.4	0.2	12	5.6	0.0	3.0	3	1	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
FtsK_SpoIIIE	PF01580.18	gi|284162041|ref|YP_003400664.1|	-	0.11	11.9	0.1	0.17	11.2	0.1	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Septin	PF00735.18	gi|284162041|ref|YP_003400664.1|	-	0.14	11.4	0.0	0.19	11.0	0.0	1.3	1	0	0	1	1	1	0	Septin
Viral_helicase1	PF01443.18	gi|284162041|ref|YP_003400664.1|	-	0.19	11.4	0.0	0.29	10.9	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Orn_Arg_deC_N	PF02784.16	gi|284162042|ref|YP_003400665.1|	-	1.1e-60	205.0	0.0	3.4e-60	203.5	0.0	1.7	1	1	1	2	2	2	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|284162042|ref|YP_003400665.1|	-	6e-27	93.8	0.0	6.5e-27	93.6	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Ala_racemase_N	PF01168.20	gi|284162042|ref|YP_003400665.1|	-	7.8e-10	38.8	0.0	1.5e-09	37.9	0.0	1.4	1	1	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
YqaH	PF17448.2	gi|284162043|ref|YP_003400666.1|	-	0.14	12.5	0.2	0.31	11.4	0.0	1.6	2	0	0	2	2	2	0	Uncharacterized	YqaH-like
GATase	PF00117.28	gi|284162044|ref|YP_003400667.1|	-	9.1e-42	143.0	0.0	1e-41	142.8	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|284162044|ref|YP_003400667.1|	-	2e-14	53.9	2.8	3.4e-13	49.9	0.6	2.8	1	1	1	2	2	2	1	Peptidase	C26
SNO	PF01174.19	gi|284162044|ref|YP_003400667.1|	-	0.005	16.7	0.2	0.1	12.4	0.2	2.2	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Tup_N	PF08581.10	gi|284162044|ref|YP_003400667.1|	-	0.0073	16.6	0.0	0.014	15.7	0.0	1.3	1	0	0	1	1	1	1	Tup	N-terminal
PQQ_2	PF13360.6	gi|284162045|ref|YP_003400668.1|	-	0.0002	21.0	0.0	0.00081	19.0	0.0	1.8	1	1	1	2	2	2	2	PQQ-like	domain
PQQ	PF01011.21	gi|284162045|ref|YP_003400668.1|	-	0.0022	17.8	0.1	13	6.0	0.0	3.8	3	1	0	3	3	3	1	PQQ	enzyme	repeat
Glyco_trans_4_5	PF16994.5	gi|284162045|ref|YP_003400668.1|	-	0.0063	16.1	0.0	0.014	15.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl-transferase	family	4
HEPN_AbiV	PF18728.1	gi|284162045|ref|YP_003400668.1|	-	0.016	15.3	0.0	0.03	14.5	0.0	1.3	1	0	0	1	1	1	0	AbiV
Thioredoxin_10	PF17991.1	gi|284162045|ref|YP_003400668.1|	-	0.17	12.4	0.0	9	6.8	0.0	2.3	2	0	0	2	2	2	0	Thioredoxin	like	C-terminal	domain
UbiA	PF01040.18	gi|284162046|ref|YP_003400669.1|	-	1.2e-52	178.7	23.0	1.6e-52	178.3	23.0	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2070	PF09843.9	gi|284162046|ref|YP_003400669.1|	-	1.7	6.9	24.1	0.26	9.5	8.2	2.0	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2070)
Asp4	PF16996.5	gi|284162046|ref|YP_003400669.1|	-	7.4	6.4	7.1	20	5.1	7.1	1.7	1	0	0	1	1	1	0	Accessory	secretory	protein	Sec	Asp4
BBP1_C	PF15272.6	gi|284162047|ref|YP_003400670.1|	-	0.039	13.8	3.5	0.081	12.7	3.5	1.5	1	0	0	1	1	1	0	Spindle	pole	body	component	BBP1,	C-terminal
CGGC	PF08821.11	gi|284162048|ref|YP_003400671.1|	-	6.3e-21	74.6	2.2	7.1e-21	74.4	2.2	1.0	1	0	0	1	1	1	1	CGGC	domain
Fer4_10	PF13237.6	gi|284162048|ref|YP_003400671.1|	-	0.078	13.1	5.7	1.5	9.0	4.8	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_S2	PF00318.20	gi|284162049|ref|YP_003400672.1|	-	8.3e-30	103.6	0.1	1.1e-16	60.8	0.3	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Peripla_BP_4	PF13407.6	gi|284162049|ref|YP_003400672.1|	-	0.046	13.3	0.2	0.067	12.8	0.2	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
BRCT_3	PF18428.1	gi|284162049|ref|YP_003400672.1|	-	0.14	12.3	0.0	0.23	11.5	0.0	1.3	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
DUF555	PF04475.12	gi|284162050|ref|YP_003400673.1|	-	1.9e-48	163.0	0.1	2.2e-48	162.8	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF555)
Jag_N	PF14804.6	gi|284162050|ref|YP_003400673.1|	-	0.019	15.3	0.1	1.9	8.9	0.0	2.3	2	0	0	2	2	2	0	Jag	N-terminus
zinc_ribbon_2	PF13240.6	gi|284162050|ref|YP_003400673.1|	-	0.032	14.0	0.1	0.047	13.4	0.1	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|284162050|ref|YP_003400673.1|	-	0.067	12.6	0.2	0.1	12.0	0.2	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf_C2H2_10	PF18414.1	gi|284162050|ref|YP_003400673.1|	-	0.97	9.0	2.7	1.9	8.1	0.6	2.1	2	0	0	2	2	2	0	C2H2	type	zinc-finger
MMR_HSR1	PF01926.23	gi|284162051|ref|YP_003400674.1|	-	3.9e-17	62.4	0.0	1.7e-14	53.9	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|284162051|ref|YP_003400674.1|	-	1.6e-10	40.7	0.0	3.1e-05	23.5	0.0	2.1	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|284162051|ref|YP_003400674.1|	-	2.7e-08	33.9	0.0	5.5e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
cobW	PF02492.19	gi|284162051|ref|YP_003400674.1|	-	0.00014	21.5	0.1	0.026	14.1	0.0	2.9	2	1	1	3	3	3	1	CobW/HypB/UreG,	nucleotide-binding	domain
GTP_EFTU	PF00009.27	gi|284162051|ref|YP_003400674.1|	-	0.00029	20.4	0.0	0.0051	16.4	0.0	2.2	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Arf	PF00025.21	gi|284162051|ref|YP_003400674.1|	-	0.0022	17.5	0.1	0.018	14.5	0.0	2.1	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
PPV_E1_C	PF00519.17	gi|284162051|ref|YP_003400674.1|	-	0.0084	15.0	0.0	0.011	14.6	0.0	1.1	1	0	0	1	1	1	1	Papillomavirus	helicase
Dynamin_N	PF00350.23	gi|284162051|ref|YP_003400674.1|	-	0.019	15.0	0.0	1.6	8.8	0.0	2.9	3	0	0	3	3	3	0	Dynamin	family
AAA_16	PF13191.6	gi|284162051|ref|YP_003400674.1|	-	0.02	15.3	0.0	0.036	14.5	0.0	1.5	2	0	0	2	2	2	0	AAA	ATPase	domain
Roc	PF08477.13	gi|284162051|ref|YP_003400674.1|	-	0.02	15.1	0.0	0.05	13.8	0.0	1.7	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
6PF2K	PF01591.18	gi|284162051|ref|YP_003400674.1|	-	0.072	12.4	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AIG1	PF04548.16	gi|284162051|ref|YP_003400674.1|	-	0.1	11.9	0.0	0.19	11.0	0.0	1.6	1	1	0	1	1	1	0	AIG1	family
AAA	PF00004.29	gi|284162051|ref|YP_003400674.1|	-	0.12	12.8	0.0	0.31	11.4	0.0	1.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Ras	PF00071.22	gi|284162051|ref|YP_003400674.1|	-	0.13	11.9	0.1	0.3	10.7	0.0	1.6	2	0	0	2	2	2	0	Ras	family
RusA	PF05866.11	gi|284162053|ref|YP_003400676.1|	-	0.14	12.7	0.0	0.23	12.0	0.0	1.4	1	0	0	1	1	1	0	Endodeoxyribonuclease	RusA
Seryl_tRNA_N	PF02403.22	gi|284162055|ref|YP_003400678.1|	-	4.4e-05	23.7	7.6	5.9e-05	23.2	7.6	1.2	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF5098	PF17023.5	gi|284162055|ref|YP_003400678.1|	-	0.00018	20.6	6.2	0.00019	20.6	6.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5098)
DASH_Dad2	PF08654.10	gi|284162055|ref|YP_003400678.1|	-	0.00044	20.6	1.2	0.00062	20.1	1.0	1.4	1	1	0	1	1	1	1	DASH	complex	subunit	Dad2
PI3K_P85_iSH2	PF16454.5	gi|284162055|ref|YP_003400678.1|	-	0.00056	19.5	0.8	0.00063	19.4	0.8	1.2	1	0	0	1	1	1	1	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
FlaC_arch	PF05377.11	gi|284162055|ref|YP_003400678.1|	-	0.00085	19.7	4.9	0.00085	19.7	4.9	2.3	2	1	1	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
Snapin_Pallidin	PF14712.6	gi|284162055|ref|YP_003400678.1|	-	0.0021	18.5	4.7	0.0024	18.3	3.7	1.6	1	1	0	1	1	1	1	Snapin/Pallidin
PEARLI-4	PF05278.12	gi|284162055|ref|YP_003400678.1|	-	0.0027	17.4	2.9	0.0037	16.9	2.9	1.3	1	0	0	1	1	1	1	Arabidopsis	phospholipase-like	protein	(PEARLI	4)
Laminin_II	PF06009.12	gi|284162055|ref|YP_003400678.1|	-	0.0028	17.7	4.8	0.0084	16.1	4.8	1.7	1	1	0	1	1	1	1	Laminin	Domain	II
NPV_P10	PF05531.12	gi|284162055|ref|YP_003400678.1|	-	0.003	18.0	5.1	0.063	13.7	5.1	2.1	1	1	0	1	1	1	1	Nucleopolyhedrovirus	P10	protein
LPP	PF04728.13	gi|284162055|ref|YP_003400678.1|	-	0.0031	17.9	1.1	0.04	14.3	0.7	2.3	1	1	1	2	2	2	1	Lipoprotein	leucine-zipper
Laminin_I	PF06008.14	gi|284162055|ref|YP_003400678.1|	-	0.0041	16.9	3.0	0.0046	16.7	3.0	1.0	1	0	0	1	1	1	1	Laminin	Domain	I
DUF1664	PF07889.12	gi|284162055|ref|YP_003400678.1|	-	0.0045	17.0	5.8	0.0083	16.2	5.8	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1664)
Sec34	PF04136.15	gi|284162055|ref|YP_003400678.1|	-	0.0051	16.7	1.2	0.0072	16.2	1.2	1.3	1	0	0	1	1	1	1	Sec34-like	family
IFT57	PF10498.9	gi|284162055|ref|YP_003400678.1|	-	0.0068	15.4	2.8	0.0072	15.3	2.8	1.1	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
XhlA	PF10779.9	gi|284162055|ref|YP_003400678.1|	-	0.01	16.1	12.5	0.057	13.6	7.5	2.4	1	1	1	2	2	2	2	Haemolysin	XhlA
DHR10	PF18595.1	gi|284162055|ref|YP_003400678.1|	-	0.011	15.7	3.4	0.011	15.7	3.4	1.8	1	1	0	1	1	1	0	Designed	helical	repeat	protein	10	domain
COG5	PF10392.9	gi|284162055|ref|YP_003400678.1|	-	0.012	15.8	1.9	0.034	14.3	1.9	1.8	1	1	0	1	1	1	0	Golgi	transport	complex	subunit	5
TEX12	PF15219.6	gi|284162055|ref|YP_003400678.1|	-	0.012	15.9	1.4	0.019	15.3	1.2	1.5	1	1	0	1	1	1	0	Testis-expressed	12
Atg14	PF10186.9	gi|284162055|ref|YP_003400678.1|	-	0.013	14.6	4.1	0.014	14.5	4.1	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DivIC	PF04977.15	gi|284162055|ref|YP_003400678.1|	-	0.017	14.9	5.5	0.023	14.4	3.1	2.1	2	1	0	2	2	2	0	Septum	formation	initiator
PspB	PF06667.12	gi|284162055|ref|YP_003400678.1|	-	0.018	15.1	1.9	0.022	14.8	0.5	1.8	2	0	0	2	2	2	0	Phage	shock	protein	B
DUF1515	PF07439.11	gi|284162055|ref|YP_003400678.1|	-	0.018	15.0	2.5	0.027	14.5	1.8	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1515)
DUF724	PF05266.14	gi|284162055|ref|YP_003400678.1|	-	0.02	14.8	6.8	0.021	14.7	6.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
DUF948	PF06103.11	gi|284162055|ref|YP_003400678.1|	-	0.023	15.0	2.7	0.045	14.0	2.7	1.7	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
CENP-H	PF05837.12	gi|284162055|ref|YP_003400678.1|	-	0.026	14.9	4.0	0.046	14.1	4.0	1.4	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
HSBP1	PF06825.12	gi|284162055|ref|YP_003400678.1|	-	0.028	14.3	0.8	0.1	12.5	0.8	2.0	1	1	1	2	2	2	0	Heat	shock	factor	binding	protein	1
ZapB	PF06005.12	gi|284162055|ref|YP_003400678.1|	-	0.03	14.8	6.3	0.052	14.0	6.2	1.5	1	1	0	1	1	1	0	Cell	division	protein	ZapB
Spc7	PF08317.11	gi|284162055|ref|YP_003400678.1|	-	0.03	13.2	6.3	0.036	13.0	6.3	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF4140	PF13600.6	gi|284162055|ref|YP_003400678.1|	-	0.03	14.7	0.4	0.03	14.7	0.4	1.7	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
GIT_CC	PF16559.5	gi|284162055|ref|YP_003400678.1|	-	0.033	14.1	3.9	0.13	12.2	0.5	2.1	2	0	0	2	2	2	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
bZIP_2	PF07716.15	gi|284162055|ref|YP_003400678.1|	-	0.033	14.3	4.1	0.16	12.0	1.3	2.2	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Prefoldin_2	PF01920.20	gi|284162055|ref|YP_003400678.1|	-	0.036	14.0	3.5	0.036	14.0	3.5	2.2	1	1	1	2	2	2	0	Prefoldin	subunit
DUF4988	PF16378.5	gi|284162055|ref|YP_003400678.1|	-	0.038	13.7	4.1	0.1	12.2	2.8	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function
BLOC1_2	PF10046.9	gi|284162055|ref|YP_003400678.1|	-	0.039	14.3	6.9	0.13	12.6	6.9	1.9	1	1	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Fez1	PF06818.15	gi|284162055|ref|YP_003400678.1|	-	0.039	14.4	3.4	0.047	14.1	3.4	1.1	1	0	0	1	1	1	0	Fez1
Fib_alpha	PF08702.10	gi|284162055|ref|YP_003400678.1|	-	0.041	14.1	5.2	0.12	12.6	2.1	2.0	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Cauli_AT	PF03233.13	gi|284162055|ref|YP_003400678.1|	-	0.042	13.8	6.5	0.049	13.6	6.5	1.1	1	0	0	1	1	1	0	Aphid	transmission	protein
TMPIT	PF07851.13	gi|284162055|ref|YP_003400678.1|	-	0.051	12.8	2.1	0.056	12.7	2.1	1.0	1	0	0	1	1	1	0	TMPIT-like	protein
DUF16	PF01519.16	gi|284162055|ref|YP_003400678.1|	-	0.066	13.7	5.3	0.18	12.3	5.3	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
DASH_Duo1	PF08651.10	gi|284162055|ref|YP_003400678.1|	-	0.068	13.0	3.2	3.1	7.6	1.1	2.2	1	1	1	2	2	2	0	DASH	complex	subunit	Duo1
Fmp27_WPPW	PF10359.9	gi|284162055|ref|YP_003400678.1|	-	0.068	12.0	1.9	0.074	11.9	1.9	1.0	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
Hemagglutinin	PF00509.18	gi|284162055|ref|YP_003400678.1|	-	0.075	11.4	2.5	0.076	11.4	2.5	1.0	1	0	0	1	1	1	0	Haemagglutinin
Tropomyosin_1	PF12718.7	gi|284162055|ref|YP_003400678.1|	-	0.084	13.0	7.0	0.21	11.8	7.0	1.7	1	1	0	1	1	1	0	Tropomyosin	like
FlxA	PF14282.6	gi|284162055|ref|YP_003400678.1|	-	0.091	12.8	2.4	0.14	12.2	1.0	1.8	2	0	0	2	2	2	0	FlxA-like	protein
Syntaxin-6_N	PF09177.11	gi|284162055|ref|YP_003400678.1|	-	0.094	13.3	4.6	0.26	11.9	4.6	1.7	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
Nup54	PF13874.6	gi|284162055|ref|YP_003400678.1|	-	0.1	12.7	2.1	0.13	12.4	2.1	1.4	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
ABC_tran_CTD	PF16326.5	gi|284162055|ref|YP_003400678.1|	-	0.1	12.8	7.7	0.61	10.4	7.4	2.2	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
AAA_23	PF13476.6	gi|284162055|ref|YP_003400678.1|	-	0.11	13.0	7.1	0.13	12.8	7.1	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4446	PF14584.6	gi|284162055|ref|YP_003400678.1|	-	0.12	12.3	2.6	0.11	12.4	1.1	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
Noelin-1	PF12308.8	gi|284162055|ref|YP_003400678.1|	-	0.17	11.9	1.3	2.5	8.1	0.2	2.0	1	1	1	2	2	2	0	Neurogenesis	glycoprotein
YkyA	PF10368.9	gi|284162055|ref|YP_003400678.1|	-	0.19	11.4	6.5	0.23	11.1	6.5	1.2	1	0	0	1	1	1	0	Putative	cell-wall	binding	lipoprotein
SlyX	PF04102.12	gi|284162055|ref|YP_003400678.1|	-	0.27	11.9	1.8	5.8	7.6	0.5	2.3	1	1	1	2	2	2	0	SlyX
DUF4795	PF16043.5	gi|284162055|ref|YP_003400678.1|	-	0.28	10.8	6.6	0.38	10.3	6.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
Spc24	PF08286.11	gi|284162055|ref|YP_003400678.1|	-	0.33	11.2	4.6	0.22	11.8	2.2	1.7	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
TMF_DNA_bd	PF12329.8	gi|284162055|ref|YP_003400678.1|	-	0.48	10.5	11.1	0.085	12.9	4.5	2.1	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Matrilin_ccoil	PF10393.9	gi|284162055|ref|YP_003400678.1|	-	0.64	9.9	4.5	0.85	9.5	2.1	2.2	2	1	0	2	2	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Csm1_N	PF18504.1	gi|284162055|ref|YP_003400678.1|	-	0.77	10.1	9.5	1.9	8.9	3.9	2.3	1	1	1	2	2	2	0	Csm1	N-terminal	domain
ETC_C1_NDUFA5	PF04716.14	gi|284162055|ref|YP_003400678.1|	-	0.94	9.3	5.3	1.8	8.4	0.2	2.3	2	1	0	2	2	2	0	ETC	complex	I	subunit	conserved	region
DUF1192	PF06698.11	gi|284162055|ref|YP_003400678.1|	-	1	9.4	6.0	0.65	10.1	1.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1192)
DUF3782	PF12644.7	gi|284162055|ref|YP_003400678.1|	-	1.2	9.3	5.0	2.7	8.2	2.6	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3782)
APG6_N	PF17675.1	gi|284162055|ref|YP_003400678.1|	-	1.6	9.3	7.4	5.3	7.6	7.4	1.8	1	1	0	1	1	1	0	Apg6	coiled-coil	region
Trigger_C	PF05698.14	gi|284162056|ref|YP_003400679.1|	-	0.002	18.1	0.3	0.002	18.1	0.3	1.5	2	0	0	2	2	2	1	Bacterial	trigger	factor	protein	(TF)	C-terminus
HALZ	PF02183.18	gi|284162056|ref|YP_003400679.1|	-	0.012	15.8	1.0	9.5	6.5	0.0	2.8	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
DP	PF08781.10	gi|284162056|ref|YP_003400679.1|	-	0.021	14.7	0.2	0.027	14.4	0.2	1.4	1	0	0	1	1	1	0	Transcription	factor	DP
HJURP_C	PF12347.8	gi|284162056|ref|YP_003400679.1|	-	0.22	11.6	3.8	0.12	12.4	1.0	2.0	2	1	1	3	3	3	0	Holliday	junction	regulator	protein	family	C-terminal	repeat
DUF919	PF06034.11	gi|284162056|ref|YP_003400679.1|	-	0.67	9.8	8.7	0.18	11.7	4.2	2.0	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
DUF202	PF02656.15	gi|284162057|ref|YP_003400680.1|	-	0.026	15.0	0.3	0.036	14.5	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
Col_cuticle_N	PF01484.17	gi|284162057|ref|YP_003400680.1|	-	0.12	12.4	1.2	0.12	12.4	1.2	1.5	2	0	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
Prim-Pol	PF09250.11	gi|284162058|ref|YP_003400681.1|	-	4.4e-19	69.4	0.0	7.3e-19	68.7	0.0	1.2	1	0	0	1	1	1	1	Bifunctional	DNA	primase/polymerase,	N-terminal
Metallophos_3	PF14582.6	gi|284162058|ref|YP_003400681.1|	-	0.01	15.2	0.0	0.015	14.6	0.0	1.3	1	0	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
RHH_1	PF01402.21	gi|284162059|ref|YP_003400682.1|	-	0.05	13.6	0.1	1.3	9.1	0.0	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
HTH_5	PF01022.20	gi|284162060|ref|YP_003400683.1|	-	0.00013	21.7	0.0	0.00021	21.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.17	gi|284162060|ref|YP_003400683.1|	-	0.00031	20.5	0.1	0.00068	19.4	0.1	1.5	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.6	gi|284162060|ref|YP_003400683.1|	-	0.00062	20.2	0.1	0.0014	19.1	0.1	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|284162060|ref|YP_003400683.1|	-	0.0032	17.0	0.0	0.0066	16.0	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|284162060|ref|YP_003400683.1|	-	0.0037	17.4	0.0	0.0081	16.3	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
ApoLp-III	PF07464.11	gi|284162060|ref|YP_003400683.1|	-	0.021	14.9	1.1	0.026	14.6	0.1	1.6	2	0	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
MarR	PF01047.22	gi|284162060|ref|YP_003400683.1|	-	0.041	13.8	0.3	0.12	12.3	0.0	1.8	2	0	0	2	2	2	0	MarR	family
MtaB	PF12176.8	gi|284162060|ref|YP_003400683.1|	-	0.045	12.6	0.2	0.055	12.2	0.2	1.2	1	0	0	1	1	1	0	Methanol-cobalamin	methyltransferase	B	subunit
PadR	PF03551.14	gi|284162060|ref|YP_003400683.1|	-	0.048	13.6	0.1	0.12	12.3	0.1	1.6	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|284162060|ref|YP_003400683.1|	-	0.09	12.7	0.1	0.17	11.7	0.1	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HU-CCDC81_euk_1	PF14908.6	gi|284162060|ref|YP_003400683.1|	-	0.097	12.8	0.1	0.26	11.4	0.1	1.7	1	1	0	1	1	1	0	CCDC81	eukaryotic	HU	domain	1
Ribosomal_L18_c	PF14204.6	gi|284162060|ref|YP_003400683.1|	-	0.14	13.1	4.7	0.46	11.5	1.6	2.3	2	0	0	2	2	2	0	Ribosomal	L18	C-terminal	region
HTH_40	PF14493.6	gi|284162060|ref|YP_003400683.1|	-	0.62	10.6	3.5	1.5	9.3	0.4	2.8	2	2	1	3	3	3	0	Helix-turn-helix	domain
Radical_SAM	PF04055.21	gi|284162061|ref|YP_003400684.1|	-	7.3e-11	42.7	0.3	1.9e-10	41.4	0.2	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
HHH_3	PF12836.7	gi|284162061|ref|YP_003400684.1|	-	4.2e-09	36.5	0.0	1.4e-08	34.8	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|284162061|ref|YP_003400684.1|	-	0.0015	18.3	0.1	0.016	15.1	0.1	2.7	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
DUF655	PF04919.12	gi|284162061|ref|YP_003400684.1|	-	0.0048	16.9	0.2	0.092	12.7	0.0	2.5	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF655)
PsbU	PF06514.11	gi|284162061|ref|YP_003400684.1|	-	0.005	16.8	0.0	0.018	15.0	0.0	1.9	1	0	0	1	1	1	1	Photosystem	II	12	kDa	extrinsic	protein	(PsbU)
HHH_5	PF14520.6	gi|284162061|ref|YP_003400684.1|	-	0.024	15.2	0.1	0.24	12.0	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
HHH_8	PF14716.6	gi|284162061|ref|YP_003400684.1|	-	0.18	12.2	0.2	0.65	10.4	0.1	2.0	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
CxxCxxCC	PF03692.15	gi|284162062|ref|YP_003400685.1|	-	0.1	13.3	4.7	0.2	12.3	4.7	1.6	1	0	0	1	1	1	0	Putative	zinc-	or	iron-chelating	domain
Methyltranf_PUA	PF13636.6	gi|284162063|ref|YP_003400686.1|	-	8.7e-12	44.8	0.7	2.2e-11	43.6	0.7	1.7	1	1	0	1	1	1	1	RNA-binding	PUA-like	domain	of	methyltransferase	RsmF
CPSF73-100_C	PF11718.8	gi|284162063|ref|YP_003400686.1|	-	0.043	13.4	0.0	0.053	13.1	0.0	1.1	1	0	0	1	1	1	0	Pre-mRNA	3'-end-processing	endonuclease	polyadenylation	factor	C-term
Sterile	PF03015.19	gi|284162063|ref|YP_003400686.1|	-	0.14	12.4	0.1	0.25	11.6	0.1	1.4	1	0	0	1	1	1	0	Male	sterility	protein
EF1_GNE	PF00736.19	gi|284162064|ref|YP_003400687.1|	-	1.8e-21	76.1	2.8	2e-21	76.0	2.8	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
DUF1610	PF07754.11	gi|284162065|ref|YP_003400688.1|	-	1.9e-06	27.7	18.9	5.4e-06	26.3	7.3	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
zf-Mss51	PF13824.6	gi|284162065|ref|YP_003400688.1|	-	0.0086	16.2	10.0	0.08	13.0	3.4	2.1	1	1	1	2	2	2	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
C1_2	PF03107.16	gi|284162065|ref|YP_003400688.1|	-	0.019	15.3	2.3	0.019	15.3	2.3	2.7	1	1	2	3	3	3	0	C1	domain
DZR	PF12773.7	gi|284162065|ref|YP_003400688.1|	-	0.028	14.4	12.8	0.63	10.1	12.8	2.3	1	1	0	1	1	1	0	Double	zinc	ribbon
C1_1	PF00130.22	gi|284162065|ref|YP_003400688.1|	-	0.033	14.1	7.0	0.25	11.3	0.1	2.3	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
OrfB_Zn_ribbon	PF07282.11	gi|284162065|ref|YP_003400688.1|	-	0.056	13.4	7.7	0.036	14.0	6.1	1.6	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Rhodanese_C	PF12368.8	gi|284162065|ref|YP_003400688.1|	-	0.075	13.4	6.9	0.087	13.2	6.9	1.1	1	0	0	1	1	1	0	Rhodanase	C-terminal
zinc-ribbons_6	PF07191.12	gi|284162065|ref|YP_003400688.1|	-	0.081	12.9	8.4	0.39	10.7	8.4	1.9	1	1	0	1	1	1	0	zinc-ribbons
zf-CHY	PF05495.12	gi|284162065|ref|YP_003400688.1|	-	0.11	13.0	9.5	0.72	10.4	9.5	1.9	1	1	0	1	1	1	0	CHY	zinc	finger
zf-AN1	PF01428.16	gi|284162065|ref|YP_003400688.1|	-	0.11	12.6	10.9	1.1	9.4	3.8	2.4	1	1	0	2	2	2	0	AN1-like	Zinc	finger
zf-RRN7	PF11781.8	gi|284162065|ref|YP_003400688.1|	-	0.24	11.1	0.5	0.24	11.1	0.5	3.4	3	1	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-H2C2_2	PF13465.6	gi|284162065|ref|YP_003400688.1|	-	0.26	11.8	0.7	0.26	11.8	0.7	3.6	2	1	2	4	4	4	0	Zinc-finger	double	domain
HypA	PF01155.19	gi|284162065|ref|YP_003400688.1|	-	0.54	10.3	8.7	3.9	7.5	3.5	2.0	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-ribbon_3	PF13248.6	gi|284162065|ref|YP_003400688.1|	-	0.57	9.7	17.6	0.8	9.2	1.0	3.8	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-UBR	PF02207.20	gi|284162065|ref|YP_003400688.1|	-	0.57	10.4	8.8	5.6	7.2	8.8	2.1	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zf-ACC	PF17848.1	gi|284162065|ref|YP_003400688.1|	-	0.67	10.1	0.3	0.67	10.1	0.3	3.6	3	1	1	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zinc_ribbon_10	PF10058.9	gi|284162065|ref|YP_003400688.1|	-	0.74	9.6	16.8	4.2	7.2	0.5	3.6	1	1	2	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Rubredoxin_2	PF18073.1	gi|284162065|ref|YP_003400688.1|	-	0.74	9.6	0.3	0.74	9.6	0.3	3.8	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
PolC_DP2	PF03833.13	gi|284162065|ref|YP_003400688.1|	-	1.1	7.0	4.8	1.2	6.9	4.8	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zf-HIT	PF04438.16	gi|284162065|ref|YP_003400688.1|	-	1.4	8.9	20.6	8.9	6.3	11.4	3.4	2	1	1	3	3	3	0	HIT	zinc	finger
zinc_ribbon_2	PF13240.6	gi|284162065|ref|YP_003400688.1|	-	1.8	8.4	18.4	0.44	10.3	1.2	3.5	3	1	0	3	3	3	0	zinc-ribbon	domain
DUF2752	PF10825.8	gi|284162065|ref|YP_003400688.1|	-	2.5	8.3	7.9	4.6	7.4	0.5	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
zf-C2H2	PF00096.26	gi|284162065|ref|YP_003400688.1|	-	3.3	8.3	17.1	8.4	7.1	0.7	3.9	4	0	0	4	4	4	0	Zinc	finger,	C2H2	type
zinc_ribbon_4	PF13717.6	gi|284162065|ref|YP_003400688.1|	-	3.4	7.7	14.3	14	5.7	0.5	3.6	2	1	1	3	3	3	0	zinc-ribbon	domain
zf-C2H2_6	PF13912.6	gi|284162065|ref|YP_003400688.1|	-	4	7.5	0.0	4	7.5	0.0	3.5	4	0	0	4	4	3	0	C2H2-type	zinc	finger
zf_UBZ	PF18439.1	gi|284162065|ref|YP_003400688.1|	-	5.5	6.7	14.9	5	6.8	0.2	3.8	3	1	1	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
Zn-ribbon_8	PF09723.10	gi|284162065|ref|YP_003400688.1|	-	6.1	7.1	19.8	1.9e+02	2.3	0.1	4.0	2	1	0	2	2	2	0	Zinc	ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|284162065|ref|YP_003400688.1|	-	8.6	6.4	19.4	2.4	8.1	0.2	3.7	3	1	1	4	4	4	0	SprT-like	zinc	ribbon	domain
TFIIS_C	PF01096.18	gi|284162065|ref|YP_003400688.1|	-	9.2	6.2	18.5	11	6.0	0.4	4.0	3	1	1	4	4	4	0	Transcription	factor	S-II	(TFIIS)
CCCAP	PF15964.5	gi|284162067|ref|YP_003400690.1|	-	0.068	11.5	0.8	0.077	11.3	0.8	1.0	1	0	0	1	1	1	0	Centrosomal	colon	cancer	autoantigen	protein	family
DUF2226	PF09987.9	gi|284162067|ref|YP_003400690.1|	-	0.068	12.5	3.2	0.077	12.3	3.2	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
Pro-kuma_activ	PF09286.11	gi|284162067|ref|YP_003400690.1|	-	0.17	12.2	0.0	0.18	12.1	0.0	1.2	1	0	0	1	1	1	0	Pro-kumamolisin,	activation	domain
HTH_34	PF13601.6	gi|284162068|ref|YP_003400691.1|	-	0.00031	20.9	0.3	0.00042	20.4	0.3	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Abp2	PF09441.10	gi|284162068|ref|YP_003400691.1|	-	0.078	13.0	0.0	0.093	12.8	0.0	1.0	1	0	0	1	1	1	0	ARS	binding	protein	2
Ribosomal_L29	PF00831.23	gi|284162070|ref|YP_003400693.1|	-	0.06	13.3	0.1	0.21	11.6	0.1	1.9	1	0	0	1	1	1	0	Ribosomal	L29	protein
DUF3906	PF13046.6	gi|284162070|ref|YP_003400693.1|	-	0.095	12.8	1.6	1.8	8.7	0.2	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3906)
AA_kinase	PF00696.28	gi|284162071|ref|YP_003400694.1|	-	3.8e-31	108.5	1.6	2.1e-30	106.1	1.6	1.8	1	1	0	1	1	1	1	Amino	acid	kinase	family
Pyr_redox_2	PF07992.14	gi|284162071|ref|YP_003400694.1|	-	0.047	12.9	0.0	0.058	12.6	0.0	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|284162071|ref|YP_003400694.1|	-	0.099	13.2	0.1	0.27	11.8	0.1	1.7	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FtsJ	PF01728.19	gi|284162072|ref|YP_003400695.1|	-	1.5e-58	197.9	0.0	1.7e-58	197.7	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.6	gi|284162072|ref|YP_003400695.1|	-	1.6e-05	24.8	0.0	5.5e-05	23.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284162072|ref|YP_003400695.1|	-	5.7e-05	22.9	0.0	0.0025	17.6	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|284162072|ref|YP_003400695.1|	-	0.00022	21.9	0.0	0.0052	17.5	0.0	2.7	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284162072|ref|YP_003400695.1|	-	0.003	18.2	0.0	0.0074	16.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|284162072|ref|YP_003400695.1|	-	0.016	14.9	0.0	0.03	14.1	0.0	1.3	1	1	0	1	1	1	0	Met-10+	like-protein
Methyltr_RsmB-F	PF01189.17	gi|284162072|ref|YP_003400695.1|	-	0.05	13.2	0.0	0.11	12.1	0.0	1.4	1	1	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
TrkA_N	PF02254.18	gi|284162072|ref|YP_003400695.1|	-	0.061	13.6	0.1	0.13	12.6	0.0	1.5	2	0	0	2	2	2	0	TrkA-N	domain
LpxC	PF03331.13	gi|284162072|ref|YP_003400695.1|	-	0.077	12.5	0.0	0.55	9.7	0.0	1.9	1	1	1	2	2	2	0	UDP-3-O-acyl	N-acetylglycosamine	deacetylase
Methyltransf_12	PF08242.12	gi|284162072|ref|YP_003400695.1|	-	0.1	13.3	0.0	0.75	10.6	0.0	2.3	1	1	1	2	2	2	0	Methyltransferase	domain
Methyltransf_PK	PF05891.12	gi|284162072|ref|YP_003400695.1|	-	0.12	11.9	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	AdoMet	dependent	proline	di-methyltransferase
UPF0146	PF03686.13	gi|284162072|ref|YP_003400695.1|	-	0.14	12.0	0.0	0.33	10.8	0.0	1.7	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0146)
Lactamase_B	PF00753.27	gi|284162073|ref|YP_003400696.1|	-	1.3e-08	35.1	0.1	2.6e-08	34.1	0.1	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|284162073|ref|YP_003400696.1|	-	6.9e-07	29.0	0.0	7.9e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|284162073|ref|YP_003400696.1|	-	0.076	12.4	0.1	0.12	11.8	0.1	1.2	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily	domain
Ribosomal_L40e	PF01020.17	gi|284162074|ref|YP_003400697.1|	-	7.6e-06	25.7	4.9	9.3e-06	25.5	4.9	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.6	gi|284162074|ref|YP_003400697.1|	-	0.00029	20.4	1.5	0.00042	19.9	1.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|284162074|ref|YP_003400697.1|	-	0.0012	18.4	5.6	0.002	17.7	5.6	1.3	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DZR	PF12773.7	gi|284162074|ref|YP_003400697.1|	-	0.0014	18.6	0.6	0.0015	18.5	0.6	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|284162074|ref|YP_003400697.1|	-	0.081	12.4	1.4	0.11	12.0	1.4	1.2	1	0	0	1	1	1	0	zinc-ribbon	domain
ABC_tran	PF00005.27	gi|284162075|ref|YP_003400698.1|	-	5.4e-28	98.2	0.0	7.7e-28	97.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162075|ref|YP_003400698.1|	-	3.5e-08	33.6	0.1	0.0018	18.1	0.2	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|284162075|ref|YP_003400698.1|	-	0.0035	17.0	0.1	0.0064	16.2	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|284162075|ref|YP_003400698.1|	-	0.073	12.8	0.1	0.16	11.6	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF2813	PF11398.8	gi|284162075|ref|YP_003400698.1|	-	0.079	12.2	0.0	0.18	11.0	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.6	gi|284162075|ref|YP_003400698.1|	-	0.11	13.0	0.0	0.2	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|284162075|ref|YP_003400698.1|	-	0.12	11.9	0.0	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|284162075|ref|YP_003400698.1|	-	0.16	11.2	0.0	0.33	10.2	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
UPF0182	PF03699.13	gi|284162078|ref|YP_003400701.1|	-	8.4e-259	860.8	21.8	1e-258	860.5	21.8	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0182)
MFS_1	PF07690.16	gi|284162079|ref|YP_003400702.1|	-	3.1e-45	154.6	44.4	9.2e-32	110.3	16.1	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|284162079|ref|YP_003400702.1|	-	1.3e-05	24.3	28.3	0.00036	19.5	9.8	2.3	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.6	gi|284162079|ref|YP_003400702.1|	-	0.00028	19.6	5.6	0.00028	19.6	5.6	2.5	2	1	0	2	2	2	1	MFS/sugar	transport	protein
OATP	PF03137.20	gi|284162079|ref|YP_003400702.1|	-	0.0089	14.4	22.4	0.11	10.7	1.2	3.8	2	2	2	4	4	4	3	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Carboxyl_trans	PF01039.22	gi|284162080|ref|YP_003400703.1|	-	3.2e-68	230.6	0.0	2.2e-66	224.5	0.0	2.1	1	1	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.11	gi|284162080|ref|YP_003400703.1|	-	0.0072	15.8	0.0	0.011	15.3	0.0	1.2	1	0	0	1	1	1	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
SIP	PF04954.13	gi|284162081|ref|YP_003400704.1|	-	0.05	14.1	0.0	0.055	14.0	0.0	1.0	1	0	0	1	1	1	0	Siderophore-interacting	protein
DUF1048	PF06304.11	gi|284162082|ref|YP_003400705.1|	-	0.026	15.0	0.0	0.027	14.9	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1048)
DeoC	PF01791.9	gi|284162084|ref|YP_003400707.1|	-	2.2e-49	168.2	0.8	2.6e-49	168.0	0.8	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
ThiG	PF05690.14	gi|284162084|ref|YP_003400707.1|	-	3.4e-05	23.3	2.0	0.00043	19.7	0.3	2.1	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.17	gi|284162084|ref|YP_003400707.1|	-	0.00095	18.5	0.3	0.17	11.2	0.3	2.5	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase
DUF561	PF04481.12	gi|284162084|ref|YP_003400707.1|	-	0.001	18.3	0.4	0.0023	17.1	0.1	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
NMO	PF03060.15	gi|284162084|ref|YP_003400707.1|	-	0.0016	17.9	0.7	0.0055	16.1	0.2	1.9	2	0	0	2	2	2	1	Nitronate	monooxygenase
Dus	PF01207.17	gi|284162084|ref|YP_003400707.1|	-	0.06	12.4	0.2	11	5.0	0.1	2.5	2	1	1	3	3	3	0	Dihydrouridine	synthase	(Dus)
DHquinase_I	PF01487.15	gi|284162084|ref|YP_003400707.1|	-	0.066	13.5	0.0	0.17	12.1	0.0	1.8	1	1	0	1	1	1	0	Type	I	3-dehydroquinase
AP_endonuc_2	PF01261.24	gi|284162084|ref|YP_003400707.1|	-	0.071	12.5	0.0	0.23	10.9	0.0	1.9	2	1	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
ETF_alpha	PF00766.19	gi|284162084|ref|YP_003400707.1|	-	0.14	12.2	0.7	1.1	9.3	0.1	2.5	3	0	0	3	3	3	0	Electron	transfer	flavoprotein	FAD-binding	domain
DHQS	PF01959.16	gi|284162085|ref|YP_003400708.1|	-	6.8e-124	413.3	4.4	8.2e-124	413.1	4.4	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase	II
OapA	PF04225.12	gi|284162085|ref|YP_003400708.1|	-	0.012	15.7	0.0	2.8	8.1	0.0	2.5	2	0	0	2	2	2	0	Opacity-associated	protein	A	LysM-like	domain
DUF1953	PF09196.10	gi|284162085|ref|YP_003400708.1|	-	0.083	12.7	0.2	1.5	8.7	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1953)
DUF3221	PF11518.8	gi|284162085|ref|YP_003400708.1|	-	0.2	12.0	1.5	17	5.9	0.1	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3221)
RNA_pol_Rpb5_C	PF01191.19	gi|284162086|ref|YP_003400709.1|	-	3.8e-30	103.6	0.5	6.3e-30	102.9	0.5	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
DUF3251	PF11622.8	gi|284162086|ref|YP_003400709.1|	-	0.12	12.0	0.0	0.14	11.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3251)
RNA_pol_Rpb2_1	PF04563.15	gi|284162087|ref|YP_003400710.1|	-	1.4e-44	152.1	0.0	1.8e-42	145.2	0.0	2.0	1	1	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.14	gi|284162087|ref|YP_003400710.1|	-	1.1e-31	109.9	0.0	1.7e-31	109.4	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_3	PF04565.16	gi|284162087|ref|YP_003400710.1|	-	3.3e-27	94.4	0.0	5.8e-27	93.7	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_6	PF00562.28	gi|284162088|ref|YP_003400711.1|	-	2.1e-131	438.6	0.0	2.7e-131	438.2	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_7	PF04560.20	gi|284162088|ref|YP_003400711.1|	-	1.7e-31	108.5	0.1	3.6e-31	107.4	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.13	gi|284162088|ref|YP_003400711.1|	-	2e-23	82.4	0.1	5e-23	81.2	0.1	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|284162088|ref|YP_003400711.1|	-	3.7e-09	37.0	2.5	1.1e-08	35.5	2.5	1.8	1	1	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
zf-UBP	PF02148.19	gi|284162088|ref|YP_003400711.1|	-	0.0016	18.7	1.5	0.0041	17.4	1.5	1.6	1	0	0	1	1	1	1	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
RNA_pol_Rpb2_45	PF10385.9	gi|284162088|ref|YP_003400711.1|	-	0.017	15.4	0.3	0.18	12.1	0.1	2.7	3	0	0	3	3	3	0	RNA	polymerase	beta	subunit	external	1	domain
AbiEi_4	PF13338.6	gi|284162088|ref|YP_003400711.1|	-	0.095	12.9	0.1	9.1	6.5	0.0	2.7	2	0	0	2	2	2	0	Transcriptional	regulator,	AbiEi	antitoxin
TF_Zn_Ribbon	PF08271.12	gi|284162088|ref|YP_003400711.1|	-	0.54	9.8	2.5	1.7	8.2	2.2	1.9	1	1	1	2	2	2	0	TFIIB	zinc-binding
Arc_PepC	PF06819.11	gi|284162088|ref|YP_003400711.1|	-	1.2	9.3	4.2	9	6.5	0.2	2.7	3	0	0	3	3	3	0	Archaeal	Peptidase	A24	C-terminal	Domain
RNA_pol_Rpb1_1	PF04997.12	gi|284162089|ref|YP_003400712.1|	-	1.1e-102	343.5	0.0	1.8e-102	342.9	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|284162089|ref|YP_003400712.1|	-	2.4e-67	226.3	0.0	4.1e-67	225.6	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|284162089|ref|YP_003400712.1|	-	1e-39	136.0	0.0	1.8e-39	135.2	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.17	gi|284162089|ref|YP_003400712.1|	-	3.8e-31	107.2	0.0	7.7e-31	106.2	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.17	gi|284162089|ref|YP_003400712.1|	-	6.2e-26	91.4	0.1	1.1e-25	90.6	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
zf-RING_7	PF02591.15	gi|284162089|ref|YP_003400712.1|	-	0.015	15.4	0.8	3.7	7.8	0.1	3.5	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
Fer4_10	PF13237.6	gi|284162089|ref|YP_003400712.1|	-	0.26	11.4	7.8	0.99	9.6	0.4	3.1	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162089|ref|YP_003400712.1|	-	3.9	7.7	10.2	0.22	11.7	1.1	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
DUF35_N	PF12172.8	gi|284162089|ref|YP_003400712.1|	-	8.1	6.4	8.8	21	5.1	0.1	3.7	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RNA_pol_Rpb1_5	PF04998.17	gi|284162090|ref|YP_003400713.1|	-	6.8e-63	212.6	2.5	9.6e-63	212.1	2.5	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
ExbD	PF02472.16	gi|284162090|ref|YP_003400713.1|	-	0.00031	20.9	2.9	0.00054	20.1	0.9	2.2	2	0	0	2	2	2	1	Biopolymer	transport	protein	ExbD/TolR
Melibiase_2_C	PF17450.2	gi|284162090|ref|YP_003400713.1|	-	0.16	12.3	0.0	1	9.6	0.0	2.4	2	1	1	3	3	3	0	Alpha	galactosidase	A	C-terminal	beta	sandwich	domain
Mrpl_C	PF18502.1	gi|284162090|ref|YP_003400713.1|	-	5	7.5	6.0	27	5.1	1.0	3.5	3	1	2	5	5	5	0	54S	ribosomal	protein	L8	C-terminal	domain
Ribosomal_L7Ae	PF01248.26	gi|284162091|ref|YP_003400714.1|	-	4.3e-18	64.8	0.7	5e-18	64.6	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
ATP-synt_F	PF01990.17	gi|284162091|ref|YP_003400714.1|	-	0.017	15.4	0.0	0.021	15.1	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
HAD_2	PF13419.6	gi|284162091|ref|YP_003400714.1|	-	0.056	13.5	0.0	0.064	13.3	0.0	1.1	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
KH_2	PF07650.17	gi|284162092|ref|YP_003400715.1|	-	3.2e-21	74.9	11.2	1.8e-15	56.5	3.9	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.6	gi|284162092|ref|YP_003400715.1|	-	7.9e-11	41.9	3.1	7.9e-11	41.9	3.1	2.7	1	1	0	2	2	2	1	NusA-like	KH	domain
KH_4	PF13083.6	gi|284162092|ref|YP_003400715.1|	-	6.4e-09	35.6	2.4	5.4e-06	26.2	0.3	2.4	2	0	0	2	2	2	2	KH	domain
KH_1	PF00013.29	gi|284162092|ref|YP_003400715.1|	-	0.00032	20.5	14.5	0.004	16.9	0.8	2.9	1	1	2	3	3	3	2	KH	domain
Ribosom_S12_S23	PF00164.25	gi|284162093|ref|YP_003400716.1|	-	7.8e-52	173.7	0.2	9.4e-52	173.5	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
Ribosomal_S7	PF00177.21	gi|284162094|ref|YP_003400717.1|	-	4.9e-42	143.1	1.4	6.1e-42	142.8	1.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
GTP_EFTU	PF00009.27	gi|284162095|ref|YP_003400718.1|	-	7e-67	224.7	0.1	1.1e-66	224.1	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|284162095|ref|YP_003400718.1|	-	2.2e-29	101.7	0.1	5.3e-29	100.5	0.1	1.7	1	0	0	1	1	1	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|284162095|ref|YP_003400718.1|	-	1.9e-26	92.0	0.4	4.6e-26	90.7	0.4	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|284162095|ref|YP_003400718.1|	-	6e-26	90.3	0.2	1.9e-25	88.7	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|284162095|ref|YP_003400718.1|	-	5.3e-17	62.0	0.1	2.1e-16	60.1	0.1	2.1	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|284162095|ref|YP_003400718.1|	-	7.9e-05	22.7	0.0	0.0002	21.4	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RF3_C	PF16658.5	gi|284162095|ref|YP_003400718.1|	-	0.016	15.0	0.0	0.043	13.7	0.0	1.8	1	1	0	1	1	1	0	Class	II	release	factor	RF3,	C-terminal	domain
Ras	PF00071.22	gi|284162095|ref|YP_003400718.1|	-	0.02	14.5	0.0	0.039	13.5	0.0	1.4	1	0	0	1	1	1	0	Ras	family
TniB	PF05621.11	gi|284162095|ref|YP_003400718.1|	-	0.044	13.2	0.1	0.09	12.2	0.1	1.5	1	0	0	1	1	1	0	Bacterial	TniB	protein
AF2331-like	PF14556.6	gi|284162096|ref|YP_003400719.1|	-	4.3e-45	152.2	8.8	4.7e-45	152.1	8.8	1.0	1	0	0	1	1	1	1	AF2331-like
Thioredoxin	PF00085.20	gi|284162097|ref|YP_003400720.1|	-	1.8e-10	40.7	0.0	2.3e-10	40.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|284162097|ref|YP_003400720.1|	-	2.5e-09	37.6	0.0	3.8e-09	37.0	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_3	PF13192.6	gi|284162097|ref|YP_003400720.1|	-	1.9e-08	34.2	0.2	2.5e-08	33.9	0.1	1.3	1	1	0	1	1	1	1	Thioredoxin	domain
KaiB	PF07689.12	gi|284162097|ref|YP_003400720.1|	-	1.5e-07	31.1	0.0	1.8e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	KaiB	domain
TraF	PF13728.6	gi|284162097|ref|YP_003400720.1|	-	1.7e-07	31.3	0.0	2e-07	31.0	0.0	1.1	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Glutaredoxin	PF00462.24	gi|284162097|ref|YP_003400720.1|	-	2.5e-06	27.6	0.1	3.9e-06	27.0	0.1	1.4	1	0	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.6	gi|284162097|ref|YP_003400720.1|	-	4.3e-06	27.0	0.3	0.012	15.7	0.1	2.1	1	1	0	2	2	2	2	Thioredoxin
HyaE	PF07449.11	gi|284162097|ref|YP_003400720.1|	-	6.1e-06	26.2	0.0	7.3e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
DUF836	PF05768.14	gi|284162097|ref|YP_003400720.1|	-	7.5e-05	23.1	0.0	8.2e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_8	PF13905.6	gi|284162097|ref|YP_003400720.1|	-	0.0019	18.5	0.8	0.75	10.2	0.1	2.3	1	1	1	2	2	2	2	Thioredoxin-like
TrbC_Ftype	PF09673.10	gi|284162097|ref|YP_003400720.1|	-	0.019	15.0	0.0	0.022	14.8	0.0	1.3	1	1	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
Thioredoxin_9	PF14595.6	gi|284162097|ref|YP_003400720.1|	-	0.032	14.0	0.0	0.035	13.9	0.0	1.1	1	0	0	1	1	1	0	Thioredoxin
Thioredoxin_7	PF13899.6	gi|284162097|ref|YP_003400720.1|	-	0.06	13.5	0.0	0.098	12.9	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin-like
DUF953	PF06110.11	gi|284162097|ref|YP_003400720.1|	-	0.12	12.0	0.6	1.9	8.1	0.2	2.3	2	1	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF953)
DSBA	PF01323.20	gi|284162097|ref|YP_003400720.1|	-	0.18	11.6	0.4	3.9	7.2	0.2	2.0	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
Trm56	PF01994.16	gi|284162098|ref|YP_003400721.1|	-	2.2e-46	156.7	0.0	2.8e-46	156.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.19	gi|284162098|ref|YP_003400721.1|	-	0.087	13.0	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	SpoU	rRNA	Methylase	family
PcrB	PF01884.17	gi|284162099|ref|YP_003400722.1|	-	1.7e-48	165.0	0.0	2.3e-48	164.6	0.0	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.21	gi|284162099|ref|YP_003400722.1|	-	4.4e-10	39.4	0.0	2.6e-08	33.6	0.0	2.1	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|284162099|ref|YP_003400722.1|	-	1.2e-09	37.9	0.2	1.8e-06	27.4	0.0	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.15	gi|284162099|ref|YP_003400722.1|	-	6.6e-08	32.3	1.2	3e-05	23.6	0.1	2.3	2	0	0	2	2	2	2	Nitronate	monooxygenase
IMPDH	PF00478.25	gi|284162099|ref|YP_003400722.1|	-	1.3e-07	31.0	0.0	0.00078	18.5	0.0	2.2	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
NanE	PF04131.14	gi|284162099|ref|YP_003400722.1|	-	3.7e-06	26.3	1.2	0.00027	20.2	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.21	gi|284162099|ref|YP_003400722.1|	-	1.1e-05	24.8	0.0	2.1e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|284162099|ref|YP_003400722.1|	-	9.6e-05	21.6	0.0	0.007	15.5	0.1	2.1	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
TMP-TENI	PF02581.17	gi|284162099|ref|YP_003400722.1|	-	0.00024	20.5	0.2	0.00077	18.8	0.0	1.9	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
Pterin_bind	PF00809.22	gi|284162099|ref|YP_003400722.1|	-	0.0036	17.0	0.7	0.12	12.0	0.0	2.2	2	0	0	2	2	2	1	Pterin	binding	enzyme
Trp_syntA	PF00290.20	gi|284162099|ref|YP_003400722.1|	-	0.004	16.0	0.8	0.037	12.9	0.1	2.4	2	1	1	3	3	3	1	Tryptophan	synthase	alpha	chain
FMN_dh	PF01070.18	gi|284162099|ref|YP_003400722.1|	-	0.0094	15.0	0.5	0.023	13.8	0.0	1.7	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
G3P_antiterm	PF04309.12	gi|284162099|ref|YP_003400722.1|	-	0.016	14.7	0.1	0.041	13.3	0.0	1.6	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
PEP_mutase	PF13714.6	gi|284162099|ref|YP_003400722.1|	-	0.041	13.3	0.0	0.72	9.3	0.0	2.2	2	0	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Epimerase	PF01370.21	gi|284162100|ref|YP_003400723.1|	-	5.9e-22	78.3	0.1	9.4e-22	77.6	0.1	1.3	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|284162100|ref|YP_003400723.1|	-	9.3e-13	48.3	0.0	4.9e-12	45.9	0.0	2.1	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
RmlD_sub_bind	PF04321.17	gi|284162100|ref|YP_003400723.1|	-	4.9e-12	45.6	0.0	1.3e-11	44.1	0.0	1.7	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|284162100|ref|YP_003400723.1|	-	8.6e-10	38.2	0.2	2.3e-08	33.5	0.0	2.4	2	1	0	2	2	2	1	Male	sterility	protein
3Beta_HSD	PF01073.19	gi|284162100|ref|YP_003400723.1|	-	4.7e-08	32.4	0.2	4.7e-08	32.4	0.2	1.6	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.6	gi|284162100|ref|YP_003400723.1|	-	2.2e-05	24.4	0.1	8.3e-05	22.5	0.1	1.9	1	1	0	1	1	1	1	NAD(P)H-binding
MCH	PF02289.16	gi|284162101|ref|YP_003400724.1|	-	7.6e-98	327.6	0.0	8.4e-98	327.5	0.0	1.0	1	0	0	1	1	1	1	Cyclohydrolase	(MCH)
Aconitase_C	PF00694.19	gi|284162102|ref|YP_003400725.1|	-	2.2e-18	66.9	0.2	6.3e-17	62.1	0.2	2.1	1	1	0	1	1	1	1	Aconitase	C-terminal	domain
GATase_7	PF13537.6	gi|284162103|ref|YP_003400726.1|	-	1.5e-19	70.1	0.0	3.2e-19	69.0	0.0	1.6	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|284162103|ref|YP_003400726.1|	-	4e-19	69.1	0.0	9.1e-19	68.0	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|284162103|ref|YP_003400726.1|	-	1.7e-06	27.1	0.0	9.7e-06	24.7	0.0	2.0	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
Pribosyltran	PF00156.27	gi|284162103|ref|YP_003400726.1|	-	1.5e-05	24.6	0.1	3e-05	23.6	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_2	PF00310.21	gi|284162103|ref|YP_003400726.1|	-	0.00052	18.8	0.0	0.0014	17.4	0.0	1.7	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
Ribosomal_L37e	PF01907.19	gi|284162104|ref|YP_003400727.1|	-	9.7e-22	76.9	12.4	1.1e-21	76.7	12.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DUF35_N	PF12172.8	gi|284162104|ref|YP_003400727.1|	-	3.2e-05	23.7	3.6	5.7e-05	22.9	3.6	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.19	gi|284162104|ref|YP_003400727.1|	-	0.06	13.4	0.5	0.068	13.2	0.5	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF2688	PF10892.8	gi|284162104|ref|YP_003400727.1|	-	0.86	9.1	7.2	0.1	12.1	2.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2688)
LSM	PF01423.22	gi|284162105|ref|YP_003400728.1|	-	3.4e-23	81.1	0.4	3.7e-23	81.0	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|284162105|ref|YP_003400728.1|	-	1.7e-05	24.9	0.0	1.8e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
Hfq	PF17209.3	gi|284162105|ref|YP_003400728.1|	-	0.087	12.5	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Hfq	protein
Gate	PF07670.14	gi|284162106|ref|YP_003400729.1|	-	9.6e-05	22.6	15.6	0.0034	17.7	3.4	3.0	2	2	1	3	3	3	2	Nucleoside	recognition
DUF2626	PF11117.8	gi|284162106|ref|YP_003400729.1|	-	0.13	13.0	0.7	0.13	13.0	0.7	3.8	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF2626)
DUF373	PF04123.13	gi|284162106|ref|YP_003400729.1|	-	8.9	5.7	19.1	0.25	10.8	10.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
Response_reg	PF00072.24	gi|284162107|ref|YP_003400730.1|	-	1.8e-24	86.0	3.2	2.1e-24	85.9	3.2	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
MTD	PF01993.18	gi|284162107|ref|YP_003400730.1|	-	0.02	14.3	0.1	0.024	14.0	0.1	1.1	1	0	0	1	1	1	0	methylene-5,6,7,8-tetrahydromethanopterin	dehydrogenase
Histidinol_dh	PF00815.20	gi|284162108|ref|YP_003400731.1|	-	1.2e-159	531.8	0.1	1.6e-159	531.3	0.1	1.1	1	0	0	1	1	1	1	Histidinol	dehydrogenase
tRNA-synt_2	PF00152.20	gi|284162109|ref|YP_003400732.1|	-	2.2e-97	325.9	0.0	2.8e-97	325.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|284162109|ref|YP_003400732.1|	-	2.1e-17	62.9	0.1	3.6e-17	62.1	0.1	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|284162109|ref|YP_003400732.1|	-	4.6e-05	23.0	0.6	0.044	13.3	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
GHMP_kinases_N	PF00288.26	gi|284162110|ref|YP_003400733.1|	-	4.4e-17	62.1	0.1	1.4e-16	60.4	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|284162110|ref|YP_003400733.1|	-	3e-11	43.5	0.2	7.4e-11	42.3	0.1	1.6	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
GalKase_gal_bdg	PF10509.9	gi|284162110|ref|YP_003400733.1|	-	0.0016	18.0	0.1	0.0038	16.7	0.1	1.7	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
SpoVG	PF04026.12	gi|284162111|ref|YP_003400734.1|	-	2.2e-30	104.6	0.1	2.6e-30	104.4	0.1	1.0	1	0	0	1	1	1	1	SpoVG
VIT1	PF01988.19	gi|284162112|ref|YP_003400735.1|	-	1.5e-15	57.7	20.6	1.1e-09	38.5	6.0	2.0	1	1	1	2	2	2	2	VIT	family
TMEM65	PF10507.9	gi|284162112|ref|YP_003400735.1|	-	0.047	13.6	1.6	0.092	12.7	1.6	1.5	1	0	0	1	1	1	0	Transmembrane	protein	65
HycI	PF01750.18	gi|284162113|ref|YP_003400736.1|	-	5e-26	91.1	0.1	6.1e-26	90.8	0.1	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
Aldo_ket_red	PF00248.21	gi|284162114|ref|YP_003400737.1|	-	4.9e-57	193.4	0.0	2.3e-55	187.8	0.0	2.0	1	1	0	1	1	1	1	Aldo/keto	reductase	family
GP46	PF07409.12	gi|284162114|ref|YP_003400737.1|	-	0.14	12.0	0.0	0.27	11.0	0.0	1.5	1	0	0	1	1	1	0	Phage	protein	GP46
Ni_hydr_CYTB	PF01292.20	gi|284162115|ref|YP_003400738.1|	-	3.2e-19	69.2	15.0	3.8e-19	69.0	15.0	1.1	1	0	0	1	1	1	1	Prokaryotic	cytochrome	b561
DUF4405	PF14358.6	gi|284162115|ref|YP_003400738.1|	-	0.0015	19.0	4.2	0.0015	19.0	4.2	2.8	2	2	0	2	2	2	2	Domain	of	unknown	function	(DUF4405)
NiFeSe_Hases	PF00374.19	gi|284162116|ref|YP_003400739.1|	-	3e-99	333.2	0.9	3.4e-66	224.2	0.0	3.1	3	0	0	3	3	3	3	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.22	gi|284162117|ref|YP_003400740.1|	-	2.6e-28	98.4	0.1	4e-28	97.9	0.1	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NiFe_hyd_SSU_C	PF14720.6	gi|284162117|ref|YP_003400740.1|	-	4.2e-26	91.1	11.5	2.1e-25	88.9	6.6	2.3	2	0	0	2	2	2	2	NiFe/NiFeSe	hydrogenase	small	subunit	C-terminal
TAT_signal	PF10518.9	gi|284162117|ref|YP_003400740.1|	-	0.001	18.8	0.7	0.001	18.8	0.7	2.0	2	0	0	2	2	2	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
SopE_GEF	PF07487.13	gi|284162117|ref|YP_003400740.1|	-	0.19	11.8	0.1	0.34	11.0	0.1	1.4	1	0	0	1	1	1	0	SopE	GEF	domain
PNP_UDP_1	PF01048.20	gi|284162118|ref|YP_003400741.1|	-	4.6e-49	166.8	0.0	5.3e-49	166.6	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Pribosyltran	PF00156.27	gi|284162119|ref|YP_003400742.1|	-	4.9e-18	65.1	0.0	7.5e-18	64.5	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|284162119|ref|YP_003400742.1|	-	0.019	14.4	0.0	0.025	14.0	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Rep_trans	PF02486.19	gi|284162119|ref|YP_003400742.1|	-	0.041	13.6	0.0	0.067	12.9	0.0	1.3	1	0	0	1	1	1	0	Replication	initiation	factor
PTS_2-RNA	PF01885.16	gi|284162120|ref|YP_003400743.1|	-	1.3e-27	97.0	0.0	1.6e-27	96.7	0.0	1.0	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
DUF531	PF04407.12	gi|284162121|ref|YP_003400744.1|	-	1.3e-70	236.9	0.0	1.5e-70	236.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF531)
Methyltrn_RNA_4	PF09936.9	gi|284162121|ref|YP_003400744.1|	-	0.047	13.6	0.0	0.077	12.8	0.0	1.6	1	1	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
POR	PF01558.18	gi|284162122|ref|YP_003400745.1|	-	3.6e-43	147.7	0.2	4.2e-43	147.5	0.2	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Mnd1	PF03962.15	gi|284162122|ref|YP_003400745.1|	-	0.037	14.3	0.1	0.081	13.2	0.1	1.6	1	0	0	1	1	1	0	Mnd1	HTH	domain
ABC_tran	PF00005.27	gi|284162123|ref|YP_003400746.1|	-	4e-32	111.6	0.0	6.1e-32	111.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162123|ref|YP_003400746.1|	-	4.9e-11	43.0	0.3	3.8e-05	23.7	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284162123|ref|YP_003400746.1|	-	2.8e-06	27.0	0.1	0.014	14.8	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|284162123|ref|YP_003400746.1|	-	0.00014	22.4	0.0	0.00021	21.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|284162123|ref|YP_003400746.1|	-	0.00014	21.5	0.0	0.00027	20.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|284162123|ref|YP_003400746.1|	-	0.0002	21.8	0.0	0.00029	21.2	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.6	gi|284162123|ref|YP_003400746.1|	-	0.00049	19.9	0.0	0.23	11.1	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|284162123|ref|YP_003400746.1|	-	0.012	15.5	0.0	0.021	14.7	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
HSM3_N	PF18795.1	gi|284162123|ref|YP_003400746.1|	-	0.023	14.1	0.3	0.034	13.6	0.3	1.3	1	0	0	1	1	1	0	DNA	mismatch	repair	protein	HSM3,	N	terminal	domain
AAA_22	PF13401.6	gi|284162123|ref|YP_003400746.1|	-	0.024	14.9	0.1	0.34	11.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.19	gi|284162123|ref|YP_003400746.1|	-	0.027	14.0	0.1	0.12	11.9	0.0	1.9	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_27	PF13514.6	gi|284162123|ref|YP_003400746.1|	-	0.028	14.0	0.0	0.045	13.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|284162123|ref|YP_003400746.1|	-	0.038	14.4	0.0	0.7	10.3	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|284162123|ref|YP_003400746.1|	-	0.065	13.2	0.3	0.35	10.9	0.1	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|284162123|ref|YP_003400746.1|	-	0.07	12.8	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.6	gi|284162123|ref|YP_003400746.1|	-	0.084	13.1	0.1	0.94	9.8	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
MukB	PF04310.12	gi|284162123|ref|YP_003400746.1|	-	0.13	12.0	0.3	1.1	9.0	0.0	2.0	2	0	0	2	2	2	0	MukB	N-terminal
AAA_14	PF13173.6	gi|284162123|ref|YP_003400746.1|	-	0.15	12.1	0.0	1.7	8.7	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.12	gi|284162123|ref|YP_003400746.1|	-	0.16	11.2	0.0	0.26	10.5	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
DUF815	PF05673.13	gi|284162123|ref|YP_003400746.1|	-	0.16	11.1	0.0	0.45	9.6	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
FecCD	PF01032.18	gi|284162124|ref|YP_003400747.1|	-	3.3e-93	312.1	40.5	4.2e-93	311.8	40.5	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.17	gi|284162124|ref|YP_003400747.1|	-	0.00033	20.2	23.6	0.00043	19.9	22.8	1.5	1	1	0	1	1	1	1	ABC	3	transport	family
Peripla_BP_2	PF01497.18	gi|284162125|ref|YP_003400748.1|	-	2.8e-35	122.0	0.8	3.9e-35	121.5	0.8	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ZnuA	PF01297.17	gi|284162125|ref|YP_003400748.1|	-	0.0042	16.5	0.3	1.3	8.3	0.1	2.1	1	1	1	2	2	2	2	Zinc-uptake	complex	component	A	periplasmic
PA28_beta	PF02252.18	gi|284162125|ref|YP_003400748.1|	-	0.029	14.1	0.0	0.072	12.8	0.0	1.6	1	0	0	1	1	1	0	Proteasome	activator	pa28	beta	subunit
Cupin_2	PF07883.11	gi|284162126|ref|YP_003400749.1|	-	0.0015	18.2	0.0	0.002	17.8	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
Pirin_C_2	PF17954.1	gi|284162126|ref|YP_003400749.1|	-	0.0016	18.6	0.0	0.0018	18.4	0.0	1.1	1	0	0	1	1	1	1	Quercetinase	C-terminal	cupin	domain
Methyltransf_2	PF00891.18	gi|284162127|ref|YP_003400750.1|	-	5.2e-16	58.6	0.0	7.1e-16	58.1	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase	domain
Dimerisation2	PF16864.5	gi|284162127|ref|YP_003400750.1|	-	8.1e-11	41.8	0.3	1.4e-10	41.0	0.3	1.4	1	0	0	1	1	1	1	Dimerisation	domain
Methyltransf_23	PF13489.6	gi|284162127|ref|YP_003400750.1|	-	2.7e-06	27.3	0.0	4.2e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284162127|ref|YP_003400750.1|	-	5.2e-06	26.3	0.0	2e-05	24.4	0.0	1.9	1	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284162127|ref|YP_003400750.1|	-	1.3e-05	25.9	0.0	5.3e-05	23.9	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|284162127|ref|YP_003400750.1|	-	2e-05	25.2	0.0	6.1e-05	23.6	0.0	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.9	gi|284162127|ref|YP_003400750.1|	-	0.00013	21.8	0.0	0.00049	19.9	0.0	1.9	1	1	0	1	1	1	1	Lysine	methyltransferase
Methyltransf_11	PF08241.12	gi|284162127|ref|YP_003400750.1|	-	0.00022	21.8	0.0	0.00045	20.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Rrf2	PF02082.20	gi|284162127|ref|YP_003400750.1|	-	0.0098	16.2	0.1	0.025	14.9	0.0	1.7	2	0	0	2	2	2	1	Transcriptional	regulator
Dimerisation	PF08100.11	gi|284162127|ref|YP_003400750.1|	-	0.036	14.1	0.1	0.22	11.6	0.0	2.4	2	0	0	2	2	2	0	Dimerisation	domain
MTS	PF05175.14	gi|284162127|ref|YP_003400750.1|	-	0.06	12.9	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	small	domain
Pox_P4B	PF03292.14	gi|284162127|ref|YP_003400750.1|	-	0.12	10.6	0.0	0.17	10.2	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	P4B	major	core	protein
ssDNA-exonuc_C	PF10141.9	gi|284162127|ref|YP_003400750.1|	-	0.18	11.4	1.1	1.4	8.5	0.1	2.5	3	0	0	3	3	3	0	Single-strand	DNA-specific	exonuclease,	C	terminal	domain
Imm27	PF15590.6	gi|284162128|ref|YP_003400751.1|	-	0.056	13.2	1.5	0.5	10.2	0.2	2.1	2	0	0	2	2	2	0	Immunity	protein	27
GMP_synt_C	PF00958.22	gi|284162129|ref|YP_003400752.1|	-	6.8e-32	109.4	0.0	1.3e-31	108.5	0.0	1.5	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|284162129|ref|YP_003400752.1|	-	4.6e-13	48.9	0.4	7.6e-12	44.9	0.4	2.1	1	1	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|284162129|ref|YP_003400752.1|	-	6.8e-05	22.5	0.0	0.0013	18.3	0.0	2.2	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Arginosuc_synth	PF00764.19	gi|284162129|ref|YP_003400752.1|	-	0.00027	20.4	0.0	0.00048	19.5	0.0	1.4	1	0	0	1	1	1	1	Arginosuccinate	synthase
tRNA_Me_trans	PF03054.16	gi|284162129|ref|YP_003400752.1|	-	0.00037	19.4	0.1	0.024	13.4	0.0	2.2	2	0	0	2	2	2	1	tRNA	methyl	transferase
ThiI	PF02568.14	gi|284162129|ref|YP_003400752.1|	-	0.00072	19.2	0.1	0.0038	16.8	0.1	2.3	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.19	gi|284162129|ref|YP_003400752.1|	-	0.0095	16.0	0.0	0.031	14.3	0.0	1.9	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.21	gi|284162129|ref|YP_003400752.1|	-	0.056	13.1	0.0	0.12	12.1	0.0	1.5	2	0	0	2	2	2	0	Asparagine	synthase
ATP_bind_3	PF01171.20	gi|284162129|ref|YP_003400752.1|	-	0.074	12.8	0.0	0.2	11.4	0.0	1.8	1	1	0	1	1	1	0	PP-loop	family
Peptidase_M54	PF07998.11	gi|284162130|ref|YP_003400753.1|	-	2e-28	99.7	0.1	2.6e-28	99.3	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.24	gi|284162130|ref|YP_003400753.1|	-	0.00044	20.1	0.0	0.00052	19.9	0.0	1.2	1	0	0	1	1	1	1	Matrixin
Metallopep	PF12044.8	gi|284162130|ref|YP_003400753.1|	-	0.061	11.9	0.1	0.083	11.5	0.1	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
DUF4953	PF16313.5	gi|284162130|ref|YP_003400753.1|	-	0.095	11.9	0.1	0.13	11.4	0.1	1.2	1	0	0	1	1	1	0	Met-zincin
Reprolysin_3	PF13582.6	gi|284162130|ref|YP_003400753.1|	-	0.15	12.6	0.0	0.2	12.2	0.0	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Peptidase_M66	PF10462.9	gi|284162130|ref|YP_003400753.1|	-	0.22	10.5	0.0	0.3	10.0	0.0	1.1	1	0	0	1	1	1	0	Peptidase	M66
Clostridium_P47	PF06597.11	gi|284162130|ref|YP_003400753.1|	-	0.27	9.9	0.0	0.37	9.5	0.0	1.1	1	0	0	1	1	1	0	Clostridium	P-47	protein
Reprolysin_4	PF13583.6	gi|284162130|ref|YP_003400753.1|	-	0.28	10.8	0.0	0.4	10.3	0.0	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
TatC	PF00902.18	gi|284162131|ref|YP_003400754.1|	-	7.7e-51	172.9	20.0	9.6e-51	172.6	20.0	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
TRAP_beta	PF05753.14	gi|284162131|ref|YP_003400754.1|	-	0.082	12.3	0.2	5.7	6.3	0.2	2.3	2	0	0	2	2	2	0	Translocon-associated	protein	beta	(TRAPB)
MannoseP_isomer	PF01050.18	gi|284162132|ref|YP_003400755.1|	-	1e-64	217.0	0.5	2e-64	216.1	0.5	1.5	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
NTP_transferase	PF00483.23	gi|284162132|ref|YP_003400755.1|	-	1.4e-55	188.6	0.0	2.5e-55	187.7	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyl	transferase
Cupin_2	PF07883.11	gi|284162132|ref|YP_003400755.1|	-	1.5e-13	50.3	0.0	3.7e-13	49.0	0.0	1.7	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|284162132|ref|YP_003400755.1|	-	7e-08	33.0	0.0	1.6e-07	31.8	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Cupin_3	PF05899.12	gi|284162132|ref|YP_003400755.1|	-	0.00017	21.2	0.0	0.00042	19.9	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
AraC_binding	PF02311.19	gi|284162132|ref|YP_003400755.1|	-	0.00073	19.4	0.0	0.0016	18.4	0.0	1.5	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
CENP-C_C	PF11699.8	gi|284162132|ref|YP_003400755.1|	-	0.0032	17.7	0.0	0.0069	16.6	0.0	1.5	1	0	0	1	1	1	1	Mif2/CENP-C	like
IspD	PF01128.19	gi|284162132|ref|YP_003400755.1|	-	0.043	13.5	0.0	0.07	12.9	0.0	1.3	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
BCS1_N	PF08740.11	gi|284162132|ref|YP_003400755.1|	-	0.084	12.8	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	BCS1	N	terminal
Glyco_hydro_130	PF04041.13	gi|284162133|ref|YP_003400756.1|	-	1.4e-88	296.9	1.2	1.6e-88	296.7	1.2	1.0	1	0	0	1	1	1	1	beta-1,4-mannooligosaccharide	phosphorylase
PmbA_TldD	PF01523.16	gi|284162134|ref|YP_003400757.1|	-	4.8e-61	207.0	1.7	6.8e-61	206.5	1.7	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Ribosomal_S13	PF00416.22	gi|284162135|ref|YP_003400758.1|	-	4.7e-42	143.4	0.2	5.4e-42	143.2	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
HHH_5	PF14520.6	gi|284162135|ref|YP_003400758.1|	-	0.0043	17.6	0.3	0.0085	16.7	0.3	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
S4	PF01479.25	gi|284162136|ref|YP_003400759.1|	-	2.4e-18	65.6	0.2	2.4e-18	65.6	0.2	2.1	3	0	0	3	3	3	1	S4	domain
Ribosomal_S4	PF00163.19	gi|284162136|ref|YP_003400759.1|	-	1.5e-06	29.0	0.5	2.5e-06	28.3	0.2	1.6	1	1	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.19	gi|284162137|ref|YP_003400760.1|	-	3.1e-46	156.3	2.7	3.9e-46	156.0	2.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S11
Pilus_CpaD	PF09476.10	gi|284162137|ref|YP_003400760.1|	-	0.046	13.5	0.2	0.057	13.1	0.2	1.2	1	0	0	1	1	1	0	Pilus	biogenesis	CpaD	protein	(pilus_cpaD)
RNA_pol_A_bac	PF01000.26	gi|284162138|ref|YP_003400761.1|	-	6.4e-32	110.3	0.1	1.1e-30	106.3	0.0	2.1	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|284162138|ref|YP_003400761.1|	-	9.4e-13	47.4	0.0	1.5e-12	46.8	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4	PF00037.27	gi|284162138|ref|YP_003400761.1|	-	6.4e-09	35.3	15.9	5.9e-06	25.9	3.3	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284162138|ref|YP_003400761.1|	-	8.2e-07	29.1	10.8	8.2e-07	29.1	10.8	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162138|ref|YP_003400761.1|	-	1.4e-06	29.1	10.4	0.002	19.0	0.8	3.0	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|284162138|ref|YP_003400761.1|	-	2.1e-06	27.5	24.7	0.0003	20.7	4.1	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162138|ref|YP_003400761.1|	-	4e-06	26.8	10.8	4e-06	26.8	10.8	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162138|ref|YP_003400761.1|	-	9.7e-06	26.1	27.2	6.7e-05	23.4	14.3	3.0	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162138|ref|YP_003400761.1|	-	0.00021	21.2	4.5	0.00021	21.2	4.5	3.3	3	1	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|284162138|ref|YP_003400761.1|	-	0.00073	20.0	12.7	0.0056	17.2	0.5	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162138|ref|YP_003400761.1|	-	0.00087	19.6	2.6	0.00087	19.6	2.6	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|284162138|ref|YP_003400761.1|	-	0.042	14.8	5.1	0.042	14.8	5.1	3.0	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284162138|ref|YP_003400761.1|	-	0.12	12.8	19.6	0.42	11.1	1.3	2.7	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284162138|ref|YP_003400761.1|	-	0.2	12.2	8.7	0.32	11.6	1.8	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284162138|ref|YP_003400761.1|	-	0.31	11.3	11.4	0.89	9.8	11.4	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162138|ref|YP_003400761.1|	-	0.74	10.0	22.5	0.22	11.7	2.7	2.8	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Pilin_N	PF07790.11	gi|284162139|ref|YP_003400762.1|	-	0.0089	16.9	0.0	0.017	16.0	0.0	1.4	1	0	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
DUF4115	PF13464.6	gi|284162139|ref|YP_003400762.1|	-	0.091	13.0	0.0	0.86	9.8	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4115)
IF3_C	PF00707.22	gi|284162139|ref|YP_003400762.1|	-	0.11	12.5	0.0	19	5.3	0.0	2.2	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	C-terminal	domain
Metallophos_2	PF12850.7	gi|284162140|ref|YP_003400763.1|	-	2.7e-29	102.5	0.0	3.4e-29	102.2	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|284162140|ref|YP_003400763.1|	-	7.1e-12	46.2	1.5	8.4e-12	46.0	1.5	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
TP6A_N	PF04406.14	gi|284162141|ref|YP_003400764.1|	-	2.9e-18	65.6	0.4	1.4e-17	63.5	0.4	2.0	2	0	0	2	2	2	1	Type	IIB	DNA	topoisomerase
Radical_SAM	PF04055.21	gi|284162142|ref|YP_003400765.1|	-	2.5e-11	44.2	0.8	3.4e-10	40.5	0.2	2.7	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284162142|ref|YP_003400765.1|	-	2.3e-05	24.5	0.0	6e-05	23.2	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|284162142|ref|YP_003400765.1|	-	9.3e-05	22.7	0.0	0.00018	21.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
NIF3	PF01784.18	gi|284162143|ref|YP_003400766.1|	-	3.6e-61	206.9	0.0	4.3e-61	206.7	0.0	1.0	1	0	0	1	1	1	1	NIF3	(NGG1p	interacting	factor	3)
Radical_SAM	PF04055.21	gi|284162144|ref|YP_003400767.1|	-	1.8e-06	28.4	0.8	3.4e-06	27.5	0.8	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284162144|ref|YP_003400767.1|	-	0.0012	19.0	0.1	0.0038	17.4	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|284162144|ref|YP_003400767.1|	-	0.0043	17.3	0.1	0.023	15.0	0.0	2.1	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
SRP54	PF00448.22	gi|284162145|ref|YP_003400768.1|	-	6.1e-76	254.4	0.9	1.2e-75	253.5	0.9	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|284162145|ref|YP_003400768.1|	-	2.9e-29	101.6	2.5	2.9e-29	101.6	2.5	2.6	3	0	0	3	3	1	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|284162145|ref|YP_003400768.1|	-	1.9e-17	63.2	5.4	1.9e-17	63.2	5.4	3.3	4	1	0	4	4	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.23	gi|284162145|ref|YP_003400768.1|	-	9.4e-09	35.4	0.0	7e-08	32.6	0.0	2.6	2	1	0	2	2	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.19	gi|284162145|ref|YP_003400768.1|	-	1.6e-06	27.8	2.8	4.6e-05	23.1	2.8	2.6	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
6PF2K	PF01591.18	gi|284162145|ref|YP_003400768.1|	-	2.1e-05	23.9	0.2	0.00022	20.6	0.1	2.4	1	1	1	2	2	2	1	6-phosphofructo-2-kinase
AAA_30	PF13604.6	gi|284162145|ref|YP_003400768.1|	-	9.1e-05	22.3	0.2	0.00025	20.8	0.2	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|284162145|ref|YP_003400768.1|	-	0.00017	21.3	1.4	0.00035	20.4	0.6	2.0	2	1	0	2	2	1	1	AAA	domain
AAA_33	PF13671.6	gi|284162145|ref|YP_003400768.1|	-	0.0003	21.0	0.0	0.00056	20.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284162145|ref|YP_003400768.1|	-	0.00034	20.9	0.0	0.0011	19.2	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|284162145|ref|YP_003400768.1|	-	0.0005	20.6	0.0	0.0017	18.9	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|284162145|ref|YP_003400768.1|	-	0.0012	17.9	0.0	0.017	14.1	0.0	2.5	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
MobB	PF03205.14	gi|284162145|ref|YP_003400768.1|	-	0.0016	18.3	0.9	0.011	15.6	0.9	2.4	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ResIII	PF04851.15	gi|284162145|ref|YP_003400768.1|	-	0.0016	18.4	0.3	0.0043	17.1	0.3	1.7	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.6	gi|284162145|ref|YP_003400768.1|	-	0.0019	18.6	0.1	0.0053	17.2	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
G-alpha	PF00503.20	gi|284162145|ref|YP_003400768.1|	-	0.0025	17.0	0.0	0.0051	16.0	0.0	1.7	1	1	0	1	1	1	1	G-protein	alpha	subunit
GTP_EFTU	PF00009.27	gi|284162145|ref|YP_003400768.1|	-	0.0027	17.3	0.5	0.014	15.0	0.1	2.3	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
PduV-EutP	PF10662.9	gi|284162145|ref|YP_003400768.1|	-	0.0051	16.6	0.4	0.27	11.0	0.1	2.8	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_19	PF13245.6	gi|284162145|ref|YP_003400768.1|	-	0.0052	17.1	0.6	0.21	11.9	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|284162145|ref|YP_003400768.1|	-	0.0057	15.9	0.6	0.014	14.7	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
APS_kinase	PF01583.20	gi|284162145|ref|YP_003400768.1|	-	0.0069	16.3	0.0	0.014	15.3	0.0	1.6	1	0	0	1	1	1	1	Adenylylsulphate	kinase
KTI12	PF08433.10	gi|284162145|ref|YP_003400768.1|	-	0.0074	15.8	1.8	0.011	15.3	0.0	2.1	3	0	0	3	3	3	1	Chromatin	associated	protein	KTI12
ATP_bind_1	PF03029.17	gi|284162145|ref|YP_003400768.1|	-	0.0077	16.0	0.2	0.033	14.0	0.2	2.2	1	1	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_15	PF13175.6	gi|284162145|ref|YP_003400768.1|	-	0.011	15.5	0.5	0.042	13.5	0.5	2.1	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_28	PF13521.6	gi|284162145|ref|YP_003400768.1|	-	0.012	15.9	0.1	0.033	14.5	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_8	PF12780.7	gi|284162145|ref|YP_003400768.1|	-	0.013	14.8	0.0	0.16	11.3	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region	D4
MMR_HSR1	PF01926.23	gi|284162145|ref|YP_003400768.1|	-	0.014	15.4	0.6	0.13	12.3	0.6	2.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_17	PF13207.6	gi|284162145|ref|YP_003400768.1|	-	0.019	15.4	0.4	0.019	15.4	0.4	2.9	3	1	0	3	3	2	0	AAA	domain
AAA_25	PF13481.6	gi|284162145|ref|YP_003400768.1|	-	0.02	14.5	2.2	4.1	6.9	0.2	2.9	2	1	0	2	2	2	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|284162145|ref|YP_003400768.1|	-	0.026	14.2	0.2	0.026	14.2	0.2	2.5	4	1	1	5	5	2	0	Thymidylate	kinase
TrwB_AAD_bind	PF10412.9	gi|284162145|ref|YP_003400768.1|	-	0.026	13.4	0.0	0.061	12.2	0.0	1.6	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
SRPRB	PF09439.10	gi|284162145|ref|YP_003400768.1|	-	0.029	13.8	1.9	3	7.3	1.9	2.5	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
MipZ	PF09140.11	gi|284162145|ref|YP_003400768.1|	-	0.049	12.9	0.3	2.4	7.4	0.3	2.4	1	1	0	1	1	1	0	ATPase	MipZ
NTPase_1	PF03266.15	gi|284162145|ref|YP_003400768.1|	-	0.056	13.4	4.1	0.24	11.3	0.1	2.8	3	0	0	3	3	2	0	NTPase
DUF1611	PF07755.11	gi|284162145|ref|YP_003400768.1|	-	0.059	12.7	1.1	0.37	10.0	0.6	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
AAA	PF00004.29	gi|284162145|ref|YP_003400768.1|	-	0.062	13.7	1.4	0.62	10.5	0.2	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF815	PF05673.13	gi|284162145|ref|YP_003400768.1|	-	0.095	11.8	0.3	2.3	7.3	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_5	PF07728.14	gi|284162145|ref|YP_003400768.1|	-	0.097	12.7	0.0	0.38	10.7	0.0	2.1	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Arf	PF00025.21	gi|284162145|ref|YP_003400768.1|	-	0.1	12.1	1.0	0.2	11.1	0.2	1.9	2	0	0	2	2	1	0	ADP-ribosylation	factor	family
AAA_31	PF13614.6	gi|284162145|ref|YP_003400768.1|	-	0.13	12.2	10.4	0.53	10.2	0.3	3.3	3	1	1	4	4	4	0	AAA	domain
AAA_26	PF13500.6	gi|284162145|ref|YP_003400768.1|	-	0.16	11.7	1.0	0.69	9.7	1.1	2.1	1	1	0	1	1	1	0	AAA	domain
LpxK	PF02606.14	gi|284162145|ref|YP_003400768.1|	-	0.23	10.5	1.1	0.3	10.1	0.2	1.6	2	0	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
UvrD-helicase	PF00580.21	gi|284162145|ref|YP_003400768.1|	-	0.81	9.1	3.8	0.89	9.0	1.0	2.4	2	1	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
CbiA	PF01656.23	gi|284162146|ref|YP_003400769.1|	-	6.1e-15	55.4	0.0	1.6e-14	54.0	0.0	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|284162146|ref|YP_003400769.1|	-	7.5e-10	38.7	0.0	3.3e-09	36.6	0.0	2.0	3	0	0	3	3	2	1	NUBPL	iron-transfer	P-loop	NTPase
CBP_BcsQ	PF06564.12	gi|284162146|ref|YP_003400769.1|	-	2.3e-08	33.8	0.0	0.0008	19.0	0.0	2.1	2	0	0	2	2	2	2	Cellulose	biosynthesis	protein	BcsQ
AAA_31	PF13614.6	gi|284162146|ref|YP_003400769.1|	-	2.1e-07	31.0	0.0	3.3e-07	30.4	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.20	gi|284162146|ref|YP_003400769.1|	-	3.1e-06	27.2	0.2	5.6e-06	26.3	0.2	1.6	1	1	0	1	1	1	1	Adenylylsulphate	kinase
MipZ	PF09140.11	gi|284162146|ref|YP_003400769.1|	-	5.2e-06	25.9	0.0	1.1e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.18	gi|284162146|ref|YP_003400769.1|	-	9.4e-06	25.3	0.2	3.4e-05	23.4	0.1	1.9	1	1	1	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|284162146|ref|YP_003400769.1|	-	1e-05	24.9	0.1	2.3e-05	23.7	0.1	1.6	1	0	0	1	1	1	1	Anion-transporting	ATPase
DUF87	PF01935.17	gi|284162146|ref|YP_003400769.1|	-	5.8e-05	23.3	0.0	0.00019	21.6	0.0	1.9	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
AAA_16	PF13191.6	gi|284162146|ref|YP_003400769.1|	-	0.00072	20.0	0.0	0.0031	17.9	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
CLP1_P	PF16575.5	gi|284162146|ref|YP_003400769.1|	-	0.0014	18.5	0.0	0.0031	17.3	0.0	1.6	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
KTI12	PF08433.10	gi|284162146|ref|YP_003400769.1|	-	0.0014	18.1	0.0	0.0043	16.5	0.0	1.8	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
LpxK	PF02606.14	gi|284162146|ref|YP_003400769.1|	-	0.0019	17.3	0.0	0.22	10.6	0.1	2.1	2	0	0	2	2	2	1	Tetraacyldisaccharide-1-P	4'-kinase
Zeta_toxin	PF06414.12	gi|284162146|ref|YP_003400769.1|	-	0.0038	16.5	0.0	0.0068	15.7	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
MeaB	PF03308.16	gi|284162146|ref|YP_003400769.1|	-	0.0049	15.9	0.1	0.0076	15.3	0.1	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SRP54	PF00448.22	gi|284162146|ref|YP_003400769.1|	-	0.006	16.2	0.3	0.027	14.1	0.1	2.0	2	1	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.17	gi|284162146|ref|YP_003400769.1|	-	0.0061	16.3	0.1	0.11	12.2	0.0	2.4	2	1	1	3	3	3	1	Thymidylate	kinase
AAA_24	PF13479.6	gi|284162146|ref|YP_003400769.1|	-	0.011	15.5	0.0	0.024	14.3	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
ATPase	PF06745.13	gi|284162146|ref|YP_003400769.1|	-	0.023	14.0	0.0	0.15	11.4	0.0	2.0	1	1	0	1	1	1	0	KaiC
AAA_25	PF13481.6	gi|284162146|ref|YP_003400769.1|	-	0.025	14.2	0.0	0.053	13.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|284162146|ref|YP_003400769.1|	-	0.036	14.6	0.0	0.075	13.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|284162146|ref|YP_003400769.1|	-	0.043	13.7	0.1	0.071	13.0	0.1	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.15	gi|284162146|ref|YP_003400769.1|	-	0.045	13.7	0.1	0.1	12.5	0.1	1.6	1	0	0	1	1	1	0	NTPase
IstB_IS21	PF01695.17	gi|284162146|ref|YP_003400769.1|	-	0.055	13.2	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Gtr1_RagA	PF04670.12	gi|284162146|ref|YP_003400769.1|	-	0.071	12.5	0.5	0.4	10.0	0.0	2.1	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
VirC1	PF07015.11	gi|284162146|ref|YP_003400769.1|	-	0.074	12.3	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
ATP_bind_1	PF03029.17	gi|284162146|ref|YP_003400769.1|	-	0.076	12.8	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
ABC_tran	PF00005.27	gi|284162146|ref|YP_003400769.1|	-	0.078	13.5	0.0	0.13	12.7	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
5_nucleotid_C	PF02872.18	gi|284162146|ref|YP_003400769.1|	-	0.084	13.1	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	5'-nucleotidase,	C-terminal	domain
MMR_HSR1	PF01926.23	gi|284162146|ref|YP_003400769.1|	-	0.086	12.9	0.1	7.8	6.6	0.0	2.3	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
PRK	PF00485.18	gi|284162146|ref|YP_003400769.1|	-	0.088	12.5	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_33	PF13671.6	gi|284162146|ref|YP_003400769.1|	-	0.098	12.8	0.0	0.16	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284162146|ref|YP_003400769.1|	-	0.098	12.4	0.1	0.24	11.1	0.1	1.5	2	0	0	2	2	1	0	AAA	domain
AAA_10	PF12846.7	gi|284162146|ref|YP_003400769.1|	-	0.1	11.5	0.1	0.36	9.7	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
YjeF_N	PF03853.15	gi|284162146|ref|YP_003400769.1|	-	0.11	12.4	0.0	0.24	11.3	0.0	1.6	1	1	0	1	1	1	0	YjeF-related	protein	N-terminus
TrkA_N	PF02254.18	gi|284162146|ref|YP_003400769.1|	-	0.12	12.6	0.1	3.9	7.7	0.0	2.3	2	1	0	2	2	2	0	TrkA-N	domain
AAA	PF00004.29	gi|284162146|ref|YP_003400769.1|	-	0.14	12.6	0.0	0.32	11.4	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SSE	PF00437.20	gi|284162146|ref|YP_003400769.1|	-	0.19	10.8	0.0	0.3	10.1	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|284162146|ref|YP_003400769.1|	-	0.21	11.4	1.1	0.49	10.2	0.8	1.7	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
cobW	PF02492.19	gi|284162146|ref|YP_003400769.1|	-	0.24	11.0	1.1	5.1	6.6	0.0	2.5	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AMP-binding_C_2	PF14535.6	gi|284162147|ref|YP_003400770.1|	-	5.6e-33	113.1	0.2	1.1e-32	112.2	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|284162147|ref|YP_003400770.1|	-	8.2e-22	77.4	0.0	1.7e-20	73.0	0.0	2.0	1	1	0	1	1	1	1	AMP-binding	enzyme
GH3	PF03321.13	gi|284162147|ref|YP_003400770.1|	-	1.8e-06	27.1	0.0	0.00019	20.4	0.0	2.1	2	0	0	2	2	2	2	GH3	auxin-responsive	promoter
Cation_efflux	PF01545.21	gi|284162148|ref|YP_003400771.1|	-	7.6e-45	153.1	16.9	1.2e-44	152.5	16.9	1.2	1	0	0	1	1	1	1	Cation	efflux	family
Nitro_FeMo-Co	PF02579.17	gi|284162148|ref|YP_003400771.1|	-	5.8e-16	58.6	0.2	3.5e-15	56.1	0.0	2.2	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
ZT_dimer	PF16916.5	gi|284162148|ref|YP_003400771.1|	-	1e-06	28.8	3.1	2.3e-06	27.6	3.1	1.6	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
PAP2	PF01569.21	gi|284162148|ref|YP_003400771.1|	-	3.7	7.3	9.2	7.4	6.3	0.9	2.8	2	1	0	2	2	2	0	PAP2	superfamily
AMP-binding	PF00501.28	gi|284162149|ref|YP_003400772.1|	-	2.2e-111	372.5	0.0	2.5e-111	372.3	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|284162149|ref|YP_003400772.1|	-	1.5e-15	57.9	1.2	8.3e-15	55.5	0.4	2.7	3	0	0	3	3	3	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|284162150|ref|YP_003400773.1|	-	4.8e-62	209.9	0.0	6.2e-62	209.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|284162150|ref|YP_003400773.1|	-	3.4e-24	85.6	0.2	6.3e-24	84.8	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Atu4866	PF11512.8	gi|284162150|ref|YP_003400773.1|	-	0.32	11.4	2.3	0.69	10.3	2.3	1.5	1	0	0	1	1	1	0	Agrobacterium	tumefaciens	protein	Atu4866
AdoMet_Synthase	PF01941.19	gi|284162151|ref|YP_003400774.1|	-	1.2e-179	597.2	3.2	1.4e-179	597.0	3.2	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
HisG	PF01634.18	gi|284162152|ref|YP_003400775.1|	-	7e-54	182.1	0.9	9.4e-54	181.7	0.9	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.11	gi|284162152|ref|YP_003400775.1|	-	5.9e-27	93.6	0.2	1.1e-26	92.8	0.2	1.5	1	0	0	1	1	1	1	HisG,	C-terminal	domain
NMT1	PF09084.11	gi|284162152|ref|YP_003400775.1|	-	4.2e-08	33.4	0.2	0.00049	20.1	0.1	2.3	1	1	1	2	2	2	2	NMT1/THI5	like
Phosphonate-bd	PF12974.7	gi|284162152|ref|YP_003400775.1|	-	0.015	14.9	0.0	0.041	13.5	0.1	1.6	1	1	1	2	2	2	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.20	gi|284162152|ref|YP_003400775.1|	-	0.051	13.0	0.0	0.068	12.6	0.0	1.3	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
Memo	PF01875.17	gi|284162154|ref|YP_003400777.1|	-	1.5e-80	270.3	0.1	1.6e-80	270.1	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
TniB	PF05621.11	gi|284162154|ref|YP_003400777.1|	-	0.024	14.0	0.0	4.8	6.5	0.0	2.3	1	1	1	2	2	2	0	Bacterial	TniB	protein
LigB	PF02900.18	gi|284162154|ref|YP_003400777.1|	-	0.042	12.9	0.0	0.052	12.6	0.0	1.3	1	0	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
TPR_12	PF13424.6	gi|284162155|ref|YP_003400778.1|	-	5.5e-24	84.3	13.5	8.2e-11	42.0	0.4	5.9	4	3	0	5	5	5	3	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|284162155|ref|YP_003400778.1|	-	5.3e-21	73.0	24.6	3.7e-06	26.6	0.6	8.9	9	0	0	9	9	9	4	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|284162155|ref|YP_003400778.1|	-	1.1e-19	68.9	23.9	5.5e-05	23.1	0.6	7.9	8	0	0	8	8	7	5	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|284162155|ref|YP_003400778.1|	-	7.8e-19	66.6	32.8	6.6e-06	25.7	0.9	9.1	9	0	0	9	9	9	4	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|284162155|ref|YP_003400778.1|	-	1.8e-17	62.6	14.9	4.2e-06	26.4	0.2	6.7	6	0	0	6	6	6	3	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|284162155|ref|YP_003400778.1|	-	1.6e-15	55.9	20.2	7.4e-05	22.5	0.1	7.1	8	0	0	8	8	6	4	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|284162155|ref|YP_003400778.1|	-	1e-12	48.5	0.4	0.0011	19.5	0.0	4.7	4	1	0	4	4	4	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|284162155|ref|YP_003400778.1|	-	2.6e-10	40.6	9.2	0.0036	17.8	0.0	5.4	4	2	3	7	7	6	3	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|284162155|ref|YP_003400778.1|	-	7.9e-08	32.5	1.1	1	10.4	0.0	6.3	5	2	2	7	7	4	1	Tetratricopeptide	repeat
ANAPC5	PF12862.7	gi|284162155|ref|YP_003400778.1|	-	9.2e-08	32.1	1.7	0.015	15.3	0.3	4.0	1	1	2	3	3	3	2	Anaphase-promoting	complex	subunit	5
TPR_MalT	PF17874.1	gi|284162155|ref|YP_003400778.1|	-	4.2e-06	26.4	0.0	0.00076	18.9	0.0	2.1	1	1	1	2	2	2	1	MalT-like	TPR	region
RPN6_N	PF18055.1	gi|284162155|ref|YP_003400778.1|	-	1.6e-05	25.2	5.0	0.073	13.4	0.2	3.7	2	1	2	4	4	4	2	26S	proteasome	regulatory	subunit	RPN6	N-terminal	domain
SNAP	PF14938.6	gi|284162155|ref|YP_003400778.1|	-	2.1e-05	24.1	9.7	0.00074	19.0	1.1	3.4	2	1	0	3	3	3	2	Soluble	NSF	attachment	protein,	SNAP
DUF2989	PF11207.8	gi|284162155|ref|YP_003400778.1|	-	0.00021	21.1	5.1	0.075	12.8	0.2	3.4	1	1	1	3	3	3	2	Protein	of	unknown	function	(DUF2989)
RPN7	PF10602.9	gi|284162155|ref|YP_003400778.1|	-	0.0011	18.7	1.8	0.0011	18.7	1.8	3.9	3	1	1	4	4	4	1	26S	proteasome	subunit	RPN7
