#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|289595679|ref|YP_003482375.1|	-	6.8e-23	80.1	1.1	1.6e-21	75.7	0.0	2.7	3	0	0	3	3	2	1	CDC6,	C	terminal
AAA	PF00004.24	gi|289595679|ref|YP_003482375.1|	-	4.8e-11	42.9	0.2	3.4e-10	40.2	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|289595679|ref|YP_003482375.1|	-	9.3e-11	42.0	0.3	1.7e-09	37.9	0.0	2.7	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289595679|ref|YP_003482375.1|	-	1.1e-08	35.3	0.0	2.4e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|289595679|ref|YP_003482375.1|	-	2.7e-08	33.8	0.3	4.9e-08	32.9	0.2	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
Sigma54_activat	PF00158.21	gi|289595679|ref|YP_003482375.1|	-	9.5e-05	21.9	0.3	0.00099	18.6	0.0	2.5	3	0	0	3	3	3	1	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|289595679|ref|YP_003482375.1|	-	0.00064	18.7	0.0	0.001	18.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
DEAD	PF00270.24	gi|289595679|ref|YP_003482375.1|	-	0.00068	19.1	0.1	0.95	8.9	0.0	2.4	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
NACHT	PF05729.7	gi|289595679|ref|YP_003482375.1|	-	0.0012	18.4	0.0	0.0028	17.3	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_17	PF13207.1	gi|289595679|ref|YP_003482375.1|	-	0.0062	17.3	0.7	0.02	15.7	0.4	2.1	1	1	0	1	1	1	1	AAA	domain
Miro	PF08477.8	gi|289595679|ref|YP_003482375.1|	-	0.0085	16.5	0.0	0.019	15.4	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
KAP_NTPase	PF07693.9	gi|289595679|ref|YP_003482375.1|	-	0.014	14.4	0.1	0.21	10.5	0.1	2.0	1	1	0	1	1	1	0	KAP	family	P-loop	domain
AAA_25	PF13481.1	gi|289595679|ref|YP_003482375.1|	-	0.024	14.0	0.6	0.18	11.1	0.4	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|289595679|ref|YP_003482375.1|	-	0.029	14.6	0.1	0.091	13.0	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|289595679|ref|YP_003482375.1|	-	0.029	14.2	0.2	0.076	12.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Bac_DnaA	PF00308.13	gi|289595679|ref|YP_003482375.1|	-	0.032	13.8	2.2	0.27	10.8	0.0	2.2	2	0	0	2	2	2	0	Bacterial	dnaA	protein
T2SE	PF00437.15	gi|289595679|ref|YP_003482375.1|	-	0.032	13.1	0.0	0.061	12.2	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|289595679|ref|YP_003482375.1|	-	0.035	13.5	0.0	0.068	12.6	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_2	PF07724.9	gi|289595679|ref|YP_003482375.1|	-	0.04	13.8	0.1	0.22	11.4	0.1	2.0	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
DUF87	PF01935.12	gi|289595679|ref|YP_003482375.1|	-	0.047	13.5	0.1	0.11	12.2	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_24	PF13479.1	gi|289595679|ref|YP_003482375.1|	-	0.054	13.0	0.1	0.13	11.8	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|289595679|ref|YP_003482375.1|	-	0.057	12.8	0.0	0.14	11.6	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Sigma54_activ_2	PF14532.1	gi|289595679|ref|YP_003482375.1|	-	0.081	12.9	0.0	0.24	11.4	0.0	1.7	2	0	0	2	2	1	0	Sigma-54	interaction	domain
AAA_5	PF07728.9	gi|289595679|ref|YP_003482375.1|	-	0.085	12.5	0.3	0.71	9.6	0.0	2.4	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.4	gi|289595679|ref|YP_003482375.1|	-	0.1	11.5	0.0	0.16	10.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|289595679|ref|YP_003482375.1|	-	0.1	12.7	0.0	0.25	11.5	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_19	PF13245.1	gi|289595679|ref|YP_003482375.1|	-	0.15	11.8	0.0	0.31	10.8	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
MobB	PF03205.9	gi|289595679|ref|YP_003482375.1|	-	0.17	11.5	0.8	0.33	10.6	0.2	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Peptidase_S24	PF00717.18	gi|289595680|ref|YP_003482376.1|	-	0.023	14.3	0.2	0.071	12.7	0.1	2.0	1	1	0	1	1	1	0	Peptidase	S24-like
eIF-5a	PF01287.15	gi|289595681|ref|YP_003482377.1|	-	8.1e-19	67.3	0.2	1.4e-18	66.5	0.1	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|289595681|ref|YP_003482377.1|	-	0.00071	19.3	0.0	0.0011	18.7	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	KOW-like	domain
EFP	PF01132.15	gi|289595681|ref|YP_003482377.1|	-	0.0023	17.5	0.0	0.0039	16.8	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	OB	domain
KOW	PF00467.24	gi|289595681|ref|YP_003482377.1|	-	0.067	12.9	0.2	0.21	11.3	0.1	1.9	1	0	0	1	1	1	0	KOW	motif
Arginase	PF00491.16	gi|289595682|ref|YP_003482378.1|	-	1.5e-75	254.1	0.0	1.8e-75	253.8	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DUF87	PF01935.12	gi|289595682|ref|YP_003482378.1|	-	0.02	14.7	0.0	0.034	13.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
Cas_Cas1	PF01867.11	gi|289595682|ref|YP_003482378.1|	-	0.1	11.6	0.0	0.18	10.8	0.0	1.3	1	0	0	1	1	1	0	CRISPR	associated	protein	Cas1
T2SE	PF00437.15	gi|289595684|ref|YP_003482380.1|	-	1.2e-42	145.7	0.0	2e-42	144.9	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|289595684|ref|YP_003482380.1|	-	0.03	14.6	0.0	0.095	13.0	0.0	1.9	1	0	0	1	1	1	0	ABC	transporter
T2SF	PF00482.18	gi|289595685|ref|YP_003482381.1|	-	6.8e-13	48.6	0.1	6.8e-13	48.6	0.1	4.1	3	1	1	4	4	4	1	Type	II	secretion	system	(T2SS),	protein	F
DUF2207	PF09972.4	gi|289595685|ref|YP_003482381.1|	-	0.0042	15.7	10.7	0.058	11.9	1.0	2.1	2	0	0	2	2	2	2	Predicted	membrane	protein	(DUF2207)
ABC2_membrane_4	PF12730.2	gi|289595685|ref|YP_003482381.1|	-	0.0066	15.6	3.1	0.0066	15.6	2.2	2.2	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
FA_desaturase	PF00487.19	gi|289595685|ref|YP_003482381.1|	-	0.015	14.7	0.5	1.9	7.8	0.0	2.1	2	0	0	2	2	2	0	Fatty	acid	desaturase
DUF4064	PF13273.1	gi|289595685|ref|YP_003482381.1|	-	0.021	14.9	18.7	0.027	14.5	2.3	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF4064)
DUF872	PF05915.7	gi|289595685|ref|YP_003482381.1|	-	0.085	12.7	8.5	0.084	12.7	1.0	2.2	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF898	PF05987.8	gi|289595685|ref|YP_003482381.1|	-	0.31	9.8	15.0	0.36	9.6	1.8	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF898)
DUF3796	PF12676.2	gi|289595685|ref|YP_003482381.1|	-	1.9	8.7	18.2	0.21	11.8	5.1	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3796)
ABC2_membrane_3	PF12698.2	gi|289595685|ref|YP_003482381.1|	-	2.4	7.1	20.0	1.4	7.8	6.7	2.2	2	0	0	2	2	2	0	ABC-2	family	transporter	protein
Tetraspannin	PF00335.15	gi|289595685|ref|YP_003482381.1|	-	2.5	7.3	12.2	3.8	6.7	0.7	2.3	2	0	0	2	2	2	0	Tetraspanin	family
Wzy_C	PF04932.10	gi|289595685|ref|YP_003482381.1|	-	6.6	6.4	14.7	1	9.1	0.7	2.2	2	0	0	2	2	2	0	O-Antigen	ligase
T2SF	PF00482.18	gi|289595686|ref|YP_003482382.1|	-	3.7e-17	62.3	0.4	3.7e-17	62.3	0.3	2.3	2	0	0	2	2	2	1	Type	II	secretion	system	(T2SS),	protein	F
DUF2368	PF10166.4	gi|289595686|ref|YP_003482382.1|	-	0.43	10.2	2.2	0.44	10.1	0.4	2.0	2	1	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2368)
DUF2207	PF09972.4	gi|289595686|ref|YP_003482382.1|	-	0.58	8.6	6.6	0.48	8.9	0.4	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
T2SE	PF00437.15	gi|289595687|ref|YP_003482383.1|	-	1.2e-46	158.8	0.0	2.1e-46	158.0	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|289595687|ref|YP_003482383.1|	-	0.0033	16.9	0.0	0.012	15.0	0.0	1.9	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_29	PF13555.1	gi|289595687|ref|YP_003482383.1|	-	0.021	14.3	0.0	0.043	13.3	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
3H	PF02829.9	gi|289595687|ref|YP_003482383.1|	-	0.03	14.3	0.2	0.27	11.2	0.0	2.5	2	0	0	2	2	2	0	3H	domain
AAA_23	PF13476.1	gi|289595687|ref|YP_003482383.1|	-	0.044	14.1	5.4	0.22	11.8	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|289595687|ref|YP_003482383.1|	-	0.063	14.1	0.1	0.98	10.2	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|289595687|ref|YP_003482383.1|	-	0.24	11.7	5.1	1.8	8.9	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
zf-ribbon_3	PF13248.1	gi|289595688|ref|YP_003482384.1|	-	1.6e-17	62.0	22.7	9.6e-06	24.6	1.8	3.4	3	0	0	3	3	3	3	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289595688|ref|YP_003482384.1|	-	1e-13	50.3	20.6	0.0001	21.6	0.7	3.5	3	0	0	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.2	gi|289595688|ref|YP_003482384.1|	-	1.5e-13	50.2	18.7	7.5e-09	35.2	6.7	2.3	2	0	0	2	2	2	2	Double	zinc	ribbon
CARDB	PF07705.6	gi|289595688|ref|YP_003482384.1|	-	4.1e-10	39.5	40.7	6.7e-06	26.0	0.6	6.7	7	1	0	7	7	7	3	CARDB
UPF0547	PF10571.4	gi|289595688|ref|YP_003482384.1|	-	1.6e-08	34.0	28.0	0.00013	21.5	3.0	3.3	3	0	0	3	3	3	3	Uncharacterised	protein	family	UPF0547
MaoC_dehydrat_N	PF13452.1	gi|289595688|ref|YP_003482384.1|	-	0.017	14.8	0.0	0.054	13.2	0.0	1.8	1	0	0	1	1	1	0	N-terminal	half	of	MaoC	dehydratase
Prok-RING_1	PF14446.1	gi|289595688|ref|YP_003482384.1|	-	2.4	7.9	21.1	0.061	13.0	1.0	3.9	2	2	2	4	4	4	0	Prokaryotic	RING	finger	family	1
FdhE	PF04216.7	gi|289595688|ref|YP_003482384.1|	-	3.7	7.1	7.6	12	5.5	0.2	3.3	2	1	2	4	4	4	0	Protein	involved	in	formate	dehydrogenase	formation
Rad50_zn_hook	PF04423.9	gi|289595688|ref|YP_003482384.1|	-	9.1	5.8	22.2	14	5.2	0.4	5.2	2	2	3	5	5	5	0	Rad50	zinc	hook	motif
Met_10	PF02475.11	gi|289595689|ref|YP_003482385.1|	-	3.9e-55	186.5	0.1	5.3e-55	186.1	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|289595689|ref|YP_003482385.1|	-	0.00061	19.8	0.0	0.0011	19.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289595689|ref|YP_003482385.1|	-	0.00063	20.3	0.0	0.0015	19.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|289595689|ref|YP_003482385.1|	-	0.0015	17.9	0.0	0.0021	17.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|289595689|ref|YP_003482385.1|	-	0.0073	15.8	0.1	0.031	13.8	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.6	gi|289595689|ref|YP_003482385.1|	-	0.012	14.2	0.0	0.023	13.3	0.0	1.4	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_4	PF02390.12	gi|289595689|ref|YP_003482385.1|	-	0.019	14.0	0.0	0.037	13.0	0.0	1.5	1	0	0	1	1	1	0	Putative	methyltransferase
Cons_hypoth95	PF03602.10	gi|289595689|ref|YP_003482385.1|	-	0.019	14.3	0.0	0.03	13.7	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
PrmA	PF06325.8	gi|289595689|ref|YP_003482385.1|	-	0.049	12.7	0.0	0.1	11.6	0.0	1.6	1	1	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
DNA_methylase	PF00145.12	gi|289595689|ref|YP_003482385.1|	-	0.071	12.2	0.0	0.14	11.2	0.0	1.5	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
PHO4	PF01384.15	gi|289595690|ref|YP_003482386.1|	-	0.71	8.4	4.8	0.21	10.1	0.2	2.1	2	1	0	2	2	2	0	Phosphate	transporter	family
Transglut_core	PF01841.14	gi|289595691|ref|YP_003482387.1|	-	2.5e-15	56.6	0.0	5e-15	55.7	0.0	1.5	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Transglut_core3	PF13471.1	gi|289595691|ref|YP_003482387.1|	-	0.0073	16.0	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
DUF2407	PF10302.4	gi|289595691|ref|YP_003482387.1|	-	0.023	14.8	0.1	0.038	14.1	0.1	1.4	1	0	0	1	1	1	0	DUF2407	ubiquitin-like	domain
Rad60-SLD_2	PF13881.1	gi|289595691|ref|YP_003482387.1|	-	0.15	11.9	0.2	0.28	11.1	0.1	1.4	1	0	0	1	1	1	0	Ubiquitin-2	like	Rad60	SUMO-like
DUF1030	PF06270.6	gi|289595692|ref|YP_003482388.1|	-	0.061	12.8	0.4	0.12	11.8	0.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1030)
DrrA_P4M	PF14860.1	gi|289595693|ref|YP_003482389.1|	-	0.0049	16.5	0.3	0.0056	16.4	0.2	1.1	1	0	0	1	1	1	1	DrrA	phosphatidylinositol	4-phosphate	binding	domain
TFIIE_alpha	PF02002.12	gi|289595693|ref|YP_003482389.1|	-	0.006	16.0	0.9	0.0079	15.6	0.6	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
DUF713	PF05218.9	gi|289595693|ref|YP_003482389.1|	-	0.017	14.8	1.2	0.017	14.8	0.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF713)
Bac_DNA_binding	PF00216.16	gi|289595693|ref|YP_003482389.1|	-	0.04	13.9	1.2	0.045	13.7	0.8	1.1	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
PqqD	PF05402.7	gi|289595693|ref|YP_003482389.1|	-	0.06	13.3	0.0	0.8	9.7	0.0	2.0	1	1	1	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF1296	PF06972.6	gi|289595693|ref|YP_003482389.1|	-	0.073	13.0	0.1	0.092	12.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1296)
DDE_Tnp_4	PF13359.1	gi|289595693|ref|YP_003482389.1|	-	0.1	12.2	0.1	0.1	12.2	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
Chlamy_scaf	PF09675.5	gi|289595693|ref|YP_003482389.1|	-	0.11	12.4	0.2	0.12	12.3	0.1	1.1	1	0	0	1	1	1	0	Chlamydia-phage	Chp2	scaffold	(Chlamy_scaf)
SynMuv_product	PF06047.6	gi|289595693|ref|YP_003482389.1|	-	0.16	11.6	0.6	0.25	11.1	0.4	1.3	1	0	0	1	1	1	0	Ras-induced	vulval	development	antagonist
DUF4064	PF13273.1	gi|289595694|ref|YP_003482390.1|	-	0.0024	17.9	4.1	0.0024	17.9	2.8	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4064)
Chloroplast_duf	PF14476.1	gi|289595694|ref|YP_003482390.1|	-	0.01	14.6	0.1	0.013	14.3	0.1	1.1	1	0	0	1	1	1	0	Petal	formation-expressed
DUF3902	PF13042.1	gi|289595694|ref|YP_003482390.1|	-	0.017	14.4	9.0	0.022	14.0	6.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3902)
DUF4231	PF14015.1	gi|289595694|ref|YP_003482390.1|	-	0.083	12.8	4.3	0.57	10.1	1.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DUF973	PF06157.6	gi|289595694|ref|YP_003482390.1|	-	0.084	11.8	7.5	0.11	11.4	5.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
COX14	PF14880.1	gi|289595694|ref|YP_003482390.1|	-	0.14	11.7	0.5	0.14	11.7	0.3	1.8	2	0	0	2	2	2	0	Cytochrome	oxidase	c	assembly
FtsH_ext	PF06480.10	gi|289595694|ref|YP_003482390.1|	-	0.28	11.3	0.0	0.28	11.3	0.0	2.6	2	1	1	3	3	3	0	FtsH	Extracellular
Ninjurin	PF04923.7	gi|289595694|ref|YP_003482390.1|	-	0.32	10.7	2.3	0.3	10.8	0.2	1.8	2	0	0	2	2	2	0	Ninjurin
Colicin_V	PF02674.11	gi|289595694|ref|YP_003482390.1|	-	0.99	9.2	12.2	1.6	8.5	8.3	1.5	1	1	0	1	1	1	0	Colicin	V	production	protein
Vma12	PF11712.3	gi|289595694|ref|YP_003482390.1|	-	1.4	8.6	5.2	8.6	6.0	1.0	2.2	2	0	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
FtsX	PF02687.16	gi|289595694|ref|YP_003482390.1|	-	1.9	8.2	13.4	8	6.2	9.3	1.8	1	1	0	1	1	1	0	FtsX-like	permease	family
LMBR1	PF04791.11	gi|289595694|ref|YP_003482390.1|	-	2.8	6.3	7.5	0.89	8.0	3.4	1.5	1	1	0	1	1	1	0	LMBR1-like	membrane	protein
Cellulose_synt	PF03552.9	gi|289595694|ref|YP_003482390.1|	-	3.6	5.7	5.9	4.2	5.5	4.1	1.1	1	0	0	1	1	1	0	Cellulose	synthase
Elf1	PF05129.8	gi|289595695|ref|YP_003482391.1|	-	0.00058	19.4	0.9	0.0014	18.2	0.7	1.7	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
zf-ZPR1	PF03367.8	gi|289595695|ref|YP_003482391.1|	-	0.0044	16.2	1.3	0.007	15.5	0.9	1.5	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
zf-ribbon_3	PF13248.1	gi|289595695|ref|YP_003482391.1|	-	0.0049	16.0	1.5	2.2	7.5	0.2	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|289595695|ref|YP_003482391.1|	-	0.016	14.8	1.6	0.18	11.5	1.1	2.4	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF2387	PF09526.5	gi|289595695|ref|YP_003482391.1|	-	0.022	14.6	0.4	0.055	13.4	0.2	1.7	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
TrkA_C	PF02080.16	gi|289595695|ref|YP_003482391.1|	-	0.027	14.0	0.7	3.4	7.3	0.0	2.4	1	1	1	2	2	2	0	TrkA-C	domain
DUF951	PF06107.6	gi|289595695|ref|YP_003482391.1|	-	0.027	13.9	2.7	8.5	5.9	0.0	3.5	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF951)
zf-NADH-PPase	PF09297.6	gi|289595695|ref|YP_003482391.1|	-	0.03	13.8	0.2	3.9	7.0	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-DNA_Pol	PF08996.5	gi|289595695|ref|YP_003482391.1|	-	0.031	13.6	0.7	0.053	12.8	0.5	1.4	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
UPF0547	PF10571.4	gi|289595695|ref|YP_003482391.1|	-	0.037	13.7	0.4	0.24	11.1	0.3	2.1	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_5	PF13719.1	gi|289595695|ref|YP_003482391.1|	-	0.041	13.4	2.2	0.47	10.0	1.5	2.4	1	1	0	1	1	1	0	zinc-ribbon	domain
CALCOCO1	PF07888.6	gi|289595695|ref|YP_003482391.1|	-	0.057	11.7	0.2	0.066	11.5	0.1	1.1	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
zinc_ribbon_2	PF13240.1	gi|289595695|ref|YP_003482391.1|	-	0.12	11.8	5.0	3.3	7.3	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
FdhE	PF04216.7	gi|289595695|ref|YP_003482391.1|	-	0.19	11.4	1.0	0.27	10.9	0.7	1.2	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
Zn-ribbon_8	PF09723.5	gi|289595695|ref|YP_003482391.1|	-	0.19	11.6	4.1	13	5.8	1.1	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|289595695|ref|YP_003482391.1|	-	0.32	10.8	2.0	1.1	9.0	1.4	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
Sgf11	PF08209.6	gi|289595695|ref|YP_003482391.1|	-	0.36	10.1	3.1	0.99	8.7	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
BNR_2	PF13088.1	gi|289595696|ref|YP_003482392.1|	-	2.4e-11	43.4	7.5	1.2e-10	41.1	5.2	2.0	1	1	0	1	1	1	1	BNR	repeat-like	domain
TPR_11	PF13414.1	gi|289595696|ref|YP_003482392.1|	-	4e-07	29.5	0.0	9.8e-07	28.3	0.0	1.6	1	0	0	1	1	1	1	TPR	repeat
TPR_2	PF07719.12	gi|289595696|ref|YP_003482392.1|	-	0.00079	19.1	0.2	0.011	15.5	0.0	2.5	2	0	0	2	2	2	1	Tetratricopeptide	repeat
BNR	PF02012.15	gi|289595696|ref|YP_003482392.1|	-	0.0012	18.3	20.6	0.41	10.6	0.1	5.3	4	0	0	4	4	4	2	BNR/Asp-box	repeat
BNR_assoc_N	PF14873.1	gi|289595696|ref|YP_003482392.1|	-	0.0014	18.4	0.8	0.0034	17.1	0.5	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	BNR-repeat	neuraminidase
TPR_16	PF13432.1	gi|289595696|ref|YP_003482392.1|	-	0.0028	18.2	0.0	0.0057	17.2	0.0	1.4	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289595696|ref|YP_003482392.1|	-	0.025	14.3	0.5	0.11	12.3	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|289595696|ref|YP_003482392.1|	-	0.026	14.4	0.0	0.044	13.7	0.0	1.3	1	0	0	1	1	1	0	Tetratricopeptide	repeat
HHH_5	PF14520.1	gi|289595696|ref|YP_003482392.1|	-	0.045	13.9	0.0	0.096	12.8	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
DUF756	PF05506.7	gi|289595696|ref|YP_003482392.1|	-	0.099	13.1	0.3	34	5.0	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF756)
Alba	PF01918.16	gi|289595697|ref|YP_003482393.1|	-	2.7e-18	65.3	0.8	3.7e-18	64.8	0.6	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|289595697|ref|YP_003482393.1|	-	0.015	14.9	0.3	0.024	14.3	0.1	1.6	1	1	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
MMPL	PF03176.10	gi|289595698|ref|YP_003482394.1|	-	1.6e-52	178.3	4.9	1.6e-29	102.7	2.5	2.4	2	0	0	2	2	2	2	MMPL	family
Sterol-sensing	PF12349.3	gi|289595698|ref|YP_003482394.1|	-	3.3e-23	81.8	4.4	3e-11	42.9	0.1	2.8	2	0	0	2	2	2	2	Sterol-sensing	domain	of	SREBP	cleavage-activation
Patched	PF02460.13	gi|289595698|ref|YP_003482394.1|	-	7.9e-21	73.7	39.3	1.6e-20	72.6	24.3	3.2	2	1	0	2	2	2	1	Patched	family
ACR_tran	PF00873.14	gi|289595698|ref|YP_003482394.1|	-	1.3e-06	26.1	26.2	3.6e-05	21.4	5.1	2.5	3	0	0	3	3	3	2	AcrB/AcrD/AcrF	family
DUF4131	PF13567.1	gi|289595698|ref|YP_003482394.1|	-	0.0055	16.1	6.5	2.3	7.5	0.3	4.3	4	0	0	4	4	4	2	Domain	of	unknown	function	(DUF4131)
HTH_24	PF13412.1	gi|289595699|ref|YP_003482395.1|	-	1.8e-10	40.0	0.0	1.9e-06	27.1	0.0	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289595699|ref|YP_003482395.1|	-	3.8e-09	36.1	0.0	9.4e-05	22.0	0.0	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|289595699|ref|YP_003482395.1|	-	1.4e-07	31.1	0.0	0.00033	20.3	0.0	2.4	2	0	0	2	2	2	2	MarR	family
MarR_2	PF12802.2	gi|289595699|ref|YP_003482395.1|	-	4.3e-07	29.5	0.0	0.0011	18.5	0.0	2.3	2	0	0	2	2	2	2	MarR	family
Fe_dep_repress	PF01325.14	gi|289595699|ref|YP_003482395.1|	-	3.3e-05	23.7	0.0	0.029	14.3	0.0	2.5	2	0	0	2	2	2	2	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_AsnC-type	PF13404.1	gi|289595699|ref|YP_003482395.1|	-	9e-05	21.9	0.0	0.015	14.8	0.0	2.4	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_27	PF13463.1	gi|289595699|ref|YP_003482395.1|	-	0.00098	19.3	0.0	2	8.8	0.0	2.3	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
HTH_38	PF13936.1	gi|289595699|ref|YP_003482395.1|	-	0.0022	17.4	0.0	2.9	7.5	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|289595699|ref|YP_003482395.1|	-	0.0039	17.2	0.1	2.2	8.5	0.0	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|289595699|ref|YP_003482395.1|	-	0.0055	16.7	0.1	1.5	8.9	0.1	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_28	PF13518.1	gi|289595699|ref|YP_003482395.1|	-	0.011	15.7	0.0	1.6	8.8	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289595699|ref|YP_003482395.1|	-	0.018	14.7	0.0	0.058	13.0	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|289595699|ref|YP_003482395.1|	-	0.045	13.3	0.0	0.16	11.6	0.0	1.9	1	0	0	1	1	1	0	HTH	domain
HTH_Tnp_IS630	PF01710.11	gi|289595699|ref|YP_003482395.1|	-	0.047	13.3	1.6	3.2	7.4	0.4	2.5	2	0	0	2	2	2	0	Transposase
HTH_29	PF13551.1	gi|289595699|ref|YP_003482395.1|	-	0.052	13.6	0.0	2.8	8.1	0.0	2.3	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_32	PF13565.1	gi|289595699|ref|YP_003482395.1|	-	0.06	14.1	0.0	0.19	12.5	0.0	1.8	2	0	0	2	2	1	0	Homeodomain-like	domain
HTH_23	PF13384.1	gi|289595699|ref|YP_003482395.1|	-	0.079	12.6	0.0	18	5.1	0.0	2.3	2	0	0	2	2	2	0	Homeodomain-like	domain
Snapin_Pallidin	PF14712.1	gi|289595699|ref|YP_003482395.1|	-	8.4	6.7	7.3	1.2	9.5	1.5	2.2	3	0	0	3	3	2	0	Snapin/Pallidin
Peptidase_M20	PF01546.23	gi|289595700|ref|YP_003482396.1|	-	1.1e-29	103.2	0.2	1.5e-29	102.8	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|289595700|ref|YP_003482396.1|	-	2.2e-13	49.9	0.0	4.9e-13	48.7	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
NdhM	PF10664.4	gi|289595701|ref|YP_003482397.1|	-	0.013	15.3	0.6	0.033	14.1	0.3	1.8	1	1	0	1	1	1	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
Hint_2	PF13403.1	gi|289595701|ref|YP_003482397.1|	-	0.079	12.8	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	Hint	domain
Pox_F11	PF04943.7	gi|289595701|ref|YP_003482397.1|	-	0.31	9.8	10.5	0.69	8.7	7.3	1.5	1	1	0	1	1	1	0	Poxvirus	F11	protein
Cas_DxTHG	PF09455.5	gi|289595701|ref|YP_003482397.1|	-	0.34	9.9	11.0	0.41	9.7	7.6	1.2	1	0	0	1	1	1	0	CRISPR-associated	(Cas)	DxTHG	family
Ribosomal_S19e	PF01090.14	gi|289595702|ref|YP_003482398.1|	-	4.4e-55	184.9	0.4	5.1e-55	184.7	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_45	PF14947.1	gi|289595702|ref|YP_003482398.1|	-	0.0011	18.7	0.0	0.0018	18.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
RuvB_C	PF05491.8	gi|289595702|ref|YP_003482398.1|	-	0.0021	17.6	0.0	0.18	11.4	0.0	2.6	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_12	PF08461.5	gi|289595702|ref|YP_003482398.1|	-	0.013	15.2	0.2	0.033	13.9	0.2	1.8	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
GntR	PF00392.16	gi|289595702|ref|YP_003482398.1|	-	0.014	14.7	0.0	0.042	13.2	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF1213	PF06740.7	gi|289595702|ref|YP_003482398.1|	-	0.089	12.9	0.0	0.28	11.3	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1213)
dsDNA_bind	PF01984.15	gi|289595703|ref|YP_003482399.1|	-	5.1e-30	103.6	17.7	5.9e-30	103.4	12.3	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
DLD	PF14878.1	gi|289595703|ref|YP_003482399.1|	-	0.076	13.1	1.9	0.089	12.9	1.2	1.5	1	1	0	1	1	1	0	Death-like	domain	of	SPT6
Adeno_E4_34	PF04528.8	gi|289595703|ref|YP_003482399.1|	-	0.9	9.1	4.7	0.52	9.9	1.7	1.6	1	1	1	2	2	2	0	Adenovirus	early	E4	34	kDa	protein	conserved	region
Ribosomal_L39	PF00832.15	gi|289595704|ref|YP_003482400.1|	-	2.6e-19	68.4	15.1	3.2e-19	68.1	10.5	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
Sof1	PF04158.9	gi|289595704|ref|YP_003482400.1|	-	1	9.4	4.5	1.1	9.3	3.1	1.2	1	0	0	1	1	1	0	Sof1-like	domain
Ribosomal_L31e	PF01198.14	gi|289595705|ref|YP_003482401.1|	-	2.2e-26	91.3	2.6	2.5e-26	91.1	1.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L31e
eIF-6	PF01912.13	gi|289595706|ref|YP_003482402.1|	-	6.9e-64	214.6	4.9	6.9e-64	214.6	3.4	1.4	1	1	0	1	1	1	1	eIF-6	family
Lactamase_B_3	PF13483.1	gi|289595707|ref|YP_003482403.1|	-	5.1e-48	162.8	1.2	6.1e-48	162.6	0.8	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|289595707|ref|YP_003482403.1|	-	2.8e-13	49.8	4.7	1.1e-08	34.8	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289595707|ref|YP_003482403.1|	-	3.8e-05	23.4	7.3	0.0018	17.9	3.5	2.2	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
MTS	PF05175.9	gi|289595708|ref|YP_003482404.1|	-	8e-22	77.4	0.0	1e-21	77.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|289595708|ref|YP_003482404.1|	-	1.2e-15	57.5	0.0	1.4e-15	57.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289595708|ref|YP_003482404.1|	-	7e-13	48.4	0.1	8.8e-13	48.1	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289595708|ref|YP_003482404.1|	-	2.7e-11	44.0	0.0	4e-11	43.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|289595708|ref|YP_003482404.1|	-	2e-08	33.7	0.2	3.3e-08	33.0	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_23	PF13489.1	gi|289595708|ref|YP_003482404.1|	-	1.9e-07	30.9	0.0	4.2e-07	29.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|289595708|ref|YP_003482404.1|	-	5.6e-07	29.1	0.0	2e-06	27.3	0.0	1.7	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
TehB	PF03848.9	gi|289595708|ref|YP_003482404.1|	-	2.3e-06	26.9	0.0	3.4e-06	26.3	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_12	PF08242.7	gi|289595708|ref|YP_003482404.1|	-	3.4e-06	27.4	0.0	1e-05	25.8	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|289595708|ref|YP_003482404.1|	-	7.2e-06	26.3	0.0	9.7e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|289595708|ref|YP_003482404.1|	-	2e-05	24.2	0.0	3.3e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|289595708|ref|YP_003482404.1|	-	2.3e-05	24.8	0.0	3.7e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|289595708|ref|YP_003482404.1|	-	2.7e-05	23.3	0.0	3.9e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.15	gi|289595708|ref|YP_003482404.1|	-	3.4e-05	23.0	0.1	5.1e-05	22.4	0.1	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.11	gi|289595708|ref|YP_003482404.1|	-	0.00012	21.7	0.0	0.00014	21.5	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.5	gi|289595708|ref|YP_003482404.1|	-	0.00044	19.8	0.0	0.00071	19.1	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DUF43	PF01861.11	gi|289595708|ref|YP_003482404.1|	-	0.00062	18.8	0.0	0.00091	18.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
UPF0146	PF03686.8	gi|289595708|ref|YP_003482404.1|	-	0.0016	18.2	0.2	0.0025	17.6	0.1	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
NodS	PF05401.6	gi|289595708|ref|YP_003482404.1|	-	0.0025	17.2	0.0	0.0036	16.7	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_4	PF02390.12	gi|289595708|ref|YP_003482404.1|	-	0.0059	15.6	0.0	0.012	14.6	0.0	1.5	2	0	0	2	2	2	1	Putative	methyltransferase
rRNA_methylase	PF06962.7	gi|289595708|ref|YP_003482404.1|	-	0.0087	15.7	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	Putative	rRNA	methylase
bZIP_2	PF07716.10	gi|289595708|ref|YP_003482404.1|	-	0.02	14.6	0.3	0.035	13.9	0.2	1.3	1	0	0	1	1	1	0	Basic	region	leucine	zipper
PCMT	PF01135.14	gi|289595708|ref|YP_003482404.1|	-	0.021	14.3	0.0	0.028	13.9	0.0	1.1	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
3HCDH_N	PF02737.13	gi|289595708|ref|YP_003482404.1|	-	0.021	14.4	0.0	0.029	14.0	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DREV	PF05219.7	gi|289595708|ref|YP_003482404.1|	-	0.023	13.5	0.0	0.037	12.9	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
Methyltransf_3	PF01596.12	gi|289595708|ref|YP_003482404.1|	-	0.032	13.2	0.0	0.042	12.8	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
DUF2431	PF10354.4	gi|289595708|ref|YP_003482404.1|	-	0.039	13.9	0.0	0.048	13.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2431)
Eco57I	PF07669.6	gi|289595708|ref|YP_003482404.1|	-	0.049	13.9	1.4	0.17	12.2	0.2	2.0	1	1	1	2	2	2	0	Eco57I	restriction-modification	methylase
Pox_MCEL	PF03291.11	gi|289595708|ref|YP_003482404.1|	-	0.061	12.1	2.5	0.062	12.1	0.1	1.8	2	0	0	2	2	2	0	mRNA	capping	enzyme
Ubie_methyltran	PF01209.13	gi|289595708|ref|YP_003482404.1|	-	0.064	12.3	1.0	1.3	8.0	0.1	2.1	1	1	1	2	2	2	0	ubiE/COQ5	methyltransferase	family
Methyltransf_16	PF10294.4	gi|289595708|ref|YP_003482404.1|	-	0.088	12.2	0.1	0.12	11.7	0.1	1.2	1	0	0	1	1	1	0	Putative	methyltransferase
MazG	PF03819.12	gi|289595709|ref|YP_003482405.1|	-	2.2e-10	40.3	0.7	2.2e-10	40.3	0.5	1.7	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|289595709|ref|YP_003482405.1|	-	0.065	13.5	1.0	0.094	13.0	0.7	1.4	1	1	0	1	1	1	0	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|289595709|ref|YP_003482405.1|	-	0.07	13.0	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	MazG-like	family
KaiC	PF06745.8	gi|289595710|ref|YP_003482406.1|	-	0.00015	20.9	0.0	0.0002	20.5	0.0	1.1	1	0	0	1	1	1	1	KaiC
KaiC	PF06745.8	gi|289595711|ref|YP_003482407.1|	-	2.3e-28	98.8	0.0	3e-28	98.4	0.0	1.2	1	0	0	1	1	1	1	KaiC
RecA	PF00154.16	gi|289595711|ref|YP_003482407.1|	-	1.3e-07	30.9	0.1	1.9e-07	30.4	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|289595711|ref|YP_003482407.1|	-	9.3e-06	25.1	0.1	1.4e-05	24.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|289595711|ref|YP_003482407.1|	-	0.0048	16.3	0.0	0.0092	15.4	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
PAXNEB	PF05625.6	gi|289595711|ref|YP_003482407.1|	-	0.013	14.4	0.1	0.026	13.3	0.0	1.4	1	0	0	1	1	1	0	PAXNEB	protein
AAA_22	PF13401.1	gi|289595711|ref|YP_003482407.1|	-	0.03	14.4	0.1	0.082	13.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
PhoH	PF02562.11	gi|289595711|ref|YP_003482407.1|	-	0.039	13.1	0.2	0.49	9.6	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
AAA_19	PF13245.1	gi|289595711|ref|YP_003482407.1|	-	0.067	12.9	0.1	0.12	12.1	0.1	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|289595711|ref|YP_003482407.1|	-	0.08	12.9	0.1	0.11	12.4	0.1	1.2	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|289595711|ref|YP_003482407.1|	-	0.084	12.5	0.1	0.21	11.2	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|289595711|ref|YP_003482407.1|	-	0.092	12.3	1.2	2.3	7.7	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
Rad51	PF08423.6	gi|289595711|ref|YP_003482407.1|	-	0.1	11.4	0.1	0.16	10.8	0.0	1.3	1	0	0	1	1	1	0	Rad51
Acetyltransf_1	PF00583.19	gi|289595712|ref|YP_003482408.1|	-	7.8e-12	45.0	0.1	1.4e-11	44.2	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
FR47	PF08445.5	gi|289595712|ref|YP_003482408.1|	-	3e-11	42.9	0.0	4.6e-11	42.3	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|289595712|ref|YP_003482408.1|	-	7.4e-08	32.4	0.3	9.5e-07	28.8	0.2	2.1	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|289595712|ref|YP_003482408.1|	-	3e-06	27.2	0.0	7.3e-06	26.0	0.0	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|289595712|ref|YP_003482408.1|	-	0.00025	20.9	0.1	0.00077	19.3	0.0	2.0	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|289595712|ref|YP_003482408.1|	-	0.00052	20.2	1.0	0.0031	17.6	0.7	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|289595712|ref|YP_003482408.1|	-	0.01	15.9	0.0	0.036	14.1	0.0	1.8	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
PhoU_div	PF01865.11	gi|289595714|ref|YP_003482410.1|	-	1.4e-34	119.1	14.0	1.7e-34	118.9	9.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
DUF641	PF04859.7	gi|289595714|ref|YP_003482410.1|	-	0.03	14.0	4.8	0.048	13.4	0.5	2.2	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
Apc4	PF12896.2	gi|289595714|ref|YP_003482410.1|	-	0.032	13.5	3.5	2.8	7.2	0.3	2.4	1	1	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	4
Spc97_Spc98	PF04130.8	gi|289595714|ref|YP_003482410.1|	-	0.081	11.2	0.2	0.14	10.4	0.1	1.4	1	1	0	1	1	1	0	Spc97	/	Spc98	family
HMG_box_2	PF09011.5	gi|289595714|ref|YP_003482410.1|	-	0.092	13.1	5.3	0.11	12.8	0.6	2.4	2	0	0	2	2	2	0	HMG-box	domain
Ribosomal_L22	PF00237.14	gi|289595714|ref|YP_003482410.1|	-	0.36	10.7	2.3	0.52	10.2	0.3	2.0	2	0	0	2	2	2	0	Ribosomal	protein	L22p/L17e
HMG_box	PF00505.14	gi|289595714|ref|YP_003482410.1|	-	0.41	10.9	3.4	0.48	10.7	0.1	2.4	2	0	0	2	2	2	0	HMG	(high	mobility	group)	box
DUF1664	PF07889.7	gi|289595714|ref|YP_003482410.1|	-	0.55	10.0	7.8	7.3	6.4	0.2	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
PhoU	PF01895.14	gi|289595714|ref|YP_003482410.1|	-	0.67	10.4	13.0	0.092	13.1	1.6	2.9	1	1	1	2	2	2	0	PhoU	domain
PVL_ORF50	PF07768.6	gi|289595714|ref|YP_003482410.1|	-	0.75	9.8	3.9	0.23	11.4	0.1	2.1	2	2	0	2	2	2	0	PVL	ORF-50-like	family
EF-hand_like	PF09279.6	gi|289595714|ref|YP_003482410.1|	-	1.5	8.9	4.8	1.1	9.3	0.5	2.3	2	1	0	2	2	2	0	Phosphoinositide-specific	phospholipase	C,	efhand-like
DUF724	PF05266.9	gi|289595714|ref|YP_003482410.1|	-	2.6	7.6	9.9	0.21	11.1	1.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF724)
MT0933_antitox	PF14013.1	gi|289595714|ref|YP_003482410.1|	-	2.8	8.0	5.3	45	4.2	0.0	3.3	3	0	0	3	3	3	0	MT0933-like	antitoxin	protein
PHO4	PF01384.15	gi|289595715|ref|YP_003482411.1|	-	9.3e-52	175.6	34.5	1.6e-51	174.9	23.9	1.4	1	0	0	1	1	1	1	Phosphate	transporter	family
N6_N4_Mtase	PF01555.13	gi|289595716|ref|YP_003482412.1|	-	6.3e-22	78.1	1.1	1.3e-12	47.7	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|289595716|ref|YP_003482412.1|	-	2e-11	43.9	0.0	2.9e-11	43.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|289595716|ref|YP_003482412.1|	-	1.7e-05	24.5	0.0	2.7e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_18	PF12847.2	gi|289595716|ref|YP_003482412.1|	-	7.6e-05	23.2	0.0	0.00012	22.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|289595716|ref|YP_003482412.1|	-	0.00011	21.6	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.11	gi|289595716|ref|YP_003482412.1|	-	0.0017	18.0	0.0	0.0023	17.5	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.5	gi|289595716|ref|YP_003482412.1|	-	0.0061	16.1	0.0	0.009	15.5	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
VP9	PF09625.5	gi|289595716|ref|YP_003482412.1|	-	0.042	13.6	0.1	0.21	11.4	0.0	2.2	2	1	0	2	2	2	0	VP9	protein
CMAS	PF02353.15	gi|289595716|ref|YP_003482412.1|	-	0.064	12.3	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_31	PF13847.1	gi|289595716|ref|YP_003482412.1|	-	0.064	12.8	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
YkuD	PF03734.9	gi|289595716|ref|YP_003482412.1|	-	0.088	13.0	0.0	9.6	6.4	0.0	2.4	2	0	0	2	2	2	0	L,D-transpeptidase	catalytic	domain
AA_kinase	PF00696.23	gi|289595717|ref|YP_003482413.1|	-	2.3e-29	102.6	0.0	2.6e-29	102.4	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Sec7_N	PF12783.2	gi|289595718|ref|YP_003482414.1|	-	0.024	14.0	0.7	0.036	13.5	0.5	1.2	1	0	0	1	1	1	0	Guanine	nucleotide	exchange	factor	in	Golgi	transport	N-terminal
DUF4383	PF14325.1	gi|289595718|ref|YP_003482414.1|	-	0.064	13.2	1.9	0.12	12.3	1.3	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4383)
DUF1673	PF07895.6	gi|289595718|ref|YP_003482414.1|	-	0.082	12.4	3.7	0.092	12.2	2.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
DUF872	PF05915.7	gi|289595718|ref|YP_003482414.1|	-	5.5	6.8	6.8	3.3	7.6	0.0	2.7	2	1	1	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Tetraspannin	PF00335.15	gi|289595718|ref|YP_003482414.1|	-	9.4	5.4	9.0	34	3.6	6.2	1.8	1	1	0	1	1	1	0	Tetraspanin	family
DS	PF01916.12	gi|289595719|ref|YP_003482415.1|	-	1.2e-92	310.2	0.0	1.4e-92	309.9	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Mrr_N	PF14338.1	gi|289595719|ref|YP_003482415.1|	-	0.017	15.1	0.0	0.038	14.0	0.0	1.5	1	0	0	1	1	1	0	Mrr	N-terminal	domain
tRNA-synt_1b	PF00579.20	gi|289595720|ref|YP_003482416.1|	-	1.9e-44	151.9	0.0	2.4e-44	151.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
DUF1403	PF07183.6	gi|289595720|ref|YP_003482416.1|	-	0.1	11.9	0.2	0.32	10.3	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1403)
SpoU_methylase	PF00588.14	gi|289595721|ref|YP_003482417.1|	-	3.2e-31	108.0	0.0	4.3e-31	107.7	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Cation_efflux	PF01545.16	gi|289595722|ref|YP_003482418.1|	-	9.1e-63	211.9	6.6	1.2e-62	211.5	4.6	1.1	1	0	0	1	1	1	1	Cation	efflux	family
Nitro_FeMo-Co	PF02579.12	gi|289595722|ref|YP_003482418.1|	-	5e-14	52.1	0.0	1.1e-13	51.0	0.0	1.6	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
TM1506	PF08973.5	gi|289595722|ref|YP_003482418.1|	-	9.3e-05	21.9	0.1	0.00035	20.1	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1893)
PRE_C2HC	PF07530.6	gi|289595722|ref|YP_003482418.1|	-	0.0061	16.4	1.4	0.023	14.5	0.9	2.0	1	1	0	1	1	1	1	Associated	with	zinc	fingers
DUF2273	PF10031.4	gi|289595722|ref|YP_003482418.1|	-	0.024	14.2	3.1	0.024	14.2	2.2	3.5	5	0	0	5	5	5	0	Small	integral	membrane	protein	(DUF2273)
DUF1385	PF07136.6	gi|289595722|ref|YP_003482418.1|	-	0.27	10.2	6.6	0.41	9.6	3.3	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1385)
SPC12	PF06645.8	gi|289595722|ref|YP_003482418.1|	-	0.31	10.8	12.6	0.47	10.3	0.2	3.4	3	1	0	3	3	3	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF3278	PF11683.3	gi|289595722|ref|YP_003482418.1|	-	0.34	10.8	11.0	0.095	12.7	3.9	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3278)
DUF1469	PF07332.6	gi|289595722|ref|YP_003482418.1|	-	0.4	10.4	2.1	0.64	9.7	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF456	PF04306.8	gi|289595722|ref|YP_003482418.1|	-	1.5	8.8	8.0	0.47	10.4	3.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF456)
TctB	PF07331.6	gi|289595723|ref|YP_003482419.1|	-	0.14	11.8	3.8	0.14	11.7	2.6	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
ABC2_membrane_2	PF12679.2	gi|289595723|ref|YP_003482419.1|	-	1.2	7.9	7.1	1.4	7.7	4.9	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
SdpI	PF13630.1	gi|289595723|ref|YP_003482419.1|	-	3.3	7.4	7.5	4.6	7.0	5.2	1.3	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
Nitro_FeMo-Co	PF02579.12	gi|289595725|ref|YP_003482421.1|	-	5e-19	68.1	0.4	6.6e-19	67.7	0.0	1.4	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
DUF637	PF04830.8	gi|289595725|ref|YP_003482421.1|	-	0.013	15.1	0.1	0.016	14.8	0.1	1.1	1	0	0	1	1	1	0	Possible	hemagglutinin	(DUF637)
Prefoldin_2	PF01920.15	gi|289595725|ref|YP_003482421.1|	-	0.12	12.2	7.6	0.18	11.5	5.3	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
KaiC	PF06745.8	gi|289595726|ref|YP_003482422.1|	-	2.6e-55	187.0	0.4	2.9e-55	186.8	0.3	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289595726|ref|YP_003482422.1|	-	3.1e-12	46.2	0.0	4.5e-12	45.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|289595726|ref|YP_003482422.1|	-	1.4e-06	27.4	0.3	2.7e-05	23.2	0.2	2.1	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
GvpD	PF07088.6	gi|289595726|ref|YP_003482422.1|	-	9.6e-05	20.8	0.0	0.00017	20.0	0.0	1.4	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_22	PF13401.1	gi|289595726|ref|YP_003482422.1|	-	0.0001	22.4	0.1	0.00033	20.7	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|289595726|ref|YP_003482422.1|	-	0.00019	21.2	0.1	0.00025	20.7	0.0	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_19	PF13245.1	gi|289595726|ref|YP_003482422.1|	-	0.0004	20.0	0.0	0.00081	19.0	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|289595726|ref|YP_003482422.1|	-	0.0022	18.7	1.1	0.0098	16.7	0.8	2.0	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|289595726|ref|YP_003482422.1|	-	0.004	16.5	0.0	0.011	15.2	0.0	1.7	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|289595726|ref|YP_003482422.1|	-	0.005	16.7	0.1	0.029	14.2	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
Zot	PF05707.7	gi|289595726|ref|YP_003482422.1|	-	0.0082	15.6	0.0	0.013	14.9	0.0	1.4	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
T2SE	PF00437.15	gi|289595726|ref|YP_003482422.1|	-	0.01	14.7	0.0	0.02	13.7	0.0	1.5	1	1	0	1	1	1	1	Type	II/IV	secretion	system	protein
RecA	PF00154.16	gi|289595726|ref|YP_003482422.1|	-	0.011	14.8	0.1	0.036	13.1	0.1	1.7	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
AAA_10	PF12846.2	gi|289595726|ref|YP_003482422.1|	-	0.012	15.0	0.0	0.015	14.7	0.0	1.3	1	1	0	1	1	1	0	AAA-like	domain
AAA	PF00004.24	gi|289595726|ref|YP_003482422.1|	-	0.014	15.6	0.1	1.4	9.0	0.0	2.4	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|289595726|ref|YP_003482422.1|	-	0.017	14.9	0.0	0.025	14.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|289595726|ref|YP_003482422.1|	-	0.024	13.7	0.1	0.05	12.6	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
DUF2075	PF09848.4	gi|289595726|ref|YP_003482422.1|	-	0.037	13.0	0.0	0.057	12.3	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_29	PF13555.1	gi|289595726|ref|YP_003482422.1|	-	0.069	12.6	0.0	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|289595726|ref|YP_003482422.1|	-	0.07	13.4	0.7	0.11	12.7	0.5	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|289595726|ref|YP_003482422.1|	-	0.096	12.2	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|289595726|ref|YP_003482422.1|	-	0.1	12.2	0.1	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
MMR_HSR1	PF01926.18	gi|289595726|ref|YP_003482422.1|	-	0.11	12.4	0.1	0.31	10.9	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
TF_Zn_Ribbon	PF08271.7	gi|289595727|ref|YP_003482423.1|	-	4e-06	26.0	3.4	9.1e-06	24.8	2.3	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|289595727|ref|YP_003482423.1|	-	9.5e-05	22.1	0.7	0.00014	21.5	0.5	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|289595727|ref|YP_003482423.1|	-	0.00028	20.4	0.9	0.00057	19.4	0.6	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|289595727|ref|YP_003482423.1|	-	0.014	15.3	2.1	3.6	7.6	0.1	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF35_N	PF12172.3	gi|289595727|ref|YP_003482423.1|	-	0.017	14.9	0.8	0.049	13.5	0.1	1.9	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Ribosomal_L37ae	PF01780.14	gi|289595727|ref|YP_003482423.1|	-	0.022	14.6	0.5	0.04	13.7	0.4	1.4	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-Mss51	PF13824.1	gi|289595727|ref|YP_003482423.1|	-	0.029	14.2	1.9	0.03	14.1	0.1	2.0	3	0	0	3	3	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Imm23	PF15593.1	gi|289595727|ref|YP_003482423.1|	-	0.035	14.3	3.6	0.096	12.9	1.9	1.8	1	1	1	2	2	2	0	Immunity	protein	23
Colicin	PF01024.14	gi|289595727|ref|YP_003482423.1|	-	0.042	13.4	0.6	0.073	12.6	0.0	1.6	2	0	0	2	2	2	0	Colicin	pore	forming	domain
A2L_zn_ribbon	PF08792.5	gi|289595727|ref|YP_003482423.1|	-	0.05	13.0	2.5	0.12	11.8	1.7	1.7	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
RRN7	PF11781.3	gi|289595727|ref|YP_003482423.1|	-	0.056	12.9	0.7	0.1	12.1	0.5	1.4	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Lar_restr_allev	PF14354.1	gi|289595727|ref|YP_003482423.1|	-	0.059	13.6	0.2	0.12	12.7	0.1	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF2321	PF10083.4	gi|289595727|ref|YP_003482423.1|	-	0.063	12.7	0.1	0.44	10.0	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
RPA_interact_C	PF14768.1	gi|289595727|ref|YP_003482423.1|	-	0.11	12.9	0.1	0.17	12.3	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
zf-C2H2_4	PF13894.1	gi|289595727|ref|YP_003482423.1|	-	0.15	12.4	0.9	12	6.5	0.0	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
UPF0547	PF10571.4	gi|289595727|ref|YP_003482423.1|	-	0.37	10.5	5.6	2.1	8.1	3.9	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
DUF1178	PF06676.6	gi|289595727|ref|YP_003482423.1|	-	0.37	10.9	2.2	1.1	9.4	0.6	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1178)
Rubredoxin	PF00301.15	gi|289595727|ref|YP_003482423.1|	-	0.57	10.0	2.5	4.8	7.1	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
Rad50_zn_hook	PF04423.9	gi|289595727|ref|YP_003482423.1|	-	0.83	9.1	5.5	3.7	7.0	1.0	2.8	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-C2H2	PF00096.21	gi|289595727|ref|YP_003482423.1|	-	0.98	9.9	4.7	3.8	8.0	0.9	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
TFIIS_C	PF01096.13	gi|289595727|ref|YP_003482423.1|	-	1.3	8.7	3.2	60	3.3	2.2	2.3	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1	PF03811.8	gi|289595727|ref|YP_003482423.1|	-	2.6	7.6	4.1	14	5.3	2.8	2.1	1	1	0	1	1	1	0	InsA	N-terminal	domain
RMF	PF04957.7	gi|289595728|ref|YP_003482424.1|	-	0.042	13.5	0.0	0.11	12.1	0.0	1.7	1	0	0	1	1	1	0	Ribosome	modulation	factor
Peptidase_M42	PF05343.9	gi|289595728|ref|YP_003482424.1|	-	0.084	11.6	0.0	0.099	11.3	0.0	1.1	1	0	0	1	1	1	0	M42	glutamyl	aminopeptidase
Arch_flagellin	PF01917.11	gi|289595729|ref|YP_003482425.1|	-	3.6e-19	69.1	11.8	1.5e-10	41.0	0.5	3.0	2	1	1	3	3	3	2	Archaebacterial	flagellin
fn3	PF00041.16	gi|289595729|ref|YP_003482425.1|	-	0.32	11.1	10.2	0.2	11.8	1.0	3.0	3	0	0	3	3	3	0	Fibronectin	type	III	domain
2-Hacid_dh_C	PF02826.14	gi|289595730|ref|YP_003482426.1|	-	5.3e-65	217.8	0.0	1.1e-64	216.8	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|289595730|ref|YP_003482426.1|	-	1.9e-37	127.6	0.0	2.2e-37	127.5	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|289595730|ref|YP_003482426.1|	-	5.5e-06	26.3	0.0	9.5e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|289595730|ref|YP_003482426.1|	-	7.1e-05	23.1	0.0	0.00017	21.9	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
IlvN	PF07991.7	gi|289595730|ref|YP_003482426.1|	-	0.0002	20.8	0.2	0.0085	15.4	0.0	2.9	2	2	1	3	3	3	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Pyr_redox_2	PF07992.9	gi|289595730|ref|YP_003482426.1|	-	0.023	14.5	0.2	0.42	10.4	0.0	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.13	gi|289595730|ref|YP_003482426.1|	-	0.031	14.2	0.6	0.6	10.1	0.0	2.6	2	0	0	2	2	2	0	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|289595730|ref|YP_003482426.1|	-	0.064	12.8	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Saccharop_dh	PF03435.13	gi|289595730|ref|YP_003482426.1|	-	0.14	11.1	0.0	1.3	7.9	0.0	2.1	2	0	0	2	2	2	0	Saccharopine	dehydrogenase
DUF4405	PF14358.1	gi|289595731|ref|YP_003482427.1|	-	2.3e-11	43.6	4.2	2.7e-11	43.4	2.9	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4405)
Ferric_reduct	PF01794.14	gi|289595731|ref|YP_003482427.1|	-	0.001	19.1	0.9	0.0011	18.9	0.6	1.1	1	0	0	1	1	1	1	Ferric	reductase	like	transmembrane	component
Ni_hydr_CYTB	PF01292.15	gi|289595731|ref|YP_003482427.1|	-	0.0037	16.6	1.2	0.0044	16.4	0.8	1.1	1	0	0	1	1	1	1	Prokaryotic	cytochrome	b561
Cytochrom_B_N	PF00033.14	gi|289595731|ref|YP_003482427.1|	-	0.0055	16.0	2.6	0.0067	15.7	1.8	1.2	1	0	0	1	1	1	1	Cytochrome	b(N-terminal)/b6/petB
tRNA-synt_His	PF13393.1	gi|289595732|ref|YP_003482428.1|	-	6.7e-55	186.3	0.0	8.9e-55	185.9	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|289595732|ref|YP_003482428.1|	-	4.8e-19	68.5	0.0	1e-18	67.5	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|289595732|ref|YP_003482428.1|	-	2.8e-17	62.4	0.4	5.6e-17	61.4	0.3	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|289595732|ref|YP_003482428.1|	-	0.01	15.0	0.0	0.028	13.5	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
PolyA_pol_RNAbd	PF12627.2	gi|289595732|ref|YP_003482428.1|	-	0.03	13.8	0.2	0.073	12.6	0.1	1.7	1	0	0	1	1	1	0	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
MatE	PF01554.13	gi|289595733|ref|YP_003482429.1|	-	6.1e-60	201.5	31.0	1e-30	106.5	9.0	2.4	2	0	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.1	gi|289595733|ref|YP_003482429.1|	-	4.1e-05	23.4	7.3	4.1e-05	23.4	5.1	5.0	1	1	4	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF835	PF05763.7	gi|289595734|ref|YP_003482430.1|	-	0.0014	18.2	0.1	0.0027	17.2	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
Fer4	PF00037.22	gi|289595735|ref|YP_003482431.1|	-	2.1e-10	39.7	12.1	8e-07	28.4	1.4	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289595735|ref|YP_003482431.1|	-	4.2e-09	36.6	8.3	5.3e-09	36.3	5.2	1.6	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289595735|ref|YP_003482431.1|	-	1.5e-08	34.2	10.6	1.8e-06	27.6	8.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289595735|ref|YP_003482431.1|	-	4.3e-08	32.8	19.0	1.4e-05	24.8	7.4	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289595735|ref|YP_003482431.1|	-	6.5e-08	32.1	12.1	1.1e-06	28.2	1.0	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289595735|ref|YP_003482431.1|	-	4.3e-06	26.3	12.1	0.0052	16.6	1.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|289595735|ref|YP_003482431.1|	-	6.9e-06	26.2	9.8	3e-05	24.2	6.9	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289595735|ref|YP_003482431.1|	-	1.5e-05	25.4	6.4	0.0018	18.7	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|289595735|ref|YP_003482431.1|	-	8.7e-05	23.1	7.5	0.006	17.2	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|289595735|ref|YP_003482431.1|	-	0.00012	22.0	13.1	0.013	15.7	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|289595735|ref|YP_003482431.1|	-	0.0004	20.3	8.9	0.00065	19.6	6.2	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|289595735|ref|YP_003482431.1|	-	0.0015	18.4	5.3	0.0037	17.1	3.7	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|289595735|ref|YP_003482431.1|	-	0.0016	18.8	8.0	0.086	13.2	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289595735|ref|YP_003482431.1|	-	0.0018	18.6	11.0	0.1	13.0	1.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289595735|ref|YP_003482431.1|	-	0.01	16.1	12.3	0.27	11.6	8.5	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF3079	PF11278.3	gi|289595735|ref|YP_003482431.1|	-	0.021	14.3	0.7	0.021	14.3	0.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3079)
zf-FCS	PF06467.9	gi|289595735|ref|YP_003482431.1|	-	0.068	12.8	8.5	1.3	8.7	1.6	2.3	2	0	0	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Toxin_20	PF08089.6	gi|289595735|ref|YP_003482431.1|	-	0.73	9.7	7.7	1.6	8.6	5.3	1.6	1	0	0	1	1	1	0	Huwentoxin-II	family
Fer4_3	PF12798.2	gi|289595735|ref|YP_003482431.1|	-	0.77	10.4	14.2	3.2	8.5	2.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Paired_CXXCH_1	PF09699.5	gi|289595735|ref|YP_003482431.1|	-	0.93	9.0	5.3	2.4	7.7	3.7	1.8	1	1	0	1	1	1	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
c-SKI_SMAD_bind	PF08782.5	gi|289595735|ref|YP_003482431.1|	-	2.9	8.0	7.3	3.6	7.7	1.0	2.1	1	1	1	2	2	2	0	c-SKI	Smad4	binding	domain
DUF678	PF05077.7	gi|289595735|ref|YP_003482431.1|	-	8.4	6.4	7.0	47	4.0	4.8	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF678)
POR_N	PF01855.14	gi|289595736|ref|YP_003482432.1|	-	1e-72	244.3	0.1	1.5e-72	243.8	0.1	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|289595736|ref|YP_003482432.1|	-	7e-05	22.7	0.0	0.00016	21.5	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|289595736|ref|YP_003482432.1|	-	0.0028	17.1	0.1	0.0073	15.8	0.1	1.7	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
FeThRed_A	PF02941.10	gi|289595736|ref|YP_003482432.1|	-	0.082	12.8	0.9	4.1	7.4	0.0	3.5	4	0	0	4	4	4	0	Ferredoxin	thioredoxin	reductase	variable	alpha	chain
TPP_enzyme_C	PF02775.16	gi|289595737|ref|YP_003482433.1|	-	2.8e-36	124.4	0.1	4.1e-36	123.8	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR	PF01558.13	gi|289595738|ref|YP_003482434.1|	-	5.5e-41	140.3	0.2	6.5e-41	140.0	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
SHMT	PF00464.14	gi|289595739|ref|YP_003482435.1|	-	4.6e-80	268.9	0.0	5.7e-80	268.6	0.0	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|289595739|ref|YP_003482435.1|	-	9.9e-08	31.3	0.0	5.2e-07	28.9	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
SelA	PF03841.8	gi|289595739|ref|YP_003482435.1|	-	0.029	13.1	0.0	0.046	12.4	0.0	1.3	1	0	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
DegT_DnrJ_EryC1	PF01041.12	gi|289595739|ref|YP_003482435.1|	-	0.078	12.0	0.0	0.43	9.5	0.0	2.0	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
TPR_MLP1_2	PF07926.7	gi|289595739|ref|YP_003482435.1|	-	0.16	11.6	0.5	3.3	7.4	0.0	2.3	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
DJ-1_PfpI	PF01965.19	gi|289595740|ref|YP_003482436.1|	-	8e-39	132.4	0.0	9.8e-39	132.1	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|289595740|ref|YP_003482436.1|	-	4.7e-08	32.4	0.0	5.8e-08	32.1	0.0	1.2	1	0	0	1	1	1	1	Putative	amidotransferase
GATase	PF00117.23	gi|289595740|ref|YP_003482436.1|	-	0.0003	20.3	0.0	0.00033	20.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_5	PF13507.1	gi|289595740|ref|YP_003482436.1|	-	0.00049	19.0	0.0	0.0037	16.2	0.0	1.9	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|289595740|ref|YP_003482436.1|	-	0.0024	17.4	0.0	0.0036	16.9	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.14	gi|289595740|ref|YP_003482436.1|	-	0.038	13.6	0.0	0.072	12.7	0.0	1.5	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
Met_gamma_lyase	PF06838.6	gi|289595740|ref|YP_003482436.1|	-	0.052	11.8	0.0	0.069	11.4	0.0	1.1	1	0	0	1	1	1	0	Methionine	gamma-lyase
BPL_N	PF09825.4	gi|289595741|ref|YP_003482437.1|	-	0.00025	19.9	0.0	0.00056	18.8	0.0	1.5	2	0	0	2	2	2	1	Biotin-protein	ligase,	N	terminal
ThuA	PF06283.6	gi|289595741|ref|YP_003482437.1|	-	0.0012	18.5	0.0	0.002	17.8	0.0	1.3	1	0	0	1	1	1	1	Trehalose	utilisation
DUF1355	PF07090.6	gi|289595741|ref|YP_003482437.1|	-	0.069	12.5	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1355)
Peptidase_S51	PF03575.12	gi|289595741|ref|YP_003482437.1|	-	0.077	12.7	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	S51
Molybdopterin	PF00384.17	gi|289595742|ref|YP_003482438.1|	-	7.5e-43	146.8	0.0	3.6e-42	144.6	0.0	1.8	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|289595742|ref|YP_003482438.1|	-	4.7e-19	68.2	0.0	1.3e-18	66.8	0.0	1.7	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|289595742|ref|YP_003482438.1|	-	0.0001	22.0	0.1	0.00022	20.9	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Radical_SAM	PF04055.16	gi|289595743|ref|YP_003482439.1|	-	1.3e-12	48.2	0.0	4.2e-12	46.5	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|289595743|ref|YP_003482439.1|	-	0.06	13.2	0.0	0.21	11.4	0.0	1.9	1	1	0	1	1	1	0	B12	binding	domain
TrmB	PF01978.14	gi|289595744|ref|YP_003482440.1|	-	1.3e-05	24.7	0.0	3.2e-05	23.5	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|289595744|ref|YP_003482440.1|	-	0.03	13.9	0.0	0.06	13.0	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Penicillinase_R	PF03965.11	gi|289595744|ref|YP_003482440.1|	-	0.086	12.9	0.1	0.19	11.8	0.1	1.8	1	1	0	1	1	1	0	Penicillinase	repressor
CorA	PF01544.13	gi|289595744|ref|YP_003482440.1|	-	0.1	11.6	0.6	0.12	11.3	0.4	1.1	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Fe_dep_repress	PF01325.14	gi|289595744|ref|YP_003482440.1|	-	0.11	12.3	0.5	0.25	11.3	0.0	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
SSV1_ORF_D-335	PF07935.6	gi|289595744|ref|YP_003482440.1|	-	0.11	12.1	0.1	7.1	6.4	0.0	2.4	2	0	0	2	2	2	0	ORF	D-335-like	protein
Ribosomal_L16	PF00252.13	gi|289595745|ref|YP_003482441.1|	-	4.5e-36	123.5	0.1	5.1e-36	123.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
DUF835	PF05763.7	gi|289595746|ref|YP_003482442.1|	-	1.5e-27	95.8	0.7	1.9e-27	95.4	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
PP2	PF14299.1	gi|289595746|ref|YP_003482442.1|	-	0.036	13.4	0.5	2.2	7.6	0.0	2.1	1	1	1	2	2	2	0	Phloem	protein	2
BESS	PF02944.15	gi|289595746|ref|YP_003482442.1|	-	0.12	11.9	0.8	0.49	9.9	0.0	2.5	3	0	0	3	3	3	0	BESS	motif
Nol1_Nop2_Fmu	PF01189.12	gi|289595747|ref|YP_003482443.1|	-	5.5e-25	88.2	0.0	8.1e-25	87.7	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
MTS	PF05175.9	gi|289595747|ref|YP_003482443.1|	-	5.5e-08	32.3	0.0	1.1e-07	31.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|289595747|ref|YP_003482443.1|	-	2.9e-07	30.2	0.0	1.1e-06	28.2	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289595747|ref|YP_003482443.1|	-	9.6e-05	22.9	0.0	0.00058	20.4	0.0	2.3	2	2	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289595747|ref|YP_003482443.1|	-	0.0002	21.3	0.0	0.00092	19.2	0.0	2.1	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|289595747|ref|YP_003482443.1|	-	0.00097	18.7	0.0	0.0023	17.5	0.0	1.6	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.1	gi|289595747|ref|YP_003482443.1|	-	0.0057	16.9	0.0	0.02	15.2	0.0	2.1	2	1	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289595747|ref|YP_003482443.1|	-	0.0077	15.3	0.0	0.019	14.1	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
3HCDH_N	PF02737.13	gi|289595747|ref|YP_003482443.1|	-	0.074	12.7	0.1	0.75	9.4	0.0	2.4	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PrmA	PF06325.8	gi|289595747|ref|YP_003482443.1|	-	0.079	12.0	0.0	0.19	10.8	0.0	1.6	2	0	0	2	2	2	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
z-alpha	PF02295.12	gi|289595747|ref|YP_003482443.1|	-	0.13	12.0	0.6	0.32	10.7	0.0	1.9	2	0	0	2	2	2	0	Adenosine	deaminase	z-alpha	domain
Ribosom_S12_S23	PF00164.20	gi|289595748|ref|YP_003482444.1|	-	4.8e-43	145.4	0.7	5.4e-43	145.2	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
DUF737	PF05300.6	gi|289595748|ref|YP_003482444.1|	-	0.1	12.5	0.6	0.16	11.8	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF737)
Ribosomal_S7	PF00177.16	gi|289595749|ref|YP_003482445.1|	-	4.5e-42	143.1	6.8	5.2e-42	142.9	4.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DUF2247	PF10004.4	gi|289595749|ref|YP_003482445.1|	-	0.049	13.3	0.0	0.075	12.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2247)
GTP_EFTU	PF00009.22	gi|289595750|ref|YP_003482446.1|	-	1.4e-59	200.6	0.1	2.3e-59	199.9	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|289595750|ref|YP_003482446.1|	-	1.2e-26	92.6	0.0	3.7e-26	91.0	0.0	1.9	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|289595750|ref|YP_003482446.1|	-	2e-24	85.2	0.2	5.7e-24	83.7	0.1	1.9	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|289595750|ref|YP_003482446.1|	-	1.2e-23	82.7	0.3	5.6e-23	80.6	0.0	2.3	3	0	0	3	3	3	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|289595750|ref|YP_003482446.1|	-	7.4e-16	58.0	0.5	2.6e-15	56.2	0.1	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU	PF00009.22	gi|289595751|ref|YP_003482447.1|	-	1.1e-60	204.2	0.0	1.5e-60	203.8	0.0	1.1	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|289595751|ref|YP_003482447.1|	-	3.8e-30	103.9	0.6	1.6e-29	101.9	0.1	2.2	3	0	0	3	3	3	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|289595751|ref|YP_003482447.1|	-	2.6e-25	88.3	2.4	2.9e-22	78.5	0.4	2.7	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|289595751|ref|YP_003482447.1|	-	1.1e-07	31.3	0.5	2.5e-07	30.2	0.3	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|289595751|ref|YP_003482447.1|	-	8.5e-07	28.9	0.0	1.5e-05	24.9	0.0	2.3	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Gtr1_RagA	PF04670.7	gi|289595751|ref|YP_003482447.1|	-	0.00051	19.2	0.0	0.0082	15.2	0.0	2.1	1	1	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Ras	PF00071.17	gi|289595751|ref|YP_003482447.1|	-	0.0021	17.4	0.1	0.0066	15.8	0.0	1.8	2	0	0	2	2	2	1	Ras	family
Miro	PF08477.8	gi|289595751|ref|YP_003482447.1|	-	0.0041	17.5	0.1	0.074	13.5	0.1	2.6	1	1	0	1	1	1	1	Miro-like	protein
FeoB_N	PF02421.13	gi|289595751|ref|YP_003482447.1|	-	0.058	12.6	0.0	0.54	9.5	0.0	2.5	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
SRPRB	PF09439.5	gi|289595751|ref|YP_003482447.1|	-	0.065	12.4	0.0	0.84	8.8	0.0	2.4	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Arf	PF00025.16	gi|289595751|ref|YP_003482447.1|	-	0.068	12.4	0.1	23	4.1	0.0	3.2	1	1	2	3	3	3	0	ADP-ribosylation	factor	family
Dynamin_N	PF00350.18	gi|289595751|ref|YP_003482447.1|	-	0.088	12.6	0.1	13	5.5	0.0	2.4	1	1	1	2	2	2	0	Dynamin	family
Ribosomal_S10	PF00338.17	gi|289595752|ref|YP_003482448.1|	-	3.4e-33	113.3	0.0	3.8e-33	113.2	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
DisA_N	PF02457.11	gi|289595753|ref|YP_003482449.1|	-	9.8e-21	73.1	0.1	1.6e-20	72.4	0.1	1.3	1	0	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
Peptidase_M54	PF07998.6	gi|289595753|ref|YP_003482449.1|	-	0.015	15.0	0.1	0.022	14.5	0.1	1.2	1	0	0	1	1	1	0	Peptidase	family	M54
Translin	PF01997.11	gi|289595754|ref|YP_003482450.1|	-	1.8e-31	109.3	0.4	2.1e-31	109.0	0.3	1.1	1	0	0	1	1	1	1	Translin	family
Laminin_B	PF00052.13	gi|289595754|ref|YP_003482450.1|	-	0.063	12.8	0.1	3.2	7.3	0.0	2.1	2	0	0	2	2	2	0	Laminin	B	(Domain	IV)
PhoU	PF01895.14	gi|289595754|ref|YP_003482450.1|	-	1.2	9.6	5.3	0.95	9.9	0.3	2.6	2	1	0	2	2	2	0	PhoU	domain
Prok-JAB	PF14464.1	gi|289595755|ref|YP_003482451.1|	-	6.5e-13	48.1	0.0	9.9e-13	47.5	0.0	1.3	1	1	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
RadC	PF04002.10	gi|289595755|ref|YP_003482451.1|	-	0.006	16.2	0.0	0.0094	15.6	0.0	1.5	1	1	0	1	1	1	1	RadC-like	JAB	domain
JAB	PF01398.16	gi|289595755|ref|YP_003482451.1|	-	0.041	13.6	0.0	0.051	13.3	0.0	1.4	1	1	0	1	1	1	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
Toxin-JAB1	PF15659.1	gi|289595755|ref|YP_003482451.1|	-	0.048	13.5	0.0	0.068	13.0	0.0	1.3	1	0	0	1	1	1	0	JAB-like	toxin	1
NAD_kinase	PF01513.16	gi|289595756|ref|YP_003482452.1|	-	3.6e-55	186.7	0.1	1e-54	185.2	0.1	1.6	1	1	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|289595756|ref|YP_003482452.1|	-	0.017	14.5	0.1	0.031	13.7	0.1	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
Inositol_P	PF00459.20	gi|289595757|ref|YP_003482453.1|	-	1.8e-33	116.0	0.0	2.2e-33	115.7	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|289595757|ref|YP_003482453.1|	-	0.0057	15.5	0.2	0.11	11.3	0.0	2.0	2	0	0	2	2	2	2	Fructose-1-6-bisphosphatase
NiFeSe_Hases	PF00374.14	gi|289595758|ref|YP_003482454.1|	-	9e-38	130.2	0.1	7e-20	71.2	0.0	2.5	2	1	0	2	2	2	2	Nickel-dependent	hydrogenase
TPR_14	PF13428.1	gi|289595758|ref|YP_003482454.1|	-	0.034	14.7	0.5	0.08	13.6	0.3	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
DUF3150	PF11348.3	gi|289595758|ref|YP_003482454.1|	-	0.045	12.8	0.0	0.13	11.3	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3150)
Oxidored_q6	PF01058.17	gi|289595759|ref|YP_003482455.1|	-	1.3e-20	73.3	0.0	2e-20	72.7	0.0	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
CMD	PF02627.15	gi|289595759|ref|YP_003482455.1|	-	0.0031	17.3	0.0	0.15	11.9	0.0	3.2	3	1	1	4	4	4	1	Carboxymuconolactone	decarboxylase	family
NAD_binding_1	PF00175.16	gi|289595760|ref|YP_003482456.1|	-	8e-18	65.0	0.0	1.3e-17	64.3	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|289595760|ref|YP_003482456.1|	-	5.5e-13	48.1	4.5	1.2e-12	47.0	3.1	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.19	gi|289595760|ref|YP_003482456.1|	-	1.6e-08	34.5	0.0	2.8e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.7	gi|289595760|ref|YP_003482456.1|	-	0.071	13.0	0.0	0.64	9.9	0.0	2.1	2	0	0	2	2	2	0	Ferric	reductase	NAD	binding	domain
Fer4_18	PF13746.1	gi|289595761|ref|YP_003482457.1|	-	6e-09	36.1	11.9	6e-09	36.1	8.2	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289595761|ref|YP_003482457.1|	-	6.2e-08	32.5	10.6	6.2e-08	32.5	7.3	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289595761|ref|YP_003482457.1|	-	1.8e-06	27.5	10.0	0.0017	18.1	1.2	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289595761|ref|YP_003482457.1|	-	0.00016	21.3	15.3	0.0023	17.6	10.9	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289595761|ref|YP_003482457.1|	-	0.00046	20.4	17.3	0.013	15.7	8.1	3.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289595761|ref|YP_003482457.1|	-	0.00049	20.2	19.2	0.0011	19.2	10.4	2.8	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289595761|ref|YP_003482457.1|	-	0.0093	15.5	18.4	0.25	11.0	4.2	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|289595761|ref|YP_003482457.1|	-	0.019	14.8	23.3	0.046	13.6	3.3	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289595761|ref|YP_003482457.1|	-	0.025	14.9	19.9	0.069	13.5	11.8	2.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289595761|ref|YP_003482457.1|	-	0.028	14.7	4.0	0.028	14.7	2.8	3.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289595761|ref|YP_003482457.1|	-	0.1	12.4	15.0	0.89	9.4	0.4	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289595761|ref|YP_003482457.1|	-	0.31	11.6	9.9	9.1	6.9	1.3	3.1	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|289595761|ref|YP_003482457.1|	-	4.6	8.0	20.6	3.6	8.3	2.7	2.9	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|289595762|ref|YP_003482458.1|	-	8e-43	144.5	0.5	1.2e-42	143.9	0.3	1.3	1	0	0	1	1	1	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Pyr_redox_2	PF07992.9	gi|289595762|ref|YP_003482458.1|	-	1.7e-19	70.5	0.0	3.5e-18	66.2	0.0	3.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|289595762|ref|YP_003482458.1|	-	4.5e-12	46.2	1.2	7.1e-05	23.1	0.1	3.2	3	1	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289595762|ref|YP_003482458.1|	-	6.1e-12	46.0	0.0	8.2e-05	22.7	0.0	2.9	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|289595762|ref|YP_003482458.1|	-	1.8e-08	34.2	0.1	6.4e-08	32.5	0.0	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
NAD_binding_7	PF13241.1	gi|289595762|ref|YP_003482458.1|	-	9.7e-06	25.7	0.3	0.17	12.1	0.0	2.7	2	1	0	2	2	2	2	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|289595762|ref|YP_003482458.1|	-	2.7e-05	23.8	0.1	0.19	11.3	0.0	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Amino_oxidase	PF01593.19	gi|289595762|ref|YP_003482458.1|	-	4.5e-05	22.7	0.0	0.00094	18.3	0.0	2.1	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
DAO	PF01266.19	gi|289595762|ref|YP_003482458.1|	-	8.5e-05	21.6	0.7	0.00084	18.3	0.1	2.5	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
Shikimate_DH	PF01488.15	gi|289595762|ref|YP_003482458.1|	-	9.1e-05	22.5	0.0	0.09	12.8	0.0	3.4	3	0	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|289595762|ref|YP_003482458.1|	-	0.00012	21.3	0.3	0.48	9.5	0.0	2.7	3	0	0	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|289595762|ref|YP_003482458.1|	-	0.00017	20.8	0.3	0.00033	19.8	0.0	1.6	2	0	0	2	2	1	1	Thi4	family
FMO-like	PF00743.14	gi|289595762|ref|YP_003482458.1|	-	0.00063	18.0	0.0	0.29	9.2	0.0	2.2	2	0	0	2	2	2	2	Flavin-binding	monooxygenase-like
HI0933_like	PF03486.9	gi|289595762|ref|YP_003482458.1|	-	0.0011	17.5	1.1	0.0012	17.3	0.1	1.6	2	0	0	2	2	2	1	HI0933-like	protein
F420_oxidored	PF03807.12	gi|289595762|ref|YP_003482458.1|	-	0.0014	19.0	0.0	0.47	10.9	0.0	2.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_binding_3	PF01494.14	gi|289595762|ref|YP_003482458.1|	-	0.0016	17.5	0.0	0.0033	16.5	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|289595762|ref|YP_003482458.1|	-	0.0026	17.5	0.1	0.024	14.4	0.1	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
FAD_binding_2	PF00890.19	gi|289595762|ref|YP_003482458.1|	-	0.0028	16.5	0.1	0.0075	15.1	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
3HCDH_N	PF02737.13	gi|289595762|ref|YP_003482458.1|	-	0.011	15.3	0.1	1.4	8.4	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_9	PF13187.1	gi|289595762|ref|YP_003482458.1|	-	0.013	15.7	4.7	0.029	14.6	3.3	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
IlvN	PF07991.7	gi|289595762|ref|YP_003482458.1|	-	0.016	14.5	0.0	0.76	9.1	0.0	2.3	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
CPSase_L_chain	PF00289.17	gi|289595762|ref|YP_003482458.1|	-	0.021	14.9	0.1	4.2	7.5	0.0	2.5	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
GIDA	PF01134.17	gi|289595762|ref|YP_003482458.1|	-	0.03	13.2	0.1	0.19	10.5	0.0	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
DJ-1_PfpI	PF01965.19	gi|289595762|ref|YP_003482458.1|	-	0.041	13.3	0.0	1.5	8.2	0.0	2.7	2	1	0	3	3	3	0	DJ-1/PfpI	family
ELFV_dehydrog	PF00208.16	gi|289595762|ref|YP_003482458.1|	-	0.047	13.2	0.0	9.1	5.7	0.0	2.3	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
K_oxygenase	PF13434.1	gi|289595762|ref|YP_003482458.1|	-	0.051	12.4	0.0	2.1	7.1	0.0	2.4	3	0	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_Gly3P_dh_N	PF01210.18	gi|289595762|ref|YP_003482458.1|	-	0.058	13.1	0.0	4.6	6.9	0.0	2.4	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
XdhC_C	PF13478.1	gi|289595762|ref|YP_003482458.1|	-	0.11	12.8	0.0	3.8	7.8	0.0	2.8	2	1	1	3	3	3	0	XdhC	Rossmann	domain
ThiF	PF00899.16	gi|289595762|ref|YP_003482458.1|	-	0.13	12.0	0.5	9.1	6.1	0.0	2.5	2	0	0	2	2	2	0	ThiF	family
FAD_oxidored	PF12831.2	gi|289595762|ref|YP_003482458.1|	-	0.14	11.2	0.5	0.25	10.4	0.0	1.6	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
DHODB_Fe-S_bind	PF10418.4	gi|289595763|ref|YP_003482459.1|	-	3.6e-12	45.5	2.7	6.8e-12	44.6	1.9	1.5	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.16	gi|289595763|ref|YP_003482459.1|	-	1.2e-11	45.1	0.0	1.9e-11	44.5	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.19	gi|289595763|ref|YP_003482459.1|	-	2.9e-06	27.3	0.0	6.5e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
Fer2_3	PF13085.1	gi|289595763|ref|YP_003482459.1|	-	0.078	12.8	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
GCD14	PF08704.5	gi|289595763|ref|YP_003482459.1|	-	0.15	11.5	0.1	0.24	10.8	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DAO	PF01266.19	gi|289595764|ref|YP_003482460.1|	-	2.5e-80	270.0	0.0	2.9e-80	269.8	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|289595764|ref|YP_003482460.1|	-	2.7e-07	29.8	0.5	5.9e-06	25.3	0.3	2.1	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|289595764|ref|YP_003482460.1|	-	2.3e-06	27.4	1.3	1.7e-05	24.7	0.3	2.5	2	1	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|289595764|ref|YP_003482460.1|	-	2.3e-05	23.6	2.2	0.014	14.5	0.2	2.2	2	0	0	2	2	2	2	Thi4	family
Pyr_redox	PF00070.22	gi|289595764|ref|YP_003482460.1|	-	8.1e-05	22.9	2.0	0.052	13.9	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Phage_XkdX	PF09693.5	gi|289595764|ref|YP_003482460.1|	-	0.00015	21.2	0.3	0.005	16.3	0.0	2.6	2	0	0	2	2	2	1	Phage	uncharacterised	protein	(Phage_XkdX)
HI0933_like	PF03486.9	gi|289595764|ref|YP_003482460.1|	-	0.00028	19.4	0.7	0.25	9.7	0.2	2.1	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|289595764|ref|YP_003482460.1|	-	0.0004	19.5	0.1	0.00077	18.6	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|289595764|ref|YP_003482460.1|	-	0.0013	18.6	4.8	0.15	11.9	3.3	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|289595764|ref|YP_003482460.1|	-	0.0019	18.0	0.7	0.0051	16.6	0.1	1.9	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox_3	PF13738.1	gi|289595764|ref|YP_003482460.1|	-	0.0021	18.1	0.0	0.01	15.8	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|289595764|ref|YP_003482460.1|	-	0.017	14.5	1.5	0.038	13.3	0.2	2.0	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ThiF	PF00899.16	gi|289595764|ref|YP_003482460.1|	-	0.052	13.3	0.5	0.13	12.0	0.1	1.9	2	1	0	2	2	2	0	ThiF	family
GIDA	PF01134.17	gi|289595764|ref|YP_003482460.1|	-	0.055	12.3	0.8	2.6	6.7	0.1	2.4	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
ApbA	PF02558.11	gi|289595764|ref|YP_003482460.1|	-	0.055	12.9	1.1	0.2	11.0	0.3	2.1	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
Fer2_BFD	PF04324.10	gi|289595765|ref|YP_003482461.1|	-	9.3e-09	35.2	2.2	1.2e-08	34.8	1.5	1.2	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Fer4	PF00037.22	gi|289595766|ref|YP_003482462.1|	-	1.2e-07	31.0	17.2	2e-07	30.2	1.3	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289595766|ref|YP_003482462.1|	-	1.8e-07	30.8	23.8	5.8e-05	22.8	0.9	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289595766|ref|YP_003482462.1|	-	6e-07	29.7	11.3	1.3e-06	28.6	7.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289595766|ref|YP_003482462.1|	-	9.1e-07	28.4	14.4	1.3e-05	24.8	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|289595766|ref|YP_003482462.1|	-	4.6e-06	26.8	9.5	4.6e-06	26.8	6.6	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289595766|ref|YP_003482462.1|	-	7e-06	25.7	12.9	2.2e-05	24.2	9.0	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289595766|ref|YP_003482462.1|	-	2.1e-05	24.4	1.9	0.0016	18.4	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289595766|ref|YP_003482462.1|	-	2.7e-05	23.8	3.6	2.7e-05	23.8	2.5	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289595766|ref|YP_003482462.1|	-	5.5e-05	23.6	0.4	5.5e-05	23.6	0.3	2.8	2	2	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|289595766|ref|YP_003482462.1|	-	0.00016	21.9	5.6	0.00081	19.7	0.1	2.5	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|289595766|ref|YP_003482462.1|	-	0.00028	20.9	0.8	0.00028	20.9	0.5	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|289595766|ref|YP_003482462.1|	-	0.00041	21.0	9.5	0.36	11.5	1.2	2.5	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|289595766|ref|YP_003482462.1|	-	0.0057	17.1	17.2	0.039	14.5	3.4	2.8	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|289595766|ref|YP_003482462.1|	-	0.0081	16.5	6.8	0.1	13.0	1.5	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289595766|ref|YP_003482462.1|	-	0.02	15.2	8.5	0.026	14.8	0.5	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|289595766|ref|YP_003482462.1|	-	0.032	14.1	5.1	0.19	11.6	3.6	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
PUA	PF01472.15	gi|289595766|ref|YP_003482462.1|	-	0.04	13.6	0.0	0.073	12.8	0.0	1.4	1	0	0	1	1	1	0	PUA	domain