ANAPC3	PF12895.7	gi|284162155|ref|YP_003400778.1|	-	0.0012	19.1	17.0	0.022	15.0	3.9	5.3	1	1	5	6	6	6	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_17	PF13431.6	gi|284162155|ref|YP_003400778.1|	-	0.0017	18.6	12.5	3.6	8.2	0.0	7.0	7	0	0	7	7	7	1	Tetratricopeptide	repeat
TPR_21	PF09976.9	gi|284162155|ref|YP_003400778.1|	-	0.0019	17.9	3.8	0.0022	17.7	2.0	2.1	2	1	0	2	2	1	1	Tetratricopeptide	repeat-like	domain
TPR_6	PF13174.6	gi|284162155|ref|YP_003400778.1|	-	0.0045	17.5	11.5	12	6.8	0.0	6.3	7	0	0	7	7	5	0	Tetratricopeptide	repeat
Casc1_N	PF15927.5	gi|284162155|ref|YP_003400778.1|	-	0.0056	16.4	4.2	0.14	11.8	0.6	2.8	2	0	0	2	2	2	1	Cancer	susceptibility	candidate	1	N-terminus
AP_endonuc_2	PF01261.24	gi|284162155|ref|YP_003400778.1|	-	0.01	15.3	0.0	1.9	7.9	0.0	2.6	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
AHD	PF17793.1	gi|284162155|ref|YP_003400778.1|	-	0.052	13.4	0.0	1.4	8.8	0.0	2.6	2	0	0	2	2	2	0	ANC1	homology	domain	(AHD)
DUF2225	PF09986.9	gi|284162155|ref|YP_003400778.1|	-	0.072	12.8	12.0	0.4	10.4	0.6	3.2	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
PPR	PF01535.20	gi|284162155|ref|YP_003400778.1|	-	0.16	12.3	8.6	4.3	7.8	0.0	6.0	7	0	0	7	7	4	0	PPR	repeat
Sel1	PF08238.12	gi|284162155|ref|YP_003400778.1|	-	0.23	12.2	14.9	7.3	7.4	0.2	6.2	6	1	1	7	7	5	0	Sel1	repeat
Transcrip_act	PF04949.13	gi|284162155|ref|YP_003400778.1|	-	0.3	11.0	8.3	0.059	13.3	2.1	2.8	2	1	1	3	3	2	0	Transcriptional	activator
SPOB_a	PF14689.6	gi|284162155|ref|YP_003400778.1|	-	1.4	8.7	11.9	26	4.6	0.1	5.6	5	0	0	5	5	5	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
PP2C_C	PF07830.13	gi|284162155|ref|YP_003400778.1|	-	2.2	8.8	4.4	3.6	8.1	0.1	3.2	2	1	1	3	3	3	0	Protein	serine/threonine	phosphatase	2C,	C-terminal	domain
AvrM-A	PF18241.1	gi|284162155|ref|YP_003400778.1|	-	4.2	7.8	7.3	5.3	7.5	0.2	3.5	3	0	0	3	3	3	0	Flax-rust	effector	AvrM-A
Intein_splicing	PF14890.6	gi|284162156|ref|YP_003400779.1|	-	1.1e-19	70.7	0.4	1.8e-18	66.8	0.1	2.8	3	0	0	3	3	3	1	Intein	splicing	domain
Radical_SAM	PF04055.21	gi|284162156|ref|YP_003400779.1|	-	1.6e-15	57.9	9.1	3.1e-13	50.4	0.0	3.7	4	0	0	4	4	4	2	Radical	SAM	superfamily
LAGLIDADG_3	PF14528.6	gi|284162156|ref|YP_003400779.1|	-	1.5e-14	54.1	3.1	9.6e-12	45.1	0.2	3.1	3	0	0	3	3	3	2	LAGLIDADG-like	domain
Hom_end	PF05204.14	gi|284162156|ref|YP_003400779.1|	-	1.7e-05	25.0	0.1	0.00015	21.9	0.0	2.2	2	0	0	2	2	2	1	Homing	endonuclease
Fer4_12	PF13353.6	gi|284162156|ref|YP_003400779.1|	-	0.0093	16.2	0.5	0.24	11.6	0.0	2.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Phage_XkdX	PF09693.10	gi|284162156|ref|YP_003400779.1|	-	0.0097	15.9	1.8	0.03	14.4	0.2	2.8	2	0	0	2	2	2	1	Phage	uncharacterised	protein	(Phage_XkdX)
Hint	PF01079.20	gi|284162156|ref|YP_003400779.1|	-	0.2	11.1	0.0	0.37	10.2	0.0	1.4	1	0	0	1	1	1	0	Hint	module
Peptidase_M20	PF01546.28	gi|284162157|ref|YP_003400780.1|	-	1.8e-17	63.7	0.7	3.9e-16	59.4	0.7	2.0	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|284162157|ref|YP_003400780.1|	-	1.5e-13	50.6	0.0	3e-13	49.6	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|284162157|ref|YP_003400780.1|	-	0.00036	20.3	0.0	0.0013	18.5	0.0	1.7	1	1	0	1	1	1	1	Peptidase	family	M28
Acetyltransf_1	PF00583.25	gi|284162158|ref|YP_003400781.1|	-	1.9e-25	89.4	0.4	2.2e-25	89.2	0.4	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|284162158|ref|YP_003400781.1|	-	1.2e-17	64.1	0.1	1.8e-17	63.5	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|284162158|ref|YP_003400781.1|	-	7.6e-16	58.2	0.0	9.1e-16	57.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|284162158|ref|YP_003400781.1|	-	1.7e-10	41.0	0.0	6.2e-10	39.2	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|284162158|ref|YP_003400781.1|	-	7.8e-10	38.7	0.0	1.2e-09	38.1	0.0	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
FR47	PF08445.10	gi|284162158|ref|YP_003400781.1|	-	5.9e-09	35.8	0.0	1e-08	35.0	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.7	gi|284162158|ref|YP_003400781.1|	-	6.5e-08	33.3	0.1	7.4e-08	33.2	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|284162158|ref|YP_003400781.1|	-	0.00082	19.1	0.0	0.002	17.8	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|284162158|ref|YP_003400781.1|	-	0.0011	19.1	0.0	0.0014	18.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|284162158|ref|YP_003400781.1|	-	0.0014	18.1	0.0	0.0026	17.2	0.0	1.6	1	1	0	1	1	1	1	Putative	acetyl-transferase
GNAT_acetyltran	PF12746.7	gi|284162158|ref|YP_003400781.1|	-	0.013	15.1	0.0	0.017	14.7	0.0	1.2	1	0	0	1	1	1	0	GNAT	acetyltransferase
Acetyltransf_6	PF13480.7	gi|284162158|ref|YP_003400781.1|	-	0.018	15.2	0.0	0.025	14.7	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
MutS_V	PF00488.21	gi|284162159|ref|YP_003400782.1|	-	4.6e-75	251.8	0.2	1.2e-74	250.5	0.2	1.7	1	0	0	1	1	1	1	MutS	domain	V
MutS_III	PF05192.18	gi|284162159|ref|YP_003400782.1|	-	7.8e-48	163.2	1.7	7.8e-48	163.2	1.7	2.3	2	0	0	2	2	2	1	MutS	domain	III
MutS_I	PF01624.20	gi|284162159|ref|YP_003400782.1|	-	1.5e-44	150.9	0.0	3.1e-44	149.8	0.0	1.6	1	0	0	1	1	1	1	MutS	domain	I
MutS_IV	PF05190.18	gi|284162159|ref|YP_003400782.1|	-	4.1e-26	91.2	1.1	4.1e-26	91.2	1.1	3.2	4	0	0	4	4	3	1	MutS	family	domain	IV
MutS_II	PF05188.17	gi|284162159|ref|YP_003400782.1|	-	5e-19	68.9	0.6	5e-19	68.9	0.6	2.5	3	0	0	3	3	3	1	MutS	domain	II
Helo_like_N	PF17111.5	gi|284162159|ref|YP_003400782.1|	-	0.0089	15.4	9.2	0.22	10.9	0.1	3.1	1	1	2	3	3	3	2	Fungal	N-terminal	domain	of	STAND	proteins
AAA_14	PF13173.6	gi|284162159|ref|YP_003400782.1|	-	0.013	15.6	0.5	0.17	11.9	0.0	3.1	2	1	0	2	2	2	0	AAA	domain
TTD	PF12148.8	gi|284162159|ref|YP_003400782.1|	-	0.031	14.1	0.8	3.3	7.5	0.1	2.4	2	0	0	2	2	2	0	Tandem	tudor	domain	within	UHRF1
AAA_27	PF13514.6	gi|284162159|ref|YP_003400782.1|	-	0.068	12.8	0.0	0.19	11.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|284162159|ref|YP_003400782.1|	-	0.19	11.5	0.0	0.45	10.3	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF3323	PF11796.8	gi|284162159|ref|YP_003400782.1|	-	0.33	10.8	1.5	0.96	9.3	1.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	N-terminus	(DUF3323)
AAA_23	PF13476.6	gi|284162159|ref|YP_003400782.1|	-	0.57	10.6	0.0	0.57	10.6	0.0	3.6	3	1	0	3	3	2	0	AAA	domain
Spectrin	PF00435.21	gi|284162159|ref|YP_003400782.1|	-	0.72	10.4	7.5	0.78	10.3	0.4	3.7	4	0	0	4	4	4	0	Spectrin	repeat
CorA	PF01544.18	gi|284162159|ref|YP_003400782.1|	-	1.4	8.2	8.3	0.74	9.1	4.2	2.5	2	0	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
TIR-like	PF10137.9	gi|284162160|ref|YP_003400783.1|	-	0.018	15.0	0.0	0.15	12.0	0.0	2.3	2	1	0	2	2	2	0	Predicted	nucleotide-binding	protein	containing	TIR-like	domain
AHJR-like	PF18743.1	gi|284162160|ref|YP_003400783.1|	-	0.03	13.9	0.0	0.053	13.1	0.0	1.4	1	0	0	1	1	1	0	REase_AHJR-like
Fae	PF08714.11	gi|284162161|ref|YP_003400784.1|	-	1.8e-72	242.5	0.4	2.7e-72	241.9	0.4	1.3	1	0	0	1	1	1	1	Formaldehyde-activating	enzyme	(Fae)
OMPdecase	PF00215.24	gi|284162161|ref|YP_003400784.1|	-	7.8e-20	71.4	1.5	3.3e-19	69.4	1.5	1.9	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.19	gi|284162161|ref|YP_003400784.1|	-	8.3e-06	25.3	0.2	2.2e-05	23.9	0.2	1.7	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
TMP-TENI	PF02581.17	gi|284162161|ref|YP_003400784.1|	-	0.00099	18.5	0.1	0.0019	17.6	0.1	1.4	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
QRPTase_C	PF01729.19	gi|284162161|ref|YP_003400784.1|	-	0.0022	17.8	0.2	0.004	17.0	0.2	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
IGPS	PF00218.21	gi|284162161|ref|YP_003400784.1|	-	0.0026	16.9	0.0	0.073	12.2	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
NanE	PF04131.14	gi|284162161|ref|YP_003400784.1|	-	0.0054	16.0	0.7	0.014	14.6	0.6	1.8	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IMPDH	PF00478.25	gi|284162161|ref|YP_003400784.1|	-	0.073	12.1	0.2	0.1	11.5	0.2	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
DHHA2	PF02833.14	gi|284162162|ref|YP_003400785.1|	-	3.8e-24	85.5	0.1	7.7e-24	84.5	0.1	1.5	1	0	0	1	1	1	1	DHHA2	domain
DHH	PF01368.20	gi|284162162|ref|YP_003400785.1|	-	1.4e-23	83.0	0.0	2.6e-23	82.1	0.0	1.4	1	0	0	1	1	1	1	DHH	family
DUF2100	PF09873.9	gi|284162162|ref|YP_003400785.1|	-	0.011	15.6	0.2	1.2	9.0	0.0	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
DUF5403	PF17395.2	gi|284162162|ref|YP_003400785.1|	-	0.042	14.1	0.0	0.18	12.1	0.0	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5403)
RibD_C	PF01872.17	gi|284162163|ref|YP_003400786.1|	-	1.8e-55	187.9	0.1	2e-55	187.7	0.1	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
MoCF_biosynth	PF00994.24	gi|284162164|ref|YP_003400787.1|	-	6.4e-36	123.2	0.2	8.1e-36	122.8	0.2	1.1	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
SOUL	PF04832.12	gi|284162164|ref|YP_003400787.1|	-	0.024	14.8	0.1	0.051	13.7	0.1	1.5	1	0	0	1	1	1	0	SOUL	heme-binding	protein
CinA_KH	PF18146.1	gi|284162164|ref|YP_003400787.1|	-	0.049	13.8	0.0	0.12	12.6	0.0	1.6	1	0	0	1	1	1	0	Damage-inducible	protein	CinA	KH	domain
IF-2B	PF01008.17	gi|284162165|ref|YP_003400788.1|	-	8.1e-28	97.4	0.0	9.2e-28	97.2	0.0	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
POR	PF01558.18	gi|284162166|ref|YP_003400789.1|	-	1.9e-40	138.8	0.0	2.3e-40	138.6	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.27	gi|284162167|ref|YP_003400790.1|	-	1.1e-15	56.7	21.3	3e-08	33.1	5.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162167|ref|YP_003400790.1|	-	5.4e-14	52.5	35.6	9.1e-09	35.8	13.4	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162167|ref|YP_003400790.1|	-	7.7e-14	51.6	12.9	9.4e-14	51.3	12.9	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162167|ref|YP_003400790.1|	-	1.7e-10	40.4	13.3	2.2e-05	24.3	3.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162167|ref|YP_003400790.1|	-	2.1e-10	40.2	19.9	3e-06	27.0	5.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284162167|ref|YP_003400790.1|	-	3.7e-08	34.2	12.2	0.00025	21.9	2.2	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|284162167|ref|YP_003400790.1|	-	6.3e-08	32.7	12.3	9e-08	32.2	12.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284162167|ref|YP_003400790.1|	-	4e-07	30.0	15.0	0.00066	19.8	2.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162167|ref|YP_003400790.1|	-	4.7e-06	27.0	7.6	0.003	18.0	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284162167|ref|YP_003400790.1|	-	2.1e-05	25.3	10.5	0.028	15.2	2.4	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162167|ref|YP_003400790.1|	-	4.2e-05	23.7	17.4	0.017	15.6	6.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284162167|ref|YP_003400790.1|	-	5.9e-05	23.5	12.3	0.0051	17.3	2.0	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|284162167|ref|YP_003400790.1|	-	0.00099	19.8	9.3	0.066	14.0	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|284162167|ref|YP_003400790.1|	-	0.0036	17.7	13.5	0.83	10.1	14.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162167|ref|YP_003400790.1|	-	2.9	9.0	20.5	0.76	10.9	4.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
ETF_QO	PF05187.13	gi|284162167|ref|YP_003400790.1|	-	3	8.0	7.4	3.9	7.7	3.8	2.1	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
MqsA_antitoxin	PF15731.5	gi|284162167|ref|YP_003400790.1|	-	3.1	7.9	7.4	5.3	7.1	7.6	1.3	1	1	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
POR_N	PF01855.19	gi|284162168|ref|YP_003400791.1|	-	4.6e-75	252.3	0.1	5.7e-75	252.0	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|284162168|ref|YP_003400791.1|	-	1.7e-25	89.2	0.0	3.4e-25	88.3	0.0	1.5	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
DUF1667	PF07892.11	gi|284162168|ref|YP_003400791.1|	-	0.12	12.4	0.0	21	5.2	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1667)
DUF4363	PF14276.6	gi|284162168|ref|YP_003400791.1|	-	0.15	12.2	0.0	0.48	10.6	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4363)
TPP_enzyme_C	PF02775.21	gi|284162169|ref|YP_003400792.1|	-	8.6e-25	87.3	0.0	1.2e-24	86.9	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Fer4	PF00037.27	gi|284162170|ref|YP_003400793.1|	-	1.7e-19	68.8	34.0	8.4e-08	31.7	3.7	5.4	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Pyr_redox_2	PF07992.14	gi|284162170|ref|YP_003400793.1|	-	2.6e-17	63.0	0.0	2.6e-16	59.7	0.0	2.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_7	PF12838.7	gi|284162170|ref|YP_003400793.1|	-	3.5e-11	43.5	35.6	5.3e-09	36.5	8.1	4.7	3	1	2	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162170|ref|YP_003400793.1|	-	2.3e-10	40.1	45.2	7.8e-05	22.6	2.4	5.4	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162170|ref|YP_003400793.1|	-	3.5e-10	39.8	32.7	1.4e-09	37.9	8.9	4.3	5	0	0	5	5	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162170|ref|YP_003400793.1|	-	1e-08	36.0	23.6	0.0022	18.9	0.5	5.0	5	0	0	5	5	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|284162170|ref|YP_003400793.1|	-	1.3e-08	34.9	34.4	1.7e-07	31.3	8.7	4.2	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
NAD_binding_8	PF13450.6	gi|284162170|ref|YP_003400793.1|	-	5.7e-08	32.9	0.0	1.3e-07	31.8	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_2	PF12797.7	gi|284162170|ref|YP_003400793.1|	-	1.7e-07	30.9	18.8	0.00022	21.1	1.1	5.3	6	0	0	6	6	4	3	4Fe-4S	binding	domain
FAD_oxidored	PF12831.7	gi|284162170|ref|YP_003400793.1|	-	1.9e-07	30.8	0.9	3.6e-07	29.9	0.9	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.27	gi|284162170|ref|YP_003400793.1|	-	8.8e-07	29.4	1.1	9.8e-06	26.0	1.0	2.7	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|284162170|ref|YP_003400793.1|	-	3.5e-06	26.4	1.1	6e-06	25.6	1.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_10	PF13237.6	gi|284162170|ref|YP_003400793.1|	-	4.1e-06	26.8	19.6	4.6e-05	23.4	10.9	4.5	3	2	2	5	5	5	3	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.19	gi|284162170|ref|YP_003400793.1|	-	6e-06	25.7	1.1	1e-05	25.0	1.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|284162170|ref|YP_003400793.1|	-	1.6e-05	24.7	0.4	5.7e-05	22.9	0.7	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Fer4_22	PF17179.4	gi|284162170|ref|YP_003400793.1|	-	2.5e-05	25.0	11.3	0.58	11.0	1.0	4.0	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|284162170|ref|YP_003400793.1|	-	7.9e-05	21.9	0.0	0.00015	21.0	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|284162170|ref|YP_003400793.1|	-	0.001	17.8	0.1	0.0076	15.0	0.4	2.0	2	0	0	2	2	2	1	HI0933-like	protein
Fer4_13	PF13370.6	gi|284162170|ref|YP_003400793.1|	-	0.0013	19.3	19.5	0.33	11.5	1.8	4.0	3	0	0	3	3	3	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|284162170|ref|YP_003400793.1|	-	0.0021	18.4	35.6	0.012	16.0	1.8	5.3	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Thi4	PF01946.17	gi|284162170|ref|YP_003400793.1|	-	0.0025	17.1	0.4	0.0069	15.6	0.3	1.7	1	1	0	1	1	1	1	Thi4	family
Pyr_redox_3	PF13738.6	gi|284162170|ref|YP_003400793.1|	-	0.0031	16.8	0.0	0.019	14.2	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|284162170|ref|YP_003400793.1|	-	0.0068	15.7	0.0	0.014	14.7	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_15	PF13459.6	gi|284162170|ref|YP_003400793.1|	-	0.0073	17.0	24.3	0.043	14.6	1.8	4.3	4	1	1	5	5	3	3	4Fe-4S	single	cluster	domain
Amino_oxidase	PF01593.24	gi|284162170|ref|YP_003400793.1|	-	0.012	14.9	0.0	0.027	13.8	0.0	1.5	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
Trp_halogenase	PF04820.14	gi|284162170|ref|YP_003400793.1|	-	0.2	10.5	0.7	0.37	9.6	0.7	1.4	1	0	0	1	1	1	0	Tryptophan	halogenase
Fer4_17	PF13534.6	gi|284162170|ref|YP_003400793.1|	-	2.4	8.8	37.4	0.6	10.7	10.8	4.9	3	2	3	6	6	6	0	4Fe-4S	dicluster	domain
Hormone_4	PF00220.17	gi|284162171|ref|YP_003400794.1|	-	0.2	11.7	3.8	1.2	9.3	1.7	2.7	2	1	0	2	2	2	0	Neurohypophysial	hormones,	N-terminal	Domain
ABC_tran	PF00005.27	gi|284162172|ref|YP_003400795.1|	-	5.1e-36	124.2	0.0	6.7e-36	123.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162172|ref|YP_003400795.1|	-	5.5e-13	49.4	1.8	4.8e-07	29.9	0.2	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|284162172|ref|YP_003400795.1|	-	1.2e-09	38.4	2.1	1.3e-07	31.7	0.2	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.19	gi|284162172|ref|YP_003400795.1|	-	1.3e-08	34.5	0.2	3.1e-07	30.1	0.2	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|284162172|ref|YP_003400795.1|	-	6.2e-08	33.4	0.0	1e-07	32.7	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|284162172|ref|YP_003400795.1|	-	8.1e-07	29.6	0.0	1.1e-06	29.1	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|284162172|ref|YP_003400795.1|	-	1.3e-06	28.1	0.0	2.4e-06	27.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_ATPase	PF09818.9	gi|284162172|ref|YP_003400795.1|	-	0.00013	20.9	0.4	0.19	10.5	0.0	2.8	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.6	gi|284162172|ref|YP_003400795.1|	-	0.00032	21.0	1.0	0.0036	17.6	1.0	2.0	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|284162172|ref|YP_003400795.1|	-	0.0016	18.4	1.3	0.71	9.8	0.1	2.2	2	0	0	2	2	2	2	NTPase
Zeta_toxin	PF06414.12	gi|284162172|ref|YP_003400795.1|	-	0.0016	17.8	0.0	0.0027	17.0	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
AAA_14	PF13173.6	gi|284162172|ref|YP_003400795.1|	-	0.0026	17.8	0.2	0.016	15.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
RNA12	PF10443.9	gi|284162172|ref|YP_003400795.1|	-	0.005	15.6	0.0	0.0074	15.1	0.0	1.2	1	0	0	1	1	1	1	RNA12	protein
AAA_30	PF13604.6	gi|284162172|ref|YP_003400795.1|	-	0.0051	16.6	0.1	0.014	15.1	0.0	1.8	2	1	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|284162172|ref|YP_003400795.1|	-	0.0074	16.2	0.2	0.019	14.9	0.1	1.7	1	1	1	2	2	2	1	Rad17	P-loop	domain
NB-ARC	PF00931.22	gi|284162172|ref|YP_003400795.1|	-	0.015	14.5	0.2	0.041	13.1	0.0	1.7	2	0	0	2	2	2	0	NB-ARC	domain
RsgA_GTPase	PF03193.16	gi|284162172|ref|YP_003400795.1|	-	0.015	15.2	0.0	0.031	14.2	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
NACHT	PF05729.12	gi|284162172|ref|YP_003400795.1|	-	0.018	15.0	0.1	0.072	13.0	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA	PF00004.29	gi|284162172|ref|YP_003400795.1|	-	0.018	15.5	0.1	0.17	12.3	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|284162172|ref|YP_003400795.1|	-	0.028	14.4	0.1	0.04	13.8	0.1	1.4	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
SbcCD_C	PF13558.6	gi|284162172|ref|YP_003400795.1|	-	0.028	14.6	0.0	0.47	10.7	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_19	PF13245.6	gi|284162172|ref|YP_003400795.1|	-	0.034	14.5	0.4	0.29	11.5	0.4	2.3	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|284162172|ref|YP_003400795.1|	-	0.035	13.5	0.0	0.093	12.1	0.0	1.6	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.6	gi|284162172|ref|YP_003400795.1|	-	0.036	14.2	0.0	0.1	12.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
HSM3_N	PF18795.1	gi|284162172|ref|YP_003400795.1|	-	0.045	13.2	0.1	0.07	12.5	0.1	1.3	1	0	0	1	1	1	0	DNA	mismatch	repair	protein	HSM3,	N	terminal	domain
AAA_27	PF13514.6	gi|284162172|ref|YP_003400795.1|	-	0.046	13.3	0.0	0.071	12.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|284162172|ref|YP_003400795.1|	-	0.048	13.7	0.0	0.52	10.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.6	gi|284162172|ref|YP_003400795.1|	-	0.088	12.5	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|284162172|ref|YP_003400795.1|	-	0.14	12.7	0.4	0.98	10.0	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
G-alpha	PF00503.20	gi|284162172|ref|YP_003400795.1|	-	0.21	10.7	0.0	0.21	10.7	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
TniB	PF05621.11	gi|284162172|ref|YP_003400795.1|	-	0.31	10.4	1.7	5.4	6.4	0.7	2.2	2	0	0	2	2	2	0	Bacterial	TniB	protein
FecCD	PF01032.18	gi|284162173|ref|YP_003400796.1|	-	4.3e-93	311.8	31.1	5.2e-93	311.5	31.1	1.0	1	0	0	1	1	1	1	FecCD	transport	family
Peripla_BP_2	PF01497.18	gi|284162174|ref|YP_003400797.1|	-	1.6e-34	119.6	0.0	2.3e-34	119.0	0.0	1.3	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF3439	PF11921.8	gi|284162175|ref|YP_003400798.1|	-	5.5	7.0	13.3	1.1	9.2	9.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3439)
Gate	PF07670.14	gi|284162177|ref|YP_003400800.1|	-	2.2e-08	34.3	11.9	2.6e-05	24.5	0.2	2.5	2	1	0	2	2	2	2	Nucleoside	recognition
CobN-Mg_chel	PF02514.16	gi|284162178|ref|YP_003400801.1|	-	0	1162.6	0.0	0	1162.4	0.0	1.0	1	0	0	1	1	1	1	CobN/Magnesium	Chelatase
AAA_lid_2	PF17863.1	gi|284162179|ref|YP_003400802.1|	-	1.4e-18	66.5	0.0	2.8e-18	65.5	0.0	1.5	1	0	0	1	1	1	1	AAA	lid	domain
VWA_2	PF13519.6	gi|284162179|ref|YP_003400802.1|	-	4.2e-13	49.9	0.0	4.3e-12	46.6	0.0	2.6	3	0	0	3	3	3	1	von	Willebrand	factor	type	A	domain
Mg_chelatase	PF01078.21	gi|284162179|ref|YP_003400802.1|	-	1.3e-11	44.3	0.1	1.9e-05	24.2	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|284162179|ref|YP_003400802.1|	-	7.9e-09	35.6	0.0	0.0044	17.0	0.0	2.9	3	0	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
VWA	PF00092.28	gi|284162179|ref|YP_003400802.1|	-	8.5e-07	29.4	0.0	1.6e-06	28.5	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
MCM	PF00493.23	gi|284162179|ref|YP_003400802.1|	-	9.8e-05	21.6	0.0	0.05	12.7	0.0	2.8	2	1	0	2	2	2	2	MCM	P-loop	domain
AAA	PF00004.29	gi|284162179|ref|YP_003400802.1|	-	0.0015	19.0	0.0	0.012	16.1	0.0	2.5	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|284162179|ref|YP_003400802.1|	-	0.0025	17.5	0.1	0.0054	16.4	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|284162179|ref|YP_003400802.1|	-	0.003	18.0	0.0	0.012	16.0	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|284162179|ref|YP_003400802.1|	-	0.0047	16.7	0.0	3.1	7.5	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_22	PF13401.6	gi|284162179|ref|YP_003400802.1|	-	0.0048	17.2	0.0	0.019	15.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
DUF815	PF05673.13	gi|284162179|ref|YP_003400802.1|	-	0.0051	16.0	0.0	0.024	13.8	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
Mg_chelatase_C	PF13335.6	gi|284162179|ref|YP_003400802.1|	-	0.038	14.6	0.5	0.096	13.3	0.2	1.9	2	0	0	2	2	1	0	Magnesium	chelatase,	subunit	ChlI	C-terminal
TsaE	PF02367.17	gi|284162179|ref|YP_003400802.1|	-	0.049	13.6	0.0	0.17	11.9	0.0	1.8	2	0	0	2	2	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_7	PF12775.7	gi|284162179|ref|YP_003400802.1|	-	0.1	12.1	0.0	0.35	10.4	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_30	PF13604.6	gi|284162179|ref|YP_003400802.1|	-	0.12	12.1	0.1	1.2	8.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
HTH_5	PF01022.20	gi|284162180|ref|YP_003400803.1|	-	7.2e-12	45.0	1.5	9.2e-12	44.6	0.6	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|284162180|ref|YP_003400803.1|	-	1.1e-07	31.7	0.0	1.7e-07	31.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|284162180|ref|YP_003400803.1|	-	3.1e-06	27.0	0.0	5e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|284162180|ref|YP_003400803.1|	-	3.5e-06	26.7	0.1	7e-06	25.7	0.1	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|284162180|ref|YP_003400803.1|	-	6.1e-06	25.7	0.2	1e-05	25.0	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|284162180|ref|YP_003400803.1|	-	0.0001	22.1	1.8	0.00016	21.5	0.2	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|284162180|ref|YP_003400803.1|	-	0.00012	22.5	0.0	0.00022	21.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|284162180|ref|YP_003400803.1|	-	0.00016	21.4	0.1	0.00027	20.7	0.1	1.3	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_45	PF14947.6	gi|284162180|ref|YP_003400803.1|	-	0.00042	20.3	0.1	0.00082	19.3	0.1	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|284162180|ref|YP_003400803.1|	-	0.00042	20.1	0.0	0.00051	19.8	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_10	PF04967.12	gi|284162180|ref|YP_003400803.1|	-	0.00056	19.7	0.0	0.0011	18.7	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Penicillinase_R	PF03965.16	gi|284162180|ref|YP_003400803.1|	-	0.00072	19.9	0.1	0.00094	19.5	0.1	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
MarR	PF01047.22	gi|284162180|ref|YP_003400803.1|	-	0.0018	18.2	0.1	0.0039	17.1	0.1	1.6	1	0	0	1	1	1	1	MarR	family
Sulfolobus_pRN	PF05584.11	gi|284162180|ref|YP_003400803.1|	-	0.0019	18.2	0.4	0.004	17.2	0.1	1.7	2	0	0	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
DUF1495	PF07381.11	gi|284162180|ref|YP_003400803.1|	-	0.0088	15.8	1.1	0.19	11.6	0.2	2.6	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain	(DUF1495)
B-block_TFIIIC	PF04182.12	gi|284162180|ref|YP_003400803.1|	-	0.0089	16.2	0.1	0.014	15.6	0.1	1.5	1	1	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
PaaX	PF07848.12	gi|284162180|ref|YP_003400803.1|	-	0.012	15.8	0.0	0.023	14.9	0.0	1.4	1	0	0	1	1	1	0	PaaX-like	protein
HTH_34	PF13601.6	gi|284162180|ref|YP_003400803.1|	-	0.015	15.5	0.6	0.038	14.2	0.1	1.8	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
Rrf2	PF02082.20	gi|284162180|ref|YP_003400803.1|	-	0.022	15.1	0.5	0.043	14.2	0.1	1.6	2	0	0	2	2	2	0	Transcriptional	regulator
DUF2513	PF10711.9	gi|284162180|ref|YP_003400803.1|	-	0.025	14.8	0.0	0.04	14.2	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
PadR	PF03551.14	gi|284162180|ref|YP_003400803.1|	-	0.043	13.8	0.3	0.12	12.4	0.2	1.8	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_12	PF08461.10	gi|284162180|ref|YP_003400803.1|	-	0.049	13.6	0.0	0.22	11.5	0.0	2.0	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF3116	PF11313.8	gi|284162180|ref|YP_003400803.1|	-	0.059	13.2	0.1	0.14	12.0	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
HTH_AsnC-type	PF13404.6	gi|284162180|ref|YP_003400803.1|	-	0.092	12.6	0.2	0.2	11.5	0.2	1.5	1	1	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_35	PF13693.6	gi|284162180|ref|YP_003400803.1|	-	0.092	12.8	0.2	0.21	11.7	0.1	1.6	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.19	gi|284162180|ref|YP_003400803.1|	-	0.11	12.8	0.1	0.19	11.9	0.1	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.9	gi|284162180|ref|YP_003400803.1|	-	0.18	12.0	0.5	5	7.3	0.5	2.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
NKAIN	PF05640.14	gi|284162181|ref|YP_003400804.1|	-	0.011	15.0	2.2	0.013	14.8	2.2	1.1	1	0	0	1	1	1	0	Na,K-Atpase	Interacting	protein
DUF3244	PF11589.8	gi|284162182|ref|YP_003400805.1|	-	0.026	14.6	0.1	0.26	11.4	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3244)
BtpA	PF03437.15	gi|284162183|ref|YP_003400806.1|	-	1.8e-88	296.3	0.0	2e-88	296.1	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
Trp_syntA	PF00290.20	gi|284162183|ref|YP_003400806.1|	-	0.00043	19.2	0.1	0.00095	18.1	0.0	1.6	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.17	gi|284162183|ref|YP_003400806.1|	-	0.0043	16.5	0.1	0.04	13.4	0.0	2.2	2	1	1	3	3	3	2	PcrB	family
His_biosynth	PF00977.21	gi|284162183|ref|YP_003400806.1|	-	0.019	14.5	0.0	0.035	13.6	0.0	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
TMP-TENI	PF02581.17	gi|284162183|ref|YP_003400806.1|	-	0.061	12.7	0.1	0.42	9.9	0.0	2.1	2	1	0	2	2	2	0	Thiamine	monophosphate	synthase
HTH_24	PF13412.6	gi|284162184|ref|YP_003400807.1|	-	0.00056	19.4	0.0	0.0012	18.4	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|284162184|ref|YP_003400807.1|	-	0.00074	19.5	0.0	0.0019	18.2	0.0	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|284162184|ref|YP_003400807.1|	-	0.00076	19.3	0.0	0.001	18.9	0.0	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|284162184|ref|YP_003400807.1|	-	0.0012	18.6	0.3	0.0025	17.6	0.1	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
DUF494	PF04361.13	gi|284162184|ref|YP_003400807.1|	-	0.013	15.4	0.3	0.015	15.2	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF494)
KxDL	PF10241.9	gi|284162184|ref|YP_003400807.1|	-	0.018	15.3	1.2	2.8	8.3	0.1	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein
HTH_IclR	PF09339.10	gi|284162184|ref|YP_003400807.1|	-	0.019	14.8	0.0	0.028	14.2	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF4423	PF14394.6	gi|284162184|ref|YP_003400807.1|	-	0.021	14.6	0.7	0.12	12.0	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Rrf2	PF02082.20	gi|284162184|ref|YP_003400807.1|	-	0.033	14.5	0.1	0.043	14.2	0.1	1.3	1	1	0	1	1	1	0	Transcriptional	regulator
FAE1_CUT1_RppA	PF08392.12	gi|284162184|ref|YP_003400807.1|	-	0.057	12.7	0.1	0.059	12.6	0.1	1.1	1	0	0	1	1	1	0	FAE1/Type	III	polyketide	synthase-like	protein
RuvB_C	PF05491.13	gi|284162184|ref|YP_003400807.1|	-	0.059	13.2	0.1	0.27	11.1	0.0	1.9	1	1	1	2	2	2	0	RuvB	C-terminal	winged	helix	domain
DUF2250	PF10007.9	gi|284162184|ref|YP_003400807.1|	-	0.069	13.3	0.5	0.26	11.4	0.3	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RP-C	PF03428.13	gi|284162184|ref|YP_003400807.1|	-	0.14	11.8	0.7	2.7	7.6	0.1	2.6	2	1	0	2	2	2	0	Replication	protein	C	N-terminal	domain
SAB	PF04382.13	gi|284162184|ref|YP_003400807.1|	-	0.28	11.3	1.1	0.94	9.6	0.1	2.2	2	0	0	2	2	2	0	SAB	domain
Ribosomal_S13_N	PF08069.12	gi|284162185|ref|YP_003400808.1|	-	2.1e-29	101.3	0.3	3.8e-29	100.5	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.22	gi|284162185|ref|YP_003400808.1|	-	4.6e-17	62.0	1.7	6.7e-17	61.5	1.7	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
GatB_N	PF02934.15	gi|284162186|ref|YP_003400809.1|	-	4.5e-73	246.0	0.2	6.1e-73	245.6	0.2	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GAD	PF02938.14	gi|284162186|ref|YP_003400809.1|	-	4.1e-19	68.6	0.5	1.8e-18	66.5	0.0	2.4	2	0	0	2	2	2	1	GAD	domain
GatB_Yqey	PF02637.18	gi|284162186|ref|YP_003400809.1|	-	3.5e-18	65.9	3.9	3.5e-18	65.9	3.9	1.9	2	0	0	2	2	2	1	GatB	domain
DUF1152	PF06626.12	gi|284162187|ref|YP_003400810.1|	-	3.6e-100	335.0	0.8	4.1e-100	334.8	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
DpnII	PF04556.12	gi|284162187|ref|YP_003400810.1|	-	0.043	13.1	0.3	0.12	11.7	0.1	1.8	1	1	0	2	2	2	0	DpnII	restriction	endonuclease
Endonuclease_5	PF04493.14	gi|284162188|ref|YP_003400811.1|	-	2.2e-61	207.0	0.0	2.7e-61	206.7	0.0	1.0	1	0	0	1	1	1	1	Endonuclease	V
DUF99	PF01949.16	gi|284162188|ref|YP_003400811.1|	-	8.7e-05	22.0	0.0	0.0002	20.8	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF99
ASCH	PF04266.14	gi|284162189|ref|YP_003400812.1|	-	4e-16	59.5	0.8	4.6e-16	59.3	0.8	1.0	1	0	0	1	1	1	1	ASCH	domain
DUF4947	PF16305.5	gi|284162189|ref|YP_003400812.1|	-	0.0018	18.3	0.1	0.0021	18.1	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4947)
DUF3850	PF12961.7	gi|284162189|ref|YP_003400812.1|	-	0.031	14.3	0.2	0.042	13.9	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3850)
Helicase_RecD	PF05127.14	gi|284162190|ref|YP_003400813.1|	-	1.4e-54	184.6	0.0	2.9e-54	183.6	0.0	1.6	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.6	gi|284162190|ref|YP_003400813.1|	-	1.8e-46	158.4	0.0	2e-30	105.9	0.0	2.6	1	1	1	2	2	2	2	GNAT	acetyltransferase	2
DUF1726	PF08351.11	gi|284162190|ref|YP_003400813.1|	-	7.2e-28	96.4	0.1	1.3e-26	92.3	0.0	3.2	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF1726)
tRNA_bind_2	PF13725.6	gi|284162190|ref|YP_003400813.1|	-	4.9e-07	29.7	0.7	4.9e-07	29.7	0.7	2.4	2	1	0	2	2	2	1	Possible	tRNA	binding	domain
Acetyltransf_1	PF00583.25	gi|284162190|ref|YP_003400813.1|	-	0.0043	17.3	0.0	0.016	15.4	0.0	2.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
MerR	PF00376.23	gi|284162190|ref|YP_003400813.1|	-	0.012	15.4	0.0	0.042	13.6	0.0	2.0	1	0	0	1	1	1	0	MerR	family	regulatory	protein
AAA_19	PF13245.6	gi|284162190|ref|YP_003400813.1|	-	0.019	15.3	0.0	0.3	11.4	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|284162190|ref|YP_003400813.1|	-	0.039	13.7	0.0	0.095	12.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
FapA	PF03961.13	gi|284162190|ref|YP_003400813.1|	-	0.44	9.1	2.2	0.79	8.3	2.2	1.4	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
DUF4298	PF14131.6	gi|284162190|ref|YP_003400813.1|	-	2.6	8.0	7.1	14	5.7	0.1	3.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4298)
Usp	PF00582.26	gi|284162191|ref|YP_003400814.1|	-	5.7e-37	127.4	4.7	1.6e-17	64.4	0.4	4.0	2	2	1	3	3	3	3	Universal	stress	protein	family
RsgA_GTPase	PF03193.16	gi|284162191|ref|YP_003400814.1|	-	0.017	15.0	0.1	0.041	13.8	0.1	1.5	2	0	0	2	2	2	0	RsgA	GTPase
Glyco_trans_1_4	PF13692.6	gi|284162192|ref|YP_003400815.1|	-	2.9e-10	40.7	0.0	5.6e-10	39.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|284162192|ref|YP_003400815.1|	-	1.7e-08	34.2	0.0	7.7e-08	32.1	0.0	1.9	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284162192|ref|YP_003400815.1|	-	3e-06	27.3	0.0	6.4e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Aldo_ket_red	PF00248.21	gi|284162192|ref|YP_003400815.1|	-	0.0064	15.7	0.0	0.0098	15.1	0.0	1.2	1	0	0	1	1	1	1	Aldo/keto	reductase	family
5-FTHF_cyc-lig	PF01812.20	gi|284162193|ref|YP_003400816.1|	-	1.6e-20	73.7	0.0	2e-20	73.4	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
T2SSE_N	PF05157.15	gi|284162193|ref|YP_003400816.1|	-	0.064	13.5	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	E,	N-terminal	domain
OB_aCoA_assoc	PF01796.17	gi|284162194|ref|YP_003400817.1|	-	2.8e-18	65.7	0.2	3.6e-18	65.3	0.2	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|284162194|ref|YP_003400817.1|	-	8.3e-08	32.0	0.1	1.4e-07	31.3	0.1	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF4431	PF14485.6	gi|284162194|ref|YP_003400817.1|	-	0.19	11.6	0.0	0.31	10.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4431)
Thiolase_N	PF00108.23	gi|284162195|ref|YP_003400818.1|	-	8.6e-20	71.2	0.0	1.8e-19	70.1	0.0	1.5	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|284162195|ref|YP_003400818.1|	-	3.1e-09	36.5	0.1	8.7e-09	35.1	0.1	1.7	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|284162195|ref|YP_003400818.1|	-	4.5e-08	33.0	2.1	2.2e-07	30.7	2.2	1.9	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
YdjM	PF04307.14	gi|284162197|ref|YP_003400820.1|	-	9e-19	67.4	8.1	1.2e-18	67.0	8.1	1.2	1	0	0	1	1	1	1	LexA-binding,	inner	membrane-associated	putative	hydrolase
SecD_SecF	PF02355.16	gi|284162197|ref|YP_003400820.1|	-	1.9	7.8	8.4	0.068	12.5	1.4	2.1	3	0	0	3	3	3	0	Protein	export	membrane	protein
HSP20	PF00011.21	gi|284162198|ref|YP_003400821.1|	-	7.3e-25	87.1	2.4	8.8e-25	86.8	2.4	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|284162198|ref|YP_003400821.1|	-	1.1e-13	50.5	0.1	2e-13	49.7	0.1	1.4	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
GvpH	PF05455.11	gi|284162198|ref|YP_003400821.1|	-	0.01	15.9	0.1	0.034	14.2	0.1	1.7	2	0	0	2	2	2	0	GvpH
TubC_N	PF18563.1	gi|284162198|ref|YP_003400821.1|	-	0.047	13.7	0.0	0.13	12.3	0.0	1.7	2	0	0	2	2	2	0	TubC	N-terminal	docking	domain
DUF2807	PF10988.8	gi|284162198|ref|YP_003400821.1|	-	0.074	12.8	0.7	0.11	12.2	0.7	1.3	1	1	0	1	1	1	0	Putative	auto-transporter	adhesin,	head	GIN	domain
ALS2CR8	PF15299.6	gi|284162198|ref|YP_003400821.1|	-	0.093	12.6	1.0	0.12	12.3	1.0	1.1	1	0	0	1	1	1	0	Amyotrophic	lateral	sclerosis	2	chromosomal	region	candidate	gene	8
MCPsignal	PF00015.21	gi|284162199|ref|YP_003400822.1|	-	1.1e-43	149.1	44.0	1.2e-41	142.3	16.4	4.0	1	1	3	4	4	4	4	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF948	PF06103.11	gi|284162199|ref|YP_003400822.1|	-	2.5e-05	24.5	24.7	0.36	11.1	0.6	5.3	1	1	3	4	4	4	2	Bacterial	protein	of	unknown	function	(DUF948)
Syntaxin_2	PF14523.6	gi|284162199|ref|YP_003400822.1|	-	0.0037	17.6	22.8	0.45	10.9	4.8	4.3	1	1	3	4	4	4	4	Syntaxin-like	protein
DUF489	PF04356.12	gi|284162199|ref|YP_003400822.1|	-	0.0048	16.9	17.8	0.0079	16.2	4.9	2.7	2	2	0	2	2	2	1	Protein	of	unknown	function	(DUF489)
Med30	PF11315.8	gi|284162199|ref|YP_003400822.1|	-	0.0073	16.5	7.1	0.0073	16.5	7.1	2.8	2	1	0	2	2	2	1	Mediator	complex	subunit	30
Dak2	PF02734.17	gi|284162199|ref|YP_003400822.1|	-	0.041	13.8	23.1	0.36	10.7	0.7	4.1	1	1	3	4	4	4	0	DAK2	domain
DUF1664	PF07889.12	gi|284162199|ref|YP_003400822.1|	-	0.07	13.2	25.5	1.8	8.6	3.6	4.4	2	2	1	4	4	4	0	Protein	of	unknown	function	(DUF1664)
PHA_synth_III_E	PF09712.10	gi|284162199|ref|YP_003400822.1|	-	0.085	11.9	11.7	0.49	9.4	0.4	3.0	2	2	0	2	2	2	0	Poly(R)-hydroxyalkanoic	acid	synthase	subunit	(PHA_synth_III_E)
Spc7	PF08317.11	gi|284162199|ref|YP_003400822.1|	-	0.098	11.5	30.9	0.26	10.1	9.4	2.4	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DUF5444	PF17519.2	gi|284162199|ref|YP_003400822.1|	-	0.11	12.4	0.2	1.3	9.0	0.0	2.6	2	1	1	3	3	3	0	Family	of	unknown	function	(DUF5444)
Fib_alpha	PF08702.10	gi|284162199|ref|YP_003400822.1|	-	0.16	12.2	25.3	0.79	9.9	5.3	4.1	2	2	2	4	4	4	0	Fibrinogen	alpha/beta	chain	family
FlgN	PF05130.12	gi|284162199|ref|YP_003400822.1|	-	0.16	12.5	32.0	0.15	12.6	2.1	4.1	1	1	3	4	4	4	0	FlgN	protein
RmuC	PF02646.16	gi|284162199|ref|YP_003400822.1|	-	0.22	10.6	23.9	0.56	9.3	1.5	4.3	1	1	2	4	4	4	0	RmuC	family
DUF87	PF01935.17	gi|284162199|ref|YP_003400822.1|	-	0.33	11.0	18.2	0.079	13.0	2.2	3.1	1	1	1	3	3	3	0	Helicase	HerA,	central	domain
T7SS_ESX_EspC	PF10824.8	gi|284162199|ref|YP_003400822.1|	-	0.38	11.2	19.6	6.5	7.3	1.4	4.7	3	2	1	4	4	4	0	Excreted	virulence	factor	EspC,	type	VII	ESX	diderm
Vps53_N	PF04100.12	gi|284162199|ref|YP_003400822.1|	-	0.6	9.0	29.7	3.3	6.6	0.4	4.1	2	2	2	4	4	4	0	Vps53-like,	N-terminal
Mce4_CUP1	PF11887.8	gi|284162199|ref|YP_003400822.1|	-	0.62	9.5	9.5	3.7	6.9	1.2	2.6	1	1	0	2	2	2	0	Cholesterol	uptake	porter	CUP1	of	Mce4,	putative
GLE1	PF07817.13	gi|284162199|ref|YP_003400822.1|	-	0.72	9.0	14.3	0.022	14.0	1.3	3.1	2	2	2	4	4	4	0	GLE1-like	protein
RPW8	PF05659.11	gi|284162199|ref|YP_003400822.1|	-	0.93	9.2	19.4	0.53	10.0	0.5	4.4	2	2	3	5	5	5	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Sec20	PF03908.13	gi|284162199|ref|YP_003400822.1|	-	1.2	9.1	20.3	0.76	9.7	1.6	4.9	2	2	3	5	5	5	0	Sec20
ISG65-75	PF11727.8	gi|284162199|ref|YP_003400822.1|	-	1.2	8.3	29.9	0.44	9.7	5.1	3.3	1	1	1	3	3	3	0	Invariant	surface	glycoprotein
Dopey_N	PF04118.14	gi|284162199|ref|YP_003400822.1|	-	1.2	8.1	5.6	2	7.5	1.1	2.2	2	0	0	2	2	2	0	Dopey,	N-terminal
BLOC1_2	PF10046.9	gi|284162199|ref|YP_003400822.1|	-	1.8	8.9	29.4	0.84	10.0	1.6	5.4	2	2	3	5	5	5	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Laminin_II	PF06009.12	gi|284162199|ref|YP_003400822.1|	-	2.2	8.3	34.7	0.48	10.4	9.5	4.2	2	2	2	4	4	4	0	Laminin	Domain	II
DUF745	PF05335.13	gi|284162199|ref|YP_003400822.1|	-	2.3	7.9	42.8	0.76	9.5	6.1	4.2	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF745)
V_ATPase_I	PF01496.19	gi|284162199|ref|YP_003400822.1|	-	2.3	6.0	25.4	1.1	7.1	12.7	2.1	1	1	0	2	2	2	0	V-type	ATPase	116kDa	subunit	family
CheZ	PF04344.13	gi|284162199|ref|YP_003400822.1|	-	3	7.7	22.6	0.43	10.5	3.2	3.6	1	1	2	3	3	3	0	Chemotaxis	phosphatase,	CheZ
Mis12	PF05859.12	gi|284162199|ref|YP_003400822.1|	-	3.7	7.6	16.7	11	6.1	0.2	4.1	3	1	0	3	3	3	0	Mis12	protein
Spectrin	PF00435.21	gi|284162199|ref|YP_003400822.1|	-	3.8	8.0	23.3	2.4	8.7	2.3	4.8	1	1	3	5	5	5	0	Spectrin	repeat
Sec34	PF04136.15	gi|284162199|ref|YP_003400822.1|	-	5.4	6.9	22.4	7.6	6.4	2.0	4.5	3	1	1	4	4	4	0	Sec34-like	family
TMPIT	PF07851.13	gi|284162199|ref|YP_003400822.1|	-	6.9	5.8	25.6	6.2	6.0	4.0	3.3	1	1	2	3	3	3	0	TMPIT-like	protein
ING	PF12998.7	gi|284162199|ref|YP_003400822.1|	-	7.7	7.2	18.9	0.33	11.6	4.5	4.0	2	2	1	3	3	3	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Succ_DH_flav_C	PF02910.20	gi|284162199|ref|YP_003400822.1|	-	7.8	6.5	8.4	0.62	10.0	0.4	3.1	2	1	2	4	4	4	0	Fumarate	reductase	flavoprotein	C-term
FUSC	PF04632.12	gi|284162199|ref|YP_003400822.1|	-	7.9	4.9	13.4	7.3	5.0	4.1	2.2	1	1	1	2	2	2	0	Fusaric	acid	resistance	protein	family
DUF4041	PF13250.6	gi|284162199|ref|YP_003400822.1|	-	8.5	6.3	11.4	5.5	6.9	0.1	4.4	5	0	0	5	5	4	0	Domain	of	unknown	function	(DUF4041)
CRF-BP	PF05428.11	gi|284162200|ref|YP_003400823.1|	-	0.12	11.2	0.0	0.12	11.2	0.0	1.0	1	0	0	1	1	1	0	Corticotropin-releasing	factor	binding	protein	(CRF-BP)
Ribosomal_S17e	PF00833.18	gi|284162201|ref|YP_003400824.1|	-	1.7e-13	50.6	0.2	1.8e-13	50.5	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	S17
DHDPS	PF00701.22	gi|284162202|ref|YP_003400825.1|	-	1.5e-98	329.1	0.0	1.7e-98	328.9	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
ELFV_dehydrog	PF00208.21	gi|284162202|ref|YP_003400825.1|	-	0.00075	19.3	0.0	0.0013	18.5	0.0	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
AF0941-like	PF14591.6	gi|284162203|ref|YP_003400826.1|	-	4.7e-44	149.5	12.0	5.3e-44	149.4	12.0	1.0	1	0	0	1	1	1	1	AF0941-like
GrpE	PF01025.19	gi|284162203|ref|YP_003400826.1|	-	0.00015	21.5	3.9	0.13	12.0	0.2	2.1	1	1	0	2	2	2	2	GrpE
Baculo_PEP_C	PF04513.12	gi|284162203|ref|YP_003400826.1|	-	0.00066	19.7	0.2	0.014	15.4	0.0	2.0	2	0	0	2	2	2	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DivIC	PF04977.15	gi|284162203|ref|YP_003400826.1|	-	0.014	15.1	0.9	2.5	7.9	0.1	2.3	2	0	0	2	2	2	0	Septum	formation	initiator
TPR_22	PF18833.1	gi|284162203|ref|YP_003400826.1|	-	0.046	13.9	0.8	0.12	12.5	0.8	1.8	1	1	0	1	1	1	0	Tetratricopeptide	repeat
Dak2	PF02734.17	gi|284162203|ref|YP_003400826.1|	-	0.048	13.6	0.2	0.81	9.6	0.0	2.0	1	1	0	2	2	2	0	DAK2	domain
Gln-synt_C	PF00120.24	gi|284162203|ref|YP_003400826.1|	-	0.068	12.2	0.2	0.49	9.3	0.1	1.9	1	1	0	2	2	2	0	Glutamine	synthetase,	catalytic	domain
Ribosomal_S30AE	PF02482.19	gi|284162203|ref|YP_003400826.1|	-	0.069	13.9	2.4	0.17	12.7	2.4	1.8	1	1	0	1	1	1	0	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Globin	PF00042.22	gi|284162203|ref|YP_003400826.1|	-	0.069	13.7	0.1	1.1	9.9	0.0	2.1	2	0	0	2	2	2	0	Globin
DUF4298	PF14131.6	gi|284162203|ref|YP_003400826.1|	-	0.078	12.9	1.2	2.8	8.0	0.1	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4298)
F_actin_bind	PF08919.10	gi|284162203|ref|YP_003400826.1|	-	0.086	12.9	0.1	1.4	9.0	0.0	2.2	2	0	0	2	2	2	0	F-actin	binding
Prominin	PF05478.11	gi|284162203|ref|YP_003400826.1|	-	0.09	10.7	0.9	0.18	9.8	0.9	1.4	1	1	0	1	1	1	0	Prominin
FadA	PF09403.10	gi|284162203|ref|YP_003400826.1|	-	0.12	12.8	2.8	3.1	8.3	0.3	2.4	2	0	0	2	2	2	0	Adhesion	protein	FadA
DUF4279	PF14106.6	gi|284162203|ref|YP_003400826.1|	-	0.13	12.4	1.1	0.74	10.0	0.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4279)
CorA	PF01544.18	gi|284162203|ref|YP_003400826.1|	-	0.18	11.1	3.8	0.41	9.9	0.5	2.0	2	0	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
Fib_alpha	PF08702.10	gi|284162203|ref|YP_003400826.1|	-	0.26	11.5	2.8	0.37	11.0	2.1	1.6	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
YtxH	PF12732.7	gi|284162203|ref|YP_003400826.1|	-	0.26	11.8	4.5	2.5	8.7	0.4	2.4	2	1	0	2	2	2	0	YtxH-like	protein
DHR10	PF18595.1	gi|284162203|ref|YP_003400826.1|	-	0.79	9.8	5.5	0.4	10.8	0.2	2.4	3	0	0	3	3	3	0	Designed	helical	repeat	protein	10	domain
Prefoldin_2	PF01920.20	gi|284162203|ref|YP_003400826.1|	-	0.94	9.5	6.8	1.7	8.6	0.6	2.7	2	1	0	2	2	2	0	Prefoldin	subunit
NifU	PF01106.17	gi|284162204|ref|YP_003400827.1|	-	4.9e-27	93.9	0.6	5.6e-27	93.7	0.6	1.0	1	0	0	1	1	1	1	NifU-like	domain
AARP2CN	PF08142.12	gi|284162204|ref|YP_003400827.1|	-	0.076	13.1	0.0	0.1	12.7	0.0	1.2	1	0	0	1	1	1	0	AARP2CN	(NUC121)	domain
DUF2695	PF10905.8	gi|284162205|ref|YP_003400828.1|	-	0.28	11.4	4.1	7	7.0	2.3	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2695)
TrkA_C	PF02080.21	gi|284162206|ref|YP_003400829.1|	-	6.9e-28	96.3	0.1	6e-13	48.4	0.0	2.5	2	0	0	2	2	2	2	TrkA-C	domain
PhoU	PF01895.19	gi|284162206|ref|YP_003400829.1|	-	3.1e-17	62.8	14.9	2e-12	47.4	3.9	2.8	3	0	0	3	3	3	2	PhoU	domain
UvrD_C	PF13361.6	gi|284162206|ref|YP_003400829.1|	-	0.0014	18.0	1.2	0.0022	17.4	0.7	1.5	1	1	1	2	2	2	1	UvrD-like	helicase	C-terminal	domain
RNA_pol_Rpb5_C	PF01191.19	gi|284162206|ref|YP_003400829.1|	-	0.08	12.8	0.1	0.26	11.2	0.1	1.9	1	0	0	1	1	1	0	RNA	polymerase	Rpb5,	C-terminal	domain
Cupin_6	PF12852.7	gi|284162206|ref|YP_003400829.1|	-	0.11	12.2	0.0	2.2	8.0	0.0	2.5	2	1	1	3	3	3	0	Cupin
T6PP_N	PF18572.1	gi|284162206|ref|YP_003400829.1|	-	3.8	7.4	8.1	3.7	7.4	0.1	3.6	3	1	0	3	3	3	0	Trehalose-6-phosphate	phosphatase	N-terminal	helical	bundle	domain
MttA_Hcf106	PF02416.16	gi|284162207|ref|YP_003400830.1|	-	1.5e-11	43.5	0.1	1.9e-11	43.1	0.1	1.3	1	1	0	1	1	1	1	mttA/Hcf106	family
MttA_Hcf106	PF02416.16	gi|284162208|ref|YP_003400831.1|	-	1.3e-16	59.7	3.1	1.9e-16	59.1	3.1	1.5	1	1	0	1	1	1	1	mttA/Hcf106	family
SurA_N_3	PF13624.6	gi|284162208|ref|YP_003400831.1|	-	1.9	8.3	5.1	0.56	10.0	0.3	1.9	1	1	1	2	2	2	0	SurA	N-terminal	domain
eIF-5a	PF01287.20	gi|284162209|ref|YP_003400832.1|	-	2.7e-09	37.0	0.3	4.7e-09	36.2	0.3	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.12	gi|284162209|ref|YP_003400832.1|	-	0.00056	19.9	0.0	0.00085	19.3	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	KOW-like	domain
EFP	PF01132.20	gi|284162209|ref|YP_003400832.1|	-	0.12	12.5	0.0	0.24	11.5	0.0	1.6	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
Arginase	PF00491.21	gi|284162210|ref|YP_003400833.1|	-	1.6e-58	198.4	0.0	1.8e-58	198.3	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
YmdB	PF13277.6	gi|284162210|ref|YP_003400833.1|	-	0.12	11.7	0.0	0.22	10.8	0.0	1.3	1	0	0	1	1	1	0	YmdB-like	protein
CLP1_P	PF16575.5	gi|284162212|ref|YP_003400835.1|	-	1.1e-24	87.3	0.0	2.4e-24	86.2	0.0	1.6	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MMR_HSR1	PF01926.23	gi|284162212|ref|YP_003400835.1|	-	0.0053	16.8	0.1	0.7	10.0	0.0	2.6	3	0	0	3	3	3	2	50S	ribosome-binding	GTPase
Dynamin_N	PF00350.23	gi|284162212|ref|YP_003400835.1|	-	0.18	11.9	0.0	2.4	8.2	0.0	2.2	2	0	0	2	2	2	0	Dynamin	family
RNA_helicase	PF00910.22	gi|284162212|ref|YP_003400835.1|	-	0.18	12.2	0.0	0.36	11.2	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
GARS_A	PF01071.19	gi|284162213|ref|YP_003400836.1|	-	1.5e-74	250.0	0.2	2.4e-74	249.3	0.2	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.15	gi|284162213|ref|YP_003400836.1|	-	6.4e-28	97.4	0.0	1.4e-27	96.3	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.16	gi|284162213|ref|YP_003400836.1|	-	6e-19	68.1	0.1	1.3e-18	67.0	0.1	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_3	PF02655.14	gi|284162213|ref|YP_003400836.1|	-	1.4e-05	25.2	0.0	5e-05	23.4	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.10	gi|284162213|ref|YP_003400836.1|	-	0.0033	17.0	0.1	0.0087	15.6	0.0	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|284162213|ref|YP_003400836.1|	-	0.0044	16.6	0.0	0.0099	15.5	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|284162213|ref|YP_003400836.1|	-	0.013	14.8	0.0	0.022	14.0	0.0	1.3	1	0	0	1	1	1	0	Sugar-transfer	associated	ATP-grasp
LAL_C2	PF18603.1	gi|284162213|ref|YP_003400836.1|	-	0.039	14.1	0.0	0.56	10.4	0.0	2.7	2	0	0	2	2	2	0	L-amino	acid	ligase	C-terminal	domain	2
Corona_3	PF04694.12	gi|284162213|ref|YP_003400836.1|	-	0.052	13.9	0.0	1.8	9.0	0.0	2.6	2	0	0	2	2	2	0	Coronavirus	ORF3	protein
Bmp	PF02608.14	gi|284162213|ref|YP_003400836.1|	-	0.087	11.8	0.0	0.14	11.1	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter	substrate-binding	protein	PnrA-like
ATP-grasp_5	PF13549.6	gi|284162213|ref|YP_003400836.1|	-	0.097	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
CoA_binding_3	PF13727.6	gi|284162213|ref|YP_003400836.1|	-	0.1	12.6	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	CoA-binding	domain
BtrH_N	PF14399.6	gi|284162213|ref|YP_003400836.1|	-	0.16	12.2	0.0	0.39	11.0	0.0	1.6	1	0	0	1	1	1	0	Butirosin	biosynthesis	protein	H,	N-terminal
FKBP_C	PF00254.28	gi|284162214|ref|YP_003400837.1|	-	3.1e-13	49.9	2.1	1.4e-12	47.8	2.1	2.2	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
TMEM214	PF10151.9	gi|284162214|ref|YP_003400837.1|	-	0.24	9.8	5.6	0.29	9.5	5.6	1.1	1	0	0	1	1	1	0	TMEM214,	C-terminal,	caspase	4	activator
YqfQ	PF14181.6	gi|284162214|ref|YP_003400837.1|	-	4.7	7.4	7.6	6.8	6.8	7.6	1.3	1	0	0	1	1	1	0	YqfQ-like	protein
DUF4234	PF14018.6	gi|284162215|ref|YP_003400838.1|	-	1.5e-07	31.4	0.2	1.5e-07	31.4	0.2	3.6	3	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4234)
Yip1	PF04893.17	gi|284162215|ref|YP_003400838.1|	-	0.048	13.4	0.3	0.048	13.4	0.3	2.8	2	1	0	3	3	3	0	Yip1	domain
DUF4131	PF13567.6	gi|284162215|ref|YP_003400838.1|	-	0.56	9.9	4.8	0.8	9.3	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
TatC	PF00902.18	gi|284162215|ref|YP_003400838.1|	-	1.4	8.7	7.2	16	5.2	6.7	2.5	1	1	0	1	1	1	0	Sec-independent	protein	translocase	protein	(TatC)
UPF0179	PF03684.13	gi|284162216|ref|YP_003400839.1|	-	3.3e-52	176.1	0.7	3.8e-52	175.9	0.7	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
DUF523	PF04463.12	gi|284162217|ref|YP_003400840.1|	-	1.6e-41	141.5	0.0	1.8e-41	141.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF523)
Voltage_CLC	PF00654.20	gi|284162218|ref|YP_003400841.1|	-	9.7e-85	284.9	34.5	9.7e-85	284.9	34.5	1.8	2	0	0	2	2	2	1	Voltage	gated	chloride	channel
CBS	PF00571.28	gi|284162218|ref|YP_003400841.1|	-	5.9e-32	109.9	5.0	1.2e-16	60.9	0.4	2.7	2	0	0	2	2	2	2	CBS	domain
Peptidase_S55	PF05580.12	gi|284162218|ref|YP_003400841.1|	-	0.022	14.7	0.2	3.8	7.4	0.0	2.4	2	0	0	2	2	2	0	SpoIVB	peptidase	S55
AAA	PF00004.29	gi|284162219|ref|YP_003400842.1|	-	2.9e-103	341.6	0.0	3.7e-51	173.0	0.0	2.9	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|284162219|ref|YP_003400842.1|	-	4.7e-36	122.3	4.1	6.4e-19	67.5	0.8	2.9	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|284162219|ref|YP_003400842.1|	-	1.6e-32	111.5	0.3	5.1e-32	109.9	0.2	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.12	gi|284162219|ref|YP_003400842.1|	-	5e-16	58.8	0.0	7e-08	32.4	0.0	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
CDC48_2	PF02933.17	gi|284162219|ref|YP_003400842.1|	-	6.7e-16	57.8	0.0	3.4e-15	55.6	0.0	2.2	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_16	PF13191.6	gi|284162219|ref|YP_003400842.1|	-	3e-15	57.0	0.1	1.4e-06	28.8	0.0	3.8	3	1	0	3	3	3	2	AAA	ATPase	domain
AAA_2	PF07724.14	gi|284162219|ref|YP_003400842.1|	-	3.7e-15	56.4	0.0	4.3e-07	30.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.14	gi|284162219|ref|YP_003400842.1|	-	9.4e-14	51.6	0.3	5e-06	26.6	0.1	3.7	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.6	gi|284162219|ref|YP_003400842.1|	-	1.7e-11	44.3	0.0	4.8e-05	23.4	0.0	3.0	3	0	0	3	3	2	2	AAA	domain
TIP49	PF06068.13	gi|284162219|ref|YP_003400842.1|	-	2.5e-11	43.4	2.9	0.00011	21.6	0.0	3.7	4	0	0	4	4	3	2	TIP49	P-loop	domain
AAA_22	PF13401.6	gi|284162219|ref|YP_003400842.1|	-	2.7e-10	40.6	2.1	0.0077	16.5	0.0	4.5	3	2	0	3	3	2	2	AAA	domain
Vps4_C	PF09336.10	gi|284162219|ref|YP_003400842.1|	-	4.7e-09	36.1	0.6	0.00059	19.8	0.0	2.7	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_33	PF13671.6	gi|284162219|ref|YP_003400842.1|	-	1.3e-08	35.1	0.0	0.00085	19.5	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|284162219|ref|YP_003400842.1|	-	2.8e-08	34.4	0.0	0.012	16.2	0.0	3.1	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|284162219|ref|YP_003400842.1|	-	1.8e-07	31.1	0.0	0.011	15.4	0.0	2.6	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
RNA_helicase	PF00910.22	gi|284162219|ref|YP_003400842.1|	-	4.3e-07	30.3	0.0	0.023	15.1	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
AAA_7	PF12775.7	gi|284162219|ref|YP_003400842.1|	-	6.6e-07	29.0	0.0	0.052	13.1	0.0	2.7	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|284162219|ref|YP_003400842.1|	-	1.4e-06	27.9	0.4	0.055	12.8	0.1	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
DUF2075	PF09848.9	gi|284162219|ref|YP_003400842.1|	-	1.9e-06	27.4	0.0	0.055	12.7	0.0	3.1	3	0	0	3	3	3	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.6	gi|284162219|ref|YP_003400842.1|	-	2e-06	27.7	0.0	0.057	13.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
ATPase_2	PF01637.18	gi|284162219|ref|YP_003400842.1|	-	3.4e-06	27.1	1.4	0.074	13.0	0.0	4.4	3	1	1	4	4	4	1	ATPase	domain	predominantly	from	Archaea
AAA_28	PF13521.6	gi|284162219|ref|YP_003400842.1|	-	4.2e-06	27.1	0.0	0.067	13.4	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|284162219|ref|YP_003400842.1|	-	4.2e-06	26.6	0.1	0.17	11.6	0.0	3.5	3	1	0	3	3	3	2	Sigma-54	interaction	domain
TsaE	PF02367.17	gi|284162219|ref|YP_003400842.1|	-	6.1e-06	26.3	0.0	0.11	12.5	0.0	3.0	2	1	1	3	3	3	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_25	PF13481.6	gi|284162219|ref|YP_003400842.1|	-	1.8e-05	24.4	4.0	1.6	8.3	1.3	4.4	3	1	0	3	3	3	2	AAA	domain
AAA_3	PF07726.11	gi|284162219|ref|YP_003400842.1|	-	1.8e-05	24.6	0.0	0.18	11.7	0.0	2.6	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF815	PF05673.13	gi|284162219|ref|YP_003400842.1|	-	1.9e-05	23.9	0.0	0.073	12.2	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
ABC_tran	PF00005.27	gi|284162219|ref|YP_003400842.1|	-	2.9e-05	24.6	0.0	0.057	13.9	0.0	2.6	2	0	0	2	2	2	1	ABC	transporter
Zeta_toxin	PF06414.12	gi|284162219|ref|YP_003400842.1|	-	3e-05	23.4	0.1	0.22	10.8	0.0	3.0	2	0	0	2	2	2	2	Zeta	toxin
Parvo_NS1	PF01057.17	gi|284162219|ref|YP_003400842.1|	-	3.4e-05	23.1	0.1	0.23	10.5	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ATPase	PF06745.13	gi|284162219|ref|YP_003400842.1|	-	3.5e-05	23.3	2.8	0.52	9.6	0.0	4.1	5	0	0	5	5	4	2	KaiC
AAA_17	PF13207.6	gi|284162219|ref|YP_003400842.1|	-	4.1e-05	24.0	0.1	1.7	9.0	0.0	3.9	3	0	0	3	3	3	2	AAA	domain
PhoH	PF02562.16	gi|284162219|ref|YP_003400842.1|	-	0.00012	21.6	0.4	0.51	9.8	0.0	2.8	2	0	0	2	2	2	2	PhoH-like	protein
Cytidylate_kin2	PF13189.6	gi|284162219|ref|YP_003400842.1|	-	0.00021	21.5	1.2	1.1	9.4	0.0	3.1	3	0	0	3	3	3	2	Cytidylate	kinase-like	family
AAA_11	PF13086.6	gi|284162219|ref|YP_003400842.1|	-	0.00025	20.9	0.0	0.66	9.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Bac_DnaA	PF00308.18	gi|284162219|ref|YP_003400842.1|	-	0.00026	20.9	0.1	1.1	9.0	0.0	3.6	2	2	1	3	3	3	1	Bacterial	dnaA	protein
AAA_30	PF13604.6	gi|284162219|ref|YP_003400842.1|	-	0.00057	19.7	2.0	1.1	9.0	0.0	3.1	4	0	0	4	4	2	2	AAA	domain
NB-ARC	PF00931.22	gi|284162219|ref|YP_003400842.1|	-	0.00071	18.8	0.0	1.7	7.8	0.0	2.8	2	0	0	2	2	2	2	NB-ARC	domain
Sigma54_activ_2	PF14532.6	gi|284162219|ref|YP_003400842.1|	-	0.00091	19.4	0.0	2.2	8.4	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
NTPase_1	PF03266.15	gi|284162219|ref|YP_003400842.1|	-	0.0012	18.7	1.4	3.9	7.4	0.0	3.7	2	1	1	3	3	3	0	NTPase
Cytidylate_kin	PF02224.18	gi|284162219|ref|YP_003400842.1|	-	0.0015	18.3	0.1	2.3	7.9	0.0	2.7	2	0	0	2	2	2	2	Cytidylate	kinase
AAA_19	PF13245.6	gi|284162219|ref|YP_003400842.1|	-	0.0016	18.8	3.5	1.6	9.0	0.1	3.1	3	1	1	4	4	3	2	AAA	domain
ResIII	PF04851.15	gi|284162219|ref|YP_003400842.1|	-	0.0017	18.4	0.0	1.3	9.0	0.0	2.7	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
NACHT	PF05729.12	gi|284162219|ref|YP_003400842.1|	-	0.0019	18.2	0.2	6.2	6.7	0.0	3.5	3	1	1	4	4	3	0	NACHT	domain
SKI	PF01202.22	gi|284162219|ref|YP_003400842.1|	-	0.002	18.3	1.5	1	9.5	0.0	3.0	3	0	0	3	3	2	1	Shikimate	kinase
TniB	PF05621.11	gi|284162219|ref|YP_003400842.1|	-	0.0062	16.0	0.1	6	6.2	0.0	3.6	4	0	0	4	4	4	0	Bacterial	TniB	protein
Cons_hypoth95	PF03602.15	gi|284162219|ref|YP_003400842.1|	-	0.0068	16.1	0.4	2.5	7.7	0.0	2.4	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Rad17	PF03215.15	gi|284162219|ref|YP_003400842.1|	-	0.0091	15.9	0.0	7	6.5	0.0	2.7	2	1	0	2	2	2	0	Rad17	P-loop	domain
T2SSE	PF00437.20	gi|284162219|ref|YP_003400842.1|	-	0.039	13.0	0.1	6.9	5.6	0.1	2.6	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
Hydin_ADK	PF17213.3	gi|284162219|ref|YP_003400842.1|	-	0.043	14.1	0.1	7.1	6.9	0.0	2.6	3	0	0	3	3	2	0	Hydin	Adenylate	kinase-like	domain
Zot	PF05707.12	gi|284162219|ref|YP_003400842.1|	-	0.049	13.3	0.0	3.9	7.1	0.0	2.8	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
IPT	PF01745.16	gi|284162219|ref|YP_003400842.1|	-	0.055	12.9	1.8	7.8	5.8	0.0	2.7	3	0	0	3	3	3	0	Isopentenyl	transferase
MCM	PF00493.23	gi|284162219|ref|YP_003400842.1|	-	0.055	12.6	0.0	2.9	6.9	0.0	2.5	2	0	0	2	2	2	0	MCM	P-loop	domain
AAA_6	PF12774.7	gi|284162219|ref|YP_003400842.1|	-	0.067	12.2	0.4	2.4	7.0	0.0	2.6	3	0	0	3	3	2	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
AAA_29	PF13555.6	gi|284162219|ref|YP_003400842.1|	-	0.095	12.5	0.0	22	4.9	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|284162219|ref|YP_003400842.1|	-	0.17	12.4	2.8	67	3.9	0.0	3.5	3	0	0	3	3	3	0	AAA	domain
EF-G-binding_N	PF07299.11	gi|284162219|ref|YP_003400842.1|	-	0.89	10.1	4.0	4.4	7.9	1.9	2.9	3	0	0	3	3	2	0	Elongation	factor	G-binding	protein,	N-terminal
DUF111	PF01969.17	gi|284162220|ref|YP_003400843.1|	-	4.7e-32	111.5	0.6	5.9e-32	111.2	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
Phage_int_SAM_2	PF12834.7	gi|284162220|ref|YP_003400843.1|	-	0.088	13.5	0.1	0.2	12.4	0.1	1.6	1	0	0	1	1	1	0	Phage	integrase,	N-terminal
Rad51	PF08423.11	gi|284162221|ref|YP_003400844.1|	-	1e-32	113.4	0.0	1.2e-32	113.1	0.0	1.1	1	0	0	1	1	1	1	Rad51
ATPase	PF06745.13	gi|284162221|ref|YP_003400844.1|	-	5.3e-15	55.4	1.6	2.5e-14	53.2	1.6	1.8	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|284162221|ref|YP_003400844.1|	-	3.2e-12	46.5	0.0	5e-12	45.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|284162221|ref|YP_003400844.1|	-	1.9e-10	40.7	0.0	2.1e-10	40.5	0.0	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_24	PF13479.6	gi|284162221|ref|YP_003400844.1|	-	1.5e-07	31.3	1.1	3.8e-07	30.0	1.1	1.6	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|284162221|ref|YP_003400844.1|	-	1.9e-07	30.7	0.6	0.0054	16.1	0.0	2.1	1	1	1	2	2	2	2	DnaB-like	helicase	C	terminal	domain
CbiA	PF01656.23	gi|284162221|ref|YP_003400844.1|	-	1.3e-05	25.2	0.0	1.8e-05	24.8	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.17	gi|284162221|ref|YP_003400844.1|	-	3.2e-05	23.7	0.2	0.00086	19.1	0.1	2.2	1	1	1	2	2	2	1	IstB-like	ATP	binding	protein
Zot	PF05707.12	gi|284162221|ref|YP_003400844.1|	-	0.0041	16.8	0.0	0.0051	16.5	0.0	1.1	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_31	PF13614.6	gi|284162221|ref|YP_003400844.1|	-	0.0053	16.7	0.1	0.0075	16.2	0.1	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_35	PF14516.6	gi|284162221|ref|YP_003400844.1|	-	0.009	14.9	0.1	0.095	11.5	0.0	2.1	1	1	1	2	2	2	1	AAA-like	domain
SANT_DAMP1_like	PF16282.5	gi|284162221|ref|YP_003400844.1|	-	0.014	15.5	0.5	0.21	11.8	0.2	2.2	1	1	1	2	2	2	0	SANT/Myb-like	domain	of	DAMP1
CLP1_P	PF16575.5	gi|284162221|ref|YP_003400844.1|	-	0.014	15.2	0.1	0.052	13.3	0.0	1.8	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
CobU	PF02283.16	gi|284162221|ref|YP_003400844.1|	-	0.016	14.8	0.4	0.026	14.1	0.4	1.5	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA	PF00004.29	gi|284162221|ref|YP_003400844.1|	-	0.022	15.2	0.3	0.043	14.2	0.3	1.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|284162221|ref|YP_003400844.1|	-	0.024	15.2	0.8	0.041	14.4	0.8	1.6	1	1	0	1	1	1	0	ABC	transporter
PhoH	PF02562.16	gi|284162221|ref|YP_003400844.1|	-	0.04	13.4	0.4	0.073	12.5	0.3	1.5	1	1	0	1	1	1	0	PhoH-like	protein
TK	PF00265.18	gi|284162221|ref|YP_003400844.1|	-	0.048	13.5	0.9	0.086	12.7	0.9	1.5	1	1	0	1	1	1	0	Thymidine	kinase
AAA_22	PF13401.6	gi|284162221|ref|YP_003400844.1|	-	0.049	13.9	0.2	0.1	12.9	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|284162221|ref|YP_003400844.1|	-	0.11	12.2	0.1	0.25	11.0	0.1	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MobB	PF03205.14	gi|284162221|ref|YP_003400844.1|	-	0.12	12.3	0.2	0.87	9.5	0.2	2.2	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.6	gi|284162221|ref|YP_003400844.1|	-	0.18	12.3	0.5	0.52	10.9	0.5	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|284162221|ref|YP_003400844.1|	-	7.8	6.9	8.1	10	6.5	1.5	2.2	2	0	0	2	2	2	0	AAA	domain
DUF1664	PF07889.12	gi|284162222|ref|YP_003400845.1|	-	2.6e-05	24.3	25.4	0.088	12.8	5.8	4.7	1	1	3	4	4	4	3	Protein	of	unknown	function	(DUF1664)
WXG100	PF06013.12	gi|284162222|ref|YP_003400845.1|	-	7.4e-05	22.9	7.1	0.0027	17.9	0.3	4.6	2	2	1	4	4	4	1	Proteins	of	100	residues	with	WXG
DUF2935	PF11155.8	gi|284162222|ref|YP_003400845.1|	-	0.00023	21.5	6.5	0.11	12.8	1.9	3.8	1	1	2	3	3	3	1	Domain	of	unknown	function	(DUF2935)
AIP3	PF03915.13	gi|284162222|ref|YP_003400845.1|	-	0.00023	20.4	26.1	0.0094	15.1	8.3	2.1	2	0	0	2	2	2	2	Actin	interacting	protein	3
Snapin_Pallidin	PF14712.6	gi|284162222|ref|YP_003400845.1|	-	0.00034	21.0	38.3	0.17	12.3	4.2	4.5	1	1	3	4	4	4	3	Snapin/Pallidin
T3SSipB	PF16535.5	gi|284162222|ref|YP_003400845.1|	-	0.00042	20.8	17.4	0.0019	18.7	3.9	2.6	2	1	0	2	2	2	1	Type	III	cell	invasion	protein	SipB
DUF2353	PF09789.9	gi|284162222|ref|YP_003400845.1|	-	0.00046	19.6	10.6	0.00046	19.6	10.6	3.3	1	1	2	3	3	2	1	Uncharacterized	coiled-coil	protein	(DUF2353)
Syntaxin_2	PF14523.6	gi|284162222|ref|YP_003400845.1|	-	0.00061	20.1	24.3	0.1	13.0	8.7	3.2	2	1	1	3	3	3	2	Syntaxin-like	protein
Laminin_I	PF06008.14	gi|284162222|ref|YP_003400845.1|	-	0.001	18.8	35.8	0.0064	16.2	29.0	2.6	1	1	1	2	2	2	2	Laminin	Domain	I
DUF948	PF06103.11	gi|284162222|ref|YP_003400845.1|	-	0.0011	19.2	9.7	2	8.7	0.7	4.4	1	1	3	4	4	4	2	Bacterial	protein	of	unknown	function	(DUF948)
Seryl_tRNA_N	PF02403.22	gi|284162222|ref|YP_003400845.1|	-	0.0011	19.1	49.3	0.008	16.4	19.2	3.8	1	1	2	4	4	4	2	Seryl-tRNA	synthetase	N-terminal	domain
Spc7	PF08317.11	gi|284162222|ref|YP_003400845.1|	-	0.0013	17.7	52.8	0.0022	16.9	20.2	3.0	1	1	2	3	3	3	1	Spc7	kinetochore	protein
NPV_P10	PF05531.12	gi|284162222|ref|YP_003400845.1|	-	0.0021	18.5	5.6	9.5	6.8	0.1	4.3	2	1	1	3	3	3	0	Nucleopolyhedrovirus	P10	protein
DUF4200	PF13863.6	gi|284162222|ref|YP_003400845.1|	-	0.0031	17.9	65.4	0.036	14.5	21.5	4.7	1	1	4	5	5	5	2	Domain	of	unknown	function	(DUF4200)
LPP	PF04728.13	gi|284162222|ref|YP_003400845.1|	-	0.0051	17.2	10.5	12	6.4	0.4	5.4	3	2	3	6	6	5	0	Lipoprotein	leucine-zipper
DivIC	PF04977.15	gi|284162222|ref|YP_003400845.1|	-	0.0056	16.4	5.2	0.0056	16.4	5.2	5.9	1	1	3	5	5	4	1	Septum	formation	initiator
Sec34	PF04136.15	gi|284162222|ref|YP_003400845.1|	-	0.0079	16.1	24.9	0.42	10.5	3.3	3.9	1	1	4	5	5	5	3	Sec34-like	family
TMPIT	PF07851.13	gi|284162222|ref|YP_003400845.1|	-	0.012	14.9	35.8	0.4	9.9	10.5	3.4	1	1	3	4	4	4	0	TMPIT-like	protein
Laminin_II	PF06009.12	gi|284162222|ref|YP_003400845.1|	-	0.014	15.4	31.0	0.48	10.4	6.3	3.3	1	1	2	3	3	3	0	Laminin	Domain	II
Jnk-SapK_ap_N	PF09744.9	gi|284162222|ref|YP_003400845.1|	-	0.016	15.4	19.1	0.016	15.4	19.1	3.2	2	1	0	2	2	1	0	JNK_SAPK-associated	protein-1
AAA_13	PF13166.6	gi|284162222|ref|YP_003400845.1|	-	0.018	13.7	35.2	0.011	14.4	18.0	2.1	1	1	1	2	2	2	0	AAA	domain
Flagellar_rod	PF05149.12	gi|284162222|ref|YP_003400845.1|	-	0.019	14.4	2.1	0.019	14.4	2.1	4.1	1	1	3	4	4	3	0	Paraflagellar	rod	protein
Syntaxin-6_N	PF09177.11	gi|284162222|ref|YP_003400845.1|	-	0.023	15.2	32.1	0.055	14.0	5.5	4.2	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
Occludin_ELL	PF07303.13	gi|284162222|ref|YP_003400845.1|	-	0.025	15.3	37.9	0.091	13.5	8.8	4.4	1	1	4	5	5	5	0	Occludin	homology	domain
DUF4686	PF15742.5	gi|284162222|ref|YP_003400845.1|	-	0.027	13.6	52.4	1.3	8.0	30.5	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4686)
GAS	PF13851.6	gi|284162222|ref|YP_003400845.1|	-	0.029	13.7	59.0	0.081	12.3	19.8	3.0	1	1	2	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
DUF1771	PF08590.10	gi|284162222|ref|YP_003400845.1|	-	0.034	14.5	8.3	0.034	14.5	8.3	5.4	3	2	3	6	6	5	0	Domain	of	unknown	function	(DUF1771)
TPR_MLP1_2	PF07926.12	gi|284162222|ref|YP_003400845.1|	-	0.039	14.0	55.8	0.28	11.2	13.8	4.3	2	2	2	4	4	4	0	TPR/MLP1/MLP2-like	protein
DUF3450	PF11932.8	gi|284162222|ref|YP_003400845.1|	-	0.046	13.0	37.6	0.036	13.4	18.5	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
YkyA	PF10368.9	gi|284162222|ref|YP_003400845.1|	-	0.071	12.8	54.5	0.04	13.6	25.5	2.6	2	1	1	3	3	3	0	Putative	cell-wall	binding	lipoprotein
UCH	PF00443.29	gi|284162222|ref|YP_003400845.1|	-	0.13	11.7	0.0	0.26	10.8	0.0	1.7	1	1	0	1	1	1	0	Ubiquitin	carboxyl-terminal	hydrolase
COMP	PF11598.8	gi|284162222|ref|YP_003400845.1|	-	0.16	12.4	11.4	0.17	12.4	0.3	4.7	4	1	0	4	4	4	0	Cartilage	oligomeric	matrix	protein
HTH_DeoR	PF08220.12	gi|284162222|ref|YP_003400845.1|	-	0.17	11.6	3.4	0.74	9.6	0.1	3.4	3	1	0	3	3	3	0	DeoR-like	helix-turn-helix	domain
Atg14	PF10186.9	gi|284162222|ref|YP_003400845.1|	-	0.19	10.8	52.2	2.7	7.0	14.6	3.1	1	1	1	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
KASH_CCD	PF14662.6	gi|284162222|ref|YP_003400845.1|	-	0.3	10.9	49.8	0.069	13.0	19.4	2.7	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
FUSC	PF04632.12	gi|284162222|ref|YP_003400845.1|	-	0.38	9.2	19.2	0.32	9.5	7.2	2.1	1	1	1	2	2	2	0	Fusaric	acid	resistance	protein	family
GCIP	PF13324.6	gi|284162222|ref|YP_003400845.1|	-	0.42	10.2	12.9	0.081	12.5	1.0	2.3	2	0	0	2	2	2	0	Grap2	and	cyclin-D-interacting
Prefoldin_2	PF01920.20	gi|284162222|ref|YP_003400845.1|	-	0.46	10.5	49.6	0.35	10.9	1.1	5.6	1	1	3	5	5	5	0	Prefoldin	subunit
MHB	PF16525.5	gi|284162222|ref|YP_003400845.1|	-	0.83	9.9	5.7	4.8	7.5	0.1	3.1	2	2	1	3	3	3	0	Haemophore,	haem-binding
GldM_N	PF12081.8	gi|284162222|ref|YP_003400845.1|	-	0.92	9.6	27.5	12	5.9	5.0	3.9	1	1	1	2	2	2	0	GldM	N-terminal	domain
Filament	PF00038.21	gi|284162222|ref|YP_003400845.1|	-	1	8.9	51.6	0.91	9.0	7.8	3.0	1	1	1	2	2	2	0	Intermediate	filament	protein
BST2	PF16716.5	gi|284162222|ref|YP_003400845.1|	-	1.1	9.9	33.2	0.64	10.6	1.8	4.6	3	1	1	4	4	4	0	Bone	marrow	stromal	antigen	2
Uso1_p115_C	PF04871.13	gi|284162222|ref|YP_003400845.1|	-	1.1	9.7	51.5	3.2	8.2	21.7	3.8	1	1	2	3	3	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Syntaxin	PF00804.25	gi|284162222|ref|YP_003400845.1|	-	1.3	8.7	39.0	0.28	10.8	2.0	3.5	1	1	1	3	3	3	0	Syntaxin
DUF5486	PF17588.2	gi|284162222|ref|YP_003400845.1|	-	1.4	8.9	11.7	0.92	9.4	0.5	3.3	2	1	1	3	3	2	0	Family	of	unknown	function	(DUF5486)
CENP-H	PF05837.12	gi|284162222|ref|YP_003400845.1|	-	1.4	9.3	44.4	0.28	11.6	12.5	4.0	1	1	2	3	3	2	0	Centromere	protein	H	(CENP-H)
CENP-F_leu_zip	PF10473.9	gi|284162222|ref|YP_003400845.1|	-	1.6	8.8	57.2	0.66	10.0	24.3	3.5	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
HSBP1	PF06825.12	gi|284162222|ref|YP_003400845.1|	-	1.8	8.5	0.0	1.8	8.5	0.0	4.0	4	0	0	4	4	3	0	Heat	shock	factor	binding	protein	1
FlxA	PF14282.6	gi|284162222|ref|YP_003400845.1|	-	2	8.4	26.9	1.6	8.8	0.2	4.6	2	2	1	4	4	4	0	FlxA-like	protein
TraF_2	PF13729.6	gi|284162222|ref|YP_003400845.1|	-	2.2	7.6	4.6	8.5	5.7	0.3	2.9	1	1	1	2	2	2	0	F	plasmid	transfer	operon,	TraF,	protein
Ax_dynein_light	PF10211.9	gi|284162222|ref|YP_003400845.1|	-	2.2	8.2	55.5	2.1	8.3	6.0	4.3	1	1	2	4	4	4	0	Axonemal	dynein	light	chain
GCN5L1	PF06320.13	gi|284162222|ref|YP_003400845.1|	-	2.4	8.4	29.4	0.32	11.1	11.5	4.0	2	1	1	3	3	3	0	GCN5-like	protein	1	(GCN5L1)
CALCOCO1	PF07888.11	gi|284162222|ref|YP_003400845.1|	-	2.5	6.9	55.5	0.6	8.9	32.1	2.2	1	1	1	2	2	2	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
DUF4618	PF15397.6	gi|284162222|ref|YP_003400845.1|	-	2.6	7.4	37.8	1.6	8.1	3.0	3.6	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF4618)
Fez1	PF06818.15	gi|284162222|ref|YP_003400845.1|	-	2.7	8.4	47.0	18	5.7	24.7	2.6	1	1	1	2	2	2	0	Fez1
Spectrin	PF00435.21	gi|284162222|ref|YP_003400845.1|	-	3.1	8.4	36.0	2	8.9	7.8	4.0	1	1	4	5	5	5	0	Spectrin	repeat
Effector_1	PF04518.12	gi|284162222|ref|YP_003400845.1|	-	3.1	6.8	17.7	0.22	10.6	6.3	2.3	1	1	0	2	2	2	0	Effector	from	type	III	secretion	system
Dynein_C	PF18199.1	gi|284162222|ref|YP_003400845.1|	-	3.6	6.7	10.2	0.53	9.5	2.9	2.1	1	1	1	2	2	2	0	Dynein	heavy	chain	C-terminal	domain
DUF4407	PF14362.6	gi|284162222|ref|YP_003400845.1|	-	4	6.7	34.2	20	4.4	21.9	2.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
V-SNARE	PF05008.15	gi|284162222|ref|YP_003400845.1|	-	4	7.9	54.3	1.4	9.4	9.7	5.6	2	1	4	6	6	6	0	Vesicle	transport	v-SNARE	protein	N-terminus
EzrA	PF06160.12	gi|284162222|ref|YP_003400845.1|	-	4.7	5.3	45.6	3.1	5.8	20.3	2.4	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
Fmp27_WPPW	PF10359.9	gi|284162222|ref|YP_003400845.1|	-	4.9	5.9	39.1	0.18	10.6	9.7	3.1	2	1	0	2	2	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
HalX	PF08663.10	gi|284162222|ref|YP_003400845.1|	-	5.1	7.5	42.6	0.72	10.2	8.5	5.8	3	1	0	4	4	4	0	HalX	domain
PspA_IM30	PF04012.12	gi|284162222|ref|YP_003400845.1|	-	5.1	6.6	47.2	0.52	9.9	19.1	3.1	1	1	1	3	3	3	0	PspA/IM30	family
Cob_adeno_trans	PF01923.18	gi|284162222|ref|YP_003400845.1|	-	5.5	7.1	14.8	0.48	10.6	0.8	3.2	1	1	1	2	2	2	0	Cobalamin	adenosyltransferase
SpecificRecomb	PF10136.9	gi|284162222|ref|YP_003400845.1|	-	6.4	4.9	17.9	4.7	5.4	7.8	2.2	1	1	1	2	2	2	0	Site-specific	recombinase
DUF812	PF05667.11	gi|284162222|ref|YP_003400845.1|	-	8.1	5.2	56.1	0.53	9.1	18.7	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
Lectin_N	PF03954.14	gi|284162222|ref|YP_003400845.1|	-	9.2	6.0	17.0	4.1	7.2	1.5	3.5	3	1	0	3	3	3	0	Hepatic	lectin,	N-terminal	domain
TrkA_N	PF02254.18	gi|284162223|ref|YP_003400846.1|	-	1.3e-29	102.8	1.0	1.9e-29	102.2	0.5	1.6	2	0	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|284162223|ref|YP_003400846.1|	-	1.6e-19	69.5	0.6	4.8e-19	68.0	0.1	2.1	2	0	0	2	2	2	1	TrkA-C	domain
Ion_trans_2	PF07885.16	gi|284162223|ref|YP_003400846.1|	-	6.3e-14	51.7	11.8	1.1e-13	50.9	11.8	1.4	1	0	0	1	1	1	1	Ion	channel
MTS	PF05175.14	gi|284162223|ref|YP_003400846.1|	-	0.00025	20.7	0.0	0.00053	19.6	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	small	domain
ADH_zinc_N	PF00107.26	gi|284162223|ref|YP_003400846.1|	-	0.00081	19.4	0.9	1.7	8.7	0.1	2.8	2	1	0	2	2	2	2	Zinc-binding	dehydrogenase
NAD_binding_2	PF03446.15	gi|284162223|ref|YP_003400846.1|	-	0.0017	18.5	0.6	0.0039	17.4	0.2	1.8	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Methyltransf_25	PF13649.6	gi|284162223|ref|YP_003400846.1|	-	0.0044	17.7	0.0	0.0097	16.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
3HCDH_N	PF02737.18	gi|284162223|ref|YP_003400846.1|	-	0.032	14.1	0.0	0.06	13.2	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Methyltransf_31	PF13847.6	gi|284162223|ref|YP_003400846.1|	-	0.033	14.0	0.0	0.052	13.3	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284162223|ref|YP_003400846.1|	-	0.13	13.0	0.0	0.26	12.0	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Toprim_4	PF13662.6	gi|284162224|ref|YP_003400847.1|	-	3.8e-05	24.1	0.1	0.00016	22.1	0.1	1.9	1	1	0	1	1	1	1	Toprim	domain
Toprim	PF01751.22	gi|284162224|ref|YP_003400847.1|	-	5e-05	23.5	0.1	0.0011	19.1	0.1	2.2	1	1	0	1	1	1	1	Toprim	domain
PyrI	PF01948.18	gi|284162225|ref|YP_003400848.1|	-	6.4e-33	112.9	3.6	8.7e-33	112.4	3.6	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|284162225|ref|YP_003400848.1|	-	1.9e-14	53.3	3.4	1.9e-14	53.3	3.4	1.7	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-RING_7	PF02591.15	gi|284162225|ref|YP_003400848.1|	-	0.00038	20.6	0.5	0.003	17.7	0.1	2.3	2	0	0	2	2	2	1	C4-type	zinc	ribbon	domain
zf-CHCC	PF10276.9	gi|284162225|ref|YP_003400848.1|	-	0.01	15.8	0.1	0.019	15.0	0.1	1.4	1	0	0	1	1	1	0	Zinc-finger	domain
OTCace_N	PF02729.21	gi|284162226|ref|YP_003400849.1|	-	2.1e-52	177.1	0.0	4.4e-52	176.1	0.0	1.5	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|284162226|ref|YP_003400849.1|	-	6.4e-32	110.8	0.0	1.2e-31	110.0	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
DUF373	PF04123.13	gi|284162227|ref|YP_003400850.1|	-	6.1e-121	404.0	10.5	7.3e-121	403.7	10.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
Metallophos	PF00149.28	gi|284162228|ref|YP_003400851.1|	-	8.4e-09	36.2	0.9	1e-08	35.9	0.9	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|284162228|ref|YP_003400851.1|	-	9.8e-06	25.9	3.7	2.5e-05	24.5	3.7	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Aminotran_1_2	PF00155.21	gi|284162229|ref|YP_003400852.1|	-	2e-67	227.9	0.0	2.3e-67	227.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Citrate_synt	PF00285.21	gi|284162230|ref|YP_003400853.1|	-	3.1e-128	427.9	0.1	3.5e-128	427.7	0.1	1.0	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
Glycos_trans_3N	PF02885.17	gi|284162231|ref|YP_003400854.1|	-	2.6e-14	52.8	0.0	5.4e-14	51.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
PYNP_C	PF07831.13	gi|284162231|ref|YP_003400854.1|	-	1e-11	44.3	2.6	2.2e-11	43.2	0.1	2.6	3	0	0	3	3	3	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Glycos_transf_3	PF00591.21	gi|284162231|ref|YP_003400854.1|	-	8.5e-11	41.9	2.6	1.3e-09	38.0	2.6	2.3	1	1	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Molydop_binding	PF01568.21	gi|284162231|ref|YP_003400854.1|	-	0.0004	20.4	0.1	0.013	15.5	0.0	2.3	1	1	1	2	2	2	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|284162231|ref|YP_003400854.1|	-	0.021	15.0	0.0	0.061	13.5	0.0	1.8	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
Biotin_lipoyl_2	PF13533.6	gi|284162231|ref|YP_003400854.1|	-	0.078	12.8	0.1	0.46	10.4	0.0	2.3	2	0	0	2	2	2	0	Biotin-lipoyl	like
DUF3725	PF12523.8	gi|284162231|ref|YP_003400854.1|	-	0.22	11.8	0.2	30	5.0	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3725)
tRNA_deacylase	PF04414.12	gi|284162232|ref|YP_003400855.1|	-	3.8e-69	232.3	0.5	4.6e-69	232.0	0.5	1.1	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
Trp_oprn_chp	PF09534.10	gi|284162233|ref|YP_003400856.1|	-	0.013	15.3	1.1	0.016	15.0	1.1	1.0	1	0	0	1	1	1	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
Neurensin	PF14927.6	gi|284162233|ref|YP_003400856.1|	-	0.066	12.9	0.7	0.088	12.5	0.7	1.2	1	0	0	1	1	1	0	Neurensin
DUF2371	PF10177.9	gi|284162233|ref|YP_003400856.1|	-	0.14	12.3	6.0	0.089	13.0	0.7	2.0	1	1	1	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
DUF4307	PF14155.6	gi|284162233|ref|YP_003400856.1|	-	1.3	8.9	3.5	1.6	8.6	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
TMEM171	PF15471.6	gi|284162233|ref|YP_003400856.1|	-	3.2	6.6	5.0	3.8	6.4	1.1	2.0	1	1	1	2	2	2	0	Transmembrane	protein	family	171
Lon_2	PF13337.6	gi|284162235|ref|YP_003400858.1|	-	5.5e-10	38.4	0.1	9.1e-10	37.7	0.1	1.3	1	0	0	1	1	1	1	Putative	ATP-dependent	Lon	protease
HTH_38	PF13936.6	gi|284162235|ref|YP_003400858.1|	-	0.025	14.4	0.0	0.17	11.6	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|284162235|ref|YP_003400858.1|	-	0.031	14.4	0.0	0.15	12.1	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
CENP-K	PF11802.8	gi|284162236|ref|YP_003400859.1|	-	0.0093	15.6	2.0	0.01	15.4	2.0	1.0	1	0	0	1	1	1	1	Centromere-associated	protein	K
DUF1993	PF09351.10	gi|284162236|ref|YP_003400859.1|	-	0.051	13.7	0.3	0.068	13.3	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1993)
Peptidase_C23	PF05379.11	gi|284162236|ref|YP_003400859.1|	-	0.057	13.5	0.1	0.083	13.0	0.1	1.2	1	0	0	1	1	1	0	Carlavirus	endopeptidase
RHH_3	PF12651.7	gi|284162238|ref|YP_003400861.1|	-	5.6e-09	35.8	0.2	7.6e-09	35.4	0.2	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.21	gi|284162238|ref|YP_003400861.1|	-	8.9e-09	35.0	0.0	1.2e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
CopG_antitoxin	PF12441.8	gi|284162238|ref|YP_003400861.1|	-	0.14	12.7	0.0	0.21	12.2	0.0	1.2	1	0	0	1	1	1	0	CopG	antitoxin	of	type	II	toxin-antitoxin	system
CTP_transf_3	PF02348.19	gi|284162239|ref|YP_003400862.1|	-	0.0073	16.3	0.5	0.012	15.6	0.2	1.5	2	0	0	2	2	2	1	Cytidylyltransferase
HTH_27	PF13463.6	gi|284162239|ref|YP_003400862.1|	-	0.011	16.3	0.1	0.046	14.2	0.0	2.1	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_34	PF13601.6	gi|284162239|ref|YP_003400862.1|	-	0.017	15.3	0.1	0.23	11.7	0.1	2.6	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
TCTP	PF00838.17	gi|284162239|ref|YP_003400862.1|	-	0.024	15.0	0.1	0.062	13.6	0.1	1.7	1	0	0	1	1	1	0	Translationally	controlled	tumour	protein
HTH_24	PF13412.6	gi|284162239|ref|YP_003400862.1|	-	0.055	13.0	0.2	1.4	8.5	0.0	2.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|284162239|ref|YP_003400862.1|	-	0.086	12.9	0.1	0.56	10.3	0.0	2.3	3	1	0	3	3	3	0	Helix-turn-helix	domain
MFS_1	PF07690.16	gi|284162241|ref|YP_003400864.1|	-	2.3e-27	95.9	65.2	8.9e-17	61.0	33.4	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|284162241|ref|YP_003400864.1|	-	1.1e-23	83.8	38.8	3.7e-16	59.1	15.5	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
CBS	PF00571.28	gi|284162241|ref|YP_003400864.1|	-	7.2e-23	80.8	8.8	4.8e-10	39.7	0.0	4.6	5	0	0	5	5	5	3	CBS	domain
MFS_2	PF13347.6	gi|284162241|ref|YP_003400864.1|	-	6.1e-05	21.8	16.5	6.1e-05	21.8	16.5	2.6	1	1	1	2	2	2	1	MFS/sugar	transport	protein
EamA	PF00892.20	gi|284162242|ref|YP_003400865.1|	-	2.1e-43	147.8	40.6	6.7e-22	78.1	14.5	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|284162242|ref|YP_003400865.1|	-	0.0041	16.5	17.4	0.12	11.7	0.8	2.1	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
Radical_SAM	PF04055.21	gi|284162243|ref|YP_003400866.1|	-	1.1e-26	94.2	1.5	3.8e-26	92.5	0.2	2.3	3	0	0	3	3	3	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|284162243|ref|YP_003400866.1|	-	3.4e-21	75.1	0.5	6.7e-21	74.2	0.5	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.20	gi|284162243|ref|YP_003400866.1|	-	6.1e-09	35.7	0.2	1.3e-08	34.7	0.2	1.5	1	0	0	1	1	1	1	TRAM	domain
DHHA1	PF02272.19	gi|284162244|ref|YP_003400867.1|	-	1.5e-18	67.6	0.0	3.6e-18	66.3	0.0	1.7	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.20	gi|284162244|ref|YP_003400867.1|	-	0.00087	19.5	0.1	0.0015	18.7	0.1	1.4	1	0	0	1	1	1	1	DHH	family
TF_Zn_Ribbon	PF08271.12	gi|284162246|ref|YP_003400869.1|	-	1.2e-07	31.1	1.5	2.2e-07	30.3	1.5	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.6	gi|284162246|ref|YP_003400869.1|	-	0.00038	20.8	0.1	0.00054	20.3	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.7	gi|284162246|ref|YP_003400869.1|	-	0.00047	20.1	0.2	0.00074	19.4	0.2	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-RRN7	PF11781.8	gi|284162246|ref|YP_003400869.1|	-	0.0038	16.9	3.4	0.16	11.7	3.4	2.2	1	1	0	1	1	1	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Zn-ribbon_8	PF09723.10	gi|284162246|ref|YP_003400869.1|	-	0.017	15.3	1.8	4.9	7.4	0.2	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
Elf1	PF05129.13	gi|284162246|ref|YP_003400869.1|	-	0.025	14.6	0.1	0.025	14.6	0.1	1.7	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
MCM_OB	PF17207.3	gi|284162246|ref|YP_003400869.1|	-	0.031	14.1	0.1	0.033	14.1	0.1	1.1	1	0	0	1	1	1	0	MCM	OB	domain
zf-ribbon_3	PF13248.6	gi|284162246|ref|YP_003400869.1|	-	0.053	12.9	2.0	2.4	7.7	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|284162246|ref|YP_003400869.1|	-	0.06	13.3	1.3	0.22	11.5	1.3	1.9	1	1	0	1	1	1	0	Nudix	N-terminal
PADR1	PF08063.12	gi|284162246|ref|YP_003400869.1|	-	0.064	13.1	1.6	0.19	11.5	1.4	1.8	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
eIF-5_eIF-2B	PF01873.17	gi|284162246|ref|YP_003400869.1|	-	0.11	12.4	0.4	0.17	11.8	0.4	1.4	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
zinc_ribbon_13	PF09855.9	gi|284162246|ref|YP_003400869.1|	-	0.14	12.4	1.6	12	6.2	0.4	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-Mss51	PF13824.6	gi|284162246|ref|YP_003400869.1|	-	0.14	12.3	0.7	0.31	11.2	0.7	1.7	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
TFIIS_C	PF01096.18	gi|284162246|ref|YP_003400869.1|	-	0.16	11.9	2.0	11	5.9	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
OrfB_Zn_ribbon	PF07282.11	gi|284162246|ref|YP_003400869.1|	-	0.19	11.7	2.1	0.2	11.6	0.5	1.8	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
A2L_zn_ribbon	PF08792.10	gi|284162246|ref|YP_003400869.1|	-	0.3	10.9	5.1	7.5	6.4	5.1	2.2	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|284162246|ref|YP_003400869.1|	-	0.42	10.6	3.3	1.5	8.9	0.1	2.7	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
Prim_Zn_Ribbon	PF08273.12	gi|284162246|ref|YP_003400869.1|	-	0.5	10.7	6.4	5.3	7.4	6.4	2.1	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
Rubredoxin_2	PF18073.1	gi|284162246|ref|YP_003400869.1|	-	0.83	9.4	5.8	1.8	8.3	0.8	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
GTP_cyclohydro2	PF00925.20	gi|284162247|ref|YP_003400870.1|	-	3.1e-68	228.5	0.0	4.7e-68	227.9	0.0	1.2	1	0	0	1	1	1	1	GTP	cyclohydrolase	II
DHBP_synthase	PF00926.19	gi|284162247|ref|YP_003400870.1|	-	7.1e-30	104.0	0.0	1.3e-29	103.2	0.0	1.4	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
ALO	PF04030.14	gi|284162250|ref|YP_003400873.1|	-	0.027	14.3	0.1	0.027	14.3	0.1	1.0	1	0	0	1	1	1	0	D-arabinono-1,4-lactone	oxidase
Rrf2	PF02082.20	gi|284162251|ref|YP_003400874.1|	-	0.00055	20.2	0.1	0.0013	19.0	0.1	1.6	1	1	0	1	1	1	1	Transcriptional	regulator
HTH_24	PF13412.6	gi|284162251|ref|YP_003400874.1|	-	0.0078	15.7	2.2	0.011	15.3	2.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|284162251|ref|YP_003400874.1|	-	0.02	14.8	0.3	0.03	14.2	0.3	1.2	1	0	0	1	1	1	0	MarR	family
Img2	PF05046.14	gi|284162251|ref|YP_003400874.1|	-	0.042	14.2	0.4	0.055	13.8	0.4	1.2	1	0	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
Trm56	PF01994.16	gi|284162251|ref|YP_003400874.1|	-	0.07	13.1	0.3	0.088	12.7	0.3	1.2	1	0	0	1	1	1	0	tRNA	ribose	2'-O-methyltransferase,	aTrm56
DUF5615	PF18480.1	gi|284162253|ref|YP_003400876.1|	-	0.038	13.8	0.0	0.053	13.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5615)
RHH_3	PF12651.7	gi|284162254|ref|YP_003400877.1|	-	3.3e-05	23.8	2.4	0.00016	21.5	0.8	2.6	2	1	0	2	2	2	1	Ribbon-helix-helix	domain
DUF1651	PF07864.11	gi|284162254|ref|YP_003400877.1|	-	0.006	16.9	0.1	0.0084	16.4	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1651)
B56	PF01603.20	gi|284162254|ref|YP_003400877.1|	-	0.026	13.5	1.0	0.029	13.3	1.0	1.0	1	0	0	1	1	1	0	Protein	phosphatase	2A	regulatory	B	subunit	(B56	family)
DUF3631	PF12307.8	gi|284162254|ref|YP_003400877.1|	-	0.035	14.3	0.1	0.04	14.1	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3631)
CcdA	PF07362.12	gi|284162254|ref|YP_003400877.1|	-	0.076	13.4	0.2	0.15	12.5	0.2	1.7	1	1	0	1	1	1	0	Post-segregation	antitoxin	CcdA
OrfB_Zn_ribbon	PF07282.11	gi|284162256|ref|YP_003400879.1|	-	2.9e-18	65.5	0.0	6e-18	64.5	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OmpH	PF03938.14	gi|284162256|ref|YP_003400879.1|	-	0.0098	16.2	4.6	0.79	10.0	4.7	2.3	1	1	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
Phosphatase	PF15698.5	gi|284162256|ref|YP_003400879.1|	-	0.2	10.7	0.0	0.35	10.0	0.0	1.3	1	0	0	1	1	1	0	Phosphatase
Resolvase	PF00239.21	gi|284162257|ref|YP_003400880.1|	-	4.3e-27	95.0	0.1	2.4e-26	92.6	0.5	1.9	2	0	0	2	2	2	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.7	gi|284162257|ref|YP_003400880.1|	-	2.1e-11	43.8	0.1	6.5e-11	42.3	0.1	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
RE_TdeIII	PF09520.10	gi|284162257|ref|YP_003400880.1|	-	0.055	13.1	0.0	0.081	12.6	0.0	1.3	1	0	0	1	1	1	0	Type	II	restriction	endonuclease,	TdeIII
HTH_23	PF13384.6	gi|284162257|ref|YP_003400880.1|	-	0.076	12.8	0.0	0.17	11.7	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
OsmC	PF02566.19	gi|284162257|ref|YP_003400880.1|	-	0.17	12.4	0.0	7.5	7.1	0.0	2.2	2	0	0	2	2	2	0	OsmC-like	protein
RHH_6	PF16762.5	gi|284162258|ref|YP_003400881.1|	-	8.1e-07	29.6	0.0	9.8e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.21	gi|284162258|ref|YP_003400881.1|	-	0.12	12.3	0.0	0.97	9.5	0.0	2.0	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
VWA_CoxE	PF05762.14	gi|284162261|ref|YP_003400884.1|	-	0.0014	18.1	0.1	0.0096	15.3	0.1	1.9	1	1	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.6	gi|284162261|ref|YP_003400884.1|	-	0.013	16.1	0.2	0.99	10.1	0.2	2.7	1	1	0	1	1	1	0	von	Willebrand	factor	type	A	domain
DUF563	PF04577.14	gi|284162261|ref|YP_003400884.1|	-	0.12	12.5	0.1	0.49	10.5	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF563)
ThiF	PF00899.21	gi|284162263|ref|YP_003400886.1|	-	1.1e-09	38.0	0.0	1.6e-09	37.5	0.0	1.1	1	0	0	1	1	1	1	ThiF	family
MGDG_synth	PF06925.11	gi|284162263|ref|YP_003400886.1|	-	0.097	12.8	0.0	0.13	12.3	0.0	1.3	1	0	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
DUF3876	PF12992.7	gi|284162263|ref|YP_003400886.1|	-	0.16	12.1	0.1	0.41	10.8	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3876)
DUF1416	PF07210.12	gi|284162264|ref|YP_003400887.1|	-	0.18	11.7	0.1	0.46	10.4	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1416)
Zn-ribbon_8	PF09723.10	gi|284162265|ref|YP_003400888.1|	-	0.0036	17.4	10.4	0.22	11.7	0.0	2.7	2	1	0	2	2	2	1	Zinc	ribbon	domain
PCAF_N	PF06466.11	gi|284162265|ref|YP_003400888.1|	-	0.024	14.2	1.5	0.024	14.2	1.5	1.6	1	1	0	1	1	1	0	PCAF	(P300/CBP-associated	factor)	N-terminal	domain
DZR	PF12773.7	gi|284162265|ref|YP_003400888.1|	-	0.14	12.2	10.0	3.2	7.9	0.2	2.6	1	1	2	3	3	3	0	Double	zinc	ribbon
MMR_HSR1_C	PF08438.10	gi|284162265|ref|YP_003400888.1|	-	0.16	12.6	0.4	1.9	9.1	0.2	2.0	2	0	0	2	2	2	0	GTPase	of	unknown	function	C-terminal
Nudix_N_2	PF14803.6	gi|284162265|ref|YP_003400888.1|	-	0.25	11.3	19.2	1.4	8.9	0.0	3.4	3	0	0	3	3	3	0	Nudix	N-terminal
zinc_ribbon_2	PF13240.6	gi|284162265|ref|YP_003400888.1|	-	0.27	11.0	0.4	0.27	11.0	0.4	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|284162265|ref|YP_003400888.1|	-	0.4	10.1	10.7	0.32	10.5	0.4	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
DpnI	PF06044.12	gi|284162265|ref|YP_003400888.1|	-	0.46	10.1	3.1	0.22	11.1	0.9	1.6	1	1	0	1	1	1	0	Dam-replacing	family
NOB1_Zn_bind	PF08772.11	gi|284162265|ref|YP_003400888.1|	-	0.62	10.3	0.1	0.62	10.3	0.1	3.2	2	1	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-piccolo	PF05715.13	gi|284162265|ref|YP_003400888.1|	-	0.87	9.8	10.9	1.3	9.3	5.9	2.4	1	1	1	2	2	2	0	Piccolo	Zn-finger
Cys_rich_CPXG	PF14255.6	gi|284162265|ref|YP_003400888.1|	-	1.8	8.6	12.6	20	5.2	7.0	2.6	1	1	1	2	2	2	0	Cysteine-rich	CPXCG
ADK_lid	PF05191.14	gi|284162265|ref|YP_003400888.1|	-	8.2	6.5	11.4	11	6.1	0.4	3.2	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
AAA_14	PF13173.6	gi|284162267|ref|YP_003400890.1|	-	4.8e-06	26.6	0.1	1e-05	25.5	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284162267|ref|YP_003400890.1|	-	0.0033	17.7	0.1	0.46	10.8	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
HTH_5	PF01022.20	gi|284162267|ref|YP_003400890.1|	-	0.0069	16.2	0.1	0.11	12.4	0.1	2.6	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
AAA_16	PF13191.6	gi|284162267|ref|YP_003400890.1|	-	0.03	14.7	0.1	11	6.4	0.1	2.5	1	1	1	2	2	2	0	AAA	ATPase	domain
DED	PF01335.21	gi|284162267|ref|YP_003400890.1|	-	0.042	14.2	0.3	1.8	8.9	0.0	3.4	3	1	0	3	3	3	0	Death	effector	domain
AsiA	PF09010.10	gi|284162267|ref|YP_003400890.1|	-	0.044	13.9	0.1	0.097	12.8	0.1	1.5	1	0	0	1	1	1	0	Anti-Sigma	Factor	A
AAA	PF00004.29	gi|284162267|ref|YP_003400890.1|	-	0.082	13.3	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF234	PF03008.14	gi|284162267|ref|YP_003400890.1|	-	8.3	6.9	8.1	69	4.0	5.3	3.2	2	1	0	2	2	2	0	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.6	gi|284162268|ref|YP_003400891.1|	-	0.00078	19.5	0.0	0.0011	19.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284162269|ref|YP_003400892.1|	-	1.8e-11	44.4	0.0	3.5e-11	43.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|284162269|ref|YP_003400892.1|	-	4.4e-11	43.5	0.0	5.2e-10	40.0	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|284162269|ref|YP_003400892.1|	-	3.3e-08	34.0	0.0	5.8e-08	33.2	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|284162269|ref|YP_003400892.1|	-	3.8e-06	27.0	1.4	0.00012	22.1	0.1	2.5	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_30	PF13604.6	gi|284162269|ref|YP_003400892.1|	-	0.00016	21.5	0.0	0.00024	20.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.13	gi|284162269|ref|YP_003400892.1|	-	0.0014	17.8	0.0	0.0024	17.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
TniB	PF05621.11	gi|284162269|ref|YP_003400892.1|	-	0.0028	17.1	0.0	0.0051	16.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	TniB	protein
AAA_7	PF12775.7	gi|284162269|ref|YP_003400892.1|	-	0.0031	17.1	0.0	0.0054	16.3	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
AAA_33	PF13671.6	gi|284162269|ref|YP_003400892.1|	-	0.02	15.1	0.0	0.036	14.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|284162269|ref|YP_003400892.1|	-	0.022	15.1	0.1	0.052	13.9	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.12	gi|284162269|ref|YP_003400892.1|	-	0.044	13.5	0.1	4.1	7.1	0.0	2.3	1	1	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DEAD	PF00270.29	gi|284162269|ref|YP_003400892.1|	-	0.055	13.2	0.5	10	5.8	0.1	2.2	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
IstB_IS21	PF01695.17	gi|284162269|ref|YP_003400892.1|	-	0.067	12.9	0.0	2.3	7.9	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ResIII	PF04851.15	gi|284162269|ref|YP_003400892.1|	-	0.08	12.9	0.0	0.78	9.7	0.0	2.1	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
NACHT	PF05729.12	gi|284162269|ref|YP_003400892.1|	-	0.11	12.4	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_5	PF07728.14	gi|284162269|ref|YP_003400892.1|	-	0.11	12.5	0.3	0.43	10.6	0.3	2.0	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
TsaE	PF02367.17	gi|284162269|ref|YP_003400892.1|	-	0.15	12.1	0.0	0.28	11.2	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
TrwB_AAD_bind	PF10412.9	gi|284162269|ref|YP_003400892.1|	-	0.18	10.7	0.0	0.38	9.6	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.6	gi|284162271|ref|YP_003400894.1|	-	1.1e-05	25.7	0.0	2.1e-05	24.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Cdc6_C	PF09079.11	gi|284162271|ref|YP_003400894.1|	-	2.5e-05	24.2	0.0	8.6e-05	22.4	0.0	2.0	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
NACHT	PF05729.12	gi|284162271|ref|YP_003400894.1|	-	3.2e-05	23.9	0.0	6.2e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA	PF00004.29	gi|284162271|ref|YP_003400894.1|	-	0.0018	18.7	0.1	0.0062	17.0	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.6	gi|284162271|ref|YP_003400894.1|	-	0.0065	16.8	0.0	0.014	15.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|284162271|ref|YP_003400894.1|	-	0.011	16.1	0.0	0.15	12.5	0.0	2.4	1	1	0	1	1	1	0	AAA	ATPase	domain
UvrD-helicase	PF00580.21	gi|284162271|ref|YP_003400894.1|	-	0.031	13.8	0.0	0.14	11.7	0.0	1.8	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
RP854	PF17460.2	gi|284162271|ref|YP_003400894.1|	-	0.039	13.7	0.0	0.082	12.7	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	RP854
AAA_assoc_2	PF16193.5	gi|284162271|ref|YP_003400894.1|	-	0.077	13.3	0.0	0.32	11.4	0.0	2.0	2	0	0	2	2	2	0	AAA	C-terminal	domain
ATPase	PF06745.13	gi|284162271|ref|YP_003400894.1|	-	0.14	11.5	1.0	9.1	5.6	0.1	2.3	1	1	1	2	2	2	0	KaiC
AAA_30	PF13604.6	gi|284162271|ref|YP_003400894.1|	-	0.21	11.3	0.0	0.37	10.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
FliS	PF02561.14	gi|284162272|ref|YP_003400895.1|	-	0.037	14.3	0.3	0.88	9.9	0.1	2.3	1	1	1	2	2	2	0	Flagellar	protein	FliS
PhageMin_Tail	PF10145.9	gi|284162272|ref|YP_003400895.1|	-	0.12	12.3	0.0	0.43	10.4	0.0	1.9	2	0	0	2	2	2	0	Phage-related	minor	tail	protein
Glyco_hydro_115	PF15979.5	gi|284162272|ref|YP_003400895.1|	-	0.13	11.7	0.1	0.47	9.9	0.1	1.7	2	0	0	2	2	2	0	Glycosyl	hydrolase	family	115
DUF29	PF01724.16	gi|284162272|ref|YP_003400895.1|	-	0.13	12.5	2.2	1.8	8.8	0.1	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	DUF29
IF2_N	PF04760.15	gi|284162272|ref|YP_003400895.1|	-	0.4	10.5	5.1	1.8	8.4	0.3	3.5	4	0	0	4	4	4	0	Translation	initiation	factor	IF-2,	N-terminal	region
SpoU_sub_bind	PF08032.12	gi|284162272|ref|YP_003400895.1|	-	5	7.5	5.8	29	5.0	0.1	3.1	3	1	1	4	4	4	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
UPF0175	PF03683.13	gi|284162274|ref|YP_003400897.1|	-	2.6e-13	49.4	0.0	4.7e-13	48.6	0.0	1.4	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.21	gi|284162274|ref|YP_003400897.1|	-	3.8e-07	29.8	2.9	1.5e-05	24.7	1.0	2.9	2	1	1	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
HTH_23	PF13384.6	gi|284162274|ref|YP_003400897.1|	-	0.033	14.0	0.1	1.8	8.5	0.0	2.4	1	1	1	2	2	2	0	Homeodomain-like	domain
HTH_24	PF13412.6	gi|284162274|ref|YP_003400897.1|	-	0.038	13.5	0.0	1.4	8.6	0.0	2.3	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
GCV_H	PF01597.19	gi|284162275|ref|YP_003400898.1|	-	0.0037	17.2	0.2	0.0044	16.9	0.2	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
UPF0175	PF03683.13	gi|284162276|ref|YP_003400899.1|	-	2.9e-11	42.9	0.8	1.3e-10	40.8	0.5	1.9	1	1	1	2	2	2	1	Uncharacterised	protein	family	(UPF0175)
DUF3368	PF11848.8	gi|284162277|ref|YP_003400900.1|	-	0.029	14.1	0.1	0.14	12.0	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3368)
UPF0175	PF03683.13	gi|284162278|ref|YP_003400901.1|	-	6.5e-12	45.0	1.2	8.2e-12	44.7	1.1	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.21	gi|284162278|ref|YP_003400901.1|	-	0.021	14.8	0.9	0.021	14.8	0.9	2.9	3	1	1	4	4	4	0	Ribbon-helix-helix	protein,	copG	family
SurA_N	PF09312.11	gi|284162278|ref|YP_003400901.1|	-	0.022	14.8	0.4	2.9	8.0	0.0	2.1	1	1	0	2	2	2	0	SurA	N-terminal	domain
UPF0270	PF06794.12	gi|284162278|ref|YP_003400901.1|	-	0.035	14.2	0.1	0.073	13.1	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0270)
RHH_4	PF13467.6	gi|284162278|ref|YP_003400901.1|	-	0.042	13.7	0.1	1.6	8.7	0.0	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
RPAP1_C	PF08620.10	gi|284162278|ref|YP_003400901.1|	-	0.11	12.6	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	RPAP1-like,	C-terminal
DUF3368	PF11848.8	gi|284162279|ref|YP_003400902.1|	-	2.2e-07	30.5	0.1	1.5e-06	27.9	0.0	2.3	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF3368)
PIN_6	PF17146.4	gi|284162279|ref|YP_003400902.1|	-	0.0048	17.4	0.0	0.0079	16.7	0.0	1.3	1	0	0	1	1	1	1	PIN	domain	of	ribonuclease
UPF0175	PF03683.13	gi|284162280|ref|YP_003400903.1|	-	1.2e-16	60.2	0.9	1.9e-16	59.5	0.8	1.5	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.21	gi|284162280|ref|YP_003400903.1|	-	2.9e-09	36.5	3.7	7.2e-09	35.3	0.7	2.3	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
CopG_antitoxin	PF12441.8	gi|284162280|ref|YP_003400903.1|	-	9.1e-05	22.9	0.3	0.00022	21.7	0.1	1.7	1	1	1	2	2	2	1	CopG	antitoxin	of	type	II	toxin-antitoxin	system
RHH_3	PF12651.7	gi|284162280|ref|YP_003400903.1|	-	0.016	15.2	1.7	0.031	14.2	0.4	1.9	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
HTH_psq	PF05225.16	gi|284162280|ref|YP_003400903.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
ANT	PF03374.14	gi|284162280|ref|YP_003400903.1|	-	0.13	12.6	0.3	2.2	8.6	0.1	2.0	1	1	1	2	2	2	0	Phage	antirepressor	protein	KilAC	domain
Resolvase	PF00239.21	gi|284162281|ref|YP_003400904.1|	-	2.5e-28	99.0	0.0	6.4e-28	97.7	0.0	1.6	2	0	0	2	2	2	1	Resolvase,	N	terminal	domain
Glyco_hydro_97	PF10566.9	gi|284162281|ref|YP_003400904.1|	-	0.00011	21.6	0.5	0.0033	16.8	0.0	2.2	2	0	0	2	2	2	2	Glycoside	hydrolase	97
Serum_albumin	PF00273.20	gi|284162281|ref|YP_003400904.1|	-	0.095	12.5	0.1	0.25	11.1	0.1	1.6	2	0	0	2	2	2	0	Serum	albumin	family
GHL6	PF14871.6	gi|284162281|ref|YP_003400904.1|	-	0.11	12.6	0.0	0.94	9.6	0.0	2.3	2	1	0	2	2	2	0	Hypothetical	glycosyl	hydrolase	6
UPF0175	PF03683.13	gi|284162282|ref|YP_003400905.1|	-	5e-15	55.0	1.2	6.9e-15	54.5	1.2	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.21	gi|284162282|ref|YP_003400905.1|	-	0.065	13.2	0.4	0.065	13.2	0.4	2.8	2	2	2	4	4	4	0	Ribbon-helix-helix	protein,	copG	family
DUF3368	PF11848.8	gi|284162283|ref|YP_003400906.1|	-	5.7e-14	51.6	1.6	3.2e-12	46.0	0.1	2.9	3	1	0	3	3	3	2	Domain	of	unknown	function	(DUF3368)
PIN_5	PF08745.11	gi|284162283|ref|YP_003400906.1|	-	0.07	12.5	0.4	0.46	9.9	0.1	2.2	3	0	0	3	3	3	0	PINc	domain	ribonuclease
Amidohydro_3	PF07969.11	gi|284162284|ref|YP_003400907.1|	-	3e-114	383.1	0.0	3.9e-114	382.7	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|284162284|ref|YP_003400907.1|	-	4e-17	62.5	0.0	2.2e-12	47.0	0.0	2.7	2	1	0	2	2	2	2	Amidohydrolase	family
Cecropin	PF00272.19	gi|284162284|ref|YP_003400907.1|	-	0.043	13.5	0.2	0.11	12.3	0.2	1.6	1	0	0	1	1	1	0	Cecropin	family
FliG_C	PF01706.16	gi|284162284|ref|YP_003400907.1|	-	0.079	13.2	0.1	0.16	12.2	0.1	1.4	1	0	0	1	1	1	0	FliG	C-terminal	domain
HAD_2	PF13419.6	gi|284162285|ref|YP_003400908.1|	-	4.7e-28	98.5	0.0	6e-28	98.1	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|284162285|ref|YP_003400908.1|	-	1.8e-13	51.3	0.0	3.2e-08	34.1	0.0	2.1	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|284162285|ref|YP_003400908.1|	-	8.2e-09	36.1	0.0	1.1e-08	35.7	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
CTK3	PF12243.8	gi|284162285|ref|YP_003400908.1|	-	0.0049	16.9	0.0	0.027	14.5	0.0	1.9	2	0	0	2	2	2	1	CTD	kinase	subunit	gamma	CTK3
Put_Phosphatase	PF06888.12	gi|284162285|ref|YP_003400908.1|	-	0.024	14.0	0.0	0.037	13.4	0.0	1.2	1	0	0	1	1	1	0	Putative	Phosphatase
5_nucleotid	PF05761.14	gi|284162285|ref|YP_003400908.1|	-	0.082	11.8	0.0	0.095	11.6	0.0	1.2	1	0	0	1	1	1	0	5'	nucleotidase	family
ATPase_2	PF01637.18	gi|284162286|ref|YP_003400909.1|	-	7.9e-17	61.9	5.4	7.9e-17	61.9	5.4	1.8	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|284162286|ref|YP_003400909.1|	-	9.9e-07	28.9	0.2	0.0044	17.1	0.1	2.6	1	1	1	2	2	2	2	AAA	domain
AAA_35	PF14516.6	gi|284162286|ref|YP_003400909.1|	-	6.8e-05	21.9	0.1	0.00029	19.8	0.1	1.8	1	1	0	1	1	1	1	AAA-like	domain
AAA_16	PF13191.6	gi|284162286|ref|YP_003400909.1|	-	0.00015	22.2	0.0	0.0003	21.2	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
MecA	PF05389.12	gi|284162286|ref|YP_003400909.1|	-	0.00033	20.4	0.3	0.00051	19.7	0.3	1.2	1	0	0	1	1	1	1	Negative	regulator	of	genetic	competence	(MecA)
AAA_22	PF13401.6	gi|284162286|ref|YP_003400909.1|	-	0.0079	16.5	0.0	0.023	14.9	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|284162286|ref|YP_003400909.1|	-	0.047	14.1	0.1	0.3	11.5	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Radical_SAM	PF04055.21	gi|284162287|ref|YP_003400910.1|	-	4.9e-20	72.6	0.0	7.5e-20	72.0	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284162287|ref|YP_003400910.1|	-	4.6e-05	23.7	0.0	6.9e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF1028	PF06267.12	gi|284162289|ref|YP_003400912.1|	-	4.1e-63	212.7	0.0	4.5e-63	212.5	0.0	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
ATPase	PF06745.13	gi|284162290|ref|YP_003400913.1|	-	7e-12	45.2	1.6	4.6e-11	42.5	1.7	1.9	1	1	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|284162290|ref|YP_003400913.1|	-	3.9e-05	22.5	0.8	4.7e-05	22.2	0.8	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
DUF835	PF05763.12	gi|284162290|ref|YP_003400913.1|	-	4.2e-05	23.3	3.0	6.3e-05	22.7	1.8	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF835)
DUF2075	PF09848.9	gi|284162290|ref|YP_003400913.1|	-	0.00037	19.8	0.1	0.00083	18.7	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.6	gi|284162290|ref|YP_003400913.1|	-	0.00061	20.1	0.1	0.0014	18.9	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|284162290|ref|YP_003400913.1|	-	0.00068	18.9	0.0	0.0013	18.0	0.0	1.5	1	0	0	1	1	1	1	NB-ARC	domain
AAA_18	PF13238.6	gi|284162290|ref|YP_003400913.1|	-	0.0018	18.8	0.0	0.0028	18.2	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|284162290|ref|YP_003400913.1|	-	0.0021	18.5	0.3	0.0039	17.6	0.3	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.18	gi|284162290|ref|YP_003400913.1|	-	0.0034	17.2	0.1	0.0091	15.8	0.0	1.7	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.12	gi|284162290|ref|YP_003400913.1|	-	0.0034	17.3	0.3	0.04	13.8	0.0	2.4	2	1	0	2	2	2	1	NACHT	domain
AAA_16	PF13191.6	gi|284162290|ref|YP_003400913.1|	-	0.0073	16.7	0.0	0.011	16.1	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|284162290|ref|YP_003400913.1|	-	0.023	15.1	0.1	0.13	12.6	0.0	2.3	2	2	1	3	3	3	0	RNA	helicase
AAA_14	PF13173.6	gi|284162290|ref|YP_003400913.1|	-	0.044	13.8	0.8	0.43	10.6	0.8	2.1	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|284162290|ref|YP_003400913.1|	-	0.059	12.6	0.0	0.13	11.5	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
efThoc1	PF11957.8	gi|284162290|ref|YP_003400913.1|	-	0.061	12.0	0.5	0.1	11.3	0.1	1.5	2	0	0	2	2	2	0	THO	complex	subunit	1	transcription	elongation	factor
MMR_HSR1	PF01926.23	gi|284162290|ref|YP_003400913.1|	-	0.065	13.3	0.9	0.13	12.3	0.9	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_24	PF13479.6	gi|284162290|ref|YP_003400913.1|	-	0.37	10.5	3.0	0.68	9.6	0.2	2.3	1	1	1	2	2	2	0	AAA	domain
HxlR	PF01638.17	gi|284162291|ref|YP_003400914.1|	-	1.7e-08	34.2	0.3	2.4e-08	33.7	0.3	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_45	PF14947.6	gi|284162291|ref|YP_003400914.1|	-	0.0019	18.1	0.3	0.0033	17.4	0.3	1.4	1	1	0	1	1	1	1	Winged	helix-turn-helix
DUF505	PF04458.12	gi|284162291|ref|YP_003400914.1|	-	0.0026	16.2	0.2	0.003	16.0	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
DUF1495	PF07381.11	gi|284162291|ref|YP_003400914.1|	-	0.041	13.7	0.0	0.8	9.6	0.0	2.1	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
PadR	PF03551.14	gi|284162291|ref|YP_003400914.1|	-	0.044	13.8	0.2	0.084	12.9	0.1	1.5	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
AAA_14	PF13173.6	gi|284162295|ref|YP_003400918.1|	-	4.3e-11	43.0	0.2	1.9e-10	40.9	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|284162295|ref|YP_003400918.1|	-	1.6e-06	28.5	0.2	0.00026	21.2	0.1	2.5	1	1	1	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|284162295|ref|YP_003400918.1|	-	0.0022	18.4	0.0	0.0065	16.9	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|284162295|ref|YP_003400918.1|	-	0.0075	16.2	1.3	1.8	8.4	0.0	2.8	3	0	0	3	3	3	2	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|284162295|ref|YP_003400918.1|	-	0.015	15.6	0.3	1.7	9.0	0.1	2.5	1	1	0	2	2	2	0	AAA	ATPase	domain
TrmB	PF01978.19	gi|284162295|ref|YP_003400918.1|	-	0.019	14.8	0.2	0.05	13.5	0.0	1.8	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
TK	PF00265.18	gi|284162295|ref|YP_003400918.1|	-	0.036	13.9	0.0	0.069	13.0	0.0	1.4	1	0	0	1	1	1	0	Thymidine	kinase
AAA_19	PF13245.6	gi|284162295|ref|YP_003400918.1|	-	0.037	14.4	0.0	0.078	13.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|284162295|ref|YP_003400918.1|	-	0.043	13.5	0.0	0.09	12.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.18	gi|284162295|ref|YP_003400918.1|	-	0.12	12.1	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
STT3	PF02516.14	gi|284162296|ref|YP_003400919.1|	-	5.8e-18	65.1	37.4	1.9e-16	60.1	37.4	2.7	1	1	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
Mannosyl_trans4	PF15971.5	gi|284162296|ref|YP_003400919.1|	-	1.2e-05	25.2	6.8	1.2e-05	25.2	6.8	1.8	2	0	0	2	2	2	1	DolP-mannose	mannosyltransferase
Glycos_transf_2	PF00535.26	gi|284162297|ref|YP_003400920.1|	-	1.4e-30	106.3	0.0	2.3e-30	105.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162297|ref|YP_003400920.1|	-	1.2e-07	31.9	0.0	1.6e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Sensor	PF13796.6	gi|284162297|ref|YP_003400920.1|	-	0.029	14.4	0.8	0.029	14.4	0.8	1.8	2	1	1	3	3	3	0	Putative	sensor
DUF373	PF04123.13	gi|284162297|ref|YP_003400920.1|	-	0.035	13.6	10.7	0.061	12.8	10.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
ADH_zinc_N	PF00107.26	gi|284162297|ref|YP_003400920.1|	-	0.044	13.8	0.0	2.5	8.1	0.0	2.2	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
Glyco_tranf_2_2	PF10111.9	gi|284162297|ref|YP_003400920.1|	-	0.082	12.4	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
PsaL	PF02605.15	gi|284162297|ref|YP_003400920.1|	-	0.1	12.3	0.3	0.18	11.5	0.3	1.4	1	0	0	1	1	1	0	Photosystem	I	reaction	centre	subunit	XI
Glyco_transf_21	PF13506.6	gi|284162297|ref|YP_003400920.1|	-	0.13	11.8	0.0	1.7	8.1	0.0	2.4	1	1	0	2	2	2	0	Glycosyl	transferase	family	21
Glycos_transf_1	PF00534.20	gi|284162298|ref|YP_003400921.1|	-	2.8e-36	124.7	0.0	3.7e-36	124.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284162298|ref|YP_003400921.1|	-	7.5e-26	91.2	0.0	1.4e-25	90.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284162298|ref|YP_003400921.1|	-	5.3e-18	65.6	0.2	1.1e-17	64.6	0.1	1.6	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|284162298|ref|YP_003400921.1|	-	2.3e-06	28.1	0.0	4.2e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Epimerase_2	PF02350.19	gi|284162298|ref|YP_003400921.1|	-	1.3e-05	24.3	0.0	1.8e-05	23.8	0.0	1.1	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_1_2	PF13524.6	gi|284162298|ref|YP_003400921.1|	-	9.5e-05	22.7	0.0	0.00019	21.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.21	gi|284162298|ref|YP_003400921.1|	-	0.19	10.4	0.0	0.29	9.8	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	family	20
NTP_transferase	PF00483.23	gi|284162299|ref|YP_003400922.1|	-	1.3e-53	182.1	0.0	1.6e-53	181.8	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|284162299|ref|YP_003400922.1|	-	3.5e-08	34.0	0.0	4.7e-08	33.5	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Fucokinase	PF07959.12	gi|284162299|ref|YP_003400922.1|	-	0.00038	19.5	0.5	0.00053	19.0	0.5	1.2	1	0	0	1	1	1	1	L-fucokinase
DUF4954	PF16314.5	gi|284162299|ref|YP_003400922.1|	-	0.0012	17.0	5.1	0.0037	15.5	5.1	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
Hexapep	PF00132.24	gi|284162299|ref|YP_003400922.1|	-	0.0014	18.3	14.2	0.27	11.0	2.4	5.1	5	1	1	6	6	6	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|284162299|ref|YP_003400922.1|	-	0.042	13.6	1.4	0.042	13.6	1.4	4.0	5	1	1	6	6	6	0	Hexapeptide	repeat	of	succinyl-transferase
GDP_Man_Dehyd	PF16363.5	gi|284162300|ref|YP_003400923.1|	-	1.4e-82	277.8	0.0	4e-48	164.5	0.0	2.3	2	0	0	2	2	2	2	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|284162300|ref|YP_003400923.1|	-	1.7e-58	198.0	0.1	2.9e-30	105.5	0.0	2.2	2	0	0	2	2	2	2	NAD	dependent	epimerase/dehydratase	family
Intein_splicing	PF14890.6	gi|284162300|ref|YP_003400923.1|	-	7.7e-19	68.0	0.2	1.6e-18	66.9	0.2	1.5	1	0	0	1	1	1	1	Intein	splicing	domain
3Beta_HSD	PF01073.19	gi|284162300|ref|YP_003400923.1|	-	2.5e-15	56.3	0.1	1e-10	41.1	0.1	2.2	2	0	0	2	2	2	2	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|284162300|ref|YP_003400923.1|	-	1.5e-12	47.2	0.0	1.4e-06	27.6	0.0	2.2	2	0	0	2	2	2	2	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|284162300|ref|YP_003400923.1|	-	7.3e-12	45.0	0.0	2.3e-09	36.8	0.0	2.4	2	0	0	2	2	2	2	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|284162300|ref|YP_003400923.1|	-	2.8e-11	43.1	0.1	3.8e-06	26.2	0.1	3.4	2	1	0	2	2	2	2	Male	sterility	protein
adh_short	PF00106.25	gi|284162300|ref|YP_003400923.1|	-	7.2e-09	35.4	0.1	8.9e-05	22.0	0.0	3.4	4	0	0	4	4	4	2	short	chain	dehydrogenase
LAGLIDADG_3	PF14528.6	gi|284162300|ref|YP_003400923.1|	-	1.7e-07	31.5	4.7	2.6e-06	27.6	0.1	3.2	3	0	0	3	3	2	1	LAGLIDADG-like	domain
NAD_binding_10	PF13460.6	gi|284162300|ref|YP_003400923.1|	-	2.9e-06	27.3	0.0	5.9e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	NAD(P)H-binding
HTH_45	PF14947.6	gi|284162300|ref|YP_003400923.1|	-	0.0019	18.2	0.6	0.0019	18.2	0.6	3.1	3	0	0	3	3	3	1	Winged	helix-turn-helix
NmrA	PF05368.13	gi|284162300|ref|YP_003400923.1|	-	0.0043	16.6	0.0	0.0084	15.7	0.0	1.5	1	0	0	1	1	1	1	NmrA-like	family
RuvB_C	PF05491.13	gi|284162300|ref|YP_003400923.1|	-	0.0083	16.0	0.7	0.025	14.5	0.7	1.8	1	0	0	1	1	1	1	RuvB	C-terminal	winged	helix	domain
HemN_C	PF06969.16	gi|284162300|ref|YP_003400923.1|	-	0.057	13.5	0.0	0.34	11.0	0.0	2.1	2	0	0	2	2	2	0	HemN	C-terminal	domain
Ribosomal_S13	PF00416.22	gi|284162300|ref|YP_003400923.1|	-	0.21	12.0	2.3	8.5	6.8	0.0	3.5	4	0	0	4	4	4	0	Ribosomal	protein	S13/S18
QslA_E	PF18226.1	gi|284162300|ref|YP_003400923.1|	-	0.21	11.5	1.3	0.53	10.2	1.3	1.6	1	0	0	1	1	1	0	LasR-specific	antiactivator	QslA	chain	E
MazE_antitoxin	PF04014.18	gi|284162301|ref|YP_003400924.1|	-	5.6e-05	23.0	4.1	0.00019	21.3	0.6	2.8	2	1	0	2	2	2	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
MraZ	PF02381.18	gi|284162301|ref|YP_003400924.1|	-	0.0002	21.3	0.1	0.00024	21.0	0.1	1.2	1	0	0	1	1	1	1	MraZ	protein,	putative	antitoxin-like
PIN	PF01850.21	gi|284162302|ref|YP_003400925.1|	-	7.1e-19	68.5	0.5	9.5e-19	68.1	0.5	1.2	1	0	0	1	1	1	1	PIN	domain
RmlD_sub_bind	PF04321.17	gi|284162303|ref|YP_003400926.1|	-	7.7e-75	251.6	0.0	9e-75	251.4	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.21	gi|284162303|ref|YP_003400926.1|	-	7e-28	97.7	0.0	2e-27	96.2	0.0	1.6	1	1	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|284162303|ref|YP_003400926.1|	-	1.9e-17	63.6	0.3	3e-16	59.8	0.3	2.5	2	1	0	2	2	2	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|284162303|ref|YP_003400926.1|	-	1.7e-13	50.4	0.7	8.2e-12	44.8	0.0	3.0	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|284162303|ref|YP_003400926.1|	-	7.1e-11	41.6	0.7	3e-10	39.6	0.7	2.2	1	1	1	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.12	gi|284162303|ref|YP_003400926.1|	-	9.1e-11	41.4	0.3	1.5e-09	37.4	0.0	2.4	2	1	0	2	2	2	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|284162303|ref|YP_003400926.1|	-	0.097	12.5	0.0	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	NAD(P)H-binding
KR	PF08659.10	gi|284162303|ref|YP_003400926.1|	-	0.16	11.9	0.3	19	5.1	0.1	2.9	3	0	0	3	3	3	0	KR	domain
dTDP_sugar_isom	PF00908.17	gi|284162304|ref|YP_003400927.1|	-	5.2e-13	49.0	0.0	7.5e-13	48.5	0.0	1.2	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Cupin_2	PF07883.11	gi|284162304|ref|YP_003400927.1|	-	4.4e-05	23.1	0.0	0.0001	21.9	0.0	1.6	1	1	0	1	1	1	1	Cupin	domain
FdtA	PF05523.11	gi|284162304|ref|YP_003400927.1|	-	0.00028	20.6	0.0	0.00037	20.2	0.0	1.1	1	0	0	1	1	1	1	WxcM-like,	C-terminal
Glycos_transf_2	PF00535.26	gi|284162305|ref|YP_003400928.1|	-	5e-26	91.5	0.0	7.6e-26	90.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162305|ref|YP_003400928.1|	-	1.8e-12	47.7	0.0	2.7e-12	47.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|284162305|ref|YP_003400928.1|	-	9e-11	42.1	0.0	1.2e-10	41.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.6	gi|284162305|ref|YP_003400928.1|	-	2.5e-06	27.1	0.0	3.5e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.9	gi|284162305|ref|YP_003400928.1|	-	7.5e-05	22.3	0.4	0.00021	20.8	0.4	1.8	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_5	PF13712.6	gi|284162305|ref|YP_003400928.1|	-	0.033	13.9	0.1	0.57	9.8	0.0	2.2	2	0	0	2	2	2	0	Glycosyltransferase	like	family
Chitin_synth_2	PF03142.15	gi|284162305|ref|YP_003400928.1|	-	0.057	12.0	0.0	0.079	11.6	0.0	1.2	1	0	0	1	1	1	0	Chitin	synthase
NTP_transf_3	PF12804.7	gi|284162305|ref|YP_003400928.1|	-	0.074	13.4	0.0	0.093	13.1	0.0	1.2	1	0	0	1	1	1	0	MobA-like	NTP	transferase	domain
Glycos_transf_2	PF00535.26	gi|284162306|ref|YP_003400929.1|	-	2.7e-32	111.9	0.2	4.3e-32	111.3	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162306|ref|YP_003400929.1|	-	1.3e-22	80.8	0.0	2e-22	80.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|284162306|ref|YP_003400929.1|	-	8.6e-15	54.9	0.6	1.2e-14	54.5	0.6	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|284162306|ref|YP_003400929.1|	-	2.3e-07	30.9	0.3	4.9e-07	29.9	0.2	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_4	PF13704.6	gi|284162306|ref|YP_003400929.1|	-	0.00061	20.3	0.1	0.0032	17.9	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
HisK_sensor	PF18698.1	gi|284162306|ref|YP_003400929.1|	-	0.019	15.3	0.7	0.06	13.7	0.1	1.9	2	0	0	2	2	2	0	Histidine	kinase	sensor	domain
NTP_transferase	PF00483.23	gi|284162306|ref|YP_003400929.1|	-	0.056	13.0	0.1	0.088	12.4	0.1	1.2	1	0	0	1	1	1	0	Nucleotidyl	transferase
ABC2_membrane	PF01061.24	gi|284162307|ref|YP_003400930.1|	-	1.3e-24	86.8	28.5	1.3e-24	86.8	28.5	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC_tran	PF00005.27	gi|284162308|ref|YP_003400931.1|	-	2.3e-24	86.4	0.0	8.2e-24	84.7	0.0	1.9	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162308|ref|YP_003400931.1|	-	2.3e-12	47.3	0.2	6.3e-05	22.9	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|284162308|ref|YP_003400931.1|	-	1.9e-07	31.8	0.8	4.3e-07	30.6	0.3	1.6	1	1	1	2	2	2	1	AAA	domain
SMC_N	PF02463.19	gi|284162308|ref|YP_003400931.1|	-	2.1e-06	27.3	0.4	0.012	15.1	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|284162308|ref|YP_003400931.1|	-	3.8e-06	26.5	0.0	6.7e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|284162308|ref|YP_003400931.1|	-	4.3e-06	26.7	0.3	0.0094	15.7	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|284162308|ref|YP_003400931.1|	-	0.00054	20.0	0.4	0.00097	19.1	0.4	1.5	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
Rad17	PF03215.15	gi|284162308|ref|YP_003400931.1|	-	0.0014	18.6	0.1	0.031	14.2	0.0	2.1	1	1	0	2	2	2	1	Rad17	P-loop	domain
AAA	PF00004.29	gi|284162308|ref|YP_003400931.1|	-	0.0016	18.8	0.9	0.012	16.1	0.9	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.6	gi|284162308|ref|YP_003400931.1|	-	0.0017	18.4	0.5	0.96	9.5	0.1	2.3	2	0	0	2	2	2	2	AAA	domain
NTPase_1	PF03266.15	gi|284162308|ref|YP_003400931.1|	-	0.0025	17.7	2.4	0.37	10.7	0.1	2.4	2	0	0	2	2	2	2	NTPase
ABC_ATPase	PF09818.9	gi|284162308|ref|YP_003400931.1|	-	0.0067	15.3	0.7	0.16	10.7	0.1	2.2	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
RsgA_GTPase	PF03193.16	gi|284162308|ref|YP_003400931.1|	-	0.019	14.8	0.0	0.066	13.1	0.0	1.8	2	0	0	2	2	2	0	RsgA	GTPase
AAA_PrkA	PF08298.11	gi|284162308|ref|YP_003400931.1|	-	0.024	13.6	0.1	0.03	13.3	0.1	1.2	1	0	0	1	1	1	0	PrkA	AAA	domain
AAA_22	PF13401.6	gi|284162308|ref|YP_003400931.1|	-	0.03	14.6	0.2	0.13	12.6	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|284162308|ref|YP_003400931.1|	-	0.043	14.4	0.2	0.26	11.8	0.2	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|284162308|ref|YP_003400931.1|	-	0.047	13.3	0.0	0.076	12.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284162308|ref|YP_003400931.1|	-	0.074	12.8	0.1	0.17	11.6	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
DUF2529	PF10740.9	gi|284162308|ref|YP_003400931.1|	-	0.1	12.2	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2529)
Methyltransf_31	PF13847.6	gi|284162308|ref|YP_003400931.1|	-	0.1	12.4	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
AAA_24	PF13479.6	gi|284162308|ref|YP_003400931.1|	-	0.12	12.1	1.4	1.4	8.6	0.2	2.6	3	0	0	3	3	3	0	AAA	domain
AAA_5	PF07728.14	gi|284162308|ref|YP_003400931.1|	-	0.14	12.1	0.1	0.8	9.7	0.1	2.1	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Glycos_transf_2	PF00535.26	gi|284162309|ref|YP_003400932.1|	-	1.6e-53	181.0	3.2	6.2e-30	104.2	0.1	3.7	4	0	0	4	4	3	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162309|ref|YP_003400932.1|	-	3.6e-31	108.9	0.0	7.8e-18	65.2	0.0	2.9	3	0	0	3	3	3	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|284162309|ref|YP_003400932.1|	-	1.7e-19	70.4	1.6	4.5e-08	32.9	0.0	3.9	2	2	0	2	2	2	2	Glycosyltransferase	like	family	2
Methyltransf_25	PF13649.6	gi|284162309|ref|YP_003400932.1|	-	8.3e-08	32.8	0.0	6.5e-07	30.0	0.0	2.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284162309|ref|YP_003400932.1|	-	3e-07	31.0	0.0	9.4e-07	29.4	0.0	1.9	1	0	0	1	1	1	1	Methyltransferase	domain
Glyco_tranf_2_5	PF13712.6	gi|284162309|ref|YP_003400932.1|	-	7.7e-07	29.0	0.0	3.3e-06	26.9	0.1	2.0	2	0	0	2	2	2	1	Glycosyltransferase	like	family
Glyco_trans_2_3	PF13632.6	gi|284162309|ref|YP_003400932.1|	-	6e-06	26.3	0.1	0.0044	17.0	0.0	2.7	2	1	0	2	2	2	1	Glycosyl	transferase	family	group	2
Methyltransf_23	PF13489.6	gi|284162309|ref|YP_003400932.1|	-	7e-06	26.0	0.0	1.9e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Exonuc_VII_L	PF02601.15	gi|284162309|ref|YP_003400932.1|	-	0.00074	19.2	3.3	0.0014	18.3	3.3	1.5	1	0	0	1	1	1	1	Exonuclease	VII,	large	subunit
Methyltransf_12	PF08242.12	gi|284162309|ref|YP_003400932.1|	-	0.00095	19.9	0.1	0.021	15.6	0.0	3.3	2	2	0	2	2	1	1	Methyltransferase	domain
ALIX_LYPXL_bnd	PF13949.6	gi|284162309|ref|YP_003400932.1|	-	0.0011	18.3	14.0	0.0028	17.0	14.0	1.6	1	0	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
Cast	PF10174.9	gi|284162309|ref|YP_003400932.1|	-	0.0015	16.9	15.6	0.0026	16.1	15.6	1.3	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
Fez1	PF06818.15	gi|284162309|ref|YP_003400932.1|	-	0.0034	17.9	23.3	0.0088	16.5	4.5	2.8	2	1	1	3	3	2	2	Fez1
Methyltransf_31	PF13847.6	gi|284162309|ref|YP_003400932.1|	-	0.0091	15.8	5.3	0.02	14.7	0.0	3.5	2	2	2	4	4	4	1	Methyltransferase	domain
HrpB7	PF09486.10	gi|284162309|ref|YP_003400932.1|	-	0.023	15.1	4.9	2.6	8.4	1.4	2.4	2	0	0	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
Spc7	PF08317.11	gi|284162309|ref|YP_003400932.1|	-	0.027	13.3	21.2	0.053	12.4	21.2	1.4	1	0	0	1	1	1	0	Spc7	kinetochore	protein
FAM76	PF16046.5	gi|284162309|ref|YP_003400932.1|	-	0.05	13.0	13.0	0.11	11.9	13.0	1.5	1	0	0	1	1	1	0	FAM76	protein
Ubie_methyltran	PF01209.18	gi|284162309|ref|YP_003400932.1|	-	0.1	11.9	0.1	1.2	8.4	0.0	2.4	2	0	0	2	2	2	0	ubiE/COQ5	methyltransferase	family
GAS	PF13851.6	gi|284162309|ref|YP_003400932.1|	-	0.13	11.6	27.3	0.013	14.8	21.7	2.1	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
DUF3450	PF11932.8	gi|284162309|ref|YP_003400932.1|	-	0.18	11.1	16.6	0.31	10.3	6.9	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
TPR_MLP1_2	PF07926.12	gi|284162309|ref|YP_003400932.1|	-	0.18	11.9	18.6	0.45	10.6	18.6	1.7	1	0	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
DUF724	PF05266.14	gi|284162309|ref|YP_003400932.1|	-	0.22	11.3	16.7	0.44	10.3	16.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
ADIP	PF11559.8	gi|284162309|ref|YP_003400932.1|	-	0.27	11.3	26.7	0.43	10.7	8.5	3.0	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Lebercilin	PF15619.6	gi|284162309|ref|YP_003400932.1|	-	0.31	10.7	27.2	0.11	12.2	17.2	2.4	1	1	1	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
HIP1_clath_bdg	PF16515.5	gi|284162309|ref|YP_003400932.1|	-	0.35	11.5	17.4	0.8	10.3	6.9	2.6	1	1	1	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
BORCS8	PF10167.9	gi|284162309|ref|YP_003400932.1|	-	0.43	10.5	4.9	0.69	9.9	2.9	2.4	1	1	1	2	2	2	0	BLOC-1-related	complex	sub-unit	8
CALCOCO1	PF07888.11	gi|284162309|ref|YP_003400932.1|	-	0.43	9.4	20.9	0.37	9.6	7.1	2.1	1	1	1	2	2	2	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
CENP-Q	PF13094.6	gi|284162309|ref|YP_003400932.1|	-	0.48	10.6	16.6	1.1	9.4	16.6	1.6	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Tektin	PF03148.14	gi|284162309|ref|YP_003400932.1|	-	0.56	8.9	24.0	0.096	11.4	8.5	2.6	1	1	1	2	2	2	0	Tektin	family
Cnn_1N	PF07989.11	gi|284162309|ref|YP_003400932.1|	-	0.96	9.7	26.4	3	8.1	1.7	3.9	2	1	1	3	3	3	0	Centrosomin	N-terminal	motif	1
DUF1664	PF07889.12	gi|284162309|ref|YP_003400932.1|	-	1.1	9.3	15.2	14	5.7	5.7	3.4	3	1	1	4	4	2	0	Protein	of	unknown	function	(DUF1664)
LMBR1	PF04791.16	gi|284162309|ref|YP_003400932.1|	-	1.5	7.6	3.5	2.7	6.8	3.5	1.4	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
DUF4527	PF15030.6	gi|284162309|ref|YP_003400932.1|	-	1.7	8.0	10.3	2.7	7.4	10.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4527)
DUF4407	PF14362.6	gi|284162309|ref|YP_003400932.1|	-	1.8	7.9	8.8	2.9	7.1	8.8	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
APG6_N	PF17675.1	gi|284162309|ref|YP_003400932.1|	-	1.9	9.0	28.4	12	6.5	12.0	2.6	1	1	1	2	2	2	0	Apg6	coiled-coil	region
Jnk-SapK_ap_N	PF09744.9	gi|284162309|ref|YP_003400932.1|	-	2.2	8.5	18.3	8.4	6.6	18.0	2.2	2	0	0	2	2	1	0	JNK_SAPK-associated	protein-1
Csm1_N	PF18504.1	gi|284162309|ref|YP_003400932.1|	-	3	8.2	24.8	2.6	8.5	6.9	4.4	1	1	3	4	4	4	0	Csm1	N-terminal	domain
Cep57_CLD_2	PF14197.6	gi|284162309|ref|YP_003400932.1|	-	3.4	7.8	22.0	6.8	6.9	2.7	3.0	1	1	2	3	3	3	0	Centrosome	localisation	domain	of	PPC89
TMF_DNA_bd	PF12329.8	gi|284162309|ref|YP_003400932.1|	-	3.8	7.6	32.2	2.1	8.4	13.6	3.3	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
IFT20	PF14931.6	gi|284162309|ref|YP_003400932.1|	-	4.8	7.4	20.5	0.45	10.7	4.8	3.1	2	0	0	2	2	2	0	Intraflagellar	transport	complex	B,	subunit	20
UPF0242	PF06785.11	gi|284162309|ref|YP_003400932.1|	-	5.7	7.0	32.7	1.3	9.0	11.7	2.8	2	1	1	3	3	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
GrpE	PF01025.19	gi|284162309|ref|YP_003400932.1|	-	6.9	6.3	21.9	12	5.5	10.0	3.1	1	1	1	2	2	2	0	GrpE
DUF16	PF01519.16	gi|284162309|ref|YP_003400932.1|	-	7.4	7.1	23.9	0.21	12.1	7.9	3.4	2	1	1	3	3	2	0	Protein	of	unknown	function	DUF16
TMF_TATA_bd	PF12325.8	gi|284162309|ref|YP_003400932.1|	-	8	6.7	21.7	27	5.0	14.4	2.7	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
SlyX	PF04102.12	gi|284162309|ref|YP_003400932.1|	-	9.4	6.9	15.1	0.88	10.2	2.0	2.9	1	1	0	2	2	2	0	SlyX
Peptidase_S46	PF10459.9	gi|284162309|ref|YP_003400932.1|	-	9.9	4.7	8.5	1.1e+02	1.2	9.9	1.9	2	0	0	2	2	2	0	Peptidase	S46
YfhO	PF09586.10	gi|284162310|ref|YP_003400933.1|	-	9.7e-10	37.4	35.6	2.7e-09	35.9	0.1	2.5	2	1	0	2	2	2	2	Bacterial	membrane	protein	YfhO
DUF5090	PF17009.5	gi|284162312|ref|YP_003400935.1|	-	1	9.3	9.2	1.5	8.8	9.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5090)
OppC_N	PF12911.7	gi|284162312|ref|YP_003400935.1|	-	1	9.4	5.9	0.41	10.6	1.4	2.4	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Methyltransf_23	PF13489.6	gi|284162314|ref|YP_003400937.1|	-	2.4e-16	60.0	0.0	2.7e-16	59.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284162314|ref|YP_003400937.1|	-	2.5e-14	53.7	0.0	3.9e-14	53.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|284162314|ref|YP_003400937.1|	-	7.7e-13	49.0	0.0	1.2e-12	48.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284162314|ref|YP_003400937.1|	-	5e-12	45.9	0.0	6.1e-12	45.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284162314|ref|YP_003400937.1|	-	1.9e-10	41.4	0.0	3e-10	40.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.12	gi|284162314|ref|YP_003400937.1|	-	8.6e-07	28.7	0.0	1.1e-06	28.4	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
DREV	PF05219.12	gi|284162314|ref|YP_003400937.1|	-	4.9e-06	25.8	0.0	5.7e-06	25.6	0.0	1.1	1	0	0	1	1	1	1	DREV	methyltransferase
CMAS	PF02353.20	gi|284162314|ref|YP_003400937.1|	-	0.00011	21.6	0.0	0.00015	21.2	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
TehB	PF03848.14	gi|284162314|ref|YP_003400937.1|	-	0.00013	21.5	0.0	0.00017	21.0	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
NodS	PF05401.11	gi|284162314|ref|YP_003400937.1|	-	0.00048	19.8	0.0	0.00066	19.3	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_32	PF13679.6	gi|284162314|ref|YP_003400937.1|	-	0.00086	19.3	0.0	0.0011	18.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|284162314|ref|YP_003400937.1|	-	0.0032	17.0	0.0	0.0044	16.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_PK	PF05891.12	gi|284162314|ref|YP_003400937.1|	-	0.015	14.8	0.0	0.03	13.8	0.0	1.5	2	0	0	2	2	2	0	AdoMet	dependent	proline	di-methyltransferase
PCMT	PF01135.19	gi|284162314|ref|YP_003400937.1|	-	0.14	11.9	0.0	0.21	11.3	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
LPG_synthase_TM	PF03706.13	gi|284162315|ref|YP_003400938.1|	-	5.8e-37	127.8	29.1	7.3e-37	127.5	29.1	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
CstA	PF02554.14	gi|284162315|ref|YP_003400938.1|	-	4.7	6.0	18.4	0.14	11.1	11.8	1.7	2	1	0	2	2	2	0	Carbon	starvation	protein	CstA
Glycos_transf_2	PF00535.26	gi|284162316|ref|YP_003400939.1|	-	2.1e-24	86.2	0.1	3.1e-24	85.7	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162316|ref|YP_003400939.1|	-	8.2e-07	29.1	0.0	1.3e-06	28.5	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|284162316|ref|YP_003400939.1|	-	0.00011	21.8	0.0	0.00021	20.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Phage_holin_3_6	PF07332.11	gi|284162316|ref|YP_003400939.1|	-	0.0047	16.9	3.0	0.0079	16.2	3.0	1.3	1	0	0	1	1	1	1	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DUF2157	PF09925.9	gi|284162316|ref|YP_003400939.1|	-	0.19	11.5	2.5	8	6.2	0.2	2.2	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2157)
TM140	PF14985.6	gi|284162316|ref|YP_003400939.1|	-	0.26	10.8	2.3	0.42	10.2	2.3	1.2	1	0	0	1	1	1	0	TM140	protein	family
Tetraspanin	PF00335.20	gi|284162316|ref|YP_003400939.1|	-	2.1	8.0	5.5	3	7.5	5.5	1.2	1	0	0	1	1	1	0	Tetraspanin	family
NTP_transferase	PF00483.23	gi|284162317|ref|YP_003400940.1|	-	3.2e-33	115.4	0.0	4e-33	115.0	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|284162317|ref|YP_003400940.1|	-	2.5e-09	37.7	0.0	3.7e-09	37.1	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|284162317|ref|YP_003400940.1|	-	0.008	15.9	0.0	0.012	15.3	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Smr	PF01713.21	gi|284162317|ref|YP_003400940.1|	-	0.099	13.0	0.0	0.26	11.7	0.0	1.7	1	0	0	1	1	1	0	Smr	domain
DUF3137	PF11335.8	gi|284162317|ref|YP_003400940.1|	-	0.12	12.3	0.0	0.66	9.9	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3137)
PIN	PF01850.21	gi|284162318|ref|YP_003400941.1|	-	1.4e-12	48.1	0.5	1.7e-12	47.9	0.5	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1955	PF09205.10	gi|284162318|ref|YP_003400941.1|	-	0.0016	18.2	0.6	0.0023	17.7	0.6	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
TMEM135_C_rich	PF15982.5	gi|284162318|ref|YP_003400941.1|	-	0.046	14.3	0.1	0.057	14.0	0.1	1.3	1	0	0	1	1	1	0	N-terminal	cysteine-rich	region	of	Transmembrane	protein	135
SRP54_N	PF02881.19	gi|284162318|ref|YP_003400941.1|	-	0.052	13.8	0.0	0.23	11.7	0.0	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	helical	bundle	domain
MazE_antitoxin	PF04014.18	gi|284162319|ref|YP_003400942.1|	-	1.2e-07	31.5	1.7	2.2e-07	30.6	0.4	2.0	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
UDPG_MGDP_dh_N	PF03721.14	gi|284162320|ref|YP_003400943.1|	-	1.5e-69	233.3	0.5	2.6e-69	232.6	0.5	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|284162320|ref|YP_003400943.1|	-	1.3e-40	137.5	0.0	2.7e-40	136.5	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|284162320|ref|YP_003400943.1|	-	8.7e-27	93.6	0.1	1.3e-25	89.8	0.1	2.7	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
F420_oxidored	PF03807.17	gi|284162320|ref|YP_003400943.1|	-	7.4e-06	26.5	3.9	0.2	12.3	0.2	4.6	2	1	2	4	4	4	2	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|284162320|ref|YP_003400943.1|	-	0.0029	17.3	0.0	0.028	14.1	0.0	2.4	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.27	gi|284162320|ref|YP_003400943.1|	-	0.017	15.6	0.0	0.069	13.7	0.0	2.1	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.15	gi|284162320|ref|YP_003400943.1|	-	0.023	14.9	0.1	5.7	7.1	0.1	3.2	2	1	1	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|284162320|ref|YP_003400943.1|	-	0.023	14.7	0.0	0.13	12.2	0.0	2.3	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
GFO_IDH_MocA	PF01408.22	gi|284162320|ref|YP_003400943.1|	-	0.033	15.0	0.0	0.71	10.7	0.0	2.8	3	0	0	3	3	3	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Pyr_redox_2	PF07992.14	gi|284162320|ref|YP_003400943.1|	-	0.044	13.0	0.0	0.094	11.9	0.0	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|284162320|ref|YP_003400943.1|	-	0.054	13.4	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF234	PF03008.14	gi|284162321|ref|YP_003400944.1|	-	1.1e-31	109.2	1.6	2.6e-31	108.0	1.6	1.6	1	0	0	1	1	1	1	Archaea	bacterial	proteins	of	unknown	function
ATPase_2	PF01637.18	gi|284162321|ref|YP_003400944.1|	-	5e-17	62.6	0.7	5e-17	62.6	0.7	3.2	3	1	0	3	3	3	1	ATPase	domain	predominantly	from	Archaea
UPF0102	PF02021.17	gi|284162321|ref|YP_003400944.1|	-	0.0037	17.5	0.1	0.008	16.4	0.1	1.6	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0102
DUF3091	PF11291.8	gi|284162321|ref|YP_003400944.1|	-	0.11	12.7	2.8	0.73	10.0	0.1	3.3	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3091)
DUF656	PF04920.12	gi|284162321|ref|YP_003400944.1|	-	0.16	11.9	0.0	0.28	11.1	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF656)
Allexi_40kDa	PF05549.11	gi|284162322|ref|YP_003400945.1|	-	0.1	12.1	0.2	0.1	12.1	0.2	1.0	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
CorA	PF01544.18	gi|284162324|ref|YP_003400947.1|	-	9.2e-76	254.9	3.8	1.1e-75	254.7	3.8	1.0	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
CxxCxxCC	PF03692.15	gi|284162325|ref|YP_003400948.1|	-	3.7e-12	46.7	1.5	5.1e-12	46.3	1.5	1.2	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
EamA	PF00892.20	gi|284162326|ref|YP_003400949.1|	-	9.6e-22	77.6	51.4	1.3e-13	51.3	26.6	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|284162326|ref|YP_003400949.1|	-	0.0073	15.7	4.1	0.0073	15.7	4.1	2.2	1	1	0	2	2	2	2	Triose-phosphate	Transporter	family
DUF4516	PF14990.6	gi|284162326|ref|YP_003400949.1|	-	7.5	6.4	7.9	0.98	9.2	0.2	3.4	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4516)
MoaE	PF02391.17	gi|284162327|ref|YP_003400950.1|	-	1.1e-11	45.0	0.0	1.7e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	MoaE	protein
DUF1297	PF06973.12	gi|284162328|ref|YP_003400951.1|	-	4e-75	251.5	0.8	5.2e-75	251.1	0.8	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|284162328|ref|YP_003400951.1|	-	3.1e-47	159.5	0.0	1.6e-46	157.2	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_3	PF02655.14	gi|284162328|ref|YP_003400951.1|	-	6.4e-05	23.1	0.0	0.00019	21.5	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
AIRS_C	PF02769.22	gi|284162329|ref|YP_003400952.1|	-	3.7e-26	92.1	1.2	6.6e-26	91.3	1.2	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|284162329|ref|YP_003400952.1|	-	4e-15	56.2	0.1	1.2e-14	54.7	0.0	1.8	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
Sua5_yciO_yrdC	PF01300.18	gi|284162330|ref|YP_003400953.1|	-	7.5e-38	129.8	0.0	1.2e-37	129.2	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
zf-HYPF	PF07503.12	gi|284162330|ref|YP_003400953.1|	-	2.3e-32	110.5	10.3	2.2e-16	59.3	1.6	2.6	2	0	0	2	2	2	2	HypF	finger
HypF_C	PF17788.1	gi|284162330|ref|YP_003400953.1|	-	1.2e-29	103.0	0.0	2.2e-29	102.1	0.0	1.4	1	0	0	1	1	1	1	HypF	Kae1-like	domain
Acylphosphatase	PF00708.18	gi|284162330|ref|YP_003400953.1|	-	3.8e-23	81.7	0.1	7.4e-23	80.8	0.1	1.5	1	0	0	1	1	1	1	Acylphosphatase
Peptidase_M22	PF00814.25	gi|284162330|ref|YP_003400953.1|	-	0.0023	17.7	0.0	0.015	15.1	0.0	2.0	2	0	0	2	2	2	1	Glycoprotease	family
Zn-ribbon_8	PF09723.10	gi|284162330|ref|YP_003400953.1|	-	0.036	14.2	1.7	2.2	8.5	0.3	2.8	1	1	1	2	2	2	0	Zinc	ribbon	domain
CHDCT2	PF08074.11	gi|284162330|ref|YP_003400953.1|	-	0.061	13.5	0.1	0.11	12.6	0.1	1.3	1	0	0	1	1	1	0	CHDCT2	(NUC038)	domain
zinc_ribbon_4	PF13717.6	gi|284162330|ref|YP_003400953.1|	-	1.3	9.0	4.5	11	6.0	0.1	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
HypA	PF01155.19	gi|284162330|ref|YP_003400953.1|	-	2.4	8.2	4.5	9.7	6.3	1.3	3.0	2	1	1	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|284162330|ref|YP_003400953.1|	-	3.3	7.8	5.1	36	4.5	5.1	2.2	1	1	0	1	1	1	0	Double	zinc	ribbon
PHP	PF02811.19	gi|284162331|ref|YP_003400954.1|	-	1.8e-10	41.3	0.0	7.2e-10	39.4	0.0	1.8	1	1	0	1	1	1	1	PHP	domain
RNase_P_p30	PF01876.16	gi|284162331|ref|YP_003400954.1|	-	6.8e-06	25.7	0.0	1.3e-05	24.8	0.0	1.4	1	1	0	1	1	1	1	RNase	P	subunit	p30
DUF1152	PF06626.12	gi|284162331|ref|YP_003400954.1|	-	0.044	13.0	0.0	0.081	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1152)
Peptidase_S66C	PF17676.1	gi|284162331|ref|YP_003400954.1|	-	0.066	13.8	0.0	0.13	12.8	0.0	1.4	1	0	0	1	1	1	0	LD-carboxypeptidase	C-terminal	domain
MazE_antitoxin	PF04014.18	gi|284162332|ref|YP_003400955.1|	-	7.7e-10	38.5	2.7	1.6e-09	37.5	0.1	2.7	3	0	0	3	3	3	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PhoU	PF01895.19	gi|284162332|ref|YP_003400955.1|	-	6.1e-06	26.6	8.3	9.9e-06	25.9	4.4	2.6	2	1	0	2	2	2	1	PhoU	domain
Med15_fungi	PF05397.12	gi|284162332|ref|YP_003400955.1|	-	0.032	14.5	0.8	0.17	12.2	0.2	2.5	2	1	0	2	2	2	0	Mediator	complex	subunit	15
DUF1297	PF06973.12	gi|284162333|ref|YP_003400956.1|	-	4.8e-62	208.8	0.0	6.8e-62	208.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|284162333|ref|YP_003400956.1|	-	1.5e-45	154.1	0.0	2.3e-45	153.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
UPF0086	PF01868.16	gi|284162333|ref|YP_003400956.1|	-	0.18	11.8	0.2	0.58	10.1	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	UPF0086
DUF655	PF04919.12	gi|284162334|ref|YP_003400957.1|	-	5.2e-74	248.1	2.5	5.9e-74	247.9	2.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.6	gi|284162334|ref|YP_003400957.1|	-	2.3e-05	24.5	0.0	7.2e-05	23.0	0.0	1.7	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|284162334|ref|YP_003400957.1|	-	0.00039	20.6	0.0	0.00095	19.4	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|284162334|ref|YP_003400957.1|	-	0.025	15.2	0.6	0.14	12.8	0.1	2.5	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
GLTSCR1	PF15249.6	gi|284162334|ref|YP_003400957.1|	-	0.067	13.6	0.2	9.4	6.7	0.0	2.3	2	0	0	2	2	2	0	Conserved	region	of	unknown	function	on	GLTSCR	protein
HHH	PF00633.23	gi|284162334|ref|YP_003400957.1|	-	0.14	12.1	0.0	0.46	10.5	0.0	1.9	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.16	gi|284162335|ref|YP_003400958.1|	-	1.1e-08	35.5	3.5	1.9e-08	34.6	3.5	1.4	1	1	0	1	1	1	1	RNA	polymerase	Rpb4
AKAP7_NLS	PF10469.9	gi|284162335|ref|YP_003400958.1|	-	0.087	12.7	0.3	0.22	11.4	0.3	1.6	1	1	0	1	1	1	0	AKAP7	2'5'	RNA	ligase-like	domain
HeLo	PF14479.6	gi|284162335|ref|YP_003400958.1|	-	0.13	12.1	0.5	0.17	11.7	0.4	1.3	1	1	0	1	1	1	0	Prion-inhibition	and	propagation
Ribosomal_L21e	PF01157.18	gi|284162336|ref|YP_003400959.1|	-	6.3e-35	119.1	1.0	7e-35	118.9	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
Ribosomal_L19	PF01245.20	gi|284162336|ref|YP_003400959.1|	-	0.016	15.1	0.1	0.021	14.8	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L19
TOBE_2	PF08402.10	gi|284162336|ref|YP_003400959.1|	-	0.12	12.6	0.1	10	6.4	0.0	2.4	3	0	0	3	3	3	0	TOBE	domain
GPI	PF06560.11	gi|284162337|ref|YP_003400960.1|	-	2.2e-50	170.5	1.2	2.7e-50	170.2	1.2	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
Cupin_2	PF07883.11	gi|284162337|ref|YP_003400960.1|	-	0.00067	19.3	0.2	0.0014	18.3	0.2	1.6	1	1	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.22	gi|284162337|ref|YP_003400960.1|	-	0.09	12.4	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Cupin
VitK2_biosynth	PF02621.14	gi|284162338|ref|YP_003400961.1|	-	2.9e-87	292.6	0.7	3.2e-87	292.4	0.7	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
NMT1	PF09084.11	gi|284162338|ref|YP_003400961.1|	-	0.00098	19.1	0.0	0.0038	17.2	0.0	1.9	1	1	0	1	1	1	1	NMT1/THI5	like
DUF1512	PF07431.12	gi|284162338|ref|YP_003400961.1|	-	0.021	13.9	0.6	0.91	8.5	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1512)
NS3	PF17530.2	gi|284162338|ref|YP_003400961.1|	-	0.068	12.7	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Non-structural	protein	NS3
Ribosomal_S20p	PF01649.18	gi|284162338|ref|YP_003400961.1|	-	0.076	13.7	0.2	0.33	11.6	0.2	2.0	1	1	0	1	1	1	0	Ribosomal	protein	S20
PhoU_div	PF01865.16	gi|284162339|ref|YP_003400962.1|	-	9.2e-62	208.2	7.3	1e-61	208.0	7.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.19	gi|284162339|ref|YP_003400962.1|	-	3.5e-05	24.2	8.0	0.0033	17.9	0.5	2.4	1	1	0	2	2	2	2	PhoU	domain
Leu_zip	PF15294.6	gi|284162339|ref|YP_003400962.1|	-	0.025	14.1	5.6	0.086	12.3	0.9	2.1	2	0	0	2	2	2	0	Leucine	zipper
FlgN	PF05130.12	gi|284162339|ref|YP_003400962.1|	-	0.1	13.1	2.5	1.3	9.5	0.3	2.2	2	0	0	2	2	2	0	FlgN	protein
D5_N	PF08706.11	gi|284162339|ref|YP_003400962.1|	-	0.13	12.5	0.0	0.24	11.7	0.0	1.4	1	0	0	1	1	1	0	D5	N	terminal	like
DUF812	PF05667.11	gi|284162339|ref|YP_003400962.1|	-	0.23	10.3	6.6	0.13	11.1	0.9	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF812)
HalX	PF08663.10	gi|284162339|ref|YP_003400962.1|	-	0.33	11.3	8.5	0.11	12.8	3.3	2.4	2	1	0	2	2	2	0	HalX	domain
ZapB	PF06005.12	gi|284162339|ref|YP_003400962.1|	-	0.42	11.1	6.2	1.3	9.6	0.5	2.3	2	0	0	2	2	2	0	Cell	division	protein	ZapB
LUC7	PF03194.15	gi|284162339|ref|YP_003400962.1|	-	1.2	8.7	5.8	1.4	8.5	1.1	2.0	1	1	1	2	2	2	0	LUC7	N_terminus
PHO4	PF01384.20	gi|284162340|ref|YP_003400963.1|	-	4.6e-101	338.2	30.7	3.3e-100	335.4	30.7	1.9	1	1	0	1	1	1	1	Phosphate	transporter	family
Baculo_LEF-2	PF03041.14	gi|284162341|ref|YP_003400964.1|	-	0.11	12.2	0.1	0.17	11.5	0.0	1.4	2	0	0	2	2	2	0	lef-2
tRNA_anti-codon	PF01336.25	gi|284162342|ref|YP_003400965.1|	-	1.5e-10	40.9	4.7	2e-09	37.3	0.1	3.4	4	0	0	4	4	4	2	OB-fold	nucleic	acid	binding	domain
Carb_kinase	PF01256.17	gi|284162343|ref|YP_003400966.1|	-	1.3e-43	149.3	0.2	1.9e-43	148.7	0.2	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|284162343|ref|YP_003400966.1|	-	1.7e-43	148.5	0.0	3e-43	147.7	0.0	1.4	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.15	gi|284162343|ref|YP_003400966.1|	-	5.5e-07	29.2	0.0	9e-07	28.5	0.0	1.3	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Semialdhyde_dh	PF01118.24	gi|284162343|ref|YP_003400966.1|	-	0.0075	16.7	0.5	5.8	7.4	0.0	2.8	2	1	0	2	2	2	2	Semialdehyde	dehydrogenase,	NAD	binding	domain
IF-2B	PF01008.17	gi|284162344|ref|YP_003400967.1|	-	2.2e-97	325.7	0.8	2.5e-97	325.5	0.8	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF1356	PF07092.12	gi|284162345|ref|YP_003400968.1|	-	0.06	12.6	0.1	0.088	12.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1356)
Aminotran_1_2	PF00155.21	gi|284162346|ref|YP_003400969.1|	-	7.2e-62	209.6	0.0	8.3e-62	209.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|284162346|ref|YP_003400969.1|	-	8.5e-09	35.2	0.0	1.9e-08	34.0	0.0	1.5	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|284162346|ref|YP_003400969.1|	-	2.4e-06	26.4	0.0	3.5e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|284162346|ref|YP_003400969.1|	-	3.3e-05	23.0	0.0	5.4e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Alliinase_C	PF04864.13	gi|284162346|ref|YP_003400969.1|	-	5.6e-05	22.2	0.0	0.00015	20.7	0.0	1.6	1	1	1	2	2	2	1	Allinase
EF1_GNE	PF00736.19	gi|284162346|ref|YP_003400969.1|	-	0.016	15.3	0.8	1.4	9.1	0.1	3.2	4	0	0	4	4	4	0	EF-1	guanine	nucleotide	exchange	domain
Met_gamma_lyase	PF06838.11	gi|284162346|ref|YP_003400969.1|	-	0.034	12.7	0.1	0.046	12.2	0.1	1.1	1	0	0	1	1	1	0	Methionine	gamma-lyase
RNase_Zc3h12a_2	PF14626.6	gi|284162346|ref|YP_003400969.1|	-	0.11	12.7	0.1	0.4	10.9	0.0	1.9	2	0	0	2	2	2	0	Zc3h12a-like	Ribonuclease	NYN	domain
YabP	PF07873.11	gi|284162347|ref|YP_003400970.1|	-	0.016	15.0	0.1	0.11	12.3	0.1	1.9	1	1	1	2	2	2	0	YabP	family
BD_b_sandwich	PF18820.1	gi|284162347|ref|YP_003400970.1|	-	0.045	13.7	0.1	0.048	13.6	0.1	1.0	1	0	0	1	1	1	0	Bdellovibrio	Beta-sandwich
MgtE	PF01769.16	gi|284162348|ref|YP_003400971.1|	-	2.1e-37	128.2	31.9	1.1e-19	71.1	6.6	3.3	2	1	1	3	3	3	2	Divalent	cation	transporter
DUF432	PF04254.13	gi|284162349|ref|YP_003400972.1|	-	3e-46	156.6	0.3	4.6e-46	156.0	0.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF432)
TNF	PF00229.18	gi|284162349|ref|YP_003400972.1|	-	0.062	13.2	0.2	1.3	8.9	0.0	2.1	2	0	0	2	2	2	0	TNF(Tumour	Necrosis	Factor)	family
MS_channel	PF00924.18	gi|284162350|ref|YP_003400973.1|	-	1.6e-60	204.2	2.5	1.6e-60	204.2	2.5	1.3	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
NnrS	PF05940.12	gi|284162350|ref|YP_003400973.1|	-	0.12	11.7	4.2	0.17	11.2	4.2	1.1	1	0	0	1	1	1	0	NnrS	protein
HAD_2	PF13419.6	gi|284162352|ref|YP_003400975.1|	-	9.5e-17	61.6	1.7	2.1e-15	57.3	0.0	2.0	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|284162352|ref|YP_003400975.1|	-	4.2e-11	43.5	0.0	7.6e-08	32.9	0.0	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|284162352|ref|YP_003400975.1|	-	6.4e-08	32.6	0.0	1.1e-07	31.8	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|284162352|ref|YP_003400975.1|	-	4.4e-05	24.0	0.5	0.15	12.4	0.0	2.7	1	1	2	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Acid_PPase	PF12689.7	gi|284162352|ref|YP_003400975.1|	-	0.18	11.6	0.3	0.39	10.5	0.3	1.9	1	1	0	1	1	1	0	Acid	Phosphatase
UbiA	PF01040.18	gi|284162353|ref|YP_003400976.1|	-	1.2e-50	172.2	19.4	1.4e-50	171.9	19.4	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
HTH_11	PF08279.12	gi|284162354|ref|YP_003400977.1|	-	4.4e-06	26.6	0.4	5.5e-06	26.2	0.4	1.1	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.6	gi|284162354|ref|YP_003400977.1|	-	1e-05	25.0	0.4	1.3e-05	24.7	0.4	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_CodY	PF08222.11	gi|284162354|ref|YP_003400977.1|	-	0.00012	21.5	0.9	0.00016	21.1	0.6	1.4	1	1	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|284162354|ref|YP_003400977.1|	-	0.00025	20.8	0.2	0.00033	20.4	0.2	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
GntR	PF00392.21	gi|284162354|ref|YP_003400977.1|	-	0.0014	18.2	0.6	0.0016	18.0	0.6	1.1	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
FaeA	PF04703.12	gi|284162354|ref|YP_003400977.1|	-	0.002	18.5	0.1	0.0022	18.3	0.1	1.1	1	0	0	1	1	1	1	FaeA-like	protein
TrmB	PF01978.19	gi|284162354|ref|YP_003400977.1|	-	0.0025	17.6	0.3	0.0029	17.4	0.3	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|284162354|ref|YP_003400977.1|	-	0.0026	17.7	0.3	0.0067	16.4	0.3	1.6	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.7	gi|284162354|ref|YP_003400977.1|	-	0.014	15.4	0.0	0.017	15.2	0.0	1.1	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|284162354|ref|YP_003400977.1|	-	0.023	15.0	0.1	0.032	14.6	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HARE-HTH	PF05066.13	gi|284162354|ref|YP_003400977.1|	-	0.025	14.9	0.1	0.028	14.8	0.1	1.3	1	1	0	1	1	1	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
DDRGK	PF09756.9	gi|284162354|ref|YP_003400977.1|	-	0.032	13.8	0.2	0.034	13.7	0.2	1.0	1	0	0	1	1	1	0	DDRGK	domain
TBPIP	PF07106.13	gi|284162354|ref|YP_003400977.1|	-	0.04	13.8	0.1	0.052	13.5	0.1	1.2	1	0	0	1	1	1	0	TBPIP/Hop2	winged	helix	domain
IF2_N	PF04760.15	gi|284162354|ref|YP_003400977.1|	-	0.064	13.1	0.1	0.39	10.6	0.0	1.9	1	1	1	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
MarR	PF01047.22	gi|284162354|ref|YP_003400977.1|	-	0.088	12.7	0.0	0.1	12.5	0.0	1.1	1	0	0	1	1	1	0	MarR	family
E3_UFM1_ligase	PF09743.9	gi|284162354|ref|YP_003400977.1|	-	0.11	12.0	0.0	0.12	12.0	0.0	1.0	1	0	0	1	1	1	0	E3	UFM1-protein	ligase	1
DUF1441	PF07278.11	gi|284162354|ref|YP_003400977.1|	-	0.12	12.3	0.1	0.14	12.1	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1441)
PCNA_N	PF00705.18	gi|284162355|ref|YP_003400978.1|	-	8e-18	64.4	1.0	1.6e-15	56.9	0.3	2.2	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|284162355|ref|YP_003400978.1|	-	4.5e-09	36.6	0.2	1.7e-08	34.7	0.1	2.0	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Pneumo_matrix	PF03393.16	gi|284162355|ref|YP_003400978.1|	-	0.069	12.4	0.3	0.097	11.9	0.3	1.2	1	0	0	1	1	1	0	Pneumovirus	matrix	protein
Rad9	PF04139.13	gi|284162355|ref|YP_003400978.1|	-	0.07	12.6	0.0	0.41	10.1	0.0	1.9	1	1	1	2	2	2	0	Rad9
DNA_primase_lrg	PF04104.14	gi|284162356|ref|YP_003400979.1|	-	1e-29	103.8	3.8	9.2e-28	97.4	3.8	2.5	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
zf-H3C2	PF16721.5	gi|284162356|ref|YP_003400979.1|	-	0.12	12.8	0.3	0.38	11.2	0.2	1.9	2	0	0	2	2	2	0	Zinc-finger	like,	probable	DNA-binding
DUF371	PF04027.13	gi|284162357|ref|YP_003400980.1|	-	2e-47	160.5	0.0	2.3e-47	160.3	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
FBPase_3	PF01950.16	gi|284162358|ref|YP_003400981.1|	-	1.3e-187	623.3	0.0	1.5e-187	623.1	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
CbiX	PF01903.17	gi|284162358|ref|YP_003400981.1|	-	0.098	13.0	0.0	0.23	11.8	0.0	1.6	1	0	0	1	1	1	0	CbiX
ATPase	PF06745.13	gi|284162359|ref|YP_003400982.1|	-	5.4e-74	248.4	0.1	6.1e-74	248.2	0.1	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|284162359|ref|YP_003400982.1|	-	5.5e-07	28.6	0.1	7.6e-07	28.1	0.1	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|284162359|ref|YP_003400982.1|	-	0.0017	18.0	0.0	0.003	17.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|284162359|ref|YP_003400982.1|	-	0.034	13.5	0.0	0.049	13.0	0.0	1.2	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.9	gi|284162359|ref|YP_003400982.1|	-	0.047	12.9	0.0	0.064	12.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
RecA	PF00154.21	gi|284162359|ref|YP_003400982.1|	-	0.068	12.6	0.0	0.17	11.3	0.0	1.6	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
AAA_29	PF13555.6	gi|284162359|ref|YP_003400982.1|	-	0.094	12.5	0.0	0.23	11.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
GP68	PF17469.2	gi|284162359|ref|YP_003400982.1|	-	0.11	13.0	0.0	0.19	12.1	0.0	1.3	1	0	0	1	1	1	0	Phage	protein	Gp68
AAA_16	PF13191.6	gi|284162359|ref|YP_003400982.1|	-	0.12	12.7	0.0	0.15	12.4	0.0	1.2	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.12	gi|284162359|ref|YP_003400982.1|	-	0.13	12.2	0.0	0.2	11.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_24	PF13479.6	gi|284162359|ref|YP_003400982.1|	-	0.13	11.9	0.1	0.41	10.4	0.0	1.8	1	1	1	2	2	2	0	AAA	domain
Fer4_8	PF13183.6	gi|284162360|ref|YP_003400983.1|	-	2.9e-06	27.6	5.6	5.6e-06	26.7	5.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162360|ref|YP_003400983.1|	-	4.6e-06	27.1	7.0	7.6e-06	26.4	7.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284162360|ref|YP_003400983.1|	-	8.6e-06	25.8	7.3	1.6e-05	25.0	7.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Nitrate_red_gam	PF02665.14	gi|284162360|ref|YP_003400983.1|	-	0.00012	21.7	0.9	0.00012	21.7	0.9	2.9	2	1	1	3	3	3	2	Nitrate	reductase	gamma	subunit
Fer4_10	PF13237.6	gi|284162360|ref|YP_003400983.1|	-	0.0023	18.0	13.3	0.051	13.7	14.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162360|ref|YP_003400983.1|	-	0.0093	16.5	13.2	0.093	13.3	13.6	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162360|ref|YP_003400983.1|	-	0.01	16.8	6.0	1.5	9.8	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|284162360|ref|YP_003400983.1|	-	0.037	13.8	12.8	0.13	12.1	2.7	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162360|ref|YP_003400983.1|	-	0.11	12.7	11.2	0.17	12.0	2.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162360|ref|YP_003400983.1|	-	0.16	12.2	8.9	0.53	10.5	1.7	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
TssN	PF17555.2	gi|284162360|ref|YP_003400983.1|	-	3.9	6.8	14.7	0.082	12.3	7.1	1.9	2	1	0	2	2	2	0	Type	VI	secretion	system,	TssN
Fer4_6	PF12837.7	gi|284162360|ref|YP_003400983.1|	-	4.7	7.5	14.5	1.3	9.3	3.4	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284162360|ref|YP_003400983.1|	-	7.2	7.2	9.6	2.2	8.9	0.3	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284162360|ref|YP_003400983.1|	-	7.8	6.7	7.3	8.9	6.6	0.7	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
FlpD	PF02662.16	gi|284162361|ref|YP_003400984.1|	-	3e-46	156.4	1.0	1e-42	145.0	0.0	2.6	2	0	0	2	2	2	2	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Pyr_redox_2	PF07992.14	gi|284162361|ref|YP_003400984.1|	-	4.3e-25	88.5	10.1	6.8e-15	55.1	4.4	2.8	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|284162361|ref|YP_003400984.1|	-	8e-11	42.1	0.3	1.1e-07	31.8	0.1	3.2	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|284162361|ref|YP_003400984.1|	-	2.5e-09	36.8	0.9	6.1e-08	32.3	0.2	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|284162361|ref|YP_003400984.1|	-	1.5e-08	34.7	0.0	3.6e-08	33.5	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|284162361|ref|YP_003400984.1|	-	1.5e-08	34.1	0.3	1.5e-08	34.1	0.3	1.7	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|284162361|ref|YP_003400984.1|	-	1.7e-08	34.2	0.4	1.7e-08	34.2	0.4	1.9	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Fer4_16	PF13484.6	gi|284162361|ref|YP_003400984.1|	-	1e-07	32.8	9.5	0.0019	19.1	2.8	3.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|284162361|ref|YP_003400984.1|	-	1.7e-07	30.7	17.7	9.2e-05	22.1	0.4	3.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
HI0933_like	PF03486.14	gi|284162361|ref|YP_003400984.1|	-	2.1e-07	30.0	0.1	8.1e-05	21.5	0.1	2.8	3	0	0	3	3	3	1	HI0933-like	protein
Fer4_9	PF13187.6	gi|284162361|ref|YP_003400984.1|	-	2.5e-07	30.7	10.7	2.5e-07	30.7	10.7	2.2	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|284162361|ref|YP_003400984.1|	-	3.3e-07	29.7	1.7	0.00014	21.0	0.1	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
K_oxygenase	PF13434.6	gi|284162361|ref|YP_003400984.1|	-	4.5e-07	29.3	0.3	0.0048	16.1	0.1	3.1	3	0	0	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
Pyr_redox	PF00070.27	gi|284162361|ref|YP_003400984.1|	-	5.5e-07	30.1	4.2	0.00055	20.4	0.2	3.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_7	PF12838.7	gi|284162361|ref|YP_003400984.1|	-	3.7e-05	24.2	4.4	0.002	18.7	0.4	3.4	4	0	0	4	4	2	2	4Fe-4S	dicluster	domain
Thi4	PF01946.17	gi|284162361|ref|YP_003400984.1|	-	5.5e-05	22.5	0.0	0.00014	21.2	0.0	1.6	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.19	gi|284162361|ref|YP_003400984.1|	-	8.4e-05	22.0	0.8	0.0015	17.9	0.3	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Fer4_10	PF13237.6	gi|284162361|ref|YP_003400984.1|	-	0.0002	21.4	23.3	0.00026	21.0	13.8	3.0	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284162361|ref|YP_003400984.1|	-	0.00021	21.7	11.8	0.0015	18.9	0.8	3.1	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162361|ref|YP_003400984.1|	-	0.00031	20.7	0.4	0.00031	20.7	0.4	3.8	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|284162361|ref|YP_003400984.1|	-	0.00032	21.2	8.8	0.01	16.4	0.1	3.0	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
S4	PF01479.25	gi|284162361|ref|YP_003400984.1|	-	0.00041	20.0	0.0	0.00086	19.0	0.0	1.5	1	0	0	1	1	1	1	S4	domain
Amino_oxidase	PF01593.24	gi|284162361|ref|YP_003400984.1|	-	0.0007	19.0	0.0	0.0094	15.3	0.0	2.2	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
NAD_binding_9	PF13454.6	gi|284162361|ref|YP_003400984.1|	-	0.0015	18.6	0.6	5	7.1	0.0	3.2	2	1	1	3	3	3	1	FAD-NAD(P)-binding
Trp_halogenase	PF04820.14	gi|284162361|ref|YP_003400984.1|	-	0.0067	15.3	1.2	0.11	11.3	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
AlaDh_PNT_C	PF01262.21	gi|284162361|ref|YP_003400984.1|	-	0.018	14.3	0.0	0.035	13.4	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.6	gi|284162361|ref|YP_003400984.1|	-	0.023	15.2	0.0	0.097	13.1	0.0	2.2	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|284162361|ref|YP_003400984.1|	-	0.036	13.1	0.4	0.19	10.7	0.2	2.0	1	1	1	2	2	2	0	Lycopene	cyclase	protein
Fer4_4	PF12800.7	gi|284162361|ref|YP_003400984.1|	-	0.059	13.9	19.4	0.076	13.6	4.8	3.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
3HCDH_N	PF02737.18	gi|284162361|ref|YP_003400984.1|	-	0.13	12.2	0.0	0.26	11.2	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_2	PF12797.7	gi|284162361|ref|YP_003400984.1|	-	1.4	9.2	31.4	0.039	14.1	1.7	4.0	4	0	0	4	4	3	0	4Fe-4S	binding	domain
FAD_oxidored	PF12831.7	gi|284162362|ref|YP_003400985.1|	-	8.6e-12	45.1	0.0	2.4e-11	43.7	0.0	1.8	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Fer4	PF00037.27	gi|284162362|ref|YP_003400985.1|	-	2.3e-11	43.0	19.3	2e-06	27.4	6.3	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Pyr_redox_2	PF07992.14	gi|284162362|ref|YP_003400985.1|	-	2.4e-11	43.4	6.8	4.9e-09	35.8	6.8	3.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_7	PF12838.7	gi|284162362|ref|YP_003400985.1|	-	1.3e-09	38.5	11.7	0.00026	21.5	0.1	3.2	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
NAD_binding_8	PF13450.6	gi|284162362|ref|YP_003400985.1|	-	1.8e-09	37.7	0.0	3.2e-09	36.9	0.0	1.4	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|284162362|ref|YP_003400985.1|	-	2.5e-09	36.7	0.6	4.6e-09	35.9	0.6	1.4	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|284162362|ref|YP_003400985.1|	-	3.7e-08	33.3	3.5	3.8e-07	30.0	1.0	2.5	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Fer4_10	PF13237.6	gi|284162362|ref|YP_003400985.1|	-	1.9e-07	31.1	13.0	0.0004	20.4	0.7	3.0	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|284162362|ref|YP_003400985.1|	-	4.4e-07	29.3	1.7	2.2e-05	23.7	0.0	2.6	2	1	0	2	2	2	1	Glucose	inhibited	division	protein	A
Fer4_2	PF12797.7	gi|284162362|ref|YP_003400985.1|	-	4.7e-07	29.5	15.8	0.0011	18.9	3.6	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162362|ref|YP_003400985.1|	-	7.2e-07	29.0	17.4	7e-05	22.7	5.7	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284162362|ref|YP_003400985.1|	-	1.3e-06	28.4	35.7	6.7e-05	23.0	14.0	2.8	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
HI0933_like	PF03486.14	gi|284162362|ref|YP_003400985.1|	-	1.7e-06	27.0	0.8	9.7e-06	24.5	0.2	2.2	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_3	PF13738.6	gi|284162362|ref|YP_003400985.1|	-	6e-06	25.7	1.5	0.0017	17.7	0.1	3.2	3	1	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|284162362|ref|YP_003400985.1|	-	1.5e-05	25.1	0.4	0.033	14.2	0.0	2.5	2	0	0	2	2	2	2	FAD-NAD(P)-binding
Fer4_17	PF13534.6	gi|284162362|ref|YP_003400985.1|	-	2.2e-05	24.9	12.3	0.005	17.4	2.8	2.7	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
AlaDh_PNT_C	PF01262.21	gi|284162362|ref|YP_003400985.1|	-	5.6e-05	22.5	0.0	0.00099	18.5	0.0	2.2	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.27	gi|284162362|ref|YP_003400985.1|	-	6.5e-05	23.4	5.8	0.00028	21.4	2.5	2.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|284162362|ref|YP_003400985.1|	-	6.8e-05	22.2	0.1	0.00039	19.8	0.1	2.0	2	0	0	2	2	2	1	Thi4	family
Trp_halogenase	PF04820.14	gi|284162362|ref|YP_003400985.1|	-	7.4e-05	21.8	2.1	0.052	12.4	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Fer4_4	PF12800.7	gi|284162362|ref|YP_003400985.1|	-	0.00014	22.1	15.5	0.015	15.7	3.1	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162362|ref|YP_003400985.1|	-	0.00022	21.3	10.4	0.0024	17.9	1.7	2.8	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
K_oxygenase	PF13434.6	gi|284162362|ref|YP_003400985.1|	-	0.00028	20.2	0.5	0.02	14.1	0.0	3.0	3	0	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Fer4_16	PF13484.6	gi|284162362|ref|YP_003400985.1|	-	0.00061	20.7	16.5	0.0042	18.0	0.4	2.8	3	0	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Lycopene_cycl	PF05834.12	gi|284162362|ref|YP_003400985.1|	-	0.0016	17.6	0.6	0.097	11.7	0.2	2.4	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.19	gi|284162362|ref|YP_003400985.1|	-	0.0071	15.6	0.2	0.012	14.9	0.2	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Amino_oxidase	PF01593.24	gi|284162362|ref|YP_003400985.1|	-	0.011	15.1	0.1	0.023	14.0	0.0	1.6	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
Fer4_22	PF17179.4	gi|284162362|ref|YP_003400985.1|	-	0.09	13.6	6.6	0.49	11.3	1.0	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_S9	PF00380.19	gi|284162362|ref|YP_003400985.1|	-	0.18	12.3	0.1	0.55	10.8	0.0	1.8	2	0	0	2	2	1	0	Ribosomal	protein	S9/S16
Fer4_8	PF13183.6	gi|284162362|ref|YP_003400985.1|	-	0.66	10.5	21.2	0.13	12.8	14.7	2.7	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|284162362|ref|YP_003400985.1|	-	1.3	9.3	10.9	0.78	10.0	0.5	2.8	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284162362|ref|YP_003400985.1|	-	5.2	7.7	15.2	0.45	11.1	1.3	2.9	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
FAD_binding_2	PF00890.24	gi|284162363|ref|YP_003400986.1|	-	1.7e-19	70.2	2.5	1.4e-17	63.9	1.4	2.6	2	1	0	2	2	2	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|284162363|ref|YP_003400986.1|	-	1.6e-08	34.6	0.5	4e-08	33.3	0.5	1.7	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|284162363|ref|YP_003400986.1|	-	1.7e-06	27.5	0.2	0.00041	19.7	0.1	2.8	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|284162363|ref|YP_003400986.1|	-	1.8e-06	27.8	3.6	1e-05	25.3	3.6	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|284162363|ref|YP_003400986.1|	-	0.00073	18.8	0.2	0.0014	17.9	0.2	1.4	1	0	0	1	1	1	1	Thi4	family
NAD_binding_9	PF13454.6	gi|284162363|ref|YP_003400986.1|	-	0.00084	19.4	0.3	0.021	14.8	0.0	2.9	3	0	0	3	3	3	1	FAD-NAD(P)-binding
NAD_binding_8	PF13450.6	gi|284162363|ref|YP_003400986.1|	-	0.0026	18.0	1.2	0.0069	16.6	1.2	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|284162363|ref|YP_003400986.1|	-	0.0039	17.7	0.2	0.011	16.2	0.2	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|284162363|ref|YP_003400986.1|	-	0.014	14.5	4.4	0.05	12.7	1.8	2.7	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|284162363|ref|YP_003400986.1|	-	0.02	14.3	0.7	0.02	14.3	0.7	1.9	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|284162363|ref|YP_003400986.1|	-	0.029	13.2	0.6	0.045	12.6	0.6	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
FlgM	PF04316.13	gi|284162363|ref|YP_003400986.1|	-	0.07	13.5	0.2	0.23	11.8	0.2	1.8	1	0	0	1	1	1	0	Anti-sigma-28	factor,	FlgM
HI0933_like	PF03486.14	gi|284162363|ref|YP_003400986.1|	-	0.13	10.9	0.6	0.6	8.8	0.3	2.1	2	0	0	2	2	2	0	HI0933-like	protein
DUF2114	PF09887.9	gi|284162363|ref|YP_003400986.1|	-	0.23	9.9	0.0	0.36	9.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
APS-reductase_C	PF12139.8	gi|284162364|ref|YP_003400987.1|	-	5.1e-39	132.4	0.0	6.9e-39	131.9	0.0	1.2	1	0	0	1	1	1	1	Adenosine-5'-phosphosulfate	reductase	beta	subunit
Fer4_9	PF13187.6	gi|284162364|ref|YP_003400987.1|	-	3.1e-10	40.1	10.7	4.7e-10	39.5	10.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162364|ref|YP_003400987.1|	-	4e-09	35.9	12.2	4.5e-06	26.3	2.3	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162364|ref|YP_003400987.1|	-	2.1e-08	34.6	9.8	4.4e-08	33.6	9.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162364|ref|YP_003400987.1|	-	5.3e-06	26.5	11.5	0.0056	17.1	3.8	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162364|ref|YP_003400987.1|	-	9.6e-06	25.4	11.4	0.004	17.2	2.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162364|ref|YP_003400987.1|	-	2.1e-05	24.4	11.5	0.025	14.7	2.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162364|ref|YP_003400987.1|	-	0.0003	20.8	13.4	0.0074	16.4	3.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162364|ref|YP_003400987.1|	-	0.002	18.9	16.4	0.0091	16.9	3.5	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|284162364|ref|YP_003400987.1|	-	0.0021	18.3	0.5	0.0021	18.3	0.5	1.9	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162364|ref|YP_003400987.1|	-	0.0025	18.7	8.5	0.013	16.5	1.5	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|284162364|ref|YP_003400987.1|	-	0.0026	17.8	10.4	0.0076	16.4	10.4	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284162364|ref|YP_003400987.1|	-	4	8.0	12.8	2.5e+02	2.2	12.9	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DbpA	PF03880.15	gi|284162365|ref|YP_003400988.1|	-	0.05	13.6	0.0	0.13	12.3	0.0	1.6	1	0	0	1	1	1	0	DbpA	RNA	binding	domain