Fer2_4	PF13510.1	gi|289595767|ref|YP_003482463.1|	-	1.6e-27	95.1	0.0	3.8e-27	93.9	0.0	1.7	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Pyr_redox_2	PF07992.9	gi|289595767|ref|YP_003482463.1|	-	8.1e-26	91.1	0.7	7.5e-25	87.9	0.5	2.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|289595767|ref|YP_003482463.1|	-	4e-15	55.9	11.2	7.1e-07	29.5	0.8	4.3	3	1	1	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|289595767|ref|YP_003482463.1|	-	4.3e-14	52.2	15.6	2.5e-08	33.2	0.6	3.7	2	2	1	3	3	3	3	FAD	binding	domain
HI0933_like	PF03486.9	gi|289595767|ref|YP_003482463.1|	-	6e-14	51.3	14.0	5.8e-08	31.6	1.2	3.3	3	0	0	3	3	3	3	HI0933-like	protein
DAO	PF01266.19	gi|289595767|ref|YP_003482463.1|	-	3.5e-13	49.1	13.2	0.00025	20.0	0.3	3.5	3	1	0	3	3	3	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289595767|ref|YP_003482463.1|	-	2.9e-12	47.0	5.7	1.6e-08	34.9	2.3	3.3	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|289595767|ref|YP_003482463.1|	-	1.4e-11	44.1	11.0	6.8e-11	41.9	0.2	3.2	2	2	1	3	3	3	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|289595767|ref|YP_003482463.1|	-	1.8e-09	36.9	14.5	9.6e-05	21.4	0.5	4.1	3	1	0	4	4	4	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|289595767|ref|YP_003482463.1|	-	2.3e-09	37.1	5.9	0.00037	20.4	0.2	3.3	3	0	0	3	3	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|289595767|ref|YP_003482463.1|	-	1.1e-08	34.5	7.1	0.0007	18.7	0.8	3.3	3	0	0	3	3	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|289595767|ref|YP_003482463.1|	-	1.2e-07	31.0	1.6	0.00056	19.0	0.0	2.6	2	0	0	2	2	2	2	Thi4	family
NAD_binding_7	PF13241.1	gi|289595767|ref|YP_003482463.1|	-	1.5e-07	31.6	2.3	0.0043	17.2	0.1	3.3	2	1	1	3	3	3	2	Putative	NAD(P)-binding
ApbA	PF02558.11	gi|289595767|ref|YP_003482463.1|	-	7.9e-06	25.3	2.9	0.00032	20.1	0.2	3.0	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Lycopene_cycl	PF05834.7	gi|289595767|ref|YP_003482463.1|	-	0.00034	19.6	7.1	0.049	12.5	0.4	2.7	2	1	1	3	3	3	2	Lycopene	cyclase	protein
AlaDh_PNT_C	PF01262.16	gi|289595767|ref|YP_003482463.1|	-	0.0012	18.4	4.4	0.54	9.8	1.1	2.7	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|289595767|ref|YP_003482463.1|	-	0.0017	17.7	3.0	0.21	10.9	0.2	2.4	2	0	0	2	2	2	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|289595767|ref|YP_003482463.1|	-	0.0065	16.5	0.9	0.35	10.9	0.1	3.0	2	1	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|289595767|ref|YP_003482463.1|	-	0.01	15.5	1.0	1	9.1	0.1	2.4	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ELFV_dehydrog	PF00208.16	gi|289595767|ref|YP_003482463.1|	-	0.014	15.0	0.7	0.014	15.0	0.5	2.5	2	2	1	3	3	3	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
K_oxygenase	PF13434.1	gi|289595767|ref|YP_003482463.1|	-	0.016	14.1	0.3	0.07	12.0	0.0	1.9	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
2-Hacid_dh_C	PF02826.14	gi|289595767|ref|YP_003482463.1|	-	0.016	14.3	1.2	0.11	11.6	0.3	2.6	3	0	0	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Fer2_3	PF13085.1	gi|289595767|ref|YP_003482463.1|	-	0.017	14.9	0.0	0.032	14.0	0.0	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
ThiF	PF00899.16	gi|289595767|ref|YP_003482463.1|	-	0.017	14.9	2.4	0.031	14.1	1.0	1.9	2	0	0	2	2	1	0	ThiF	family
Shikimate_DH	PF01488.15	gi|289595767|ref|YP_003482463.1|	-	0.021	14.9	0.5	0.021	14.9	0.3	2.5	3	0	0	3	3	2	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.1	gi|289595767|ref|YP_003482463.1|	-	0.026	14.3	5.3	1.3	8.7	0.1	3.5	3	0	0	3	3	3	0	FAD-NAD(P)-binding
YdfZ	PF14001.1	gi|289595767|ref|YP_003482463.1|	-	0.065	13.5	0.1	0.27	11.5	0.0	2.1	2	0	0	2	2	1	0	YdfZ	protein
3HCDH_N	PF02737.13	gi|289595767|ref|YP_003482463.1|	-	0.3	10.6	6.9	0.86	9.2	0.6	2.9	3	1	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|289595767|ref|YP_003482463.1|	-	0.33	10.9	5.9	0.31	11.0	0.3	3.2	3	0	0	3	3	3	0	TrkA-N	domain
NAD_binding_10	PF13460.1	gi|289595767|ref|YP_003482463.1|	-	1.2	9.1	5.9	0.21	11.6	0.5	2.3	3	0	0	3	3	3	0	NADH(P)-binding
Trp_halogenase	PF04820.9	gi|289595767|ref|YP_003482463.1|	-	1.2	7.6	9.1	1.4	7.4	0.4	2.8	3	0	0	3	3	3	0	Tryptophan	halogenase
AdoHcyase_NAD	PF00670.16	gi|289595767|ref|YP_003482463.1|	-	3.5	7.4	6.3	1.5	8.6	0.2	3.1	4	0	0	4	4	3	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|289595767|ref|YP_003482463.1|	-	7.8	7.0	8.0	0.36	11.2	0.2	2.8	3	1	0	3	3	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
PRC	PF05239.11	gi|289595768|ref|YP_003482464.1|	-	3.9e-13	49.0	1.1	4.4e-13	48.8	0.8	1.0	1	0	0	1	1	1	1	PRC-barrel	domain
tRNA-synt_1c	PF00749.16	gi|289595769|ref|YP_003482465.1|	-	7.5e-65	218.6	0.0	7.5e-65	218.6	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|289595769|ref|YP_003482465.1|	-	1.3e-23	83.5	0.0	2.5e-23	82.6	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
Phage_integrase	PF00589.17	gi|289595770|ref|YP_003482466.1|	-	2.2e-43	147.9	2.5	3.1e-43	147.4	1.8	1.2	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|289595770|ref|YP_003482466.1|	-	1.7e-09	37.9	10.8	3.4e-09	36.8	3.5	3.4	2	2	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
DUF3895	PF13034.1	gi|289595770|ref|YP_003482466.1|	-	0.017	14.5	1.3	0.047	13.1	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3895)
DUF3435	PF11917.3	gi|289595770|ref|YP_003482466.1|	-	0.053	12.2	4.8	0.36	9.4	0.2	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3435)
NOG1	PF06858.9	gi|289595771|ref|YP_003482467.1|	-	1.5e-21	76.0	0.2	2.6e-21	75.2	0.2	1.4	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
MMR_HSR1	PF01926.18	gi|289595771|ref|YP_003482467.1|	-	1.6e-18	66.7	0.0	2.9e-18	65.9	0.0	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|289595771|ref|YP_003482467.1|	-	1.2e-10	40.9	0.0	2.5e-10	39.8	0.0	1.6	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|289595771|ref|YP_003482467.1|	-	1.9e-07	31.6	0.0	3.7e-07	30.6	0.0	1.5	1	0	0	1	1	1	1	Miro-like	protein
AIG1	PF04548.11	gi|289595771|ref|YP_003482467.1|	-	0.00077	18.6	0.0	0.0011	18.1	0.0	1.3	1	0	0	1	1	1	1	AIG1	family
SRPRB	PF09439.5	gi|289595771|ref|YP_003482467.1|	-	0.0027	16.9	0.0	0.0056	15.9	0.0	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.18	gi|289595771|ref|YP_003482467.1|	-	0.018	14.8	0.0	0.022	14.5	0.0	1.3	1	0	0	1	1	1	0	Dynamin	family
NTPase_1	PF03266.10	gi|289595771|ref|YP_003482467.1|	-	0.04	13.6	0.1	0.11	12.2	0.0	1.8	2	0	0	2	2	2	0	NTPase
KTI12	PF08433.5	gi|289595771|ref|YP_003482467.1|	-	0.11	11.7	0.1	0.89	8.7	0.0	2.1	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
tRNA-synt_1g	PF09334.6	gi|289595772|ref|YP_003482468.1|	-	3e-159	529.8	0.0	4e-159	529.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.15	gi|289595772|ref|YP_003482468.1|	-	9.2e-30	102.3	0.0	6.7e-29	99.5	0.0	2.2	2	0	0	2	2	2	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.17	gi|289595772|ref|YP_003482468.1|	-	2.1e-22	78.9	1.1	1.2e-15	56.5	0.1	3.9	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|289595772|ref|YP_003482468.1|	-	3.2e-15	56.2	1.7	5.8e-15	55.3	1.2	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|289595772|ref|YP_003482468.1|	-	1.4e-06	27.6	0.0	0.012	14.8	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
DZR	PF12773.2	gi|289595772|ref|YP_003482468.1|	-	0.00093	18.9	7.8	0.024	14.4	3.4	2.1	1	1	1	2	2	2	2	Double	zinc	ribbon
tRNA-synt_1f	PF01921.13	gi|289595772|ref|YP_003482468.1|	-	0.0071	15.0	1.4	0.0099	14.5	0.1	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
zinc_ribbon_2	PF13240.1	gi|289595772|ref|YP_003482468.1|	-	0.066	12.7	11.0	0.026	14.0	2.6	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.7	gi|289595772|ref|YP_003482468.1|	-	0.26	11.1	2.7	0.5	10.1	1.9	1.4	1	0	0	1	1	1	0	zinc-ribbons
zf-ribbon_3	PF13248.1	gi|289595772|ref|YP_003482468.1|	-	1.3	8.3	13.6	13	5.0	4.6	3.2	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF164	PF02591.10	gi|289595772|ref|YP_003482468.1|	-	1.5	8.7	5.1	21	5.0	0.0	3.2	3	0	0	3	3	3	0	Putative	zinc	ribbon	domain
PHP	PF02811.14	gi|289595773|ref|YP_003482469.1|	-	1.8e-15	57.1	1.2	5.7e-15	55.5	0.8	2.1	1	1	0	1	1	1	1	PHP	domain
PHP_C	PF13263.1	gi|289595773|ref|YP_003482469.1|	-	2e-14	52.7	0.2	5.3e-14	51.4	0.0	1.7	2	0	0	2	2	2	1	PHP-associated
Robl_LC7	PF03259.12	gi|289595774|ref|YP_003482470.1|	-	3.1e-06	26.6	0.8	3.9e-06	26.3	0.5	1.1	1	0	0	1	1	1	1	Roadblock/LC7	domain
Na_Ca_ex	PF01699.19	gi|289595775|ref|YP_003482471.1|	-	9.6e-51	171.0	38.0	3.3e-27	94.7	5.5	2.5	3	0	0	3	3	3	2	Sodium/calcium	exchanger	protein
Hjc	PF01870.13	gi|289595776|ref|YP_003482472.1|	-	3.7e-19	68.1	0.0	4.7e-19	67.7	0.0	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
RE_ScaI	PF09569.5	gi|289595776|ref|YP_003482472.1|	-	0.092	12.2	0.0	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	ScaI	restriction	endonuclease
CBS	PF00571.23	gi|289595777|ref|YP_003482473.1|	-	1.6e-26	91.7	0.5	1.3e-12	47.2	0.0	2.4	2	0	0	2	2	2	2	CBS	domain
DUF1589	PF07628.6	gi|289595777|ref|YP_003482473.1|	-	0.063	13.1	0.0	0.078	12.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1589)
TPR_12	PF13424.1	gi|289595778|ref|YP_003482474.1|	-	1.4e-24	85.8	0.0	2.4e-13	49.8	0.1	2.6	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289595778|ref|YP_003482474.1|	-	1.3e-23	82.3	0.7	2.6e-15	55.8	0.2	2.4	2	0	0	2	2	2	2	TPR	repeat
TPR_1	PF00515.23	gi|289595778|ref|YP_003482474.1|	-	9.3e-23	78.8	5.1	5.5e-09	35.2	0.9	4.2	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289595778|ref|YP_003482474.1|	-	1.6e-22	77.5	1.4	3.9e-08	32.6	0.2	4.5	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289595778|ref|YP_003482474.1|	-	5e-20	71.6	0.0	2.2e-11	44.1	0.0	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289595778|ref|YP_003482474.1|	-	3e-16	57.8	1.7	5.4e-07	28.9	0.7	4.0	3	1	1	4	4	3	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289595778|ref|YP_003482474.1|	-	3.8e-15	55.9	0.0	1e-08	35.3	0.0	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289595778|ref|YP_003482474.1|	-	1.6e-12	46.8	0.0	0.00094	19.6	0.0	4.2	1	1	3	4	4	4	3	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289595778|ref|YP_003482474.1|	-	2.1e-11	43.3	0.0	0.009	15.9	0.0	4.1	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289595778|ref|YP_003482474.1|	-	2.7e-11	42.3	0.0	0.0006	19.4	0.0	4.2	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|289595778|ref|YP_003482474.1|	-	6e-11	41.6	2.4	0.0028	17.7	0.1	5.5	5	1	0	5	5	5	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289595778|ref|YP_003482474.1|	-	5.1e-10	39.3	0.1	5.9e-08	32.7	0.0	2.6	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.1	gi|289595778|ref|YP_003482474.1|	-	6e-10	38.9	0.1	0.0021	18.3	0.0	3.6	4	0	0	4	4	3	2	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|289595778|ref|YP_003482474.1|	-	1.4e-07	30.9	0.1	0.00012	21.3	0.0	2.1	1	1	1	2	2	2	2	Coatomer	epsilon	subunit
PPR	PF01535.15	gi|289595778|ref|YP_003482474.1|	-	1.6e-06	27.6	4.4	2.1	8.5	0.2	4.5	4	0	0	4	4	4	2	PPR	repeat
Rapsyn_N	PF10579.4	gi|289595778|ref|YP_003482474.1|	-	0.0016	18.2	0.1	1.3	8.8	0.0	2.2	2	0	0	2	2	2	2	Rapsyn	N-terminal	myristoylation	and	linker	region
PPR_2	PF13041.1	gi|289595778|ref|YP_003482474.1|	-	0.0046	16.9	2.5	9.7	6.2	0.0	3.8	4	0	0	4	4	3	0	PPR	repeat	family
TPR_15	PF13429.1	gi|289595778|ref|YP_003482474.1|	-	0.0071	15.4	0.0	0.76	8.7	0.0	2.2	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289595778|ref|YP_003482474.1|	-	0.0072	16.1	0.0	0.029	14.2	0.0	2.0	2	0	0	2	2	2	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|289595778|ref|YP_003482474.1|	-	0.011	14.4	0.1	0.017	13.9	0.1	1.3	1	0	0	1	1	1	0	NMDA	receptor-regulated	protein	1
DUF4363	PF14276.1	gi|289595778|ref|YP_003482474.1|	-	0.024	14.3	0.1	0.024	14.3	0.0	2.6	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4363)
Ribosomal_S7	PF00177.16	gi|289595778|ref|YP_003482474.1|	-	0.051	13.1	2.2	0.13	11.8	1.5	1.7	1	1	1	2	2	2	0	Ribosomal	protein	S7p/S5e
TPR_4	PF07721.9	gi|289595778|ref|YP_003482474.1|	-	0.096	13.1	0.0	16	6.2	0.0	3.3	4	0	0	4	4	3	0	Tetratricopeptide	repeat
DUF4500	PF14937.1	gi|289595778|ref|YP_003482474.1|	-	0.35	10.7	4.8	0.82	9.5	0.5	3.0	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4500)
DUF3366	PF11846.3	gi|289595778|ref|YP_003482474.1|	-	0.37	10.6	0.0	0.37	10.6	0.0	2.2	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF3366)
PPR_1	PF12854.2	gi|289595778|ref|YP_003482474.1|	-	0.46	10.0	2.1	32	4.0	0.0	3.9	4	0	0	4	4	4	0	PPR	repeat
GDPD	PF03009.12	gi|289595779|ref|YP_003482475.1|	-	3.4e-36	125.0	0.1	1.3e-35	123.1	0.1	1.8	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
THF_DHG_CYH_C	PF02882.14	gi|289595780|ref|YP_003482476.1|	-	5.4e-57	191.3	1.3	7.4e-57	190.9	0.9	1.2	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.18	gi|289595780|ref|YP_003482476.1|	-	3.4e-28	98.0	1.1	4.8e-28	97.5	0.2	1.7	2	0	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
Peptidase_S13	PF02113.10	gi|289595780|ref|YP_003482476.1|	-	0.051	12.0	0.1	0.072	11.5	0.0	1.2	1	0	0	1	1	1	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
UPF0020	PF01170.13	gi|289595781|ref|YP_003482477.1|	-	1.2e-36	125.9	0.0	1.7e-36	125.4	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|289595781|ref|YP_003482477.1|	-	1.8e-11	44.0	0.0	3.4e-11	43.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|289595781|ref|YP_003482477.1|	-	1.8e-07	30.9	0.0	2e-05	24.1	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_31	PF13847.1	gi|289595781|ref|YP_003482477.1|	-	4.8e-07	29.4	0.0	7.7e-07	28.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|289595781|ref|YP_003482477.1|	-	9e-05	22.0	0.0	0.00025	20.6	0.0	1.8	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.10	gi|289595781|ref|YP_003482477.1|	-	0.00011	21.6	0.0	0.00018	20.9	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|289595781|ref|YP_003482477.1|	-	0.0002	20.7	0.0	0.0003	20.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|289595781|ref|YP_003482477.1|	-	0.00024	21.6	0.0	0.0005	20.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289595781|ref|YP_003482477.1|	-	0.0011	18.1	0.0	0.0018	17.4	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|289595781|ref|YP_003482477.1|	-	0.007	15.5	0.0	0.01	14.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
N6_Mtase	PF02384.11	gi|289595781|ref|YP_003482477.1|	-	0.02	14.0	0.0	0.038	13.0	0.0	1.4	1	1	0	1	1	1	0	N-6	DNA	Methylase
Methyltransf_25	PF13649.1	gi|289595781|ref|YP_003482477.1|	-	0.027	14.8	0.0	0.053	13.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|289595781|ref|YP_003482477.1|	-	0.051	13.0	0.0	0.15	11.4	0.0	1.7	1	1	1	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
DUF4500	PF14937.1	gi|289595782|ref|YP_003482478.1|	-	0.0019	17.9	0.1	0.0025	17.6	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4500)
T2SF	PF00482.18	gi|289595783|ref|YP_003482479.1|	-	0.0089	15.9	0.1	3.6	7.5	0.0	2.3	1	1	1	2	2	2	2	Type	II	secretion	system	(T2SS),	protein	F
Peptidase_M13_N	PF05649.8	gi|289595783|ref|YP_003482479.1|	-	0.018	14.1	0.1	0.025	13.6	0.1	1.3	1	1	0	1	1	1	0	Peptidase	family	M13
FliG_N	PF14842.1	gi|289595783|ref|YP_003482479.1|	-	0.033	14.2	3.3	0.053	13.6	0.2	2.1	2	0	0	2	2	2	0	FliG	N-terminal	domain
SecA_SW	PF07516.8	gi|289595783|ref|YP_003482479.1|	-	0.039	13.7	1.7	0.049	13.3	1.2	1.1	1	0	0	1	1	1	0	SecA	Wing	and	Scaffold	domain
Rabaptin	PF03528.10	gi|289595783|ref|YP_003482479.1|	-	0.043	13.7	3.6	0.12	12.3	1.4	2.0	1	1	1	2	2	2	0	Rabaptin
Tom22	PF04281.8	gi|289595783|ref|YP_003482479.1|	-	0.078	12.5	0.1	0.078	12.5	0.1	1.7	2	0	0	2	2	2	0	Mitochondrial	import	receptor	subunit	Tom22
Imm34	PF15596.1	gi|289595783|ref|YP_003482479.1|	-	0.11	12.6	0.0	8	6.6	0.0	2.1	2	0	0	2	2	2	0	Immunity	protein	34
E1_dh	PF00676.15	gi|289595783|ref|YP_003482479.1|	-	0.12	11.0	1.5	0.19	10.4	0.8	1.5	1	1	0	1	1	1	0	Dehydrogenase	E1	component
DUF3186	PF11382.3	gi|289595783|ref|YP_003482479.1|	-	0.14	11.3	0.2	0.17	10.9	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3186)
DLD	PF14878.1	gi|289595783|ref|YP_003482479.1|	-	0.14	12.2	1.3	13	5.9	0.1	2.1	1	1	1	2	2	2	0	Death-like	domain	of	SPT6
NTS	PF15447.1	gi|289595783|ref|YP_003482479.1|	-	0.23	11.8	1.7	2.3	8.6	0.8	2.4	2	0	0	2	2	2	0	N-terminal	segments	of	PfEMP1
HTH_5	PF01022.15	gi|289595784|ref|YP_003482480.1|	-	4.8e-05	22.9	0.1	0.00041	19.9	0.1	2.2	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Penicillinase_R	PF03965.11	gi|289595784|ref|YP_003482480.1|	-	0.00012	22.1	0.0	0.00035	20.6	0.0	1.7	2	0	0	2	2	2	1	Penicillinase	repressor
HTH_24	PF13412.1	gi|289595784|ref|YP_003482480.1|	-	0.0015	17.8	1.2	0.03	13.7	0.8	2.4	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289595784|ref|YP_003482480.1|	-	0.0044	16.7	0.1	0.014	15.1	0.1	1.9	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|289595784|ref|YP_003482480.1|	-	0.0065	15.9	0.2	0.0065	15.9	0.2	1.6	2	0	0	2	2	2	1	TFIIE	alpha	subunit
Sigma70_r4	PF04545.11	gi|289595784|ref|YP_003482480.1|	-	0.036	13.3	0.5	0.082	12.2	0.2	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_12	PF08461.5	gi|289595784|ref|YP_003482480.1|	-	0.038	13.6	0.7	0.77	9.5	0.5	2.4	1	1	1	2	2	2	0	Ribonuclease	R	winged-helix	domain
STN1_2	PF09170.5	gi|289595784|ref|YP_003482480.1|	-	0.056	13.2	0.1	0.076	12.7	0.1	1.2	1	0	0	1	1	1	0	CST,	Suppressor	of	cdc	thirteen	homolog,	complex	subunit	STN1
HTH_9	PF08221.6	gi|289595784|ref|YP_003482480.1|	-	0.087	12.7	0.0	0.23	11.3	0.0	1.8	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
GntR	PF00392.16	gi|289595784|ref|YP_003482480.1|	-	0.099	12.0	0.2	0.31	10.5	0.1	1.9	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|289595784|ref|YP_003482480.1|	-	0.1	12.4	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HxlR	PF01638.12	gi|289595784|ref|YP_003482480.1|	-	0.11	12.1	0.2	0.33	10.6	0.1	1.8	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF2551	PF10826.3	gi|289595784|ref|YP_003482480.1|	-	0.12	12.2	1.2	1.1	9.1	0.1	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2551)
Serpin	PF00079.15	gi|289595785|ref|YP_003482481.1|	-	1.3e-112	376.6	0.9	1.4e-112	376.4	0.6	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
zf-ribbon_3	PF13248.1	gi|289595786|ref|YP_003482482.1|	-	9.7e-13	46.8	13.1	1.4e-10	40.0	3.4	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289595786|ref|YP_003482482.1|	-	8e-11	41.0	20.6	1.4e-10	40.3	3.5	3.2	2	1	1	3	3	3	1	zinc-ribbon	domain
DZR	PF12773.2	gi|289595786|ref|YP_003482482.1|	-	5.2e-09	35.7	4.6	2.9e-08	33.3	3.2	2.0	1	1	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|289595786|ref|YP_003482482.1|	-	1.6e-07	30.8	18.7	3.6e-07	29.7	1.1	3.2	3	0	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|289595786|ref|YP_003482482.1|	-	5.7e-06	25.5	11.0	3e-05	23.2	0.5	4.3	4	1	0	4	4	4	1	TFIIB	zinc-binding
NMD3	PF04981.8	gi|289595786|ref|YP_003482482.1|	-	0.00017	20.8	1.2	0.0058	15.7	0.8	2.3	1	1	0	1	1	1	1	NMD3	family
Zn-ribbon_8	PF09723.5	gi|289595786|ref|YP_003482482.1|	-	0.00019	21.3	5.5	0.098	12.6	0.0	3.3	2	1	0	2	2	2	1	Zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|289595786|ref|YP_003482482.1|	-	0.00025	20.6	12.4	0.4	10.4	0.1	3.6	2	1	1	3	3	3	2	Nudix	N-terminal
zf-IS66	PF13005.2	gi|289595786|ref|YP_003482482.1|	-	0.0044	16.9	5.0	4.3	7.3	0.1	4.2	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
DUF2296	PF10058.4	gi|289595786|ref|YP_003482482.1|	-	0.0048	16.6	0.2	0.0048	16.6	0.2	3.0	1	1	2	3	3	3	1	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-C3HC4_3	PF13920.1	gi|289595786|ref|YP_003482482.1|	-	0.02	14.5	0.3	0.02	14.5	0.2	2.3	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-TFIIB	PF13453.1	gi|289595786|ref|YP_003482482.1|	-	0.029	13.5	5.4	0.75	9.0	0.8	3.1	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
zf-C4H2	PF10146.4	gi|289595786|ref|YP_003482482.1|	-	0.038	14.0	0.8	0.088	12.8	0.5	1.6	1	0	0	1	1	1	0	Zinc	finger-containing	protein
DUF329	PF03884.9	gi|289595786|ref|YP_003482482.1|	-	0.071	12.6	1.4	0.071	12.6	1.0	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF329)
HypA	PF01155.14	gi|289595786|ref|YP_003482482.1|	-	0.1	12.2	2.6	2.9	7.5	0.0	2.5	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-RING_3	PF14369.1	gi|289595786|ref|YP_003482482.1|	-	0.12	12.3	12.7	2	8.4	0.0	4.2	3	1	1	4	4	4	0	zinc-finger
zf-SNAP50_C	PF12251.3	gi|289595786|ref|YP_003482482.1|	-	0.21	10.9	2.8	0.17	11.2	1.0	1.6	1	1	0	1	1	1	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
OrfB_Zn_ribbon	PF07282.6	gi|289595786|ref|YP_003482482.1|	-	0.24	11.0	5.9	2	8.1	0.6	3.1	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
zf-NADH-PPase	PF09297.6	gi|289595786|ref|YP_003482482.1|	-	0.39	10.2	16.3	0.24	10.9	0.3	3.6	3	1	1	4	4	4	0	NADH	pyrophosphatase	zinc	ribbon	domain
GATA	PF00320.22	gi|289595786|ref|YP_003482482.1|	-	0.4	10.0	0.1	0.4	10.0	0.1	2.5	3	0	0	3	3	2	0	GATA	zinc	finger
YhfH	PF14149.1	gi|289595786|ref|YP_003482482.1|	-	0.47	10.2	6.0	10	6.0	0.2	3.8	3	1	1	4	4	4	0	YhfH-like	protein
DUF2115	PF09888.4	gi|289595786|ref|YP_003482482.1|	-	0.56	10.2	3.5	1.5	8.9	0.0	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Cys_rich_CPXG	PF14255.1	gi|289595786|ref|YP_003482482.1|	-	0.58	10.0	14.9	12	5.8	0.0	4.3	4	0	0	4	4	4	0	Cysteine-rich	CPXCG
DNA_ligase_ZBD	PF03119.11	gi|289595786|ref|YP_003482482.1|	-	0.99	9.1	7.9	5.5	6.7	0.1	3.2	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ISL3	PF14690.1	gi|289595786|ref|YP_003482482.1|	-	1.2	9.2	14.4	27	4.8	1.1	4.3	3	2	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Prok-RING_1	PF14446.1	gi|289595786|ref|YP_003482482.1|	-	1.8	8.3	9.0	0.25	11.1	0.4	2.6	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF2072	PF09845.4	gi|289595786|ref|YP_003482482.1|	-	1.8	8.4	5.5	15	5.5	0.8	2.5	1	1	0	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
Prok-RING_4	PF14447.1	gi|289595786|ref|YP_003482482.1|	-	2.1	7.9	8.5	0.82	9.2	0.1	3.1	3	1	1	4	4	4	0	Prokaryotic	RING	finger	family	4
zf-tcix	PF14952.1	gi|289595786|ref|YP_003482482.1|	-	3.5	7.0	9.0	22	4.4	1.5	3.2	2	1	1	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Rubredoxin	PF00301.15	gi|289595786|ref|YP_003482482.1|	-	4.2	7.3	15.7	8.5	6.3	0.4	4.0	3	1	1	4	4	4	0	Rubredoxin
zinc-ribbons_6	PF07191.7	gi|289595786|ref|YP_003482482.1|	-	4.2	7.2	6.8	30	4.5	4.8	2.3	1	1	0	1	1	1	0	zinc-ribbons
Elf1	PF05129.8	gi|289595786|ref|YP_003482482.1|	-	6.1	6.6	5.8	1.8	8.2	0.0	2.8	1	1	2	3	3	3	0	Transcription	elongation	factor	Elf1	like
zf-C4_Topoisom	PF01396.14	gi|289595786|ref|YP_003482482.1|	-	7.3	6.1	11.4	5.2	6.6	0.3	3.9	3	1	1	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
A2L_zn_ribbon	PF08792.5	gi|289595786|ref|YP_003482482.1|	-	7.8	6.0	11.9	8.8	5.9	0.2	3.6	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
Prim_Zn_Ribbon	PF08273.7	gi|289595786|ref|YP_003482482.1|	-	8	6.6	14.0	14	5.8	2.0	3.7	3	1	0	3	3	3	0	Zinc-binding	domain	of	primase-helicase
DUF164	PF02591.10	gi|289595786|ref|YP_003482482.1|	-	8.9	6.2	9.3	31	4.4	0.0	3.7	3	1	1	4	4	4	0	Putative	zinc	ribbon	domain
zf-P11	PF03854.9	gi|289595786|ref|YP_003482482.1|	-	9.8	5.7	7.4	2.3	7.7	0.2	2.5	2	1	0	2	2	2	0	P-11	zinc	finger
Nop	PF01798.13	gi|289595787|ref|YP_003482483.1|	-	1.3e-47	160.8	0.2	1.9e-47	160.2	0.1	1.2	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
HSP9_HSP12	PF04119.7	gi|289595787|ref|YP_003482483.1|	-	0.12	12.4	0.1	0.5	10.4	0.0	2.0	2	0	0	2	2	2	0	Heat	shock	protein	9/12
MoaE	PF02391.12	gi|289595788|ref|YP_003482484.1|	-	1.3e-25	89.5	0.1	1.6e-25	89.1	0.1	1.0	1	0	0	1	1	1	1	MoaE	protein
OsmC	PF02566.14	gi|289595789|ref|YP_003482485.1|	-	5.8e-19	68.1	0.0	7.4e-19	67.8	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
ThiF	PF00899.16	gi|289595790|ref|YP_003482486.1|	-	3.5e-42	143.4	0.8	5e-42	142.9	0.6	1.2	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|289595790|ref|YP_003482486.1|	-	7.4e-07	28.6	0.3	1.3e-06	27.8	0.0	1.6	2	0	0	2	2	2	1	MoeZ/MoeB	domain
MAF_flag10	PF01973.13	gi|289595790|ref|YP_003482486.1|	-	0.017	14.6	0.4	0.41	10.1	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF115
NSs	PF11073.3	gi|289595790|ref|YP_003482486.1|	-	0.033	13.4	0.1	0.04	13.1	0.0	1.2	1	0	0	1	1	1	0	Rift	valley	fever	virus	non	structural	protein	(NSs)	like
ThiS	PF02597.15	gi|289595791|ref|YP_003482487.1|	-	3e-10	40.3	0.0	3.7e-10	40.0	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
Ub-Mut7C	PF14451.1	gi|289595791|ref|YP_003482487.1|	-	0.043	13.3	0.0	0.13	11.8	0.0	1.7	1	1	0	1	1	1	0	Mut7-C	ubiquitin
Peptidase_M24	PF00557.19	gi|289595792|ref|YP_003482488.1|	-	7.1e-28	97.5	0.6	9.5e-28	97.1	0.4	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|289595792|ref|YP_003482488.1|	-	1.1e-17	64.7	0.6	4.5e-17	62.7	0.1	2.1	2	1	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
AHSP	PF09236.5	gi|289595792|ref|YP_003482488.1|	-	0.016	15.4	0.1	0.046	13.9	0.1	1.8	1	0	0	1	1	1	0	Alpha-haemoglobin	stabilising	protein
DUF438	PF04282.8	gi|289595793|ref|YP_003482489.1|	-	3.2e-26	90.9	4.6	7.1e-26	89.8	1.4	2.5	2	0	0	2	2	2	1	Family	of	unknown	function	(DUF438)
PAS_10	PF13596.1	gi|289595793|ref|YP_003482489.1|	-	1.2e-25	89.7	0.1	1.2e-24	86.6	0.0	2.3	2	0	0	2	2	2	1	PAS	domain
Hemerythrin	PF01814.18	gi|289595793|ref|YP_003482489.1|	-	1.5e-14	54.3	0.3	3.9e-14	52.9	0.0	1.9	2	0	0	2	2	2	1	Hemerythrin	HHE	cation	binding	domain
Flu_B_M2	PF04772.7	gi|289595793|ref|YP_003482489.1|	-	0.14	12.2	1.5	0.25	11.3	0.5	1.8	2	0	0	2	2	2	0	Influenza	B	matrix	protein	2	(BM2)
TMP-TENI	PF02581.12	gi|289595794|ref|YP_003482490.1|	-	1.7e-61	206.5	1.6	1.9e-61	206.3	1.1	1.0	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase/TENI
NMO	PF03060.10	gi|289595794|ref|YP_003482490.1|	-	2.9e-05	23.3	1.7	5.6e-05	22.4	1.2	1.4	1	1	0	1	1	1	1	Nitronate	monooxygenase
QRPTase_C	PF01729.14	gi|289595794|ref|YP_003482490.1|	-	0.00037	20.0	1.6	0.0012	18.4	0.2	2.0	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
NanE	PF04131.9	gi|289595794|ref|YP_003482490.1|	-	0.00072	18.5	0.5	0.0017	17.3	0.2	1.7	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.16	gi|289595794|ref|YP_003482490.1|	-	0.00077	18.7	0.9	0.0033	16.7	0.1	2.1	2	1	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|289595794|ref|YP_003482490.1|	-	0.002	17.2	0.3	0.0044	16.1	0.2	1.6	1	1	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|289595794|ref|YP_003482490.1|	-	0.033	13.4	2.2	0.22	10.7	0.1	2.5	1	1	1	3	3	3	0	PcrB	family
DUF561	PF04481.7	gi|289595794|ref|YP_003482490.1|	-	0.035	13.0	1.0	0.07	12.0	0.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
Ribul_P_3_epim	PF00834.14	gi|289595794|ref|YP_003482490.1|	-	0.05	12.7	0.7	0.34	9.9	0.2	2.2	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
FlpD	PF02662.11	gi|289595794|ref|YP_003482490.1|	-	0.089	12.4	0.1	0.17	11.5	0.1	1.5	1	0	0	1	1	1	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
OKR_DC_1	PF01276.15	gi|289595795|ref|YP_003482491.1|	-	2.8e-56	190.8	0.4	2.1e-54	184.6	0.2	2.1	1	1	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	major	domain
OKR_DC_1_C	PF03711.10	gi|289595795|ref|YP_003482491.1|	-	1.1e-10	41.6	0.1	2.1e-10	40.7	0.0	1.4	1	0	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	C-terminal	domain
Aminotran_1_2	PF00155.16	gi|289595795|ref|YP_003482491.1|	-	1.6e-06	27.3	0.0	2.5e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|289595795|ref|YP_003482491.1|	-	0.00011	21.1	0.0	0.00017	20.4	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|289595795|ref|YP_003482491.1|	-	0.0011	18.1	0.0	0.0043	16.2	0.0	1.8	2	0	0	2	2	2	1	Beta-eliminating	lyase
Met_gamma_lyase	PF06838.6	gi|289595795|ref|YP_003482491.1|	-	0.0064	14.8	0.0	0.0095	14.2	0.0	1.2	1	0	0	1	1	1	1	Methionine	gamma-lyase
DUF556	PF04476.8	gi|289595795|ref|YP_003482491.1|	-	0.077	12.1	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF556)
DUF59	PF01883.14	gi|289595796|ref|YP_003482492.1|	-	3.3e-22	78.2	0.1	4.1e-22	77.9	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
UDG	PF03167.14	gi|289595797|ref|YP_003482493.1|	-	2.6e-41	140.5	0.0	3.5e-41	140.1	0.0	1.2	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
PAS_9	PF13426.1	gi|289595798|ref|YP_003482494.1|	-	2.8e-117	384.3	3.8	1.4e-23	83.2	0.0	7.4	7	0	0	7	7	7	7	PAS	domain
PAS	PF00989.19	gi|289595798|ref|YP_003482494.1|	-	1.3e-95	314.8	0.2	3.4e-19	68.6	0.0	7.3	7	0	0	7	7	7	6	PAS	fold
PAS_4	PF08448.5	gi|289595798|ref|YP_003482494.1|	-	1.6e-68	227.6	0.0	4.6e-14	52.3	0.0	7.4	7	0	0	7	7	7	7	PAS	fold
PAS_8	PF13188.1	gi|289595798|ref|YP_003482494.1|	-	3.3e-53	175.8	0.9	2.8e-08	33.3	0.0	7.6	7	0	0	7	7	7	6	PAS	domain
PAS_3	PF08447.6	gi|289595798|ref|YP_003482494.1|	-	2.5e-52	174.9	0.0	7.8e-10	38.7	0.0	6.9	6	0	0	6	6	6	6	PAS	fold
GAF_2	PF13185.1	gi|289595798|ref|YP_003482494.1|	-	7.9e-42	143.2	0.0	1.7e-13	51.3	0.0	4.5	4	0	0	4	4	4	3	GAF	domain
GAF_3	PF13492.1	gi|289595798|ref|YP_003482494.1|	-	4e-39	133.6	0.0	1.1e-12	48.1	0.0	4.6	5	0	0	5	5	5	3	GAF	domain
GAF	PF01590.21	gi|289595798|ref|YP_003482494.1|	-	4.6e-27	95.0	0.0	1.8e-11	44.3	0.0	3.5	3	0	0	3	3	3	3	GAF	domain
HATPase_c	PF02518.21	gi|289595798|ref|YP_003482494.1|	-	8.7e-24	83.3	2.4	1.4e-23	82.7	0.0	2.6	3	0	0	3	3	3	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.1	gi|289595798|ref|YP_003482494.1|	-	3.5e-17	62.5	0.9	4.8e-08	33.2	0.0	5.3	6	0	0	6	6	6	2	PAS	domain
PAS_7	PF12860.2	gi|289595798|ref|YP_003482494.1|	-	1.8e-10	40.8	1.0	0.21	11.5	0.0	7.3	7	2	0	7	7	7	3	PAS	fold
HisKA	PF00512.20	gi|289595798|ref|YP_003482494.1|	-	6.7e-09	35.6	0.0	3.4e-08	33.3	0.0	2.3	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_11	PF14598.1	gi|289595798|ref|YP_003482494.1|	-	1e-08	35.1	0.0	2.7	7.9	0.0	6.7	7	1	0	7	7	7	2	PAS	domain
HATPase_c_3	PF13589.1	gi|289595798|ref|YP_003482494.1|	-	2.2e-05	24.1	2.5	2.5e-05	23.9	0.1	2.2	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_2	PF13581.1	gi|289595798|ref|YP_003482494.1|	-	3.7e-05	23.4	0.0	0.00017	21.3	0.0	2.1	2	0	0	2	2	2	1	Histidine	kinase-like	ATPase	domain
HATPase_c_5	PF14501.1	gi|289595798|ref|YP_003482494.1|	-	8.3e-05	22.2	0.1	0.00035	20.2	0.1	2.1	1	0	0	1	1	1	1	GHKL	domain
DUF3369	PF11849.3	gi|289595798|ref|YP_003482494.1|	-	0.00021	21.2	2.1	0.21	11.4	0.0	4.2	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF3369)
MEKHLA	PF08670.6	gi|289595798|ref|YP_003482494.1|	-	0.00044	19.8	0.0	0.97	8.9	0.0	3.4	3	0	0	3	3	3	2	MEKHLA	domain
DUF2111	PF09884.4	gi|289595798|ref|YP_003482494.1|	-	0.0056	16.4	0.3	0.8	9.5	0.0	3.7	3	0	0	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
DUF484	PF04340.7	gi|289595798|ref|YP_003482494.1|	-	0.036	13.5	0.0	3.6	7.0	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF484
Cytadhesin_P30	PF07271.6	gi|289595798|ref|YP_003482494.1|	-	0.65	9.2	0.1	1.2	8.3	0.1	1.3	1	0	0	1	1	1	0	Cytadhesin	P30/P32
Met_10	PF02475.11	gi|289595799|ref|YP_003482495.1|	-	2.7e-63	213.1	0.6	3.6e-63	212.7	0.4	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|289595799|ref|YP_003482495.1|	-	2.3e-09	36.8	0.0	3.8e-09	36.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|289595799|ref|YP_003482495.1|	-	4.7e-09	36.0	0.7	2.4e-07	30.4	0.1	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
PrmA	PF06325.8	gi|289595799|ref|YP_003482495.1|	-	5.4e-09	35.5	0.0	7.8e-09	35.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_26	PF13659.1	gi|289595799|ref|YP_003482495.1|	-	7.9e-07	29.1	0.0	1.3e-06	28.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289595799|ref|YP_003482495.1|	-	1.6e-06	28.6	0.0	5e-06	27.0	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|289595799|ref|YP_003482495.1|	-	3.5e-06	26.6	0.0	6.6e-06	25.7	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TRM	PF02005.11	gi|289595799|ref|YP_003482495.1|	-	1.1e-05	24.5	0.0	1.5e-05	24.1	0.0	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
DNA_methylase	PF00145.12	gi|289595799|ref|YP_003482495.1|	-	0.00019	20.6	0.4	0.00093	18.4	0.0	1.9	2	0	0	2	2	2	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_16	PF10294.4	gi|289595799|ref|YP_003482495.1|	-	0.003	17.0	0.0	0.0052	16.2	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
PRMT5	PF05185.11	gi|289595799|ref|YP_003482495.1|	-	0.0041	16.0	0.0	0.031	13.2	0.0	1.9	2	0	0	2	2	2	1	PRMT5	arginine-N-methyltransferase
MethyltransfD12	PF02086.10	gi|289595799|ref|YP_003482495.1|	-	0.0044	16.5	0.2	0.0086	15.5	0.0	1.6	2	0	0	2	2	2	1	D12	class	N6	adenine-specific	DNA	methyltransferase
UPF0020	PF01170.13	gi|289595799|ref|YP_003482495.1|	-	0.0066	16.0	0.0	0.014	14.9	0.0	1.5	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
tRNA_U5-meth_tr	PF05958.6	gi|289595799|ref|YP_003482495.1|	-	0.017	13.8	0.0	0.021	13.5	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_25	PF13649.1	gi|289595799|ref|YP_003482495.1|	-	0.021	15.1	0.0	0.049	13.9	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|289595799|ref|YP_003482495.1|	-	0.04	12.9	0.0	0.074	12.1	0.0	1.4	1	0	0	1	1	1	0	N-6	DNA	Methylase
Cons_hypoth95	PF03602.10	gi|289595799|ref|YP_003482495.1|	-	0.054	12.8	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_12	PF08242.7	gi|289595799|ref|YP_003482495.1|	-	0.074	13.5	0.0	0.29	11.6	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	domain
FmrO	PF07091.6	gi|289595799|ref|YP_003482495.1|	-	0.076	11.9	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Nol1_Nop2_Fmu	PF01189.12	gi|289595799|ref|YP_003482495.1|	-	0.085	12.2	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	NOL1/NOP2/sun	family
Methyltransf_11	PF08241.7	gi|289595799|ref|YP_003482495.1|	-	0.13	12.7	0.0	0.28	11.6	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Beta-Casp	PF10996.3	gi|289595800|ref|YP_003482496.1|	-	3e-35	120.8	0.0	8.6e-35	119.4	0.0	1.8	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|289595800|ref|YP_003482496.1|	-	6.2e-22	78.1	0.8	1.2e-21	77.2	0.6	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|289595800|ref|YP_003482496.1|	-	5.5e-14	51.7	0.1	2.2e-13	49.8	0.0	2.1	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|289595800|ref|YP_003482496.1|	-	1.1e-09	38.1	0.2	3.3e-09	36.5	0.1	1.8	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|289595800|ref|YP_003482496.1|	-	2.4e-05	23.7	0.2	0.0001	21.8	0.1	2.1	1	0	0	1	1	1	1	KH	domain
Tap-RNA_bind	PF09162.5	gi|289595800|ref|YP_003482496.1|	-	0.016	14.7	0.0	0.046	13.2	0.0	1.7	1	0	0	1	1	1	0	Tap,	RNA-binding
Lactamase_B_3	PF13483.1	gi|289595800|ref|YP_003482496.1|	-	0.037	13.7	0.0	0.071	12.8	0.0	1.5	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Proteasome	PF00227.21	gi|289595801|ref|YP_003482497.1|	-	8.3e-53	178.5	0.7	9.6e-53	178.2	0.5	1.0	1	0	0	1	1	1	1	Proteasome	subunit
DUF3650	PF12368.3	gi|289595801|ref|YP_003482497.1|	-	0.091	12.2	0.2	0.15	11.5	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3650)
ABC-3	PF00950.12	gi|289595802|ref|YP_003482498.1|	-	9.1e-47	159.5	40.9	1.1e-46	159.2	28.3	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|289595802|ref|YP_003482498.1|	-	9.2e-05	21.4	33.4	9.2e-05	21.4	23.2	1.6	1	1	0	2	2	2	1	FecCD	transport	family
DUF1440	PF07274.7	gi|289595802|ref|YP_003482498.1|	-	0.069	13.1	1.0	0.23	11.4	0.7	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1440)
DUF3481	PF11980.3	gi|289595802|ref|YP_003482498.1|	-	2	8.2	6.7	0.4	10.5	1.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3481)
ABC_tran	PF00005.22	gi|289595803|ref|YP_003482499.1|	-	1.2e-29	103.3	0.0	1.7e-29	102.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289595803|ref|YP_003482499.1|	-	2.3e-12	47.4	0.2	1e-10	42.0	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|289595803|ref|YP_003482499.1|	-	1.7e-08	33.9	0.2	4.3e-06	26.1	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|289595803|ref|YP_003482499.1|	-	4.4e-08	32.6	0.7	0.00014	21.0	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|289595803|ref|YP_003482499.1|	-	2.7e-06	27.8	0.1	6.2e-06	26.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|289595803|ref|YP_003482499.1|	-	4.5e-06	26.5	0.8	2.1e-05	24.3	0.6	2.0	1	1	0	1	1	1	1	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|289595803|ref|YP_003482499.1|	-	0.00023	20.3	0.1	0.00082	18.5	0.0	1.8	2	0	0	2	2	2	1	Zeta	toxin
AAA_13	PF13166.1	gi|289595803|ref|YP_003482499.1|	-	0.00035	19.1	0.0	0.37	9.2	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|289595803|ref|YP_003482499.1|	-	0.00043	19.5	0.0	0.00075	18.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|289595803|ref|YP_003482499.1|	-	0.00068	19.6	0.1	0.0032	17.4	0.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|289595803|ref|YP_003482499.1|	-	0.00084	19.2	0.1	0.0096	15.8	0.1	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
T2SE	PF00437.15	gi|289595803|ref|YP_003482499.1|	-	0.00096	18.1	0.1	0.0068	15.3	0.0	2.0	2	1	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|289595803|ref|YP_003482499.1|	-	0.002	18.2	0.1	0.012	15.7	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|289595803|ref|YP_003482499.1|	-	0.0038	16.7	0.3	0.0079	15.6	0.2	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|289595803|ref|YP_003482499.1|	-	0.0056	16.1	0.1	0.015	14.7	0.1	2.0	1	1	0	1	1	1	1	AAA-like	domain
AAA_14	PF13173.1	gi|289595803|ref|YP_003482499.1|	-	0.0075	16.1	0.2	0.09	12.6	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|289595803|ref|YP_003482499.1|	-	0.0077	15.7	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|289595803|ref|YP_003482499.1|	-	0.008	15.9	0.0	0.018	14.8	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
NACHT	PF05729.7	gi|289595803|ref|YP_003482499.1|	-	0.0088	15.7	0.4	0.017	14.7	0.1	1.6	2	0	0	2	2	1	1	NACHT	domain
UPF0079	PF02367.12	gi|289595803|ref|YP_003482499.1|	-	0.013	15.1	0.1	0.025	14.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_30	PF13604.1	gi|289595803|ref|YP_003482499.1|	-	0.013	15.0	0.0	0.03	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MutS_V	PF00488.16	gi|289595803|ref|YP_003482499.1|	-	0.018	14.4	0.0	0.039	13.3	0.0	1.5	1	0	0	1	1	1	0	MutS	domain	V
Adeno_IVa2	PF02456.10	gi|289595803|ref|YP_003482499.1|	-	0.021	13.4	0.1	0.052	12.1	0.0	1.6	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
NB-ARC	PF00931.17	gi|289595803|ref|YP_003482499.1|	-	0.023	13.5	1.3	0.24	10.1	0.0	2.2	2	1	1	3	3	3	0	NB-ARC	domain
ABC_ATPase	PF09818.4	gi|289595803|ref|YP_003482499.1|	-	0.027	13.0	0.3	3	6.3	0.1	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
MMR_HSR1	PF01926.18	gi|289595803|ref|YP_003482499.1|	-	0.037	13.9	0.3	0.084	12.8	0.2	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
NTPase_1	PF03266.10	gi|289595803|ref|YP_003482499.1|	-	0.043	13.5	0.3	0.15	11.7	0.0	2.0	2	0	0	2	2	2	0	NTPase
Pox_A32	PF04665.7	gi|289595803|ref|YP_003482499.1|	-	0.057	12.7	0.3	0.2	10.9	0.0	1.8	2	0	0	2	2	2	0	Poxvirus	A32	protein
AFG1_ATPase	PF03969.11	gi|289595803|ref|YP_003482499.1|	-	0.068	11.9	0.1	1.3	7.7	0.0	2.1	2	0	0	2	2	2	0	AFG1-like	ATPase
AAA_24	PF13479.1	gi|289595803|ref|YP_003482499.1|	-	0.069	12.7	0.5	0.12	11.9	0.1	1.6	2	0	0	2	2	1	0	AAA	domain
AAA_33	PF13671.1	gi|289595803|ref|YP_003482499.1|	-	0.073	12.9	0.0	0.16	11.8	0.0	1.5	2	0	0	2	2	1	0	AAA	domain
AAA	PF00004.24	gi|289595803|ref|YP_003482499.1|	-	0.083	13.0	1.4	0.32	11.1	1.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|289595803|ref|YP_003482499.1|	-	0.089	12.1	0.0	0.2	11.0	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|289595803|ref|YP_003482499.1|	-	0.094	13.2	0.1	0.33	11.4	0.0	1.9	2	1	0	2	2	2	0	Miro-like	protein
AAA_28	PF13521.1	gi|289595803|ref|YP_003482499.1|	-	0.11	12.3	0.0	0.23	11.3	0.0	1.5	2	0	0	2	2	1	0	AAA	domain
AAA_5	PF07728.9	gi|289595803|ref|YP_003482499.1|	-	0.13	12.0	0.3	0.84	9.3	0.1	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Fe_dep_repr_C	PF02742.10	gi|289595804|ref|YP_003482500.1|	-	1.5e-19	69.4	0.0	2.1e-19	68.9	0.0	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|289595804|ref|YP_003482500.1|	-	4.4e-10	39.3	0.2	9.3e-10	38.3	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.14	gi|289595804|ref|YP_003482500.1|	-	2.9e-05	23.6	0.1	5.2e-05	22.8	0.0	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|289595804|ref|YP_003482500.1|	-	0.00028	20.6	0.2	0.00039	20.1	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR	PF01047.17	gi|289595804|ref|YP_003482500.1|	-	0.003	17.2	0.0	0.0062	16.2	0.0	1.6	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|289595804|ref|YP_003482500.1|	-	0.026	14.8	0.0	0.047	14.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|289595804|ref|YP_003482500.1|	-	0.054	13.0	0.0	0.21	11.2	0.0	2.0	3	0	0	3	3	3	0	IclR	helix-turn-helix	domain
GntR	PF00392.16	gi|289595804|ref|YP_003482500.1|	-	0.12	11.8	0.0	0.25	10.8	0.0	1.6	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
PLDc_2	PF13091.1	gi|289595805|ref|YP_003482501.1|	-	8.5e-37	125.7	2.3	6.5e-24	84.0	0.0	2.2	2	0	0	2	2	2	2	PLD-like	domain
Regulator_TrmB	PF11495.3	gi|289595805|ref|YP_003482501.1|	-	4e-16	58.7	1.6	1.1e-10	40.8	0.0	2.5	2	1	0	2	2	2	2	Archaeal	transcriptional	regulator	TrmB
PLDc	PF00614.17	gi|289595805|ref|YP_003482501.1|	-	2.4e-11	43.0	3.2	5.1e-06	26.1	0.1	2.7	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
DUF1669	PF07894.7	gi|289595805|ref|YP_003482501.1|	-	0.00011	21.4	1.2	0.08	12.1	0.1	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1669)
MCM_N	PF14551.1	gi|289595805|ref|YP_003482501.1|	-	0.00078	19.9	0.2	2.2	8.7	0.0	2.4	2	0	0	2	2	2	2	MCM	N-terminal	domain
PQQ_3	PF13570.1	gi|289595805|ref|YP_003482501.1|	-	0.0052	17.0	1.6	3.9	7.8	0.1	3.1	3	0	0	3	3	3	2	PQQ-like	domain
GPI-anchored	PF10342.4	gi|289595805|ref|YP_003482501.1|	-	0.13	12.7	7.0	1.1	9.8	0.1	3.6	3	1	0	3	3	3	0	Ser-Thr-rich	glycosyl-phosphatidyl-inositol-anchored	membrane	family
Aconitase_C	PF00694.14	gi|289595806|ref|YP_003482502.1|	-	1.9e-19	70.0	0.0	2.5e-19	69.6	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|289595806|ref|YP_003482502.1|	-	0.00029	20.3	0.2	0.018	14.4	0.2	2.2	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.15	gi|289595807|ref|YP_003482503.1|	-	5.8e-88	295.4	2.2	3.7e-58	197.1	0.2	2.1	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|289595807|ref|YP_003482503.1|	-	0.0009	17.8	0.0	0.0014	17.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Oxidored_FMN	PF00724.15	gi|289595807|ref|YP_003482503.1|	-	0.039	12.9	0.0	0.072	12.0	0.0	1.3	1	0	0	1	1	1	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
UPF0278	PF08745.6	gi|289595808|ref|YP_003482504.1|	-	1.7e-06	27.4	0.4	7.1e-05	22.1	0.0	2.4	2	1	0	2	2	2	1	UPF0278	family
PIN	PF01850.16	gi|289595808|ref|YP_003482504.1|	-	1.7e-05	25.1	0.1	0.00025	21.3	0.1	2.0	1	1	1	2	2	2	1	PIN	domain
NOB1_Zn_bind	PF08772.6	gi|289595808|ref|YP_003482504.1|	-	0.0037	17.0	2.6	0.0067	16.2	1.8	1.4	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF1272	PF06906.6	gi|289595808|ref|YP_003482504.1|	-	0.012	15.4	0.4	0.02	14.7	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
PIN_2	PF10130.4	gi|289595808|ref|YP_003482504.1|	-	0.021	14.8	0.0	0.027	14.5	0.0	1.4	1	0	0	1	1	1	0	PIN	domain
SprT-like	PF10263.4	gi|289595808|ref|YP_003482504.1|	-	0.045	13.4	3.2	0.059	13.0	2.0	1.5	1	1	0	1	1	1	0	SprT-like	family
zf-IS66	PF13005.2	gi|289595808|ref|YP_003482504.1|	-	0.063	13.2	3.3	0.18	11.8	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
HypA	PF01155.14	gi|289595808|ref|YP_003482504.1|	-	0.076	12.7	0.6	0.11	12.1	0.4	1.5	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc-ribbons_6	PF07191.7	gi|289595808|ref|YP_003482504.1|	-	0.097	12.4	0.5	0.16	11.7	0.4	1.3	1	0	0	1	1	1	0	zinc-ribbons
DNA_ligase_ZBD	PF03119.11	gi|289595808|ref|YP_003482504.1|	-	0.1	12.3	1.9	0.16	11.7	0.3	2.1	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.2	gi|289595808|ref|YP_003482504.1|	-	0.1	12.4	0.7	0.18	11.6	0.5	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF4411	PF14367.1	gi|289595808|ref|YP_003482504.1|	-	0.1	12.2	0.2	0.24	11.1	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4411)
DUF2597	PF10772.4	gi|289595808|ref|YP_003482504.1|	-	0.11	12.4	0.0	0.14	12.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2597)
Zn-ribbon_8	PF09723.5	gi|289595808|ref|YP_003482504.1|	-	0.22	11.4	5.6	4.6	7.2	3.9	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF35_N	PF12172.3	gi|289595808|ref|YP_003482504.1|	-	0.23	11.4	2.7	0.48	10.4	1.8	1.4	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-H2C2_2	PF13465.1	gi|289595808|ref|YP_003482504.1|	-	0.38	11.1	2.7	2	8.8	0.2	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
OrfB_Zn_ribbon	PF07282.6	gi|289595808|ref|YP_003482504.1|	-	0.93	9.2	4.2	11	5.7	0.4	2.3	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C2H2	PF00096.21	gi|289595808|ref|YP_003482504.1|	-	1.1	9.7	4.7	3.6	8.1	0.8	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
ADK_lid	PF05191.9	gi|289595808|ref|YP_003482504.1|	-	1.4	8.6	4.5	4.1	7.1	3.1	1.7	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
Mut7-C	PF01927.11	gi|289595808|ref|YP_003482504.1|	-	2.4	8.1	4.6	3.8	7.4	0.6	2.5	1	1	2	3	3	3	0	Mut7-C	RNAse	domain
zf-NADH-PPase	PF09297.6	gi|289595808|ref|YP_003482504.1|	-	2.5	7.6	8.2	4.1	7.0	0.2	2.6	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|289595808|ref|YP_003482504.1|	-	6.6	6.4	7.3	0.84	9.2	0.4	2.5	3	0	0	3	3	2	0	zinc-ribbon	domain
NTP_transf_2	PF01909.18	gi|289595809|ref|YP_003482505.1|	-	4.9e-10	39.6	0.1	4.9e-10	39.6	0.1	2.6	3	1	0	3	3	3	1	Nucleotidyltransferase	domain
DUF86	PF01934.12	gi|289595809|ref|YP_003482505.1|	-	0.36	10.4	6.2	0.45	10.1	0.1	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	DUF86
Toxin_63	PF15541.1	gi|289595810|ref|YP_003482506.1|	-	0.012	15.5	0.0	0.036	14.0	0.0	1.8	1	0	0	1	1	1	0	Putative	toxin	63
ETRAMP	PF09716.5	gi|289595810|ref|YP_003482506.1|	-	0.053	13.4	0.0	0.15	12.0	0.0	1.8	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
RIH_assoc	PF08454.6	gi|289595810|ref|YP_003482506.1|	-	0.12	11.9	2.5	1.1	8.9	0.2	2.8	3	0	0	3	3	3	0	RyR	and	IP3R	Homology	associated
Excalibur	PF05901.6	gi|289595810|ref|YP_003482506.1|	-	0.16	12.3	2.6	2.6	8.4	0.1	3.3	3	0	0	3	3	3	0	Excalibur	calcium-binding	domain
DUF234	PF03008.9	gi|289595811|ref|YP_003482507.1|	-	8.6e-27	93.2	3.5	2.7e-26	91.5	1.5	2.5	3	0	0	3	3	3	1	Archaea	bacterial	proteins	of	unknown	function
Arch_ATPase	PF01637.13	gi|289595811|ref|YP_003482507.1|	-	9.4e-23	81.1	2.1	3e-22	79.4	1.4	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
Mrr_cat	PF04471.7	gi|289595811|ref|YP_003482507.1|	-	3.9e-10	39.5	0.0	7.2e-10	38.6	0.0	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
AAA_14	PF13173.1	gi|289595811|ref|YP_003482507.1|	-	2.3e-08	33.9	0.1	7.5e-08	32.3	0.1	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|289595811|ref|YP_003482507.1|	-	3.2e-07	30.5	0.0	1.1e-06	28.8	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|289595811|ref|YP_003482507.1|	-	1.3e-05	25.2	0.0	2e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
AAA_16	PF13191.1	gi|289595811|ref|YP_003482507.1|	-	1.7e-05	24.9	0.8	0.00025	21.0	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
HTH_45	PF14947.1	gi|289595811|ref|YP_003482507.1|	-	0.00062	19.5	0.0	0.0016	18.1	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF1355	PF07090.6	gi|289595811|ref|YP_003482507.1|	-	0.001	18.4	0.1	0.013	14.8	0.0	2.3	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1355)
NERD	PF08378.6	gi|289595811|ref|YP_003482507.1|	-	0.0014	18.8	0.2	0.0032	17.7	0.2	1.6	1	0	0	1	1	1	1	Nuclease-related	domain
GerE	PF00196.14	gi|289595811|ref|YP_003482507.1|	-	0.0055	15.9	0.1	1.9	7.8	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
HTH_24	PF13412.1	gi|289595811|ref|YP_003482507.1|	-	0.0071	15.7	0.0	0.02	14.2	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289595811|ref|YP_003482507.1|	-	0.012	15.3	0.7	0.058	13.1	0.1	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|289595811|ref|YP_003482507.1|	-	0.016	14.7	0.0	0.033	13.7	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
UPF0102	PF02021.12	gi|289595811|ref|YP_003482507.1|	-	0.022	14.6	0.2	0.07	13.0	0.1	1.9	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
Rrf2	PF02082.15	gi|289595811|ref|YP_003482507.1|	-	0.1	12.7	0.0	0.78	9.8	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_5	PF01022.15	gi|289595811|ref|YP_003482507.1|	-	0.13	11.9	0.0	0.3	10.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
NosD	PF05048.8	gi|289595812|ref|YP_003482508.1|	-	2.4e-79	265.8	231.3	5e-32	110.9	44.7	5.9	2	1	3	5	5	5	4	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289595812|ref|YP_003482508.1|	-	1.4e-59	200.3	277.5	2.5e-20	72.8	33.7	8.7	3	3	4	7	7	7	5	Right	handed	beta	helix	region
fn3	PF00041.16	gi|289595812|ref|YP_003482508.1|	-	4.1e-34	116.5	32.1	1.8e-08	34.4	1.2	5.5	5	0	0	5	5	5	4	Fibronectin	type	III	domain
Imm18	PF15566.1	gi|289595812|ref|YP_003482508.1|	-	0.031	13.5	1.1	4.4	6.7	0.0	3.4	3	0	0	3	3	3	0	Immunity	protein	18
TfoX_N	PF04993.8	gi|289595812|ref|YP_003482508.1|	-	0.039	13.7	0.0	2.5e+02	1.5	0.0	4.7	5	0	0	5	5	5	0	TfoX	N-terminal	domain
ApoL	PF05461.6	gi|289595812|ref|YP_003482508.1|	-	0.43	9.7	0.0	0.67	9.1	0.0	1.2	1	0	0	1	1	1	0	Apolipoprotein	L
DUF3972	PF13118.1	gi|289595813|ref|YP_003482509.1|	-	7.8e-05	22.7	4.8	0.00025	21.1	3.3	2.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3972)
ATG16	PF08614.6	gi|289595813|ref|YP_003482509.1|	-	0.0059	16.4	7.5	0.012	15.4	5.2	1.6	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Exonuc_VII_L	PF02601.10	gi|289595813|ref|YP_003482509.1|	-	0.0093	15.1	7.3	0.014	14.5	5.0	1.3	1	0	0	1	1	1	1	Exonuclease	VII,	large	subunit
IncA	PF04156.9	gi|289595813|ref|YP_003482509.1|	-	0.074	12.6	7.4	0.12	11.9	5.1	1.4	1	0	0	1	1	1	0	IncA	protein
AATF-Che1	PF13339.1	gi|289595813|ref|YP_003482509.1|	-	0.082	13.0	10.0	0.16	12.0	6.9	1.5	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
OmpH	PF03938.9	gi|289595813|ref|YP_003482509.1|	-	0.11	12.4	17.9	0.21	11.5	11.5	2.1	2	1	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
TSC22	PF01166.13	gi|289595813|ref|YP_003482509.1|	-	0.12	12.4	8.1	0.33	10.9	5.6	1.8	1	0	0	1	1	1	0	TSC-22/dip/bun	family
DUF4140	PF13600.1	gi|289595813|ref|YP_003482509.1|	-	0.14	12.6	4.4	0.18	12.2	2.3	1.7	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
EMP24_GP25L	PF01105.19	gi|289595813|ref|YP_003482509.1|	-	0.26	10.9	5.2	0.16	11.7	1.1	2.2	2	0	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
IFP_35_N	PF07334.8	gi|289595813|ref|YP_003482509.1|	-	0.47	10.4	7.9	1.8	8.5	5.5	2.1	1	0	0	1	1	1	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
MscS_porin	PF12795.2	gi|289595813|ref|YP_003482509.1|	-	0.62	9.3	10.6	0.11	11.7	4.8	1.6	2	0	0	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF342	PF03961.8	gi|289595813|ref|YP_003482509.1|	-	2.1	6.6	17.7	5.1	5.3	12.3	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF342)
DUF972	PF06156.8	gi|289595813|ref|YP_003482509.1|	-	2.6	8.4	13.1	4	7.8	6.7	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF972)
Atg14	PF10186.4	gi|289595813|ref|YP_003482509.1|	-	3.1	6.6	15.1	6.8	5.5	10.5	1.6	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
zf-ribbon_3	PF13248.1	gi|289595814|ref|YP_003482510.1|	-	2.4e-09	36.0	2.8	3.8e-09	35.4	2.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289595814|ref|YP_003482510.1|	-	1.7e-07	30.5	1.9	2.8e-07	29.8	1.3	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|289595814|ref|YP_003482510.1|	-	2.4e-06	27.2	0.3	3.8e-06	26.6	0.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|289595814|ref|YP_003482510.1|	-	0.0015	18.1	3.0	0.0038	16.9	2.1	1.6	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
DUF553	PF04473.7	gi|289595814|ref|YP_003482510.1|	-	0.0015	17.8	0.0	0.0026	17.0	0.0	1.4	1	0	0	1	1	1	1	Transglutaminase-like	domain
Prok-RING_1	PF14446.1	gi|289595814|ref|YP_003482510.1|	-	0.0038	16.9	0.5	0.0061	16.2	0.3	1.3	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
zf-LITAF-like	PF10601.4	gi|289595814|ref|YP_003482510.1|	-	0.0066	16.2	0.3	0.14	12.0	0.2	2.4	1	1	0	1	1	1	1	LITAF-like	zinc	ribbon	domain
Peptidase_C71	PF12386.3	gi|289595814|ref|YP_003482510.1|	-	0.0091	15.4	0.0	0.021	14.2	0.0	1.6	1	0	0	1	1	1	1	Pseudomurein	endo-isopeptidase	Pei
Transglut_core	PF01841.14	gi|289595814|ref|YP_003482510.1|	-	0.028	14.6	0.0	0.063	13.4	0.0	1.6	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
zf-NADH-PPase	PF09297.6	gi|289595814|ref|YP_003482510.1|	-	0.043	13.3	0.9	5	6.7	0.1	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-TRM13_CCCH	PF11722.3	gi|289595814|ref|YP_003482510.1|	-	0.084	12.2	1.5	0.21	10.9	0.2	2.1	1	1	1	2	2	2	0	CCCH	zinc	finger	in	TRM13	protein
TF_Zn_Ribbon	PF08271.7	gi|289595814|ref|YP_003482510.1|	-	1.5	8.2	5.5	4.6	6.6	0.2	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|289595814|ref|YP_003482510.1|	-	2.4	8.3	7.6	6.4	6.9	1.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|289595815|ref|YP_003482511.1|	-	2.9e-06	26.9	0.0	4.1e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|289595815|ref|YP_003482511.1|	-	3.4e-06	26.3	1.3	5.3e-06	25.7	0.9	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|289595815|ref|YP_003482511.1|	-	2.7e-05	23.2	3.8	4.4e-05	22.5	2.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289595815|ref|YP_003482511.1|	-	0.00022	20.8	1.4	0.00037	20.1	1.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
PPC	PF04151.10	gi|289595815|ref|YP_003482511.1|	-	0.045	14.7	0.1	0.11	13.4	0.1	1.7	1	0	0	1	1	1	0	Bacterial	pre-peptidase	C-terminal	domain
DUF1883	PF08980.5	gi|289595815|ref|YP_003482511.1|	-	0.086	12.3	0.2	0.17	11.4	0.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1883)
DUF2614	PF11023.3	gi|289595815|ref|YP_003482511.1|	-	0.1	12.4	0.5	0.26	11.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2614)
zf-C3HC4_3	PF13920.1	gi|289595815|ref|YP_003482511.1|	-	0.11	12.2	0.8	0.17	11.5	0.6	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Rad50_zn_hook	PF04423.9	gi|289595815|ref|YP_003482511.1|	-	1.1	8.7	5.5	0.39	10.2	0.6	2.1	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
DDE_Tnp_1	PF01609.16	gi|289595816|ref|YP_003482512.1|	-	7.7e-20	71.3	0.3	1.6e-19	70.2	0.2	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289595816|ref|YP_003482512.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289595816|ref|YP_003482512.1|	-	0.0014	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|289595816|ref|YP_003482512.1|	-	0.092	12.9	2.1	0.26	11.4	0.4	2.3	2	1	0	2	2	2	0	Transposase	DDE	domain
HTH_38	PF13936.1	gi|289595816|ref|YP_003482512.1|	-	0.096	12.2	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF4014	PF13198.1	gi|289595817|ref|YP_003482513.1|	-	0.72	10.3	0.0	0.72	10.3	0.0	3.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4014)
PKD	PF00801.15	gi|289595818|ref|YP_003482514.1|	-	4.2e-15	55.2	46.7	2.2e-11	43.3	1.2	8.8	8	1	1	9	9	8	3	PKD	domain
Reo_sigmaC	PF04582.7	gi|289595818|ref|YP_003482514.1|	-	1.5e-11	44.1	24.3	2.6e-07	30.1	6.1	3.2	2	1	1	3	3	3	2	Reovirus	sigma	C	capsid	protein
Baculo_PEP_C	PF04513.7	gi|289595818|ref|YP_003482514.1|	-	7.3e-09	35.5	44.6	8.8e-05	22.3	12.7	3.5	1	1	2	3	3	3	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF1664	PF07889.7	gi|289595818|ref|YP_003482514.1|	-	1.3e-08	34.6	11.5	0.016	14.9	1.5	3.8	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF1664)
AAA_13	PF13166.1	gi|289595818|ref|YP_003482514.1|	-	5.9e-08	31.6	9.2	4.3e-06	25.5	4.8	2.1	1	1	1	2	2	2	2	AAA	domain
MscS_porin	PF12795.2	gi|289595818|ref|YP_003482514.1|	-	7e-08	32.0	0.4	0.0079	15.5	0.5	2.5	1	1	0	2	2	2	2	Mechanosensitive	ion	channel	porin	domain
TBPIP	PF07106.8	gi|289595818|ref|YP_003482514.1|	-	1.6e-07	31.0	0.6	0.0013	18.3	0.2	2.6	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NPV_P10	PF05531.7	gi|289595818|ref|YP_003482514.1|	-	1.9e-06	27.9	27.3	0.013	15.7	1.3	4.5	1	1	3	4	4	4	2	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.6	gi|289595818|ref|YP_003482514.1|	-	8.3e-06	24.6	1.8	0.0002	20.1	1.0	2.4	1	1	1	2	2	2	2	Spc7	kinetochore	protein
ATG16	PF08614.6	gi|289595818|ref|YP_003482514.1|	-	9.4e-06	25.5	1.5	8.8e-05	22.4	0.9	2.0	1	1	1	2	2	2	1	Autophagy	protein	16	(ATG16)
Cast	PF10174.4	gi|289595818|ref|YP_003482514.1|	-	1.3e-05	23.4	0.0	1.9e-05	22.9	0.0	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
EzrA	PF06160.7	gi|289595818|ref|YP_003482514.1|	-	1.4e-05	23.5	0.6	0.018	13.2	0.1	2.5	1	1	1	2	2	2	2	Septation	ring	formation	regulator,	EzrA
Laminin_II	PF06009.7	gi|289595818|ref|YP_003482514.1|	-	4.2e-05	23.3	13.9	0.019	14.7	1.7	3.5	1	1	2	3	3	3	2	Laminin	Domain	II
FlaC_arch	PF05377.6	gi|289595818|ref|YP_003482514.1|	-	0.00014	21.6	11.6	2.8	7.9	0.8	5.3	1	1	3	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
COG5	PF10392.4	gi|289595818|ref|YP_003482514.1|	-	0.00019	21.4	0.2	5.2	7.0	0.0	3.4	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
CENP-F_leu_zip	PF10473.4	gi|289595818|ref|YP_003482514.1|	-	0.0002	21.2	0.0	1.1	9.0	0.0	2.8	1	1	2	3	3	3	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Myosin_tail_1	PF01576.14	gi|289595818|ref|YP_003482514.1|	-	0.00025	18.9	0.0	0.00037	18.3	0.0	1.2	1	0	0	1	1	1	1	Myosin	tail
Y_Y_Y	PF07495.8	gi|289595818|ref|YP_003482514.1|	-	0.00031	20.4	28.5	0.014	15.1	6.4	5.1	5	0	0	5	5	4	2	Y_Y_Y	domain
WEMBL	PF05701.6	gi|289595818|ref|YP_003482514.1|	-	0.00038	19.0	0.0	0.00063	18.3	0.0	1.2	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
Filament	PF00038.16	gi|289595818|ref|YP_003482514.1|	-	0.0006	19.3	0.0	0.0093	15.4	0.0	2.1	1	1	0	2	2	2	1	Intermediate	filament	protein
Prefoldin	PF02996.12	gi|289595818|ref|YP_003482514.1|	-	0.0009	18.8	4.4	9	5.9	0.1	4.1	2	1	3	5	5	4	0	Prefoldin	subunit
ADIP	PF11559.3	gi|289595818|ref|YP_003482514.1|	-	0.00099	19.0	0.1	0.49	10.2	0.0	2.3	1	1	1	2	2	2	1	Afadin-	and	alpha	-actinin-Binding
Prefoldin_2	PF01920.15	gi|289595818|ref|YP_003482514.1|	-	0.0011	18.6	0.4	0.015	15.0	0.2	2.8	2	1	1	3	3	2	2	Prefoldin	subunit
IncA	PF04156.9	gi|289595818|ref|YP_003482514.1|	-	0.0012	18.5	0.0	0.085	12.4	0.0	2.8	2	1	1	3	3	3	1	IncA	protein
DUF869	PF05911.6	gi|289595818|ref|YP_003482514.1|	-	0.0012	17.1	0.1	0.0021	16.4	0.0	1.3	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
Cortex-I_coil	PF09304.5	gi|289595818|ref|YP_003482514.1|	-	0.0014	18.6	0.1	0.0064	16.5	0.1	2.0	1	1	1	2	2	2	1	Cortexillin	I,	coiled	coil
IFT57	PF10498.4	gi|289595818|ref|YP_003482514.1|	-	0.0019	17.0	5.1	0.11	11.1	1.8	2.2	1	1	1	2	2	2	2	Intra-flagellar	transport	protein	57
RmuC	PF02646.11	gi|289595818|ref|YP_003482514.1|	-	0.002	17.0	3.2	0.65	8.7	0.1	3.1	1	1	2	3	3	3	1	RmuC	family
DUF3450	PF11932.3	gi|289595818|ref|YP_003482514.1|	-	0.0021	17.3	0.3	0.36	10.0	0.0	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3450)
Fib_alpha	PF08702.5	gi|289595818|ref|YP_003482514.1|	-	0.0025	17.9	10.9	0.023	14.8	4.2	2.8	1	1	1	2	2	2	1	Fibrinogen	alpha/beta	chain	family
Big_3_4	PF13754.1	gi|289595818|ref|YP_003482514.1|	-	0.003	17.8	1.6	0.003	17.8	1.1	9.7	10	1	1	11	11	6	1	Bacterial	Ig-like	domain	(group	3)
Bacillus_HBL	PF05791.6	gi|289595818|ref|YP_003482514.1|	-	0.0041	16.5	17.4	0.22	10.8	3.3	3.3	1	1	2	4	4	4	3	Bacillus	haemolytic	enterotoxin	(HBL)
Syntaxin-6_N	PF09177.6	gi|289595818|ref|YP_003482514.1|	-	0.0057	17.0	2.5	7	7.1	0.1	3.8	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
COG2	PF06148.6	gi|289595818|ref|YP_003482514.1|	-	0.006	16.4	1.0	5	6.9	0.0	3.0	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
APG6	PF04111.7	gi|289595818|ref|YP_003482514.1|	-	0.0083	15.2	0.0	0.013	14.5	0.0	1.2	1	0	0	1	1	1	1	Autophagy	protein	Apg6
DUF2730	PF10805.3	gi|289595818|ref|YP_003482514.1|	-	0.0087	15.7	2.5	0.48	10.1	0.1	3.1	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2730)
Laminin_I	PF06008.9	gi|289595818|ref|YP_003482514.1|	-	0.0096	15.2	6.5	0.043	13.1	2.6	2.1	1	1	1	2	2	2	1	Laminin	Domain	I
CALCOCO1	PF07888.6	gi|289595818|ref|YP_003482514.1|	-	0.011	14.0	0.1	0.022	13.1	0.1	1.5	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
XhlA	PF10779.4	gi|289595818|ref|YP_003482514.1|	-	0.014	15.2	1.5	0.014	15.2	1.0	3.9	3	1	0	3	3	3	0	Haemolysin	XhlA
MAD	PF05557.8	gi|289595818|ref|YP_003482514.1|	-	0.015	13.4	0.2	0.023	12.8	0.1	1.2	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
WXG100	PF06013.7	gi|289595818|ref|YP_003482514.1|	-	0.016	15.1	7.0	4.5	7.3	0.2	3.9	2	1	2	4	4	4	0	Proteins	of	100	residues	with	WXG
DUF3584	PF12128.3	gi|289595818|ref|YP_003482514.1|	-	0.017	12.5	0.0	0.023	12.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DUF972	PF06156.8	gi|289595818|ref|YP_003482514.1|	-	0.026	14.8	0.3	14	6.0	0.0	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF972)
MT	PF12777.2	gi|289595818|ref|YP_003482514.1|	-	0.038	12.7	4.8	0.3	9.8	0.5	2.4	1	1	1	2	2	2	0	Microtubule-binding	stalk	of	dynein	motor
Atg14	PF10186.4	gi|289595818|ref|YP_003482514.1|	-	0.052	12.4	0.0	0.099	11.5	0.0	1.4	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
GAS	PF13851.1	gi|289595818|ref|YP_003482514.1|	-	0.056	12.6	0.0	0.55	9.3	0.0	1.9	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
TMCO5	PF14992.1	gi|289595818|ref|YP_003482514.1|	-	0.064	12.3	0.0	0.19	10.8	0.0	1.6	1	1	1	2	2	2	0	TMCO5	family
Sec3_C	PF09763.4	gi|289595818|ref|YP_003482514.1|	-	0.076	11.1	4.8	0.063	11.4	1.9	1.6	1	1	1	2	2	2	0	Exocyst	complex	component	Sec3
Spc24	PF08286.6	gi|289595818|ref|YP_003482514.1|	-	0.079	12.6	3.9	1.8	8.2	0.9	3.3	1	1	2	3	3	3	0	Spc24	subunit	of	Ndc80
DUF4618	PF15397.1	gi|289595818|ref|YP_003482514.1|	-	0.083	12.2	0.1	6.9	5.9	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
Snapin_Pallidin	PF14712.1	gi|289595818|ref|YP_003482514.1|	-	0.084	13.1	0.9	8.6	6.7	0.1	2.7	1	1	2	3	3	3	0	Snapin/Pallidin
OAD_gamma	PF04277.8	gi|289595818|ref|YP_003482514.1|	-	0.085	13.2	0.1	0.22	11.9	0.1	1.7	1	0	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
BicD	PF09730.4	gi|289595818|ref|YP_003482514.1|	-	0.088	11.1	0.5	0.21	9.8	0.3	1.4	1	1	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
DUF4201	PF13870.1	gi|289595818|ref|YP_003482514.1|	-	0.1	12.0	0.0	0.24	10.8	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
DUF2968	PF11180.3	gi|289595818|ref|YP_003482514.1|	-	0.11	11.8	0.1	4.9	6.4	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DUF1202	PF06717.6	gi|289595818|ref|YP_003482514.1|	-	0.12	11.6	7.3	3.4	6.8	1.4	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1202)
AAA_27	PF13514.1	gi|289595818|ref|YP_003482514.1|	-	0.17	9.5	0.0	7.8	4.0	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
Syntaxin	PF00804.20	gi|289595818|ref|YP_003482514.1|	-	0.18	11.9	13.5	1.8	8.7	2.4	3.7	1	1	2	3	3	3	0	Syntaxin
CASP_C	PF08172.7	gi|289595818|ref|YP_003482514.1|	-	0.2	10.6	1.6	12	4.8	0.1	3.2	2	1	2	4	4	4	0	CASP	C	terminal
Dynamitin	PF04912.9	gi|289595818|ref|YP_003482514.1|	-	0.32	9.7	7.0	0.073	11.8	1.0	2.3	2	1	1	3	3	3	0	Dynamitin
AIP3	PF03915.8	gi|289595818|ref|YP_003482514.1|	-	0.55	9.0	5.2	3.6	6.4	3.8	1.8	1	1	0	1	1	1	0	Actin	interacting	protein	3
Vps51	PF08700.6	gi|289595818|ref|YP_003482514.1|	-	0.59	10.0	10.9	76	3.2	0.0	5.2	2	2	5	7	7	7	0	Vps51/Vps67
Seryl_tRNA_N	PF02403.17	gi|289595818|ref|YP_003482514.1|	-	0.59	10.1	5.4	36	4.4	3.7	3.0	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
Cluap1	PF10234.4	gi|289595818|ref|YP_003482514.1|	-	0.62	9.2	2.6	7.6	5.6	0.1	2.2	2	1	1	3	3	2	0	Clusterin-associated	protein-1
HsbA	PF12296.3	gi|289595818|ref|YP_003482514.1|	-	0.65	9.8	35.3	1.4	8.7	1.3	4.9	1	1	5	6	6	5	0	Hydrophobic	surface	binding	protein	A
HrpB7	PF09486.5	gi|289595818|ref|YP_003482514.1|	-	0.81	9.6	0.8	3	7.7	0.0	2.2	2	1	0	2	2	1	0	Bacterial	type	III	secretion	protein	(HrpB7)
Lectin_N	PF03954.9	gi|289595818|ref|YP_003482514.1|	-	1.1	8.6	10.4	4.8	6.5	0.4	3.8	1	1	4	5	5	5	0	Hepatic	lectin,	N-terminal	domain
Paramyx_P_V_C	PF03210.8	gi|289595818|ref|YP_003482514.1|	-	1.7	8.4	18.0	0.64	9.8	0.5	3.8	2	1	1	3	3	3	0	Paramyxovirus	P/V	phosphoprotein	C-terminal
YlbD_coat	PF14071.1	gi|289595818|ref|YP_003482514.1|	-	1.8	8.6	5.8	38	4.3	0.1	3.5	1	1	2	4	4	3	0	Putative	coat	protein
MCPsignal	PF00015.16	gi|289595818|ref|YP_003482514.1|	-	3.5	7.1	21.7	2.3	7.6	6.0	2.9	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
HTH_45	PF14947.1	gi|289595820|ref|YP_003482516.1|	-	4.8e-14	51.9	1.5	5.5e-14	51.7	1.0	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|289595820|ref|YP_003482516.1|	-	0.00017	21.2	0.1	0.00022	20.9	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Rrf2	PF02082.15	gi|289595820|ref|YP_003482516.1|	-	0.00055	20.0	0.0	0.00064	19.7	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|289595820|ref|YP_003482516.1|	-	0.0061	16.2	0.1	0.009	15.7	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
CRS1_YhbY	PF01985.16	gi|289595820|ref|YP_003482516.1|	-	0.0062	16.5	0.2	0.0078	16.2	0.1	1.3	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
Mrr_N	PF14338.1	gi|289595820|ref|YP_003482516.1|	-	0.0074	16.3	0.2	0.021	14.9	0.1	1.6	1	1	1	2	2	2	1	Mrr	N-terminal	domain
MarR	PF01047.17	gi|289595820|ref|YP_003482516.1|	-	0.015	15.0	0.0	0.023	14.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_34	PF13601.1	gi|289595820|ref|YP_003482516.1|	-	0.016	15.2	0.1	0.021	14.8	0.1	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF387	PF04079.11	gi|289595820|ref|YP_003482516.1|	-	0.024	14.0	0.1	0.026	13.9	0.1	1.1	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
Ftsk_gamma	PF09397.5	gi|289595820|ref|YP_003482516.1|	-	0.047	13.3	0.1	0.065	12.9	0.1	1.2	1	0	0	1	1	1	0	Ftsk	gamma	domain
MarR_2	PF12802.2	gi|289595820|ref|YP_003482516.1|	-	0.055	13.1	0.0	0.075	12.7	0.0	1.2	1	0	0	1	1	1	0	MarR	family
SRP54_N	PF02881.14	gi|289595820|ref|YP_003482516.1|	-	0.059	13.4	0.2	0.097	12.7	0.2	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	helical	bundle	domain
Pox_VLTF3	PF04947.9	gi|289595820|ref|YP_003482516.1|	-	0.061	12.8	1.8	0.065	12.7	1.2	1.1	1	0	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
Penicillinase_R	PF03965.11	gi|289595820|ref|YP_003482516.1|	-	0.1	12.6	0.1	0.13	12.3	0.1	1.2	1	0	0	1	1	1	0	Penicillinase	repressor
PadR	PF03551.9	gi|289595820|ref|YP_003482516.1|	-	0.12	12.2	0.1	0.2	11.4	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2084	PF09857.4	gi|289595820|ref|YP_003482516.1|	-	0.12	12.1	0.1	0.18	11.5	0.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2084)
Arch_fla_DE	PF04659.8	gi|289595821|ref|YP_003482517.1|	-	1.2e-20	73.1	3.2	2.8e-15	55.9	0.3	3.0	2	2	1	3	3	3	2	Archaeal	flagella	protein
FlaC_arch	PF05377.6	gi|289595821|ref|YP_003482517.1|	-	5.9e-12	45.2	6.3	1.5e-11	44.0	1.8	2.8	2	0	0	2	2	2	1	Flagella	accessory	protein	C	(FlaC)
Macoilin	PF09726.4	gi|289595821|ref|YP_003482517.1|	-	0.00025	19.5	2.6	0.0011	17.3	0.5	2.0	2	0	0	2	2	2	1	Transmembrane	protein
DUF1664	PF07889.7	gi|289595821|ref|YP_003482517.1|	-	0.0015	18.3	3.3	0.002	17.9	1.2	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1664)
IncA	PF04156.9	gi|289595821|ref|YP_003482517.1|	-	0.0052	16.4	3.8	0.0079	15.8	0.8	2.2	2	0	0	2	2	2	1	IncA	protein
DivIVA	PF05103.8	gi|289595821|ref|YP_003482517.1|	-	0.0063	16.5	1.0	0.0063	16.5	0.7	2.5	3	0	0	3	3	2	1	DivIVA	protein
NPV_P10	PF05531.7	gi|289595821|ref|YP_003482517.1|	-	0.0087	16.2	1.4	0.11	12.7	0.4	3.1	3	1	0	3	3	3	1	Nucleopolyhedrovirus	P10	protein
DUF812	PF05667.6	gi|289595821|ref|YP_003482517.1|	-	0.01	14.3	2.7	0.019	13.5	1.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
Matrilin_ccoil	PF10393.4	gi|289595821|ref|YP_003482517.1|	-	0.011	15.0	0.6	0.034	13.5	0.0	2.1	2	0	0	2	2	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Med9	PF07544.8	gi|289595821|ref|YP_003482517.1|	-	0.02	14.5	3.0	0.18	11.5	0.5	2.8	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
COG2	PF06148.6	gi|289595821|ref|YP_003482517.1|	-	0.024	14.5	1.0	0.1	12.4	0.2	2.3	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Myosin_tail_1	PF01576.14	gi|289595821|ref|YP_003482517.1|	-	0.029	12.1	4.4	0.055	11.1	3.1	1.4	1	0	0	1	1	1	0	Myosin	tail
APG17	PF04108.7	gi|289595821|ref|YP_003482517.1|	-	0.048	12.4	0.7	0.085	11.6	0.5	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg17
EzrA	PF06160.7	gi|289595821|ref|YP_003482517.1|	-	0.053	11.6	3.6	0.028	12.6	0.6	1.9	2	0	0	2	2	2	0	Septation	ring	formation	regulator,	EzrA
AAA_13	PF13166.1	gi|289595821|ref|YP_003482517.1|	-	0.076	11.4	6.1	0.033	12.6	2.4	1.7	2	0	0	2	2	2	0	AAA	domain
Sec3_C	PF09763.4	gi|289595821|ref|YP_003482517.1|	-	0.078	11.0	2.4	0.15	10.1	1.1	1.7	2	0	0	2	2	2	0	Exocyst	complex	component	Sec3
TraF_2	PF13729.1	gi|289595821|ref|YP_003482517.1|	-	0.082	11.7	0.3	0.13	11.0	0.2	1.3	1	0	0	1	1	1	0	F	plasmid	transfer	operon,	TraF,	protein
SlyX	PF04102.7	gi|289595821|ref|YP_003482517.1|	-	0.12	12.7	1.6	0.18	12.1	0.3	1.9	2	0	0	2	2	1	0	SlyX
ATG16	PF08614.6	gi|289595821|ref|YP_003482517.1|	-	0.24	11.2	6.6	0.079	12.7	2.3	1.8	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
YlbD_coat	PF14071.1	gi|289595821|ref|YP_003482517.1|	-	0.27	11.3	3.0	2.9	7.9	1.3	3.1	2	1	0	2	2	2	0	Putative	coat	protein
DivIC	PF04977.10	gi|289595821|ref|YP_003482517.1|	-	0.39	10.2	6.4	6	6.4	1.4	3.6	2	1	1	3	3	3	0	Septum	formation	initiator
Prefoldin	PF02996.12	gi|289595821|ref|YP_003482517.1|	-	0.61	9.7	5.6	14	5.3	0.3	3.2	2	1	1	3	3	3	0	Prefoldin	subunit
DUF2120	PF09893.4	gi|289595821|ref|YP_003482517.1|	-	0.73	9.7	5.8	0.22	11.4	1.8	1.7	2	0	0	2	2	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
BLOC1_2	PF10046.4	gi|289595821|ref|YP_003482517.1|	-	0.87	9.7	6.1	2	8.5	0.3	3.1	2	1	1	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Streptin-Immun	PF11083.3	gi|289595821|ref|YP_003482517.1|	-	0.89	9.5	4.7	2.4	8.1	0.3	2.8	2	1	1	3	3	3	0	Lantibiotic	streptin	immunity	protein
Phage_GP20	PF06810.6	gi|289595821|ref|YP_003482517.1|	-	6.2	6.2	12.1	0.57	9.6	0.9	3.0	3	0	0	3	3	3	0	Phage	minor	structural	protein	GP20
Arch_flagellin	PF01917.11	gi|289595822|ref|YP_003482518.1|	-	1.1e-36	126.3	7.5	1.2e-36	126.1	5.2	1.0	1	0	0	1	1	1	1	Archaebacterial	flagellin
DUF3953	PF13129.1	gi|289595822|ref|YP_003482518.1|	-	0.12	12.0	0.5	0.12	12.0	0.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3953)
CARDB	PF07705.6	gi|289595823|ref|YP_003482519.1|	-	0.00067	19.6	0.2	0.00067	19.6	0.2	6.2	3	1	2	6	6	6	1	CARDB
BACON	PF13004.2	gi|289595823|ref|YP_003482519.1|	-	0.4	10.9	4.6	0.18	12.0	0.6	2.5	2	0	0	2	2	2	0	Bacteroidetes-Associated	Carbohydrate-binding	Often	N-terminal
HTH_24	PF13412.1	gi|289595824|ref|YP_003482520.1|	-	2.3e-05	23.6	0.1	4e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289595824|ref|YP_003482520.1|	-	2.4e-05	23.9	0.4	3.8e-05	23.3	0.3	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|289595824|ref|YP_003482520.1|	-	0.00029	21.0	0.0	0.0004	20.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|289595824|ref|YP_003482520.1|	-	0.0029	17.3	0.0	0.0039	16.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|289595824|ref|YP_003482520.1|	-	0.018	14.9	0.1	0.023	14.5	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_28	PF13518.1	gi|289595824|ref|YP_003482520.1|	-	0.12	12.3	0.0	0.22	11.5	0.0	1.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|289595824|ref|YP_003482520.1|	-	0.14	11.6	0.0	0.28	10.7	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|289595825|ref|YP_003482521.1|	-	2e-07	30.7	0.0	3.9e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289595825|ref|YP_003482521.1|	-	3.7e-05	23.3	0.1	5.2e-05	22.8	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|289595825|ref|YP_003482521.1|	-	4.5e-05	22.7	0.1	0.00016	21.0	0.0	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|289595825|ref|YP_003482521.1|	-	0.00019	20.9	0.0	0.00026	20.4	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HemN_C	PF06969.11	gi|289595825|ref|YP_003482521.1|	-	0.00057	19.8	0.0	0.0012	18.9	0.0	1.5	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_11	PF08279.7	gi|289595825|ref|YP_003482521.1|	-	0.00063	19.3	0.1	0.001	18.6	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
DUF2250	PF10007.4	gi|289595825|ref|YP_003482521.1|	-	0.0016	18.2	0.1	0.0027	17.5	0.0	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|289595825|ref|YP_003482521.1|	-	0.0029	17.8	0.0	0.0049	17.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|289595825|ref|YP_003482521.1|	-	0.0043	16.6	0.0	0.0068	16.0	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|289595825|ref|YP_003482521.1|	-	0.0092	15.9	0.0	0.015	15.2	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|289595825|ref|YP_003482521.1|	-	0.011	15.4	0.0	0.021	14.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Rrf2	PF02082.15	gi|289595825|ref|YP_003482521.1|	-	0.018	15.1	0.0	0.028	14.5	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