ATP-sulfurylase	PF01747.17	gi|284162366|ref|YP_003400989.1|	-	9.5e-71	237.6	0.0	1.3e-70	237.2	0.0	1.2	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.6	gi|284162366|ref|YP_003400989.1|	-	4.3e-33	114.2	0.0	7.8e-33	113.4	0.0	1.4	2	0	0	2	2	2	1	PUA-like	domain
DUF4105	PF13387.6	gi|284162366|ref|YP_003400989.1|	-	0.032	13.9	0.0	0.059	13.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4105)
DUF309	PF03745.14	gi|284162366|ref|YP_003400989.1|	-	0.043	13.5	0.0	0.15	11.7	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF309)
Hjc	PF01870.18	gi|284162367|ref|YP_003400990.1|	-	1.8e-31	107.9	0.0	2.4e-31	107.6	0.0	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
AHJR-like	PF18743.1	gi|284162367|ref|YP_003400990.1|	-	0.00084	18.9	0.0	0.0012	18.4	0.0	1.5	1	1	0	1	1	1	1	REase_AHJR-like
AA_kinase	PF00696.28	gi|284162368|ref|YP_003400991.1|	-	6.4e-49	166.7	2.9	7.2e-49	166.6	2.9	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
GatB_Yqey	PF02637.18	gi|284162368|ref|YP_003400991.1|	-	0.016	15.1	1.7	0.036	14.0	0.3	2.1	2	0	0	2	2	2	0	GatB	domain
XPG_N	PF00752.17	gi|284162368|ref|YP_003400991.1|	-	0.093	13.2	0.0	0.93	10.0	0.0	2.2	1	1	1	2	2	2	0	XPG	N-terminal	domain
HD	PF01966.22	gi|284162369|ref|YP_003400992.1|	-	1.1e-11	45.0	0.2	1.7e-11	44.4	0.2	1.3	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|284162369|ref|YP_003400992.1|	-	4e-05	23.2	0.1	0.001	18.6	0.0	2.4	3	0	0	3	3	3	1	HDOD	domain
HnRNP_M	PF11532.8	gi|284162369|ref|YP_003400992.1|	-	0.06	13.6	0.2	0.13	12.5	0.2	1.6	1	0	0	1	1	1	0	Heterogeneous	nuclear	ribonucleoprotein	M
Peptidase_M50	PF02163.22	gi|284162370|ref|YP_003400993.1|	-	9.7e-24	84.0	2.7	1.5e-23	83.3	2.7	1.3	1	0	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.6	gi|284162370|ref|YP_003400993.1|	-	1.8e-12	47.4	0.3	4.4e-09	36.5	0.0	2.4	1	1	1	2	2	2	2	PDZ	domain
PDZ	PF00595.24	gi|284162370|ref|YP_003400993.1|	-	5.9e-10	39.4	2.4	2.6e-07	30.9	0.1	2.6	2	1	1	3	3	3	2	PDZ	domain
PDZ_6	PF17820.1	gi|284162370|ref|YP_003400993.1|	-	4.1e-09	36.1	0.0	0.00025	20.8	0.0	2.3	2	0	0	2	2	2	2	PDZ	domain
PDZ_1	PF12812.7	gi|284162370|ref|YP_003400993.1|	-	0.0052	16.8	0.1	0.015	15.3	0.0	1.8	2	0	0	2	2	2	1	PDZ-like	domain
Tricorn_PDZ	PF14685.6	gi|284162370|ref|YP_003400993.1|	-	0.0055	16.7	0.3	0.24	11.4	0.1	2.2	2	0	0	2	2	2	1	Tricorn	protease	PDZ	domain
Mem_trans	PF03547.18	gi|284162370|ref|YP_003400993.1|	-	0.079	11.3	6.0	0.13	10.7	1.9	2.5	2	0	0	2	2	2	0	Membrane	transport	protein
Radical_SAM	PF04055.21	gi|284162371|ref|YP_003400994.1|	-	1.2e-22	81.0	0.2	6.4e-22	78.7	0.1	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284162371|ref|YP_003400994.1|	-	3.6e-10	40.2	0.0	1e-09	38.8	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284162371|ref|YP_003400994.1|	-	4.8e-09	36.4	0.0	1.1e-08	35.2	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|284162371|ref|YP_003400994.1|	-	0.011	16.3	2.1	0.028	14.9	2.1	1.7	1	0	0	1	1	1	0	Iron-sulfur	cluster-binding	domain
Aminotran_3	PF00202.21	gi|284162372|ref|YP_003400995.1|	-	2.8e-115	385.2	0.0	3.5e-115	384.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|284162372|ref|YP_003400995.1|	-	0.024	13.8	0.0	0.039	13.1	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
PHO4	PF01384.20	gi|284162373|ref|YP_003400996.1|	-	1.8e-52	178.5	30.0	7.1e-52	176.5	30.0	1.7	1	1	0	1	1	1	1	Phosphate	transporter	family
YpmT	PF17431.2	gi|284162373|ref|YP_003400996.1|	-	1.8	8.7	6.6	1.8	8.7	0.1	3.3	3	1	0	3	3	3	0	Uncharacterized	YmpT-like
PhoU_div	PF01865.16	gi|284162374|ref|YP_003400997.1|	-	8.4e-30	103.7	7.6	9.7e-30	103.5	7.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.19	gi|284162374|ref|YP_003400997.1|	-	0.0001	22.7	10.1	0.025	15.0	1.2	3.2	1	1	2	3	3	3	2	PhoU	domain
DUF5082	PF16888.5	gi|284162374|ref|YP_003400997.1|	-	0.089	13.1	0.2	4.9	7.4	0.0	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
CBS	PF00571.28	gi|284162375|ref|YP_003400998.1|	-	1.9e-24	85.8	6.0	1.3e-12	47.9	0.8	2.0	2	0	0	2	2	2	2	CBS	domain
DHBP_synthase	PF00926.19	gi|284162376|ref|YP_003400999.1|	-	1.3e-60	204.2	0.0	1.6e-60	204.0	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
CTP-dep_RFKase	PF01982.16	gi|284162377|ref|YP_003401000.1|	-	4.4e-50	168.8	0.0	7.1e-50	168.2	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_24	PF13412.6	gi|284162377|ref|YP_003401000.1|	-	1.6e-07	30.8	0.3	2.9e-07	29.9	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|284162377|ref|YP_003401000.1|	-	3.3e-07	30.2	0.1	7.2e-07	29.1	0.1	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|284162377|ref|YP_003401000.1|	-	2.7e-06	27.2	0.3	5e-06	26.4	0.3	1.4	1	0	0	1	1	1	1	MarR	family
HemN_C	PF06969.16	gi|284162377|ref|YP_003401000.1|	-	4.8e-06	26.5	0.1	1.7e-05	24.8	0.1	1.9	1	1	0	1	1	1	1	HemN	C-terminal	domain
MarR_2	PF12802.7	gi|284162377|ref|YP_003401000.1|	-	4.7e-05	23.2	0.1	7e-05	22.6	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|284162377|ref|YP_003401000.1|	-	0.00085	19.3	0.2	0.0015	18.5	0.2	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|284162377|ref|YP_003401000.1|	-	0.00096	19.1	0.2	0.002	18.1	0.2	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_12	PF08461.10	gi|284162377|ref|YP_003401000.1|	-	0.0013	18.6	0.4	0.0024	17.8	0.4	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Crp	PF00325.20	gi|284162377|ref|YP_003401000.1|	-	0.0055	16.3	0.0	0.012	15.3	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	crp	family
HTH_45	PF14947.6	gi|284162377|ref|YP_003401000.1|	-	0.0056	16.6	0.3	0.0091	16.0	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
Rrf2	PF02082.20	gi|284162377|ref|YP_003401000.1|	-	0.014	15.7	0.4	0.022	15.1	0.4	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DDRGK	PF09756.9	gi|284162377|ref|YP_003401000.1|	-	0.014	15.0	0.5	0.02	14.5	0.5	1.2	1	0	0	1	1	1	0	DDRGK	domain
HTH_34	PF13601.6	gi|284162377|ref|YP_003401000.1|	-	0.014	15.5	0.3	0.049	13.8	0.5	1.7	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.6	gi|284162377|ref|YP_003401000.1|	-	0.031	14.0	0.1	0.083	12.6	0.1	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4364)
Ribosomal_S25	PF03297.15	gi|284162377|ref|YP_003401000.1|	-	0.037	14.2	0.2	0.059	13.6	0.2	1.4	1	0	0	1	1	1	0	S25	ribosomal	protein
Fe_dep_repress	PF01325.19	gi|284162377|ref|YP_003401000.1|	-	0.042	14.0	0.2	0.042	14.0	0.2	1.7	2	0	0	2	2	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.20	gi|284162377|ref|YP_003401000.1|	-	0.056	13.3	0.6	0.1	12.5	0.6	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_IclR	PF09339.10	gi|284162377|ref|YP_003401000.1|	-	0.075	12.8	0.2	0.12	12.2	0.2	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TrmB	PF01978.19	gi|284162377|ref|YP_003401000.1|	-	0.08	12.8	0.1	0.18	11.7	0.1	1.7	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.17	gi|284162377|ref|YP_003401000.1|	-	0.095	12.6	0.1	0.17	11.7	0.1	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_27	PF13463.6	gi|284162377|ref|YP_003401000.1|	-	0.11	13.0	0.1	0.18	12.3	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF2250	PF10007.9	gi|284162377|ref|YP_003401000.1|	-	0.12	12.5	0.3	0.23	11.6	0.3	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
LexA_DNA_bind	PF01726.16	gi|284162377|ref|YP_003401000.1|	-	0.14	12.0	0.2	0.32	10.8	0.2	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HMG-CoA_red	PF00368.18	gi|284162378|ref|YP_003401001.1|	-	1.6e-115	386.1	0.8	1.9e-115	385.8	0.8	1.1	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF1803	PF08820.10	gi|284162379|ref|YP_003401002.1|	-	0.0011	18.9	0.0	0.0026	17.7	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1803)
DUF262	PF03235.14	gi|284162379|ref|YP_003401002.1|	-	0.0012	19.0	0.2	0.0012	19.0	0.2	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF262
HIGH_NTase1_ass	PF16581.5	gi|284162379|ref|YP_003401002.1|	-	0.023	14.7	0.2	0.043	13.8	0.2	1.4	1	0	0	1	1	1	0	Cytidyltransferase-related	C-terminal	region
DDOST_48kD	PF03345.14	gi|284162379|ref|YP_003401002.1|	-	0.079	11.8	0.0	1.6	7.5	0.0	2.0	2	0	0	2	2	2	0	Oligosaccharyltransferase	48	kDa	subunit	beta
Glyoxal_oxid_N	PF07250.11	gi|284162379|ref|YP_003401002.1|	-	0.12	11.5	0.0	0.21	10.8	0.0	1.4	1	0	0	1	1	1	0	Glyoxal	oxidase	N-terminus
TIP49	PF06068.13	gi|284162380|ref|YP_003401003.1|	-	3.5e-149	496.8	0.5	4.5e-149	496.4	0.5	1.1	1	0	0	1	1	1	1	TIP49	P-loop	domain
TIP49_C	PF17856.1	gi|284162380|ref|YP_003401003.1|	-	2.2e-25	88.5	0.7	6e-25	87.2	0.7	1.8	1	0	0	1	1	1	1	TIP49	AAA-lid	domain
AAA	PF00004.29	gi|284162380|ref|YP_003401003.1|	-	4.4e-12	46.6	0.3	4.3e-09	36.9	0.1	2.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|284162380|ref|YP_003401003.1|	-	1.6e-09	37.7	0.8	7.2e-07	29.1	0.1	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_18	PF13238.6	gi|284162380|ref|YP_003401003.1|	-	3.2e-05	24.5	0.1	0.00066	20.2	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284162380|ref|YP_003401003.1|	-	3.7e-05	24.2	0.0	0.00049	20.5	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|284162380|ref|YP_003401003.1|	-	5.2e-05	23.5	0.0	0.22	11.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|284162380|ref|YP_003401003.1|	-	0.00078	19.2	0.4	0.021	14.5	0.1	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DnaB_C	PF03796.15	gi|284162380|ref|YP_003401003.1|	-	0.0012	18.2	0.1	0.0032	16.9	0.1	1.6	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.9	gi|284162380|ref|YP_003401003.1|	-	0.0013	18.0	0.4	0.004	16.5	0.0	2.0	3	0	0	3	3	3	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_17	PF13207.6	gi|284162380|ref|YP_003401003.1|	-	0.0021	18.5	0.2	0.047	14.1	0.0	3.0	2	1	0	3	3	3	1	AAA	domain
ResIII	PF04851.15	gi|284162380|ref|YP_003401003.1|	-	0.0033	17.4	0.2	0.4	10.6	0.1	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
IstB_IS21	PF01695.17	gi|284162380|ref|YP_003401003.1|	-	0.0043	16.8	0.0	0.0095	15.7	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
T2SSE	PF00437.20	gi|284162380|ref|YP_003401003.1|	-	0.0045	16.1	0.4	0.13	11.3	0.1	2.3	1	1	1	2	2	2	1	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.12	gi|284162380|ref|YP_003401003.1|	-	0.0049	16.2	0.2	0.013	14.8	0.1	1.7	2	0	0	2	2	2	1	Zeta	toxin
AAA_28	PF13521.6	gi|284162380|ref|YP_003401003.1|	-	0.0058	16.9	0.1	0.019	15.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
ATPase	PF06745.13	gi|284162380|ref|YP_003401003.1|	-	0.0059	16.0	0.1	0.055	12.8	0.0	2.4	2	0	0	2	2	2	1	KaiC
Mg_chelatase	PF01078.21	gi|284162380|ref|YP_003401003.1|	-	0.006	16.0	1.2	0.037	13.4	0.3	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|284162380|ref|YP_003401003.1|	-	0.0069	16.4	0.1	0.041	13.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_11	PF13086.6	gi|284162380|ref|YP_003401003.1|	-	0.01	15.6	0.0	0.023	14.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|284162380|ref|YP_003401003.1|	-	0.016	14.7	0.0	0.03	13.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_19	PF13245.6	gi|284162380|ref|YP_003401003.1|	-	0.016	15.5	2.5	0.13	12.6	2.5	2.2	1	1	0	1	1	1	0	AAA	domain
TFIID_20kDa	PF03847.13	gi|284162380|ref|YP_003401003.1|	-	0.025	15.1	1.0	0.084	13.4	0.3	2.3	3	0	0	3	3	1	0	Transcription	initiation	factor	TFIID	subunit	A
AAA_25	PF13481.6	gi|284162380|ref|YP_003401003.1|	-	0.028	14.0	0.0	0.069	12.7	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
Mg_chelatase_C	PF13335.6	gi|284162380|ref|YP_003401003.1|	-	0.037	14.7	0.2	3.9	8.2	0.1	2.5	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI	C-terminal
RNA_helicase	PF00910.22	gi|284162380|ref|YP_003401003.1|	-	0.042	14.3	0.0	0.096	13.1	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
DNA_pol3_delta	PF06144.13	gi|284162380|ref|YP_003401003.1|	-	0.049	13.4	0.1	0.11	12.3	0.1	1.5	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
IPT	PF01745.16	gi|284162380|ref|YP_003401003.1|	-	0.055	12.9	0.0	0.56	9.6	0.1	2.1	2	0	0	2	2	2	0	Isopentenyl	transferase
Rad17	PF03215.15	gi|284162380|ref|YP_003401003.1|	-	0.056	13.4	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
PhoH	PF02562.16	gi|284162380|ref|YP_003401003.1|	-	0.071	12.6	0.2	0.22	10.9	0.2	1.8	1	0	0	1	1	1	0	PhoH-like	protein
AAA_33	PF13671.6	gi|284162380|ref|YP_003401003.1|	-	0.081	13.1	0.0	0.35	11.0	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|284162380|ref|YP_003401003.1|	-	0.11	12.2	1.3	1.3	8.7	0.2	2.5	3	0	0	3	3	2	0	AAA	domain
PhosphMutase	PF10143.9	gi|284162381|ref|YP_003401004.1|	-	1.1e-47	162.0	0.0	1.7e-47	161.5	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|284162381|ref|YP_003401004.1|	-	4.2e-45	154.1	0.0	4.7e-45	153.9	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
DUF1743	PF08489.11	gi|284162381|ref|YP_003401004.1|	-	0.009	16.1	0.0	0.019	15.0	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
Phosphodiest	PF01663.22	gi|284162381|ref|YP_003401004.1|	-	0.15	11.6	0.0	0.27	10.8	0.0	1.4	1	0	0	1	1	1	0	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF2070	PF09843.9	gi|284162382|ref|YP_003401005.1|	-	2.2e-70	237.6	9.8	2.6e-70	237.3	9.8	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
LMF1	PF06762.14	gi|284162382|ref|YP_003401005.1|	-	0.22	10.6	2.9	0.35	9.9	2.9	1.3	1	0	0	1	1	1	0	Lipase	maturation	factor
AsnC_trans_reg	PF01037.21	gi|284162383|ref|YP_003401006.1|	-	2e-14	53.3	0.1	2.2e-14	53.1	0.1	1.0	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
NapD	PF03927.13	gi|284162383|ref|YP_003401006.1|	-	9.5e-06	25.6	0.2	1.4e-05	25.0	0.2	1.3	1	1	0	1	1	1	1	NapD	protein
GYD	PF08734.11	gi|284162383|ref|YP_003401006.1|	-	0.00038	20.3	0.1	0.00041	20.2	0.1	1.2	1	0	0	1	1	1	1	GYD	domain
ACT_4	PF13291.6	gi|284162383|ref|YP_003401006.1|	-	0.0032	18.0	0.6	0.094	13.3	0.0	2.2	1	1	1	2	2	2	1	ACT	domain
Spt5-NGN	PF03439.13	gi|284162383|ref|YP_003401006.1|	-	0.0046	16.8	0.1	0.013	15.3	0.1	1.7	1	1	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
ABM	PF03992.16	gi|284162383|ref|YP_003401006.1|	-	0.064	13.4	0.1	0.12	12.5	0.1	1.6	1	1	0	1	1	1	0	Antibiotic	biosynthesis	monooxygenase
Topo-VIb_trans	PF09239.11	gi|284162384|ref|YP_003401007.1|	-	1.2e-63	213.7	0.1	2.1e-63	212.9	0.1	1.4	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.26	gi|284162384|ref|YP_003401007.1|	-	5.2e-13	49.5	0.0	1.1e-12	48.4	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.6	gi|284162384|ref|YP_003401007.1|	-	2.4e-10	40.4	0.0	5.6e-10	39.2	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Top6b_C	PF18000.1	gi|284162384|ref|YP_003401007.1|	-	6.5e-09	36.0	0.2	8.4e-06	25.9	0.3	2.6	1	1	1	2	2	2	2	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
FbpA	PF05833.11	gi|284162384|ref|YP_003401007.1|	-	0.00061	18.7	0.6	0.0014	17.5	0.0	1.7	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HATPase_c_5	PF14501.6	gi|284162384|ref|YP_003401007.1|	-	0.0083	16.0	0.0	0.039	13.9	0.0	2.1	2	0	0	2	2	2	1	GHKL	domain
MAF_flag10	PF01973.18	gi|284162384|ref|YP_003401007.1|	-	0.021	14.5	0.0	0.048	13.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF115
HATPase_c_2	PF13581.6	gi|284162384|ref|YP_003401007.1|	-	0.054	13.5	0.0	0.4	10.6	0.0	2.2	2	0	0	2	2	2	0	Histidine	kinase-like	ATPase	domain
DUF4290	PF14123.6	gi|284162384|ref|YP_003401007.1|	-	0.079	12.5	0.2	0.15	11.6	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4290)
Trehalase_Ca-bi	PF07492.11	gi|284162384|ref|YP_003401007.1|	-	0.099	12.4	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Neutral	trehalase	Ca2+	binding	domain
SapB_2	PF03489.17	gi|284162384|ref|YP_003401007.1|	-	0.13	12.4	0.0	0.31	11.2	0.0	1.6	1	0	0	1	1	1	0	Saposin-like	type	B,	region	2
Thioredoxin_3	PF13192.6	gi|284162385|ref|YP_003401008.1|	-	8.3e-16	57.8	0.2	9.2e-16	57.7	0.2	1.0	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|284162385|ref|YP_003401008.1|	-	1.5e-07	31.5	0.3	3.2e-07	30.5	0.0	1.7	2	0	0	2	2	2	1	Glutaredoxin
DUF836	PF05768.14	gi|284162385|ref|YP_003401008.1|	-	1.9e-06	28.2	0.1	2.3e-06	27.9	0.1	1.2	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_2	PF13098.6	gi|284162385|ref|YP_003401008.1|	-	0.00011	22.6	0.4	0.0046	17.4	0.4	2.2	1	1	0	1	1	1	1	Thioredoxin-like	domain
TraF	PF13728.6	gi|284162385|ref|YP_003401008.1|	-	0.00052	19.9	0.0	0.00063	19.6	0.0	1.1	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Thioredoxin_4	PF13462.6	gi|284162385|ref|YP_003401008.1|	-	0.00077	19.7	0.8	0.035	14.3	0.0	2.0	1	1	0	2	2	2	1	Thioredoxin
Thioredoxin	PF00085.20	gi|284162385|ref|YP_003401008.1|	-	0.0018	18.2	0.0	0.002	18.1	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Radical_SAM	PF04055.21	gi|284162386|ref|YP_003401009.1|	-	2.6e-29	102.8	0.7	3.1e-29	102.5	0.2	1.4	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284162386|ref|YP_003401009.1|	-	3.9e-13	49.9	0.2	1.4e-12	48.1	0.2	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284162386|ref|YP_003401009.1|	-	3e-12	46.7	0.1	7.4e-12	45.5	0.0	1.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Utp21	PF04192.12	gi|284162386|ref|YP_003401009.1|	-	0.016	14.7	0.0	0.023	14.2	0.0	1.2	1	0	0	1	1	1	0	Utp21	specific	WD40	associated	putative	domain
DUF364	PF04016.12	gi|284162387|ref|YP_003401010.1|	-	2.3e-31	108.4	0.0	3e-31	108.0	0.0	1.1	1	0	0	1	1	1	1	Putative	heavy-metal	chelation
DUF4213	PF13938.6	gi|284162387|ref|YP_003401010.1|	-	1.2e-10	41.5	0.0	3e-10	40.2	0.0	1.7	2	0	0	2	2	2	1	Putative	heavy-metal	chelation
tRNA-synt_1	PF00133.22	gi|284162388|ref|YP_003401011.1|	-	5.1e-70	236.4	3.1	1.4e-48	165.6	0.1	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|284162388|ref|YP_003401011.1|	-	1.1e-26	93.5	3.2	3.1e-10	39.4	0.0	4.0	3	1	1	4	4	4	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|284162388|ref|YP_003401011.1|	-	1.3e-22	80.4	1.7	3.4e-22	79.0	1.7	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.6	gi|284162388|ref|YP_003401011.1|	-	7.4e-13	48.4	0.5	1.1e-10	41.3	0.0	2.9	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|284162388|ref|YP_003401011.1|	-	7.9e-09	35.3	0.1	1.7e-05	24.4	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
Bro-N	PF02498.17	gi|284162388|ref|YP_003401011.1|	-	0.00043	20.9	0.9	0.24	12.1	0.0	3.4	3	0	0	3	3	3	1	BRO	family,	N-terminal	domain
tRNA-synt_1d	PF00750.19	gi|284162388|ref|YP_003401011.1|	-	0.0042	16.1	0.1	0.023	13.7	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
DUF445	PF04286.12	gi|284162388|ref|YP_003401011.1|	-	1.9	8.2	7.7	4.4	7.0	1.5	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF445)
ABC_tran	PF00005.27	gi|284162389|ref|YP_003401012.1|	-	4.8e-37	127.5	0.0	7.3e-37	126.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162389|ref|YP_003401012.1|	-	6e-16	59.1	2.9	2.2e-10	40.9	0.1	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA	PF00004.29	gi|284162389|ref|YP_003401012.1|	-	4.9e-06	27.0	0.1	0.0011	19.4	0.0	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4162	PF13732.6	gi|284162389|ref|YP_003401012.1|	-	3.1e-05	24.6	0.3	0.00011	22.9	0.2	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.6	gi|284162389|ref|YP_003401012.1|	-	0.00012	22.6	0.1	0.00024	21.7	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.19	gi|284162389|ref|YP_003401012.1|	-	0.001	18.6	0.1	0.013	15.0	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284162389|ref|YP_003401012.1|	-	0.0016	18.2	0.0	0.12	12.0	0.0	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|284162389|ref|YP_003401012.1|	-	0.0049	16.6	0.1	0.0098	15.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
KdpD	PF02702.17	gi|284162389|ref|YP_003401012.1|	-	0.012	15.1	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
HTH_11	PF08279.12	gi|284162389|ref|YP_003401012.1|	-	0.035	14.0	0.0	0.089	12.7	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
Rad17	PF03215.15	gi|284162389|ref|YP_003401012.1|	-	0.046	13.7	0.0	0.067	13.1	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|284162389|ref|YP_003401012.1|	-	0.055	13.4	0.3	0.22	11.4	0.1	2.0	2	1	0	2	2	2	0	RsgA	GTPase
AAA_24	PF13479.6	gi|284162389|ref|YP_003401012.1|	-	0.11	12.2	0.7	1.3	8.7	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|284162389|ref|YP_003401012.1|	-	0.12	11.7	0.0	0.27	10.6	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Cytochrom_D1	PF02239.16	gi|284162389|ref|YP_003401012.1|	-	0.13	10.7	0.0	0.2	10.2	0.0	1.2	1	0	0	1	1	1	0	Cytochrome	D1	heme	domain
AAA_16	PF13191.6	gi|284162389|ref|YP_003401012.1|	-	0.14	12.5	0.0	0.27	11.6	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC2_membrane	PF01061.24	gi|284162390|ref|YP_003401013.1|	-	2.9e-37	128.1	24.8	2.9e-37	128.1	24.8	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|284162390|ref|YP_003401013.1|	-	1.5e-13	50.6	22.2	1.5e-13	50.6	22.2	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|284162390|ref|YP_003401013.1|	-	0.00072	18.9	13.2	0.00072	18.9	13.2	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
Radical_SAM	PF04055.21	gi|284162391|ref|YP_003401014.1|	-	3.3e-15	56.9	0.0	8.3e-13	49.0	0.0	2.2	1	1	1	2	2	2	2	Radical	SAM	superfamily
Radical_SAM	PF04055.21	gi|284162392|ref|YP_003401015.1|	-	4e-23	82.6	0.6	4e-23	82.6	0.6	1.9	3	0	0	3	3	3	1	Radical	SAM	superfamily
Lyase_1	PF00206.20	gi|284162393|ref|YP_003401016.1|	-	8.6e-62	209.3	0.0	1.6e-61	208.4	0.0	1.4	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|284162393|ref|YP_003401016.1|	-	6.5e-26	90.7	0.4	2.2e-25	89.0	0.4	2.0	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.11	gi|284162393|ref|YP_003401016.1|	-	5.9e-06	26.4	1.9	5.9e-06	26.4	1.9	2.1	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminal
FumaraseC_C	PF10415.9	gi|284162393|ref|YP_003401016.1|	-	0.00013	22.3	0.5	0.00088	19.6	0.1	2.5	2	0	0	2	2	2	1	Fumarase	C	C-terminus
DUF4373	PF14297.6	gi|284162393|ref|YP_003401016.1|	-	0.011	16.5	1.1	2.5	9.0	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4373)
ASL_C2	PF14698.6	gi|284162393|ref|YP_003401016.1|	-	0.02	15.6	0.3	0.2	12.4	0.0	2.6	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
Filo_VP35	PF02097.15	gi|284162393|ref|YP_003401016.1|	-	0.057	12.5	0.2	0.1	11.6	0.2	1.4	1	0	0	1	1	1	0	Filoviridae	VP35
Phage_TAC_11	PF11836.8	gi|284162393|ref|YP_003401016.1|	-	0.073	13.2	0.3	3.8	7.7	0.2	2.5	2	0	0	2	2	2	0	Phage	tail	tube	protein,	GTA-gp10
DUF1694	PF07997.11	gi|284162393|ref|YP_003401016.1|	-	0.11	12.5	2.8	2.2	8.4	0.2	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1694)
GPP34	PF05719.11	gi|284162393|ref|YP_003401016.1|	-	0.19	11.7	6.0	1.6	8.7	0.3	2.3	2	0	0	2	2	2	0	Golgi	phosphoprotein	3	(GPP34)
Rpr2	PF04032.16	gi|284162395|ref|YP_003401018.1|	-	9.4e-10	38.6	1.2	9.4e-10	38.6	1.2	1.7	2	1	0	2	2	2	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF4398	PF14346.6	gi|284162395|ref|YP_003401018.1|	-	0.012	16.3	0.5	0.018	15.7	0.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
PepSY_like	PF11396.8	gi|284162395|ref|YP_003401018.1|	-	0.2	12.2	0.7	0.36	11.4	0.1	1.7	2	0	0	2	2	2	0	Putative	beta-lactamase-inhibitor-like,	PepSY-like
Com_YlbF	PF06133.11	gi|284162396|ref|YP_003401019.1|	-	1.5e-21	77.0	11.7	1.7e-21	76.8	11.7	1.0	1	0	0	1	1	1	1	Control	of	competence	regulator	ComK,	YlbF/YmcA
DUF5311	PF17238.2	gi|284162396|ref|YP_003401019.1|	-	0.0015	18.5	1.3	0.033	14.1	0.4	2.0	1	1	1	2	2	2	2	Family	of	unknown	function	(DUF5311)
DUF16	PF01519.16	gi|284162396|ref|YP_003401019.1|	-	0.082	13.4	3.7	0.82	10.2	0.5	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
CBS	PF00571.28	gi|284162397|ref|YP_003401020.1|	-	2.9e-30	104.5	6.6	7.8e-16	58.3	0.3	2.9	3	0	0	3	3	3	2	CBS	domain
ParBc	PF02195.18	gi|284162397|ref|YP_003401020.1|	-	1.6e-11	44.4	1.9	2.6e-10	40.4	1.9	2.3	1	1	0	1	1	1	1	ParB-like	nuclease	domain
ParBc_2	PF08857.11	gi|284162397|ref|YP_003401020.1|	-	6.4e-06	26.4	0.1	4.7e-05	23.5	0.1	2.1	1	1	0	1	1	1	1	Putative	ParB-like	nuclease
CodY	PF06018.14	gi|284162397|ref|YP_003401020.1|	-	0.024	14.1	0.3	0.045	13.3	0.3	1.5	1	0	0	1	1	1	0	CodY	GAF-like	domain
PRC	PF05239.16	gi|284162397|ref|YP_003401020.1|	-	0.099	12.7	1.5	3.6	7.8	0.1	3.1	3	0	0	3	3	3	0	PRC-barrel	domain
Fib_alpha	PF08702.10	gi|284162397|ref|YP_003401020.1|	-	0.1	12.8	0.1	0.19	11.9	0.1	1.5	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Acetyltransf_10	PF13673.7	gi|284162397|ref|YP_003401020.1|	-	0.15	12.0	0.0	1.6	8.7	0.0	2.4	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
PRA-PH	PF01503.17	gi|284162398|ref|YP_003401021.1|	-	3.9e-20	72.1	0.2	4.5e-20	71.9	0.2	1.0	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG	PF03819.17	gi|284162398|ref|YP_003401021.1|	-	0.00013	22.1	2.2	0.00013	22.1	2.2	1.7	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
MazG-like	PF12643.7	gi|284162398|ref|YP_003401021.1|	-	0.029	14.6	1.3	0.051	13.8	0.8	1.7	2	0	0	2	2	2	0	MazG-like	family
UBA_6	PF18039.1	gi|284162398|ref|YP_003401021.1|	-	0.059	13.3	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	UBA-like	domain
SRP19	PF01922.17	gi|284162399|ref|YP_003401022.1|	-	3.4e-21	76.0	1.4	4.3e-21	75.7	1.4	1.1	1	0	0	1	1	1	1	SRP19	protein
DUF4535	PF15054.6	gi|284162399|ref|YP_003401022.1|	-	0.71	9.7	4.1	25	4.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4535)
UPF0020	PF01170.18	gi|284162400|ref|YP_003401023.1|	-	1.3e-22	80.4	0.0	1.7e-21	76.8	0.0	2.1	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.6	gi|284162400|ref|YP_003401023.1|	-	6.5e-13	49.2	0.0	2.8e-12	47.2	0.0	2.1	3	0	0	3	3	3	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284162400|ref|YP_003401023.1|	-	1.3e-12	48.2	0.1	6.7e-12	45.9	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284162400|ref|YP_003401023.1|	-	2.9e-08	33.7	0.0	6e-08	32.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.18	gi|284162400|ref|YP_003401023.1|	-	1.6e-06	28.0	0.0	0.00027	20.7	0.0	2.4	2	0	0	2	2	2	1	DNA	methylase
THUMP	PF02926.17	gi|284162400|ref|YP_003401023.1|	-	1.8e-06	28.1	0.2	4.5e-06	26.8	0.1	1.8	2	0	0	2	2	2	1	THUMP	domain
MTS	PF05175.14	gi|284162400|ref|YP_003401023.1|	-	0.00011	21.8	0.0	0.00016	21.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|284162400|ref|YP_003401023.1|	-	0.00087	18.7	0.0	0.0018	17.6	0.0	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Cons_hypoth95	PF03602.15	gi|284162400|ref|YP_003401023.1|	-	0.00088	19.0	0.0	0.0014	18.3	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.6	gi|284162400|ref|YP_003401023.1|	-	0.0045	16.8	0.0	0.056	13.3	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284162400|ref|YP_003401023.1|	-	0.048	14.4	0.0	0.11	13.3	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
N6_Mtase	PF02384.16	gi|284162400|ref|YP_003401023.1|	-	0.056	12.7	0.0	0.18	11.0	0.0	2.0	2	1	0	2	2	2	0	N-6	DNA	Methylase
Diphthamide_syn	PF01866.17	gi|284162401|ref|YP_003401024.1|	-	9.1e-73	245.3	0.1	1.1e-72	245.1	0.1	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
UPF0180	PF03698.13	gi|284162401|ref|YP_003401024.1|	-	0.0079	16.3	0.1	1.9	8.8	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	protein	family	(UPF0180)
DUF1847	PF08901.11	gi|284162401|ref|YP_003401024.1|	-	0.13	11.9	0.0	0.27	10.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1847)
HicA_toxin	PF07927.12	gi|284162401|ref|YP_003401024.1|	-	0.15	12.1	0.1	4.1	7.5	0.0	2.4	2	0	0	2	2	2	0	HicA	toxin	of	bacterial	toxin-antitoxin,
Aconitase_C	PF00694.19	gi|284162402|ref|YP_003401025.1|	-	2.1e-20	73.4	0.0	2.7e-20	73.0	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|284162402|ref|YP_003401025.1|	-	6.7e-07	29.1	0.0	8.5e-05	22.3	0.0	2.0	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
AdoMet_dc	PF02675.15	gi|284162403|ref|YP_003401026.1|	-	7.5e-36	122.6	0.0	8.3e-36	122.5	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
QueF	PF14489.6	gi|284162403|ref|YP_003401026.1|	-	0.033	14.3	0.2	0.36	11.0	0.0	2.1	2	0	0	2	2	2	0	QueF-like	protein
AhpC-TSA	PF00578.21	gi|284162403|ref|YP_003401026.1|	-	0.055	13.4	0.0	0.11	12.4	0.0	1.5	1	1	1	2	2	2	0	AhpC/TSA	family
Herpes_UL42	PF02282.16	gi|284162403|ref|YP_003401026.1|	-	0.14	12.0	0.0	0.17	11.7	0.0	1.1	1	0	0	1	1	1	0	DNA	polymerase	processivity	factor	(UL42)
CBS	PF00571.28	gi|284162404|ref|YP_003401027.1|	-	9.6e-34	115.6	8.0	1.2e-20	73.7	1.4	2.3	2	0	0	2	2	2	2	CBS	domain
zf-RRN7	PF11781.8	gi|284162404|ref|YP_003401027.1|	-	0.041	13.6	0.6	0.041	13.6	0.6	1.6	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
PRC	PF05239.16	gi|284162404|ref|YP_003401027.1|	-	0.14	12.3	4.9	0.27	11.4	0.6	3.1	3	1	0	3	3	3	0	PRC-barrel	domain
DUF3659	PF12396.8	gi|284162404|ref|YP_003401027.1|	-	0.41	10.6	5.5	0.71	9.8	0.3	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3659)
CBS	PF00571.28	gi|284162405|ref|YP_003401028.1|	-	4.4e-56	187.2	9.9	5.4e-16	58.8	0.2	4.2	4	0	0	4	4	4	4	CBS	domain
Ribosomal_L9_C	PF03948.14	gi|284162405|ref|YP_003401028.1|	-	0.0013	19.2	0.1	0.085	13.3	0.0	3.2	3	0	0	3	3	3	1	Ribosomal	protein	L9,	C-terminal	domain
Lig_C	PF18330.1	gi|284162406|ref|YP_003401029.1|	-	4.6e-45	152.6	0.9	1.1e-44	151.5	0.9	1.6	1	0	0	1	1	1	1	Ligase	Pab1020	C-terminal	region
RNA_ligase	PF09414.10	gi|284162406|ref|YP_003401029.1|	-	9.2e-17	61.8	0.3	1.5e-16	61.1	0.3	1.3	1	0	0	1	1	1	1	RNA	ligase
DNA_ligase_A_M	PF01068.21	gi|284162406|ref|YP_003401029.1|	-	3.5e-05	23.6	0.4	0.0067	16.1	0.4	2.3	1	1	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DUF5009	PF16401.5	gi|284162406|ref|YP_003401029.1|	-	0.15	11.5	0.0	0.24	10.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5009)
Glu-tRNAGln	PF02686.15	gi|284162408|ref|YP_003401031.1|	-	5.1e-19	68.3	0.2	7.6e-19	67.8	0.2	1.2	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
DUF896	PF05979.12	gi|284162408|ref|YP_003401031.1|	-	0.0011	18.8	0.1	0.0016	18.3	0.1	1.3	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF896)
Amidase	PF01425.21	gi|284162409|ref|YP_003401032.1|	-	1.6e-154	515.2	0.0	1.8e-154	515.0	0.0	1.0	1	0	0	1	1	1	1	Amidase
DUF3216	PF11505.8	gi|284162409|ref|YP_003401032.1|	-	0.036	14.3	0.2	0.12	12.6	0.2	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3216)
tRNA-synt_2d	PF01409.20	gi|284162410|ref|YP_003401033.1|	-	1.8e-56	191.3	0.0	2.7e-52	177.7	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
SepRS_C	PF18006.1	gi|284162410|ref|YP_003401033.1|	-	1.3e-14	54.0	3.3	3.6e-14	52.6	3.3	1.8	1	0	0	1	1	1	1	O-phosphoseryl-tRNA	synthetase	C-terminal	domain
tRNA_synthFbeta	PF17759.1	gi|284162410|ref|YP_003401033.1|	-	4e-08	33.0	0.0	2.1e-05	24.0	0.0	2.4	2	0	0	2	2	2	2	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
Lambda_Bor	PF06291.11	gi|284162410|ref|YP_003401033.1|	-	0.046	13.8	0.0	0.13	12.3	0.0	1.8	1	0	0	1	1	1	0	Bor	protein
tRNA-synt_2b	PF00587.25	gi|284162410|ref|YP_003401033.1|	-	0.062	13.3	0.0	0.18	11.7	0.0	1.8	1	1	0	1	1	1	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DHHA1	PF02272.19	gi|284162411|ref|YP_003401034.1|	-	2.9e-19	69.8	2.2	6.2e-19	68.8	0.8	2.0	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.20	gi|284162411|ref|YP_003401034.1|	-	0.018	15.3	0.1	0.037	14.3	0.1	1.5	1	0	0	1	1	1	0	DHH	family
T2SSE	PF00437.20	gi|284162412|ref|YP_003401035.1|	-	1.5e-48	165.2	0.0	2.4e-48	164.6	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|284162412|ref|YP_003401035.1|	-	0.0025	18.1	0.0	0.016	15.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|284162412|ref|YP_003401035.1|	-	0.0038	16.6	0.1	0.019	14.3	0.0	1.9	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_7	PF12775.7	gi|284162412|ref|YP_003401035.1|	-	0.0066	16.0	0.0	0.012	15.1	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
ABC_tran	PF00005.27	gi|284162412|ref|YP_003401035.1|	-	0.0082	16.7	0.0	0.018	15.6	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
MMR_HSR1	PF01926.23	gi|284162412|ref|YP_003401035.1|	-	0.021	14.9	0.0	0.11	12.6	0.0	2.1	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.27	gi|284162412|ref|YP_003401035.1|	-	0.085	12.4	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
AAA_15	PF13175.6	gi|284162412|ref|YP_003401035.1|	-	0.09	12.5	0.1	0.41	10.3	0.0	2.1	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_29	PF13555.6	gi|284162412|ref|YP_003401035.1|	-	0.091	12.5	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Septin	PF00735.18	gi|284162412|ref|YP_003401035.1|	-	0.1	11.9	0.4	0.18	11.0	0.0	1.6	2	0	0	2	2	2	0	Septin
AAA_27	PF13514.6	gi|284162412|ref|YP_003401035.1|	-	0.17	11.5	0.0	0.36	10.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
T2SSF	PF00482.23	gi|284162413|ref|YP_003401036.1|	-	2.4e-29	101.8	9.5	3.3e-19	69.1	1.3	4.1	4	0	0	4	4	4	2	Type	II	secretion	system	(T2SS),	protein	F
PfkB	PF00294.24	gi|284162414|ref|YP_003401037.1|	-	5.3e-46	157.3	0.0	6.5e-46	157.0	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
NMT1_3	PF16868.5	gi|284162415|ref|YP_003401038.1|	-	3e-100	335.4	4.5	3.4e-100	335.2	4.5	1.0	1	0	0	1	1	1	1	NMT1-like	family
NMT1	PF09084.11	gi|284162415|ref|YP_003401038.1|	-	5.3e-09	36.3	0.3	7.9e-09	35.8	0.3	1.6	1	1	0	1	1	1	1	NMT1/THI5	like
Phosphonate-bd	PF12974.7	gi|284162415|ref|YP_003401038.1|	-	2.9e-08	33.6	2.1	5.1e-08	32.8	1.2	2.0	2	1	0	2	2	2	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.20	gi|284162415|ref|YP_003401038.1|	-	0.0011	18.4	0.1	0.003	17.0	0.1	1.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
DctP	PF03480.13	gi|284162415|ref|YP_003401038.1|	-	0.0023	17.3	0.0	0.0043	16.4	0.0	1.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein,	family	7
DctM	PF06808.12	gi|284162416|ref|YP_003401039.1|	-	4.5e-114	381.5	40.7	8.2e-114	380.6	40.7	1.4	1	0	0	1	1	1	1	Tripartite	ATP-independent	periplasmic	transporter,	DctM	component
DUF3394	PF11874.8	gi|284162416|ref|YP_003401039.1|	-	0.057	13.1	1.0	0.14	11.8	1.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3394)
DUF1850	PF08905.11	gi|284162417|ref|YP_003401040.1|	-	2.4e-18	66.2	0.0	3.6e-18	65.7	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1850)
SK_channel	PF03530.14	gi|284162417|ref|YP_003401040.1|	-	2.2	8.3	4.5	2.6	8.1	4.1	1.5	1	1	0	1	1	1	0	Calcium-activated	SK	potassium	channel
CBS	PF00571.28	gi|284162418|ref|YP_003401041.1|	-	4.2e-45	152.0	8.1	4.5e-14	52.6	0.1	4.2	4	0	0	4	4	4	4	CBS	domain
zf_CopZ	PF18423.1	gi|284162418|ref|YP_003401041.1|	-	0.0014	18.5	0.5	3.4	7.7	0.1	3.4	3	0	0	3	3	3	2	Zinc	binding	domain
dCache_3	PF14827.6	gi|284162418|ref|YP_003401041.1|	-	0.14	11.8	0.0	2	8.0	0.0	2.3	3	0	0	3	3	3	0	Double	sensory	domain	of	two-component	sensor	kinase
BPD_transp_2	PF02653.16	gi|284162419|ref|YP_003401042.1|	-	1.3e-51	175.3	39.0	1.5e-51	175.1	39.0	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Coa1	PF08695.10	gi|284162419|ref|YP_003401042.1|	-	0.0085	15.8	0.7	0.036	13.8	0.0	2.3	2	0	0	2	2	2	1	Cytochrome	oxidase	complex	assembly	protein	1
BPD_transp_2	PF02653.16	gi|284162420|ref|YP_003401043.1|	-	8.4e-45	153.0	36.1	9.7e-45	152.8	36.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Peripla_BP_6	PF13458.6	gi|284162421|ref|YP_003401044.1|	-	9.9e-38	130.6	0.0	1.3e-37	130.3	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.28	gi|284162421|ref|YP_003401044.1|	-	4e-25	88.7	0.0	5.8e-25	88.1	0.0	1.2	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
PGF-CTERM	PF18204.1	gi|284162421|ref|YP_003401044.1|	-	1.7e-09	37.3	3.2	4.1e-09	36.1	3.2	1.7	1	0	0	1	1	1	1	PGF-CTERM	motif
LppC	PF04348.13	gi|284162421|ref|YP_003401044.1|	-	1.7e-05	23.8	0.1	2.6e-05	23.3	0.1	1.2	1	0	0	1	1	1	1	LppC	putative	lipoprotein
Peripla_BP_5	PF13433.6	gi|284162421|ref|YP_003401044.1|	-	0.0016	17.5	0.1	0.004	16.2	0.0	1.7	3	0	0	3	3	3	1	Periplasmic	binding	protein	domain
AhpC-TSA	PF00578.21	gi|284162421|ref|YP_003401044.1|	-	0.019	14.9	0.9	0.14	12.1	0.1	2.6	3	0	0	3	3	3	0	AhpC/TSA	family
ABC_tran	PF00005.27	gi|284162422|ref|YP_003401045.1|	-	1.8e-29	103.0	0.0	2.3e-29	102.7	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
BCA_ABC_TP_C	PF12399.8	gi|284162422|ref|YP_003401045.1|	-	4.5e-10	39.2	0.0	1e-09	38.1	0.0	1.6	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.6	gi|284162422|ref|YP_003401045.1|	-	2.5e-08	34.1	2.1	0.00036	20.5	0.6	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|284162422|ref|YP_003401045.1|	-	9.2e-07	29.6	0.4	9.2e-07	29.6	0.4	1.5	2	0	0	2	2	1	1	AAA	domain
AAA_15	PF13175.6	gi|284162422|ref|YP_003401045.1|	-	1.1e-06	28.7	0.1	1.9e-06	27.9	0.1	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|284162422|ref|YP_003401045.1|	-	2.5e-06	27.1	0.0	4.7e-06	26.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|284162422|ref|YP_003401045.1|	-	1.9e-05	24.2	0.2	0.00016	21.2	0.1	2.0	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|284162422|ref|YP_003401045.1|	-	0.0029	17.5	0.0	0.012	15.5	0.0	1.9	2	0	0	2	2	2	1	RsgA	GTPase
FtsK_SpoIIIE	PF01580.18	gi|284162422|ref|YP_003401045.1|	-	0.0048	16.3	0.1	0.046	13.1	0.0	2.0	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_27	PF13514.6	gi|284162422|ref|YP_003401045.1|	-	0.0054	16.3	0.0	0.0076	15.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|284162422|ref|YP_003401045.1|	-	0.0077	15.3	0.0	0.014	14.5	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ATPase_2	PF01637.18	gi|284162422|ref|YP_003401045.1|	-	0.0097	15.8	0.1	0.014	15.4	0.0	1.4	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
MMR_HSR1	PF01926.23	gi|284162422|ref|YP_003401045.1|	-	0.015	15.3	0.1	0.04	14.0	0.1	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_16	PF13191.6	gi|284162422|ref|YP_003401045.1|	-	0.017	15.5	0.0	0.023	15.1	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|284162422|ref|YP_003401045.1|	-	0.026	14.8	0.0	0.058	13.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Septin	PF00735.18	gi|284162422|ref|YP_003401045.1|	-	0.06	12.6	0.0	0.098	11.9	0.0	1.2	1	0	0	1	1	1	0	Septin
IIGP	PF05049.13	gi|284162422|ref|YP_003401045.1|	-	0.06	12.4	0.0	0.087	11.9	0.0	1.2	1	0	0	1	1	1	0	Interferon-inducible	GTPase	(IIGP)
AAA_10	PF12846.7	gi|284162422|ref|YP_003401045.1|	-	0.084	11.8	0.0	0.18	10.7	0.0	1.5	2	0	0	2	2	2	0	AAA-like	domain
AAA_24	PF13479.6	gi|284162422|ref|YP_003401045.1|	-	0.085	12.6	0.1	0.17	11.6	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|284162422|ref|YP_003401045.1|	-	0.086	13.0	0.0	0.18	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284162422|ref|YP_003401045.1|	-	0.094	12.4	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|284162422|ref|YP_003401045.1|	-	0.1	12.5	0.0	0.27	11.1	0.0	1.6	2	0	0	2	2	2	0	Rad17	P-loop	domain
Dynamin_N	PF00350.23	gi|284162422|ref|YP_003401045.1|	-	0.13	12.3	0.0	0.25	11.4	0.0	1.4	1	0	0	1	1	1	0	Dynamin	family
G-alpha	PF00503.20	gi|284162422|ref|YP_003401045.1|	-	0.14	11.3	0.0	0.15	11.2	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
NACHT	PF05729.12	gi|284162422|ref|YP_003401045.1|	-	0.15	12.0	0.1	0.47	10.4	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
ATP_bind_1	PF03029.17	gi|284162422|ref|YP_003401045.1|	-	0.15	11.8	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
RNA_helicase	PF00910.22	gi|284162422|ref|YP_003401045.1|	-	0.17	12.3	0.0	0.34	11.3	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
ABC_tran	PF00005.27	gi|284162423|ref|YP_003401046.1|	-	1.4e-31	109.9	0.0	1.8e-31	109.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162423|ref|YP_003401046.1|	-	2.4e-15	57.1	0.2	3.5e-08	33.6	0.1	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284162423|ref|YP_003401046.1|	-	2.7e-10	40.1	0.7	3.5e-09	36.4	0.7	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284162423|ref|YP_003401046.1|	-	1.4e-08	34.9	0.4	4.8e-07	29.8	0.1	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284162423|ref|YP_003401046.1|	-	2.7e-08	34.6	0.0	6.8e-08	33.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|284162423|ref|YP_003401046.1|	-	1e-05	25.2	0.0	2.5e-05	24.0	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_ATPase	PF09818.9	gi|284162423|ref|YP_003401046.1|	-	2.6e-05	23.2	0.7	0.0031	16.4	0.1	2.5	2	1	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.6	gi|284162423|ref|YP_003401046.1|	-	4.1e-05	23.9	0.0	9e-05	22.8	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.6	gi|284162423|ref|YP_003401046.1|	-	0.0016	18.6	0.0	0.018	15.3	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
RsgA_GTPase	PF03193.16	gi|284162423|ref|YP_003401046.1|	-	0.0018	18.2	0.1	0.0047	16.8	0.0	1.6	2	0	0	2	2	2	1	RsgA	GTPase
AAA_16	PF13191.6	gi|284162423|ref|YP_003401046.1|	-	0.0022	18.4	0.0	0.0034	17.8	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_27	PF13514.6	gi|284162423|ref|YP_003401046.1|	-	0.0032	17.1	0.0	0.0056	16.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|284162423|ref|YP_003401046.1|	-	0.0033	17.5	0.3	0.036	14.1	0.3	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|284162423|ref|YP_003401046.1|	-	0.0066	16.2	0.3	0.013	15.2	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|284162423|ref|YP_003401046.1|	-	0.0087	15.6	0.0	0.64	9.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|284162423|ref|YP_003401046.1|	-	0.0096	15.9	0.5	0.022	14.7	0.0	1.7	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
NB-ARC	PF00931.22	gi|284162423|ref|YP_003401046.1|	-	0.045	12.9	0.0	0.09	11.9	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|284162423|ref|YP_003401046.1|	-	0.051	12.9	0.0	0.088	12.1	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
ATPase	PF06745.13	gi|284162423|ref|YP_003401046.1|	-	0.052	12.9	0.4	2.4	7.4	0.0	2.1	2	0	0	2	2	2	0	KaiC
AAA	PF00004.29	gi|284162423|ref|YP_003401046.1|	-	0.052	14.0	0.2	0.13	12.6	0.2	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|284162423|ref|YP_003401046.1|	-	0.066	13.4	0.2	0.25	11.5	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
PhoH	PF02562.16	gi|284162423|ref|YP_003401046.1|	-	0.085	12.3	0.0	0.17	11.3	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
RecA	PF00154.21	gi|284162423|ref|YP_003401046.1|	-	0.094	12.2	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
NACHT	PF05729.12	gi|284162423|ref|YP_003401046.1|	-	0.11	12.4	0.6	0.18	11.7	0.2	1.5	2	0	0	2	2	1	0	NACHT	domain
MMR_HSR1	PF01926.23	gi|284162423|ref|YP_003401046.1|	-	0.13	12.4	0.6	0.36	10.9	0.2	1.9	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
cobW	PF02492.19	gi|284162423|ref|YP_003401046.1|	-	0.13	11.8	0.8	0.23	11.0	0.5	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ATP_bind_1	PF03029.17	gi|284162423|ref|YP_003401046.1|	-	0.17	11.6	0.7	0.58	9.9	0.1	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Dynamin_N	PF00350.23	gi|284162423|ref|YP_003401046.1|	-	0.18	11.9	0.1	0.41	10.7	0.1	1.6	2	0	0	2	2	2	0	Dynamin	family
AAA_13	PF13166.6	gi|284162423|ref|YP_003401046.1|	-	0.2	10.3	0.0	0.99	8.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|284162423|ref|YP_003401046.1|	-	0.21	11.3	0.1	0.54	9.9	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Lactamase_B_2	PF12706.7	gi|284162424|ref|YP_003401047.1|	-	6.3e-21	74.8	0.0	5.7e-10	39.0	0.0	2.1	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|284162424|ref|YP_003401047.1|	-	3e-13	50.2	0.9	4.6e-11	43.1	0.2	2.9	1	1	1	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|284162424|ref|YP_003401047.1|	-	1.1e-05	25.0	0.0	2.1e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	tRNase	Z	endonuclease
Lactamase_B_3	PF13483.6	gi|284162424|ref|YP_003401047.1|	-	0.028	14.3	0.0	0.16	11.9	0.0	2.1	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Ribosomal_S10	PF00338.22	gi|284162425|ref|YP_003401048.1|	-	1.7e-24	85.9	0.0	1.9e-24	85.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
PriA_C	PF18074.1	gi|284162425|ref|YP_003401048.1|	-	0.085	13.7	0.1	0.23	12.3	0.0	1.6	2	0	0	2	2	2	0	Primosomal	protein	N	C-terminal	domain
GTP_EFTU	PF00009.27	gi|284162426|ref|YP_003401049.1|	-	3.5e-59	199.6	0.1	4.6e-59	199.2	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|284162426|ref|YP_003401049.1|	-	9.7e-39	132.1	1.3	1.5e-38	131.5	0.2	2.0	3	0	0	3	3	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|284162426|ref|YP_003401049.1|	-	8.2e-18	64.6	1.1	2.3e-17	63.1	1.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|284162426|ref|YP_003401049.1|	-	3.1e-10	40.1	0.1	7.2e-09	35.7	0.1	2.3	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU_D4	PF14578.6	gi|284162426|ref|YP_003401049.1|	-	4.4e-06	26.5	0.8	1.4e-05	24.9	0.8	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
Gtr1_RagA	PF04670.12	gi|284162426|ref|YP_003401049.1|	-	0.0002	20.8	0.2	0.00037	19.9	0.2	1.3	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.23	gi|284162426|ref|YP_003401049.1|	-	0.00024	21.2	0.1	2.4	8.2	0.0	3.8	2	1	2	4	4	4	1	Dynamin	family
FeoB_N	PF02421.18	gi|284162426|ref|YP_003401049.1|	-	0.00073	19.1	1.2	0.056	13.0	0.9	2.8	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
Roc	PF08477.13	gi|284162426|ref|YP_003401049.1|	-	0.0012	19.0	0.1	0.2	11.9	0.1	2.3	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
cobW	PF02492.19	gi|284162426|ref|YP_003401049.1|	-	0.0017	18.0	0.2	0.015	14.9	0.4	2.1	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
Ras	PF00071.22	gi|284162426|ref|YP_003401049.1|	-	0.0049	16.5	0.8	0.019	14.6	0.2	2.0	1	1	1	2	2	2	1	Ras	family
SRPRB	PF09439.10	gi|284162426|ref|YP_003401049.1|	-	0.0049	16.3	0.1	0.11	11.9	0.1	2.2	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
DUF4941	PF16299.5	gi|284162426|ref|YP_003401049.1|	-	0.015	14.7	0.3	0.024	14.0	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4941)
Septin	PF00735.18	gi|284162426|ref|YP_003401049.1|	-	0.017	14.4	0.0	0.037	13.3	0.0	1.5	1	1	0	1	1	1	0	Septin
Arf	PF00025.21	gi|284162426|ref|YP_003401049.1|	-	0.046	13.2	0.2	0.63	9.5	0.1	2.4	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
AMA-1	PF02430.15	gi|284162426|ref|YP_003401049.1|	-	0.097	11.6	0.0	0.13	11.2	0.0	1.2	1	0	0	1	1	1	0	Apical	membrane	antigen	1
Usp	PF00582.26	gi|284162427|ref|YP_003401050.1|	-	6.5e-23	81.8	0.3	8.3e-23	81.5	0.3	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
GYD	PF08734.11	gi|284162427|ref|YP_003401050.1|	-	0.0071	16.3	0.1	0.019	14.9	0.1	1.7	1	1	1	2	2	2	1	GYD	domain
AP_endonuc_2	PF01261.24	gi|284162427|ref|YP_003401050.1|	-	0.13	11.7	0.1	0.18	11.2	0.1	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
CutA1	PF03091.15	gi|284162428|ref|YP_003401051.1|	-	1.8e-34	117.5	0.6	2e-34	117.4	0.6	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
SepF	PF04472.12	gi|284162428|ref|YP_003401051.1|	-	0.11	12.8	0.1	0.39	11.0	0.0	1.9	2	0	0	2	2	2	0	Cell	division	protein	SepF
NTP_transf_2	PF01909.23	gi|284162429|ref|YP_003401052.1|	-	1.2e-09	38.3	0.1	2.7e-09	37.2	0.1	1.7	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|284162429|ref|YP_003401052.1|	-	0.00016	21.7	0.0	0.00037	20.5	0.0	1.7	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
DUF4752	PF15944.5	gi|284162429|ref|YP_003401052.1|	-	0.033	14.2	0.0	0.055	13.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4752)
Imm47	PF15573.6	gi|284162429|ref|YP_003401052.1|	-	0.06	12.8	0.0	0.095	12.2	0.0	1.2	1	0	0	1	1	1	0	Immunity	protein	47
ACP_syn_III_C	PF08541.10	gi|284162429|ref|YP_003401052.1|	-	0.17	12.1	0.0	0.33	11.2	0.0	1.4	1	0	0	1	1	1	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Vut_1	PF02592.15	gi|284162430|ref|YP_003401053.1|	-	5.7e-56	189.0	12.1	5.7e-56	189.0	12.1	1.9	2	0	0	2	2	2	1	Putative	vitamin	uptake	transporter
7tm_1	PF00001.21	gi|284162430|ref|YP_003401053.1|	-	0.022	14.1	5.8	0.02	14.2	5.1	1.3	1	1	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
AFOR_C	PF01314.18	gi|284162431|ref|YP_003401054.1|	-	2.1e-149	497.7	0.1	2.6e-149	497.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|284162431|ref|YP_003401054.1|	-	7.2e-78	261.0	0.3	7.2e-78	261.0	0.3	1.6	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DUF483	PF04467.12	gi|284162432|ref|YP_003401055.1|	-	1.3e-10	41.3	0.6	2.5e-10	40.4	0.6	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF483)
ADK	PF00406.22	gi|284162433|ref|YP_003401056.1|	-	2.8e-63	212.5	0.0	3.4e-63	212.3	0.0	1.1	1	0	0	1	1	1	1	Adenylate	kinase
AAA_17	PF13207.6	gi|284162433|ref|YP_003401056.1|	-	1.7e-34	119.2	0.1	3.4e-34	118.2	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
ADK_lid	PF05191.14	gi|284162433|ref|YP_003401056.1|	-	3.9e-18	65.1	4.3	6.9e-18	64.3	4.3	1.4	1	0	0	1	1	1	1	Adenylate	kinase,	active	site	lid
Hydin_ADK	PF17213.3	gi|284162433|ref|YP_003401056.1|	-	8.5e-08	32.7	0.6	0.0055	17.0	0.2	2.2	1	1	1	2	2	2	2	Hydin	Adenylate	kinase-like	domain
AAA_18	PF13238.6	gi|284162433|ref|YP_003401056.1|	-	4.9e-07	30.4	0.0	9.1e-07	29.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|284162433|ref|YP_003401056.1|	-	3.6e-06	27.2	0.0	7.9e-06	26.1	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|284162433|ref|YP_003401056.1|	-	0.00018	21.2	0.7	1	9.0	0.1	2.9	3	0	0	3	3	3	2	Thymidylate	kinase
zf-IS66	PF13005.7	gi|284162433|ref|YP_003401056.1|	-	0.0039	17.6	2.3	2.5	8.6	0.1	2.7	3	0	0	3	3	3	2	zinc-finger	binding	domain	of	transposase	IS66
AAA_28	PF13521.6	gi|284162433|ref|YP_003401056.1|	-	0.0075	16.5	0.1	0.02	15.2	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
zf-ribbon_3	PF13248.6	gi|284162433|ref|YP_003401056.1|	-	0.015	14.7	3.1	0.5	9.8	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
dNK	PF01712.19	gi|284162433|ref|YP_003401056.1|	-	0.024	14.5	2.0	0.04	13.8	0.0	2.2	3	0	0	3	3	3	0	Deoxynucleoside	kinase
Zn-ribbon_8	PF09723.10	gi|284162433|ref|YP_003401056.1|	-	0.027	14.6	1.6	0.059	13.5	1.6	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|284162433|ref|YP_003401056.1|	-	0.043	13.3	1.2	0.092	12.3	1.2	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
AAA	PF00004.29	gi|284162433|ref|YP_003401056.1|	-	0.045	14.2	0.4	0.093	13.2	0.4	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HypA	PF01155.19	gi|284162433|ref|YP_003401056.1|	-	0.052	13.6	0.1	0.087	12.9	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Cytidylate_kin	PF02224.18	gi|284162433|ref|YP_003401056.1|	-	0.054	13.2	0.0	0.13	12.0	0.0	1.7	1	0	0	1	1	1	0	Cytidylate	kinase
zf-C4_Topoisom	PF01396.19	gi|284162433|ref|YP_003401056.1|	-	0.058	13.2	0.8	0.22	11.4	0.2	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-PHD-like	PF15446.6	gi|284162433|ref|YP_003401056.1|	-	0.066	12.8	0.0	0.092	12.4	0.0	1.2	1	0	0	1	1	1	0	PHD/FYVE-zinc-finger	like	domain
HSP33	PF01430.19	gi|284162433|ref|YP_003401056.1|	-	0.074	12.5	0.1	0.21	11.0	0.0	1.6	1	1	1	2	2	2	0	Hsp33	protein
OrfB_Zn_ribbon	PF07282.11	gi|284162433|ref|YP_003401056.1|	-	0.11	12.4	1.0	0.27	11.2	1.0	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DUF374	PF04028.13	gi|284162433|ref|YP_003401056.1|	-	0.12	11.9	0.0	0.28	10.8	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF374)
CoaE	PF01121.20	gi|284162433|ref|YP_003401056.1|	-	0.13	11.9	0.0	14	5.3	0.0	2.2	2	0	0	2	2	2	0	Dephospho-CoA	kinase
zf-ACC	PF17848.1	gi|284162433|ref|YP_003401056.1|	-	0.19	11.8	2.5	0.47	10.6	0.3	2.4	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
A2L_zn_ribbon	PF08792.10	gi|284162433|ref|YP_003401056.1|	-	0.3	10.9	1.8	8.4	6.2	0.8	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Prok-RING_1	PF14446.6	gi|284162433|ref|YP_003401056.1|	-	1.2	9.2	5.3	12	5.9	0.2	2.4	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
RNA_POL_M_15KD	PF02150.16	gi|284162433|ref|YP_003401056.1|	-	2.2	8.3	4.5	18	5.3	0.6	2.4	1	1	2	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
DUF2116	PF09889.9	gi|284162434|ref|YP_003401057.1|	-	4.3e-24	84.3	0.9	5.1e-24	84.0	0.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zinc_ribbon_2	PF13240.6	gi|284162434|ref|YP_003401057.1|	-	0.0081	15.8	0.6	0.011	15.4	0.6	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|284162434|ref|YP_003401057.1|	-	0.022	14.2	2.6	0.03	13.8	2.6	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-C6H2	PF15801.5	gi|284162434|ref|YP_003401057.1|	-	0.024	14.9	3.0	0.031	14.6	3.0	1.1	1	0	0	1	1	1	0	zf-MYND-like	zinc	finger,	mRNA-binding
DZR	PF12773.7	gi|284162434|ref|YP_003401057.1|	-	0.035	14.1	1.2	0.046	13.8	1.2	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-FLZ	PF04570.14	gi|284162434|ref|YP_003401057.1|	-	0.05	13.1	3.4	0.76	9.3	3.4	2.1	1	1	0	1	1	1	0	zinc-finger	of	the	FCS-type,	C2-C2
DUF2256	PF10013.9	gi|284162434|ref|YP_003401057.1|	-	0.064	13.4	4.0	1.1	9.4	0.1	2.4	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Ecl1	PF12855.7	gi|284162434|ref|YP_003401057.1|	-	0.15	13.2	0.8	0.16	13.1	0.8	1.1	1	0	0	1	1	1	0	ECL1/2/3	zinc	binding	proteins
YHS	PF04945.13	gi|284162434|ref|YP_003401057.1|	-	0.17	12.0	1.5	1.1	9.5	1.5	1.9	1	1	0	1	1	1	0	YHS	domain
Cytidylate_kin2	PF13189.6	gi|284162435|ref|YP_003401058.1|	-	8e-27	94.5	1.5	1e-24	87.6	1.5	2.1	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|284162435|ref|YP_003401058.1|	-	3.1e-18	66.6	0.5	5.3e-18	65.8	0.2	1.6	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|284162435|ref|YP_003401058.1|	-	7.2e-13	49.1	0.1	2.2e-12	47.6	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|284162435|ref|YP_003401058.1|	-	8.1e-13	48.6	0.9	1.6e-05	24.7	0.0	2.1	1	1	1	2	2	2	2	Cytidylate	kinase
AAA_33	PF13671.6	gi|284162435|ref|YP_003401058.1|	-	6.5e-08	32.8	0.2	0.00014	22.0	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_28	PF13521.6	gi|284162435|ref|YP_003401058.1|	-	4e-06	27.2	0.2	9.6e-06	25.9	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.22	gi|284162435|ref|YP_003401058.1|	-	2.5e-05	24.4	0.9	0.00015	21.9	0.9	2.0	1	1	0	1	1	1	1	Shikimate	kinase
ADK	PF00406.22	gi|284162435|ref|YP_003401058.1|	-	0.00032	20.8	0.1	0.00088	19.4	0.0	1.8	1	1	1	2	2	2	1	Adenylate	kinase
dNK	PF01712.19	gi|284162435|ref|YP_003401058.1|	-	0.00094	19.1	3.4	0.048	13.5	0.0	2.2	1	1	0	2	2	2	2	Deoxynucleoside	kinase
AAA	PF00004.29	gi|284162435|ref|YP_003401058.1|	-	0.0028	18.1	0.0	0.0047	17.4	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
CoaE	PF01121.20	gi|284162435|ref|YP_003401058.1|	-	0.0092	15.7	0.1	0.26	11.0	0.0	2.1	1	1	1	2	2	2	1	Dephospho-CoA	kinase
OsmC	PF02566.19	gi|284162435|ref|YP_003401058.1|	-	0.046	14.2	0.3	0.22	12.0	0.1	2.0	2	1	0	2	2	2	0	OsmC-like	protein
Thymidylate_kin	PF02223.17	gi|284162435|ref|YP_003401058.1|	-	0.068	12.8	1.2	4.6	6.9	0.0	2.7	2	1	1	3	3	3	0	Thymidylate	kinase
EMC3_TMCO1	PF01956.16	gi|284162436|ref|YP_003401059.1|	-	2.4e-35	121.8	4.6	2.4e-35	121.8	4.6	1.6	1	1	1	2	2	2	1	Integral	membrane	protein	EMC3/TMCO1-like
60KD_IMP	PF02096.20	gi|284162436|ref|YP_003401059.1|	-	0.001	19.0	1.3	0.001	19.0	1.3	1.8	2	0	0	2	2	2	1	60Kd	inner	membrane	protein
DUF4199	PF13858.6	gi|284162436|ref|YP_003401059.1|	-	0.49	10.8	13.5	0.64	10.4	8.5	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
SecY	PF00344.20	gi|284162437|ref|YP_003401060.1|	-	3.4e-71	240.0	17.5	4.4e-71	239.6	17.5	1.1	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.9	gi|284162437|ref|YP_003401060.1|	-	3.3e-09	36.4	1.5	8.9e-09	35.1	1.5	1.8	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
Phage_holin_5_1	PF06946.11	gi|284162437|ref|YP_003401060.1|	-	0.24	11.8	0.0	0.24	11.8	0.0	2.6	3	0	0	3	3	3	0	Bacteriophage	A118-like	holin,	Hol118
Ribosomal_L27A	PF00828.19	gi|284162438|ref|YP_003401061.1|	-	1.2e-24	87.4	0.1	2.1e-24	86.6	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
DUF2067	PF09840.9	gi|284162438|ref|YP_003401061.1|	-	0.055	13.0	0.2	0.11	12.1	0.2	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
Ribosomal_L19e	PF01280.20	gi|284162438|ref|YP_003401061.1|	-	0.06	13.4	7.9	0.069	13.2	0.1	2.3	2	0	0	2	2	2	0	Ribosomal	protein	L19e
Ribosomal_L30	PF00327.20	gi|284162439|ref|YP_003401062.1|	-	1e-17	63.7	0.2	1.8e-17	63.0	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5	PF00333.20	gi|284162440|ref|YP_003401063.1|	-	8.6e-27	92.9	1.3	1.7e-26	92.0	1.3	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.15	gi|284162440|ref|YP_003401063.1|	-	1.6e-23	81.9	0.2	2.5e-23	81.3	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L5e	PF17144.4	gi|284162441|ref|YP_003401064.1|	-	2.7e-36	125.0	1.9	1.4e-25	90.2	0.7	2.3	1	1	1	2	2	2	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18p	PF00861.22	gi|284162441|ref|YP_003401064.1|	-	3.7e-09	37.0	0.0	5e-09	36.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_L19e	PF01280.20	gi|284162442|ref|YP_003401065.1|	-	3.7e-58	195.7	8.8	4.4e-58	195.4	8.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
HxlR	PF01638.17	gi|284162442|ref|YP_003401065.1|	-	0.00033	20.4	0.2	0.14	12.1	0.1	2.2	2	0	0	2	2	2	2	HxlR-like	helix-turn-helix
SHOCT	PF09851.9	gi|284162442|ref|YP_003401065.1|	-	0.051	13.3	0.2	0.051	13.3	0.2	2.2	3	0	0	3	3	3	0	Short	C-terminal	domain
HTH_24	PF13412.6	gi|284162442|ref|YP_003401065.1|	-	0.14	11.7	2.3	4.1	7.1	0.2	3.0	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
Wbp11	PF09429.10	gi|284162442|ref|YP_003401065.1|	-	1.3	9.4	6.8	3.1	8.3	6.8	1.6	1	1	0	1	1	1	0	WW	domain	binding	protein	11
HTH_12	PF08461.10	gi|284162442|ref|YP_003401065.1|	-	3.1	7.8	9.6	0.44	10.5	3.5	2.4	1	1	1	2	2	2	0	Ribonuclease	R	winged-helix	domain
Ribosomal_L32e	PF01655.18	gi|284162443|ref|YP_003401066.1|	-	3.4e-34	117.5	0.1	4.5e-34	117.1	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.23	gi|284162444|ref|YP_003401067.1|	-	1.7e-27	95.9	2.6	2.5e-13	50.5	0.4	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
TubC_N	PF18563.1	gi|284162444|ref|YP_003401067.1|	-	0.029	14.4	0.1	0.38	10.8	0.0	2.7	3	0	0	3	3	3	0	TubC	N-terminal	docking	domain
Ribosomal_S8	PF00410.19	gi|284162445|ref|YP_003401068.1|	-	8.6e-30	103.3	0.2	1e-29	103.1	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8
YjcQ	PF09639.10	gi|284162445|ref|YP_003401068.1|	-	0.0024	18.0	0.1	0.0037	17.4	0.1	1.3	1	0	0	1	1	1	1	YjcQ	protein
MgsA_C	PF12002.8	gi|284162445|ref|YP_003401068.1|	-	0.17	11.8	0.0	0.2	11.6	0.0	1.2	1	0	0	1	1	1	0	MgsA	AAA+	ATPase	C	terminal
Ribosomal_S14	PF00253.21	gi|284162446|ref|YP_003401069.1|	-	1.5e-16	59.9	5.3	1.6e-16	59.8	5.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
DUF4428	PF14471.6	gi|284162446|ref|YP_003401069.1|	-	0.027	14.4	0.1	0.032	14.1	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
zf-P11	PF03854.14	gi|284162446|ref|YP_003401069.1|	-	0.031	14.0	0.4	0.041	13.5	0.4	1.2	1	0	0	1	1	1	0	P-11	zinc	finger
DUF1451	PF07295.11	gi|284162446|ref|YP_003401069.1|	-	0.12	12.4	0.2	0.15	12.1	0.2	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
zf-3CxxC_2	PF17180.4	gi|284162446|ref|YP_003401069.1|	-	0.54	11.0	4.6	1.4	9.7	0.1	2.1	2	0	0	2	2	2	0	Zinc-binding	domain
zf-C2H2_11	PF16622.5	gi|284162446|ref|YP_003401069.1|	-	0.8	9.5	5.2	1	9.2	1.0	2.1	2	0	0	2	2	2	0	zinc-finger	C2H2-type
zf-CCHC_2	PF13696.6	gi|284162446|ref|YP_003401069.1|	-	8.1	6.4	8.1	8.4	6.3	1.7	2.2	2	0	0	2	2	2	0	Zinc	knuckle
Ribosomal_L5_C	PF00673.21	gi|284162447|ref|YP_003401070.1|	-	1.4e-24	86.0	0.0	2.3e-24	85.4	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|284162447|ref|YP_003401070.1|	-	4e-21	75.1	0.1	7.8e-21	74.2	0.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L5
RELT	PF12606.8	gi|284162447|ref|YP_003401070.1|	-	0.00034	19.5	0.5	0.00068	18.6	0.5	1.5	1	0	0	1	1	1	1	Tumour	necrosis	factor	receptor	superfamily	member	19
Ribosomal_S4e	PF00900.20	gi|284162448|ref|YP_003401071.1|	-	8.3e-23	80.1	1.5	1.6e-22	79.2	0.7	1.8	2	0	0	2	2	2	1	Ribosomal	family	S4e
RS4NT	PF08071.12	gi|284162448|ref|YP_003401071.1|	-	2.7e-12	46.6	3.3	5.1e-12	45.7	3.3	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.25	gi|284162448|ref|YP_003401071.1|	-	3.4e-10	39.5	0.2	1.3e-09	37.6	0.1	2.0	2	0	0	2	2	2	1	S4	domain
KOW	PF00467.29	gi|284162448|ref|YP_003401071.1|	-	3.6e-05	23.5	0.1	9.3e-05	22.2	0.1	1.8	1	0	0	1	1	1	1	KOW	motif
tRNA_SAD	PF07973.14	gi|284162448|ref|YP_003401071.1|	-	0.031	14.4	0.0	0.079	13.1	0.0	1.6	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Ribosomal_S28e	PF01200.18	gi|284162448|ref|YP_003401071.1|	-	0.063	13.3	0.1	0.54	10.3	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S28e
Ribosomal_L26	PF16906.5	gi|284162449|ref|YP_003401072.1|	-	1e-27	96.4	1.0	1.3e-27	96.1	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|284162449|ref|YP_003401072.1|	-	3.7e-08	33.0	4.5	8e-08	32.0	4.5	1.6	1	0	0	1	1	1	1	KOW	motif
PSI_PsaE	PF02427.17	gi|284162449|ref|YP_003401072.1|	-	0.054	13.2	0.4	0.095	12.4	0.4	1.4	1	0	0	1	1	1	0	Photosystem	I	reaction	centre	subunit	IV	/	PsaE
Methyltrans_RNA	PF04452.14	gi|284162449|ref|YP_003401072.1|	-	0.096	12.0	0.1	0.13	11.6	0.1	1.2	1	0	0	1	1	1	0	RNA	methyltransferase
ribosomal_L24	PF17136.4	gi|284162449|ref|YP_003401072.1|	-	0.56	10.6	0.2	0.56	10.6	0.2	2.9	1	1	1	2	2	2	0	Ribosomal	proteins	50S	L24/mitochondrial	39S	L24
IF2_assoc	PF08364.11	gi|284162449|ref|YP_003401072.1|	-	4	7.8	6.9	0.42	10.9	0.4	2.5	2	1	0	2	2	2	0	Bacterial	translation	initiation	factor	IF-2	associated	region
Ribosomal_L14	PF00238.19	gi|284162450|ref|YP_003401073.1|	-	2.9e-39	133.9	0.3	3.2e-39	133.8	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_S17	PF00366.20	gi|284162451|ref|YP_003401074.1|	-	3.6e-24	84.7	1.0	4.6e-24	84.3	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_S17_N	PF16205.5	gi|284162451|ref|YP_003401074.1|	-	8.3e-05	22.9	0.0	0.00017	21.9	0.0	1.6	1	0	0	1	1	1	1	Ribosomal_S17	N-terminal
UPF0086	PF01868.16	gi|284162452|ref|YP_003401075.1|	-	3.5e-24	84.5	0.5	3.9e-24	84.4	0.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_L29	PF00831.23	gi|284162453|ref|YP_003401076.1|	-	2.4e-17	62.6	8.2	2.9e-17	62.4	8.2	1.0	1	0	0	1	1	1	1	Ribosomal	L29	protein
YdiH	PF15930.5	gi|284162453|ref|YP_003401076.1|	-	0.31	11.2	3.0	0.43	10.8	1.5	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function
Ribosomal_S3_C	PF00189.20	gi|284162454|ref|YP_003401077.1|	-	1.2e-23	83.5	0.1	2.4e-23	82.4	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|284162454|ref|YP_003401077.1|	-	1.3e-11	44.1	0.4	3.7e-11	42.7	0.1	2.0	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.29	gi|284162454|ref|YP_003401077.1|	-	0.023	14.5	3.3	0.18	11.7	0.2	2.8	3	0	0	3	3	3	0	KH	domain
Ribosomal_L22	PF00237.19	gi|284162455|ref|YP_003401078.1|	-	1.9e-28	98.7	0.2	2.3e-28	98.4	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.21	gi|284162456|ref|YP_003401079.1|	-	1.9e-28	98.2	0.7	2.9e-28	97.5	0.7	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S19
Citrate_synt	PF00285.21	gi|284162456|ref|YP_003401079.1|	-	0.0057	15.8	0.0	0.006	15.7	0.0	1.1	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
Ribosomal_L2_C	PF03947.18	gi|284162457|ref|YP_003401080.1|	-	1.4e-49	167.5	0.7	4.8e-49	165.8	0.9	1.7	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|284162457|ref|YP_003401080.1|	-	2.8e-16	59.2	0.0	1.2e-15	57.3	0.0	2.1	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.20	gi|284162458|ref|YP_003401081.1|	-	1.8e-14	53.9	1.5	1.1e-13	51.3	1.5	1.8	1	1	0	1	1	1	1	Ribosomal	protein	L23
Ribosomal_S7e	PF01251.18	gi|284162458|ref|YP_003401081.1|	-	0.035	13.9	0.2	0.037	13.8	0.2	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S7e
Ribosomal_L4	PF00573.22	gi|284162459|ref|YP_003401082.1|	-	1.2e-51	175.1	0.7	1.4e-51	174.9	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.22	gi|284162460|ref|YP_003401083.1|	-	3.5e-98	329.0	0.6	5e-97	325.2	0.6	1.9	1	1	0	1	1	1	1	Ribosomal	protein	L3
STE	PF02200.16	gi|284162460|ref|YP_003401083.1|	-	0.0072	16.7	0.0	0.017	15.5	0.0	1.5	1	0	0	1	1	1	1	STE	like	transcription	factor
Methyltrn_RNA_3	PF02598.17	gi|284162461|ref|YP_003401084.1|	-	4.8e-55	187.1	0.0	5.8e-55	186.8	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
SpoU_methylase	PF00588.19	gi|284162461|ref|YP_003401084.1|	-	0.0043	17.2	0.0	2.3	8.4	0.0	2.3	2	0	0	2	2	2	2	SpoU	rRNA	Methylase	family
NitrOD5	PF11537.8	gi|284162463|ref|YP_003401086.1|	-	1.4e-43	147.0	1.4	1.5e-43	146.8	1.4	1.0	1	0	0	1	1	1	1	Nitrosopumilus	output	domain	5
ATPase	PF06745.13	gi|284162464|ref|YP_003401087.1|	-	4.5e-92	307.6	3.8	2.3e-48	164.6	0.1	2.0	2	0	0	2	2	2	2	KaiC
AAA_25	PF13481.6	gi|284162464|ref|YP_003401087.1|	-	2.6e-17	63.0	0.0	1.2e-07	31.5	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
DnaB_C	PF03796.15	gi|284162464|ref|YP_003401087.1|	-	5.8e-16	58.6	0.2	4.4e-07	29.5	0.0	2.8	2	1	0	3	3	3	2	DnaB-like	helicase	C	terminal	domain
RecA	PF00154.21	gi|284162464|ref|YP_003401087.1|	-	4.4e-13	49.3	0.0	1.5e-05	24.7	0.0	2.3	2	0	0	2	2	2	2	recA	bacterial	DNA	recombination	protein
AAA_24	PF13479.6	gi|284162464|ref|YP_003401087.1|	-	1e-12	48.2	0.2	2.2e-05	24.3	0.1	2.4	2	0	0	2	2	2	2	AAA	domain
Rad51	PF08423.11	gi|284162464|ref|YP_003401087.1|	-	1.6e-12	47.3	1.0	1.4e-08	34.3	0.1	2.9	2	1	0	2	2	2	2	Rad51
IstB_IS21	PF01695.17	gi|284162464|ref|YP_003401087.1|	-	1.1e-09	38.3	0.4	3.9e-05	23.5	0.0	2.9	4	0	0	4	4	2	2	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|284162464|ref|YP_003401087.1|	-	4.4e-09	36.5	0.0	0.0071	16.3	0.0	3.2	3	0	0	3	3	3	2	NACHT	domain
AAA_22	PF13401.6	gi|284162464|ref|YP_003401087.1|	-	7e-09	36.1	0.2	0.0026	18.0	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
DUF2075	PF09848.9	gi|284162464|ref|YP_003401087.1|	-	9.6e-08	31.7	0.2	0.0033	16.7	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_16	PF13191.6	gi|284162464|ref|YP_003401087.1|	-	3.3e-07	30.8	0.8	0.00081	19.8	0.0	3.0	2	1	0	2	2	2	1	AAA	ATPase	domain
ABC_tran	PF00005.27	gi|284162464|ref|YP_003401087.1|	-	3.6e-07	30.8	2.2	0.0016	18.9	0.0	2.5	2	1	0	2	2	2	2	ABC	transporter
GvpD	PF07088.11	gi|284162464|ref|YP_003401087.1|	-	9.7e-07	27.8	4.2	0.0024	16.6	0.5	3.3	1	1	1	2	2	2	2	GvpD	gas	vesicle	protein
AAA	PF00004.29	gi|284162464|ref|YP_003401087.1|	-	1.6e-06	28.6	2.4	7.7e-05	23.1	0.1	2.6	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SSE	PF00437.20	gi|284162464|ref|YP_003401087.1|	-	4.8e-06	25.8	1.2	0.025	13.7	0.1	2.4	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
SRP54	PF00448.22	gi|284162464|ref|YP_003401087.1|	-	1.6e-05	24.6	0.1	0.0082	15.8	0.0	2.5	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.6	gi|284162464|ref|YP_003401087.1|	-	2.9e-05	23.9	0.6	0.034	13.9	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|284162464|ref|YP_003401087.1|	-	2.9e-05	24.1	0.5	0.067	13.2	0.1	2.8	2	2	0	2	2	2	2	AAA	domain
PhoH	PF02562.16	gi|284162464|ref|YP_003401087.1|	-	3.2e-05	23.5	0.6	0.038	13.4	0.0	2.4	2	0	0	2	2	2	2	PhoH-like	protein
CbiA	PF01656.23	gi|284162464|ref|YP_003401087.1|	-	3.7e-05	23.8	2.5	0.049	13.7	0.0	2.8	2	1	0	2	2	2	2	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ResIII	PF04851.15	gi|284162464|ref|YP_003401087.1|	-	4.5e-05	23.5	0.1	0.2	11.7	0.0	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|284162464|ref|YP_003401087.1|	-	4.6e-05	23.3	0.1	0.1	12.3	0.0	2.4	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
ArsA_ATPase	PF02374.15	gi|284162464|ref|YP_003401087.1|	-	5.3e-05	22.6	0.2	0.0033	16.7	0.1	2.3	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_10	PF12846.7	gi|284162464|ref|YP_003401087.1|	-	6.3e-05	22.1	0.3	0.044	12.7	0.1	2.2	2	0	0	2	2	2	2	AAA-like	domain
ATPase_2	PF01637.18	gi|284162464|ref|YP_003401087.1|	-	7.7e-05	22.7	0.8	0.071	13.0	0.0	2.6	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
Zeta_toxin	PF06414.12	gi|284162464|ref|YP_003401087.1|	-	9.2e-05	21.8	0.5	0.034	13.4	0.0	2.7	3	0	0	3	3	2	1	Zeta	toxin
MeaB	PF03308.16	gi|284162464|ref|YP_003401087.1|	-	9.4e-05	21.5	0.3	0.00053	19.0	0.0	2.1	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Sigma54_activat	PF00158.26	gi|284162464|ref|YP_003401087.1|	-	0.00023	20.9	0.1	0.1	12.3	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_7	PF12775.7	gi|284162464|ref|YP_003401087.1|	-	0.00029	20.4	0.5	0.13	11.7	0.0	2.6	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_29	PF13555.6	gi|284162464|ref|YP_003401087.1|	-	0.00034	20.3	6.7	0.023	14.4	0.1	2.9	3	0	0	3	3	2	1	P-loop	containing	region	of	AAA	domain
TIP49	PF06068.13	gi|284162464|ref|YP_003401087.1|	-	0.0008	18.7	0.1	0.014	14.6	0.0	2.3	2	0	0	2	2	2	1	TIP49	P-loop	domain
RsgA_GTPase	PF03193.16	gi|284162464|ref|YP_003401087.1|	-	0.00082	19.3	0.4	1.4	8.8	0.0	2.7	2	0	0	2	2	2	1	RsgA	GTPase
cobW	PF02492.19	gi|284162464|ref|YP_003401087.1|	-	0.00093	18.8	1.0	0.19	11.3	0.0	2.5	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|284162464|ref|YP_003401087.1|	-	0.0011	19.5	5.2	0.057	14.0	0.1	3.2	2	2	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.23	gi|284162464|ref|YP_003401087.1|	-	0.0012	18.9	0.5	0.09	12.9	0.0	2.7	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_28	PF13521.6	gi|284162464|ref|YP_003401087.1|	-	0.0015	18.8	0.0	0.13	12.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|284162464|ref|YP_003401087.1|	-	0.002	18.0	1.9	0.18	11.6	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|284162464|ref|YP_003401087.1|	-	0.004	17.7	8.3	0.46	11.0	0.2	2.7	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|284162464|ref|YP_003401087.1|	-	0.0046	17.3	0.1	0.26	11.7	0.0	2.4	2	0	0	2	2	2	1	RNA	helicase
TsaE	PF02367.17	gi|284162464|ref|YP_003401087.1|	-	0.0046	16.9	1.4	0.76	9.8	0.1	2.5	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_5	PF07728.14	gi|284162464|ref|YP_003401087.1|	-	0.0048	16.9	0.4	0.22	11.5	0.1	2.7	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.6	gi|284162464|ref|YP_003401087.1|	-	0.0057	17.0	4.8	0.058	13.7	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_35	PF14516.6	gi|284162464|ref|YP_003401087.1|	-	0.0087	14.9	0.0	0.84	8.4	0.0	2.3	2	1	0	2	2	2	1	AAA-like	domain
DLIC	PF05783.11	gi|284162464|ref|YP_003401087.1|	-	0.009	14.9	0.0	0.018	13.9	0.0	1.4	1	0	0	1	1	1	1	Dynein	light	intermediate	chain	(DLIC)
FMN_dh	PF01070.18	gi|284162464|ref|YP_003401087.1|	-	0.009	15.1	0.0	0.014	14.5	0.0	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Roc	PF08477.13	gi|284162464|ref|YP_003401087.1|	-	0.01	16.0	0.2	1.5	9.1	0.0	2.4	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_33	PF13671.6	gi|284162464|ref|YP_003401087.1|	-	0.011	15.9	0.0	1.1	9.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_31	PF13614.6	gi|284162464|ref|YP_003401087.1|	-	0.012	15.6	1.4	0.24	11.3	0.2	2.5	2	1	0	3	3	2	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|284162464|ref|YP_003401087.1|	-	0.012	15.3	0.1	1.6	8.3	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
FtsK_SpoIIIE	PF01580.18	gi|284162464|ref|YP_003401087.1|	-	0.02	14.3	1.6	3.6	6.9	0.1	2.8	3	0	0	3	3	3	0	FtsK/SpoIIIE	family
Elong_Iki1	PF10483.9	gi|284162464|ref|YP_003401087.1|	-	0.037	13.5	0.0	0.31	10.5	0.0	2.0	2	0	0	2	2	2	0	Elongator	subunit	Iki1
Septin	PF00735.18	gi|284162464|ref|YP_003401087.1|	-	0.044	13.1	0.6	1.7	7.9	0.0	2.5	2	1	0	2	2	2	0	Septin
NTPase_1	PF03266.15	gi|284162464|ref|YP_003401087.1|	-	0.049	13.5	0.3	0.049	13.5	0.3	3.9	3	1	0	4	4	4	0	NTPase
ATP_bind_1	PF03029.17	gi|284162464|ref|YP_003401087.1|	-	0.05	13.4	0.2	2.3	7.9	0.0	2.5	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.14	gi|284162464|ref|YP_003401087.1|	-	0.057	13.3	1.1	2.9	7.8	0.1	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TrwB_AAD_bind	PF10412.9	gi|284162464|ref|YP_003401087.1|	-	0.059	12.3	1.7	1.4	7.8	0.1	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.12	gi|284162464|ref|YP_003401087.1|	-	0.059	13.0	0.0	4.6	6.8	0.0	2.3	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
SecA_DEAD	PF07517.14	gi|284162464|ref|YP_003401087.1|	-	0.066	12.5	1.5	0.087	12.1	0.1	1.9	2	0	0	2	2	1	0	SecA	DEAD-like	domain
RuvB_N	PF05496.12	gi|284162464|ref|YP_003401087.1|	-	0.074	12.8	0.1	0.32	10.7	0.0	2.2	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Viral_helicase1	PF01443.18	gi|284162464|ref|YP_003401087.1|	-	0.078	12.7	0.1	4	7.1	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Bac_DnaA	PF00308.18	gi|284162464|ref|YP_003401087.1|	-	0.12	12.2	0.2	2	8.2	0.0	2.5	2	1	0	2	2	2	0	Bacterial	dnaA	protein
NB-ARC	PF00931.22	gi|284162464|ref|YP_003401087.1|	-	0.17	11.0	1.4	1.4	8.1	0.2	2.2	2	0	0	2	2	2	0	NB-ARC	domain
PduV-EutP	PF10662.9	gi|284162464|ref|YP_003401087.1|	-	0.68	9.7	3.4	2.1	8.1	0.1	2.5	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
FeoB_N	PF02421.18	gi|284162464|ref|YP_003401087.1|	-	0.97	9.0	4.5	5.5	6.5	0.1	2.8	3	0	0	3	3	2	0	Ferrous	iron	transport	protein	B
UvrD-helicase	PF00580.21	gi|284162464|ref|YP_003401087.1|	-	0.99	8.9	2.8	1.4	8.4	0.1	2.2	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
HTH_5	PF01022.20	gi|284162465|ref|YP_003401088.1|	-	6.7e-12	45.1	0.0	1.1e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.6	gi|284162465|ref|YP_003401088.1|	-	5.7e-09	35.8	0.0	8.5e-09	35.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HxlR	PF01638.17	gi|284162465|ref|YP_003401088.1|	-	0.0002	21.2	0.2	0.00055	19.7	0.2	1.7	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
MarR	PF01047.22	gi|284162465|ref|YP_003401088.1|	-	0.12	12.4	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	MarR	family
MCPsignal	PF00015.21	gi|284162466|ref|YP_003401089.1|	-	1.4e-44	152.0	49.1	2.9e-40	137.9	17.3	4.2	2	1	2	4	4	4	3	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF948	PF06103.11	gi|284162466|ref|YP_003401089.1|	-	1.8e-10	40.9	27.5	0.055	13.7	0.9	6.5	3	3	3	6	6	6	5	Bacterial	protein	of	unknown	function	(DUF948)
HAMP	PF00672.25	gi|284162466|ref|YP_003401089.1|	-	2e-08	34.4	4.7	0.00046	20.5	0.0	6.9	6	4	1	7	7	6	1	HAMP	domain
PhageMin_Tail	PF10145.9	gi|284162466|ref|YP_003401089.1|	-	0.00022	21.2	30.2	0.001	18.9	3.6	3.7	2	2	2	4	4	3	1	Phage-related	minor	tail	protein
Syntaxin_2	PF14523.6	gi|284162466|ref|YP_003401089.1|	-	0.00033	21.0	23.5	26	5.3	2.4	5.6	2	2	1	3	3	3	0	Syntaxin-like	protein
Laminin_II	PF06009.12	gi|284162466|ref|YP_003401089.1|	-	0.0077	16.2	40.5	1.1	9.3	5.4	5.3	3	2	2	5	5	5	3	Laminin	Domain	II
HAMP_N3	PF18575.1	gi|284162466|ref|YP_003401089.1|	-	0.0087	15.6	0.0	0.89	9.2	0.0	4.0	4	0	0	4	4	2	1	HAMP	N-terminal	domain	3
DUF1664	PF07889.12	gi|284162466|ref|YP_003401089.1|	-	0.025	14.6	28.1	0.051	13.6	0.3	4.9	3	2	2	5	5	5	0	Protein	of	unknown	function	(DUF1664)
MmoB_DmpM	PF02406.17	gi|284162466|ref|YP_003401089.1|	-	0.034	14.4	1.0	1.1	9.5	0.3	3.2	2	1	0	2	2	2	0	MmoB/DmpM	family
T4SS	PF07996.11	gi|284162466|ref|YP_003401089.1|	-	0.047	14.1	32.0	0.031	14.7	16.5	2.9	3	1	0	3	3	2	0	Type	IV	secretion	system	proteins
GARP	PF16731.5	gi|284162466|ref|YP_003401089.1|	-	0.081	12.6	49.1	0.077	12.7	16.3	4.2	2	2	3	5	5	5	0	Glutamic	acid/alanine-rich	protein	of	Trypanosoma
FUSC	PF04632.12	gi|284162466|ref|YP_003401089.1|	-	0.11	11.0	13.7	0.75	8.2	2.7	2.3	1	1	1	2	2	2	0	Fusaric	acid	resistance	protein	family
ING	PF12998.7	gi|284162466|ref|YP_003401089.1|	-	0.14	12.7	15.9	1.8	9.2	0.1	4.4	3	2	1	4	4	3	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Occludin_ELL	PF07303.13	gi|284162466|ref|YP_003401089.1|	-	0.14	12.9	16.3	7.6	7.3	0.2	6.0	3	3	4	7	7	7	0	Occludin	homology	domain
BLOC1_2	PF10046.9	gi|284162466|ref|YP_003401089.1|	-	0.16	12.3	29.9	2.1	8.7	2.5	6.7	3	2	4	7	7	7	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4795	PF16043.5	gi|284162466|ref|YP_003401089.1|	-	0.18	11.4	25.6	0.043	13.4	9.5	3.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4795)
WXG100	PF06013.12	gi|284162466|ref|YP_003401089.1|	-	0.21	11.8	28.4	15	5.9	5.7	7.5	4	2	2	7	7	7	0	Proteins	of	100	residues	with	WXG
EzrA	PF06160.12	gi|284162466|ref|YP_003401089.1|	-	0.22	9.7	31.3	3.4	5.7	21.7	2.8	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
DUF3734	PF12536.8	gi|284162466|ref|YP_003401089.1|	-	0.23	11.8	9.8	1.7	9.0	1.2	3.4	2	2	1	3	3	3	0	Patatin	phospholipase
Alanine_zipper	PF11839.8	gi|284162466|ref|YP_003401089.1|	-	0.25	11.7	0.0	0.25	11.7	0.0	5.0	2	2	1	4	4	3	0	Alanine-zipper,	major	outer	membrane	lipoprotein
Mce4_CUP1	PF11887.8	gi|284162466|ref|YP_003401089.1|	-	0.31	10.5	13.5	0.046	13.2	2.3	3.0	1	1	1	3	3	3	0	Cholesterol	uptake	porter	CUP1	of	Mce4,	putative
Ins_allergen_rp	PF06757.13	gi|284162466|ref|YP_003401089.1|	-	0.31	11.0	6.6	10	6.0	0.4	4.5	2	1	1	4	4	4	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
DUF2203	PF09969.9	gi|284162466|ref|YP_003401089.1|	-	0.34	11.6	33.4	1.4	9.6	3.0	5.4	1	1	3	5	5	5	0	Uncharacterized	conserved	protein	(DUF2203)
Spc7	PF08317.11	gi|284162466|ref|YP_003401089.1|	-	0.37	9.6	32.1	0.14	11.0	5.3	3.6	2	1	2	4	4	4	0	Spc7	kinetochore	protein
Mod_r	PF07200.13	gi|284162466|ref|YP_003401089.1|	-	0.45	10.6	23.4	0.4	10.8	1.7	4.0	1	1	3	4	4	4	0	Modifier	of	rudimentary	(Mod(r))	protein
Sec34	PF04136.15	gi|284162466|ref|YP_003401089.1|	-	0.54	10.1	21.7	6.3	6.7	0.6	5.2	3	2	2	5	5	5	0	Sec34-like	family
DUF1759	PF03564.15	gi|284162466|ref|YP_003401089.1|	-	0.88	9.5	16.3	1.2	9.0	0.4	5.1	2	1	0	5	5	5	0	Protein	of	unknown	function	(DUF1759)
LOH1CR12	PF10158.9	gi|284162466|ref|YP_003401089.1|	-	1.3	9.0	21.4	7.1	6.7	3.4	5.4	1	1	4	5	5	5	0	Tumour	suppressor	protein
APG17	PF04108.12	gi|284162466|ref|YP_003401089.1|	-	1.7	7.7	31.3	3.7	6.5	2.2	4.7	1	1	3	5	5	5	0	Autophagy	protein	Apg17
DASH_Dam1	PF08653.10	gi|284162466|ref|YP_003401089.1|	-	1.8	8.4	9.8	25	4.7	0.1	5.7	6	2	0	7	7	3	0	DASH	complex	subunit	Dam1
HisKA	PF00512.25	gi|284162466|ref|YP_003401089.1|	-	1.9	8.6	13.5	6.8	6.8	0.4	5.7	2	1	1	3	3	2	0	His	Kinase	A	(phospho-acceptor)	domain
Spectrin	PF00435.21	gi|284162466|ref|YP_003401089.1|	-	1.9	9.0	18.8	7.1	7.2	0.0	4.6	2	1	1	4	4	4	0	Spectrin	repeat
Laminin_I	PF06008.14	gi|284162466|ref|YP_003401089.1|	-	2	8.1	36.1	0.1	12.3	8.2	4.2	1	1	2	4	4	4	0	Laminin	Domain	I
DUF812	PF05667.11	gi|284162466|ref|YP_003401089.1|	-	2.1	7.2	34.3	47	2.7	21.9	3.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
Serine_rich	PF08824.10	gi|284162466|ref|YP_003401089.1|	-	2.1	8.3	19.3	1.9	8.5	5.7	3.8	2	1	3	5	5	5	0	Serine	rich	protein	interaction	domain
DASH_Dad4	PF08650.10	gi|284162466|ref|YP_003401089.1|	-	2.5	8.2	19.3	7.6	6.6	2.6	5.7	3	2	1	5	5	5	0	DASH	complex	subunit	Dad4
Jnk-SapK_ap_N	PF09744.9	gi|284162466|ref|YP_003401089.1|	-	2.5	8.3	27.0	0.16	12.1	4.8	4.2	2	1	2	4	4	4	0	JNK_SAPK-associated	protein-1
Lipoprotein_7	PF01540.16	gi|284162466|ref|YP_003401089.1|	-	2.8	7.2	35.1	8.6	5.5	9.1	4.3	1	1	2	3	3	3	0	Adhesin	lipoprotein
Phasin_2	PF09361.10	gi|284162466|ref|YP_003401089.1|	-	2.9	8.2	32.3	0.62	10.4	0.5	4.7	2	2	1	3	3	3	0	Phasin	protein
Rota_NSP4	PF01452.16	gi|284162466|ref|YP_003401089.1|	-	3.4	7.3	7.3	2.8	7.6	0.4	3.1	2	1	0	3	3	3	0	Rotavirus	non	structural	protein
CREPT	PF16566.5	gi|284162466|ref|YP_003401089.1|	-	3.8	7.7	20.1	1.2	9.3	3.9	3.4	2	1	1	3	3	3	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
YkyA	PF10368.9	gi|284162466|ref|YP_003401089.1|	-	6	6.5	42.3	2.2	7.9	9.1	4.7	2	2	2	4	4	4	0	Putative	cell-wall	binding	lipoprotein
Fib_alpha	PF08702.10	gi|284162466|ref|YP_003401089.1|	-	6.3	7.0	29.0	11	6.2	0.2	4.8	2	2	3	5	5	5	0	Fibrinogen	alpha/beta	chain	family
DUF4611	PF15387.6	gi|284162466|ref|YP_003401089.1|	-	6.5	7.0	7.4	3.4	8.0	0.4	3.8	3	1	0	3	3	2	0	Domain	of	unknown	function	(DUF4611)
DASH_Duo1	PF08651.10	gi|284162466|ref|YP_003401089.1|	-	7.3	6.4	20.8	11	5.9	0.4	6.3	6	2	1	7	7	5	0	DASH	complex	subunit	Duo1
DUF1798	PF08807.10	gi|284162466|ref|YP_003401089.1|	-	7.7	6.7	8.7	5.4	7.2	0.4	4.0	2	2	2	4	4	4	0	Bacterial	domain	of	unknown	function	(DUF1798)
HeLo	PF14479.6	gi|284162466|ref|YP_003401089.1|	-	8.4	6.2	15.0	43	3.9	4.7	4.1	2	2	1	3	3	3	0	Prion-inhibition	and	propagation
DUF883	PF05957.13	gi|284162466|ref|YP_003401089.1|	-	9	7.0	32.9	1.8	9.2	1.9	6.2	2	2	2	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF883)
HTH_45	PF14947.6	gi|284162467|ref|YP_003401090.1|	-	1.3e-12	47.5	0.1	1.6e-12	47.2	0.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_5	PF01022.20	gi|284162467|ref|YP_003401090.1|	-	2e-07	30.8	0.3	2.9e-07	30.3	0.1	1.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|284162467|ref|YP_003401090.1|	-	0.0011	18.4	0.0	0.0016	17.9	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.10	gi|284162467|ref|YP_003401090.1|	-	0.0018	18.0	0.0	0.0037	17.0	0.0	1.5	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.7	gi|284162467|ref|YP_003401090.1|	-	0.048	13.7	0.0	0.061	13.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR	PF01047.22	gi|284162467|ref|YP_003401090.1|	-	0.076	13.0	0.0	0.11	12.4	0.0	1.2	1	0	0	1	1	1	0	MarR	family
DUF3545	PF12065.8	gi|284162468|ref|YP_003401091.1|	-	0.044	13.8	7.1	0.071	13.1	6.5	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3545)
PIN	PF01850.21	gi|284162469|ref|YP_003401092.1|	-	6.9e-06	26.6	0.5	8.9e-06	26.2	0.5	1.2	1	0	0	1	1	1	1	PIN	domain
Arg_tRNA_synt_N	PF03485.16	gi|284162469|ref|YP_003401092.1|	-	0.00071	20.1	0.0	0.0013	19.2	0.0	1.5	1	1	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
DUF2373	PF10180.9	gi|284162469|ref|YP_003401092.1|	-	0.033	14.0	0.1	0.083	12.8	0.0	1.7	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2373)
Ribosomal_S7	PF00177.21	gi|284162469|ref|YP_003401092.1|	-	0.11	12.2	0.0	0.13	11.9	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S7p/S5e
FOP_dimer	PF09398.10	gi|284162469|ref|YP_003401092.1|	-	0.13	12.5	0.4	0.9	9.8	0.5	2.2	1	1	1	2	2	2	0	FOP	N	terminal	dimerisation	domain
LisH_2	PF16045.5	gi|284162469|ref|YP_003401092.1|	-	0.22	10.6	0.2	0.41	9.7	0.2	1.5	1	0	0	1	1	1	0	LisH
CheR	PF01739.18	gi|284162470|ref|YP_003401093.1|	-	4.4e-65	218.8	0.0	5.7e-65	218.5	0.0	1.1	1	0	0	1	1	1	1	CheR	methyltransferase,	SAM	binding	domain
CheR_N	PF03705.15	gi|284162470|ref|YP_003401093.1|	-	1.1e-12	47.4	4.3	2.7e-12	46.2	4.3	1.7	1	0	0	1	1	1	1	CheR	methyltransferase,	all-alpha	domain
Methyltransf_25	PF13649.6	gi|284162470|ref|YP_003401093.1|	-	2.3e-07	31.4	0.0	0.0002	22.0	0.0	3.0	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|284162470|ref|YP_003401093.1|	-	6.7e-07	30.0	0.0	1.4e-06	28.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|284162470|ref|YP_003401093.1|	-	5.4e-05	23.8	0.2	0.0058	17.3	0.1	3.2	2	2	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|284162470|ref|YP_003401093.1|	-	0.001	18.9	0.1	0.0069	16.2	0.1	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|284162470|ref|YP_003401093.1|	-	0.0025	17.7	0.0	0.004	17.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
FAM86	PF14904.6	gi|284162470|ref|YP_003401093.1|	-	0.027	14.6	0.1	0.064	13.3	0.1	1.6	1	0	0	1	1	1	0	Family	of	unknown	function
CheD	PF03975.13	gi|284162471|ref|YP_003401094.1|	-	6.1e-32	110.0	0.2	8.4e-32	109.5	0.2	1.2	1	0	0	1	1	1	1	CheD	chemotactic	sensory	transduction
CheC	PF04509.12	gi|284162472|ref|YP_003401095.1|	-	5.2e-27	93.4	3.5	1.3e-12	47.4	0.0	2.7	3	0	0	3	3	3	2	CheC-like	family
CheX	PF13690.6	gi|284162472|ref|YP_003401095.1|	-	9.3e-09	35.4	0.6	0.0012	19.0	0.1	2.3	2	0	0	2	2	2	2	Chemotaxis	phosphatase	CheX
CheW	PF01584.19	gi|284162473|ref|YP_003401096.1|	-	1.2e-23	83.3	1.7	2e-23	82.5	0.3	2.2	2	0	0	2	2	2	1	CheW-like	domain
HATPase_c	PF02518.26	gi|284162473|ref|YP_003401096.1|	-	4.7e-22	78.6	1.8	8.8e-22	77.7	0.4	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Hpt	PF01627.23	gi|284162473|ref|YP_003401096.1|	-	7.9e-19	67.7	0.0	2.3e-18	66.2	0.0	1.9	1	0	0	1	1	1	1	Hpt	domain
P2	PF07194.11	gi|284162473|ref|YP_003401096.1|	-	5.6e-18	64.8	0.6	5.6e-18	64.8	0.6	3.0	2	0	0	2	2	2	1	P2	response	regulator	binding	domain
H-kinase_dim	PF02895.14	gi|284162473|ref|YP_003401096.1|	-	2e-13	50.5	0.9	2e-13	50.5	0.9	2.4	2	0	0	2	2	1	1	Signal	transducing	histidine	kinase,	homodimeric	domain
HATPase_c_3	PF13589.6	gi|284162473|ref|YP_003401096.1|	-	9e-05	22.3	2.6	0.0023	17.7	2.6	2.5	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_2	PF13581.6	gi|284162473|ref|YP_003401096.1|	-	0.0056	16.6	0.1	0.012	15.6	0.1	1.6	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c_5	PF14501.6	gi|284162473|ref|YP_003401096.1|	-	0.0097	15.8	1.7	0.037	13.9	1.7	2.0	1	1	0	1	1	1	1	GHKL	domain
GP3_package	PF16677.5	gi|284162473|ref|YP_003401096.1|	-	0.032	14.4	1.7	0.074	13.2	0.1	2.4	2	1	0	2	2	2	0	DNA-packaging	protein	gp3
Exonuc_VII_S	PF02609.16	gi|284162473|ref|YP_003401096.1|	-	0.12	12.5	2.2	0.32	11.1	0.6	2.7	2	0	0	2	2	2	0	Exonuclease	VII	small	subunit
DUF4535	PF15054.6	gi|284162473|ref|YP_003401096.1|	-	0.16	11.7	0.7	1.2	8.9	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4535)
DUF4342	PF14242.6	gi|284162473|ref|YP_003401096.1|	-	5.1	7.2	8.7	1.8	8.6	0.1	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4342)
RNase_H2-Ydr279	PF09468.10	gi|284162473|ref|YP_003401096.1|	-	7.3	6.8	6.9	28	4.9	6.1	2.4	1	1	0	1	1	1	0	Ydr279p	protein	family	(RNase	H2	complex	component)	wHTH	domain
CheB_methylest	PF01339.17	gi|284162474|ref|YP_003401097.1|	-	6.6e-65	218.0	0.7	1.3e-64	217.1	0.3	1.6	2	0	0	2	2	2	1	CheB	methylesterase
Response_reg	PF00072.24	gi|284162474|ref|YP_003401097.1|	-	9e-25	87.0	1.7	1.6e-24	86.2	0.3	2.1	2	1	0	2	2	2	1	Response	regulator	receiver	domain
Peripla_BP_2	PF01497.18	gi|284162474|ref|YP_003401097.1|	-	0.032	13.8	0.2	0.1	12.2	0.2	1.9	1	1	0	1	1	1	0	Periplasmic	binding	protein
Response_reg	PF00072.24	gi|284162475|ref|YP_003401098.1|	-	1.9e-33	115.0	0.8	2.1e-33	114.8	0.8	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
B12-binding	PF02310.19	gi|284162475|ref|YP_003401098.1|	-	0.028	14.4	0.1	0.056	13.5	0.1	1.6	1	1	0	1	1	1	0	B12	binding	domain
CheF-arch	PF04283.12	gi|284162476|ref|YP_003401099.1|	-	2.7e-20	73.1	0.2	1.4e-18	67.4	0.1	2.7	1	1	2	3	3	3	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
HTH_45	PF14947.6	gi|284162476|ref|YP_003401099.1|	-	0.0057	16.6	0.2	0.1	12.6	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix
MerR_2	PF13591.6	gi|284162476|ref|YP_003401099.1|	-	0.011	15.5	0.3	0.056	13.3	0.0	2.2	2	1	0	2	2	2	0	MerR	HTH	family	regulatory	protein
CheW	PF01584.19	gi|284162477|ref|YP_003401100.1|	-	4.7e-41	139.7	0.7	5.3e-41	139.5	0.7	1.0	1	0	0	1	1	1	1	CheW-like	domain
Antimicrobial_3	PF08025.11	gi|284162477|ref|YP_003401100.1|	-	0.083	12.8	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Spider	antimicrobial	peptide
MCPsignal	PF00015.21	gi|284162478|ref|YP_003401101.1|	-	2.3e-43	148.0	48.0	2.8e-41	141.2	20.3	5.3	2	2	3	5	5	5	4	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
PAS_4	PF08448.10	gi|284162478|ref|YP_003401101.1|	-	6.6e-42	142.2	0.0	8.8e-14	51.7	0.0	5.2	5	1	0	5	5	4	4	PAS	fold
PAS	PF00989.25	gi|284162478|ref|YP_003401101.1|	-	9.9e-38	128.6	0.0	1.2e-12	47.9	0.0	5.1	4	1	0	4	4	4	4	PAS	fold
PAS_9	PF13426.7	gi|284162478|ref|YP_003401101.1|	-	1e-37	128.5	16.4	1.6e-12	47.6	0.3	6.2	7	1	0	7	7	5	3	PAS	domain
PAS_8	PF13188.7	gi|284162478|ref|YP_003401101.1|	-	1.8e-27	94.8	0.0	2.1e-05	24.4	0.0	5.4	5	0	0	5	5	5	4	PAS	domain
PAS_10	PF13596.6	gi|284162478|ref|YP_003401101.1|	-	1.1e-13	51.7	8.3	8.5e-05	23.1	0.0	5.8	6	1	1	7	7	4	3	PAS	domain
PAS_7	PF12860.7	gi|284162478|ref|YP_003401101.1|	-	6.1e-08	32.8	15.4	0.051	13.7	0.0	6.8	7	4	0	7	7	5	3	PAS	fold
DUF948	PF06103.11	gi|284162478|ref|YP_003401101.1|	-	2.1e-07	31.1	35.7	0.08	13.2	4.2	7.0	6	2	2	8	8	6	3	Bacterial	protein	of	unknown	function	(DUF948)
H_kinase_N	PF12282.8	gi|284162478|ref|YP_003401101.1|	-	1.3e-06	28.4	0.2	0.00046	20.2	0.0	3.1	2	0	0	2	2	2	1	Signal	transduction	histidine	kinase
PAS_12	PF18095.1	gi|284162478|ref|YP_003401101.1|	-	1.6e-05	24.6	0.0	4.1	7.0	0.1	4.8	4	0	0	4	4	4	1	UPF0242	C-terminal	PAS-like	domain
EzrA	PF06160.12	gi|284162478|ref|YP_003401101.1|	-	8e-05	21.0	37.3	0.0013	17.0	14.7	3.7	4	0	0	4	4	4	2	Septation	ring	formation	regulator,	EzrA
dCache_1	PF02743.18	gi|284162478|ref|YP_003401101.1|	-	0.00018	21.4	0.0	0.00018	21.4	0.0	4.7	3	2	3	6	6	5	1	Cache	domain
GAF_2	PF13185.6	gi|284162478|ref|YP_003401101.1|	-	0.0086	16.4	0.0	0.036	14.3	0.0	2.1	2	0	0	2	2	1	1	GAF	domain
Seryl_tRNA_N	PF02403.22	gi|284162478|ref|YP_003401101.1|	-	0.013	15.8	0.5	0.013	15.8	0.5	6.5	4	1	2	7	7	5	0	Seryl-tRNA	synthetase	N-terminal	domain
Syntaxin_2	PF14523.6	gi|284162478|ref|YP_003401101.1|	-	0.02	15.2	23.0	4.9	7.6	0.1	6.5	3	1	1	4	4	4	0	Syntaxin-like	protein
Phasin_2	PF09361.10	gi|284162478|ref|YP_003401101.1|	-	0.025	14.8	0.3	0.025	14.8	0.3	4.5	2	1	2	4	4	4	0	Phasin	protein
PAS_3	PF08447.12	gi|284162478|ref|YP_003401101.1|	-	0.029	14.6	0.0	3.6	7.9	0.0	3.0	2	0	0	2	2	2	0	PAS	fold
Laminin_II	PF06009.12	gi|284162478|ref|YP_003401101.1|	-	0.03	14.4	46.1	0.029	14.4	8.2	6.5	5	2	2	7	7	7	0	Laminin	Domain	II
T3SSipB	PF16535.5	gi|284162478|ref|YP_003401101.1|	-	0.033	14.7	24.1	0.97	9.9	1.4	4.3	3	1	1	4	4	4	0	Type	III	cell	invasion	protein	SipB
ApoC-I	PF04691.12	gi|284162478|ref|YP_003401101.1|	-	0.048	13.6	11.8	0.17	11.9	0.0	5.7	6	0	0	6	6	4	0	Apolipoprotein	C-I	(ApoC-1)
BAR	PF03114.18	gi|284162478|ref|YP_003401101.1|	-	0.068	12.8	16.4	0.25	11.0	0.1	4.4	3	2	0	3	3	3	0	BAR	domain
GAF	PF01590.26	gi|284162478|ref|YP_003401101.1|	-	0.15	12.7	0.0	0.89	10.2	0.0	2.2	1	1	1	2	2	2	0	GAF	domain
Mce4_CUP1	PF11887.8	gi|284162478|ref|YP_003401101.1|	-	0.18	11.3	10.9	0.81	9.1	0.7	3.9	2	2	1	4	4	4	0	Cholesterol	uptake	porter	CUP1	of	Mce4,	putative
Med30	PF11315.8	gi|284162478|ref|YP_003401101.1|	-	0.21	11.8	19.3	0.068	13.4	8.1	4.6	5	0	0	5	5	4	0	Mediator	complex	subunit	30
KIX_2	PF16987.5	gi|284162478|ref|YP_003401101.1|	-	0.23	11.5	11.9	0.073	13.1	3.9	3.7	2	2	1	3	3	3	0	KIX	domain
T7SS_ESX_EspC	PF10824.8	gi|284162478|ref|YP_003401101.1|	-	0.78	10.2	16.8	2.4	8.7	0.6	4.2	4	1	0	4	4	3	0	Excreted	virulence	factor	EspC,	type	VII	ESX	diderm
APG17	PF04108.12	gi|284162478|ref|YP_003401101.1|	-	0.79	8.8	31.7	1.6	7.8	23.7	3.7	3	1	1	4	4	4	0	Autophagy	protein	Apg17
TSC22	PF01166.18	gi|284162478|ref|YP_003401101.1|	-	0.85	10.0	5.8	2.2	8.7	1.8	3.9	2	0	0	2	2	2	0	TSC-22/dip/bun	family
Barstar	PF01337.18	gi|284162478|ref|YP_003401101.1|	-	0.86	9.7	3.0	42	4.2	0.0	4.5	4	0	0	4	4	4	0	Barstar	(barnase	inhibitor)
BORCS8	PF10167.9	gi|284162478|ref|YP_003401101.1|	-	0.95	9.4	20.3	4	7.4	0.8	5.7	3	2	1	5	5	5	0	BLOC-1-related	complex	sub-unit	8
HAMP	PF00672.25	gi|284162478|ref|YP_003401101.1|	-	1.1	9.7	6.3	85	3.6	0.4	5.6	5	2	0	5	5	3	0	HAMP	domain
Prominin	PF05478.11	gi|284162478|ref|YP_003401101.1|	-	1.1	7.1	19.7	3.1	5.6	0.4	3.4	2	1	1	3	3	3	0	Prominin
FlgN	PF05130.12	gi|284162478|ref|YP_003401101.1|	-	1.9	9.0	27.8	3.3	8.2	2.3	5.1	2	1	3	5	5	5	0	FlgN	protein
YppG	PF14179.6	gi|284162478|ref|YP_003401101.1|	-	2.4	8.9	3.7	4.6	8.0	0.0	3.1	3	0	0	3	3	3	0	YppG-like	protein
TarH	PF02203.15	gi|284162478|ref|YP_003401101.1|	-	2.6	7.9	12.9	6.3	6.7	4.6	3.2	2	1	1	3	3	3	0	Tar	ligand	binding	domain	homologue
Abi_C	PF14355.6	gi|284162478|ref|YP_003401101.1|	-	2.9	8.1	5.3	29	4.9	0.2	4.4	3	1	1	4	4	4	0	Abortive	infection	C-terminus
Sec34	PF04136.15	gi|284162478|ref|YP_003401101.1|	-	2.9	7.8	25.8	0.19	11.6	0.7	5.8	5	1	1	6	6	6	0	Sec34-like	family
DUF3958	PF13125.6	gi|284162478|ref|YP_003401101.1|	-	3	8.1	17.5	13	6.1	0.2	5.4	5	1	0	5	5	5	0	Protein	of	unknown	function	(DUF3958)
POX	PF07526.11	gi|284162478|ref|YP_003401101.1|	-	3	8.4	8.7	0.47	11.0	2.9	2.4	2	0	0	2	2	2	0	Associated	with	HOX
DUF4041	PF13250.6	gi|284162478|ref|YP_003401101.1|	-	3.4	7.6	11.8	16	5.5	0.0	5.9	5	2	2	7	7	6	0	Domain	of	unknown	function	(DUF4041)
Allexi_40kDa	PF05549.11	gi|284162478|ref|YP_003401101.1|	-	3.6	7.0	13.9	5	6.5	4.5	3.5	3	0	0	3	3	3	0	Allexivirus	40kDa	protein
Vps51	PF08700.11	gi|284162478|ref|YP_003401101.1|	-	4.1	7.6	13.4	3.2	7.9	0.1	5.7	7	0	0	7	7	4	0	Vps51/Vps67
Rsd_AlgQ	PF04353.13	gi|284162478|ref|YP_003401101.1|	-	7.5	6.5	8.4	2.2	8.3	0.4	3.9	2	2	1	3	3	3	0	Regulator	of	RNA	polymerase	sigma(70)	subunit,	Rsd/AlgQ
CCAP	PF11105.8	gi|284162481|ref|YP_003401104.1|	-	0.00052	20.0	0.5	0.0012	18.8	0.1	1.8	1	1	1	2	2	2	1	Arthropod	cardioacceleratory	peptide	2a
DUF1380	PF07128.12	gi|284162481|ref|YP_003401104.1|	-	0.019	15.2	0.2	0.037	14.2	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1380)
Mit_KHE1	PF10173.9	gi|284162481|ref|YP_003401104.1|	-	0.12	12.5	1.4	0.18	11.9	1.4	1.2	1	0	0	1	1	1	0	Mitochondrial	K+-H+	exchange-related
SseC	PF04888.12	gi|284162481|ref|YP_003401104.1|	-	0.16	11.5	4.0	0.34	10.4	0.3	2.1	2	0	0	2	2	2	0	Secretion	system	effector	C	(SseC)	like	family
DUF4352	PF11611.8	gi|284162482|ref|YP_003401105.1|	-	1.2e-16	61.1	1.3	1.8e-16	60.5	1.3	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4352)
DUF5067	PF16729.5	gi|284162482|ref|YP_003401105.1|	-	5.2e-07	29.6	0.5	9.6e-07	28.8	0.5	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF5067)
DUF4354	PF14263.6	gi|284162482|ref|YP_003401105.1|	-	0.015	15.1	1.3	0.018	14.9	0.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4354)
DUF4179	PF13786.6	gi|284162482|ref|YP_003401105.1|	-	0.081	13.4	0.6	0.18	12.3	0.2	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4179)
T2SSF	PF00482.23	gi|284162483|ref|YP_003401106.1|	-	8.6e-19	67.7	5.6	7.6e-09	35.6	0.0	3.0	3	0	0	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
Claudin_2	PF13903.6	gi|284162483|ref|YP_003401106.1|	-	0.065	13.0	0.3	0.065	13.0	0.3	3.1	3	1	1	4	4	4	0	PMP-22/EMP/MP20/Claudin	tight	junction
Utp13	PF08625.11	gi|284162483|ref|YP_003401106.1|	-	0.091	12.7	0.3	0.22	11.4	0.3	1.6	1	0	0	1	1	1	0	Utp13	specific	WD40	associated	domain
T2SSE	PF00437.20	gi|284162484|ref|YP_003401107.1|	-	2.1e-43	148.3	0.0	4e-43	147.5	0.0	1.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.27	gi|284162484|ref|YP_003401107.1|	-	0.00049	20.6	0.0	0.0012	19.3	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.6	gi|284162484|ref|YP_003401107.1|	-	0.00054	19.6	0.0	0.0014	18.4	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|284162484|ref|YP_003401107.1|	-	0.0056	16.4	0.5	0.14	11.9	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284162484|ref|YP_003401107.1|	-	0.0074	16.8	0.9	0.0074	16.8	0.9	2.5	2	1	1	3	3	3	1	AAA	domain
MMR_HSR1	PF01926.23	gi|284162484|ref|YP_003401107.1|	-	0.044	13.9	0.2	0.25	11.4	0.0	2.2	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_22	PF13401.6	gi|284162484|ref|YP_003401107.1|	-	0.066	13.5	0.0	0.16	12.2	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|284162484|ref|YP_003401107.1|	-	0.082	12.4	0.0	5.7	6.4	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
ATPase	PF06745.13	gi|284162485|ref|YP_003401108.1|	-	2.2e-30	105.7	0.0	2.6e-30	105.5	0.0	1.1	1	0	0	1	1	1	1	KaiC
PAXNEB	PF05625.11	gi|284162485|ref|YP_003401108.1|	-	4.6e-14	52.3	1.7	1.7e-10	40.6	0.1	2.1	2	0	0	2	2	2	2	PAXNEB	protein
Rad51	PF08423.11	gi|284162485|ref|YP_003401108.1|	-	1.3e-10	41.0	0.3	3.2e-10	39.7	0.3	1.6	1	1	0	1	1	1	1	Rad51
DUF835	PF05763.12	gi|284162485|ref|YP_003401108.1|	-	1.8e-06	27.7	0.1	3.1e-06	26.9	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
AAA_22	PF13401.6	gi|284162485|ref|YP_003401108.1|	-	1.1e-05	25.7	0.0	1.7e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|284162485|ref|YP_003401108.1|	-	1.5e-05	24.7	0.0	4.5e-05	23.1	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|284162485|ref|YP_003401108.1|	-	0.00013	21.5	0.2	0.00099	18.6	0.2	2.0	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
MEDS	PF14417.6	gi|284162485|ref|YP_003401108.1|	-	0.0021	17.9	0.0	0.0031	17.4	0.0	1.2	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
Elong_Iki1	PF10483.9	gi|284162485|ref|YP_003401108.1|	-	0.003	17.1	0.0	0.0042	16.6	0.0	1.2	1	0	0	1	1	1	1	Elongator	subunit	Iki1
AAA_14	PF13173.6	gi|284162485|ref|YP_003401108.1|	-	0.0063	16.5	0.5	0.098	12.7	0.4	2.4	1	1	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|284162485|ref|YP_003401108.1|	-	0.0086	15.5	0.0	0.015	14.7	0.0	1.4	1	1	0	1	1	1	1	Bacterial	TniB	protein
IstB_IS21	PF01695.17	gi|284162485|ref|YP_003401108.1|	-	0.1	12.3	0.1	0.63	9.8	0.0	1.9	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
SUD-M	PF11633.8	gi|284162485|ref|YP_003401108.1|	-	0.16	11.7	0.0	1.5	8.5	0.0	2.0	2	0	0	2	2	2	0	Single-stranded	poly(A)	binding	domain
Arch_flagellin	PF01917.16	gi|284162486|ref|YP_003401109.1|	-	2.2e-08	34.4	0.9	2.6e-08	34.3	0.9	1.1	1	0	0	1	1	1	1	Archaebacterial	flagellin
MKT1_N	PF12247.8	gi|284162486|ref|YP_003401109.1|	-	0.13	12.6	0.0	0.25	11.7	0.0	1.5	1	0	0	1	1	1	0	Temperature	dependent	protein	affecting	M2	dsRNA	replication
Arch_flagellin	PF01917.16	gi|284162487|ref|YP_003401110.1|	-	2.3e-10	40.9	1.9	3e-10	40.5	1.9	1.1	1	0	0	1	1	1	1	Archaebacterial	flagellin
CLZ	PF16526.5	gi|284162488|ref|YP_003401111.1|	-	0.0018	18.6	0.6	0.0018	18.6	0.6	2.7	2	0	0	2	2	2	1	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
Arch_fla_DE	PF04659.13	gi|284162488|ref|YP_003401111.1|	-	0.0061	16.4	0.0	0.015	15.1	0.0	1.7	1	0	0	1	1	1	1	Archaeal	flagella	protein
Uds1	PF15456.6	gi|284162488|ref|YP_003401111.1|	-	0.0097	16.1	1.5	0.015	15.5	1.5	1.3	1	0	0	1	1	1	1	Up-regulated	During	Septation
Mito_fiss_reg	PF05308.11	gi|284162488|ref|YP_003401111.1|	-	0.015	15.4	10.4	0.02	15.0	10.4	1.1	1	0	0	1	1	1	0	Mitochondrial	fission	regulator
DUF1048	PF06304.11	gi|284162488|ref|YP_003401111.1|	-	0.018	15.4	0.1	0.44	11.0	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1048)
Baculo_PEP_C	PF04513.12	gi|284162488|ref|YP_003401111.1|	-	0.044	13.8	0.4	0.28	11.2	0.3	2.0	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
YtxH	PF12732.7	gi|284162488|ref|YP_003401111.1|	-	0.049	14.2	0.0	0.25	11.9	0.0	2.1	1	1	1	2	2	2	0	YtxH-like	protein
Exonuc_VII_L	PF02601.15	gi|284162488|ref|YP_003401111.1|	-	0.062	12.9	0.5	0.073	12.6	0.5	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF948	PF06103.11	gi|284162488|ref|YP_003401111.1|	-	0.091	13.0	0.3	0.091	13.0	0.3	2.6	3	1	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF4034	PF13226.6	gi|284162488|ref|YP_003401111.1|	-	0.095	12.0	0.1	0.16	11.3	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4034)
DUF1631	PF07793.11	gi|284162488|ref|YP_003401111.1|	-	0.11	11.0	6.6	0.14	10.5	6.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1631)
AATF-Che1	PF13339.6	gi|284162488|ref|YP_003401111.1|	-	0.21	12.3	3.7	0.45	11.2	3.7	1.5	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
SKA1	PF07160.12	gi|284162488|ref|YP_003401111.1|	-	0.33	10.7	11.5	0.52	10.1	11.5	1.2	1	0	0	1	1	1	0	Spindle	and	kinetochore-associated	protein	1
GrpE	PF01025.19	gi|284162488|ref|YP_003401111.1|	-	0.48	10.1	12.3	0.71	9.5	0.4	2.5	2	0	0	2	2	2	0	GrpE
BAR_3	PF16746.5	gi|284162488|ref|YP_003401111.1|	-	0.54	9.9	6.9	5.9	6.5	6.3	2.2	1	1	1	2	2	2	0	BAR	domain	of	APPL	family
ALMT	PF11744.8	gi|284162488|ref|YP_003401111.1|	-	0.65	8.8	3.9	0.83	8.4	3.9	1.1	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
TT_ORF2	PF02957.15	gi|284162488|ref|YP_003401111.1|	-	0.82	10.6	4.6	0.22	12.5	1.0	1.7	2	0	0	2	2	2	0	TT	viral	ORF2
ACCA	PF03255.14	gi|284162488|ref|YP_003401111.1|	-	0.88	9.4	4.6	1.5	8.7	0.1	2.3	2	0	0	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Astro_capsid_p	PF12226.8	gi|284162488|ref|YP_003401111.1|	-	1.9	7.6	5.9	2.5	7.2	5.9	1.1	1	0	0	1	1	1	0	Turkey	astrovirus	capsid	protein
Terpene_synth	PF01397.21	gi|284162488|ref|YP_003401111.1|	-	2.3	7.8	5.7	9.8	5.8	0.1	2.6	3	0	0	3	3	3	0	Terpene	synthase,	N-terminal	domain
Goodbye	PF17109.5	gi|284162488|ref|YP_003401111.1|	-	3.3	8.2	6.4	27	5.3	0.2	2.5	2	0	0	2	2	2	0	fungal	STAND	N-terminal	Goodbye	domain
Usp	PF00582.26	gi|284162488|ref|YP_003401111.1|	-	4.4	7.8	6.5	7.6	7.0	4.7	2.1	3	0	0	3	3	3	0	Universal	stress	protein	family
DUF740	PF05340.12	gi|284162488|ref|YP_003401111.1|	-	6.4	5.4	6.4	8.5	5.0	6.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF740)
Pox_Ag35	PF03286.14	gi|284162488|ref|YP_003401111.1|	-	7.4	6.3	12.2	14	5.4	12.2	1.6	1	0	0	1	1	1	0	Pox	virus	Ag35	surface	protein
AAA_23	PF13476.6	gi|284162488|ref|YP_003401111.1|	-	9.3	6.7	11.7	18	5.7	11.2	1.6	1	1	0	1	1	1	0	AAA	domain
Arch_flagellin	PF01917.16	gi|284162489|ref|YP_003401112.1|	-	2.3e-39	135.2	0.2	2.6e-39	135.0	0.2	1.0	1	0	0	1	1	1	1	Archaebacterial	flagellin
PMP22_Claudin	PF00822.20	gi|284162489|ref|YP_003401112.1|	-	0.16	11.8	1.5	0.24	11.2	1.5	1.2	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	family
Arch_flagellin	PF01917.16	gi|284162490|ref|YP_003401113.1|	-	1.6e-39	135.7	0.2	1.9e-39	135.5	0.2	1.0	1	0	0	1	1	1	1	Archaebacterial	flagellin
DUF2427	PF10348.9	gi|284162491|ref|YP_003401114.1|	-	0.066	13.0	4.4	0.092	12.5	2.5	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2427)
IBP39	PF11422.8	gi|284162491|ref|YP_003401114.1|	-	0.16	11.7	0.1	0.2	11.4	0.1	1.1	1	0	0	1	1	1	0	Initiator	binding	protein	39	kDa
ATP_bind_3	PF01171.20	gi|284162492|ref|YP_003401115.1|	-	3.4e-13	49.7	0.0	1.4e-12	47.7	0.0	1.9	2	1	0	2	2	2	1	PP-loop	family
zn-ribbon_14	PF16503.5	gi|284162492|ref|YP_003401115.1|	-	2.1e-10	39.9	1.9	2.1e-10	39.9	1.9	2.2	3	0	0	3	3	3	1	Zinc-ribbon
Asn_synthase	PF00733.21	gi|284162492|ref|YP_003401115.1|	-	8.2e-07	29.0	0.0	1.2e-06	28.5	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.16	gi|284162492|ref|YP_003401115.1|	-	2e-06	26.9	0.0	2.6e-06	26.5	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyl	transferase
PAPS_reduct	PF01507.19	gi|284162492|ref|YP_003401115.1|	-	0.0018	18.3	0.0	0.0032	17.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
QueC	PF06508.13	gi|284162492|ref|YP_003401115.1|	-	0.021	14.3	0.1	0.079	12.5	0.0	2.0	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
RecR	PF02132.15	gi|284162492|ref|YP_003401115.1|	-	0.62	9.7	5.4	1.2	8.8	2.9	2.5	2	0	0	2	2	2	0	RecR	protein
DZR	PF12773.7	gi|284162492|ref|YP_003401115.1|	-	7.1	6.7	8.5	2.5	8.2	0.8	3.1	3	0	0	3	3	3	0	Double	zinc	ribbon
DUF521	PF04412.13	gi|284162494|ref|YP_003401117.1|	-	3.3e-142	473.9	0.0	3.9e-142	473.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
HP0268	PF18618.1	gi|284162494|ref|YP_003401117.1|	-	0.15	12.5	0.0	11	6.6	0.0	2.7	3	0	0	3	3	3	0	HP0268
DUF5371	PF17341.2	gi|284162495|ref|YP_003401118.1|	-	8.6e-10	38.7	0.1	9.5e-10	38.5	0.1	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5371)
CxxCxxCC	PF03692.15	gi|284162496|ref|YP_003401119.1|	-	5.3e-11	43.1	1.5	7.4e-11	42.6	1.5	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
DUF3109	PF11307.8	gi|284162496|ref|YP_003401119.1|	-	0.022	14.6	0.2	0.022	14.6	0.2	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3109)
DNase-RNase	PF02577.14	gi|284162497|ref|YP_003401120.1|	-	1e-45	154.6	0.1	1.1e-45	154.4	0.1	1.0	1	0	0	1	1	1	1	Bifunctional	nuclease
HcyBio	PF01837.16	gi|284162498|ref|YP_003401121.1|	-	3.5e-144	479.9	0.0	4.7e-144	479.5	0.0	1.2	1	0	0	1	1	1	1	Homocysteine	biosynthesis	enzyme,	sulfur-incorporation
CBS	PF00571.28	gi|284162498|ref|YP_003401121.1|	-	3.9e-33	113.7	8.5	2.2e-17	63.2	0.4	3.3	3	0	0	3	3	3	2	CBS	domain
Fer4	PF00037.27	gi|284162499|ref|YP_003401122.1|	-	5.7e-14	51.2	12.3	1.6e-07	30.8	2.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162499|ref|YP_003401122.1|	-	4.1e-13	49.7	20.8	6.7e-10	39.4	10.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162499|ref|YP_003401122.1|	-	1.9e-11	43.5	15.4	2.5e-06	27.3	2.5	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162499|ref|YP_003401122.1|	-	5.5e-11	41.9	11.0	3.9e-05	23.5	1.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284162499|ref|YP_003401122.1|	-	2.9e-10	40.1	18.0	1.1e-07	31.9	9.3	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284162499|ref|YP_003401122.1|	-	2.9e-09	36.9	12.4	7.4e-08	32.4	12.4	2.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
NIL	PF09383.10	gi|284162499|ref|YP_003401122.1|	-	7.4e-08	32.1	0.1	9.2e-08	31.8	0.1	1.1	1	0	0	1	1	1	1	NIL	domain
Fer4_4	PF12800.7	gi|284162499|ref|YP_003401122.1|	-	2.8e-07	30.5	13.3	0.00039	20.7	2.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162499|ref|YP_003401122.1|	-	3.8e-07	30.1	12.9	0.0021	18.2	3.1	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162499|ref|YP_003401122.1|	-	4.6e-07	30.3	5.4	0.0018	18.8	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162499|ref|YP_003401122.1|	-	1.1e-06	29.5	8.0	0.0015	19.5	0.4	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|284162499|ref|YP_003401122.1|	-	4.4e-06	27.1	7.4	0.0056	17.1	0.6	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284162499|ref|YP_003401122.1|	-	1.9e-05	25.1	9.6	0.00063	20.2	1.1	2.4	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|284162499|ref|YP_003401122.1|	-	6.4e-05	23.6	18.6	0.014	16.3	5.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|284162499|ref|YP_003401122.1|	-	0.00026	21.2	12.4	0.013	15.7	11.8	2.2	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284162499|ref|YP_003401122.1|	-	0.0036	18.0	13.5	0.089	13.5	1.5	3.0	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
AIRS_C	PF02769.22	gi|284162499|ref|YP_003401122.1|	-	0.058	13.5	0.1	0.063	13.4	0.1	1.1	1	0	0	1	1	1	0	AIR	synthase	related	protein,	C-terminal	domain
Tricorn_PDZ	PF14685.6	gi|284162499|ref|YP_003401122.1|	-	0.091	12.7	0.2	0.19	11.7	0.1	1.4	1	1	0	1	1	1	0	Tricorn	protease	PDZ	domain
Fer4_22	PF17179.4	gi|284162499|ref|YP_003401122.1|	-	0.21	12.4	13.1	0.75	10.7	2.3	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|284162499|ref|YP_003401122.1|	-	0.81	9.9	7.3	0.96	9.6	1.8	2.2	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_19	PF06902.11	gi|284162499|ref|YP_003401122.1|	-	1.7	8.8	13.6	0.53	10.4	1.6	2.8	2	1	1	3	3	3	0	Divergent	4Fe-4S	mono-cluster
zf-C2H2_11	PF16622.5	gi|284162499|ref|YP_003401122.1|	-	4.5	7.1	12.5	2.5	7.9	2.6	2.3	2	0	0	2	2	2	0	zinc-finger	C2H2-type
EamA	PF00892.20	gi|284162500|ref|YP_003401123.1|	-	7e-33	113.7	44.1	1.3e-24	86.9	16.5	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
Rad51	PF08423.11	gi|284162501|ref|YP_003401124.1|	-	1.4e-85	286.7	1.0	2.7e-70	236.5	0.0	2.2	2	0	0	2	2	2	2	Rad51
Intein_splicing	PF14890.6	gi|284162501|ref|YP_003401124.1|	-	5.5e-23	81.4	0.0	2.7e-22	79.1	0.0	2.2	2	1	0	2	2	2	1	Intein	splicing	domain
LAGLIDADG_3	PF14528.6	gi|284162501|ref|YP_003401124.1|	-	8.4e-12	45.2	0.4	4.8e-08	33.2	0.1	2.6	2	0	0	2	2	2	2	LAGLIDADG-like	domain
HHH_5	PF14520.6	gi|284162501|ref|YP_003401124.1|	-	4.4e-11	43.2	1.7	1.5e-10	41.5	1.7	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
Hom_end	PF05204.14	gi|284162501|ref|YP_003401124.1|	-	5.5e-07	29.7	0.4	0.00018	21.6	0.1	3.5	3	1	1	4	4	4	1	Homing	endonuclease
HHH_2	PF12826.7	gi|284162501|ref|YP_003401124.1|	-	3.9e-05	23.6	0.1	0.00013	22.0	0.1	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Cdd1	PF11731.8	gi|284162501|ref|YP_003401124.1|	-	0.00017	21.8	0.0	0.00049	20.3	0.0	1.8	1	0	0	1	1	1	1	Pathogenicity	locus
RecA	PF00154.21	gi|284162501|ref|YP_003401124.1|	-	0.00017	21.2	2.2	0.11	12.0	0.0	2.7	3	0	0	3	3	3	2	recA	bacterial	DNA	recombination	protein
HHH	PF00633.23	gi|284162501|ref|YP_003401124.1|	-	0.00017	21.3	3.4	0.33	10.9	0.1	2.9	3	0	0	3	3	3	2	Helix-hairpin-helix	motif
LAGLIDADG_WhiA	PF14527.6	gi|284162501|ref|YP_003401124.1|	-	0.00058	19.9	0.0	1.9	8.6	0.0	3.6	3	0	0	3	3	3	2	WhiA	LAGLIDADG-like	domain
CPSase_L_D3	PF02787.19	gi|284162501|ref|YP_003401124.1|	-	0.0016	18.8	0.1	0.005	17.2	0.1	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
ATPase	PF06745.13	gi|284162501|ref|YP_003401124.1|	-	0.0025	17.2	0.2	1.3	8.3	0.1	2.5	2	0	0	2	2	2	2	KaiC
HHH_8	PF14716.6	gi|284162501|ref|YP_003401124.1|	-	0.01	16.2	0.7	0.8	10.1	0.0	3.0	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.9	gi|284162501|ref|YP_003401124.1|	-	0.022	14.6	0.0	0.071	13.0	0.0	1.9	1	0	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
IMS_HHH	PF11798.8	gi|284162501|ref|YP_003401124.1|	-	0.05	14.0	0.0	0.19	12.1	0.0	2.1	1	0	0	1	1	1	0	IMS	family	HHH	motif
DUF3791	PF12668.7	gi|284162501|ref|YP_003401124.1|	-	1.8	8.7	4.1	65	3.7	0.0	3.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3791)
AAA	PF00004.29	gi|284162502|ref|YP_003401125.1|	-	7.7e-39	133.1	0.1	1.9e-38	131.9	0.0	1.7	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|284162502|ref|YP_003401125.1|	-	1.9e-13	49.9	0.1	6.8e-13	48.2	0.1	2.0	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_5	PF07728.14	gi|284162502|ref|YP_003401125.1|	-	3.9e-07	30.1	0.0	2.2e-06	27.7	0.0	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.6	gi|284162502|ref|YP_003401125.1|	-	3.9e-06	27.5	0.0	1.7e-05	25.4	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
AAA_33	PF13671.6	gi|284162502|ref|YP_003401125.1|	-	2.8e-05	24.3	0.0	7.3e-05	23.0	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|284162502|ref|YP_003401125.1|	-	3.7e-05	24.0	0.0	7.8e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|284162502|ref|YP_003401125.1|	-	8.4e-05	22.9	0.4	0.0095	16.2	0.1	2.8	1	1	1	2	2	2	1	AAA	domain
RuvB_N	PF05496.12	gi|284162502|ref|YP_003401125.1|	-	0.00039	20.2	0.0	0.0011	18.8	0.0	1.9	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_2	PF07724.14	gi|284162502|ref|YP_003401125.1|	-	0.00056	20.1	0.1	0.012	15.7	0.0	2.7	2	1	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.6	gi|284162502|ref|YP_003401125.1|	-	0.00098	19.5	0.2	0.039	14.3	0.1	2.6	1	1	0	2	2	2	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|284162502|ref|YP_003401125.1|	-	0.003	17.5	0.0	0.0063	16.5	0.0	1.6	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_17	PF13207.6	gi|284162502|ref|YP_003401125.1|	-	0.0031	18.0	1.2	0.006	17.0	0.1	2.3	2	1	0	2	2	1	1	AAA	domain
AAA_11	PF13086.6	gi|284162502|ref|YP_003401125.1|	-	0.0038	17.1	0.1	0.023	14.5	0.1	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|284162502|ref|YP_003401125.1|	-	0.0043	16.6	0.0	0.011	15.3	0.0	1.6	1	1	0	1	1	1	1	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|284162502|ref|YP_003401125.1|	-	0.0084	15.5	0.0	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Cytidylate_kin2	PF13189.6	gi|284162502|ref|YP_003401125.1|	-	0.011	15.8	0.0	0.052	13.7	0.0	2.1	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
NACHT	PF05729.12	gi|284162502|ref|YP_003401125.1|	-	0.021	14.8	0.1	5.5	6.9	0.0	2.3	1	1	0	2	2	2	0	NACHT	domain
AAA_14	PF13173.6	gi|284162502|ref|YP_003401125.1|	-	0.021	14.9	0.0	0.077	13.0	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|284162502|ref|YP_003401125.1|	-	0.023	14.4	0.0	0.052	13.3	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
TIP49	PF06068.13	gi|284162502|ref|YP_003401125.1|	-	0.023	13.9	0.0	0.052	12.7	0.0	1.6	1	1	0	1	1	1	0	TIP49	P-loop	domain
MMR_HSR1	PF01926.23	gi|284162502|ref|YP_003401125.1|	-	0.026	14.6	0.0	0.068	13.3	0.0	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.27	gi|284162502|ref|YP_003401125.1|	-	0.028	14.9	0.0	0.078	13.5	0.0	1.8	1	0	0	1	1	1	0	ABC	transporter
SKI	PF01202.22	gi|284162502|ref|YP_003401125.1|	-	0.031	14.4	0.0	0.071	13.2	0.0	1.6	1	0	0	1	1	1	0	Shikimate	kinase
AAA_24	PF13479.6	gi|284162502|ref|YP_003401125.1|	-	0.033	13.9	0.2	0.069	12.9	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|284162502|ref|YP_003401125.1|	-	0.037	13.8	0.2	0.2	11.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|284162502|ref|YP_003401125.1|	-	0.047	14.1	0.1	0.12	12.8	0.0	1.9	2	1	0	2	2	1	0	RNA	helicase
AAA_6	PF12774.7	gi|284162502|ref|YP_003401125.1|	-	0.058	12.4	0.1	0.1	11.6	0.1	1.6	1	1	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
ADK	PF00406.22	gi|284162502|ref|YP_003401125.1|	-	0.066	13.3	0.9	2.9	8.0	0.1	2.8	2	1	0	2	2	2	0	Adenylate	kinase
ResIII	PF04851.15	gi|284162502|ref|YP_003401125.1|	-	0.087	12.8	0.1	0.36	10.8	0.0	2.0	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|284162502|ref|YP_003401125.1|	-	0.095	13.0	0.9	0.45	10.8	0.9	2.1	1	1	0	1	1	1	0	AAA	domain
TsaE	PF02367.17	gi|284162502|ref|YP_003401125.1|	-	0.12	12.4	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Guanylate_kin	PF00625.21	gi|284162502|ref|YP_003401125.1|	-	0.73	9.5	0.0	0.73	9.5	0.0	2.8	4	0	0	4	4	3	0	Guanylate	kinase
MG2	PF01835.19	gi|284162503|ref|YP_003401126.1|	-	0.0094	16.4	0.0	3.1	8.3	0.0	2.4	1	1	0	2	2	2	2	MG2	domain
CARDB	PF07705.11	gi|284162503|ref|YP_003401126.1|	-	0.016	15.5	0.0	0.031	14.5	0.0	1.4	1	0	0	1	1	1	0	CARDB
Y_Y_Y	PF07495.13	gi|284162503|ref|YP_003401126.1|	-	0.026	14.5	0.3	1.1	9.2	0.0	2.8	2	0	0	2	2	2	0	Y_Y_Y	domain
DUF5067	PF16729.5	gi|284162503|ref|YP_003401126.1|	-	0.064	13.2	1.8	19	5.2	0.0	3.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5067)
DUF2842	PF11003.8	gi|284162504|ref|YP_003401127.1|	-	0.74	10.1	6.9	0.99	9.7	6.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2842)
MR_MLE_C	PF13378.6	gi|284162505|ref|YP_003401128.1|	-	1.8e-46	158.5	0.0	2.5e-46	158.0	0.0	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|284162505|ref|YP_003401128.1|	-	5.3e-11	42.8	0.0	8.4e-11	42.1	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MAAL_C	PF07476.11	gi|284162505|ref|YP_003401128.1|	-	0.00028	20.1	0.1	0.00047	19.4	0.1	1.3	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
Enolase_C	PF00113.22	gi|284162505|ref|YP_003401128.1|	-	0.017	14.4	0.1	0.023	13.9	0.1	1.2	1	0	0	1	1	1	0	Enolase,	C-terminal	TIM	barrel	domain
MAAL_N	PF05034.13	gi|284162505|ref|YP_003401128.1|	-	0.051	13.2	0.0	0.13	11.8	0.0	1.6	2	0	0	2	2	2	0	Methylaspartate	ammonia-lyase	N-terminus
Asp_Glu_race	PF01177.22	gi|284162506|ref|YP_003401129.1|	-	1.3e-12	48.1	0.1	1.6e-12	47.8	0.1	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
DUF2112	PF09885.9	gi|284162506|ref|YP_003401129.1|	-	0.0019	18.3	1.0	0.65	10.0	0.1	2.9	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2112)
PA	PF02225.22	gi|284162506|ref|YP_003401129.1|	-	0.14	12.2	0.0	0.24	11.4	0.0	1.5	1	0	0	1	1	1	0	PA	domain
Asparaginase_C	PF17763.1	gi|284162506|ref|YP_003401129.1|	-	0.17	12.1	0.2	18	5.6	0.1	2.4	2	0	0	2	2	2	0	Glutaminase/Asparaginase	C-terminal	domain
Transp_cyt_pur	PF02133.15	gi|284162507|ref|YP_003401130.1|	-	4.3e-42	144.4	42.5	5.2e-42	144.1	42.5	1.1	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
DUF5353	PF17304.2	gi|284162507|ref|YP_003401130.1|	-	6.3	6.6	10.0	2.1	8.1	1.4	3.7	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5353)
Hydant_A_N	PF05378.13	gi|284162508|ref|YP_003401131.1|	-	4.5e-47	160.0	8.7	7e-46	156.2	1.7	2.8	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase	N-terminal	region
Hydantoinase_A	PF01968.18	gi|284162508|ref|YP_003401131.1|	-	1.2e-37	129.8	12.6	2.7e-34	118.8	3.0	3.5	2	2	2	4	4	4	2	Hydantoinase/oxoprolinase
BcrAD_BadFG	PF01869.20	gi|284162508|ref|YP_003401131.1|	-	4.9e-09	36.1	9.4	3.2e-08	33.4	0.9	3.1	2	1	0	3	3	3	2	BadF/BadG/BcrA/BcrD	ATPase	family
MutL	PF13941.6	gi|284162508|ref|YP_003401131.1|	-	6.4e-09	34.9	2.7	0.0011	17.6	0.1	2.5	2	0	0	2	2	2	2	MutL	protein
StbA	PF06406.11	gi|284162508|ref|YP_003401131.1|	-	0.00022	20.6	0.4	0.32	10.2	0.0	2.8	3	0	0	3	3	3	2	StbA	protein
ROK	PF00480.20	gi|284162508|ref|YP_003401131.1|	-	0.0014	18.2	0.4	0.0014	18.2	0.4	2.6	3	0	0	3	3	3	1	ROK	family
FGGY_N	PF00370.21	gi|284162508|ref|YP_003401131.1|	-	0.0057	16.2	0.3	0.12	11.9	0.2	2.5	2	1	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
DEDD_Tnp_IS110	PF01548.17	gi|284162508|ref|YP_003401131.1|	-	0.01	15.7	0.1	0.022	14.6	0.1	1.6	1	0	0	1	1	1	0	Transposase
bacHORMA_2	PF18173.1	gi|284162508|ref|YP_003401131.1|	-	0.13	12.1	0.1	0.28	11.0	0.1	1.5	2	0	0	2	2	2	0	Bacterial	HORMA	domain	2
FtsA	PF14450.6	gi|284162508|ref|YP_003401131.1|	-	1	9.8	18.7	20	5.7	3.4	4.7	2	2	0	2	2	2	0	Cell	division	protein	FtsA
DUF2759	PF10958.8	gi|284162510|ref|YP_003401133.1|	-	0.0036	17.0	2.1	0.0036	17.0	2.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2759)
CarboxypepD_reg	PF13620.6	gi|284162510|ref|YP_003401133.1|	-	0.12	12.7	0.0	0.16	12.2	0.0	1.2	1	0	0	1	1	1	0	Carboxypeptidase	regulatory-like	domain
HemY_N	PF07219.13	gi|284162510|ref|YP_003401133.1|	-	0.74	10.0	4.6	1.8	8.8	0.0	2.2	2	0	0	2	2	2	0	HemY	protein	N-terminus
Phage_holin_3_6	PF07332.11	gi|284162510|ref|YP_003401133.1|	-	5.3	7.1	9.0	3.5	7.7	1.0	2.3	2	0	0	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Radical_SAM	PF04055.21	gi|284162511|ref|YP_003401134.1|	-	6.9e-20	72.1	0.1	1.6e-19	70.9	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
IF2_N	PF04760.15	gi|284162511|ref|YP_003401134.1|	-	0.055	13.3	0.1	1.8	8.5	0.1	2.7	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
zf-ZPR1	PF03367.13	gi|284162512|ref|YP_003401135.1|	-	9.2e-35	119.8	0.0	1.2e-34	119.5	0.0	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
SepF	PF04472.12	gi|284162513|ref|YP_003401136.1|	-	1.3e-14	54.2	0.6	2.1e-14	53.5	0.6	1.3	1	0	0	1	1	1	1	Cell	division	protein	SepF
DUF1233	PF06806.12	gi|284162513|ref|YP_003401136.1|	-	0.026	14.1	0.1	0.72	9.5	0.0	2.7	2	1	0	2	2	2	0	Putative	excisionase	(DUF1233)
Flavoprotein	PF02441.19	gi|284162514|ref|YP_003401137.1|	-	4.6e-25	88.2	0.0	5.8e-25	87.9	0.0	1.1	1	0	0	1	1	1	1	Flavoprotein
DUF4363	PF14276.6	gi|284162515|ref|YP_003401138.1|	-	1.5e-06	28.3	11.9	0.021	14.9	2.4	3.5	2	1	1	3	3	3	2	Domain	of	unknown	function	(DUF4363)
EzrA	PF06160.12	gi|284162515|ref|YP_003401138.1|	-	0.00017	19.9	15.5	0.0025	16.0	0.1	4.0	3	1	2	5	5	5	3	Septation	ring	formation	regulator,	EzrA
TRPM_tetra	PF16519.5	gi|284162515|ref|YP_003401138.1|	-	0.021	14.9	1.4	2	8.6	0.2	2.6	2	0	0	2	2	2	0	Tetramerisation	domain	of	TRPM
Jacalin	PF01419.17	gi|284162515|ref|YP_003401138.1|	-	0.034	14.1	2.7	0.54	10.2	0.0	3.1	1	1	1	3	3	3	0	Jacalin-like	lectin	domain
Takusan	PF04822.13	gi|284162515|ref|YP_003401138.1|	-	0.076	12.9	0.1	17	5.4	0.0	2.5	2	0	0	2	2	2	0	Takusan
Baculo_PEP_C	PF04513.12	gi|284162515|ref|YP_003401138.1|	-	0.094	12.8	4.4	0.058	13.4	0.7	2.2	2	1	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
YfdX	PF10938.8	gi|284162515|ref|YP_003401138.1|	-	0.17	11.8	2.1	13	5.7	0.2	2.5	1	1	1	2	2	2	0	YfdX	protein
PsbX	PF06596.11	gi|284162515|ref|YP_003401138.1|	-	1.8	8.7	5.5	4	7.5	5.5	1.6	1	0	0	1	1	1	0	Photosystem	II	reaction	centre	X	protein	(PsbX)
BLOC1_2	PF10046.9	gi|284162515|ref|YP_003401138.1|	-	1.8	8.9	10.8	9.2	6.7	0.2	3.5	2	2	1	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Laminin_II	PF06009.12	gi|284162515|ref|YP_003401138.1|	-	2.8	8.0	5.9	8.8	6.3	0.1	3.0	3	1	1	4	4	4	0	Laminin	Domain	II
Tubulin	PF00091.25	gi|284162516|ref|YP_003401139.1|	-	2.1e-25	90.1	0.0	3.6e-25	89.3	0.0	1.3	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
Tubulin_2	PF13809.6	gi|284162516|ref|YP_003401139.1|	-	0.0058	15.9	0.0	0.01	15.0	0.0	1.4	1	0	0	1	1	1	1	Tubulin	like
DUF498	PF04430.14	gi|284162517|ref|YP_003401140.1|	-	4.5e-27	94.3	0.0	5e-27	94.1	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF498/DUF598)
Peripla_BP_2	PF01497.18	gi|284162517|ref|YP_003401140.1|	-	0.0025	17.4	0.0	0.0029	17.2	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
Phage_C	PF12025.8	gi|284162517|ref|YP_003401140.1|	-	0.058	13.3	0.1	0.092	12.6	0.1	1.3	1	0	0	1	1	1	0	Phage	protein	C
Flavoprotein	PF02441.19	gi|284162517|ref|YP_003401140.1|	-	0.12	12.2	0.0	0.16	11.7	0.0	1.3	1	0	0	1	1	1	0	Flavoprotein
Cpn60_TCP1	PF00118.24	gi|284162518|ref|YP_003401141.1|	-	7.1e-189	628.5	20.4	8.1e-189	628.3	20.4	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TPR_20	PF14561.6	gi|284162518|ref|YP_003401141.1|	-	0.27	11.6	2.3	1.4	9.3	0.0	2.8	3	0	0	3	3	3	0	Tetratricopeptide	repeat
HK97-gp10_like	PF04883.12	gi|284162518|ref|YP_003401141.1|	-	0.39	11.7	6.9	12	6.9	0.8	4.5	3	1	0	3	3	3	0	Bacteriophage	HK97-gp10,	putative	tail-component
HTH_3	PF01381.22	gi|284162519|ref|YP_003401142.1|	-	2.4e-12	46.7	0.5	5.5e-12	45.6	0.5	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|284162519|ref|YP_003401142.1|	-	4.7e-09	36.1	0.3	2.1e-08	34.1	0.5	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|284162519|ref|YP_003401142.1|	-	8.7e-07	29.2	0.1	1.6e-06	28.4	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|284162519|ref|YP_003401142.1|	-	0.00022	21.1	0.1	0.0018	18.2	0.0	2.6	3	0	0	3	3	3	1	HTH	domain
MerR	PF00376.23	gi|284162519|ref|YP_003401142.1|	-	0.00072	19.3	0.0	0.0014	18.3	0.0	1.5	1	0	0	1	1	1	1	MerR	family	regulatory	protein
NUMOD1	PF07453.13	gi|284162519|ref|YP_003401142.1|	-	0.002	18.3	0.1	0.0087	16.3	0.0	2.1	2	0	0	2	2	2	1	NUMOD1	domain
Sigma70_r4_2	PF08281.12	gi|284162519|ref|YP_003401142.1|	-	0.0022	17.7	0.0	0.0053	16.4	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_25	PF13413.6	gi|284162519|ref|YP_003401142.1|	-	0.0025	17.7	0.4	0.0025	17.7	0.4	1.7	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|284162519|ref|YP_003401142.1|	-	0.0031	17.5	0.0	0.013	15.6	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
MerR_1	PF13411.6	gi|284162519|ref|YP_003401142.1|	-	0.0047	17.0	0.0	0.013	15.6	0.0	1.8	1	0	0	1	1	1	1	MerR	HTH	family	regulatory	protein
HTH_17	PF12728.7	gi|284162519|ref|YP_003401142.1|	-	0.0053	16.9	0.0	0.021	15.0	0.0	2.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_ECF	PF07638.11	gi|284162519|ref|YP_003401142.1|	-	0.01	15.7	0.0	0.024	14.5	0.0	1.6	1	0	0	1	1	1	0	ECF	sigma	factor
HTH_23	PF13384.6	gi|284162519|ref|YP_003401142.1|	-	0.01	15.6	0.0	0.033	14.0	0.0	1.9	1	0	0	1	1	1	0	Homeodomain-like	domain
Sigma70_r4	PF04545.16	gi|284162519|ref|YP_003401142.1|	-	0.046	13.2	0.1	0.1	12.1	0.1	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
MqsA_antitoxin	PF15731.5	gi|284162519|ref|YP_003401142.1|	-	0.068	13.3	0.0	0.16	12.1	0.0	1.6	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
HTH_24	PF13412.6	gi|284162519|ref|YP_003401142.1|	-	0.086	12.4	0.0	0.24	11.0	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.6	gi|284162519|ref|YP_003401142.1|	-	0.096	12.8	0.0	0.25	11.5	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_29	PF13551.6	gi|284162519|ref|YP_003401142.1|	-	0.1	12.6	0.0	0.23	11.5	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn	helix
Cas_Csn2	PF09711.10	gi|284162519|ref|YP_003401142.1|	-	0.15	11.7	3.6	0.15	11.7	0.2	2.2	1	1	2	3	3	3	0	CRISPR-associated	protein	(Cas_Csn2)
TctA	PF01970.16	gi|284162520|ref|YP_003401143.1|	-	1.7e-43	148.9	32.3	2.4e-43	148.4	32.3	1.2	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
MBOAT_2	PF13813.6	gi|284162520|ref|YP_003401143.1|	-	6	7.2	5.7	2.7	8.3	0.1	2.9	3	0	0	3	3	3	0	Membrane	bound	O-acyl	transferase	family
Thi4	PF01946.17	gi|284162521|ref|YP_003401144.1|	-	1.2e-77	260.4	1.1	1.4e-77	260.2	1.1	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.24	gi|284162521|ref|YP_003401144.1|	-	4e-09	36.5	2.3	4.2e-06	26.6	0.3	2.0	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|284162521|ref|YP_003401144.1|	-	4.6e-09	36.1	0.4	7.9e-09	35.4	0.4	1.3	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|284162521|ref|YP_003401144.1|	-	2.4e-08	34.1	0.2	5.9e-08	32.8	0.2	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|284162521|ref|YP_003401144.1|	-	1.4e-07	31.0	4.5	3e-06	26.6	0.1	2.9	1	1	1	3	3	3	1	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|284162521|ref|YP_003401144.1|	-	5.6e-07	29.1	0.2	8.8e-07	28.5	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|284162521|ref|YP_003401144.1|	-	2.4e-06	27.0	0.1	4.2e-06	26.2	0.0	1.5	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|284162521|ref|YP_003401144.1|	-	1e-05	24.5	0.5	3.1e-05	22.9	0.1	1.8	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.22	gi|284162521|ref|YP_003401144.1|	-	0.00035	19.8	0.1	0.00068	18.8	0.1	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|284162521|ref|YP_003401144.1|	-	0.0048	16.2	0.1	0.0089	15.3	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|284162521|ref|YP_003401144.1|	-	0.015	14.3	0.3	0.028	13.5	0.0	1.5	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Amino_oxidase	PF01593.24	gi|284162521|ref|YP_003401144.1|	-	0.026	13.8	0.0	0.064	12.5	0.0	1.6	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
Pyr_redox	PF00070.27	gi|284162521|ref|YP_003401144.1|	-	0.049	14.2	1.3	0.33	11.5	0.1	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|284162521|ref|YP_003401144.1|	-	0.1	12.6	0.2	0.26	11.3	0.2	1.6	1	0	0	1	1	1	0	FAD-NAD(P)-binding
DNA_binding_1	PF01035.20	gi|284162522|ref|YP_003401145.1|	-	2.5e-26	91.6	0.0	3.3e-26	91.2	0.0	1.2	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
AviRa	PF11599.8	gi|284162522|ref|YP_003401145.1|	-	0.16	11.4	0.0	0.2	11.1	0.0	1.1	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
CTP_transf_like	PF01467.26	gi|284162523|ref|YP_003401146.1|	-	1.4e-14	54.5	0.0	2.1e-14	53.9	0.0	1.5	1	1	0	1	1	1	1	Cytidylyltransferase-like
AP_endonuc_2	PF01261.24	gi|284162524|ref|YP_003401147.1|	-	4.4e-14	52.4	0.1	5.9e-14	52.0	0.1	1.2	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
GCHY-1	PF02649.14	gi|284162525|ref|YP_003401148.1|	-	5e-78	262.2	0.2	5.7e-78	262.0	0.2	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
FolB	PF02152.18	gi|284162525|ref|YP_003401148.1|	-	0.0042	17.6	1.1	0.03	14.9	0.2	2.6	2	1	0	2	2	2	1	Dihydroneopterin	aldolase
DUF1116	PF06545.11	gi|284162525|ref|YP_003401148.1|	-	0.038	13.4	0.0	0.07	12.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1116)
PLDc_2	PF13091.6	gi|284162526|ref|YP_003401149.1|	-	1.8e-13	50.5	1.2	3.1e-12	46.5	0.1	2.4	2	1	0	2	2	2	1	PLD-like	domain
PLDc	PF00614.22	gi|284162526|ref|YP_003401149.1|	-	3.5e-05	23.8	0.1	8.9e-05	22.5	0.1	1.7	1	0	0	1	1	1	1	Phospholipase	D	Active	site	motif
zf-DNL	PF05180.12	gi|284162527|ref|YP_003401150.1|	-	0.0024	17.8	0.2	0.45	10.5	0.0	2.1	2	0	0	2	2	2	2	DNL	zinc	finger
Glutaredoxin	PF00462.24	gi|284162527|ref|YP_003401150.1|	-	0.13	12.4	0.1	0.13	12.4	0.1	1.9	1	1	0	2	2	2	0	Glutaredoxin
Cas_Cas4	PF01930.17	gi|284162528|ref|YP_003401151.1|	-	5.4e-10	39.6	4.4	3.5e-09	37.0	1.0	2.1	1	1	0	2	2	2	2	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|284162528|ref|YP_003401151.1|	-	6.9e-07	29.4	0.7	6.9e-07	29.4	0.7	1.9	1	1	1	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
PDDEXK_1	PF12705.7	gi|284162529|ref|YP_003401152.1|	-	0.012	15.5	4.3	6.7	6.5	0.0	2.9	1	1	1	2	2	2	0	PD-(D/E)XK	nuclease	superfamily
Shikimate_DH	PF01488.20	gi|284162530|ref|YP_003401153.1|	-	8.5e-36	123.1	0.1	9.9e-35	119.6	0.1	2.3	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_N	PF05201.15	gi|284162530|ref|YP_003401153.1|	-	3.5e-35	120.9	0.0	1e-34	119.4	0.0	1.8	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.20	gi|284162530|ref|YP_003401153.1|	-	8.6e-18	64.6	3.7	2.2e-17	63.3	3.7	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
2-Hacid_dh_C	PF02826.19	gi|284162530|ref|YP_003401153.1|	-	3.1e-06	26.7	0.1	5.9e-06	25.8	0.1	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
OCD_Mu_crystall	PF02423.15	gi|284162530|ref|YP_003401153.1|	-	1.2e-05	24.4	0.5	0.00017	20.6	0.0	2.7	3	0	0	3	3	3	1	Ornithine	cyclodeaminase/mu-crystallin	family
F420_oxidored	PF03807.17	gi|284162530|ref|YP_003401153.1|	-	3.6e-05	24.2	1.1	0.00012	22.6	0.0	2.3	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|284162530|ref|YP_003401153.1|	-	9.6e-05	22.6	0.3	0.001	19.3	0.0	2.2	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
THF_DHG_CYH_C	PF02882.19	gi|284162530|ref|YP_003401153.1|	-	0.0028	17.0	0.9	0.0062	15.9	0.1	1.9	2	1	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
IlvN	PF07991.12	gi|284162530|ref|YP_003401153.1|	-	0.0029	17.2	0.0	0.0062	16.1	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
APG6_N	PF17675.1	gi|284162530|ref|YP_003401153.1|	-	0.021	15.3	7.0	0.037	14.6	7.0	1.3	1	0	0	1	1	1	0	Apg6	coiled-coil	region
NAD_binding_7	PF13241.6	gi|284162530|ref|YP_003401153.1|	-	0.04	14.4	0.1	0.16	12.5	0.1	2.0	1	0	0	1	1	1	0	Putative	NAD(P)-binding
DUF4140	PF13600.6	gi|284162530|ref|YP_003401153.1|	-	0.06	13.8	0.4	0.14	12.6	0.4	1.6	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
Sacchrp_dh_NADP	PF03435.18	gi|284162530|ref|YP_003401153.1|	-	0.069	13.4	0.0	0.16	12.2	0.0	1.7	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
ACDC	PF14733.6	gi|284162530|ref|YP_003401153.1|	-	0.071	13.4	0.1	15	5.9	0.1	2.5	2	0	0	2	2	2	0	AP2-coincident	C-terminal
ALAD	PF00490.21	gi|284162531|ref|YP_003401154.1|	-	4.9e-143	476.1	0.1	5.4e-143	475.9	0.1	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
DUF1265	PF06887.14	gi|284162531|ref|YP_003401154.1|	-	0.14	12.1	0.0	0.24	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1265)
Aminotran_1_2	PF00155.21	gi|284162532|ref|YP_003401155.1|	-	2.4e-67	227.7	0.0	2.7e-67	227.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|284162532|ref|YP_003401155.1|	-	1.3e-10	40.9	0.0	9.4e-10	38.0	0.0	2.0	1	1	1	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|284162532|ref|YP_003401155.1|	-	1.4e-08	33.7	0.1	1.9e-08	33.3	0.1	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.13	gi|284162532|ref|YP_003401155.1|	-	7.7e-07	28.3	0.1	0.0047	15.8	0.1	2.2	1	1	1	2	2	2	2	Allinase
Beta_elim_lyase	PF01212.21	gi|284162532|ref|YP_003401155.1|	-	0.0011	18.3	0.0	0.0017	17.7	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
NAD_binding_3	PF03447.16	gi|284162532|ref|YP_003401155.1|	-	0.034	14.8	0.0	0.15	12.7	0.0	2.1	2	0	0	2	2	2	0	Homoserine	dehydrogenase,	NAD	binding	domain
Acetyltransf_1	PF00583.25	gi|284162533|ref|YP_003401156.1|	-	1.4e-05	25.3	0.0	1.9e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_6	PF13480.7	gi|284162533|ref|YP_003401156.1|	-	0.11	12.6	0.0	0.24	11.5	0.0	1.5	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DNA_topoisoIV	PF00521.20	gi|284162534|ref|YP_003401157.1|	-	4.7e-162	539.7	2.1	5.9e-162	539.4	2.1	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.13	gi|284162534|ref|YP_003401157.1|	-	1.9e-32	110.5	12.9	7e-15	54.2	0.0	5.9	5	1	1	6	6	6	4	DNA	gyrase	C-terminal	domain,	beta-propeller
EF_TS	PF00889.19	gi|284162534|ref|YP_003401157.1|	-	0.1	12.2	1.7	0.24	11.0	1.2	1.8	1	1	0	1	1	1	0	Elongation	factor	TS
DASH_Dad3	PF08656.10	gi|284162534|ref|YP_003401157.1|	-	0.14	12.2	0.9	0.44	10.7	0.1	2.2	1	1	1	2	2	2	0	DASH	complex	subunit	Dad3
Radical_SAM	PF04055.21	gi|284162535|ref|YP_003401158.1|	-	1.1e-23	84.5	0.1	3.6e-23	82.7	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284162535|ref|YP_003401158.1|	-	0.0024	18.0	0.0	0.0086	16.2	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
TRAM	PF01938.20	gi|284162535|ref|YP_003401158.1|	-	0.093	12.7	0.5	0.21	11.6	0.2	1.8	2	0	0	2	2	2	0	TRAM	domain
TrmB	PF01978.19	gi|284162536|ref|YP_003401159.1|	-	0.00016	21.5	0.5	0.00019	21.3	0.5	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Caprin-1_dimer	PF18293.1	gi|284162536|ref|YP_003401159.1|	-	0.011	16.3	0.3	0.012	16.1	0.3	1.0	1	0	0	1	1	1	0	Caprin-1	dimerization	domain
HTH_45	PF14947.6	gi|284162536|ref|YP_003401159.1|	-	0.011	15.7	0.1	0.012	15.6	0.1	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix
Penicillinase_R	PF03965.16	gi|284162536|ref|YP_003401159.1|	-	0.012	16.0	0.6	0.032	14.6	0.2	1.7	1	1	1	2	2	2	0	Penicillinase	repressor
HemN_C	PF06969.16	gi|284162536|ref|YP_003401159.1|	-	0.013	15.5	0.0	0.017	15.1	0.0	1.3	1	1	0	1	1	1	0	HemN	C-terminal	domain
Rrf2	PF02082.20	gi|284162536|ref|YP_003401159.1|	-	0.036	14.4	0.0	0.056	13.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
FeoC	PF09012.10	gi|284162536|ref|YP_003401159.1|	-	0.045	13.8	0.2	0.076	13.1	0.1	1.4	1	1	1	2	2	2	0	FeoC	like	transcriptional	regulator
RuvB_C	PF05491.13	gi|284162536|ref|YP_003401159.1|	-	0.071	13.0	0.1	0.082	12.8	0.1	1.1	1	0	0	1	1	1	0	RuvB	C-terminal	winged	helix	domain
SpoU_methylase	PF00588.19	gi|284162537|ref|YP_003401160.1|	-	1.3e-40	138.8	0.0	3.4e-40	137.5	0.0	1.6	2	0	0	2	2	2	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.12	gi|284162537|ref|YP_003401160.1|	-	3.2e-09	36.9	0.5	1.6e-08	34.7	0.0	2.3	3	0	0	3	3	3	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
Ribosomal_L7Ae	PF01248.26	gi|284162537|ref|YP_003401160.1|	-	1.3e-05	24.8	0.3	2.8e-05	23.8	0.3	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.6	gi|284162537|ref|YP_003401160.1|	-	0.0051	16.7	0.0	0.0096	15.8	0.0	1.4	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
Peripla_BP_4	PF13407.6	gi|284162537|ref|YP_003401160.1|	-	0.1	12.1	1.9	10	5.6	0.1	3.0	2	1	1	3	3	3	0	Periplasmic	binding	protein	domain
Isochorismatase	PF00857.20	gi|284162537|ref|YP_003401160.1|	-	0.15	12.2	0.1	1.4	9.1	0.0	2.0	2	0	0	2	2	2	0	Isochorismatase	family
EamA	PF00892.20	gi|284162538|ref|YP_003401161.1|	-	1.3e-26	93.4	17.5	1.5e-26	93.2	17.5	1.0	1	0	0	1	1	1	1	EamA-like	transporter	family
TPT	PF03151.16	gi|284162538|ref|YP_003401161.1|	-	2.7e-07	30.2	9.2	3.1e-07	30.0	9.2	1.0	1	0	0	1	1	1	1	Triose-phosphate	Transporter	family
TMEM234	PF10639.9	gi|284162538|ref|YP_003401161.1|	-	0.00031	20.7	10.0	0.0017	18.4	10.0	2.1	1	1	0	1	1	1	1	Putative	transmembrane	family	234
UAA	PF08449.11	gi|284162538|ref|YP_003401161.1|	-	0.084	12.1	7.6	0.1	11.8	7.6	1.1	1	0	0	1	1	1	0	UAA	transporter	family
Flavi_M	PF01004.19	gi|284162538|ref|YP_003401161.1|	-	0.43	10.4	3.5	0.23	11.3	0.7	1.9	1	1	1	2	2	2	0	Flavivirus	envelope	glycoprotein	M
Peptidase_U4	PF03419.13	gi|284162538|ref|YP_003401161.1|	-	0.76	9.0	8.0	0.87	8.8	8.0	1.1	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
DUF2070	PF09843.9	gi|284162538|ref|YP_003401161.1|	-	5.5	5.1	14.9	6.3	5.0	14.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
CHD5	PF04420.14	gi|284162539|ref|YP_003401162.1|	-	0.0028	17.6	0.7	0.007	16.2	0.7	1.6	1	0	0	1	1	1	1	CHD5-like	protein
Use1	PF09753.9	gi|284162539|ref|YP_003401162.1|	-	0.078	12.7	0.3	0.11	12.2	0.3	1.2	1	0	0	1	1	1	0	Membrane	fusion	protein	Use1
Vpu	PF00558.19	gi|284162539|ref|YP_003401162.1|	-	0.18	11.6	0.0	0.18	11.6	0.0	2.6	3	0	0	3	3	3	0	Vpu	protein
DUF1275	PF06912.11	gi|284162539|ref|YP_003401162.1|	-	0.45	10.4	3.3	0.31	10.9	0.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1275)
TMEM208_SND2	PF05620.11	gi|284162539|ref|YP_003401162.1|	-	2.7	7.8	7.7	0.39	10.5	3.8	1.6	2	0	0	2	2	2	0	SRP-independent	targeting	protein	2/TMEM208
AIRS_C	PF02769.22	gi|284162541|ref|YP_003401164.1|	-	3.7e-15	56.4	2.3	4.3e-15	56.2	1.2	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|284162541|ref|YP_003401164.1|	-	2.2e-09	37.9	1.3	5.9e-09	36.5	1.3	1.8	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
NYD-SP28	PF14772.6	gi|284162541|ref|YP_003401164.1|	-	0.017	15.2	0.3	0.043	13.9	0.3	1.7	1	0	0	1	1	1	0	Sperm	tail
PAS_9	PF13426.7	gi|284162541|ref|YP_003401164.1|	-	0.14	12.4	0.1	0.45	10.8	0.0	1.9	2	0	0	2	2	2	0	PAS	domain
Prefoldin_2	PF01920.20	gi|284162541|ref|YP_003401164.1|	-	0.2	11.6	0.9	9.6	6.2	0.0	2.6	2	0	0	2	2	2	0	Prefoldin	subunit
PRC	PF05239.16	gi|284162542|ref|YP_003401165.1|	-	9.4e-11	41.6	0.2	1e-10	41.5	0.2	1.0	1	0	0	1	1	1	1	PRC-barrel	domain
DUF1614	PF07758.11	gi|284162543|ref|YP_003401166.1|	-	4.9e-50	169.9	15.3	7.8e-50	169.2	15.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
Chaperone_III	PF07824.12	gi|284162544|ref|YP_003401167.1|	-	0.089	13.0	0.0	0.22	11.8	0.0	1.5	1	1	1	2	2	2	0	Type	III	secretion	chaperone	domain
AdoHcyase	PF05221.17	gi|284162545|ref|YP_003401168.1|	-	6.8e-63	212.6	0.0	1.7e-30	106.2	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|284162545|ref|YP_003401168.1|	-	3.6e-51	173.4	2.0	3.8e-51	173.4	0.6	1.7	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|284162545|ref|YP_003401168.1|	-	1.7e-10	40.5	0.1	4.7e-10	39.1	0.1	1.7	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|284162545|ref|YP_003401168.1|	-	1.1e-08	34.9	0.1	5.5e-08	32.6	0.1	1.9	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
THF_DHG_CYH_C	PF02882.19	gi|284162545|ref|YP_003401168.1|	-	0.013	14.8	0.2	0.072	12.4	0.2	2.0	1	1	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
3HCDH_N	PF02737.18	gi|284162545|ref|YP_003401168.1|	-	0.019	14.8	1.2	1.3	8.8	0.5	3.0	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|284162545|ref|YP_003401168.1|	-	0.24	10.7	1.8	0.52	9.6	1.8	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DUF2150	PF09920.9	gi|284162546|ref|YP_003401169.1|	-	4.3e-54	183.3	5.1	5.3e-54	183.1	5.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
DUF2857	PF11198.8	gi|284162546|ref|YP_003401169.1|	-	0.0036	17.1	0.0	0.0054	16.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2857)
HHH_4	PF14490.6	gi|284162546|ref|YP_003401169.1|	-	0.09	12.8	0.7	0.26	11.3	0.2	2.0	2	0	0	2	2	2	0	Helix-hairpin-helix	containing	domain
Methyltrn_RNA_2	PF04013.12	gi|284162547|ref|YP_003401170.1|	-	2.6e-68	229.6	0.0	2.9e-68	229.5	0.0	1.0	1	0	0	1	1	1	1	Putative	SAM-dependent	RNA	methyltransferase
SpoU_methylase	PF00588.19	gi|284162547|ref|YP_003401170.1|	-	0.031	14.5	0.0	0.75	10.0	0.0	2.1	1	1	1	2	2	2	0	SpoU	rRNA	Methylase	family
Radical_SAM	PF04055.21	gi|284162548|ref|YP_003401171.1|	-	6.4e-26	91.7	0.0	8.7e-25	88.0	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
AP_endonuc_2	PF01261.24	gi|284162548|ref|YP_003401171.1|	-	0.0016	18.0	0.0	0.014	14.9	0.0	2.1	1	1	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
Fer4_12	PF13353.6	gi|284162548|ref|YP_003401171.1|	-	0.005	17.1	0.2	0.01	16.1	0.0	1.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DZR	PF12773.7	gi|284162548|ref|YP_003401171.1|	-	0.014	15.4	0.1	0.014	15.4	0.1	2.7	3	0	0	3	3	3	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|284162548|ref|YP_003401171.1|	-	0.018	14.4	8.8	0.062	12.7	0.0	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
Fer4_14	PF13394.6	gi|284162548|ref|YP_003401171.1|	-	0.079	13.1	1.4	0.44	10.7	0.0	2.4	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
SET_assoc	PF11767.8	gi|284162548|ref|YP_003401171.1|	-	0.16	11.7	0.7	5.2	6.8	0.0	2.9	2	0	0	2	2	2	0	Histone	lysine	methyltransferase	SET	associated
Zn_Tnp_IS1595	PF12760.7	gi|284162548|ref|YP_003401171.1|	-	0.24	11.4	11.5	8.3	6.5	0.0	4.2	4	0	0	4	4	4	0	Transposase	zinc-ribbon	domain
HypA	PF01155.19	gi|284162548|ref|YP_003401171.1|	-	0.28	11.2	2.7	24	5.0	0.0	3.0	3	0	0	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-C4_Topoisom	PF01396.19	gi|284162548|ref|YP_003401171.1|	-	1.4	8.8	7.2	1.7	8.5	0.0	3.4	4	0	0	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF1610	PF07754.11	gi|284162548|ref|YP_003401171.1|	-	1.4	8.9	6.9	0.51	10.3	1.1	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Zn-ribbon_8	PF09723.10	gi|284162548|ref|YP_003401171.1|	-	2.9	8.1	9.2	12	6.1	0.0	3.9	4	0	0	4	4	4	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|284162548|ref|YP_003401171.1|	-	6.2	6.7	14.8	0.62	9.9	0.6	3.3	2	1	1	3	3	3	0	zinc-ribbon	domain
PHP	PF02811.19	gi|284162549|ref|YP_003401172.1|	-	3.9e-10	40.3	0.2	1e-09	38.9	0.2	1.6	1	1	0	1	1	1	1	PHP	domain
SIS_2	PF13580.6	gi|284162549|ref|YP_003401172.1|	-	0.054	13.5	0.1	2.1	8.4	0.1	2.4	2	0	0	2	2	2	0	SIS	domain
PHP_C	PF13263.6	gi|284162549|ref|YP_003401172.1|	-	0.067	13.0	0.0	0.21	11.4	0.0	1.9	2	0	0	2	2	2	0	PHP-associated
ParA	PF10609.9	gi|284162550|ref|YP_003401173.1|	-	1.9e-98	328.8	0.4	2.3e-98	328.5	0.4	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|284162550|ref|YP_003401173.1|	-	1.4e-17	64.0	0.0	2.1e-16	60.1	0.0	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|284162550|ref|YP_003401173.1|	-	2.8e-15	56.7	1.8	3.3e-14	53.2	1.8	2.0	1	1	0	1	1	1	1	AAA	domain
MipZ	PF09140.11	gi|284162550|ref|YP_003401173.1|	-	1.5e-09	37.6	0.0	3.6e-09	36.3	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.15	gi|284162550|ref|YP_003401173.1|	-	4.5e-07	29.4	2.7	1.7e-06	27.4	0.8	2.3	2	1	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.18	gi|284162550|ref|YP_003401173.1|	-	1.1e-06	28.4	0.1	0.00034	20.1	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Desulfoferrod_N	PF06397.12	gi|284162550|ref|YP_003401173.1|	-	0.0001	21.8	1.1	0.00021	20.8	1.1	1.5	1	0	0	1	1	1	1	Desulfoferrodoxin,	N-terminal	domain
VirC1	PF07015.11	gi|284162550|ref|YP_003401173.1|	-	0.00078	18.8	0.1	0.0013	18.1	0.1	1.3	1	0	0	1	1	1	1	VirC1	protein
GFO_IDH_MocA	PF01408.22	gi|284162550|ref|YP_003401173.1|	-	0.0011	19.7	0.0	0.0022	18.8	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
AAA_25	PF13481.6	gi|284162550|ref|YP_003401173.1|	-	0.0012	18.5	0.0	0.0066	16.0	0.1	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.6	gi|284162550|ref|YP_003401173.1|	-	0.0012	18.8	0.6	0.67	9.7	0.3	2.4	2	1	0	2	2	2	2	AAA	domain
CBP_BcsQ	PF06564.12	gi|284162550|ref|YP_003401173.1|	-	0.0012	18.4	0.3	0.03	13.8	0.2	2.0	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
APS_kinase	PF01583.20	gi|284162550|ref|YP_003401173.1|	-	0.0012	18.7	0.1	0.0025	17.7	0.1	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
CLP1_P	PF16575.5	gi|284162550|ref|YP_003401173.1|	-	0.0022	17.8	0.1	0.0047	16.7	0.1	1.8	1	1	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MeaB	PF03308.16	gi|284162550|ref|YP_003401173.1|	-	0.0046	16.0	0.2	0.009	15.0	0.2	1.4	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SRP54	PF00448.22	gi|284162550|ref|YP_003401173.1|	-	0.0087	15.7	0.6	0.0087	15.7	0.6	1.7	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.15	gi|284162550|ref|YP_003401173.1|	-	0.012	15.5	1.5	0.12	12.3	0.2	2.4	2	0	0	2	2	2	0	NTPase
IstB_IS21	PF01695.17	gi|284162550|ref|YP_003401173.1|	-	0.041	13.6	0.1	0.077	12.7	0.1	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
MobB	PF03205.14	gi|284162550|ref|YP_003401173.1|	-	0.058	13.3	0.1	0.11	12.4	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KTI12	PF08433.10	gi|284162550|ref|YP_003401173.1|	-	0.065	12.7	0.1	0.12	11.8	0.1	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
RsgA_GTPase	PF03193.16	gi|284162550|ref|YP_003401173.1|	-	0.087	12.7	0.9	0.19	11.6	0.2	1.8	2	0	0	2	2	2	0	RsgA	GTPase
Zn_Tnp_IS1595	PF12760.7	gi|284162550|ref|YP_003401173.1|	-	0.1	12.6	0.1	0.19	11.7	0.1	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
SIS_2	PF13580.6	gi|284162550|ref|YP_003401173.1|	-	0.16	12.0	1.1	0.4	10.7	0.0	2.1	3	0	0	3	3	3	0	SIS	domain
AAA_33	PF13671.6	gi|284162550|ref|YP_003401173.1|	-	0.2	11.8	0.2	0.89	9.7	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|284162550|ref|YP_003401173.1|	-	0.21	11.5	0.6	0.38	10.7	0.6	1.4	1	0	0	1	1	1	0	NACHT	domain
PAS	PF00989.25	gi|284162551|ref|YP_003401174.1|	-	6.9e-12	45.4	0.0	3e-11	43.3	0.0	2.0	2	0	0	2	2	2	1	PAS	fold
PAS_9	PF13426.7	gi|284162551|ref|YP_003401174.1|	-	1.1e-11	44.9	0.0	5.2e-11	42.7	0.0	2.2	2	0	0	2	2	2	1	PAS	domain
PAS_4	PF08448.10	gi|284162551|ref|YP_003401174.1|	-	1.4e-11	44.6	0.0	3.4e-11	43.4	0.0	1.7	1	0	0	1	1	1	1	PAS	fold
PAS_3	PF08447.12	gi|284162551|ref|YP_003401174.1|	-	2.6e-11	43.6	0.0	9.9e-11	41.8	0.0	1.9	2	0	0	2	2	2	1	PAS	fold
HisKA	PF00512.25	gi|284162551|ref|YP_003401174.1|	-	1.8e-05	24.7	0.1	1.8e-05	24.7	0.1	2.7	3	1	1	4	4	4	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_8	PF13188.7	gi|284162551|ref|YP_003401174.1|	-	0.0001	22.2	0.0	0.00037	20.4	0.0	2.0	2	0	0	2	2	2	1	PAS	domain
GAF_2	PF13185.6	gi|284162551|ref|YP_003401174.1|	-	0.00054	20.3	0.0	0.001	19.4	0.0	1.4	1	0	0	1	1	1	1	GAF	domain
Response_reg	PF00072.24	gi|284162551|ref|YP_003401174.1|	-	0.0015	18.7	0.0	0.0061	16.7	0.0	2.0	2	0	0	2	2	1	1	Response	regulator	receiver	domain
PAS_11	PF14598.6	gi|284162551|ref|YP_003401174.1|	-	0.0091	16.1	0.0	0.025	14.7	0.0	1.7	1	0	0	1	1	1	1	PAS	domain
SbcD_C	PF12320.8	gi|284162551|ref|YP_003401174.1|	-	0.051	13.9	0.7	0.17	12.2	0.1	2.2	2	0	0	2	2	2	0	Type	5	capsule	protein	repressor	C-terminal	domain
DUF4888	PF16229.5	gi|284162551|ref|YP_003401174.1|	-	0.14	12.1	0.0	0.34	10.9	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4888)
Bac_small_YrzI	PF09501.10	gi|284162551|ref|YP_003401174.1|	-	4.8	7.4	6.4	0.63	10.2	0.8	2.5	2	0	0	2	2	2	0	Probable	sporulation	protein	(Bac_small_yrzI)
Na_Ca_ex	PF01699.24	gi|284162552|ref|YP_003401175.1|	-	5.5e-26	91.3	27.0	1.6e-17	63.9	6.4	2.9	3	0	0	3	3	3	2	Sodium/calcium	exchanger	protein
PPDK_N	PF01326.19	gi|284162553|ref|YP_003401176.1|	-	1.3e-116	389.5	1.4	2.7e-116	388.5	1.4	1.5	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|284162553|ref|YP_003401176.1|	-	2.1e-87	293.0	0.6	4.5e-87	291.9	0.6	1.5	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|284162553|ref|YP_003401176.1|	-	5.6e-27	93.3	3.2	1.7e-26	91.7	3.2	1.9	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
HpcH_HpaI	PF03328.14	gi|284162553|ref|YP_003401176.1|	-	0.00011	21.5	0.1	0.00044	19.5	0.1	1.9	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
Vps54_N	PF10475.9	gi|284162553|ref|YP_003401176.1|	-	0.022	14.0	0.1	0.042	13.1	0.1	1.3	1	0	0	1	1	1	0	Vacuolar-sorting	protein	54,	of	GARP	complex
Epimerase_2	PF02350.19	gi|284162553|ref|YP_003401176.1|	-	0.045	12.6	0.8	0.28	10.0	0.1	2.3	3	0	0	3	3	3	0	UDP-N-acetylglucosamine	2-epimerase
DUF4230	PF14014.6	gi|284162553|ref|YP_003401176.1|	-	0.061	13.6	0.0	0.19	12.0	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4230)
ALMT	PF11744.8	gi|284162553|ref|YP_003401176.1|	-	0.074	11.9	0.4	0.11	11.3	0.4	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
PEP-utilisers_N	PF05524.13	gi|284162553|ref|YP_003401176.1|	-	0.11	12.7	0.6	3	8.0	0.0	3.0	2	0	0	2	2	2	0	PEP-utilising	enzyme,	N-terminal
Titin_Z	PF09042.11	gi|284162553|ref|YP_003401176.1|	-	0.12	12.3	2.7	0.49	10.4	2.7	2.1	1	0	0	1	1	1	0	Titin	Z
DRTGG	PF07085.12	gi|284162553|ref|YP_003401176.1|	-	0.13	12.1	0.3	1.1	9.0	0.1	2.3	1	1	1	2	2	2	0	DRTGG	domain
polyprenyl_synt	PF00348.17	gi|284162554|ref|YP_003401177.1|	-	7.5e-49	166.1	0.1	8.8e-49	165.9	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
UPF0020	PF01170.18	gi|284162555|ref|YP_003401178.1|	-	2.5e-54	183.9	0.0	3.2e-54	183.6	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.17	gi|284162555|ref|YP_003401178.1|	-	2.8e-27	95.6	1.0	2.8e-27	95.6	1.0	1.8	2	0	0	2	2	2	1	THUMP	domain
N6_Mtase	PF02384.16	gi|284162555|ref|YP_003401178.1|	-	2.8e-05	23.6	0.0	7.7e-05	22.1	0.0	1.6	1	1	0	1	1	1	1	N-6	DNA	Methylase
N6_N4_Mtase	PF01555.18	gi|284162555|ref|YP_003401178.1|	-	9.6e-05	22.2	0.0	0.00085	19.1	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_15	PF09445.10	gi|284162555|ref|YP_003401178.1|	-	0.00046	19.8	0.0	0.0043	16.6	0.0	2.1	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Eco57I	PF07669.11	gi|284162555|ref|YP_003401178.1|	-	0.019	15.4	0.0	0.037	14.5	0.0	1.4	1	0	0	1	1	1	0	Eco57I	restriction-modification	methylase
AviRa	PF11599.8	gi|284162555|ref|YP_003401178.1|	-	0.034	13.6	0.1	0.23	10.9	0.0	1.9	2	0	0	2	2	2	0	RRNA	methyltransferase	AviRa
EcoRI_methylase	PF13651.6	gi|284162555|ref|YP_003401178.1|	-	0.08	12.1	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Adenine-specific	methyltransferase	EcoRI
MTS	PF05175.14	gi|284162555|ref|YP_003401178.1|	-	0.13	11.8	0.0	0.34	10.4	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	small	domain
DUF1887	PF09002.11	gi|284162556|ref|YP_003401179.1|	-	0.035	12.8	0.1	0.039	12.6	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1887)
UPF0697	PF15117.6	gi|284162556|ref|YP_003401179.1|	-	0.16	12.0	0.0	0.18	11.9	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0697
Yip1	PF04893.17	gi|284162557|ref|YP_003401180.1|	-	7.1e-27	94.2	10.0	8.8e-27	93.9	10.0	1.1	1	0	0	1	1	1	1	Yip1	domain
DUF1282	PF06930.12	gi|284162557|ref|YP_003401180.1|	-	1.9e-06	27.8	7.6	2.2e-06	27.6	7.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1282)
DUF4199	PF13858.6	gi|284162557|ref|YP_003401180.1|	-	0.016	15.7	4.1	0.016	15.7	4.1	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
Bacteriocin_IIc	PF10439.9	gi|284162557|ref|YP_003401180.1|	-	6.3	7.0	5.7	7.7	6.7	0.8	2.3	2	0	0	2	2	2	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
PHO4	PF01384.20	gi|284162557|ref|YP_003401180.1|	-	6.6	5.7	12.6	85	2.0	12.6	2.1	1	1	0	1	1	1	0	Phosphate	transporter	family
ILVD_EDD	PF00920.21	gi|284162558|ref|YP_003401181.1|	-	6.4e-208	691.6	0.0	7.2e-208	691.4	0.0	1.0	1	0	0	1	1	1	1	Dehydratase	family
DUF3006	PF11213.8	gi|284162558|ref|YP_003401181.1|	-	0.032	14.5	1.1	1.9	8.8	0.1	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3006)
GIT_SHD	PF08518.11	gi|284162558|ref|YP_003401181.1|	-	0.17	11.5	0.1	0.38	10.4	0.1	1.6	1	0	0	1	1	1	0	Spa2	homology	domain	(SHD)	of	GIT
Amidohydro_1	PF01979.20	gi|284162559|ref|YP_003401182.1|	-	9.5e-07	28.4	0.2	0.00015	21.2	0.2	2.9	1	1	0	1	1	1	1	Amidohydrolase	family
DUF4229	PF14012.6	gi|284162560|ref|YP_003401183.1|	-	1.8	8.7	7.9	1.2	9.3	0.1	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4229)
PetM	PF08041.11	gi|284162560|ref|YP_003401183.1|	-	5.4	6.7	9.4	0.18	11.4	1.6	2.5	3	0	0	3	3	3	0	PetM	family	of	cytochrome	b6f	complex	subunit	7
HAD	PF12710.7	gi|284162562|ref|YP_003401185.1|	-	9.7e-24	84.8	0.1	1.5e-23	84.2	0.1	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
ACT_6	PF13740.6	gi|284162562|ref|YP_003401185.1|	-	5e-22	77.7	0.7	5.8e-12	45.4	0.0	2.4	2	0	0	2	2	2	2	ACT	domain
Hydrolase	PF00702.26	gi|284162562|ref|YP_003401185.1|	-	1.7e-20	74.2	2.7	5.7e-20	72.5	2.3	1.9	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
ACT	PF01842.25	gi|284162562|ref|YP_003401185.1|	-	9.7e-17	60.4	5.3	1.2e-07	31.4	0.0	3.4	3	0	0	3	3	3	2	ACT	domain
Hydrolase_3	PF08282.12	gi|284162562|ref|YP_003401185.1|	-	2.6e-15	56.8	3.1	9.3e-11	41.9	0.8	3.3	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|284162562|ref|YP_003401185.1|	-	9.8e-13	48.6	2.0	2.4e-11	44.0	2.0	2.4	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
ACT_4	PF13291.6	gi|284162562|ref|YP_003401185.1|	-	6.6e-10	39.4	3.7	0.0002	21.9	0.3	3.0	3	0	0	3	3	3	2	ACT	domain
Put_Phosphatase	PF06888.12	gi|284162562|ref|YP_003401185.1|	-	1.3e-08	34.6	0.0	6.2e-06	25.8	0.0	2.2	2	0	0	2	2	2	2	Putative	Phosphatase
ACT_7	PF13840.6	gi|284162562|ref|YP_003401185.1|	-	4.1e-05	23.3	0.5	0.93	9.3	0.1	3.3	3	0	0	3	3	3	2	ACT	domain
AA_kinase	PF00696.28	gi|284162562|ref|YP_003401185.1|	-	0.0019	17.9	0.2	0.014	15.0	0.1	2.2	2	0	0	2	2	2	1	Amino	acid	kinase	family
NitrOD2	PF18550.1	gi|284162562|ref|YP_003401185.1|	-	0.038	14.1	0.9	0.093	12.9	0.1	2.0	2	0	0	2	2	2	0	Nitrososphaera	output	domain	2
Hydrolase_6	PF13344.6	gi|284162562|ref|YP_003401185.1|	-	0.04	14.0	0.0	0.18	12.0	0.0	2.2	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
B12-binding	PF02310.19	gi|284162562|ref|YP_003401185.1|	-	0.05	13.7	0.0	0.68	10.0	0.0	2.6	2	0	0	2	2	2	0	B12	binding	domain
Cytidylate_kin2	PF13189.6	gi|284162562|ref|YP_003401185.1|	-	0.057	13.5	0.7	3.1	7.9	0.1	2.8	2	1	1	3	3	3	0	Cytidylate	kinase-like	family
Acid_PPase	PF12689.7	gi|284162562|ref|YP_003401185.1|	-	0.071	13.0	0.0	0.27	11.1	0.0	2.0	1	1	0	1	1	1	0	Acid	Phosphatase
S6PP	PF05116.13	gi|284162562|ref|YP_003401185.1|	-	0.11	12.0	0.1	5.3	6.5	0.0	2.3	2	0	0	2	2	2	0	Sucrose-6F-phosphate	phosphohydrolase
sCache_like	PF16736.5	gi|284162562|ref|YP_003401185.1|	-	0.26	11.4	4.6	0.95	9.6	0.1	3.3	4	0	0	4	4	3	0	Single	Cache-like
Sulfatase	PF00884.23	gi|284162562|ref|YP_003401185.1|	-	0.29	10.5	0.0	0.46	9.8	0.0	1.2	1	0	0	1	1	1	0	Sulfatase
Glyco_hydro_30C	PF17189.4	gi|284162563|ref|YP_003401186.1|	-	0.06	13.6	0.0	0.076	13.2	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	30	beta	sandwich	domain
Ribosomal_L16	PF00252.18	gi|284162564|ref|YP_003401187.1|	-	2.2e-34	118.3	0.1	2.8e-34	118.0	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
NAD_synthase	PF02540.17	gi|284162565|ref|YP_003401188.1|	-	2.5e-87	292.0	0.1	7.4e-49	166.0	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|284162565|ref|YP_003401188.1|	-	4.1e-07	29.1	0.0	9.8e-06	24.6	0.0	2.2	2	0	0	2	2	2	1	tRNA	methyl	transferase
Intein_splicing	PF14890.6	gi|284162565|ref|YP_003401188.1|	-	3.2e-05	23.9	0.0	8.9e-05	22.4	0.0	1.8	1	1	0	1	1	1	1	Intein	splicing	domain
Hint_2	PF13403.6	gi|284162565|ref|YP_003401188.1|	-	0.00045	20.5	0.1	0.022	15.1	0.0	2.9	2	1	0	2	2	2	1	Hint	domain
LAGLIDADG_3	PF14528.6	gi|284162565|ref|YP_003401188.1|	-	0.00073	19.8	0.1	0.037	14.3	0.0	2.9	2	0	0	2	2	2	1	LAGLIDADG-like	domain
Hom_end	PF05204.14	gi|284162565|ref|YP_003401188.1|	-	0.0035	17.5	0.0	0.038	14.2	0.0	2.7	3	0	0	3	3	3	1	Homing	endonuclease
PT-HINT	PF07591.11	gi|284162565|ref|YP_003401188.1|	-	0.0084	16.4	0.0	0.017	15.4	0.0	1.5	1	0	0	1	1	1	1	Pretoxin	HINT	domain
DUF433	PF04255.14	gi|284162565|ref|YP_003401188.1|	-	0.015	15.1	0.0	0.054	13.4	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF433)
QueC	PF06508.13	gi|284162565|ref|YP_003401188.1|	-	0.019	14.5	0.0	0.21	11.1	0.0	2.2	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
CHU_C	PF13585.6	gi|284162565|ref|YP_003401188.1|	-	0.089	12.9	0.0	0.25	11.4	0.0	1.9	1	0	0	1	1	1	0	C-terminal	domain	of	CHU	protein	family
Hint	PF01079.20	gi|284162565|ref|YP_003401188.1|	-	0.12	11.9	0.0	0.27	10.7	0.0	1.5	1	1	0	1	1	1	0	Hint	module
Cnd1	PF12717.7	gi|284162566|ref|YP_003401189.1|	-	7.9e-07	29.3	0.2	4.5e-06	26.8	0.1	2.1	1	1	1	2	2	2	1	non-SMC	mitotic	condensation	complex	subunit	1
HEAT_2	PF13646.6	gi|284162566|ref|YP_003401189.1|	-	1.4e-05	25.3	0.1	0.00014	22.2	0.1	2.2	2	0	0	2	2	2	1	HEAT	repeats
HEAT	PF02985.22	gi|284162566|ref|YP_003401189.1|	-	4e-05	23.5	0.1	0.00036	20.6	0.0	2.5	2	0	0	2	2	2	1	HEAT	repeat
Adaptin_N	PF01602.20	gi|284162566|ref|YP_003401189.1|	-	0.00031	19.4	2.9	0.009	14.6	0.3	2.0	1	1	0	1	1	1	1	Adaptin	N	terminal	region
HEAT_EZ	PF13513.6	gi|284162566|ref|YP_003401189.1|	-	0.003	18.0	0.0	0.12	12.9	0.0	3.1	2	1	1	3	3	3	1	HEAT-like	repeat
Vitellogenin_N	PF01347.22	gi|284162566|ref|YP_003401189.1|	-	0.06	11.7	0.0	0.068	11.6	0.0	1.2	1	0	0	1	1	1	0	Lipoprotein	amino	terminal	region
Vac14_Fab1_bd	PF12755.7	gi|284162566|ref|YP_003401189.1|	-	0.07	13.7	0.3	0.33	11.6	0.0	2.1	2	0	0	2	2	2	0	Vacuolar	14	Fab1-binding	region
DUF5071	PF16804.5	gi|284162566|ref|YP_003401189.1|	-	0.093	13.0	2.7	0.76	10.0	0.3	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF5071)
DEAD	PF00270.29	gi|284162567|ref|YP_003401190.1|	-	3.3e-23	82.4	0.0	8.4e-23	81.0	0.0	1.6	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|284162567|ref|YP_003401190.1|	-	1.6e-20	73.5	0.0	1.6e-18	67.1	0.0	2.6	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.10	gi|284162567|ref|YP_003401190.1|	-	1.1e-09	38.9	0.1	4.2e-09	37.1	0.1	2.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.15	gi|284162567|ref|YP_003401190.1|	-	2.7e-05	24.2	0.0	4.7e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
IstB_IS21	PF01695.17	gi|284162567|ref|YP_003401190.1|	-	0.0021	17.8	0.0	0.0041	16.9	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
UPF0052	PF01933.18	gi|284162568|ref|YP_003401191.1|	-	9.7e-50	169.5	0.0	1.1e-49	169.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
UPF0180	PF03698.13	gi|284162568|ref|YP_003401191.1|	-	0.032	14.4	0.0	0.068	13.4	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0180)
Peptidase_M24	PF00557.24	gi|284162569|ref|YP_003401192.1|	-	1.9e-45	155.1	0.2	2.2e-45	154.9	0.2	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
ATP-cone	PF03477.16	gi|284162569|ref|YP_003401192.1|	-	0.016	15.7	0.1	6.9	7.3	0.0	2.4	2	0	0	2	2	2	0	ATP	cone	domain
XPG_I	PF00867.18	gi|284162570|ref|YP_003401193.1|	-	7.3e-28	96.8	0.0	1.4e-27	95.8	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.17	gi|284162570|ref|YP_003401193.1|	-	5.7e-23	81.3	0.0	1.2e-22	80.3	0.0	1.5	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.20	gi|284162570|ref|YP_003401193.1|	-	4.1e-05	24.1	0.0	0.00014	22.4	0.0	1.9	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
MoCF_biosynth	PF00994.24	gi|284162571|ref|YP_003401194.1|	-	5.9e-31	107.1	0.0	7.1e-31	106.8	0.0	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Phage_integrase	PF00589.22	gi|284162572|ref|YP_003401195.1|	-	1.3e-11	44.6	0.6	4.6e-11	42.8	0.6	1.9	1	1	0	1	1	1	1	Phage	integrase	family
Phage_integr_3	PF16795.5	gi|284162572|ref|YP_003401195.1|	-	0.002	18.1	0.9	0.0061	16.5	0.9	1.9	1	1	0	1	1	1	1	Archaeal	phage	integrase
Phage_int_SAM_1	PF02899.17	gi|284162572|ref|YP_003401195.1|	-	0.052	13.9	0.9	0.36	11.2	0.1	2.7	2	1	2	4	4	4	0	Phage	integrase,	N-terminal	SAM-like	domain
HTH_23	PF13384.6	gi|284162573|ref|YP_003401196.1|	-	0.011	15.6	0.0	0.012	15.4	0.0	1.2	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF1700	PF08006.11	gi|284162573|ref|YP_003401196.1|	-	0.018	14.5	0.0	0.018	14.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
HTH_38	PF13936.6	gi|284162573|ref|YP_003401196.1|	-	0.02	14.6	0.0	0.029	14.1	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|284162573|ref|YP_003401196.1|	-	0.095	12.4	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
Sec8_exocyst	PF04048.14	gi|284162574|ref|YP_003401197.1|	-	0.028	14.3	0.9	4.2	7.3	0.6	2.0	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
DUF3305	PF11749.8	gi|284162574|ref|YP_003401197.1|	-	0.051	13.7	0.0	0.06	13.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3305)
EFG_IV	PF03764.18	gi|284162574|ref|YP_003401197.1|	-	0.085	12.6	0.0	0.15	11.8	0.0	1.5	1	1	0	1	1	1	0	Elongation	factor	G,	domain	IV
SMN	PF06003.12	gi|284162574|ref|YP_003401197.1|	-	0.12	11.6	0.1	0.15	11.3	0.1	1.1	1	0	0	1	1	1	0	Survival	motor	neuron	protein	(SMN)
DUF2341	PF10102.9	gi|284162575|ref|YP_003401198.1|	-	1e-21	77.3	1.4	1e-21	77.3	1.4	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF2341)
DUF1080	PF06439.11	gi|284162575|ref|YP_003401198.1|	-	0.00039	20.6	2.8	0.0028	17.8	0.4	2.8	2	1	0	2	2	2	1	Domain	of	Unknown	Function	(DUF1080)
Laminin_G_3	PF13385.6	gi|284162575|ref|YP_003401198.1|	-	0.0006	20.0	1.5	0.0006	20.0	1.5	3.0	2	1	1	3	3	3	1	Concanavalin	A-like	lectin/glucanases	superfamily
Laminin_G_2	PF02210.24	gi|284162575|ref|YP_003401198.1|	-	0.0014	19.2	0.0	0.0042	17.7	0.0	1.8	2	0	0	2	2	2	1	Laminin	G	domain
EF-hand_6	PF13405.6	gi|284162575|ref|YP_003401198.1|	-	4.3	7.5	4.8	6.3	7.0	0.4	2.9	3	0	0	3	3	3	0	EF-hand	domain
DUF2612	PF11041.8	gi|284162576|ref|YP_003401199.1|	-	1.7e-05	24.8	0.4	0.022	14.7	0.1	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2612)
DUF2313	PF10076.9	gi|284162576|ref|YP_003401199.1|	-	0.00059	19.7	0.1	0.001	18.9	0.1	1.4	1	1	0	1	1	1	1	Uncharacterised	protein	conserved	in	bacteria	(DUF2313)
Baseplate_J	PF04865.14	gi|284162576|ref|YP_003401199.1|	-	0.032	13.4	0.0	0.13	11.4	0.0	2.0	1	1	1	2	2	2	0	Baseplate	J-like	protein
Baseplate_J	PF04865.14	gi|284162577|ref|YP_003401200.1|	-	1.4e-40	139.1	5.5	1.4e-40	139.1	5.5	1.8	1	1	1	2	2	2	1	Baseplate	J-like	protein
UN_NPL4	PF11543.8	gi|284162577|ref|YP_003401200.1|	-	0.044	14.3	0.2	0.23	12.0	0.0	2.3	3	0	0	3	3	3	0	Nuclear	pore	localisation	protein	NPL4
DUF2634	PF10934.8	gi|284162578|ref|YP_003401201.1|	-	1.4e-09	38.0	0.0	1.9e-09	37.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2634)
GPW_gp25	PF04965.14	gi|284162578|ref|YP_003401201.1|	-	3.1e-07	30.1	0.0	3.8e-07	29.8	0.0	1.1	1	0	0	1	1	1	1	Gene	25-like	lysozyme
Gp138_N	PF18352.1	gi|284162579|ref|YP_003401202.1|	-	0.0039	17.2	0.0	0.0098	15.9	0.0	1.7	2	0	0	2	2	2	1	Phage	protein	Gp138	N-terminal	domain
DUF1248	PF06852.12	gi|284162580|ref|YP_003401203.1|	-	0.076	12.5	0.2	0.13	11.7	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1248)
PhageMin_Tail	PF10145.9	gi|284162583|ref|YP_003401206.1|	-	2.9e-41	141.5	10.0	8.4e-40	136.7	2.5	3.1	3	0	0	3	3	3	2	Phage-related	minor	tail	protein
DUF348	PF03990.14	gi|284162583|ref|YP_003401206.1|	-	0.07	12.9	0.0	0.23	11.3	0.0	1.9	1	0	0	1	1	1	0	G5-linked-Ubiquitin-like	domain