DUF4423	PF14394.1	gi|289595825|ref|YP_003482521.1|	-	0.1	12.1	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Epimerase	PF01370.16	gi|289595826|ref|YP_003482522.1|	-	2.1e-48	164.8	0.2	2.5e-48	164.5	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|289595826|ref|YP_003482522.1|	-	4.1e-25	88.0	0.1	5.3e-25	87.6	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|289595826|ref|YP_003482522.1|	-	4.2e-21	75.0	0.9	4.8e-20	71.6	0.6	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.12	gi|289595826|ref|YP_003482522.1|	-	8.7e-17	60.9	0.0	1e-16	60.7	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.7	gi|289595826|ref|YP_003482522.1|	-	4.9e-14	51.8	0.1	2.2e-12	46.4	0.1	2.3	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|289595826|ref|YP_003482522.1|	-	8.1e-12	45.5	0.0	1.2e-11	44.9	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|289595826|ref|YP_003482522.1|	-	4.1e-06	26.2	0.3	9.8e-06	24.9	0.0	1.7	2	0	0	2	2	2	1	NmrA-like	family
adh_short	PF00106.20	gi|289595826|ref|YP_003482522.1|	-	7.1e-06	26.0	0.1	3.2e-05	23.8	0.0	2.0	2	0	0	2	2	2	1	short	chain	dehydrogenase
Saccharop_dh	PF03435.13	gi|289595826|ref|YP_003482522.1|	-	0.0078	15.2	0.0	0.011	14.7	0.0	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
DapB_N	PF01113.15	gi|289595826|ref|YP_003482522.1|	-	0.017	15.0	0.5	0.065	13.1	0.1	1.9	1	1	1	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
TrkA_N	PF02254.13	gi|289595826|ref|YP_003482522.1|	-	0.057	13.4	0.1	0.098	12.6	0.0	1.5	1	1	0	1	1	1	0	TrkA-N	domain
KR	PF08659.5	gi|289595826|ref|YP_003482522.1|	-	0.061	12.9	0.0	0.13	11.8	0.0	1.6	1	1	0	1	1	1	0	KR	domain
3HCDH_N	PF02737.13	gi|289595826|ref|YP_003482522.1|	-	0.065	12.8	0.0	0.1	12.2	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF134	PF02001.11	gi|289595826|ref|YP_003482522.1|	-	0.13	12.1	0.0	0.26	11.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF134
Sm_multidrug_ex	PF06695.6	gi|289595827|ref|YP_003482523.1|	-	1.7e-10	41.1	4.4	1.7e-10	41.1	3.1	2.0	1	1	1	2	2	2	1	Putative	small	multi-drug	export	protein
Ctr	PF04145.10	gi|289595827|ref|YP_003482523.1|	-	0.12	12.3	2.4	2	8.4	0.1	2.5	2	0	0	2	2	2	0	Ctr	copper	transporter	family
Fibrillarin	PF01269.12	gi|289595828|ref|YP_003482524.1|	-	4.7e-58	195.8	0.3	5.1e-58	195.7	0.2	1.0	1	0	0	1	1	1	1	Fibrillarin
DUF2629	PF10945.3	gi|289595828|ref|YP_003482524.1|	-	0.15	11.4	0.0	0.32	10.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2629)
UPF0020	PF01170.13	gi|289595829|ref|YP_003482525.1|	-	2.2e-38	131.6	0.0	3.2e-38	131.1	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.12	gi|289595829|ref|YP_003482525.1|	-	9.3e-21	74.2	1.5	1.9e-20	73.1	1.0	1.5	1	0	0	1	1	1	1	THUMP	domain
Methyltransf_26	PF13659.1	gi|289595829|ref|YP_003482525.1|	-	4e-12	46.1	0.0	2e-11	43.9	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289595829|ref|YP_003482525.1|	-	0.0042	16.6	0.0	1	8.9	0.1	2.3	2	0	0	2	2	2	2	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|289595829|ref|YP_003482525.1|	-	0.0047	16.4	0.0	0.016	14.7	0.0	1.8	2	0	0	2	2	2	1	DNA	methylase
MTS	PF05175.9	gi|289595829|ref|YP_003482525.1|	-	0.0061	15.9	0.0	0.046	13.1	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	small	domain
PTS_IIB	PF02302.12	gi|289595830|ref|YP_003482526.1|	-	6e-06	26.6	3.7	0.094	13.2	0.0	4.3	3	1	1	5	5	5	2	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
cobW	PF02492.14	gi|289595830|ref|YP_003482526.1|	-	4.8e-05	22.8	0.0	0.00013	21.4	0.0	1.8	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
B12-binding	PF02310.14	gi|289595830|ref|YP_003482526.1|	-	0.016	15.0	0.2	12	5.7	0.0	3.5	4	0	0	4	4	4	0	B12	binding	domain
Semialdhyde_dh	PF01118.19	gi|289595830|ref|YP_003482526.1|	-	0.016	15.4	0.0	0.7	10.2	0.0	3.1	3	0	0	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
AAA_17	PF13207.1	gi|289595830|ref|YP_003482526.1|	-	0.039	14.7	0.3	0.16	12.8	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
CbiA	PF01656.18	gi|289595830|ref|YP_003482526.1|	-	0.041	13.2	4.9	0.11	11.9	0.9	3.0	3	1	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
LpxK	PF02606.9	gi|289595830|ref|YP_003482526.1|	-	0.05	12.5	0.1	0.14	11.0	0.0	1.8	1	1	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
MobB	PF03205.9	gi|289595830|ref|YP_003482526.1|	-	0.055	13.1	0.1	0.28	10.9	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|289595830|ref|YP_003482526.1|	-	0.072	12.6	0.1	6.8	6.2	0.1	3.1	3	0	0	3	3	3	0	AAA	domain
Peptidase_C11	PF03415.9	gi|289595831|ref|YP_003482527.1|	-	3.4e-34	118.4	11.0	7.8e-34	117.3	7.5	1.6	1	1	0	1	1	1	1	Clostripain	family
CARDB	PF07705.6	gi|289595831|ref|YP_003482527.1|	-	4.9e-20	71.4	8.9	1.4e-19	69.9	4.5	3.2	2	1	1	3	3	3	1	CARDB
Big_3_4	PF13754.1	gi|289595831|ref|YP_003482527.1|	-	9.8e-17	61.0	0.0	3.4e-07	30.4	0.0	5.0	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	3)
fn3	PF00041.16	gi|289595831|ref|YP_003482527.1|	-	2.7e-09	37.0	2.9	6.1e-08	32.6	0.0	4.0	4	0	0	4	4	4	1	Fibronectin	type	III	domain
SWM_repeat	PF13753.1	gi|289595831|ref|YP_003482527.1|	-	0.002	17.2	6.9	0.0024	16.9	0.2	3.6	3	2	1	4	4	4	1	Putative	flagellar	system-associated	repeat
DUF11	PF01345.13	gi|289595831|ref|YP_003482527.1|	-	0.06	13.3	0.0	0.19	11.7	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF11
tRNA-synt_1	PF00133.17	gi|289595832|ref|YP_003482528.1|	-	4.6e-202	672.2	0.4	8e-202	671.4	0.3	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|289595832|ref|YP_003482528.1|	-	2e-32	112.0	2.2	5.8e-32	110.5	0.5	2.5	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|289595832|ref|YP_003482528.1|	-	4.6e-23	81.5	1.2	2.3e-08	33.0	0.0	4.2	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|289595832|ref|YP_003482528.1|	-	1.8e-06	27.3	0.0	0.0017	17.5	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|289595832|ref|YP_003482528.1|	-	8.6e-06	25.1	0.5	2.6e-05	23.6	0.0	2.0	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.13	gi|289595832|ref|YP_003482528.1|	-	3.5e-05	22.6	0.0	0.00025	19.8	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
zf-ribbon_3	PF13248.1	gi|289595832|ref|YP_003482528.1|	-	0.0014	17.7	3.8	0.26	10.5	0.1	3.4	3	0	0	3	3	3	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289595832|ref|YP_003482528.1|	-	0.0075	16.1	3.6	0.033	14.1	0.1	2.8	3	0	0	3	3	2	1	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.6	gi|289595832|ref|YP_003482528.1|	-	0.014	14.8	5.0	0.32	10.5	0.2	3.1	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289595832|ref|YP_003482528.1|	-	0.024	14.1	5.6	0.59	9.6	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.2	gi|289595832|ref|YP_003482528.1|	-	0.047	13.5	1.3	9	6.2	0.0	3.3	3	1	1	4	4	4	0	Double	zinc	ribbon
zf-TFIIB	PF13453.1	gi|289595832|ref|YP_003482528.1|	-	0.054	12.6	1.0	7.9	5.7	0.0	3.0	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Rad50_zn_hook	PF04423.9	gi|289595832|ref|YP_003482528.1|	-	0.16	11.4	3.4	1.3	8.5	0.2	3.7	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DNA_ligase_ZBD	PF03119.11	gi|289595832|ref|YP_003482528.1|	-	0.97	9.1	4.5	18	5.1	0.2	2.8	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Nudix_N_2	PF14803.1	gi|289595832|ref|YP_003482528.1|	-	0.98	9.1	5.9	3.1	7.5	0.2	3.2	3	0	0	3	3	3	0	Nudix	N-terminal
Mu-like_Com	PF10122.4	gi|289595832|ref|YP_003482528.1|	-	2.8	7.0	6.8	1.8	7.6	0.1	2.9	3	0	0	3	3	3	0	Mu-like	prophage	protein	Com
Auto_anti-p27	PF06677.7	gi|289595832|ref|YP_003482528.1|	-	5.1	6.9	8.4	20	5.0	0.2	3.5	4	0	0	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Innexin	PF00876.13	gi|289595833|ref|YP_003482529.1|	-	0.017	14.2	1.2	0.023	13.8	0.8	1.4	1	0	0	1	1	1	0	Innexin
OppC_N	PF12911.2	gi|289595833|ref|YP_003482529.1|	-	0.52	9.7	0.0	0.52	9.7	0.0	2.7	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DeoC	PF01791.4	gi|289595834|ref|YP_003482530.1|	-	9.3e-60	201.8	8.4	1e-59	201.6	5.8	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
NanE	PF04131.9	gi|289595834|ref|YP_003482530.1|	-	9.4e-05	21.4	1.2	0.00015	20.7	0.9	1.4	1	0	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF556	PF04476.8	gi|289595834|ref|YP_003482530.1|	-	0.0012	18.1	4.6	0.003	16.8	2.4	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF556)
DHDPS	PF00701.17	gi|289595834|ref|YP_003482530.1|	-	0.009	14.6	0.2	0.88	8.1	0.0	2.5	2	1	0	2	2	2	2	Dihydrodipicolinate	synthetase	family
DHO_dh	PF01180.16	gi|289595834|ref|YP_003482530.1|	-	0.019	13.9	3.5	0.021	13.7	1.9	1.6	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
MutL_C	PF08676.6	gi|289595835|ref|YP_003482531.1|	-	2e-40	137.7	0.0	3.9e-40	136.7	0.0	1.5	1	0	0	1	1	1	1	MutL	C	terminal	dimerisation	domain
DNA_mis_repair	PF01119.14	gi|289595835|ref|YP_003482531.1|	-	8.3e-31	105.9	0.1	1.4e-30	105.1	0.1	1.4	1	0	0	1	1	1	1	DNA	mismatch	repair	protein,	C-terminal	domain
HATPase_c_3	PF13589.1	gi|289595835|ref|YP_003482531.1|	-	4.6e-16	58.7	0.8	1.7e-15	56.8	0.2	2.0	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|289595835|ref|YP_003482531.1|	-	4e-11	42.6	1.2	1.8e-10	40.5	0.1	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
OTCace	PF00185.19	gi|289595836|ref|YP_003482532.1|	-	1.1e-60	204.0	0.2	3.7e-60	202.3	0.1	1.8	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|289595836|ref|YP_003482532.1|	-	2.8e-50	169.6	0.0	4e-50	169.1	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
RHH_1	PF01402.16	gi|289595837|ref|YP_003482533.1|	-	6.5e-10	38.4	0.3	6.5e-10	38.4	0.2	2.2	3	0	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
RepB-RCR_reg	PF10723.4	gi|289595837|ref|YP_003482533.1|	-	1.7e-05	24.4	0.5	4.5e-05	23.0	0.3	1.7	1	1	0	1	1	1	1	Replication	regulatory	protein	RepB
DUF2811	PF10929.3	gi|289595837|ref|YP_003482533.1|	-	0.0021	18.0	0.1	0.0082	16.1	0.0	2.0	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2811)
RelB	PF04221.7	gi|289595837|ref|YP_003482533.1|	-	0.0034	17.0	0.0	0.0056	16.4	0.0	1.4	1	0	0	1	1	1	1	RelB	antitoxin
ParG	PF09274.5	gi|289595837|ref|YP_003482533.1|	-	0.018	14.9	0.0	0.038	13.9	0.0	1.5	1	0	0	1	1	1	0	ParG
PqqD	PF05402.7	gi|289595837|ref|YP_003482533.1|	-	0.04	13.9	1.1	0.07	13.1	0.3	1.8	2	0	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF217	PF02697.9	gi|289595837|ref|YP_003482533.1|	-	0.075	13.2	0.6	0.17	12.1	0.1	1.8	2	0	0	2	2	2	0	Uncharacterized	ACR,	COG1753
DUF600	PF04634.7	gi|289595837|ref|YP_003482533.1|	-	0.11	12.5	0.8	0.21	11.5	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF600
zf-CHY	PF05495.7	gi|289595838|ref|YP_003482534.1|	-	0.0033	17.5	0.2	0.0042	17.1	0.1	1.1	1	0	0	1	1	1	1	CHY	zinc	finger
zf-HIT	PF04438.11	gi|289595838|ref|YP_003482534.1|	-	0.076	12.6	4.3	0.19	11.4	3.0	1.8	1	1	0	1	1	1	0	HIT	zinc	finger
DUF2655	PF10848.3	gi|289595838|ref|YP_003482534.1|	-	0.076	12.8	0.1	0.14	12.0	0.0	1.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2655)
Creatininase	PF02633.9	gi|289595839|ref|YP_003482535.1|	-	3.7e-54	183.3	0.0	4.2e-54	183.1	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
LTD	PF00932.14	gi|289595841|ref|YP_003482537.1|	-	1.5e-13	50.8	1.7	3.4e-13	49.7	1.2	1.5	1	0	0	1	1	1	1	Lamin	Tail	Domain
FtsX	PF02687.16	gi|289595841|ref|YP_003482537.1|	-	0.016	14.9	0.1	0.19	11.5	0.0	2.0	2	0	0	2	2	2	0	FtsX-like	permease	family
Baculo_11_kDa	PF06143.6	gi|289595841|ref|YP_003482537.1|	-	0.019	14.3	0.1	2.4	7.5	0.1	2.3	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF89	PF01937.14	gi|289595842|ref|YP_003482538.1|	-	7e-55	186.2	1.0	8.6e-55	185.9	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
UAF_Rrn10	PF05234.6	gi|289595842|ref|YP_003482538.1|	-	0.039	13.9	0.2	0.43	10.6	0.0	2.4	2	1	0	2	2	2	0	UAF	complex	subunit	Rrn10
Clathrin	PF00637.15	gi|289595842|ref|YP_003482538.1|	-	0.072	12.6	0.6	2.5	7.6	0.0	2.8	1	1	2	3	3	3	0	Region	in	Clathrin	and	VPS
Transglut_core	PF01841.14	gi|289595843|ref|YP_003482539.1|	-	1.3e-22	80.1	0.3	2.5e-22	79.1	0.2	1.5	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Iso_dh	PF00180.15	gi|289595844|ref|YP_003482540.1|	-	5e-96	321.6	0.0	6e-96	321.4	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
UPF0278	PF08745.6	gi|289595844|ref|YP_003482540.1|	-	0.047	12.9	0.0	0.091	11.9	0.0	1.5	1	0	0	1	1	1	0	UPF0278	family
bPH_6	PF10756.4	gi|289595845|ref|YP_003482541.1|	-	0.11	12.3	0.0	0.15	11.9	0.0	1.3	1	0	0	1	1	1	0	Bacterial	PH	domain
DUF4131	PF13567.1	gi|289595845|ref|YP_003482541.1|	-	0.17	11.2	5.1	0.28	10.5	3.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Radical_SAM	PF04055.16	gi|289595846|ref|YP_003482542.1|	-	4.1e-26	92.1	9.8	4.4e-25	88.7	6.8	2.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289595846|ref|YP_003482542.1|	-	8.8e-17	61.5	5.4	9.8e-16	58.1	3.7	2.3	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4	PF00037.22	gi|289595846|ref|YP_003482542.1|	-	1.5e-11	43.3	10.0	1.6e-06	27.4	1.2	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|289595846|ref|YP_003482542.1|	-	2e-10	40.7	10.9	5.6e-10	39.3	7.6	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289595846|ref|YP_003482542.1|	-	1.8e-08	34.5	10.8	1.8e-08	34.5	7.5	1.9	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289595846|ref|YP_003482542.1|	-	1.1e-07	31.3	11.6	5.1e-05	22.9	1.4	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_14	PF13394.1	gi|289595846|ref|YP_003482542.1|	-	3.7e-07	30.1	6.2	0.00023	21.1	0.9	2.5	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|289595846|ref|YP_003482542.1|	-	5.6e-07	30.2	6.0	0.00055	20.6	0.3	2.6	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|289595846|ref|YP_003482542.1|	-	6.6e-07	29.1	8.0	6.6e-07	29.1	5.6	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289595846|ref|YP_003482542.1|	-	2.5e-06	27.1	22.5	6.6e-05	22.6	8.9	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289595846|ref|YP_003482542.1|	-	1.4e-05	25.0	20.8	0.00053	19.9	9.2	2.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289595846|ref|YP_003482542.1|	-	4.2e-05	23.2	19.6	0.0007	19.3	1.0	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289595846|ref|YP_003482542.1|	-	0.0028	17.9	13.9	0.097	13.0	0.9	2.7	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
DUF3832	PF12909.2	gi|289595846|ref|YP_003482542.1|	-	0.0039	17.2	0.4	0.013	15.5	0.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3832)
Fer4_13	PF13370.1	gi|289595846|ref|YP_003482542.1|	-	0.0049	17.2	11.8	0.31	11.4	0.5	3.2	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|289595846|ref|YP_003482542.1|	-	0.0085	15.9	9.7	0.022	14.6	6.7	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289595846|ref|YP_003482542.1|	-	0.036	14.3	3.1	0.036	14.3	2.2	2.8	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289595846|ref|YP_003482542.1|	-	0.061	13.9	14.4	0.3	11.6	1.8	2.9	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|289595846|ref|YP_003482542.1|	-	0.26	11.9	23.5	0.17	12.5	3.4	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
PFL	PF02901.10	gi|289595847|ref|YP_003482543.1|	-	8.2e-213	708.4	0.0	1e-212	708.1	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	formate	lyase
Gly_radical	PF01228.16	gi|289595847|ref|YP_003482543.1|	-	2.4e-26	92.1	0.0	6.4e-26	90.7	0.0	1.8	1	0	0	1	1	1	1	Glycine	radical
DUF4125	PF13526.1	gi|289595848|ref|YP_003482544.1|	-	1.3e-37	129.0	8.1	1.6e-37	128.8	5.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4125)
DUF1904	PF08921.6	gi|289595848|ref|YP_003482544.1|	-	0.023	14.7	0.2	0.044	13.8	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1904)
Peptidase_M20	PF01546.23	gi|289595849|ref|YP_003482545.1|	-	1.5e-23	83.3	0.0	2.2e-23	82.7	0.0	1.3	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|289595849|ref|YP_003482545.1|	-	1.1e-13	50.9	0.0	2.1e-13	50.0	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M42	PF05343.9	gi|289595849|ref|YP_003482545.1|	-	5.1e-11	41.8	0.1	1.2e-05	24.2	0.0	3.1	3	0	0	3	3	3	3	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.12	gi|289595849|ref|YP_003482545.1|	-	7.6e-10	38.8	0.0	1.2e-07	31.6	0.0	2.1	2	0	0	2	2	2	2	Peptidase	family	M28
Ras_bdg_2	PF14847.1	gi|289595849|ref|YP_003482545.1|	-	0.12	12.2	0.0	0.28	11.1	0.0	1.6	1	0	0	1	1	1	0	Ras-binding	domain	of	Byr2
SBF	PF01758.11	gi|289595850|ref|YP_003482546.1|	-	1.4e-23	83.2	17.6	1.4e-23	83.2	12.2	2.8	1	1	1	2	2	2	2	Sodium	Bile	acid	symporter	family
ABC2_membrane	PF01061.19	gi|289595851|ref|YP_003482547.1|	-	8.5e-11	41.4	25.6	1.4e-10	40.6	17.7	1.2	1	0	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|289595851|ref|YP_003482547.1|	-	4.7e-07	29.1	25.6	4.7e-07	29.1	17.7	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|289595851|ref|YP_003482547.1|	-	0.071	11.9	16.6	0.037	12.8	7.8	2.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|289595851|ref|YP_003482547.1|	-	0.49	9.6	22.6	1.7	7.8	15.7	1.7	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|289595852|ref|YP_003482548.1|	-	8.8e-25	87.5	0.0	1.9e-24	86.4	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|289595852|ref|YP_003482548.1|	-	1.1e-13	51.8	0.0	1e-08	35.5	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|289595852|ref|YP_003482548.1|	-	5e-09	35.7	0.0	1.9e-07	30.5	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|289595852|ref|YP_003482548.1|	-	9.7e-06	25.0	0.2	2.2e-05	23.8	0.2	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|289595852|ref|YP_003482548.1|	-	7.2e-05	22.0	0.0	0.087	11.8	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|289595852|ref|YP_003482548.1|	-	0.00017	21.9	0.0	0.00031	21.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|289595852|ref|YP_003482548.1|	-	0.0011	17.5	0.0	0.21	10.0	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|289595852|ref|YP_003482548.1|	-	0.0026	17.5	0.1	2.2	7.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.17	gi|289595852|ref|YP_003482548.1|	-	0.003	17.0	0.8	0.0056	16.1	0.6	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.1	gi|289595852|ref|YP_003482548.1|	-	0.018	15.1	0.0	0.05	13.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|289595852|ref|YP_003482548.1|	-	0.025	13.7	0.0	0.2	10.7	0.0	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
DUF258	PF03193.11	gi|289595852|ref|YP_003482548.1|	-	0.029	13.5	0.0	0.053	12.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|289595852|ref|YP_003482548.1|	-	0.031	14.0	0.4	0.1	12.3	0.3	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_30	PF13604.1	gi|289595852|ref|YP_003482548.1|	-	0.048	13.2	0.2	0.14	11.7	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|289595852|ref|YP_003482548.1|	-	0.059	12.9	1.6	0.54	9.7	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|289595852|ref|YP_003482548.1|	-	0.095	12.3	0.0	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|289595852|ref|YP_003482548.1|	-	0.11	12.4	0.1	0.21	11.5	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF751	PF05421.6	gi|289595853|ref|YP_003482549.1|	-	0.66	10.2	3.9	0.85	9.9	2.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF751)
DUF1700	PF08006.6	gi|289595853|ref|YP_003482549.1|	-	3.7	6.7	6.2	3.9	6.7	4.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF973	PF06157.6	gi|289595853|ref|YP_003482549.1|	-	4.5	6.1	9.5	4.9	6.0	6.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
DUF4229	PF14012.1	gi|289595853|ref|YP_003482549.1|	-	7.1	6.6	8.0	10	6.1	5.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4229)
SHOCT	PF09851.4	gi|289595854|ref|YP_003482550.1|	-	9.1e-06	24.9	5.8	6.6e-05	22.2	3.3	2.5	2	0	0	2	2	2	1	Short	C-terminal	domain
HK97-gp10_like	PF04883.7	gi|289595854|ref|YP_003482550.1|	-	0.084	13.8	1.4	4.9	8.1	1.0	2.7	1	1	0	1	1	1	0	Bacteriophage	HK97-gp10,	putative	tail-component
ARD	PF03079.9	gi|289595854|ref|YP_003482550.1|	-	2.1	8.2	6.9	3.2	7.6	4.8	1.4	1	0	0	1	1	1	0	ARD/ARD'	family
HTH_20	PF12840.2	gi|289595855|ref|YP_003482551.1|	-	1.6e-08	34.1	0.1	4.1e-08	32.9	0.1	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289595855|ref|YP_003482551.1|	-	1.2e-06	28.0	0.1	2.1e-06	27.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|289595855|ref|YP_003482551.1|	-	0.0012	18.6	0.1	0.073	12.9	0.0	2.2	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|289595855|ref|YP_003482551.1|	-	0.0013	18.4	0.1	0.0018	17.9	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|289595855|ref|YP_003482551.1|	-	0.0017	17.9	0.1	0.0028	17.2	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_34	PF13601.1	gi|289595855|ref|YP_003482551.1|	-	0.0018	18.2	0.0	0.0028	17.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.4	gi|289595855|ref|YP_003482551.1|	-	0.002	18.1	0.0	0.003	17.6	0.0	1.4	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
SHOCT	PF09851.4	gi|289595855|ref|YP_003482551.1|	-	0.003	16.9	0.9	0.0075	15.7	0.6	1.8	1	0	0	1	1	1	1	Short	C-terminal	domain
HTH_45	PF14947.1	gi|289595855|ref|YP_003482551.1|	-	0.0031	17.2	0.0	0.0056	16.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
HxlR	PF01638.12	gi|289595855|ref|YP_003482551.1|	-	0.0044	16.6	0.1	0.0069	15.9	0.0	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|289595855|ref|YP_003482551.1|	-	0.0082	16.4	0.0	0.012	15.9	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
GvpG	PF05120.7	gi|289595855|ref|YP_003482551.1|	-	0.012	15.4	0.1	0.02	14.6	0.1	1.5	1	0	0	1	1	1	0	Gas	vesicle	protein	G
FeoC	PF09012.5	gi|289595855|ref|YP_003482551.1|	-	0.024	14.3	0.0	0.042	13.5	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
MarR_2	PF12802.2	gi|289595855|ref|YP_003482551.1|	-	0.027	14.1	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	MarR	family
DUF4423	PF14394.1	gi|289595855|ref|YP_003482551.1|	-	0.044	13.3	0.0	0.061	12.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Acetyltransf_1	PF00583.19	gi|289595856|ref|YP_003482552.1|	-	2.2e-20	72.4	0.0	3.3e-20	71.8	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|289595856|ref|YP_003482552.1|	-	6.1e-15	55.1	0.1	1.1e-14	54.3	0.1	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|289595856|ref|YP_003482552.1|	-	4.2e-14	52.6	0.0	4.7e-14	52.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|289595856|ref|YP_003482552.1|	-	2e-10	40.2	0.0	3.1e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.1	gi|289595856|ref|YP_003482552.1|	-	5.6e-10	39.3	0.4	6.7e-10	39.1	0.3	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|289595856|ref|YP_003482552.1|	-	9.9e-10	38.3	0.0	1.3e-09	38.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|289595856|ref|YP_003482552.1|	-	6.7e-07	29.3	0.0	8.4e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|289595856|ref|YP_003482552.1|	-	5.2e-05	23.4	0.1	6e-05	23.2	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
MOZ_SAS	PF01853.13	gi|289595856|ref|YP_003482552.1|	-	0.0048	16.1	0.0	0.0063	15.7	0.0	1.1	1	0	0	1	1	1	1	MOZ/SAS	family
Acetyltransf_CG	PF14542.1	gi|289595856|ref|YP_003482552.1|	-	0.0072	16.1	0.0	0.013	15.4	0.0	1.5	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
DUF2004	PF09406.5	gi|289595856|ref|YP_003482552.1|	-	0.03	14.3	0.5	0.77	9.8	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2004)
GDI	PF00996.13	gi|289595856|ref|YP_003482552.1|	-	0.041	12.2	0.1	0.05	11.9	0.0	1.1	1	0	0	1	1	1	0	GDP	dissociation	inhibitor
DUF3749	PF12568.3	gi|289595856|ref|YP_003482552.1|	-	0.075	12.6	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DNA_RNApol_7kD	PF03604.8	gi|289595857|ref|YP_003482553.1|	-	0.00025	20.4	3.4	0.0008	18.8	2.4	1.8	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1922	PF09082.5	gi|289595857|ref|YP_003482553.1|	-	0.00039	20.4	0.5	0.00042	20.3	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1922)
GFA	PF04828.9	gi|289595857|ref|YP_003482553.1|	-	0.13	12.2	0.5	4.5	7.2	0.0	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
DUF2072	PF09845.4	gi|289595857|ref|YP_003482553.1|	-	0.15	12.0	0.4	0.15	12.0	0.3	1.1	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_ribbon_recom	PF13408.1	gi|289595857|ref|YP_003482553.1|	-	0.16	12.2	3.8	13	6.1	2.7	2.0	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Ribosomal_L37ae	PF01780.14	gi|289595858|ref|YP_003482554.1|	-	3.2e-30	103.8	4.6	3.6e-30	103.6	3.2	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|289595858|ref|YP_003482554.1|	-	0.0005	19.8	3.5	0.0007	19.3	2.4	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|289595858|ref|YP_003482554.1|	-	0.0011	18.5	1.7	0.0018	17.9	1.2	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|289595858|ref|YP_003482554.1|	-	0.0046	16.2	0.5	0.0098	15.1	0.3	1.7	1	1	0	1	1	1	1	TFIIB	zinc-binding
DZR	PF12773.2	gi|289595858|ref|YP_003482554.1|	-	0.01	15.6	0.6	0.02	14.6	0.4	1.5	1	1	1	2	2	2	0	Double	zinc	ribbon
RRN7	PF11781.3	gi|289595858|ref|YP_003482554.1|	-	0.017	14.5	2.0	0.033	13.7	1.4	1.5	1	1	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Zn-ribbon_8	PF09723.5	gi|289595858|ref|YP_003482554.1|	-	0.036	14.0	2.0	0.23	11.4	0.2	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
RPA_interact_C	PF14768.1	gi|289595858|ref|YP_003482554.1|	-	0.055	13.8	0.1	0.071	13.5	0.1	1.2	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
DUF2719	PF10891.3	gi|289595858|ref|YP_003482554.1|	-	0.087	12.5	0.1	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2719)
zf-ISL3	PF14690.1	gi|289595858|ref|YP_003482554.1|	-	0.13	12.3	6.3	4.1	7.5	0.1	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
NOB1_Zn_bind	PF08772.6	gi|289595858|ref|YP_003482554.1|	-	0.23	11.3	2.1	0.25	11.2	0.3	1.8	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-ribbon_3	PF13248.1	gi|289595858|ref|YP_003482554.1|	-	0.24	10.6	1.4	9.4	5.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289595858|ref|YP_003482554.1|	-	0.4	10.4	3.5	5.2	6.9	0.0	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_2	PF13240.1	gi|289595858|ref|YP_003482554.1|	-	4.5	6.8	5.5	8.5	6.0	0.6	2.1	1	1	2	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289595858|ref|YP_003482554.1|	-	6.6	6.5	7.4	75	3.1	5.1	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-FPG_IleRS	PF06827.9	gi|289595858|ref|YP_003482554.1|	-	8	6.2	9.1	1	9.1	0.8	2.8	2	1	1	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
RNase_PH	PF01138.16	gi|289595859|ref|YP_003482555.1|	-	6.9e-27	94.3	0.0	9.9e-27	93.8	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|289595859|ref|YP_003482555.1|	-	8.7e-12	44.8	0.0	1.7e-11	43.8	0.0	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|289595860|ref|YP_003482556.1|	-	1e-33	116.4	0.0	1.4e-33	115.9	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|289595860|ref|YP_003482556.1|	-	1.4e-14	53.7	1.3	2.8e-14	52.8	0.9	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.24	gi|289595861|ref|YP_003482557.1|	-	7.2e-13	47.9	2.9	1.8e-12	46.7	2.0	1.8	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|289595861|ref|YP_003482557.1|	-	7.3e-08	31.8	0.4	2.9e-07	29.9	0.3	2.1	1	0	0	1	1	1	1	KH	domain
ECR1_N	PF14382.1	gi|289595861|ref|YP_003482557.1|	-	4.5e-06	25.8	0.0	8.4e-06	24.9	0.0	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.18	gi|289595861|ref|YP_003482557.1|	-	1.1e-05	25.4	0.1	4e-05	23.6	0.0	1.9	2	0	0	2	2	2	1	S1	RNA	binding	domain
KH_2	PF07650.12	gi|289595861|ref|YP_003482557.1|	-	0.0021	17.6	0.5	0.0047	16.4	0.2	1.8	1	1	0	1	1	1	1	KH	domain
SBDS	PF01172.13	gi|289595862|ref|YP_003482558.1|	-	8e-27	92.8	2.1	1.3e-26	92.2	1.4	1.3	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|289595862|ref|YP_003482558.1|	-	1.5e-22	79.6	0.0	2.7e-22	78.7	0.0	1.4	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
DUF3535	PF12054.3	gi|289595862|ref|YP_003482558.1|	-	0.12	10.9	0.4	0.18	10.4	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3535)
Proteasome	PF00227.21	gi|289595863|ref|YP_003482559.1|	-	2.1e-61	206.5	0.1	2.7e-61	206.1	0.0	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|289595863|ref|YP_003482559.1|	-	2.4e-14	52.3	0.1	5.2e-14	51.2	0.1	1.6	1	0	0	1	1	1	1	Proteasome	subunit	A	N-terminal	signature
PSD5	PF07637.6	gi|289595863|ref|YP_003482559.1|	-	0.013	15.4	0.7	0.61	10.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1595)
DUF3562	PF12085.3	gi|289595863|ref|YP_003482559.1|	-	0.18	11.6	0.9	11	5.9	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3562)
tRNA-synt_2d	PF01409.15	gi|289595864|ref|YP_003482560.1|	-	8.6e-97	323.1	0.0	1.2e-96	322.7	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|289595864|ref|YP_003482560.1|	-	8.7e-10	37.8	3.6	2.1e-05	23.4	0.1	3.6	3	1	1	4	4	4	3	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2b	PF00587.20	gi|289595864|ref|YP_003482560.1|	-	0.00031	20.3	2.6	0.0024	17.4	1.8	2.3	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
PGM_PMM_I	PF02878.11	gi|289595865|ref|YP_003482561.1|	-	9e-28	96.4	0.0	2.3e-27	95.1	0.0	1.7	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.11	gi|289595865|ref|YP_003482561.1|	-	1.3e-16	60.6	0.0	2.2e-16	59.8	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.11	gi|289595865|ref|YP_003482561.1|	-	1.7e-14	54.0	0.0	3.6e-14	52.9	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|289595865|ref|YP_003482561.1|	-	1.8e-07	31.0	0.0	4.3e-07	29.8	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Rep_fac_C	PF08542.6	gi|289595866|ref|YP_003482562.1|	-	9.2e-24	83.2	0.1	1.9e-23	82.2	0.0	1.6	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|289595866|ref|YP_003482562.1|	-	2.9e-17	63.0	0.0	5.3e-17	62.2	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|289595866|ref|YP_003482562.1|	-	8.9e-15	54.7	0.0	2e-12	47.0	0.0	2.4	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|289595866|ref|YP_003482562.1|	-	1.4e-11	43.7	0.0	5.3e-05	22.0	0.0	2.1	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|289595866|ref|YP_003482562.1|	-	3.6e-10	39.2	0.4	6.3e-09	35.2	0.0	2.9	1	1	1	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
DNA_pol3_delta	PF06144.8	gi|289595866|ref|YP_003482562.1|	-	7.1e-08	32.1	0.0	2.5e-07	30.3	0.0	1.7	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_14	PF13173.1	gi|289595866|ref|YP_003482562.1|	-	5.5e-07	29.5	0.0	1.4e-06	28.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|289595866|ref|YP_003482562.1|	-	6.4e-07	28.4	0.1	0.0006	18.6	0.0	2.4	1	1	1	2	2	2	2	TIP49	C-terminus
AAA_16	PF13191.1	gi|289595866|ref|YP_003482562.1|	-	1.8e-06	28.0	0.1	0.00013	22.0	0.0	2.5	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289595866|ref|YP_003482562.1|	-	1e-05	25.6	0.0	0.1	12.7	0.0	2.5	1	1	1	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289595866|ref|YP_003482562.1|	-	1.4e-05	25.2	0.0	4.7e-05	23.4	0.0	1.8	2	0	0	2	2	1	1	Sigma-54	interaction	domain
IstB_IS21	PF01695.12	gi|289595866|ref|YP_003482562.1|	-	0.00013	21.4	0.0	0.00023	20.6	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|289595866|ref|YP_003482562.1|	-	0.00034	20.3	0.0	0.00074	19.2	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_3	PF07726.6	gi|289595866|ref|YP_003482562.1|	-	0.00039	20.0	0.0	0.00067	19.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|289595866|ref|YP_003482562.1|	-	0.0004	19.6	0.0	0.025	13.7	0.0	2.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|289595866|ref|YP_003482562.1|	-	0.00046	20.9	0.3	0.0022	18.8	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|289595866|ref|YP_003482562.1|	-	0.00082	19.2	0.0	0.0015	18.4	0.0	1.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_2	PF07724.9	gi|289595866|ref|YP_003482562.1|	-	0.001	19.0	0.0	0.0075	16.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_18	PF13238.1	gi|289595866|ref|YP_003482562.1|	-	0.0011	19.2	0.0	0.0026	18.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
PhoH	PF02562.11	gi|289595866|ref|YP_003482562.1|	-	0.0024	17.1	0.0	0.013	14.7	0.0	2.0	2	0	0	2	2	2	1	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|289595866|ref|YP_003482562.1|	-	0.0042	16.5	0.0	0.72	9.3	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_5	PF07728.9	gi|289595866|ref|YP_003482562.1|	-	0.0044	16.7	0.0	0.033	13.8	0.0	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
FtsK_SpoIIIE	PF01580.13	gi|289595866|ref|YP_003482562.1|	-	0.0048	16.3	0.0	0.021	14.2	0.0	2.0	3	0	0	3	3	2	1	FtsK/SpoIIIE	family
AAA_25	PF13481.1	gi|289595866|ref|YP_003482562.1|	-	0.0048	16.3	0.0	0.019	14.3	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|289595866|ref|YP_003482562.1|	-	0.035	13.9	0.0	0.1	12.5	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
APS_kinase	PF01583.15	gi|289595866|ref|YP_003482562.1|	-	0.038	13.6	0.0	0.51	9.9	0.0	2.3	2	0	0	2	2	2	0	Adenylylsulphate	kinase
MobB	PF03205.9	gi|289595866|ref|YP_003482562.1|	-	0.057	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
T2SE	PF00437.15	gi|289595866|ref|YP_003482562.1|	-	0.06	12.2	0.0	0.11	11.4	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.13	gi|289595866|ref|YP_003482562.1|	-	0.097	12.1	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.1	gi|289595866|ref|YP_003482562.1|	-	0.098	12.6	0.1	0.19	11.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|289595866|ref|YP_003482562.1|	-	0.11	12.7	0.0	0.21	11.7	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_10	PF12846.2	gi|289595866|ref|YP_003482562.1|	-	0.12	11.8	0.1	0.8	9.0	0.0	2.3	1	1	0	1	1	1	0	AAA-like	domain
AAA_29	PF13555.1	gi|289595866|ref|YP_003482562.1|	-	0.13	11.8	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|289595866|ref|YP_003482562.1|	-	0.13	12.5	0.2	0.26	11.5	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|289595866|ref|YP_003482562.1|	-	0.15	10.9	0.0	0.27	10.1	0.0	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Abi	PF02517.11	gi|289595867|ref|YP_003482563.1|	-	7.6e-16	58.0	7.1	7.6e-16	58.0	4.9	2.3	2	1	0	2	2	2	1	CAAX	protease	self-immunity
Cytochrom_B_N_2	PF13631.1	gi|289595867|ref|YP_003482563.1|	-	0.12	12.1	9.2	0.33	10.7	6.4	1.8	1	1	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
DUF1275	PF06912.6	gi|289595867|ref|YP_003482563.1|	-	0.2	10.8	12.1	4.4	6.4	2.6	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1275)
DUF3792	PF12670.2	gi|289595867|ref|YP_003482563.1|	-	0.82	9.5	18.2	8.3	6.3	3.8	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3792)
PKD	PF00801.15	gi|289595868|ref|YP_003482564.1|	-	0.0092	15.7	0.4	0.044	13.5	0.2	2.2	2	0	0	2	2	2	1	PKD	domain
GtrA	PF04138.9	gi|289595870|ref|YP_003482566.1|	-	7.2e-17	61.4	18.5	1.2e-16	60.6	12.8	1.3	1	0	0	1	1	1	1	GtrA-like	protein
DUF4507	PF14964.1	gi|289595870|ref|YP_003482566.1|	-	0.027	13.2	0.0	0.037	12.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4507)
ApbA	PF02558.11	gi|289595871|ref|YP_003482567.1|	-	1.4e-29	102.5	0.5	3.7e-29	101.1	0.1	1.8	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
ApbA_C	PF08546.6	gi|289595871|ref|YP_003482567.1|	-	1.6e-23	83.0	0.1	2.8e-23	82.2	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
F420_oxidored	PF03807.12	gi|289595871|ref|YP_003482567.1|	-	3.7e-05	24.0	0.6	0.00016	22.0	0.2	2.2	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|289595871|ref|YP_003482567.1|	-	0.00012	21.8	0.2	0.00068	19.3	0.1	2.2	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
PBP_GOBP	PF01395.17	gi|289595871|ref|YP_003482567.1|	-	0.014	15.0	0.0	0.023	14.3	0.0	1.4	1	0	0	1	1	1	0	PBP/GOBP	family
ThiF	PF00899.16	gi|289595871|ref|YP_003482567.1|	-	0.041	13.6	0.9	1.7	8.4	0.1	3.0	3	0	0	3	3	3	0	ThiF	family
UDPG_MGDP_dh_N	PF03721.9	gi|289595871|ref|YP_003482567.1|	-	0.056	12.8	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ADSL_C	PF10397.4	gi|289595871|ref|YP_003482567.1|	-	0.082	12.9	0.1	0.28	11.2	0.0	1.9	2	0	0	2	2	2	0	Adenylosuccinate	lyase	C-terminus
DUF4656	PF15551.1	gi|289595871|ref|YP_003482567.1|	-	0.13	11.3	0.0	0.18	10.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4656)
GtrA	PF04138.9	gi|289595872|ref|YP_003482568.1|	-	3.5e-16	59.1	7.8	4.6e-16	58.8	5.2	1.3	1	1	0	1	1	1	1	GtrA-like	protein
DUF3948	PF13134.1	gi|289595872|ref|YP_003482568.1|	-	0.055	12.9	0.1	0.13	11.7	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3948)
SPC25	PF06703.6	gi|289595872|ref|YP_003482568.1|	-	0.092	12.3	0.0	0.18	11.3	0.0	1.5	1	0	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
DUF1129	PF06570.6	gi|289595872|ref|YP_003482568.1|	-	0.16	11.3	2.9	0.2	10.9	2.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF2768	PF10966.3	gi|289595872|ref|YP_003482568.1|	-	0.32	11.1	2.6	0.65	10.1	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2768)
TPR_1	PF00515.23	gi|289595873|ref|YP_003482569.1|	-	6.1e-40	133.2	30.9	4e-09	35.6	0.8	7.1	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289595873|ref|YP_003482569.1|	-	6.2e-37	122.5	27.9	3.4e-07	29.6	0.4	7.0	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289595873|ref|YP_003482569.1|	-	5.8e-36	121.9	23.4	2.9e-12	46.0	1.5	4.2	2	1	2	4	4	4	4	TPR	repeat
TPR_12	PF13424.1	gi|289595873|ref|YP_003482569.1|	-	6.2e-29	99.7	37.0	2.9e-09	36.7	2.6	4.7	1	1	5	6	6	6	5	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289595873|ref|YP_003482569.1|	-	2.2e-25	86.8	13.2	2.1e-06	27.8	0.4	6.9	1	1	6	7	7	7	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289595873|ref|YP_003482569.1|	-	5.2e-25	87.5	16.1	1e-11	45.1	0.0	4.9	2	1	3	5	5	5	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|289595873|ref|YP_003482569.1|	-	2.1e-24	83.6	19.3	8e-08	31.8	0.2	6.8	7	0	0	7	7	7	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289595873|ref|YP_003482569.1|	-	2.1e-24	83.4	29.9	1.5e-06	27.5	0.5	6.4	5	2	2	7	7	6	5	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289595873|ref|YP_003482569.1|	-	6.6e-22	77.6	19.8	5.2e-08	33.1	0.0	4.6	2	1	3	5	5	5	5	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289595873|ref|YP_003482569.1|	-	3.6e-21	75.1	43.5	2.2e-06	27.6	1.4	3.7	1	1	4	5	5	5	5	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.1	gi|289595873|ref|YP_003482569.1|	-	6.9e-18	63.8	17.8	0.00029	21.0	0.1	6.4	6	1	0	6	6	6	4	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289595873|ref|YP_003482569.1|	-	1e-14	54.1	11.7	3.4e-06	26.8	1.0	4.8	2	1	2	5	5	5	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289595873|ref|YP_003482569.1|	-	7.3e-14	50.3	17.2	0.0038	16.9	0.7	6.1	6	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|289595873|ref|YP_003482569.1|	-	7.5e-08	31.7	10.4	7.5e-08	31.7	7.2	2.1	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289595873|ref|YP_003482569.1|	-	1.5e-07	31.0	12.0	0.5	10.3	0.0	6.8	7	0	0	7	7	7	2	Tetratricopeptide	repeat
ChAPs	PF09295.5	gi|289595873|ref|YP_003482569.1|	-	1.5e-06	27.2	1.9	4.6e-06	25.6	0.1	2.1	1	1	1	2	2	2	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
TPR_20	PF14561.1	gi|289595873|ref|YP_003482569.1|	-	4.1e-06	26.8	10.3	0.12	12.5	0.8	4.9	1	1	2	5	5	5	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|289595873|ref|YP_003482569.1|	-	4e-05	23.4	23.9	1.2	9.0	0.1	6.9	3	3	4	7	7	7	2	Fis1	C-terminal	tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|289595873|ref|YP_003482569.1|	-	0.00011	21.5	7.2	0.0018	17.5	2.1	2.3	1	1	1	2	2	2	1	Coatomer	epsilon	subunit
NARP1	PF12569.3	gi|289595873|ref|YP_003482569.1|	-	0.00016	20.6	14.0	0.0065	15.2	4.7	3.0	1	1	2	3	3	3	3	NMDA	receptor-regulated	protein	1
FAT	PF02259.18	gi|289595873|ref|YP_003482569.1|	-	0.00061	18.8	4.9	0.21	10.5	0.9	2.7	1	1	1	2	2	2	2	FAT	domain
DUF3856	PF12968.2	gi|289595873|ref|YP_003482569.1|	-	0.0026	17.5	2.9	0.034	13.9	0.3	3.5	2	2	1	3	3	3	1	Domain	of	Unknown	Function	(DUF3856)
DUF3808	PF10300.4	gi|289595873|ref|YP_003482569.1|	-	0.0035	15.9	6.4	0.015	13.8	0.6	2.4	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3808)
Sigma70_r3	PF04539.11	gi|289595873|ref|YP_003482569.1|	-	0.022	14.6	2.9	1.5	8.7	1.4	2.8	2	0	0	2	2	2	0	Sigma-70	region	3
Apc5	PF12862.2	gi|289595873|ref|YP_003482569.1|	-	0.039	13.7	3.7	2.9	7.7	0.4	3.8	1	1	2	3	3	3	0	Anaphase-promoting	complex	subunit	5
HEAT_2	PF13646.1	gi|289595873|ref|YP_003482569.1|	-	0.051	13.8	1.1	0.16	12.2	0.1	2.2	2	1	0	2	2	2	0	HEAT	repeats
BTAD	PF03704.12	gi|289595873|ref|YP_003482569.1|	-	0.058	13.7	4.8	0.21	11.8	0.4	2.9	2	1	1	3	3	3	0	Bacterial	transcriptional	activator	domain
TPR_5	PF12688.2	gi|289595873|ref|YP_003482569.1|	-	0.077	13.0	2.1	0.69	9.9	0.0	2.9	2	1	1	3	3	3	0	Tetratrico	peptide	repeat
SHNi-TPR	PF10516.4	gi|289595873|ref|YP_003482569.1|	-	0.21	10.8	5.5	3.1	7.1	0.0	3.8	3	0	0	3	3	3	0	SHNi-TPR
DUF1064	PF06356.6	gi|289595873|ref|YP_003482569.1|	-	0.83	9.6	5.6	0.17	11.8	0.3	2.4	3	1	1	4	4	2	0	Protein	of	unknown	function	(DUF1064)
Lambda_Kil	PF06301.6	gi|289595873|ref|YP_003482569.1|	-	1.1	8.6	4.8	1.7	8.1	0.0	3.2	3	0	0	3	3	3	0	Bacteriophage	lambda	Kil	protein
PPR	PF01535.15	gi|289595873|ref|YP_003482569.1|	-	1.2	9.3	5.9	12	6.1	0.0	4.7	5	0	0	5	5	4	0	PPR	repeat
Sel1	PF08238.7	gi|289595873|ref|YP_003482569.1|	-	2	9.1	13.9	12	6.7	0.0	5.2	5	0	0	5	5	5	0	Sel1	repeat
Helicase_C_2	PF13307.1	gi|289595874|ref|YP_003482570.1|	-	5.6e-36	124.0	0.0	1.3e-35	122.8	0.0	1.5	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.10	gi|289595874|ref|YP_003482570.1|	-	1.8e-29	102.3	0.0	3.4e-29	101.4	0.0	1.5	1	0	0	1	1	1	1	DEAD_2
ResIII	PF04851.10	gi|289595874|ref|YP_003482570.1|	-	6.3e-09	35.9	0.7	3.5e-08	33.5	0.5	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|289595874|ref|YP_003482570.1|	-	1.1e-08	34.7	0.1	1.9e-07	30.7	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Terminase_6	PF03237.10	gi|289595874|ref|YP_003482570.1|	-	0.0073	15.1	0.0	0.013	14.2	0.0	1.4	1	0	0	1	1	1	1	Terminase-like	family
PhoH	PF02562.11	gi|289595874|ref|YP_003482570.1|	-	0.016	14.4	0.1	0.072	12.3	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
KaiC	PF06745.8	gi|289595874|ref|YP_003482570.1|	-	0.024	13.7	0.0	0.18	10.8	0.0	2.3	2	0	0	2	2	2	0	KaiC
AAA_30	PF13604.1	gi|289595874|ref|YP_003482570.1|	-	0.039	13.5	0.0	0.07	12.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|289595874|ref|YP_003482570.1|	-	0.043	12.7	0.0	0.094	11.6	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|289595874|ref|YP_003482570.1|	-	0.062	13.4	0.0	15	5.7	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
TIR_2	PF13676.1	gi|289595874|ref|YP_003482570.1|	-	0.085	13.0	0.0	0.2	11.8	0.0	1.6	1	0	0	1	1	1	0	TIR	domain
DEAD_assoc	PF08494.6	gi|289595875|ref|YP_003482571.1|	-	2.5e-56	190.4	0.1	5.5e-56	189.2	0.0	1.6	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|289595875|ref|YP_003482571.1|	-	3e-32	111.4	0.0	8.8e-32	109.9	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|289595875|ref|YP_003482571.1|	-	3.3e-13	49.2	0.0	6.1e-12	45.2	0.0	2.6	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|289595875|ref|YP_003482571.1|	-	7.1e-09	35.7	0.0	2e-08	34.2	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
TrmB	PF01978.14	gi|289595875|ref|YP_003482571.1|	-	4.1e-05	23.1	17.0	0.26	11.0	0.3	6.1	7	0	0	7	7	7	3	Sugar-specific	transcriptional	regulator	TrmB
SNF2_N	PF00176.18	gi|289595875|ref|YP_003482571.1|	-	0.0047	15.7	0.0	0.017	13.9	0.0	1.9	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
RPA_C	PF08784.6	gi|289595875|ref|YP_003482571.1|	-	0.085	13.2	0.0	0.84	10.0	0.0	2.5	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
HTH_9	PF08221.6	gi|289595875|ref|YP_003482571.1|	-	0.13	12.1	0.1	39	4.2	0.0	3.8	4	0	0	4	4	4	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Sigma70_r3	PF04539.11	gi|289595875|ref|YP_003482571.1|	-	0.15	11.9	0.5	4.9	7.1	0.1	2.8	2	0	0	2	2	2	0	Sigma-70	region	3
AAA_19	PF13245.1	gi|289595875|ref|YP_003482571.1|	-	0.27	11.0	0.0	0.69	9.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
SDH_alpha	PF03313.10	gi|289595876|ref|YP_003482572.1|	-	2.6e-65	220.2	9.4	3.4e-65	219.8	6.5	1.1	1	0	0	1	1	1	1	Serine	dehydratase	alpha	chain
SDH_beta	PF03315.10	gi|289595877|ref|YP_003482573.1|	-	1e-28	100.3	0.2	2.8e-27	95.7	0.1	2.2	1	1	0	1	1	1	1	Serine	dehydratase	beta	chain
Aconitase_C	PF00694.14	gi|289595878|ref|YP_003482574.1|	-	1.1e-15	57.8	0.5	6.4e-15	55.4	0.4	1.9	1	1	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|289595878|ref|YP_003482574.1|	-	5e-05	22.8	0.2	0.0035	16.7	0.2	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
DUF3006	PF11213.3	gi|289595878|ref|YP_003482574.1|	-	0.045	13.4	0.0	0.49	10.1	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3006)
EamA	PF00892.15	gi|289595879|ref|YP_003482575.1|	-	6.3e-37	126.4	42.7	1.6e-18	66.9	12.2	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|289595879|ref|YP_003482575.1|	-	2.3e-06	27.7	43.4	0.00087	19.4	6.3	3.9	1	1	2	3	3	3	2	Multidrug	resistance	efflux	transporter
FtsL	PF04999.8	gi|289595879|ref|YP_003482575.1|	-	0.35	10.6	5.3	0.37	10.5	0.3	2.8	2	1	0	2	2	2	0	Cell	division	protein	FtsL
UPF0546	PF10639.4	gi|289595879|ref|YP_003482575.1|	-	1.4	8.7	12.2	0.82	9.5	2.7	3.7	3	1	0	3	3	3	0	Uncharacterised	protein	family	UPF0546
SIR2	PF02146.12	gi|289595880|ref|YP_003482576.1|	-	4.7e-54	182.8	0.0	5.6e-54	182.5	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.17	gi|289595880|ref|YP_003482576.1|	-	0.00022	20.9	0.0	0.026	14.2	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	central	domain
Tetraspannin	PF00335.15	gi|289595881|ref|YP_003482577.1|	-	0.00036	19.8	1.1	0.00062	19.1	0.7	1.4	1	0	0	1	1	1	1	Tetraspanin	family
DUF4014	PF13198.1	gi|289595881|ref|YP_003482577.1|	-	0.001	19.4	4.8	0.001	19.4	3.3	3.2	2	2	1	3	3	3	1	Protein	of	unknown	function	(DUF4014)
Ndc1_Nup	PF09531.5	gi|289595881|ref|YP_003482577.1|	-	0.48	8.7	7.3	0.75	8.1	5.1	1.4	1	1	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
Claudin_3	PF06653.6	gi|289595881|ref|YP_003482577.1|	-	2	8.1	14.3	0.11	12.1	1.5	2.2	2	0	0	2	2	2	0	Tight	junction	protein,	Claudin-like
DUF4153	PF13687.1	gi|289595881|ref|YP_003482577.1|	-	3.4	7.1	20.2	8.3	5.8	14.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4153)
SdpI	PF13630.1	gi|289595881|ref|YP_003482577.1|	-	6.1	6.6	18.3	7.3	6.3	6.1	2.3	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
Yip1	PF04893.12	gi|289595881|ref|YP_003482577.1|	-	9.6	5.6	13.8	23	4.4	9.6	1.6	1	1	0	1	1	1	0	Yip1	domain
Pribosyltran_N	PF13793.1	gi|289595882|ref|YP_003482578.1|	-	1.9e-27	95.3	0.0	8.3e-24	83.5	0.0	2.3	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|289595882|ref|YP_003482578.1|	-	3.5e-16	59.0	0.3	1.1e-15	57.4	0.1	1.9	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|289595882|ref|YP_003482578.1|	-	3.4e-08	33.4	0.2	6.4e-08	32.5	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|289595882|ref|YP_003482578.1|	-	0.00099	18.3	0.0	0.0022	17.2	0.0	1.6	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|289595882|ref|YP_003482578.1|	-	0.0032	16.7	0.1	0.013	14.8	0.0	2.0	2	0	0	2	2	2	1	Phosphoribosyl	transferase
DUF1611	PF07755.6	gi|289595883|ref|YP_003482579.1|	-	8.5e-102	339.8	0.0	1e-101	339.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1611)
AAA_26	PF13500.1	gi|289595883|ref|YP_003482579.1|	-	0.0032	17.0	0.1	0.022	14.3	0.1	2.0	1	1	1	2	2	2	1	AAA	domain
DUF2101	PF09874.4	gi|289595884|ref|YP_003482580.1|	-	0.015	14.7	2.0	0.028	13.9	1.4	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2101)
Tyr-DNA_phospho	PF06087.7	gi|289595884|ref|YP_003482580.1|	-	0.06	11.9	0.2	0.082	11.5	0.1	1.1	1	0	0	1	1	1	0	Tyrosyl-DNA	phosphodiesterase
DUF1029	PF06269.7	gi|289595884|ref|YP_003482580.1|	-	0.37	10.8	2.6	10	6.1	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1029)
MR_MLE_C	PF13378.1	gi|289595885|ref|YP_003482581.1|	-	1e-24	86.6	0.1	5.5e-24	84.2	0.0	2.1	2	1	1	3	3	3	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|289595885|ref|YP_003482581.1|	-	1e-17	64.2	0.0	2e-17	63.2	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|289595885|ref|YP_003482581.1|	-	3.1e-14	53.2	0.0	9.7e-14	51.6	0.0	1.9	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MAAL_C	PF07476.6	gi|289595885|ref|YP_003482581.1|	-	0.0013	17.6	0.0	0.0027	16.6	0.0	1.4	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
DUF3970	PF13113.1	gi|289595885|ref|YP_003482581.1|	-	0.014	15.0	0.0	0.04	13.6	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3970)
GcpE	PF04551.9	gi|289595885|ref|YP_003482581.1|	-	0.025	13.3	0.1	0.058	12.1	0.0	1.6	2	0	0	2	2	2	0	GcpE	protein
IF3_C	PF00707.17	gi|289595885|ref|YP_003482581.1|	-	0.091	12.5	0.2	0.19	11.4	0.1	1.5	1	0	0	1	1	1	0	Translation	initiation	factor	IF-3,	C-terminal	domain
KH_1	PF00013.24	gi|289595885|ref|YP_003482581.1|	-	0.15	11.6	1.1	6.1	6.5	0.1	3.0	2	1	1	3	3	3	0	KH	domain
Tubulin	PF00091.20	gi|289595886|ref|YP_003482582.1|	-	2.5e-07	30.7	0.0	7.9e-07	29.1	0.0	1.7	1	1	1	2	2	2	1	Tubulin/FtsZ	family,	GTPase	domain
GCD14	PF08704.5	gi|289595887|ref|YP_003482583.1|	-	7.9e-29	100.8	0.0	2.7e-28	99.1	0.0	1.7	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_26	PF13659.1	gi|289595887|ref|YP_003482583.1|	-	1.1e-08	35.1	0.0	2.2e-08	34.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289595887|ref|YP_003482583.1|	-	1.6e-08	35.1	0.0	2.5e-08	34.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|289595887|ref|YP_003482583.1|	-	7.3e-05	22.3	0.0	9e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|289595887|ref|YP_003482583.1|	-	0.00022	20.8	0.0	0.00034	20.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|289595887|ref|YP_003482583.1|	-	0.00029	20.2	0.0	0.00068	19.0	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|289595887|ref|YP_003482583.1|	-	0.00039	20.0	0.0	0.0013	18.3	0.0	1.7	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
RrnaAD	PF00398.15	gi|289595887|ref|YP_003482583.1|	-	0.0028	16.7	0.0	0.004	16.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_11	PF08241.7	gi|289595887|ref|YP_003482583.1|	-	0.018	15.5	0.0	0.037	14.5	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
DUF1460	PF07313.7	gi|289595887|ref|YP_003482583.1|	-	0.068	12.3	0.0	0.29	10.3	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1460)
Methyltransf_16	PF10294.4	gi|289595887|ref|YP_003482583.1|	-	0.072	12.5	0.0	0.14	11.6	0.0	1.5	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_25	PF13649.1	gi|289595887|ref|YP_003482583.1|	-	0.12	12.7	0.0	0.21	11.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
SUI1	PF01253.17	gi|289595888|ref|YP_003482584.1|	-	1.8e-26	91.7	1.0	6.5e-26	89.9	0.6	1.7	1	1	1	2	2	2	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|289595888|ref|YP_003482584.1|	-	0.045	13.9	0.4	0.093	12.9	0.3	1.6	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DUF4222	PF13973.1	gi|289595888|ref|YP_003482584.1|	-	0.068	12.5	0.0	1.6	8.2	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4222)
Helicase_RecD	PF05127.9	gi|289595889|ref|YP_003482585.1|	-	1.1e-50	171.7	0.0	2.1e-50	170.8	0.0	1.5	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|289595889|ref|YP_003482585.1|	-	7.7e-50	168.9	0.0	6.3e-48	162.6	0.0	2.4	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|289595889|ref|YP_003482585.1|	-	3.3e-25	87.5	0.0	9.8e-24	82.8	0.0	2.9	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1726)
tRNA_bind_2	PF13725.1	gi|289595889|ref|YP_003482585.1|	-	5.7e-14	52.0	0.0	2.5e-13	50.0	0.0	2.0	2	0	0	2	2	2	1	Possible	tRNA	binding	domain
Acetyltransf_7	PF13508.1	gi|289595889|ref|YP_003482585.1|	-	0.00025	21.1	0.0	0.0011	19.0	0.0	2.2	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
AAA_30	PF13604.1	gi|289595889|ref|YP_003482585.1|	-	0.003	17.1	0.0	0.013	15.1	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|289595889|ref|YP_003482585.1|	-	0.045	14.0	0.5	0.17	12.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
ASCH	PF04266.9	gi|289595890|ref|YP_003482586.1|	-	7.7e-13	48.7	0.5	8.8e-13	48.5	0.3	1.0	1	0	0	1	1	1	1	ASCH	domain
RIG-I_C-RD	PF11648.3	gi|289595890|ref|YP_003482586.1|	-	0.018	14.9	0.1	0.019	14.8	0.0	1.2	1	0	0	1	1	1	0	C-terminal	domain	of	RIG-I
DUF3850	PF12961.2	gi|289595890|ref|YP_003482586.1|	-	0.022	14.6	1.0	0.04	13.9	0.3	1.7	1	1	1	2	2	2	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3850)
ELFV_dehydrog_N	PF02812.13	gi|289595891|ref|YP_003482587.1|	-	0.011	15.3	0.2	0.046	13.2	0.0	1.9	2	0	0	2	2	2	0	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
CBS	PF00571.23	gi|289595892|ref|YP_003482588.1|	-	1.2e-26	92.1	2.9	2.6e-14	52.7	0.1	2.2	2	0	0	2	2	2	2	CBS	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289595892|ref|YP_003482588.1|	-	4.1	7.2	5.5	19	5.1	3.8	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
V4R	PF02830.13	gi|289595893|ref|YP_003482589.1|	-	6.8e-11	41.8	0.0	9.3e-11	41.4	0.0	1.2	1	0	0	1	1	1	1	V4R	domain
Robl_LC7	PF03259.12	gi|289595894|ref|YP_003482590.1|	-	0.0053	16.2	0.0	0.006	16.1	0.0	1.1	1	0	0	1	1	1	1	Roadblock/LC7	domain
KH_1	PF00013.24	gi|289595894|ref|YP_003482590.1|	-	1.1	8.9	3.9	9.4	5.9	0.4	2.4	2	1	0	2	2	2	0	KH	domain
adh_short	PF00106.20	gi|289595895|ref|YP_003482591.1|	-	4.2e-33	114.6	0.0	5.4e-33	114.2	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|289595895|ref|YP_003482591.1|	-	4.7e-28	98.5	0.1	5.7e-28	98.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|289595895|ref|YP_003482591.1|	-	7.1e-16	58.3	0.0	9.3e-16	58.0	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|289595895|ref|YP_003482591.1|	-	2.3e-05	23.9	0.0	3.6e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Eno-Rase_NADH_b	PF12242.3	gi|289595895|ref|YP_003482591.1|	-	0.00043	20.0	1.0	0.00076	19.2	0.1	1.9	3	0	0	3	3	3	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
THF_DHG_CYH_C	PF02882.14	gi|289595895|ref|YP_003482591.1|	-	0.068	12.2	0.0	0.27	10.2	0.0	1.9	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Polysacc_synt_2	PF02719.10	gi|289595895|ref|YP_003482591.1|	-	0.1	11.4	0.0	0.14	10.9	0.0	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
DUF1776	PF08643.5	gi|289595895|ref|YP_003482591.1|	-	0.11	11.6	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
HAD_2	PF13419.1	gi|289595896|ref|YP_003482592.1|	-	2.1e-29	102.9	0.0	2.5e-29	102.7	0.0	1.0	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|289595896|ref|YP_003482592.1|	-	3.8e-15	56.9	0.1	2.2e-13	51.1	0.1	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|289595896|ref|YP_003482592.1|	-	7.5e-14	51.1	0.0	1.2e-13	50.5	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|289595896|ref|YP_003482592.1|	-	5.9e-10	39.6	0.1	7.8e-10	39.2	0.1	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|289595896|ref|YP_003482592.1|	-	0.0023	17.5	0.5	0.027	14.1	0.3	2.0	1	1	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
PNK3P	PF08645.6	gi|289595896|ref|YP_003482592.1|	-	0.0029	17.0	0.5	0.022	14.2	0.4	2.0	1	1	0	1	1	1	1	Polynucleotide	kinase	3	phosphatase
Put_Phosphatase	PF06888.7	gi|289595896|ref|YP_003482592.1|	-	0.0075	15.4	0.1	0.4	9.7	0.0	2.1	2	0	0	2	2	2	1	Putative	Phosphatase
Hydrolase_3	PF08282.7	gi|289595896|ref|YP_003482592.1|	-	0.017	14.7	1.2	0.11	12.0	0.1	2.2	2	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
NT5C	PF06941.7	gi|289595896|ref|YP_003482592.1|	-	0.044	13.2	0.1	0.13	11.7	0.0	1.8	1	1	1	2	2	2	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
PCMT	PF01135.14	gi|289595897|ref|YP_003482593.1|	-	1.3e-64	217.6	0.0	1.4e-64	217.4	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|289595897|ref|YP_003482593.1|	-	1.1e-07	32.4	0.0	1.6e-07	31.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|289595897|ref|YP_003482593.1|	-	6.5e-05	22.0	0.0	0.00014	20.9	0.0	1.5	2	0	0	2	2	2	1	O-methyltransferase
Methyltransf_31	PF13847.1	gi|289595897|ref|YP_003482593.1|	-	8e-05	22.2	0.0	0.00011	21.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|289595897|ref|YP_003482593.1|	-	0.00022	21.0	0.0	0.00029	20.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289595897|ref|YP_003482593.1|	-	0.00025	21.0	0.0	0.00038	20.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|289595897|ref|YP_003482593.1|	-	0.0025	16.9	0.0	0.0034	16.4	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.9	gi|289595897|ref|YP_003482593.1|	-	0.012	14.9	0.0	0.019	14.3	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|289595897|ref|YP_003482593.1|	-	0.021	15.3	0.0	0.035	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
GCD14	PF08704.5	gi|289595897|ref|YP_003482593.1|	-	0.08	12.4	0.0	0.097	12.1	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF3040	PF11239.3	gi|289595898|ref|YP_003482594.1|	-	0.016	15.2	1.6	0.042	13.9	1.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF4190	PF13828.1	gi|289595898|ref|YP_003482594.1|	-	0.034	13.6	10.0	0.034	13.6	6.9	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4190)
7tm_1	PF00001.16	gi|289595898|ref|YP_003482594.1|	-	0.045	12.8	0.2	0.084	11.9	0.0	1.4	1	1	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
DUF308	PF03729.8	gi|289595898|ref|YP_003482594.1|	-	0.12	12.4	17.1	0.13	12.2	7.5	2.4	2	0	0	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
DUF4064	PF13273.1	gi|289595898|ref|YP_003482594.1|	-	0.35	10.9	17.0	19	5.4	7.8	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF3592	PF12158.3	gi|289595898|ref|YP_003482594.1|	-	0.78	9.5	4.4	9.9	5.9	0.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3592)
SdpI	PF13630.1	gi|289595898|ref|YP_003482594.1|	-	1	9.1	17.4	2.3	7.9	0.1	2.2	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
Neurensin	PF14927.1	gi|289595898|ref|YP_003482594.1|	-	1.3	8.3	5.9	19	4.6	2.7	2.7	1	1	1	2	2	2	0	Neurensin
Trep_Strep	PF09605.5	gi|289595898|ref|YP_003482594.1|	-	2	8.0	12.2	3.2	7.3	8.4	1.3	1	1	0	1	1	1	0	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
DUF1749	PF08538.5	gi|289595899|ref|YP_003482595.1|	-	6.6e-15	54.7	0.0	1.1e-14	54.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1749)
Abhydrolase_6	PF12697.2	gi|289595899|ref|YP_003482595.1|	-	3.5e-12	46.7	0.0	4.9e-12	46.2	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|289595899|ref|YP_003482595.1|	-	1.3e-09	37.9	0.0	2.4e-09	37.1	0.0	1.4	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|289595899|ref|YP_003482595.1|	-	9.5e-06	25.3	0.0	0.0015	18.1	0.0	2.1	1	1	0	2	2	2	1	alpha/beta	hydrolase	fold
DLH	PF01738.13	gi|289595899|ref|YP_003482595.1|	-	0.0032	16.7	0.0	0.02	14.1	0.0	2.0	2	0	0	2	2	2	1	Dienelactone	hydrolase	family
PGAP1	PF07819.8	gi|289595899|ref|YP_003482595.1|	-	0.0064	16.1	0.0	0.01	15.4	0.0	1.3	1	0	0	1	1	1	1	PGAP1-like	protein
DUF4221	PF13970.1	gi|289595899|ref|YP_003482595.1|	-	0.021	14.1	0.4	0.032	13.5	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4221)
Ser_hydrolase	PF06821.8	gi|289595899|ref|YP_003482595.1|	-	0.03	13.9	0.0	0.064	12.8	0.0	1.5	2	0	0	2	2	2	0	Serine	hydrolase
DUF900	PF05990.7	gi|289595899|ref|YP_003482595.1|	-	0.034	13.4	0.1	0.25	10.6	0.1	2.0	1	1	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
DUF3530	PF12048.3	gi|289595899|ref|YP_003482595.1|	-	0.043	12.8	0.0	0.083	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3530)
Hydrolase_4	PF12146.3	gi|289595899|ref|YP_003482595.1|	-	0.046	13.5	0.1	0.12	12.2	0.0	1.8	1	1	0	1	1	1	0	Putative	lysophospholipase
DUF4342	PF14242.1	gi|289595899|ref|YP_003482595.1|	-	0.083	12.6	0.0	0.19	11.5	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4342)
DUF915	PF06028.6	gi|289595899|ref|YP_003482595.1|	-	0.11	11.5	0.0	0.22	10.6	0.0	1.4	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
HD	PF01966.17	gi|289595900|ref|YP_003482596.1|	-	7.5e-11	42.0	0.9	1.2e-10	41.4	0.6	1.3	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|289595900|ref|YP_003482596.1|	-	7.2e-05	22.1	0.1	0.0023	17.2	0.1	2.1	1	1	0	1	1	1	1	HDOD	domain
CMD	PF02627.15	gi|289595901|ref|YP_003482597.1|	-	3.1e-20	71.7	0.3	3.6e-20	71.5	0.2	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Pur_DNA_glyco	PF02245.11	gi|289595902|ref|YP_003482598.1|	-	6.5e-49	165.5	0.0	8e-49	165.2	0.0	1.1	1	0	0	1	1	1	1	Methylpurine-DNA	glycosylase	(MPG)
Sec61_beta	PF03911.11	gi|289595903|ref|YP_003482599.1|	-	7.2e-13	48.1	0.2	8.2e-13	47.9	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
YARHG	PF13308.1	gi|289595903|ref|YP_003482599.1|	-	0.0071	15.8	0.0	0.0072	15.8	0.0	1.1	1	0	0	1	1	1	1	YARHG	domain
PufQ	PF05398.6	gi|289595903|ref|YP_003482599.1|	-	0.13	12.3	0.1	0.16	12.0	0.1	1.3	1	0	0	1	1	1	0	PufQ	cytochrome	subunit
DUF650	PF04894.7	gi|289595904|ref|YP_003482600.1|	-	5.2e-82	275.3	0.0	6.6e-82	275.0	0.0	1.1	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|289595904|ref|YP_003482600.1|	-	2.2e-35	120.5	0.5	2.2e-35	120.5	0.3	1.6	2	0	0	2	2	2	1	Archaeal	protein	of	unknown	function	(DUF651)
tRNA_deacylase	PF04414.7	gi|289595905|ref|YP_003482601.1|	-	1.2e-67	227.1	0.4	1.4e-67	226.9	0.3	1.1	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
TPR_19	PF14559.1	gi|289595906|ref|YP_003482602.1|	-	1.9e-25	88.9	15.9	3.7e-06	27.1	0.0	7.2	4	2	3	7	7	7	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289595906|ref|YP_003482602.1|	-	1.2e-23	83.1	5.0	3.4e-07	30.7	0.3	7.0	5	1	3	8	8	8	4	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289595906|ref|YP_003482602.1|	-	3.6e-17	61.7	12.4	8.2e-07	28.5	0.2	6.2	6	1	1	7	7	7	4	TPR	repeat
TPR_14	PF13428.1	gi|289595906|ref|YP_003482602.1|	-	1.2e-15	56.5	5.7	0.018	15.5	0.1	8.8	4	1	6	10	10	10	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|289595906|ref|YP_003482602.1|	-	1.1e-11	43.9	12.5	0.02	15.0	0.0	6.5	6	1	1	7	7	7	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289595906|ref|YP_003482602.1|	-	1.7e-07	30.6	22.0	0.0024	17.6	0.0	8.5	10	0	0	10	10	9	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|289595906|ref|YP_003482602.1|	-	2.6e-06	26.8	21.9	6.1e-05	22.4	0.0	6.6	8	1	1	9	9	8	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289595906|ref|YP_003482602.1|	-	8.6e-05	22.6	2.3	4.7	7.4	0.0	4.9	4	1	0	5	5	5	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_8	PF13181.1	gi|289595906|ref|YP_003482602.1|	-	0.0001	21.8	24.3	0.14	11.9	0.0	8.3	8	1	0	8	8	8	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|289595906|ref|YP_003482602.1|	-	0.00052	19.9	11.6	1.9	8.4	0.1	5.2	5	1	1	6	6	6	3	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|289595906|ref|YP_003482602.1|	-	0.001	19.1	5.4	0.023	14.7	0.1	4.2	4	1	1	5	5	4	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289595906|ref|YP_003482602.1|	-	0.01	15.5	5.2	0.94	9.4	0.0	4.3	5	1	0	5	5	5	0	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|289595906|ref|YP_003482602.1|	-	0.02	13.9	2.4	0.25	10.3	1.2	2.9	1	1	1	2	2	2	0	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|289595906|ref|YP_003482602.1|	-	0.023	14.6	6.7	7.8	6.4	0.2	4.4	4	2	2	6	6	6	0	Tetratricopeptide	repeat
TRF	PF08558.5	gi|289595906|ref|YP_003482602.1|	-	3.6	6.8	8.2	3.4	6.9	0.0	3.0	3	1	0	4	4	4	0	Telomere	repeat	binding	factor	(TRF)
Nitroreductase	PF00881.19	gi|289595907|ref|YP_003482603.1|	-	2e-28	99.2	0.0	2.5e-28	98.9	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
RHH_1	PF01402.16	gi|289595908|ref|YP_003482604.1|	-	0.00012	21.8	0.0	0.00076	19.2	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
CheR_N	PF03705.10	gi|289595908|ref|YP_003482604.1|	-	0.058	12.7	0.1	0.41	10.0	0.0	2.0	2	0	0	2	2	2	0	CheR	methyltransferase,	all-alpha	domain
ATP-sulfurylase	PF01747.12	gi|289595909|ref|YP_003482605.1|	-	6.8e-92	306.6	0.0	1e-91	306.0	0.0	1.2	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|289595909|ref|YP_003482605.1|	-	2.3e-45	153.8	0.0	4.4e-45	152.9	0.0	1.5	1	0	0	1	1	1	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.7	gi|289595909|ref|YP_003482605.1|	-	0.00053	19.2	0.1	0.0011	18.1	0.1	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
DHH	PF01368.15	gi|289595910|ref|YP_003482606.1|	-	1.5e-07	31.1	0.1	3.1e-07	30.1	0.1	1.5	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|289595910|ref|YP_003482606.1|	-	0.0076	15.9	0.0	0.021	14.5	0.0	1.8	1	0	0	1	1	1	1	DHHA1	domain
THP2	PF09432.5	gi|289595910|ref|YP_003482606.1|	-	0.068	13.0	0.9	0.15	11.8	0.6	1.6	1	0	0	1	1	1	0	Tho	complex	subunit	THP2
Sulfotransfer_1	PF00685.22	gi|289595911|ref|YP_003482607.1|	-	2.8e-09	36.6	0.1	5.9e-08	32.3	0.1	2.5	1	1	0	1	1	1	1	Sulfotransferase	domain
Sulfotransfer_3	PF13469.1	gi|289595911|ref|YP_003482607.1|	-	0.12	13.3	0.0	0.23	12.4	0.0	1.6	1	1	0	1	1	1	0	Sulfotransferase	family
APS_kinase	PF01583.15	gi|289595912|ref|YP_003482608.1|	-	3.3e-57	192.5	0.0	3.9e-57	192.3	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.1	gi|289595912|ref|YP_003482608.1|	-	3.1e-11	43.3	0.0	3.5e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|289595912|ref|YP_003482608.1|	-	5.5e-09	35.6	0.0	6.4e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_18	PF13238.1	gi|289595912|ref|YP_003482608.1|	-	2e-07	31.3	0.2	3.7e-07	30.5	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289595912|ref|YP_003482608.1|	-	3.7e-06	27.7	0.2	5.8e-06	27.1	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|289595912|ref|YP_003482608.1|	-	0.00012	21.7	0.0	0.00033	20.3	0.0	1.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|289595912|ref|YP_003482608.1|	-	0.00058	19.6	0.0	0.0017	18.1	0.0	1.8	1	1	0	1	1	1	1	NTPase
ArgK	PF03308.11	gi|289595912|ref|YP_003482608.1|	-	0.0055	15.5	0.0	0.0084	14.9	0.0	1.3	1	0	0	1	1	1	1	ArgK	protein
Thymidylate_kin	PF02223.12	gi|289595912|ref|YP_003482608.1|	-	0.023	14.0	0.0	0.091	12.1	0.0	1.9	1	1	0	2	2	2	0	Thymidylate	kinase
SRP54	PF00448.17	gi|289595912|ref|YP_003482608.1|	-	0.03	13.7	0.0	0.045	13.1	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_28	PF13521.1	gi|289595912|ref|YP_003482608.1|	-	0.053	13.4	0.0	0.089	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CPT	PF07931.7	gi|289595912|ref|YP_003482608.1|	-	0.057	13.0	0.1	0.7	9.4	0.1	2.4	1	1	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
6PF2K	PF01591.13	gi|289595912|ref|YP_003482608.1|	-	0.071	12.1	0.0	0.1	11.6	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
ATP_bind_1	PF03029.12	gi|289595912|ref|YP_003482608.1|	-	0.14	11.6	0.0	0.23	10.9	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Na_sulph_symp	PF00939.14	gi|289595913|ref|YP_003482609.1|	-	4.7e-54	184.0	52.4	5.8e-54	183.7	36.3	1.1	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
CitMHS	PF03600.11	gi|289595913|ref|YP_003482609.1|	-	4e-14	51.9	58.0	7.3e-10	37.9	20.8	2.2	1	1	1	2	2	2	2	Citrate	transporter
Phosphodiest	PF01663.17	gi|289595915|ref|YP_003482611.1|	-	7.2e-43	147.3	0.1	9.6e-43	146.8	0.1	1.1	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DRAT	PF07357.6	gi|289595915|ref|YP_003482611.1|	-	0.026	13.7	0.2	0.041	13.0	0.2	1.2	1	0	0	1	1	1	0	Dinitrogenase	reductase	ADP-ribosyltransferase	(DRAT)
tRNA-synt_1c	PF00749.16	gi|289595915|ref|YP_003482611.1|	-	0.075	11.6	0.3	0.25	9.9	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
WbqC	PF08889.6	gi|289595916|ref|YP_003482612.1|	-	2.5e-80	269.0	0.1	2.8e-80	268.9	0.0	1.0	1	0	0	1	1	1	1	WbqC-like	protein	family
PIG-L	PF02585.12	gi|289595917|ref|YP_003482613.1|	-	1.4e-18	67.6	0.0	2e-18	67.1	0.0	1.2	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
Glyco_transf_4	PF13439.1	gi|289595917|ref|YP_003482613.1|	-	0.13	11.9	0.2	0.43	10.2	0.1	2.0	1	1	0	1	1	1	0	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|289595917|ref|YP_003482613.1|	-	0.14	12.0	0.2	0.26	11.1	0.1	1.6	1	1	0	1	1	1	0	Glycosyl	transferase	4-like
UDPG_MGDP_dh_N	PF03721.9	gi|289595918|ref|YP_003482614.1|	-	1.9e-47	161.0	0.0	3.6e-47	160.1	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.14	gi|289595918|ref|YP_003482614.1|	-	6.3e-25	87.2	0.0	1.3e-24	86.2	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.10	gi|289595918|ref|YP_003482614.1|	-	9.6e-22	77.1	0.0	3.2e-21	75.4	0.0	1.9	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.10	gi|289595918|ref|YP_003482614.1|	-	4.6e-10	39.5	0.0	2.9e-08	33.7	0.0	2.4	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|289595918|ref|YP_003482614.1|	-	1.5e-05	24.7	0.0	0.00098	18.8	0.0	2.3	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|289595918|ref|YP_003482614.1|	-	8.1e-05	22.1	0.0	0.074	12.4	0.0	2.3	2	0	0	2	2	2	2	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|289595918|ref|YP_003482614.1|	-	0.021	15.2	0.2	0.99	9.8	0.0	3.0	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|289595918|ref|YP_003482614.1|	-	0.027	14.4	1.1	0.36	10.8	0.0	3.0	4	1	0	4	4	4	0	TrkA-N	domain
3HCDH_N	PF02737.13	gi|289595918|ref|YP_003482614.1|	-	0.058	13.0	0.0	0.43	10.2	0.0	2.2	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|289595918|ref|YP_003482614.1|	-	0.086	13.1	0.2	4.3	7.6	0.0	2.7	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Hepatitis_core	PF00906.15	gi|289595918|ref|YP_003482614.1|	-	0.088	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Hepatitis	core	antigen
Glycos_transf_1	PF00534.15	gi|289595919|ref|YP_003482615.1|	-	2.6e-20	72.5	0.3	3.8e-20	72.0	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|289595919|ref|YP_003482615.1|	-	8.5e-15	55.2	0.0	1.4e-14	54.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_4	PF13692.1	gi|289595919|ref|YP_003482615.1|	-	4.4e-14	52.7	0.0	1.6e-13	50.9	0.0	1.9	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|289595919|ref|YP_003482615.1|	-	7.5e-13	48.5	0.2	1.7e-12	47.3	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.1	gi|289595919|ref|YP_003482615.1|	-	1.1e-09	38.2	0.0	1.8e-09	37.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|289595919|ref|YP_003482615.1|	-	3.6e-05	23.9	0.0	6.4e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|289595919|ref|YP_003482615.1|	-	0.0028	17.2	0.0	0.0045	16.5	0.0	1.5	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glycos_transf_4	PF00953.16	gi|289595920|ref|YP_003482616.1|	-	5.5e-35	120.5	10.7	5.5e-35	120.5	7.4	2.2	3	1	0	3	3	3	1	Glycosyl	transferase	family	4
LRR19-TM	PF15176.1	gi|289595920|ref|YP_003482616.1|	-	2.8	7.6	4.7	31	4.3	0.0	2.8	3	0	0	3	3	3	0	Leucine-rich	repeat	family	19	TM	domain
Glycos_transf_1	PF00534.15	gi|289595921|ref|YP_003482617.1|	-	1.7e-33	115.4	0.3	4.1e-33	114.2	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595921|ref|YP_003482617.1|	-	4.1e-18	65.8	0.0	1.2e-17	64.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|289595921|ref|YP_003482617.1|	-	5.2e-15	55.5	1.1	1.1e-14	54.4	0.8	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.1	gi|289595921|ref|YP_003482617.1|	-	2.5e-14	53.3	0.0	4.2e-14	52.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|289595921|ref|YP_003482617.1|	-	7.4e-13	48.5	0.0	3.8e-12	46.3	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|289595921|ref|YP_003482617.1|	-	3.4e-11	43.5	0.0	5e-11	42.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
DUF1972	PF09314.6	gi|289595921|ref|YP_003482617.1|	-	3.4e-09	36.4	0.3	4.9e-08	32.6	0.2	2.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1972)
SPASM	PF13186.1	gi|289595922|ref|YP_003482618.1|	-	1.4e-12	47.7	0.8	5.6e-12	45.8	0.5	2.1	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
Radical_SAM	PF04055.16	gi|289595922|ref|YP_003482618.1|	-	2.2e-10	40.9	0.6	2.9e-10	40.5	0.0	1.5	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289595922|ref|YP_003482618.1|	-	3.9e-06	26.8	0.0	1.3e-05	25.1	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|289595922|ref|YP_003482618.1|	-	6.5e-05	23.0	0.1	0.00029	20.9	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Pterin_4a	PF01329.14	gi|289595922|ref|YP_003482618.1|	-	1.1	9.0	4.9	0.17	11.6	0.2	2.1	2	1	1	3	3	3	0	Pterin	4	alpha	carbinolamine	dehydratase
Glycos_transf_1	PF00534.15	gi|289595923|ref|YP_003482619.1|	-	8e-36	123.0	0.0	1.9e-35	121.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595923|ref|YP_003482619.1|	-	6.9e-17	61.8	0.0	2.1e-16	60.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289595923|ref|YP_003482619.1|	-	7.8e-15	55.0	0.8	3.6e-14	52.8	0.2	2.2	2	1	1	3	3	3	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|289595923|ref|YP_003482619.1|	-	5.1e-13	49.4	0.0	7.5e-13	48.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|289595923|ref|YP_003482619.1|	-	3.9e-07	30.2	0.0	1.1e-06	28.8	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|289595923|ref|YP_003482619.1|	-	0.00023	20.9	3.0	0.0022	17.8	0.2	2.8	1	1	1	2	2	2	1	Glycosyl	transferase	4-like
Sulfotransfer_1	PF00685.22	gi|289595924|ref|YP_003482620.1|	-	2.8e-18	66.1	1.5	1.2e-17	64.0	1.0	1.9	1	1	0	1	1	1	1	Sulfotransferase	domain
Sulfotransfer_3	PF13469.1	gi|289595924|ref|YP_003482620.1|	-	1.1e-07	32.9	0.0	3.6e-07	31.2	0.0	1.8	1	1	0	1	1	1	1	Sulfotransferase	family
RVT_thumb	PF06817.9	gi|289595924|ref|YP_003482620.1|	-	0.03	13.8	0.1	0.084	12.4	0.0	1.7	1	0	0	1	1	1	0	Reverse	transcriptase	thumb	domain
Sulphotransf	PF09037.5	gi|289595924|ref|YP_003482620.1|	-	0.06	12.8	0.0	0.13	11.7	0.0	1.6	2	0	0	2	2	2	0	Stf0	sulphotransferase
DDE_Tnp_1	PF01609.16	gi|289595925|ref|YP_003482621.1|	-	7.5e-15	55.0	0.1	1.4e-14	54.1	0.1	1.4	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289595925|ref|YP_003482621.1|	-	0.0077	15.9	0.0	0.016	14.9	0.0	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
HTH_38	PF13936.1	gi|289595925|ref|YP_003482621.1|	-	0.071	12.6	0.5	0.21	11.1	0.4	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDE_Tnp_1_7	PF13843.1	gi|289595925|ref|YP_003482621.1|	-	0.099	11.6	0.0	0.18	10.7	0.0	1.4	1	1	0	1	1	1	0	Transposase	IS4
Glycos_transf_1	PF00534.15	gi|289595927|ref|YP_003482623.1|	-	1.9e-41	141.3	1.9	3.9e-41	140.3	0.3	2.2	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595927|ref|YP_003482623.1|	-	2.5e-13	50.3	0.0	4.9e-13	49.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|289595927|ref|YP_003482623.1|	-	1.6e-09	37.6	3.3	1.6e-09	37.6	2.3	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.1	gi|289595927|ref|YP_003482623.1|	-	4.8e-09	36.3	0.0	1.1e-08	35.2	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289595927|ref|YP_003482623.1|	-	1.7e-07	31.1	0.2	4.5e-07	29.7	0.1	1.8	2	1	1	3	3	3	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|289595927|ref|YP_003482623.1|	-	5.9e-06	26.5	0.0	7.9e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glycos_transf_2	PF00535.21	gi|289595928|ref|YP_003482624.1|	-	7.1e-22	77.8	1.4	3.9e-10	39.6	0.1	2.3	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|289595928|ref|YP_003482624.1|	-	2e-16	60.5	0.0	2.2e-09	37.4	0.0	2.1	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|289595928|ref|YP_003482624.1|	-	2.1e-05	24.2	0.0	3e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|289595928|ref|YP_003482624.1|	-	0.00038	19.7	0.0	0.00059	19.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glycos_transf_1	PF00534.15	gi|289595929|ref|YP_003482625.1|	-	3.5e-22	78.6	0.0	1.8e-21	76.3	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|289595929|ref|YP_003482625.1|	-	3.1e-12	46.5	0.0	5.5e-12	45.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595929|ref|YP_003482625.1|	-	3.4e-11	43.4	0.0	1e-10	41.8	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289595929|ref|YP_003482625.1|	-	5.4e-05	22.9	0.0	0.005	16.5	0.0	3.2	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
PP_kinase	PF02503.12	gi|289595929|ref|YP_003482625.1|	-	0.027	13.9	0.6	0.041	13.3	0.1	1.4	2	0	0	2	2	2	0	Polyphosphate	kinase	middle	domain
PS_pyruv_trans	PF04230.8	gi|289595930|ref|YP_003482626.1|	-	2.5e-36	125.8	10.5	2.5e-36	125.8	7.3	1.5	2	0	0	2	2	2	1	Polysaccharide	pyruvyl	transferase
Glycos_transf_N	PF04413.11	gi|289595930|ref|YP_003482626.1|	-	0.098	11.8	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	3-Deoxy-D-manno-octulosonic-acid	transferase	(kdotransferase)
YmzC	PF14157.1	gi|289595930|ref|YP_003482626.1|	-	4.3	7.2	9.0	3.6	7.4	0.6	2.6	2	0	0	2	2	2	0	YmzC-like	protein
Polysacc_synt	PF01943.12	gi|289595931|ref|YP_003482627.1|	-	1.8e-54	184.8	66.3	3.1e-52	177.5	28.9	2.0	1	1	1	2	2	2	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|289595931|ref|YP_003482627.1|	-	2.5e-13	50.0	10.3	2.5e-13	50.0	7.1	4.8	2	1	2	4	4	4	1	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.1	gi|289595931|ref|YP_003482627.1|	-	2.5e-09	36.9	44.6	6.7e-09	35.5	20.2	2.1	1	1	1	2	2	2	2	Polysaccharide	biosynthesis	protein
MatE	PF01554.13	gi|289595931|ref|YP_003482627.1|	-	3.8e-08	33.1	16.3	3.8e-08	33.1	11.3	3.5	2	1	1	3	3	3	1	MatE
MVIN	PF03023.9	gi|289595931|ref|YP_003482627.1|	-	0.026	12.9	37.4	0.05	12.0	25.9	1.5	1	0	0	1	1	1	0	MviN-like	protein
FUSC	PF04632.7	gi|289595931|ref|YP_003482627.1|	-	0.16	10.3	1.0	0.3	9.4	0.7	1.3	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
RmlD_sub_bind	PF04321.12	gi|289595932|ref|YP_003482628.1|	-	1.1e-91	306.6	0.0	1.2e-91	306.5	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|289595932|ref|YP_003482628.1|	-	2e-23	83.0	0.6	7.3e-23	81.2	0.4	1.8	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|289595932|ref|YP_003482628.1|	-	3.8e-09	35.8	3.8	7.7e-09	34.8	1.3	2.3	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|289595932|ref|YP_003482628.1|	-	4.6e-09	35.5	0.0	9.4e-09	34.5	0.0	1.5	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|289595932|ref|YP_003482628.1|	-	0.02	14.9	0.1	7.2	6.5	0.0	2.3	1	1	0	2	2	2	0	NADH(P)-binding
Semialdhyde_dh	PF01118.19	gi|289595932|ref|YP_003482628.1|	-	0.052	13.8	0.1	0.24	11.7	0.0	2.2	2	1	1	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
dTDP_sugar_isom	PF00908.12	gi|289595933|ref|YP_003482629.1|	-	1.6e-73	245.8	0.0	1.8e-73	245.6	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Epimerase	PF01370.16	gi|289595934|ref|YP_003482630.1|	-	8.6e-74	247.9	0.0	1.1e-73	247.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|289595934|ref|YP_003482630.1|	-	1.9e-23	82.8	0.0	2.3e-23	82.5	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|289595934|ref|YP_003482630.1|	-	1.9e-20	72.7	0.0	2.7e-20	72.2	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|289595934|ref|YP_003482630.1|	-	3.4e-18	65.5	0.0	1.2e-17	63.7	0.0	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|289595934|ref|YP_003482630.1|	-	5.8e-18	64.7	0.0	7.3e-17	61.1	0.0	2.0	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|289595934|ref|YP_003482630.1|	-	8.8e-07	29.0	0.0	1.3e-06	28.6	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|289595934|ref|YP_003482630.1|	-	0.002	18.0	0.0	0.0056	16.6	0.0	1.7	2	0	0	2	2	2	1	short	chain	dehydrogenase
NmrA	PF05368.8	gi|289595934|ref|YP_003482630.1|	-	0.014	14.6	0.0	0.03	13.5	0.0	1.5	1	0	0	1	1	1	0	NmrA-like	family
DOT1	PF08123.8	gi|289595934|ref|YP_003482630.1|	-	0.036	13.3	0.1	0.34	10.1	0.0	2.2	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
KR	PF08659.5	gi|289595934|ref|YP_003482630.1|	-	0.045	13.4	0.0	0.091	12.4	0.0	1.5	1	1	0	1	1	1	0	KR	domain
Saccharop_dh	PF03435.13	gi|289595934|ref|YP_003482630.1|	-	0.11	11.4	0.0	0.16	10.8	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
Ldh_1_N	PF00056.18	gi|289595934|ref|YP_003482630.1|	-	0.11	12.2	0.0	0.22	11.3	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
NTP_transferase	PF00483.18	gi|289595935|ref|YP_003482631.1|	-	1e-60	205.1	0.0	1.2e-60	204.8	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|289595935|ref|YP_003482631.1|	-	1.9e-06	28.0	0.0	2.4e-06	27.7	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Exosortase_EpsH	PF09721.5	gi|289595936|ref|YP_003482632.1|	-	2.9e-19	69.3	34.7	1.2e-18	67.2	23.9	1.8	1	1	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
DUF4258	PF14076.1	gi|289595937|ref|YP_003482633.1|	-	0.089	12.8	0.1	0.15	12.0	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4258)
DivIC	PF04977.10	gi|289595938|ref|YP_003482634.1|	-	0.0022	17.4	4.7	0.25	10.8	1.0	2.7	3	0	0	3	3	2	1	Septum	formation	initiator
DUF972	PF06156.8	gi|289595938|ref|YP_003482634.1|	-	0.0039	17.5	3.6	0.29	11.4	0.8	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF972)
Myosin_tail_1	PF01576.14	gi|289595938|ref|YP_003482634.1|	-	0.0048	14.7	2.5	0.0048	14.7	1.8	1.6	2	0	0	2	2	2	1	Myosin	tail
DUF1640	PF07798.6	gi|289595938|ref|YP_003482634.1|	-	0.0058	16.6	0.0	0.016	15.2	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1640)
DivIVA	PF05103.8	gi|289595938|ref|YP_003482634.1|	-	0.012	15.6	5.8	0.032	14.2	2.0	2.3	2	0	0	2	2	2	0	DivIVA	protein
DUF1664	PF07889.7	gi|289595938|ref|YP_003482634.1|	-	0.018	14.8	0.7	0.87	9.3	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
TMF_TATA_bd	PF12325.3	gi|289595938|ref|YP_003482634.1|	-	0.018	14.7	4.2	2.8	7.6	1.1	2.3	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
DUF4391	PF14335.1	gi|289595938|ref|YP_003482634.1|	-	0.024	14.0	2.2	0.1	11.9	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4391)
Lzipper-MIP1	PF14389.1	gi|289595938|ref|YP_003482634.1|	-	0.028	14.5	8.1	0.39	10.8	1.5	3.0	3	0	0	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
APG6	PF04111.7	gi|289595938|ref|YP_003482634.1|	-	0.033	13.2	3.6	0.2	10.6	1.8	2.0	2	0	0	2	2	2	0	Autophagy	protein	Apg6
Atg14	PF10186.4	gi|289595938|ref|YP_003482634.1|	-	0.035	13.0	1.6	0.13	11.1	0.5	1.9	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Cast	PF10174.4	gi|289595938|ref|YP_003482634.1|	-	0.054	11.5	3.3	0.13	10.2	0.4	2.0	2	0	0	2	2	2	0	RIM-binding	protein	of	the	cytomatrix	active	zone
CENP-F_leu_zip	PF10473.4	gi|289595938|ref|YP_003482634.1|	-	0.072	12.9	11.2	2.7	7.8	5.4	2.1	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Lipoprotein_7	PF01540.11	gi|289595938|ref|YP_003482634.1|	-	0.08	11.9	2.9	0.21	10.6	0.2	2.0	2	0	0	2	2	2	0	Adhesin	lipoprotein
Ax_dynein_light	PF10211.4	gi|289595938|ref|YP_003482634.1|	-	0.085	12.6	5.4	8.4	6.1	0.0	2.1	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
IncA	PF04156.9	gi|289595938|ref|YP_003482634.1|	-	0.092	12.3	3.6	1.5	8.3	1.1	2.1	2	0	0	2	2	2	0	IncA	protein
HALZ	PF02183.13	gi|289595938|ref|YP_003482634.1|	-	0.13	11.9	10.1	0.36	10.5	3.9	2.9	2	1	1	3	3	3	0	Homeobox	associated	leucine	zipper
NPV_P10	PF05531.7	gi|289595938|ref|YP_003482634.1|	-	0.14	12.3	1.4	13	6.1	0.1	2.4	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
TBPIP	PF07106.8	gi|289595938|ref|YP_003482634.1|	-	0.15	11.5	7.0	3.2	7.2	1.8	2.2	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF607	PF04678.8	gi|289595938|ref|YP_003482634.1|	-	0.21	11.5	1.4	0.3	11.0	0.4	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF607
Phage_GP20	PF06810.6	gi|289595938|ref|YP_003482634.1|	-	0.21	11.0	5.3	0.61	9.5	1.0	2.2	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
FlaC_arch	PF05377.6	gi|289595938|ref|YP_003482634.1|	-	0.23	11.3	9.0	2.7	7.9	0.3	2.9	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
Spc24	PF08286.6	gi|289595938|ref|YP_003482634.1|	-	0.36	10.5	4.6	4	7.1	0.9	2.2	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Tnp_P_element	PF12017.3	gi|289595938|ref|YP_003482634.1|	-	0.37	9.9	2.0	0.62	9.2	0.4	1.8	2	0	0	2	2	2	0	Transposase	protein
DUF4140	PF13600.1	gi|289595938|ref|YP_003482634.1|	-	0.39	11.1	1.7	3.5	8.1	0.7	2.1	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Kinetocho_Slk19	PF12709.2	gi|289595938|ref|YP_003482634.1|	-	0.39	10.8	8.1	0.34	11.0	3.1	2.2	2	0	0	2	2	2	0	Central	kinetochore-associated
Ribosomal_L29	PF00831.18	gi|289595938|ref|YP_003482634.1|	-	0.41	10.3	6.8	4	7.1	3.5	2.5	2	0	0	2	2	2	0	Ribosomal	L29	protein
BLOC1_2	PF10046.4	gi|289595938|ref|YP_003482634.1|	-	0.41	10.7	6.8	3.2	7.9	0.8	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CENP-H	PF05837.7	gi|289595938|ref|YP_003482634.1|	-	0.42	10.8	5.7	0.76	9.9	1.1	2.2	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
Baculo_PEP_C	PF04513.7	gi|289595938|ref|YP_003482634.1|	-	0.42	10.4	5.0	5	6.9	0.1	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
PCRF	PF03462.13	gi|289595938|ref|YP_003482634.1|	-	0.54	9.9	3.7	5.3	6.7	0.1	2.6	3	0	0	3	3	2	0	PCRF	domain
DUF3782	PF12644.2	gi|289595938|ref|YP_003482634.1|	-	0.62	9.8	4.8	0.58	9.9	1.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
Spc7	PF08317.6	gi|289595938|ref|YP_003482634.1|	-	0.64	8.6	6.3	1.6	7.3	1.4	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
Syntaxin	PF00804.20	gi|289595938|ref|YP_003482634.1|	-	0.64	10.2	4.5	6.6	6.9	0.2	2.3	2	0	0	2	2	2	0	Syntaxin
Hemagglutinin	PF00509.13	gi|289595938|ref|YP_003482634.1|	-	0.72	7.9	4.3	0.78	7.8	0.2	2.2	2	0	0	2	2	2	0	Haemagglutinin
Med9	PF07544.8	gi|289595938|ref|YP_003482634.1|	-	0.76	9.5	4.8	0.83	9.4	1.4	2.2	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
TSC22	PF01166.13	gi|289595938|ref|YP_003482634.1|	-	1.1	9.2	9.2	4	7.4	0.2	2.5	2	0	0	2	2	2	0	TSC-22/dip/bun	family
ORF6C	PF10552.4	gi|289595938|ref|YP_003482634.1|	-	1.4	8.6	6.0	1.2	8.8	0.2	2.4	2	0	0	2	2	2	0	ORF6C	domain
bZIP_1	PF00170.16	gi|289595938|ref|YP_003482634.1|	-	3.5	7.6	12.8	0.53	10.2	2.5	2.6	3	0	0	3	3	2	0	bZIP	transcription	factor
EF-hand_1	PF00036.27	gi|289595939|ref|YP_003482635.1|	-	0.04	13.2	1.7	0.074	12.3	0.1	1.9	2	0	0	2	2	2	0	EF	hand
Plasmid_stabil	PF05016.9	gi|289595940|ref|YP_003482636.1|	-	0.0013	19.0	0.3	0.0017	18.6	0.2	1.1	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
SPOR	PF05036.8	gi|289595940|ref|YP_003482636.1|	-	0.01	15.9	0.0	0.013	15.6	0.0	1.3	1	1	0	1	1	1	0	Sporulation	related	domain
Gp49	PF05973.9	gi|289595940|ref|YP_003482636.1|	-	0.026	14.5	0.1	0.032	14.2	0.0	1.1	1	0	0	1	1	1	0	Phage	derived	protein	Gp49-like	(DUF891)
DUF3713	PF12506.3	gi|289595940|ref|YP_003482636.1|	-	0.073	13.1	0.1	0.091	12.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3713)
DUF349	PF03993.7	gi|289595942|ref|YP_003482638.1|	-	0.046	13.8	0.3	0.059	13.5	0.2	1.2	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF349)
Pox_ATPase-GT	PF10640.4	gi|289595942|ref|YP_003482638.1|	-	0.06	12.1	0.5	0.068	11.9	0.3	1.0	1	0	0	1	1	1	0	mRNA	capping	enzyme	N-terminal,	ATPase	and	guanylyltransferase
PIN	PF01850.16	gi|289595943|ref|YP_003482639.1|	-	3.4e-17	62.8	0.5	4.1e-17	62.6	0.3	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|289595943|ref|YP_003482639.1|	-	0.0035	18.0	0.0	0.0039	17.8	0.0	1.4	1	1	0	1	1	1	1	PIN	domain
HAD_2	PF13419.1	gi|289595945|ref|YP_003482641.1|	-	1.3e-18	67.8	0.1	7.9e-18	65.2	0.1	1.9	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|289595945|ref|YP_003482641.1|	-	3.1e-11	44.1	0.1	2.6e-08	34.5	0.1	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|289595945|ref|YP_003482641.1|	-	8e-11	41.5	0.0	2.3e-10	40.0	0.0	1.7	2	0	0	2	2	2	1	HAD-hyrolase-like
HAD	PF12710.2	gi|289595945|ref|YP_003482641.1|	-	2e-07	31.3	0.1	2.7e-07	30.9	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|289595945|ref|YP_003482641.1|	-	0.00029	20.5	1.0	0.029	13.9	0.0	2.9	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|289595945|ref|YP_003482641.1|	-	0.017	14.4	0.0	0.24	10.6	0.0	2.2	2	0	0	2	2	2	0	Sucrose-6F-phosphate	phosphohydrolase
RPAP1_N	PF08621.5	gi|289595945|ref|YP_003482641.1|	-	0.024	14.2	2.1	0.056	13.0	1.0	2.0	1	1	1	2	2	2	0	RPAP1-like,	N-terminal
Acid_phosphat_B	PF03767.9	gi|289595945|ref|YP_003482641.1|	-	0.032	13.5	0.5	0.12	11.7	0.3	1.8	1	1	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
DUF2608	PF11019.3	gi|289595945|ref|YP_003482641.1|	-	0.036	13.0	0.0	0.052	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2608)
PGP_phosphatase	PF09419.5	gi|289595945|ref|YP_003482641.1|	-	0.036	13.4	0.1	0.59	9.4	0.0	2.3	2	1	0	2	2	2	0	Mitochondrial	PGP	phosphatase
Orbi_VP3	PF01700.11	gi|289595946|ref|YP_003482642.1|	-	0.015	12.7	0.2	0.016	12.6	0.1	1.0	1	0	0	1	1	1	0	Orbivirus	VP3	(T2)	protein
Glyco_hydro_98C	PF08307.6	gi|289595946|ref|YP_003482642.1|	-	0.075	12.3	0.1	0.075	12.3	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	98	C-terminal	domain
UDG	PF03167.14	gi|289595947|ref|YP_003482643.1|	-	3.5e-34	117.4	0.0	6.8e-34	116.5	0.0	1.4	2	0	0	2	2	2	1	Uracil	DNA	glycosylase	superfamily
NosD	PF05048.8	gi|289595948|ref|YP_003482644.1|	-	6.5e-14	51.6	61.9	2.6e-10	39.8	23.5	4.2	2	1	1	3	3	3	3	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289595948|ref|YP_003482644.1|	-	2.5e-05	24.0	27.4	2.5e-05	24.0	19.0	3.0	1	1	1	2	2	2	2	Right	handed	beta	helix	region
DUF912	PF06024.7	gi|289595948|ref|YP_003482644.1|	-	0.033	14.2	2.0	0.28	11.2	0.1	2.6	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
SSPI	PF14098.1	gi|289595948|ref|YP_003482644.1|	-	0.046	13.6	0.2	0.97	9.3	0.0	2.5	2	0	0	2	2	2	0	Small,	acid-soluble	spore	protein	I
PAP2	PF01569.16	gi|289595949|ref|YP_003482645.1|	-	1.4e-20	73.3	10.3	2.4e-20	72.5	7.2	1.4	1	0	0	1	1	1	1	PAP2	superfamily
DUF2628	PF10947.3	gi|289595949|ref|YP_003482645.1|	-	0.016	14.9	10.0	0.38	10.5	1.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2628)
PAP2_3	PF14378.1	gi|289595949|ref|YP_003482645.1|	-	0.045	13.2	5.2	1.2	8.5	3.6	2.1	1	1	0	1	1	1	0	PAP2	superfamily
DUF1761	PF08570.5	gi|289595949|ref|YP_003482645.1|	-	0.13	12.2	0.3	0.13	12.2	0.2	3.5	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1761)
Mg_trans_NIPA	PF05653.9	gi|289595949|ref|YP_003482645.1|	-	0.25	10.2	8.5	0.3	9.9	0.4	2.8	2	1	1	3	3	3	0	Magnesium	transporter	NIPA
S1FA	PF04689.8	gi|289595949|ref|YP_003482645.1|	-	0.4	10.5	4.2	2.2	8.2	0.1	2.3	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
PAP2_C	PF14360.1	gi|289595949|ref|YP_003482645.1|	-	3	8.1	10.6	0.57	10.5	1.3	2.4	2	0	0	2	2	2	0	PAP2	superfamily	C-terminal
Wzy_C	PF04932.10	gi|289595949|ref|YP_003482645.1|	-	9.2	6.0	13.8	0.79	9.4	4.6	2.2	1	1	1	2	2	2	0	O-Antigen	ligase
Methyltransf_21	PF05050.7	gi|289595950|ref|YP_003482646.1|	-	7.2e-14	52.0	0.0	9.9e-14	51.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|289595950|ref|YP_003482646.1|	-	0.00017	22.1	0.0	0.00028	21.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|289595950|ref|YP_003482646.1|	-	0.0012	18.5	0.0	0.0058	16.3	0.0	1.9	1	1	0	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.11	gi|289595950|ref|YP_003482646.1|	-	0.0072	15.9	0.0	0.0094	15.5	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|289595950|ref|YP_003482646.1|	-	0.033	13.3	0.0	0.049	12.7	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_22	PF13383.1	gi|289595950|ref|YP_003482646.1|	-	0.11	12.0	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Glycos_transf_2	PF00535.21	gi|289595951|ref|YP_003482647.1|	-	1.3e-22	80.2	0.0	2.4e-22	79.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|289595951|ref|YP_003482647.1|	-	1.9e-12	47.4	0.0	2.2e-10	40.7	0.0	2.3	1	1	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|289595951|ref|YP_003482647.1|	-	2.1e-05	23.7	0.1	7.8e-05	21.8	0.0	1.8	1	1	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|289595951|ref|YP_003482647.1|	-	0.0092	16.2	0.0	0.025	14.8	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
DUF2411	PF10304.4	gi|289595951|ref|YP_003482647.1|	-	0.024	14.1	0.1	0.063	12.8	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2411)
Glycos_transf_1	PF00534.15	gi|289595952|ref|YP_003482648.1|	-	3.9e-20	71.9	2.0	6.2e-20	71.3	0.6	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595952|ref|YP_003482648.1|	-	2e-12	47.4	0.0	3.3e-11	43.4	0.0	2.7	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Adeno_E4_ORF3	PF06931.6	gi|289595952|ref|YP_003482648.1|	-	0.036	14.1	0.1	0.37	10.8	0.0	2.3	2	0	0	2	2	2	0	Mastadenovirus	E4	ORF3	protein
PHB_acc_N	PF07879.6	gi|289595952|ref|YP_003482648.1|	-	0.19	11.5	1.7	0.44	10.3	1.2	1.6	1	0	0	1	1	1	0	PHB/PHA	accumulation	regulator	DNA-binding	domain
Glycos_transf_1	PF00534.15	gi|289595953|ref|YP_003482649.1|	-	1.6e-36	125.2	0.3	1e-35	122.7	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595953|ref|YP_003482649.1|	-	3.1e-15	56.5	0.0	1.4e-14	54.4	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|289595953|ref|YP_003482649.1|	-	5.9e-10	39.2	0.0	1.4e-09	38.0	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289595953|ref|YP_003482649.1|	-	0.0027	17.4	0.0	0.0052	16.5	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glycos_transf_1	PF00534.15	gi|289595954|ref|YP_003482650.1|	-	4.8e-20	71.6	0.0	9.9e-20	70.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289595954|ref|YP_003482650.1|	-	9.9e-13	48.4	0.0	3.8e-12	46.5	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289595954|ref|YP_003482650.1|	-	0.016	14.9	0.0	0.026	14.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
AA_permease_2	PF13520.1	gi|289595955|ref|YP_003482651.1|	-	2.1e-40	138.5	45.9	2.6e-40	138.2	31.8	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|289595955|ref|YP_003482651.1|	-	7.6e-31	106.9	39.9	1.3e-30	106.2	27.6	1.4	1	1	0	1	1	1	1	Amino	acid	permease
Trp_Tyr_perm	PF03222.8	gi|289595955|ref|YP_003482651.1|	-	6.3e-06	25.2	19.5	6.3e-06	25.2	13.5	1.8	2	0	0	2	2	2	1	Tryptophan/tyrosine	permease	family
Epimerase	PF01370.16	gi|289595956|ref|YP_003482652.1|	-	1.1e-53	182.0	0.0	2.1e-53	181.2	0.0	1.4	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|289595956|ref|YP_003482652.1|	-	3.3e-20	72.1	0.0	1.1e-19	70.4	0.0	1.7	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|289595956|ref|YP_003482652.1|	-	3.9e-17	62.0	0.7	1.1e-14	54.0	0.0	2.9	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|289595956|ref|YP_003482652.1|	-	5.5e-16	58.2	0.0	9.6e-14	50.8	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
3Beta_HSD	PF01073.14	gi|289595956|ref|YP_003482652.1|	-	2.7e-12	45.9	0.0	1.5e-11	43.5	0.0	1.9	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|289595956|ref|YP_003482652.1|	-	0.00015	21.8	0.0	0.00039	20.4	0.0	1.9	1	1	1	2	2	2	1	NADH(P)-binding
Epimerase_Csub	PF13950.1	gi|289595956|ref|YP_003482652.1|	-	0.00037	20.3	0.0	0.00069	19.5	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
adh_short	PF00106.20	gi|289595956|ref|YP_003482652.1|	-	0.018	14.9	0.0	0.48	10.3	0.0	2.4	2	0	0	2	2	2	0	short	chain	dehydrogenase
KR	PF08659.5	gi|289595956|ref|YP_003482652.1|	-	0.052	13.2	0.0	0.72	9.4	0.0	2.3	2	0	0	2	2	2	0	KR	domain
NTP_transferase	PF00483.18	gi|289595957|ref|YP_003482653.1|	-	5.4e-34	117.5	0.0	7.1e-34	117.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|289595957|ref|YP_003482653.1|	-	1.3e-21	75.0	24.0	1.7e-10	39.9	0.5	4.8	2	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|289595957|ref|YP_003482653.1|	-	2e-14	53.9	0.0	2.5e-14	53.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|289595957|ref|YP_003482653.1|	-	2.9e-08	33.1	0.2	2.9e-08	33.1	0.1	5.0	5	0	0	5	5	5	2	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|289595957|ref|YP_003482653.1|	-	0.00022	20.8	0.0	0.00033	20.2	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|289595957|ref|YP_003482653.1|	-	0.083	12.5	0.1	0.2	11.2	0.1	1.6	2	0	0	2	2	2	0	Cytidylyltransferase
A_deaminase	PF00962.17	gi|289595958|ref|YP_003482654.1|	-	9e-70	235.1	0.0	1e-69	234.9	0.0	1.0	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
IF2_N	PF04760.10	gi|289595958|ref|YP_003482654.1|	-	0.02	14.5	0.2	0.14	11.8	0.2	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Radical_SAM	PF04055.16	gi|289595958|ref|YP_003482654.1|	-	0.03	14.4	0.8	0.58	10.3	0.0	2.9	1	1	2	4	4	4	0	Radical	SAM	superfamily
F_bP_aldolase	PF01116.15	gi|289595958|ref|YP_003482654.1|	-	0.044	12.8	0.0	0.13	11.3	0.0	1.7	1	1	0	1	1	1	0	Fructose-bisphosphate	aldolase	class-II
PGM_PMM_I	PF02878.11	gi|289595959|ref|YP_003482655.1|	-	3e-27	94.8	0.0	6.5e-27	93.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|289595959|ref|YP_003482655.1|	-	5e-23	81.4	0.0	1.1e-22	80.3	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|289595959|ref|YP_003482655.1|	-	5.1e-16	58.7	0.0	9.3e-16	57.8	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|289595959|ref|YP_003482655.1|	-	8.2e-10	38.5	0.0	2.6e-09	36.9	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Dehydratase_LU	PF02286.10	gi|289595959|ref|YP_003482655.1|	-	0.14	10.3	0.0	0.2	9.8	0.0	1.2	1	0	0	1	1	1	0	Dehydratase	large	subunit
DUF2250	PF10007.4	gi|289595960|ref|YP_003482656.1|	-	9.7e-30	102.3	3.5	1.4e-29	101.8	2.4	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|289595960|ref|YP_003482656.1|	-	0.0014	18.2	0.1	0.0032	17.1	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|289595960|ref|YP_003482656.1|	-	0.007	15.9	0.1	0.013	15.0	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_9	PF08221.6	gi|289595960|ref|YP_003482656.1|	-	0.015	15.1	0.0	0.045	13.6	0.0	1.8	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Peptidase_S64	PF08192.6	gi|289595960|ref|YP_003482656.1|	-	0.025	12.9	0.9	0.027	12.8	0.6	1.1	1	0	0	1	1	1	0	Peptidase	family	S64
HTH_45	PF14947.1	gi|289595960|ref|YP_003482656.1|	-	0.041	13.7	0.8	0.27	11.0	0.2	2.5	2	1	0	2	2	2	0	Winged	helix-turn-helix
Phage_rep_org_N	PF09681.5	gi|289595960|ref|YP_003482656.1|	-	0.064	12.8	0.1	0.13	11.8	0.1	1.5	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
MarR_2	PF12802.2	gi|289595960|ref|YP_003482656.1|	-	0.085	12.5	0.0	0.13	11.9	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|289595960|ref|YP_003482656.1|	-	0.092	13.0	0.0	0.12	12.6	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Phage_rep_O	PF04492.8	gi|289595960|ref|YP_003482656.1|	-	0.12	12.6	0.1	21	5.4	0.0	2.2	2	0	0	2	2	2	0	Bacteriophage	replication	protein	O
PAS_6	PF08348.6	gi|289595960|ref|YP_003482656.1|	-	0.19	11.2	1.0	0.49	9.9	0.2	1.8	1	1	1	2	2	2	0	YheO-like	PAS	domain
UvsY	PF11056.3	gi|289595960|ref|YP_003482656.1|	-	0.35	10.9	3.9	7.5	6.6	0.1	2.8	2	1	0	3	3	3	0	Recombination,	repair	and	ssDNA	binding	protein	UvsY
SIS	PF01380.17	gi|289595961|ref|YP_003482657.1|	-	4.2e-54	181.6	1.1	2.3e-30	104.8	0.2	2.8	3	0	0	3	3	3	2	SIS	domain
GATase_6	PF13522.1	gi|289595961|ref|YP_003482657.1|	-	4.4e-26	91.4	0.0	8.7e-26	90.4	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|289595961|ref|YP_003482657.1|	-	1.3e-22	80.0	0.0	4.1e-17	61.9	0.0	2.8	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|289595961|ref|YP_003482657.1|	-	1.4e-21	76.4	0.0	2.7e-21	75.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|289595961|ref|YP_003482657.1|	-	7.1e-05	21.6	0.0	0.00012	20.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|289595961|ref|YP_003482657.1|	-	0.033	13.8	0.1	0.16	11.7	0.0	2.1	2	0	0	2	2	2	0	SIS	domain
Kdo_hydroxy	PF11004.3	gi|289595961|ref|YP_003482657.1|	-	0.087	11.8	0.0	0.15	11.0	0.0	1.3	1	0	0	1	1	1	0	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
Hexapep	PF00132.19	gi|289595962|ref|YP_003482658.1|	-	1.6e-23	81.0	26.1	7.4e-10	37.8	2.9	5.3	4	1	1	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transferase	PF00483.18	gi|289595962|ref|YP_003482658.1|	-	1.5e-21	76.8	0.0	1.9e-21	76.5	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|289595962|ref|YP_003482658.1|	-	1.5e-10	41.4	0.0	1.7e-10	41.2	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|289595962|ref|YP_003482658.1|	-	4.1e-10	39.0	36.4	5.2e-07	29.1	4.8	5.5	5	1	2	7	7	7	3	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|289595962|ref|YP_003482658.1|	-	0.0013	18.3	0.1	0.0033	16.9	0.0	1.7	2	0	0	2	2	2	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.7	gi|289595962|ref|YP_003482658.1|	-	1.4	7.4	3.6	0.89	8.0	0.3	2.1	2	1	1	3	3	3	0	L-fucokinase
TauE	PF01925.14	gi|289595963|ref|YP_003482659.1|	-	2e-47	161.7	33.3	2.4e-47	161.3	23.1	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF2834	PF11196.3	gi|289595963|ref|YP_003482659.1|	-	0.18	11.9	6.6	2	8.5	0.6	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2834)
UPF0016	PF01169.14	gi|289595963|ref|YP_003482659.1|	-	8.9	6.5	18.1	0.85	9.8	0.1	4.0	3	1	2	5	5	5	0	Uncharacterized	protein	family	UPF0016
Acetyltransf_3	PF13302.1	gi|289595964|ref|YP_003482660.1|	-	1.8e-21	76.8	0.2	2.6e-21	76.2	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|289595964|ref|YP_003482660.1|	-	7.6e-14	51.9	0.7	1.2e-13	51.2	0.5	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|289595964|ref|YP_003482660.1|	-	6.2e-07	29.3	0.0	1.1e-06	28.5	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_8	PF13523.1	gi|289595964|ref|YP_003482660.1|	-	0.0097	15.7	0.2	0.019	14.8	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
MobB	PF03205.9	gi|289595965|ref|YP_003482661.1|	-	6e-21	74.6	0.0	1.1e-20	73.7	0.0	1.5	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FeS	PF04060.8	gi|289595965|ref|YP_003482661.1|	-	2.3e-09	36.6	0.6	2.3e-09	36.6	0.4	2.4	3	0	0	3	3	3	1	Putative	Fe-S	cluster
cobW	PF02492.14	gi|289595965|ref|YP_003482661.1|	-	0.0039	16.6	0.0	0.0058	16.1	0.0	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|289595965|ref|YP_003482661.1|	-	0.0058	16.9	0.1	0.013	15.8	0.0	1.6	1	1	1	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|289595965|ref|YP_003482661.1|	-	0.033	14.1	0.0	0.055	13.4	0.0	1.5	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
MoeA_N	PF03453.12	gi|289595966|ref|YP_003482662.1|	-	7.2e-55	184.7	0.7	6.4e-54	181.6	0.1	2.4	3	0	0	3	3	3	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|289595966|ref|YP_003482662.1|	-	8.4e-25	86.8	0.0	1.3e-24	86.2	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|289595966|ref|YP_003482662.1|	-	2.7e-16	59.2	0.8	1.6e-15	56.7	0.0	2.7	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
DUF2200	PF09966.4	gi|289595967|ref|YP_003482663.1|	-	0.082	12.7	1.0	0.21	11.4	0.4	2.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2200)
DUF2407_C	PF13373.1	gi|289595967|ref|YP_003482663.1|	-	0.088	12.7	0.1	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	DUF2407	C-terminal	domain
MFS_1	PF07690.11	gi|289595968|ref|YP_003482664.1|	-	9.3e-49	166.0	51.6	1.3e-28	99.7	22.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|289595968|ref|YP_003482664.1|	-	5.6e-12	44.9	32.9	2.9e-06	26.1	9.5	2.4	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
Nuc_H_symport	PF03825.11	gi|289595968|ref|YP_003482664.1|	-	6.3e-05	21.9	24.9	0.00024	19.9	17.3	1.9	1	1	0	1	1	1	1	Nucleoside	H+	symporter
MFS_3	PF05977.8	gi|289595968|ref|YP_003482664.1|	-	0.0016	16.6	5.4	0.21	9.6	0.1	2.3	2	1	0	2	2	2	2	Transmembrane	secretion	effector
Pam17	PF08566.5	gi|289595968|ref|YP_003482664.1|	-	0.77	9.4	5.7	0.79	9.3	0.2	2.8	3	0	0	3	3	3	0	Mitochondrial	import	protein	Pam17
HD	PF01966.17	gi|289595969|ref|YP_003482665.1|	-	2.2e-07	30.9	2.7	2.2e-07	30.9	1.9	1.6	2	0	0	2	2	2	1	HD	domain
Nitro_FeMo-Co	PF02579.12	gi|289595970|ref|YP_003482666.1|	-	0.002	18.1	0.0	0.0027	17.7	0.0	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
FKBP_C	PF00254.23	gi|289595971|ref|YP_003482667.1|	-	2.8e-11	43.2	0.2	9.7e-11	41.5	0.1	2.1	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
AMIN	PF11741.3	gi|289595971|ref|YP_003482667.1|	-	0.093	12.7	0.9	3.7	7.5	0.5	2.5	2	0	0	2	2	2	0	AMIN	domain
DUF3823	PF12866.2	gi|289595971|ref|YP_003482667.1|	-	2.5	7.5	10.5	1.4e+02	1.8	7.3	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3823)
DUF381	PF04038.7	gi|289595972|ref|YP_003482668.1|	-	1.5e-23	82.6	1.5	2.2e-23	82.0	1.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF381)
DUF372	PF04036.7	gi|289595972|ref|YP_003482668.1|	-	5.8e-21	73.6	0.1	7.9e-21	73.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF372)
NTPase_1	PF03266.10	gi|289595973|ref|YP_003482669.1|	-	2e-54	183.7	2.9	2.3e-54	183.5	2.0	1.0	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.1	gi|289595973|ref|YP_003482669.1|	-	5.9e-05	23.2	0.1	9.3e-05	22.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF2478	PF10649.4	gi|289595973|ref|YP_003482669.1|	-	0.0001	21.6	0.0	0.00014	21.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2478)
AAA_14	PF13173.1	gi|289595973|ref|YP_003482669.1|	-	0.00067	19.5	2.6	0.015	15.2	1.8	2.1	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|289595973|ref|YP_003482669.1|	-	0.0011	17.8	0.4	0.0011	17.8	0.3	2.1	1	1	1	2	2	2	1	ArgK	protein
AAA_18	PF13238.1	gi|289595973|ref|YP_003482669.1|	-	0.0024	18.1	5.5	0.0056	16.9	3.8	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|289595973|ref|YP_003482669.1|	-	0.0025	17.4	1.5	0.012	15.2	0.8	2.0	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|289595973|ref|YP_003482669.1|	-	0.0042	16.5	3.9	0.11	11.8	2.7	2.5	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Pneumo_ncap	PF03246.8	gi|289595973|ref|YP_003482669.1|	-	0.014	13.9	2.0	0.38	9.2	0.0	2.0	1	1	1	2	2	2	0	Pneumovirus	nucleocapsid	protein
Bac_DnaA	PF00308.13	gi|289595973|ref|YP_003482669.1|	-	0.023	14.3	1.6	0.04	13.5	1.1	1.3	1	0	0	1	1	1	0	Bacterial	dnaA	protein
DUF3388	PF11868.3	gi|289595973|ref|YP_003482669.1|	-	0.032	13.3	5.1	0.48	9.5	0.6	2.6	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF3388)
cobW	PF02492.14	gi|289595973|ref|YP_003482669.1|	-	0.033	13.6	2.2	0.17	11.3	0.2	2.1	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|289595973|ref|YP_003482669.1|	-	0.041	13.6	2.0	0.88	9.2	0.1	2.5	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.9	gi|289595973|ref|YP_003482669.1|	-	0.053	13.2	1.9	0.19	11.4	0.1	2.1	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|289595973|ref|YP_003482669.1|	-	0.072	12.8	0.2	0.15	11.8	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|289595973|ref|YP_003482669.1|	-	0.12	13.1	6.4	0.48	11.2	4.4	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|289595973|ref|YP_003482669.1|	-	0.15	11.5	8.3	3.1	7.3	0.1	3.1	2	1	1	3	3	3	0	AAA	domain
AAA	PF00004.24	gi|289595973|ref|YP_003482669.1|	-	0.19	11.9	7.6	1.3	9.2	5.3	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_11	PF13086.1	gi|289595973|ref|YP_003482669.1|	-	0.2	11.1	2.3	1	8.8	0.1	2.2	1	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|289595973|ref|YP_003482669.1|	-	0.33	10.9	2.3	0.82	9.6	1.6	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
CbiA	PF01656.18	gi|289595973|ref|YP_003482669.1|	-	0.33	10.3	3.4	4.5	6.6	0.6	2.3	2	1	1	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
TRM	PF02005.11	gi|289595974|ref|YP_003482670.1|	-	1.1e-76	258.1	0.0	6.7e-59	199.7	0.0	2.0	1	1	1	2	2	2	2	N2,N2-dimethylguanosine	tRNA	methyltransferase
MTS	PF05175.9	gi|289595974|ref|YP_003482670.1|	-	5.5e-06	25.8	0.0	9.1e-06	25.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_16	PF10294.4	gi|289595974|ref|YP_003482670.1|	-	0.0017	17.8	0.0	0.003	17.0	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_26	PF13659.1	gi|289595974|ref|YP_003482670.1|	-	0.0079	16.2	0.0	0.012	15.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Dala_Dala_lig_N	PF01820.16	gi|289595974|ref|YP_003482670.1|	-	0.0089	16.3	0.1	0.021	15.1	0.0	1.6	1	0	0	1	1	1	1	D-ala	D-ala	ligase	N-terminus
TehB	PF03848.9	gi|289595974|ref|YP_003482670.1|	-	0.02	14.0	0.0	0.031	13.4	0.0	1.3	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Fe_dep_repress	PF01325.14	gi|289595974|ref|YP_003482670.1|	-	0.052	13.4	0.0	0.1	12.5	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Cons_hypoth95	PF03602.10	gi|289595974|ref|YP_003482670.1|	-	0.065	12.6	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Met_10	PF02475.11	gi|289595974|ref|YP_003482670.1|	-	0.09	12.3	0.1	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
PrmA	PF06325.8	gi|289595974|ref|YP_003482670.1|	-	0.12	11.4	0.3	0.18	10.8	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
POR	PF01558.13	gi|289595975|ref|YP_003482671.1|	-	5.3e-38	130.6	0.1	6.2e-38	130.4	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.22	gi|289595976|ref|YP_003482672.1|	-	7.7e-15	53.7	16.0	3.5e-08	32.7	3.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289595976|ref|YP_003482672.1|	-	2e-10	40.3	6.0	6e-05	22.7	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289595976|ref|YP_003482672.1|	-	1.3e-09	38.6	7.6	1.3e-05	25.8	0.7	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|289595976|ref|YP_003482672.1|	-	2.2e-09	37.0	7.4	3.7e-09	36.2	5.1	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289595976|ref|YP_003482672.1|	-	2.3e-09	36.7	15.3	4e-06	26.4	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289595976|ref|YP_003482672.1|	-	3.3e-09	36.9	9.2	9.5e-09	35.5	6.7	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289595976|ref|YP_003482672.1|	-	2.2e-08	33.5	13.1	0.00042	20.0	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|289595976|ref|YP_003482672.1|	-	3.9e-07	29.9	6.3	5.3e-07	29.5	4.4	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289595976|ref|YP_003482672.1|	-	7.1e-07	29.3	20.6	1.4e-05	25.2	8.1	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289595976|ref|YP_003482672.1|	-	0.00014	21.8	12.0	0.048	14.0	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289595976|ref|YP_003482672.1|	-	0.00046	20.6	6.7	0.039	14.5	0.5	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|289595976|ref|YP_003482672.1|	-	0.0027	18.0	9.9	0.015	15.6	6.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|289595976|ref|YP_003482672.1|	-	0.0053	17.1	11.7	0.017	15.4	0.8	2.6	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289595976|ref|YP_003482672.1|	-	0.014	15.8	11.5	0.23	11.8	1.4	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|289595976|ref|YP_003482672.1|	-	0.16	12.5	5.8	0.16	12.5	4.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NOB1_Zn_bind	PF08772.6	gi|289595976|ref|YP_003482672.1|	-	7.5	6.4	7.6	5.4	6.9	1.0	2.2	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
POR_N	PF01855.14	gi|289595977|ref|YP_003482673.1|	-	2.5e-67	226.7	0.9	3.4e-67	226.3	0.6	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|289595977|ref|YP_003482673.1|	-	8.5e-06	25.7	0.0	1.8e-05	24.6	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Cass2	PF14526.1	gi|289595977|ref|YP_003482673.1|	-	0.016	15.2	0.0	0.032	14.2	0.0	1.5	1	0	0	1	1	1	0	Integron-associated	effector	binding	protein
TPP_enzyme_N	PF02776.13	gi|289595977|ref|YP_003482673.1|	-	0.08	12.4	0.7	0.22	10.9	0.3	1.8	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
MoCF_biosynth	PF00994.19	gi|289595977|ref|YP_003482673.1|	-	0.11	11.9	0.1	6.2	6.2	0.0	2.4	2	0	0	2	2	2	0	Probable	molybdopterin	binding	domain
TPP_enzyme_C	PF02775.16	gi|289595978|ref|YP_003482674.1|	-	8.5e-23	80.6	0.3	1.6e-22	79.7	0.0	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|289595978|ref|YP_003482674.1|	-	0.011	14.7	0.6	0.052	12.4	0.2	1.9	1	1	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
DUF2064	PF09837.4	gi|289595978|ref|YP_003482674.1|	-	0.14	11.7	0.1	0.26	10.9	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
TPP_enzyme_C	PF02775.16	gi|289595979|ref|YP_003482675.1|	-	9e-30	103.2	0.1	7.1e-29	100.3	0.1	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|289595979|ref|YP_003482675.1|	-	5.5e-14	52.2	0.0	8.4e-14	51.6	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.22	gi|289595979|ref|YP_003482675.1|	-	3.9e-11	42.0	13.8	1.1e-07	31.1	3.3	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289595979|ref|YP_003482675.1|	-	1.8e-07	31.4	9.3	1.8e-07	31.4	6.4	2.2	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289595979|ref|YP_003482675.1|	-	2.1e-06	27.2	12.6	0.0066	16.3	2.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|289595979|ref|YP_003482675.1|	-	2.1e-06	27.3	19.3	8.2e-06	25.4	2.5	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289595979|ref|YP_003482675.1|	-	1.5e-05	24.7	9.7	3.5e-05	23.5	6.7	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289595979|ref|YP_003482675.1|	-	3.1e-05	23.7	7.8	6.7e-05	22.6	5.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Transket_pyr	PF02779.19	gi|289595979|ref|YP_003482675.1|	-	0.00026	20.5	0.2	0.59	9.5	0.1	2.4	2	1	0	2	2	2	2	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|289595979|ref|YP_003482675.1|	-	0.00028	20.8	0.0	0.00097	19.0	0.0	1.9	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Fer4_16	PF13484.1	gi|289595979|ref|YP_003482675.1|	-	0.0011	19.6	8.4	0.0041	17.8	0.6	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|289595979|ref|YP_003482675.1|	-	0.0013	18.7	7.1	0.0031	17.4	4.9	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289595979|ref|YP_003482675.1|	-	0.0021	18.2	11.2	0.014	15.6	7.0	2.5	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289595979|ref|YP_003482675.1|	-	0.011	16.2	8.6	0.048	14.2	1.1	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|289595979|ref|YP_003482675.1|	-	0.017	15.4	3.1	0.017	15.4	2.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|289595979|ref|YP_003482675.1|	-	0.053	13.4	4.4	0.15	11.9	3.0	1.8	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289595979|ref|YP_003482675.1|	-	0.21	11.9	9.8	18	5.7	6.9	2.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289595979|ref|YP_003482675.1|	-	0.4	11.1	6.0	0.76	10.2	0.6	2.8	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|289595979|ref|YP_003482675.1|	-	3.8	7.9	11.6	4.9	7.6	1.3	3.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|289595980|ref|YP_003482676.1|	-	4.2e-39	134.2	0.2	4.9e-39	133.9	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF1191	PF06697.7	gi|289595981|ref|YP_003482677.1|	-	5.1e-05	22.2	0.1	6.5e-05	21.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1191)
DUF4307	PF14155.1	gi|289595981|ref|YP_003482677.1|	-	0.019	14.7	1.9	0.29	10.9	0.3	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
DUF1214	PF06742.6	gi|289595981|ref|YP_003482677.1|	-	0.02	15.3	0.1	0.029	14.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1214)
Baculo_11_kDa	PF06143.6	gi|289595981|ref|YP_003482677.1|	-	0.024	14.0	3.3	0.36	10.2	0.1	2.3	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF4173	PF13777.1	gi|289595981|ref|YP_003482677.1|	-	0.088	12.0	1.4	0.84	8.8	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4173)
EphA2_TM	PF14575.1	gi|289595981|ref|YP_003482677.1|	-	0.099	13.0	3.0	1.9	8.9	0.0	2.3	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
Wzy_C	PF04932.10	gi|289595981|ref|YP_003482677.1|	-	0.1	12.3	1.5	0.84	9.3	0.1	2.1	2	0	0	2	2	2	0	O-Antigen	ligase
MORN_2	PF07661.8	gi|289595981|ref|YP_003482677.1|	-	0.15	12.1	1.3	3	8.1	0.0	3.0	3	0	0	3	3	2	0	MORN	repeat	variant
DUF3139	PF11337.3	gi|289595981|ref|YP_003482677.1|	-	0.2	11.9	4.9	0.92	9.8	1.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
DUF843	PF05814.6	gi|289595981|ref|YP_003482677.1|	-	0.27	11.0	2.2	0.9	9.3	0.3	2.2	2	0	0	2	2	2	0	Baculovirus	protein	of	unknown	function	(DUF843)
SPC25	PF06703.6	gi|289595981|ref|YP_003482677.1|	-	0.36	10.4	1.7	4.8	6.7	0.0	2.3	2	1	0	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
CbiN	PF02553.10	gi|289595981|ref|YP_003482677.1|	-	0.45	10.5	3.2	3.9	7.5	0.2	2.5	3	0	0	3	3	2	0	Cobalt	transport	protein	component	CbiN
AsmA	PF05170.9	gi|289595981|ref|YP_003482677.1|	-	0.54	8.8	5.6	0.24	9.9	0.5	2.0	2	0	0	2	2	2	0	AsmA	family
DUF2976	PF11190.3	gi|289595981|ref|YP_003482677.1|	-	0.98	8.9	7.7	0.75	9.3	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
DUF1700	PF08006.6	gi|289595981|ref|YP_003482677.1|	-	1.1	8.4	5.9	0.99	8.6	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1700)
DUF1312	PF07009.6	gi|289595981|ref|YP_003482677.1|	-	5.2	6.9	7.3	5.8	6.7	1.7	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1312)
Claudin_2	PF13903.1	gi|289595981|ref|YP_003482677.1|	-	6.8	6.3	10.0	1.5	8.4	0.8	2.2	1	1	0	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
Cas_Cas4	PF01930.12	gi|289595982|ref|YP_003482678.1|	-	7.4e-13	48.7	1.7	3.8e-10	39.9	0.2	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|289595982|ref|YP_003482678.1|	-	7.5e-13	48.4	0.1	6.3e-10	38.8	0.0	2.1	2	0	0	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
DUF3784	PF12650.2	gi|289595982|ref|YP_003482678.1|	-	0.0035	17.2	2.4	0.0035	17.2	1.6	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3784)
DUF2306	PF10067.4	gi|289595982|ref|YP_003482678.1|	-	0.0078	16.3	7.7	0.034	14.2	2.6	2.3	1	1	1	2	2	2	2	Predicted	membrane	protein	(DUF2306)
DUF1772	PF08592.6	gi|289595982|ref|YP_003482678.1|	-	0.18	11.5	3.4	0.24	11.1	1.8	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
DUF3278	PF11683.3	gi|289595982|ref|YP_003482678.1|	-	0.23	11.4	10.6	0.32	10.9	0.8	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3278)
Lactamase_B_3	PF13483.1	gi|289595983|ref|YP_003482679.1|	-	9.8e-31	106.6	0.0	1.2e-30	106.3	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|289595983|ref|YP_003482679.1|	-	9.1e-21	74.2	0.1	1.2e-20	73.9	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289595983|ref|YP_003482679.1|	-	6.3e-13	48.8	3.9	8.4e-12	45.1	2.7	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Orexin	PF02072.10	gi|289595983|ref|YP_003482679.1|	-	0.11	12.2	0.0	0.16	11.7	0.0	1.2	1	0	0	1	1	1	0	Prepro-orexin
DUF3198	PF11433.3	gi|289595984|ref|YP_003482680.1|	-	4.6e-16	58.4	6.9	6.2e-16	58.0	4.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3198)
DUF3901	PF13040.1	gi|289595984|ref|YP_003482680.1|	-	0.17	11.1	6.2	0.089	12.0	3.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3901)
ATPase_gene1	PF09527.5	gi|289595984|ref|YP_003482680.1|	-	6.1	6.7	13.6	0.12	12.2	4.3	1.8	2	0	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
PLDc_2	PF13091.1	gi|289595985|ref|YP_003482681.1|	-	1.1e-25	89.8	0.1	9.2e-13	48.0	0.0	2.4	2	0	0	2	2	2	2	PLD-like	domain
PLDc	PF00614.17	gi|289595985|ref|YP_003482681.1|	-	1.1e-05	25.0	0.8	0.04	13.7	0.1	2.6	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
LTD	PF00932.14	gi|289595985|ref|YP_003482681.1|	-	0.021	14.8	0.0	0.054	13.5	0.0	1.7	1	0	0	1	1	1	0	Lamin	Tail	Domain
Synapsin	PF02078.11	gi|289595985|ref|YP_003482681.1|	-	0.041	14.0	0.9	0.15	12.1	0.0	2.5	4	0	0	4	4	4	0	Synapsin,	N-terminal	domain
Spermine_synth	PF01564.12	gi|289595986|ref|YP_003482682.1|	-	8.9e-84	280.2	0.1	1.1e-83	279.8	0.1	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_18	PF12847.2	gi|289595986|ref|YP_003482682.1|	-	6.1e-05	23.5	0.0	0.0001	22.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|289595986|ref|YP_003482682.1|	-	0.00039	20.8	0.0	0.001	19.5	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289595986|ref|YP_003482682.1|	-	0.00042	19.9	0.0	0.00061	19.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|289595986|ref|YP_003482682.1|	-	0.0013	18.1	0.0	0.0019	17.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|289595986|ref|YP_003482682.1|	-	0.0096	15.9	0.0	0.016	15.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|289595986|ref|YP_003482682.1|	-	0.026	13.9	0.0	0.034	13.5	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.1	gi|289595986|ref|YP_003482682.1|	-	0.15	12.4	0.0	0.27	11.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
CarboxypepD_reg	PF13620.1	gi|289595987|ref|YP_003482683.1|	-	1.9e-37	127.1	36.9	2.9e-10	40.0	0.5	10.7	11	0	0	11	11	11	6	Carboxypeptidase	regulatory-like	domain
STT3	PF02516.9	gi|289595987|ref|YP_003482683.1|	-	1.3e-27	96.9	38.8	1.3e-27	96.9	26.9	1.7	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
DUF4480	PF13715.1	gi|289595987|ref|YP_003482683.1|	-	2.8e-16	59.3	45.7	2.7e-06	27.3	0.4	10.8	8	2	3	11	11	11	4	Domain	of	unknown	function	(DUF4480)
PMT_2	PF13231.1	gi|289595987|ref|YP_003482683.1|	-	4.8e-12	46.0	9.9	4.8e-12	46.0	6.8	4.5	5	0	0	5	5	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF1416	PF07210.7	gi|289595987|ref|YP_003482683.1|	-	1e-05	25.0	0.0	0.54	9.9	0.0	4.4	5	0	0	5	5	5	2	Protein	of	unknown	function	(DUF1416)
phage_tail_N	PF08400.5	gi|289595987|ref|YP_003482683.1|	-	1.5e-05	24.7	13.0	0.58	9.8	0.3	6.1	5	0	0	5	5	5	2	Prophage	tail	fibre	N-terminal
MG1	PF11974.3	gi|289595987|ref|YP_003482683.1|	-	0.0038	17.7	0.1	0.43	11.1	0.0	3.5	4	0	0	4	4	3	1	Alpha-2-macroglobulin	MG1	domain
Big_1	PF02369.11	gi|289595987|ref|YP_003482683.1|	-	0.0094	15.8	10.7	0.62	10.0	0.2	5.0	4	1	1	5	5	5	1	Bacterial	Ig-like	domain	(group	1)
DUF1735	PF08522.5	gi|289595987|ref|YP_003482683.1|	-	0.021	15.1	9.5	0.13	12.6	0.3	4.4	4	1	1	5	5	3	0	Domain	of	unknown	function	(DUF1735)
Pollen_Ole_e_I	PF01190.12	gi|289595987|ref|YP_003482683.1|	-	0.077	12.8	0.5	24	4.8	0.0	4.0	4	0	0	4	4	4	0	Pollen	proteins	Ole	e	I	like
Inhibitor_I36	PF03995.8	gi|289595987|ref|YP_003482683.1|	-	0.44	10.9	2.3	15	6.0	0.1	3.0	2	0	0	2	2	2	0	Peptidase	inhibitor	family	I36
DUF2116	PF09889.4	gi|289595987|ref|YP_003482683.1|	-	4.4	7.1	2.8	4	7.3	0.2	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
CARDB	PF07705.6	gi|289595988|ref|YP_003482684.1|	-	4.1e-09	36.4	0.7	8.1e-09	35.4	0.5	1.5	1	0	0	1	1	1	1	CARDB
DUF4139	PF13598.1	gi|289595988|ref|YP_003482684.1|	-	0.081	12.2	0.0	0.14	11.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4139)
CarboxypepD_reg	PF13620.1	gi|289595988|ref|YP_003482684.1|	-	0.092	12.8	0.0	0.3	11.1	0.0	1.8	1	0	0	1	1	1	0	Carboxypeptidase	regulatory-like	domain
EcoR124_C	PF12008.3	gi|289595989|ref|YP_003482685.1|	-	0.00039	19.6	0.7	0.00042	19.5	0.5	1.3	1	0	0	1	1	1	1	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
DUF460	PF04312.8	gi|289595990|ref|YP_003482686.1|	-	0.0081	15.6	0.0	0.017	14.6	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
Peptidase_M50	PF02163.17	gi|289595991|ref|YP_003482687.1|	-	3.9e-30	104.2	3.7	3.9e-30	104.2	2.6	2.2	2	1	0	2	2	2	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|289595991|ref|YP_003482687.1|	-	1.2e-09	37.9	0.0	0.00039	20.2	0.0	2.3	1	1	1	2	2	2	2	PDZ	domain
PDZ_1	PF12812.2	gi|289595991|ref|YP_003482687.1|	-	8.5e-07	28.7	0.1	0.0071	16.2	0.0	2.3	2	0	0	2	2	2	2	PDZ-like	domain
PDZ	PF00595.19	gi|289595991|ref|YP_003482687.1|	-	8.7e-06	25.8	0.0	0.005	17.0	0.0	2.5	1	1	1	2	2	2	2	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|289595991|ref|YP_003482687.1|	-	0.037	13.8	0.0	4.6	7.0	0.0	2.4	1	1	1	2	2	2	0	Tricorn	protease	PDZ	domain
Metallophos	PF00149.23	gi|289595993|ref|YP_003482689.1|	-	0.0016	17.8	1.9	0.0025	17.2	0.6	1.7	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|289595993|ref|YP_003482689.1|	-	0.0024	17.7	0.0	0.0032	17.3	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Abhydrolase_6	PF12697.2	gi|289595994|ref|YP_003482690.1|	-	3.8e-24	85.8	0.0	4.5e-24	85.5	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|289595994|ref|YP_003482690.1|	-	1.8e-21	76.4	0.0	2.2e-21	76.1	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|289595994|ref|YP_003482690.1|	-	5.8e-11	42.0	0.0	1.2e-10	41.0	0.0	1.5	1	0	0	1	1	1	1	Putative	lysophospholipase
Abhydrolase_1	PF00561.15	gi|289595994|ref|YP_003482690.1|	-	6.5e-08	32.4	0.0	0.00084	18.9	0.0	2.1	2	0	0	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.13	gi|289595994|ref|YP_003482690.1|	-	3.4e-07	29.9	0.0	5.4e-07	29.3	0.0	1.3	1	1	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Peptidase_S9	PF00326.16	gi|289595994|ref|YP_003482690.1|	-	1.7e-05	24.1	0.0	0.016	14.4	0.0	2.2	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
DUF1749	PF08538.5	gi|289595994|ref|YP_003482690.1|	-	2.1e-05	23.5	0.0	7.4e-05	21.7	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1749)
LCAT	PF02450.10	gi|289595994|ref|YP_003482690.1|	-	0.0075	15.2	0.0	0.014	14.3	0.0	1.4	1	0	0	1	1	1	1	Lecithin:cholesterol	acyltransferase
PAF-AH_p_II	PF03403.8	gi|289595994|ref|YP_003482690.1|	-	0.0076	14.5	0.0	0.014	13.7	0.0	1.4	1	0	0	1	1	1	1	Platelet-activating	factor	acetylhydrolase,	isoform	II
Abhydrolase_2	PF02230.11	gi|289595994|ref|YP_003482690.1|	-	0.0089	15.4	0.1	0.054	12.9	0.0	2.2	2	1	1	3	3	3	1	Phospholipase/Carboxylesterase
Abhydrolase_4	PF08386.5	gi|289595994|ref|YP_003482690.1|	-	0.0093	15.8	0.0	0.02	14.7	0.0	1.5	2	0	0	2	2	1	1	TAP-like	protein
Ser_hydrolase	PF06821.8	gi|289595994|ref|YP_003482690.1|	-	0.021	14.4	0.0	0.27	10.8	0.0	2.0	2	0	0	2	2	2	0	Serine	hydrolase
DUF676	PF05057.9	gi|289595994|ref|YP_003482690.1|	-	0.044	13.0	0.0	0.075	12.3	0.0	1.3	1	0	0	1	1	1	0	Putative	serine	esterase	(DUF676)
Lipase_3	PF01764.20	gi|289595994|ref|YP_003482690.1|	-	0.055	13.0	0.0	0.087	12.4	0.0	1.3	1	0	0	1	1	1	0	Lipase	(class	3)
AXE1	PF05448.7	gi|289595994|ref|YP_003482690.1|	-	0.072	11.5	0.0	0.47	8.9	0.0	1.9	2	0	0	2	2	2	0	Acetyl	xylan	esterase	(AXE1)
Abhydro_lipase	PF04083.11	gi|289595994|ref|YP_003482690.1|	-	0.14	11.5	0.0	11	5.5	0.0	2.3	2	0	0	2	2	2	0	Partial	alpha/beta-hydrolase	lipase	region
ATP-grasp_5	PF13549.1	gi|289595995|ref|YP_003482691.1|	-	6.1e-58	195.6	0.5	7.3e-58	195.3	0.3	1.0	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|289595995|ref|YP_003482691.1|	-	0.0031	16.9	0.3	0.0059	16.0	0.2	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
Ribosomal_L22	PF00237.14	gi|289595995|ref|YP_003482691.1|	-	0.095	12.6	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L22p/L17e
Succ_CoA_lig	PF13607.1	gi|289595996|ref|YP_003482692.1|	-	4.2e-53	178.6	0.7	5.5e-50	168.5	0.1	2.9	3	0	0	3	3	3	2	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|289595996|ref|YP_003482692.1|	-	1.1e-23	83.6	0.1	1.1e-22	80.3	0.0	2.6	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|289595996|ref|YP_003482692.1|	-	5e-12	46.1	2.7	1.8e-11	44.3	0.1	2.8	3	1	0	3	3	3	1	CoA	binding	domain
IFN-gamma	PF00714.12	gi|289595996|ref|YP_003482692.1|	-	0.086	12.6	0.0	0.26	11.1	0.0	1.7	1	0	0	1	1	1	0	Interferon	gamma
ATP-grasp_5	PF13549.1	gi|289595997|ref|YP_003482693.1|	-	2.2e-78	262.5	0.1	3.2e-78	261.9	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|289595997|ref|YP_003482693.1|	-	3.6e-47	159.4	0.3	2.8e-46	156.5	0.1	2.6	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|289595997|ref|YP_003482693.1|	-	1e-25	90.1	0.4	3.9e-25	88.2	0.1	2.2	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|289595997|ref|YP_003482693.1|	-	4.3e-20	72.0	0.2	1.1e-19	70.7	0.1	1.7	1	0	0	1	1	1	1	CoA	binding	domain
ATP-grasp_2	PF08442.5	gi|289595997|ref|YP_003482693.1|	-	2.9e-06	26.8	0.1	4.8e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|289595997|ref|YP_003482693.1|	-	0.00089	19.0	0.1	0.0022	17.7	0.0	1.6	2	0	0	2	2	2	1	ATP-grasp	domain
Aldolase_2	PF10120.4	gi|289595997|ref|YP_003482693.1|	-	0.018	14.4	0.1	3.7	6.8	0.0	2.6	2	0	0	2	2	2	0	Putative	aldolase
CPSase_L_D2	PF02786.12	gi|289595997|ref|YP_003482693.1|	-	0.085	12.1	0.1	0.17	11.1	0.1	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Voldacs	PF03517.8	gi|289595998|ref|YP_003482694.1|	-	0.031	14.1	0.0	0.032	14.0	0.0	1.0	1	0	0	1	1	1	0	Regulator	of	volume	decrease	after	cellular	swelling
YlaH	PF14036.1	gi|289595999|ref|YP_003482695.1|	-	0.66	10.1	12.7	0.69	10.0	8.8	1.1	1	0	0	1	1	1	0	YlaH-like	protein
DUF4366	PF14283.1	gi|289595999|ref|YP_003482695.1|	-	0.81	9.0	5.1	0.25	10.7	1.9	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4366)
RseC_MucC	PF04246.7	gi|289595999|ref|YP_003482695.1|	-	1.5	8.4	9.1	1.9	8.0	6.3	1.1	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF3488	PF11992.3	gi|289595999|ref|YP_003482695.1|	-	1.5	7.3	4.2	1.5	7.3	2.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3488)
Wzz	PF02706.10	gi|289595999|ref|YP_003482695.1|	-	4.1	7.2	10.8	1.8	8.4	6.1	1.4	1	1	0	1	1	1	0	Chain	length	determinant	protein
DUF4131	PF13567.1	gi|289595999|ref|YP_003482695.1|	-	5	6.5	9.7	5.4	6.3	6.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
O-antigen_lig	PF13425.1	gi|289595999|ref|YP_003482695.1|	-	5.6	6.9	12.7	5.9	6.8	8.8	1.1	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
PAS_9	PF13426.1	gi|289596000|ref|YP_003482696.1|	-	1.7e-09	37.9	0.0	8.2e-09	35.7	0.0	2.2	2	1	0	2	2	2	1	PAS	domain
PAS_4	PF08448.5	gi|289596000|ref|YP_003482696.1|	-	4.4e-07	29.8	0.0	6.6e-06	26.1	0.0	2.2	1	1	0	1	1	1	1	PAS	fold
GAF_3	PF13492.1	gi|289596000|ref|YP_003482696.1|	-	5.5e-07	29.7	0.0	5.1e-06	26.6	0.0	2.4	2	2	0	2	2	2	1	GAF	domain
PAS_8	PF13188.1	gi|289596000|ref|YP_003482696.1|	-	7.4e-07	28.8	0.0	6.1e-06	25.9	0.0	2.4	3	0	0	3	3	3	1	PAS	domain
PAS	PF00989.19	gi|289596000|ref|YP_003482696.1|	-	8.2e-07	28.8	0.0	2.6e-06	27.1	0.0	2.0	1	1	0	1	1	1	1	PAS	fold
GAF_2	PF13185.1	gi|289596000|ref|YP_003482696.1|	-	1.5e-05	25.4	0.0	2.8e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
HisKA	PF00512.20	gi|289596000|ref|YP_003482696.1|	-	0.00028	20.8	0.7	0.0026	17.6	0.0	2.7	3	0	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
GAF	PF01590.21	gi|289596000|ref|YP_003482696.1|	-	0.041	14.0	0.0	0.08	13.0	0.0	1.5	1	0	0	1	1	1	0	GAF	domain
CBS	PF00571.23	gi|289596001|ref|YP_003482697.1|	-	1.1e-21	76.3	0.6	9e-10	38.1	0.0	2.1	2	0	0	2	2	2	2	CBS	domain
Na_H_Exchanger	PF00999.16	gi|289596002|ref|YP_003482698.1|	-	1.1e-52	178.9	54.2	1.3e-52	178.6	37.6	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TauE	PF01925.14	gi|289596002|ref|YP_003482698.1|	-	0.00091	18.7	35.4	0.00091	18.7	24.5	2.3	2	1	0	2	2	2	1	Sulfite	exporter	TauE/SafE
Phosphodiest	PF01663.17	gi|289596003|ref|YP_003482699.1|	-	1.3e-17	64.1	0.3	3.1e-15	56.3	0.2	2.2	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|289596003|ref|YP_003482699.1|	-	0.11	12.0	0.0	7.6	6.1	0.0	2.3	2	0	0	2	2	2	0	PglZ	domain
Pro-kuma_activ	PF09286.6	gi|289596004|ref|YP_003482700.1|	-	3.5e-28	98.4	0.0	7.5e-28	97.3	0.0	1.6	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
fn3	PF00041.16	gi|289596004|ref|YP_003482700.1|	-	4.4e-24	84.4	19.7	1.8e-12	47.2	2.4	3.9	3	0	0	3	3	3	2	Fibronectin	type	III	domain
Tissue_fac	PF01108.12	gi|289596004|ref|YP_003482700.1|	-	0.00021	21.0	0.8	0.5	10.1	0.0	3.2	2	1	0	2	2	2	2	Tissue	factor
DUF4159	PF13709.1	gi|289596004|ref|YP_003482700.1|	-	0.016	14.3	0.0	0.03	13.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4159)
IMPDH	PF00478.20	gi|289596005|ref|YP_003482701.1|	-	5.8e-140	466.1	2.4	6.8e-140	465.9	1.7	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.23	gi|289596005|ref|YP_003482701.1|	-	9.2e-33	111.7	0.8	1.3e-15	56.8	0.0	2.6	2	0	0	2	2	2	2	CBS	domain
NMO	PF03060.10	gi|289596005|ref|YP_003482701.1|	-	2.2e-14	53.3	1.3	4.8e-09	35.8	1.2	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|289596005|ref|YP_003482701.1|	-	3.1e-10	39.4	5.3	2.8e-09	36.3	3.5	2.3	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|289596005|ref|YP_003482701.1|	-	2e-09	37.0	2.3	4.5e-09	35.9	1.6	1.5	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
G3P_antiterm	PF04309.7	gi|289596005|ref|YP_003482701.1|	-	0.00018	20.5	4.0	0.11	11.4	0.2	2.8	3	0	0	3	3	3	2	Glycerol-3-phosphate	responsive	antiterminator
ThiG	PF05690.9	gi|289596005|ref|YP_003482701.1|	-	0.00033	19.8	0.4	0.00033	19.8	0.3	2.4	3	0	0	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
DHO_dh	PF01180.16	gi|289596005|ref|YP_003482701.1|	-	0.00063	18.7	2.2	0.0007	18.6	0.3	1.9	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
EAL	PF00563.15	gi|289596005|ref|YP_003482701.1|	-	0.00086	18.8	0.2	0.0024	17.3	0.1	1.7	2	0	0	2	2	2	1	EAL	domain
DUF561	PF04481.7	gi|289596005|ref|YP_003482701.1|	-	0.0026	16.7	2.3	0.0069	15.3	0.2	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
Dus	PF01207.12	gi|289596005|ref|YP_003482701.1|	-	0.0026	16.6	0.2	0.019	13.7	0.0	2.1	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
Glu_synthase	PF01645.12	gi|289596005|ref|YP_003482701.1|	-	0.0035	16.3	2.8	0.0082	15.0	2.0	1.6	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
PcrB	PF01884.12	gi|289596005|ref|YP_003482701.1|	-	0.033	13.4	6.8	0.4	9.8	0.1	3.4	3	1	1	4	4	4	0	PcrB	family
Radical_SAM	PF04055.16	gi|289596005|ref|YP_003482701.1|	-	0.4	10.8	3.2	4.9	7.3	0.3	2.7	2	1	0	2	2	2	0	Radical	SAM	superfamily
BamHI	PF02923.10	gi|289596006|ref|YP_003482702.1|	-	0.048	13.5	0.0	0.057	13.3	0.0	1.1	1	0	0	1	1	1	0	Restriction	endonuclease	BamHI
DUF964	PF06133.6	gi|289596007|ref|YP_003482703.1|	-	4.1e-20	71.8	19.1	4.6e-20	71.6	13.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF964)
DUF1768	PF08719.6	gi|289596007|ref|YP_003482703.1|	-	0.086	12.5	3.8	0.12	12.1	2.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1768)
DUF3654	PF12376.3	gi|289596007|ref|YP_003482703.1|	-	0.24	11.2	9.1	1.4	8.6	6.3	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3654)
MCM_N	PF14551.1	gi|289596007|ref|YP_003482703.1|	-	1.6	9.2	4.5	2.2	8.7	2.9	1.4	1	1	0	1	1	1	0	MCM	N-terminal	domain
SPT16	PF08644.6	gi|289596007|ref|YP_003482703.1|	-	3.3	7.5	7.6	1.8	8.3	3.8	1.6	1	1	1	2	2	2	0	FACT	complex	subunit	(SPT16/CDC68)
Vma12	PF11712.3	gi|289596007|ref|YP_003482703.1|	-	5.1	6.7	7.2	8.7	6.0	5.0	1.6	1	1	0	1	1	1	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
EF-hand_like	PF09279.6	gi|289596007|ref|YP_003482703.1|	-	6.5	6.8	11.7	5.4	7.1	1.0	2.2	1	1	1	2	2	2	0	Phosphoinositide-specific	phospholipase	C,	efhand-like
Complex1_LYR_2	PF13233.1	gi|289596007|ref|YP_003482703.1|	-	8.3	6.9	9.3	70	3.9	6.1	2.0	1	1	1	2	2	2	0	Complex1_LYR-like
TPR_8	PF13181.1	gi|289596007|ref|YP_003482703.1|	-	9.4	6.2	7.9	1.6	8.6	0.7	2.8	2	1	0	2	2	2	0	Tetratricopeptide	repeat
IF-2B	PF01008.12	gi|289596008|ref|YP_003482704.1|	-	2.4e-89	299.0	0.1	2.7e-89	298.8	0.0	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Glycos_trans_3N	PF02885.12	gi|289596009|ref|YP_003482705.1|	-	6.1e-17	60.9	0.1	1.5e-16	59.7	0.1	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
PYNP_C	PF07831.8	gi|289596009|ref|YP_003482705.1|	-	5.1e-12	45.0	0.6	5.1e-12	45.0	0.4	2.1	2	0	0	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Glycos_transf_3	PF00591.16	gi|289596009|ref|YP_003482705.1|	-	2.1e-11	43.7	1.0	2.1e-10	40.4	0.1	2.5	2	0	0	2	2	2	1	Glycosyl	transferase	family,	a/b	domain
CDC48_N	PF02359.13	gi|289596009|ref|YP_003482705.1|	-	0.00056	19.8	0.4	0.0016	18.3	0.3	1.8	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
Molydop_binding	PF01568.16	gi|289596009|ref|YP_003482705.1|	-	0.0012	18.6	0.2	0.0072	16.1	0.1	2.1	1	1	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
TroA	PF01297.12	gi|289596010|ref|YP_003482706.1|	-	4.7e-39	134.1	0.1	5.9e-39	133.8	0.1	1.0	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
Phage_Gp14	PF10666.4	gi|289596010|ref|YP_003482706.1|	-	0.021	14.6	0.4	0.039	13.8	0.3	1.4	1	0	0	1	1	1	0	Phage	protein	Gp14
DUF1119	PF06550.6	gi|289596011|ref|YP_003482707.1|	-	9.8e-58	195.5	25.4	1.1e-57	195.2	17.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1119)
Topoisom_bac	PF01131.15	gi|289596012|ref|YP_003482708.1|	-	9.4e-119	396.8	2.0	1.2e-118	396.5	1.4	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.14	gi|289596012|ref|YP_003482708.1|	-	4.2e-18	64.5	23.4	1e-17	63.3	2.2	4.1	4	0	0	4	4	4	2	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim	PF01751.17	gi|289596012|ref|YP_003482708.1|	-	8e-16	57.8	0.0	2.1e-15	56.4	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
zf-ribbon_3	PF13248.1	gi|289596012|ref|YP_003482708.1|	-	1.7e-05	23.8	8.2	0.0016	17.5	0.2	3.6	3	0	0	3	3	3	2	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|289596012|ref|YP_003482708.1|	-	0.00034	20.2	8.4	0.98	9.1	0.1	3.9	3	1	0	3	3	3	2	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Auto_anti-p27	PF06677.7	gi|289596012|ref|YP_003482708.1|	-	0.0004	20.0	10.7	0.11	12.2	0.1	3.5	3	0	0	3	3	3	2	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_2	PF13240.1	gi|289596012|ref|YP_003482708.1|	-	0.06	12.8	11.9	0.26	10.8	0.1	4.3	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-IS66	PF13005.2	gi|289596012|ref|YP_003482708.1|	-	0.085	12.8	3.5	23	5.0	0.1	3.8	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
DZR	PF12773.2	gi|289596012|ref|YP_003482708.1|	-	0.12	12.1	8.7	2.8	7.8	0.4	2.6	2	0	0	2	2	2	0	Double	zinc	ribbon
Zn_ribbon_recom	PF13408.1	gi|289596012|ref|YP_003482708.1|	-	0.13	12.5	23.1	0.034	14.4	1.3	4.1	4	0	0	4	4	3	0	Recombinase	zinc	beta	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|289596012|ref|YP_003482708.1|	-	0.23	10.8	4.7	12	5.2	0.0	3.6	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-FPG_IleRS	PF06827.9	gi|289596012|ref|YP_003482708.1|	-	1.2	8.8	7.4	5.3	6.7	0.0	3.5	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Ogr_Delta	PF04606.7	gi|289596012|ref|YP_003482708.1|	-	1.6	8.4	12.2	0.53	9.9	0.2	4.3	3	2	0	3	3	3	0	Ogr/Delta-like	zinc	finger
zf-TFIIB	PF13453.1	gi|289596012|ref|YP_003482708.1|	-	1.9	7.7	4.8	2.4	7.4	0.1	3.0	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
ADK_lid	PF05191.9	gi|289596012|ref|YP_003482708.1|	-	3	7.5	11.6	2.9	7.6	1.6	3.8	3	1	0	3	3	3	0	Adenylate	kinase,	active	site	lid
Ribosomal_S27	PF01599.14	gi|289596012|ref|YP_003482708.1|	-	4.5	7.1	9.0	1.5	8.6	0.0	3.7	3	1	1	4	4	4	0	Ribosomal	protein	S27a
DUF1272	PF06906.6	gi|289596012|ref|YP_003482708.1|	-	5.2	7.0	9.7	0.52	10.2	0.5	3.4	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1272)
UPF0051	PF01458.12	gi|289596013|ref|YP_003482709.1|	-	3.2e-59	200.1	0.0	4e-59	199.8	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|289596014|ref|YP_003482710.1|	-	2.5e-21	76.4	0.0	3.7e-21	75.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596014|ref|YP_003482710.1|	-	6.1e-11	42.8	2.6	4.7e-09	36.6	1.8	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|289596014|ref|YP_003482710.1|	-	2.6e-06	26.8	0.3	5.1e-05	22.6	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|289596014|ref|YP_003482710.1|	-	0.00055	19.1	0.1	0.00095	18.3	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
MutS_V	PF00488.16	gi|289596014|ref|YP_003482710.1|	-	0.00063	19.2	0.3	0.044	13.1	0.1	2.1	2	0	0	2	2	2	1	MutS	domain	V
AAA_25	PF13481.1	gi|289596014|ref|YP_003482710.1|	-	0.0007	19.0	0.0	0.0012	18.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|289596014|ref|YP_003482710.1|	-	0.00088	19.4	0.3	0.0053	16.9	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|289596014|ref|YP_003482710.1|	-	0.0016	17.9	0.1	0.0029	17.0	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|289596014|ref|YP_003482710.1|	-	0.0031	17.8	0.2	0.0079	16.5	0.2	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|289596014|ref|YP_003482710.1|	-	0.0066	14.9	0.6	0.021	13.2	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|289596014|ref|YP_003482710.1|	-	0.0078	16.1	0.0	0.011	15.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|289596014|ref|YP_003482710.1|	-	0.0086	15.1	0.4	0.0086	15.1	0.3	1.5	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|289596014|ref|YP_003482710.1|	-	0.014	14.8	0.2	0.23	10.8	0.1	2.2	2	0	0	2	2	2	0	AAA-like	domain
AAA_17	PF13207.1	gi|289596014|ref|YP_003482710.1|	-	0.022	15.5	0.1	0.048	14.4	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|289596014|ref|YP_003482710.1|	-	0.038	13.6	0.1	0.75	9.4	0.0	2.1	2	0	0	2	2	2	0	NACHT	domain
AAA_14	PF13173.1	gi|289596014|ref|YP_003482710.1|	-	0.053	13.4	0.1	0.22	11.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|289596014|ref|YP_003482710.1|	-	0.069	12.7	0.1	0.41	10.1	0.0	2.1	3	0	0	3	3	3	0	AAA	domain
Mg_chelatase	PF01078.16	gi|289596014|ref|YP_003482710.1|	-	0.084	12.0	0.0	0.13	11.3	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|289596014|ref|YP_003482710.1|	-	0.088	12.2	0.2	1.8	7.9	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|289596014|ref|YP_003482710.1|	-	0.13	12.0	0.1	18	5.1	0.1	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|289596014|ref|YP_003482710.1|	-	0.16	11.9	0.2	0.3	11.0	0.2	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
ACP_syn_III_C	PF08541.5	gi|289596015|ref|YP_003482711.1|	-	2.3e-10	40.3	0.0	4.7e-10	39.3	0.0	1.5	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_N	PF01154.12	gi|289596015|ref|YP_003482711.1|	-	2e-06	27.4	0.0	2.9e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.5	gi|289596015|ref|YP_003482711.1|	-	0.00016	21.2	3.0	0.00057	19.4	0.5	2.3	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|289596015|ref|YP_003482711.1|	-	0.00025	20.1	0.1	0.00037	19.5	0.1	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_C	PF08540.5	gi|289596015|ref|YP_003482711.1|	-	0.0022	17.5	0.0	0.048	13.1	0.0	2.1	1	1	1	2	2	2	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
Thiolase_N	PF00108.18	gi|289596016|ref|YP_003482712.1|	-	3.2e-15	55.8	0.8	2.2e-11	43.2	0.1	2.7	2	1	1	3	3	3	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|289596016|ref|YP_003482712.1|	-	7.5e-14	51.2	0.1	9e-13	47.7	0.0	2.4	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|289596016|ref|YP_003482712.1|	-	3.9e-08	33.0	4.7	5e-07	29.4	1.1	2.7	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|289596016|ref|YP_003482712.1|	-	3.5e-05	23.6	0.2	0.037	13.8	0.0	3.6	3	0	0	3	3	3	1	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|289596016|ref|YP_003482712.1|	-	7.5e-05	22.3	0.3	0.017	14.7	0.1	2.4	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SpoVAD	PF07451.6	gi|289596016|ref|YP_003482712.1|	-	0.0017	16.8	0.0	0.004	15.6	0.0	1.5	1	0	0	1	1	1	1	Stage	V	sporulation	protein	AD	(SpoVAD)
DUF35	PF01796.12	gi|289596017|ref|YP_003482713.1|	-	1.3e-21	76.5	0.2	1.9e-21	76.0	0.1	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|289596017|ref|YP_003482713.1|	-	1.4e-11	43.8	1.9	2.2e-11	43.3	1.3	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DZR	PF12773.2	gi|289596017|ref|YP_003482713.1|	-	0.0031	17.3	0.7	0.0047	16.7	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|289596017|ref|YP_003482713.1|	-	0.02	14.3	2.5	1.3	8.6	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
FdhE	PF04216.7	gi|289596017|ref|YP_003482713.1|	-	0.058	13.0	0.1	0.076	12.7	0.0	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
zf-ribbon_3	PF13248.1	gi|289596017|ref|YP_003482713.1|	-	0.074	12.2	7.2	0.32	10.2	5.0	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|289596017|ref|YP_003482713.1|	-	0.12	12.2	2.0	0.25	11.1	1.2	1.8	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-FPG_IleRS	PF06827.9	gi|289596017|ref|YP_003482713.1|	-	0.13	11.8	3.2	1.7	8.3	0.1	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
DNA_ligase_ZBD	PF03119.11	gi|289596017|ref|YP_003482713.1|	-	0.15	11.8	5.1	3	7.6	0.6	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ISL3	PF14690.1	gi|289596017|ref|YP_003482713.1|	-	0.18	11.8	5.3	1.1	9.2	0.1	2.8	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Auto_anti-p27	PF06677.7	gi|289596017|ref|YP_003482713.1|	-	0.19	11.5	4.2	0.7	9.7	3.0	1.8	1	1	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Nudix_N_2	PF14803.1	gi|289596017|ref|YP_003482713.1|	-	0.29	10.8	4.9	1.1	9.0	0.5	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.2	gi|289596017|ref|YP_003482713.1|	-	0.32	10.8	5.6	0.35	10.7	0.2	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|289596017|ref|YP_003482713.1|	-	0.43	9.9	6.5	2.1	7.7	4.5	2.1	1	1	0	1	1	1	0	TFIIB	zinc-binding
ADK_lid	PF05191.9	gi|289596017|ref|YP_003482713.1|	-	0.62	9.7	7.2	5.8	6.6	0.8	2.5	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-NADH-PPase	PF09297.6	gi|289596017|ref|YP_003482713.1|	-	0.69	9.4	2.9	13	5.3	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289596017|ref|YP_003482713.1|	-	1.1	9.3	6.8	55	3.8	0.5	2.5	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|289596017|ref|YP_003482713.1|	-	2.1	8.8	4.2	35	5.0	0.2	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF1610	PF07754.6	gi|289596017|ref|YP_003482713.1|	-	5.2	7.2	8.7	6.1	7.0	0.8	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Rubredoxin	PF00301.15	gi|289596017|ref|YP_003482713.1|	-	7.4	6.5	7.2	4e+02	0.9	5.0	2.5	1	1	0	1	1	1	0	Rubredoxin
Mut7-C	PF01927.11	gi|289596018|ref|YP_003482714.1|	-	2.2e-50	170.4	0.1	2.6e-50	170.2	0.0	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
Rpr2	PF04032.11	gi|289596018|ref|YP_003482714.1|	-	0.00064	19.5	1.1	0.017	14.9	1.1	2.1	1	1	1	2	2	2	2	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-IS66	PF13005.2	gi|289596018|ref|YP_003482714.1|	-	0.0027	17.6	2.7	0.01	15.7	1.9	1.9	1	1	0	1	1	1	1	zinc-finger	binding	domain	of	transposase	IS66
E6	PF00518.12	gi|289596018|ref|YP_003482714.1|	-	0.0032	17.7	1.1	0.056	13.7	0.6	2.2	1	1	1	2	2	2	1	Early	Protein	(E6)
DUF3922	PF13059.1	gi|289596018|ref|YP_003482714.1|	-	0.031	14.4	0.1	0.053	13.7	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3992)
zf-TFIIB	PF13453.1	gi|289596018|ref|YP_003482714.1|	-	0.056	12.6	0.6	0.18	11.0	0.4	1.9	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
DUF581	PF04570.9	gi|289596018|ref|YP_003482714.1|	-	0.12	11.7	0.7	0.38	10.0	0.5	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF581)
zf-H2C2_2	PF13465.1	gi|289596018|ref|YP_003482714.1|	-	0.82	10.0	2.9	0.87	9.9	0.3	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
eRF1_1	PF03463.10	gi|289596019|ref|YP_003482715.1|	-	4.2e-24	84.6	0.3	7.5e-24	83.7	0.2	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|289596019|ref|YP_003482715.1|	-	4.4e-21	75.2	1.0	3.3e-20	72.4	0.7	2.3	1	1	0	1	1	1	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|289596019|ref|YP_003482715.1|	-	2.9e-11	43.8	0.2	8.1e-09	35.9	0.0	3.2	2	1	0	2	2	2	1	eRF1	domain	2
SpoU_sub_bind	PF08032.7	gi|289596019|ref|YP_003482715.1|	-	0.025	14.7	3.9	0.045	13.9	0.0	2.9	4	0	0	4	4	4	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
YajC	PF02699.10	gi|289596020|ref|YP_003482716.1|	-	0.13	11.9	0.4	0.13	11.9	0.3	2.7	3	0	0	3	3	3	0	Preprotein	translocase	subunit
FUSC	PF04632.7	gi|289596020|ref|YP_003482716.1|	-	8.1	4.7	7.5	12	4.1	5.2	1.2	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
DUF58	PF01882.13	gi|289596021|ref|YP_003482717.1|	-	5e-24	84.2	0.1	8.3e-24	83.5	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
AAA_3	PF07726.6	gi|289596022|ref|YP_003482718.1|	-	2.1e-67	224.6	0.0	3.4e-67	224.0	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|289596022|ref|YP_003482718.1|	-	1.7e-13	50.4	0.0	6.2e-13	48.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.18	gi|289596022|ref|YP_003482718.1|	-	6.1e-09	35.1	0.1	1.1e-07	30.9	0.1	2.5	1	1	0	1	1	1	1	MCM2/3/5	family
Sigma54_activat	PF00158.21	gi|289596022|ref|YP_003482718.1|	-	0.00045	19.7	0.1	0.0011	18.4	0.0	1.7	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA	PF00004.24	gi|289596022|ref|YP_003482718.1|	-	0.0014	18.8	0.0	0.0029	17.7	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|289596022|ref|YP_003482718.1|	-	0.036	13.2	0.0	5.5	6.0	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.7	gi|289596022|ref|YP_003482718.1|	-	0.038	13.0	0.0	0.2	10.6	0.0	2.1	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF4131	PF13567.1	gi|289596023|ref|YP_003482719.1|	-	0.078	12.3	0.0	0.098	12.0	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF4129	PF13559.1	gi|289596024|ref|YP_003482720.1|	-	1.3e-14	53.9	0.0	2.1e-14	53.2	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4129)