Syntaxin-6_N	PF09177.11	gi|284162583|ref|YP_003401206.1|	-	0.11	13.0	2.1	2	9.0	0.0	3.8	4	1	1	5	5	5	0	Syntaxin	6,	N-terminal
HR1	PF02185.16	gi|284162583|ref|YP_003401206.1|	-	1.1	9.5	3.9	9.3	6.4	0.1	3.0	3	0	0	3	3	3	0	Hr1	repeat
Laminin_II	PF06009.12	gi|284162583|ref|YP_003401206.1|	-	3.9	7.5	6.8	22	5.1	0.0	4.0	3	1	1	4	4	4	0	Laminin	Domain	II
Lebercilin	PF15619.6	gi|284162583|ref|YP_003401206.1|	-	4.8	6.8	6.0	39	3.8	0.1	3.4	4	0	0	4	4	4	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Tail_VII	PF17091.5	gi|284162584|ref|YP_003401207.1|	-	0.45	10.4	2.8	1.4	8.9	2.8	1.8	1	0	0	1	1	1	0	Inovirus	G7P	protein
NLE	PF08154.12	gi|284162585|ref|YP_003401208.1|	-	0.072	13.6	0.0	0.12	13.0	0.0	1.5	1	1	0	1	1	1	0	NLE	(NUC135)	domain
DUF3467	PF11950.8	gi|284162586|ref|YP_003401209.1|	-	0.0092	16.2	0.0	0.011	15.9	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3467)
TrmB	PF01978.19	gi|284162587|ref|YP_003401210.1|	-	1.4e-05	24.9	0.0	2.9e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|284162587|ref|YP_003401210.1|	-	0.0013	18.8	0.0	0.0023	18.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HxlR	PF01638.17	gi|284162587|ref|YP_003401210.1|	-	0.014	15.2	0.0	0.027	14.3	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
MarR_2	PF12802.7	gi|284162587|ref|YP_003401210.1|	-	0.032	14.1	0.0	0.053	13.4	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Replic_Relax	PF13814.6	gi|284162587|ref|YP_003401210.1|	-	0.032	14.3	0.0	0.037	14.1	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
Rrf2	PF02082.20	gi|284162587|ref|YP_003401210.1|	-	0.051	13.9	0.0	0.093	13.1	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
TFIIE_alpha	PF02002.17	gi|284162587|ref|YP_003401210.1|	-	0.073	12.9	0.1	0.21	11.5	0.0	1.7	2	0	0	2	2	2	0	TFIIE	alpha	subunit
DUF505	PF04458.12	gi|284162587|ref|YP_003401210.1|	-	0.094	11.1	0.0	0.12	10.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
RE_XamI	PF09572.10	gi|284162588|ref|YP_003401211.1|	-	0.0066	16.1	0.1	0.36	10.5	0.0	2.1	1	1	1	2	2	2	2	XamI	restriction	endonuclease
UPF0180	PF03698.13	gi|284162588|ref|YP_003401211.1|	-	0.094	12.9	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0180)
DUF3855	PF12967.7	gi|284162589|ref|YP_003401212.1|	-	0.01	15.8	0.3	0.013	15.4	0.3	1.1	1	0	0	1	1	1	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3855)
SoxY	PF13501.6	gi|284162589|ref|YP_003401212.1|	-	0.094	12.9	0.2	0.51	10.6	0.0	2.1	1	1	1	2	2	2	0	Sulfur	oxidation	protein	SoxY
DUF3383	PF11863.8	gi|284162590|ref|YP_003401213.1|	-	8.3e-18	64.7	4.8	9.2e-14	51.3	0.5	2.2	1	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3383)
Baculo_PEP_C	PF04513.12	gi|284162590|ref|YP_003401213.1|	-	0.048	13.7	0.6	0.14	12.2	0.2	1.9	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Phage_tail_S	PF05069.13	gi|284162592|ref|YP_003401215.1|	-	9.7e-09	35.2	0.0	1.3e-08	34.8	0.0	1.2	1	0	0	1	1	1	1	Phage	virion	morphogenesis	family
HK97-gp10_like	PF04883.12	gi|284162592|ref|YP_003401215.1|	-	1.6e-05	25.8	0.0	3.9e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Bacteriophage	HK97-gp10,	putative	tail-component
EFP_N	PF08207.12	gi|284162593|ref|YP_003401216.1|	-	0.12	12.4	0.8	0.56	10.3	0.1	2.1	2	0	0	2	2	2	0	Elongation	factor	P	(EF-P)	KOW-like	domain
DUF2198	PF09964.9	gi|284162595|ref|YP_003401218.1|	-	0.012	15.7	0.3	0.013	15.6	0.3	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2198)
DUF5362	PF17319.2	gi|284162597|ref|YP_003401220.1|	-	0.025	14.4	0.1	0.03	14.2	0.1	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5362)
DUF1640	PF07798.11	gi|284162597|ref|YP_003401220.1|	-	0.037	14.1	0.0	0.042	13.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
INT_SG_DDX_CT_C	PF15300.6	gi|284162597|ref|YP_003401220.1|	-	0.057	13.2	0.2	4.1	7.3	0.0	2.3	1	1	1	2	2	2	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
Spore_III_AB	PF09548.10	gi|284162597|ref|YP_003401220.1|	-	0.066	13.3	0.1	0.078	13.1	0.1	1.1	1	0	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
APG17	PF04108.12	gi|284162597|ref|YP_003401220.1|	-	0.14	11.3	0.1	0.16	11.1	0.1	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg17
XhlA	PF10779.9	gi|284162597|ref|YP_003401220.1|	-	0.6	10.4	9.6	0.41	10.9	0.6	2.6	2	1	1	3	3	3	0	Haemolysin	XhlA
Phage_capsid	PF05065.13	gi|284162599|ref|YP_003401222.1|	-	6.5e-16	58.5	0.2	8.4e-16	58.1	0.2	1.1	1	0	0	1	1	1	1	Phage	capsid	family
Linocin_M18	PF04454.12	gi|284162599|ref|YP_003401222.1|	-	4.9e-11	42.4	0.6	6.7e-11	42.0	0.6	1.2	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
DUF2184	PF09950.9	gi|284162599|ref|YP_003401222.1|	-	0.00073	19.0	0.4	0.0048	16.3	0.1	2.3	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2184)
DUF2190	PF09956.9	gi|284162600|ref|YP_003401223.1|	-	2.7e-19	69.5	19.7	4.7e-19	68.8	19.7	1.3	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2190)
Peptidase_M23	PF01551.22	gi|284162600|ref|YP_003401223.1|	-	0.68	10.2	7.9	0.22	11.8	0.4	2.7	1	1	2	3	3	3	0	Peptidase	family	M23
Peptidase_S78	PF04586.17	gi|284162601|ref|YP_003401224.1|	-	1.8e-10	41.2	0.1	3.5e-10	40.3	0.1	1.4	1	0	0	1	1	1	1	Caudovirus	prohead	serine	protease
Peptidase_S78_2	PF14550.6	gi|284162601|ref|YP_003401224.1|	-	0.00018	21.5	1.0	0.00056	20.0	0.1	2.2	2	0	0	2	2	2	1	Putative	phage	serine	protease	XkdF
HAP1_N	PF04849.13	gi|284162601|ref|YP_003401224.1|	-	0.00025	20.4	8.7	0.00041	19.7	8.7	1.3	1	0	0	1	1	1	1	HAP1	N-terminal	conserved	region
bZIP_2	PF07716.15	gi|284162601|ref|YP_003401224.1|	-	0.00056	19.9	6.7	0.00056	19.9	6.7	2.9	3	0	0	3	3	3	1	Basic	region	leucine	zipper
bZIP_1	PF00170.21	gi|284162601|ref|YP_003401224.1|	-	0.0014	18.7	8.2	0.0014	18.7	8.2	2.3	2	1	1	3	3	3	1	bZIP	transcription	factor
NRBF2	PF08961.10	gi|284162601|ref|YP_003401224.1|	-	0.0018	17.9	2.8	0.0037	16.9	2.8	1.6	1	0	0	1	1	1	1	Nuclear	receptor-binding	factor	2,	autophagy	regulator
Ax_dynein_light	PF10211.9	gi|284162601|ref|YP_003401224.1|	-	0.0039	17.1	9.9	0.0073	16.3	9.9	1.4	1	0	0	1	1	1	1	Axonemal	dynein	light	chain
Shugoshin_N	PF07558.11	gi|284162601|ref|YP_003401224.1|	-	0.022	14.6	4.1	0.062	13.2	4.1	1.7	1	0	0	1	1	1	0	Shugoshin	N-terminal	coiled-coil	region
TolA_bind_tri	PF16331.5	gi|284162601|ref|YP_003401224.1|	-	0.041	13.9	1.6	0.083	13.0	1.6	1.4	1	0	0	1	1	1	0	TolA	binding	protein	trimerisation
Fungal_TACC	PF12709.7	gi|284162601|ref|YP_003401224.1|	-	0.052	14.0	9.0	0.14	12.6	9.0	1.7	1	0	0	1	1	1	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
YabA	PF06156.13	gi|284162601|ref|YP_003401224.1|	-	0.067	13.8	8.7	0.083	13.5	7.6	1.7	1	1	0	1	1	1	0	Initiation	control	protein	YabA
CBF_beta	PF02312.17	gi|284162601|ref|YP_003401224.1|	-	0.084	12.5	0.8	0.15	11.7	0.8	1.4	1	0	0	1	1	1	0	Core	binding	factor	beta	subunit
Spc24	PF08286.11	gi|284162601|ref|YP_003401224.1|	-	0.089	13.0	6.7	0.2	11.9	6.7	1.6	1	0	0	1	1	1	0	Spc24	subunit	of	Ndc80
PikAIV_N	PF18605.1	gi|284162601|ref|YP_003401224.1|	-	0.11	12.1	4.4	0.3	10.7	4.4	1.8	1	0	0	1	1	1	0	Narbonolide/10-deoxymethynolide	synthase	PikA4	N-terminal	domain
TSC22	PF01166.18	gi|284162601|ref|YP_003401224.1|	-	0.28	11.5	6.2	0.33	11.3	4.6	2.0	1	1	0	1	1	1	0	TSC-22/dip/bun	family
UPF0242	PF06785.11	gi|284162601|ref|YP_003401224.1|	-	0.45	10.6	11.7	0.81	9.8	11.7	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
GrpE	PF01025.19	gi|284162601|ref|YP_003401224.1|	-	1	9.0	12.0	2.1	8.0	12.0	1.4	1	0	0	1	1	1	0	GrpE
AviRa	PF11599.8	gi|284162601|ref|YP_003401224.1|	-	1.6	8.2	4.0	1.7	8.1	2.7	1.6	2	0	0	2	2	2	0	RRNA	methyltransferase	AviRa
Herpes_BLRF2	PF05812.12	gi|284162601|ref|YP_003401224.1|	-	2	8.6	8.7	4.3	7.5	8.7	1.6	1	0	0	1	1	1	0	Herpesvirus	BLRF2	protein
Phage_Mu_F	PF04233.14	gi|284162603|ref|YP_003401226.1|	-	9.7e-21	74.6	1.2	9.7e-21	74.6	1.2	2.2	3	0	0	3	3	3	1	Phage	Mu	protein	F	like	protein
FliG_M	PF14841.6	gi|284162603|ref|YP_003401226.1|	-	0.012	15.9	0.5	0.012	15.9	0.5	3.0	3	1	0	3	3	3	0	FliG	middle	domain
DUF3322	PF11795.8	gi|284162603|ref|YP_003401226.1|	-	0.27	11.2	6.7	1.7	8.6	0.4	2.6	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	N-term	(DUF3322)
RNase_HII	PF01351.18	gi|284162603|ref|YP_003401226.1|	-	0.55	10.0	10.0	0.37	10.6	0.5	2.8	3	0	0	3	3	3	0	Ribonuclease	HII
DUF5071	PF16804.5	gi|284162603|ref|YP_003401226.1|	-	1.3	9.3	5.3	15	5.9	0.2	3.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF5071)
BET	PF17035.5	gi|284162603|ref|YP_003401226.1|	-	2.9	8.1	6.9	89	3.4	0.2	4.4	3	1	1	4	4	4	0	Bromodomain	extra-terminal	-	transcription	regulation
Phage_portal	PF04860.12	gi|284162604|ref|YP_003401227.1|	-	1.1e-19	70.8	0.5	1.4e-19	70.4	0.5	1.1	1	0	0	1	1	1	1	Phage	portal	protein
UPF0175	PF03683.13	gi|284162604|ref|YP_003401227.1|	-	0.00099	18.8	2.3	0.069	12.9	0.0	3.4	2	1	1	3	3	3	1	Uncharacterised	protein	family	(UPF0175)
TPD52	PF04201.15	gi|284162604|ref|YP_003401227.1|	-	0.049	13.3	0.1	8.4	6.0	0.0	2.4	2	0	0	2	2	2	0	Tumour	protein	D52	family
UbiA	PF01040.18	gi|284162605|ref|YP_003401228.1|	-	0.031	13.6	5.1	0.035	13.4	5.1	1.0	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
HlyIII	PF03006.20	gi|284162605|ref|YP_003401228.1|	-	0.064	13.0	7.1	0.51	10.0	7.2	1.9	1	1	0	1	1	1	0	Haemolysin-III	related
DUF4407	PF14362.6	gi|284162605|ref|YP_003401228.1|	-	0.17	11.2	0.2	0.27	10.6	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF2070	PF09843.9	gi|284162605|ref|YP_003401228.1|	-	1.3	7.3	7.0	1.5	7.0	7.0	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DUF3493	PF11998.8	gi|284162605|ref|YP_003401228.1|	-	2.2	8.5	5.8	0.71	10.1	0.4	2.1	2	0	0	2	2	2	0	Low	psii	accumulation1	/	Rep27
RseC_MucC	PF04246.12	gi|284162605|ref|YP_003401228.1|	-	4.4	7.3	7.0	1.3	8.9	3.3	1.8	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
zf-ribbon_3	PF13248.6	gi|284162606|ref|YP_003401229.1|	-	0.095	12.1	0.1	0.14	11.6	0.1	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Terminase_6C	PF17289.2	gi|284162607|ref|YP_003401230.1|	-	1.1e-15	58.1	0.0	1.6e-15	57.5	0.0	1.3	1	0	0	1	1	1	1	Terminase	RNaseH-like	domain
Terminase_6	PF03237.15	gi|284162607|ref|YP_003401230.1|	-	4.6e-11	42.8	0.0	7e-11	42.2	0.0	1.3	1	0	0	1	1	1	1	Terminase-like	family
Terminase_1	PF03354.15	gi|284162607|ref|YP_003401230.1|	-	1.9e-05	23.4	0.0	0.00023	19.9	0.0	2.0	2	0	0	2	2	2	1	Phage	Terminase
Helicase_RecD	PF05127.14	gi|284162607|ref|YP_003401230.1|	-	0.022	14.6	0.0	0.052	13.4	0.0	1.6	1	0	0	1	1	1	0	Helicase
ATPase	PF06745.13	gi|284162607|ref|YP_003401230.1|	-	0.026	13.9	0.0	0.23	10.8	0.0	2.1	1	1	0	1	1	1	0	KaiC
CHASE9	PF17153.4	gi|284162608|ref|YP_003401231.1|	-	0.014	15.5	0.3	0.027	14.6	0.3	1.5	1	0	0	1	1	1	0	Periplasmic	sensor	domain,	extracellular
Kdo_hydroxy	PF11004.8	gi|284162608|ref|YP_003401231.1|	-	0.024	13.9	0.0	0.04	13.2	0.0	1.4	1	1	0	1	1	1	0	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
DUF3834	PF12916.7	gi|284162608|ref|YP_003401231.1|	-	0.059	12.6	0.1	0.091	12.0	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3834)
TelA	PF05816.11	gi|284162608|ref|YP_003401231.1|	-	0.061	12.4	0.0	0.083	11.9	0.0	1.2	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
DUF3523	PF12037.8	gi|284162609|ref|YP_003401232.1|	-	0.035	13.5	0.1	0.037	13.4	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3523)
IF2_N	PF04760.15	gi|284162609|ref|YP_003401232.1|	-	0.038	13.8	0.1	0.077	12.8	0.1	1.5	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
CENP-K	PF11802.8	gi|284162610|ref|YP_003401233.1|	-	0.0058	16.2	9.0	0.0076	15.8	9.0	1.2	1	0	0	1	1	1	1	Centromere-associated	protein	K
HALZ	PF02183.18	gi|284162610|ref|YP_003401233.1|	-	0.0065	16.7	4.4	0.016	15.4	4.4	1.7	1	0	0	1	1	1	1	Homeobox	associated	leucine	zipper
DUF1338	PF07063.13	gi|284162610|ref|YP_003401233.1|	-	0.017	14.3	0.8	0.025	13.8	0.8	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1338)
DUF3440	PF11922.8	gi|284162610|ref|YP_003401233.1|	-	0.2	11.4	1.9	0.33	10.6	1.9	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3440)
DivIC	PF04977.15	gi|284162610|ref|YP_003401233.1|	-	0.58	10.0	10.4	0.086	12.6	5.5	2.0	1	1	1	2	2	2	0	Septum	formation	initiator
MRPL52	PF18699.1	gi|284162610|ref|YP_003401233.1|	-	4.1	7.7	9.0	4.1	7.7	7.7	1.7	1	1	0	1	1	1	0	Mitoribosomal	protein	mL52
zf-FPG_IleRS	PF06827.14	gi|284162611|ref|YP_003401234.1|	-	0.011	15.6	3.9	0.024	14.5	0.6	2.1	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-TFIIB	PF13453.6	gi|284162611|ref|YP_003401234.1|	-	0.014	14.7	0.8	0.018	14.4	0.8	1.2	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Zn-ribbon_8	PF09723.10	gi|284162612|ref|YP_003401235.1|	-	0.00013	22.0	0.8	0.00024	21.1	0.8	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
zf-C2H2	PF00096.26	gi|284162612|ref|YP_003401235.1|	-	0.00019	21.7	3.6	0.034	14.6	0.7	2.4	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-Di19	PF05605.12	gi|284162612|ref|YP_003401235.1|	-	0.001	19.3	4.7	0.0019	18.4	4.7	1.4	1	0	0	1	1	1	1	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_4	PF13894.6	gi|284162612|ref|YP_003401235.1|	-	0.0013	19.4	5.9	0.033	15.0	0.8	2.5	2	0	0	2	2	2	1	C2H2-type	zinc	finger
zinc-ribbons_6	PF07191.12	gi|284162612|ref|YP_003401235.1|	-	0.0022	18.0	3.8	0.061	13.3	3.8	2.1	1	1	0	1	1	1	1	zinc-ribbons
zf_UBZ	PF18439.1	gi|284162612|ref|YP_003401235.1|	-	0.029	13.9	3.7	1.6	8.4	0.2	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
Zn_ribbon_SprT	PF17283.2	gi|284162612|ref|YP_003401235.1|	-	0.035	14.0	0.3	0.078	12.9	0.3	1.6	1	1	0	1	1	1	0	SprT-like	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|284162612|ref|YP_003401235.1|	-	0.18	11.2	6.8	0.56	9.7	0.5	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.7	gi|284162612|ref|YP_003401235.1|	-	0.19	11.8	4.6	0.54	10.3	4.6	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-P11	PF03854.14	gi|284162612|ref|YP_003401235.1|	-	0.2	11.4	4.7	0.22	11.2	2.0	2.3	1	1	0	1	1	1	0	P-11	zinc	finger
zf-H2C2_2	PF13465.6	gi|284162612|ref|YP_003401235.1|	-	1.2	9.7	4.9	2.2	8.8	0.7	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
YacG	PF03884.14	gi|284162612|ref|YP_003401235.1|	-	1.2	8.9	4.7	5.9	6.7	1.0	2.5	2	1	0	2	2	2	0	DNA	gyrase	inhibitor	YacG
NADH-G_4Fe-4S_3	PF10588.9	gi|284162612|ref|YP_003401235.1|	-	2	8.0	5.2	12	5.5	0.2	3.0	3	0	0	3	3	3	0	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
TF_Zn_Ribbon	PF08271.12	gi|284162612|ref|YP_003401235.1|	-	2.4	7.7	5.4	14	5.3	5.1	2.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-C2H2_9	PF16293.5	gi|284162612|ref|YP_003401235.1|	-	4.7	7.1	8.6	0.71	9.8	0.4	2.4	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(1	copy)
DUF5390	PF17365.2	gi|284162615|ref|YP_003401238.1|	-	0.14	12.4	0.1	0.38	11.0	0.0	1.7	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5390)
DUF4443	PF14544.6	gi|284162616|ref|YP_003401239.1|	-	0.071	13.3	0.1	0.19	11.9	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4443)
DUF1822	PF08852.11	gi|284162616|ref|YP_003401239.1|	-	0.17	10.9	0.0	0.23	10.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1822)
RNase_H_2	PF13482.6	gi|284162617|ref|YP_003401240.1|	-	2.9e-09	37.1	0.4	3.4e-08	33.7	0.4	2.3	1	1	0	1	1	1	1	RNase_H	superfamily
RNase_T	PF00929.24	gi|284162617|ref|YP_003401240.1|	-	9.7e-06	26.2	0.1	0.001	19.6	0.1	2.3	1	1	0	1	1	1	1	Exonuclease
DNA_pol_B_exo2	PF10108.9	gi|284162617|ref|YP_003401240.1|	-	0.0008	19.1	0.0	0.002	17.8	0.0	1.6	2	0	0	2	2	2	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF3848	PF12959.7	gi|284162617|ref|YP_003401240.1|	-	0.023	14.7	0.0	0.046	13.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3848)
DNA_pol_B_exo1	PF03104.19	gi|284162617|ref|YP_003401240.1|	-	0.058	12.5	0.4	0.2	10.8	0.4	1.7	1	1	0	1	1	1	0	DNA	polymerase	family	B,	exonuclease	domain
Fibritin_C	PF07921.12	gi|284162619|ref|YP_003401242.1|	-	0.092	12.9	0.2	0.15	12.2	0.2	1.3	1	0	0	1	1	1	0	Fibritin	C-terminal	region
UPF0175	PF03683.13	gi|284162620|ref|YP_003401243.1|	-	0.00046	19.8	0.1	0.0014	18.3	0.0	1.8	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0175)
DUF3368	PF11848.8	gi|284162620|ref|YP_003401243.1|	-	0.0013	18.4	0.1	0.1	12.4	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3368)
DUF1697	PF08002.11	gi|284162621|ref|YP_003401244.1|	-	0.15	12.5	0.0	0.23	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1697)
Pox_RNA_Pol_19	PF05320.12	gi|284162622|ref|YP_003401245.1|	-	0.018	15.0	0.0	0.022	14.7	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	DNA-directed	RNA	polymerase	19	kDa	subunit
Msg2_C	PF12373.8	gi|284162622|ref|YP_003401245.1|	-	0.024	14.1	0.2	0.057	12.9	0.1	1.7	2	0	0	2	2	2	0	Major	surface	glycoprotein	2	C	terminal
RHH_1	PF01402.21	gi|284162622|ref|YP_003401245.1|	-	0.05	13.6	0.1	0.069	13.1	0.1	1.3	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
SDH_sah	PF01972.16	gi|284162625|ref|YP_003401248.1|	-	1.9e-19	69.8	0.3	6.9e-19	67.9	0.3	1.7	1	1	0	1	1	1	1	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.23	gi|284162625|ref|YP_003401248.1|	-	0.0042	17.0	0.1	0.011	15.6	0.0	1.7	2	1	0	2	2	2	1	Clp	protease
CcdA	PF07362.12	gi|284162627|ref|YP_003401250.1|	-	5.6e-10	39.5	0.4	6e-10	39.4	0.4	1.0	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RHH_3	PF12651.7	gi|284162627|ref|YP_003401250.1|	-	0.0016	18.4	1.0	0.025	14.5	1.0	2.1	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.21	gi|284162627|ref|YP_003401250.1|	-	0.0065	16.4	0.6	0.069	13.1	0.6	2.0	1	1	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
IKKbetaNEMObind	PF12179.8	gi|284162627|ref|YP_003401250.1|	-	0.038	14.0	0.0	0.053	13.6	0.0	1.2	1	0	0	1	1	1	0	I-kappa-kinase-beta	NEMO	binding	domain
Usp	PF00582.26	gi|284162628|ref|YP_003401251.1|	-	2.4e-27	96.2	4.1	1.1e-18	68.2	0.2	2.2	2	0	0	2	2	2	2	Universal	stress	protein	family
Radical_SAM	PF04055.21	gi|284162629|ref|YP_003401252.1|	-	3e-08	34.2	0.1	5e-08	33.5	0.1	1.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Radical_SAM_C	PF16199.5	gi|284162629|ref|YP_003401252.1|	-	0.11	12.5	0.0	0.25	11.4	0.0	1.6	1	0	0	1	1	1	0	Radical_SAM	C-terminal	domain
Rhomboid	PF01694.22	gi|284162630|ref|YP_003401253.1|	-	5.1e-36	123.9	12.1	5.1e-36	123.9	12.1	1.9	2	0	0	2	2	2	1	Rhomboid	family
DUF1751	PF08551.10	gi|284162630|ref|YP_003401253.1|	-	2.7e-09	37.5	1.3	2.7e-09	37.5	1.3	2.2	3	0	0	3	3	3	1	Eukaryotic	integral	membrane	protein	(DUF1751)
DUF1270	PF06900.11	gi|284162630|ref|YP_003401253.1|	-	6.8	7.1	10.3	0.34	11.3	0.4	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1270)
Biotin_lipoyl	PF00364.22	gi|284162631|ref|YP_003401254.1|	-	1.9e-20	72.4	8.2	1.9e-20	72.4	8.2	2.5	2	1	1	3	3	3	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|284162631|ref|YP_003401254.1|	-	1.1e-13	50.8	10.1	5.3e-07	29.4	2.1	2.8	2	1	2	4	4	4	2	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|284162631|ref|YP_003401254.1|	-	2.6e-07	31.3	1.2	0.0074	17.0	0.4	2.4	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|284162631|ref|YP_003401254.1|	-	1.8e-06	27.4	1.5	0.013	14.8	0.1	2.2	1	1	1	2	2	2	2	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
DUF2118	PF09891.9	gi|284162631|ref|YP_003401254.1|	-	1.6e-05	24.9	5.1	0.00069	19.6	2.8	2.2	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
QRPTase_N	PF02749.16	gi|284162631|ref|YP_003401254.1|	-	0.00011	22.2	0.9	0.034	14.2	0.1	2.6	2	1	1	3	3	3	2	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
RnfC_N	PF13375.6	gi|284162631|ref|YP_003401254.1|	-	0.00057	19.8	3.9	0.0028	17.6	1.9	2.3	1	1	1	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PYNP_C	PF07831.13	gi|284162631|ref|YP_003401254.1|	-	0.0052	16.4	0.9	3.2	7.5	0.1	2.7	1	1	0	2	2	2	2	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Peptidase_M23	PF01551.22	gi|284162631|ref|YP_003401254.1|	-	0.0079	16.4	3.3	0.045	14.0	3.3	3.0	1	1	0	1	1	1	1	Peptidase	family	M23
PTS_EIIA_1	PF00358.20	gi|284162631|ref|YP_003401254.1|	-	0.0085	15.8	0.8	0.25	11.1	0.1	2.7	1	1	1	2	2	2	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
GCV_H	PF01597.19	gi|284162631|ref|YP_003401254.1|	-	0.028	14.3	3.1	0.04	13.8	3.1	1.4	1	0	0	1	1	1	0	Glycine	cleavage	H-protein
NQRA	PF05896.11	gi|284162631|ref|YP_003401254.1|	-	0.03	13.7	4.9	0.081	12.3	4.7	1.8	1	1	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
PASTA	PF03793.19	gi|284162631|ref|YP_003401254.1|	-	0.13	12.2	3.6	0.34	10.8	0.5	2.4	1	1	1	2	2	2	0	PASTA	domain
Peptidase_S24	PF00717.23	gi|284162631|ref|YP_003401254.1|	-	0.61	10.1	4.9	2.4	8.2	1.2	2.8	2	1	0	2	2	2	0	Peptidase	S24-like
GHMP_kinases_N	PF00288.26	gi|284162633|ref|YP_003401256.1|	-	1e-06	28.8	0.6	1.9e-06	28.0	0.6	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
TIP49	PF06068.13	gi|284162634|ref|YP_003401257.1|	-	0.02	14.1	2.6	0.024	13.9	2.6	1.1	1	0	0	1	1	1	0	TIP49	P-loop	domain
NAD_kinase	PF01513.21	gi|284162635|ref|YP_003401258.1|	-	1.3e-43	149.3	0.0	1.5e-43	149.1	0.0	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|284162635|ref|YP_003401258.1|	-	4.5e-05	23.1	0.0	9.5e-05	22.0	0.0	1.5	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
SNO	PF01174.19	gi|284162635|ref|YP_003401258.1|	-	0.07	13.0	0.0	0.12	12.2	0.0	1.3	1	0	0	1	1	1	0	SNO	glutamine	amidotransferase	family
UPF0180	PF03698.13	gi|284162635|ref|YP_003401258.1|	-	0.097	12.9	0.0	0.24	11.6	0.0	1.7	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0180)
Inositol_P	PF00459.25	gi|284162636|ref|YP_003401259.1|	-	1.8e-21	76.9	0.0	1.8e-19	70.3	0.0	2.0	1	1	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.20	gi|284162636|ref|YP_003401259.1|	-	0.0068	15.9	0.1	0.012	15.2	0.1	1.3	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
UPF0147	PF03685.13	gi|284162637|ref|YP_003401260.1|	-	1.1e-32	111.9	2.0	1.2e-32	111.8	2.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.12	gi|284162637|ref|YP_003401260.1|	-	3.4e-05	24.1	0.2	0.011	16.0	0.1	2.2	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
Auto_anti-p27	PF06677.12	gi|284162638|ref|YP_003401261.1|	-	3.8e-07	30.1	2.5	6e-07	29.5	2.5	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TackOD1	PF18551.1	gi|284162638|ref|YP_003401261.1|	-	0.0072	16.0	4.3	0.015	15.0	0.3	2.2	2	0	0	2	2	2	1	Thaumarchaeal	output	domain	1
DUF3130	PF11328.8	gi|284162638|ref|YP_003401261.1|	-	0.032	14.5	0.2	0.05	13.9	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3130
DZR	PF12773.7	gi|284162638|ref|YP_003401261.1|	-	0.047	13.7	0.4	0.087	12.9	0.4	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
TRM	PF02005.16	gi|284162638|ref|YP_003401261.1|	-	0.058	12.6	1.0	0.062	12.5	1.0	1.0	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Prok-RING_1	PF14446.6	gi|284162638|ref|YP_003401261.1|	-	0.083	12.8	0.8	0.18	11.8	0.8	1.5	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-RING_4	PF14570.6	gi|284162638|ref|YP_003401261.1|	-	0.086	12.7	2.5	0.16	11.8	2.5	1.5	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
Trm112p	PF03966.16	gi|284162638|ref|YP_003401261.1|	-	0.091	13.3	1.1	0.53	10.9	0.3	2.3	2	0	0	2	2	2	0	Trm112p-like	protein
zinc-ribbons_6	PF07191.12	gi|284162638|ref|YP_003401261.1|	-	0.13	12.3	1.7	0.16	12.0	0.6	1.7	2	0	0	2	2	2	0	zinc-ribbons
T2SSE	PF00437.20	gi|284162639|ref|YP_003401262.1|	-	7e-08	31.9	1.0	7e-08	31.9	1.0	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.29	gi|284162639|ref|YP_003401262.1|	-	1.7e-05	24.6	2.9	0.00016	21.4	0.1	3.1	2	1	0	2	2	2	1	KH	domain
IstB_IS21	PF01695.17	gi|284162639|ref|YP_003401262.1|	-	0.00029	20.6	0.0	0.00065	19.5	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
NTPase_1	PF03266.15	gi|284162639|ref|YP_003401262.1|	-	0.0009	19.2	0.0	0.011	15.7	0.0	2.8	2	0	0	2	2	2	1	NTPase
AAA_22	PF13401.6	gi|284162639|ref|YP_003401262.1|	-	0.00092	19.5	0.0	0.18	12.1	0.0	3.2	3	0	0	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|284162639|ref|YP_003401262.1|	-	0.0012	19.2	0.0	0.014	15.8	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
KH_2	PF07650.17	gi|284162639|ref|YP_003401262.1|	-	0.0015	18.3	1.4	0.0015	18.3	1.4	3.6	3	0	0	3	3	3	1	KH	domain
AAA	PF00004.29	gi|284162639|ref|YP_003401262.1|	-	0.0024	18.3	0.7	0.017	15.5	0.0	2.6	3	0	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|284162639|ref|YP_003401262.1|	-	0.0025	18.4	0.0	0.011	16.3	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|284162639|ref|YP_003401262.1|	-	0.0091	15.7	0.0	0.12	12.0	0.0	2.8	1	1	1	2	2	2	1	Thymidylate	kinase
Zeta_toxin	PF06414.12	gi|284162639|ref|YP_003401262.1|	-	0.011	15.1	0.1	0.032	13.5	0.0	1.8	2	0	0	2	2	1	0	Zeta	toxin
RuvB_N	PF05496.12	gi|284162639|ref|YP_003401262.1|	-	0.011	15.5	0.3	0.094	12.5	0.0	2.6	3	0	0	3	3	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_25	PF13481.6	gi|284162639|ref|YP_003401262.1|	-	0.019	14.6	0.1	0.059	12.9	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|284162639|ref|YP_003401262.1|	-	0.021	14.6	0.2	0.062	13.0	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
AAA_29	PF13555.6	gi|284162639|ref|YP_003401262.1|	-	0.024	14.4	0.0	0.064	13.0	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.6	gi|284162639|ref|YP_003401262.1|	-	0.027	14.7	0.0	0.074	13.2	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
DnaB_C	PF03796.15	gi|284162639|ref|YP_003401262.1|	-	0.03	13.7	0.8	0.27	10.5	0.0	2.5	3	0	0	3	3	2	0	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.22	gi|284162639|ref|YP_003401262.1|	-	0.03	14.7	0.0	0.12	12.8	0.0	2.0	1	0	0	1	1	1	0	RNA	helicase
ABC_tran	PF00005.27	gi|284162639|ref|YP_003401262.1|	-	0.031	14.8	0.0	0.089	13.3	0.0	1.8	1	0	0	1	1	1	0	ABC	transporter
AAA_5	PF07728.14	gi|284162639|ref|YP_003401262.1|	-	0.034	14.2	0.1	0.24	11.4	0.0	2.4	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|284162639|ref|YP_003401262.1|	-	0.035	13.8	0.0	0.31	10.7	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|284162639|ref|YP_003401262.1|	-	0.035	13.5	0.6	0.42	10.0	0.0	2.5	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
ATP_bind_1	PF03029.17	gi|284162639|ref|YP_003401262.1|	-	0.036	13.9	0.0	0.081	12.7	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
APS_kinase	PF01583.20	gi|284162639|ref|YP_003401262.1|	-	0.039	13.8	0.0	0.14	12.0	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
KH_5	PF13184.6	gi|284162639|ref|YP_003401262.1|	-	0.04	14.0	0.2	0.04	14.0	0.2	2.5	3	0	0	3	3	1	0	NusA-like	KH	domain
AAA_11	PF13086.6	gi|284162639|ref|YP_003401262.1|	-	0.043	13.6	0.0	0.087	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
GlutR_N	PF05201.15	gi|284162639|ref|YP_003401262.1|	-	0.057	13.2	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
MeaB	PF03308.16	gi|284162639|ref|YP_003401262.1|	-	0.06	12.3	0.0	0.16	10.9	0.0	1.7	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
KTI12	PF08433.10	gi|284162639|ref|YP_003401262.1|	-	0.06	12.8	0.1	0.38	10.1	0.0	2.3	3	0	0	3	3	3	0	Chromatin	associated	protein	KTI12
PPV_E1_C	PF00519.17	gi|284162639|ref|YP_003401262.1|	-	0.077	11.8	0.0	0.11	11.3	0.0	1.1	1	0	0	1	1	1	0	Papillomavirus	helicase
DUF5615	PF18480.1	gi|284162639|ref|YP_003401262.1|	-	0.11	12.3	0.0	0.77	9.6	0.0	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF5615)
AAA_7	PF12775.7	gi|284162639|ref|YP_003401262.1|	-	0.15	11.6	0.0	0.28	10.7	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
KH_4	PF13083.6	gi|284162639|ref|YP_003401262.1|	-	0.25	11.2	0.1	0.25	11.2	0.1	3.6	4	0	0	4	4	4	0	KH	domain
AAA_23	PF13476.6	gi|284162639|ref|YP_003401262.1|	-	0.32	11.5	2.2	10	6.6	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
ATP-synt_F	PF01990.17	gi|284162639|ref|YP_003401262.1|	-	0.96	9.8	7.7	1.6	9.1	0.1	4.2	3	1	1	4	4	4	0	ATP	synthase	(F/14-kDa)	subunit
SPP	PF06550.11	gi|284162640|ref|YP_003401263.1|	-	5.2e-55	186.9	29.8	2.4e-35	122.4	18.3	2.1	1	1	1	2	2	2	2	Signal-peptide	peptidase,	presenilin	aspartyl	protease
Peptidase_A22B	PF04258.13	gi|284162640|ref|YP_003401263.1|	-	6.8e-07	29.1	17.9	9e-07	28.7	17.9	1.3	1	0	0	1	1	1	1	Signal	peptide	peptidase
ApoO	PF09769.9	gi|284162640|ref|YP_003401263.1|	-	0.029	14.3	0.7	0.053	13.5	0.7	1.4	1	0	0	1	1	1	0	Apolipoprotein	O
PDT	PF00800.18	gi|284162642|ref|YP_003401265.1|	-	4.8e-55	186.2	0.0	7.7e-55	185.5	0.0	1.3	1	0	0	1	1	1	1	Prephenate	dehydratase
PDH	PF02153.17	gi|284162642|ref|YP_003401265.1|	-	1.3e-26	93.1	0.1	3.3e-26	91.9	0.1	1.6	1	1	0	1	1	1	1	Prephenate	dehydrogenase
CM_2	PF01817.21	gi|284162642|ref|YP_003401265.1|	-	4.3e-10	39.8	1.8	4.3e-10	39.8	1.8	2.6	3	0	0	3	3	3	1	Chorismate	mutase	type	II
ACT	PF01842.25	gi|284162642|ref|YP_003401265.1|	-	5e-10	39.0	0.0	4.4e-09	35.9	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
F420_oxidored	PF03807.17	gi|284162642|ref|YP_003401265.1|	-	0.001	19.6	0.1	0.0045	17.5	0.1	2.1	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|284162642|ref|YP_003401265.1|	-	0.0073	16.0	0.9	0.052	13.2	0.0	2.2	1	1	1	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_2	PF03446.15	gi|284162642|ref|YP_003401265.1|	-	0.012	15.7	0.1	0.23	11.6	0.1	2.9	2	1	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ACT_4	PF13291.6	gi|284162642|ref|YP_003401265.1|	-	0.031	14.9	0.0	0.11	13.1	0.0	1.9	1	0	0	1	1	1	0	ACT	domain
DUF3834	PF12916.7	gi|284162642|ref|YP_003401265.1|	-	0.036	13.3	0.0	0.16	11.2	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3834)
PRK	PF00485.18	gi|284162643|ref|YP_003401266.1|	-	8e-46	156.3	0.2	1.8e-45	155.1	0.2	1.6	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_18	PF13238.6	gi|284162643|ref|YP_003401266.1|	-	0.002	18.7	0.0	0.0042	17.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|284162643|ref|YP_003401266.1|	-	0.003	16.8	0.0	0.0046	16.2	0.0	1.3	1	0	0	1	1	1	1	TIP49	P-loop	domain
Zeta_toxin	PF06414.12	gi|284162643|ref|YP_003401266.1|	-	0.0033	16.7	0.0	0.0058	15.9	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
ABC_tran	PF00005.27	gi|284162643|ref|YP_003401266.1|	-	0.0087	16.6	0.0	0.013	16.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
G-alpha	PF00503.20	gi|284162643|ref|YP_003401266.1|	-	0.012	14.8	0.6	0.11	11.7	0.4	2.2	1	1	0	1	1	1	0	G-protein	alpha	subunit
NB-ARC	PF00931.22	gi|284162643|ref|YP_003401266.1|	-	0.016	14.4	0.3	0.025	13.8	0.3	1.3	1	0	0	1	1	1	0	NB-ARC	domain
TsaE	PF02367.17	gi|284162643|ref|YP_003401266.1|	-	0.023	14.7	0.1	0.042	13.8	0.1	1.6	1	1	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
APS_kinase	PF01583.20	gi|284162643|ref|YP_003401266.1|	-	0.044	13.7	0.0	0.079	12.8	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_24	PF13479.6	gi|284162643|ref|YP_003401266.1|	-	0.094	12.4	0.1	0.21	11.3	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
T2SSE	PF00437.20	gi|284162643|ref|YP_003401266.1|	-	0.1	11.6	0.1	0.57	9.2	0.0	2.0	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.12	gi|284162643|ref|YP_003401266.1|	-	0.13	12.2	0.1	0.22	11.4	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_33	PF13671.6	gi|284162643|ref|YP_003401266.1|	-	0.22	11.7	0.0	0.36	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|284162643|ref|YP_003401266.1|	-	0.45	11.0	4.9	0.95	9.9	4.7	1.9	1	1	0	1	1	1	0	AAA	domain
HycI	PF01750.18	gi|284162644|ref|YP_003401267.1|	-	1e-14	54.5	1.3	1.4e-14	54.0	1.4	1.3	1	1	0	1	1	1	1	Hydrogenase	maturation	protease
HTH_CodY	PF08222.11	gi|284162644|ref|YP_003401267.1|	-	0.045	13.3	0.1	0.092	12.3	0.1	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Ribosomal_S5	PF00333.20	gi|284162644|ref|YP_003401267.1|	-	0.072	13.1	0.1	0.24	11.4	0.0	1.9	2	0	0	2	2	2	0	Ribosomal	protein	S5,	N-terminal	domain
DUF2250	PF10007.9	gi|284162645|ref|YP_003401268.1|	-	1.8e-30	104.9	1.9	2.5e-30	104.4	1.9	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.6	gi|284162645|ref|YP_003401268.1|	-	0.00098	18.9	0.1	0.0015	18.2	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
TrmB	PF01978.19	gi|284162645|ref|YP_003401268.1|	-	0.0041	17.0	0.2	0.015	15.1	0.1	1.9	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|284162645|ref|YP_003401268.1|	-	0.0048	16.8	0.0	0.0089	15.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.20	gi|284162645|ref|YP_003401268.1|	-	0.0056	17.0	0.1	0.0087	16.4	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_9	PF08221.11	gi|284162645|ref|YP_003401268.1|	-	0.0082	16.2	0.2	0.016	15.3	0.2	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
GntR	PF00392.21	gi|284162645|ref|YP_003401268.1|	-	0.023	14.4	0.1	0.052	13.2	0.0	1.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
MarR	PF01047.22	gi|284162645|ref|YP_003401268.1|	-	0.023	14.6	1.2	0.023	14.6	0.1	1.6	2	0	0	2	2	2	0	MarR	family
NiFeSe_Hases	PF00374.19	gi|284162646|ref|YP_003401269.1|	-	2.2e-30	106.0	0.4	5.6e-15	55.2	0.0	3.1	2	1	0	3	3	3	3	Nickel-dependent	hydrogenase
DUF4755	PF15947.5	gi|284162646|ref|YP_003401269.1|	-	0.021	14.8	0.6	0.035	14.1	0.1	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4755)
DUF2989	PF11207.8	gi|284162646|ref|YP_003401269.1|	-	0.13	12.1	0.0	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2989)
Oxidored_q6	PF01058.22	gi|284162647|ref|YP_003401270.1|	-	5e-30	104.0	0.1	1.2e-29	102.8	0.1	1.6	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NiFe_hyd_SSU_C	PF14720.6	gi|284162647|ref|YP_003401270.1|	-	5.7	7.4	7.4	32	5.0	7.4	2.3	1	1	0	1	1	1	0	NiFe/NiFeSe	hydrogenase	small	subunit	C-terminal
FlpD	PF02662.16	gi|284162648|ref|YP_003401271.1|	-	7.6e-54	180.9	0.0	8.5e-54	180.8	0.0	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
CCG	PF02754.16	gi|284162649|ref|YP_003401272.1|	-	6.8e-33	112.7	1.0	7.4e-20	71.0	0.1	2.5	3	0	0	3	3	3	2	Cysteine-rich	domain
HydF_tetramer	PF18133.1	gi|284162649|ref|YP_003401272.1|	-	0.065	13.0	0.4	0.88	9.3	0.0	2.7	3	0	0	3	3	3	0	Hydrogen	maturase	F	tetramerization	domain
Fer4_8	PF13183.6	gi|284162650|ref|YP_003401273.1|	-	2.1e-09	37.7	5.2	4.1e-09	36.7	5.1	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162650|ref|YP_003401273.1|	-	6.9e-09	36.1	4.0	1.1e-08	35.5	4.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162650|ref|YP_003401273.1|	-	8.4e-08	33.0	1.0	0.018	15.9	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|284162650|ref|YP_003401273.1|	-	1.4e-06	28.3	10.6	3.2e-05	24.0	11.7	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162650|ref|YP_003401273.1|	-	3.9e-06	26.9	9.0	0.0027	18.1	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162650|ref|YP_003401273.1|	-	3e-05	24.5	12.1	0.00068	20.2	13.3	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162650|ref|YP_003401273.1|	-	5.4e-05	22.8	16.3	0.0076	16.0	3.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162650|ref|YP_003401273.1|	-	5.8e-05	23.1	13.1	0.00042	20.4	13.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162650|ref|YP_003401273.1|	-	0.00019	21.5	7.5	0.042	14.0	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162650|ref|YP_003401273.1|	-	0.00062	19.7	13.9	0.096	12.8	3.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162650|ref|YP_003401273.1|	-	0.0032	17.5	17.0	0.15	12.2	4.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|284162650|ref|YP_003401273.1|	-	0.039	14.2	7.7	0.99	9.6	0.4	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284162650|ref|YP_003401273.1|	-	0.14	13.0	13.4	0.8	10.6	2.5	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162650|ref|YP_003401273.1|	-	0.14	13.1	16.9	1.1	10.3	4.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284162650|ref|YP_003401273.1|	-	7.6	7.2	16.8	14	6.3	4.6	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4	PF00037.27	gi|284162651|ref|YP_003401274.1|	-	2.3e-23	81.0	42.1	2.6e-08	33.3	3.4	6.0	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162651|ref|YP_003401274.1|	-	8.8e-20	71.0	29.3	1.3e-10	41.7	11.3	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Pyr_redox_2	PF07992.14	gi|284162651|ref|YP_003401274.1|	-	1.2e-16	60.8	0.0	1.3e-10	41.0	0.1	2.8	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_9	PF13187.6	gi|284162651|ref|YP_003401274.1|	-	1.8e-14	53.6	18.7	1.2e-08	35.0	10.0	3.8	4	1	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162651|ref|YP_003401274.1|	-	1.5e-13	50.2	52.2	1.6e-05	24.7	2.4	6.6	7	0	0	7	7	6	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284162651|ref|YP_003401274.1|	-	9.4e-11	42.5	26.9	0.0015	19.4	0.7	5.5	6	0	0	6	6	4	3	4Fe-4S	double	cluster	binding	domain
FAD_oxidored	PF12831.7	gi|284162651|ref|YP_003401274.1|	-	1.9e-09	37.4	0.0	3.3e-09	36.6	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer4_2	PF12797.7	gi|284162651|ref|YP_003401274.1|	-	2e-09	37.0	52.1	2.4e-05	24.2	3.4	6.3	6	1	0	6	6	5	3	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162651|ref|YP_003401274.1|	-	2.4e-09	37.2	27.0	3e-06	27.3	10.8	6.5	7	1	1	8	8	7	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284162651|ref|YP_003401274.1|	-	1.3e-08	34.8	38.4	4e-05	23.7	12.5	5.5	4	3	1	5	5	4	3	4Fe-4S	dicluster	domain
DAO	PF01266.24	gi|284162651|ref|YP_003401274.1|	-	4.7e-08	33.0	0.2	1.6e-05	24.7	0.3	2.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Fer4_4	PF12800.7	gi|284162651|ref|YP_003401274.1|	-	9.7e-08	32.0	36.0	0.00078	19.8	1.6	5.5	5	1	0	5	5	4	3	4Fe-4S	binding	domain
HI0933_like	PF03486.14	gi|284162651|ref|YP_003401274.1|	-	1.6e-07	30.4	0.6	1.1e-05	24.4	0.5	2.2	1	1	1	2	2	2	1	HI0933-like	protein
Fer4_15	PF13459.6	gi|284162651|ref|YP_003401274.1|	-	2.1e-07	31.5	18.0	0.0051	17.5	0.7	4.4	4	0	0	4	4	4	3	4Fe-4S	single	cluster	domain
FAD_binding_2	PF00890.24	gi|284162651|ref|YP_003401274.1|	-	5.1e-07	29.1	0.4	8.1e-07	28.5	0.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|284162651|ref|YP_003401274.1|	-	5.1e-07	29.8	0.0	1.4e-06	28.5	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|284162651|ref|YP_003401274.1|	-	2.6e-06	27.9	1.2	3.5e-05	24.3	1.2	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_17	PF13534.6	gi|284162651|ref|YP_003401274.1|	-	3.7e-06	27.4	32.2	0.0081	16.7	10.8	5.9	5	2	2	7	7	6	4	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284162651|ref|YP_003401274.1|	-	3.9e-06	27.6	15.8	0.13	13.1	0.5	4.6	3	1	1	4	4	3	3	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|284162651|ref|YP_003401274.1|	-	1.1e-05	24.8	0.1	2.2e-05	23.7	0.1	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|284162651|ref|YP_003401274.1|	-	7.7e-05	22.1	0.0	0.0002	20.7	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|284162651|ref|YP_003401274.1|	-	0.0014	18.0	0.4	0.0033	16.7	0.3	1.6	1	1	0	1	1	1	1	Thi4	family
Fer4_8	PF13183.6	gi|284162651|ref|YP_003401274.1|	-	0.0024	18.3	1.2	0.0024	18.3	1.2	5.5	4	2	1	5	5	4	2	4Fe-4S	dicluster	domain
AlaDh_PNT_C	PF01262.21	gi|284162651|ref|YP_003401274.1|	-	0.0024	17.2	0.0	0.0054	16.1	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.19	gi|284162651|ref|YP_003401274.1|	-	0.011	15.0	0.3	0.024	13.9	0.3	1.5	1	0	0	1	1	1	0	FAD	binding	domain
Fer4_3	PF12798.7	gi|284162651|ref|YP_003401274.1|	-	0.017	16.0	6.8	0.017	16.0	6.8	6.5	7	0	0	7	7	5	0	4Fe-4S	binding	domain
Amino_oxidase	PF01593.24	gi|284162651|ref|YP_003401274.1|	-	0.075	12.3	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.12	gi|284162651|ref|YP_003401274.1|	-	0.12	11.4	0.0	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|284162651|ref|YP_003401274.1|	-	0.22	10.3	0.4	0.41	9.4	0.4	1.4	1	0	0	1	1	1	0	Tryptophan	halogenase
Fer4_13	PF13370.6	gi|284162651|ref|YP_003401274.1|	-	0.32	11.6	30.9	0.081	13.5	1.6	4.5	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284162651|ref|YP_003401274.1|	-	1.4	9.1	15.0	6.6	7.0	0.2	4.3	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
tRNA_int_endo	PF01974.17	gi|284162652|ref|YP_003401275.1|	-	1.3e-28	98.9	6.2	1.5e-24	85.9	0.9	3.3	3	0	0	3	3	3	2	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|284162652|ref|YP_003401275.1|	-	3.3e-14	52.3	2.4	6.3e-10	38.6	0.5	2.7	2	0	0	2	2	2	2	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.7	gi|284162652|ref|YP_003401275.1|	-	5.1e-05	23.4	0.2	0.034	14.3	0.0	2.6	2	1	0	2	2	2	2	tRNA-splicing	endonuclease	subunit	sen54	N-term
DUF4364	PF14277.6	gi|284162653|ref|YP_003401276.1|	-	0.0029	17.4	0.4	0.0056	16.4	0.3	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Rrf2	PF02082.20	gi|284162653|ref|YP_003401276.1|	-	0.012	15.9	0.0	0.023	15.0	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
DUF2250	PF10007.9	gi|284162653|ref|YP_003401276.1|	-	0.028	14.5	0.4	0.069	13.3	0.1	1.8	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.19	gi|284162653|ref|YP_003401276.1|	-	0.051	13.5	1.1	0.4	10.6	0.2	2.4	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DNA_pol3_delta2	PF13177.6	gi|284162653|ref|YP_003401276.1|	-	2.1	8.1	5.5	8.8	6.1	0.3	2.1	1	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
Peptidase_M20	PF01546.28	gi|284162654|ref|YP_003401277.1|	-	2.7e-31	108.9	0.0	3.5e-31	108.5	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|284162654|ref|YP_003401277.1|	-	3e-13	49.6	0.0	6e-13	48.7	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|284162654|ref|YP_003401277.1|	-	0.036	13.8	0.0	0.057	13.1	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M28
LigT_PEase	PF02834.16	gi|284162655|ref|YP_003401278.1|	-	3.9e-31	107.1	0.1	1.4e-17	63.7	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
AKAP7_NLS	PF10469.9	gi|284162655|ref|YP_003401278.1|	-	2.5e-15	57.0	0.0	3.1e-15	56.6	0.0	1.1	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
2_5_RNA_ligase2	PF13563.6	gi|284162655|ref|YP_003401278.1|	-	8.4e-14	51.7	0.0	1e-13	51.4	0.0	1.2	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
DUF4065	PF13274.6	gi|284162655|ref|YP_003401278.1|	-	0.0076	17.1	0.3	1.7	9.5	0.0	2.4	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF4065)
HVSL	PF09749.9	gi|284162655|ref|YP_003401278.1|	-	0.011	15.3	0.0	0.014	14.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
Turandot	PF07240.11	gi|284162655|ref|YP_003401278.1|	-	0.099	12.6	0.1	16	5.5	0.0	2.3	2	0	0	2	2	2	0	Stress-inducible	humoral	factor	Turandot
PsaF	PF17550.2	gi|284162655|ref|YP_003401278.1|	-	0.12	11.9	0.1	0.18	11.3	0.1	1.2	1	0	0	1	1	1	0	Family	of	unknown	function
Gp-FAR-1	PF05823.12	gi|284162655|ref|YP_003401278.1|	-	0.12	12.7	1.0	0.76	10.1	0.1	2.1	2	0	0	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
BRO1	PF03097.18	gi|284162655|ref|YP_003401278.1|	-	0.13	11.0	0.0	0.14	10.9	0.0	1.3	1	1	0	1	1	1	0	BRO1-like	domain
tRNA_synthFbeta	PF17759.1	gi|284162656|ref|YP_003401279.1|	-	2e-48	164.7	0.0	3e-48	164.1	0.0	1.3	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|284162656|ref|YP_003401279.1|	-	1.6e-17	63.5	1.1	1.9e-14	53.7	0.5	2.8	2	0	0	2	2	2	2	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|284162656|ref|YP_003401279.1|	-	4.9e-14	52.4	0.0	8e-14	51.7	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
PhetRS_B1	PF18262.1	gi|284162656|ref|YP_003401279.1|	-	0.0088	16.2	0.0	0.094	13.0	0.0	2.5	2	0	0	2	2	2	1	Phe-tRNA	synthetase	beta	subunit	B1	domain
tRNA-synt_2d	PF01409.20	gi|284162656|ref|YP_003401279.1|	-	0.0092	15.5	0.0	0.073	12.5	0.0	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
PALP	PF00291.25	gi|284162657|ref|YP_003401280.1|	-	3.6e-40	138.2	0.0	4.3e-40	138.0	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
polyprenyl_synt	PF00348.17	gi|284162658|ref|YP_003401281.1|	-	6.5e-68	228.6	0.0	8.4e-68	228.2	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
FMN_dh	PF01070.18	gi|284162659|ref|YP_003401282.1|	-	2.9e-23	82.5	0.0	2.8e-15	56.2	0.1	2.3	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|284162659|ref|YP_003401282.1|	-	4.8e-06	25.8	1.0	0.0055	15.8	0.6	2.8	3	1	0	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.15	gi|284162659|ref|YP_003401282.1|	-	0.0017	17.8	1.1	0.0026	17.2	0.2	1.6	2	0	0	2	2	2	1	Nitronate	monooxygenase
Glu_synthase	PF01645.17	gi|284162659|ref|YP_003401282.1|	-	0.048	12.8	0.1	0.082	12.0	0.1	1.4	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
CobT	PF06213.12	gi|284162659|ref|YP_003401282.1|	-	0.12	11.7	0.1	0.36	10.2	0.0	1.6	2	0	0	2	2	2	0	Cobalamin	biosynthesis	protein	CobT
DHO_dh	PF01180.21	gi|284162659|ref|YP_003401282.1|	-	0.13	11.5	0.0	0.27	10.4	0.0	1.5	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
AA_kinase	PF00696.28	gi|284162660|ref|YP_003401283.1|	-	2.1e-34	119.2	0.1	2.4e-34	119.0	0.1	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
PolC_DP2	PF03833.13	gi|284162661|ref|YP_003401284.1|	-	0	1374.1	2.5	0	1372.7	0.2	2.0	2	0	0	2	2	2	2	DNA	polymerase	II	large	subunit	DP2
DZR	PF12773.7	gi|284162661|ref|YP_003401284.1|	-	2.8	8.0	19.1	3.7	7.6	0.9	3.0	2	1	0	2	2	2	0	Double	zinc	ribbon
ABC_tran	PF00005.27	gi|284162662|ref|YP_003401285.1|	-	9.3e-34	116.9	0.0	1.2e-33	116.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162662|ref|YP_003401285.1|	-	5.3e-14	52.7	3.7	1.2e-07	31.8	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284162662|ref|YP_003401285.1|	-	6.3e-08	32.3	0.1	0.001	18.5	0.0	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284162662|ref|YP_003401285.1|	-	1.7e-06	28.0	2.2	0.00089	19.1	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|284162662|ref|YP_003401285.1|	-	0.00032	21.0	0.1	0.0013	19.0	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|284162662|ref|YP_003401285.1|	-	0.00035	20.6	0.1	0.0095	16.0	0.0	2.2	1	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|284162662|ref|YP_003401285.1|	-	0.00037	20.9	0.0	0.00072	20.0	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284162662|ref|YP_003401285.1|	-	0.00087	19.8	2.3	0.0023	18.4	2.3	1.8	1	1	0	1	1	1	1	AAA	domain
DUF3584	PF12128.8	gi|284162662|ref|YP_003401285.1|	-	0.0018	15.9	0.1	0.0023	15.6	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
ABC_ATPase	PF09818.9	gi|284162662|ref|YP_003401285.1|	-	0.003	16.4	0.0	0.25	10.1	0.1	2.2	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
NTPase_1	PF03266.15	gi|284162662|ref|YP_003401285.1|	-	0.0032	17.4	0.4	2.8	7.8	0.2	2.4	2	0	0	2	2	2	2	NTPase
AAA_29	PF13555.6	gi|284162662|ref|YP_003401285.1|	-	0.005	16.5	0.0	0.009	15.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.6	gi|284162662|ref|YP_003401285.1|	-	0.0053	16.5	0.1	0.011	15.5	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.6	gi|284162662|ref|YP_003401285.1|	-	0.0086	14.8	0.0	0.084	11.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|284162662|ref|YP_003401285.1|	-	0.01	15.8	0.4	0.03	14.3	0.1	1.8	2	0	0	2	2	2	0	NACHT	domain
TniB	PF05621.11	gi|284162662|ref|YP_003401285.1|	-	0.011	15.1	0.7	0.6	9.5	0.2	2.1	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_24	PF13479.6	gi|284162662|ref|YP_003401285.1|	-	0.017	14.9	0.1	0.039	13.7	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|284162662|ref|YP_003401285.1|	-	0.019	14.6	0.0	0.047	13.3	0.0	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
MobB	PF03205.14	gi|284162662|ref|YP_003401285.1|	-	0.019	14.8	0.3	0.062	13.2	0.1	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.29	gi|284162662|ref|YP_003401285.1|	-	0.026	14.9	0.2	0.34	11.3	0.2	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|284162662|ref|YP_003401285.1|	-	0.033	14.7	0.2	0.1	13.2	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|284162662|ref|YP_003401285.1|	-	0.034	13.8	0.0	0.061	13.0	0.0	1.5	1	0	0	1	1	1	0	Thymidylate	kinase
cobW	PF02492.19	gi|284162662|ref|YP_003401285.1|	-	0.045	13.4	0.0	0.079	12.5	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|284162662|ref|YP_003401285.1|	-	0.049	13.6	0.0	0.4	10.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AFG1_ATPase	PF03969.16	gi|284162662|ref|YP_003401285.1|	-	0.049	12.5	0.1	0.088	11.7	0.0	1.4	2	0	0	2	2	2	0	AFG1-like	ATPase
AAA_33	PF13671.6	gi|284162662|ref|YP_003401285.1|	-	0.052	13.7	0.1	0.18	12.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|284162662|ref|YP_003401285.1|	-	0.056	13.2	0.1	0.15	11.8	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
NB-ARC	PF00931.22	gi|284162662|ref|YP_003401285.1|	-	0.12	11.6	1.7	0.33	10.1	1.6	1.8	1	1	0	1	1	1	0	NB-ARC	domain
SbcCD_C	PF13558.6	gi|284162662|ref|YP_003401285.1|	-	0.13	12.5	0.0	2.9	8.2	0.0	2.5	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
FtsK_SpoIIIE	PF01580.18	gi|284162662|ref|YP_003401285.1|	-	0.13	11.6	0.1	0.23	10.8	0.1	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Flavin_Reduct	PF01613.18	gi|284162663|ref|YP_003401286.1|	-	2.1e-24	86.3	0.0	2.4e-24	86.1	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Trp_leader2	PF08056.11	gi|284162663|ref|YP_003401286.1|	-	0.074	13.0	0.6	2.8	8.0	0.1	2.7	3	0	0	3	3	3	0	Tryptophan	operon	leader	peptide
OCD_Mu_crystall	PF02423.15	gi|284162664|ref|YP_003401287.1|	-	3.5e-121	404.0	0.1	4e-121	403.8	0.1	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Gp_dh_N	PF00044.24	gi|284162665|ref|YP_003401288.1|	-	0.00018	21.8	0.5	0.00049	20.4	0.1	2.0	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|284162665|ref|YP_003401288.1|	-	0.0072	17.1	0.0	0.015	16.1	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CoA_binding	PF02629.19	gi|284162665|ref|YP_003401288.1|	-	0.021	15.5	0.1	0.1	13.3	0.0	2.2	2	0	0	2	2	2	0	CoA	binding	domain
F420_oxidored	PF03807.17	gi|284162665|ref|YP_003401288.1|	-	0.033	14.7	0.0	0.11	13.1	0.0	1.9	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.18	gi|284162665|ref|YP_003401288.1|	-	0.035	14.4	0.1	0.093	13.0	0.1	1.7	1	0	0	1	1	1	0	TrkA-N	domain
3HCDH_N	PF02737.18	gi|284162665|ref|YP_003401288.1|	-	0.035	14.0	0.0	0.066	13.1	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|284162665|ref|YP_003401288.1|	-	0.038	14.2	0.7	10	6.4	0.2	2.5	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|284162665|ref|YP_003401288.1|	-	0.047	13.3	0.1	0.29	10.7	0.1	2.1	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|284162665|ref|YP_003401288.1|	-	0.24	10.7	0.7	0.37	10.1	0.1	1.7	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
4HBT	PF03061.22	gi|284162666|ref|YP_003401289.1|	-	7.2e-13	48.7	0.1	1.2e-12	48.0	0.1	1.4	1	1	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.6	gi|284162666|ref|YP_003401289.1|	-	1.1e-05	25.6	0.0	1.5e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
Arginosuc_synth	PF00764.19	gi|284162667|ref|YP_003401290.1|	-	4.5e-171	569.4	0.0	5.1e-171	569.2	0.0	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
NAD_synthase	PF02540.17	gi|284162667|ref|YP_003401290.1|	-	0.00021	20.5	0.0	0.00032	19.9	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|284162667|ref|YP_003401290.1|	-	0.00044	19.8	0.0	0.0011	18.5	0.0	1.7	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
MeaB	PF03308.16	gi|284162667|ref|YP_003401290.1|	-	0.039	12.9	0.0	0.068	12.1	0.0	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
tRNA_Me_trans	PF03054.16	gi|284162667|ref|YP_003401290.1|	-	0.057	12.2	0.0	0.085	11.6	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
NOG1_N	PF17835.1	gi|284162668|ref|YP_003401291.1|	-	3.3e-34	118.2	0.2	7.1e-34	117.1	0.2	1.5	1	0	0	1	1	1	1	NOG1	N-terminal	helical	domain
MMR_HSR1	PF01926.23	gi|284162668|ref|YP_003401291.1|	-	8.3e-19	67.8	0.0	1.8e-18	66.7	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
NOG1	PF06858.14	gi|284162668|ref|YP_003401291.1|	-	7.7e-17	60.8	1.5	1.7e-16	59.7	0.4	2.2	2	0	0	2	2	2	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.18	gi|284162668|ref|YP_003401291.1|	-	3.1e-12	46.3	0.0	5.5e-12	45.5	0.0	1.4	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
AIG1	PF04548.16	gi|284162668|ref|YP_003401291.1|	-	2.4e-05	23.8	0.0	4e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	AIG1	family
RsgA_GTPase	PF03193.16	gi|284162668|ref|YP_003401291.1|	-	3.6e-05	23.7	0.5	0.046	13.6	0.0	2.9	1	1	1	2	2	2	2	RsgA	GTPase
SRPRB	PF09439.10	gi|284162668|ref|YP_003401291.1|	-	0.00077	18.9	0.0	0.0014	18.1	0.0	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
GTP_EFTU	PF00009.27	gi|284162668|ref|YP_003401291.1|	-	0.0014	18.2	0.0	0.0089	15.6	0.0	2.3	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Ras	PF00071.22	gi|284162668|ref|YP_003401291.1|	-	0.0038	16.8	0.0	0.021	14.4	0.0	2.1	2	1	0	2	2	2	1	Ras	family
ATP_bind_1	PF03029.17	gi|284162668|ref|YP_003401291.1|	-	0.0046	16.8	0.3	0.61	9.8	0.0	2.4	1	1	1	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
Dynamin_N	PF00350.23	gi|284162668|ref|YP_003401291.1|	-	0.0075	16.3	0.9	0.033	14.2	1.0	2.0	1	1	0	1	1	1	1	Dynamin	family
PPV_E1_C	PF00519.17	gi|284162668|ref|YP_003401291.1|	-	0.016	14.1	0.0	0.021	13.7	0.0	1.1	1	0	0	1	1	1	0	Papillomavirus	helicase
Osmo_CC	PF08946.10	gi|284162668|ref|YP_003401291.1|	-	0.091	13.0	0.2	0.42	10.9	0.2	2.1	1	0	0	1	1	1	0	Osmosensory	transporter	coiled	coil
AAA_16	PF13191.6	gi|284162668|ref|YP_003401291.1|	-	0.17	12.2	0.0	0.83	10.0	0.0	2.0	2	1	0	3	3	3	0	AAA	ATPase	domain
HEPN_RiboL-PSP	PF18735.1	gi|284162668|ref|YP_003401291.1|	-	1.5	8.7	4.5	0.66	9.9	1.4	1.9	2	2	0	2	2	2	0	RiboL-PSP-HEPN
CTP_transf_like	PF01467.26	gi|284162669|ref|YP_003401292.1|	-	9.9e-27	93.9	0.1	1.2e-26	93.7	0.1	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|284162669|ref|YP_003401292.1|	-	0.004	17.1	0.1	0.049	13.5	0.1	2.2	1	1	1	2	2	2	1	FAD	synthetase
Nucleo_P87	PF07267.11	gi|284162669|ref|YP_003401292.1|	-	0.044	12.6	0.1	0.051	12.4	0.1	1.0	1	0	0	1	1	1	0	Nucleopolyhedrovirus	capsid	protein	P87
Usp	PF00582.26	gi|284162670|ref|YP_003401293.1|	-	5.5e-10	39.9	3.1	1.2e-06	29.1	0.2	2.7	2	1	0	2	2	2	2	Universal	stress	protein	family
Pneumo_phosprot	PF02478.16	gi|284162670|ref|YP_003401293.1|	-	0.05	13.1	4.2	0.39	10.2	0.1	2.1	2	0	0	2	2	2	0	Pneumovirus	phosphoprotein
FrhB_FdhB_C	PF04432.13	gi|284162671|ref|YP_003401294.1|	-	1.6e-38	132.0	0.1	1.6e-38	132.0	0.1	2.0	3	0	0	3	3	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
Fer4	PF00037.27	gi|284162671|ref|YP_003401294.1|	-	2.7e-16	58.6	41.1	9.1e-09	34.8	1.6	5.4	5	1	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162671|ref|YP_003401294.1|	-	1.1e-15	57.9	23.7	1.3e-09	38.5	5.6	4.3	4	0	0	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162671|ref|YP_003401294.1|	-	6e-14	52.7	22.5	8.2e-09	36.3	5.6	4.1	4	0	0	4	4	4	2	4Fe-4S	double	cluster	binding	domain
FrhB_FdhB_N	PF04422.13	gi|284162671|ref|YP_003401294.1|	-	3.5e-13	49.5	0.0	1.3e-12	47.6	0.0	2.1	2	0	0	2	2	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_9	PF13187.6	gi|284162671|ref|YP_003401294.1|	-	5.8e-13	48.8	27.3	5.1e-10	39.4	5.2	3.2	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162671|ref|YP_003401294.1|	-	7.4e-13	47.8	39.0	8.1e-05	22.5	4.0	5.1	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162671|ref|YP_003401294.1|	-	6.1e-11	41.9	42.7	3.1e-06	27.0	3.1	5.0	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162671|ref|YP_003401294.1|	-	9e-11	41.7	30.0	5.1e-07	29.7	8.3	4.2	3	1	2	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162671|ref|YP_003401294.1|	-	3.4e-09	37.1	22.3	5.2e-05	23.7	3.2	4.4	4	2	0	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162671|ref|YP_003401294.1|	-	2e-08	34.2	32.2	6.3e-06	26.2	12.8	5.0	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162671|ref|YP_003401294.1|	-	3.1e-08	33.5	40.3	6.5e-05	23.1	2.7	4.9	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284162671|ref|YP_003401294.1|	-	3.6e-08	33.7	21.1	3e-05	24.4	4.7	4.0	4	1	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284162671|ref|YP_003401294.1|	-	1.7e-05	25.5	22.7	0.22	12.4	0.3	5.0	5	1	0	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|284162671|ref|YP_003401294.1|	-	0.001	19.7	20.7	0.22	12.3	0.5	4.8	5	0	0	5	5	4	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|284162671|ref|YP_003401294.1|	-	0.008	17.1	4.3	0.008	17.1	4.3	5.3	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|284162671|ref|YP_003401294.1|	-	0.08	13.0	10.6	1	9.5	0.6	3.9	3	0	0	3	3	3	0	Divergent	4Fe-4S	mono-cluster
Fer4_13	PF13370.6	gi|284162671|ref|YP_003401294.1|	-	0.75	10.4	31.6	0.35	11.4	1.3	4.7	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|284162671|ref|YP_003401294.1|	-	3.9	7.7	31.0	12	6.2	2.2	4.2	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162672|ref|YP_003401295.1|	-	9.5e-13	47.4	14.3	1.4e-08	34.1	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|284162672|ref|YP_003401295.1|	-	1.6e-10	41.4	9.0	2.6e-10	40.7	9.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162672|ref|YP_003401295.1|	-	1.1e-09	39.1	4.7	0.00051	20.9	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|284162672|ref|YP_003401295.1|	-	1.9e-09	37.6	6.7	2.8e-09	37.0	6.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162672|ref|YP_003401295.1|	-	2e-08	34.2	19.6	1.9e-06	27.9	9.8	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284162672|ref|YP_003401295.1|	-	1.9e-07	31.1	18.9	1.3e-05	25.3	11.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162672|ref|YP_003401295.1|	-	4.2e-07	29.8	13.6	0.00029	20.8	4.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|284162672|ref|YP_003401295.1|	-	9.6e-07	29.3	1.6	0.028	15.0	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284162672|ref|YP_003401295.1|	-	2e-06	28.1	0.6	0.069	13.6	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|284162672|ref|YP_003401295.1|	-	2.6e-05	25.0	3.3	0.0046	17.8	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162672|ref|YP_003401295.1|	-	6.5e-05	22.8	11.6	0.025	14.7	2.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|284162672|ref|YP_003401295.1|	-	0.00036	20.8	11.7	0.01	16.3	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|284162672|ref|YP_003401295.1|	-	0.001	19.2	8.9	0.027	14.7	1.5	2.3	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162672|ref|YP_003401295.1|	-	0.0022	18.8	16.5	0.086	13.8	3.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|284162672|ref|YP_003401295.1|	-	0.39	11.3	11.3	2.6	8.7	1.1	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|284162672|ref|YP_003401295.1|	-	0.48	11.2	7.6	6.8	7.5	0.9	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
NADHdh	PF00146.21	gi|284162673|ref|YP_003401296.1|	-	4.8e-85	285.5	23.0	5.8e-85	285.2	23.0	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
BNIP3	PF06553.12	gi|284162673|ref|YP_003401296.1|	-	0.36	10.5	0.2	0.6	9.7	0.2	1.3	1	0	0	1	1	1	0	BNIP3
Herpes_UL73	PF03554.13	gi|284162673|ref|YP_003401296.1|	-	1.5	8.8	4.3	0.55	10.3	0.8	2.1	2	0	0	2	2	2	0	UL73	viral	envelope	glycoprotein
Complex1_49kDa	PF00346.19	gi|284162674|ref|YP_003401297.1|	-	3.2e-74	249.4	0.0	6.3e-72	241.9	0.0	2.2	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
Complex1_30kDa	PF00329.19	gi|284162674|ref|YP_003401297.1|	-	5e-21	75.6	0.1	1.1e-20	74.5	0.1	1.5	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Oxidored_q6	PF01058.22	gi|284162674|ref|YP_003401297.1|	-	3.3e-20	72.2	0.2	6.7e-20	71.3	0.2	1.5	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|284162674|ref|YP_003401297.1|	-	3.7e-05	22.8	0.0	0.0013	17.7	0.1	2.6	3	0	0	3	3	3	1	Nickel-dependent	hydrogenase
Oxidored_q4	PF00507.19	gi|284162675|ref|YP_003401298.1|	-	7.8e-07	29.2	0.0	1.1e-06	28.8	0.0	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
Proton_antipo_M	PF00361.20	gi|284162676|ref|YP_003401299.1|	-	3.1e-26	92.3	31.4	6.6e-22	78.1	5.3	3.8	2	1	2	4	4	4	3	Proton-conducting	membrane	transporter
Proton_antipo_M	PF00361.20	gi|284162677|ref|YP_003401300.1|	-	2.5e-36	125.4	29.3	2.5e-35	122.1	26.6	3.2	4	0	0	4	4	4	2	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|284162677|ref|YP_003401300.1|	-	9.8e-10	38.4	4.6	4.1e-09	36.4	3.3	2.9	1	1	0	1	1	1	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Proton_antipo_M	PF00361.20	gi|284162678|ref|YP_003401301.1|	-	2e-49	168.4	26.5	3.9e-49	167.4	26.5	1.5	1	0	0	1	1	1	1	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|284162678|ref|YP_003401301.1|	-	3.9e-05	23.6	0.2	3.9e-05	23.6	0.2	4.5	4	0	0	4	4	4	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.24	gi|284162679|ref|YP_003401302.1|	-	0.0016	18.0	11.3	0.0034	17.0	11.3	1.6	1	1	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
CstA	PF02554.14	gi|284162680|ref|YP_003401303.1|	-	0.0012	17.8	10.0	0.0014	17.6	10.0	1.0	1	0	0	1	1	1	1	Carbon	starvation	protein	CstA
Oxidored_q3	PF00499.20	gi|284162680|ref|YP_003401303.1|	-	0.003	17.3	16.9	0.003	17.3	16.9	1.6	1	1	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF2434	PF10361.9	gi|284162680|ref|YP_003401303.1|	-	0.014	14.4	5.1	0.018	14.0	5.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2434)
DUF2339	PF10101.9	gi|284162680|ref|YP_003401303.1|	-	0.07	11.7	11.8	0.079	11.5	11.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2339)
IspA	PF04279.15	gi|284162680|ref|YP_003401303.1|	-	0.24	11.6	11.9	0.96	9.6	6.5	2.2	1	1	1	2	2	2	0	Intracellular	septation	protein	A
DUF4131	PF13567.6	gi|284162680|ref|YP_003401303.1|	-	0.54	9.9	12.7	0.035	13.7	2.5	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Kinocilin	PF15033.6	gi|284162680|ref|YP_003401303.1|	-	1.4	8.6	3.7	2	8.1	3.7	1.4	1	0	0	1	1	1	0	Kinocilin	protein
DUF2304	PF10066.9	gi|284162680|ref|YP_003401303.1|	-	4.8	7.5	17.5	0.44	10.8	9.8	2.6	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2304)
DUF1129	PF06570.11	gi|284162680|ref|YP_003401303.1|	-	6.9	6.1	11.3	1e+02	2.3	11.3	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
Bac_luciferase	PF00296.20	gi|284162681|ref|YP_003401304.1|	-	3e-39	135.3	0.0	1.3e-37	129.9	0.0	2.0	1	1	0	1	1	1	1	Luciferase-like	monooxygenase
MTD	PF01993.18	gi|284162682|ref|YP_003401305.1|	-	2.2e-99	332.2	1.3	2.7e-99	332.0	1.3	1.0	1	0	0	1	1	1	1	methylene-5,6,7,8-tetrahydromethanopterin	dehydrogenase
Flavoprotein	PF02441.19	gi|284162682|ref|YP_003401305.1|	-	0.039	13.7	0.1	0.064	13.0	0.1	1.6	1	1	0	1	1	1	0	Flavoprotein
SHMT	PF00464.19	gi|284162683|ref|YP_003401306.1|	-	4.6e-70	236.2	0.0	5.4e-70	236.0	0.0	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.21	gi|284162683|ref|YP_003401306.1|	-	1.1e-07	31.5	0.0	1.5e-07	31.0	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.13	gi|284162683|ref|YP_003401306.1|	-	1.2e-05	24.5	0.0	2.3e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
Aminotran_5	PF00266.19	gi|284162683|ref|YP_003401306.1|	-	2.2e-05	23.6	0.0	3.2e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|284162683|ref|YP_003401306.1|	-	0.00025	19.7	0.0	0.0004	19.0	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.21	gi|284162683|ref|YP_003401306.1|	-	0.0019	17.4	0.0	0.005	16.1	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
TssO	PF17561.2	gi|284162683|ref|YP_003401306.1|	-	0.022	14.9	0.9	0.041	14.0	0.9	1.4	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssO
Vta1_C	PF18097.1	gi|284162684|ref|YP_003401307.1|	-	0.027	14.1	0.0	0.065	13.0	0.0	1.7	1	0	0	1	1	1	0	Vta1	C-terminal	domain
FrhB_FdhB_C	PF04432.13	gi|284162685|ref|YP_003401308.1|	-	1.6e-45	154.7	0.1	3.5e-45	153.6	0.1	1.6	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|284162685|ref|YP_003401308.1|	-	8.8e-26	89.9	0.1	1.9e-25	88.8	0.1	1.6	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_16	PF13484.6	gi|284162685|ref|YP_003401308.1|	-	0.00061	20.7	0.2	0.00061	20.7	0.2	3.4	3	0	0	3	3	3	1	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|284162685|ref|YP_003401308.1|	-	0.0011	19.3	2.6	0.0011	19.3	2.6	3.0	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|284162685|ref|YP_003401308.1|	-	0.0021	17.8	6.4	0.0021	17.8	6.4	2.8	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162685|ref|YP_003401308.1|	-	0.0036	17.4	1.1	0.0036	17.4	1.1	2.9	2	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162685|ref|YP_003401308.1|	-	0.0094	16.0	2.9	0.0094	16.0	2.9	2.2	2	0	0	2	2	1	1	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162685|ref|YP_003401308.1|	-	0.013	15.6	4.1	0.013	15.6	4.1	2.7	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|284162685|ref|YP_003401308.1|	-	0.062	13.8	1.1	0.062	13.8	1.1	2.8	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|284162685|ref|YP_003401308.1|	-	0.27	11.8	10.7	0.25	11.9	0.5	2.8	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_21	PF14697.6	gi|284162685|ref|YP_003401308.1|	-	0.29	11.3	16.0	0.084	13.0	12.1	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|284162685|ref|YP_003401308.1|	-	0.58	10.4	19.1	0.1	12.8	2.6	2.9	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162685|ref|YP_003401308.1|	-	1	10.0	22.3	22	5.7	20.7	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
tRNA-synt_1f	PF01921.18	gi|284162686|ref|YP_003401309.1|	-	1.1e-121	406.2	0.0	1.9e-121	405.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|284162686|ref|YP_003401309.1|	-	7.1e-08	31.6	0.0	0.0002	20.2	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|284162686|ref|YP_003401309.1|	-	8.1e-05	22.1	0.0	0.29	10.4	0.0	2.6	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
NIR_SIR	PF01077.22	gi|284162686|ref|YP_003401309.1|	-	0.15	11.6	0.0	0.31	10.5	0.0	1.6	1	0	0	1	1	1	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
tRNA-synt_1b	PF00579.25	gi|284162686|ref|YP_003401309.1|	-	0.18	11.1	0.1	0.46	9.7	0.0	1.7	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(W	and	Y)
CTP_transf_1	PF01148.20	gi|284162687|ref|YP_003401310.1|	-	0.0085	15.9	7.6	1.2	8.8	4.6	2.8	1	1	1	2	2	2	2	Cytidylyltransferase	family
ThrE	PF06738.12	gi|284162687|ref|YP_003401310.1|	-	0.18	11.1	4.3	0.063	12.6	1.0	1.7	1	1	1	2	2	2	0	Putative	threonine/serine	exporter
PALP	PF00291.25	gi|284162688|ref|YP_003401311.1|	-	3.4e-84	282.7	2.3	3.9e-84	282.5	2.3	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACP_syn_III_C	PF08541.10	gi|284162688|ref|YP_003401311.1|	-	0.055	13.7	0.3	26	5.1	0.0	3.2	3	0	0	3	3	3	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Glyco_transf_20	PF00982.21	gi|284162689|ref|YP_003401312.1|	-	1.6e-160	534.9	0.0	2.2e-160	534.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	20
Trehalose_PPase	PF02358.16	gi|284162689|ref|YP_003401312.1|	-	1.6e-53	181.2	0.0	2.8e-53	180.4	0.0	1.4	1	0	0	1	1	1	1	Trehalose-phosphatase
Glycos_transf_1	PF00534.20	gi|284162689|ref|YP_003401312.1|	-	6.4e-08	32.3	2.5	0.018	14.6	0.1	3.4	3	0	0	3	3	3	2	Glycosyl	transferases	group	1
Hydrolase_3	PF08282.12	gi|284162689|ref|YP_003401312.1|	-	2.7e-06	27.3	0.1	1.5e-05	24.8	0.0	2.2	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
PIN_4	PF13638.6	gi|284162689|ref|YP_003401312.1|	-	0.0012	19.2	0.4	0.0024	18.1	0.4	1.5	1	0	0	1	1	1	1	PIN	domain
Glyco_trans_1_4	PF13692.6	gi|284162689|ref|YP_003401312.1|	-	0.004	17.6	0.3	0.012	16.0	0.1	2.0	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|284162689|ref|YP_003401312.1|	-	0.028	14.8	0.2	0.076	13.4	0.2	1.7	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.11	gi|284162689|ref|YP_003401312.1|	-	0.076	12.7	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Starch	synthase	catalytic	domain
HAD_SAK_2	PF18143.1	gi|284162689|ref|YP_003401312.1|	-	0.28	11.5	1.4	0.94	9.8	0.3	2.5	2	1	0	2	2	2	0	HAD	domain	in	Swiss	Army	Knife	RNA	repair	proteins
IZUMO	PF15005.6	gi|284162689|ref|YP_003401312.1|	-	0.3	11.6	1.2	0.85	10.1	1.2	1.8	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
CdiI_2	PF18593.1	gi|284162689|ref|YP_003401312.1|	-	3.6	8.3	5.0	1.1e+02	3.5	0.1	3.8	3	1	1	4	4	3	0	CdiI	immunity	protein
AAA_26	PF13500.6	gi|284162690|ref|YP_003401313.1|	-	0.00098	19.0	0.0	0.023	14.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.14	gi|284162690|ref|YP_003401313.1|	-	0.15	12.0	0.0	0.34	10.8	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
UbiD	PF01977.16	gi|284162691|ref|YP_003401314.1|	-	5e-178	592.1	0.2	6.1e-178	591.8	0.2	1.1	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Glyco_trans_1_2	PF13524.6	gi|284162692|ref|YP_003401315.1|	-	0.012	16.0	0.0	0.08	13.3	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284162692|ref|YP_003401315.1|	-	0.013	15.5	0.0	0.037	14.0	0.0	1.9	1	1	0	1	1	1	0	Glycosyltransferase	Family	4
ArgJ	PF01960.18	gi|284162693|ref|YP_003401316.1|	-	2.3e-132	441.3	1.6	2.8e-132	441.0	1.6	1.0	1	0	0	1	1	1	1	ArgJ	family
tRNA-synt_His	PF13393.6	gi|284162694|ref|YP_003401317.1|	-	4e-68	230.0	0.0	5e-68	229.7	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.25	gi|284162694|ref|YP_003401317.1|	-	4.5e-16	59.3	0.0	2.7e-15	56.8	0.0	2.2	2	1	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|284162694|ref|YP_003401317.1|	-	1e-11	44.8	2.1	5.7e-11	42.4	1.5	2.3	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2	PF00152.20	gi|284162694|ref|YP_003401317.1|	-	5.3e-06	25.7	0.9	0.00029	20.0	0.3	2.6	2	1	0	2	2	2	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|284162694|ref|YP_003401317.1|	-	0.14	11.6	0.0	0.44	10.0	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
Phos_pyr_kin	PF08543.12	gi|284162695|ref|YP_003401318.1|	-	2.4e-53	181.1	0.3	2.7e-53	180.9	0.3	1.0	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|284162695|ref|YP_003401318.1|	-	1.5e-07	31.0	0.1	2e-07	30.6	0.1	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.17	gi|284162695|ref|YP_003401318.1|	-	1.8e-07	30.9	0.2	2e-07	30.7	0.2	1.1	1	0	0	1	1	1	1	Carbohydrate	kinase
HK	PF02110.15	gi|284162695|ref|YP_003401318.1|	-	0.00034	20.1	0.2	0.00061	19.3	0.2	1.4	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
GAT	PF03127.14	gi|284162695|ref|YP_003401318.1|	-	0.096	13.0	0.0	8.7	6.7	0.0	2.2	2	0	0	2	2	2	0	GAT	domain
UPF0126	PF03458.13	gi|284162696|ref|YP_003401319.1|	-	1.8e-43	146.3	22.4	3.6e-22	78.0	5.8	2.3	2	0	0	2	2	2	2	UPF0126	domain
Phage_integr_3	PF16795.5	gi|284162697|ref|YP_003401320.1|	-	4.2e-48	163.3	0.4	4.2e-48	163.3	0.4	1.5	2	0	0	2	2	2	1	Archaeal	phage	integrase
DUF4313	PF14190.6	gi|284162697|ref|YP_003401320.1|	-	0.076	13.0	0.3	47	4.0	0.1	3.6	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4313)
PRESAN	PF09687.10	gi|284162698|ref|YP_003401321.1|	-	0.044	14.3	1.3	0.12	12.9	0.9	1.9	1	1	0	1	1	1	0	Plasmodium	RESA	N-terminal
Sulfotransfer_3	PF13469.6	gi|284162698|ref|YP_003401321.1|	-	0.055	13.8	0.0	0.072	13.5	0.0	1.2	1	0	0	1	1	1	0	Sulfotransferase	family
DUF4476	PF14771.6	gi|284162698|ref|YP_003401321.1|	-	0.08	13.3	0.0	0.16	12.3	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4476)
DUF202	PF02656.15	gi|284162701|ref|YP_003401324.1|	-	0.015	15.7	3.0	0.021	15.2	3.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
Colicin	PF01024.19	gi|284162701|ref|YP_003401324.1|	-	0.59	10.0	2.8	0.67	9.8	2.8	1.0	1	0	0	1	1	1	0	Colicin	pore	forming	domain
Col_cuticle_N	PF01484.17	gi|284162701|ref|YP_003401324.1|	-	3.2	7.9	6.2	0.28	11.3	1.2	1.8	2	0	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
DUF2434	PF10361.9	gi|284162702|ref|YP_003401325.1|	-	0.0045	16.0	0.3	0.005	15.9	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2434)
HTH_38	PF13936.6	gi|284162705|ref|YP_003401328.1|	-	1.2e-05	25.0	0.3	6.4e-05	22.6	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|284162705|ref|YP_003401328.1|	-	6.1e-05	22.7	0.0	0.00021	21.0	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
Sigma70_r4_2	PF08281.12	gi|284162705|ref|YP_003401328.1|	-	0.00022	20.8	0.2	0.0018	17.9	0.0	2.6	3	1	0	3	3	3	1	Sigma-70,	region	4
HTH_Tnp_Tc3_1	PF11427.8	gi|284162705|ref|YP_003401328.1|	-	0.0019	18.0	0.0	0.0042	16.9	0.0	1.6	1	0	0	1	1	1	1	Tc3	transposase
HTH_24	PF13412.6	gi|284162705|ref|YP_003401328.1|	-	0.0027	17.2	0.0	0.0079	15.7	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_3	PF01381.22	gi|284162705|ref|YP_003401328.1|	-	0.0067	16.5	0.1	0.078	13.0	0.1	2.3	2	0	0	2	2	2	1	Helix-turn-helix
Terminase_5	PF06056.12	gi|284162705|ref|YP_003401328.1|	-	0.007	16.2	0.8	0.8	9.6	0.0	2.9	3	0	0	3	3	3	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_11	PF08279.12	gi|284162705|ref|YP_003401328.1|	-	0.0082	16.1	0.0	0.018	15.0	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_29	PF13551.6	gi|284162705|ref|YP_003401328.1|	-	0.0086	16.1	0.0	0.017	15.1	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
Sigma70_r4	PF04545.16	gi|284162705|ref|YP_003401328.1|	-	0.01	15.4	0.9	0.03	13.8	0.1	2.2	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_7	PF02796.15	gi|284162705|ref|YP_003401328.1|	-	0.021	14.9	2.2	0.023	14.8	0.1	2.2	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	resolvase
Trp_repressor	PF01371.19	gi|284162705|ref|YP_003401328.1|	-	0.073	13.2	0.1	0.3	11.2	0.0	2.1	2	0	0	2	2	2	0	Trp	repressor	protein
Prim-Pol	PF09250.11	gi|284162709|ref|YP_003401332.1|	-	1.2e-28	100.5	0.0	2.6e-28	99.3	0.0	1.6	2	0	0	2	2	2	1	Bifunctional	DNA	primase/polymerase,	N-terminal
Spore_coat_CotO	PF14153.6	gi|284162709|ref|YP_003401332.1|	-	0.033	14.1	5.8	0.059	13.3	5.8	1.3	1	0	0	1	1	1	0	Spore	coat	protein	CotO
FIVAR	PF07554.13	gi|284162709|ref|YP_003401332.1|	-	0.082	13.7	0.2	0.21	12.4	0.2	1.6	1	0	0	1	1	1	0	FIVAR	domain
Nop14	PF04147.12	gi|284162709|ref|YP_003401332.1|	-	0.65	8.1	19.9	0.9	7.7	19.9	1.1	1	0	0	1	1	1	0	Nop14-like	family
Raftlin	PF15250.6	gi|284162709|ref|YP_003401332.1|	-	3.8	6.2	8.4	6	5.5	8.4	1.2	1	0	0	1	1	1	0	Raftlin
RHH_1	PF01402.21	gi|284162711|ref|YP_003401334.1|	-	1.9e-09	37.1	1.1	2.9e-09	36.5	1.1	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_5	PF07878.11	gi|284162711|ref|YP_003401334.1|	-	0.00035	20.4	0.1	0.0004	20.2	0.1	1.1	1	0	0	1	1	1	1	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
HicB_lk_antitox	PF15919.5	gi|284162711|ref|YP_003401334.1|	-	0.0035	17.4	0.0	0.0044	17.1	0.0	1.1	1	0	0	1	1	1	1	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
CopG_antitoxin	PF12441.8	gi|284162711|ref|YP_003401334.1|	-	0.055	14.0	0.0	0.062	13.9	0.0	1.1	1	0	0	1	1	1	0	CopG	antitoxin	of	type	II	toxin-antitoxin	system
PadR	PF03551.14	gi|284162712|ref|YP_003401335.1|	-	0.016	15.1	0.0	0.044	13.7	0.0	1.8	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
PID	PF00640.23	gi|284162712|ref|YP_003401335.1|	-	0.069	13.2	0.2	0.1	12.6	0.2	1.3	1	0	0	1	1	1	0	Phosphotyrosine	interaction	domain	(PTB/PID)
Pribosyltran	PF00156.27	gi|284162713|ref|YP_003401336.1|	-	4.9e-25	87.9	0.1	8.6e-25	87.1	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|284162713|ref|YP_003401336.1|	-	0.04	13.4	0.0	0.052	13.0	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
UPF0181	PF03701.14	gi|284162713|ref|YP_003401336.1|	-	0.17	11.6	0.1	0.34	10.6	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0181)
Adenine_deam_C	PF13382.6	gi|284162714|ref|YP_003401337.1|	-	8.6e-63	210.7	0.4	1.5e-62	209.9	0.4	1.4	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.20	gi|284162714|ref|YP_003401337.1|	-	9.7e-31	107.3	0.0	3.7e-29	102.1	0.0	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|284162714|ref|YP_003401337.1|	-	1.8e-10	40.9	0.1	0.0002	20.9	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
PHP	PF02811.19	gi|284162715|ref|YP_003401338.1|	-	2.3e-12	47.6	0.0	2.3e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	PHP	domain
PHP_C	PF13263.6	gi|284162715|ref|YP_003401338.1|	-	2e-10	40.3	0.0	3.4e-10	39.5	0.0	1.4	1	0	0	1	1	1	1	PHP-associated
MFS_1	PF07690.16	gi|284162716|ref|YP_003401339.1|	-	4.7e-24	85.0	17.9	5.6e-24	84.7	17.9	1.0	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|284162716|ref|YP_003401339.1|	-	3e-13	49.4	13.4	3.9e-13	49.0	13.4	1.2	1	0	0	1	1	1	1	MFS_1	like	family
MFS_3	PF05977.13	gi|284162716|ref|YP_003401339.1|	-	3.1e-08	32.5	6.0	3.6e-08	32.3	6.0	1.0	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Sugar_tr	PF00083.24	gi|284162716|ref|YP_003401339.1|	-	0.00076	18.5	13.8	0.0013	17.7	13.7	1.5	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
UNC-93	PF05978.16	gi|284162716|ref|YP_003401339.1|	-	0.0035	17.1	1.6	0.0043	16.8	1.0	1.5	1	1	0	1	1	1	1	Ion	channel	regulatory	protein	UNC-93
UPF0227	PF05728.12	gi|284162716|ref|YP_003401339.1|	-	0.25	11.3	0.3	0.36	10.8	0.3	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
HD	PF01966.22	gi|284162717|ref|YP_003401340.1|	-	5.4e-17	62.2	1.7	5.4e-17	62.2	1.7	1.7	2	0	0	2	2	2	1	HD	domain
DUF4202	PF13875.6	gi|284162717|ref|YP_003401340.1|	-	0.028	14.3	0.1	0.056	13.3	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4202)
QueF	PF14489.6	gi|284162718|ref|YP_003401341.1|	-	2e-18	66.3	0.2	7.7e-18	64.4	0.1	1.9	2	0	0	2	2	2	1	QueF-like	protein
Nuc_deoxyrib_tr	PF05014.15	gi|284162718|ref|YP_003401341.1|	-	5.8e-06	26.4	0.0	1.1e-05	25.5	0.0	1.4	1	1	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase
Nuc_deoxyri_tr2	PF15891.5	gi|284162718|ref|YP_003401341.1|	-	0.0015	18.8	0.0	0.0024	18.2	0.0	1.4	1	0	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase	like
UDPG_MGDP_dh_C	PF03720.15	gi|284162718|ref|YP_003401341.1|	-	0.027	14.9	0.1	0.057	13.9	0.1	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
LDcluster4	PF18306.1	gi|284162718|ref|YP_003401341.1|	-	0.054	13.1	0.0	0.09	12.4	0.0	1.3	1	0	0	1	1	1	0	SLOG	cluster4	family
FUR	PF01475.19	gi|284162718|ref|YP_003401341.1|	-	0.07	13.3	1.8	7.7	6.7	0.0	2.6	3	0	0	3	3	3	0	Ferric	uptake	regulator	family
GTP_cyclohydroI	PF01227.22	gi|284162718|ref|YP_003401341.1|	-	0.089	12.2	0.0	0.23	10.8	0.0	1.7	2	0	0	2	2	2	0	GTP	cyclohydrolase	I
Saccharop_dh_N	PF04455.12	gi|284162719|ref|YP_003401342.1|	-	3.4e-30	104.4	0.0	7.1e-30	103.4	0.0	1.5	1	0	0	1	1	1	1	LOR/SDH	bifunctional	enzyme	conserved	region
YqfD	PF06898.11	gi|284162719|ref|YP_003401342.1|	-	0.032	13.1	0.0	0.051	12.4	0.0	1.2	1	0	0	1	1	1	0	Putative	stage	IV	sporulation	protein	YqfD
AMP-binding_C_2	PF14535.6	gi|284162720|ref|YP_003401343.1|	-	1.4e-31	108.7	0.5	1.3e-30	105.5	0.5	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|284162720|ref|YP_003401343.1|	-	1.2e-20	73.6	1.3	4.1e-19	68.5	1.3	2.1	1	1	0	1	1	1	1	AMP-binding	enzyme
GH3	PF03321.13	gi|284162720|ref|YP_003401343.1|	-	0.0013	17.7	0.0	0.28	10.0	0.0	2.1	2	0	0	2	2	2	2	GH3	auxin-responsive	promoter
LuxE	PF04443.12	gi|284162720|ref|YP_003401343.1|	-	0.0065	15.5	0.0	0.013	14.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-protein	synthetase,	LuxE
IF2_N	PF04760.15	gi|284162721|ref|YP_003401344.1|	-	0.017	15.0	0.2	7.7	6.4	0.1	2.4	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
HSDR_N_2	PF13588.6	gi|284162721|ref|YP_003401344.1|	-	0.036	14.1	0.1	0.082	12.9	0.1	1.5	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
DUF1892	PF08987.10	gi|284162721|ref|YP_003401344.1|	-	1.1	9.5	5.3	7.2	6.8	0.8	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1892)
ACT	PF01842.25	gi|284162722|ref|YP_003401345.1|	-	3.4e-17	61.9	0.0	7.5e-09	35.2	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|284162722|ref|YP_003401345.1|	-	3.6e-08	33.9	0.0	0.0084	16.7	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_7	PF13840.6	gi|284162722|ref|YP_003401345.1|	-	3.9e-05	23.4	0.0	0.49	10.2	0.0	3.0	1	1	0	2	2	2	2	ACT	domain
ACT_6	PF13740.6	gi|284162722|ref|YP_003401345.1|	-	0.014	15.4	0.0	2.1	8.4	0.0	2.3	1	1	0	2	2	2	0	ACT	domain
DUF2103	PF09876.9	gi|284162723|ref|YP_003401346.1|	-	2.2e-37	127.0	0.1	3.3e-37	126.4	0.1	1.3	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2103)
HTH_3	PF01381.22	gi|284162724|ref|YP_003401347.1|	-	3.9e-14	52.4	1.9	6.1e-14	51.8	1.9	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|284162724|ref|YP_003401347.1|	-	5.6e-10	39.4	0.1	8.3e-10	38.9	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|284162724|ref|YP_003401347.1|	-	2.3e-09	37.1	2.0	4.9e-09	36.1	2.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|284162724|ref|YP_003401347.1|	-	0.00081	19.2	1.6	0.00081	19.2	1.6	2.0	1	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|284162724|ref|YP_003401347.1|	-	0.085	12.8	0.4	0.18	11.8	0.3	1.7	1	1	1	2	2	2	0	Helix-turn-helix	domain