DUF1129	PF06570.6	gi|289596024|ref|YP_003482720.1|	-	0.011	15.0	3.8	0.56	9.4	0.1	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
RseC_MucC	PF04246.7	gi|289596024|ref|YP_003482720.1|	-	0.032	13.7	6.6	3.3	7.2	3.0	2.2	2	0	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF4064	PF13273.1	gi|289596024|ref|YP_003482720.1|	-	0.044	13.8	5.6	4.2	7.5	1.3	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Pox_P21	PF05313.7	gi|289596024|ref|YP_003482720.1|	-	0.082	12.1	0.3	0.082	12.1	0.2	2.8	3	1	0	3	3	3	0	Poxvirus	P21	membrane	protein
NKAIN	PF05640.9	gi|289596024|ref|YP_003482720.1|	-	0.082	11.8	0.1	0.16	10.8	0.1	1.4	1	0	0	1	1	1	0	Na,K-Atpase	Interacting	protein
PMP1_2	PF08114.6	gi|289596024|ref|YP_003482720.1|	-	0.085	12.3	1.0	0.23	10.9	0.0	2.2	2	0	0	2	2	2	0	ATPase	proteolipid	family
Oxidored_q4	PF00507.14	gi|289596024|ref|YP_003482720.1|	-	0.19	11.5	2.3	0.23	11.2	0.3	2.0	2	0	0	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
7tm_3	PF00003.17	gi|289596024|ref|YP_003482720.1|	-	0.22	10.8	5.1	0.32	10.2	3.5	1.2	1	0	0	1	1	1	0	7	transmembrane	sweet-taste	receptor	of	3	GCPR
DUF2969	PF11184.3	gi|289596024|ref|YP_003482720.1|	-	0.3	11.1	3.1	0.66	10.1	2.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2969)
Wzy_C	PF04932.10	gi|289596024|ref|YP_003482720.1|	-	1.5	8.6	8.9	0.31	10.8	0.8	2.3	1	1	1	2	2	2	0	O-Antigen	ligase
NfeD	PF01957.13	gi|289596024|ref|YP_003482720.1|	-	2.5	8.2	10.4	0.39	10.8	0.2	2.3	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
DUF2275	PF10039.4	gi|289596024|ref|YP_003482720.1|	-	2.7	7.8	7.5	0.37	10.6	1.6	2.0	2	0	0	2	2	2	0	Predicted	integral	membrane	protein	(DUF2275)
Syndecan	PF01034.15	gi|289596024|ref|YP_003482720.1|	-	3.8	7.2	7.3	1.5	8.5	0.1	2.9	2	1	1	3	3	3	0	Syndecan	domain
dCMP_cyt_deam_1	PF00383.17	gi|289596025|ref|YP_003482721.1|	-	8e-31	105.7	0.8	1e-30	105.4	0.6	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.1	gi|289596025|ref|YP_003482721.1|	-	0.0001	21.9	0.3	0.00012	21.7	0.2	1.2	1	0	0	1	1	1	1	MafB19-like	deaminase
APOBEC_N	PF08210.6	gi|289596025|ref|YP_003482721.1|	-	0.00077	19.1	0.2	0.0011	18.6	0.1	1.2	1	0	0	1	1	1	1	APOBEC-like	N-terminal	domain
XOO_2897-deam	PF14440.1	gi|289596025|ref|YP_003482721.1|	-	0.0016	18.1	0.0	0.0018	17.9	0.0	1.2	1	0	0	1	1	1	1	Xanthomonas	XOO_2897-like	deaminase
Bd3614-deam	PF14439.1	gi|289596025|ref|YP_003482721.1|	-	0.017	14.9	0.2	0.053	13.3	0.1	1.8	1	1	1	2	2	2	0	Bd3614-like	deaminase
tRNA-synt_2b	PF00587.20	gi|289596026|ref|YP_003482722.1|	-	8.2e-37	126.4	0.0	1.8e-36	125.2	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|289596026|ref|YP_003482722.1|	-	8.8e-29	99.6	13.2	8.8e-29	99.6	9.2	1.9	2	0	0	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF4200	PF13863.1	gi|289596026|ref|YP_003482722.1|	-	0.00058	19.8	9.1	0.00058	19.8	6.3	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4200)
TMF_TATA_bd	PF12325.3	gi|289596026|ref|YP_003482722.1|	-	0.0073	16.0	7.0	0.015	14.9	4.8	1.5	1	0	0	1	1	1	1	TATA	element	modulatory	factor	1	TATA	binding
CENP-H	PF05837.7	gi|289596026|ref|YP_003482722.1|	-	0.042	14.0	5.3	0.094	12.8	3.7	1.6	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
AAA_13	PF13166.1	gi|289596026|ref|YP_003482722.1|	-	0.052	12.0	5.9	0.076	11.4	4.1	1.2	1	0	0	1	1	1	0	AAA	domain
GAS	PF13851.1	gi|289596026|ref|YP_003482722.1|	-	0.097	11.8	11.6	0.26	10.4	8.0	1.7	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
TMF_DNA_bd	PF12329.3	gi|289596026|ref|YP_003482722.1|	-	0.2	11.5	12.6	0.56	10.0	8.7	1.7	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
Sipho_Gp157	PF05565.6	gi|289596026|ref|YP_003482722.1|	-	0.31	10.6	8.5	0.94	9.0	5.9	1.8	1	0	0	1	1	1	0	Siphovirus	Gp157
Phage_GP20	PF06810.6	gi|289596026|ref|YP_003482722.1|	-	0.45	9.9	8.8	0.76	9.2	5.7	1.6	1	1	0	1	1	1	0	Phage	minor	structural	protein	GP20
DivIVA	PF05103.8	gi|289596026|ref|YP_003482722.1|	-	0.97	9.4	7.7	0.33	10.9	2.8	2.1	2	1	0	2	2	2	0	DivIVA	protein
DivIC	PF04977.10	gi|289596026|ref|YP_003482722.1|	-	1.1	8.7	14.2	0.024	14.1	3.3	3.1	3	1	0	3	3	3	0	Septum	formation	initiator
DUF16	PF01519.11	gi|289596026|ref|YP_003482722.1|	-	2.2	8.5	8.3	0.82	9.9	3.9	1.7	2	0	0	2	2	1	0	Protein	of	unknown	function	DUF16
IncA	PF04156.9	gi|289596026|ref|YP_003482722.1|	-	7.4	6.1	9.3	1.5	8.4	4.1	1.4	2	0	0	2	2	2	0	IncA	protein
Carb_kinase	PF01256.12	gi|289596027|ref|YP_003482723.1|	-	2.2e-51	174.4	0.0	3.5e-51	173.8	0.0	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|289596027|ref|YP_003482723.1|	-	1e-47	161.8	0.1	2e-47	160.9	0.1	1.5	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|289596027|ref|YP_003482723.1|	-	1.4e-06	27.6	0.0	2.9e-06	26.6	0.0	1.4	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|289596027|ref|YP_003482723.1|	-	0.00083	18.6	0.0	0.0014	17.9	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
DUF498	PF04430.9	gi|289596027|ref|YP_003482723.1|	-	0.068	12.7	0.0	0.24	10.9	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF498/DUF598)
Acetyltransf_1	PF00583.19	gi|289596028|ref|YP_003482724.1|	-	7.4e-20	70.7	0.0	9.7e-20	70.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|289596028|ref|YP_003482724.1|	-	1e-11	44.9	0.0	1.2e-11	44.7	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|289596028|ref|YP_003482724.1|	-	3.5e-10	39.8	0.1	5.1e-10	39.3	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|289596028|ref|YP_003482724.1|	-	6e-08	32.3	0.0	1.2e-07	31.3	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|289596028|ref|YP_003482724.1|	-	6.5e-08	32.4	0.0	1e-07	31.8	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|289596028|ref|YP_003482724.1|	-	2.1e-07	30.9	0.0	2.8e-07	30.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|289596028|ref|YP_003482724.1|	-	4.9e-06	26.3	0.0	7.7e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_4	PF13420.1	gi|289596028|ref|YP_003482724.1|	-	7.1e-06	26.0	0.1	7.8e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|289596028|ref|YP_003482724.1|	-	2.2e-05	24.6	0.0	2.5e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF3749	PF12568.3	gi|289596028|ref|YP_003482724.1|	-	0.00049	19.7	0.0	0.0017	17.9	0.0	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.1	gi|289596028|ref|YP_003482724.1|	-	0.072	13.0	0.0	0.17	11.8	0.0	1.7	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
ADH_N	PF08240.7	gi|289596029|ref|YP_003482725.1|	-	3.8e-36	123.1	0.3	7.1e-36	122.2	0.2	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|289596029|ref|YP_003482725.1|	-	2.9e-07	30.1	0.0	5.7e-07	29.1	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|289596029|ref|YP_003482725.1|	-	0.035	13.2	0.0	0.057	12.5	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
HhH-GPD	PF00730.20	gi|289596030|ref|YP_003482726.1|	-	8.8e-11	42.0	0.0	1.3e-10	41.4	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
Tic20	PF09685.5	gi|289596031|ref|YP_003482727.1|	-	0.028	14.3	3.5	0.27	11.2	0.1	2.0	2	0	0	2	2	2	0	Tic20-like	protein
RDD	PF06271.7	gi|289596031|ref|YP_003482727.1|	-	0.031	14.1	1.6	0.045	13.6	1.1	1.2	1	0	0	1	1	1	0	RDD	family
Tetraspannin	PF00335.15	gi|289596031|ref|YP_003482727.1|	-	0.055	12.7	4.4	0.066	12.4	3.1	1.1	1	0	0	1	1	1	0	Tetraspanin	family
DUF4179	PF13786.1	gi|289596031|ref|YP_003482727.1|	-	0.098	12.8	0.0	0.2	11.8	0.0	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4179)
AgrB	PF04647.10	gi|289596031|ref|YP_003482727.1|	-	0.14	11.1	4.4	0.33	10.0	0.2	2.0	2	0	0	2	2	2	0	Accessory	gene	regulator	B
DUF4013	PF13197.1	gi|289596031|ref|YP_003482727.1|	-	0.16	11.2	8.0	0.3	10.3	5.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4013)
DUF367	PF04034.8	gi|289596032|ref|YP_003482728.1|	-	2.3e-44	150.0	0.0	2.9e-44	149.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|289596032|ref|YP_003482728.1|	-	1.9e-10	40.1	0.0	2.8e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
PEP-utilizers_C	PF02896.13	gi|289596033|ref|YP_003482729.1|	-	1.1e-101	339.6	1.1	2.5e-101	338.4	0.8	1.6	1	1	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PPDK_N	PF01326.14	gi|289596033|ref|YP_003482729.1|	-	2.9e-67	227.0	0.0	4.8e-67	226.3	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers	PF00391.18	gi|289596033|ref|YP_003482729.1|	-	2.8e-25	87.6	0.6	5.8e-25	86.6	0.4	1.5	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Flagellin_C	PF00700.16	gi|289596033|ref|YP_003482729.1|	-	0.11	12.7	0.0	0.3	11.2	0.0	1.8	1	0	0	1	1	1	0	Bacterial	flagellin	C-terminal	helical	region
ATP-synt_F6	PF05511.6	gi|289596033|ref|YP_003482729.1|	-	0.12	12.2	2.0	0.96	9.3	0.1	2.7	2	0	0	2	2	2	0	Mitochondrial	ATP	synthase	coupling	factor	6
Laminin_II	PF06009.7	gi|289596033|ref|YP_003482729.1|	-	1.4	8.6	10.6	1.1	9.0	0.0	3.6	4	0	0	4	4	4	0	Laminin	Domain	II
DUF3816	PF12822.2	gi|289596036|ref|YP_003482732.1|	-	0.0096	15.8	0.3	0.0096	15.8	0.2	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3816)
DUF2142	PF09913.4	gi|289596036|ref|YP_003482732.1|	-	0.061	11.9	2.9	0.088	11.4	0.6	1.9	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2142)
Glucos_trans_II	PF14264.1	gi|289596036|ref|YP_003482732.1|	-	0.067	12.1	1.8	0.09	11.7	0.1	1.8	2	0	0	2	2	2	0	Glucosyl	transferase	GtrII
Cu_amine_oxidN1	PF07833.6	gi|289596036|ref|YP_003482732.1|	-	0.078	13.3	0.5	0.17	12.2	0.3	1.6	1	0	0	1	1	1	0	Copper	amine	oxidase	N-terminal	domain
Chs3p	PF12271.3	gi|289596036|ref|YP_003482732.1|	-	0.12	11.3	5.2	0.031	13.2	1.3	1.7	2	0	0	2	2	2	0	Chitin	synthase	III	catalytic	subunit
DUF4184	PF13803.1	gi|289596036|ref|YP_003482732.1|	-	0.2	10.9	1.5	0.18	11.1	0.2	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4184)
DUF4234	PF14018.1	gi|289596036|ref|YP_003482732.1|	-	0.32	10.7	3.3	0.91	9.3	2.3	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4234)
PLDc_N	PF13396.1	gi|289596036|ref|YP_003482732.1|	-	0.42	10.3	14.4	1.6	8.4	10.0	2.0	1	1	0	1	1	1	0	Phospholipase_D-nuclease	N-terminal
zf-LITAF-like	PF10601.4	gi|289596036|ref|YP_003482732.1|	-	0.55	10.1	0.0	0.55	10.1	0.0	2.4	2	1	1	3	3	3	0	LITAF-like	zinc	ribbon	domain
AA_permease_2	PF13520.1	gi|289596036|ref|YP_003482732.1|	-	0.73	8.3	9.1	0.099	11.1	2.1	2.0	2	0	0	2	2	2	0	Amino	acid	permease
QRPTase_C	PF01729.14	gi|289596037|ref|YP_003482733.1|	-	1.4e-53	180.8	0.8	1.9e-53	180.4	0.5	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|289596037|ref|YP_003482733.1|	-	1.3e-22	79.4	0.0	2.4e-22	78.5	0.0	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribul_P_3_epim	PF00834.14	gi|289596037|ref|YP_003482733.1|	-	0.026	13.6	0.0	0.053	12.6	0.0	1.7	1	1	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
Mesd	PF10185.4	gi|289596037|ref|YP_003482733.1|	-	0.038	13.6	0.1	0.066	12.8	0.0	1.3	1	0	0	1	1	1	0	Chaperone	for	wingless	signalling	and	trafficking	of	LDL	receptor
NadA	PF02445.11	gi|289596038|ref|YP_003482734.1|	-	5e-110	366.9	2.2	5.8e-110	366.7	1.5	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
LysR_substrate	PF03466.15	gi|289596038|ref|YP_003482734.1|	-	0.11	11.6	0.0	0.18	10.9	0.0	1.3	1	0	0	1	1	1	0	LysR	substrate	binding	domain
DinI	PF06183.8	gi|289596038|ref|YP_003482734.1|	-	0.15	12.0	0.3	3.1	7.8	0.0	3.1	4	0	0	4	4	4	0	DinI-like	family
DUF108	PF01958.13	gi|289596039|ref|YP_003482735.1|	-	1.9e-30	104.9	0.0	2.9e-30	104.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.11	gi|289596039|ref|YP_003482735.1|	-	7e-18	65.1	0.1	4.8e-17	62.4	0.0	2.3	2	1	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|289596039|ref|YP_003482735.1|	-	2.9e-05	23.9	0.6	0.00015	21.6	0.4	2.1	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.14	gi|289596039|ref|YP_003482735.1|	-	0.00012	21.3	0.0	0.00023	20.3	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|289596039|ref|YP_003482735.1|	-	0.00016	22.0	1.9	0.0016	18.8	1.3	2.3	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|289596039|ref|YP_003482735.1|	-	0.012	16.1	0.5	0.026	15.0	0.4	1.7	1	1	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_Gly3P_dh_N	PF01210.18	gi|289596039|ref|YP_003482735.1|	-	0.019	14.6	0.1	0.036	13.8	0.1	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|289596039|ref|YP_003482735.1|	-	0.1	12.4	0.1	0.19	11.5	0.1	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NMT1_2	PF13379.1	gi|289596040|ref|YP_003482736.1|	-	5.4e-10	39.0	0.0	2.1e-08	33.8	0.0	2.1	1	1	1	2	2	2	1	NMT1-like	family
HTH_24	PF13412.1	gi|289596040|ref|YP_003482736.1|	-	0.00011	21.4	0.1	0.00023	20.4	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF3834	PF12916.2	gi|289596040|ref|YP_003482736.1|	-	0.00021	20.3	0.0	0.00029	19.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
Sulfolobus_pRN	PF05584.6	gi|289596040|ref|YP_003482736.1|	-	0.00029	20.7	0.1	0.00088	19.1	0.1	1.8	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
SBP_bac_3	PF00497.15	gi|289596040|ref|YP_003482736.1|	-	0.00048	19.4	0.0	0.0053	16.0	0.0	2.1	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	3
MarR_2	PF12802.2	gi|289596040|ref|YP_003482736.1|	-	0.00052	19.6	0.0	0.0016	18.0	0.0	1.8	2	0	0	2	2	2	1	MarR	family
NMT1	PF09084.6	gi|289596040|ref|YP_003482736.1|	-	0.0011	18.6	0.0	0.0056	16.2	0.0	2.0	2	0	0	2	2	2	1	NMT1/THI5	like
MarR	PF01047.17	gi|289596040|ref|YP_003482736.1|	-	0.0011	18.6	0.1	0.0023	17.6	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|289596040|ref|YP_003482736.1|	-	0.0073	15.9	0.2	0.017	14.7	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_23	PF13384.1	gi|289596040|ref|YP_003482736.1|	-	0.0089	15.6	0.0	0.026	14.1	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
OpuAC	PF04069.7	gi|289596040|ref|YP_003482736.1|	-	0.029	13.7	0.0	0.079	12.2	0.0	1.8	1	1	0	1	1	1	0	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
B-block_TFIIIC	PF04182.7	gi|289596040|ref|YP_003482736.1|	-	0.033	14.0	0.0	0.06	13.2	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Penicillinase_R	PF03965.11	gi|289596040|ref|YP_003482736.1|	-	0.037	14.1	0.1	0.069	13.2	0.1	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
Mga	PF05043.8	gi|289596040|ref|YP_003482736.1|	-	0.038	14.2	0.4	2.4	8.4	0.0	3.2	3	0	0	3	3	3	0	Mga	helix-turn-helix	domain
HTH_3	PF01381.17	gi|289596040|ref|YP_003482736.1|	-	0.043	13.6	0.0	0.13	12.1	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix
HTH_28	PF13518.1	gi|289596040|ref|YP_003482736.1|	-	0.061	13.3	0.0	0.19	11.7	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
Phosphonate-bd	PF12974.2	gi|289596040|ref|YP_003482736.1|	-	0.083	12.2	0.0	0.18	11.1	0.0	1.7	1	1	0	1	1	1	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
PuR_N	PF09182.5	gi|289596040|ref|YP_003482736.1|	-	0.085	12.4	0.0	0.23	11.1	0.0	1.7	1	0	0	1	1	1	0	Bacterial	purine	repressor,	N-terminal
HTH_AsnC-type	PF13404.1	gi|289596041|ref|YP_003482737.1|	-	1.2e-26	91.9	0.0	1.2e-12	47.1	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596041|ref|YP_003482737.1|	-	4.7e-22	77.1	0.0	4.6e-10	38.7	0.0	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|289596041|ref|YP_003482737.1|	-	1.2e-08	34.7	0.4	0.0038	17.1	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|289596041|ref|YP_003482737.1|	-	7.3e-08	31.9	0.3	0.00013	21.5	0.0	2.9	3	0	0	3	3	2	2	HTH	domain
HTH_23	PF13384.1	gi|289596041|ref|YP_003482737.1|	-	8.3e-08	31.6	0.8	0.00058	19.4	0.0	2.5	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_20	PF12840.2	gi|289596041|ref|YP_003482737.1|	-	1.6e-07	31.0	0.0	0.0071	16.1	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289596041|ref|YP_003482737.1|	-	2.9e-07	30.0	0.0	0.0022	17.6	0.0	2.6	2	1	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|289596041|ref|YP_003482737.1|	-	2.6e-06	27.0	0.0	3.5e-05	23.4	0.0	2.2	2	0	0	2	2	2	1	MarR	family
HTH_38	PF13936.1	gi|289596041|ref|YP_003482737.1|	-	4.2e-06	26.2	0.0	0.092	12.3	0.0	3.3	2	1	0	2	2	2	2	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289596041|ref|YP_003482737.1|	-	6.5e-06	25.7	0.0	0.11	12.1	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|289596041|ref|YP_003482737.1|	-	1.7e-05	24.4	0.0	0.1	12.2	0.0	2.3	2	0	0	2	2	2	2	MarR	family
Mga	PF05043.8	gi|289596041|ref|YP_003482737.1|	-	0.00046	20.4	0.0	0.022	15.0	0.0	2.9	2	1	1	3	3	3	1	Mga	helix-turn-helix	domain
HTH_7	PF02796.10	gi|289596041|ref|YP_003482737.1|	-	0.00067	19.4	0.0	0.24	11.2	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_1	PF00126.22	gi|289596041|ref|YP_003482737.1|	-	0.0038	16.9	0.0	2.5	7.8	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Tnp_ISL3	PF13542.1	gi|289596041|ref|YP_003482737.1|	-	0.0051	15.9	0.0	0.016	14.3	0.0	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
RepL	PF05732.6	gi|289596041|ref|YP_003482737.1|	-	0.0066	15.6	0.0	0.66	9.1	0.0	2.4	2	0	0	2	2	2	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_10	PF04967.7	gi|289596041|ref|YP_003482737.1|	-	0.0068	15.9	0.0	2.8	7.5	0.0	2.4	2	0	0	2	2	2	1	HTH	DNA	binding	domain
LacI	PF00356.16	gi|289596041|ref|YP_003482737.1|	-	0.0079	15.7	2.8	0.038	13.5	0.1	2.8	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	lacI	family
Sigma70_r4_2	PF08281.7	gi|289596041|ref|YP_003482737.1|	-	0.0094	15.3	0.0	1.8	8.0	0.0	2.8	3	0	0	3	3	2	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|289596041|ref|YP_003482737.1|	-	0.014	15.5	0.1	1.3	9.1	0.0	2.3	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_IclR	PF09339.5	gi|289596041|ref|YP_003482737.1|	-	0.027	14.0	0.0	0.25	10.9	0.0	2.1	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_17	PF12728.2	gi|289596041|ref|YP_003482737.1|	-	0.028	14.6	0.1	2.2	8.6	0.0	2.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|289596041|ref|YP_003482737.1|	-	0.029	13.6	0.0	0.23	10.7	0.0	2.3	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_36	PF13730.1	gi|289596041|ref|YP_003482737.1|	-	0.034	14.2	0.2	16	5.6	0.0	3.0	3	0	0	3	3	2	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|289596041|ref|YP_003482737.1|	-	0.035	14.4	0.1	2.6	8.4	0.0	2.5	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
TetR_N	PF00440.18	gi|289596041|ref|YP_003482737.1|	-	0.037	13.6	0.0	4	7.1	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_DeoR	PF08220.7	gi|289596041|ref|YP_003482737.1|	-	0.05	13.1	0.0	5	6.7	0.0	2.4	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Sigma70_ECF	PF07638.6	gi|289596041|ref|YP_003482737.1|	-	0.076	12.6	0.2	0.56	9.8	0.1	2.1	2	0	0	2	2	2	0	ECF	sigma	factor
HTH_Mga	PF08280.6	gi|289596041|ref|YP_003482737.1|	-	0.078	12.7	0.0	2.5	7.9	0.0	2.6	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
LexA_DNA_bind	PF01726.11	gi|289596041|ref|YP_003482737.1|	-	0.091	12.3	0.0	1.7	8.2	0.0	2.4	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|289596041|ref|YP_003482737.1|	-	0.1	12.3	0.0	20	5.0	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|289596041|ref|YP_003482737.1|	-	0.12	12.4	0.0	8	6.5	0.0	2.5	3	0	0	3	3	2	0	Winged	helix	DNA-binding	domain
LZ_Tnp_IS481	PF13011.1	gi|289596041|ref|YP_003482737.1|	-	0.13	12.5	0.1	2.2	8.6	0.0	2.2	2	0	0	2	2	2	0	leucine-zipper	of	insertion	element	IS481
HhH-GPD	PF00730.20	gi|289596043|ref|YP_003482739.1|	-	1.8e-25	89.2	0.0	2.6e-25	88.7	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|289596043|ref|YP_003482739.1|	-	5.3e-10	38.4	0.7	1.5e-09	37.0	0.0	2.2	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|289596043|ref|YP_003482739.1|	-	0.00065	19.8	0.1	0.018	15.1	0.0	2.3	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
DUF3798	PF12683.2	gi|289596043|ref|YP_003482739.1|	-	0.0055	15.8	0.0	0.0099	14.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3798)
EndIII_4Fe-2S	PF10576.4	gi|289596043|ref|YP_003482739.1|	-	0.02	15.0	7.0	0.034	14.3	4.8	1.4	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
CH	PF00307.26	gi|289596045|ref|YP_003482741.1|	-	0.054	13.5	0.4	0.49	10.4	0.1	2.1	1	1	1	2	2	2	0	Calponin	homology	(CH)	domain
BID	PF06393.6	gi|289596045|ref|YP_003482741.1|	-	0.08	12.2	0.1	0.13	11.5	0.1	1.3	1	1	0	1	1	1	0	BH3	interacting	domain	(BID)
ATP-synt_E	PF05680.7	gi|289596045|ref|YP_003482741.1|	-	0.098	12.6	0.4	0.13	12.2	0.3	1.2	1	0	0	1	1	1	0	ATP	synthase	E	chain
HD_3	PF13023.1	gi|289596046|ref|YP_003482742.1|	-	3.1e-30	105.1	0.0	3.7e-30	104.8	0.0	1.1	1	0	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|289596046|ref|YP_003482742.1|	-	4.9e-05	23.3	0.3	7.5e-05	22.7	0.2	1.4	1	1	0	1	1	1	1	HD	domain
ACDC	PF14733.1	gi|289596046|ref|YP_003482742.1|	-	0.11	12.6	0.0	0.18	11.9	0.0	1.3	1	0	0	1	1	1	0	AP2-coincident	C-terminal
TatD_DNase	PF01026.16	gi|289596047|ref|YP_003482743.1|	-	2.6e-24	85.8	0.0	3.3e-24	85.4	0.0	1.1	1	0	0	1	1	1	1	TatD	related	DNase
DUF4443	PF14544.1	gi|289596048|ref|YP_003482744.1|	-	0.081	12.8	0.2	0.087	12.7	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4443)
adh_short	PF00106.20	gi|289596049|ref|YP_003482745.1|	-	6e-21	75.0	0.0	9.8e-21	74.3	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|289596049|ref|YP_003482745.1|	-	2.2e-10	40.7	0.0	2.6e-10	40.4	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.16	gi|289596049|ref|YP_003482745.1|	-	2.1e-07	30.6	0.4	8.9e-07	28.5	0.3	2.1	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.5	gi|289596049|ref|YP_003482745.1|	-	1.7e-05	24.5	0.0	4.7e-05	23.1	0.0	1.6	1	1	0	1	1	1	1	KR	domain
RmlD_sub_bind	PF04321.12	gi|289596049|ref|YP_003482745.1|	-	0.00037	19.4	0.0	0.017	14.0	0.0	2.0	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|289596049|ref|YP_003482745.1|	-	0.00046	20.2	0.0	0.001	19.0	0.0	1.6	2	0	0	2	2	2	1	NADH(P)-binding
TrkA_N	PF02254.13	gi|289596049|ref|YP_003482745.1|	-	0.0018	18.2	0.0	0.0037	17.2	0.0	1.5	1	0	0	1	1	1	1	TrkA-N	domain
DUF2591	PF10765.4	gi|289596049|ref|YP_003482745.1|	-	0.011	15.8	0.0	0.022	14.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2591)
Glyco_tran_WecB	PF03808.8	gi|289596049|ref|YP_003482745.1|	-	0.019	14.3	0.1	4.3	6.7	0.0	2.2	1	1	1	2	2	2	0	Glycosyl	transferase	WecB/TagA/CpsF	family
F420_oxidored	PF03807.12	gi|289596049|ref|YP_003482745.1|	-	0.12	12.7	0.2	0.3	11.5	0.1	1.7	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Fer4	PF00037.22	gi|289596051|ref|YP_003482747.1|	-	1.4e-10	40.2	18.1	2.1e-05	23.9	2.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596051|ref|YP_003482747.1|	-	4.9e-10	39.0	6.3	4.4e-05	23.2	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289596051|ref|YP_003482747.1|	-	4e-09	36.7	11.0	1e-08	35.4	7.7	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596051|ref|YP_003482747.1|	-	8.4e-09	35.1	24.2	2e-05	24.3	9.5	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596051|ref|YP_003482747.1|	-	2.4e-08	33.4	16.0	8.6e-05	22.2	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596051|ref|YP_003482747.1|	-	2.4e-08	34.1	3.8	0.00084	19.6	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596051|ref|YP_003482747.1|	-	3.7e-08	33.5	22.3	1.1e-05	25.5	9.2	2.1	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289596051|ref|YP_003482747.1|	-	2.3e-07	31.1	5.8	0.0015	18.9	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596051|ref|YP_003482747.1|	-	4.8e-07	29.7	9.7	4.6e-05	23.3	9.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596051|ref|YP_003482747.1|	-	9.7e-07	28.4	15.7	0.0022	17.8	1.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|289596051|ref|YP_003482747.1|	-	1.9e-06	28.5	10.5	0.00057	20.5	9.1	2.4	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|289596051|ref|YP_003482747.1|	-	0.001	19.1	17.0	0.013	15.7	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289596051|ref|YP_003482747.1|	-	0.0072	16.8	7.7	0.13	12.8	0.5	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|289596051|ref|YP_003482747.1|	-	0.061	13.9	5.7	0.061	13.9	3.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|289596051|ref|YP_003482747.1|	-	0.091	13.1	3.4	0.091	13.1	2.3	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Complex1_49kDa	PF00346.14	gi|289596052|ref|YP_003482748.1|	-	1e-57	195.2	0.0	2.1e-41	141.7	0.0	2.2	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|289596052|ref|YP_003482748.1|	-	0.00022	20.1	0.0	0.00038	19.3	0.0	1.3	1	0	0	1	1	1	1	Nickel-dependent	hydrogenase
Complex1_30kDa	PF00329.14	gi|289596053|ref|YP_003482749.1|	-	8.4e-29	99.8	0.1	1.1e-28	99.4	0.1	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Imm9	PF15561.1	gi|289596053|ref|YP_003482749.1|	-	0.056	13.0	0.1	0.2	11.2	0.0	1.9	1	1	1	2	2	2	0	Immunity	protein	9
Oxidored_q6	PF01058.17	gi|289596054|ref|YP_003482750.1|	-	7.8e-24	83.7	0.0	9.6e-24	83.4	0.0	1.1	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
RE_NgoFVII	PF09565.5	gi|289596054|ref|YP_003482750.1|	-	0.0071	15.3	0.0	0.0099	14.8	0.0	1.2	1	0	0	1	1	1	1	NgoFVII	restriction	endonuclease
Recombinase	PF07508.8	gi|289596054|ref|YP_003482750.1|	-	0.12	12.6	0.2	1.4	9.1	0.0	2.2	2	1	0	2	2	2	0	Recombinase
NADHdh	PF00146.16	gi|289596055|ref|YP_003482751.1|	-	8.3e-32	110.4	19.7	1.1e-31	110.1	13.6	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Oxidored_q1	PF00361.15	gi|289596056|ref|YP_003482752.1|	-	1.7e-50	171.7	29.6	1.7e-50	171.7	20.5	3.4	3	1	0	3	3	3	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1	PF00361.15	gi|289596057|ref|YP_003482753.1|	-	1.5e-57	194.9	22.8	1.5e-57	194.9	15.8	2.8	3	1	1	4	4	4	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
NADHdeh_related	PF10125.4	gi|289596057|ref|YP_003482753.1|	-	3.8e-06	26.2	9.2	3.8e-06	26.2	6.4	3.4	2	2	1	4	4	4	2	NADH	dehydrogenase	I,	subunit	N	related	protein
Oxidored_q2	PF00420.19	gi|289596058|ref|YP_003482754.1|	-	1.8e-25	88.3	1.9	2.2e-25	88.0	1.3	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.4	gi|289596058|ref|YP_003482754.1|	-	0.004	16.9	4.8	0.004	16.9	3.4	1.8	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2108)
SPW	PF03779.9	gi|289596058|ref|YP_003482754.1|	-	0.28	10.5	7.4	0.4	10.0	1.4	2.5	2	0	0	2	2	2	0	SPW	repeat
MnhB	PF04039.8	gi|289596059|ref|YP_003482755.1|	-	4.3e-27	94.6	14.6	4.3e-27	94.6	10.2	2.6	3	0	0	3	3	3	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2105	PF09878.4	gi|289596059|ref|YP_003482755.1|	-	0.0064	16.0	4.8	0.012	15.2	3.3	1.4	1	1	0	1	1	1	1	Predicted	membrane	protein	(DUF2105)
DUF2416	PF10315.4	gi|289596059|ref|YP_003482755.1|	-	0.028	14.6	0.1	0.054	13.7	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2416)
UbiA	PF01040.13	gi|289596059|ref|YP_003482755.1|	-	1.8	7.7	18.1	0.58	9.3	9.2	2.3	2	1	1	3	3	3	0	UbiA	prenyltransferase	family
Sigma_reg_N	PF13800.1	gi|289596059|ref|YP_003482755.1|	-	2	8.5	6.5	5.5	7.0	0.2	2.7	3	0	0	3	3	3	0	Sigma	factor	regulator	N-terminal
DUF4040	PF13244.1	gi|289596060|ref|YP_003482756.1|	-	7e-21	73.9	9.2	7e-21	73.9	6.4	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
DUF4199	PF13858.1	gi|289596060|ref|YP_003482756.1|	-	0.01	15.7	1.4	0.01	15.7	1.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
HlyIII	PF03006.15	gi|289596060|ref|YP_003482756.1|	-	0.067	12.5	3.6	0.074	12.4	2.5	1.1	1	0	0	1	1	1	0	Haemolysin-III	related
YibE_F	PF07907.6	gi|289596060|ref|YP_003482756.1|	-	0.097	11.8	10.8	0.11	11.6	7.5	1.0	1	0	0	1	1	1	0	YibE/F-like	protein
Bax1-I	PF01027.15	gi|289596060|ref|YP_003482756.1|	-	0.21	11.1	9.5	0.25	10.9	6.6	1.1	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
CreD	PF06123.7	gi|289596060|ref|YP_003482756.1|	-	0.23	9.9	5.1	0.24	9.9	3.5	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
Virul_fac_BrkB	PF03631.10	gi|289596060|ref|YP_003482756.1|	-	0.23	10.7	9.6	0.44	9.8	6.6	1.4	1	1	0	1	1	1	0	Virulence	factor	BrkB
TspO_MBR	PF03073.10	gi|289596060|ref|YP_003482756.1|	-	0.54	9.7	6.6	0.77	9.2	4.6	1.2	1	0	0	1	1	1	0	TspO/MBR	family
DUF3522	PF12036.3	gi|289596060|ref|YP_003482756.1|	-	0.7	9.6	5.9	0.82	9.4	4.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3522)
Polysacc_synt_C	PF14667.1	gi|289596060|ref|YP_003482756.1|	-	0.91	9.3	11.8	1.4	8.7	8.2	1.3	1	1	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
CorA	PF01544.13	gi|289596060|ref|YP_003482756.1|	-	0.94	8.4	7.5	1.3	8.0	5.2	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
B12D	PF06522.6	gi|289596060|ref|YP_003482756.1|	-	1.5	8.5	4.8	1.5	8.5	0.1	2.2	1	1	1	2	2	2	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
DUF2207	PF09972.4	gi|289596060|ref|YP_003482756.1|	-	1.6	7.2	7.6	1.8	7.0	5.3	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF4191	PF13829.1	gi|289596060|ref|YP_003482756.1|	-	2.3	7.2	4.6	3.1	6.8	3.0	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4191)
Herpes_LMP1	PF05297.6	gi|289596060|ref|YP_003482756.1|	-	2.6	6.8	7.2	2.6	6.8	5.0	1.1	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
7TMR-DISM_7TM	PF07695.6	gi|289596060|ref|YP_003482756.1|	-	3.8	7.1	11.1	4.6	6.8	7.7	1.2	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
DUF998	PF06197.8	gi|289596060|ref|YP_003482756.1|	-	4.2	6.6	10.4	4.9	6.4	7.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
DUF3487	PF11990.3	gi|289596060|ref|YP_003482756.1|	-	6.4	6.2	10.9	0.19	11.1	1.7	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3487)
DUF1700	PF08006.6	gi|289596060|ref|YP_003482756.1|	-	8.2	5.6	10.5	9.6	5.4	7.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
PhaG_MnhG_YufB	PF03334.9	gi|289596061|ref|YP_003482757.1|	-	1.6e-24	85.7	6.2	2.1e-24	85.3	4.3	1.2	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
DUF1707	PF08044.6	gi|289596061|ref|YP_003482757.1|	-	0.03	14.0	0.0	0.044	13.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1707)
Bax1-I	PF01027.15	gi|289596061|ref|YP_003482757.1|	-	0.05	13.2	7.6	0.055	13.0	5.3	1.1	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
TauE	PF01925.14	gi|289596061|ref|YP_003482757.1|	-	0.1	12.0	9.3	0.11	11.9	6.5	1.1	1	0	0	1	1	1	0	Sulfite	exporter	TauE/SafE
DUF2371	PF10177.4	gi|289596061|ref|YP_003482757.1|	-	0.29	11.0	3.5	0.55	10.0	0.0	2.1	1	1	1	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
DUF4064	PF13273.1	gi|289596061|ref|YP_003482757.1|	-	1.2	9.3	9.0	2.8	8.0	6.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF1625	PF07787.7	gi|289596061|ref|YP_003482757.1|	-	1.5	8.0	3.2	2	7.5	2.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
DUF1469	PF07332.6	gi|289596061|ref|YP_003482757.1|	-	9	6.0	8.6	2.7	7.7	1.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
MrpF_PhaF	PF04066.8	gi|289596062|ref|YP_003482758.1|	-	1.8e-18	66.5	6.7	1.8e-18	66.5	4.6	2.0	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF3278	PF11683.3	gi|289596062|ref|YP_003482758.1|	-	2.3	8.2	5.1	0.74	9.8	1.5	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3278)
Cation_efflux	PF01545.16	gi|289596062|ref|YP_003482758.1|	-	3.2	6.7	10.6	7.1	5.6	7.3	1.6	1	1	0	1	1	1	0	Cation	efflux	family
VIT1	PF01988.14	gi|289596062|ref|YP_003482758.1|	-	4.7	6.6	7.4	5.2	6.5	5.2	1.1	1	0	0	1	1	1	0	VIT	family
MNHE	PF01899.11	gi|289596063|ref|YP_003482759.1|	-	1.7e-46	157.6	0.0	2.2e-46	157.3	0.0	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
FUSC_2	PF13515.1	gi|289596063|ref|YP_003482759.1|	-	0.075	12.9	0.2	0.13	12.2	0.2	1.3	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein-like
DUF1212	PF06738.7	gi|289596063|ref|YP_003482759.1|	-	0.17	11.3	0.8	0.25	10.7	0.2	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
DNA_pol_B	PF00136.16	gi|289596064|ref|YP_003482760.1|	-	8.7e-06	24.7	0.0	0.063	12.0	0.0	3.0	2	1	0	2	2	2	2	DNA	polymerase	family	B
HNH	PF01844.18	gi|289596065|ref|YP_003482761.1|	-	0.00084	19.1	5.1	0.0019	18.0	3.5	1.6	1	0	0	1	1	1	1	HNH	endonuclease
zf-CCHC_4	PF14392.1	gi|289596065|ref|YP_003482761.1|	-	0.0074	15.9	0.7	0.023	14.3	0.0	2.1	2	0	0	2	2	2	1	Zinc	knuckle
DZR	PF12773.2	gi|289596065|ref|YP_003482761.1|	-	0.031	14.1	0.4	0.057	13.2	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF2296	PF10058.4	gi|289596065|ref|YP_003482761.1|	-	0.059	13.1	0.3	0.059	13.1	0.2	1.7	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DUF968	PF06147.6	gi|289596065|ref|YP_003482761.1|	-	0.098	12.5	2.4	0.17	11.7	1.7	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF968)
FdhE	PF04216.7	gi|289596065|ref|YP_003482761.1|	-	0.098	12.3	1.4	0.17	11.6	1.0	1.3	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
zf-DBF	PF07535.7	gi|289596065|ref|YP_003482761.1|	-	0.14	11.8	0.4	0.14	11.8	0.3	1.8	2	0	0	2	2	2	0	DBF	zinc	finger
HTH_28	PF13518.1	gi|289596066|ref|YP_003482762.1|	-	0.00019	21.3	0.0	0.00052	19.9	0.0	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|289596066|ref|YP_003482762.1|	-	0.0027	17.2	0.0	0.01	15.4	0.0	1.9	1	1	1	2	2	2	1	Homeodomain-like	domain
HTH_7	PF02796.10	gi|289596066|ref|YP_003482762.1|	-	0.017	14.9	0.0	0.074	12.9	0.0	2.1	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_29	PF13551.1	gi|289596066|ref|YP_003482762.1|	-	0.038	14.1	0.0	0.065	13.3	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
GerE	PF00196.14	gi|289596066|ref|YP_003482762.1|	-	0.08	12.2	0.2	0.27	10.5	0.2	1.9	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Lipocalin_3	PF12702.2	gi|289596066|ref|YP_003482762.1|	-	0.11	12.5	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Lipocalin-like
MarR	PF01047.17	gi|289596067|ref|YP_003482763.1|	-	0.01	15.5	0.2	0.033	13.9	0.1	1.9	1	0	0	1	1	1	0	MarR	family
HTH_45	PF14947.1	gi|289596067|ref|YP_003482763.1|	-	0.01	15.6	8.3	0.072	12.9	0.4	4.1	2	2	1	3	3	3	0	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|289596067|ref|YP_003482763.1|	-	0.017	14.4	0.6	0.069	12.5	0.3	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.12	gi|289596067|ref|YP_003482763.1|	-	0.029	13.9	0.1	0.092	12.3	0.1	1.9	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF977	PF06163.6	gi|289596067|ref|YP_003482763.1|	-	0.061	13.0	0.3	0.19	11.5	0.2	1.8	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Rrf2	PF02082.15	gi|289596067|ref|YP_003482763.1|	-	0.14	12.3	0.1	0.37	10.9	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator
Cas_Cas1	PF01867.11	gi|289596068|ref|YP_003482764.1|	-	2.2e-64	217.2	2.9	2.8e-64	216.9	2.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
N6_Mtase	PF02384.11	gi|289596069|ref|YP_003482765.1|	-	7.8e-15	54.7	0.0	4.4e-14	52.2	0.0	2.0	1	1	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_26	PF13659.1	gi|289596069|ref|YP_003482765.1|	-	2.2e-12	47.0	0.0	4.4e-12	46.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|289596069|ref|YP_003482765.1|	-	6.6e-06	25.8	0.3	5.6e-05	22.7	0.0	2.5	2	1	1	3	3	3	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.1	gi|289596069|ref|YP_003482765.1|	-	4.7e-05	23.0	0.5	0.0011	18.5	0.0	3.2	3	1	0	3	3	3	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|289596069|ref|YP_003482765.1|	-	0.0011	18.5	2.1	0.051	13.0	0.0	3.1	3	0	0	3	3	3	1	DNA	methylase
MTS	PF05175.9	gi|289596069|ref|YP_003482765.1|	-	0.0084	15.4	0.0	0.33	10.3	0.0	2.9	2	1	0	2	2	2	1	Methyltransferase	small	domain
MHC_II_beta	PF00969.14	gi|289596069|ref|YP_003482765.1|	-	0.14	12.1	0.0	0.46	10.4	0.0	1.8	1	0	0	1	1	1	0	Class	II	histocompatibility	antigen,	beta	domain
Methyltransf_18	PF12847.2	gi|289596069|ref|YP_003482765.1|	-	0.16	12.5	0.0	0.49	10.9	0.0	1.9	1	0	0	1	1	1	0	Methyltransferase	domain
Peptidase_S9	PF00326.16	gi|289596072|ref|YP_003482768.1|	-	1.6e-54	184.3	0.1	2.4e-54	183.8	0.1	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
AXE1	PF05448.7	gi|289596072|ref|YP_003482768.1|	-	7.9e-10	37.7	0.0	3.1e-07	29.2	0.0	3.1	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_5	PF12695.2	gi|289596072|ref|YP_003482768.1|	-	3.2e-09	36.6	0.0	5.8e-09	35.8	0.0	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|289596072|ref|YP_003482768.1|	-	6.8e-09	35.9	0.0	2e-08	34.4	0.0	1.7	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|289596072|ref|YP_003482768.1|	-	4.3e-07	29.6	0.0	0.001	18.5	0.0	2.2	2	0	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.13	gi|289596072|ref|YP_003482768.1|	-	5.2e-05	22.6	0.0	0.00029	20.2	0.0	2.0	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|289596072|ref|YP_003482768.1|	-	0.00019	21.0	0.1	0.022	14.3	0.0	2.2	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
Gmad1	PF10647.4	gi|289596072|ref|YP_003482768.1|	-	0.00031	20.2	0.0	0.52	9.6	0.0	2.6	2	1	0	2	2	2	2	Lipoprotein	LpqB	beta-propeller	domain
Abhydrolase_3	PF07859.8	gi|289596072|ref|YP_003482768.1|	-	0.0016	18.0	0.0	0.021	14.3	0.0	2.2	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
DUF2920	PF11144.3	gi|289596072|ref|YP_003482768.1|	-	0.0017	17.4	0.2	1.3	7.9	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2920)
Esterase	PF00756.15	gi|289596072|ref|YP_003482768.1|	-	0.0034	16.8	0.0	0.02	14.3	0.0	2.1	3	0	0	3	3	3	1	Putative	esterase
PD40	PF07676.7	gi|289596072|ref|YP_003482768.1|	-	0.041	13.5	3.0	3.2	7.4	0.0	3.9	4	1	0	4	4	4	0	WD40-like	Beta	Propeller	Repeat
PhoPQ_related	PF10142.4	gi|289596072|ref|YP_003482768.1|	-	0.047	12.1	0.2	0.12	10.8	0.1	1.6	1	1	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
DPPIV_N	PF00930.16	gi|289596072|ref|YP_003482768.1|	-	0.054	12.0	0.0	0.62	8.5	0.0	2.6	3	0	0	3	3	3	0	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
TrmB	PF01978.14	gi|289596073|ref|YP_003482769.1|	-	7.4e-06	25.5	0.1	1e-05	25.1	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
RuvB_C	PF05491.8	gi|289596073|ref|YP_003482769.1|	-	0.00032	20.2	0.2	0.00047	19.7	0.1	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_Crp_2	PF13545.1	gi|289596073|ref|YP_003482769.1|	-	0.00072	19.2	0.0	0.0011	18.6	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596073|ref|YP_003482769.1|	-	0.0009	18.5	0.3	0.0015	17.8	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|289596073|ref|YP_003482769.1|	-	0.0029	17.2	0.2	0.0046	16.6	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fib_alpha	PF08702.5	gi|289596073|ref|YP_003482769.1|	-	0.0058	16.7	1.6	0.31	11.1	0.1	2.1	2	0	0	2	2	2	1	Fibrinogen	alpha/beta	chain	family
DUF1512	PF07431.7	gi|289596073|ref|YP_003482769.1|	-	0.0068	15.2	0.8	0.0071	15.1	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
Ribosomal_S19e	PF01090.14	gi|289596073|ref|YP_003482769.1|	-	0.0084	15.5	0.0	0.015	14.7	0.0	1.5	1	1	0	1	1	1	1	Ribosomal	protein	S19e
PRK	PF00485.13	gi|289596073|ref|YP_003482769.1|	-	0.011	15.3	0.1	0.018	14.5	0.1	1.3	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
HTH_12	PF08461.5	gi|289596073|ref|YP_003482769.1|	-	0.012	15.3	0.3	0.033	13.8	0.0	2.0	1	1	1	2	2	2	0	Ribonuclease	R	winged-helix	domain
Phage_rep_org_N	PF09681.5	gi|289596073|ref|YP_003482769.1|	-	0.015	14.8	0.2	0.035	13.6	0.0	1.6	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Rrf2	PF02082.15	gi|289596073|ref|YP_003482769.1|	-	0.033	14.3	0.1	0.043	13.9	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DUF2513	PF10711.4	gi|289596073|ref|YP_003482769.1|	-	0.052	13.6	0.0	0.074	13.1	0.0	1.4	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HTH_45	PF14947.1	gi|289596073|ref|YP_003482769.1|	-	0.076	12.8	0.0	0.13	12.0	0.0	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix
RPA_C	PF08784.6	gi|289596073|ref|YP_003482769.1|	-	0.078	13.4	0.1	0.14	12.6	0.1	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF2250	PF10007.4	gi|289596073|ref|YP_003482769.1|	-	0.083	12.8	0.9	0.26	11.2	0.3	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_20	PF12840.2	gi|289596073|ref|YP_003482769.1|	-	0.088	12.6	0.1	0.46	10.3	0.0	2.0	1	1	1	2	2	2	0	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|289596073|ref|YP_003482769.1|	-	0.093	12.2	1.7	1.4	8.4	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
FeoC	PF09012.5	gi|289596073|ref|YP_003482769.1|	-	0.096	12.4	0.0	0.18	11.5	0.0	1.6	1	1	0	1	1	1	0	FeoC	like	transcriptional	regulator
Eaf7	PF07904.8	gi|289596073|ref|YP_003482769.1|	-	0.11	12.5	0.3	0.18	11.7	0.1	1.6	1	1	0	1	1	1	0	Chromatin	modification-related	protein	EAF7
Adenylsucc_synt	PF00709.16	gi|289596074|ref|YP_003482770.1|	-	1.3e-137	458.9	0.0	1.5e-137	458.6	0.0	1.0	1	0	0	1	1	1	1	Adenylosuccinate	synthetase
TFIIE_alpha	PF02002.12	gi|289596075|ref|YP_003482771.1|	-	0.018	14.5	1.3	0.027	13.9	0.9	1.4	1	0	0	1	1	1	0	TFIIE	alpha	subunit
ABC_tran	PF00005.22	gi|289596076|ref|YP_003482772.1|	-	1.6e-39	135.3	0.0	1.8e-18	67.1	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|289596076|ref|YP_003482772.1|	-	7.1e-13	49.1	11.6	0.0016	18.4	0.0	4.4	2	2	1	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|289596076|ref|YP_003482772.1|	-	2e-11	43.5	9.8	3.5e-06	26.4	2.0	3.8	2	2	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.10	gi|289596076|ref|YP_003482772.1|	-	8.4e-08	31.6	3.2	2.1e-07	30.3	2.2	1.7	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_17	PF13207.1	gi|289596076|ref|YP_003482772.1|	-	7.2e-07	30.0	0.9	0.063	14.0	0.0	3.2	2	1	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|289596076|ref|YP_003482772.1|	-	1.7e-06	28.5	0.3	0.042	14.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Fer4	PF00037.22	gi|289596076|ref|YP_003482772.1|	-	2.1e-06	27.0	4.1	2.1e-06	27.0	2.8	1.8	2	0	0	2	2	1	1	4Fe-4S	binding	domain
AAA_18	PF13238.1	gi|289596076|ref|YP_003482772.1|	-	3.3e-05	24.1	0.6	0.043	14.1	0.2	3.1	2	1	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|289596076|ref|YP_003482772.1|	-	0.00021	20.5	1.5	0.043	12.9	0.0	3.1	3	0	0	3	3	3	1	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|289596076|ref|YP_003482772.1|	-	0.00035	20.2	3.2	0.04	13.6	0.2	2.8	3	0	0	3	3	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|289596076|ref|YP_003482772.1|	-	0.00039	19.8	0.0	0.23	11.0	0.0	2.5	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Fer4_21	PF14697.1	gi|289596076|ref|YP_003482772.1|	-	0.00046	19.9	7.1	0.00079	19.2	4.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596076|ref|YP_003482772.1|	-	0.00049	19.8	2.2	0.00049	19.8	1.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
SbcCD_C	PF13558.1	gi|289596076|ref|YP_003482772.1|	-	0.00059	19.6	0.1	1.4	8.8	0.0	3.3	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_14	PF13173.1	gi|289596076|ref|YP_003482772.1|	-	0.00099	19.0	0.5	0.74	9.7	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
AAA	PF00004.24	gi|289596076|ref|YP_003482772.1|	-	0.0013	18.9	0.3	0.66	10.1	0.0	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|289596076|ref|YP_003482772.1|	-	0.0017	17.8	0.0	3.9	6.8	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
UPF0079	PF02367.12	gi|289596076|ref|YP_003482772.1|	-	0.0042	16.7	0.1	0.59	9.7	0.0	2.5	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
RNA_helicase	PF00910.17	gi|289596076|ref|YP_003482772.1|	-	0.0044	17.1	0.0	2.5	8.3	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
VirE	PF05272.6	gi|289596076|ref|YP_003482772.1|	-	0.0084	15.5	0.0	2.3	7.6	0.0	2.5	2	0	0	2	2	2	1	Virulence-associated	protein	E
AAA_33	PF13671.1	gi|289596076|ref|YP_003482772.1|	-	0.0085	15.9	0.2	0.48	10.2	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
AAA_28	PF13521.1	gi|289596076|ref|YP_003482772.1|	-	0.011	15.7	0.1	6.2	6.7	0.0	2.8	2	0	0	2	2	2	0	AAA	domain
Fer4_2	PF12797.2	gi|289596076|ref|YP_003482772.1|	-	0.012	15.4	2.4	0.012	15.4	1.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Miro	PF08477.8	gi|289596076|ref|YP_003482772.1|	-	0.013	16.0	0.2	0.97	9.9	0.0	3.0	3	0	0	3	3	2	0	Miro-like	protein
AAA_22	PF13401.1	gi|289596076|ref|YP_003482772.1|	-	0.013	15.6	1.4	3.6	7.7	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
Fer4_10	PF13237.1	gi|289596076|ref|YP_003482772.1|	-	0.016	15.0	8.4	0.03	14.1	5.8	1.5	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_15	PF13175.1	gi|289596076|ref|YP_003482772.1|	-	0.017	14.2	5.2	1.1	8.2	0.0	3.9	3	1	0	4	4	4	0	AAA	ATPase	domain
Fer4_7	PF12838.2	gi|289596076|ref|YP_003482772.1|	-	0.018	15.4	8.4	0.036	14.4	5.8	1.5	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_16	PF13191.1	gi|289596076|ref|YP_003482772.1|	-	0.02	14.8	0.3	4	7.3	0.1	2.8	2	1	0	2	2	2	0	AAA	ATPase	domain
SRP54	PF00448.17	gi|289596076|ref|YP_003482772.1|	-	0.032	13.6	1.9	2.5	7.5	0.1	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Rad17	PF03215.10	gi|289596076|ref|YP_003482772.1|	-	0.035	12.8	0.3	1.1	7.8	0.2	2.7	2	1	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
Fer4_9	PF13187.1	gi|289596076|ref|YP_003482772.1|	-	0.036	14.3	9.6	0.073	13.3	6.6	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_30	PF13604.1	gi|289596076|ref|YP_003482772.1|	-	0.037	13.5	2.6	3.5	7.1	0.1	2.8	3	0	0	3	3	3	0	AAA	domain
Spore_IV_A	PF09547.5	gi|289596076|ref|YP_003482772.1|	-	0.044	12.4	2.5	1.3	7.6	0.1	2.9	2	1	1	3	3	3	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
MMR_HSR1	PF01926.18	gi|289596076|ref|YP_003482772.1|	-	0.047	13.6	2.5	8.2	6.4	0.1	3.0	3	1	0	3	3	2	0	50S	ribosome-binding	GTPase
T2SE	PF00437.15	gi|289596076|ref|YP_003482772.1|	-	0.056	12.3	0.2	8.4	5.1	0.0	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Fer4_15	PF13459.1	gi|289596076|ref|YP_003482772.1|	-	0.073	13.6	0.6	0.23	12.0	0.4	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|289596076|ref|YP_003482772.1|	-	0.082	13.6	0.1	0.082	13.6	0.1	2.0	2	0	0	2	2	1	0	4Fe-4S	double	cluster	binding	domain
AAA_19	PF13245.1	gi|289596076|ref|YP_003482772.1|	-	0.21	11.3	5.2	6.3	6.6	0.1	2.8	3	0	0	3	3	2	0	Part	of	AAA	domain
NACHT	PF05729.7	gi|289596076|ref|YP_003482772.1|	-	0.25	11.0	0.6	21	4.6	0.1	2.5	2	0	0	2	2	2	0	NACHT	domain
ArgK	PF03308.11	gi|289596076|ref|YP_003482772.1|	-	0.74	8.5	3.6	3.4	6.3	0.1	2.7	3	0	0	3	3	3	0	ArgK	protein
DUF4546	PF15079.1	gi|289596076|ref|YP_003482772.1|	-	1	8.4	3.6	0.78	8.8	0.1	2.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4546)
Fer4_4	PF12800.2	gi|289596076|ref|YP_003482772.1|	-	5.9	7.4	11.5	1.3	9.5	1.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
ERCC4	PF02732.10	gi|289596077|ref|YP_003482773.1|	-	2.4e-15	56.5	0.0	3.1e-15	56.1	0.0	1.2	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|289596077|ref|YP_003482773.1|	-	8e-13	48.0	0.1	1.3e-12	47.4	0.1	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|289596077|ref|YP_003482773.1|	-	5.3e-11	42.5	0.2	1.1e-10	41.5	0.2	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|289596077|ref|YP_003482773.1|	-	4.6e-07	29.1	0.5	0.00016	21.1	0.1	2.4	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.15	gi|289596077|ref|YP_003482773.1|	-	2.1e-05	24.6	0.3	0.00067	19.8	0.1	2.4	1	1	1	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_3	PF12836.2	gi|289596077|ref|YP_003482773.1|	-	6.1e-05	22.8	0.2	0.0034	17.2	0.2	2.4	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|289596077|ref|YP_003482773.1|	-	0.0066	16.6	0.3	3.5	7.8	0.0	2.6	1	1	1	2	2	2	2	Helix-hairpin-helix	domain
IMS_HHH	PF11798.3	gi|289596077|ref|YP_003482773.1|	-	0.034	14.1	0.0	0.79	9.9	0.0	2.7	2	0	0	2	2	2	0	IMS	family	HHH	motif
HRDC	PF00570.18	gi|289596077|ref|YP_003482773.1|	-	0.1	12.3	0.2	0.73	9.5	0.0	2.4	2	1	0	2	2	2	0	HRDC	domain
DEAD	PF00270.24	gi|289596078|ref|YP_003482774.1|	-	9.2e-29	100.0	0.0	5.2e-28	97.6	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
HHH_5	PF14520.1	gi|289596078|ref|YP_003482774.1|	-	9.1e-10	38.5	2.1	1.5e-09	37.9	0.1	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
ResIII	PF04851.10	gi|289596078|ref|YP_003482774.1|	-	6.1e-09	35.9	0.0	3.8e-08	33.3	0.0	2.3	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|289596078|ref|YP_003482774.1|	-	2.6e-08	33.6	0.0	9.4e-08	31.8	0.0	2.0	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH_2	PF12826.2	gi|289596078|ref|YP_003482774.1|	-	3.2e-08	33.3	0.0	1.5e-06	27.9	0.0	3.1	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|289596078|ref|YP_003482774.1|	-	5.9e-06	25.6	0.1	0.0037	16.8	0.2	2.9	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
IMS_HHH	PF11798.3	gi|289596078|ref|YP_003482774.1|	-	7e-05	22.6	0.3	0.36	10.9	0.1	2.8	2	0	0	2	2	2	2	IMS	family	HHH	motif
DNA_pol_lambd_f	PF10391.4	gi|289596078|ref|YP_003482774.1|	-	0.011	15.2	0.0	0.048	13.2	0.0	2.1	1	1	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
HTH_24	PF13412.1	gi|289596079|ref|YP_003482775.1|	-	6.4e-17	60.6	1.8	9.9e-17	60.0	1.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|289596079|ref|YP_003482775.1|	-	1.6e-14	53.3	0.1	3.2e-14	52.3	0.0	1.5	2	0	0	2	2	1	1	AsnC	family
HTH_AsnC-type	PF13404.1	gi|289596079|ref|YP_003482775.1|	-	4e-14	51.8	0.8	6.2e-14	51.2	0.5	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|289596079|ref|YP_003482775.1|	-	6.5e-09	35.4	0.0	1.2e-08	34.6	0.0	1.3	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|289596079|ref|YP_003482775.1|	-	2.5e-08	33.4	0.2	4.4e-08	32.6	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
Sigma70_r4	PF04545.11	gi|289596079|ref|YP_003482775.1|	-	1.1e-06	27.8	0.0	2.1e-06	26.9	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
TrmB	PF01978.14	gi|289596079|ref|YP_003482775.1|	-	1.9e-06	27.4	0.0	4.3e-06	26.3	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_DeoR	PF08220.7	gi|289596079|ref|YP_003482775.1|	-	8.5e-06	25.2	0.2	1.3e-05	24.6	0.2	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|289596079|ref|YP_003482775.1|	-	1.2e-05	24.6	0.1	3.5e-05	23.1	0.1	1.8	1	1	0	1	1	1	1	Sigma-70,	region	4
HTH_28	PF13518.1	gi|289596079|ref|YP_003482775.1|	-	2.1e-05	24.4	0.1	3.8e-05	23.6	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|289596079|ref|YP_003482775.1|	-	2.7e-05	23.6	0.1	5.4e-05	22.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_20	PF12840.2	gi|289596079|ref|YP_003482775.1|	-	7.3e-05	22.4	0.0	0.00011	21.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|289596079|ref|YP_003482775.1|	-	8.6e-05	22.0	0.1	0.00026	20.4	0.1	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	Fis	family
HTH_5	PF01022.15	gi|289596079|ref|YP_003482775.1|	-	0.00011	21.7	0.0	0.0002	20.9	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|289596079|ref|YP_003482775.1|	-	0.00016	21.3	0.0	0.00024	20.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|289596079|ref|YP_003482775.1|	-	0.0003	20.4	0.1	0.0005	19.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_Tnp_ISL3	PF13542.1	gi|289596079|ref|YP_003482775.1|	-	0.00087	18.4	0.0	0.0018	17.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_10	PF04967.7	gi|289596079|ref|YP_003482775.1|	-	0.0016	17.9	0.1	0.0044	16.5	0.0	1.8	2	0	0	2	2	1	1	HTH	DNA	binding	domain
HTH_27	PF13463.1	gi|289596079|ref|YP_003482775.1|	-	0.0017	18.6	0.0	0.0025	18.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|289596079|ref|YP_003482775.1|	-	0.0022	17.4	0.7	0.0061	16.0	0.1	1.9	1	1	1	2	2	2	1	TFIIE	alpha	subunit
HxlR	PF01638.12	gi|289596079|ref|YP_003482775.1|	-	0.0027	17.3	0.0	0.0065	16.0	0.0	1.6	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.1	gi|289596079|ref|YP_003482775.1|	-	0.0028	17.6	0.0	0.0055	16.7	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2089	PF09862.4	gi|289596079|ref|YP_003482775.1|	-	0.0054	16.5	0.1	0.011	15.4	0.1	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2089)
GerE	PF00196.14	gi|289596079|ref|YP_003482775.1|	-	0.0057	15.9	0.1	0.012	14.8	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
Rrf2	PF02082.15	gi|289596079|ref|YP_003482775.1|	-	0.0059	16.7	0.0	0.015	15.3	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_38	PF13936.1	gi|289596079|ref|YP_003482775.1|	-	0.0095	15.4	0.1	0.018	14.5	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|289596079|ref|YP_003482775.1|	-	0.01	15.6	0.0	0.025	14.3	0.0	1.8	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_6	PF01418.12	gi|289596079|ref|YP_003482775.1|	-	0.011	15.5	0.0	0.02	14.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
FaeA	PF04703.7	gi|289596079|ref|YP_003482775.1|	-	0.013	15.6	0.0	0.023	14.8	0.0	1.4	1	0	0	1	1	1	0	FaeA-like	protein
HTH_29	PF13551.1	gi|289596079|ref|YP_003482775.1|	-	0.013	15.6	0.1	0.022	14.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_12	PF08461.5	gi|289596079|ref|YP_003482775.1|	-	0.023	14.4	0.5	0.1	12.3	0.3	2.1	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF2042	PF09743.4	gi|289596079|ref|YP_003482775.1|	-	0.032	13.5	0.1	0.051	12.8	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2042)
HTH_9	PF08221.6	gi|289596079|ref|YP_003482775.1|	-	0.032	14.0	0.1	0.34	10.8	0.0	2.0	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
FeoC	PF09012.5	gi|289596079|ref|YP_003482775.1|	-	0.038	13.6	0.0	0.062	13.0	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
DDRGK	PF09756.4	gi|289596079|ref|YP_003482775.1|	-	0.042	13.2	0.1	0.072	12.4	0.1	1.3	1	0	0	1	1	1	0	DDRGK	domain
DUF2250	PF10007.4	gi|289596079|ref|YP_003482775.1|	-	0.046	13.6	0.1	0.095	12.6	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PCI	PF01399.22	gi|289596079|ref|YP_003482775.1|	-	0.049	13.9	0.0	0.095	13.0	0.0	1.4	1	0	0	1	1	1	0	PCI	domain
DUF977	PF06163.6	gi|289596079|ref|YP_003482775.1|	-	0.06	13.0	0.1	0.12	12.1	0.1	1.4	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_30	PF13556.1	gi|289596079|ref|YP_003482775.1|	-	0.061	12.9	0.0	0.16	11.6	0.0	1.7	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
Mga	PF05043.8	gi|289596079|ref|YP_003482775.1|	-	0.064	13.5	0.0	0.11	12.8	0.0	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_19	PF12844.2	gi|289596079|ref|YP_003482775.1|	-	0.082	12.9	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Ribosomal_L22	PF00237.14	gi|289596079|ref|YP_003482775.1|	-	0.088	12.7	0.3	0.23	11.4	0.0	1.8	2	2	0	2	2	1	0	Ribosomal	protein	L22p/L17e
Fe_dep_repress	PF01325.14	gi|289596079|ref|YP_003482775.1|	-	0.11	12.5	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
SBP_bac_3	PF00497.15	gi|289596080|ref|YP_003482776.1|	-	1.2e-48	165.2	0.1	1.9e-48	164.6	0.1	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
PAS_8	PF13188.1	gi|289596080|ref|YP_003482776.1|	-	2.9e-06	26.9	0.0	7.7e-06	25.5	0.0	1.7	1	0	0	1	1	1	1	PAS	domain
PAS	PF00989.19	gi|289596080|ref|YP_003482776.1|	-	3.9e-05	23.3	0.0	0.00021	21.0	0.0	2.2	2	1	1	3	3	3	1	PAS	fold
PAS_9	PF13426.1	gi|289596080|ref|YP_003482776.1|	-	0.0013	19.0	0.1	0.017	15.5	0.0	2.5	1	1	1	2	2	2	1	PAS	domain
CathepsinC_exc	PF08773.6	gi|289596080|ref|YP_003482776.1|	-	0.014	15.5	0.0	0.042	14.0	0.0	1.8	1	0	0	1	1	1	0	Cathepsin	C	exclusion	domain
PAS_3	PF08447.6	gi|289596080|ref|YP_003482776.1|	-	0.04	14.0	0.1	3.8	7.6	0.0	2.5	1	1	1	2	2	2	0	PAS	fold
Lig_chan-Glu_bd	PF10613.4	gi|289596080|ref|YP_003482776.1|	-	0.041	13.8	0.0	0.11	12.4	0.0	1.7	1	0	0	1	1	1	0	Ligated	ion	channel	L-glutamate-	and	glycine-binding	site
PAS_4	PF08448.5	gi|289596080|ref|YP_003482776.1|	-	0.072	13.1	0.0	0.15	12.0	0.0	1.5	1	0	0	1	1	1	0	PAS	fold
SLAC1	PF03595.12	gi|289596081|ref|YP_003482777.1|	-	1.2e-55	188.4	50.4	1.4e-55	188.2	34.9	1.0	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
AAA	PF00004.24	gi|289596082|ref|YP_003482778.1|	-	1.3e-100	332.8	0.0	1e-49	168.1	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|289596082|ref|YP_003482778.1|	-	4.5e-30	103.4	0.2	2.1e-29	101.2	0.3	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|289596082|ref|YP_003482778.1|	-	1.4e-17	63.4	0.0	1.3e-08	34.2	0.0	2.7	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|289596082|ref|YP_003482778.1|	-	1.1e-16	61.3	0.0	3.6e-08	33.6	0.0	2.9	3	0	0	3	3	2	2	AAA	ATPase	domain
AAA_2	PF07724.9	gi|289596082|ref|YP_003482778.1|	-	4e-16	59.4	0.0	1.5e-07	31.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|289596082|ref|YP_003482778.1|	-	1.8e-15	57.2	0.5	2.8e-06	27.5	0.0	4.4	2	2	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|289596082|ref|YP_003482778.1|	-	3.1e-13	50.6	0.1	7.8e-06	26.7	0.0	3.1	2	1	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|289596082|ref|YP_003482778.1|	-	4.3e-13	49.2	0.0	1.6e-06	28.0	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|289596082|ref|YP_003482778.1|	-	8.9e-13	48.1	0.6	0.00014	21.6	0.1	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
CDC48_2	PF02933.12	gi|289596082|ref|YP_003482778.1|	-	4.4e-12	45.4	1.9	3.2e-11	42.7	0.1	3.1	3	1	0	3	3	3	1	Cell	division	protein	48	(CDC48),	domain	2
TIP49	PF06068.8	gi|289596082|ref|YP_003482778.1|	-	5e-11	41.9	0.0	0.00023	20.0	0.0	2.8	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_33	PF13671.1	gi|289596082|ref|YP_003482778.1|	-	3.2e-10	40.0	0.0	9.5e-05	22.2	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|289596082|ref|YP_003482778.1|	-	7e-10	38.3	0.0	0.00055	19.0	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|289596082|ref|YP_003482778.1|	-	1.2e-09	37.8	0.0	0.0011	18.4	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.13	gi|289596082|ref|YP_003482778.1|	-	4e-09	36.4	0.0	6.5e-05	22.6	0.0	2.4	2	0	0	2	2	2	2	Bacterial	dnaA	protein
AAA_19	PF13245.1	gi|289596082|ref|YP_003482778.1|	-	5.1e-09	35.7	0.8	0.0023	17.6	0.0	2.7	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|289596082|ref|YP_003482778.1|	-	4.7e-08	32.6	0.2	0.01	15.2	0.0	3.8	2	2	0	2	2	2	2	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|289596082|ref|YP_003482778.1|	-	5.6e-08	33.1	1.5	0.0049	17.1	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|289596082|ref|YP_003482778.1|	-	8.4e-08	32.1	0.4	0.003	17.3	0.0	3.7	3	1	1	4	4	3	2	Archaeal	ATPase
RNA_helicase	PF00910.17	gi|289596082|ref|YP_003482778.1|	-	1.1e-07	32.0	0.0	0.018	15.2	0.0	2.9	2	0	0	2	2	2	2	RNA	helicase
AAA_28	PF13521.1	gi|289596082|ref|YP_003482778.1|	-	3.2e-07	30.4	0.0	0.024	14.6	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|289596082|ref|YP_003482778.1|	-	3.3e-07	29.6	0.1	0.021	13.9	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|289596082|ref|YP_003482778.1|	-	3.8e-07	29.9	1.7	0.044	13.3	0.0	3.5	4	0	0	4	4	3	2	AAA	domain
AAA_25	PF13481.1	gi|289596082|ref|YP_003482778.1|	-	7.6e-07	28.7	10.6	0.43	9.9	0.2	4.3	2	2	2	4	4	4	3	AAA	domain
DUF815	PF05673.8	gi|289596082|ref|YP_003482778.1|	-	8.1e-07	28.2	0.0	0.075	11.9	0.0	3.3	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.7	gi|289596082|ref|YP_003482778.1|	-	2.1e-06	27.5	0.1	0.32	10.6	0.0	4.2	2	2	0	3	3	3	2	NACHT	domain
PhoH	PF02562.11	gi|289596082|ref|YP_003482778.1|	-	8.4e-06	25.1	0.9	0.17	11.0	0.0	3.1	3	0	0	3	3	3	2	PhoH-like	protein
KaiC	PF06745.8	gi|289596082|ref|YP_003482778.1|	-	1.1e-05	24.7	2.6	0.34	9.9	0.0	4.2	3	1	1	4	4	4	2	KaiC
Sigma54_activ_2	PF14532.1	gi|289596082|ref|YP_003482778.1|	-	1.8e-05	24.7	0.0	0.23	11.5	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
DUF2075	PF09848.4	gi|289596082|ref|YP_003482778.1|	-	3.3e-05	23.0	0.0	0.14	11.1	0.0	2.4	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
NB-ARC	PF00931.17	gi|289596082|ref|YP_003482778.1|	-	5.9e-05	22.0	0.0	0.15	10.8	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
Parvo_NS1	PF01057.12	gi|289596082|ref|YP_003482778.1|	-	6.4e-05	21.9	0.1	0.31	9.8	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.6	gi|289596082|ref|YP_003482778.1|	-	6.8e-05	22.4	0.0	0.43	10.1	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|289596082|ref|YP_003482778.1|	-	7.6e-05	22.4	4.5	2.5	7.7	0.0	5.1	3	2	1	5	5	5	1	NTPase
ABC_tran	PF00005.22	gi|289596082|ref|YP_003482778.1|	-	7.9e-05	22.9	0.0	0.69	10.2	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
UPF0079	PF02367.12	gi|289596082|ref|YP_003482778.1|	-	0.00051	19.6	0.4	1.1	8.8	0.0	3.0	2	1	1	3	3	3	1	Uncharacterised	P-loop	hydrolase	UPF0079
ATP-synt_ab	PF00006.20	gi|289596082|ref|YP_003482778.1|	-	0.00071	19.1	0.0	0.87	9.0	0.0	2.5	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_11	PF13086.1	gi|289596082|ref|YP_003482778.1|	-	0.0011	18.5	0.0	1.7	8.1	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
T2SE	PF00437.15	gi|289596082|ref|YP_003482778.1|	-	0.0015	17.5	0.0	1.7	7.4	0.0	2.6	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
AAA_30	PF13604.1	gi|289596082|ref|YP_003482778.1|	-	0.0015	18.1	0.0	2.4	7.6	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
SKI	PF01202.17	gi|289596082|ref|YP_003482778.1|	-	0.0034	17.2	0.0	2.8	7.7	0.0	2.7	2	0	0	2	2	2	0	Shikimate	kinase
AFG1_ATPase	PF03969.11	gi|289596082|ref|YP_003482778.1|	-	0.0039	16.0	0.0	1.3	7.6	0.0	2.6	2	0	0	2	2	2	1	AFG1-like	ATPase
ResIII	PF04851.10	gi|289596082|ref|YP_003482778.1|	-	0.0088	15.8	0.0	6.2	6.6	0.0	2.6	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_21	PF13304.1	gi|289596082|ref|YP_003482778.1|	-	0.025	14.5	1.8	13	5.5	0.2	3.6	3	1	0	3	3	3	0	AAA	domain
AAA_29	PF13555.1	gi|289596082|ref|YP_003482778.1|	-	0.042	13.3	0.0	8.8	5.9	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
KTI12	PF08433.5	gi|289596082|ref|YP_003482778.1|	-	0.084	12.0	0.0	12	4.9	0.0	2.6	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
CPT	PF07931.7	gi|289596082|ref|YP_003482778.1|	-	0.1	12.2	0.0	9.4	5.8	0.0	2.5	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
IPT	PF01745.11	gi|289596082|ref|YP_003482778.1|	-	0.11	11.6	0.1	14	4.7	0.0	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
DAP3	PF10236.4	gi|289596082|ref|YP_003482778.1|	-	0.13	11.1	0.0	13	4.6	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_10	PF12846.2	gi|289596082|ref|YP_003482778.1|	-	0.17	11.3	1.1	19	4.5	0.1	3.4	2	2	0	2	2	2	0	AAA-like	domain
PPV_E1_C	PF00519.12	gi|289596082|ref|YP_003482778.1|	-	0.18	10.3	0.0	3.8	6.0	0.0	2.1	2	0	0	2	2	2	0	Papillomavirus	helicase
Zot	PF05707.7	gi|289596082|ref|YP_003482778.1|	-	0.28	10.6	5.9	41	3.5	0.1	5.6	4	3	1	5	5	3	0	Zonular	occludens	toxin	(Zot)
AAA_23	PF13476.1	gi|289596082|ref|YP_003482778.1|	-	0.4	10.9	1.8	36	4.6	0.0	3.0	4	0	0	4	4	2	0	AAA	domain
HSP20	PF00011.16	gi|289596083|ref|YP_003482779.1|	-	7.2e-19	67.5	3.0	1e-18	67.0	2.1	1.2	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
PIH1	PF08190.7	gi|289596083|ref|YP_003482779.1|	-	0.00064	19.2	0.4	0.0007	19.1	0.3	1.1	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
CS	PF04969.11	gi|289596083|ref|YP_003482779.1|	-	0.005	17.3	0.8	0.0081	16.6	0.5	1.4	1	0	0	1	1	1	1	CS	domain
Slu7	PF11708.3	gi|289596083|ref|YP_003482779.1|	-	0.0065	16.2	1.1	0.0087	15.8	0.7	1.3	1	1	0	1	1	1	1	Pre-mRNA	splicing	Prp18-interacting	factor
PrcB_C	PF14343.1	gi|289596083|ref|YP_003482779.1|	-	0.093	12.4	0.8	0.21	11.3	0.1	1.9	2	1	0	2	2	2	0	PrcB	C-terminal
SBP_bac_5	PF00496.17	gi|289596084|ref|YP_003482780.1|	-	3.1e-95	319.1	10.7	3.8e-95	318.8	7.4	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF4330	PF14221.1	gi|289596084|ref|YP_003482780.1|	-	0.094	12.5	0.8	0.39	10.5	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4330)
BPD_transp_1	PF00528.17	gi|289596085|ref|YP_003482781.1|	-	1.4e-44	151.8	16.5	1.4e-44	151.8	11.4	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|289596086|ref|YP_003482782.1|	-	1.8e-24	86.3	11.0	1.8e-24	86.3	7.6	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|289596086|ref|YP_003482782.1|	-	4.6e-08	32.3	1.8	4.6e-08	32.3	1.2	3.3	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
FtsX	PF02687.16	gi|289596086|ref|YP_003482782.1|	-	0.0025	17.5	1.4	0.0025	17.5	1.0	3.2	3	0	0	3	3	3	1	FtsX-like	permease	family
DUF2556	PF10831.3	gi|289596086|ref|YP_003482782.1|	-	4.9	6.8	5.9	0.87	9.2	0.9	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2556)
ABC_tran	PF00005.22	gi|289596087|ref|YP_003482783.1|	-	2.5e-27	95.8	0.0	3.5e-27	95.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596087|ref|YP_003482783.1|	-	3.5e-18	65.7	0.0	7.2e-18	64.7	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289596087|ref|YP_003482783.1|	-	1.8e-12	47.8	1.7	9.6e-10	38.8	0.5	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|289596087|ref|YP_003482783.1|	-	1.3e-06	27.8	0.3	2.5e-06	26.8	0.2	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|289596087|ref|YP_003482783.1|	-	7.4e-05	22.2	0.0	0.00012	21.5	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|289596087|ref|YP_003482783.1|	-	0.00013	21.1	0.3	0.21	10.6	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_10	PF12846.2	gi|289596087|ref|YP_003482783.1|	-	0.00063	19.2	0.4	0.71	9.2	0.1	2.3	1	1	1	2	2	2	2	AAA-like	domain
AAA_16	PF13191.1	gi|289596087|ref|YP_003482783.1|	-	0.001	19.0	0.0	0.0031	17.5	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289596087|ref|YP_003482783.1|	-	0.0013	18.8	0.2	0.009	16.1	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|289596087|ref|YP_003482783.1|	-	0.0024	17.0	0.0	0.0054	15.9	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|289596087|ref|YP_003482783.1|	-	0.0029	17.9	0.2	0.0081	16.4	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
ABC_ATPase	PF09818.4	gi|289596087|ref|YP_003482783.1|	-	0.0035	15.9	0.2	0.81	8.1	0.0	2.1	2	0	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_25	PF13481.1	gi|289596087|ref|YP_003482783.1|	-	0.0039	16.6	0.2	0.14	11.5	0.0	2.5	2	1	1	3	3	3	1	AAA	domain
tRNA_lig_kinase	PF08303.6	gi|289596087|ref|YP_003482783.1|	-	0.0063	16.4	0.0	0.013	15.3	0.0	1.5	1	0	0	1	1	1	1	tRNA	ligase	kinase	domain
AAA	PF00004.24	gi|289596087|ref|YP_003482783.1|	-	0.019	15.1	0.1	0.043	14.0	0.0	1.7	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|289596087|ref|YP_003482783.1|	-	0.02	14.7	0.0	0.047	13.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|289596087|ref|YP_003482783.1|	-	0.021	14.5	0.1	0.043	13.5	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP-synt_ab	PF00006.20	gi|289596087|ref|YP_003482783.1|	-	0.026	14.0	0.1	2.3	7.6	0.0	2.7	2	1	1	3	3	3	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|289596087|ref|YP_003482783.1|	-	0.032	15.0	0.2	0.088	13.6	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
PRK	PF00485.13	gi|289596087|ref|YP_003482783.1|	-	0.042	13.4	0.0	0.063	12.8	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Mg_chelatase	PF01078.16	gi|289596087|ref|YP_003482783.1|	-	0.056	12.5	0.0	0.19	10.8	0.0	1.7	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
APS_kinase	PF01583.15	gi|289596087|ref|YP_003482783.1|	-	0.074	12.7	0.0	0.21	11.2	0.0	1.8	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Sigma54_activ_2	PF14532.1	gi|289596087|ref|YP_003482783.1|	-	0.13	12.2	0.0	0.62	10.0	0.0	2.0	3	0	0	3	3	2	0	Sigma-54	interaction	domain
RNA_helicase	PF00910.17	gi|289596087|ref|YP_003482783.1|	-	0.14	12.3	0.0	0.32	11.1	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
NB-ARC	PF00931.17	gi|289596087|ref|YP_003482783.1|	-	0.15	10.9	0.0	0.24	10.2	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
ABC_tran	PF00005.22	gi|289596088|ref|YP_003482784.1|	-	2.5e-32	112.0	0.0	3.4e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596088|ref|YP_003482784.1|	-	3.8e-24	84.8	0.1	7e-24	83.9	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_22	PF13401.1	gi|289596088|ref|YP_003482784.1|	-	5.7e-05	23.2	1.9	0.00081	19.5	1.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|289596088|ref|YP_003482784.1|	-	0.00013	22.0	0.9	0.028	14.4	0.2	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|289596088|ref|YP_003482784.1|	-	0.0025	17.8	0.0	0.0035	17.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596088|ref|YP_003482784.1|	-	0.0087	15.5	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|289596088|ref|YP_003482784.1|	-	0.027	13.8	0.1	3.1	7.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|289596088|ref|YP_003482784.1|	-	0.051	13.0	0.1	7.1	5.9	0.0	2.3	2	0	0	2	2	2	0	AAA-like	domain
AAA_5	PF07728.9	gi|289596088|ref|YP_003482784.1|	-	0.071	12.8	0.1	0.34	10.6	0.1	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|289596088|ref|YP_003482784.1|	-	0.14	12.4	1.9	1.2	9.3	1.3	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4064	PF13273.1	gi|289596089|ref|YP_003482785.1|	-	0.47	10.5	7.2	0.14	12.2	1.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
RNase_PH	PF01138.16	gi|289596090|ref|YP_003482786.1|	-	2.4e-22	79.6	0.0	6.2e-22	78.3	0.0	1.6	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|289596090|ref|YP_003482786.1|	-	3.1e-11	43.0	0.2	5.9e-11	42.1	0.2	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
GATase_4	PF13230.1	gi|289596091|ref|YP_003482787.1|	-	5.1e-12	45.0	0.8	3.3e-06	26.0	0.0	3.9	1	1	1	3	3	3	3	Glutamine	amidotransferases	class-II
Metallophos_2	PF12850.2	gi|289596092|ref|YP_003482788.1|	-	1.4e-08	34.7	0.1	2.5e-08	33.9	0.0	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|289596092|ref|YP_003482788.1|	-	6.6e-05	22.3	0.3	0.00021	20.7	0.2	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
RibD_C	PF01872.12	gi|289596093|ref|YP_003482789.1|	-	7.9e-55	185.5	0.1	8.8e-55	185.4	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Prenyltransf	PF01255.14	gi|289596094|ref|YP_003482790.1|	-	5.3e-91	303.7	1.3	6.1e-91	303.4	0.9	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
GHL6	PF14871.1	gi|289596094|ref|YP_003482790.1|	-	0.0053	16.7	0.1	0.018	15.0	0.1	1.9	1	1	0	1	1	1	1	Hypothetical	glycosyl	hydrolase	6
AP_endonuc_2	PF01261.19	gi|289596094|ref|YP_003482790.1|	-	0.0075	15.5	0.4	0.03	13.6	0.3	2.0	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF4319	PF14203.1	gi|289596094|ref|YP_003482790.1|	-	0.12	11.9	0.7	1.6	8.3	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4319)
FtsA	PF14450.1	gi|289596094|ref|YP_003482790.1|	-	0.14	11.9	0.4	0.34	10.7	0.2	1.7	1	1	1	2	2	2	0	Cell	division	protein	FtsA
TrkA_N	PF02254.13	gi|289596095|ref|YP_003482791.1|	-	1.2e-17	64.0	2.2	3.4e-17	62.5	0.7	2.2	2	1	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|289596095|ref|YP_003482791.1|	-	5.7e-11	41.8	1.2	2.1e-10	40.0	0.3	2.2	2	0	0	2	2	2	1	TrkA-C	domain
TrkA_N	PF02254.13	gi|289596096|ref|YP_003482792.1|	-	8.1e-13	48.3	1.6	1.9e-12	47.2	1.1	1.6	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|289596096|ref|YP_003482792.1|	-	1.5e-10	40.5	0.0	4.8e-10	38.8	0.0	1.8	2	0	0	2	2	2	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|289596096|ref|YP_003482792.1|	-	2.9e-09	36.5	10.8	5.6e-09	35.5	7.5	1.4	1	0	0	1	1	1	1	Ion	channel
ABC2_membrane_5	PF13346.1	gi|289596096|ref|YP_003482792.1|	-	0.024	13.9	6.9	0.036	13.3	4.8	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Rpr2	PF04032.11	gi|289596098|ref|YP_003482794.1|	-	2.7e-23	81.6	0.5	3.3e-23	81.3	0.4	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF164	PF02591.10	gi|289596098|ref|YP_003482794.1|	-	0.012	15.3	0.3	0.025	14.3	0.2	1.5	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
C1_1	PF00130.17	gi|289596098|ref|YP_003482794.1|	-	0.025	14.3	0.7	0.038	13.7	0.5	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Cytochrome_C7	PF14522.1	gi|289596098|ref|YP_003482794.1|	-	0.027	14.1	0.1	0.039	13.5	0.1	1.2	1	0	0	1	1	1	0	Cytochrome	c7
zf-Sec23_Sec24	PF04810.10	gi|289596098|ref|YP_003482794.1|	-	0.72	9.4	2.8	8	6.1	0.3	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zf-BED	PF02892.10	gi|289596098|ref|YP_003482794.1|	-	6.5	6.6	7.3	3.1	7.6	0.8	2.3	1	1	1	2	2	2	0	BED	zinc	finger
Bac_DNA_binding	PF00216.16	gi|289596099|ref|YP_003482795.1|	-	2.7e-25	88.2	3.5	3.1e-25	88.0	2.4	1.0	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
DUF4496	PF14908.1	gi|289596099|ref|YP_003482795.1|	-	0.013	15.4	0.1	0.014	15.2	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4496)
UPF0114	PF03350.11	gi|289596099|ref|YP_003482795.1|	-	0.047	13.6	0.0	0.052	13.4	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	family,	UPF0114
HU-DNA_bdg	PF14848.1	gi|289596099|ref|YP_003482795.1|	-	0.051	13.2	0.3	0.073	12.8	0.2	1.3	1	1	0	1	1	1	0	DNA-binding	domain
DUF1044	PF06296.7	gi|289596099|ref|YP_003482795.1|	-	0.1	12.4	1.1	0.14	12.0	0.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1044)
AA_kinase	PF00696.23	gi|289596100|ref|YP_003482796.1|	-	4.3e-45	154.1	0.0	4.9e-45	153.9	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
AroM	PF07302.6	gi|289596100|ref|YP_003482796.1|	-	0.06	12.6	0.0	0.91	8.8	0.0	2.4	3	0	0	3	3	3	0	AroM	protein
CTP_transf_1	PF01148.15	gi|289596101|ref|YP_003482797.1|	-	1.5e-11	44.4	19.4	1.5e-11	44.4	13.4	1.4	1	1	0	1	1	1	1	Cytidylyltransferase	family
Peptidase_M32	PF02074.10	gi|289596102|ref|YP_003482798.1|	-	1.5e-219	729.7	4.3	1.8e-219	729.4	3.0	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
GIDA_assoc_3	PF13932.1	gi|289596102|ref|YP_003482798.1|	-	0.078	13.0	0.0	0.2	11.7	0.0	1.6	1	0	0	1	1	1	0	GidA	associated	domain	3
Aminotran_1_2	PF00155.16	gi|289596103|ref|YP_003482799.1|	-	8.6e-64	215.7	0.0	9.7e-64	215.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|289596103|ref|YP_003482799.1|	-	2.4e-07	30.1	0.0	3.6e-07	29.5	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|289596103|ref|YP_003482799.1|	-	6.2e-06	25.5	0.0	1e-05	24.8	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|289596103|ref|YP_003482799.1|	-	9.1e-06	24.6	0.0	1.5e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|289596103|ref|YP_003482799.1|	-	0.03	12.6	0.0	0.042	12.1	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