AAA	PF00004.29	gi|284162725|ref|YP_003401348.1|	-	2.3e-45	154.3	0.0	5.3e-45	153.1	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|284162725|ref|YP_003401348.1|	-	7.8e-17	60.8	0.3	2e-16	59.5	0.3	1.8	1	0	0	1	1	1	1	AAA+	lid	domain
Prot_ATP_ID_OB	PF16450.5	gi|284162725|ref|YP_003401348.1|	-	7.6e-16	57.8	0.2	1.7e-15	56.7	0.2	1.6	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_2	PF07724.14	gi|284162725|ref|YP_003401348.1|	-	4.7e-08	33.3	0.0	1.2e-07	32.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
Prot_ATP_OB_N	PF17758.1	gi|284162725|ref|YP_003401348.1|	-	1.2e-06	28.1	0.0	3.3e-06	26.7	0.0	1.8	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	N-terminal	domain
AAA_16	PF13191.6	gi|284162725|ref|YP_003401348.1|	-	1.4e-06	28.8	2.3	0.00022	21.7	0.0	3.0	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|284162725|ref|YP_003401348.1|	-	7.1e-06	26.1	0.1	4.5e-05	23.5	0.1	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.12	gi|284162725|ref|YP_003401348.1|	-	3.8e-05	23.5	0.0	0.0001	22.1	0.0	1.7	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|284162725|ref|YP_003401348.1|	-	6.9e-05	23.1	0.5	0.0058	16.9	0.1	2.6	1	1	1	2	2	2	1	AAA	domain
DUF815	PF05673.13	gi|284162725|ref|YP_003401348.1|	-	8.3e-05	21.9	0.0	0.00016	21.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.22	gi|284162725|ref|YP_003401348.1|	-	0.00052	20.4	0.0	0.002	18.5	0.0	2.0	2	0	0	2	2	1	1	RNA	helicase
AAA_28	PF13521.6	gi|284162725|ref|YP_003401348.1|	-	0.0011	19.3	1.8	0.0016	18.7	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|284162725|ref|YP_003401348.1|	-	0.0027	17.5	0.0	0.0073	16.1	0.0	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|284162725|ref|YP_003401348.1|	-	0.0028	17.8	0.0	0.0064	16.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|284162725|ref|YP_003401348.1|	-	0.0045	16.2	0.0	0.0072	15.6	0.0	1.2	1	0	0	1	1	1	1	TIP49	P-loop	domain
ATPase_2	PF01637.18	gi|284162725|ref|YP_003401348.1|	-	0.0064	16.4	0.1	0.28	11.1	0.0	2.5	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_18	PF13238.6	gi|284162725|ref|YP_003401348.1|	-	0.0093	16.5	0.0	0.0093	16.5	0.0	2.4	2	1	0	2	2	1	1	AAA	domain
Mg_chelatase	PF01078.21	gi|284162725|ref|YP_003401348.1|	-	0.0096	15.3	0.1	0.018	14.4	0.1	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
NTPase_1	PF03266.15	gi|284162725|ref|YP_003401348.1|	-	0.012	15.6	1.0	0.057	13.3	0.0	2.5	3	0	0	3	3	3	0	NTPase
AAA_24	PF13479.6	gi|284162725|ref|YP_003401348.1|	-	0.012	15.4	0.0	0.024	14.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|284162725|ref|YP_003401348.1|	-	0.013	15.0	0.0	0.026	14.0	0.0	1.6	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_14	PF13173.6	gi|284162725|ref|YP_003401348.1|	-	0.013	15.5	0.0	0.029	14.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_3	PF07726.11	gi|284162725|ref|YP_003401348.1|	-	0.023	14.6	0.0	0.041	13.7	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_11	PF13086.6	gi|284162725|ref|YP_003401348.1|	-	0.03	14.1	0.3	0.71	9.6	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Sigma54_activat	PF00158.26	gi|284162725|ref|YP_003401348.1|	-	0.035	13.8	0.0	0.12	12.1	0.0	1.9	2	0	0	2	2	1	0	Sigma-54	interaction	domain
ATPase	PF06745.13	gi|284162725|ref|YP_003401348.1|	-	0.037	13.4	1.6	0.13	11.6	0.0	2.4	2	1	1	3	3	3	0	KaiC
DHR10	PF18595.1	gi|284162725|ref|YP_003401348.1|	-	0.048	13.7	7.7	0.032	14.3	6.2	1.5	2	0	0	2	2	1	0	Designed	helical	repeat	protein	10	domain
AAA_25	PF13481.6	gi|284162725|ref|YP_003401348.1|	-	0.049	13.2	0.8	0.76	9.3	0.2	2.5	1	1	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|284162725|ref|YP_003401348.1|	-	0.052	12.7	0.0	0.13	11.5	0.0	1.7	2	0	0	2	2	1	0	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|284162725|ref|YP_003401348.1|	-	0.056	12.7	0.0	0.13	11.5	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
TsaE	PF02367.17	gi|284162725|ref|YP_003401348.1|	-	0.058	13.4	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Parvo_NS1	PF01057.17	gi|284162725|ref|YP_003401348.1|	-	0.058	12.5	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_30	PF13604.6	gi|284162725|ref|YP_003401348.1|	-	0.068	12.9	0.0	0.16	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|284162725|ref|YP_003401348.1|	-	0.077	12.9	0.2	0.48	10.3	0.1	2.1	2	0	0	2	2	2	0	NACHT	domain
PCRF	PF03462.18	gi|284162725|ref|YP_003401348.1|	-	0.093	12.6	0.6	0.2	11.5	0.2	1.7	2	0	0	2	2	2	0	PCRF	domain
PhoH	PF02562.16	gi|284162725|ref|YP_003401348.1|	-	0.11	12.0	0.1	0.2	11.1	0.1	1.4	1	0	0	1	1	1	0	PhoH-like	protein
APG6_N	PF17675.1	gi|284162725|ref|YP_003401348.1|	-	0.12	12.8	10.3	0.32	11.5	10.3	1.6	1	0	0	1	1	1	0	Apg6	coiled-coil	region
AAA_13	PF13166.6	gi|284162725|ref|YP_003401348.1|	-	0.13	10.9	0.9	9.7	4.7	1.0	2.3	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|284162725|ref|YP_003401348.1|	-	0.19	12.2	0.0	0.6	10.6	0.0	1.9	1	0	0	1	1	1	0	ABC	transporter
KASH_CCD	PF14662.6	gi|284162725|ref|YP_003401348.1|	-	0.26	11.1	4.8	0.57	10.0	4.8	1.5	1	0	0	1	1	1	0	Coiled-coil	region	of	CCDC155	or	KASH
ERM	PF00769.19	gi|284162725|ref|YP_003401348.1|	-	0.33	10.7	7.2	0.56	10.0	7.2	1.3	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
SAS4	PF15460.6	gi|284162725|ref|YP_003401348.1|	-	0.67	10.1	7.3	0.54	10.4	4.4	2.2	1	1	1	2	2	2	0	Something	about	silencing,	SAS,	complex	subunit	4
Troponin	PF00992.20	gi|284162725|ref|YP_003401348.1|	-	3.7	7.9	11.4	8.5	6.7	11.4	1.5	1	0	0	1	1	1	0	Troponin
LCD1	PF09798.9	gi|284162725|ref|YP_003401348.1|	-	3.8	5.9	5.3	8.3	4.8	5.3	1.5	1	0	0	1	1	1	0	DNA	damage	checkpoint	protein
RHH_1	PF01402.21	gi|284162726|ref|YP_003401349.1|	-	0.019	14.9	4.0	0.036	14.0	0.0	3.0	3	1	1	4	4	4	0	Ribbon-helix-helix	protein,	copG	family
RHH_5	PF07878.11	gi|284162726|ref|YP_003401349.1|	-	0.025	14.4	0.0	0.063	13.2	0.0	1.7	1	0	0	1	1	1	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
CopG_antitoxin	PF12441.8	gi|284162726|ref|YP_003401349.1|	-	0.088	13.4	0.1	6.4	7.4	0.0	2.4	2	0	0	2	2	2	0	CopG	antitoxin	of	type	II	toxin-antitoxin	system
MreB_Mbl	PF06723.13	gi|284162727|ref|YP_003401350.1|	-	1.2e-19	70.4	0.6	2.1e-18	66.3	0.6	2.0	1	1	0	1	1	1	1	MreB/Mbl	protein
ALP_N	PF17989.1	gi|284162727|ref|YP_003401350.1|	-	8.2e-12	45.5	0.0	8.2e-12	45.5	0.0	2.3	3	0	0	3	3	3	1	Actin	like	proteins	N	terminal	domain
Actin	PF00022.19	gi|284162727|ref|YP_003401350.1|	-	7.9e-10	37.9	0.4	1.2e-05	24.2	0.2	2.2	1	1	1	2	2	2	2	Actin
FtsA	PF14450.6	gi|284162727|ref|YP_003401350.1|	-	0.13	12.6	0.1	0.43	11.0	0.0	2.0	2	1	0	2	2	2	0	Cell	division	protein	FtsA
Amidohydro_1	PF01979.20	gi|284162728|ref|YP_003401351.1|	-	1.3e-17	64.1	0.0	1.8e-17	63.7	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|284162728|ref|YP_003401351.1|	-	0.00011	21.8	0.0	0.013	15.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Radical_SAM	PF04055.21	gi|284162729|ref|YP_003401352.1|	-	1.7e-14	54.6	0.1	2.7e-14	53.9	0.1	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|284162729|ref|YP_003401352.1|	-	0.00047	20.3	0.1	0.0012	19.0	0.1	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|284162729|ref|YP_003401352.1|	-	0.0067	16.9	0.8	0.019	15.4	0.8	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
RuBisCO_large	PF00016.20	gi|284162730|ref|YP_003401353.1|	-	1.7e-100	336.1	0.3	2.3e-100	335.7	0.3	1.1	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
RuBisCO_large_N	PF02788.16	gi|284162730|ref|YP_003401353.1|	-	1.2e-47	161.0	0.0	2.8e-47	159.8	0.0	1.6	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
DUF5395	PF17373.2	gi|284162731|ref|YP_003401354.1|	-	2.9e-32	111.2	0.1	3.2e-32	111.0	0.1	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5395)
zf-RING_7	PF02591.15	gi|284162732|ref|YP_003401355.1|	-	2e-05	24.7	1.5	0.039	14.1	0.2	2.3	2	0	0	2	2	2	2	C4-type	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|284162732|ref|YP_003401355.1|	-	0.00012	21.4	2.7	0.053	13.0	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|284162732|ref|YP_003401355.1|	-	0.00016	21.1	2.5	0.00025	20.5	2.5	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf_Rg	PF17915.1	gi|284162732|ref|YP_003401355.1|	-	0.00048	19.5	0.4	0.15	11.5	0.1	2.2	2	0	0	2	2	2	1	Reverse	gyrase	zinc	finger
Zn_Tnp_IS1595	PF12760.7	gi|284162732|ref|YP_003401355.1|	-	0.00057	19.8	0.3	0.0009	19.2	0.3	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|284162732|ref|YP_003401355.1|	-	0.00099	19.0	0.5	0.0047	16.9	0.5	1.9	1	1	0	1	1	1	1	PhnA	Zinc-Ribbon
zinc_ribbon_4	PF13717.6	gi|284162732|ref|YP_003401355.1|	-	0.001	18.9	0.6	0.24	11.3	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
DUF1610	PF07754.11	gi|284162732|ref|YP_003401355.1|	-	0.0011	18.8	4.3	0.34	10.9	0.0	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
zf-IS66	PF13005.7	gi|284162732|ref|YP_003401355.1|	-	0.0014	19.0	1.8	0.57	10.6	0.1	2.2	1	1	1	2	2	2	2	zinc-finger	binding	domain	of	transposase	IS66
zinc_ribbon_2	PF13240.6	gi|284162732|ref|YP_003401355.1|	-	0.0017	18.0	5.4	0.25	11.1	0.6	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|284162732|ref|YP_003401355.1|	-	0.003	17.6	2.9	0.019	15.1	2.9	2.0	1	1	1	2	2	2	2	Zinc	ribbon	domain
DZR	PF12773.7	gi|284162732|ref|YP_003401355.1|	-	0.0035	17.3	1.2	0.0069	16.4	1.2	1.5	1	1	0	1	1	1	1	Double	zinc	ribbon
Ogr_Delta	PF04606.12	gi|284162732|ref|YP_003401355.1|	-	0.0039	17.1	0.2	2.8	8.0	0.0	2.3	2	0	0	2	2	2	1	Ogr/Delta-like	zinc	finger
zf-ISL3	PF14690.6	gi|284162732|ref|YP_003401355.1|	-	0.0045	17.6	2.7	1.7	9.4	0.1	2.2	1	1	1	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Anti-TRAP	PF15777.5	gi|284162732|ref|YP_003401355.1|	-	0.0083	16.1	0.5	0.011	15.6	0.5	1.2	1	0	0	1	1	1	1	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
OrfB_Zn_ribbon	PF07282.11	gi|284162732|ref|YP_003401355.1|	-	0.0096	15.8	0.8	0.015	15.2	0.8	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF35_N	PF12172.8	gi|284162732|ref|YP_003401355.1|	-	0.013	15.4	1.3	3.6	7.5	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Auto_anti-p27	PF06677.12	gi|284162732|ref|YP_003401355.1|	-	0.015	15.5	1.9	0.026	14.7	1.9	1.4	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
HypA	PF01155.19	gi|284162732|ref|YP_003401355.1|	-	0.015	15.3	0.5	0.02	14.9	0.5	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
ADK_lid	PF05191.14	gi|284162732|ref|YP_003401355.1|	-	0.015	15.3	0.6	1.4	8.9	0.0	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-NADH-PPase	PF09297.11	gi|284162732|ref|YP_003401355.1|	-	0.02	14.5	2.3	0.61	9.8	0.1	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Sgf11	PF08209.11	gi|284162732|ref|YP_003401355.1|	-	0.032	13.8	5.0	0.22	11.1	0.3	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-tcix	PF14952.6	gi|284162732|ref|YP_003401355.1|	-	0.033	13.8	1.8	5.2	6.8	0.1	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
CpXC	PF14353.6	gi|284162732|ref|YP_003401355.1|	-	0.035	14.1	1.4	4.7	7.3	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
DNA_RNApol_7kD	PF03604.13	gi|284162732|ref|YP_003401355.1|	-	0.047	13.4	2.9	0.14	11.9	2.7	1.9	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_9	PF14369.6	gi|284162732|ref|YP_003401355.1|	-	0.047	13.9	0.5	6.6	7.1	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon
Lar_restr_allev	PF14354.6	gi|284162732|ref|YP_003401355.1|	-	0.053	13.9	1.2	0.11	12.9	1.2	1.5	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-C4_Topoisom	PF01396.19	gi|284162732|ref|YP_003401355.1|	-	0.056	13.2	1.1	2.7	7.8	0.1	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
IBR	PF01485.21	gi|284162732|ref|YP_003401355.1|	-	0.057	13.7	0.2	0.071	13.3	0.2	1.2	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Prim_Zn_Ribbon	PF08273.12	gi|284162732|ref|YP_003401355.1|	-	0.062	13.6	2.6	7.2	7.0	0.2	2.1	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
A2L_zn_ribbon	PF08792.10	gi|284162732|ref|YP_003401355.1|	-	0.074	12.8	0.3	11	5.9	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
YacG	PF03884.14	gi|284162732|ref|YP_003401355.1|	-	0.08	12.7	0.3	3.6	7.4	0.0	2.1	2	0	0	2	2	2	0	DNA	gyrase	inhibitor	YacG
zf-C2H2_11	PF16622.5	gi|284162732|ref|YP_003401355.1|	-	0.082	12.7	0.3	0.23	11.2	0.0	1.8	2	0	0	2	2	2	0	zinc-finger	C2H2-type
TackOD1	PF18551.1	gi|284162732|ref|YP_003401355.1|	-	0.084	12.5	0.1	0.1	12.3	0.1	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
zf-TFIIB	PF13453.6	gi|284162732|ref|YP_003401355.1|	-	0.11	11.9	2.3	0.28	10.5	2.6	1.6	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
Elf1	PF05129.13	gi|284162732|ref|YP_003401355.1|	-	0.11	12.5	0.2	0.15	12.1	0.2	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Ribosomal_L32p	PF01783.23	gi|284162732|ref|YP_003401355.1|	-	0.13	12.5	0.4	14	6.1	0.0	2.1	2	0	0	2	2	2	0	Ribosomal	L32p	protein	family
zf-HYPF	PF07503.12	gi|284162732|ref|YP_003401355.1|	-	0.14	12.0	3.9	1.7	8.5	0.2	2.2	2	0	0	2	2	2	0	HypF	finger
DUF983	PF06170.12	gi|284162732|ref|YP_003401355.1|	-	0.14	12.6	4.2	0.58	10.6	0.4	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF983)
zf-RRN7	PF11781.8	gi|284162732|ref|YP_003401355.1|	-	0.2	11.4	5.1	2.7	7.8	0.3	2.2	1	1	1	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Trm112p	PF03966.16	gi|284162732|ref|YP_003401355.1|	-	0.21	12.2	2.5	0.27	11.8	0.1	1.9	1	1	1	2	2	2	0	Trm112p-like	protein
Zn_ribbon_SprT	PF17283.2	gi|284162732|ref|YP_003401355.1|	-	0.22	11.5	3.9	0.87	9.6	0.5	2.1	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
DUF3797	PF12677.7	gi|284162732|ref|YP_003401355.1|	-	0.24	11.3	4.4	0.59	10.1	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zf-C2HC_2	PF13913.6	gi|284162732|ref|YP_003401355.1|	-	0.3	11.0	6.9	0.68	9.9	0.6	2.2	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-LITAF-like	PF10601.9	gi|284162732|ref|YP_003401355.1|	-	0.36	11.1	5.2	7.4	6.9	0.9	2.6	1	1	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
zf_CopZ	PF18423.1	gi|284162732|ref|YP_003401355.1|	-	0.42	10.6	2.4	7	6.7	0.1	2.2	1	1	1	2	2	2	0	Zinc	binding	domain
zf-C2H2_3	PF13878.6	gi|284162732|ref|YP_003401355.1|	-	0.45	10.4	4.0	5.3	6.9	0.2	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
DUF1272	PF06906.11	gi|284162732|ref|YP_003401355.1|	-	0.5	10.5	5.1	7	6.8	0.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
Rubredoxin_2	PF18073.1	gi|284162732|ref|YP_003401355.1|	-	0.7	9.7	4.1	9.8	6.0	0.4	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Mu-like_Com	PF10122.9	gi|284162732|ref|YP_003401355.1|	-	0.88	9.1	3.5	7.3	6.1	0.1	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
zf-RING_4	PF14570.6	gi|284162732|ref|YP_003401355.1|	-	1.5	8.7	6.8	1	9.2	0.5	2.1	1	1	1	2	2	2	0	RING/Ubox	like	zinc-binding	domain
DNA_ligase_ZBD	PF03119.16	gi|284162732|ref|YP_003401355.1|	-	1.6	8.8	8.7	0.34	11.0	4.3	2.2	2	1	0	2	2	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF2614	PF11023.8	gi|284162732|ref|YP_003401355.1|	-	5.8	7.0	6.2	3.1	7.9	0.1	2.6	1	1	2	3	3	3	0	Zinc-ribbon	containing	domain
Cons_hypoth698	PF03601.14	gi|284162733|ref|YP_003401356.1|	-	1.1e-22	80.3	10.7	1.1e-22	80.3	10.7	1.4	1	1	0	1	1	1	1	Conserved	hypothetical	protein	698
V-ATPase_G_2	PF16999.5	gi|284162734|ref|YP_003401357.1|	-	4.4e-11	43.1	20.7	5.1e-11	42.9	20.7	1.0	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|284162734|ref|YP_003401357.1|	-	1.1e-09	38.4	20.6	1.3e-09	38.2	20.6	1.1	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
DUF3552	PF12072.8	gi|284162734|ref|YP_003401357.1|	-	6.4e-05	22.5	22.6	6.4e-05	22.5	22.6	1.8	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF3552)
Apolipoprotein	PF01442.18	gi|284162734|ref|YP_003401357.1|	-	0.0043	17.0	9.0	0.0051	16.7	9.0	1.1	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DivIVA	PF05103.13	gi|284162734|ref|YP_003401357.1|	-	0.0064	16.6	20.5	0.0083	16.2	20.3	1.4	1	1	0	1	1	1	1	DivIVA	protein
Ribosomal_L22	PF00237.19	gi|284162734|ref|YP_003401357.1|	-	0.0069	16.6	7.5	0.0086	16.3	7.5	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Baculo_PEP_C	PF04513.12	gi|284162734|ref|YP_003401357.1|	-	0.0073	16.3	0.9	0.01	15.8	0.9	1.3	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
V-ATPase_G	PF03179.15	gi|284162734|ref|YP_003401357.1|	-	0.0092	16.5	22.0	0.011	16.3	22.0	1.1	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
Phage_min_cap2	PF06152.11	gi|284162734|ref|YP_003401357.1|	-	0.011	14.7	10.7	0.013	14.5	10.7	1.1	1	0	0	1	1	1	0	Phage	minor	capsid	protein	2
Aldedh	PF00171.22	gi|284162734|ref|YP_003401357.1|	-	0.014	13.9	7.3	0.015	13.9	7.3	1.0	1	0	0	1	1	1	0	Aldehyde	dehydrogenase	family
HrpE	PF06188.12	gi|284162734|ref|YP_003401357.1|	-	0.015	15.2	4.6	0.017	15.0	4.6	1.1	1	0	0	1	1	1	0	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
FANCI_S2	PF14676.6	gi|284162734|ref|YP_003401357.1|	-	0.02	15.2	2.2	0.022	15.1	2.2	1.1	1	0	0	1	1	1	0	FANCI	solenoid	2
PRESAN	PF09687.10	gi|284162734|ref|YP_003401357.1|	-	0.05	14.2	4.3	0.05	14.2	4.3	2.0	1	1	1	2	2	2	0	Plasmodium	RESA	N-terminal
RepB_primase	PF16793.5	gi|284162734|ref|YP_003401357.1|	-	0.074	13.2	1.9	0.09	12.9	1.7	1.4	1	1	1	2	2	2	0	RepB	DNA-primase	from	phage	plasmid
PhaP_Bmeg	PF09602.10	gi|284162734|ref|YP_003401357.1|	-	0.088	12.7	10.8	0.11	12.5	10.8	1.1	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
AAA_assoc_C	PF09821.9	gi|284162734|ref|YP_003401357.1|	-	0.11	13.1	5.7	0.13	12.8	5.7	1.1	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
PIN_8	PF18476.1	gi|284162734|ref|YP_003401357.1|	-	0.17	11.7	10.7	0.19	11.5	10.7	1.1	1	0	0	1	1	1	0	PIN	like	domain
DUF3347	PF11827.8	gi|284162734|ref|YP_003401357.1|	-	0.17	12.1	8.2	0.21	11.8	8.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
Exonuc_VII_L	PF02601.15	gi|284162734|ref|YP_003401357.1|	-	0.18	11.3	5.5	0.22	11.1	5.5	1.0	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF883	PF05957.13	gi|284162734|ref|YP_003401357.1|	-	0.22	12.1	9.7	2.6	8.7	8.2	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
HIP1_clath_bdg	PF16515.5	gi|284162734|ref|YP_003401357.1|	-	0.25	12.0	14.6	0.91	10.2	14.8	1.8	1	1	0	1	1	1	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
ParB	PF08775.10	gi|284162734|ref|YP_003401357.1|	-	0.27	11.7	13.0	0.36	11.3	13.0	1.2	1	0	0	1	1	1	0	ParB	family
His_Phos_2	PF00328.22	gi|284162734|ref|YP_003401357.1|	-	0.33	10.3	3.6	0.37	10.1	3.6	1.0	1	0	0	1	1	1	0	Histidine	phosphatase	superfamily	(branch	2)
CbiN	PF02553.15	gi|284162734|ref|YP_003401357.1|	-	0.51	10.3	2.5	0.58	10.2	1.3	1.8	2	1	0	2	2	1	0	Cobalt	transport	protein	component	CbiN
RapA_C	PF12137.8	gi|284162734|ref|YP_003401357.1|	-	0.56	9.2	10.2	0.74	8.8	10.2	1.4	1	1	0	1	1	1	0	RNA	polymerase	recycling	family	C-terminal
FtsA	PF14450.6	gi|284162734|ref|YP_003401357.1|	-	0.66	10.4	8.3	1	9.8	8.3	1.5	1	1	0	1	1	1	0	Cell	division	protein	FtsA
EntA_Immun	PF08951.10	gi|284162734|ref|YP_003401357.1|	-	0.67	10.3	10.6	0.84	10.0	4.4	2.2	1	1	1	2	2	2	0	Enterocin	A	Immunity
Prominin	PF05478.11	gi|284162734|ref|YP_003401357.1|	-	0.81	7.6	7.4	0.86	7.5	7.4	1.1	1	0	0	1	1	1	0	Prominin
vATP-synt_E	PF01991.18	gi|284162734|ref|YP_003401357.1|	-	1	8.7	32.5	0.62	9.4	27.6	2.0	1	1	1	2	2	2	0	ATP	synthase	(E/31	kDa)	subunit
ISG65-75	PF11727.8	gi|284162734|ref|YP_003401357.1|	-	1.1	8.4	18.4	1.4	8.1	18.4	1.2	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
Myb_Cef	PF11831.8	gi|284162734|ref|YP_003401357.1|	-	1.5	8.4	13.7	3.6	7.1	13.7	1.6	1	1	0	1	1	1	0	pre-mRNA	splicing	factor	component
Peptidase_M41	PF01434.18	gi|284162734|ref|YP_003401357.1|	-	1.6	8.6	10.5	1.1	9.0	8.7	1.6	1	1	1	2	2	2	0	Peptidase	family	M41
TMPIT	PF07851.13	gi|284162734|ref|YP_003401357.1|	-	2.1	7.5	11.2	2.5	7.3	11.2	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
dCache_2	PF08269.11	gi|284162734|ref|YP_003401357.1|	-	2.3	7.3	14.5	0.14	11.3	6.7	1.9	1	1	1	2	2	2	0	Cache	domain
Borrelia_P83	PF05262.11	gi|284162734|ref|YP_003401357.1|	-	2.7	6.4	19.3	3.2	6.1	19.3	1.0	1	0	0	1	1	1	0	Borrelia	P83/100	protein
Prefoldin	PF02996.17	gi|284162734|ref|YP_003401357.1|	-	2.7	7.9	20.3	0.91	9.5	10.6	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
Mitofilin	PF09731.9	gi|284162734|ref|YP_003401357.1|	-	2.9	6.6	21.4	3.4	6.4	21.4	1.1	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
EPOP	PF15223.6	gi|284162734|ref|YP_003401357.1|	-	3.9	6.7	10.7	4.4	6.6	10.7	1.0	1	0	0	1	1	1	0	Elongin	BC	and	Polycomb	repressive	complex	2-associated	protein
AAA_11	PF13086.6	gi|284162734|ref|YP_003401357.1|	-	4.1	7.1	12.6	4.5	7.0	12.6	1.1	1	0	0	1	1	1	0	AAA	domain
RAP1	PF07218.11	gi|284162734|ref|YP_003401357.1|	-	4.3	5.5	15.5	4.9	5.3	15.5	1.0	1	0	0	1	1	1	0	Rhoptry-associated	protein	1	(RAP-1)
Mgr1	PF08602.10	gi|284162734|ref|YP_003401357.1|	-	4.4	6.0	8.3	5.1	5.8	8.3	1.2	1	0	0	1	1	1	0	Mgr1-like,	i-AAA	protease	complex	subunit
DUF737	PF05300.11	gi|284162734|ref|YP_003401357.1|	-	4.7	7.5	19.5	6	7.2	19.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF737)
YtxH	PF12732.7	gi|284162734|ref|YP_003401357.1|	-	4.9	7.8	20.9	6.7e+02	0.9	20.9	2.2	1	1	0	1	1	1	0	YtxH-like	protein
RNase_J_C	PF17770.1	gi|284162734|ref|YP_003401357.1|	-	4.9	8.3	14.8	8.5	7.5	8.5	2.6	1	1	1	2	2	2	0	Ribonuclease	J	C-terminal	domain
hDGE_amylase	PF14701.6	gi|284162734|ref|YP_003401357.1|	-	4.9	6.1	9.3	5.5	6.0	9.3	1.1	1	0	0	1	1	1	0	Glycogen	debranching	enzyme,	glucanotransferase	domain
Tho2	PF11262.8	gi|284162734|ref|YP_003401357.1|	-	5.1	6.2	12.0	6.1	6.0	12.0	1.1	1	0	0	1	1	1	0	Transcription	factor/nuclear	export	subunit	protein	2
Clathrin_lg_ch	PF01086.17	gi|284162734|ref|YP_003401357.1|	-	5.4	7.0	18.7	6.6	6.7	18.7	1.1	1	0	0	1	1	1	0	Clathrin	light	chain
HSP70	PF00012.20	gi|284162734|ref|YP_003401357.1|	-	5.6	5.0	16.9	6.1	4.9	16.9	1.0	1	0	0	1	1	1	0	Hsp70	protein
CENP-H	PF05837.12	gi|284162734|ref|YP_003401357.1|	-	6.4	7.2	17.5	8.4	6.8	17.5	1.3	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
DUF262	PF03235.14	gi|284162734|ref|YP_003401357.1|	-	6.9	6.8	9.3	8	6.6	9.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF262
tRNA-synt_1b	PF00579.25	gi|284162734|ref|YP_003401357.1|	-	8.2	5.7	10.1	9.1	5.5	10.1	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(W	and	Y)
RRF	PF01765.19	gi|284162734|ref|YP_003401357.1|	-	9.3	6.2	22.1	13	5.7	6.2	2.0	1	1	1	2	2	2	0	Ribosome	recycling	factor
Mt_ATP-synt_D	PF05873.12	gi|284162734|ref|YP_003401357.1|	-	9.4	6.1	21.8	2	8.2	9.7	2.1	1	1	1	2	2	2	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
V_ATPase_I	PF01496.19	gi|284162735|ref|YP_003401358.1|	-	3.9e-28	97.9	7.4	1.2e-18	66.5	0.0	3.2	3	0	0	3	3	3	2	V-type	ATPase	116kDa	subunit	family
Snapin_Pallidin	PF14712.6	gi|284162735|ref|YP_003401358.1|	-	6.5e-05	23.3	2.4	0.0036	17.7	0.3	2.5	2	0	0	2	2	2	1	Snapin/Pallidin
Fib_alpha	PF08702.10	gi|284162735|ref|YP_003401358.1|	-	0.00034	20.8	2.3	0.053	13.7	0.1	2.2	2	0	0	2	2	2	1	Fibrinogen	alpha/beta	chain	family
SHE3	PF17078.5	gi|284162735|ref|YP_003401358.1|	-	0.0072	16.1	2.4	0.36	10.5	0.0	2.1	2	0	0	2	2	2	1	SWI5-dependent	HO	expression	protein	3
APG6_N	PF17675.1	gi|284162735|ref|YP_003401358.1|	-	0.0078	16.7	10.8	0.19	12.2	2.0	2.2	2	0	0	2	2	2	2	Apg6	coiled-coil	region
Seryl_tRNA_N	PF02403.22	gi|284162735|ref|YP_003401358.1|	-	0.0094	16.2	8.2	0.22	11.8	0.7	2.3	2	0	0	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
Spc24	PF08286.11	gi|284162735|ref|YP_003401358.1|	-	0.017	15.3	3.1	2.6	8.3	0.4	2.3	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
DUF4618	PF15397.6	gi|284162735|ref|YP_003401358.1|	-	0.021	14.3	0.8	2.3	7.5	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
Spc7	PF08317.11	gi|284162735|ref|YP_003401358.1|	-	0.026	13.4	9.5	0.29	10.0	2.3	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
COG2	PF06148.11	gi|284162735|ref|YP_003401358.1|	-	0.027	14.6	1.2	7.1	6.7	0.2	2.4	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
FliJ	PF02050.16	gi|284162735|ref|YP_003401358.1|	-	0.029	14.6	1.2	3.1	8.1	0.3	2.2	2	0	0	2	2	2	0	Flagellar	FliJ	protein
OmpH	PF03938.14	gi|284162735|ref|YP_003401358.1|	-	0.053	13.9	5.8	1.2	9.5	1.2	2.3	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
MAP65_ASE1	PF03999.12	gi|284162735|ref|YP_003401358.1|	-	0.06	12.1	2.5	0.13	10.9	2.5	1.4	1	1	0	1	1	1	0	Microtubule	associated	protein	(MAP65/ASE1	family)
Mod_r	PF07200.13	gi|284162735|ref|YP_003401358.1|	-	0.062	13.4	3.6	2.4	8.3	0.7	2.2	2	0	0	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
COG5	PF10392.9	gi|284162735|ref|YP_003401358.1|	-	0.065	13.4	2.3	13	6.0	0.1	2.8	2	1	1	3	3	3	0	Golgi	transport	complex	subunit	5
DivIC	PF04977.15	gi|284162735|ref|YP_003401358.1|	-	0.076	12.8	6.2	0.26	11.1	0.1	2.5	2	0	0	2	2	2	0	Septum	formation	initiator
Phage_Mu_Gam	PF07352.12	gi|284162735|ref|YP_003401358.1|	-	0.084	12.8	3.6	3.5	7.5	0.0	2.4	2	0	0	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
DUF4140	PF13600.6	gi|284162735|ref|YP_003401358.1|	-	0.091	13.2	3.2	4.4	7.8	0.3	2.3	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
NPV_P10	PF05531.12	gi|284162735|ref|YP_003401358.1|	-	0.098	13.1	0.1	3.3	8.2	0.0	2.4	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
TMF_TATA_bd	PF12325.8	gi|284162735|ref|YP_003401358.1|	-	0.14	12.4	7.9	0.39	11.0	3.0	2.2	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
DUF1664	PF07889.12	gi|284162735|ref|YP_003401358.1|	-	0.16	12.0	2.7	6.6	6.8	0.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Lebercilin	PF15619.6	gi|284162735|ref|YP_003401358.1|	-	0.16	11.6	5.9	1.4	8.5	0.8	2.1	2	0	0	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Lysozyme_like	PF13702.6	gi|284162735|ref|YP_003401358.1|	-	0.17	11.6	0.1	0.33	10.6	0.1	1.4	1	0	0	1	1	1	0	Lysozyme-like
BST2	PF16716.5	gi|284162735|ref|YP_003401358.1|	-	0.17	12.5	5.3	1.5	9.5	0.7	2.2	2	0	0	2	2	2	0	Bone	marrow	stromal	antigen	2
Swi5	PF07061.11	gi|284162735|ref|YP_003401358.1|	-	0.18	11.9	3.7	7.9	6.6	1.3	2.5	2	0	0	2	2	2	0	Swi5
Tektin	PF03148.14	gi|284162735|ref|YP_003401358.1|	-	0.21	10.3	8.8	1.2	7.8	0.3	2.1	2	0	0	2	2	2	0	Tektin	family
Fez1	PF06818.15	gi|284162735|ref|YP_003401358.1|	-	0.22	11.9	4.3	5.4	7.4	0.4	2.1	2	0	0	2	2	2	0	Fez1
Exonuc_VII_L	PF02601.15	gi|284162735|ref|YP_003401358.1|	-	0.25	10.9	0.1	1.3	8.5	0.0	1.8	2	0	0	2	2	2	0	Exonuclease	VII,	large	subunit
ZapB	PF06005.12	gi|284162735|ref|YP_003401358.1|	-	0.35	11.4	10.0	3.6	8.1	1.1	2.3	2	0	0	2	2	2	0	Cell	division	protein	ZapB
DUF724	PF05266.14	gi|284162735|ref|YP_003401358.1|	-	0.35	10.7	4.5	0.73	9.6	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
DUF812	PF05667.11	gi|284162735|ref|YP_003401358.1|	-	0.36	9.7	7.1	1.7	7.5	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF812)
DUF4200	PF13863.6	gi|284162735|ref|YP_003401358.1|	-	0.37	11.2	13.0	2.7	8.4	3.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
DUF16	PF01519.16	gi|284162735|ref|YP_003401358.1|	-	0.38	11.3	7.9	1.7	9.2	0.1	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	DUF16
SlyX	PF04102.12	gi|284162735|ref|YP_003401358.1|	-	0.4	11.3	1.8	5.3	7.7	0.1	2.3	2	0	0	2	2	2	0	SlyX
DUF4201	PF13870.6	gi|284162735|ref|YP_003401358.1|	-	0.4	10.4	5.7	4.3	7.0	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
TACC_C	PF05010.14	gi|284162735|ref|YP_003401358.1|	-	0.46	10.3	11.1	3.2	7.5	3.7	2.2	2	0	0	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
FapA	PF03961.13	gi|284162735|ref|YP_003401358.1|	-	0.63	8.6	4.1	4	6.0	0.5	2.1	2	0	0	2	2	2	0	Flagellar	Assembly	Protein	A
GAS	PF13851.6	gi|284162735|ref|YP_003401358.1|	-	0.63	9.4	9.2	1	8.6	0.5	2.3	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
CENP-H	PF05837.12	gi|284162735|ref|YP_003401358.1|	-	0.65	10.4	4.2	2	8.9	0.1	2.2	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
Tropomyosin_1	PF12718.7	gi|284162735|ref|YP_003401358.1|	-	0.65	10.1	8.8	1.7	8.8	1.7	2.3	2	0	0	2	2	2	0	Tropomyosin	like
SKA2	PF16740.5	gi|284162735|ref|YP_003401358.1|	-	0.66	9.8	3.6	3.6	7.4	0.3	2.3	2	0	0	2	2	2	0	Spindle	and	kinetochore-associated	protein	2
Med4	PF10018.9	gi|284162735|ref|YP_003401358.1|	-	0.7	9.5	4.8	6.1	6.5	1.3	2.1	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
ADIP	PF11559.8	gi|284162735|ref|YP_003401358.1|	-	0.72	9.9	5.6	9.1	6.4	0.3	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
BLOC1_2	PF10046.9	gi|284162735|ref|YP_003401358.1|	-	0.84	10.0	6.7	1.9	8.9	1.1	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Prefoldin_2	PF01920.20	gi|284162735|ref|YP_003401358.1|	-	0.93	9.5	14.0	2	8.4	4.1	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
DUF641	PF04859.12	gi|284162735|ref|YP_003401358.1|	-	0.95	9.8	4.6	14	6.0	0.3	2.2	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DUF5082	PF16888.5	gi|284162735|ref|YP_003401358.1|	-	0.99	9.7	7.1	3.9	7.8	1.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
ERM	PF00769.19	gi|284162735|ref|YP_003401358.1|	-	1	9.1	8.0	3.1	7.5	1.1	2.1	2	0	0	2	2	2	0	Ezrin/radixin/moesin	family
HOOK	PF05622.12	gi|284162735|ref|YP_003401358.1|	-	1.2	7.1	7.2	1.1	7.3	1.2	2.1	2	0	0	2	2	2	0	HOOK	protein
CC2-LZ	PF16516.5	gi|284162735|ref|YP_003401358.1|	-	1.3	9.4	6.2	3.1	8.2	1.1	2.2	2	0	0	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
Fmp27_WPPW	PF10359.9	gi|284162735|ref|YP_003401358.1|	-	1.5	7.6	3.2	7.4	5.3	0.2	2.0	2	0	0	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
Laminin_II	PF06009.12	gi|284162735|ref|YP_003401358.1|	-	1.5	8.8	3.6	12	5.9	0.2	2.2	2	0	0	2	2	2	0	Laminin	Domain	II
Atg14	PF10186.9	gi|284162735|ref|YP_003401358.1|	-	1.7	7.7	3.8	5.4	6.0	0.4	2.1	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
JIP_LZII	PF16471.5	gi|284162735|ref|YP_003401358.1|	-	1.7	8.9	10.2	7.1	6.9	1.8	2.4	2	0	0	2	2	2	0	JNK-interacting	protein	leucine	zipper	II
Prefoldin	PF02996.17	gi|284162735|ref|YP_003401358.1|	-	1.7	8.6	6.0	6.8	6.6	1.0	2.4	2	0	0	2	2	2	0	Prefoldin	subunit
BRE1	PF08647.11	gi|284162735|ref|YP_003401358.1|	-	1.8	8.7	12.2	0.49	10.5	2.8	2.3	2	0	0	2	2	2	0	BRE1	E3	ubiquitin	ligase
TPR_MLP1_2	PF07926.12	gi|284162735|ref|YP_003401358.1|	-	2.2	8.3	7.7	4	7.5	0.9	2.2	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
YabA	PF06156.13	gi|284162735|ref|YP_003401358.1|	-	2.2	9.0	4.5	11	6.8	0.2	2.3	2	0	0	2	2	2	0	Initiation	control	protein	YabA
Apolipoprotein	PF01442.18	gi|284162735|ref|YP_003401358.1|	-	2.2	8.1	7.4	12	5.8	7.0	1.9	1	1	1	2	2	2	0	Apolipoprotein	A1/A4/E	domain
Fzo_mitofusin	PF04799.13	gi|284162735|ref|YP_003401358.1|	-	2.4	7.7	4.3	8.6	5.9	0.2	2.3	2	0	0	2	2	2	0	fzo-like	conserved	region
Spectrin	PF00435.21	gi|284162735|ref|YP_003401358.1|	-	2.8	8.5	6.5	1.3	9.5	0.8	2.2	2	0	0	2	2	2	0	Spectrin	repeat
AAA_23	PF13476.6	gi|284162735|ref|YP_003401358.1|	-	3.6	8.0	9.9	4.8	7.6	2.5	2.2	2	0	0	2	2	2	0	AAA	domain
CENP-F_leu_zip	PF10473.9	gi|284162735|ref|YP_003401358.1|	-	4.4	7.3	12.7	4.1	7.4	3.3	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
FlaC_arch	PF05377.11	gi|284162735|ref|YP_003401358.1|	-	5.2	7.5	8.8	4.6	7.7	2.1	2.6	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF5595	PF18077.1	gi|284162735|ref|YP_003401358.1|	-	6.6	6.9	11.3	8.2	6.6	3.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5595)
bZIP_1	PF00170.21	gi|284162735|ref|YP_003401358.1|	-	6.8	6.9	7.4	12	6.1	0.5	2.4	2	0	0	2	2	2	0	bZIP	transcription	factor
CLZ	PF16526.5	gi|284162735|ref|YP_003401358.1|	-	7.1	7.1	8.2	8.7	6.8	1.1	2.4	2	0	0	2	2	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
DUF4337	PF14235.6	gi|284162735|ref|YP_003401358.1|	-	7.9	6.6	8.3	7.5	6.7	0.2	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4337)
ATP-synt_C	PF00137.21	gi|284162736|ref|YP_003401359.1|	-	5.7e-12	45.8	17.1	7.6e-12	45.4	17.1	1.2	1	0	0	1	1	1	1	ATP	synthase	subunit	C
ATP-synt_C	PF00137.21	gi|284162738|ref|YP_003401361.1|	-	5.7e-12	45.8	17.1	7.6e-12	45.4	17.1	1.2	1	0	0	1	1	1	1	ATP	synthase	subunit	C
vATP-synt_E	PF01991.18	gi|284162739|ref|YP_003401362.1|	-	2.1e-38	131.7	22.3	2.7e-38	131.4	22.3	1.1	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
DUF3552	PF12072.8	gi|284162739|ref|YP_003401362.1|	-	3.9e-05	23.2	21.6	4.6e-05	22.9	21.6	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3552)
HrpE	PF06188.12	gi|284162739|ref|YP_003401362.1|	-	0.00045	20.2	4.2	0.00065	19.6	4.2	1.2	1	0	0	1	1	1	1	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
DUF885	PF05960.11	gi|284162739|ref|YP_003401362.1|	-	0.00074	19.3	5.8	0.001	18.8	5.8	1.2	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF885)
V-ATPase_G	PF03179.15	gi|284162739|ref|YP_003401362.1|	-	0.0018	18.8	21.8	0.0018	18.8	21.8	1.7	2	1	0	2	2	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|284162739|ref|YP_003401362.1|	-	0.003	17.6	22.5	0.0083	16.2	22.5	1.8	1	1	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
DivIVA	PF05103.13	gi|284162739|ref|YP_003401362.1|	-	0.0032	17.5	13.9	0.0032	17.5	13.9	2.2	1	1	1	2	2	2	1	DivIVA	protein
V-ATPase_G_2	PF16999.5	gi|284162739|ref|YP_003401362.1|	-	0.013	15.9	20.6	0.022	15.2	20.6	1.5	1	0	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
DUF2884	PF11101.8	gi|284162739|ref|YP_003401362.1|	-	0.026	14.0	7.7	0.047	13.2	7.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2884)
OmpH	PF03938.14	gi|284162739|ref|YP_003401362.1|	-	0.042	14.2	20.4	0.06	13.7	20.4	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
YtxH	PF12732.7	gi|284162739|ref|YP_003401362.1|	-	0.19	12.3	16.1	2.5e+02	2.3	15.8	3.5	1	1	0	1	1	1	0	YtxH-like	protein
Peptidase_C58	PF03543.14	gi|284162739|ref|YP_003401362.1|	-	0.24	11.1	2.9	0.22	11.2	1.8	1.5	1	1	0	1	1	1	0	Yersinia/Haemophilus	virulence	surface	antigen
DUF2968	PF11180.8	gi|284162739|ref|YP_003401362.1|	-	0.25	11.0	12.8	0.38	10.3	12.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
EURL	PF06937.11	gi|284162739|ref|YP_003401362.1|	-	0.28	10.5	6.5	0.42	10.0	6.5	1.3	1	0	0	1	1	1	0	EURL	protein
Exonuc_VII_L	PF02601.15	gi|284162739|ref|YP_003401362.1|	-	0.31	10.6	8.1	0.38	10.3	8.1	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
BT1	PF03092.16	gi|284162739|ref|YP_003401362.1|	-	0.47	8.6	3.6	0.63	8.2	3.6	1.1	1	0	0	1	1	1	0	BT1	family
V_ATPase_I	PF01496.19	gi|284162739|ref|YP_003401362.1|	-	0.56	8.0	7.2	0.53	8.1	7.2	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF883	PF05957.13	gi|284162739|ref|YP_003401362.1|	-	0.57	10.8	11.6	33	5.2	11.5	2.6	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
Mitofilin	PF09731.9	gi|284162739|ref|YP_003401362.1|	-	1.1	8.1	22.7	1.3	7.8	22.7	1.1	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
ICA69	PF04629.14	gi|284162739|ref|YP_003401362.1|	-	3.2	8.0	6.7	4	7.7	6.7	1.1	1	0	0	1	1	1	0	Islet	cell	autoantigen	ICA69,	C-terminal	domain
Activator-TraM	PF11657.8	gi|284162739|ref|YP_003401362.1|	-	3.5	7.5	12.2	11	5.9	12.2	1.8	1	1	0	1	1	1	0	Transcriptional	activator	TraM
Ribosomal_S13	PF00416.22	gi|284162739|ref|YP_003401362.1|	-	4	7.8	9.3	3.1	8.2	5.4	2.4	1	1	1	2	2	2	0	Ribosomal	protein	S13/S18
RNase_J_C	PF17770.1	gi|284162739|ref|YP_003401362.1|	-	4.8	8.3	16.2	0.57	11.3	3.5	3.2	2	1	2	4	4	3	0	Ribonuclease	J	C-terminal	domain
DUF5320	PF17253.2	gi|284162739|ref|YP_003401362.1|	-	7.5	7.7	8.1	37	5.5	8.1	2.2	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5320)
vATP-synt_AC39	PF01992.16	gi|284162740|ref|YP_003401363.1|	-	2.8e-70	237.5	0.8	3.1e-70	237.3	0.8	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
RPAP1_N	PF08621.10	gi|284162740|ref|YP_003401363.1|	-	0.15	11.9	0.1	23	4.9	0.0	3.1	2	0	0	2	2	2	0	RPAP1-like,	N-terminal
ATP-synt_F	PF01990.17	gi|284162741|ref|YP_003401364.1|	-	8.1e-18	64.5	0.6	1.1e-17	64.2	0.6	1.2	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DUF43	PF01861.16	gi|284162741|ref|YP_003401364.1|	-	0.028	13.6	0.6	0.032	13.5	0.6	1.1	1	0	0	1	1	1	0	Branched-chain	polyamine	synthase	A	C-terminal	domain
DEK_C	PF08766.11	gi|284162741|ref|YP_003401364.1|	-	0.17	11.8	1.9	0.53	10.3	0.2	2.2	2	0	0	2	2	2	0	DEK	C	terminal	domain
ATP-synt_ab	PF00006.25	gi|284162742|ref|YP_003401365.1|	-	2.8e-94	314.7	0.0	3.9e-94	314.3	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|284162742|ref|YP_003401365.1|	-	1.8e-46	156.9	0.1	4.2e-46	155.8	0.1	1.6	1	0	0	1	1	1	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|284162742|ref|YP_003401365.1|	-	9.1e-16	58.1	2.5	5.1e-15	55.8	2.5	2.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
RnfC_N	PF13375.6	gi|284162742|ref|YP_003401365.1|	-	0.00055	19.9	0.3	0.0054	16.7	0.0	2.3	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.22	gi|284162742|ref|YP_003401365.1|	-	0.0083	16.3	0.2	0.43	10.8	0.0	2.6	2	0	0	2	2	2	1	Peptidase	family	M23
AAA_22	PF13401.6	gi|284162742|ref|YP_003401365.1|	-	0.047	14.0	0.0	0.1	12.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|284162743|ref|YP_003401366.1|	-	3.6e-67	226.1	0.0	4.7e-67	225.8	0.0	1.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|284162743|ref|YP_003401366.1|	-	1.6e-13	51.0	0.5	2.9e-13	50.1	0.1	1.7	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|284162743|ref|YP_003401366.1|	-	1.4e-05	25.2	0.4	8.2e-05	22.7	0.1	2.3	2	0	0	2	2	2	1	HAS	barrel	domain
ATP-synt_D	PF01813.17	gi|284162744|ref|YP_003401367.1|	-	4.1e-58	196.5	15.4	4.7e-58	196.3	15.4	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF948	PF06103.11	gi|284162744|ref|YP_003401367.1|	-	0.0013	18.9	2.9	0.082	13.2	0.1	2.8	2	1	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF948)
TBCA	PF02970.16	gi|284162744|ref|YP_003401367.1|	-	0.043	14.1	0.9	0.043	14.1	0.9	2.9	2	1	0	2	2	2	0	Tubulin	binding	cofactor	A
PTPS	PF01242.19	gi|284162744|ref|YP_003401367.1|	-	0.061	13.3	0.7	0.67	9.9	0.1	2.1	2	0	0	2	2	2	0	6-pyruvoyl	tetrahydropterin	synthase
DUF2299	PF10061.9	gi|284162745|ref|YP_003401368.1|	-	1.9e-46	157.3	1.4	2.1e-46	157.1	1.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
EF1G	PF00647.19	gi|284162745|ref|YP_003401368.1|	-	0.1	12.7	0.1	0.18	11.8	0.1	1.4	1	0	0	1	1	1	0	Elongation	factor	1	gamma,	conserved	domain
tRNA_anti-codon	PF01336.25	gi|284162746|ref|YP_003401369.1|	-	0.024	14.6	2.0	0.056	13.4	0.7	2.2	2	0	0	2	2	2	0	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|284162746|ref|YP_003401369.1|	-	0.17	11.6	0.2	0.6	9.8	0.0	1.8	2	0	0	2	2	2	0	Cell	division	control	protein	24,	OB	domain	3
DUF1931	PF09123.11	gi|284162748|ref|YP_003401371.1|	-	4.6e-46	156.4	1.7	5.1e-46	156.2	1.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1931)
MvaI_BcnI	PF15515.6	gi|284162748|ref|YP_003401371.1|	-	0.0035	17.2	0.1	0.0043	16.9	0.1	1.1	1	0	0	1	1	1	1	MvaI/BcnI	restriction	endonuclease	family
UbiD	PF01977.16	gi|284162749|ref|YP_003401372.1|	-	3.6e-80	269.8	0.0	4.3e-80	269.6	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
DUF4250	PF14056.6	gi|284162749|ref|YP_003401372.1|	-	0.0057	16.6	0.0	0.013	15.4	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4250)
ArsD	PF06953.11	gi|284162749|ref|YP_003401372.1|	-	0.051	13.9	0.0	0.17	12.2	0.0	1.8	2	0	0	2	2	2	0	Arsenical	resistance	operon	trans-acting	repressor	ArsD
Prefoldin_2	PF01920.20	gi|284162750|ref|YP_003401373.1|	-	7.8e-28	96.5	20.0	9.4e-28	96.3	20.0	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
CENP-F_leu_zip	PF10473.9	gi|284162750|ref|YP_003401373.1|	-	0.00015	21.8	15.5	0.0042	17.1	2.0	2.1	2	0	0	2	2	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
UBN_AB	PF14075.6	gi|284162750|ref|YP_003401373.1|	-	0.00036	20.3	8.0	0.00047	20.0	8.0	1.1	1	0	0	1	1	1	1	Ubinuclein	conserved	middle	domain
TA0956	PF11513.8	gi|284162750|ref|YP_003401373.1|	-	0.0047	17.1	1.1	0.0065	16.7	1.1	1.4	1	1	0	1	1	1	1	Thermoplasma	acidophilum	protein	TA0956
Mod_r	PF07200.13	gi|284162750|ref|YP_003401373.1|	-	0.005	17.0	13.7	0.23	11.5	2.2	2.0	2	0	0	2	2	2	2	Modifier	of	rudimentary	(Mod(r))	protein
Nsp1_C	PF05064.13	gi|284162750|ref|YP_003401373.1|	-	0.0064	16.3	12.1	0.019	14.8	2.6	2.1	2	0	0	2	2	2	1	Nsp1-like	C-terminal	region
TPR_MLP1_2	PF07926.12	gi|284162750|ref|YP_003401373.1|	-	0.015	15.3	13.0	0.2	11.7	3.8	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
AAA_11	PF13086.6	gi|284162750|ref|YP_003401373.1|	-	0.019	14.8	6.1	0.024	14.4	6.1	1.0	1	0	0	1	1	1	0	AAA	domain
KIP1	PF07765.12	gi|284162750|ref|YP_003401373.1|	-	0.023	14.8	9.4	0.036	14.2	0.7	2.9	1	1	2	3	3	3	0	KIP1-like	protein
CinA_KH	PF18146.1	gi|284162750|ref|YP_003401373.1|	-	0.027	14.6	0.6	0.027	14.6	0.6	2.3	2	1	0	2	2	2	0	Damage-inducible	protein	CinA	KH	domain
DUF2408	PF10303.9	gi|284162750|ref|YP_003401373.1|	-	0.029	14.9	7.6	0.038	14.6	7.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
RNase_3_N	PF18497.1	gi|284162750|ref|YP_003401373.1|	-	0.029	14.6	5.1	0.54	10.5	5.1	2.2	1	1	0	1	1	1	0	Ribonuclease	III	N-terminal	domain
Imm51	PF15595.6	gi|284162750|ref|YP_003401373.1|	-	0.032	14.2	0.9	0.079	12.9	0.7	1.8	1	1	0	1	1	1	0	Immunity	protein	51
Cortex-I_coil	PF09304.10	gi|284162750|ref|YP_003401373.1|	-	0.033	14.4	13.9	0.58	10.4	4.5	2.1	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
GIT_CC	PF16559.5	gi|284162750|ref|YP_003401373.1|	-	0.034	14.0	3.1	0.034	14.0	3.1	2.5	2	1	0	2	2	2	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
DUF4763	PF15960.5	gi|284162750|ref|YP_003401373.1|	-	0.04	13.2	9.8	0.34	10.2	1.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4763)
V_ATPase_I	PF01496.19	gi|284162750|ref|YP_003401373.1|	-	0.04	11.8	7.7	0.048	11.6	7.7	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DHR10	PF18595.1	gi|284162750|ref|YP_003401373.1|	-	0.072	13.1	17.0	0.23	11.5	5.5	2.1	2	0	0	2	2	2	0	Designed	helical	repeat	protein	10	domain
ATG16	PF08614.11	gi|284162750|ref|YP_003401373.1|	-	0.073	13.3	12.2	1	9.5	3.8	2.0	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
LXG	PF04740.12	gi|284162750|ref|YP_003401373.1|	-	0.077	12.7	10.6	0.3	10.8	10.7	1.8	1	1	0	1	1	1	0	LXG	domain	of	WXG	superfamily
BLOC1_2	PF10046.9	gi|284162750|ref|YP_003401373.1|	-	0.11	12.9	11.6	0.52	10.6	2.5	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
HAUS-augmin3	PF14932.6	gi|284162750|ref|YP_003401373.1|	-	0.11	12.0	11.4	0.13	11.8	2.5	2.0	2	0	0	2	2	2	0	HAUS	augmin-like	complex	subunit	3
DEDD_Tnp_IS110	PF01548.17	gi|284162750|ref|YP_003401373.1|	-	0.11	12.3	3.4	0.4	10.6	0.6	2.2	2	0	0	2	2	2	0	Transposase
FUSC	PF04632.12	gi|284162750|ref|YP_003401373.1|	-	0.12	10.9	0.8	0.15	10.6	0.8	1.0	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
DUF4200	PF13863.6	gi|284162750|ref|YP_003401373.1|	-	0.12	12.7	16.6	0.11	12.9	7.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
WXG100	PF06013.12	gi|284162750|ref|YP_003401373.1|	-	0.13	12.5	8.4	6.7	7.0	0.2	3.2	2	1	1	3	3	3	0	Proteins	of	100	residues	with	WXG
FlaC_arch	PF05377.11	gi|284162750|ref|YP_003401373.1|	-	0.16	12.4	17.5	0.16	12.4	5.8	2.8	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
THOC7	PF05615.13	gi|284162750|ref|YP_003401373.1|	-	0.19	12.0	12.8	0.25	11.6	3.6	2.1	2	0	0	2	2	2	0	Tho	complex	subunit	7
Spc24	PF08286.11	gi|284162750|ref|YP_003401373.1|	-	0.25	11.6	16.4	2.1	8.6	5.1	2.2	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
DUF4618	PF15397.6	gi|284162750|ref|YP_003401373.1|	-	0.25	10.7	17.7	0.81	9.1	17.8	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
ZapB	PF06005.12	gi|284162750|ref|YP_003401373.1|	-	0.26	11.8	19.7	0.65	10.5	7.9	2.1	2	0	0	2	2	2	0	Cell	division	protein	ZapB
Baculo_PEP_C	PF04513.12	gi|284162750|ref|YP_003401373.1|	-	0.26	11.3	10.5	3.7	7.6	10.5	2.1	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MPS2	PF17060.5	gi|284162750|ref|YP_003401373.1|	-	0.3	10.3	7.4	0.35	10.1	7.4	1.1	1	0	0	1	1	1	0	Monopolar	spindle	protein	2
DUF1664	PF07889.12	gi|284162750|ref|YP_003401373.1|	-	0.31	11.1	14.8	0.28	11.2	4.4	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF2625	PF10946.8	gi|284162750|ref|YP_003401373.1|	-	0.32	10.0	2.9	0.14	11.2	0.5	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF2625
Prefoldin	PF02996.17	gi|284162750|ref|YP_003401373.1|	-	0.43	10.5	16.5	0.57	10.1	4.3	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
DUF5301	PF17225.3	gi|284162750|ref|YP_003401373.1|	-	0.48	10.9	6.6	0.54	10.7	4.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5300)
PRP1_N	PF06424.12	gi|284162750|ref|YP_003401373.1|	-	0.66	10.4	4.4	0.9	9.9	4.4	1.2	1	0	0	1	1	1	0	PRP1	splicing	factor,	N-terminal
Syntaxin-6_N	PF09177.11	gi|284162750|ref|YP_003401373.1|	-	0.66	10.6	10.6	1.1	9.8	1.6	2.2	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Atg14	PF10186.9	gi|284162750|ref|YP_003401373.1|	-	0.76	8.8	10.6	1.1	8.3	10.6	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Uso1_p115_C	PF04871.13	gi|284162750|ref|YP_003401373.1|	-	0.82	10.0	15.0	1.3e+02	2.9	15.0	2.1	1	1	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Exonuc_VII_L	PF02601.15	gi|284162750|ref|YP_003401373.1|	-	1	8.9	7.7	1.3	8.5	7.7	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Sec34	PF04136.15	gi|284162750|ref|YP_003401373.1|	-	1.1	9.1	12.6	2.2	8.2	2.3	2.1	1	1	0	2	2	2	0	Sec34-like	family
LPP	PF04728.13	gi|284162750|ref|YP_003401373.1|	-	1.1	9.7	7.5	1.4	9.3	0.1	2.8	2	1	0	2	2	2	0	Lipoprotein	leucine-zipper
Macoilin	PF09726.9	gi|284162750|ref|YP_003401373.1|	-	1.2	7.6	12.3	1.6	7.2	12.3	1.0	1	0	0	1	1	1	0	Macoilin	family
SlyX	PF04102.12	gi|284162750|ref|YP_003401373.1|	-	1.2	9.8	15.4	1	10.0	2.1	2.3	2	0	0	2	2	2	0	SlyX
DUF724	PF05266.14	gi|284162750|ref|YP_003401373.1|	-	1.3	8.8	14.8	2	8.2	14.8	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Acetyltransf_11	PF13720.6	gi|284162750|ref|YP_003401373.1|	-	1.4	9.5	6.1	8.6	6.9	1.6	2.4	1	1	1	2	2	2	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
DUF1492	PF07374.11	gi|284162750|ref|YP_003401373.1|	-	1.4	9.1	8.0	1.6	9.0	2.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1492)
DUF948	PF06103.11	gi|284162750|ref|YP_003401373.1|	-	1.5	9.2	11.0	3.7	7.9	0.8	2.7	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
GAS	PF13851.6	gi|284162750|ref|YP_003401373.1|	-	1.6	8.0	21.8	16	4.8	21.8	1.9	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
Nup54	PF13874.6	gi|284162750|ref|YP_003401373.1|	-	1.8	8.7	12.4	17	5.5	12.4	2.2	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
DASH_Dad2	PF08654.10	gi|284162750|ref|YP_003401373.1|	-	1.8	9.0	13.6	0.45	11.0	2.8	2.2	1	1	1	2	2	2	0	DASH	complex	subunit	Dad2
Com_YlbF	PF06133.11	gi|284162750|ref|YP_003401373.1|	-	1.9	9.1	18.2	2.1	9.0	6.0	2.1	1	1	1	2	2	2	0	Control	of	competence	regulator	ComK,	YlbF/YmcA
DUF5320	PF17253.2	gi|284162750|ref|YP_003401373.1|	-	1.9	9.6	10.4	5	8.3	1.6	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
Cauli_AT	PF03233.13	gi|284162750|ref|YP_003401373.1|	-	1.9	8.4	14.8	0.9	9.4	2.3	2.1	1	1	1	2	2	2	0	Aphid	transmission	protein
HDV_ag	PF01517.18	gi|284162750|ref|YP_003401373.1|	-	2.1	8.1	6.7	2.6	7.8	0.3	2.0	1	1	1	2	2	2	0	Hepatitis	delta	virus	delta	antigen
DegS	PF05384.11	gi|284162750|ref|YP_003401373.1|	-	2.3	7.7	17.3	36	3.8	17.3	2.0	1	1	0	1	1	1	0	Sensor	protein	DegS
YtxH	PF12732.7	gi|284162750|ref|YP_003401373.1|	-	2.5	8.7	5.9	1.1e+02	3.4	5.9	2.4	1	1	0	1	1	1	0	YtxH-like	protein
Spc7	PF08317.11	gi|284162750|ref|YP_003401373.1|	-	2.7	6.8	19.0	6.8	5.5	19.0	1.6	1	1	0	1	1	1	0	Spc7	kinetochore	protein
DUF4140	PF13600.6	gi|284162750|ref|YP_003401373.1|	-	3.1	8.3	11.4	0.95	9.9	1.4	2.4	2	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
YabA	PF06156.13	gi|284162750|ref|YP_003401373.1|	-	3.2	8.4	13.4	4.6	7.9	3.3	2.2	1	1	0	2	2	2	0	Initiation	control	protein	YabA
DASH_Spc19	PF08287.11	gi|284162750|ref|YP_003401373.1|	-	3.7	7.4	16.4	1.2	9.1	7.0	2.1	1	1	1	2	2	2	0	Spc19
DUF2968	PF11180.8	gi|284162750|ref|YP_003401373.1|	-	3.7	7.1	17.1	1.6	8.4	2.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DUF3086	PF11285.8	gi|284162750|ref|YP_003401373.1|	-	4.2	6.4	11.0	0.48	9.5	3.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3086)
BCAS2	PF05700.11	gi|284162750|ref|YP_003401373.1|	-	4.3	7.0	14.7	1	9.0	4.2	2.0	2	0	0	2	2	2	0	Breast	carcinoma	amplified	sequence	2	(BCAS2)
DUF2802	PF10975.8	gi|284162750|ref|YP_003401373.1|	-	5	7.3	14.3	1.7	8.9	0.1	3.2	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF2802)
HemX	PF04375.14	gi|284162750|ref|YP_003401373.1|	-	5	6.3	16.2	18	4.5	16.2	1.7	1	1	0	1	1	1	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
NuA4	PF09340.10	gi|284162750|ref|YP_003401373.1|	-	5.3	7.0	8.1	0.86	9.5	0.2	2.7	2	1	0	2	2	2	0	Histone	acetyltransferase	subunit	NuA4
APG6_N	PF17675.1	gi|284162750|ref|YP_003401373.1|	-	5.4	7.6	22.9	9.1	6.8	6.9	2.0	1	1	1	2	2	2	0	Apg6	coiled-coil	region
Fib_alpha	PF08702.10	gi|284162750|ref|YP_003401373.1|	-	6	7.1	13.8	13	6.0	13.8	1.5	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
XhlA	PF10779.9	gi|284162750|ref|YP_003401373.1|	-	6.2	7.1	14.0	0.51	10.6	5.7	2.2	2	1	0	2	2	2	0	Haemolysin	XhlA
Hemagglutinin	PF00509.18	gi|284162750|ref|YP_003401373.1|	-	6.4	5.1	6.7	1	7.7	1.9	1.8	1	1	1	2	2	2	0	Haemagglutinin
CpxA_peri	PF16527.5	gi|284162750|ref|YP_003401373.1|	-	6.5	7.2	7.4	1.8	8.9	1.2	2.0	1	1	1	2	2	2	0	Two-component	sensor	protein	CpxA,	periplasmic	domain
DUF4407	PF14362.6	gi|284162750|ref|YP_003401373.1|	-	6.5	6.0	9.6	12	5.1	9.6	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FmiP_Thoc5	PF09766.9	gi|284162750|ref|YP_003401373.1|	-	6.5	5.9	16.8	5.7	6.1	4.2	2.0	1	1	1	2	2	2	0	Fms-interacting	protein/Thoc5
DUF745	PF05335.13	gi|284162750|ref|YP_003401373.1|	-	7.3	6.3	12.9	37	4.0	12.9	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
IFT57	PF10498.9	gi|284162750|ref|YP_003401373.1|	-	8.3	5.3	16.9	2.7	6.9	10.5	1.9	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
KfrA_N	PF11740.8	gi|284162750|ref|YP_003401373.1|	-	9.3	7.0	14.9	12	6.7	2.1	2.1	1	1	1	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
Pcc1	PF09341.10	gi|284162751|ref|YP_003401374.1|	-	5.4e-11	42.5	0.1	5.5e-11	42.4	0.1	1.0	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DEAD_assoc	PF08494.11	gi|284162753|ref|YP_003401376.1|	-	2.4e-55	187.3	0.1	4.8e-55	186.3	0.1	1.5	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.29	gi|284162753|ref|YP_003401376.1|	-	8.9e-32	110.3	0.3	3.4e-30	105.1	0.0	3.0	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
LAGLIDADG_3	PF14528.6	gi|284162753|ref|YP_003401376.1|	-	6.4e-21	74.5	8.9	2.4e-15	56.6	1.1	4.2	4	0	0	4	4	4	2	LAGLIDADG-like	domain
Intein_splicing	PF14890.6	gi|284162753|ref|YP_003401376.1|	-	1.5e-17	63.8	0.2	2.6e-16	59.8	0.0	2.5	2	1	0	2	2	2	1	Intein	splicing	domain
Helicase_C	PF00271.31	gi|284162753|ref|YP_003401376.1|	-	2.7e-12	47.0	1.6	0.00023	21.5	0.1	3.6	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
HTH_3	PF01381.22	gi|284162753|ref|YP_003401376.1|	-	4e-09	36.4	0.9	7.3e-05	22.7	0.0	3.3	2	1	0	2	2	2	2	Helix-turn-helix
ResIII	PF04851.15	gi|284162753|ref|YP_003401376.1|	-	4e-06	26.9	0.0	2.4e-05	24.4	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HTH_26	PF13443.6	gi|284162753|ref|YP_003401376.1|	-	5.1e-06	26.8	0.1	0.00017	22.0	0.0	3.2	3	0	0	3	3	3	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.7	gi|284162753|ref|YP_003401376.1|	-	9e-05	22.4	1.7	0.44	10.6	0.0	3.6	2	0	0	2	2	2	2	Helix-turn-helix	domain
Cro	PF09048.10	gi|284162753|ref|YP_003401376.1|	-	0.034	14.2	0.1	0.095	12.7	0.1	1.8	1	0	0	1	1	1	0	Cro
PCI	PF01399.27	gi|284162753|ref|YP_003401376.1|	-	0.038	14.5	0.3	21	5.7	0.1	3.4	2	0	0	2	2	2	0	PCI	domain
BetR	PF08667.10	gi|284162753|ref|YP_003401376.1|	-	0.074	13.1	0.0	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	BetR	domain
DUF2754	PF10953.8	gi|284162753|ref|YP_003401376.1|	-	0.14	12.4	0.0	0.33	11.2	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2754)
DHquinase_I	PF01487.15	gi|284162754|ref|YP_003401377.1|	-	1.2e-37	130.4	0.0	1.8e-37	129.8	0.0	1.2	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Thioredoxin_3	PF13192.6	gi|284162755|ref|YP_003401378.1|	-	3.2e-12	46.3	1.9	1.3e-11	44.4	1.9	2.1	1	0	0	1	1	1	1	Thioredoxin	domain
HEAT_2	PF13646.6	gi|284162755|ref|YP_003401378.1|	-	1.1e-08	35.3	0.1	6.2e-08	32.9	0.1	2.2	2	1	0	2	2	2	1	HEAT	repeats
API5	PF05918.11	gi|284162755|ref|YP_003401378.1|	-	6.4e-05	22.0	1.2	0.00011	21.1	1.2	1.3	1	0	0	1	1	1	1	Apoptosis	inhibitory	protein	5	(API5)
KaiB	PF07689.12	gi|284162755|ref|YP_003401378.1|	-	0.00011	21.9	0.1	0.00031	20.4	0.0	1.9	2	0	0	2	2	2	1	KaiB	domain
Glutaredoxin	PF00462.24	gi|284162755|ref|YP_003401378.1|	-	0.00054	20.1	1.2	0.00054	20.1	1.2	2.8	3	0	0	3	3	3	1	Glutaredoxin
Cnd1	PF12717.7	gi|284162755|ref|YP_003401378.1|	-	0.00061	19.9	0.1	0.0011	19.0	0.1	1.5	1	0	0	1	1	1	1	non-SMC	mitotic	condensation	complex	subunit	1
Thioredoxin_4	PF13462.6	gi|284162755|ref|YP_003401378.1|	-	0.016	15.3	0.8	0.26	11.4	0.0	2.7	2	1	1	3	3	3	0	Thioredoxin
HOIP-UBA	PF16678.5	gi|284162755|ref|YP_003401378.1|	-	0.02	14.9	0.2	0.1	12.6	0.2	2.0	2	0	0	2	2	2	0	HOIP	UBA	domain	pair
Thioredoxin	PF00085.20	gi|284162755|ref|YP_003401378.1|	-	0.026	14.5	0.3	0.067	13.2	0.3	1.7	1	1	0	1	1	1	0	Thioredoxin
Adaptin_N	PF01602.20	gi|284162755|ref|YP_003401378.1|	-	0.041	12.5	0.0	0.054	12.0	0.0	1.1	1	0	0	1	1	1	0	Adaptin	N	terminal	region
DUF836	PF05768.14	gi|284162755|ref|YP_003401378.1|	-	0.086	13.3	0.1	0.25	11.8	0.1	1.8	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
ApoC-I	PF04691.12	gi|284162755|ref|YP_003401378.1|	-	0.21	11.5	2.6	1.4	8.9	0.2	2.7	2	0	0	2	2	2	0	Apolipoprotein	C-I	(ApoC-1)
Bactofilin	PF04519.13	gi|284162756|ref|YP_003401379.1|	-	1.4e-13	51.0	7.2	2e-08	34.4	0.8	2.5	2	1	0	2	2	2	2	Polymer-forming	cytoskeletal
Hexapep	PF00132.24	gi|284162756|ref|YP_003401379.1|	-	6.9e-06	25.6	13.8	0.0097	15.6	0.0	6.5	6	3	0	6	6	6	2	Bacterial	transferase	hexapeptide	(six	repeats)
PhosphMutase	PF10143.9	gi|284162757|ref|YP_003401380.1|	-	6.3e-59	198.7	0.0	9.3e-59	198.1	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|284162757|ref|YP_003401380.1|	-	6.7e-44	150.1	0.0	7.7e-44	149.9	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|284162757|ref|YP_003401380.1|	-	6.3e-05	22.7	0.1	0.0052	16.4	0.1	2.2	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.20	gi|284162757|ref|YP_003401380.1|	-	0.047	12.6	0.1	0.069	12.1	0.1	1.2	1	0	0	1	1	1	0	Alkaline	phosphatase
DUF1464	PF07318.12	gi|284162758|ref|YP_003401381.1|	-	7.9e-75	252.0	0.1	9.1e-75	251.8	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
RE_AccI	PF09545.10	gi|284162758|ref|YP_003401381.1|	-	0.071	12.1	0.1	0.17	10.8	0.0	1.6	1	1	1	2	2	2	0	AccI	restriction	endonuclease
Phage_integr_3	PF16795.5	gi|284162759|ref|YP_003401382.1|	-	1e-32	113.3	0.6	1e-32	113.3	0.6	2.0	2	1	0	2	2	2	1	Archaeal	phage	integrase
Phage_integrase	PF00589.22	gi|284162759|ref|YP_003401382.1|	-	0.082	12.7	0.0	1.7	8.4	0.0	2.5	3	0	0	3	3	3	0	Phage	integrase	family
DUF2663	PF10864.8	gi|284162761|ref|YP_003401384.1|	-	0.039	14.3	0.3	0.051	14.0	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2663)
Lar_restr_allev	PF14354.6	gi|284162762|ref|YP_003401385.1|	-	0.089	13.2	0.0	0.11	12.9	0.0	1.2	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Col_cuticle_N	PF01484.17	gi|284162764|ref|YP_003401387.1|	-	0.18	11.9	1.3	0.34	11.0	1.3	1.5	1	0	0	1	1	1	0	Nematode	cuticle	collagen	N-terminal	domain
FLgD_tudor	PF13861.6	gi|284162764|ref|YP_003401387.1|	-	0.43	10.8	2.0	1.2	9.5	2.1	1.7	1	1	0	1	1	1	0	FlgD	Tudor-like	domain
Bac_export_3	PF01313.19	gi|284162764|ref|YP_003401387.1|	-	3.1	7.8	10.5	0.14	12.1	4.9	1.7	2	0	0	2	2	2	0	Bacterial	export	proteins,	family	3
SLATT_1	PF18181.1	gi|284162765|ref|YP_003401388.1|	-	0.2	11.6	0.5	0.26	11.2	0.5	1.2	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
DUF4190	PF13828.6	gi|284162765|ref|YP_003401388.1|	-	1.5	8.6	10.6	0.08	12.7	3.5	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4190)
RseC_MucC	PF04246.12	gi|284162765|ref|YP_003401388.1|	-	3.8	7.5	6.5	13	5.8	2.1	2.1	2	0	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
Pox_D5	PF03288.16	gi|284162767|ref|YP_003401390.1|	-	0.012	16.1	0.0	0.022	15.2	0.0	1.4	1	0	0	1	1	1	0	Poxvirus	D5	protein-like
Cdc6_C	PF09079.11	gi|284162767|ref|YP_003401390.1|	-	0.065	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	CDC6,	C	terminal	winged	helix	domain
RFX_DNA_binding	PF02257.15	gi|284162767|ref|YP_003401390.1|	-	0.07	13.8	0.0	0.15	12.7	0.0	1.5	1	0	0	1	1	1	0	RFX	DNA-binding	domain
DUF826	PF05696.11	gi|284162768|ref|YP_003401391.1|	-	0.29	11.2	1.4	0.31	11.2	0.4	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF826)
YlqD	PF11068.8	gi|284162774|ref|YP_003401397.1|	-	0.0015	18.9	5.7	0.0031	17.9	5.7	1.5	1	0	0	1	1	1	1	YlqD	protein
PspA_IM30	PF04012.12	gi|284162774|ref|YP_003401397.1|	-	0.0032	17.1	5.3	0.0073	15.9	5.3	1.5	1	0	0	1	1	1	1	PspA/IM30	family
AAA_13	PF13166.6	gi|284162774|ref|YP_003401397.1|	-	0.0059	15.3	6.4	0.0087	14.8	6.4	1.2	1	0	0	1	1	1	1	AAA	domain
FAM76	PF16046.5	gi|284162774|ref|YP_003401397.1|	-	0.02	14.3	1.0	0.042	13.2	1.0	1.4	1	0	0	1	1	1	0	FAM76	protein
CREPT	PF16566.5	gi|284162774|ref|YP_003401397.1|	-	0.58	10.3	8.8	1.2	9.3	8.6	1.5	1	1	0	1	1	1	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
ARD	PF03079.14	gi|284162774|ref|YP_003401397.1|	-	7.8	6.7	7.5	30	4.7	0.2	2.3	2	0	0	2	2	2	0	ARD/ARD'	family
DUF2434	PF10361.9	gi|284162775|ref|YP_003401398.1|	-	0.024	13.6	0.3	0.028	13.4	0.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2434)
Gram_pos_anchor	PF00746.21	gi|284162775|ref|YP_003401398.1|	-	0.61	10.1	2.7	1.2	9.1	2.7	1.4	1	0	0	1	1	1	0	LPXTG	cell	wall	anchor	motif
Laminin_G_3	PF13385.6	gi|284162776|ref|YP_003401399.1|	-	1.8e-23	83.3	10.4	4.4e-23	82.1	3.0	3.1	3	0	0	3	3	3	1	Concanavalin	A-like	lectin/glucanases	superfamily
DUF4898	PF16239.5	gi|284162776|ref|YP_003401399.1|	-	0.00025	20.9	1.0	0.0013	18.6	0.2	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4898)
CarboxypepD_reg	PF13620.6	gi|284162776|ref|YP_003401399.1|	-	0.0041	17.4	3.6	0.025	14.9	0.0	3.2	3	1	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
PEGA	PF08308.11	gi|284162776|ref|YP_003401399.1|	-	0.0069	16.2	0.0	0.029	14.3	0.0	2.1	1	0	0	1	1	1	1	PEGA	domain
Sialidase	PF02973.16	gi|284162776|ref|YP_003401399.1|	-	0.059	12.9	0.3	0.059	12.9	0.3	2.1	2	1	0	2	2	2	0	Sialidase,	N-terminal	domain
TMEM131_like	PF12371.8	gi|284162776|ref|YP_003401399.1|	-	0.16	12.2	0.0	0.59	10.4	0.0	1.9	1	0	0	1	1	1	0	Transmembrane	protein	131-like
Sensor	PF13796.6	gi|284162778|ref|YP_003401401.1|	-	0.11	12.5	9.8	0.13	12.3	9.8	1.0	1	0	0	1	1	1	0	Putative	sensor
zf-AN1	PF01428.16	gi|284162780|ref|YP_003401403.1|	-	4e-11	42.9	5.9	7.9e-11	41.9	5.9	1.5	1	0	0	1	1	1	1	AN1-like	Zinc	finger
zf-CW	PF07496.15	gi|284162780|ref|YP_003401403.1|	-	0.062	13.3	3.6	0.13	12.3	3.6	1.5	1	0	0	1	1	1	0	CW-type	Zinc	Finger
Transp_Tc5_C	PF04236.15	gi|284162780|ref|YP_003401403.1|	-	0.25	11.7	7.5	0.44	10.9	6.0	2.2	2	1	0	2	2	2	0	Tc5	transposase	C-terminal	domain
DUF4215	PF13948.6	gi|284162780|ref|YP_003401403.1|	-	0.78	10.2	6.0	2	8.9	6.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4215)
DUF553	PF04473.12	gi|284162781|ref|YP_003401404.1|	-	3.3e-47	159.8	2.3	5.8e-47	159.1	2.3	1.4	1	0	0	1	1	1	1	Transglutaminase-like	domain
zf-AN1	PF01428.16	gi|284162781|ref|YP_003401404.1|	-	8.9e-11	41.8	6.4	1.6e-10	41.0	6.4	1.4	1	0	0	1	1	1	1	AN1-like	Zinc	finger
Peptidase_C93	PF06035.11	gi|284162781|ref|YP_003401404.1|	-	0.011	15.5	0.1	0.023	14.5	0.1	1.4	1	0	0	1	1	1	0	Bacterial	transglutaminase-like	cysteine	proteinase	BTLCP
Transglut_core	PF01841.19	gi|284162781|ref|YP_003401404.1|	-	0.011	16.1	0.0	0.066	13.7	0.0	2.2	1	1	0	1	1	1	0	Transglutaminase-like	superfamily
FYVE	PF01363.21	gi|284162781|ref|YP_003401404.1|	-	0.021	14.9	0.9	0.04	14.1	0.9	1.5	1	0	0	1	1	1	0	FYVE	zinc	finger
C5HCH	PF17982.1	gi|284162781|ref|YP_003401404.1|	-	0.35	11.0	2.4	0.89	9.8	2.4	1.6	1	0	0	1	1	1	0	NSD	Cys-His	rich	domain
zf-HIT	PF04438.16	gi|284162781|ref|YP_003401404.1|	-	2.2	8.2	8.0	4.2	7.3	8.0	1.5	1	0	0	1	1	1	0	HIT	zinc	finger
NUC202	PF08166.12	gi|284162783|ref|YP_003401406.1|	-	0.00031	20.8	0.0	0.00053	20.0	0.0	1.3	1	0	0	1	1	1	1	NUC202	domain
Proteasome	PF00227.26	gi|284162783|ref|YP_003401406.1|	-	0.062	12.8	0.2	0.21	11.0	0.1	1.9	2	1	0	2	2	2	0	Proteasome	subunit
MobL	PF18555.1	gi|284162783|ref|YP_003401406.1|	-	0.067	12.4	0.1	0.093	12.0	0.1	1.1	1	0	0	1	1	1	0	MobL	relaxases
PemK_toxin	PF02452.17	gi|284162784|ref|YP_003401407.1|	-	2.8e-18	66.3	0.4	3.1e-18	66.2	0.4	1.0	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
DUF104	PF01954.16	gi|284162785|ref|YP_003401408.1|	-	2.4e-14	53.5	2.8	2.6e-14	53.4	2.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF104
DUF234	PF03008.14	gi|284162786|ref|YP_003401409.1|	-	0.024	15.1	0.1	0.15	12.6	0.1	2.1	2	0	0	2	2	2	0	Archaea	bacterial	proteins	of	unknown	function
Gal4_dimer	PF03902.13	gi|284162786|ref|YP_003401409.1|	-	0.43	10.8	3.4	0.97	9.6	0.7	2.5	2	0	0	2	2	2	0	Gal4-like	dimerisation	domain
DUF3800	PF12686.7	gi|284162786|ref|YP_003401409.1|	-	5.8	7.6	8.0	17	6.1	8.0	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3800)
DUF3010	PF11215.8	gi|284162787|ref|YP_003401410.1|	-	2.3	8.6	4.9	2.8	8.3	0.1	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3010)
zf-AN1	PF01428.16	gi|284162788|ref|YP_003401411.1|	-	2.1e-11	43.8	7.5	2.1e-11	43.8	7.5	1.8	2	0	0	2	2	2	1	AN1-like	Zinc	finger
DUF3267	PF11667.8	gi|284162788|ref|YP_003401411.1|	-	5.6e-10	39.5	4.8	5.6e-10	39.5	4.8	2.6	2	1	1	3	3	3	1	Putative	zincin	peptidase
Desulfoferrod_N	PF06397.12	gi|284162788|ref|YP_003401411.1|	-	2.3	7.9	5.5	24	4.7	2.7	2.3	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
OppC_N	PF12911.7	gi|284162788|ref|YP_003401411.1|	-	2.4	8.2	7.4	2.6	8.1	1.8	3.0	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
HicA_toxin	PF07927.12	gi|284162790|ref|YP_003401413.1|	-	2e-07	31.0	0.4	5.5e-07	29.5	0.3	1.7	2	0	0	2	2	2	1	HicA	toxin	of	bacterial	toxin-antitoxin,
Dynactin_p22	PF07426.11	gi|284162791|ref|YP_003401414.1|	-	0.0065	16.3	0.4	0.022	14.6	0.4	1.9	2	0	0	2	2	2	1	Dynactin	subunit	p22
PHD_like	PF12910.7	gi|284162791|ref|YP_003401414.1|	-	0.053	13.5	0.3	0.13	12.2	0.1	1.9	2	0	0	2	2	2	0	Antitoxin	of	toxin-antitoxin,	RelE	/	RelB,	TA	system
HTH_34	PF13601.6	gi|284162792|ref|YP_003401415.1|	-	9.6e-11	41.7	0.1	3e-10	40.1	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|284162792|ref|YP_003401415.1|	-	2.5e-10	40.1	0.0	5e-10	39.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.20	gi|284162792|ref|YP_003401415.1|	-	2.7e-09	36.8	0.0	6.2e-09	35.6	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|284162792|ref|YP_003401415.1|	-	6.7e-09	35.2	1.5	1e-08	34.6	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.10	gi|284162792|ref|YP_003401415.1|	-	1.6e-08	34.2	0.0	3.2e-08	33.2	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HxlR	PF01638.17	gi|284162792|ref|YP_003401415.1|	-	2.6e-08	33.6	0.4	1.1e-07	31.5	0.1	2.0	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
TrmB	PF01978.19	gi|284162792|ref|YP_003401415.1|	-	3.1e-07	30.2	2.1	4.6e-07	29.6	0.5	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|284162792|ref|YP_003401415.1|	-	3.2e-07	30.2	0.1	7e-07	29.1	0.1	1.6	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|284162792|ref|YP_003401415.1|	-	6.2e-06	26.2	0.0	1.7e-05	24.8	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|284162792|ref|YP_003401415.1|	-	8.9e-06	25.6	0.2	1.9e-05	24.5	0.2	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.6	gi|284162792|ref|YP_003401415.1|	-	5.5e-05	23.6	0.1	0.00016	22.1	0.0	1.9	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|284162792|ref|YP_003401415.1|	-	6.3e-05	22.9	0.3	0.00045	20.1	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix
Rrf2	PF02082.20	gi|284162792|ref|YP_003401415.1|	-	0.00021	21.5	0.6	0.00049	20.4	0.1	1.9	2	0	0	2	2	1	1	Transcriptional	regulator
HTH_DeoR	PF08220.12	gi|284162792|ref|YP_003401415.1|	-	0.00043	20.0	0.0	0.00092	18.9	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Tnp_1_2	PF13022.6	gi|284162792|ref|YP_003401415.1|	-	0.00057	20.0	0.2	0.0014	18.8	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	of	insertion	element	transposase
RTP	PF02334.16	gi|284162792|ref|YP_003401415.1|	-	0.00079	20.0	1.0	0.034	14.8	0.0	2.5	2	1	0	2	2	2	1	Replication	terminator	protein
Fe_dep_repress	PF01325.19	gi|284162792|ref|YP_003401415.1|	-	0.0018	18.4	0.0	0.0049	17.0	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.6	gi|284162792|ref|YP_003401415.1|	-	0.002	18.1	0.1	0.0051	16.7	0.1	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.16	gi|284162792|ref|YP_003401415.1|	-	0.0021	17.8	0.2	0.0021	17.8	0.2	2.3	2	1	0	2	2	1	1	LexA	DNA	binding	domain
Penicillinase_R	PF03965.16	gi|284162792|ref|YP_003401415.1|	-	0.0081	16.5	1.2	0.032	14.6	0.1	2.4	2	1	0	2	2	2	1	Penicillinase	repressor
DUF4200	PF13863.6	gi|284162792|ref|YP_003401415.1|	-	0.012	15.9	3.1	0.012	15.9	3.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
HTH_Crp_2	PF13545.6	gi|284162792|ref|YP_003401415.1|	-	0.017	15.1	0.0	0.038	14.0	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Replic_Relax	PF13814.6	gi|284162792|ref|YP_003401415.1|	-	0.03	14.4	0.0	0.05	13.7	0.0	1.4	1	0	0	1	1	1	0	Replication-relaxation
GntR	PF00392.21	gi|284162792|ref|YP_003401415.1|	-	0.046	13.4	0.2	0.11	12.1	0.2	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
RQC	PF09382.10	gi|284162792|ref|YP_003401415.1|	-	0.049	13.4	0.0	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	RQC	domain
FeoC	PF09012.10	gi|284162792|ref|YP_003401415.1|	-	0.062	13.4	0.1	0.21	11.7	0.0	1.9	2	0	0	2	2	1	0	FeoC	like	transcriptional	regulator
TolA_bind_tri	PF16331.5	gi|284162792|ref|YP_003401415.1|	-	0.07	13.2	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	TolA	binding	protein	trimerisation
HTH_23	PF13384.6	gi|284162792|ref|YP_003401415.1|	-	0.082	12.7	0.1	0.37	10.6	0.0	2.1	2	0	0	2	2	2	0	Homeodomain-like	domain
RP-C	PF03428.13	gi|284162792|ref|YP_003401415.1|	-	0.085	12.5	0.1	0.2	11.3	0.0	1.6	2	0	0	2	2	1	0	Replication	protein	C	N-terminal	domain
AbiEi_4	PF13338.6	gi|284162792|ref|YP_003401415.1|	-	0.17	12.1	0.0	0.54	10.5	0.0	1.9	1	0	0	1	1	1	0	Transcriptional	regulator,	AbiEi	antitoxin
NusB	PF01029.18	gi|284162792|ref|YP_003401415.1|	-	0.58	10.4	3.3	1.2	9.4	0.7	2.2	2	0	0	2	2	2	0	NusB	family
ArsA_HSP20	PF17886.1	gi|284162793|ref|YP_003401416.1|	-	0.16	11.6	0.3	1.3	8.6	0.3	2.0	1	1	0	1	1	1	0	HSP20-like	domain	found	in	ArsA
DUF5388	PF17363.2	gi|284162794|ref|YP_003401417.1|	-	0.084	13.1	4.6	13	6.1	0.0	3.6	2	1	1	3	3	3	0	Family	of	unknown	function	(DUF5388)
HAUS6_N	PF14661.6	gi|284162794|ref|YP_003401417.1|	-	0.089	12.4	10.3	0.12	11.9	10.3	1.3	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Fmp27_WPPW	PF10359.9	gi|284162794|ref|YP_003401417.1|	-	0.13	11.1	7.8	0.14	11.0	7.8	1.1	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
Ead_Ea22	PF13935.6	gi|284162794|ref|YP_003401417.1|	-	0.13	12.9	8.6	0.23	12.1	8.6	1.4	1	0	0	1	1	1	0	Ead/Ea22-like	protein
RasGAP_C	PF03836.15	gi|284162794|ref|YP_003401417.1|	-	0.14	12.3	13.2	0.058	13.5	10.8	1.8	2	1	0	2	2	2	0	RasGAP	C-terminus
DUF4238	PF14022.6	gi|284162794|ref|YP_003401417.1|	-	0.24	10.9	6.4	0.26	10.7	6.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4238)
Erythro_esteras	PF05139.14	gi|284162794|ref|YP_003401417.1|	-	0.32	10.8	2.6	0.46	10.2	2.6	1.2	1	0	0	1	1	1	0	Erythromycin	esterase
DUF4449	PF14613.6	gi|284162794|ref|YP_003401417.1|	-	2.1	8.4	12.4	1.9	8.6	10.1	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4449)
Atg14	PF10186.9	gi|284162794|ref|YP_003401417.1|	-	3.3	6.7	14.9	4.1	6.4	14.9	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
ARTD15_N	PF18084.1	gi|284162794|ref|YP_003401417.1|	-	3.4	8.0	5.9	16	5.8	0.5	2.4	1	1	1	2	2	2	0	ARTD15	N-terminal	domain
Exonuc_VII_L	PF02601.15	gi|284162794|ref|YP_003401417.1|	-	3.5	7.1	8.0	4.2	6.8	8.0	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
V_ATPase_I	PF01496.19	gi|284162794|ref|YP_003401417.1|	-	4.7	5.0	8.6	5.5	4.8	8.6	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
FAM76	PF16046.5	gi|284162794|ref|YP_003401417.1|	-	6.9	5.9	11.3	8.7	5.6	11.3	1.1	1	0	0	1	1	1	0	FAM76	protein
TMPIT	PF07851.13	gi|284162794|ref|YP_003401417.1|	-	8.6	5.5	8.4	11	5.2	8.4	1.3	1	0	0	1	1	1	0	TMPIT-like	protein
MCM	PF00493.23	gi|284162795|ref|YP_003401418.1|	-	1.8e-87	292.2	0.0	2.7e-87	291.5	0.0	1.2	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_lid	PF17855.1	gi|284162795|ref|YP_003401418.1|	-	1.6e-24	86.1	2.6	1.6e-24	86.1	2.6	1.9	2	0	0	2	2	1	1	MCM	AAA-lid	domain
MCM_OB	PF17207.3	gi|284162795|ref|YP_003401418.1|	-	5e-19	68.4	0.7	8.8e-19	67.6	0.7	1.3	1	0	0	1	1	1	1	MCM	OB	domain
Mg_chelatase	PF01078.21	gi|284162795|ref|YP_003401418.1|	-	1.2e-12	47.7	0.1	7.9e-10	38.5	0.0	2.6	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|284162795|ref|YP_003401418.1|	-	2.9e-09	37.0	0.0	1e-08	35.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Zn-ribbon_8	PF09723.10	gi|284162795|ref|YP_003401418.1|	-	3.7e-05	23.7	1.2	8.4e-05	22.6	1.2	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
HypA	PF01155.19	gi|284162795|ref|YP_003401418.1|	-	0.00034	20.6	0.8	0.00081	19.4	0.8	1.6	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF2072	PF09845.9	gi|284162795|ref|YP_003401418.1|	-	0.0009	19.5	0.2	0.0009	19.5	0.2	1.9	2	0	0	2	2	2	1	Zn-ribbon	containing	protein
DZR	PF12773.7	gi|284162795|ref|YP_003401418.1|	-	0.0096	15.9	0.3	0.017	15.1	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
AAA	PF00004.29	gi|284162795|ref|YP_003401418.1|	-	0.025	15.0	0.2	0.1	13.0	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_RNApol_7kD	PF03604.13	gi|284162795|ref|YP_003401418.1|	-	0.037	13.7	1.2	0.089	12.5	1.2	1.7	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-RRN7	PF11781.8	gi|284162795|ref|YP_003401418.1|	-	0.05	13.3	0.4	3.7	7.3	0.0	2.4	1	1	1	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
TF_Zn_Ribbon	PF08271.12	gi|284162795|ref|YP_003401418.1|	-	0.061	12.9	1.1	11	5.7	0.1	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_9	PF14369.6	gi|284162795|ref|YP_003401418.1|	-	0.075	13.3	0.6	0.17	12.2	0.6	1.5	1	0	0	1	1	1	0	zinc-ribbon
DUF4131	PF13567.6	gi|284162795|ref|YP_003401418.1|	-	0.086	12.5	0.1	0.21	11.2	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
AAA_3	PF07726.11	gi|284162795|ref|YP_003401418.1|	-	0.087	12.7	0.0	0.19	11.6	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4776	PF16003.5	gi|284162795|ref|YP_003401418.1|	-	0.097	11.7	3.2	0.036	13.1	0.7	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4776)
Nudix_N_2	PF14803.6	gi|284162795|ref|YP_003401418.1|	-	0.14	12.1	2.7	0.34	10.8	2.7	1.7	1	1	0	1	1	1	0	Nudix	N-terminal
DUF3417	PF11897.8	gi|284162795|ref|YP_003401418.1|	-	0.15	12.5	0.0	0.98	9.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3417)
zf-ribbon_3	PF13248.6	gi|284162795|ref|YP_003401418.1|	-	0.52	9.8	3.5	3.4	7.2	0.5	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1451	PF07295.11	gi|284162795|ref|YP_003401418.1|	-	0.78	9.8	3.4	0.86	9.6	0.4	2.5	2	0	0	2	2	2	0	Zinc-ribbon	containing	domain
zinc_ribbon_2	PF13240.6	gi|284162795|ref|YP_003401418.1|	-	3.8	7.3	4.7	17	5.3	0.5	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Porin_1	PF00267.21	gi|284162797|ref|YP_003401420.1|	-	0.096	12.1	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	Gram-negative	porin
L_lactis_RepB_C	PF06430.12	gi|284162797|ref|YP_003401420.1|	-	0.1	12.6	0.1	0.13	12.2	0.1	1.3	1	0	0	1	1	1	0	Lactococcus	lactis	RepB	C-terminus
Holin_BhlA	PF10960.8	gi|284162799|ref|YP_003401422.1|	-	2.2e-05	24.3	0.5	4e-05	23.5	0.5	1.3	1	0	0	1	1	1	1	BhlA	holin	family
SieB	PF14163.6	gi|284162799|ref|YP_003401422.1|	-	0.0024	17.4	0.8	0.0035	16.8	0.4	1.3	1	1	1	2	2	2	1	Super-infection	exclusion	protein	B
DUF5305	PF17231.2	gi|284162799|ref|YP_003401422.1|	-	0.0027	17.1	0.1	0.0027	17.1	0.1	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5305)
LapA_dom	PF06305.11	gi|284162799|ref|YP_003401422.1|	-	0.0064	16.3	0.0	0.0087	15.8	0.0	1.2	1	0	0	1	1	1	1	Lipopolysaccharide	assembly	protein	A	domain
Peptidase_M56	PF05569.11	gi|284162799|ref|YP_003401422.1|	-	0.013	14.7	0.0	0.014	14.6	0.0	1.0	1	0	0	1	1	1	0	BlaR1	peptidase	M56
RasGAP_C	PF03836.15	gi|284162799|ref|YP_003401422.1|	-	0.016	15.3	0.2	0.021	15.0	0.2	1.1	1	0	0	1	1	1	0	RasGAP	C-terminus
SoDot-IcmSS	PF16848.5	gi|284162799|ref|YP_003401422.1|	-	0.023	14.7	0.2	0.031	14.3	0.2	1.2	1	0	0	1	1	1	0	Substrate	of	the	Dot/Icm	secretion	system,	putative
Syndecan	PF01034.20	gi|284162799|ref|YP_003401422.1|	-	0.047	13.6	0.3	0.094	12.7	0.3	1.5	1	0	0	1	1	1	0	Syndecan	domain
EPSP_synthase	PF00275.20	gi|284162799|ref|YP_003401422.1|	-	0.091	11.4	0.0	0.11	11.2	0.0	1.0	1	0	0	1	1	1	0	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DUF4381	PF14316.6	gi|284162799|ref|YP_003401422.1|	-	0.1	12.9	0.0	0.11	12.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4381)
HTH_25	PF13413.6	gi|284162800|ref|YP_003401423.1|	-	0.33	10.8	2.0	2.4	8.1	0.3	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain
zf-BED	PF02892.15	gi|284162801|ref|YP_003401424.1|	-	0.0025	17.8	0.0	0.0031	17.5	0.0	1.2	1	0	0	1	1	1	1	BED	zinc	finger
zf-C2H2_12	PF18658.1	gi|284162801|ref|YP_003401424.1|	-	0.0028	17.2	0.0	0.0034	16.9	0.0	1.1	1	0	0	1	1	1	1	Zinc-finger	C2H2-type
GramPos_pilinD1	PF16555.5	gi|284162801|ref|YP_003401424.1|	-	0.055	13.6	0.0	0.058	13.5	0.0	1.0	1	0	0	1	1	1	0	Gram-positive	pilin	subunit	D1,	N-terminal	domain
PTH2	PF01981.16	gi|284162804|ref|YP_003401427.1|	-	1.3e-38	131.9	0.3	1.5e-38	131.7	0.3	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
BTHB	PF18410.1	gi|284162804|ref|YP_003401427.1|	-	0.043	13.6	0.2	0.065	13.0	0.2	1.2	1	0	0	1	1	1	0	Basic	tilted	helix	bundle	domain
HGTP_anticodon	PF03129.20	gi|284162804|ref|YP_003401427.1|	-	0.064	13.4	1.0	27	5.0	0.1	3.0	2	1	1	3	3	3	0	Anticodon	binding	domain
DUF2000	PF09391.10	gi|284162804|ref|YP_003401427.1|	-	0.074	13.0	0.5	8.3	6.3	0.0	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2000)
DUF763	PF05559.11	gi|284162806|ref|YP_003401429.1|	-	4.2e-115	384.2	0.0	1.1e-114	382.8	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH_5	PF14520.6	gi|284162806|ref|YP_003401429.1|	-	0.034	14.7	0.2	2.4	8.9	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
HHH	PF00633.23	gi|284162806|ref|YP_003401429.1|	-	0.064	13.1	0.1	0.35	10.8	0.0	2.2	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
HrcA_DNA-bdg	PF03444.15	gi|284162807|ref|YP_003401430.1|	-	4.2e-36	122.4	0.1	7e-36	121.7	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.28	gi|284162807|ref|YP_003401430.1|	-	9.1e-19	67.7	2.9	3.2e-12	46.7	0.5	3.0	3	0	0	3	3	3	2	CBS	domain
HTH_11	PF08279.12	gi|284162807|ref|YP_003401430.1|	-	2.4e-07	30.6	0.0	5.2e-07	29.5	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
Rrf2	PF02082.20	gi|284162807|ref|YP_003401430.1|	-	2.4e-07	31.0	0.0	5.8e-07	29.8	0.0	1.6	1	1	0	1	1	1	1	Transcriptional	regulator
LexA_DNA_bind	PF01726.16	gi|284162807|ref|YP_003401430.1|	-	0.0017	18.1	0.1	0.0031	17.2	0.1	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
TrmB	PF01978.19	gi|284162807|ref|YP_003401430.1|	-	0.0038	17.1	0.0	0.0079	16.1	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|284162807|ref|YP_003401430.1|	-	0.041	13.7	0.0	0.12	12.2	0.0	1.8	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
IF3_N	PF05198.16	gi|284162807|ref|YP_003401430.1|	-	0.057	13.7	0.1	0.66	10.3	0.1	2.8	2	1	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Phage_rep_org_N	PF09681.10	gi|284162807|ref|YP_003401430.1|	-	0.076	12.9	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_Crp_2	PF13545.6	gi|284162807|ref|YP_003401430.1|	-	0.08	12.9	0.0	0.19	11.7	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|284162807|ref|YP_003401430.1|	-	0.12	12.1	0.0	0.27	10.9	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_24	PF13412.6	gi|284162807|ref|YP_003401430.1|	-	0.14	11.8	2.1	0.15	11.6	0.2	2.1	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|284162807|ref|YP_003401430.1|	-	0.18	11.9	0.0	0.48	10.5	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
Usp	PF00582.26	gi|284162808|ref|YP_003401431.1|	-	6.6e-31	107.7	3.7	7.1e-24	84.9	0.5	2.1	2	0	0	2	2	2	2	Universal	stress	protein	family
UDG	PF03167.19	gi|284162809|ref|YP_003401432.1|	-	2.5e-44	151.0	0.0	3.2e-44	150.7	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Receptor_IA-2	PF11548.8	gi|284162810|ref|YP_003401433.1|	-	0.038	14.0	0.7	0.092	12.7	0.2	1.9	1	1	1	2	2	2	0	Protein-tyrosine	phosphatase	receptor	IA-2
CelTOS	PF18659.1	gi|284162810|ref|YP_003401433.1|	-	0.7	10.4	4.3	0.76	10.2	1.5	2.3	1	1	0	2	2	2	0	Cell-traversal	protein	for	ookinetes	and	sporozoites
AHD	PF17793.1	gi|284162810|ref|YP_003401433.1|	-	7.4	6.4	6.5	24	4.8	3.3	3.0	2	1	0	2	2	2	0	ANC1	homology	domain	(AHD)
ROK	PF00480.20	gi|284162811|ref|YP_003401434.1|	-	1.7e-34	119.6	0.4	5.1e-34	118.1	0.4	1.7	1	1	0	1	1	1	1	ROK	family
Hydant_A_N	PF05378.13	gi|284162811|ref|YP_003401434.1|	-	0.00089	19.0	0.2	0.0015	18.3	0.2	1.3	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
Tex_YqgF	PF16921.5	gi|284162811|ref|YP_003401434.1|	-	0.059	13.8	0.0	0.092	13.2	0.0	1.3	1	0	0	1	1	1	0	Tex	protein	YqgF-like	domain
FtsA	PF14450.6	gi|284162811|ref|YP_003401434.1|	-	0.074	13.5	0.1	0.15	12.5	0.1	1.5	1	0	0	1	1	1	0	Cell	division	protein	FtsA
Pan_kinase	PF03309.14	gi|284162811|ref|YP_003401434.1|	-	0.15	11.8	0.1	3.3	7.5	0.1	2.1	1	1	0	1	1	1	0	Type	III	pantothenate	kinase
Glyco_trans_2_3	PF13632.6	gi|284162812|ref|YP_003401435.1|	-	2.9e-19	69.8	10.0	3.2e-18	66.4	10.0	2.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_3	PF13641.6	gi|284162812|ref|YP_003401435.1|	-	3.7e-15	56.4	0.0	2.1e-14	54.0	0.0	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.26	gi|284162812|ref|YP_003401435.1|	-	8.8e-13	48.4	0.2	1.7e-12	47.5	0.1	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|284162812|ref|YP_003401435.1|	-	8.3e-09	35.1	0.1	1.1e-07	31.5	0.1	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.9	gi|284162812|ref|YP_003401435.1|	-	0.00041	19.9	0.1	0.63	9.5	0.0	2.1	1	1	1	2	2	2	2	Glycosyltransferase	like	family	2
PrpR_N	PF06506.11	gi|284162812|ref|YP_003401435.1|	-	0.057	13.0	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Propionate	catabolism	activator
Glyco_tranf_2_5	PF13712.6	gi|284162812|ref|YP_003401435.1|	-	0.13	11.9	0.0	0.46	10.1	0.0	1.8	2	0	0	2	2	2	0	Glycosyltransferase	like	family
TrmB	PF01978.19	gi|284162813|ref|YP_003401436.1|	-	1.7e-11	43.8	1.0	1.8e-11	43.7	0.2	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|284162813|ref|YP_003401436.1|	-	1.6e-08	34.0	0.1	1.6e-08	34.0	0.1	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|284162813|ref|YP_003401436.1|	-	7.3e-07	29.0	0.1	1.4e-06	28.1	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_AsnC-type	PF13404.6	gi|284162813|ref|YP_003401436.1|	-	1.5e-06	27.9	0.0	2.5e-06	27.2	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.11	gi|284162813|ref|YP_003401436.1|	-	4.4e-06	26.6	0.0	1.2e-05	25.2	0.0	1.7	2	0	0	2	2	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