AFOR_C	PF01314.13	gi|289596104|ref|YP_003482800.1|	-	4.6e-130	433.7	0.1	5.6e-130	433.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|289596104|ref|YP_003482800.1|	-	6.9e-68	227.9	0.7	1.1e-67	227.3	0.5	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DUF3994	PF13159.1	gi|289596104|ref|YP_003482800.1|	-	0.15	12.3	3.2	12	6.2	0.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3994)
Amidinotransf	PF02274.12	gi|289596105|ref|YP_003482801.1|	-	5.4e-33	114.2	0.0	9.9e-33	113.4	0.0	1.4	1	1	0	1	1	1	1	Amidinotransferase
DUF2584	PF10763.4	gi|289596105|ref|YP_003482801.1|	-	0.019	14.7	0.1	0.22	11.3	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2584)
PepSY_2	PF13670.1	gi|289596105|ref|YP_003482801.1|	-	0.15	12.0	0.6	25	4.8	0.0	2.6	3	0	0	3	3	3	0	Peptidase	propeptide	and	YPEB	domain
tRNA-synt_1e	PF01406.14	gi|289596106|ref|YP_003482802.1|	-	1.1e-129	431.8	0.0	1.6e-129	431.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|289596106|ref|YP_003482802.1|	-	8.2e-16	57.6	0.9	4.4e-09	35.4	0.1	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|289596106|ref|YP_003482802.1|	-	4.3e-07	28.9	0.6	1.2e-05	24.1	0.0	2.7	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1	PF00133.17	gi|289596106|ref|YP_003482802.1|	-	6.7e-07	27.6	0.0	1.7e-05	23.0	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1d	PF00750.14	gi|289596106|ref|YP_003482802.1|	-	1.8e-05	23.7	0.8	0.012	14.4	0.0	3.8	3	1	0	4	4	4	1	tRNA	synthetases	class	I	(R)
DALR_2	PF09190.6	gi|289596106|ref|YP_003482802.1|	-	0.00024	21.3	0.7	0.00059	20.0	0.5	1.7	1	0	0	1	1	1	1	DALR	domain
Rad51	PF08423.6	gi|289596107|ref|YP_003482803.1|	-	5.4e-94	313.8	0.0	6.5e-94	313.6	0.0	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|289596107|ref|YP_003482803.1|	-	1.5e-13	50.5	0.1	2.1e-13	50.0	0.0	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
HHH_5	PF14520.1	gi|289596107|ref|YP_003482803.1|	-	3.2e-13	49.6	0.9	7.2e-13	48.5	0.6	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_25	PF13481.1	gi|289596107|ref|YP_003482803.1|	-	2.1e-12	46.8	0.0	2.8e-12	46.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|289596107|ref|YP_003482803.1|	-	4.5e-08	32.4	0.0	8e-08	31.6	0.0	1.4	1	0	0	1	1	1	1	KaiC
HHH	PF00633.18	gi|289596107|ref|YP_003482803.1|	-	1.7e-06	27.4	1.0	0.002	17.7	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_2	PF12826.2	gi|289596107|ref|YP_003482803.1|	-	2.6e-05	24.0	0.0	7.5e-05	22.5	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Cdd1	PF11731.3	gi|289596107|ref|YP_003482803.1|	-	4e-05	23.4	0.0	0.00011	22.0	0.0	1.8	1	1	0	1	1	1	1	Pathogenicity	locus
AAA_22	PF13401.1	gi|289596107|ref|YP_003482803.1|	-	0.0011	19.1	0.0	0.0022	18.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
HHH_8	PF14716.1	gi|289596107|ref|YP_003482803.1|	-	0.0015	18.7	1.3	0.17	12.1	0.0	2.8	3	0	0	3	3	2	1	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.4	gi|289596107|ref|YP_003482803.1|	-	0.0015	18.0	0.1	0.0059	16.1	0.0	2.1	3	0	0	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
SRP54	PF00448.17	gi|289596107|ref|YP_003482803.1|	-	0.012	15.0	0.0	0.019	14.3	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Arch_ATPase	PF01637.13	gi|289596107|ref|YP_003482803.1|	-	0.012	15.3	0.0	0.018	14.7	0.0	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
IMS_HHH	PF11798.3	gi|289596107|ref|YP_003482803.1|	-	0.022	14.7	0.0	0.092	12.8	0.0	2.1	2	0	0	2	2	1	0	IMS	family	HHH	motif
HHH_3	PF12836.2	gi|289596107|ref|YP_003482803.1|	-	0.032	14.1	0.0	2.7	7.9	0.0	2.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
ABC_tran	PF00005.22	gi|289596107|ref|YP_003482803.1|	-	0.05	13.8	0.0	2.6	8.3	0.0	2.3	1	1	1	2	2	2	0	ABC	transporter
Gp_dh_C	PF02800.15	gi|289596108|ref|YP_003482804.1|	-	9.8e-68	226.5	0.0	1.6e-67	225.8	0.0	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.19	gi|289596108|ref|YP_003482804.1|	-	3.4e-59	199.1	0.0	6.4e-59	198.2	0.0	1.5	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ADH_zinc_N	PF00107.21	gi|289596108|ref|YP_003482804.1|	-	0.0023	17.4	0.0	0.0055	16.2	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
FBPase_3	PF01950.11	gi|289596109|ref|YP_003482805.1|	-	2.3e-191	635.5	0.0	2.7e-191	635.3	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
FeoA	PF04023.9	gi|289596110|ref|YP_003482806.1|	-	3.8e-26	90.8	0.7	5.7e-17	61.4	0.1	2.0	2	0	0	2	2	2	2	FeoA	domain
FeoB_N	PF02421.13	gi|289596111|ref|YP_003482807.1|	-	3.6e-66	221.2	0.4	5.3e-66	220.7	0.3	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.9	gi|289596111|ref|YP_003482807.1|	-	5.8e-43	145.2	15.4	1.7e-25	89.0	3.8	2.9	2	1	0	2	2	2	2	Nucleoside	recognition
FeoB_C	PF07664.7	gi|289596111|ref|YP_003482807.1|	-	9.9e-19	66.5	2.9	9.9e-19	66.5	2.0	2.9	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B	C	terminus
MMR_HSR1	PF01926.18	gi|289596111|ref|YP_003482807.1|	-	1.7e-16	60.2	0.2	3.4e-16	59.2	0.1	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AIG1	PF04548.11	gi|289596111|ref|YP_003482807.1|	-	5.1e-05	22.4	0.0	8.3e-05	21.7	0.0	1.4	1	0	0	1	1	1	1	AIG1	family
GTP_EFTU	PF00009.22	gi|289596111|ref|YP_003482807.1|	-	6.2e-05	22.5	0.3	0.0015	18.0	0.2	2.5	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
SRPRB	PF09439.5	gi|289596111|ref|YP_003482807.1|	-	0.00058	19.1	0.0	0.0011	18.2	0.0	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
AAA_23	PF13476.1	gi|289596111|ref|YP_003482807.1|	-	0.00067	20.0	0.3	0.0011	19.3	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
Dynamin_N	PF00350.18	gi|289596111|ref|YP_003482807.1|	-	0.0011	18.8	0.1	0.57	9.9	0.0	2.3	2	0	0	2	2	2	2	Dynamin	family
Miro	PF08477.8	gi|289596111|ref|YP_003482807.1|	-	0.07	13.6	0.0	0.16	12.5	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
ABC_tran	PF00005.22	gi|289596111|ref|YP_003482807.1|	-	0.12	12.6	0.1	0.22	11.8	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
YrhK	PF14145.1	gi|289596112|ref|YP_003482808.1|	-	0.39	10.4	5.1	0.57	9.8	3.3	1.5	1	1	0	1	1	1	0	YrhK-like	protein
FeoC	PF09012.5	gi|289596113|ref|YP_003482809.1|	-	5.5e-09	35.6	0.0	6.6e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_45	PF14947.1	gi|289596113|ref|YP_003482809.1|	-	2.5e-06	27.1	0.8	1.3e-05	24.8	0.6	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|289596113|ref|YP_003482809.1|	-	2e-05	24.8	0.0	0.00065	19.9	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|289596113|ref|YP_003482809.1|	-	0.0016	18.3	0.6	0.003	17.4	0.1	1.8	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GerE	PF00196.14	gi|289596113|ref|YP_003482809.1|	-	0.0027	17.0	0.0	0.0039	16.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
MarR_2	PF12802.2	gi|289596113|ref|YP_003482809.1|	-	0.004	16.7	0.0	0.0048	16.5	0.0	1.1	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|289596113|ref|YP_003482809.1|	-	0.0043	16.7	0.0	0.0059	16.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|289596113|ref|YP_003482809.1|	-	0.0057	16.3	0.0	0.0073	15.9	0.0	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_38	PF13936.1	gi|289596113|ref|YP_003482809.1|	-	0.0069	15.9	0.1	0.012	15.1	0.1	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|289596113|ref|YP_003482809.1|	-	0.0069	16.3	0.2	0.39	10.7	0.0	2.1	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_40	PF14493.1	gi|289596113|ref|YP_003482809.1|	-	0.007	16.5	0.0	0.0076	16.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|289596113|ref|YP_003482809.1|	-	0.035	13.5	0.1	0.051	13.0	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_24	PF13412.1	gi|289596113|ref|YP_003482809.1|	-	0.064	12.6	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
RPA_C	PF08784.6	gi|289596113|ref|YP_003482809.1|	-	0.15	12.4	0.1	0.18	12.2	0.1	1.1	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Metallophos_2	PF12850.2	gi|289596114|ref|YP_003482810.1|	-	7e-30	103.9	0.0	8e-30	103.7	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|289596114|ref|YP_003482810.1|	-	3.2e-07	29.9	0.7	7.6e-05	22.1	0.5	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|289596114|ref|YP_003482810.1|	-	0.002	17.3	0.0	0.17	11.0	0.0	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
DUF835	PF05763.7	gi|289596116|ref|YP_003482812.1|	-	9e-29	99.7	2.8	2.1e-28	98.5	2.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
AAA_22	PF13401.1	gi|289596116|ref|YP_003482812.1|	-	0.0012	19.0	0.6	0.13	12.4	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|289596116|ref|YP_003482812.1|	-	0.046	12.8	0.2	0.076	12.1	0.1	1.3	1	0	0	1	1	1	0	KaiC
GvpD	PF07088.6	gi|289596117|ref|YP_003482813.1|	-	1.1e-30	106.4	0.0	1.6e-30	105.8	0.0	1.3	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
KaiC	PF06745.8	gi|289596117|ref|YP_003482813.1|	-	1.3e-12	47.3	0.0	2.6e-11	43.1	0.0	2.3	1	1	0	1	1	1	1	KaiC
DUF2075	PF09848.4	gi|289596117|ref|YP_003482813.1|	-	3.3e-05	23.0	0.0	4.9e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.1	gi|289596117|ref|YP_003482813.1|	-	4e-05	23.7	0.0	0.00025	21.1	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289596117|ref|YP_003482813.1|	-	0.00019	22.2	0.2	0.0017	19.1	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|289596117|ref|YP_003482813.1|	-	0.00059	19.5	0.0	0.0097	15.5	0.0	2.4	2	1	0	2	2	2	1	NACHT	domain
TIP49	PF06068.8	gi|289596117|ref|YP_003482813.1|	-	0.0012	17.6	0.1	0.0019	16.9	0.1	1.2	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_25	PF13481.1	gi|289596117|ref|YP_003482813.1|	-	0.0012	18.2	0.0	0.0029	17.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
Pox_A32	PF04665.7	gi|289596117|ref|YP_003482813.1|	-	0.0017	17.7	0.0	0.0039	16.5	0.0	1.6	1	1	0	1	1	1	1	Poxvirus	A32	protein
AAA_18	PF13238.1	gi|289596117|ref|YP_003482813.1|	-	0.002	18.4	0.1	0.0067	16.7	0.1	2.0	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|289596117|ref|YP_003482813.1|	-	0.0027	17.4	0.0	0.0052	16.5	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_5	PF07728.9	gi|289596117|ref|YP_003482813.1|	-	0.0046	16.6	0.0	0.0083	15.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|289596117|ref|YP_003482813.1|	-	0.006	16.5	0.0	0.01	15.8	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|289596117|ref|YP_003482813.1|	-	0.0067	15.6	0.0	0.011	14.9	0.0	1.2	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.24	gi|289596117|ref|YP_003482813.1|	-	0.0077	16.4	0.2	0.021	14.9	0.2	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KTI12	PF08433.5	gi|289596117|ref|YP_003482813.1|	-	0.0089	15.2	0.0	0.019	14.2	0.0	1.5	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|289596117|ref|YP_003482813.1|	-	0.011	15.4	0.2	0.03	14.0	0.0	1.8	2	0	0	2	2	2	0	NTPase
NB-ARC	PF00931.17	gi|289596117|ref|YP_003482813.1|	-	0.012	14.4	0.1	0.022	13.6	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_33	PF13671.1	gi|289596117|ref|YP_003482813.1|	-	0.028	14.3	0.0	0.091	12.6	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|289596117|ref|YP_003482813.1|	-	0.03	14.2	0.2	0.095	12.6	0.1	2.1	2	1	0	2	2	1	0	AAA	domain
AAA_11	PF13086.1	gi|289596117|ref|YP_003482813.1|	-	0.052	13.1	0.0	0.093	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|289596117|ref|YP_003482813.1|	-	0.065	13.4	0.0	0.15	12.2	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Zot	PF05707.7	gi|289596117|ref|YP_003482813.1|	-	0.11	11.9	0.0	0.25	10.7	0.0	1.6	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DEAD	PF00270.24	gi|289596117|ref|YP_003482813.1|	-	0.11	11.9	0.0	0.16	11.4	0.0	1.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
UPF0079	PF02367.12	gi|289596117|ref|YP_003482813.1|	-	0.12	12.0	0.2	0.35	10.4	0.0	1.8	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
Viral_helicase1	PF01443.13	gi|289596117|ref|YP_003482813.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
HTH_20	PF12840.2	gi|289596118|ref|YP_003482814.1|	-	2.7e-08	33.4	0.2	3.6e-08	33.0	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289596118|ref|YP_003482814.1|	-	0.00022	20.8	0.0	0.00033	20.2	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|289596118|ref|YP_003482814.1|	-	0.00029	20.1	0.0	0.00053	19.3	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|289596118|ref|YP_003482814.1|	-	0.0086	15.7	0.9	0.031	13.9	0.6	1.8	1	1	0	1	1	1	1	MarR	family
DUF2250	PF10007.4	gi|289596118|ref|YP_003482814.1|	-	0.012	15.4	0.0	0.019	14.8	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_CodY	PF08222.6	gi|289596118|ref|YP_003482814.1|	-	0.033	13.5	0.0	0.05	12.9	0.0	1.3	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_20	PF12840.2	gi|289596119|ref|YP_003482815.1|	-	1.1e-07	31.5	0.0	1.7e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596119|ref|YP_003482815.1|	-	0.00018	20.8	0.1	0.00039	19.7	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.9	gi|289596119|ref|YP_003482815.1|	-	0.00023	20.8	0.1	0.00039	20.1	0.1	1.4	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.14	gi|289596119|ref|YP_003482815.1|	-	0.0006	19.4	0.1	0.00094	18.8	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.14	gi|289596119|ref|YP_003482815.1|	-	0.00074	19.4	0.1	0.00091	19.1	0.0	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
DUF2250	PF10007.4	gi|289596119|ref|YP_003482815.1|	-	0.0017	18.2	1.0	0.0019	18.0	0.7	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_5	PF01022.15	gi|289596119|ref|YP_003482815.1|	-	0.0058	16.2	0.1	0.012	15.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|289596119|ref|YP_003482815.1|	-	0.013	15.2	0.4	0.025	14.3	0.3	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
RecO_N_2	PF13114.1	gi|289596119|ref|YP_003482815.1|	-	0.016	14.9	0.1	0.6	9.8	0.0	2.2	2	0	0	2	2	2	0	RecO	N	terminal
Rrf2	PF02082.15	gi|289596119|ref|YP_003482815.1|	-	0.024	14.7	0.1	0.031	14.3	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.7	gi|289596119|ref|YP_003482815.1|	-	0.041	13.5	0.0	0.076	12.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
HTH_34	PF13601.1	gi|289596119|ref|YP_003482815.1|	-	0.055	13.5	0.1	0.15	12.0	0.1	1.7	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HA2	PF04408.18	gi|289596119|ref|YP_003482815.1|	-	0.11	12.5	0.0	0.17	11.8	0.0	1.5	1	0	0	1	1	1	0	Helicase	associated	domain	(HA2)
PGK	PF00162.14	gi|289596120|ref|YP_003482816.1|	-	0.097	11.2	0.2	0.12	10.9	0.1	1.3	1	0	0	1	1	1	0	Phosphoglycerate	kinase
KaiC	PF06745.8	gi|289596121|ref|YP_003482817.1|	-	2.7e-49	167.3	0.1	3.2e-49	167.0	0.0	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.6	gi|289596121|ref|YP_003482817.1|	-	1.1e-08	33.9	0.3	4e-08	32.0	0.2	1.9	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.1	gi|289596121|ref|YP_003482817.1|	-	3.5e-06	26.5	0.0	8e-06	25.3	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289596121|ref|YP_003482817.1|	-	0.00012	22.0	0.1	0.00024	20.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|289596121|ref|YP_003482817.1|	-	0.00018	20.6	0.2	0.00025	20.1	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
DnaB_C	PF03796.10	gi|289596121|ref|YP_003482817.1|	-	0.00034	19.5	0.0	0.00049	19.0	0.0	1.2	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_17	PF13207.1	gi|289596121|ref|YP_003482817.1|	-	0.0012	19.6	0.8	0.0021	18.8	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|289596121|ref|YP_003482817.1|	-	0.0017	18.5	0.0	0.0028	17.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|289596121|ref|YP_003482817.1|	-	0.0029	17.7	0.1	0.0058	16.7	0.0	1.5	1	1	0	1	1	1	1	RNA	helicase
NACHT	PF05729.7	gi|289596121|ref|YP_003482817.1|	-	0.0037	16.9	0.1	0.0067	16.1	0.1	1.4	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|289596121|ref|YP_003482817.1|	-	0.0065	16.2	0.0	0.008	15.8	0.0	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|289596121|ref|YP_003482817.1|	-	0.0068	16.7	0.8	0.014	15.7	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|289596121|ref|YP_003482817.1|	-	0.0091	14.9	0.1	0.014	14.3	0.1	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF2075	PF09848.4	gi|289596121|ref|YP_003482817.1|	-	0.015	14.2	0.0	0.02	13.8	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
CobU	PF02283.11	gi|289596121|ref|YP_003482817.1|	-	0.024	14.0	0.0	0.047	13.0	0.0	1.5	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_29	PF13555.1	gi|289596121|ref|YP_003482817.1|	-	0.026	14.0	0.2	0.067	12.7	0.1	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|289596121|ref|YP_003482817.1|	-	0.033	13.6	0.1	0.22	10.9	0.1	2.0	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
Rad51	PF08423.6	gi|289596121|ref|YP_003482817.1|	-	0.04	12.8	0.0	0.053	12.4	0.0	1.3	1	0	0	1	1	1	0	Rad51
TrwB_AAD_bind	PF10412.4	gi|289596121|ref|YP_003482817.1|	-	0.042	12.4	0.1	0.063	11.9	0.1	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
IstB_IS21	PF01695.12	gi|289596121|ref|YP_003482817.1|	-	0.058	12.8	0.1	0.19	11.1	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
UPF0079	PF02367.12	gi|289596121|ref|YP_003482817.1|	-	0.066	12.8	0.1	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|289596121|ref|YP_003482817.1|	-	0.086	12.8	0.0	0.1	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|289596121|ref|YP_003482817.1|	-	0.11	11.3	0.1	0.16	10.7	0.1	1.2	1	0	0	1	1	1	0	NB-ARC	domain
AAA_19	PF13245.1	gi|289596121|ref|YP_003482817.1|	-	0.11	12.3	0.0	0.23	11.2	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|289596121|ref|YP_003482817.1|	-	0.12	12.2	0.1	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289596121|ref|YP_003482817.1|	-	0.13	11.6	0.0	0.15	11.4	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
SAICAR_synt	PF01259.13	gi|289596122|ref|YP_003482818.1|	-	2e-38	131.9	0.1	2.6e-38	131.5	0.1	1.1	1	0	0	1	1	1	1	SAICAR	synthetase
XhlA	PF10779.4	gi|289596123|ref|YP_003482819.1|	-	0.0024	17.7	0.2	0.0024	17.7	0.1	1.1	1	0	0	1	1	1	1	Haemolysin	XhlA
FlaC_arch	PF05377.6	gi|289596123|ref|YP_003482819.1|	-	0.0083	15.9	0.1	0.011	15.6	0.1	1.2	1	0	0	1	1	1	1	Flagella	accessory	protein	C	(FlaC)
Hormone_3	PF00159.13	gi|289596123|ref|YP_003482819.1|	-	0.017	15.0	0.4	0.025	14.5	0.3	1.2	1	0	0	1	1	1	0	Pancreatic	hormone	peptide
AIP3	PF03915.8	gi|289596123|ref|YP_003482819.1|	-	0.022	13.7	0.4	0.023	13.6	0.3	1.0	1	0	0	1	1	1	0	Actin	interacting	protein	3
Vac_Fusion	PF02346.11	gi|289596123|ref|YP_003482819.1|	-	0.028	13.8	0.1	0.035	13.5	0.1	1.1	1	0	0	1	1	1	0	Chordopoxvirus	fusion	protein
Fib_alpha	PF08702.5	gi|289596123|ref|YP_003482819.1|	-	0.03	14.4	0.3	0.034	14.2	0.2	1.0	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Lzipper-MIP1	PF14389.1	gi|289596123|ref|YP_003482819.1|	-	0.031	14.3	0.2	1.8	8.7	0.0	2.0	1	1	1	2	2	2	0	Leucine-zipper	of	ternary	complex	factor	MIP1
Prefoldin	PF02996.12	gi|289596123|ref|YP_003482819.1|	-	0.033	13.8	0.2	0.04	13.5	0.2	1.0	1	0	0	1	1	1	0	Prefoldin	subunit
TSC22	PF01166.13	gi|289596123|ref|YP_003482819.1|	-	0.033	14.1	0.2	0.041	13.8	0.1	1.2	1	0	0	1	1	1	0	TSC-22/dip/bun	family
DUF2360	PF10152.4	gi|289596123|ref|YP_003482819.1|	-	0.039	14.2	0.1	0.041	14.1	0.0	1.1	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
BLOC1_2	PF10046.4	gi|289596123|ref|YP_003482819.1|	-	0.062	13.4	0.2	0.068	13.3	0.1	1.1	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Prefoldin_2	PF01920.15	gi|289596123|ref|YP_003482819.1|	-	0.067	12.9	0.2	0.08	12.7	0.1	1.1	1	0	0	1	1	1	0	Prefoldin	subunit
Bcr-Abl_Oligo	PF09036.5	gi|289596123|ref|YP_003482819.1|	-	0.069	13.1	0.1	0.072	13.0	0.1	1.1	1	0	0	1	1	1	0	Bcr-Abl	oncoprotein	oligomerisation	domain
DUF4618	PF15397.1	gi|289596123|ref|YP_003482819.1|	-	0.072	12.4	0.2	0.08	12.2	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4618)
Jnk-SapK_ap_N	PF09744.4	gi|289596123|ref|YP_003482819.1|	-	0.082	12.9	0.5	0.084	12.8	0.3	1.1	1	0	0	1	1	1	0	JNK_SAPK-associated	protein-1
MAD	PF05557.8	gi|289596123|ref|YP_003482819.1|	-	0.098	10.7	0.2	0.093	10.8	0.2	1.0	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
Pox_A_type_inc	PF04508.7	gi|289596123|ref|YP_003482819.1|	-	0.11	12.3	2.3	2.8	7.9	1.2	2.4	2	0	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
TelA	PF05816.6	gi|289596123|ref|YP_003482819.1|	-	0.13	10.9	0.8	0.14	10.8	0.6	1.0	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
ATG16	PF08614.6	gi|289596123|ref|YP_003482819.1|	-	0.16	11.7	0.5	0.15	11.8	0.3	1.0	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
DUF4064	PF13273.1	gi|289596124|ref|YP_003482820.1|	-	1.4e-05	25.0	14.8	1.4e-05	25.0	10.2	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4064)
5TM-5TMR_LYT	PF07694.7	gi|289596124|ref|YP_003482820.1|	-	0.016	14.5	14.9	0.022	14.0	10.3	1.2	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
DUF998	PF06197.8	gi|289596124|ref|YP_003482820.1|	-	0.017	14.4	12.4	0.021	14.1	8.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Oxidored_q3	PF00499.15	gi|289596124|ref|YP_003482820.1|	-	0.094	12.4	13.7	0.11	12.2	9.5	1.1	1	0	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
PEMT	PF04191.8	gi|289596124|ref|YP_003482820.1|	-	0.1	12.7	0.2	0.1	12.7	0.1	2.6	1	1	2	3	3	3	0	Phospholipid	methyltransferase
Frag1	PF10277.4	gi|289596124|ref|YP_003482820.1|	-	0.17	11.3	8.9	0.3	10.5	6.2	1.4	1	1	0	1	1	1	0	Frag1/DRAM/Sfk1	family
NfeD	PF01957.13	gi|289596124|ref|YP_003482820.1|	-	0.48	10.5	16.5	0.025	14.7	3.9	2.1	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
DUF308	PF03729.8	gi|289596124|ref|YP_003482820.1|	-	0.54	10.2	29.8	0.069	13.1	8.6	3.4	1	1	2	3	3	3	0	Short	repeat	of	unknown	function	(DUF308)
Tetraspannin	PF00335.15	gi|289596124|ref|YP_003482820.1|	-	1	8.5	17.5	1.3	8.2	12.2	1.1	1	0	0	1	1	1	0	Tetraspanin	family
Rhomboid	PF01694.17	gi|289596124|ref|YP_003482820.1|	-	1.2	9.1	11.9	2.1	8.3	8.2	1.4	1	1	0	1	1	1	0	Rhomboid	family
DUF373	PF04123.8	gi|289596124|ref|YP_003482820.1|	-	1.4	7.9	6.9	1.8	7.5	4.8	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DUF204	PF02659.10	gi|289596124|ref|YP_003482820.1|	-	2.1	8.5	23.1	11	6.2	2.4	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	DUF
PMP22_Claudin	PF00822.15	gi|289596124|ref|YP_003482820.1|	-	2.3	7.8	14.1	0.1	12.2	2.9	2.5	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	family
DUF92	PF01940.11	gi|289596124|ref|YP_003482820.1|	-	2.9	7.0	12.6	7.5	5.6	5.3	2.0	1	1	1	2	2	2	0	Integral	membrane	protein	DUF92
SUR7	PF06687.7	gi|289596124|ref|YP_003482820.1|	-	3.5	7.1	16.3	36	3.8	11.3	1.9	1	1	0	1	1	1	0	SUR7/PalI	family
DUF2678	PF10856.3	gi|289596124|ref|YP_003482820.1|	-	3.8	7.2	7.9	5.4	6.7	4.6	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2678)
ABC2_membrane_3	PF12698.2	gi|289596124|ref|YP_003482820.1|	-	5.4	5.9	18.3	7.2	5.5	12.7	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF973	PF06157.6	gi|289596124|ref|YP_003482820.1|	-	7.3	5.4	21.3	14	4.5	14.7	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
PrsW-protease	PF13367.1	gi|289596125|ref|YP_003482821.1|	-	3.5e-35	120.9	13.4	4.8e-35	120.4	9.3	1.2	1	0	0	1	1	1	1	Protease	prsW	family
DUF2324	PF10086.4	gi|289596125|ref|YP_003482821.1|	-	1.5e-05	24.3	3.9	2.3e-05	23.7	2.4	1.5	1	1	0	1	1	1	1	Putative	membrane	peptidase	family	(DUF2324)
Eno-Rase_NADH_b	PF12242.3	gi|289596125|ref|YP_003482821.1|	-	0.13	12.0	0.5	0.26	11.0	0.0	1.7	2	0	0	2	2	2	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DUF1097	PF06496.6	gi|289596125|ref|YP_003482821.1|	-	0.32	10.7	7.6	2.9	7.7	0.0	3.2	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF1097)
Pcc1	PF09341.5	gi|289596126|ref|YP_003482822.1|	-	3.2e-06	27.0	0.1	6.2e-06	26.1	0.0	1.5	1	1	0	1	1	1	1	Transcription	factor	Pcc1
PDDEXK_3	PF13366.1	gi|289596126|ref|YP_003482822.1|	-	0.043	13.8	0.0	0.069	13.2	0.0	1.3	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
HD	PF01966.17	gi|289596127|ref|YP_003482823.1|	-	1.3e-13	51.0	0.8	2.5e-13	50.0	0.6	1.5	1	0	0	1	1	1	1	HD	domain
tRNA_anti-codon	PF01336.20	gi|289596127|ref|YP_003482823.1|	-	4.8e-05	23.1	0.4	9.9e-05	22.1	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
HDOD	PF08668.7	gi|289596127|ref|YP_003482823.1|	-	0.0032	16.7	0.0	0.0074	15.5	0.0	1.5	1	0	0	1	1	1	1	HDOD	domain
Pox_polyA_pol_N	PF12630.2	gi|289596127|ref|YP_003482823.1|	-	0.39	10.8	2.9	0.56	10.3	0.9	1.9	2	0	0	2	2	2	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
DUF998	PF06197.8	gi|289596128|ref|YP_003482824.1|	-	1.7	7.8	10.9	98	2.1	7.6	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Peptidase_M24	PF00557.19	gi|289596129|ref|YP_003482825.1|	-	2.2e-63	213.5	0.8	3e-63	213.1	0.6	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|289596129|ref|YP_003482825.1|	-	5.1e-11	43.1	0.0	1e-10	42.2	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
DUF998	PF06197.8	gi|289596130|ref|YP_003482826.1|	-	2.5e-20	72.5	25.2	2.9e-20	72.3	17.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Fig1	PF12351.3	gi|289596130|ref|YP_003482826.1|	-	2	8.2	10.5	5.4	6.8	7.1	1.9	1	1	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
YfhO	PF09586.5	gi|289596130|ref|YP_003482826.1|	-	4.8	5.0	16.3	5.4	4.9	11.3	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
UPF0029	PF01205.14	gi|289596131|ref|YP_003482827.1|	-	2e-29	101.4	0.3	2.3e-29	101.2	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0029
Endonuclease_5	PF04493.9	gi|289596132|ref|YP_003482828.1|	-	2.9e-47	160.7	0.7	5e-47	159.9	0.1	1.6	2	0	0	2	2	2	1	Endonuclease	V
DNA_binding_1	PF01035.15	gi|289596132|ref|YP_003482828.1|	-	1.9e-24	85.2	0.0	4.5e-24	84.0	0.0	1.7	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
DUF99	PF01949.11	gi|289596132|ref|YP_003482828.1|	-	0.0085	15.2	0.0	0.016	14.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Thymidylate_kin	PF02223.12	gi|289596133|ref|YP_003482829.1|	-	8.5e-44	149.1	0.0	9.9e-44	148.9	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|289596133|ref|YP_003482829.1|	-	6.2e-10	39.2	0.0	7.4e-10	39.0	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289596133|ref|YP_003482829.1|	-	5.5e-08	33.6	1.0	1e-06	29.5	0.7	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|289596133|ref|YP_003482829.1|	-	6.8e-07	29.6	0.5	3.1e-06	27.4	0.0	2.0	1	1	0	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|289596133|ref|YP_003482829.1|	-	8.7e-06	25.1	0.0	1.5e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.1	gi|289596133|ref|YP_003482829.1|	-	2.5e-05	24.1	0.0	3.9e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|289596133|ref|YP_003482829.1|	-	0.0021	17.7	0.1	0.048	13.3	0.0	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
APS_kinase	PF01583.15	gi|289596133|ref|YP_003482829.1|	-	0.0021	17.7	0.0	0.0065	16.1	0.0	1.9	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_22	PF13401.1	gi|289596133|ref|YP_003482829.1|	-	0.015	15.4	0.2	0.073	13.2	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
SKI	PF01202.17	gi|289596133|ref|YP_003482829.1|	-	0.017	14.9	0.4	0.084	12.7	0.1	2.2	2	1	0	2	2	2	0	Shikimate	kinase
AAA_14	PF13173.1	gi|289596133|ref|YP_003482829.1|	-	0.023	14.6	0.8	0.18	11.6	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|289596133|ref|YP_003482829.1|	-	0.026	14.7	0.0	0.051	13.7	0.0	1.6	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|289596133|ref|YP_003482829.1|	-	0.03	13.4	0.0	0.32	10.1	0.0	2.0	1	1	1	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
PRK	PF00485.13	gi|289596133|ref|YP_003482829.1|	-	0.039	13.5	0.0	0.043	13.3	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
ABC_tran	PF00005.22	gi|289596133|ref|YP_003482829.1|	-	0.039	14.2	0.0	0.051	13.8	0.0	1.4	1	1	0	1	1	1	0	ABC	transporter
CbiA	PF01656.18	gi|289596133|ref|YP_003482829.1|	-	0.044	13.1	0.0	0.072	12.4	0.0	1.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_25	PF13481.1	gi|289596133|ref|YP_003482829.1|	-	0.049	13.0	0.1	0.28	10.5	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
PPK2	PF03976.9	gi|289596133|ref|YP_003482829.1|	-	0.057	12.7	0.1	0.12	11.6	0.0	1.7	2	1	0	2	2	2	0	Polyphosphate	kinase	2	(PPK2)
T2SE	PF00437.15	gi|289596133|ref|YP_003482829.1|	-	0.067	12.0	0.0	3.6	6.4	0.0	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.17	gi|289596133|ref|YP_003482829.1|	-	0.08	13.1	0.0	0.15	12.2	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
NB-ARC	PF00931.17	gi|289596133|ref|YP_003482829.1|	-	0.085	11.6	0.0	0.12	11.2	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
CPT	PF07931.7	gi|289596133|ref|YP_003482829.1|	-	0.089	12.4	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_10	PF12846.2	gi|289596133|ref|YP_003482829.1|	-	0.094	12.1	0.0	0.23	10.8	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
MMR_HSR1	PF01926.18	gi|289596133|ref|YP_003482829.1|	-	0.14	12.1	0.1	2.7	7.9	0.0	2.3	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
Methyltransf_6	PF03737.10	gi|289596134|ref|YP_003482830.1|	-	1e-36	126.1	2.2	1e-36	126.1	1.6	2.0	2	0	0	2	2	2	1	Demethylmenaquinone	methyltransferase
OMPdecase	PF00215.19	gi|289596134|ref|YP_003482830.1|	-	7.7e-31	107.2	3.9	7.7e-31	107.2	2.7	1.9	2	0	0	2	2	2	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
His_biosynth	PF00977.16	gi|289596134|ref|YP_003482830.1|	-	3.6e-09	36.2	4.5	2.3e-08	33.5	0.5	2.3	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
TMP-TENI	PF02581.12	gi|289596134|ref|YP_003482830.1|	-	9.3e-08	31.3	2.8	4.1e-07	29.3	2.0	2.2	1	1	0	1	1	1	1	Thiamine	monophosphate	synthase/TENI
PcrB	PF01884.12	gi|289596134|ref|YP_003482830.1|	-	5.7e-07	29.0	4.8	2.4e-06	26.9	1.5	2.7	2	1	0	2	2	2	1	PcrB	family
HMGL-like	PF00682.14	gi|289596134|ref|YP_003482830.1|	-	2.7e-06	27.2	2.1	4.4e-06	26.5	0.4	1.9	1	1	1	2	2	2	1	HMGL-like
Dus	PF01207.12	gi|289596134|ref|YP_003482830.1|	-	1.5e-05	24.0	0.2	2.4e-05	23.3	0.1	1.3	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
Trp_syntA	PF00290.15	gi|289596134|ref|YP_003482830.1|	-	1.6e-05	23.6	3.9	0.00034	19.2	1.2	2.5	2	1	0	2	2	2	1	Tryptophan	synthase	alpha	chain
NanE	PF04131.9	gi|289596134|ref|YP_003482830.1|	-	2.6e-05	23.3	1.5	7.5e-05	21.7	0.8	2.0	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IGPS	PF00218.16	gi|289596134|ref|YP_003482830.1|	-	4.8e-05	22.5	0.7	8e-05	21.8	0.5	1.3	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
NMO	PF03060.10	gi|289596134|ref|YP_003482830.1|	-	0.0001	21.6	5.8	0.00028	20.1	3.5	1.9	1	1	1	2	2	2	1	Nitronate	monooxygenase
ThiG	PF05690.9	gi|289596134|ref|YP_003482830.1|	-	0.00011	21.4	1.7	0.00018	20.6	1.2	1.4	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
PEP_mutase	PF13714.1	gi|289596134|ref|YP_003482830.1|	-	0.0002	20.6	1.6	0.014	14.6	0.2	2.7	1	1	1	2	2	2	1	Phosphoenolpyruvate	phosphomutase
Ribul_P_3_epim	PF00834.14	gi|289596134|ref|YP_003482830.1|	-	0.00028	20.0	1.9	0.00099	18.2	1.3	2.2	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
ADH_zinc_N	PF00107.21	gi|289596134|ref|YP_003482830.1|	-	0.00066	19.2	2.3	0.0056	16.2	0.3	2.8	1	1	2	3	3	3	1	Zinc-binding	dehydrogenase
FMN_dh	PF01070.13	gi|289596134|ref|YP_003482830.1|	-	0.00083	18.3	4.6	0.0031	16.4	3.2	1.6	1	1	0	1	1	1	1	FMN-dependent	dehydrogenase
Pterin_bind	PF00809.17	gi|289596134|ref|YP_003482830.1|	-	0.004	16.5	1.6	0.004	16.5	1.1	2.7	1	1	1	2	2	2	1	Pterin	binding	enzyme
Oxidored_FMN	PF00724.15	gi|289596134|ref|YP_003482830.1|	-	0.0048	15.9	0.2	0.016	14.2	0.1	1.9	1	1	1	2	2	2	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Glycos_transf_1	PF00534.15	gi|289596134|ref|YP_003482830.1|	-	0.025	13.9	0.9	0.1	12.0	0.2	2.1	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
QRPTase_C	PF01729.14	gi|289596134|ref|YP_003482830.1|	-	0.045	13.2	3.9	0.22	11.0	1.8	2.6	1	1	2	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF561	PF04481.7	gi|289596134|ref|YP_003482830.1|	-	0.067	12.1	6.2	0.13	11.2	0.6	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
Peripla_BP_4	PF13407.1	gi|289596134|ref|YP_003482830.1|	-	0.14	11.4	8.0	0.031	13.6	1.7	2.2	2	1	0	2	2	2	0	Periplasmic	binding	protein	domain
Rubrerythrin	PF02915.12	gi|289596135|ref|YP_003482831.1|	-	2.7e-19	69.8	5.1	3.1e-19	69.6	3.2	1.4	1	1	0	1	1	1	1	Rubrerythrin
DUF2383	PF09537.5	gi|289596135|ref|YP_003482831.1|	-	4.1e-08	33.4	1.7	0.0028	17.8	0.3	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2383)
Ferritin_2	PF13668.1	gi|289596135|ref|YP_003482831.1|	-	7.7e-07	29.1	1.6	0.0015	18.4	0.2	2.1	1	1	1	2	2	2	2	Ferritin-like	domain
DUF892	PF05974.7	gi|289596135|ref|YP_003482831.1|	-	0.0083	15.9	0.3	0.24	11.1	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF892)
DUF3231	PF11553.3	gi|289596135|ref|YP_003482831.1|	-	0.03	13.8	0.3	0.25	10.8	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3231)
T4_Gp59_C	PF08994.5	gi|289596135|ref|YP_003482831.1|	-	0.044	13.9	0.6	0.11	12.6	0.4	1.6	1	0	0	1	1	1	0	T4	gene	Gp59	loader	of	gp41	DNA	helicase	C-term
NTS	PF15447.1	gi|289596135|ref|YP_003482831.1|	-	0.049	14.0	2.8	5.2	7.5	0.1	2.4	2	0	0	2	2	2	0	N-terminal	segments	of	PfEMP1
Tctex-1	PF03645.8	gi|289596135|ref|YP_003482831.1|	-	0.082	12.7	1.0	0.16	11.8	0.7	1.6	1	0	0	1	1	1	0	Tctex-1	family
DUF1847	PF08901.6	gi|289596135|ref|YP_003482831.1|	-	0.86	9.0	3.8	0.53	9.7	1.4	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1847)
YkyA	PF10368.4	gi|289596135|ref|YP_003482831.1|	-	3.3	7.0	11.9	0.38	10.0	4.0	1.9	2	0	0	2	2	2	0	Putative	cell-wall	binding	lipoprotein
Trp_Tyr_perm	PF03222.8	gi|289596136|ref|YP_003482832.1|	-	6.8e-29	100.8	44.1	1.5e-28	99.7	30.6	1.4	1	1	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.13	gi|289596136|ref|YP_003482832.1|	-	2.9e-15	55.6	46.3	2.8e-14	52.4	32.1	2.2	1	1	0	1	1	1	1	Transmembrane	amino	acid	transporter	protein
Spore_permease	PF03845.8	gi|289596136|ref|YP_003482832.1|	-	7.4e-06	24.8	31.7	7.4e-06	24.8	22.0	2.0	1	1	0	2	2	2	1	Spore	germination	protein
AA_permease	PF00324.16	gi|289596136|ref|YP_003482832.1|	-	8.8	4.5	54.5	1.1	7.5	24.1	2.1	1	1	1	2	2	2	0	Amino	acid	permease
AsnC_trans_reg	PF01037.16	gi|289596137|ref|YP_003482833.1|	-	2.4e-15	55.9	0.0	2.7e-15	55.8	0.0	1.0	1	0	0	1	1	1	1	AsnC	family
DUF2672	PF10878.3	gi|289596137|ref|YP_003482833.1|	-	0.023	14.4	2.1	0.033	13.9	1.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2672)
NapD	PF03927.8	gi|289596137|ref|YP_003482833.1|	-	0.03	14.1	0.2	0.041	13.7	0.1	1.2	1	0	0	1	1	1	0	NapD	protein
DUF3839	PF12943.2	gi|289596137|ref|YP_003482833.1|	-	0.057	12.5	0.3	0.065	12.3	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3839)
PHP	PF02811.14	gi|289596138|ref|YP_003482834.1|	-	8.4e-15	54.9	0.1	1.1e-14	54.6	0.1	1.2	1	0	0	1	1	1	1	PHP	domain
adh_short_C2	PF13561.1	gi|289596139|ref|YP_003482835.1|	-	4.9e-29	101.7	0.0	6e-29	101.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|289596139|ref|YP_003482835.1|	-	2.9e-21	76.1	0.0	3.9e-21	75.6	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|289596139|ref|YP_003482835.1|	-	4.4e-09	36.2	0.0	7.5e-09	35.5	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Polysacc_synt_2	PF02719.10	gi|289596139|ref|YP_003482835.1|	-	2.1e-05	23.6	0.1	3.1e-05	23.0	0.1	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|289596139|ref|YP_003482835.1|	-	2.5e-05	24.3	0.0	0.00039	20.4	0.0	2.1	1	1	0	1	1	1	1	NADH(P)-binding
3HCDH_N	PF02737.13	gi|289596139|ref|YP_003482835.1|	-	9.8e-05	22.0	0.8	0.00016	21.4	0.2	1.5	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|289596139|ref|YP_003482835.1|	-	0.0013	19.1	0.4	0.01	16.2	0.1	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
DFP	PF04127.10	gi|289596139|ref|YP_003482835.1|	-	0.002	17.8	0.1	0.0034	17.0	0.0	1.3	1	0	0	1	1	1	1	DNA	/	pantothenate	metabolism	flavoprotein
TrkA_N	PF02254.13	gi|289596139|ref|YP_003482835.1|	-	0.0081	16.1	0.2	0.015	15.2	0.2	1.5	1	0	0	1	1	1	1	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.18	gi|289596139|ref|YP_003482835.1|	-	0.014	15.1	0.0	0.03	14.0	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|289596139|ref|YP_003482835.1|	-	0.02	14.7	0.5	0.045	13.5	0.1	1.7	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Epimerase	PF01370.16	gi|289596139|ref|YP_003482835.1|	-	0.021	14.2	0.0	0.032	13.6	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
NAD_binding_7	PF13241.1	gi|289596139|ref|YP_003482835.1|	-	0.043	14.0	0.2	0.083	13.1	0.1	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|289596139|ref|YP_003482835.1|	-	0.059	13.1	0.0	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
NmrA	PF05368.8	gi|289596139|ref|YP_003482835.1|	-	0.072	12.3	0.2	0.11	11.6	0.1	1.2	1	0	0	1	1	1	0	NmrA-like	family
THF_DHG_CYH_C	PF02882.14	gi|289596139|ref|YP_003482835.1|	-	0.085	11.9	0.3	0.17	10.9	0.1	1.6	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Shikimate_DH	PF01488.15	gi|289596139|ref|YP_003482835.1|	-	0.11	12.6	0.4	0.22	11.6	0.2	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
MFS_1	PF07690.11	gi|289596140|ref|YP_003482836.1|	-	3e-25	88.6	56.9	5.4e-17	61.5	25.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|289596140|ref|YP_003482836.1|	-	2.1e-08	33.1	44.8	3.3e-08	32.5	6.0	3.5	2	2	1	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|289596140|ref|YP_003482836.1|	-	0.54	8.3	29.1	7.8	4.4	15.3	3.4	1	1	0	2	2	2	0	Transmembrane	secretion	effector
Aminotran_3	PF00202.16	gi|289596141|ref|YP_003482837.1|	-	1.9e-74	250.5	0.0	2.2e-74	250.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
tRNA-synt_2	PF00152.15	gi|289596142|ref|YP_003482838.1|	-	8.5e-97	323.9	1.3	1.1e-96	323.5	0.9	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|289596142|ref|YP_003482838.1|	-	5.9e-15	54.8	0.6	1.2e-14	53.9	0.4	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|289596142|ref|YP_003482838.1|	-	2.3e-06	26.9	0.6	0.00094	18.4	0.0	2.9	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
KaiC	PF06745.8	gi|289596143|ref|YP_003482839.1|	-	1.2e-62	211.0	3.6	6.1e-31	107.3	0.0	3.0	2	1	0	2	2	2	2	KaiC
AAA_25	PF13481.1	gi|289596143|ref|YP_003482839.1|	-	5e-16	58.6	0.0	3.6e-08	33.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
GvpD	PF07088.6	gi|289596143|ref|YP_003482839.1|	-	2.9e-11	42.3	0.0	1.5e-07	30.1	0.0	2.2	2	0	0	2	2	2	2	GvpD	gas	vesicle	protein
IstB_IS21	PF01695.12	gi|289596143|ref|YP_003482839.1|	-	7.8e-11	41.7	0.2	0.00092	18.6	0.0	3.3	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|289596143|ref|YP_003482839.1|	-	3.9e-10	39.3	0.0	5.6e-05	22.8	0.0	2.5	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_14	PF13173.1	gi|289596143|ref|YP_003482839.1|	-	2.4e-08	33.9	0.2	0.0004	20.2	0.1	2.6	2	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|289596143|ref|YP_003482839.1|	-	1.4e-07	31.7	0.0	0.0034	17.5	0.0	2.6	2	2	0	2	2	2	2	AAA	domain
DnaB_C	PF03796.10	gi|289596143|ref|YP_003482839.1|	-	1.8e-07	30.3	0.0	0.012	14.5	0.0	2.8	3	0	0	3	3	3	2	DnaB-like	helicase	C	terminal	domain
Zot	PF05707.7	gi|289596143|ref|YP_003482839.1|	-	7.5e-07	28.7	0.0	0.031	13.7	0.0	2.5	2	1	0	2	2	2	2	Zonular	occludens	toxin	(Zot)
DUF2075	PF09848.4	gi|289596143|ref|YP_003482839.1|	-	9.2e-07	28.1	0.0	0.0072	15.3	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.24	gi|289596143|ref|YP_003482839.1|	-	2.3e-06	27.8	0.2	0.0011	19.1	0.1	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|289596143|ref|YP_003482839.1|	-	2.9e-06	27.0	0.0	0.00017	21.3	0.0	2.3	2	0	0	2	2	2	1	NACHT	domain
AAA_18	PF13238.1	gi|289596143|ref|YP_003482839.1|	-	3.9e-05	23.9	0.1	0.0026	18.0	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.10	gi|289596143|ref|YP_003482839.1|	-	7.1e-05	22.7	0.1	0.051	13.3	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|289596143|ref|YP_003482839.1|	-	0.00011	21.5	0.1	0.022	14.0	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
AAA_35	PF14516.1	gi|289596143|ref|YP_003482839.1|	-	0.00011	20.9	0.0	0.049	12.2	0.0	2.3	2	0	0	2	2	2	2	AAA-like	domain
Sigma54_activat	PF00158.21	gi|289596143|ref|YP_003482839.1|	-	0.00024	20.6	0.0	0.11	11.9	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_11	PF13086.1	gi|289596143|ref|YP_003482839.1|	-	0.00029	20.4	0.0	0.028	14.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|289596143|ref|YP_003482839.1|	-	0.0004	20.1	1.1	0.044	13.4	0.4	2.4	2	1	0	2	2	2	1	Archaeal	ATPase
AAA_5	PF07728.9	gi|289596143|ref|YP_003482839.1|	-	0.00055	19.6	0.2	0.08	12.6	0.1	3.0	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|289596143|ref|YP_003482839.1|	-	0.0019	18.2	0.0	0.022	14.7	0.0	2.2	2	0	0	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|289596143|ref|YP_003482839.1|	-	0.0021	18.2	0.0	0.095	12.8	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
DEAD	PF00270.24	gi|289596143|ref|YP_003482839.1|	-	0.0036	16.8	0.0	1.9	7.9	0.0	2.8	2	1	1	3	3	3	1	DEAD/DEAH	box	helicase
T2SE	PF00437.15	gi|289596143|ref|YP_003482839.1|	-	0.0045	15.9	0.0	0.1	11.4	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|289596143|ref|YP_003482839.1|	-	0.0051	16.3	0.2	0.94	9.0	0.0	2.5	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|289596143|ref|YP_003482839.1|	-	0.0052	16.3	0.0	0.7	9.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|289596143|ref|YP_003482839.1|	-	0.006	17.4	0.5	1.3	9.9	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_31	PF13614.1	gi|289596143|ref|YP_003482839.1|	-	0.0098	15.8	0.0	0.34	10.8	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|289596143|ref|YP_003482839.1|	-	0.0099	14.5	0.0	0.75	8.3	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_10	PF12846.2	gi|289596143|ref|YP_003482839.1|	-	0.011	15.2	0.0	1.9	7.8	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
Mg_chelatase	PF01078.16	gi|289596143|ref|YP_003482839.1|	-	0.018	14.2	0.0	0.44	9.6	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
RecA	PF00154.16	gi|289596143|ref|YP_003482839.1|	-	0.025	13.6	0.0	0.91	8.5	0.0	2.5	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
ABC_tran	PF00005.22	gi|289596143|ref|YP_003482839.1|	-	0.04	14.2	0.0	0.69	10.2	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
AAA_33	PF13671.1	gi|289596143|ref|YP_003482839.1|	-	0.056	13.3	0.0	3.7	7.4	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|289596143|ref|YP_003482839.1|	-	0.063	12.9	0.1	2.3	7.9	0.0	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|289596143|ref|YP_003482839.1|	-	0.08	12.3	0.1	1.6	8.1	0.0	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|289596143|ref|YP_003482839.1|	-	0.088	12.4	2.3	3	7.5	0.0	3.0	3	0	0	3	3	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
Sigma54_activ_2	PF14532.1	gi|289596143|ref|YP_003482839.1|	-	0.11	12.5	0.0	1.4	8.9	0.0	2.5	3	0	0	3	3	2	0	Sigma-54	interaction	domain
RuvB_N	PF05496.7	gi|289596143|ref|YP_003482839.1|	-	0.11	11.5	0.2	0.51	9.3	0.0	2.2	2	1	1	3	3	3	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_23	PF13476.1	gi|289596143|ref|YP_003482839.1|	-	0.12	12.6	3.4	25	5.1	0.0	3.1	2	1	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|289596143|ref|YP_003482839.1|	-	0.15	11.1	0.0	2	7.4	0.0	2.3	2	0	0	2	2	2	0	Zeta	toxin
ATP-synt_ab	PF00006.20	gi|289596143|ref|YP_003482839.1|	-	0.16	11.4	0.0	2.7	7.4	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF1542	PF07564.6	gi|289596143|ref|YP_003482839.1|	-	0.19	11.7	0.1	0.4	10.7	0.1	1.4	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1542)
DUF2267	PF10025.4	gi|289596144|ref|YP_003482840.1|	-	0.0022	18.0	0.6	0.0036	17.3	0.4	1.3	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2267)
AF0941-like	PF14591.1	gi|289596144|ref|YP_003482840.1|	-	0.0076	16.3	2.2	0.013	15.5	1.5	1.4	1	0	0	1	1	1	1	AF0941-like
Imm16	PF15565.1	gi|289596144|ref|YP_003482840.1|	-	0.0077	16.0	0.2	0.011	15.6	0.1	1.3	1	0	0	1	1	1	1	Immunity	protein	16
SDH_sah	PF01972.11	gi|289596144|ref|YP_003482840.1|	-	0.012	14.3	0.6	0.094	11.4	0.2	2.0	1	1	1	2	2	2	0	Serine	dehydrogenase	proteinase
NifQ	PF04891.7	gi|289596144|ref|YP_003482840.1|	-	0.03	14.4	0.1	0.036	14.2	0.1	1.1	1	0	0	1	1	1	0	NifQ
TipAS	PF07739.8	gi|289596144|ref|YP_003482840.1|	-	0.065	13.5	0.3	5.6	7.3	0.0	2.2	2	0	0	2	2	2	0	TipAS	antibiotic-recognition	domain
YueH	PF14166.1	gi|289596144|ref|YP_003482840.1|	-	0.071	12.8	0.4	0.26	11.0	0.1	2.0	1	1	1	2	2	2	0	YueH-like	protein
MA3	PF02847.12	gi|289596144|ref|YP_003482840.1|	-	0.092	12.4	1.0	0.31	10.7	0.1	2.2	3	0	0	3	3	3	0	MA3	domain
Imm41	PF15583.1	gi|289596144|ref|YP_003482840.1|	-	0.11	12.2	1.0	0.19	11.5	0.7	1.3	1	0	0	1	1	1	0	Immunity	protein	41
Methyltransf_5	PF01795.14	gi|289596144|ref|YP_003482840.1|	-	0.12	11.5	0.5	0.19	10.9	0.3	1.4	1	1	0	1	1	1	0	MraW	methylase	family
RPAP3_C	PF13877.1	gi|289596144|ref|YP_003482840.1|	-	0.13	12.2	0.0	0.18	11.7	0.0	1.2	1	0	0	1	1	1	0	Potential	Monad-binding	region	of	RPAP3
RHH_1	PF01402.16	gi|289596144|ref|YP_003482840.1|	-	0.23	11.4	3.6	0.67	9.9	0.0	3.4	3	2	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
SUV3_C	PF12513.3	gi|289596144|ref|YP_003482840.1|	-	0.66	9.4	3.4	2.9	7.4	0.2	2.5	1	1	1	2	2	2	0	Mitochondrial	degradasome	RNA	helicase	subunit	C	terminal
SNO	PF01174.14	gi|289596145|ref|YP_003482841.1|	-	2e-53	180.8	0.0	2.2e-53	180.6	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|289596145|ref|YP_003482841.1|	-	7.8e-08	32.0	0.1	1.1e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.12	gi|289596145|ref|YP_003482841.1|	-	2.1e-06	27.5	0.0	2.7e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.23	gi|289596145|ref|YP_003482841.1|	-	0.00071	19.0	0.0	0.0014	18.1	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|289596145|ref|YP_003482841.1|	-	0.013	14.9	0.0	0.018	14.5	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
GCV_T	PF01571.16	gi|289596146|ref|YP_003482842.1|	-	1.4e-64	217.3	0.0	1.7e-64	217.0	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|289596146|ref|YP_003482842.1|	-	4.7e-23	81.0	0.1	8.5e-23	80.2	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
SoxG	PF04268.7	gi|289596146|ref|YP_003482842.1|	-	1.3e-06	28.3	0.0	0.0019	18.0	0.0	2.8	2	1	1	3	3	3	2	Sarcosine	oxidase,	gamma	subunit	family
TrmE_N	PF10396.4	gi|289596146|ref|YP_003482842.1|	-	0.011	15.6	0.0	4.9	7.1	0.0	2.2	2	0	0	2	2	2	0	GTP-binding	protein	TrmE	N-terminus
Peptidase_M50	PF02163.17	gi|289596147|ref|YP_003482843.1|	-	2.5e-14	52.6	17.1	2.5e-14	52.6	11.8	2.4	2	1	0	2	2	2	1	Peptidase	family	M50
TPR_2	PF07719.12	gi|289596148|ref|YP_003482844.1|	-	7.6e-131	415.8	97.8	1.2e-09	37.3	0.0	28.6	28	1	1	29	29	29	22	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596148|ref|YP_003482844.1|	-	2e-120	392.5	95.3	7e-15	54.4	1.2	17.6	10	5	10	20	20	20	17	TPR	repeat
TPR_1	PF00515.23	gi|289596148|ref|YP_003482844.1|	-	1.3e-118	382.2	121.1	6.1e-12	44.6	0.1	28.1	29	0	0	29	29	28	21	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289596148|ref|YP_003482844.1|	-	1.3e-100	328.3	22.4	3e-08	34.1	0.0	16.1	10	3	7	18	18	18	16	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289596148|ref|YP_003482844.1|	-	1.1e-81	262.6	151.2	5e-08	32.1	0.2	28.3	18	6	12	30	30	29	19	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289596148|ref|YP_003482844.1|	-	5.4e-81	266.9	64.8	4.4e-08	33.3	0.0	16.7	10	4	10	20	20	19	18	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289596148|ref|YP_003482844.1|	-	1.2e-80	258.5	22.8	1e-05	25.7	0.0	25.5	6	5	20	26	26	26	14	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|289596148|ref|YP_003482844.1|	-	1.4e-75	249.2	87.4	4.8e-09	36.0	0.2	19.1	4	4	17	23	23	23	18	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|289596148|ref|YP_003482844.1|	-	1.6e-68	221.2	79.4	1.6e-06	27.8	0.0	26.9	27	0	0	27	27	26	15	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289596148|ref|YP_003482844.1|	-	6.4e-62	205.3	10.1	6.1e-07	29.2	0.0	14.2	10	4	3	14	14	14	10	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289596148|ref|YP_003482844.1|	-	1.5e-59	198.0	73.9	9e-10	38.5	0.8	14.3	8	4	9	17	17	17	15	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.1	gi|289596148|ref|YP_003482844.1|	-	1.4e-48	158.9	49.9	3.2e-05	23.3	0.0	23.3	21	3	3	24	24	23	10	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|289596148|ref|YP_003482844.1|	-	8.6e-44	145.0	57.2	0.0047	17.3	0.0	22.9	23	0	0	23	23	22	10	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289596148|ref|YP_003482844.1|	-	9.3e-26	88.9	30.9	0.05	13.5	0.0	20.1	20	1	1	21	21	21	3	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|289596148|ref|YP_003482844.1|	-	1.7e-20	72.9	31.1	0.0073	16.4	0.0	15.2	10	4	6	16	16	16	5	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|289596148|ref|YP_003482844.1|	-	1.1e-19	70.6	55.5	0.00032	19.6	1.2	11.5	3	2	8	13	13	13	9	NMDA	receptor-regulated	protein	1
TPR_15	PF13429.1	gi|289596148|ref|YP_003482844.1|	-	7.4e-19	67.8	58.5	1.6e-05	24.1	0.8	9.5	2	1	5	8	8	8	6	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|289596148|ref|YP_003482844.1|	-	9.7e-13	47.7	81.7	0.33	10.8	0.1	20.4	15	7	6	21	21	21	6	Fis1	C-terminal	tetratricopeptide	repeat
ChAPs	PF09295.5	gi|289596148|ref|YP_003482844.1|	-	1.8e-10	40.1	26.5	0.0012	17.6	0.4	8.2	4	1	1	8	8	8	3	ChAPs	(Chs5p-Arf1p-binding	proteins)
BTAD	PF03704.12	gi|289596148|ref|YP_003482844.1|	-	1.2e-07	32.1	2.5	33	4.7	0.0	8.7	7	4	3	10	10	10	0	Bacterial	transcriptional	activator	domain
DUF3856	PF12968.2	gi|289596148|ref|YP_003482844.1|	-	3e-07	30.3	21.5	2.8	7.7	0.0	11.4	10	3	4	14	14	12	2	Domain	of	Unknown	Function	(DUF3856)
MIT	PF04212.13	gi|289596148|ref|YP_003482844.1|	-	4.9e-07	29.5	65.4	0.24	11.2	0.4	16.5	17	3	2	19	19	17	5	MIT	(microtubule	interacting	and	transport)	domain
TPR_5	PF12688.2	gi|289596148|ref|YP_003482844.1|	-	7.2e-07	29.2	3.7	9.4	6.2	0.0	7.6	6	2	1	8	8	7	0	Tetratrico	peptide	repeat
TPR_4	PF07721.9	gi|289596148|ref|YP_003482844.1|	-	4.1e-06	26.7	0.0	1.1e+02	3.7	0.0	8.8	10	0	0	10	10	7	0	Tetratricopeptide	repeat
Apc5	PF12862.2	gi|289596148|ref|YP_003482844.1|	-	0.00029	20.6	10.5	0.57	10.0	0.0	8.4	9	2	1	10	10	9	1	Anaphase-promoting	complex	subunit	5
PPR	PF01535.15	gi|289596148|ref|YP_003482844.1|	-	0.00067	19.4	32.8	2.1	8.4	0.0	13.5	16	0	0	16	16	11	1	PPR	repeat
Rapsyn_N	PF10579.4	gi|289596148|ref|YP_003482844.1|	-	0.00071	19.3	9.0	3	7.6	0.1	8.4	10	1	1	11	11	8	1	Rapsyn	N-terminal	myristoylation	and	linker	region
PPTA	PF01239.17	gi|289596148|ref|YP_003482844.1|	-	0.0018	17.5	19.1	0.021	14.1	0.0	9.0	10	0	0	10	10	9	1	Protein	prenyltransferase	alpha	subunit	repeat
TPR_21	PF09976.4	gi|289596148|ref|YP_003482844.1|	-	0.013	15.4	39.3	0.91	9.4	0.2	9.1	11	2	1	12	12	9	0	Tetratricopeptide	repeat
Ribosomal_S16	PF00886.14	gi|289596148|ref|YP_003482844.1|	-	0.17	11.6	3.2	5.5	6.7	0.1	4.3	5	0	0	5	5	4	0	Ribosomal	protein	S16
SHNi-TPR	PF10516.4	gi|289596148|ref|YP_003482844.1|	-	0.41	9.9	8.9	38	3.6	0.0	6.7	6	0	0	6	6	5	0	SHNi-TPR
Gar1	PF04410.9	gi|289596149|ref|YP_003482845.1|	-	4.8e-06	26.1	0.9	5.3e-06	25.9	0.6	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|289596149|ref|YP_003482845.1|	-	0.082	12.7	1.1	0.14	12.0	0.3	2.0	2	1	0	2	2	2	0	PRC-barrel	domain
TFIIB	PF00382.14	gi|289596150|ref|YP_003482846.1|	-	1.1e-45	153.3	7.3	6.4e-23	80.3	0.2	2.9	3	0	0	3	3	3	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|289596150|ref|YP_003482846.1|	-	4.1e-21	74.0	0.9	7.7e-21	73.1	0.7	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.11	gi|289596150|ref|YP_003482846.1|	-	1.7e-05	24.0	1.4	0.00038	19.7	0.0	3.0	2	2	0	2	2	2	1	Sigma-70,	region	4
Cyclin_C	PF02984.14	gi|289596150|ref|YP_003482846.1|	-	4.9e-05	23.2	0.0	0.06	13.2	0.0	2.3	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
Cyclin_N	PF00134.18	gi|289596150|ref|YP_003482846.1|	-	0.0006	19.3	0.2	0.046	13.2	0.0	2.4	2	1	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_AsnC-type	PF13404.1	gi|289596150|ref|YP_003482846.1|	-	0.0072	15.8	0.3	0.027	14.0	0.2	2.1	1	1	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
zf-ribbon_3	PF13248.1	gi|289596150|ref|YP_003482846.1|	-	0.01	14.9	0.4	0.039	13.1	0.1	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|289596150|ref|YP_003482846.1|	-	0.011	15.1	0.8	0.071	12.5	0.6	2.3	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
HTH_24	PF13412.1	gi|289596150|ref|YP_003482846.1|	-	0.02	14.2	0.5	0.082	12.3	0.0	2.3	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Zn_Tnp_IS1595	PF12760.2	gi|289596150|ref|YP_003482846.1|	-	0.021	14.6	0.4	0.054	13.3	0.3	1.7	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Sigma70_r4_2	PF08281.7	gi|289596150|ref|YP_003482846.1|	-	0.04	13.3	0.3	0.41	10.1	0.1	2.7	2	1	1	3	3	3	0	Sigma-70,	region	4
OrfB_Zn_ribbon	PF07282.6	gi|289596150|ref|YP_003482846.1|	-	0.05	13.2	0.5	0.11	12.1	0.3	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
HTH_3	PF01381.17	gi|289596150|ref|YP_003482846.1|	-	0.052	13.4	1.1	1.1	9.1	0.0	3.5	3	1	1	4	4	4	0	Helix-turn-helix
UPF0147	PF03685.8	gi|289596150|ref|YP_003482846.1|	-	0.053	13.4	0.1	0.45	10.4	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0147)
Lar_restr_allev	PF14354.1	gi|289596150|ref|YP_003482846.1|	-	0.057	13.7	0.3	0.13	12.5	0.2	1.6	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
RRN7	PF11781.3	gi|289596150|ref|YP_003482846.1|	-	0.12	11.9	0.4	0.23	10.9	0.3	1.5	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
HTH_23	PF13384.1	gi|289596150|ref|YP_003482846.1|	-	0.17	11.5	0.2	0.17	11.5	0.2	4.6	3	2	1	4	4	4	0	Homeodomain-like	domain
Zn-ribbon_8	PF09723.5	gi|289596150|ref|YP_003482846.1|	-	0.27	11.2	2.4	0.41	10.6	0.1	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
DUF1886	PF09171.5	gi|289596151|ref|YP_003482847.1|	-	0.031	13.3	0.1	0.082	11.9	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
CheR	PF01739.13	gi|289596151|ref|YP_003482847.1|	-	0.059	12.6	0.0	0.12	11.6	0.0	1.6	1	1	0	1	1	1	0	CheR	methyltransferase,	SAM	binding	domain
Antitoxin-MazE	PF04014.13	gi|289596152|ref|YP_003482848.1|	-	0.028	14.1	0.1	0.058	13.1	0.1	1.6	1	0	0	1	1	1	0	Antidote-toxin	recognition	MazE
B3	PF02362.16	gi|289596152|ref|YP_003482848.1|	-	0.028	14.0	0.1	0.031	13.8	0.1	1.3	1	1	0	1	1	1	0	B3	DNA	binding	domain
Wyosine_form	PF08608.7	gi|289596153|ref|YP_003482849.1|	-	2e-23	82.2	0.2	1.1e-22	79.8	0.0	2.3	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|289596153|ref|YP_003482849.1|	-	4.2e-23	82.3	0.5	1.7e-22	80.3	0.4	1.9	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596153|ref|YP_003482849.1|	-	2.4e-05	24.3	0.2	0.00011	22.2	0.1	2.0	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|289596153|ref|YP_003482849.1|	-	0.00053	20.1	1.0	0.0032	17.6	0.1	2.4	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|289596153|ref|YP_003482849.1|	-	0.01	16.0	0.0	0.021	15.0	0.0	1.6	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
DUF1280	PF06918.9	gi|289596153|ref|YP_003482849.1|	-	0.12	11.5	0.0	0.21	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1280)
FtsX	PF02687.16	gi|289596154|ref|YP_003482850.1|	-	5.5e-26	90.6	34.1	1.5e-15	57.0	5.8	4.6	4	1	1	5	5	5	2	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|289596154|ref|YP_003482850.1|	-	1.4e-09	37.9	2.2	1.4e-09	37.9	1.5	4.1	3	1	0	3	3	3	2	MacB-like	periplasmic	core	domain
ABC_tran	PF00005.22	gi|289596155|ref|YP_003482851.1|	-	1.6e-31	109.4	0.0	2.2e-31	108.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596155|ref|YP_003482851.1|	-	6.4e-13	49.3	0.2	6.9e-07	29.5	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|289596155|ref|YP_003482851.1|	-	4.9e-08	32.4	0.0	0.0001	21.6	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|289596155|ref|YP_003482851.1|	-	3.2e-05	23.1	0.0	0.11	11.5	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|289596155|ref|YP_003482851.1|	-	0.00038	20.7	0.1	0.08	13.2	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|289596155|ref|YP_003482851.1|	-	0.0011	18.4	0.0	0.0026	17.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|289596155|ref|YP_003482851.1|	-	0.0012	18.7	0.2	0.0026	17.6	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289596155|ref|YP_003482851.1|	-	0.0013	18.7	0.0	0.0022	18.0	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289596155|ref|YP_003482851.1|	-	0.0034	17.5	0.1	0.021	14.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|289596155|ref|YP_003482851.1|	-	0.0053	17.1	0.1	0.031	14.6	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|289596155|ref|YP_003482851.1|	-	0.012	16.4	0.1	0.029	15.1	0.0	1.8	2	1	0	2	2	1	0	AAA	domain
DUF258	PF03193.11	gi|289596155|ref|YP_003482851.1|	-	0.017	14.3	0.0	0.027	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|289596155|ref|YP_003482851.1|	-	0.025	14.2	0.2	0.29	10.8	0.2	2.1	1	1	0	1	1	1	0	Archaeal	ATPase
T2SE	PF00437.15	gi|289596155|ref|YP_003482851.1|	-	0.033	13.0	0.0	0.065	12.1	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|289596155|ref|YP_003482851.1|	-	0.034	13.8	0.2	0.086	12.5	0.0	1.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|289596155|ref|YP_003482851.1|	-	0.037	13.4	0.3	0.23	10.8	0.0	2.3	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
FtsK_SpoIIIE	PF01580.13	gi|289596155|ref|YP_003482851.1|	-	0.043	13.2	0.0	0.14	11.5	0.0	1.7	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
NACHT	PF05729.7	gi|289596155|ref|YP_003482851.1|	-	0.046	13.3	0.2	0.079	12.6	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
DEAD	PF00270.24	gi|289596155|ref|YP_003482851.1|	-	0.047	13.1	0.0	0.094	12.2	0.0	1.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
Pox_A32	PF04665.7	gi|289596155|ref|YP_003482851.1|	-	0.047	12.9	0.3	0.12	11.6	0.0	1.7	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_25	PF13481.1	gi|289596155|ref|YP_003482851.1|	-	0.051	12.9	0.0	0.1	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|289596155|ref|YP_003482851.1|	-	0.067	12.7	0.0	0.14	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|289596155|ref|YP_003482851.1|	-	0.098	11.4	0.1	0.18	10.6	0.0	1.4	2	0	0	2	2	1	0	NB-ARC	domain
AAA_14	PF13173.1	gi|289596155|ref|YP_003482851.1|	-	0.1	12.4	0.1	0.25	11.2	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.17	gi|289596155|ref|YP_003482851.1|	-	0.1	12.7	0.0	0.21	11.7	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_24	PF13479.1	gi|289596155|ref|YP_003482851.1|	-	0.11	12.1	0.0	0.57	9.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
SRPRB	PF09439.5	gi|289596155|ref|YP_003482851.1|	-	0.11	11.7	0.0	0.2	10.8	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Zeta_toxin	PF06414.7	gi|289596155|ref|YP_003482851.1|	-	0.12	11.4	0.1	0.26	10.3	0.0	1.6	2	0	0	2	2	1	0	Zeta	toxin
UPF0079	PF02367.12	gi|289596155|ref|YP_003482851.1|	-	0.13	11.8	0.0	0.25	10.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|289596155|ref|YP_003482851.1|	-	0.14	12.3	0.3	0.3	11.2	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|289596155|ref|YP_003482851.1|	-	0.15	11.4	0.0	0.37	10.1	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF123	PF01986.11	gi|289596156|ref|YP_003482852.1|	-	2.5e-26	91.6	0.1	3.1e-26	91.3	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.19	gi|289596156|ref|YP_003482852.1|	-	9.5e-05	22.6	1.8	0.00014	22.1	1.2	1.5	1	1	0	1	1	1	1	GIY-YIG	catalytic	domain
Ribosomal_S15	PF00312.17	gi|289596156|ref|YP_003482852.1|	-	0.1	12.3	1.2	0.17	11.6	0.8	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S15
PfkB	PF00294.19	gi|289596157|ref|YP_003482853.1|	-	1.5e-29	103.0	0.0	5.4e-29	101.2	0.0	1.7	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|289596157|ref|YP_003482853.1|	-	0.0099	15.0	0.0	0.013	14.6	0.0	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Ribul_P_3_epim	PF00834.14	gi|289596158|ref|YP_003482854.1|	-	1.9e-77	258.9	0.5	2.2e-77	258.7	0.4	1.0	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
PcrB	PF01884.12	gi|289596158|ref|YP_003482854.1|	-	0.00037	19.8	4.4	0.0012	18.1	2.7	2.0	1	1	1	2	2	2	1	PcrB	family
QRPTase_C	PF01729.14	gi|289596158|ref|YP_003482854.1|	-	0.0078	15.7	0.1	0.015	14.8	0.1	1.5	1	1	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TMP-TENI	PF02581.12	gi|289596158|ref|YP_003482854.1|	-	0.03	13.4	0.7	0.037	13.1	0.1	1.5	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
Formyl_trans_N	PF00551.14	gi|289596159|ref|YP_003482855.1|	-	1.1e-54	184.7	0.0	1.4e-54	184.3	0.0	1.1	1	0	0	1	1	1	1	Formyl	transferase
ADH_zinc_N_2	PF13602.1	gi|289596159|ref|YP_003482855.1|	-	0.0062	17.4	0.0	0.058	14.2	0.0	2.2	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
Orthopox_A36R	PF05950.6	gi|289596160|ref|YP_003482856.1|	-	0.8	9.6	3.6	5.6	6.8	0.1	2.0	1	1	1	2	2	2	0	Orthopoxvirus	A36R	protein
Diphthamide_syn	PF01866.12	gi|289596161|ref|YP_003482857.1|	-	2.3e-86	289.8	0.0	2.7e-86	289.6	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Vpu	PF00558.14	gi|289596162|ref|YP_003482858.1|	-	1.1	8.8	5.6	1.5	8.4	1.4	2.0	2	0	0	2	2	2	0	Vpu	protein
DUF4083	PF13314.1	gi|289596162|ref|YP_003482858.1|	-	5.2	6.9	8.2	5.4	6.9	1.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4083)
GMP_synt_C	PF00958.17	gi|289596163|ref|YP_003482859.1|	-	1.8e-34	117.2	0.0	5.1e-34	115.8	0.0	1.7	2	0	0	2	2	2	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|289596163|ref|YP_003482859.1|	-	8.6e-10	37.9	0.2	1.1e-07	31.0	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|289596163|ref|YP_003482859.1|	-	8.6e-06	24.5	0.1	0.0081	14.7	0.0	2.2	2	0	0	2	2	2	2	tRNA	methyl	transferase
QueC	PF06508.8	gi|289596163|ref|YP_003482859.1|	-	1.7e-05	24.2	0.0	0.00054	19.3	0.0	2.1	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|289596163|ref|YP_003482859.1|	-	7.4e-05	22.3	0.0	0.00012	21.6	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.14	gi|289596163|ref|YP_003482859.1|	-	9e-05	22.3	0.0	0.00013	21.8	0.0	1.3	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ThiI	PF02568.9	gi|289596163|ref|YP_003482859.1|	-	0.00017	21.1	0.0	0.00093	18.7	0.0	2.0	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Arginosuc_synth	PF00764.14	gi|289596163|ref|YP_003482859.1|	-	0.00033	19.8	0.1	0.00057	19.0	0.1	1.3	1	0	0	1	1	1	1	Arginosuccinate	synthase
Asn_synthase	PF00733.16	gi|289596163|ref|YP_003482859.1|	-	0.005	16.3	0.0	0.0077	15.7	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
DUF2392	PF10288.4	gi|289596163|ref|YP_003482859.1|	-	0.097	13.0	0.0	0.79	10.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2392)
AIRC	PF00731.15	gi|289596164|ref|YP_003482860.1|	-	5.8e-44	149.0	0.1	6.5e-44	148.8	0.0	1.0	1	0	0	1	1	1	1	AIR	carboxylase
cwf21	PF08312.7	gi|289596164|ref|YP_003482860.1|	-	0.018	14.8	2.8	0.026	14.3	2.0	1.2	1	0	0	1	1	1	0	cwf21	domain
DUF1129	PF06570.6	gi|289596165|ref|YP_003482861.1|	-	0.33	10.2	9.2	0.39	9.9	6.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF3422	PF11902.3	gi|289596165|ref|YP_003482861.1|	-	0.52	9.1	1.6	0.64	8.8	1.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3422)
AsnC_trans_reg	PF01037.16	gi|289596166|ref|YP_003482862.1|	-	2.9e-16	58.9	0.0	3.3e-16	58.7	0.0	1.0	1	0	0	1	1	1	1	AsnC	family
NapD	PF03927.8	gi|289596166|ref|YP_003482862.1|	-	0.051	13.4	0.0	0.061	13.1	0.0	1.1	1	0	0	1	1	1	0	NapD	protein
XPG_I	PF00867.13	gi|289596167|ref|YP_003482863.1|	-	2.4e-26	91.6	0.0	4.6e-26	90.7	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|289596167|ref|YP_003482863.1|	-	2.7e-18	66.0	0.0	6.2e-18	64.9	0.0	1.6	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|289596167|ref|YP_003482863.1|	-	3.8e-09	36.6	0.1	9.8e-09	35.3	0.1	1.7	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_2	PF12826.2	gi|289596167|ref|YP_003482863.1|	-	0.00031	20.5	0.0	0.00081	19.2	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|289596167|ref|YP_003482863.1|	-	0.003	17.6	0.0	0.0083	16.2	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
Rad51	PF08423.6	gi|289596168|ref|YP_003482864.1|	-	4.9e-34	117.4	0.2	6e-34	117.0	0.1	1.1	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|289596168|ref|YP_003482864.1|	-	5.7e-17	61.7	0.0	7.1e-17	61.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|289596168|ref|YP_003482864.1|	-	2e-11	43.5	0.1	2.4e-11	43.2	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|289596168|ref|YP_003482864.1|	-	2.6e-10	39.7	2.7	1e-09	37.8	1.9	1.9	1	1	0	1	1	1	1	KaiC
Zot	PF05707.7	gi|289596168|ref|YP_003482864.1|	-	5.6e-07	29.2	0.1	7.2e-07	28.8	0.1	1.1	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
ATP-synt_ab	PF00006.20	gi|289596168|ref|YP_003482864.1|	-	1.5e-05	24.5	0.2	2.1e-05	24.1	0.1	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|289596168|ref|YP_003482864.1|	-	0.00034	20.3	0.5	0.0005	19.8	0.4	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|289596168|ref|YP_003482864.1|	-	0.0027	17.8	0.1	0.0045	17.2	0.1	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PhoH	PF02562.11	gi|289596168|ref|YP_003482864.1|	-	0.011	14.9	0.2	0.04	13.1	0.0	1.7	1	1	0	2	2	2	0	PhoH-like	protein
TrwB_AAD_bind	PF10412.4	gi|289596168|ref|YP_003482864.1|	-	0.011	14.3	0.0	0.016	13.8	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_31	PF13614.1	gi|289596168|ref|YP_003482864.1|	-	0.019	14.9	0.0	0.035	14.0	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|289596168|ref|YP_003482864.1|	-	0.027	13.8	0.2	0.093	12.1	0.0	1.9	1	1	1	2	2	2	0	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|289596168|ref|YP_003482864.1|	-	0.027	14.1	0.3	0.11	12.1	0.2	1.8	1	1	0	1	1	1	0	NACHT	domain
SRP54	PF00448.17	gi|289596168|ref|YP_003482864.1|	-	0.031	13.7	0.0	0.04	13.3	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_10	PF12846.2	gi|289596168|ref|YP_003482864.1|	-	0.042	13.2	0.3	2.1	7.6	0.0	2.2	1	1	1	2	2	2	0	AAA-like	domain
DnaB_C	PF03796.10	gi|289596168|ref|YP_003482864.1|	-	0.046	12.5	0.5	0.58	8.9	0.0	2.1	1	1	1	2	2	2	0	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.4	gi|289596168|ref|YP_003482864.1|	-	0.048	12.6	0.0	0.058	12.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
ArsA_ATPase	PF02374.10	gi|289596168|ref|YP_003482864.1|	-	0.1	11.6	0.1	0.36	9.8	0.0	1.8	2	0	0	2	2	2	0	Anion-transporting	ATPase
IlvGEDA_leader	PF08046.6	gi|289596169|ref|YP_003482865.1|	-	3.2	7.0	5.1	0.68	9.1	0.4	2.2	2	0	0	2	2	2	0	IlvGEDA	operon	leader	peptide
Trm56	PF01994.11	gi|289596170|ref|YP_003482866.1|	-	3.9e-49	165.3	0.0	5.7e-49	164.8	0.0	1.2	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
UbiA	PF01040.13	gi|289596171|ref|YP_003482867.1|	-	0.0013	17.9	8.9	0.0019	17.5	6.1	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
PalH	PF08733.5	gi|289596171|ref|YP_003482867.1|	-	0.01	14.6	1.0	0.013	14.3	0.7	1.1	1	0	0	1	1	1	0	PalH/RIM21
DUF4131	PF13567.1	gi|289596171|ref|YP_003482867.1|	-	0.29	10.5	12.8	4.8	6.5	8.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF843	PF05814.6	gi|289596171|ref|YP_003482867.1|	-	0.63	9.8	5.7	0.52	10.1	2.7	1.7	2	0	0	2	2	2	0	Baculovirus	protein	of	unknown	function	(DUF843)
NfeD	PF01957.13	gi|289596171|ref|YP_003482867.1|	-	1	9.5	8.2	3.9	7.5	0.6	2.1	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
YfhO	PF09586.5	gi|289596171|ref|YP_003482867.1|	-	1.6	6.6	6.1	2.1	6.2	4.2	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
PrgI	PF12666.2	gi|289596171|ref|YP_003482867.1|	-	5	7.3	13.3	15	5.7	0.1	2.2	2	0	0	2	2	2	0	PrgI	family	protein
ArsR	PF09824.4	gi|289596172|ref|YP_003482868.1|	-	6.4e-45	152.3	0.9	7.2e-45	152.1	0.6	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
Pyr_redox_2	PF07992.9	gi|289596173|ref|YP_003482869.1|	-	7.7e-27	94.4	0.0	1.6e-26	93.4	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|289596173|ref|YP_003482869.1|	-	9e-24	83.6	0.3	2.1e-23	82.4	0.2	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|289596173|ref|YP_003482869.1|	-	2.1e-13	50.4	0.1	6.7e-13	48.8	0.0	1.9	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596173|ref|YP_003482869.1|	-	5.5e-06	26.5	0.0	1.3e-05	25.4	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|289596173|ref|YP_003482869.1|	-	0.0011	18.1	0.0	0.35	9.9	0.0	2.5	2	0	0	2	2	2	2	Thi4	family
K_oxygenase	PF13434.1	gi|289596173|ref|YP_003482869.1|	-	0.0034	16.3	0.0	0.053	12.4	0.0	2.3	1	1	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
UDPG_MGDP_dh_N	PF03721.9	gi|289596173|ref|YP_003482869.1|	-	0.013	14.8	0.0	0.022	14.1	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|289596173|ref|YP_003482869.1|	-	0.065	13.2	0.0	1.3	9.1	0.0	2.6	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
PAS_9	PF13426.1	gi|289596174|ref|YP_003482870.1|	-	8.4e-52	173.9	2.3	7.7e-18	64.7	0.0	4.8	5	0	0	5	5	4	3	PAS	domain
PAS	PF00989.19	gi|289596174|ref|YP_003482870.1|	-	5e-46	155.1	0.2	7.7e-14	51.4	0.0	4.4	4	0	0	4	4	4	3	PAS	fold
GAF_3	PF13492.1	gi|289596174|ref|YP_003482870.1|	-	7.7e-40	135.9	0.0	6e-16	58.7	0.0	3.5	3	0	0	3	3	3	3	GAF	domain
GAF_2	PF13185.1	gi|289596174|ref|YP_003482870.1|	-	6.1e-36	124.1	0.0	2.5e-14	53.9	0.0	4.1	4	0	0	4	4	4	3	GAF	domain
PAS_3	PF08447.6	gi|289596174|ref|YP_003482870.1|	-	1.1e-26	92.7	0.0	1.4e-08	34.7	0.0	3.6	3	0	0	3	3	3	3	PAS	fold
PAS_4	PF08448.5	gi|289596174|ref|YP_003482870.1|	-	4.3e-25	87.8	0.0	3.3e-08	33.5	0.0	4.6	4	1	0	4	4	4	3	PAS	fold
PAS_8	PF13188.1	gi|289596174|ref|YP_003482870.1|	-	8.6e-24	82.5	1.4	4.6e-07	29.4	0.0	4.4	4	0	0	4	4	4	3	PAS	domain
GAF	PF01590.21	gi|289596174|ref|YP_003482870.1|	-	1.5e-21	77.0	0.0	4.7e-09	36.5	0.0	3.6	4	0	0	4	4	3	3	GAF	domain
HATPase_c	PF02518.21	gi|289596174|ref|YP_003482870.1|	-	6.4e-20	70.9	0.0	1.4e-19	69.8	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.1	gi|289596174|ref|YP_003482870.1|	-	2.8e-16	59.7	0.5	5.5e-05	23.3	0.0	4.3	4	0	0	4	4	3	3	PAS	domain
HisKA	PF00512.20	gi|289596174|ref|YP_003482870.1|	-	6.4e-10	38.8	0.1	3.1e-09	36.6	0.0	2.3	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_7	PF12860.2	gi|289596174|ref|YP_003482870.1|	-	1.1e-08	35.0	0.2	0.02	14.9	0.0	4.5	4	2	0	4	4	4	2	PAS	fold
SPOB_a	PF14689.1	gi|289596174|ref|YP_003482870.1|	-	1.6e-05	24.3	0.5	5.5e-05	22.6	0.3	2.0	1	0	0	1	1	1	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
HATPase_c_2	PF13581.1	gi|289596174|ref|YP_003482870.1|	-	5.1e-05	23.0	0.0	9.5e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
PAS_11	PF14598.1	gi|289596174|ref|YP_003482870.1|	-	5.7e-05	23.0	0.0	2.5	8.0	0.0	4.5	4	1	1	5	5	5	1	PAS	domain
Bro-N	PF02498.12	gi|289596174|ref|YP_003482870.1|	-	0.00028	21.1	0.3	10	6.4	0.0	4.4	4	0	0	4	4	3	0	BRO	family,	N-terminal	domain
DUF3369	PF11849.3	gi|289596174|ref|YP_003482870.1|	-	0.0022	17.9	2.0	2.5	7.9	0.1	3.8	3	1	1	4	4	4	1	Domain	of	unknown	function	(DUF3369)
DUF2976	PF11190.3	gi|289596174|ref|YP_003482870.1|	-	0.0048	16.3	2.5	0.41	10.2	0.0	3.9	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF2976)
OTU	PF02338.14	gi|289596174|ref|YP_003482870.1|	-	0.0068	16.9	0.0	0.96	10.0	0.0	3.0	2	0	0	2	2	2	1	OTU-like	cysteine	protease
HATPase_c_3	PF13589.1	gi|289596174|ref|YP_003482870.1|	-	0.022	14.4	0.0	0.05	13.2	0.0	1.6	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Tbf5	PF06331.7	gi|289596174|ref|YP_003482870.1|	-	0.06	13.1	1.0	8.7	6.2	0.0	3.4	3	0	0	3	3	3	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
DUF2111	PF09884.4	gi|289596174|ref|YP_003482870.1|	-	0.24	11.2	5.5	8.7	6.2	0.0	3.7	4	0	0	4	4	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
AdoMet_dc	PF02675.10	gi|289596175|ref|YP_003482871.1|	-	1.3e-31	108.6	0.0	1.5e-31	108.4	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF377	PF04041.8	gi|289596175|ref|YP_003482871.1|	-	0.056	12.1	0.1	0.5	9.0	0.0	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF377)
DUF43	PF01861.11	gi|289596176|ref|YP_003482872.1|	-	5.4e-83	277.6	1.4	6.7e-83	277.4	0.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
Methyltransf_31	PF13847.1	gi|289596176|ref|YP_003482872.1|	-	0.00039	20.0	0.0	0.00068	19.2	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289596176|ref|YP_003482872.1|	-	0.0041	17.1	0.0	0.0068	16.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
HTH_45	PF14947.1	gi|289596176|ref|YP_003482872.1|	-	0.023	14.4	0.3	0.066	13.0	0.2	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix
HemN_C	PF06969.11	gi|289596176|ref|YP_003482872.1|	-	0.032	14.2	0.0	0.087	12.8	0.0	1.8	1	0	0	1	1	1	0	HemN	C-terminal	domain
PvlArgDC	PF01862.11	gi|289596177|ref|YP_003482873.1|	-	1.9e-65	219.4	0.0	2.1e-65	219.3	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
DEAD	PF00270.24	gi|289596178|ref|YP_003482874.1|	-	2.1e-49	167.2	0.0	7.7e-47	158.9	0.0	2.2	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|289596178|ref|YP_003482874.1|	-	8.8e-27	92.7	0.1	2.9e-26	91.1	0.1	2.0	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|289596178|ref|YP_003482874.1|	-	6.3e-05	22.8	0.0	0.00025	20.9	0.0	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DUF1253	PF06862.7	gi|289596178|ref|YP_003482874.1|	-	0.00059	18.3	0.0	0.066	11.6	0.0	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1253)
Flavi_DEAD	PF07652.9	gi|289596178|ref|YP_003482874.1|	-	0.01	15.6	0.1	0.05	13.3	0.0	2.1	3	0	0	3	3	3	1	Flavivirus	DEAD	domain
SecA_DEAD	PF07517.9	gi|289596178|ref|YP_003482874.1|	-	0.093	12.0	0.0	0.23	10.6	0.0	1.7	1	1	0	1	1	1	0	SecA	DEAD-like	domain