FaeA	PF04703.12	gi|284162813|ref|YP_003401436.1|	-	4.4e-06	27.0	0.0	6e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	FaeA-like	protein
MarR_2	PF12802.7	gi|284162813|ref|YP_003401436.1|	-	7.9e-06	25.7	0.2	1.7e-05	24.6	0.2	1.6	1	1	0	1	1	1	1	MarR	family
HxlR	PF01638.17	gi|284162813|ref|YP_003401436.1|	-	2.1e-05	24.3	0.3	3e-05	23.8	0.3	1.4	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_11	PF08279.12	gi|284162813|ref|YP_003401436.1|	-	2.1e-05	24.4	0.2	2.1e-05	24.4	0.2	1.8	2	0	0	2	2	1	1	HTH	domain
LexA_DNA_bind	PF01726.16	gi|284162813|ref|YP_003401436.1|	-	2.7e-05	23.9	0.4	0.00013	21.6	0.2	2.2	2	0	0	2	2	2	1	LexA	DNA	binding	domain
TFIIE_alpha	PF02002.17	gi|284162813|ref|YP_003401436.1|	-	5.1e-05	23.1	3.6	7.1e-05	22.6	3.6	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
GntR	PF00392.21	gi|284162813|ref|YP_003401436.1|	-	0.00022	20.8	1.3	0.00053	19.6	0.1	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
Rrf2	PF02082.20	gi|284162813|ref|YP_003401436.1|	-	0.00029	21.1	0.0	0.0005	20.4	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.22	gi|284162813|ref|YP_003401436.1|	-	0.00032	20.5	0.2	0.00074	19.4	0.1	1.7	1	1	0	1	1	1	1	MarR	family
HTH_29	PF13551.6	gi|284162813|ref|YP_003401436.1|	-	0.00038	20.4	0.0	0.00058	19.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_DeoR	PF08220.12	gi|284162813|ref|YP_003401436.1|	-	0.00039	20.1	0.1	0.00083	19.1	0.1	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_20	PF12840.7	gi|284162813|ref|YP_003401436.1|	-	0.00041	20.3	0.2	0.00076	19.5	0.0	1.5	2	0	0	2	2	1	1	Helix-turn-helix	domain
IF2_N	PF04760.15	gi|284162813|ref|YP_003401436.1|	-	0.00042	20.1	1.3	0.00065	19.5	0.1	1.9	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
Fe_dep_repress	PF01325.19	gi|284162813|ref|YP_003401436.1|	-	0.00086	19.5	0.1	0.0019	18.4	0.1	1.6	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.6	gi|284162813|ref|YP_003401436.1|	-	0.002	17.8	0.0	0.0039	17.0	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_IclR	PF09339.10	gi|284162813|ref|YP_003401436.1|	-	0.0022	17.8	0.0	0.0033	17.2	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_28	PF13518.6	gi|284162813|ref|YP_003401436.1|	-	0.0059	16.7	0.0	0.013	15.7	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_9	PF08221.11	gi|284162813|ref|YP_003401436.1|	-	0.0089	16.1	0.0	0.015	15.4	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_8	PF02954.19	gi|284162813|ref|YP_003401436.1|	-	0.016	15.0	0.1	0.04	13.7	0.1	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_7	PF02796.15	gi|284162813|ref|YP_003401436.1|	-	0.022	14.9	0.2	0.11	12.6	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
DUF2089	PF09862.9	gi|284162813|ref|YP_003401436.1|	-	0.029	14.4	0.3	0.046	13.7	0.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
HTH_Crp_2	PF13545.6	gi|284162813|ref|YP_003401436.1|	-	0.04	13.9	0.0	0.091	12.8	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.6	gi|284162813|ref|YP_003401436.1|	-	0.06	13.1	0.0	0.18	11.6	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
KorB	PF08535.10	gi|284162813|ref|YP_003401436.1|	-	0.078	13.0	0.0	0.19	11.8	0.0	1.8	1	1	0	1	1	1	0	KorB	domain
GerE	PF00196.19	gi|284162813|ref|YP_003401436.1|	-	0.091	12.3	0.2	0.66	9.6	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
ANT	PF03374.14	gi|284162813|ref|YP_003401436.1|	-	0.094	13.0	0.0	0.13	12.6	0.0	1.2	1	0	0	1	1	1	0	Phage	antirepressor	protein	KilAC	domain
HTH_10	PF04967.12	gi|284162813|ref|YP_003401436.1|	-	0.14	12.0	0.6	0.35	10.7	0.0	1.9	2	0	0	2	2	2	0	HTH	DNA	binding	domain
FeoC	PF09012.10	gi|284162813|ref|YP_003401436.1|	-	0.15	12.1	0.1	0.23	11.5	0.1	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Dimerisation2	PF16864.5	gi|284162813|ref|YP_003401436.1|	-	0.16	12.0	0.0	0.2	11.7	0.0	1.2	1	0	0	1	1	1	0	Dimerisation	domain
RPA_C	PF08784.11	gi|284162813|ref|YP_003401436.1|	-	0.22	12.2	0.0	0.42	11.3	0.0	1.5	1	1	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_36	PF13730.6	gi|284162813|ref|YP_003401436.1|	-	0.27	11.2	0.0	0.27	11.2	0.0	2.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
Glycos_transf_1	PF00534.20	gi|284162814|ref|YP_003401437.1|	-	6.6e-29	100.6	0.0	1.9e-28	99.1	0.0	1.9	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|284162814|ref|YP_003401437.1|	-	7.3e-23	81.5	0.0	1.3e-22	80.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|284162814|ref|YP_003401437.1|	-	1.1e-18	67.8	1.1	1.8e-17	63.9	0.8	2.2	1	1	1	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|284162814|ref|YP_003401437.1|	-	6.8e-10	39.2	0.0	1.3e-09	38.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|284162814|ref|YP_003401437.1|	-	7.1e-06	26.6	0.0	1.8e-05	25.2	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
PIGA	PF08288.12	gi|284162814|ref|YP_003401437.1|	-	0.005	17.4	0.2	0.011	16.3	0.2	1.7	1	0	0	1	1	1	1	PIGA	(GPI	anchor	biosynthesis)
Glyco_transf_5	PF08323.11	gi|284162814|ref|YP_003401437.1|	-	0.043	13.5	0.3	0.34	10.6	0.1	2.4	2	1	0	2	2	2	0	Starch	synthase	catalytic	domain
UbiA	PF01040.18	gi|284162815|ref|YP_003401438.1|	-	2.4e-24	86.0	9.8	3e-24	85.7	9.8	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
ATP1G1_PLM_MAT8	PF02038.16	gi|284162815|ref|YP_003401438.1|	-	0.47	9.9	2.7	13	5.3	0.1	2.5	2	0	0	2	2	2	0	ATP1G1/PLM/MAT8	family
Flagellar_rod	PF05149.12	gi|284162816|ref|YP_003401439.1|	-	0.00061	19.4	0.1	0.00065	19.3	0.1	1.0	1	0	0	1	1	1	1	Paraflagellar	rod	protein
HEAT_2	PF13646.6	gi|284162817|ref|YP_003401440.1|	-	3.1e-33	114.0	7.3	5.6e-24	84.4	3.3	2.1	1	1	1	2	2	2	2	HEAT	repeats
HEAT	PF02985.22	gi|284162817|ref|YP_003401440.1|	-	1.8e-18	65.0	0.1	9.5e-07	28.6	0.0	3.3	3	0	0	3	3	3	3	HEAT	repeat
HEAT_PBS	PF03130.16	gi|284162817|ref|YP_003401440.1|	-	4.3e-18	64.1	7.4	1.3e-07	31.6	0.1	3.8	4	0	0	4	4	4	2	PBS	lyase	HEAT-like	repeat
HEAT_EZ	PF13513.6	gi|284162817|ref|YP_003401440.1|	-	5.6e-12	45.9	1.1	2.3e-06	28.0	0.0	3.3	3	0	0	3	3	3	2	HEAT-like	repeat
Arm	PF00514.23	gi|284162817|ref|YP_003401440.1|	-	1.6e-10	40.6	0.0	0.003	17.5	0.0	3.3	2	1	1	3	3	3	2	Armadillo/beta-catenin-like	repeat
Cnd1	PF12717.7	gi|284162817|ref|YP_003401440.1|	-	2.7e-06	27.5	0.5	6.1e-05	23.1	0.5	2.8	1	1	1	2	2	2	1	non-SMC	mitotic	condensation	complex	subunit	1
RasGEF_N_2	PF14663.6	gi|284162817|ref|YP_003401440.1|	-	4.4e-05	23.8	0.1	3.8	7.9	0.0	3.1	1	1	2	3	3	3	2	Rapamycin-insensitive	companion	of	mTOR	RasGEF_N	domain
Adaptin_N	PF01602.20	gi|284162817|ref|YP_003401440.1|	-	4.5e-05	22.2	0.1	5.6e-05	21.9	0.1	1.1	1	0	0	1	1	1	1	Adaptin	N	terminal	region
ERAP1_C	PF11838.8	gi|284162817|ref|YP_003401440.1|	-	8e-05	22.3	0.1	9.1e-05	22.1	0.1	1.0	1	0	0	1	1	1	1	ERAP1-like	C-terminal	domain
Aconitase_B_N	PF11791.8	gi|284162817|ref|YP_003401440.1|	-	0.00025	21.2	0.9	0.064	13.3	0.1	2.6	1	1	1	2	2	2	2	Aconitate	B	N-terminal	domain
Cohesin_HEAT	PF12765.7	gi|284162817|ref|YP_003401440.1|	-	0.00057	20.1	1.0	0.006	16.9	0.2	2.4	1	1	1	2	2	2	1	HEAT	repeat	associated	with	sister	chromatid	cohesion
DUF2019	PF09450.10	gi|284162817|ref|YP_003401440.1|	-	0.012	15.6	0.7	0.63	10.0	0.2	2.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF2019)
TAN	PF11640.8	gi|284162817|ref|YP_003401440.1|	-	0.015	15.4	0.2	0.02	15.0	0.2	1.2	1	0	0	1	1	1	0	Telomere-length	maintenance	and	DNA	damage	repair
DUF3385	PF11865.8	gi|284162817|ref|YP_003401440.1|	-	0.015	15.2	0.0	0.65	9.9	0.0	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3385)
DUF5578	PF17741.1	gi|284162817|ref|YP_003401440.1|	-	0.018	14.5	0.0	3.9	6.8	0.0	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5578)
Vac14_Fab1_bd	PF12755.7	gi|284162817|ref|YP_003401440.1|	-	0.018	15.6	0.1	14	6.3	0.0	3.1	1	1	0	2	2	2	0	Vacuolar	14	Fab1-binding	region
ALF	PF03752.13	gi|284162817|ref|YP_003401440.1|	-	0.024	14.6	1.3	0.45	10.5	0.0	2.5	2	0	0	2	2	2	0	Short	repeats	of	unknown	function
DUF848	PF05852.11	gi|284162817|ref|YP_003401440.1|	-	0.033	14.3	0.3	0.04	14.0	0.3	1.3	1	0	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
RuvA_C	PF07499.13	gi|284162817|ref|YP_003401440.1|	-	1.5	9.4	6.8	2.3	8.8	0.2	3.2	3	1	0	3	3	3	0	RuvA,	C-terminal	domain
Radical_SAM	PF04055.21	gi|284162819|ref|YP_003401442.1|	-	1.5e-16	61.2	0.9	1e-14	55.3	0.7	2.2	2	0	0	2	2	2	2	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|284162819|ref|YP_003401442.1|	-	6.5e-07	29.4	0.0	1.3e-06	28.4	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
GATase_3	PF07685.14	gi|284162820|ref|YP_003401443.1|	-	1.1e-41	142.6	0.0	1.8e-41	141.9	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|284162820|ref|YP_003401443.1|	-	1.2e-21	77.0	0.0	2.5e-21	76.1	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|284162820|ref|YP_003401443.1|	-	7.2e-19	68.4	0.7	6.2e-13	49.0	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
SNO	PF01174.19	gi|284162820|ref|YP_003401443.1|	-	0.00045	20.1	0.0	0.00093	19.1	0.0	1.5	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
DJ-1_PfpI	PF01965.24	gi|284162820|ref|YP_003401443.1|	-	0.0025	17.7	0.0	0.0043	16.9	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF1611	PF07755.11	gi|284162820|ref|YP_003401443.1|	-	0.015	14.6	1.7	0.064	12.5	0.3	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
DUF2344	PF10105.9	gi|284162820|ref|YP_003401443.1|	-	0.042	13.7	0.0	0.24	11.2	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2344)
AAA_18	PF13238.6	gi|284162820|ref|YP_003401443.1|	-	0.12	13.0	0.0	0.41	11.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DsrC	PF04358.13	gi|284162821|ref|YP_003401444.1|	-	1.4e-41	141.3	0.0	1.5e-41	141.2	0.0	1.0	1	0	0	1	1	1	1	DsrC	like	protein
Fer4_11	PF13247.6	gi|284162822|ref|YP_003401445.1|	-	5.2e-17	61.8	15.2	8.8e-12	45.0	5.0	3.2	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162822|ref|YP_003401445.1|	-	3.9e-12	46.6	22.9	2.9e-09	37.4	5.5	3.5	2	2	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162822|ref|YP_003401445.1|	-	1.2e-07	31.2	10.0	2.4e-07	30.3	2.1	5.5	7	0	0	7	7	6	3	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|284162822|ref|YP_003401445.1|	-	5e-07	29.7	6.2	5e-07	29.7	6.2	3.8	2	2	3	5	5	5	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|284162822|ref|YP_003401445.1|	-	5.7e-07	29.3	32.0	3e-06	27.1	3.5	5.1	4	1	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284162822|ref|YP_003401445.1|	-	1.4e-06	28.4	24.1	0.0038	17.4	7.8	3.8	1	1	4	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|284162822|ref|YP_003401445.1|	-	0.0011	18.9	2.0	0.0011	18.9	2.0	4.8	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|284162822|ref|YP_003401445.1|	-	0.0017	19.2	34.3	0.041	14.8	4.0	4.5	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|284162822|ref|YP_003401445.1|	-	0.0017	18.7	2.0	0.0017	18.7	2.0	4.5	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|284162822|ref|YP_003401445.1|	-	0.083	13.8	24.5	0.97	10.4	5.1	4.7	4	1	1	5	5	5	0	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.6	gi|284162822|ref|YP_003401445.1|	-	0.13	12.9	0.3	0.13	12.9	0.3	3.4	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|284162822|ref|YP_003401445.1|	-	0.95	10.0	25.4	0.1	13.2	5.0	4.7	4	2	1	5	5	5	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|284162822|ref|YP_003401445.1|	-	3.1	8.0	23.5	0.093	12.9	10.8	3.7	4	1	0	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|284162822|ref|YP_003401445.1|	-	4.4	7.8	26.7	0.28	11.6	8.1	3.9	2	2	1	3	3	3	0	4Fe-4S	dicluster	domain
NrfD	PF03916.14	gi|284162823|ref|YP_003401446.1|	-	1.4e-48	166.2	25.8	3.7e-48	164.8	25.8	1.7	1	1	0	1	1	1	1	Polysulphide	reductase,	NrfD
Abhydrolase_9_N	PF15420.6	gi|284162823|ref|YP_003401446.1|	-	0.9	9.5	6.1	0.57	10.1	0.1	3.0	1	1	1	3	3	3	0	Alpha/beta-hydrolase	family	N-terminus
Nitrate_red_gam	PF02665.14	gi|284162824|ref|YP_003401447.1|	-	1.5e-18	67.1	20.3	6e-16	58.7	12.4	2.1	2	0	0	2	2	2	2	Nitrate	reductase	gamma	subunit
Fer4_8	PF13183.6	gi|284162825|ref|YP_003401448.1|	-	3.4e-09	37.0	1.1	7.3e-09	35.9	1.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162825|ref|YP_003401448.1|	-	5.9e-08	33.1	1.6	5.9e-08	33.1	1.6	1.9	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162825|ref|YP_003401448.1|	-	7.1e-07	29.7	0.5	2e-06	28.3	0.5	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
CCG	PF02754.16	gi|284162825|ref|YP_003401448.1|	-	1.8e-05	24.9	0.1	0.00031	20.9	0.1	2.4	2	0	0	2	2	2	1	Cysteine-rich	domain
Fer4_10	PF13237.6	gi|284162825|ref|YP_003401448.1|	-	6.9e-05	22.9	3.0	0.2	11.8	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162825|ref|YP_003401448.1|	-	0.00017	21.2	9.6	0.057	13.3	4.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|284162825|ref|YP_003401448.1|	-	0.0015	18.5	8.0	0.13	12.4	1.9	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|284162825|ref|YP_003401448.1|	-	0.0018	18.4	7.3	0.054	13.7	8.7	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|284162825|ref|YP_003401448.1|	-	0.011	16.2	8.2	0.38	11.4	1.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162825|ref|YP_003401448.1|	-	0.015	15.3	10.5	0.54	10.4	2.5	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162825|ref|YP_003401448.1|	-	0.078	13.1	3.3	2.6	8.2	0.2	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|284162825|ref|YP_003401448.1|	-	1.1	10.2	10.3	12	6.9	1.0	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|284162825|ref|YP_003401448.1|	-	4.2	8.5	12.5	1.7	9.7	1.6	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
MCR	PF18509.1	gi|284162826|ref|YP_003401449.1|	-	1.4	8.5	8.7	0.14	11.8	1.7	2.6	2	1	0	2	2	2	0	Magnetochrome	domain
Cytochrome_C7	PF14522.6	gi|284162826|ref|YP_003401449.1|	-	2.9	8.0	8.6	96	3.1	8.7	2.7	1	1	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
Paired_CXXCH_1	PF09699.10	gi|284162826|ref|YP_003401449.1|	-	9.5	6.1	12.5	1.6e+03	-1.1	12.5	3.2	1	1	0	1	1	1	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Thg1	PF04446.12	gi|284162827|ref|YP_003401450.1|	-	3.1e-26	91.8	0.6	6.4e-26	90.8	0.6	1.6	1	0	0	1	1	1	1	tRNAHis	guanylyltransferase
Thg1C	PF14413.6	gi|284162827|ref|YP_003401450.1|	-	6e-09	36.1	0.3	8.4e-09	35.6	0.3	1.2	1	0	0	1	1	1	1	Thg1	C	terminal	domain
PRC	PF05239.16	gi|284162828|ref|YP_003401451.1|	-	3.4e-16	59.1	3.1	3.8e-16	58.9	3.1	1.0	1	0	0	1	1	1	1	PRC-barrel	domain
Ribosomal_L1	PF00687.21	gi|284162829|ref|YP_003401452.1|	-	1.5e-45	155.5	0.2	1.8e-45	155.2	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L10	PF00466.20	gi|284162830|ref|YP_003401453.1|	-	6.7e-29	100.0	0.5	6.7e-29	100.0	0.5	2.1	2	0	0	2	2	2	1	Ribosomal	protein	L10
RL10P_insert	PF17777.1	gi|284162830|ref|YP_003401453.1|	-	1.5e-17	63.3	0.2	3.6e-17	62.1	0.2	1.7	1	0	0	1	1	1	1	Insertion	domain	in	60S	ribosomal	protein	L10P
THOC2_N	PF16134.5	gi|284162830|ref|YP_003401453.1|	-	0.11	11.1	4.0	0.22	10.1	4.0	1.3	1	0	0	1	1	1	0	THO	complex	subunit	2	N-terminus
PriA_C	PF18074.1	gi|284162830|ref|YP_003401453.1|	-	0.17	12.7	0.0	0.17	12.7	0.0	2.0	2	0	0	2	2	2	0	Primosomal	protein	N	C-terminal	domain
WRNPLPNID	PF15017.6	gi|284162830|ref|YP_003401453.1|	-	0.43	11.5	12.2	0.91	10.4	12.2	1.5	1	0	0	1	1	1	0	Putative	WW-binding	domain	and	destruction	box
ATP-synt_E	PF05680.12	gi|284162830|ref|YP_003401453.1|	-	5.3	7.4	10.1	1.8	9.0	6.3	2.0	2	0	0	2	2	2	0	ATP	synthase	E	chain
PBP_sp32	PF07222.12	gi|284162830|ref|YP_003401453.1|	-	7.8	5.9	8.2	14	5.1	8.2	1.3	1	0	0	1	1	1	0	Proacrosin	binding	protein	sp32
Ribosomal_60s	PF00428.19	gi|284162831|ref|YP_003401454.1|	-	1.7e-20	73.3	23.7	2.1e-20	73.1	23.7	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
TetR_C_31	PF17940.1	gi|284162831|ref|YP_003401454.1|	-	0.0007	19.8	1.0	0.001	19.3	1.0	1.3	1	0	0	1	1	1	1	Tetracyclin	repressor-like,	C-terminal	domain
EF-hand_14	PF17959.1	gi|284162831|ref|YP_003401454.1|	-	0.093	13.1	0.5	0.21	11.9	0.0	1.7	2	0	0	2	2	2	0	EF-hand	domain
PepSY_2	PF13670.6	gi|284162831|ref|YP_003401454.1|	-	0.22	11.6	12.0	0.28	11.2	1.5	2.2	1	1	1	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
PhetRS_B1	PF18262.1	gi|284162831|ref|YP_003401454.1|	-	0.32	11.2	2.9	2.8	8.2	2.9	2.3	1	1	0	1	1	1	0	Phe-tRNA	synthetase	beta	subunit	B1	domain
Cytomega_UL84	PF06284.11	gi|284162831|ref|YP_003401454.1|	-	0.44	9.0	4.8	0.46	8.9	4.8	1.0	1	0	0	1	1	1	0	Cytomegalovirus	UL84	protein
DUF1682	PF07946.14	gi|284162831|ref|YP_003401454.1|	-	4.4	6.4	8.2	6.7	5.8	8.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1682)
PXPV	PF12778.7	gi|284162831|ref|YP_003401454.1|	-	4.5	7.2	10.7	6.5	6.7	10.7	1.2	1	0	0	1	1	1	0	PXPV	repeat	(3	copies)
Archease	PF01951.16	gi|284162832|ref|YP_003401455.1|	-	7.2e-33	113.7	0.1	8e-33	113.6	0.1	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
CTP_transf_like	PF01467.26	gi|284162833|ref|YP_003401456.1|	-	2.2e-19	70.1	0.0	2.5e-19	69.9	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|284162833|ref|YP_003401456.1|	-	0.0052	16.7	0.0	0.0078	16.1	0.0	1.4	1	0	0	1	1	1	1	FAD	synthetase
Pantoate_ligase	PF02569.15	gi|284162833|ref|YP_003401456.1|	-	0.11	11.7	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	Pantoate-beta-alanine	ligase
Ribosomal_S27e	PF01667.17	gi|284162834|ref|YP_003401457.1|	-	1.1e-26	92.2	2.7	1.2e-26	92.1	2.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.12	gi|284162834|ref|YP_003401457.1|	-	0.0077	15.7	2.5	0.012	15.1	2.5	1.4	1	1	0	1	1	1	1	TFIIB	zinc-binding
Sgf11	PF08209.11	gi|284162834|ref|YP_003401457.1|	-	0.03	13.9	1.6	0.27	10.8	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
TackOD1	PF18551.1	gi|284162834|ref|YP_003401457.1|	-	0.043	13.5	0.3	0.058	13.1	0.3	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
DUF2614	PF11023.8	gi|284162834|ref|YP_003401457.1|	-	0.05	13.7	0.4	0.057	13.5	0.4	1.2	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
zinc_ribbon_6	PF14599.6	gi|284162834|ref|YP_003401457.1|	-	0.093	12.8	1.0	0.13	12.3	1.0	1.2	1	0	0	1	1	1	0	Zinc-ribbon
A2L_zn_ribbon	PF08792.10	gi|284162834|ref|YP_003401457.1|	-	0.16	11.8	2.5	0.43	10.3	0.2	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
eIF-5_eIF-2B	PF01873.17	gi|284162834|ref|YP_003401457.1|	-	0.2	11.5	1.2	0.26	11.2	1.2	1.1	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
Ribosomal_L44	PF00935.19	gi|284162835|ref|YP_003401458.1|	-	1.2e-24	86.6	7.4	1.5e-24	86.3	7.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.20	gi|284162835|ref|YP_003401458.1|	-	0.0001	22.7	5.0	0.011	16.2	1.2	2.5	2	0	0	2	2	2	2	Ribosomal	protein	L33
NOB1_Zn_bind	PF08772.11	gi|284162835|ref|YP_003401458.1|	-	0.0042	17.2	0.5	0.0042	17.2	0.5	2.0	2	0	0	2	2	2	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
Lar_restr_allev	PF14354.6	gi|284162835|ref|YP_003401458.1|	-	0.013	15.9	0.4	0.022	15.1	0.4	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.7	gi|284162835|ref|YP_003401458.1|	-	0.023	14.7	5.2	0.59	10.2	0.1	2.3	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|284162835|ref|YP_003401458.1|	-	0.25	11.3	5.8	2.4	8.2	0.2	2.5	2	1	0	2	2	2	0	Nudix	N-terminal
ThiC_Rad_SAM	PF01964.18	gi|284162836|ref|YP_003401459.1|	-	1.8e-176	587.1	0.1	2e-176	586.9	0.1	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
PIN_9	PF18477.1	gi|284162836|ref|YP_003401459.1|	-	0.0013	19.0	0.2	0.0036	17.6	0.2	1.7	1	0	0	1	1	1	1	PIN	like	domain
Lge1	PF11488.8	gi|284162838|ref|YP_003401461.1|	-	0.024	14.8	1.0	2.7	8.2	0.2	2.4	1	1	0	2	2	2	0	Transcriptional	regulatory	protein	LGE1
S8_pro-domain	PF16470.5	gi|284162838|ref|YP_003401461.1|	-	0.077	13.8	0.0	0.16	12.7	0.0	1.5	1	0	0	1	1	1	0	Peptidase	S8	pro-domain
SpoV	PF08183.11	gi|284162842|ref|YP_003401465.1|	-	0.14	12.1	0.1	0.35	10.9	0.0	1.7	2	0	0	2	2	2	0	Stage	V	sporulation	protein	family
ParD_antitoxin	PF03693.14	gi|284162846|ref|YP_003401469.1|	-	0.0083	16.5	0.0	0.012	16.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	antitoxin	of	ParD	toxin-antitoxin	type	II	system	and	RHH
Lipoprotein_9	PF03180.14	gi|284162846|ref|YP_003401469.1|	-	0.02	14.0	0.0	0.022	13.9	0.0	1.1	1	0	0	1	1	1	0	NLPA	lipoprotein
RHH_1	PF01402.21	gi|284162846|ref|YP_003401469.1|	-	0.067	13.2	1.1	0.068	13.1	0.0	1.6	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
RHH_1	PF01402.21	gi|284162847|ref|YP_003401470.1|	-	0.016	15.1	0.0	0.027	14.4	0.0	1.5	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
RHH_8	PF17723.1	gi|284162847|ref|YP_003401470.1|	-	0.063	13.5	0.0	0.08	13.1	0.0	1.2	1	0	0	1	1	1	0	Ribbon-Helix-Helix	transcriptional	regulator	family
HTH_27	PF13463.6	gi|284162847|ref|YP_003401470.1|	-	0.083	13.4	0.1	0.18	12.3	0.0	1.7	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
TF_Zn_Ribbon	PF08271.12	gi|284162848|ref|YP_003401471.1|	-	0.088	12.3	0.1	0.14	11.7	0.1	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
HTH_7	PF02796.15	gi|284162848|ref|YP_003401471.1|	-	0.098	12.8	0.1	0.24	11.5	0.0	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
zf-H2C2_2	PF13465.6	gi|284162848|ref|YP_003401471.1|	-	0.12	12.8	1.2	0.21	12.1	1.2	1.3	1	0	0	1	1	1	0	Zinc-finger	double	domain
Mltc_N	PF11873.8	gi|284162849|ref|YP_003401472.1|	-	0.038	13.7	0.0	0.056	13.2	0.0	1.2	1	0	0	1	1	1	0	Membrane-bound	lytic	murein	transglycosylase	C,	N-terminal	domain
Pox_G7	PF05503.12	gi|284162849|ref|YP_003401472.1|	-	0.047	12.6	0.1	0.32	9.9	0.0	1.9	2	0	0	2	2	2	0	Poxvirus	G7-like
APG9	PF04109.16	gi|284162851|ref|YP_003401474.1|	-	0.0087	15.1	0.1	0.011	14.8	0.1	1.1	1	0	0	1	1	1	1	Autophagy	protein	Apg9
DUF4199	PF13858.6	gi|284162851|ref|YP_003401474.1|	-	0.061	13.7	0.9	0.097	13.1	0.9	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
DUF1476	PF07345.11	gi|284162851|ref|YP_003401474.1|	-	0.068	13.6	0.1	0.37	11.2	0.0	2.1	2	1	1	3	3	3	0	ATPase	inhibitor	subunit	zeta
DUF3422	PF11902.8	gi|284162851|ref|YP_003401474.1|	-	0.17	11.0	0.1	0.23	10.6	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3422)
JmjN	PF02375.17	gi|284162851|ref|YP_003401474.1|	-	0.45	10.5	3.3	31	4.6	0.0	4.1	5	0	0	5	5	5	0	jmjN	domain
DUF202	PF02656.15	gi|284162852|ref|YP_003401475.1|	-	4.6	7.7	6.6	0.3	11.6	0.3	2.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF202)
Stirrup	PF09061.6	gi|284162856|ref|YP_003401479.1|	-	0.052	13.7	0.0	0.083	13.1	0.0	1.3	1	0	0	1	1	1	0	Stirrup
HEPN_Apea	PF18739.1	gi|284162857|ref|YP_003401480.1|	-	3e-05	24.4	2.3	3e-05	24.4	2.3	2.1	2	1	0	2	2	2	1	Apea-like	HEPN
Phage_TAC_12	PF12363.8	gi|284162857|ref|YP_003401480.1|	-	0.023	15.1	4.4	0.46	10.9	0.3	2.8	1	1	2	3	3	3	0	Phage	tail	assembly	chaperone	protein,	TAC
Sirohm_synth_C	PF14823.6	gi|284162857|ref|YP_003401480.1|	-	0.041	13.5	0.1	2.4	7.9	0.0	2.5	2	1	0	2	2	2	0	Sirohaem	biosynthesis	protein	C-terminal
Utp13	PF08625.11	gi|284162857|ref|YP_003401480.1|	-	0.09	12.7	0.1	0.18	11.7	0.1	1.5	1	0	0	1	1	1	0	Utp13	specific	WD40	associated	domain
Spectrin	PF00435.21	gi|284162857|ref|YP_003401480.1|	-	0.094	13.2	3.0	8.9	6.9	0.5	2.1	2	0	0	2	2	2	0	Spectrin	repeat
Peptidase_C70	PF12385.8	gi|284162858|ref|YP_003401481.1|	-	0.00014	21.9	0.0	0.00044	20.3	0.0	1.8	1	1	0	1	1	1	1	Papain-like	cysteine	protease	AvrRpt2
PepSY	PF03413.19	gi|284162859|ref|YP_003401482.1|	-	0.051	14.1	0.2	1.5	9.5	0.1	3.0	2	1	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
CSTF_C	PF14304.6	gi|284162859|ref|YP_003401482.1|	-	0.064	12.9	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Transcription	termination	and	cleavage	factor	C-terminal
DUF4423	PF14394.6	gi|284162862|ref|YP_003401485.1|	-	0.11	12.3	0.0	0.26	11.0	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DUF1863	PF08937.11	gi|284162864|ref|YP_003401487.1|	-	1.8e-16	60.6	0.0	2.2e-16	60.3	0.0	1.1	1	0	0	1	1	1	1	MTH538	TIR-like	domain	(DUF1863)
TIR_2	PF13676.6	gi|284162864|ref|YP_003401487.1|	-	0.016	15.8	0.0	0.025	15.2	0.0	1.3	1	1	0	1	1	1	0	TIR	domain
ResIII	PF04851.15	gi|284162865|ref|YP_003401488.1|	-	7.6e-27	94.4	0.0	2.6e-26	92.7	0.0	1.8	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
ERCC3_RAD25_C	PF16203.5	gi|284162865|ref|YP_003401488.1|	-	6.5e-24	84.5	0.1	1.1e-23	83.7	0.1	1.3	1	0	0	1	1	1	1	ERCC3/RAD25/XPB	C-terminal	helicase
XPB_DRD	PF18458.1	gi|284162865|ref|YP_003401488.1|	-	5.8e-23	80.5	0.7	1.8e-22	79.0	0.7	1.9	1	0	0	1	1	1	1	Xeroderma	pigmentosum	group	B	helicase	damage	recognition	domain
Helicase_C	PF00271.31	gi|284162865|ref|YP_003401488.1|	-	2.7e-17	63.1	0.1	5.1e-17	62.2	0.1	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|284162865|ref|YP_003401488.1|	-	9.4e-09	35.3	0.0	2.7e-08	33.8	0.0	1.8	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.6	gi|284162865|ref|YP_003401488.1|	-	0.0048	17.2	0.0	0.029	14.6	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
TsaE	PF02367.17	gi|284162865|ref|YP_003401488.1|	-	0.16	12.0	0.0	0.41	10.6	0.0	1.7	1	1	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF790	PF05626.11	gi|284162866|ref|YP_003401489.1|	-	6.8e-127	423.4	4.3	7.7e-127	423.2	4.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
Phage_endo_I	PF05367.11	gi|284162866|ref|YP_003401489.1|	-	0.0019	17.9	0.0	0.0037	16.9	0.0	1.4	1	0	0	1	1	1	1	Phage	endonuclease	I
DUF1064	PF06356.11	gi|284162866|ref|YP_003401489.1|	-	0.0028	18.0	0.8	0.038	14.3	0.0	2.8	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1064)
Hjc	PF01870.18	gi|284162866|ref|YP_003401489.1|	-	0.034	14.1	0.3	0.11	12.5	0.0	2.0	2	0	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
AHJR-like	PF18743.1	gi|284162866|ref|YP_003401489.1|	-	0.045	13.3	0.0	0.13	11.8	0.0	1.7	1	0	0	1	1	1	0	REase_AHJR-like
Phage_holin_3_6	PF07332.11	gi|284162867|ref|YP_003401490.1|	-	0.04	14.0	2.4	0.043	13.9	2.4	1.1	1	0	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
HEPN-like_int	PF18867.1	gi|284162867|ref|YP_003401490.1|	-	0.062	13.2	0.2	0.062	13.2	0.2	1.1	1	0	0	1	1	1	0	HEPN-like	integron	domain
GATase_4	PF13230.6	gi|284162868|ref|YP_003401491.1|	-	6.4e-80	267.9	0.0	1.1e-79	267.1	0.0	1.4	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|284162868|ref|YP_003401491.1|	-	4.1e-07	30.3	0.0	6.7e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
HTH_IclR	PF09339.10	gi|284162868|ref|YP_003401491.1|	-	4e-05	23.3	0.0	0.00013	21.7	0.0	1.8	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|284162868|ref|YP_003401491.1|	-	0.00014	21.7	0.0	0.00094	19.0	0.0	2.1	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.22	gi|284162868|ref|YP_003401491.1|	-	0.018	15.0	0.1	0.096	12.6	0.0	2.3	2	0	0	2	2	2	0	MarR	family
TrmB	PF01978.19	gi|284162868|ref|YP_003401491.1|	-	0.045	13.6	0.0	0.17	11.8	0.0	1.9	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|284162868|ref|YP_003401491.1|	-	0.054	13.5	0.0	0.15	12.1	0.0	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
RPA_C	PF08784.11	gi|284162868|ref|YP_003401491.1|	-	0.055	14.1	0.0	0.11	13.2	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_24	PF13412.6	gi|284162868|ref|YP_003401491.1|	-	0.062	12.9	0.0	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.6	gi|284162868|ref|YP_003401491.1|	-	0.064	13.0	0.0	0.095	12.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
RuvB_C	PF05491.13	gi|284162868|ref|YP_003401491.1|	-	0.066	13.1	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	RuvB	C-terminal	winged	helix	domain
2-Hacid_dh_C	PF02826.19	gi|284162869|ref|YP_003401492.1|	-	0.0028	17.0	0.0	0.064	12.6	0.0	2.1	1	1	1	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Glyco_tran_WecB	PF03808.13	gi|284162869|ref|YP_003401492.1|	-	0.069	13.1	0.0	0.095	12.6	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	WecB/TagA/CpsF	family
ThiF	PF00899.21	gi|284162869|ref|YP_003401492.1|	-	0.16	11.3	1.5	1.6	8.0	0.1	2.5	2	1	1	3	3	3	0	ThiF	family
LTD	PF00932.19	gi|284162871|ref|YP_003401494.1|	-	5.8e-26	91.0	3.1	5.8e-26	91.0	3.1	1.9	2	0	0	2	2	2	1	Lamin	Tail	Domain
SNase	PF00565.17	gi|284162871|ref|YP_003401494.1|	-	8e-26	90.6	0.0	1.3e-25	89.9	0.0	1.4	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
BiPBP_C	PF06832.12	gi|284162871|ref|YP_003401494.1|	-	0.00041	20.3	0.0	0.00098	19.1	0.0	1.5	1	0	0	1	1	1	1	Penicillin-Binding	Protein	C-terminus	Family
RHH_1	PF01402.21	gi|284162872|ref|YP_003401495.1|	-	0.025	14.5	0.0	0.06	13.3	0.0	1.7	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
zf-ACC	PF17848.1	gi|284162872|ref|YP_003401495.1|	-	0.053	13.6	0.2	9	6.5	0.0	2.7	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
VAPB_antitox	PF02697.14	gi|284162872|ref|YP_003401495.1|	-	0.1	13.4	0.3	0.57	11.0	0.1	2.3	2	0	0	2	2	2	0	Putative	antitoxin
TF_Zn_Ribbon	PF08271.12	gi|284162872|ref|YP_003401495.1|	-	0.15	11.6	0.2	0.37	10.3	0.2	1.7	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF4268	PF14088.6	gi|284162873|ref|YP_003401496.1|	-	3.7e-33	114.3	0.5	1.1e-32	112.8	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4268)
NucS	PF01939.16	gi|284162873|ref|YP_003401496.1|	-	0.032	13.6	0.2	0.074	12.4	0.1	1.6	2	0	0	2	2	2	0	Endonuclease	NucS
AAA_5	PF07728.14	gi|284162875|ref|YP_003401498.1|	-	6.5e-14	52.1	0.0	1.2e-13	51.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|284162875|ref|YP_003401498.1|	-	2.3e-06	28.1	0.0	9.3e-06	26.1	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|284162875|ref|YP_003401498.1|	-	0.0022	17.8	0.0	0.0092	15.7	0.0	1.9	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|284162875|ref|YP_003401498.1|	-	0.025	14.1	0.0	0.046	13.2	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
EVE	PF01878.18	gi|284162875|ref|YP_003401498.1|	-	0.039	13.9	0.1	0.12	12.4	0.1	1.8	1	0	0	1	1	1	0	EVE	domain
Mg_chelatase	PF01078.21	gi|284162875|ref|YP_003401498.1|	-	0.05	13.0	0.0	0.099	12.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.22	gi|284162875|ref|YP_003401498.1|	-	0.068	13.6	0.0	0.17	12.3	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Yos1	PF08571.10	gi|284162875|ref|YP_003401498.1|	-	0.11	12.8	0.0	0.22	11.8	0.0	1.4	1	0	0	1	1	1	0	Yos1-like
LPD11	PF18824.1	gi|284162875|ref|YP_003401498.1|	-	0.12	12.4	0.0	0.33	11.1	0.0	1.7	1	0	0	1	1	1	0	Large	polyvalent	protein-associated	domain	11
AAA_16	PF13191.6	gi|284162875|ref|YP_003401498.1|	-	0.21	12.0	0.0	1.2	9.5	0.0	2.1	1	1	1	2	2	2	0	AAA	ATPase	domain
SNase	PF00565.17	gi|284162876|ref|YP_003401499.1|	-	3.4e-26	91.8	0.0	4.3e-26	91.5	0.0	1.1	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
Excalibur	PF05901.11	gi|284162876|ref|YP_003401499.1|	-	2.3	8.9	5.1	10	6.9	5.1	2.2	1	1	0	1	1	1	0	Excalibur	calcium-binding	domain
DUF2400	PF09674.10	gi|284162877|ref|YP_003401500.1|	-	1.8e-29	103.4	0.0	3.1e-29	102.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2400)
DUF4377	PF14302.6	gi|284162877|ref|YP_003401500.1|	-	0.093	12.8	0.0	0.28	11.3	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4377)
VAPB_antitox	PF02697.14	gi|284162878|ref|YP_003401501.1|	-	0.00024	21.8	2.2	0.00029	21.6	2.2	1.1	1	0	0	1	1	1	1	Putative	antitoxin
MatP_C	PF17414.2	gi|284162878|ref|YP_003401501.1|	-	0.027	14.7	1.0	0.059	13.6	0.4	1.8	1	1	1	2	2	2	0	MatP	C-terminal	ribbon-helix-helix	domain
TBCA	PF02970.16	gi|284162878|ref|YP_003401501.1|	-	0.029	14.7	0.3	0.041	14.2	0.3	1.4	1	1	0	1	1	1	0	Tubulin	binding	cofactor	A
KELK	PF15796.5	gi|284162878|ref|YP_003401501.1|	-	0.035	14.6	0.9	0.04	14.4	0.9	1.1	1	0	0	1	1	1	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
TMF_DNA_bd	PF12329.8	gi|284162878|ref|YP_003401501.1|	-	0.056	13.4	0.8	0.072	13.1	0.8	1.2	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
RHH_1	PF01402.21	gi|284162878|ref|YP_003401501.1|	-	0.087	12.8	0.9	0.2	11.6	0.4	1.9	1	1	1	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
RBD-FIP	PF09457.10	gi|284162878|ref|YP_003401501.1|	-	3.2	7.8	6.2	10	6.1	2.6	2.3	2	1	0	2	2	2	0	FIP	domain
Potyvirid-P3	PF13608.6	gi|284162880|ref|YP_003401503.1|	-	0.37	9.8	2.8	0.45	9.5	2.8	1.2	1	0	0	1	1	1	0	Protein	P3	of	Potyviral	polyprotein
Hom_end_hint	PF05203.16	gi|284162880|ref|YP_003401503.1|	-	0.54	10.2	2.1	0.63	10.0	2.1	1.0	1	0	0	1	1	1	0	Hom_end-associated	Hint
Pox_A32	PF04665.12	gi|284162882|ref|YP_003401505.1|	-	0.15	11.5	1.0	4.5	6.6	0.1	2.7	3	0	0	3	3	3	0	Poxvirus	A32	protein
HTH_43	PF09904.9	gi|284162884|ref|YP_003401507.1|	-	0.1	12.5	0.0	0.23	11.4	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF1275	PF06912.11	gi|284162884|ref|YP_003401507.1|	-	0.62	10.0	11.3	0.13	12.2	1.1	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1275)
SbsC_C	PF18058.1	gi|284162885|ref|YP_003401508.1|	-	0.00069	19.9	5.8	0.00096	19.4	5.8	1.2	1	0	0	1	1	1	1	SbsC	C-terminal	domain
Tex_YqgF	PF16921.5	gi|284162886|ref|YP_003401509.1|	-	0.057	13.9	0.1	1.9	8.9	0.0	2.4	2	0	0	2	2	2	0	Tex	protein	YqgF-like	domain
DASH_Dad4	PF08650.10	gi|284162886|ref|YP_003401509.1|	-	5.2	7.1	6.5	5.2	7.1	0.3	2.7	2	0	0	2	2	2	0	DASH	complex	subunit	Dad4
DUF2116	PF09889.9	gi|284162888|ref|YP_003401511.1|	-	4.6	7.3	5.8	4.1	7.4	0.5	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
RHH_1	PF01402.21	gi|284162889|ref|YP_003401512.1|	-	1.6e-05	24.7	1.2	0.00033	20.5	0.0	2.6	2	1	1	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
IF2_N	PF04760.15	gi|284162889|ref|YP_003401512.1|	-	0.0097	15.7	0.0	0.014	15.2	0.0	1.4	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
PSK_trans_fac	PF07704.11	gi|284162889|ref|YP_003401512.1|	-	0.019	15.7	0.0	0.029	15.1	0.0	1.4	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
HTH_5	PF01022.20	gi|284162889|ref|YP_003401512.1|	-	0.075	12.9	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_AsnC-type	PF13404.6	gi|284162889|ref|YP_003401512.1|	-	0.095	12.5	0.0	0.15	11.9	0.0	1.3	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
RAB3GAP2_C	PF14656.6	gi|284162889|ref|YP_003401512.1|	-	0.13	10.4	0.0	0.13	10.4	0.0	1.0	1	0	0	1	1	1	0	Rab3	GTPase-activating	protein	regulatory	subunit	C-terminus
Phage_integr_3	PF16795.5	gi|284162890|ref|YP_003401513.1|	-	1.7e-47	161.3	0.5	2.8e-47	160.6	0.5	1.4	1	0	0	1	1	1	1	Archaeal	phage	integrase
CH	PF00307.31	gi|284162890|ref|YP_003401513.1|	-	0.019	15.1	0.0	0.055	13.7	0.0	1.8	2	0	0	2	2	2	0	Calponin	homology	(CH)	domain
RraA-like	PF03737.15	gi|284162891|ref|YP_003401514.1|	-	1.7e-44	151.6	4.6	1.7e-44	151.6	4.6	1.9	2	0	0	2	2	2	1	Aldolase/RraA
OMPdecase	PF00215.24	gi|284162891|ref|YP_003401514.1|	-	6.4e-24	84.8	2.5	1.3e-23	83.8	2.5	1.5	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
ThiG	PF05690.14	gi|284162891|ref|YP_003401514.1|	-	9.6e-06	25.1	0.3	5.5e-05	22.6	0.1	2.1	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
His_biosynth	PF00977.21	gi|284162891|ref|YP_003401514.1|	-	1.3e-05	24.8	0.2	5.2e-05	22.8	0.1	1.9	1	1	0	1	1	1	1	Histidine	biosynthesis	protein
NMO	PF03060.15	gi|284162891|ref|YP_003401514.1|	-	0.00072	19.0	1.7	0.0023	17.4	1.4	1.8	1	1	1	2	2	2	1	Nitronate	monooxygenase
HMGL-like	PF00682.19	gi|284162891|ref|YP_003401514.1|	-	0.0017	18.0	5.2	0.19	11.3	0.9	2.4	1	1	1	2	2	2	2	HMGL-like
DeoC	PF01791.9	gi|284162891|ref|YP_003401514.1|	-	0.0022	17.6	1.1	0.042	13.5	0.1	2.8	1	1	1	3	3	3	1	DeoC/LacD	family	aldolase
DUF561	PF04481.12	gi|284162891|ref|YP_003401514.1|	-	0.0033	16.6	1.9	0.016	14.4	0.6	2.7	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
TMP-TENI	PF02581.17	gi|284162891|ref|YP_003401514.1|	-	0.0056	16.0	0.3	0.023	14.0	0.3	2.1	1	1	0	1	1	1	1	Thiamine	monophosphate	synthase
PEP_mutase	PF13714.6	gi|284162891|ref|YP_003401514.1|	-	0.012	15.1	0.2	0.65	9.4	0.0	2.5	1	1	1	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Trp_syntA	PF00290.20	gi|284162891|ref|YP_003401514.1|	-	0.019	13.8	2.8	0.28	10.0	0.3	2.9	2	1	1	3	3	3	0	Tryptophan	synthase	alpha	chain
PdxJ	PF03740.13	gi|284162891|ref|YP_003401514.1|	-	0.033	13.3	0.0	0.36	9.9	0.0	2.4	2	0	0	2	2	2	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
DUF3172	PF11371.8	gi|284162891|ref|YP_003401514.1|	-	0.14	11.9	0.0	7.3	6.3	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3172)
Ribul_P_3_epim	PF00834.19	gi|284162891|ref|YP_003401514.1|	-	0.68	9.3	6.4	0.078	12.4	0.9	2.4	3	1	0	3	3	3	0	Ribulose-phosphate	3	epimerase	family
SSF	PF00474.17	gi|284162892|ref|YP_003401515.1|	-	1.6e-77	261.1	29.0	2.6e-77	260.4	29.0	1.3	1	0	0	1	1	1	1	Sodium:solute	symporter	family
Presenilin	PF01080.17	gi|284162892|ref|YP_003401515.1|	-	0.0058	15.5	2.4	0.0058	15.5	2.4	1.8	2	0	0	2	2	2	1	Presenilin
RsbU_N	PF08673.10	gi|284162892|ref|YP_003401515.1|	-	0.068	13.3	0.3	5.2	7.2	0.1	2.3	2	0	0	2	2	2	0	Phosphoserine	phosphatase	RsbU,	N-terminal	domain
DUF4448	PF14610.6	gi|284162893|ref|YP_003401516.1|	-	1	9.1	2.7	1.2	8.9	2.7	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4448)
DNA_primase_S	PF01896.19	gi|284162895|ref|YP_003401518.1|	-	1.2e-24	87.3	0.4	1.8e-24	86.8	0.4	1.2	1	0	0	1	1	1	1	DNA	primase	small	subunit
MREG	PF15812.5	gi|284162896|ref|YP_003401519.1|	-	0.0012	19.2	0.8	0.0016	18.8	0.8	1.3	1	0	0	1	1	1	1	Melanoregulin
WD40_alt	PF14077.6	gi|284162896|ref|YP_003401519.1|	-	0.011	15.6	0.5	0.011	15.6	0.5	3.2	3	1	0	3	3	3	0	Alternative	WD40	repeat	motif
Cytochrom_B562	PF07361.11	gi|284162896|ref|YP_003401519.1|	-	0.064	13.9	0.0	0.14	12.9	0.0	1.5	1	0	0	1	1	1	0	Cytochrome	b562
Usp	PF00582.26	gi|284162897|ref|YP_003401520.1|	-	0.0053	17.3	0.0	0.0062	17.1	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
CPSase_L_D3	PF02787.19	gi|284162897|ref|YP_003401520.1|	-	0.1	13.0	0.1	0.13	12.6	0.1	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
TauE	PF01925.19	gi|284162898|ref|YP_003401521.1|	-	1.8e-33	116.2	45.2	1.8e-33	116.2	45.2	1.5	2	0	0	2	2	2	1	Sulfite	exporter	TauE/SafE
Cation_ATPase_C	PF00689.21	gi|284162899|ref|YP_003401522.1|	-	3.4e-05	23.7	0.4	4.1e-05	23.4	0.4	1.1	1	0	0	1	1	1	1	Cation	transporting	ATPase,	C-terminus
PsbN	PF02468.15	gi|284162899|ref|YP_003401522.1|	-	0.041	13.7	2.9	0.041	13.7	2.9	3.1	3	1	0	3	3	3	0	Photosystem	II	reaction	centre	N	protein	(psbN)
Trp_oprn_chp	PF09534.10	gi|284162899|ref|YP_003401522.1|	-	0.59	9.9	3.4	0.82	9.4	0.0	2.0	1	1	1	2	2	2	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
SAYSvFN	PF10260.9	gi|284162899|ref|YP_003401522.1|	-	2.3	8.2	8.1	0.18	11.8	2.7	1.8	2	0	0	2	2	2	0	Uncharacterized	conserved	domain	(SAYSvFN)
RHH_1	PF01402.21	gi|284162900|ref|YP_003401523.1|	-	5.8e-07	29.2	0.5	1.9e-06	27.6	0.5	1.9	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_4	PF13467.6	gi|284162900|ref|YP_003401523.1|	-	0.042	13.7	0.1	8.8	6.3	0.0	2.5	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
Clr5	PF14420.6	gi|284162900|ref|YP_003401523.1|	-	0.13	12.5	0.9	10	6.4	0.1	2.6	2	1	0	2	2	2	0	Clr5	domain
DUF1002	PF06207.11	gi|284162900|ref|YP_003401523.1|	-	0.15	11.6	0.7	0.67	9.5	0.5	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1002)
vATP-synt_E	PF01991.18	gi|284162900|ref|YP_003401523.1|	-	0.16	11.4	3.5	0.48	9.8	3.1	1.7	1	1	1	2	2	2	0	ATP	synthase	(E/31	kDa)	subunit
Usp	PF00582.26	gi|284162901|ref|YP_003401524.1|	-	1.5e-08	35.2	0.0	1.9e-08	34.9	0.0	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
OTCace	PF00185.24	gi|284162901|ref|YP_003401524.1|	-	0.0026	17.8	0.0	0.003	17.6	0.0	1.1	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Homeodomain	PF00046.29	gi|284162901|ref|YP_003401524.1|	-	0.084	12.7	0.1	0.87	9.5	0.1	2.1	2	0	0	2	2	2	0	Homeodomain
TauE	PF01925.19	gi|284162902|ref|YP_003401525.1|	-	2.2e-31	109.3	34.5	2.2e-31	109.3	34.5	2.2	2	1	0	2	2	2	1	Sulfite	exporter	TauE/SafE
Imm65	PF15582.6	gi|284162902|ref|YP_003401525.1|	-	0.033	13.0	0.0	0.05	12.5	0.0	1.2	1	0	0	1	1	1	0	Immunity	protein	65
DUF5353	PF17304.2	gi|284162902|ref|YP_003401525.1|	-	0.14	11.9	0.5	0.96	9.2	0.1	2.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5353)
Usp	PF00582.26	gi|284162903|ref|YP_003401526.1|	-	2.1e-34	119.0	1.5	2.5e-20	73.4	0.0	3.1	2	1	1	3	3	3	3	Universal	stress	protein	family
DUF1624	PF07786.12	gi|284162904|ref|YP_003401527.1|	-	7e-58	195.8	17.2	8.1e-58	195.6	17.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1624)
Tubulin	PF00091.25	gi|284162905|ref|YP_003401528.1|	-	1.8e-45	155.6	0.1	2.8e-45	154.9	0.1	1.3	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|284162905|ref|YP_003401528.1|	-	1.1e-38	131.5	0.7	2.4e-38	130.3	0.7	1.6	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
NAD_binding_10	PF13460.6	gi|284162905|ref|YP_003401528.1|	-	0.022	14.7	0.2	0.063	13.2	0.1	1.8	2	0	0	2	2	2	0	NAD(P)H-binding
Tubulin_2	PF13809.6	gi|284162905|ref|YP_003401528.1|	-	0.09	12.0	6.5	0.52	9.4	1.8	2.5	2	1	0	2	2	2	0	Tubulin	like
ABC_tran	PF00005.27	gi|284162906|ref|YP_003401529.1|	-	2.2e-33	115.7	0.0	3.8e-33	114.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|284162906|ref|YP_003401529.1|	-	7.3e-06	26.0	1.9	0.013	15.3	0.3	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|284162906|ref|YP_003401529.1|	-	0.00031	20.3	0.0	0.01	15.3	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.6	gi|284162906|ref|YP_003401529.1|	-	0.0021	18.3	0.2	0.035	14.4	0.2	2.4	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.6	gi|284162906|ref|YP_003401529.1|	-	0.011	15.5	0.0	0.02	14.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|284162906|ref|YP_003401529.1|	-	0.032	14.2	0.0	0.072	13.0	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
TOBE_2	PF08402.10	gi|284162906|ref|YP_003401529.1|	-	0.046	13.9	0.0	0.29	11.3	0.0	2.2	2	0	0	2	2	2	0	TOBE	domain
TOBE	PF03459.17	gi|284162906|ref|YP_003401529.1|	-	0.078	13.3	0.3	0.42	10.9	0.1	2.3	3	0	0	3	3	3	0	TOBE	domain
AAA_16	PF13191.6	gi|284162906|ref|YP_003401529.1|	-	0.084	13.3	0.0	0.13	12.6	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|284162906|ref|YP_003401529.1|	-	0.13	11.9	0.0	0.3	10.8	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
BPD_transp_1	PF00528.22	gi|284162907|ref|YP_003401530.1|	-	3.5e-23	82.3	9.1	3.5e-23	82.3	9.1	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.6	gi|284162908|ref|YP_003401531.1|	-	1.9e-31	109.6	0.0	2.5e-31	109.2	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|284162908|ref|YP_003401531.1|	-	1.5e-10	41.6	0.1	4.6e-10	40.0	0.1	1.7	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|284162908|ref|YP_003401531.1|	-	0.061	12.7	0.0	0.14	11.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
HTH_1	PF00126.27	gi|284162909|ref|YP_003401532.1|	-	1e-10	41.4	0.0	1.5e-10	40.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
NUMOD1	PF07453.13	gi|284162909|ref|YP_003401532.1|	-	2.3e-05	24.5	0.1	5.8e-05	23.2	0.1	1.7	1	0	0	1	1	1	1	NUMOD1	domain
HTH_23	PF13384.6	gi|284162909|ref|YP_003401532.1|	-	0.0067	16.2	0.0	0.0091	15.8	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_45	PF14947.6	gi|284162909|ref|YP_003401532.1|	-	0.014	15.3	0.1	0.032	14.2	0.1	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix
HTH_29	PF13551.6	gi|284162909|ref|YP_003401532.1|	-	0.033	14.2	0.0	0.058	13.4	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
BPL_LplA_LipB	PF03099.19	gi|284162911|ref|YP_003401534.1|	-	2.8e-14	53.1	0.0	6.9e-14	51.9	0.0	1.6	2	0	0	2	2	2	1	Biotin/lipoate	A/B	protein	ligase	family
HTH_11	PF08279.12	gi|284162911|ref|YP_003401534.1|	-	4.7e-12	45.7	0.1	8.6e-12	44.8	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
BPL_C	PF02237.17	gi|284162911|ref|YP_003401534.1|	-	3.3e-06	26.9	0.5	7.5e-06	25.8	0.5	1.6	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
HTH_24	PF13412.6	gi|284162911|ref|YP_003401534.1|	-	6.4e-05	22.4	0.1	0.00012	21.6	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|284162911|ref|YP_003401534.1|	-	0.0022	17.9	0.3	0.012	15.4	0.1	2.2	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.19	gi|284162911|ref|YP_003401534.1|	-	0.0035	17.5	0.0	0.0075	16.4	0.0	1.6	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Tnp_4	PF13613.6	gi|284162911|ref|YP_003401534.1|	-	0.006	16.3	0.0	0.01	15.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_Crp_2	PF13545.6	gi|284162911|ref|YP_003401534.1|	-	0.008	16.1	0.0	0.018	15.0	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_29	PF13551.6	gi|284162911|ref|YP_003401534.1|	-	0.015	15.3	0.0	0.038	14.0	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn	helix
MarR_2	PF12802.7	gi|284162911|ref|YP_003401534.1|	-	0.02	14.7	0.0	0.04	13.8	0.0	1.5	1	0	0	1	1	1	0	MarR	family
YdaS_antitoxin	PF15943.5	gi|284162911|ref|YP_003401534.1|	-	0.041	13.7	0.0	0.12	12.3	0.0	1.8	2	0	0	2	2	2	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_36	PF13730.6	gi|284162911|ref|YP_003401534.1|	-	0.042	13.8	0.0	0.079	12.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|284162911|ref|YP_003401534.1|	-	0.044	14.1	0.1	0.27	11.6	0.0	2.1	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_23	PF13384.6	gi|284162911|ref|YP_003401534.1|	-	0.046	13.5	0.0	0.14	12.0	0.0	1.8	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_AsnC-type	PF13404.6	gi|284162911|ref|YP_003401534.1|	-	0.048	13.5	0.0	0.096	12.5	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_1	PF00126.27	gi|284162911|ref|YP_003401534.1|	-	0.051	13.5	0.0	0.28	11.2	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
GntR	PF00392.21	gi|284162911|ref|YP_003401534.1|	-	0.057	13.1	0.1	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_10	PF04967.12	gi|284162911|ref|YP_003401534.1|	-	0.065	13.1	0.0	0.13	12.1	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_CodY	PF08222.11	gi|284162911|ref|YP_003401534.1|	-	0.076	12.6	0.1	0.18	11.4	0.1	1.6	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_6	PF01418.17	gi|284162911|ref|YP_003401534.1|	-	0.099	12.6	0.0	0.18	11.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
MarR	PF01047.22	gi|284162911|ref|YP_003401534.1|	-	0.18	11.8	0.0	0.31	11.0	0.0	1.3	1	0	0	1	1	1	0	MarR	family
Semialdhyde_dhC	PF02774.18	gi|284162912|ref|YP_003401535.1|	-	2.3e-40	138.7	0.0	3.7e-40	138.0	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.24	gi|284162912|ref|YP_003401535.1|	-	5.9e-37	126.8	0.0	9e-37	126.2	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.20	gi|284162912|ref|YP_003401535.1|	-	0.0022	17.6	0.0	0.0052	16.4	0.0	1.6	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|284162912|ref|YP_003401535.1|	-	0.019	15.1	0.0	0.036	14.2	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
DXP_reductoisom	PF02670.16	gi|284162912|ref|YP_003401535.1|	-	0.037	14.8	0.0	0.078	13.7	0.0	1.5	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Ldh_1_N	PF00056.23	gi|284162912|ref|YP_003401535.1|	-	0.076	13.1	0.0	0.17	12.0	0.0	1.6	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|284162912|ref|YP_003401535.1|	-	0.1	12.9	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|284162912|ref|YP_003401535.1|	-	0.13	12.1	0.0	0.27	11.1	0.0	1.5	2	0	0	2	2	2	0	NAD(P)H-binding
DUF2298	PF10060.9	gi|284162913|ref|YP_003401536.1|	-	3.6e-72	243.7	43.0	1.2e-70	238.6	43.0	2.4	1	1	0	1	1	1	1	Uncharacterized	membrane	protein	(DUF2298)
TFIIE_alpha	PF02002.17	gi|284162914|ref|YP_003401537.1|	-	4.7e-25	87.5	4.8	4.7e-25	87.5	4.8	1.5	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TF_Zn_Ribbon	PF08271.12	gi|284162914|ref|YP_003401537.1|	-	0.0049	16.4	1.8	0.01	15.4	1.8	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Fer2_3	PF13085.6	gi|284162914|ref|YP_003401537.1|	-	0.011	15.7	0.9	0.016	15.2	0.3	1.6	2	0	0	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Phage_rep_org_N	PF09681.10	gi|284162914|ref|YP_003401537.1|	-	0.015	15.2	0.4	0.061	13.2	0.1	2.1	1	1	2	3	3	3	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
PHD_Oberon	PF07227.11	gi|284162914|ref|YP_003401537.1|	-	0.058	13.3	0.2	0.11	12.3	0.2	1.5	1	1	0	1	1	1	0	PHD	-	plant	homeodomain	finger	protein
Mu-like_Com	PF10122.9	gi|284162914|ref|YP_003401537.1|	-	0.073	12.5	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
Ribonuc_red_lgN	PF00317.21	gi|284162914|ref|YP_003401537.1|	-	0.13	12.3	0.2	0.2	11.7	0.2	1.7	1	1	0	1	1	1	0	Ribonucleotide	reductase,	all-alpha	domain
Imm7	PF15585.6	gi|284162914|ref|YP_003401537.1|	-	0.21	11.9	1.3	1.2	9.4	0.1	2.4	3	0	0	3	3	3	0	Immunity	protein	7
zinc_ribbon_10	PF10058.9	gi|284162914|ref|YP_003401537.1|	-	0.25	11.1	2.3	0.62	9.8	1.4	2.0	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
HU-CCDC81_bac_2	PF18175.1	gi|284162914|ref|YP_003401537.1|	-	0.26	11.2	2.1	1.5	8.8	0.1	2.4	2	0	0	2	2	2	0	CCDC81-like	prokaryotic	HU	domain	2
TPD	PF14811.6	gi|284162915|ref|YP_003401538.1|	-	1.3e-28	99.6	0.1	2e-28	98.9	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	TPD	sequence-motif
DUF5591	PF17884.1	gi|284162916|ref|YP_003401539.1|	-	1.9e-43	148.0	0.0	3.8e-43	147.0	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
PUA	PF01472.20	gi|284162916|ref|YP_003401539.1|	-	2.7e-09	36.8	0.0	7.2e-09	35.5	0.1	1.7	2	0	0	2	2	2	1	PUA	domain
TGT	PF01702.18	gi|284162916|ref|YP_003401539.1|	-	1.6e-07	30.8	0.0	4.8e-06	26.0	0.0	2.5	3	0	0	3	3	3	1	Queuine	tRNA-ribosyltransferase
TGT	PF01702.18	gi|284162917|ref|YP_003401540.1|	-	1.2e-83	281.2	0.0	1.5e-83	280.8	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF5591	PF17884.1	gi|284162917|ref|YP_003401540.1|	-	2.5e-06	27.4	0.0	4.9e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
TMEM135_C_rich	PF15982.5	gi|284162917|ref|YP_003401540.1|	-	0.038	14.6	0.0	0.07	13.7	0.0	1.3	1	0	0	1	1	1	0	N-terminal	cysteine-rich	region	of	Transmembrane	protein	135
LigD_N	PF13298.6	gi|284162918|ref|YP_003401541.1|	-	1.7e-26	92.6	0.0	1.9e-26	92.3	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	Ligase	(LigD)
HemS	PF05171.12	gi|284162918|ref|YP_003401541.1|	-	0.078	12.9	0.0	0.28	11.1	0.0	1.8	2	0	0	2	2	2	0	Haemin-degrading	HemS.ChuX	domain
Toprim_4	PF13662.6	gi|284162919|ref|YP_003401542.1|	-	1.6e-14	54.1	1.5	3.4e-14	53.1	0.5	2.1	2	0	0	2	2	2	1	Toprim	domain
Toprim_2	PF13155.6	gi|284162919|ref|YP_003401542.1|	-	4.6e-07	30.2	0.0	1.2e-06	28.8	0.0	1.8	1	0	0	1	1	1	1	Toprim-like
Toprim	PF01751.22	gi|284162919|ref|YP_003401542.1|	-	0.016	15.4	0.3	0.016	15.4	0.3	3.3	2	2	1	3	3	3	0	Toprim	domain
PBSX_XtrA	PF17356.2	gi|284162919|ref|YP_003401542.1|	-	0.066	13.1	0.1	0.29	11.1	0.0	2.1	2	0	0	2	2	2	0	Phage-like	element	PBSX	protein	XtrA
DNA_ligase_A_N	PF04675.14	gi|284162919|ref|YP_003401542.1|	-	0.6	10.4	4.3	3.3	8.0	4.3	2.0	1	1	0	1	1	1	0	DNA	ligase	N	terminus
Mnd1	PF03962.15	gi|284162919|ref|YP_003401542.1|	-	1.1	9.6	4.0	4.9	7.5	0.2	3.4	3	0	0	3	3	3	0	Mnd1	HTH	domain
Wyosine_form	PF08608.12	gi|284162920|ref|YP_003401543.1|	-	4.5e-21	75.0	0.0	9.6e-21	73.9	0.0	1.6	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.21	gi|284162920|ref|YP_003401543.1|	-	1.9e-20	73.9	0.0	1.7e-19	70.8	0.0	2.2	2	1	0	2	2	2	1	Radical	SAM	superfamily
RHH_6	PF16762.5	gi|284162921|ref|YP_003401544.1|	-	3.2e-05	24.5	0.0	3.4e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
SPOUT_MTase_2	PF14419.6	gi|284162922|ref|YP_003401545.1|	-	6.5e-83	276.3	1.8	9.6e-83	275.8	1.8	1.3	1	0	0	1	1	1	1	AF2226-like	SPOUT	RNA	Methylase	fused	to	THUMP
THUMP	PF02926.17	gi|284162922|ref|YP_003401545.1|	-	1.5e-23	83.5	5.1	1.5e-23	83.5	5.1	1.8	2	0	0	2	2	2	1	THUMP	domain
Methyltrn_RNA_4	PF09936.9	gi|284162922|ref|YP_003401545.1|	-	0.012	15.5	0.0	0.024	14.5	0.0	1.4	1	0	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
SpoU_methylase	PF00588.19	gi|284162922|ref|YP_003401545.1|	-	0.023	14.9	0.0	0.37	11.0	0.0	2.2	1	1	0	1	1	1	0	SpoU	rRNA	Methylase	family
DUF2258	PF10015.9	gi|284162923|ref|YP_003401546.1|	-	5.9e-31	106.4	2.6	5.9e-31	106.4	2.6	1.9	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
ssDBP_DBD	PF18361.1	gi|284162923|ref|YP_003401546.1|	-	0.019	15.1	0.3	0.034	14.3	0.2	1.5	1	1	0	1	1	1	0	Single	stranded	DNA-binding	protein	ss	DNA	binding	domain
Transposase_22	PF02994.14	gi|284162923|ref|YP_003401546.1|	-	0.056	13.6	1.2	0.68	10.1	0.1	2.5	3	0	0	3	3	3	0	L1	transposable	element	RBD-like	domain
DUF3213	PF11491.8	gi|284162923|ref|YP_003401546.1|	-	0.2	11.8	11.5	0.48	10.6	3.1	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3213)
MazE_antitoxin	PF04014.18	gi|284162924|ref|YP_003401547.1|	-	2.4e-09	36.9	1.4	3.8e-09	36.3	1.4	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Rho_RNA_bind	PF07497.12	gi|284162924|ref|YP_003401547.1|	-	0.019	14.8	0.2	0.025	14.4	0.2	1.3	1	1	0	1	1	1	0	Rho	termination	factor,	RNA-binding	domain
eIF-1a	PF01176.19	gi|284162924|ref|YP_003401547.1|	-	0.029	14.2	0.2	0.056	13.2	0.1	1.7	1	1	1	2	2	2	0	Translation	initiation	factor	1A	/	IF-1
DUF1905	PF08922.11	gi|284162924|ref|YP_003401547.1|	-	0.058	13.5	0.1	0.24	11.5	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
OrfB_Zn_ribbon	PF07282.11	gi|284162926|ref|YP_003401549.1|	-	9e-27	92.8	0.3	1.8e-26	91.8	0.3	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.19	gi|284162926|ref|YP_003401549.1|	-	1.6e-07	31.6	1.1	4.2e-07	30.2	1.1	1.7	1	0	0	1	1	1	1	Probable	transposase
TF_Zn_Ribbon	PF08271.12	gi|284162926|ref|YP_003401549.1|	-	0.0051	16.3	0.7	0.62	9.6	1.0	2.3	1	1	1	2	2	2	2	TFIIB	zinc-binding
Phage_FRD3	PF05798.11	gi|284162926|ref|YP_003401549.1|	-	0.0098	16.2	0.0	0.026	14.8	0.0	1.7	1	0	0	1	1	1	1	Bacteriophage	FRD3	protein
RuvC_1	PF18516.1	gi|284162926|ref|YP_003401549.1|	-	0.01	15.1	6.3	0.09	11.9	6.3	2.1	1	1	0	1	1	1	0	RuvC	nuclease	domain
HP1451_C	PF18472.1	gi|284162926|ref|YP_003401549.1|	-	0.019	15.0	0.1	0.092	12.7	0.0	2.3	2	1	0	2	2	2	0	HP1451	C-terminal	domain
FYVE	PF01363.21	gi|284162926|ref|YP_003401549.1|	-	0.021	14.9	0.6	0.039	14.1	0.6	1.4	1	0	0	1	1	1	0	FYVE	zinc	finger
HypA	PF01155.19	gi|284162926|ref|YP_003401549.1|	-	0.022	14.8	0.2	0.046	13.7	0.1	1.6	2	0	0	2	2	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-ribbon_3	PF13248.6	gi|284162926|ref|YP_003401549.1|	-	0.03	13.7	1.1	1.1	8.8	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
C1_1	PF00130.22	gi|284162926|ref|YP_003401549.1|	-	0.056	13.3	0.4	0.12	12.2	0.4	1.5	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DZR	PF12773.7	gi|284162926|ref|YP_003401549.1|	-	0.078	13.0	0.2	0.14	12.2	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF4090	PF13319.6	gi|284162926|ref|YP_003401549.1|	-	0.079	13.2	0.9	0.21	11.9	0.9	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4090)
PRELI	PF04707.14	gi|284162926|ref|YP_003401549.1|	-	0.08	12.8	0.1	0.22	11.4	0.1	1.7	1	0	0	1	1	1	0	PRELI-like	family
zinc_ribbon_2	PF13240.6	gi|284162926|ref|YP_003401549.1|	-	0.11	12.2	2.4	8.1	6.3	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
C1_2	PF03107.16	gi|284162926|ref|YP_003401549.1|	-	0.12	12.7	0.5	0.21	11.9	0.5	1.4	1	0	0	1	1	1	0	C1	domain
UPF0547	PF10571.9	gi|284162926|ref|YP_003401549.1|	-	0.21	11.7	2.3	0.8	9.8	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Auto_anti-p27	PF06677.12	gi|284162926|ref|YP_003401549.1|	-	0.26	11.5	2.0	0.96	9.7	2.4	1.7	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C2H2_3	PF13878.6	gi|284162926|ref|YP_003401549.1|	-	0.87	9.5	3.6	4.5	7.2	1.1	2.4	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Rubredoxin_2	PF18073.1	gi|284162926|ref|YP_003401549.1|	-	3.2	7.5	5.4	24	4.7	5.4	2.2	1	1	0	1	1	1	0	Rubredoxin	metal	binding	domain
PGF-CTERM	PF18204.1	gi|284162928|ref|YP_003401551.1|	-	2.9e-10	39.8	3.9	2.9e-10	39.8	3.9	1.8	2	0	0	2	2	2	1	PGF-CTERM	motif
MG2	PF01835.19	gi|284162928|ref|YP_003401551.1|	-	0.0071	16.8	0.1	3.9	8.0	0.0	4.4	4	0	0	4	4	4	1	MG2	domain
MGC-24	PF05283.11	gi|284162928|ref|YP_003401551.1|	-	0.29	11.6	9.1	0.76	10.2	9.1	1.7	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24),	sialomucin
NAC	PF01849.18	gi|284162929|ref|YP_003401552.1|	-	1.2e-12	47.5	2.4	1.2e-12	47.5	2.4	2.0	1	1	1	2	2	2	1	NAC	domain
HOIP-UBA	PF16678.5	gi|284162929|ref|YP_003401552.1|	-	0.007	16.4	0.3	0.012	15.7	0.3	1.4	1	0	0	1	1	1	1	HOIP	UBA	domain	pair
UBA_4	PF14555.6	gi|284162929|ref|YP_003401552.1|	-	0.082	12.7	0.1	0.14	12.0	0.1	1.3	1	0	0	1	1	1	0	UBA-like	domain
Death	PF00531.22	gi|284162929|ref|YP_003401552.1|	-	0.1	12.8	0.5	12	6.1	0.0	2.3	2	1	0	2	2	2	0	Death	domain
UPF0154	PF03672.13	gi|284162929|ref|YP_003401552.1|	-	0.19	11.8	6.9	0.84	9.7	4.4	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
DUF4258	PF14076.6	gi|284162929|ref|YP_003401552.1|	-	1.2	9.6	4.0	18	5.8	0.2	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4258)
GCD14	PF08704.10	gi|284162930|ref|YP_003401553.1|	-	7.1e-15	55.4	0.0	9.6e-15	54.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.6	gi|284162930|ref|YP_003401553.1|	-	5.5e-10	39.2	0.0	7.2e-10	38.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|284162930|ref|YP_003401553.1|	-	9.8e-10	38.5	0.0	1.2e-09	38.3	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.6	gi|284162930|ref|YP_003401553.1|	-	4.8e-07	30.4	0.0	7.5e-07	29.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|284162930|ref|YP_003401553.1|	-	7.8e-07	28.8	0.0	2.2e-06	27.3	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.12	gi|284162930|ref|YP_003401553.1|	-	1.9e-05	25.2	0.0	3.4e-05	24.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|284162930|ref|YP_003401553.1|	-	0.00017	20.8	0.0	0.00025	20.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_3	PF01596.17	gi|284162930|ref|YP_003401553.1|	-	0.00085	18.5	0.4	0.0013	18.0	0.4	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_18	PF12847.7	gi|284162930|ref|YP_003401553.1|	-	0.00086	19.3	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|284162930|ref|YP_003401553.1|	-	0.0021	17.5	0.0	0.0028	17.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_12	PF08242.12	gi|284162930|ref|YP_003401553.1|	-	0.0046	17.7	0.0	0.008	16.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|284162930|ref|YP_003401553.1|	-	0.0079	15.8	0.0	0.013	15.1	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Met_10	PF02475.16	gi|284162930|ref|YP_003401553.1|	-	0.011	15.5	0.1	0.015	15.0	0.1	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_4	PF02390.17	gi|284162930|ref|YP_003401553.1|	-	0.028	13.9	0.0	0.056	12.9	0.0	1.5	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_23	PF13489.6	gi|284162930|ref|YP_003401553.1|	-	0.046	13.5	0.0	0.067	13.0	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DKNYY	PF13644.6	gi|284162930|ref|YP_003401553.1|	-	0.069	13.9	2.7	0.11	13.2	2.7	1.4	1	1	0	1	1	1	0	DKNYY	family
DOT1	PF08123.13	gi|284162930|ref|YP_003401553.1|	-	0.07	12.7	0.0	0.098	12.2	0.0	1.4	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
CMAS	PF02353.20	gi|284162930|ref|YP_003401553.1|	-	0.12	11.6	0.0	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
EamA	PF00892.20	gi|284162931|ref|YP_003401554.1|	-	1.4e-59	200.2	41.6	1.3e-30	106.4	17.3	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
Mg_trans_NIPA	PF05653.14	gi|284162931|ref|YP_003401554.1|	-	5.2e-06	25.8	18.4	1.6e-05	24.2	2.9	2.7	3	0	0	3	3	3	2	Magnesium	transporter	NIPA
TPT	PF03151.16	gi|284162931|ref|YP_003401554.1|	-	5.9e-06	25.8	18.5	0.002	17.5	5.7	2.0	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
SLC35F	PF06027.12	gi|284162931|ref|YP_003401554.1|	-	0.00013	21.6	6.6	0.00013	21.6	6.6	2.1	1	1	0	2	2	2	1	Solute	carrier	family	35
Colicin_im	PF03857.13	gi|284162931|ref|YP_003401554.1|	-	0.019	14.9	3.1	0.019	14.9	3.1	2.9	2	2	0	2	2	2	0	Colicin	immunity	protein
TMEM234	PF10639.9	gi|284162931|ref|YP_003401554.1|	-	0.022	14.8	11.1	0.84	9.7	1.2	2.6	2	0	0	2	2	2	0	Putative	transmembrane	family	234
Nuc_sug_transp	PF04142.15	gi|284162931|ref|YP_003401554.1|	-	0.032	13.4	9.7	0.44	9.7	2.0	2.2	2	0	0	2	2	2	0	Nucleotide-sugar	transporter
DMT_6	PF04342.12	gi|284162931|ref|YP_003401554.1|	-	1.7	8.9	20.4	3.4	7.9	0.5	3.8	3	2	1	4	4	4	0	Putative	member	of	DMT	superfamily	(DUF486)
HTH_24	PF13412.6	gi|284162932|ref|YP_003401555.1|	-	7.5e-09	35.0	0.1	4.1e-08	32.7	0.1	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_23	PF13384.6	gi|284162932|ref|YP_003401555.1|	-	5.4e-06	26.1	0.0	1.1e-05	25.0	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.7	gi|284162932|ref|YP_003401555.1|	-	5.5e-06	26.2	0.0	1e-05	25.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|284162932|ref|YP_003401555.1|	-	5.1e-05	23.2	0.0	0.00011	22.1	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_3	PF01381.22	gi|284162932|ref|YP_003401555.1|	-	0.00014	21.9	0.0	0.00029	20.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_5	PF01022.20	gi|284162932|ref|YP_003401555.1|	-	0.00077	19.3	0.0	0.0018	18.1	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_28	PF13518.6	gi|284162932|ref|YP_003401555.1|	-	0.001	19.2	0.0	0.002	18.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|284162932|ref|YP_003401555.1|	-	0.0011	18.7	0.1	0.003	17.3	0.1	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.22	gi|284162932|ref|YP_003401555.1|	-	0.0016	18.3	0.0	0.004	17.1	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_40	PF14493.6	gi|284162932|ref|YP_003401555.1|	-	0.0026	18.2	0.1	0.0049	17.3	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
KorB	PF08535.10	gi|284162932|ref|YP_003401555.1|	-	0.0041	17.1	0.1	0.018	15.1	0.0	2.0	2	0	0	2	2	2	1	KorB	domain
TrmB	PF01978.19	gi|284162932|ref|YP_003401555.1|	-	0.0044	16.9	0.1	0.051	13.5	0.0	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.6	gi|284162932|ref|YP_003401555.1|	-	0.0054	16.7	0.1	0.013	15.5	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
LexA_DNA_bind	PF01726.16	gi|284162932|ref|YP_003401555.1|	-	0.007	16.1	0.1	0.019	14.8	0.1	1.7	1	1	0	1	1	1	1	LexA	DNA	binding	domain
GerE	PF00196.19	gi|284162932|ref|YP_003401555.1|	-	0.009	15.5	0.0	0.017	14.7	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_29	PF13551.6	gi|284162932|ref|YP_003401555.1|	-	0.01	15.9	0.0	0.025	14.6	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_11	PF08279.12	gi|284162932|ref|YP_003401555.1|	-	0.015	15.2	0.0	0.033	14.1	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
KORA	PF16509.5	gi|284162932|ref|YP_003401555.1|	-	0.031	14.5	0.0	0.073	13.4	0.0	1.7	1	0	0	1	1	1	0	TrfB	plasmid	transcriptional	repressor
HTH_19	PF12844.7	gi|284162932|ref|YP_003401555.1|	-	0.034	14.2	0.1	0.08	13.0	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|284162932|ref|YP_003401555.1|	-	0.062	13.1	0.0	0.26	11.1	0.0	2.0	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|284162932|ref|YP_003401555.1|	-	0.073	13.3	0.0	0.21	11.8	0.0	1.7	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Sigma70_r4_2	PF08281.12	gi|284162932|ref|YP_003401555.1|	-	0.083	12.6	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
TetR_N	PF00440.23	gi|284162932|ref|YP_003401555.1|	-	0.085	12.7	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
HTH_Tnp_ISL3	PF13542.6	gi|284162932|ref|YP_003401555.1|	-	0.097	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Rrf2	PF02082.20	gi|284162932|ref|YP_003401555.1|	-	0.1	12.9	0.0	0.29	11.5	0.0	1.8	1	1	0	1	1	1	0	Transcriptional	regulator
RPA_C	PF08784.11	gi|284162932|ref|YP_003401555.1|	-	0.1	13.2	0.0	0.28	11.9	0.0	1.7	2	0	0	2	2	1	0	Replication	protein	A	C	terminal
Sigma70_r4	PF04545.16	gi|284162932|ref|YP_003401555.1|	-	0.12	11.9	0.0	0.24	10.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
Sdh_cyt	PF01127.22	gi|284162933|ref|YP_003401556.1|	-	3.1e-09	36.9	10.4	3.9e-09	36.6	10.4	1.2	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
TrbC	PF04956.13	gi|284162933|ref|YP_003401556.1|	-	0.022	15.0	2.7	0.029	14.6	2.7	1.2	1	0	0	1	1	1	0	TrbC/VIRB2	family
TatC	PF00902.18	gi|284162933|ref|YP_003401556.1|	-	0.8	9.5	10.4	1	9.1	10.4	1.1	1	0	0	1	1	1	0	Sec-independent	protein	translocase	protein	(TatC)
Sdh_cyt	PF01127.22	gi|284162934|ref|YP_003401557.1|	-	4.1e-12	46.2	6.5	5.1e-12	45.9	6.5	1.1	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Spore_permease	PF03845.13	gi|284162934|ref|YP_003401557.1|	-	0.01	14.7	11.1	0.012	14.4	11.1	1.1	1	0	0	1	1	1	0	Spore	germination	protein
COX15-CtaA	PF02628.15	gi|284162934|ref|YP_003401557.1|	-	0.58	9.2	5.6	0.75	8.8	5.6	1.1	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
Fer2_3	PF13085.6	gi|284162935|ref|YP_003401558.1|	-	6.9e-36	122.6	0.3	1.9e-35	121.2	0.0	1.8	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.6	gi|284162935|ref|YP_003401558.1|	-	3.7e-10	40.1	1.2	3.7e-10	40.1	1.2	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|284162935|ref|YP_003401558.1|	-	9.5e-09	35.2	2.3	9.5e-09	35.2	2.3	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|284162935|ref|YP_003401558.1|	-	5.4e-08	32.7	1.0	1.3e-06	28.3	0.0	2.3	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_16	PF13484.6	gi|284162935|ref|YP_003401558.1|	-	5.4e-08	33.7	2.8	5.4e-08	33.7	2.8	2.1	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|284162935|ref|YP_003401558.1|	-	1.1e-07	31.9	12.4	3.9e-06	26.9	3.1	2.7	2	2	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|284162935|ref|YP_003401558.1|	-	2.3e-07	31.3	13.6	1.4e-06	28.7	3.2	2.5	2	2	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|284162935|ref|YP_003401558.1|	-	8e-07	29.5	1.9	8e-07	29.5	1.9	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|284162935|ref|YP_003401558.1|	-	3.8e-05	23.3	2.0	3.8e-05	23.3	2.0	3.3	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer2_4	PF13510.6	gi|284162935|ref|YP_003401558.1|	-	0.00031	20.7	0.7	0.00052	20.0	0.0	1.6	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_2	PF12797.7	gi|284162935|ref|YP_003401558.1|	-	0.0019	18.2	1.8	0.0019	18.2	1.8	3.4	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|284162935|ref|YP_003401558.1|	-	0.003	17.6	1.0	0.003	17.6	1.0	3.4	4	0	0	4	4	3	1	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|284162935|ref|YP_003401558.1|	-	0.0038	17.6	2.0	0.0038	17.6	2.0	3.2	4	0	0	4	4	3	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|284162935|ref|YP_003401558.1|	-	0.014	15.5	6.6	0.039	14.1	0.4	2.8	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|284162935|ref|YP_003401558.1|	-	0.47	10.7	4.6	1.1	9.5	0.1	2.5	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|284162935|ref|YP_003401558.1|	-	0.91	10.6	21.8	0.35	11.9	4.2	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
FAD_binding_2	PF00890.24	gi|284162936|ref|YP_003401559.1|	-	6.8e-119	397.6	0.0	8.4e-119	397.4	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|284162936|ref|YP_003401559.1|	-	7e-43	145.7	0.2	1.1e-42	145.0	0.2	1.4	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|284162936|ref|YP_003401559.1|	-	6.9e-11	41.9	0.1	1.6e-05	24.3	0.1	2.8	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|284162936|ref|YP_003401559.1|	-	0.00026	20.2	4.1	0.085	11.9	1.2	2.5	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
DUF5517	PF17639.2	gi|284162936|ref|YP_003401559.1|	-	0.0008	19.7	1.1	0.0016	18.7	1.1	1.4	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5517)
DAO	PF01266.24	gi|284162936|ref|YP_003401559.1|	-	0.0019	17.8	1.0	0.042	13.4	1.0	2.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|284162936|ref|YP_003401559.1|	-	0.0032	16.9	0.6	0.47	9.7	0.7	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|284162936|ref|YP_003401559.1|	-	0.0038	16.5	1.8	0.041	13.1	0.2	2.8	3	0	0	3	3	3	1	Thi4	family
HI0933_like	PF03486.14	gi|284162936|ref|YP_003401559.1|	-	0.0054	15.5	3.0	0.035	12.8	0.1	3.1	4	0	0	4	4	4	1	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|284162936|ref|YP_003401559.1|	-	0.033	14.4	0.0	0.12	12.6	0.0	2.1	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|284162936|ref|YP_003401559.1|	-	0.056	12.5	0.3	0.086	11.9	0.3	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Peripla_BP_6	PF13458.6	gi|284162937|ref|YP_003401560.1|	-	1.9e-61	208.6	3.2	2.3e-61	208.4	3.2	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.28	gi|284162937|ref|YP_003401560.1|	-	6.9e-15	55.0	0.0	9.4e-15	54.6	0.0	1.1	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
Peripla_BP_5	PF13433.6	gi|284162937|ref|YP_003401560.1|	-	1.7e-14	53.6	0.8	2.5e-13	49.7	0.8	2.2	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
PGF-CTERM	PF18204.1	gi|284162937|ref|YP_003401560.1|	-	5.5e-07	29.3	0.2	5.5e-07	29.3	0.2	2.2	3	0	0	3	3	3	1	PGF-CTERM	motif
Peripla_BP_4	PF13407.6	gi|284162937|ref|YP_003401560.1|	-	1.2e-06	28.3	0.3	0.0017	18.0	0.0	2.4	2	0	0	2	2	2	2	Periplasmic	binding	protein	domain
ABC_sub_bind	PF04392.12	gi|284162937|ref|YP_003401560.1|	-	0.0004	19.7	0.1	0.00096	18.5	0.1	1.7	1	1	0	1	1	1	1	ABC	transporter	substrate	binding	protein
OmpH	PF03938.14	gi|284162937|ref|YP_003401560.1|	-	0.066	13.6	0.0	0.23	11.8	0.0	2.0	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
PBCV_basic_adap	PF08789.10	gi|284162937|ref|YP_003401560.1|	-	0.077	13.1	0.0	0.2	11.8	0.0	1.6	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
BPD_transp_2	PF02653.16	gi|284162938|ref|YP_003401561.1|	-	6.5e-40	137.0	48.1	7.4e-40	136.8	48.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.16	gi|284162939|ref|YP_003401562.1|	-	2.9e-32	111.9	28.0	2.9e-32	111.9	28.0	1.3	1	1	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
DUF456	PF04306.13	gi|284162939|ref|YP_003401562.1|	-	0.019	15.2	2.9	0.019	15.2	2.9	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF456)
ABC_tran	PF00005.27	gi|284162940|ref|YP_003401563.1|	-	1.8e-29	103.0	0.0	2.4e-29	102.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
BCA_ABC_TP_C	PF12399.8	gi|284162940|ref|YP_003401563.1|	-	5.5e-12	45.3	1.0	9.2e-12	44.6	0.1	1.9	2	0	0	2	2	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.6	gi|284162940|ref|YP_003401563.1|	-	4.4e-08	33.3	3.5	0.00024	21.0	0.2	2.2	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|284162940|ref|YP_003401563.1|	-	2.9e-05	24.7	0.2	5.4e-05	23.8	0.2	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|284162940|ref|YP_003401563.1|	-	6.2e-05	22.7	0.0	0.00011	21.9	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|284162940|ref|YP_003401563.1|	-	0.00071	19.1	0.4	0.089	12.2	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.6	gi|284162940|ref|YP_003401563.1|	-	0.0016	18.2	0.0	0.0042	16.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|284162940|ref|YP_003401563.1|	-	0.0018	17.5	0.2	0.35	10.0	0.0	2.1	2	0	0	2	2	2	2	NB-ARC	domain
AAA_22	PF13401.6	gi|284162940|ref|YP_003401563.1|	-	0.0033	17.7	1.4	1.5	9.1	0.1	2.4	2	1	0	2	2	2	2	AAA	domain
MMR_HSR1	PF01926.23	gi|284162940|ref|YP_003401563.1|	-	0.018	15.1	0.1	0.051	13.7	0.1	1.8	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_ATPase	PF09818.9	gi|284162940|ref|YP_003401563.1|	-	0.019	13.8	0.4	2.9	6.6	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
RsgA_GTPase	PF03193.16	gi|284162940|ref|YP_003401563.1|	-	0.02	14.8	0.0	0.044	13.7	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
IstB_IS21	PF01695.17	gi|284162940|ref|YP_003401563.1|	-	0.029	14.1	0.2	1.6	8.4	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|284162940|ref|YP_003401563.1|	-	0.035	14.0	0.3	0.46	10.4	0.1	2.1	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_27	PF13514.6	gi|284162940|ref|YP_003401563.1|	-	0.038	13.6	0.0	0.065	12.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|284162940|ref|YP_003401563.1|	-	0.06	13.3	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_15	PF13175.6	gi|284162940|ref|YP_003401563.1|	-	0.062	13.0	0.2	0.24	11.1	0.1	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_14	PF13173.6	gi|284162940|ref|YP_003401563.1|	-	0.063	13.3	0.2	0.86	9.6	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.15	gi|284162940|ref|YP_003401563.1|	-	0.064	13.2	1.6	1.1	9.1	0.2	2.5	1	1	1	2	2	2	0	NTPase
AAA	PF00004.29	gi|284162940|ref|YP_003401563.1|	-	0.13	12.7	0.7	2.9	8.3	0.1	2.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.6	gi|284162940|ref|YP_003401563.1|	-	0.22	10.1	0.0	0.23	10.1	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|284162941|ref|YP_003401564.1|	-	4.5e-31	108.2	0.0	9e-31	107.2	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|284162941|ref|YP_003401564.1|	-	6.9e-14	52.4	1.0	7.4e-06	26.0	0.1	2.1	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|284162941|ref|YP_003401564.1|	-	1.9e-05	24.3	0.1	3.8e-05	23.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|284162941|ref|YP_003401564.1|	-	2.1e-05	24.8	0.6	0.0002	21.7	0.6	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|284162941|ref|YP_003401564.1|	-	8.2e-05	22.1	1.0	0.0013	18.2	1.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|284162941|ref|YP_003401564.1|	-	0.00013	21.9	0.7	0.00049	19.9	0.1	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|284162941|ref|YP_003401564.1|	-	0.00021	21.9	1.9	0.00028	21.5	0.3	1.8	2	0	0	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.9	gi|284162941|ref|YP_003401564.1|	-	0.0025	16.7	1.4	0.081	11.7	0.2	2.7	3	0	0	3	3	3	1	Predicted	ATPase	of	the	ABC	class
NACHT	PF05729.12	gi|284162941|ref|YP_003401564.1|	-	0.0041	17.0	0.1	0.0087	16.0	0.1	1.5	1	0	0	1	1	1	1	NACHT	domain
cobW	PF02492.19	gi|284162941|ref|YP_003401564.1|	-	0.0085	15.7	0.1	0.015	14.9	0.1	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF3584	PF12128.8	gi|284162941|ref|YP_003401564.1|	-	0.026	12.1	0.2	0.034	11.7	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_30	PF13604.6	gi|284162941|ref|YP_003401564.1|	-	0.026	14.2	0.3	0.085	12.6	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.6	gi|284162941|ref|YP_003401564.1|	-	0.054	13.7	0.1	0.15	12.3	0.1	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.6	gi|284162941|ref|YP_003401564.1|	-	0.06	12.9	0.1	0.14	11.7	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|284162941|ref|YP_003401564.1|	-	0.069	13.5	0.6	0.2	12.0	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|284162941|ref|YP_003401564.1|	-	0.072	13.5	0.3	0.15	12.4	0.2	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|284162941|ref|YP_003401564.1|	-	0.076	13.2	0.1	0.12	12.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|284162941|ref|YP_003401564.1|	-	0.084	12.8	0.3	0.16	11.9	0.3	1.4	1	0	0	1	1	1	0	RsgA	GTPase
AAA	PF00004.29	gi|284162941|ref|YP_003401564.1|	-	0.088	13.2	0.1	0.27	11.7	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.21	gi|284162941|ref|YP_003401564.1|	-	0.09	12.2	0.1	0.18	11.2	0.1	1.5	1	1	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
malic	PF00390.19	gi|284162942|ref|YP_003401565.1|	-	4.3e-31	108.1	0.0	1.3e-28	100.1	0.0	2.4	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
Malic_M	PF03949.15	gi|284162942|ref|YP_003401565.1|	-	9e-25	87.4	0.6	5.9e-24	84.7	0.6	2.0	1	1	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
Acetyltransf_3	PF13302.7	gi|284162942|ref|YP_003401565.1|	-	0.1	13.3	0.0	0.4	11.4	0.0	2.0	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
TrmO	PF01980.16	gi|284162943|ref|YP_003401566.1|	-	6.8e-29	100.5	0.0	1e-28	99.9	0.0	1.2	1	0	0	1	1	1	1	tRNA-methyltransferase	O
dUTPase	PF00692.19	gi|284162943|ref|YP_003401566.1|	-	7.7e-09	35.3	0.0	1.2e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.11	gi|284162943|ref|YP_003401566.1|	-	0.035	12.9	0.0	0.049	12.4	0.0	1.2	1	0	0	1	1	1	0	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
CYTH	PF01928.21	gi|284162944|ref|YP_003401567.1|	-	1e-36	126.5	3.9	1.2e-36	126.3	3.9	1.0	1	0	0	1	1	1	1	CYTH	domain
PurS	PF02700.14	gi|284162944|ref|YP_003401567.1|	-	0.014	15.6	5.3	0.014	15.6	0.0	2.8	3	1	0	3	3	3	0	Phosphoribosylformylglycinamidine	(FGAM)	synthase
UTRA	PF07702.13	gi|284162944|ref|YP_003401567.1|	-	0.035	14.0	0.0	0.064	13.1	0.0	1.4	1	0	0	1	1	1	0	UTRA	domain
Radical_SAM	PF04055.21	gi|284162945|ref|YP_003401568.1|	-	1e-12	48.8	0.4	1.4e-10	41.8	0.1	2.5	2	0	0	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|284162945|ref|YP_003401568.1|	-	2.6e-07	31.0	0.0	5.3e-07	30.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|284162945|ref|YP_003401568.1|	-	6.1e-05	23.1	0.1	0.0002	21.5	0.1	1.9	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF669	PF05037.13	gi|284162945|ref|YP_003401568.1|	-	0.13	12.4	0.0	0.21	11.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF669)
Glyco_trans_2_3	PF13632.6	gi|284162946|ref|YP_003401569.1|	-	1.1e-13	51.6	0.3	1.5e-13	51.2	0.3	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.26	gi|284162946|ref|YP_003401569.1|	-	1.3e-09	38.1	0.1	1.9e-09	37.6	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|284162946|ref|YP_003401569.1|	-	2e-09	37.7	0.0	2.6e-09	37.3	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|284162946|ref|YP_003401569.1|	-	0.00033	20.2	0.0	0.00058	19.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
RE_MamI	PF09567.10	gi|284162946|ref|YP_003401569.1|	-	0.025	14.2	0.2	0.035	13.7	0.2	1.2	1	0	0	1	1	1	0	MamI	restriction	endonuclease
TruB_N	PF01509.18	gi|284162947|ref|YP_003401570.1|	-	1.5e-27	96.8	0.7	9.1e-24	84.5	0.7	3.3	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
TruB_C_2	PF16198.5	gi|284162947|ref|YP_003401570.1|	-	8.2e-27	93.1	0.1	1.6e-26	92.2	0.1	1.5	1	0	0	1	1	1	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
PUA	PF01472.20	gi|284162947|ref|YP_003401570.1|	-	6.1e-20	71.0	4.2	4.8e-19	68.1	1.7	2.5	2	0	0	2	2	2	1	PUA	domain
DKCLD	PF08068.12	gi|284162947|ref|YP_003401570.1|	-	1.1e-18	67.1	0.0	2.4e-18	65.9	0.0	1.6	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
UPF0113	PF03657.13	gi|284162947|ref|YP_003401570.1|	-	0.00065	19.9	0.3	0.0058	16.9	0.1	2.6	3	0	0	3	3	3	1	UPF0113	PUA	domain
GLTP	PF08718.11	gi|284162950|ref|YP_003401572.1|	-	0.0042	17.4	0.4	0.0053	17.1	0.4	1.2	1	0	0	1	1	1	1	Glycolipid	transfer	protein	(GLTP)
MIF4G_like_2	PF09090.11	gi|284162950|ref|YP_003401572.1|	-	0.18	11.2	5.1	0.2	11.1	5.1	1.1	1	0	0	1	1	1	0	MIF4G	like
GvpL_GvpF	PF06386.11	gi|284162950|ref|YP_003401572.1|	-	0.35	10.8	6.1	0.43	10.5	6.1	1.1	1	0	0	1	1	1	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
CemA	PF03040.14	gi|284162950|ref|YP_003401572.1|	-	0.37	10.7	4.2	0.55	10.1	4.2	1.2	1	0	0	1	1	1	0	CemA	family
HSP70	PF00012.20	gi|284162950|ref|YP_003401572.1|	-	1.3	7.1	11.2	1.5	7.0	11.2	1.0	1	0	0	1	1	1	0	Hsp70	protein
Rota_VP2	PF05087.12	gi|284162950|ref|YP_003401572.1|	-	1.9	6.5	6.5	2.2	6.3	6.5	1.0	1	0	0	1	1	1	0	Rotavirus	VP2	protein
ADSL_C	PF10397.9	gi|284162950|ref|YP_003401572.1|	-	2.4	8.8	6.4	1	9.9	4.0	1.7	1	1	1	2	2	2	0	Adenylosuccinate	lyase	C-terminus
ProSAAS	PF07259.12	gi|284162950|ref|YP_003401572.1|	-	9.8	6.1	8.4	1	9.3	3.8	1.6	1	1	1	2	2	2	0	ProSAAS	precursor
Peptidase_C48	PF02902.19	gi|284162951|ref|YP_003401573.1|	-	0.27	11.1	1.6	0.55	10.0	0.2	2.0	2	0	0	2	2	2	0	Ulp1	protease	family,	C-terminal	catalytic	domain
DUF573	PF04504.14	gi|284162951|ref|YP_003401573.1|	-	1.4	9.6	4.4	3.8	8.2	0.4	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function,	DUF573
RHH_7	PF16777.5	gi|284162952|ref|YP_003401574.1|	-	0.049	14.0	0.0	0.075	13.4	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator,	RHH-like,	CopG
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Archaeoglobus_profundus_DSM_5631_uid43493/NC_013741-NC_013742.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Archaeoglobus_profundus_DSM_5631_uid43493/NC_013741-NC_013742.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Archaeoglobus_profundus_DSM_5631_uid43493/NC_013741-NC_013742.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Archaeoglobus_profundus_DSM_5631_uid43493/NC_013741-NC_013742.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 12:13:37 2019
# [ok]