PHF5	PF03660.9	gi|289596179|ref|YP_003482875.1|	-	0.00041	20.3	0.3	0.00042	20.3	0.2	1.1	1	0	0	1	1	1	1	PHF5-like	protein
DZR	PF12773.2	gi|289596179|ref|YP_003482875.1|	-	0.011	15.4	0.4	0.016	15.0	0.2	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|289596179|ref|YP_003482875.1|	-	0.067	12.9	0.4	0.095	12.4	0.3	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
C1_3	PF07649.7	gi|289596179|ref|YP_003482875.1|	-	0.076	13.0	1.7	0.11	12.6	1.2	1.3	1	0	0	1	1	1	0	C1-like	domain
Cript	PF10235.4	gi|289596179|ref|YP_003482875.1|	-	0.13	12.6	2.7	0.28	11.5	1.8	1.6	1	1	0	1	1	1	0	Microtubule-associated	protein	CRIPT
PLATZ	PF04640.9	gi|289596179|ref|YP_003482875.1|	-	0.15	12.2	1.6	0.28	11.4	0.5	1.7	2	0	0	2	2	2	0	PLATZ	transcription	factor
zf-ribbon_3	PF13248.1	gi|289596179|ref|YP_003482875.1|	-	0.16	11.2	0.4	0.25	10.6	0.3	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Gin	PF10764.4	gi|289596179|ref|YP_003482875.1|	-	0.35	10.6	3.8	0.93	9.2	2.7	1.8	1	1	0	1	1	1	0	Inhibitor	of	sigma-G	Gin
Band_7	PF01145.20	gi|289596181|ref|YP_003482877.1|	-	1.3e-40	139.2	2.2	3e-40	138.0	1.5	1.6	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|289596181|ref|YP_003482877.1|	-	0.012	15.1	0.1	0.019	14.4	0.1	1.4	1	0	0	1	1	1	0	SPFH	domain-Band	7	family
SRP_SPB	PF02978.14	gi|289596181|ref|YP_003482877.1|	-	0.16	12.2	2.2	2.6	8.3	0.1	2.4	2	0	0	2	2	2	0	Signal	peptide	binding	domain
Nop16	PF09420.5	gi|289596181|ref|YP_003482877.1|	-	0.46	10.5	5.1	0.69	9.9	0.2	2.2	2	0	0	2	2	2	0	Ribosome	biogenesis	protein	Nop16
NfeD	PF01957.13	gi|289596182|ref|YP_003482878.1|	-	1.6e-20	73.6	8.6	1.8e-20	73.5	6.0	1.0	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
DUF872	PF05915.7	gi|289596182|ref|YP_003482878.1|	-	3.3	7.5	6.4	5.6	6.8	4.5	1.5	1	0	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF1469	PF07332.6	gi|289596182|ref|YP_003482878.1|	-	3.4	7.4	17.1	0.3	10.8	6.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF1418	PF07214.7	gi|289596182|ref|YP_003482878.1|	-	7.8	6.1	9.7	18	5.0	6.7	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1418)
Rad17	PF03215.10	gi|289596184|ref|YP_003482880.1|	-	1.7e-16	59.9	0.1	3e-08	32.8	0.0	3.0	2	1	0	3	3	3	2	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|289596184|ref|YP_003482880.1|	-	2.2e-13	50.5	0.4	3.4e-12	46.7	0.0	2.4	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|289596184|ref|YP_003482880.1|	-	2.3e-07	31.0	0.1	4.6e-06	26.8	0.1	3.0	2	1	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|289596184|ref|YP_003482880.1|	-	5.9e-07	30.3	1.6	4.5e-06	27.4	1.1	2.8	1	1	0	1	1	1	1	AAA	domain
DNA_pol3_delta	PF06144.8	gi|289596184|ref|YP_003482880.1|	-	9.2e-07	28.5	0.0	1.9e-06	27.5	0.0	1.5	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Zeta_toxin	PF06414.7	gi|289596184|ref|YP_003482880.1|	-	1.3e-06	27.7	0.6	3.3e-06	26.3	0.0	2.0	3	0	0	3	3	3	1	Zeta	toxin
RuvB_N	PF05496.7	gi|289596184|ref|YP_003482880.1|	-	4.1e-06	26.0	0.0	2.3e-05	23.5	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|289596184|ref|YP_003482880.1|	-	6.3e-06	26.1	0.6	2e-05	24.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|289596184|ref|YP_003482880.1|	-	2.5e-05	24.5	0.1	7.8e-05	22.9	0.1	1.9	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|289596184|ref|YP_003482880.1|	-	7.2e-05	21.6	0.0	0.011	14.4	0.0	2.2	2	0	0	2	2	2	1	TIP49	C-terminus
DUF815	PF05673.8	gi|289596184|ref|YP_003482880.1|	-	7.7e-05	21.7	0.0	0.0003	19.8	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
DUF2075	PF09848.4	gi|289596184|ref|YP_003482880.1|	-	7.8e-05	21.8	0.0	0.0002	20.4	0.0	1.6	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_5	PF07728.9	gi|289596184|ref|YP_003482880.1|	-	0.00011	21.9	0.0	0.00025	20.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|289596184|ref|YP_003482880.1|	-	0.00014	21.8	0.0	0.0012	18.9	0.0	2.1	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|289596184|ref|YP_003482880.1|	-	0.00028	20.8	0.0	0.00055	19.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|289596184|ref|YP_003482880.1|	-	0.00055	19.9	0.0	0.0015	18.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|289596184|ref|YP_003482880.1|	-	0.001	19.4	0.1	0.0032	17.7	0.0	1.9	1	1	0	1	1	1	1	ABC	transporter
SKI	PF01202.17	gi|289596184|ref|YP_003482880.1|	-	0.0032	17.3	0.0	0.007	16.2	0.0	1.6	1	0	0	1	1	1	1	Shikimate	kinase
Viral_helicase1	PF01443.13	gi|289596184|ref|YP_003482880.1|	-	0.005	16.3	0.0	0.011	15.2	0.0	1.6	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
RFC1	PF08519.7	gi|289596184|ref|YP_003482880.1|	-	0.0051	16.5	0.1	0.0084	15.8	0.1	1.3	1	0	0	1	1	1	1	Replication	factor	RFC1	C	terminal	domain
tRNA_lig_kinase	PF08303.6	gi|289596184|ref|YP_003482880.1|	-	0.0061	16.4	0.0	0.017	15.0	0.0	1.8	1	0	0	1	1	1	1	tRNA	ligase	kinase	domain
ADK	PF00406.17	gi|289596184|ref|YP_003482880.1|	-	0.0072	16.2	0.0	0.017	14.9	0.0	1.6	1	0	0	1	1	1	1	Adenylate	kinase
Bac_DnaA	PF00308.13	gi|289596184|ref|YP_003482880.1|	-	0.0079	15.8	0.4	4.5	6.8	0.0	3.2	3	1	0	3	3	3	0	Bacterial	dnaA	protein
NACHT	PF05729.7	gi|289596184|ref|YP_003482880.1|	-	0.0091	15.6	0.2	0.026	14.1	0.1	1.8	1	1	0	1	1	1	1	NACHT	domain
AAA_19	PF13245.1	gi|289596184|ref|YP_003482880.1|	-	0.011	15.4	0.0	0.025	14.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|289596184|ref|YP_003482880.1|	-	0.013	15.7	0.0	0.033	14.3	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_2	PF07724.9	gi|289596184|ref|YP_003482880.1|	-	0.013	15.3	0.0	0.042	13.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
Sigma54_activ_2	PF14532.1	gi|289596184|ref|YP_003482880.1|	-	0.032	14.2	0.0	0.081	12.9	0.0	1.7	2	0	0	2	2	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|289596184|ref|YP_003482880.1|	-	0.036	13.6	0.0	0.081	12.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289596184|ref|YP_003482880.1|	-	0.038	13.4	0.2	4.2	6.7	0.0	2.6	3	0	0	3	3	3	0	AAA-like	domain
NB-ARC	PF00931.17	gi|289596184|ref|YP_003482880.1|	-	0.04	12.7	0.0	0.086	11.6	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.1	gi|289596184|ref|YP_003482880.1|	-	0.048	13.0	0.5	1.8	7.9	0.2	2.8	1	1	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|289596184|ref|YP_003482880.1|	-	0.06	13.0	0.1	1.6	8.4	0.0	2.6	2	0	0	2	2	2	0	NTPase
PduV-EutP	PF10662.4	gi|289596184|ref|YP_003482880.1|	-	0.069	12.6	0.0	0.17	11.3	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_3	PF07726.6	gi|289596184|ref|YP_003482880.1|	-	0.08	12.5	0.0	1.8	8.1	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|289596184|ref|YP_003482880.1|	-	0.088	11.9	0.0	0.16	11.1	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.1	gi|289596184|ref|YP_003482880.1|	-	0.11	12.0	0.5	0.79	9.2	0.1	2.6	2	1	0	2	2	2	0	AAA	domain
HSBP1	PF06825.7	gi|289596185|ref|YP_003482881.1|	-	0.039	13.5	2.1	0.045	13.3	1.5	1.1	1	0	0	1	1	1	0	Heat	shock	factor	binding	protein	1
RPA_interact_M	PF14767.1	gi|289596185|ref|YP_003482881.1|	-	0.063	14.0	3.4	0.061	14.0	2.3	1.0	1	0	0	1	1	1	0	Replication	protein	A	interacting	middle
UBN2_2	PF14227.1	gi|289596185|ref|YP_003482881.1|	-	0.12	11.9	0.2	0.12	11.9	0.1	1.0	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
DUF2987	PF11205.3	gi|289596185|ref|YP_003482881.1|	-	0.14	11.8	0.0	0.14	11.8	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2987)
TIM	PF00121.13	gi|289596186|ref|YP_003482882.1|	-	1.9e-23	82.7	2.2	6.3e-14	51.6	0.1	2.0	1	1	1	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|289596186|ref|YP_003482882.1|	-	3.5e-09	36.0	1.2	6e-09	35.3	0.5	1.5	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.15	gi|289596186|ref|YP_003482882.1|	-	8.9e-07	27.6	1.2	1.5e-06	26.9	0.4	1.6	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
FMN_dh	PF01070.13	gi|289596186|ref|YP_003482882.1|	-	1.7e-06	27.1	0.3	3e-06	26.3	0.2	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|289596186|ref|YP_003482882.1|	-	3.1e-06	26.5	0.9	3.8e-06	26.2	0.2	1.4	2	0	0	2	2	2	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|289596186|ref|YP_003482882.1|	-	1.1e-05	24.8	1.8	2.7e-05	23.5	0.3	2.0	1	1	0	2	2	2	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|289596186|ref|YP_003482882.1|	-	8.1e-05	21.9	1.9	0.0002	20.6	0.9	1.9	2	1	0	2	2	2	1	PcrB	family
IGPS	PF00218.16	gi|289596186|ref|YP_003482882.1|	-	0.00018	20.6	0.3	0.00023	20.2	0.2	1.2	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
DHO_dh	PF01180.16	gi|289596186|ref|YP_003482882.1|	-	0.004	16.1	0.8	0.0055	15.7	0.5	1.5	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
IMPDH	PF00478.20	gi|289596186|ref|YP_003482882.1|	-	0.0063	15.4	0.7	0.012	14.5	0.5	1.4	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.7	gi|289596186|ref|YP_003482882.1|	-	0.014	14.3	0.4	0.35	9.7	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
BtpA	PF03437.10	gi|289596186|ref|YP_003482882.1|	-	0.025	13.8	2.5	0.14	11.3	0.3	2.1	2	0	0	2	2	2	0	BtpA	family
Dus	PF01207.12	gi|289596186|ref|YP_003482882.1|	-	0.034	12.9	1.0	0.04	12.7	0.1	1.5	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
Glu_synthase	PF01645.12	gi|289596186|ref|YP_003482882.1|	-	0.037	12.9	0.1	0.071	12.0	0.1	1.4	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
POC1	PF10450.4	gi|289596186|ref|YP_003482882.1|	-	0.1	11.3	0.1	0.15	10.8	0.0	1.2	1	0	0	1	1	1	0	POC1	chaperone
DUF4131	PF13567.1	gi|289596187|ref|YP_003482883.1|	-	3.6e-05	23.2	0.5	5.2e-05	22.7	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4131)
PIG-P	PF08510.7	gi|289596187|ref|YP_003482883.1|	-	0.0056	16.3	2.4	0.0084	15.7	1.7	1.3	1	0	0	1	1	1	1	PIG-P
CbiQ	PF02361.11	gi|289596187|ref|YP_003482883.1|	-	0.027	14.0	2.1	0.037	13.5	1.5	1.3	1	0	0	1	1	1	0	Cobalt	transport	protein
Yip1	PF04893.12	gi|289596187|ref|YP_003482883.1|	-	0.028	13.9	4.9	0.036	13.5	3.4	1.2	1	0	0	1	1	1	0	Yip1	domain
DUF1772	PF08592.6	gi|289596187|ref|YP_003482883.1|	-	0.12	12.1	0.7	0.18	11.4	0.5	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
DUF4181	PF13789.1	gi|289596187|ref|YP_003482883.1|	-	0.25	11.3	8.0	0.09	12.7	3.4	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4181)
Colicin_V	PF02674.11	gi|289596187|ref|YP_003482883.1|	-	0.31	10.8	13.6	0.46	10.3	9.4	1.1	1	0	0	1	1	1	0	Colicin	V	production	protein
DUF1516	PF07457.6	gi|289596187|ref|YP_003482883.1|	-	0.78	9.8	8.3	1.4	9.0	5.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1516)
DUF3329	PF11808.3	gi|289596187|ref|YP_003482883.1|	-	2	8.5	6.3	0.63	10.1	1.5	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3329)
DUF2101	PF09874.4	gi|289596187|ref|YP_003482883.1|	-	2.7	7.4	9.6	4.1	6.8	6.7	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2101)
DUF1129	PF06570.6	gi|289596187|ref|YP_003482883.1|	-	3.7	6.7	7.1	32	3.7	4.9	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
tRNA_NucTransf2	PF09249.6	gi|289596188|ref|YP_003482884.1|	-	1.8e-41	140.6	0.0	4.2e-41	139.3	0.0	1.7	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|289596188|ref|YP_003482884.1|	-	2.3e-15	56.6	0.1	6.4e-15	55.2	0.1	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
API5	PF05918.6	gi|289596188|ref|YP_003482884.1|	-	0.15	10.5	0.0	0.25	9.8	0.0	1.2	1	0	0	1	1	1	0	Apoptosis	inhibitory	protein	5	(API5)
NAC	PF01849.13	gi|289596189|ref|YP_003482885.1|	-	2.6e-10	39.6	1.2	5.8e-10	38.5	0.5	1.8	2	0	0	2	2	2	1	NAC	domain
UBA	PF00627.26	gi|289596189|ref|YP_003482885.1|	-	1.9e-06	27.5	0.2	3.4e-06	26.7	0.1	1.4	1	0	0	1	1	1	1	UBA/TS-N	domain
UBA_4	PF14555.1	gi|289596189|ref|YP_003482885.1|	-	0.0011	18.4	0.0	0.0015	17.9	0.0	1.3	1	0	0	1	1	1	1	UBA-like	domain
Gp_dh_N	PF00044.19	gi|289596189|ref|YP_003482885.1|	-	0.0032	17.4	0.2	0.0041	17.0	0.2	1.3	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ANTAR	PF03861.9	gi|289596189|ref|YP_003482885.1|	-	0.0083	15.6	1.2	0.51	9.9	0.0	2.4	2	0	0	2	2	2	1	ANTAR	domain
Cytidylate_kin2	PF13189.1	gi|289596189|ref|YP_003482885.1|	-	0.029	14.3	0.9	0.083	12.7	0.6	1.7	1	1	0	1	1	1	0	Cytidylate	kinase-like	family
RRF_GI	PF12614.3	gi|289596189|ref|YP_003482885.1|	-	0.11	12.3	1.5	0.51	10.1	1.1	2.1	1	1	0	1	1	1	0	Ribosome	recycling	factor
DUF2064	PF09837.4	gi|289596189|ref|YP_003482885.1|	-	0.12	11.9	0.0	14	5.3	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
SPT6_acidic	PF14632.1	gi|289596189|ref|YP_003482885.1|	-	0.15	12.2	1.6	0.21	11.7	1.0	1.3	1	1	0	1	1	1	0	Acidic	N-terminal	SPT6
NRDD	PF13597.1	gi|289596190|ref|YP_003482886.1|	-	2.6e-217	722.2	0.0	2.9e-217	722.0	0.0	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
DUF372	PF04036.7	gi|289596190|ref|YP_003482886.1|	-	0.024	14.1	0.0	0.048	13.1	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF372)
Radical_SAM	PF04055.16	gi|289596191|ref|YP_003482887.1|	-	2.7e-25	89.4	0.1	3.7e-25	89.0	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596191|ref|YP_003482887.1|	-	1.5e-11	44.3	0.1	5e-11	42.6	0.0	1.8	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|289596191|ref|YP_003482887.1|	-	9.6e-11	41.9	0.2	2.7e-10	40.4	0.0	1.8	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
HSDR_N	PF04313.9	gi|289596192|ref|YP_003482888.1|	-	3.8e-09	36.5	0.4	3.2e-05	23.7	0.0	2.8	2	1	1	3	3	3	2	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N_2	PF13588.1	gi|289596192|ref|YP_003482888.1|	-	8.7e-06	25.5	0.0	1.9e-05	24.4	0.0	1.6	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
SeqA	PF03925.8	gi|289596192|ref|YP_003482888.1|	-	0.00018	21.2	0.0	0.00046	19.9	0.0	1.7	1	1	0	1	1	1	1	SeqA	protein
VRR_NUC	PF08774.6	gi|289596192|ref|YP_003482888.1|	-	0.0054	16.7	0.0	0.012	15.5	0.0	1.6	1	0	0	1	1	1	1	VRR-NUC	domain
PDDEXK_3	PF13366.1	gi|289596192|ref|YP_003482888.1|	-	0.017	15.1	0.1	0.043	13.8	0.0	1.6	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
SfsA	PF03749.8	gi|289596192|ref|YP_003482888.1|	-	0.039	13.4	0.0	0.067	12.6	0.0	1.3	1	0	0	1	1	1	0	Sugar	fermentation	stimulation	protein
PsbY	PF06298.6	gi|289596192|ref|YP_003482888.1|	-	0.11	12.0	0.7	0.22	11.0	0.5	1.4	1	0	0	1	1	1	0	Photosystem	II	protein	Y	(PsbY)
MFS_1	PF07690.11	gi|289596193|ref|YP_003482889.1|	-	2.5e-50	171.1	52.1	2.5e-50	171.1	36.1	2.4	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|289596193|ref|YP_003482889.1|	-	0.00098	17.3	16.3	0.00098	17.3	11.3	2.3	2	0	0	2	2	2	1	Transmembrane	secretion	effector
DUF2371	PF10177.4	gi|289596193|ref|YP_003482889.1|	-	1.7	8.5	10.3	2.7	7.8	0.2	3.6	3	0	0	3	3	3	0	Uncharacterised	conserved	protein	(DUF2371)
DUF4367	PF14285.1	gi|289596194|ref|YP_003482890.1|	-	0.051	12.8	2.9	0.085	12.1	0.0	2.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4367)
HEPN	PF05168.9	gi|289596194|ref|YP_003482890.1|	-	0.14	12.0	1.7	0.99	9.3	0.0	2.5	2	1	1	3	3	3	0	HEPN	domain
Ion_trans_2	PF07885.11	gi|289596195|ref|YP_003482891.1|	-	8.7e-14	50.9	12.3	8.7e-14	50.9	8.5	1.6	1	1	1	2	2	2	1	Ion	channel
UPF0014	PF03649.8	gi|289596195|ref|YP_003482891.1|	-	2.2	7.3	11.2	9.6	5.2	7.8	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0014)
Glycos_transf_2	PF00535.21	gi|289596196|ref|YP_003482892.1|	-	4.5e-30	104.5	0.1	7.4e-30	103.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|289596196|ref|YP_003482892.1|	-	4.4e-23	82.2	0.0	5.5e-22	78.6	0.0	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|289596196|ref|YP_003482892.1|	-	4.5e-14	52.2	0.2	3.1e-07	29.7	0.0	2.2	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|289596196|ref|YP_003482892.1|	-	3.1e-08	33.5	0.1	1.2e-07	31.5	0.1	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_7C	PF02709.9	gi|289596196|ref|YP_003482892.1|	-	8e-06	25.2	0.0	1.6e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	N-terminal	domain	of	galactosyltransferase
Glyco_transf_21	PF13506.1	gi|289596196|ref|YP_003482892.1|	-	0.0013	18.0	0.0	0.017	14.3	0.0	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|289596196|ref|YP_003482892.1|	-	0.05	13.9	0.0	0.12	12.7	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.21	gi|289596197|ref|YP_003482893.1|	-	6.9e-29	100.6	0.0	9.4e-29	100.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|289596197|ref|YP_003482893.1|	-	4.2e-15	56.1	0.0	4.7e-15	56.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|289596197|ref|YP_003482893.1|	-	1.9e-05	23.9	0.0	2.6e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|289596197|ref|YP_003482893.1|	-	0.029	13.6	0.0	0.042	13.1	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.1	gi|289596197|ref|YP_003482893.1|	-	0.074	12.7	0.0	0.091	12.4	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	transferase	family	group	2
PCNA_N	PF00705.13	gi|289596198|ref|YP_003482894.1|	-	1.6e-12	47.0	0.2	2.9e-11	42.9	0.2	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|289596198|ref|YP_003482894.1|	-	1.4e-10	41.1	0.3	1.2e-09	38.1	0.0	2.5	2	2	1	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|289596198|ref|YP_003482894.1|	-	0.00029	19.6	0.0	0.047	12.4	0.0	2.3	2	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
DNA_pol3_beta_2	PF02767.11	gi|289596198|ref|YP_003482894.1|	-	0.064	13.2	0.1	29	4.7	0.0	3.1	2	1	1	3	3	3	0	DNA	polymerase	III	beta	subunit,	central	domain
CheW	PF01584.14	gi|289596198|ref|YP_003482894.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	CheW-like	domain
CbiA	PF01656.18	gi|289596199|ref|YP_003482895.1|	-	1e-26	93.5	0.1	1.4e-26	93.0	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.4	gi|289596199|ref|YP_003482895.1|	-	4.8e-26	90.4	0.0	9.2e-26	89.5	0.0	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
AAA_31	PF13614.1	gi|289596199|ref|YP_003482895.1|	-	2.1e-11	43.9	0.1	4.8e-09	36.3	0.0	2.5	2	1	1	3	3	3	1	AAA	domain
MipZ	PF09140.6	gi|289596199|ref|YP_003482895.1|	-	1.8e-08	33.8	0.0	2.8e-08	33.1	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|289596199|ref|YP_003482895.1|	-	3.5e-08	32.8	0.2	3.9e-07	29.4	0.1	2.3	2	0	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.13	gi|289596199|ref|YP_003482895.1|	-	1.2e-05	24.6	0.3	0.034	13.3	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.1	gi|289596199|ref|YP_003482895.1|	-	9.3e-05	22.1	0.1	0.39	10.2	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|289596199|ref|YP_003482895.1|	-	0.00019	20.9	0.8	0.0005	19.5	0.6	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|289596199|ref|YP_003482895.1|	-	0.00021	20.9	1.9	0.00097	18.8	0.2	2.4	2	1	0	2	2	2	1	Part	of	AAA	domain
APS_kinase	PF01583.15	gi|289596199|ref|YP_003482895.1|	-	0.00063	19.4	0.1	0.001	18.7	0.1	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
SRP54	PF00448.17	gi|289596199|ref|YP_003482895.1|	-	0.0011	18.5	1.4	0.0017	17.8	0.3	1.8	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
VirC1	PF07015.6	gi|289596199|ref|YP_003482895.1|	-	0.0011	18.0	0.0	0.0019	17.3	0.0	1.3	1	0	0	1	1	1	1	VirC1	protein
DUF258	PF03193.11	gi|289596199|ref|YP_003482895.1|	-	0.0013	17.9	0.2	0.0022	17.1	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|289596199|ref|YP_003482895.1|	-	0.0032	16.9	0.0	0.0086	15.5	0.0	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
PhoH	PF02562.11	gi|289596199|ref|YP_003482895.1|	-	0.005	16.1	0.4	0.0099	15.1	0.3	1.4	1	0	0	1	1	1	1	PhoH-like	protein
NB-ARC	PF00931.17	gi|289596199|ref|YP_003482895.1|	-	0.0092	14.8	0.6	0.014	14.2	0.4	1.2	1	0	0	1	1	1	1	NB-ARC	domain
ArgK	PF03308.11	gi|289596199|ref|YP_003482895.1|	-	0.016	13.9	0.2	0.03	13.0	0.2	1.4	1	0	0	1	1	1	0	ArgK	protein
MobB	PF03205.9	gi|289596199|ref|YP_003482895.1|	-	0.022	14.4	0.4	0.052	13.2	0.3	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
YhjQ	PF06564.7	gi|289596199|ref|YP_003482895.1|	-	0.024	14.0	0.2	0.75	9.1	0.0	2.1	2	0	0	2	2	2	0	YhjQ	protein
AAA_17	PF13207.1	gi|289596199|ref|YP_003482895.1|	-	0.038	14.8	0.7	0.41	11.4	0.4	2.3	2	1	0	2	2	2	0	AAA	domain
KTI12	PF08433.5	gi|289596199|ref|YP_003482895.1|	-	0.077	12.1	0.1	0.2	10.8	0.0	1.6	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_22	PF13401.1	gi|289596199|ref|YP_003482895.1|	-	0.086	12.9	0.1	0.2	11.8	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|289596199|ref|YP_003482895.1|	-	0.1	11.4	0.2	0.17	10.7	0.2	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|289596199|ref|YP_003482895.1|	-	0.12	12.5	0.7	0.64	10.2	0.2	2.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|289596199|ref|YP_003482895.1|	-	0.13	12.2	0.1	2.3	8.1	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|289596199|ref|YP_003482895.1|	-	0.3	10.7	1.0	0.51	9.9	0.7	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_18	PF13238.1	gi|289596199|ref|YP_003482895.1|	-	1	9.6	4.0	0.36	11.1	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
Thy1	PF02511.10	gi|289596200|ref|YP_003482896.1|	-	7e-64	214.6	1.0	8.4e-64	214.4	0.7	1.0	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
Kin17_mid	PF10357.4	gi|289596200|ref|YP_003482896.1|	-	0.074	12.6	0.1	8.5	6.0	0.0	2.4	2	0	0	2	2	2	0	Domain	of	Kin17	curved	DNA-binding	protein
tRNA_anti-codon	PF01336.20	gi|289596201|ref|YP_003482897.1|	-	0.00082	19.1	0.9	0.028	14.2	0.5	3.0	2	1	1	3	3	3	2	OB-fold	nucleic	acid	binding	domain
tRNA_anti-like	PF12869.2	gi|289596201|ref|YP_003482897.1|	-	0.21	11.0	0.1	0.21	11.0	0.1	2.6	2	1	1	3	3	3	0	tRNA_anti-like
PLDc_2	PF13091.1	gi|289596202|ref|YP_003482898.1|	-	7.7e-28	96.7	1.8	9.8e-28	96.4	1.2	1.1	1	0	0	1	1	1	1	PLD-like	domain
PLDc	PF00614.17	gi|289596202|ref|YP_003482898.1|	-	0.00061	19.5	1.1	0.0015	18.2	0.8	1.6	1	0	0	1	1	1	1	Phospholipase	D	Active	site	motif
DUF4006	PF13179.1	gi|289596202|ref|YP_003482898.1|	-	0.028	13.9	0.0	0.06	12.8	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF4006)
DUF2139	PF09910.4	gi|289596203|ref|YP_003482899.1|	-	2.5e-135	450.8	0.5	3.2e-135	450.5	0.4	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2139)
Peptidase_C69	PF03577.10	gi|289596204|ref|YP_003482900.1|	-	7.7e-09	34.9	1.6	7.7e-09	34.9	1.1	2.1	2	1	0	2	2	2	1	Peptidase	family	C69
AAT	PF03417.11	gi|289596204|ref|YP_003482900.1|	-	1.5e-05	24.5	0.0	2.9e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
DUF2031	PF09592.5	gi|289596204|ref|YP_003482900.1|	-	0.022	13.9	4.9	0.03	13.4	2.7	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2031)
ROK	PF00480.15	gi|289596205|ref|YP_003482901.1|	-	3.4e-24	85.6	0.8	4.5e-24	85.2	0.5	1.2	1	0	0	1	1	1	1	ROK	family
BcrAD_BadFG	PF01869.15	gi|289596205|ref|YP_003482901.1|	-	0.00099	18.4	0.7	0.56	9.4	0.1	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
Hydant_A_N	PF05378.8	gi|289596205|ref|YP_003482901.1|	-	0.0015	18.0	0.2	0.0028	17.1	0.2	1.4	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
Glucokinase	PF02685.11	gi|289596205|ref|YP_003482901.1|	-	0.0047	15.7	0.4	0.11	11.2	0.1	2.5	2	1	0	2	2	2	1	Glucokinase
hDGE_amylase	PF14701.1	gi|289596205|ref|YP_003482901.1|	-	0.14	11.0	0.0	0.24	10.2	0.0	1.3	1	0	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
ATP-synt_DE	PF00401.15	gi|289596205|ref|YP_003482901.1|	-	0.15	12.0	1.6	0.27	11.1	1.1	1.4	1	0	0	1	1	1	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
Glyco_hydro_1	PF00232.13	gi|289596206|ref|YP_003482902.1|	-	3.7e-91	305.5	9.4	3.6e-90	302.3	6.5	1.9	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|289596206|ref|YP_003482902.1|	-	4.3e-11	42.5	0.1	1e-10	41.3	0.1	1.5	1	1	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
Glyco_hydro_cc	PF11790.3	gi|289596206|ref|YP_003482902.1|	-	0.043	13.2	0.7	0.13	11.6	0.1	1.9	2	0	0	2	2	2	0	Glycosyl	hydrolase	catalytic	core
MFS_1	PF07690.11	gi|289596207|ref|YP_003482903.1|	-	2.3e-54	184.4	43.7	2.1e-45	154.9	22.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|289596207|ref|YP_003482903.1|	-	6.1e-17	61.3	31.1	9e-17	60.7	21.6	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
ATG22	PF11700.3	gi|289596207|ref|YP_003482903.1|	-	1.7e-07	30.1	35.8	0.00015	20.3	8.0	2.6	1	1	2	3	3	3	2	Vacuole	effluxer	Atg22	like
OATP	PF03137.15	gi|289596207|ref|YP_003482903.1|	-	0.00025	19.2	24.3	0.0013	16.8	0.4	4.1	3	1	1	4	4	4	4	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MFS_1_like	PF12832.2	gi|289596207|ref|YP_003482903.1|	-	0.00053	19.7	12.0	0.017	14.8	0.1	4.6	3	1	2	5	5	5	2	MFS_1	like	family
Glyco_hydro_57	PF03065.10	gi|289596208|ref|YP_003482904.1|	-	1.3e-37	129.5	1.2	2.1e-35	122.2	0.8	2.4	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
Polysacc_deac_1	PF01522.16	gi|289596208|ref|YP_003482904.1|	-	0.00031	20.3	0.0	0.0005	19.7	0.0	1.3	1	0	0	1	1	1	1	Polysaccharide	deacetylase
GalKase_gal_bdg	PF10509.4	gi|289596209|ref|YP_003482905.1|	-	6.4e-17	60.5	0.1	2.5e-16	58.6	0.0	2.0	2	0	0	2	2	2	1	Galactokinase	galactose-binding	signature
GHMP_kinases_C	PF08544.8	gi|289596209|ref|YP_003482905.1|	-	1.2e-14	54.1	0.1	3.3e-14	52.8	0.0	1.9	1	1	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|289596209|ref|YP_003482905.1|	-	5.4e-14	52.0	1.8	1.7e-13	50.3	0.0	2.3	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
2-Hacid_dh_C	PF02826.14	gi|289596210|ref|YP_003482906.1|	-	9.5e-43	145.4	0.0	1.9e-42	144.4	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|289596210|ref|YP_003482906.1|	-	1.3e-10	40.8	0.0	1.7e-10	40.5	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|289596210|ref|YP_003482906.1|	-	0.00063	19.6	0.2	0.0056	16.5	0.0	2.3	2	2	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
PTPS	PF01242.14	gi|289596210|ref|YP_003482906.1|	-	0.015	14.9	0.1	0.034	13.8	0.0	1.6	1	1	0	1	1	1	0	6-pyruvoyl	tetrahydropterin	synthase
PDH	PF02153.12	gi|289596210|ref|YP_003482906.1|	-	0.039	12.8	0.1	0.07	12.0	0.0	1.3	1	0	0	1	1	1	0	Prephenate	dehydrogenase
TPR_16	PF13432.1	gi|289596211|ref|YP_003482907.1|	-	4.4e-10	39.9	3.0	9.6e-05	22.9	0.3	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289596211|ref|YP_003482907.1|	-	2.6e-09	36.2	7.4	3.1e-05	23.5	0.1	4.4	3	1	1	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289596211|ref|YP_003482907.1|	-	9e-09	35.3	4.0	5.5e-06	26.4	0.8	2.5	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.23	gi|289596211|ref|YP_003482907.1|	-	1.5e-08	33.8	11.4	5e-07	29.0	0.2	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596211|ref|YP_003482907.1|	-	3.6e-08	32.9	10.0	5.6e-08	32.3	1.0	3.2	1	1	2	3	3	3	1	TPR	repeat
TPR_12	PF13424.1	gi|289596211|ref|YP_003482907.1|	-	6.2e-07	29.2	7.5	2.4e-05	24.1	1.4	3.3	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289596211|ref|YP_003482907.1|	-	1.1e-06	28.7	2.5	0.0036	17.8	0.0	4.5	2	1	3	5	5	4	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289596211|ref|YP_003482907.1|	-	2.3e-06	27.8	5.5	0.012	15.9	0.3	2.8	1	1	1	3	3	3	3	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289596211|ref|YP_003482907.1|	-	5.3e-06	25.8	20.2	0.00015	21.2	0.5	5.3	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|289596211|ref|YP_003482907.1|	-	0.00038	20.7	8.7	0.0026	18.1	0.0	4.0	4	0	0	4	4	4	1	Tetratricopeptide	repeat
RPN7	PF10602.4	gi|289596211|ref|YP_003482907.1|	-	0.0024	17.2	1.0	0.028	13.7	0.1	2.2	1	1	0	2	2	2	1	26S	proteasome	subunit	RPN7
NARP1	PF12569.3	gi|289596211|ref|YP_003482907.1|	-	0.0052	15.6	7.7	0.089	11.5	5.1	2.4	1	1	0	1	1	1	1	NMDA	receptor-regulated	protein	1
TPR_7	PF13176.1	gi|289596211|ref|YP_003482907.1|	-	0.0099	15.6	6.1	0.016	14.9	0.1	3.5	4	0	0	4	4	4	1	Tetratricopeptide	repeat
PPR	PF01535.15	gi|289596211|ref|YP_003482907.1|	-	0.063	13.2	0.9	16	5.7	0.0	3.5	4	1	1	5	5	4	0	PPR	repeat
TPR_17	PF13431.1	gi|289596211|ref|YP_003482907.1|	-	3.3	8.1	8.4	70	4.0	0.1	5.0	4	2	0	4	4	4	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596212|ref|YP_003482908.1|	-	2.4e-56	187.2	58.8	1.2e-18	66.5	1.5	6.5	2	1	6	8	8	8	8	TPR	repeat
TPR_1	PF00515.23	gi|289596212|ref|YP_003482908.1|	-	6.8e-41	136.2	39.5	7.9e-10	37.9	0.2	9.6	9	0	0	9	9	9	8	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289596212|ref|YP_003482908.1|	-	7.3e-36	119.1	37.8	4.6e-07	29.2	0.0	10.4	10	0	0	10	10	9	8	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289596212|ref|YP_003482908.1|	-	3.8e-29	100.6	23.6	8.1e-07	29.5	0.0	6.9	5	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289596212|ref|YP_003482908.1|	-	1.4e-26	90.1	39.1	6.3e-05	22.4	0.1	9.8	8	1	1	9	9	9	6	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289596212|ref|YP_003482908.1|	-	1.8e-25	89.0	24.6	1.8e-06	28.1	3.6	6.9	5	1	1	6	6	6	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|289596212|ref|YP_003482908.1|	-	7e-23	80.3	28.9	3.4e-08	33.3	2.7	7.2	3	1	4	7	7	6	6	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|289596212|ref|YP_003482908.1|	-	1.9e-21	74.4	24.5	1.3e-05	24.9	0.5	8.8	9	0	0	9	9	8	5	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289596212|ref|YP_003482908.1|	-	3.9e-19	67.4	16.9	0.0038	17.7	0.1	9.0	4	2	5	9	9	8	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289596212|ref|YP_003482908.1|	-	2.5e-16	59.5	26.7	3.7e-07	30.1	0.0	6.1	3	3	4	7	7	7	5	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.1	gi|289596212|ref|YP_003482908.1|	-	6.5e-15	53.6	25.7	0.31	10.9	0.0	9.9	8	1	2	10	10	10	5	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289596212|ref|YP_003482908.1|	-	1.3e-13	50.5	1.3	4.5e-05	23.2	0.0	5.0	2	2	2	4	4	4	3	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289596212|ref|YP_003482908.1|	-	1.7e-09	37.2	19.1	0.079	12.9	0.0	8.8	9	0	0	9	9	9	4	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|289596212|ref|YP_003482908.1|	-	1.3e-07	31.6	20.3	0.00024	21.0	0.0	5.5	5	2	0	5	5	5	3	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|289596212|ref|YP_003482908.1|	-	1.5e-07	30.7	14.7	0.028	13.4	1.3	5.9	3	1	3	6	6	6	3	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|289596212|ref|YP_003482908.1|	-	1.7e-05	24.9	29.5	2.5	8.7	0.2	9.8	9	1	0	9	9	9	2	Tetratricopeptide	repeat
Mrr_cat	PF04471.7	gi|289596212|ref|YP_003482908.1|	-	0.00086	19.1	0.2	0.0079	15.9	0.0	2.7	1	1	1	2	2	2	1	Restriction	endonuclease
Fis1_TPR_C	PF14853.1	gi|289596212|ref|YP_003482908.1|	-	0.0012	18.7	25.7	0.52	10.2	0.1	8.1	6	1	2	8	8	8	2	Fis1	C-terminal	tetratricopeptide	repeat
MIT	PF04212.13	gi|289596212|ref|YP_003482908.1|	-	0.0038	17.0	13.9	2.9	7.8	0.2	5.9	5	0	0	5	5	5	2	MIT	(microtubule	interacting	and	transport)	domain
Coatomer_E	PF04733.9	gi|289596212|ref|YP_003482908.1|	-	0.012	14.8	15.1	0.022	13.9	0.5	4.3	3	1	1	4	4	4	0	Coatomer	epsilon	subunit
TPR_20	PF14561.1	gi|289596212|ref|YP_003482908.1|	-	0.015	15.3	14.6	30	4.7	0.0	6.4	5	1	1	6	6	6	0	Tetratricopeptide	repeat
Sigma54_CBD	PF04963.8	gi|289596212|ref|YP_003482908.1|	-	0.019	14.4	2.3	0.034	13.5	0.7	2.1	2	1	0	2	2	2	0	Sigma-54	factor,	core	binding	domain
Alkyl_sulf_dimr	PF14863.1	gi|289596212|ref|YP_003482908.1|	-	0.051	13.8	0.1	0.051	13.8	0.1	4.4	3	1	1	5	5	5	0	Alkyl	sulfatase	dimerisation
Lipoprotein_6	PF01441.14	gi|289596212|ref|YP_003482908.1|	-	0.35	10.6	7.6	0.063	13.1	2.3	1.9	2	0	0	2	2	1	0	Lipoprotein
YfdX	PF10938.3	gi|289596212|ref|YP_003482908.1|	-	1.9	8.1	18.2	10	5.7	0.1	6.4	6	1	1	7	7	7	0	YfdX	protein
PPR	PF01535.15	gi|289596212|ref|YP_003482908.1|	-	2	8.5	12.0	76	3.6	0.0	7.3	8	1	1	9	9	7	0	PPR	repeat
Glyco_hyd_65N_2	PF14498.1	gi|289596212|ref|YP_003482908.1|	-	4.8	6.7	7.0	56	3.3	0.0	3.8	4	0	0	4	4	4	0	Glycosyl	hydrolase	family	65,	N-terminal	domain
FliG_N	PF14842.1	gi|289596212|ref|YP_003482908.1|	-	5.6	7.1	10.6	0.66	10.1	0.1	4.2	4	2	1	5	5	5	0	FliG	N-terminal	domain
Fe-ADH_2	PF13685.1	gi|289596213|ref|YP_003482909.1|	-	1.4e-63	214.5	1.0	1.8e-63	214.1	0.7	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|289596213|ref|YP_003482909.1|	-	7.1e-26	90.7	3.4	1.7e-25	89.4	2.4	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|289596213|ref|YP_003482909.1|	-	2.2e-12	46.4	0.6	6.3e-12	44.9	0.4	1.7	1	1	0	1	1	1	1	3-dehydroquinate	synthase
AAA_8	PF12780.2	gi|289596213|ref|YP_003482909.1|	-	0.02	13.8	0.0	0.032	13.1	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region	D4
UPF0179	PF03684.8	gi|289596214|ref|YP_003482910.1|	-	1.1e-48	164.4	1.4	1.2e-48	164.3	1.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
MMR_HSR1_C	PF08438.5	gi|289596215|ref|YP_003482911.1|	-	2.5e-36	124.2	0.0	3.9e-36	123.5	0.0	1.3	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|289596215|ref|YP_003482911.1|	-	8.5e-17	61.1	0.0	1.9e-16	60.0	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|289596215|ref|YP_003482911.1|	-	4.9e-12	45.5	0.0	1e-11	44.4	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|289596215|ref|YP_003482911.1|	-	2.6e-09	36.5	0.0	5.5e-07	28.9	0.0	2.4	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.8	gi|289596215|ref|YP_003482911.1|	-	0.0017	18.1	0.1	0.7	9.7	0.0	2.5	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF933)
ThiS	PF02597.15	gi|289596215|ref|YP_003482911.1|	-	0.051	14.0	0.1	1	9.8	0.0	2.4	2	0	0	2	2	2	0	ThiS	family
DUF2142	PF09913.4	gi|289596216|ref|YP_003482912.1|	-	0.04	12.5	2.1	0.05	12.2	1.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2142)
DUF4231	PF14015.1	gi|289596216|ref|YP_003482912.1|	-	2.4	8.1	6.8	6.8	6.7	4.7	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
DUF1469	PF07332.6	gi|289596216|ref|YP_003482912.1|	-	8.4	6.1	12.8	20	4.9	8.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF1628	PF07790.6	gi|289596217|ref|YP_003482913.1|	-	2.6e-10	40.9	0.2	4.4e-10	40.1	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
DUF3821	PF12863.2	gi|289596217|ref|YP_003482913.1|	-	0.011	15.4	1.0	0.049	13.2	0.4	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3821)
DUF1628	PF07790.6	gi|289596218|ref|YP_003482914.1|	-	5.1e-12	46.3	2.2	5.1e-12	46.3	1.5	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1628)
EF-hand_6	PF13405.1	gi|289596218|ref|YP_003482914.1|	-	0.02	14.7	0.0	1.2	9.1	0.0	2.4	2	0	0	2	2	2	0	EF-hand	domain
EF-hand_1	PF00036.27	gi|289596218|ref|YP_003482914.1|	-	0.12	11.7	0.2	2.8	7.4	0.0	2.3	2	0	0	2	2	2	0	EF	hand
TrkA_N	PF02254.13	gi|289596219|ref|YP_003482915.1|	-	8.1e-31	106.4	1.2	1.4e-30	105.6	0.8	1.4	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|289596219|ref|YP_003482915.1|	-	4.4e-13	48.6	2.0	8.1e-13	47.7	0.7	1.9	2	0	0	2	2	2	1	TrkA-C	domain
F420_oxidored	PF03807.12	gi|289596219|ref|YP_003482915.1|	-	1.1e-08	35.4	0.5	4e-08	33.5	0.1	2.1	1	1	2	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.1	gi|289596219|ref|YP_003482915.1|	-	2.3e-06	27.8	0.4	4.3e-06	26.9	0.1	1.6	2	0	0	2	2	1	1	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|289596219|ref|YP_003482915.1|	-	1.1e-05	25.5	0.3	3.1e-05	24.0	0.2	1.8	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_10	PF13460.1	gi|289596219|ref|YP_003482915.1|	-	2.6e-05	24.3	0.4	3.7e-05	23.8	0.3	1.3	1	0	0	1	1	1	1	NADH(P)-binding
Saccharop_dh	PF03435.13	gi|289596219|ref|YP_003482915.1|	-	3.5e-05	22.9	0.2	5.1e-05	22.4	0.1	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ADH_zinc_N	PF00107.21	gi|289596219|ref|YP_003482915.1|	-	8e-05	22.1	1.1	0.0002	20.8	0.2	2.0	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
ApbA	PF02558.11	gi|289596219|ref|YP_003482915.1|	-	0.00043	19.7	0.1	0.00068	19.0	0.1	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NmrA	PF05368.8	gi|289596219|ref|YP_003482915.1|	-	0.00066	19.0	0.4	0.0016	17.7	0.2	1.7	1	1	0	1	1	1	1	NmrA-like	family
NAD_binding_2	PF03446.10	gi|289596219|ref|YP_003482915.1|	-	0.00095	19.0	0.7	0.0071	16.1	0.1	2.0	1	1	1	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|289596219|ref|YP_003482915.1|	-	0.0091	15.3	0.9	0.037	13.4	0.6	2.1	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.1	gi|289596219|ref|YP_003482915.1|	-	0.013	15.8	0.0	0.056	13.7	0.0	1.9	2	0	0	2	2	2	0	XdhC	Rossmann	domain
DAO	PF01266.19	gi|289596219|ref|YP_003482915.1|	-	0.014	14.3	0.3	0.029	13.2	0.1	1.6	1	1	1	2	2	2	0	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|289596219|ref|YP_003482915.1|	-	0.015	14.9	0.1	0.023	14.3	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|289596219|ref|YP_003482915.1|	-	0.019	15.2	0.1	0.028	14.6	0.1	1.4	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
3Beta_HSD	PF01073.14	gi|289596219|ref|YP_003482915.1|	-	0.041	12.5	0.2	0.051	12.2	0.1	1.3	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
GFO_IDH_MocA	PF01408.17	gi|289596219|ref|YP_003482915.1|	-	0.042	14.3	0.1	0.069	13.6	0.1	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Pyr_redox	PF00070.22	gi|289596219|ref|YP_003482915.1|	-	0.043	14.2	0.6	0.47	10.8	0.1	2.8	3	1	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkH	PF02386.11	gi|289596220|ref|YP_003482916.1|	-	3.2e-46	157.5	37.5	5e-46	156.9	18.8	2.4	2	1	0	2	2	2	2	Cation	transport	protein
COX8	PF02285.10	gi|289596220|ref|YP_003482916.1|	-	0.64	9.5	3.3	1.4	8.5	1.1	2.5	2	0	0	2	2	2	0	Cytochrome	oxidase	c	subunit	VIII
VCBS	PF13517.1	gi|289596221|ref|YP_003482917.1|	-	6.4e-13	48.8	32.9	0.0001	22.5	2.8	5.8	2	1	4	6	6	6	6	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
FG-GAP	PF01839.18	gi|289596221|ref|YP_003482917.1|	-	1.5e-11	43.6	21.6	0.015	14.9	0.1	6.4	6	0	0	6	6	6	5	FG-GAP	repeat
TcdB_toxin_midN	PF12256.3	gi|289596221|ref|YP_003482917.1|	-	1.5e-05	24.4	7.1	1.1	8.6	0.0	5.2	4	1	1	5	5	5	3	Insecticide	toxin	TcdB	middle/N-terminal	region
PQQ	PF01011.16	gi|289596221|ref|YP_003482917.1|	-	0.00056	19.3	6.4	1.8	8.2	0.0	5.5	6	0	0	6	6	6	1	PQQ	enzyme	repeat
BBS2_N	PF14781.1	gi|289596221|ref|YP_003482917.1|	-	0.098	12.2	1.9	0.15	11.6	0.0	2.2	3	0	0	3	3	3	0	Ciliary	BBSome	complex	subunit	2,	N-terminal
HypA	PF01155.14	gi|289596222|ref|YP_003482918.1|	-	0.0031	17.1	1.7	0.0055	16.3	0.5	1.7	1	1	1	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
HTH_37	PF13744.1	gi|289596222|ref|YP_003482918.1|	-	0.0064	16.2	0.1	0.0081	15.9	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
C1_1	PF00130.17	gi|289596222|ref|YP_003482918.1|	-	0.016	14.9	2.0	0.024	14.3	1.4	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Zn-ribbon_8	PF09723.5	gi|289596222|ref|YP_003482918.1|	-	0.056	13.4	5.5	0.16	11.9	3.8	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|289596222|ref|YP_003482918.1|	-	0.057	13.2	2.2	0.12	12.2	1.6	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
TFIIS_C	PF01096.13	gi|289596222|ref|YP_003482918.1|	-	0.062	12.9	4.4	1.8	8.2	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Cas_Cas4	PF01930.12	gi|289596222|ref|YP_003482918.1|	-	0.062	13.2	0.1	0.1	12.5	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF83
zinc_ribbon_2	PF13240.1	gi|289596222|ref|YP_003482918.1|	-	0.073	12.5	5.6	0.16	11.4	3.9	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
HTH_11	PF08279.7	gi|289596222|ref|YP_003482918.1|	-	0.081	12.5	0.1	0.11	12.1	0.1	1.2	1	0	0	1	1	1	0	HTH	domain
zinc_ribbon_5	PF13719.1	gi|289596222|ref|YP_003482918.1|	-	0.087	12.4	7.9	0.63	9.6	0.2	2.6	3	0	0	3	3	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596222|ref|YP_003482918.1|	-	0.09	12.4	5.0	3	7.6	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
IF2_N	PF04760.10	gi|289596222|ref|YP_003482918.1|	-	0.13	11.9	0.1	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
zf-H2C2_2	PF13465.1	gi|289596222|ref|YP_003482918.1|	-	0.21	11.9	6.0	2.1	8.8	0.1	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
RNA_POL_M_15KD	PF02150.11	gi|289596222|ref|YP_003482918.1|	-	0.22	11.2	1.6	0.97	9.1	0.0	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
PhnA_Zn_Ribbon	PF08274.7	gi|289596222|ref|YP_003482918.1|	-	0.22	11.3	1.3	5.6	6.8	0.4	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
TF_Zn_Ribbon	PF08271.7	gi|289596222|ref|YP_003482918.1|	-	0.22	10.8	3.1	3.2	7.1	0.2	2.7	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF2082	PF09855.4	gi|289596222|ref|YP_003482918.1|	-	0.41	10.5	2.1	7.3	6.5	0.1	2.3	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zinc_ribbon_4	PF13717.1	gi|289596222|ref|YP_003482918.1|	-	0.43	10.3	9.2	1	9.1	0.2	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
DUF4379	PF14311.1	gi|289596222|ref|YP_003482918.1|	-	0.91	9.3	8.2	0.99	9.2	2.6	2.8	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF4379)
DUF2072	PF09845.4	gi|289596222|ref|YP_003482918.1|	-	2.1	8.3	4.8	0.54	10.2	1.1	1.6	2	0	0	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
zf-ribbon_3	PF13248.1	gi|289596222|ref|YP_003482918.1|	-	4.1	6.7	7.1	17	4.7	1.0	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF208	PF02677.9	gi|289596223|ref|YP_003482919.1|	-	3.8e-57	192.8	3.9	4.3e-57	192.7	2.7	1.0	1	0	0	1	1	1	1	Uncharacterized	BCR,	COG1636
zf-C3HC	PF07967.8	gi|289596223|ref|YP_003482919.1|	-	0.071	12.8	0.1	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	C3HC	zinc	finger-like
zf-BED	PF02892.10	gi|289596223|ref|YP_003482919.1|	-	0.41	10.4	2.9	0.64	9.8	0.2	2.3	2	0	0	2	2	2	0	BED	zinc	finger
DUF387	PF04079.11	gi|289596224|ref|YP_003482920.1|	-	2.4e-06	26.9	0.2	6e-06	25.7	0.1	1.6	1	1	1	2	2	2	1	Putative	transcriptional	regulators	(Ypuh-like)
TrmB	PF01978.14	gi|289596224|ref|YP_003482920.1|	-	0.00018	21.1	0.4	0.00042	19.9	0.1	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|289596224|ref|YP_003482920.1|	-	0.0026	17.4	0.0	0.004	16.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|289596224|ref|YP_003482920.1|	-	0.011	16.0	0.0	0.028	14.7	0.0	1.7	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
tRNA_int_endo	PF01974.12	gi|289596224|ref|YP_003482920.1|	-	0.05	13.3	0.1	0.96	9.2	0.0	2.1	2	0	0	2	2	2	0	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Med11	PF10280.4	gi|289596224|ref|YP_003482920.1|	-	0.072	13.1	0.2	2.3	8.2	0.0	2.2	2	1	0	2	2	2	0	Mediator	complex	protein
HTH_34	PF13601.1	gi|289596224|ref|YP_003482920.1|	-	0.076	13.0	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|289596224|ref|YP_003482920.1|	-	0.085	12.3	1.2	0.13	11.7	0.9	1.4	1	1	0	1	1	1	0	TFIIE	alpha	subunit
RPA_C	PF08784.6	gi|289596224|ref|YP_003482920.1|	-	0.1	13.0	0.6	4.7	7.6	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Rib_5-P_isom_A	PF06026.9	gi|289596225|ref|YP_003482921.1|	-	4.8e-67	224.6	1.0	5.9e-67	224.2	0.7	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|289596225|ref|YP_003482921.1|	-	5.7e-06	26.0	0.4	0.00048	19.8	0.0	2.2	1	1	1	2	2	2	2	DeoR	C	terminal	sensor	domain
CATSPERD	PF15020.1	gi|289596225|ref|YP_003482921.1|	-	0.022	12.7	0.0	0.028	12.4	0.0	1.1	1	0	0	1	1	1	0	Cation	channel	sperm-associated	protein	subunit	delta
Sugar-bind	PF04198.8	gi|289596225|ref|YP_003482921.1|	-	0.029	13.2	0.1	0.05	12.4	0.0	1.5	2	0	0	2	2	2	0	Putative	sugar-binding	domain
HTH_20	PF12840.2	gi|289596226|ref|YP_003482922.1|	-	1.4e-11	44.0	0.0	3.1e-10	39.7	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289596226|ref|YP_003482922.1|	-	1.6e-08	34.1	0.6	0.0017	18.0	0.0	2.7	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|289596226|ref|YP_003482922.1|	-	1.9e-07	30.6	0.4	0.00019	21.0	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_24	PF13412.1	gi|289596226|ref|YP_003482922.1|	-	8.5e-07	28.2	0.0	2.4e-05	23.6	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|289596226|ref|YP_003482922.1|	-	5.2e-05	22.8	0.6	0.0098	15.5	0.0	2.6	3	0	0	3	3	3	1	MarR	family
HTH_27	PF13463.1	gi|289596226|ref|YP_003482922.1|	-	0.0003	21.0	0.0	0.087	13.1	0.0	2.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DUF2250	PF10007.4	gi|289596226|ref|YP_003482922.1|	-	0.0021	17.9	0.0	0.032	14.1	0.0	2.2	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.7	gi|289596226|ref|YP_003482922.1|	-	0.051	13.4	0.0	0.11	12.3	0.0	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rrf2	PF02082.15	gi|289596226|ref|YP_003482922.1|	-	0.086	12.9	0.0	20	5.3	0.0	2.3	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_5	PF01022.15	gi|289596226|ref|YP_003482922.1|	-	0.1	12.2	0.0	0.21	11.2	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.1	gi|289596226|ref|YP_003482922.1|	-	0.1	12.4	0.1	23	4.8	0.1	2.5	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
KaiC	PF06745.8	gi|289596227|ref|YP_003482923.1|	-	6.6e-40	136.6	0.1	1.7e-39	135.2	0.0	1.6	1	1	1	2	2	2	1	KaiC
GvpD	PF07088.6	gi|289596227|ref|YP_003482923.1|	-	5.9e-06	24.8	0.1	3.4e-05	22.3	0.1	1.8	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_14	PF13173.1	gi|289596227|ref|YP_003482923.1|	-	1.5e-05	24.8	0.4	3e-05	23.9	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|289596227|ref|YP_003482923.1|	-	1.7e-05	24.3	0.1	3.5e-05	23.3	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|289596227|ref|YP_003482923.1|	-	0.001	18.5	0.0	0.0019	17.6	0.0	1.7	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|289596227|ref|YP_003482923.1|	-	0.0012	18.7	2.7	0.12	12.1	0.2	2.5	1	1	2	3	3	3	1	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|289596227|ref|YP_003482923.1|	-	0.0016	19.2	0.3	0.0065	17.2	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|289596227|ref|YP_003482923.1|	-	0.0018	17.4	0.1	0.0053	15.8	0.0	1.8	2	0	0	2	2	2	1	Zeta	toxin
AAA_22	PF13401.1	gi|289596227|ref|YP_003482923.1|	-	0.0023	18.0	0.0	0.011	15.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
MEDS	PF14417.1	gi|289596227|ref|YP_003482923.1|	-	0.0037	16.3	0.0	0.01	14.9	0.0	1.7	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
IstB_IS21	PF01695.12	gi|289596227|ref|YP_003482923.1|	-	0.013	14.9	0.0	0.022	14.1	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|289596227|ref|YP_003482923.1|	-	0.014	14.2	0.0	0.026	13.3	0.0	1.4	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
ABC_tran	PF00005.22	gi|289596227|ref|YP_003482923.1|	-	0.019	15.2	0.1	0.1	12.8	0.0	2.0	2	0	0	2	2	2	0	ABC	transporter
Miro	PF08477.8	gi|289596227|ref|YP_003482923.1|	-	0.026	15.0	0.0	0.068	13.6	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
RecA	PF00154.16	gi|289596227|ref|YP_003482923.1|	-	0.027	13.5	0.0	0.045	12.8	0.0	1.3	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
AAA_33	PF13671.1	gi|289596227|ref|YP_003482923.1|	-	0.027	14.3	0.0	0.048	13.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|289596227|ref|YP_003482923.1|	-	0.028	13.0	0.1	0.061	11.9	0.0	1.6	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|289596227|ref|YP_003482923.1|	-	0.037	13.4	0.0	0.083	12.3	0.0	1.6	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_24	PF13479.1	gi|289596227|ref|YP_003482923.1|	-	0.042	13.4	0.0	0.072	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|289596227|ref|YP_003482923.1|	-	0.064	12.6	0.1	0.21	10.9	0.0	1.8	1	1	1	2	2	2	0	SRP54-type	protein,	GTPase	domain
S_100	PF01023.14	gi|289596227|ref|YP_003482923.1|	-	0.065	12.5	0.9	0.25	10.6	0.0	2.3	2	0	0	2	2	2	0	S-100/ICaBP	type	calcium	binding	domain
Zot	PF05707.7	gi|289596227|ref|YP_003482923.1|	-	0.073	12.5	0.1	0.16	11.3	0.0	1.7	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_23	PF13476.1	gi|289596227|ref|YP_003482923.1|	-	0.15	12.4	6.4	0.32	11.3	2.5	2.4	2	1	0	2	2	2	0	AAA	domain
DUF4226	PF10774.4	gi|289596227|ref|YP_003482923.1|	-	0.15	12.1	0.0	8.6	6.4	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4226)
AAA_19	PF13245.1	gi|289596227|ref|YP_003482923.1|	-	0.15	11.8	0.0	0.28	10.9	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|289596227|ref|YP_003482923.1|	-	0.16	11.9	0.0	0.31	10.9	0.0	1.6	2	0	0	2	2	1	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596227|ref|YP_003482923.1|	-	0.17	11.4	1.0	0.33	10.5	0.7	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
FliL	PF03748.9	gi|289596227|ref|YP_003482923.1|	-	0.24	11.4	2.5	0.16	11.9	0.4	1.7	2	0	0	2	2	1	0	Flagellar	basal	body-associated	protein	FliL
DDE_Tnp_1	PF01609.16	gi|289596228|ref|YP_003482924.1|	-	1.7e-19	70.2	0.4	1.7e-19	70.2	0.3	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596228|ref|YP_003482924.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596228|ref|YP_003482924.1|	-	0.0013	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
Phage_GPA	PF05840.8	gi|289596228|ref|YP_003482924.1|	-	0.075	11.7	0.2	0.11	11.1	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
HTH_38	PF13936.1	gi|289596228|ref|YP_003482924.1|	-	0.092	12.3	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDE_Tnp_1_2	PF13586.1	gi|289596228|ref|YP_003482924.1|	-	0.093	12.9	2.1	0.26	11.4	0.4	2.4	2	1	0	2	2	2	0	Transposase	DDE	domain
ASFV_p27	PF06556.6	gi|289596229|ref|YP_003482925.1|	-	0.016	15.0	0.0	0.039	13.8	0.0	1.6	1	0	0	1	1	1	0	IAP-like	protein	p27	C-terminus
DUF2268	PF10026.4	gi|289596230|ref|YP_003482926.1|	-	4.5e-05	22.9	0.0	9.6e-05	21.8	0.0	1.6	1	0	0	1	1	1	1	Predicted	Zn-dependent	protease	(DUF2268)
KaiC	PF06745.8	gi|289596231|ref|YP_003482927.1|	-	7.6e-09	35.0	0.3	9.1e-07	28.2	0.2	2.5	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596231|ref|YP_003482927.1|	-	2.2e-07	30.4	0.0	5.1e-07	29.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.6	gi|289596231|ref|YP_003482927.1|	-	0.019	13.8	0.0	0.1	11.4	0.0	2.0	2	1	1	3	3	3	0	Rad51
TIP49	PF06068.8	gi|289596231|ref|YP_003482927.1|	-	0.034	12.8	0.0	0.051	12.2	0.0	1.3	1	0	0	1	1	1	0	TIP49	C-terminus
KaiC	PF06745.8	gi|289596232|ref|YP_003482928.1|	-	8.6e-62	208.2	0.3	9.7e-62	208.0	0.2	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596232|ref|YP_003482928.1|	-	4.5e-09	35.9	0.0	7.2e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|289596232|ref|YP_003482928.1|	-	3.1e-08	32.3	0.1	4.4e-08	31.8	0.1	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.16	gi|289596232|ref|YP_003482928.1|	-	6.6e-07	28.6	0.0	9.2e-07	28.2	0.0	1.4	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_14	PF13173.1	gi|289596232|ref|YP_003482928.1|	-	0.00043	20.1	0.0	0.0012	18.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.6	gi|289596232|ref|YP_003482928.1|	-	0.00089	18.2	0.1	0.0015	17.4	0.1	1.4	1	0	0	1	1	1	1	Rad51
PAXNEB	PF05625.6	gi|289596232|ref|YP_003482928.1|	-	0.0015	17.4	0.5	0.021	13.6	0.1	2.0	1	1	0	2	2	2	1	PAXNEB	protein
ATP-synt_ab	PF00006.20	gi|289596232|ref|YP_003482928.1|	-	0.0025	17.3	0.0	0.0037	16.8	0.0	1.4	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DnaB_C	PF03796.10	gi|289596232|ref|YP_003482928.1|	-	0.014	14.2	0.1	0.059	12.2	0.0	1.8	1	1	1	2	2	2	0	DnaB-like	helicase	C	terminal	domain
IstB_IS21	PF01695.12	gi|289596232|ref|YP_003482928.1|	-	0.021	14.2	0.1	0.1	12.0	0.0	1.9	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_24	PF13479.1	gi|289596232|ref|YP_003482928.1|	-	0.026	14.1	0.1	0.039	13.5	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|289596232|ref|YP_003482928.1|	-	0.03	14.0	0.0	0.061	13.0	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_35	PF14516.1	gi|289596232|ref|YP_003482928.1|	-	0.032	12.8	0.0	0.046	12.3	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
ABC_tran	PF00005.22	gi|289596232|ref|YP_003482928.1|	-	0.068	13.4	0.2	0.16	12.2	0.1	1.5	1	1	0	1	1	1	0	ABC	transporter
NACHT	PF05729.7	gi|289596232|ref|YP_003482928.1|	-	0.12	12.0	0.2	0.17	11.5	0.2	1.6	1	1	0	1	1	1	0	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|289596232|ref|YP_003482928.1|	-	0.16	11.4	0.3	0.35	10.3	0.1	1.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
zf-AD	PF07776.10	gi|289596234|ref|YP_003482930.1|	-	0.013	15.5	0.3	0.02	14.8	0.2	1.5	1	1	0	1	1	1	0	Zinc-finger	associated	domain	(zf-AD)
zf-C2H2_2	PF12756.2	gi|289596234|ref|YP_003482930.1|	-	0.014	15.4	0.5	1.7	8.7	0.0	2.2	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
DUF4428	PF14471.1	gi|289596234|ref|YP_003482930.1|	-	0.031	14.0	1.6	0.065	12.9	1.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
DUF1283	PF06932.6	gi|289596234|ref|YP_003482930.1|	-	0.038	13.9	0.1	0.06	13.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1283)
Fis1_TPR_C	PF14853.1	gi|289596234|ref|YP_003482930.1|	-	0.053	13.4	0.6	0.095	12.6	0.4	1.4	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
Cas_CXXC_CXXC	PF09706.5	gi|289596234|ref|YP_003482930.1|	-	0.084	13.0	0.8	3.7	7.8	0.1	2.4	1	1	1	2	2	2	0	CRISPR-associated	protein	(Cas_CXXC_CXXC)
NAP	PF00956.13	gi|289596235|ref|YP_003482931.1|	-	0.35	9.9	8.1	0.38	9.8	3.1	2.0	2	0	0	2	2	2	0	Nucleosome	assembly	protein	(NAP)
Yip1	PF04893.12	gi|289596236|ref|YP_003482932.1|	-	0.0087	15.5	11.9	0.013	15.0	8.2	1.2	1	0	0	1	1	1	1	Yip1	domain
YrhC	PF14143.1	gi|289596236|ref|YP_003482932.1|	-	1.7	8.6	5.9	0.74	9.7	1.2	2.2	1	1	0	2	2	2	0	YrhC-like	protein
Tetraspannin	PF00335.15	gi|289596236|ref|YP_003482932.1|	-	7.5	5.7	12.2	11	5.1	8.4	1.3	1	0	0	1	1	1	0	Tetraspanin	family
TctA	PF01970.11	gi|289596237|ref|YP_003482933.1|	-	2.5e-59	200.7	44.6	2.8e-59	200.5	30.9	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
PKD	PF00801.15	gi|289596238|ref|YP_003482934.1|	-	2.1e-16	59.3	18.6	2.7e-08	33.4	0.1	5.1	5	0	0	5	5	5	4	PKD	domain
CarboxypepD_reg	PF13620.1	gi|289596238|ref|YP_003482934.1|	-	7.8e-10	38.6	7.8	6.8e-05	22.8	0.0	5.4	5	0	0	5	5	5	2	Carboxypeptidase	regulatory-like	domain
CARDB	PF07705.6	gi|289596238|ref|YP_003482934.1|	-	2e-09	37.3	1.5	2e-09	37.3	1.0	4.7	4	1	0	4	4	4	2	CARDB
Big_3_4	PF13754.1	gi|289596238|ref|YP_003482934.1|	-	2.5e-05	24.5	21.5	0.00072	19.8	1.4	6.1	6	0	0	6	6	6	3	Bacterial	Ig-like	domain	(group	3)
tRNA-synt_1d	PF00750.14	gi|289596239|ref|YP_003482935.1|	-	1.4e-55	188.5	2.8	2e-55	188.0	1.9	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|289596239|ref|YP_003482935.1|	-	1.8e-33	115.0	1.8	3.3e-33	114.1	0.1	2.3	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|289596239|ref|YP_003482935.1|	-	5e-17	62.2	0.6	2.4e-15	56.8	0.2	3.4	2	1	1	3	3	3	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.13	gi|289596239|ref|YP_003482935.1|	-	4.3e-07	28.9	0.1	0.0046	15.6	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.14	gi|289596239|ref|YP_003482935.1|	-	0.0016	17.6	0.2	0.021	13.9	0.0	2.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|289596239|ref|YP_003482935.1|	-	0.007	15.0	0.1	4.2	5.9	0.0	3.3	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1b	PF00579.20	gi|289596239|ref|YP_003482935.1|	-	0.007	15.5	0.0	0.12	11.5	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(W	and	Y)
Ribosomal_S27	PF01599.14	gi|289596241|ref|YP_003482937.1|	-	4.4e-22	77.6	4.0	4.8e-22	77.5	2.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27a
DZR	PF12773.2	gi|289596241|ref|YP_003482937.1|	-	0.00015	21.4	0.7	0.00018	21.2	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
GFA	PF04828.9	gi|289596241|ref|YP_003482937.1|	-	0.0017	18.2	1.6	0.016	15.1	0.0	2.0	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
A2L_zn_ribbon	PF08792.5	gi|289596241|ref|YP_003482937.1|	-	0.0031	16.9	4.0	0.069	12.6	0.2	2.2	1	1	1	2	2	2	1	A2L	zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|289596241|ref|YP_003482937.1|	-	0.0046	16.1	3.2	0.072	12.3	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596241|ref|YP_003482937.1|	-	0.0078	15.6	3.5	0.24	10.9	0.3	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|289596241|ref|YP_003482937.1|	-	0.017	14.7	7.1	0.19	11.4	4.5	2.1	1	1	1	2	2	2	0	Nudix	N-terminal
DUF2082	PF09855.4	gi|289596241|ref|YP_003482937.1|	-	0.025	14.4	5.1	0.16	11.8	0.7	2.3	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
IBR	PF01485.16	gi|289596241|ref|YP_003482937.1|	-	0.033	14.0	0.4	0.033	14.0	0.3	1.1	1	0	0	1	1	1	0	IBR	domain
HypA	PF01155.14	gi|289596241|ref|YP_003482937.1|	-	0.049	13.3	0.5	0.053	13.2	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|289596241|ref|YP_003482937.1|	-	0.06	13.1	4.8	0.11	12.3	3.1	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|289596241|ref|YP_003482937.1|	-	0.064	12.7	7.9	0.29	10.6	5.5	1.9	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|289596241|ref|YP_003482937.1|	-	0.065	13.0	2.8	0.084	12.6	1.9	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L37e
RNA_POL_M_15KD	PF02150.11	gi|289596241|ref|YP_003482937.1|	-	0.072	12.7	7.1	0.36	10.5	4.9	2.0	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Tnp_zf-ribbon_2	PF13842.1	gi|289596241|ref|YP_003482937.1|	-	0.078	13.4	1.5	3.9	7.9	0.1	2.1	2	0	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
C1_1	PF00130.17	gi|289596241|ref|YP_003482937.1|	-	0.12	12.1	0.7	0.13	12.0	0.5	1.1	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
OrfB_Zn_ribbon	PF07282.6	gi|289596241|ref|YP_003482937.1|	-	0.13	11.9	1.3	0.16	11.6	0.9	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.9	gi|289596241|ref|YP_003482937.1|	-	0.18	11.5	6.6	1.7	8.3	0.8	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Lar_restr_allev	PF14354.1	gi|289596241|ref|YP_003482937.1|	-	0.19	12.0	2.6	0.23	11.7	1.8	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF1936	PF09151.5	gi|289596241|ref|YP_003482937.1|	-	0.25	10.8	7.2	4.2	6.9	5.0	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1936)
NOB1_Zn_bind	PF08772.6	gi|289596241|ref|YP_003482937.1|	-	0.36	10.6	6.7	0.37	10.6	0.9	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
TF_Zn_Ribbon	PF08271.7	gi|289596241|ref|YP_003482937.1|	-	0.5	9.7	5.0	1.1	8.6	3.5	1.6	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|289596241|ref|YP_003482937.1|	-	0.67	10.1	6.7	8.8	6.5	1.2	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-HYPF	PF07503.7	gi|289596241|ref|YP_003482937.1|	-	0.83	9.1	5.3	1.1	8.7	0.2	2.6	3	0	0	3	3	3	0	HypF	finger
FeS	PF04060.8	gi|289596241|ref|YP_003482937.1|	-	1.2	8.7	4.6	0.5	9.9	0.6	2.0	2	0	0	2	2	2	0	Putative	Fe-S	cluster
Auto_anti-p27	PF06677.7	gi|289596241|ref|YP_003482937.1|	-	2.4	7.9	6.4	7.9	6.3	3.4	2.3	1	1	2	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C2H2	PF00096.21	gi|289596241|ref|YP_003482937.1|	-	3.6	8.1	6.0	11	6.6	1.1	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Zn-ribbon_8	PF09723.5	gi|289596241|ref|YP_003482937.1|	-	4.7	7.2	7.6	11	6.1	0.7	2.2	1	1	0	2	2	2	0	Zinc	ribbon	domain
Ribosomal_S24e	PF01282.14	gi|289596242|ref|YP_003482938.1|	-	3.4e-32	110.0	0.2	4e-32	109.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DUF359	PF04019.7	gi|289596243|ref|YP_003482939.1|	-	4.4e-37	126.1	0.6	5.9e-37	125.7	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
XH	PF03469.9	gi|289596243|ref|YP_003482939.1|	-	0.022	14.4	0.1	0.04	13.5	0.1	1.5	1	1	0	1	1	1	0	XH	domain
LacI	PF00356.16	gi|289596243|ref|YP_003482939.1|	-	0.044	13.3	0.2	1.6	8.4	0.0	2.9	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
DUF2670	PF10875.3	gi|289596243|ref|YP_003482939.1|	-	0.073	13.1	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2670)
CAP18_C	PF12153.3	gi|289596243|ref|YP_003482939.1|	-	4.1	7.1	7.4	0.42	10.2	1.2	2.1	2	0	0	2	2	2	0	LPS	binding	domain	of	CAP18	(C	terminal)
Spt4	PF06093.8	gi|289596244|ref|YP_003482940.1|	-	8.2e-11	41.6	1.7	1.6e-10	40.7	1.2	1.5	1	1	0	1	1	1	1	Spt4/RpoE2	zinc	finger
RecR	PF02132.10	gi|289596244|ref|YP_003482940.1|	-	4.4e-05	22.8	1.5	6.3e-05	22.3	1.0	1.3	1	0	0	1	1	1	1	RecR	protein
Nop10p	PF04135.7	gi|289596244|ref|YP_003482940.1|	-	8.7e-05	22.1	1.4	0.00016	21.3	1.0	1.4	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.6	gi|289596244|ref|YP_003482940.1|	-	0.0031	17.3	2.2	0.0045	16.7	1.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
PolC_DP2	PF03833.8	gi|289596244|ref|YP_003482940.1|	-	0.0082	13.8	0.2	0.0082	13.8	0.1	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
NOB1_Zn_bind	PF08772.6	gi|289596244|ref|YP_003482940.1|	-	0.022	14.5	0.3	0.026	14.3	0.2	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|289596244|ref|YP_003482940.1|	-	0.044	13.6	1.1	0.067	13.0	0.8	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
NRDD	PF13597.1	gi|289596244|ref|YP_003482940.1|	-	0.15	10.1	0.6	0.16	10.0	0.4	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
PADR1	PF08063.7	gi|289596244|ref|YP_003482940.1|	-	0.19	11.1	3.1	1.1	8.7	2.2	1.9	1	1	0	1	1	1	0	PADR1	(NUC008)	domain
GATA	PF00320.22	gi|289596244|ref|YP_003482940.1|	-	1.9	7.8	7.5	3.9	6.8	1.1	2.2	2	0	0	2	2	2	0	GATA	zinc	finger
zf-FPG_IleRS	PF06827.9	gi|289596244|ref|YP_003482940.1|	-	3.4	7.3	6.9	8.7	6.0	0.2	2.1	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
S1	PF00575.18	gi|289596245|ref|YP_003482941.1|	-	8.6e-12	44.9	0.5	2.1e-11	43.7	0.3	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
SHS2_Rpb7-N	PF03876.12	gi|289596245|ref|YP_003482941.1|	-	2.4e-11	43.5	0.0	7.7e-11	41.9	0.0	1.9	1	1	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
HAD_2	PF13419.1	gi|289596246|ref|YP_003482942.1|	-	2.2e-19	70.3	0.1	2.9e-19	69.9	0.1	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|289596246|ref|YP_003482942.1|	-	2.4e-09	36.7	0.0	4.1e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|289596246|ref|YP_003482942.1|	-	3.3e-06	27.4	0.2	4.8e-06	26.8	0.2	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|289596246|ref|YP_003482942.1|	-	3.3e-06	27.6	0.0	0.00026	21.4	0.0	2.2	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.9	gi|289596246|ref|YP_003482942.1|	-	1.9e-05	24.1	0.7	0.0037	16.6	0.5	2.2	1	1	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Hydrolase_6	PF13344.1	gi|289596246|ref|YP_003482942.1|	-	6.9e-05	22.6	0.0	0.00024	20.9	0.0	2.0	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|289596246|ref|YP_003482942.1|	-	0.00016	21.3	0.0	0.0006	19.4	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Radical_SAM	PF04055.16	gi|289596246|ref|YP_003482942.1|	-	0.0043	17.2	0.2	0.0094	16.1	0.1	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
PPR	PF01535.15	gi|289596246|ref|YP_003482942.1|	-	0.0054	16.6	0.8	1.9	8.6	0.0	2.8	3	0	0	3	3	2	1	PPR	repeat
DUF269	PF03270.8	gi|289596246|ref|YP_003482942.1|	-	0.0087	16.0	0.0	2.4	8.1	0.0	3.0	3	0	0	3	3	3	1	Protein	of	unknown	function,	DUF269
Acid_PPase	PF12689.2	gi|289596246|ref|YP_003482942.1|	-	0.03	13.9	0.1	3.5	7.2	0.0	2.3	2	1	0	2	2	2	0	Acid	Phosphatase
NIF	PF03031.13	gi|289596246|ref|YP_003482942.1|	-	0.088	12.4	0.6	0.48	10.0	0.4	2.1	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
ADH_zinc_N	PF00107.21	gi|289596246|ref|YP_003482942.1|	-	0.13	11.7	0.1	12	5.4	0.0	2.2	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
TGT	PF01702.13	gi|289596247|ref|YP_003482943.1|	-	6.3e-45	153.3	0.0	8.9e-45	152.8	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
TGT_C2	PF14810.1	gi|289596247|ref|YP_003482943.1|	-	4.7e-29	100.0	0.1	1e-28	98.9	0.1	1.6	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|289596247|ref|YP_003482943.1|	-	3.9e-18	64.9	0.1	1.3e-17	63.2	0.1	2.0	1	0	0	1	1	1	1	PUA	domain
TGT_C1	PF14809.1	gi|289596247|ref|YP_003482943.1|	-	0.00067	19.4	0.1	0.85	9.4	0.0	2.8	2	0	0	2	2	2	2	C1	domain	of	tRNA-guanine	transglycosylase	dimerisation
Ras	PF00071.17	gi|289596248|ref|YP_003482944.1|	-	3.5e-20	72.0	0.1	4.1e-20	71.8	0.1	1.1	1	0	0	1	1	1	1	Ras	family
Miro	PF08477.8	gi|289596248|ref|YP_003482944.1|	-	2.3e-13	50.6	0.1	3.5e-13	50.1	0.1	1.3	1	0	0	1	1	1	1	Miro-like	protein
Arf	PF00025.16	gi|289596248|ref|YP_003482944.1|	-	0.00095	18.4	0.0	0.0013	18.0	0.0	1.3	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
GTP_EFTU	PF00009.22	gi|289596248|ref|YP_003482944.1|	-	0.0031	16.9	0.0	2.4	7.5	0.0	2.3	1	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
MMR_HSR1	PF01926.18	gi|289596248|ref|YP_003482944.1|	-	0.017	15.0	0.0	0.055	13.4	0.0	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|289596248|ref|YP_003482944.1|	-	0.038	13.9	0.0	0.047	13.6	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
PduV-EutP	PF10662.4	gi|289596248|ref|YP_003482944.1|	-	0.046	13.2	0.1	12	5.3	0.0	2.8	1	1	2	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_24	PF13479.1	gi|289596248|ref|YP_003482944.1|	-	0.079	12.5	0.0	0.66	9.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|289596248|ref|YP_003482944.1|	-	0.089	12.9	0.1	0.26	11.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|289596248|ref|YP_003482944.1|	-	0.096	12.3	0.0	0.24	11.0	0.0	1.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF592	PF04574.8	gi|289596248|ref|YP_003482944.1|	-	0.11	12.0	0.0	0.27	10.7	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF592)
tRNA_int_endo	PF01974.12	gi|289596249|ref|YP_003482945.1|	-	1.1e-27	95.6	6.1	7e-23	80.2	0.5	2.8	2	1	0	2	2	2	2	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|289596249|ref|YP_003482945.1|	-	9.6e-10	37.8	0.8	8.2e-06	25.2	0.0	3.0	3	0	0	3	3	3	2	tRNA	intron	endonuclease,	N-terminal	domain
YozD	PF14162.1	gi|289596249|ref|YP_003482945.1|	-	0.022	14.8	0.4	2.1	8.5	0.0	3.0	3	0	0	3	3	3	0	YozD-like	protein
tRNA_anti-codon	PF01336.20	gi|289596250|ref|YP_003482946.1|	-	5.5e-17	61.3	14.3	7.4e-05	22.5	0.0	9.1	9	0	0	9	9	9	5	OB-fold	nucleic	acid	binding	domain
PKD	PF00801.15	gi|289596250|ref|YP_003482946.1|	-	2e-15	56.3	0.1	8.1e-15	54.3	0.1	2.1	1	0	0	1	1	1	1	PKD	domain
DUF1344	PF07076.6	gi|289596250|ref|YP_003482946.1|	-	0.016	14.7	0.3	0.045	13.3	0.2	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1344)
GIDE	PF12483.3	gi|289596250|ref|YP_003482946.1|	-	0.046	13.0	0.0	0.42	9.9	0.0	2.6	2	1	1	3	3	3	0	E3	Ubiquitin	ligase
BOF	PF04076.8	gi|289596250|ref|YP_003482946.1|	-	0.15	11.8	7.1	5.7	6.8	0.0	4.1	6	0	0	6	6	6	0	Bacterial	OB	fold	(BOF)	protein
zf-ribbon_3	PF13248.1	gi|289596251|ref|YP_003482947.1|	-	3.1e-07	29.3	2.1	5e-07	28.7	1.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
tRNA_anti-codon	PF01336.20	gi|289596251|ref|YP_003482947.1|	-	1.2e-06	28.2	0.2	0.0003	20.5	0.0	2.2	2	0	0	2	2	2	2	OB-fold	nucleic	acid	binding	domain
zinc_ribbon_2	PF13240.1	gi|289596251|ref|YP_003482947.1|	-	0.00023	20.5	3.1	0.19	11.2	0.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|289596251|ref|YP_003482947.1|	-	0.0015	18.2	0.5	0.0026	17.5	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-LITAF-like	PF10601.4	gi|289596251|ref|YP_003482947.1|	-	0.014	15.2	1.4	4.1	7.3	0.1	2.4	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
Sgf11	PF08209.6	gi|289596251|ref|YP_003482947.1|	-	0.089	12.1	1.4	0.39	10.0	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-ISL3	PF14690.1	gi|289596251|ref|YP_003482947.1|	-	0.26	11.3	4.2	3.1	7.9	0.2	2.5	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
UPF0547	PF10571.4	gi|289596251|ref|YP_003482947.1|	-	0.26	10.9	5.3	4.1	7.1	3.7	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|289596251|ref|YP_003482947.1|	-	5.6	6.3	7.1	65	2.9	4.9	2.4	1	1	0	1	1	1	0	TFIIB	zinc-binding
tRNA_anti-codon	PF01336.20	gi|289596252|ref|YP_003482948.1|	-	1.3e-07	31.3	4.1	0.084	12.7	0.0	4.7	4	3	0	4	4	4	3	OB-fold	nucleic	acid	binding	domain
zinc_ribbon_2	PF13240.1	gi|289596252|ref|YP_003482948.1|	-	1e-05	24.8	1.0	1.8e-05	24.0	0.7	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|289596252|ref|YP_003482948.1|	-	2.6e-05	23.2	0.7	4.1e-05	22.6	0.5	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|289596252|ref|YP_003482948.1|	-	0.00017	21.3	0.5	0.00028	20.6	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|289596252|ref|YP_003482948.1|	-	0.015	15.0	2.6	0.027	14.1	1.8	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Prok-RING_1	PF14446.1	gi|289596252|ref|YP_003482948.1|	-	0.23	11.2	1.7	0.36	10.5	1.2	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
TctA	PF01970.11	gi|289596253|ref|YP_003482949.1|	-	7.1e-40	136.6	42.8	8.7e-40	136.3	29.7	1.1	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
DUF457	PF04307.9	gi|289596254|ref|YP_003482950.1|	-	1.9e-11	43.5	11.8	7.1e-11	41.6	8.2	1.9	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Amidase_3	PF01520.13	gi|289596254|ref|YP_003482950.1|	-	0.14	11.9	0.0	0.2	11.4	0.0	1.2	1	0	0	1	1	1	0	N-acetylmuramoyl-L-alanine	amidase
Atx10homo_assoc	PF09759.4	gi|289596254|ref|YP_003482950.1|	-	0.44	10.2	2.1	8.3	6.2	0.1	2.8	3	0	0	3	3	3	0	Spinocerebellar	ataxia	type	10	protein	domain
FAD_binding_3	PF01494.14	gi|289596255|ref|YP_003482951.1|	-	5.5e-21	75.0	0.0	1.5e-19	70.2	0.0	2.1	1	1	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|289596255|ref|YP_003482951.1|	-	3.4e-15	56.0	0.3	8.9e-15	54.6	0.3	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|289596255|ref|YP_003482951.1|	-	4.6e-13	48.7	0.5	8.4e-08	31.4	0.0	2.3	1	1	1	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|289596255|ref|YP_003482951.1|	-	5.2e-12	45.3	0.4	4.1e-07	29.2	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|289596255|ref|YP_003482951.1|	-	3.6e-10	39.0	0.1	1e-05	24.4	0.0	2.1	1	1	1	2	2	2	2	Tryptophan	halogenase
Pyr_redox_2	PF07992.9	gi|289596255|ref|YP_003482951.1|	-	8.3e-10	38.8	0.6	1.9e-09	37.6	0.3	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|289596255|ref|YP_003482951.1|	-	8e-09	34.8	0.0	3.8e-07	29.3	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_8	PF13450.1	gi|289596255|ref|YP_003482951.1|	-	1.3e-07	31.5	0.1	3.7e-07	30.0	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|289596255|ref|YP_003482951.1|	-	1.5e-07	30.2	0.9	3.7e-07	28.9	0.1	1.9	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.17	gi|289596255|ref|YP_003482951.1|	-	1e-06	27.9	0.0	2.6e-06	26.5	0.0	1.7	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.12	gi|289596255|ref|YP_003482951.1|	-	1.9e-06	27.1	0.1	7.9e-06	25.1	0.0	2.0	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|289596255|ref|YP_003482951.1|	-	0.00011	22.5	0.0	0.0008	19.7	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596255|ref|YP_003482951.1|	-	0.001	19.2	0.1	0.0044	17.0	0.0	2.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|289596255|ref|YP_003482951.1|	-	0.0023	17.6	0.1	0.062	12.9	0.0	2.5	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
SE	PF08491.5	gi|289596255|ref|YP_003482951.1|	-	0.04	12.7	0.3	0.14	10.9	0.0	2.0	2	1	0	2	2	2	0	Squalene	epoxidase
Myosin_N	PF02736.14	gi|289596255|ref|YP_003482951.1|	-	0.048	13.3	2.3	0.35	10.5	0.2	2.7	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
H-K_ATPase_N	PF09040.6	gi|289596255|ref|YP_003482951.1|	-	0.061	13.4	0.1	0.18	11.9	0.1	1.8	1	0	0	1	1	1	0	Gastric	H+/K+-ATPase,	N	terminal	domain
MSP	PF01716.13	gi|289596255|ref|YP_003482951.1|	-	0.13	11.3	0.0	0.46	9.5	0.0	1.8	2	0	0	2	2	2	0	Manganese-stabilising	protein	/	photosystem	II	polypeptide
Fer4	PF00037.22	gi|289596256|ref|YP_003482952.1|	-	1.7e-16	59.0	20.3	6.3e-11	41.3	3.2	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596256|ref|YP_003482952.1|	-	7.9e-15	54.9	41.3	4.1e-09	36.6	10.9	1.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596256|ref|YP_003482952.1|	-	2.8e-12	45.9	21.2	1.2e-09	37.5	3.7	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289596256|ref|YP_003482952.1|	-	1.1e-10	40.7	15.9	3.6e-07	29.7	2.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596256|ref|YP_003482952.1|	-	1.5e-09	37.5	11.9	7.2e-07	28.9	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596256|ref|YP_003482952.1|	-	6e-08	32.8	31.2	6.1e-07	29.5	11.5	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596256|ref|YP_003482952.1|	-	7.1e-08	33.0	10.7	9.4e-05	23.0	0.9	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_11	PF13247.1	gi|289596256|ref|YP_003482952.1|	-	2.1e-06	27.5	6.1	2.3e-06	27.4	4.2	1.0	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596256|ref|YP_003482952.1|	-	3.5e-06	26.7	16.1	2.8e-05	23.8	1.9	1.9	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596256|ref|YP_003482952.1|	-	2.2e-05	24.3	26.7	0.0012	18.7	1.5	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289596256|ref|YP_003482952.1|	-	2.9e-05	24.3	10.9	0.003	17.8	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596256|ref|YP_003482952.1|	-	0.00014	21.9	17.7	0.0029	17.7	2.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|289596256|ref|YP_003482952.1|	-	0.0011	19.3	24.0	0.0089	16.5	3.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289596256|ref|YP_003482952.1|	-	0.0014	19.1	19.1	0.068	13.7	4.1	3.2	2	2	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289596256|ref|YP_003482952.1|	-	0.011	16.1	18.1	0.029	14.7	3.8	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|289596256|ref|YP_003482952.1|	-	0.015	15.6	3.7	0.015	15.6	2.5	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
zf-CHCC	PF10276.4	gi|289596256|ref|YP_003482952.1|	-	0.12	12.2	4.3	0.7	9.7	0.3	2.4	2	0	0	2	2	2	0	Zinc-finger	domain
Stig1	PF04885.8	gi|289596256|ref|YP_003482952.1|	-	0.68	10.1	8.9	0.78	9.9	6.2	1.1	1	0	0	1	1	1	0	Stigma-specific	protein,	Stig1
Radical_SAM	PF04055.16	gi|289596257|ref|YP_003482953.1|	-	5.4e-17	62.4	0.0	8.9e-17	61.7	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596257|ref|YP_003482953.1|	-	3.9e-07	30.0	0.0	8.5e-07	29.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|289596257|ref|YP_003482953.1|	-	3e-06	27.4	0.0	6.3e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Corona_NS2A	PF05213.7	gi|289596258|ref|YP_003482954.1|	-	0.016	14.5	0.1	0.026	13.8	0.1	1.3	1	0	0	1	1	1	0	Coronavirus	NS2A	protein
HTH_24	PF13412.1	gi|289596260|ref|YP_003482956.1|	-	1.6e-18	65.8	1.2	1.3e-09	37.3	0.1	3.1	2	1	1	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|289596260|ref|YP_003482956.1|	-	1.8e-11	43.5	0.1	5.9e-07	29.0	0.0	2.5	2	1	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|289596260|ref|YP_003482956.1|	-	1.1e-09	37.8	0.9	0.00026	20.6	0.3	2.2	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|289596260|ref|YP_003482956.1|	-	2.9e-09	36.5	0.0	0.00032	20.4	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|289596260|ref|YP_003482956.1|	-	1.5e-07	30.9	0.0	0.00027	20.5	0.0	2.2	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.17	gi|289596260|ref|YP_003482956.1|	-	9.6e-07	28.4	0.0	0.00019	21.0	0.0	2.3	2	0	0	2	2	2	1	MarR	family
FeoC	PF09012.5	gi|289596260|ref|YP_003482956.1|	-	3.7e-06	26.5	0.0	0.072	12.8	0.0	2.2	2	0	0	2	2	2	2	FeoC	like	transcriptional	regulator
HTH_34	PF13601.1	gi|289596260|ref|YP_003482956.1|	-	2.5e-05	24.2	0.0	0.26	11.3	0.1	2.2	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|289596260|ref|YP_003482956.1|	-	0.00012	22.2	0.0	0.0038	17.5	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|289596260|ref|YP_003482956.1|	-	0.00013	21.7	2.2	0.0017	18.1	0.3	2.7	2	1	0	2	2	2	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.11	gi|289596260|ref|YP_003482956.1|	-	0.00029	20.9	0.1	0.0013	18.8	0.1	2.0	1	1	1	2	2	2	1	Penicillinase	repressor
Fe_dep_repress	PF01325.14	gi|289596260|ref|YP_003482956.1|	-	0.00045	20.0	0.0	0.00088	19.1	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|289596260|ref|YP_003482956.1|	-	0.00068	19.1	0.0	0.012	15.1	0.0	2.2	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
DUF4423	PF14394.1	gi|289596260|ref|YP_003482956.1|	-	0.003	17.1	0.0	1.2	8.6	0.0	2.1	1	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
PCI	PF01399.22	gi|289596260|ref|YP_003482956.1|	-	0.0032	17.7	0.3	1.8	8.9	0.0	2.2	1	1	1	2	2	2	1	PCI	domain
YwpF	PF14183.1	gi|289596260|ref|YP_003482956.1|	-	0.0043	16.7	0.0	0.0095	15.6	0.0	1.7	1	1	0	1	1	1	1	YwpF-like	protein
DUF2513	PF10711.4	gi|289596260|ref|YP_003482956.1|	-	0.0057	16.7	0.2	1	9.4	0.0	2.2	2	0	0	2	2	2	1	Hypothetical	protein	(DUF2513)
RPA_C	PF08784.6	gi|289596260|ref|YP_003482956.1|	-	0.0065	16.8	0.0	0.14	12.5	0.0	2.2	1	1	1	2	2	2	1	Replication	protein	A	C	terminal
Rrf2	PF02082.15	gi|289596260|ref|YP_003482956.1|	-	0.017	15.2	0.0	0.24	11.5	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|289596260|ref|YP_003482956.1|	-	0.019	14.7	0.0	0.074	12.8	0.0	1.9	2	1	0	2	2	2	0	Crp-like	helix-turn-helix	domain
RP-C	PF03428.8	gi|289596260|ref|YP_003482956.1|	-	0.021	14.2	0.0	0.51	9.7	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	C	N-terminal	domain
B-block_TFIIIC	PF04182.7	gi|289596260|ref|YP_003482956.1|	-	0.028	14.2	0.2	7.2	6.5	0.1	2.3	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
HTH_23	PF13384.1	gi|289596260|ref|YP_003482956.1|	-	0.033	13.8	0.0	0.072	12.7	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_11	PF08279.7	gi|289596260|ref|YP_003482956.1|	-	0.034	13.7	0.1	0.11	12.1	0.0	1.9	1	1	1	2	2	2	0	HTH	domain
HTH_DeoR	PF08220.7	gi|289596260|ref|YP_003482956.1|	-	0.037	13.5	0.0	0.07	12.6	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
RepL	PF05732.6	gi|289596260|ref|YP_003482956.1|	-	0.042	13.0	0.7	0.081	12.1	0.5	1.6	1	1	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_Mga	PF08280.6	gi|289596260|ref|YP_003482956.1|	-	0.047	13.4	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_10	PF04967.7	gi|289596260|ref|YP_003482956.1|	-	0.057	13.0	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_36	PF13730.1	gi|289596260|ref|YP_003482956.1|	-	0.068	13.3	0.0	0.15	12.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
EAP30	PF04157.11	gi|289596260|ref|YP_003482956.1|	-	0.085	12.0	0.0	7.3	5.6	0.0	2.1	2	0	0	2	2	2	0	EAP30/Vps36	family
FaeA	PF04703.7	gi|289596260|ref|YP_003482956.1|	-	0.086	13.0	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	FaeA-like	protein
Phage_rep_O	PF04492.8	gi|289596260|ref|YP_003482956.1|	-	0.12	12.5	0.3	0.43	10.8	0.0	1.9	1	1	1	2	2	2	0	Bacteriophage	replication	protein	O
Ost4	PF10215.4	gi|289596261|ref|YP_003482957.1|	-	0.001	18.5	1.3	0.001	18.5	0.9	2.5	2	0	0	2	2	2	1	Oligosaccaryltransferase
DUF4006	PF13179.1	gi|289596261|ref|YP_003482957.1|	-	0.0048	16.4	2.3	0.0048	16.4	1.6	2.0	2	1	0	2	2	2	1	Family	of	unknown	function	(DUF4006)
DUF4293	PF14126.1	gi|289596261|ref|YP_003482957.1|	-	0.076	12.9	11.9	0.088	12.7	8.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4293)
Oxidored_q4	PF00507.14	gi|289596261|ref|YP_003482957.1|	-	1.1	9.1	9.5	0.17	11.6	3.4	1.9	1	1	1	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
UPF0014	PF03649.8	gi|289596261|ref|YP_003482957.1|	-	1.2	8.1	11.0	0.17	11.0	4.3	1.6	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0014)
COX15-CtaA	PF02628.10	gi|289596261|ref|YP_003482957.1|	-	1.4	7.7	7.1	1.6	7.5	4.9	1.1	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
DUF3043	PF11241.3	gi|289596261|ref|YP_003482957.1|	-	2.1	7.8	5.0	2.6	7.5	3.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
Aminotran_1_2	PF00155.16	gi|289596262|ref|YP_003482958.1|	-	4.3e-71	239.7	0.0	4.9e-71	239.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|289596262|ref|YP_003482958.1|	-	1.8e-06	26.9	0.0	0.0013	17.5	0.0	2.1	2	0	0	2	2	2	2	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|289596262|ref|YP_003482958.1|	-	4.5e-05	22.6	0.4	7.5e-05	21.9	0.0	1.5	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|289596262|ref|YP_003482958.1|	-	0.00015	20.1	0.0	0.00023	19.5	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
ACT	PF01842.20	gi|289596262|ref|YP_003482958.1|	-	0.028	13.8	0.0	2.1	7.8	0.0	2.6	2	0	0	2	2	2	0	ACT	domain
zf-ribbon_3	PF13248.1	gi|289596263|ref|YP_003482959.1|	-	2.3e-17	61.6	12.9	3.2e-09	35.6	2.6	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596263|ref|YP_003482959.1|	-	3e-13	48.7	13.4	1.3e-07	30.8	3.1	2.6	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|289596263|ref|YP_003482959.1|	-	8.6e-12	44.6	9.6	1.7e-11	43.7	6.6	1.5	1	1	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|289596263|ref|YP_003482959.1|	-	2.8e-08	33.2	12.8	8.5e-06	25.3	1.0	2.4	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
PolC_DP2	PF03833.8	gi|289596263|ref|YP_003482959.1|	-	0.0014	16.4	4.2	0.0014	16.4	2.9	1.8	2	0	0	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
Nudix_N_2	PF14803.1	gi|289596263|ref|YP_003482959.1|	-	0.0055	16.3	12.3	9.1	6.0	0.2	4.3	4	0	0	4	4	4	0	Nudix	N-terminal
zinc-ribbons_6	PF07191.7	gi|289596263|ref|YP_003482959.1|	-	0.006	16.3	7.3	0.022	14.5	5.0	2.0	1	1	0	1	1	1	1	zinc-ribbons
Cript	PF10235.4	gi|289596263|ref|YP_003482959.1|	-	0.0074	16.6	10.0	0.5	10.7	2.4	2.9	1	1	1	2	2	2	2	Microtubule-associated	protein	CRIPT
DUF3692	PF12469.3	gi|289596263|ref|YP_003482959.1|	-	0.015	15.5	0.2	0.034	14.3	0.1	1.5	1	0	0	1	1	1	0	CRISPR-associated	protein
DUF4398	PF14346.1	gi|289596263|ref|YP_003482959.1|	-	0.016	15.2	5.5	0.81	9.7	0.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
DNA_RNApol_7kD	PF03604.8	gi|289596263|ref|YP_003482959.1|	-	0.038	13.4	13.0	0.17	11.3	3.4	3.3	2	1	1	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.7	gi|289596263|ref|YP_003482959.1|	-	0.042	13.1	15.2	0.27	10.6	0.3	3.6	2	2	0	3	3	3	0	TFIIB	zinc-binding
Clathrin_H_link	PF13838.1	gi|289596263|ref|YP_003482959.1|	-	0.067	13.0	0.3	0.23	11.3	0.0	1.9	2	0	0	2	2	2	0	Clathrin-H-link
DUF2561	PF10812.3	gi|289596263|ref|YP_003482959.1|	-	0.071	12.7	0.0	0.095	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2561)
Hema_stalk	PF08720.5	gi|289596263|ref|YP_003482959.1|	-	0.088	12.3	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	Influenza	C	hemagglutinin	stalk
TraB	PF01963.12	gi|289596263|ref|YP_003482959.1|	-	0.09	12.2	0.6	0.14	11.6	0.4	1.4	1	0	0	1	1	1	0	TraB	family
DUF357	PF04010.8	gi|289596263|ref|YP_003482959.1|	-	0.09	12.4	1.2	0.2	11.3	0.0	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF357)
TPR_2	PF07719.12	gi|289596263|ref|YP_003482959.1|	-	0.15	12.0	1.5	0.18	11.7	0.1	1.9	2	0	0	2	2	1	0	Tetratricopeptide	repeat
Ribosomal_L32p	PF01783.18	gi|289596263|ref|YP_003482959.1|	-	0.15	12.2	7.9	1.4	9.1	1.7	2.7	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
TPR_11	PF13414.1	gi|289596263|ref|YP_003482959.1|	-	0.25	10.9	2.5	0.41	10.3	0.3	2.2	2	0	0	2	2	2	0	TPR	repeat
DUF2248	PF10005.4	gi|289596263|ref|YP_003482959.1|	-	0.52	9.1	7.0	1.8	7.3	0.5	2.6	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2248)
zf-DHHC	PF01529.15	gi|289596263|ref|YP_003482959.1|	-	0.57	9.5	9.5	0.21	10.9	0.4	3.0	2	1	1	3	3	3	0	DHHC	palmitoyltransferase
OrfB_Zn_ribbon	PF07282.6	gi|289596263|ref|YP_003482959.1|	-	0.76	9.4	12.3	4.1	7.1	0.2	3.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
HEPN	PF05168.9	gi|289596263|ref|YP_003482959.1|	-	0.97	9.3	6.1	1.2	9.0	0.2	3.0	1	1	1	3	3	3	0	HEPN	domain
DUF2116	PF09889.4	gi|289596263|ref|YP_003482959.1|	-	1.6	8.5	14.7	0.63	9.8	0.6	3.3	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF35_N	PF12172.3	gi|289596263|ref|YP_003482959.1|	-	2.1	8.3	9.7	1.3	8.9	0.8	3.0	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Prok-RING_1	PF14446.1	gi|289596263|ref|YP_003482959.1|	-	4.2	7.1	11.3	4.7	7.0	1.0	2.4	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF329	PF03884.9	gi|289596263|ref|YP_003482959.1|	-	5.7	6.5	7.7	9.2	5.9	0.6	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
HypA	PF01155.14	gi|289596263|ref|YP_003482959.1|	-	6.3	6.5	11.9	12	5.6	4.3	2.9	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-HIT	PF04438.11	gi|289596263|ref|YP_003482959.1|	-	6.7	6.4	14.4	2.6	7.7	5.7	2.6	1	1	1	2	2	2	0	HIT	zinc	finger
zf-HYPF	PF07503.7	gi|289596263|ref|YP_003482959.1|	-	7.3	6.1	10.1	22	4.5	0.1	4.0	4	0	0	4	4	4	0	HypF	finger
A2L_zn_ribbon	PF08792.5	gi|289596263|ref|YP_003482959.1|	-	7.4	6.1	12.8	5.2	6.6	1.6	3.3	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-IS66	PF13005.2	gi|289596263|ref|YP_003482959.1|	-	8	6.5	13.7	14	5.7	0.2	4.6	3	1	1	5	5	4	0	zinc-finger	binding	domain	of	transposase	IS66
Lar_restr_allev	PF14354.1	gi|289596263|ref|YP_003482959.1|	-	9.5	6.6	10.5	29	5.0	7.1	2.0	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF131	PF01998.12	gi|289596264|ref|YP_003482960.1|	-	1.8e-20	72.0	0.0	1.8e-20	72.0	0.0	2.6	3	0	0	3	3	3	1	Protein	of	unknown	function	DUF131
Claudin_2	PF13903.1	gi|289596264|ref|YP_003482960.1|	-	0.0002	21.1	3.8	0.00036	20.2	0.1	2.0	2	0	0	2	2	2	1	PMP-22/EMP/MP20/Claudin	tight	junction
DUF1634	PF07843.6	gi|289596264|ref|YP_003482960.1|	-	0.0026	17.3	0.3	0.0026	17.3	0.2	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1634)
zf-DHHC	PF01529.15	gi|289596264|ref|YP_003482960.1|	-	0.059	12.7	2.6	0.073	12.4	1.8	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DUF3955	PF13127.1	gi|289596264|ref|YP_003482960.1|	-	9.7	5.8	19.1	0.52	9.8	0.7	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3955)
MIase	PF02426.11	gi|289596265|ref|YP_003482961.1|	-	0.16	11.8	3.1	0.75	9.6	0.2	2.7	2	1	0	2	2	2	0	Muconolactone	delta-isomerase
HpaB_N	PF11794.3	gi|289596265|ref|YP_003482961.1|	-	0.2	11.0	4.3	4.7	6.5	0.2	2.3	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
NPV_P10	PF05531.7	gi|289596265|ref|YP_003482961.1|	-	5	7.4	5.7	13	6.0	0.6	3.3	1	1	2	4	4	4	0	Nucleopolyhedrovirus	P10	protein
HAD_2	PF13419.1	gi|289596265|ref|YP_003482961.1|	-	6	7.0	12.3	5.2	7.2	1.7	2.5	2	1	1	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
Tubulin	PF00091.20	gi|289596266|ref|YP_003482962.1|	-	2.1e-39	135.5	0.0	5.5e-39	134.2	0.0	1.7	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|289596266|ref|YP_003482962.1|	-	1.8e-26	92.0	3.0	1.8e-26	92.0	2.1	1.8	2	0	0	2	2	2	1	FtsZ	family,	C-terminal	domain
MoCF_biosynth	PF00994.19	gi|289596266|ref|YP_003482962.1|	-	0.046	13.1	4.3	2.8	7.3	0.0	3.5	2	2	0	2	2	2	0	Probable	molybdopterin	binding	domain
Tubulin_2	PF13809.1	gi|289596266|ref|YP_003482962.1|	-	0.13	11.1	0.0	0.13	11.1	0.0	1.7	2	0	0	2	2	2	0	Tubulin	like
GPI	PF06560.6	gi|289596267|ref|YP_003482963.1|	-	1e-50	171.3	0.3	1.1e-50	171.1	0.2	1.0	1	0	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
Cupin_2	PF07883.6	gi|289596267|ref|YP_003482963.1|	-	1.9e-08	33.6	0.1	3.3e-08	32.8	0.0	1.5	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|289596267|ref|YP_003482963.1|	-	0.05	13.0	0.0	0.062	12.7	0.0	1.2	1	0	0	1	1	1	0	Cupin
TP_methylase	PF00590.15	gi|289596268|ref|YP_003482964.1|	-	1.1e-22	80.8	0.0	1.3e-22	80.5	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NfeD	PF01957.13	gi|289596269|ref|YP_003482965.1|	-	0.00014	22.0	0.7	0.00016	21.8	0.5	1.1	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
ABC_membrane	PF00664.18	gi|289596269|ref|YP_003482965.1|	-	0.013	14.9	0.9	0.015	14.7	0.6	1.1	1	0	0	1	1	1	0	ABC	transporter	transmembrane	region
DUF4173	PF13777.1	gi|289596269|ref|YP_003482965.1|	-	0.018	14.3	1.8	0.022	14.0	1.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4173)
DUF3040	PF11239.3	gi|289596269|ref|YP_003482965.1|	-	0.024	14.6	0.6	0.033	14.2	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
DUF4181	PF13789.1	gi|289596269|ref|YP_003482965.1|	-	0.033	14.1	1.4	0.036	13.9	1.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4181)
UPF0093	PF03653.8	gi|289596269|ref|YP_003482965.1|	-	0.035	14.0	0.4	0.035	14.0	0.3	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0093)
COPI_assoc	PF08507.5	gi|289596269|ref|YP_003482965.1|	-	0.053	13.1	1.4	0.066	12.8	1.0	1.1	1	0	0	1	1	1	0	COPI	associated	protein
Halogen_Hydrol	PF10112.4	gi|289596269|ref|YP_003482965.1|	-	0.069	12.5	0.5	0.083	12.2	0.4	1.1	1	0	0	1	1	1	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
Adeno_E3_CR2	PF02439.10	gi|289596269|ref|YP_003482965.1|	-	0.089	12.3	0.6	0.089	12.3	0.4	2.2	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
DUF2892	PF11127.3	gi|289596269|ref|YP_003482965.1|	-	0.36	10.6	4.5	0.5	10.2	3.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
Wzy_C	PF04932.10	gi|289596269|ref|YP_003482965.1|	-	0.37	10.5	3.5	0.44	10.3	2.5	1.1	1	0	0	1	1	1	0	O-Antigen	ligase
DUF1700	PF08006.6	gi|289596271|ref|YP_003482967.1|	-	3.7e-08	32.8	1.9	3.7e-08	32.8	1.3	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1700)
PTR2	PF00854.16	gi|289596271|ref|YP_003482967.1|	-	0.0055	15.5	3.4	0.0065	15.2	2.4	1.3	1	0	0	1	1	1	1	POT	family
Bac_DNA_binding	PF00216.16	gi|289596271|ref|YP_003482967.1|	-	0.032	14.2	0.2	0.052	13.5	0.2	1.3	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
DUF433	PF04255.9	gi|289596271|ref|YP_003482967.1|	-	0.087	12.2	0.0	0.17	11.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF433)
PadR	PF03551.9	gi|289596272|ref|YP_003482968.1|	-	4.5e-25	87.2	0.5	6.1e-25	86.8	0.4	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
PaaX	PF07848.7	gi|289596272|ref|YP_003482968.1|	-	0.0016	18.3	0.0	0.0025	17.7	0.0	1.4	1	0	0	1	1	1	1	PaaX-like	protein
HTH_34	PF13601.1	gi|289596272|ref|YP_003482968.1|	-	0.0036	17.3	0.0	0.0069	16.3	0.0	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
ArsR	PF09824.4	gi|289596272|ref|YP_003482968.1|	-	0.063	12.5	0.1	0.09	12.0	0.1	1.4	1	1	0	1	1	1	0	ArsR	transcriptional	regulator
TrmB	PF01978.14	gi|289596272|ref|YP_003482968.1|	-	0.073	12.7	0.0	0.16	11.6	0.0	1.8	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|289596272|ref|YP_003482968.1|	-	0.079	12.5	0.0	0.11	12.0	0.0	1.4	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
OsmC	PF02566.14	gi|289596274|ref|YP_003482970.1|	-	9.6e-20	70.6	0.0	1.2e-19	70.3	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
PNP_UDP_1	PF01048.15	gi|289596275|ref|YP_003482971.1|	-	3.1e-43	147.4	0.4	3.7e-43	147.1	0.2	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Sm_multidrug_ex	PF06695.6	gi|289596276|ref|YP_003482972.1|	-	2.1e-44	150.5	2.5	2.6e-44	150.2	1.7	1.1	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
DUF4220	PF13968.1	gi|289596276|ref|YP_003482972.1|	-	0.081	12.0	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4220)
SNARE_assoc	PF09335.6	gi|289596276|ref|YP_003482972.1|	-	0.094	12.9	6.7	0.072	13.2	3.3	1.8	1	1	1	2	2	2	0	SNARE	associated	Golgi	protein
Ldh_2	PF02615.9	gi|289596277|ref|YP_003482973.1|	-	2.9e-119	397.7	0.4	3.3e-119	397.5	0.3	1.0	1	0	0	1	1	1	1	Malate/L-lactate	dehydrogenase
QueF	PF14489.1	gi|289596278|ref|YP_003482974.1|	-	4.4e-21	74.6	0.1	8.9e-21	73.6	0.0	1.5	2	0	0	2	2	2	1	QueF-like	protein
Cupin_2	PF07883.6	gi|289596279|ref|YP_003482975.1|	-	9.9e-20	69.8	0.3	1.3e-19	69.4	0.2	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.14	gi|289596279|ref|YP_003482975.1|	-	3.5e-08	33.2	0.1	4.7e-08	32.8	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.17	gi|289596279|ref|YP_003482975.1|	-	1.7e-07	30.7	0.0	2.4e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	Cupin
Cupin_7	PF12973.2	gi|289596279|ref|YP_003482975.1|	-	5.3e-06	26.1	0.0	6.7e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	ChrR	Cupin-like	domain
MannoseP_isomer	PF01050.13	gi|289596279|ref|YP_003482975.1|	-	2.2e-05	24.1	0.2	2.4e-05	23.9	0.1	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Asp_Arg_Hydrox	PF05118.10	gi|289596279|ref|YP_003482975.1|	-	0.00042	20.1	0.1	0.00082	19.2	0.1	1.5	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Pirin_C	PF05726.8	gi|289596279|ref|YP_003482975.1|	-	0.018	15.0	0.0	0.026	14.5	0.0	1.2	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
DUF4147	PF13660.1	gi|289596281|ref|YP_003482977.1|	-	1.8e-60	204.0	0.0	2.6e-60	203.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|289596281|ref|YP_003482977.1|	-	2.6e-32	111.1	0.5	4.7e-32	110.2	0.4	1.5	1	0	0	1	1	1	1	MOFRL	family
TFIIB	PF00382.14	gi|289596282|ref|YP_003482978.1|	-	7.7e-44	147.3	4.3	8.2e-23	80.0	0.2	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|289596282|ref|YP_003482978.1|	-	3.1e-21	74.4	0.8	4.7e-21	73.8	0.5	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.18	gi|289596282|ref|YP_003482978.1|	-	8.7e-07	28.5	0.0	0.0086	15.6	0.0	2.1	1	1	1	2	2	2	2	Cyclin,	N-terminal	domain
Sigma70_r4	PF04545.11	gi|289596282|ref|YP_003482978.1|	-	2.3e-05	23.6	0.0	0.00048	19.3	0.0	2.6	2	0	0	2	2	2	1	Sigma-70,	region	4
A2L_zn_ribbon	PF08792.5	gi|289596282|ref|YP_003482978.1|	-	8.9e-05	21.8	1.4	0.00036	19.8	0.9	2.0	1	1	0	1	1	1	1	A2L	zinc	ribbon	domain
Cyclin_C	PF02984.14	gi|289596282|ref|YP_003482978.1|	-	0.00037	20.4	0.0	0.033	14.0	0.0	2.3	1	1	1	2	2	2	1	Cyclin,	C-terminal	domain
UPF0253	PF06786.7	gi|289596282|ref|YP_003482978.1|	-	0.0019	18.2	0.7	0.079	13.0	0.0	3.3	4	0	0	4	4	4	1	Uncharacterised	protein	family	(UPF0253)
zf-ribbon_3	PF13248.1	gi|289596282|ref|YP_003482978.1|	-	0.0039	16.3	0.2	0.0088	15.2	0.1	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
HTH_11	PF08279.7	gi|289596282|ref|YP_003482978.1|	-	0.0081	15.7	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
Sigma70_r4_2	PF08281.7	gi|289596282|ref|YP_003482978.1|	-	0.0088	15.4	0.6	0.038	13.4	0.1	2.4	2	1	0	2	2	2	1	Sigma-70,	region	4
Ribosomal_S27e	PF01667.12	gi|289596282|ref|YP_003482978.1|	-	0.015	14.8	0.0	0.027	13.9	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
Lar_restr_allev	PF14354.1	gi|289596282|ref|YP_003482978.1|	-	0.022	15.0	0.3	0.022	15.0	0.2	2.0	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
GerE	PF00196.14	gi|289596282|ref|YP_003482978.1|	-	0.05	12.9	1.1	0.64	9.3	0.1	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
RRN7	PF11781.3	gi|289596282|ref|YP_003482978.1|	-	0.056	12.9	1.1	0.1	12.1	0.8	1.4	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
OrfB_Zn_ribbon	PF07282.6	gi|289596282|ref|YP_003482978.1|	-	0.064	12.9	0.4	0.18	11.5	0.3	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
HTH_AsnC-type	PF13404.1	gi|289596282|ref|YP_003482978.1|	-	0.068	12.7	0.0	0.16	11.4	0.0	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596282|ref|YP_003482978.1|	-	0.07	12.9	0.7	0.15	11.8	0.5	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HARE-HTH	PF05066.8	gi|289596282|ref|YP_003482978.1|	-	0.072	13.4	0.2	24	5.3	0.0	2.7	2	0	0	2	2	2	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
HTH_23	PF13384.1	gi|289596282|ref|YP_003482978.1|	-	0.11	12.1	3.1	0.94	9.2	0.0	3.1	3	0	0	3	3	3	0	Homeodomain-like	domain
zf-NADH-PPase	PF09297.6	gi|289596282|ref|YP_003482978.1|	-	0.17	11.3	3.4	0.98	8.9	0.0	3.0	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-tcix	PF14952.1	gi|289596282|ref|YP_003482978.1|	-	1.1	8.6	3.3	0.76	9.1	0.1	2.2	3	0	0	3	3	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
GATase	PF00117.23	gi|289596283|ref|YP_003482979.1|	-	9.2e-37	126.3	0.0	1e-36	126.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|289596283|ref|YP_003482979.1|	-	2.1e-10	40.4	0.3	2.2e-09	37.0	0.2	2.4	1	1	0	1	1	1	1	Peptidase	C26
GATase_3	PF07685.9	gi|289596283|ref|YP_003482979.1|	-	0.025	14.1	0.2	0.077	12.5	0.0	1.9	3	0	0	3	3	3	0	CobB/CobQ-like	glutamine	amidotransferase	domain
CorA	PF01544.13	gi|289596284|ref|YP_003482980.1|	-	1.7e-39	135.6	5.5	3.1e-39	134.7	3.8	1.4	1	1	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
PGK	PF00162.14	gi|289596285|ref|YP_003482981.1|	-	9.4e-110	366.7	0.0	1.1e-109	366.5	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Usp	PF00582.21	gi|289596286|ref|YP_003482982.1|	-	1.7e-23	83.3	0.6	7.1e-15	55.4	0.0	3.0	2	1	0	2	2	2	2	Universal	stress	protein	family
MGS	PF02142.17	gi|289596286|ref|YP_003482982.1|	-	0.0031	17.3	0.1	0.084	12.8	0.0	2.4	1	1	1	2	2	2	2	MGS-like	domain
CitMHS	PF03600.11	gi|289596287|ref|YP_003482983.1|	-	9.5e-54	182.2	26.7	9.5e-54	182.2	18.5	1.4	1	1	1	2	2	2	1	Citrate	transporter
Na_sulph_symp	PF00939.14	gi|289596287|ref|YP_003482983.1|	-	2.7e-23	82.5	40.8	3.5e-13	49.2	13.5	2.0	1	1	1	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
ArsB	PF02040.10	gi|289596287|ref|YP_003482983.1|	-	1.2e-21	77.1	33.4	1.6e-21	76.8	23.2	1.0	1	0	0	1	1	1	1	Arsenical	pump	membrane	protein
NhaB	PF06450.7	gi|289596287|ref|YP_003482983.1|	-	4.1e-05	22.3	5.8	4.1e-05	22.3	4.0	2.6	2	1	0	2	2	2	1	Bacterial	Na+/H+	antiporter	B	(NhaB)
TPPK_C	PF12555.3	gi|289596287|ref|YP_003482983.1|	-	0.019	14.6	0.7	0.019	14.6	0.5	3.9	5	0	0	5	5	5	0	Thiamine	pyrophosphokinase	C	terminal
Tom5	PF10642.4	gi|289596287|ref|YP_003482983.1|	-	0.084	12.5	0.2	0.19	11.3	0.1	1.6	1	0	0	1	1	1	0	Mitochondrial	import	receptor	subunit	or	translocase
Amidohydro_1	PF01979.15	gi|289596288|ref|YP_003482984.1|	-	3e-22	79.7	0.0	1.9e-20	73.7	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|289596288|ref|YP_003482984.1|	-	5.9e-08	33.0	0.0	7.9e-05	22.8	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|289596288|ref|YP_003482984.1|	-	5.3e-06	26.1	0.0	1e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
A_deaminase	PF00962.17	gi|289596288|ref|YP_003482984.1|	-	0.03	13.2	0.0	0.042	12.7	0.0	1.2	1	0	0	1	1	1	0	Adenosine/AMP	deaminase
Amidohydro_3	PF07969.6	gi|289596288|ref|YP_003482984.1|	-	0.036	13.2	0.0	9.9	5.2	0.0	2.7	2	2	1	3	3	3	0	Amidohydrolase	family
DNA_pol_E_B	PF04042.11	gi|289596289|ref|YP_003482985.1|	-	2.5e-16	59.5	0.0	3.7e-16	58.9	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos_2	PF12850.2	gi|289596289|ref|YP_003482985.1|	-	2.3e-10	40.5	0.0	4.4e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|289596289|ref|YP_003482985.1|	-	1e-07	31.5	1.5	3.3e-07	29.8	1.1	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF762	PF05555.6	gi|289596289|ref|YP_003482985.1|	-	0.0051	16.0	0.0	0.0084	15.3	0.0	1.3	1	0	0	1	1	1	1	Coxiella	burnetii	protein	of	unknown	function	(DUF762)
tRNA_anti-codon	PF01336.20	gi|289596289|ref|YP_003482985.1|	-	0.022	14.6	0.2	0.071	12.9	0.0	2.0	2	0	0	2	2	2	0	OB-fold	nucleic	acid	binding	domain
DUF3126	PF11324.3	gi|289596289|ref|YP_003482985.1|	-	0.1	12.2	0.4	0.29	10.8	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3126)
GHMP_kinases_N	PF00288.21	gi|289596290|ref|YP_003482986.1|	-	6.8e-07	29.2	0.5	1.3e-06	28.3	0.1	1.7	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
DFP	PF04127.10	gi|289596291|ref|YP_003482987.1|	-	7.1e-38	130.0	0.0	2.9e-37	128.0	0.0	1.8	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|289596291|ref|YP_003482987.1|	-	1.2e-22	79.9	0.0	2.8e-22	78.7	0.0	1.7	1	0	0	1	1	1	1	Flavoprotein
ETF_alpha	PF00766.14	gi|289596291|ref|YP_003482987.1|	-	0.052	13.1	0.0	0.16	11.5	0.0	1.9	1	0	0	1	1	1	0	Electron	transfer	flavoprotein	FAD-binding	domain
DUF3093	PF11292.3	gi|289596292|ref|YP_003482988.1|	-	0.75	9.5	3.5	2.9	7.6	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3093)
DUF2207	PF09972.4	gi|289596292|ref|YP_003482988.1|	-	3	6.3	12.0	4	5.8	8.3	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
FA_desaturase	PF00487.19	gi|289596292|ref|YP_003482988.1|	-	6.1	6.2	6.3	8.7	5.6	4.3	1.2	1	0	0	1	1	1	0	Fatty	acid	desaturase
DPM3	PF08285.6	gi|289596292|ref|YP_003482988.1|	-	6.2	6.7	8.5	0.45	10.3	1.7	2.0	2	0	0	2	2	2	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
MFS_1	PF07690.11	gi|289596293|ref|YP_003482989.1|	-	1.1e-21	77.0	50.3	1.3e-11	43.8	14.8	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|289596293|ref|YP_003482989.1|	-	7.4e-18	64.1	29.4	1.5e-17	63.1	20.5	1.4	1	1	0	1	1	1	1	MFS/sugar	transport	protein
Sugar_tr	PF00083.19	gi|289596293|ref|YP_003482989.1|	-	5e-06	25.3	42.5	0.00011	20.8	10.6	2.5	2	2	0	2	2	2	2	Sugar	(and	other)	transporter
CbtB	PF09489.5	gi|289596293|ref|YP_003482989.1|	-	0.79	9.6	6.8	2	8.3	0.2	3.8	3	0	0	3	3	3	0	Probable	cobalt	transporter	subunit	(CbtB)
Abhydrolase_6	PF12697.2	gi|289596294|ref|YP_003482990.1|	-	2.3e-23	83.2	0.0	6.4e-23	81.8	0.0	1.6	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|289596294|ref|YP_003482990.1|	-	2.6e-19	69.4	0.0	4.2e-19	68.7	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|289596294|ref|YP_003482990.1|	-	2.4e-10	40.3	0.2	5.2e-06	26.0	0.2	2.1	2	0	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_1	PF00561.15	gi|289596294|ref|YP_003482990.1|	-	1.4e-09	37.8	0.1	0.00076	19.1	0.0	2.2	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
FSH1	PF03959.8	gi|289596294|ref|YP_003482990.1|	-	1.9e-08	34.0	0.0	4.9e-08	32.6	0.0	1.6	2	0	0	2	2	2	1	Serine	hydrolase	(FSH1)
DLH	PF01738.13	gi|289596294|ref|YP_003482990.1|	-	1.4e-07	30.9	0.3	3.3e-06	26.5	0.2	2.2	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Peptidase_S9	PF00326.16	gi|289596294|ref|YP_003482990.1|	-	4.1e-06	26.1	0.1	1.2e-05	24.6	0.1	1.8	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Hydrolase_4	PF12146.3	gi|289596294|ref|YP_003482990.1|	-	0.00026	20.7	0.3	0.00051	19.8	0.2	1.4	1	0	0	1	1	1	1	Putative	lysophospholipase
PGAP1	PF07819.8	gi|289596294|ref|YP_003482990.1|	-	0.00084	18.9	0.0	0.0012	18.4	0.0	1.3	1	0	0	1	1	1	1	PGAP1-like	protein
Abhydrolase_2	PF02230.11	gi|289596294|ref|YP_003482990.1|	-	0.0081	15.6	0.2	1.1	8.6	0.0	2.9	2	1	1	3	3	3	1	Phospholipase/Carboxylesterase
AXE1	PF05448.7	gi|289596294|ref|YP_003482990.1|	-	0.0091	14.5	1.0	1.1	7.6	0.0	2.4	1	1	1	2	2	2	2	Acetyl	xylan	esterase	(AXE1)
DUF676	PF05057.9	gi|289596294|ref|YP_003482990.1|	-	0.018	14.3	0.0	0.03	13.6	0.0	1.3	1	0	0	1	1	1	0	Putative	serine	esterase	(DUF676)
DUF2048	PF09752.4	gi|289596294|ref|YP_003482990.1|	-	0.022	13.6	0.0	1.8	7.3	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
Lipase_3	PF01764.20	gi|289596294|ref|YP_003482990.1|	-	0.058	13.0	0.0	0.094	12.3	0.0	1.4	1	0	0	1	1	1	0	Lipase	(class	3)
Ser_hydrolase	PF06821.8	gi|289596294|ref|YP_003482990.1|	-	0.11	12.1	0.0	4.9	6.7	0.0	2.2	2	0	0	2	2	2	0	Serine	hydrolase
PerB	PF06590.6	gi|289596295|ref|YP_003482991.1|	-	0.1	12.8	0.0	0.16	12.2	0.0	1.3	1	0	0	1	1	1	0	PerB	protein
tRNA-synt_2	PF00152.15	gi|289596296|ref|YP_003482992.1|	-	3.9e-93	311.8	3.5	4.8e-93	311.5	2.4	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|289596296|ref|YP_003482992.1|	-	1.4e-11	44.0	0.1	3.6e-11	42.7	0.1	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|289596296|ref|YP_003482992.1|	-	4.8e-09	35.7	1.7	2.3e-06	27.0	0.2	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|289596296|ref|YP_003482992.1|	-	0.054	13.0	2.0	1.3	8.5	1.4	2.4	1	1	0	1	1	1	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
NosD	PF05048.8	gi|289596297|ref|YP_003482993.1|	-	8.5e-29	100.3	92.8	7.6e-25	87.4	41.7	2.1	1	1	1	2	2	2	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289596297|ref|YP_003482993.1|	-	4.9e-23	81.6	66.3	6e-17	61.8	22.1	3.4	1	1	2	3	3	3	3	Right	handed	beta	helix	region
Aminotran_1_2	PF00155.16	gi|289596298|ref|YP_003482994.1|	-	8.7e-30	103.8	0.0	2e-29	102.7	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|289596298|ref|YP_003482994.1|	-	0.00081	17.7	0.0	0.0011	17.3	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.8	gi|289596298|ref|YP_003482994.1|	-	0.0078	14.9	0.0	0.014	14.0	0.0	1.3	1	0	0	1	1	1	1	Allinase
Lsm_C	PF14894.1	gi|289596298|ref|YP_003482994.1|	-	0.024	14.1	0.1	0.58	9.7	0.0	2.8	2	0	0	2	2	2	0	Lsm	C-terminal
Regulator_TrmB	PF11495.3	gi|289596298|ref|YP_003482994.1|	-	0.07	12.0	0.0	0.11	11.4	0.0	1.3	1	0	0	1	1	1	0	Archaeal	transcriptional	regulator	TrmB
T2SE	PF00437.15	gi|289596299|ref|YP_003482995.1|	-	2.1e-10	39.9	0.3	1.1e-09	37.5	0.3	2.1	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.24	gi|289596299|ref|YP_003482995.1|	-	5.1e-06	26.0	0.6	5.1e-06	26.0	0.4	3.1	3	0	0	3	3	2	1	KH	domain
AAA_17	PF13207.1	gi|289596299|ref|YP_003482995.1|	-	5.2e-05	24.0	0.3	0.00043	21.0	0.0	2.6	3	1	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|289596299|ref|YP_003482995.1|	-	8.1e-05	22.9	0.2	0.044	14.0	0.0	3.0	3	0	0	3	3	2	1	AAA	domain
AAA_19	PF13245.1	gi|289596299|ref|YP_003482995.1|	-	0.0013	18.4	0.0	0.0051	16.5	0.0	2.0	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_29	PF13555.1	gi|289596299|ref|YP_003482995.1|	-	0.0015	18.0	0.0	0.0035	16.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
PIN_4	PF13638.1	gi|289596299|ref|YP_003482995.1|	-	0.0025	17.9	0.0	0.0068	16.5	0.0	1.8	1	0	0	1	1	1	1	PIN	domain
AAA_14	PF13173.1	gi|289596299|ref|YP_003482995.1|	-	0.0059	16.5	0.0	0.016	15.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Miro	PF08477.8	gi|289596299|ref|YP_003482995.1|	-	0.0069	16.8	0.1	0.056	13.9	0.0	2.5	2	0	0	2	2	2	1	Miro-like	protein
AAA_22	PF13401.1	gi|289596299|ref|YP_003482995.1|	-	0.0075	16.4	0.0	0.092	12.8	0.0	2.5	3	0	0	3	3	2	1	AAA	domain
KH_2	PF07650.12	gi|289596299|ref|YP_003482995.1|	-	0.01	15.3	0.7	0.01	15.3	0.5	3.3	3	0	0	3	3	3	0	KH	domain
FtsK_SpoIIIE	PF01580.13	gi|289596299|ref|YP_003482995.1|	-	0.01	15.2	0.0	0.022	14.2	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_16	PF13191.1	gi|289596299|ref|YP_003482995.1|	-	0.012	15.6	0.0	0.025	14.5	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
Zeta_toxin	PF06414.7	gi|289596299|ref|YP_003482995.1|	-	0.012	14.7	0.0	0.038	13.0	0.0	1.8	1	0	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.1	gi|289596299|ref|YP_003482995.1|	-	0.014	14.9	0.0	0.051	13.1	0.0	1.9	2	1	1	3	3	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|289596299|ref|YP_003482995.1|	-	0.016	14.7	0.3	0.06	12.8	0.1	2.0	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_10	PF12846.2	gi|289596299|ref|YP_003482995.1|	-	0.019	14.4	0.0	0.046	13.1	0.0	1.7	2	0	0	2	2	1	0	AAA-like	domain
Viral_helicase1	PF01443.13	gi|289596299|ref|YP_003482995.1|	-	0.02	14.3	0.0	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_33	PF13671.1	gi|289596299|ref|YP_003482995.1|	-	0.022	14.6	0.0	0.12	12.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.8	gi|289596299|ref|YP_003482995.1|	-	0.024	13.5	0.0	0.04	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_5	PF07728.9	gi|289596299|ref|YP_003482995.1|	-	0.039	13.6	0.0	0.083	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.22	gi|289596299|ref|YP_003482995.1|	-	0.041	14.1	0.1	0.19	12.0	0.0	2.2	3	0	0	3	3	2	0	ABC	transporter
AAA	PF00004.24	gi|289596299|ref|YP_003482995.1|	-	0.057	13.6	0.0	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|289596299|ref|YP_003482995.1|	-	0.07	12.7	0.0	0.2	11.2	0.0	1.7	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
KH_3	PF13014.1	gi|289596299|ref|YP_003482995.1|	-	0.075	12.7	1.1	0.24	11.1	0.0	2.4	2	0	0	2	2	2	0	KH	domain
AAA_25	PF13481.1	gi|289596299|ref|YP_003482995.1|	-	0.075	12.4	0.1	0.23	10.8	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|289596299|ref|YP_003482995.1|	-	0.083	12.8	0.0	0.2	11.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|289596299|ref|YP_003482995.1|	-	0.13	11.8	0.0	0.28	10.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
CYTH	PF01928.16	gi|289596300|ref|YP_003482996.1|	-	3e-32	111.8	3.5	3.3e-32	111.6	2.4	1.0	1	0	0	1	1	1	1	CYTH	domain
Lar_restr_allev	PF14354.1	gi|289596301|ref|YP_003482997.1|	-	0.00018	21.7	0.1	0.00024	21.3	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.6	gi|289596301|ref|YP_003482997.1|	-	0.0005	19.6	0.8	0.00073	19.1	0.6	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596301|ref|YP_003482997.1|	-	0.00077	19.2	3.7	0.0021	17.8	0.8	2.1	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289596301|ref|YP_003482997.1|	-	0.0014	18.5	1.1	0.27	11.2	0.2	2.1	2	0	0	2	2	2	1	Zinc	ribbon	domain
DZR	PF12773.2	gi|289596301|ref|YP_003482997.1|	-	0.0041	16.9	0.1	0.0053	16.5	0.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ISL3	PF14690.1	gi|289596301|ref|YP_003482997.1|	-	0.0095	15.9	0.6	0.89	9.6	0.1	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|289596301|ref|YP_003482997.1|	-	0.013	14.6	1.9	3	7.1	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Desulfoferrod_N	PF06397.7	gi|289596301|ref|YP_003482997.1|	-	0.02	14.2	4.0	0.022	14.1	0.3	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
SHOCT	PF09851.4	gi|289596301|ref|YP_003482997.1|	-	0.027	13.9	0.3	0.036	13.5	0.2	1.2	1	0	0	1	1	1	0	Short	C-terminal	domain
zf-Mss51	PF13824.1	gi|289596301|ref|YP_003482997.1|	-	0.027	14.3	0.1	0.039	13.8	0.1	1.3	1	0	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
RRN7	PF11781.3	gi|289596301|ref|YP_003482997.1|	-	0.045	13.2	0.3	4.1	6.9	0.0	2.2	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Rubredoxin	PF00301.15	gi|289596301|ref|YP_003482997.1|	-	0.047	13.5	1.7	2.1	8.2	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
UPF0547	PF10571.4	gi|289596301|ref|YP_003482997.1|	-	0.075	12.7	3.8	1.1	9.0	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Elf1	PF05129.8	gi|289596301|ref|YP_003482997.1|	-	0.083	12.5	0.3	0.9	9.2	0.0	2.0	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
TF_Zn_Ribbon	PF08271.7	gi|289596301|ref|YP_003482997.1|	-	0.091	12.0	6.8	0.89	8.9	4.7	2.3	1	1	0	1	1	1	0	TFIIB	zinc-binding
zf-C4_Topoisom	PF01396.14	gi|289596301|ref|YP_003482997.1|	-	0.094	12.2	0.4	4	7.0	0.0	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
TFIIS_C	PF01096.13	gi|289596301|ref|YP_003482997.1|	-	0.1	12.2	3.6	2.6	7.7	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Gin	PF10764.4	gi|289596301|ref|YP_003482997.1|	-	0.11	12.1	2.7	0.26	11.0	1.9	1.6	1	1	0	1	1	1	0	Inhibitor	of	sigma-G	Gin
zinc_ribbon_2	PF13240.1	gi|289596301|ref|YP_003482997.1|	-	0.13	11.8	3.1	4.5	6.8	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
FdhE	PF04216.7	gi|289596301|ref|YP_003482997.1|	-	0.15	11.7	0.9	0.21	11.2	0.6	1.2	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
RecR	PF02132.10	gi|289596301|ref|YP_003482997.1|	-	0.15	11.4	1.5	2.7	7.4	0.0	2.2	2	0	0	2	2	2	0	RecR	protein
DUF1610	PF07754.6	gi|289596301|ref|YP_003482997.1|	-	0.17	12.0	8.9	0.59	10.3	1.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-NADH-PPase	PF09297.6	gi|289596301|ref|YP_003482997.1|	-	0.17	11.3	0.8	5.5	6.5	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|289596301|ref|YP_003482997.1|	-	0.33	10.6	0.2	0.33	10.6	0.1	1.9	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Prim_Zn_Ribbon	PF08273.7	gi|289596301|ref|YP_003482997.1|	-	0.37	10.9	2.9	4.9	7.3	0.1	2.4	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-IS66	PF13005.2	gi|289596301|ref|YP_003482997.1|	-	0.64	10.0	2.7	20	5.2	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-H2C2_2	PF13465.1	gi|289596301|ref|YP_003482997.1|	-	0.77	10.1	4.7	1.8	8.9	0.7	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
Nudix_N_2	PF14803.1	gi|289596301|ref|YP_003482997.1|	-	0.78	9.4	6.8	5.2	6.8	4.7	2.2	1	1	0	1	1	1	0	Nudix	N-terminal
zf-HIT	PF04438.11	gi|289596301|ref|YP_003482997.1|	-	0.91	9.2	5.1	1.8	8.3	0.6	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
A2L_zn_ribbon	PF08792.5	gi|289596301|ref|YP_003482997.1|	-	2.2	7.8	5.5	33	4.0	3.8	2.2	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1	PF03811.8	gi|289596301|ref|YP_003482997.1|	-	4.4	6.8	8.0	0.52	9.8	2.2	2.0	2	1	0	2	2	1	0	InsA	N-terminal	domain
DUF3797	PF12677.2	gi|289596301|ref|YP_003482997.1|	-	7.2	6.3	8.1	3.7	7.2	0.1	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Pyrophosphatase	PF00719.14	gi|289596302|ref|YP_003482998.1|	-	1.1e-53	180.9	0.2	1.2e-53	180.7	0.2	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
DUF217	PF02697.9	gi|289596302|ref|YP_003482998.1|	-	0.1	12.8	1.8	0.16	12.2	1.3	1.3	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1753
CstA	PF02554.9	gi|289596303|ref|YP_003482999.1|	-	0.14	10.7	6.6	0.19	10.3	4.6	1.2	1	0	0	1	1	1	0	Carbon	starvation	protein	CstA
ABC2_membrane_2	PF12679.2	gi|289596303|ref|YP_003482999.1|	-	0.83	8.4	13.0	1.4	7.7	9.0	1.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Syntaxin-6_N	PF09177.6	gi|289596304|ref|YP_003483000.1|	-	0.003	17.9	1.9	0.0039	17.5	1.4	1.3	1	0	0	1	1	1	1	Syntaxin	6,	N-terminal
Laminin_I	PF06008.9	gi|289596304|ref|YP_003483000.1|	-	0.0056	16.0	1.6	0.0057	16.0	1.1	1.0	1	0	0	1	1	1	1	Laminin	Domain	I
Glyco_transf_10	PF00852.14	gi|289596304|ref|YP_003483000.1|	-	0.007	14.9	3.0	0.0082	14.7	2.1	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	10	(fucosyltransferase)
DUF1664	PF07889.7	gi|289596304|ref|YP_003483000.1|	-	0.0093	15.7	2.3	0.013	15.3	1.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1664)
DUF3287	PF11690.3	gi|289596304|ref|YP_003483000.1|	-	0.011	15.8	7.2	0.62	10.1	1.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3287)
Tropomyosin	PF00261.15	gi|289596304|ref|YP_003483000.1|	-	0.013	14.6	10.0	0.015	14.4	6.9	1.1	1	0	0	1	1	1	0	Tropomyosin
CENP-Q	PF13094.1	gi|289596304|ref|YP_003483000.1|	-	0.015	15.3	4.5	0.021	14.8	3.1	1.3	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Nsp1_C	PF05064.8	gi|289596304|ref|YP_003483000.1|	-	0.015	14.8	2.5	0.026	14.1	1.7	1.4	1	0	0	1	1	1	0	Nsp1-like	C-terminal	region
ScpA_ScpB	PF02616.9	gi|289596304|ref|YP_003483000.1|	-	0.026	14.0	9.1	0.033	13.7	6.3	1.1	1	0	0	1	1	1	0	ScpA/B	protein
DUF3782	PF12644.2	gi|289596304|ref|YP_003483000.1|	-	0.027	14.2	5.6	0.036	13.8	3.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
Paralemmin	PF03285.10	gi|289596304|ref|YP_003483000.1|	-	0.066	12.6	4.6	0.077	12.4	3.2	1.1	1	0	0	1	1	1	0	Paralemmin
APG6	PF04111.7	gi|289596304|ref|YP_003483000.1|	-	0.074	12.0	7.9	0.085	11.8	5.5	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg6
ADIP	PF11559.3	gi|289596304|ref|YP_003483000.1|	-	0.077	12.8	4.7	0.083	12.7	3.3	1.1	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Ax_dynein_light	PF10211.4	gi|289596304|ref|YP_003483000.1|	-	0.089	12.6	8.6	0.099	12.4	6.0	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
Mnd1	PF03962.10	gi|289596304|ref|YP_003483000.1|	-	0.092	12.4	8.0	0.15	11.7	5.6	1.3	1	1	0	1	1	1	0	Mnd1	family
DUF2203	PF09969.4	gi|289596304|ref|YP_003483000.1|	-	0.095	12.9	3.0	0.12	12.6	2.1	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
ORF6C	PF10552.4	gi|289596304|ref|YP_003483000.1|	-	0.12	12.1	4.6	0.18	11.5	3.2	1.4	1	0	0	1	1	1	0	ORF6C	domain
DUF2951	PF11166.3	gi|289596304|ref|YP_003483000.1|	-	0.13	12.1	8.8	0.16	11.8	6.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2951)
Macoilin	PF09726.4	gi|289596304|ref|YP_003483000.1|	-	0.15	10.3	7.8	0.17	10.1	5.4	1.0	1	0	0	1	1	1	0	Transmembrane	protein
Phage_Gp23	PF10669.4	gi|289596304|ref|YP_003483000.1|	-	0.17	12.0	5.0	0.22	11.6	3.5	1.2	1	0	0	1	1	1	0	Protein	gp23	(Bacteriophage	A118)
EMP24_GP25L	PF01105.19	gi|289596304|ref|YP_003483000.1|	-	0.21	11.3	2.1	0.22	11.2	1.5	1.2	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
AKNA	PF12443.3	gi|289596304|ref|YP_003483000.1|	-	0.23	11.4	2.4	0.31	11.0	1.6	1.2	1	0	0	1	1	1	0	AT-hook-containing	transcription	factor
IATP	PF04568.7	gi|289596304|ref|YP_003483000.1|	-	0.29	11.1	5.6	0.51	10.3	3.9	1.5	1	0	0	1	1	1	0	Mitochondrial	ATPase	inhibitor,	IATP
IncA	PF04156.9	gi|289596304|ref|YP_003483000.1|	-	0.31	10.6	10.5	0.55	9.8	7.3	1.3	1	1	0	1	1	1	0	IncA	protein
BRCA-2_OB3	PF09104.5	gi|289596304|ref|YP_003483000.1|	-	0.32	10.8	2.6	0.41	10.4	1.4	1.5	1	1	0	1	1	1	0	BRCA2,	oligonucleotide/oligosaccharide-binding,	domain	3
Snapin_Pallidin	PF14712.1	gi|289596304|ref|YP_003483000.1|	-	0.37	11.1	3.7	0.88	9.9	2.5	1.8	1	1	0	1	1	1	0	Snapin/Pallidin
Cob_adeno_trans	PF01923.13	gi|289596304|ref|YP_003483000.1|	-	0.46	10.2	3.1	0.86	9.3	2.2	1.5	1	1	0	1	1	1	0	Cobalamin	adenosyltransferase
DUF4375	PF14300.1	gi|289596304|ref|YP_003483000.1|	-	0.47	10.4	5.7	0.56	10.2	3.9	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4375)
AAA_23	PF13476.1	gi|289596304|ref|YP_003483000.1|	-	0.61	10.3	10.1	0.77	10.0	7.0	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4200	PF13863.1	gi|289596304|ref|YP_003483000.1|	-	0.63	10.0	18.5	1.2	9.1	12.8	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
Glyco_hydro_4C	PF11975.3	gi|289596304|ref|YP_003483000.1|	-	0.87	9.3	6.6	2.4	7.8	4.0	1.7	1	1	1	2	2	2	0	Family	4	glycosyl	hydrolase	C-terminal	domain
HSBP1	PF06825.7	gi|289596304|ref|YP_003483000.1|	-	1.1	8.8	5.5	2.2	7.9	0.2	2.3	1	1	1	2	2	2	0	Heat	shock	factor	binding	protein	1
DivIVA	PF05103.8	gi|289596304|ref|YP_003483000.1|	-	1.1	9.2	11.7	3.9	7.5	8.1	1.8	1	1	0	1	1	1	0	DivIVA	protein
zf-C4H2	PF10146.4	gi|289596304|ref|YP_003483000.1|	-	1.3	8.9	6.9	1.5	8.8	4.8	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
DUF342	PF03961.8	gi|289596304|ref|YP_003483000.1|	-	1.7	6.9	5.4	1.9	6.8	3.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DMPK_coil	PF08826.5	gi|289596304|ref|YP_003483000.1|	-	1.8	8.5	13.1	3	7.8	4.9	2.3	1	1	1	2	2	2	0	DMPK	coiled	coil	domain	like
bZIP_1	PF00170.16	gi|289596304|ref|YP_003483000.1|	-	2.7	8.0	12.9	0.59	10.1	4.1	2.2	1	1	1	2	2	2	0	bZIP	transcription	factor
XhlA	PF10779.4	gi|289596304|ref|YP_003483000.1|	-	2.9	7.8	6.8	6.1	6.8	4.7	1.7	1	1	0	1	1	1	0	Haemolysin	XhlA
DUF3606	PF12244.3	gi|289596305|ref|YP_003483001.1|	-	0.051	13.2	0.0	0.14	11.8	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3606)
Tropomyosin	PF00261.15	gi|289596306|ref|YP_003483002.1|	-	0.00061	18.9	7.1	0.00072	18.7	4.9	1.3	1	0	0	1	1	1	1	Tropomyosin
DUF1664	PF07889.7	gi|289596306|ref|YP_003483002.1|	-	0.021	14.6	2.2	0.024	14.4	1.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
PilJ	PF13675.1	gi|289596306|ref|YP_003483002.1|	-	0.025	14.8	0.1	0.032	14.5	0.1	1.2	1	0	0	1	1	1	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Syntaxin-6_N	PF09177.6	gi|289596306|ref|YP_003483002.1|	-	0.033	14.6	0.9	0.046	14.1	0.7	1.4	1	0	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF2203	PF09969.4	gi|289596306|ref|YP_003483002.1|	-	0.047	13.8	1.5	0.07	13.3	1.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
bZIP_Maf	PF03131.12	gi|289596306|ref|YP_003483002.1|	-	0.058	13.6	6.6	0.39	11.0	4.6	2.0	1	1	0	1	1	1	0	bZIP	Maf	transcription	factor
IDO	PF01231.13	gi|289596306|ref|YP_003483002.1|	-	0.069	11.5	0.9	0.079	11.3	0.6	1.1	1	0	0	1	1	1	0	Indoleamine	2,3-dioxygenase
FlxA	PF14282.1	gi|289596306|ref|YP_003483002.1|	-	0.082	12.8	0.5	0.13	12.1	0.3	1.4	1	0	0	1	1	1	0	FlxA-like	protein
Spc24	PF08286.6	gi|289596306|ref|YP_003483002.1|	-	0.087	12.5	2.2	0.13	11.9	1.5	1.4	1	0	0	1	1	1	0	Spc24	subunit	of	Ndc80
Hormone_1	PF00103.15	gi|289596306|ref|YP_003483002.1|	-	0.095	12.0	2.6	0.14	11.5	1.8	1.3	1	1	0	1	1	1	0	Somatotropin	hormone	family
DASH_Dad3	PF08656.5	gi|289596306|ref|YP_003483002.1|	-	0.11	12.1	0.6	0.24	11.1	0.4	1.6	1	0	0	1	1	1	0	DASH	complex	subunit	Dad3
TetR	PF13972.1	gi|289596306|ref|YP_003483002.1|	-	0.13	11.6	2.0	0.15	11.4	1.4	1.2	1	0	0	1	1	1	0	Bacterial	transcriptional	repressor
XhlA	PF10779.4	gi|289596306|ref|YP_003483002.1|	-	0.13	12.1	4.3	0.3	11.0	3.0	1.6	1	0	0	1	1	1	0	Haemolysin	XhlA
EMP24_GP25L	PF01105.19	gi|289596306|ref|YP_003483002.1|	-	0.22	11.2	1.7	0.26	10.9	1.2	1.2	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
Glyco_hydro_4C	PF11975.3	gi|289596306|ref|YP_003483002.1|	-	0.23	11.2	3.8	0.28	10.9	2.7	1.1	1	0	0	1	1	1	0	Family	4	glycosyl	hydrolase	C-terminal	domain
IATP	PF04568.7	gi|289596306|ref|YP_003483002.1|	-	0.29	11.1	6.6	0.39	10.7	4.1	1.5	1	1	0	1	1	1	0	Mitochondrial	ATPase	inhibitor,	IATP
Vps51	PF08700.6	gi|289596306|ref|YP_003483002.1|	-	0.31	10.9	3.6	0.19	11.6	0.9	1.8	2	0	0	2	2	2	0	Vps51/Vps67
DUF3782	PF12644.2	gi|289596306|ref|YP_003483002.1|	-	0.32	10.8	10.1	0.69	9.7	7.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
HSP70	PF00012.15	gi|289596306|ref|YP_003483002.1|	-	0.35	8.7	4.8	0.37	8.6	3.3	1.0	1	0	0	1	1	1	0	Hsp70	protein
DivIVA	PF05103.8	gi|289596306|ref|YP_003483002.1|	-	0.41	10.7	6.9	0.62	10.1	4.7	1.7	1	1	0	1	1	1	0	DivIVA	protein
Macoilin	PF09726.4	gi|289596306|ref|YP_003483002.1|	-	0.52	8.5	9.0	0.59	8.3	6.3	1.0	1	0	0	1	1	1	0	Transmembrane	protein
IncA	PF04156.9	gi|289596306|ref|YP_003483002.1|	-	0.56	9.7	4.1	0.68	9.4	2.8	1.3	1	0	0	1	1	1	0	IncA	protein
V_ATPase_I	PF01496.14	gi|289596306|ref|YP_003483002.1|	-	0.84	7.4	5.2	0.82	7.4	3.6	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2205	PF10224.4	gi|289596306|ref|YP_003483002.1|	-	0.88	9.1	7.0	0.74	9.4	3.6	1.8	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DUF972	PF06156.8	gi|289596306|ref|YP_003483002.1|	-	2.8	8.3	9.0	3.7	7.9	4.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
AAA_23	PF13476.1	gi|289596306|ref|YP_003483002.1|	-	4.7	7.4	8.1	5.4	7.2	5.6	1.1	1	0	0	1	1	1	0	AAA	domain
COG4	PF08318.7	gi|289596307|ref|YP_003483003.1|	-	0.0024	16.6	1.3	0.0027	16.5	0.9	1.0	1	0	0	1	1	1	1	COG4	transport	protein
DUF4446	PF14584.1	gi|289596307|ref|YP_003483003.1|	-	0.0026	17.6	2.2	0.0029	17.4	0.9	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
Apolipoprotein	PF01442.13	gi|289596307|ref|YP_003483003.1|	-	0.016	14.7	1.2	0.019	14.4	0.8	1.2	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
Phage_hub_GP28	PF11110.3	gi|289596307|ref|YP_003483003.1|	-	0.024	14.3	0.8	0.036	13.7	0.4	1.3	1	1	0	1	1	1	0	Baseplate	hub	distal	subunit
NAGidase	PF07555.8	gi|289596307|ref|YP_003483003.1|	-	0.044	12.6	0.4	0.057	12.3	0.3	1.1	1	0	0	1	1	1	0	beta-N-acetylglucosaminidase
Val_tRNA-synt_C	PF10458.4	gi|289596307|ref|YP_003483003.1|	-	0.046	13.8	3.9	0.55	10.3	0.1	2.6	2	0	0	2	2	2	0	Valyl	tRNA	synthetase	tRNA	binding	arm
Hydrolase_like2	PF13246.1	gi|289596307|ref|YP_003483003.1|	-	0.096	12.6	1.5	0.13	12.2	1.0	1.4	1	1	0	1	1	1	0	Putative	hydrolase	of	sodium-potassium	ATPase	alpha	subunit
Uso1_p115_C	PF04871.8	gi|289596307|ref|YP_003483003.1|	-	0.12	12.2	5.5	0.16	11.9	3.8	1.2	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Citrate_synt	PF00285.16	gi|289596307|ref|YP_003483003.1|	-	0.13	10.9	0.1	0.14	10.8	0.1	1.1	1	0	0	1	1	1	0	Citrate	synthase
APG6	PF04111.7	gi|289596307|ref|YP_003483003.1|	-	0.15	11.1	6.0	0.2	10.6	4.2	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Prp19	PF08606.6	gi|289596307|ref|YP_003483003.1|	-	0.27	10.9	2.4	4.1	7.1	0.1	2.3	1	1	1	2	2	2	0	Prp19/Pso4-like
DUF3340	PF11818.3	gi|289596307|ref|YP_003483003.1|	-	0.3	11.0	5.7	0.38	10.6	3.9	1.3	1	1	0	1	1	1	0	C-terminal	domain	of	tail	specific	protease	(DUF3340)
KilA-N	PF04383.8	gi|289596307|ref|YP_003483003.1|	-	0.34	10.5	4.2	0.49	10.0	2.9	1.6	1	1	0	1	1	1	0	KilA-N	domain
HALZ	PF02183.13	gi|289596307|ref|YP_003483003.1|	-	0.74	9.5	7.7	0.88	9.3	0.2	3.2	4	0	0	4	4	3	0	Homeobox	associated	leucine	zipper
TSC22	PF01166.13	gi|289596307|ref|YP_003483003.1|	-	1	9.3	6.1	0.17	11.8	0.5	2.4	3	1	0	3	3	3	0	TSC-22/dip/bun	family
DUF342	PF03961.8	gi|289596307|ref|YP_003483003.1|	-	1.5	7.1	6.2	1.6	7.0	4.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF972	PF06156.8	gi|289596307|ref|YP_003483003.1|	-	3.2	8.1	6.2	1.1	9.6	0.9	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
MFS_1	PF07690.11	gi|289596308|ref|YP_003483004.1|	-	2.6e-19	69.1	19.5	2.6e-19	69.1	13.5	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|289596308|ref|YP_003483004.1|	-	0.00089	17.4	14.2	0.0024	16.0	9.9	1.7	1	1	0	1	1	1	1	Transmembrane	secretion	effector
MFS_1_like	PF12832.2	gi|289596308|ref|YP_003483004.1|	-	0.01	15.5	0.2	0.01	15.5	0.2	4.3	5	1	1	6	6	6	0	MFS_1	like	family
DUF3139	PF11337.3	gi|289596308|ref|YP_003483004.1|	-	1.1	9.5	13.0	0.33	11.2	0.2	4.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3139)
Tetraspannin	PF00335.15	gi|289596309|ref|YP_003483005.1|	-	0.043	13.0	6.6	0.052	12.8	4.6	1.2	1	0	0	1	1	1	0	Tetraspanin	family
Sensor	PF13796.1	gi|289596309|ref|YP_003483005.1|	-	0.065	12.8	0.2	5.9	6.4	0.0	2.0	2	0	0	2	2	2	0	Putative	sensor
DUF3040	PF11239.3	gi|289596309|ref|YP_003483005.1|	-	0.071	13.1	1.6	4.6	7.3	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF1301	PF06979.7	gi|289596309|ref|YP_003483005.1|	-	0.13	12.4	1.8	0.37	10.9	1.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1301)
DUF3278	PF11683.3	gi|289596309|ref|YP_003483005.1|	-	0.34	10.9	4.1	0.59	10.1	0.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3278)
DUF3671	PF12420.3	gi|289596309|ref|YP_003483005.1|	-	0.59	10.1	9.7	2.7	8.0	6.9	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF1218	PF06749.7	gi|289596309|ref|YP_003483005.1|	-	1.1	9.7	3.2	0.85	10.1	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1218)
DUF2721	PF11026.3	gi|289596309|ref|YP_003483005.1|	-	2	8.0	7.0	5.4	6.6	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
DUF2371	PF10177.4	gi|289596309|ref|YP_003483005.1|	-	3	7.7	7.3	13	5.6	5.1	2.0	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
DUF423	PF04241.10	gi|289596309|ref|YP_003483005.1|	-	4.9	7.1	7.7	11	6.0	0.4	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF423)
IncA	PF04156.9	gi|289596309|ref|YP_003483005.1|	-	5.9	6.4	10.1	0.19	11.2	0.2	2.0	1	1	1	2	2	2	0	IncA	protein
Ribosomal_S3Ae	PF01015.13	gi|289596310|ref|YP_003483006.1|	-	8.1e-72	240.6	3.0	1.2e-71	240.1	2.1	1.2	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF1495	PF07381.6	gi|289596310|ref|YP_003483006.1|	-	0.022	14.4	0.2	0.068	12.8	0.1	1.8	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
Spore_II_R	PF09551.5	gi|289596310|ref|YP_003483006.1|	-	0.052	13.5	2.6	0.06	13.3	0.2	2.1	1	1	1	2	2	2	0	Stage	II	sporulation	protein	R	(spore_II_R)
PALP	PF00291.20	gi|289596311|ref|YP_003483007.1|	-	2.3e-65	220.8	0.0	2.7e-65	220.6	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
TrkA_N	PF02254.13	gi|289596311|ref|YP_003483007.1|	-	4e-05	23.5	0.1	0.00014	21.8	0.0	1.8	2	0	0	2	2	2	1	TrkA-N	domain
HypA	PF01155.14	gi|289596311|ref|YP_003483007.1|	-	0.0081	15.8	0.9	0.016	14.8	0.6	1.5	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-C3HC4_3	PF13920.1	gi|289596311|ref|YP_003483007.1|	-	0.016	14.8	1.2	0.029	14.0	0.8	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Orthopox_F6	PF06601.7	gi|289596311|ref|YP_003483007.1|	-	0.045	13.6	0.0	0.23	11.3	0.0	2.2	2	0	0	2	2	2	0	Orthopoxvirus	F6	protein
Glyco_hydro_57	PF03065.10	gi|289596311|ref|YP_003483007.1|	-	0.056	12.3	0.0	0.088	11.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	57
DZR	PF12773.2	gi|289596311|ref|YP_003483007.1|	-	0.089	12.6	1.1	0.15	11.8	0.8	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
SHMT	PF00464.14	gi|289596312|ref|YP_003483008.1|	-	6.2e-40	136.7	0.1	2e-39	135.1	0.0	1.7	1	1	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|289596312|ref|YP_003483008.1|	-	3.6e-06	26.3	0.0	1.2e-05	24.6	0.0	1.8	1	1	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.8	gi|289596312|ref|YP_003483008.1|	-	0.024	13.3	0.0	0.051	12.3	0.0	1.5	2	0	0	2	2	2	0	L-seryl-tRNA	selenium	transferase
DegT_DnrJ_EryC1	PF01041.12	gi|289596312|ref|YP_003483008.1|	-	0.033	13.2	0.0	0.062	12.3	0.0	1.4	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|289596312|ref|YP_003483008.1|	-	0.033	12.4	0.0	0.045	12.0	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
FTHFS	PF01268.14	gi|289596313|ref|YP_003483009.1|	-	6.5e-221	734.1	0.0	7.3e-221	733.9	0.0	1.0	1	0	0	1	1	1	1	Formate--tetrahydrofolate	ligase
AP_endonuc_2	PF01261.19	gi|289596314|ref|YP_003483010.1|	-	5.1e-13	48.8	0.0	1.3e-12	47.5	0.0	1.6	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.9	gi|289596314|ref|YP_003483010.1|	-	0.00022	20.3	0.0	0.00039	19.5	0.0	1.3	1	0	0	1	1	1	1	UV-endonuclease	UvdE
SIS	PF01380.17	gi|289596315|ref|YP_003483011.1|	-	1.6e-21	76.3	0.0	2.1e-21	75.8	0.0	1.2	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|289596315|ref|YP_003483011.1|	-	3e-08	33.4	1.3	0.00031	20.4	0.3	2.2	1	1	1	2	2	2	2	SIS	domain
ADH_zinc_N	PF00107.21	gi|289596315|ref|YP_003483011.1|	-	0.11	12.1	0.1	0.33	10.5	0.0	1.8	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
RNA_binding	PF01877.12	gi|289596316|ref|YP_003483012.1|	-	1.6e-20	73.2	0.7	6.2e-20	71.4	0.5	1.7	1	1	0	1	1	1	1	RNA	binding
Abi	PF02517.11	gi|289596317|ref|YP_003483013.1|	-	3.3e-14	52.7	6.8	3.3e-14	52.7	4.7	3.6	3	1	0	3	3	2	1	CAAX	protease	self-immunity
TF_Zn_Ribbon	PF08271.7	gi|289596317|ref|YP_003483013.1|	-	6.3e-05	22.2	2.1	0.00012	21.2	1.5	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF4131	PF13567.1	gi|289596317|ref|YP_003483013.1|	-	0.0088	15.4	0.6	0.0088	15.4	0.4	3.1	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4131)
zf-ribbon_3	PF13248.1	gi|289596317|ref|YP_003483013.1|	-	0.023	13.8	1.4	2.3	7.5	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|289596317|ref|YP_003483013.1|	-	0.028	14.0	1.0	0.047	13.3	0.7	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|289596317|ref|YP_003483013.1|	-	0.052	13.3	0.2	0.081	12.7	0.1	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|289596317|ref|YP_003483013.1|	-	0.081	12.6	0.5	0.12	12.1	0.4	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
RNA_pol_Rpb2_3	PF04565.11	gi|289596317|ref|YP_003483013.1|	-	0.087	12.5	0.1	1.8	8.3	0.0	2.4	2	0	0	2	2	2	0	RNA	polymerase	Rpb2,	domain	3
DUF2072	PF09845.4	gi|289596317|ref|YP_003483013.1|	-	0.12	12.3	0.7	0.26	11.2	0.5	1.6	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS1595	PF12760.2	gi|289596317|ref|YP_003483013.1|	-	0.16	11.8	1.7	8.1	6.3	0.0	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
FYDLN_acid	PF09538.5	gi|289596317|ref|YP_003483013.1|	-	0.21	12.2	0.1	0.31	11.6	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
Ribosomal_S27	PF01599.14	gi|289596317|ref|YP_003483013.1|	-	0.46	10.3	1.8	0.61	9.9	0.1	2.1	2	0	0	2	2	2	0	Ribosomal	protein	S27a
Wzz	PF02706.10	gi|289596317|ref|YP_003483013.1|	-	1.6	8.5	3.6	4.9	6.9	2.5	1.8	1	0	0	1	1	1	0	Chain	length	determinant	protein
Arch_flagellin	PF01917.11	gi|289596318|ref|YP_003483014.1|	-	8.7e-33	113.5	9.7	2.8e-18	66.2	5.6	2.3	1	1	0	2	2	2	2	Archaebacterial	flagellin
Arch_fla_DE	PF04659.8	gi|289596319|ref|YP_003483015.1|	-	5.5e-21	74.2	0.0	7.9e-21	73.7	0.0	1.2	1	0	0	1	1	1	1	Archaeal	flagella	protein
LigT_PEase	PF02834.11	gi|289596319|ref|YP_003483015.1|	-	0.063	13.2	0.0	0.095	12.6	0.0	1.3	1	0	0	1	1	1	0	LigT	like	Phosphoesterase
Cir_Bir_Yir	PF06022.6	gi|289596319|ref|YP_003483015.1|	-	0.067	12.4	0.0	0.083	12.1	0.0	1.1	1	0	0	1	1	1	0	Plasmodium	variant	antigen	protein	Cir/Yir/Bir
THUMP	PF02926.12	gi|289596320|ref|YP_003483016.1|	-	1.8e-11	44.1	0.2	1.8e-11	44.1	0.1	2.0	2	0	0	2	2	2	1	THUMP	domain
zf-C2H2_4	PF13894.1	gi|289596320|ref|YP_003483016.1|	-	0.097	13.0	0.0	0.29	11.5	0.0	1.7	1	0	0	1	1	1	0	C2H2-type	zinc	finger
MarC	PF01914.12	gi|289596321|ref|YP_003483017.1|	-	3.6e-49	166.6	14.0	4e-49	166.4	9.7	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
TerC	PF03741.11	gi|289596321|ref|YP_003483017.1|	-	0.00018	20.9	8.8	0.0011	18.4	6.0	2.0	1	1	0	1	1	1	1	Integral	membrane	protein	TerC	family
LysE	PF01810.13	gi|289596321|ref|YP_003483017.1|	-	0.0039	16.5	10.6	0.051	12.8	7.3	2.0	1	1	0	1	1	1	1	LysE	type	translocator
BCD	PF15461.1	gi|289596321|ref|YP_003483017.1|	-	0.0085	15.5	12.0	0.0076	15.6	5.9	2.0	1	1	1	2	2	2	1	Beta-carotene	15,15'-dioxygenase
DUF2684	PF10885.3	gi|289596321|ref|YP_003483017.1|	-	0.06	13.1	1.2	0.07	12.9	0.2	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2684)
RseC_MucC	PF04246.7	gi|289596321|ref|YP_003483017.1|	-	0.15	11.6	5.5	0.2	11.2	0.2	2.4	2	1	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
Yip1	PF04893.12	gi|289596321|ref|YP_003483017.1|	-	0.18	11.3	18.7	3.3	7.1	13.0	2.3	1	1	0	1	1	1	0	Yip1	domain
DUF1673	PF07895.6	gi|289596321|ref|YP_003483017.1|	-	0.64	9.5	6.1	2.7	7.4	4.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
DUF3317	PF11779.3	gi|289596321|ref|YP_003483017.1|	-	6.2	6.3	8.2	15	5.0	0.4	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3317)
DUF4131	PF13567.1	gi|289596321|ref|YP_003483017.1|	-	8.7	5.7	10.1	1.4	8.3	0.4	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4131)
UPF0147	PF03685.8	gi|289596322|ref|YP_003483018.1|	-	9.5e-28	95.9	0.2	1e-27	95.7	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|289596322|ref|YP_003483018.1|	-	0.009	16.0	0.1	1	9.5	0.0	2.2	2	0	0	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
TMF_TATA_bd	PF12325.3	gi|289596322|ref|YP_003483018.1|	-	0.058	13.1	0.4	0.084	12.6	0.3	1.2	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
AsnC_trans_reg	PF01037.16	gi|289596323|ref|YP_003483019.1|	-	1.8e-19	69.2	0.3	2.4e-19	68.7	0.2	1.2	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|289596323|ref|YP_003483019.1|	-	0.004	16.8	0.1	0.0054	16.4	0.0	1.4	1	1	0	1	1	1	1	GYD	domain
Citrate_ly_lig	PF08218.6	gi|289596323|ref|YP_003483019.1|	-	0.11	11.8	1.3	3.5	7.0	0.1	2.1	1	1	1	2	2	2	0	Citrate	lyase	ligase	C-terminal	domain
Radical_SAM	PF04055.16	gi|289596324|ref|YP_003483020.1|	-	1.9e-08	34.6	0.1	9.7e-08	32.3	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
UPF0081	PF03652.10	gi|289596324|ref|YP_003483020.1|	-	0.093	12.8	0.0	0.22	11.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0081)
NosD	PF05048.8	gi|289596325|ref|YP_003483021.1|	-	2.3e-74	249.5	182.3	4.6e-33	114.3	36.9	4.6	1	1	3	4	4	4	4	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289596325|ref|YP_003483021.1|	-	1.5e-73	245.7	342.4	1.2e-20	73.8	33.1	6.4	1	1	6	7	7	7	7	Right	handed	beta	helix	region
fn3	PF00041.16	gi|289596325|ref|YP_003483021.1|	-	2.9e-08	33.7	3.6	7.8e-08	32.3	2.5	1.8	1	0	0	1	1	1	1	Fibronectin	type	III	domain
DUF1565	PF07602.6	gi|289596325|ref|YP_003483021.1|	-	1e-05	24.8	98.7	0.0032	16.6	5.6	6.1	1	1	3	4	4	4	4	Protein	of	unknown	function	(DUF1565)
NicO	PF03824.11	gi|289596325|ref|YP_003483021.1|	-	0.33	10.2	0.3	0.69	9.1	0.2	1.4	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
Acetyltransf_1	PF00583.19	gi|289596326|ref|YP_003483022.1|	-	4e-14	52.3	0.0	1.6e-13	50.4	0.0	1.9	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|289596326|ref|YP_003483022.1|	-	8.1e-08	32.5	0.1	1.8e-07	31.3	0.0	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|289596326|ref|YP_003483022.1|	-	1.4e-07	31.5	0.0	2.9e-07	30.5	0.0	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|289596326|ref|YP_003483022.1|	-	3e-07	30.5	0.0	8.4e-07	29.1	0.0	1.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|289596326|ref|YP_003483022.1|	-	5.7e-06	26.1	0.0	1.3e-05	25.0	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|289596326|ref|YP_003483022.1|	-	0.0019	17.8	0.0	0.011	15.4	0.0	2.0	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_4	PF13420.1	gi|289596326|ref|YP_003483022.1|	-	0.0053	16.7	0.0	0.058	13.3	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|289596326|ref|YP_003483022.1|	-	0.091	12.6	0.0	0.17	11.7	0.0	1.5	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|289596326|ref|YP_003483022.1|	-	0.098	12.5	0.0	0.22	11.4	0.0	1.6	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Phage_int_SAM_2	PF12834.2	gi|289596327|ref|YP_003483023.1|	-	0.085	13.2	0.1	0.12	12.8	0.1	1.2	1	0	0	1	1	1	0	Phage	integrase,	N-terminal
PrmA	PF06325.8	gi|289596328|ref|YP_003483024.1|	-	2.9e-11	43.0	0.1	7.1e-11	41.7	0.1	1.5	1	1	1	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|289596328|ref|YP_003483024.1|	-	1.1e-10	41.2	0.0	1.5e-10	40.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|289596328|ref|YP_003483024.1|	-	1.8e-08	34.3	0.0	2.6e-08	33.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|289596328|ref|YP_003483024.1|	-	3.3e-07	30.0	0.1	5.5e-07	29.3	0.0	1.5	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Cons_hypoth95	PF03602.10	gi|289596328|ref|YP_003483024.1|	-	5.3e-07	29.2	0.0	7.2e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_31	PF13847.1	gi|289596328|ref|YP_003483024.1|	-	1.2e-05	24.9	0.1	1.6e-05	24.5	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289596328|ref|YP_003483024.1|	-	2.5e-05	24.8	0.0	3.4e-05	24.3	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|289596328|ref|YP_003483024.1|	-	3.5e-05	23.4	0.1	4.8e-05	23.0	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
DUF43	PF01861.11	gi|289596328|ref|YP_003483024.1|	-	0.0015	17.5	0.0	0.002	17.1	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF43
N6_Mtase	PF02384.11	gi|289596328|ref|YP_003483024.1|	-	0.011	14.8	0.3	0.095	11.7	0.2	2.1	1	1	0	1	1	1	0	N-6	DNA	Methylase
DNA_methylase	PF00145.12	gi|289596328|ref|YP_003483024.1|	-	0.012	14.7	0.0	0.021	13.9	0.0	1.2	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.5	gi|289596328|ref|YP_003483024.1|	-	0.093	12.2	0.1	0.17	11.4	0.1	1.4	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Spc24	PF08286.6	gi|289596329|ref|YP_003483025.1|	-	0.0091	15.6	0.7	0.0094	15.6	0.5	1.0	1	0	0	1	1	1	1	Spc24	subunit	of	Ndc80
TMF_TATA_bd	PF12325.3	gi|289596329|ref|YP_003483025.1|	-	0.017	14.8	2.4	0.02	14.5	1.7	1.1	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
bZIP_1	PF00170.16	gi|289596329|ref|YP_003483025.1|	-	0.019	14.9	1.1	0.024	14.5	0.8	1.1	1	0	0	1	1	1	0	bZIP	transcription	factor
HAP1_N	PF04849.8	gi|289596329|ref|YP_003483025.1|	-	0.034	13.0	0.8	0.037	12.9	0.6	1.0	1	0	0	1	1	1	0	HAP1	N-terminal	conserved	region
TBPIP	PF07106.8	gi|289596329|ref|YP_003483025.1|	-	0.044	13.3	0.8	0.046	13.2	0.6	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF2730	PF10805.3	gi|289596329|ref|YP_003483025.1|	-	0.046	13.4	0.3	0.049	13.3	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
Tnp_P_element	PF12017.3	gi|289596329|ref|YP_003483025.1|	-	0.062	12.5	0.2	0.068	12.3	0.1	1.1	1	0	0	1	1	1	0	Transposase	protein
CENP-Q	PF13094.1	gi|289596329|ref|YP_003483025.1|	-	0.067	13.2	0.9	0.071	13.1	0.6	1.0	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Fib_alpha	PF08702.5	gi|289596329|ref|YP_003483025.1|	-	0.073	13.1	0.1	0.073	13.1	0.1	1.0	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DivIC	PF04977.10	gi|289596329|ref|YP_003483025.1|	-	0.074	12.5	0.8	0.082	12.4	0.5	1.1	1	0	0	1	1	1	0	Septum	formation	initiator
DivIVA	PF05103.8	gi|289596329|ref|YP_003483025.1|	-	0.09	12.8	0.6	0.097	12.7	0.4	1.1	1	0	0	1	1	1	0	DivIVA	protein
RBD-FIP	PF09457.5	gi|289596329|ref|YP_003483025.1|	-	0.1	12.4	1.4	0.13	12.0	1.0	1.2	1	0	0	1	1	1	0	FIP	domain
IncA	PF04156.9	gi|289596329|ref|YP_003483025.1|	-	0.1	12.1	1.2	0.11	12.0	0.8	1.0	1	0	0	1	1	1	0	IncA	protein
HALZ	PF02183.13	gi|289596329|ref|YP_003483025.1|	-	0.11	12.2	1.2	0.14	11.8	0.8	1.3	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
Med9	PF07544.8	gi|289596329|ref|YP_003483025.1|	-	0.11	12.2	0.3	0.12	12.0	0.2	1.3	1	0	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
LSM	PF01423.17	gi|289596330|ref|YP_003483026.1|	-	3.5e-17	61.6	1.9	3.9e-17	61.5	1.3	1.0	1	0	0	1	1	1	1	LSM	domain
KaiC	PF06745.8	gi|289596331|ref|YP_003483027.1|	-	4.2e-16	58.7	0.0	4.2e-16	58.7	0.0	3.4	2	1	2	4	4	4	1	KaiC
PAXNEB	PF05625.6	gi|289596331|ref|YP_003483027.1|	-	2.7e-06	26.4	2.7	5.1e-06	25.5	0.0	2.5	2	1	0	3	3	3	1	PAXNEB	protein
DZR	PF12773.2	gi|289596331|ref|YP_003483027.1|	-	0.0027	17.4	0.7	0.005	16.6	0.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|289596331|ref|YP_003483027.1|	-	0.0034	16.5	0.6	0.0055	15.8	0.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|289596331|ref|YP_003483027.1|	-	0.01	15.5	0.7	0.016	14.9	0.5	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Pex14_N	PF04695.8	gi|289596331|ref|YP_003483027.1|	-	0.059	13.4	3.4	0.28	11.2	0.1	2.6	2	0	0	2	2	2	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
UPF0547	PF10571.4	gi|289596331|ref|YP_003483027.1|	-	0.061	13.0	1.5	0.11	12.2	1.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
AAA_25	PF13481.1	gi|289596331|ref|YP_003483027.1|	-	0.086	12.2	0.0	0.6	9.4	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
Baculo_PEP_C	PF04513.7	gi|289596331|ref|YP_003483027.1|	-	0.18	11.6	14.5	1.5	8.6	0.4	3.8	3	1	1	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
zinc_ribbon_2	PF13240.1	gi|289596331|ref|YP_003483027.1|	-	0.2	11.2	3.2	0.48	9.9	2.2	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|289596331|ref|YP_003483027.1|	-	0.79	9.0	4.1	3.4	7.0	2.7	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|289596331|ref|YP_003483027.1|	-	3	7.5	5.2	1.5	8.5	0.7	2.5	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Atg14	PF10186.4	gi|289596331|ref|YP_003483027.1|	-	3.1	6.6	48.1	2.1	7.1	7.1	3.4	1	1	2	3	3	3	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
AAA_13	PF13166.1	gi|289596331|ref|YP_003483027.1|	-	6.6	5.0	51.2	0.045	12.2	21.2	2.5	2	1	1	3	3	3	0	AAA	domain
Peptidase_M22	PF00814.20	gi|289596332|ref|YP_003483028.1|	-	1.6e-89	299.9	0.0	2.2e-89	299.4	0.0	1.2	1	0	0	1	1	1	1	Glycoprotease	family
RIO1	PF01163.17	gi|289596332|ref|YP_003483028.1|	-	2.9e-13	49.6	0.2	5.5e-13	48.6	0.1	1.4	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|289596332|ref|YP_003483028.1|	-	1.2e-09	38.2	0.5	4.1e-05	23.4	0.1	2.3	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|289596332|ref|YP_003483028.1|	-	1.9e-07	30.3	0.3	4.4e-07	29.1	0.2	1.6	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.20	gi|289596332|ref|YP_003483028.1|	-	1.6e-05	24.1	0.1	2.6e-05	23.4	0.1	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.15	gi|289596332|ref|YP_003483028.1|	-	0.0023	17.5	0.0	0.0036	16.9	0.0	1.3	1	0	0	1	1	1	1	Choline/ethanolamine	kinase
WaaY	PF06176.6	gi|289596332|ref|YP_003483028.1|	-	0.0032	16.7	0.3	0.0054	15.9	0.2	1.4	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
CmcH_NodU	PF02543.10	gi|289596332|ref|YP_003483028.1|	-	0.0032	16.6	0.0	0.0051	15.9	0.0	1.2	1	0	0	1	1	1	1	Carbamoyltransferase
Pkinase_Tyr	PF07714.12	gi|289596332|ref|YP_003483028.1|	-	0.049	12.6	0.1	0.074	12.1	0.1	1.2	1	0	0	1	1	1	0	Protein	tyrosine	kinase
BcrAD_BadFG	PF01869.15	gi|289596332|ref|YP_003483028.1|	-	0.059	12.6	0.0	0.18	11.0	0.0	1.8	1	1	0	1	1	1	0	BadF/BadG/BcrA/BcrD	ATPase	family
Ham1p_like	PF01725.11	gi|289596333|ref|YP_003483029.1|	-	1.1e-51	174.8	0.0	1.3e-51	174.6	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
QueC	PF06508.8	gi|289596334|ref|YP_003483030.1|	-	1.9e-82	275.6	0.0	3.4e-82	274.8	0.0	1.4	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|289596334|ref|YP_003483030.1|	-	2.1e-09	37.2	0.0	2.7e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.9	gi|289596334|ref|YP_003483030.1|	-	7.7e-08	32.0	0.0	1.8e-05	24.2	0.0	2.1	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.15	gi|289596334|ref|YP_003483030.1|	-	9.7e-05	21.9	0.0	0.00082	18.9	0.0	2.0	2	0	0	2	2	2	1	PP-loop	family
PAPS_reduct	PF01507.14	gi|289596334|ref|YP_003483030.1|	-	0.00018	21.3	0.0	0.00049	19.9	0.0	1.7	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.12	gi|289596334|ref|YP_003483030.1|	-	0.00024	20.0	0.1	0.0017	17.3	0.0	2.0	2	0	0	2	2	2	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|289596334|ref|YP_003483030.1|	-	0.001	17.6	0.0	0.0016	17.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
Arginosuc_synth	PF00764.14	gi|289596334|ref|YP_003483030.1|	-	0.006	15.6	0.0	0.014	14.4	0.0	1.6	2	0	0	2	2	2	1	Arginosuccinate	synthase
ATP_bind_4	PF01902.12	gi|289596334|ref|YP_003483030.1|	-	0.15	11.4	0.1	0.2	10.9	0.1	1.5	1	1	0	1	1	1	0	ATP-binding	region
PTPS	PF01242.14	gi|289596335|ref|YP_003483031.1|	-	2.5e-22	78.8	0.1	3.3e-22	78.4	0.1	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
Dynamin_M	PF01031.15	gi|289596335|ref|YP_003483031.1|	-	0.066	11.9	0.0	0.088	11.5	0.0	1.1	1	0	0	1	1	1	0	Dynamin	central	region
GRAM	PF02893.15	gi|289596336|ref|YP_003483032.1|	-	0.0044	16.4	0.0	0.016	14.7	0.0	1.9	2	0	0	2	2	2	1	GRAM	domain
CheF-arch	PF04283.7	gi|289596336|ref|YP_003483032.1|	-	0.0062	15.7	0.3	0.021	14.0	0.0	1.8	1	1	0	2	2	2	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
Vps36_ESCRT-II	PF11605.3	gi|289596336|ref|YP_003483032.1|	-	0.094	12.5	0.0	0.22	11.3	0.0	1.6	1	0	0	1	1	1	0	Vacuolar	protein	sorting	protein	36	Vps36
Phage_integrase	PF00589.17	gi|289596337|ref|YP_003483033.1|	-	1.8e-51	174.2	0.1	2.7e-51	173.6	0.1	1.3	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|289596337|ref|YP_003483033.1|	-	8.5e-12	45.2	2.9	8.5e-12	45.2	2.0	1.9	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|289596337|ref|YP_003483033.1|	-	5.5e-11	42.4	1.4	5.5e-11	42.4	1.0	2.1	2	1	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|289596337|ref|YP_003483033.1|	-	3.2e-05	23.7	0.1	6e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Integrase
DUF4309	PF14172.1	gi|289596337|ref|YP_003483033.1|	-	0.016	15.1	2.3	1.3	8.9	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4309)
PYRIN	PF02758.11	gi|289596337|ref|YP_003483033.1|	-	0.041	13.5	0.7	1.4	8.6	0.0	2.8	3	0	0	3	3	3	0	PAAD/DAPIN/Pyrin	domain
FAD_binding_3	PF01494.14	gi|289596338|ref|YP_003483034.1|	-	7.5e-11	41.6	0.2	0.0023	17.0	0.0	3.1	2	1	0	3	3	3	2	FAD	binding	domain
DAO	PF01266.19	gi|289596338|ref|YP_003483034.1|	-	1.4e-09	37.3	0.6	0.00086	18.3	0.0	2.7	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|289596338|ref|YP_003483034.1|	-	8.4e-06	25.7	0.3	3.3e-05	23.8	0.0	2.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|289596338|ref|YP_003483034.1|	-	0.00074	19.4	0.1	0.002	18.1	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|289596338|ref|YP_003483034.1|	-	0.0015	17.0	0.3	0.0088	14.5	0.0	2.1	2	0	0	2	2	2	1	HI0933-like	protein
Thi4	PF01946.12	gi|289596338|ref|YP_003483034.1|	-	0.0019	17.3	0.1	0.0051	15.9	0.1	1.7	1	0	0	1	1	1	1	Thi4	family
Lycopene_cycl	PF05834.7	gi|289596338|ref|YP_003483034.1|	-	0.0034	16.3	0.0	0.012	14.5	0.0	1.8	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|289596338|ref|YP_003483034.1|	-	0.013	15.8	2.6	0.21	12.0	0.1	2.9	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596338|ref|YP_003483034.1|	-	0.031	14.3	0.0	0.11	12.5	0.0	1.9	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|289596338|ref|YP_003483034.1|	-	0.04	13.5	0.0	0.094	12.3	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GreA_GreB_N	PF03449.10	gi|289596338|ref|YP_003483034.1|	-	0.064	13.3	0.1	0.17	11.9	0.1	1.7	1	0	0	1	1	1	0	Transcription	elongation	factor,	N-terminal
FbpA	PF05833.6	gi|289596339|ref|YP_003483035.1|	-	3.9e-59	200.3	8.9	5.5e-59	199.8	6.2	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|289596339|ref|YP_003483035.1|	-	7.6e-29	99.4	0.1	1.4e-28	98.5	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
Tho2	PF11262.3	gi|289596339|ref|YP_003483035.1|	-	0.021	13.9	7.8	0.26	10.2	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
DUF2265	PF10023.4	gi|289596339|ref|YP_003483035.1|	-	0.048	12.7	1.3	0.052	12.6	0.2	1.5	2	0	0	2	2	2	0	Predicted	aminopeptidase	(DUF2265)
Prefoldin	PF02996.12	gi|289596339|ref|YP_003483035.1|	-	0.16	11.6	10.0	1	8.9	0.2	3.3	3	0	0	3	3	3	0	Prefoldin	subunit
ISG65-75	PF11727.3	gi|289596339|ref|YP_003483035.1|	-	0.42	9.6	11.2	2.5	7.0	0.1	2.2	2	0	0	2	2	2	0	Invariant	surface	glycoprotein
DUF1978	PF09321.5	gi|289596339|ref|YP_003483035.1|	-	1.2	8.5	19.5	0.28	10.5	10.9	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1978)
DUF4407	PF14362.1	gi|289596339|ref|YP_003483035.1|	-	2.1	7.2	6.1	4.7	6.0	4.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
TPR_MLP1_2	PF07926.7	gi|289596339|ref|YP_003483035.1|	-	4.1	7.1	11.7	2.9	7.6	3.4	3.0	3	0	0	3	3	3	0	TPR/MLP1/MLP2-like	protein
HTH_24	PF13412.1	gi|289596340|ref|YP_003483036.1|	-	4.9e-17	61.0	1.1	4.9e-17	61.0	0.8	2.2	3	0	0	3	3	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|289596340|ref|YP_003483036.1|	-	1.3e-14	53.4	1.6	2.4e-14	52.5	1.1	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|289596340|ref|YP_003483036.1|	-	2.3e-12	46.4	0.3	3.8e-12	45.7	0.2	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|289596340|ref|YP_003483036.1|	-	9.7e-09	34.7	0.2	3.1e-08	33.1	0.2	1.8	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.7	gi|289596340|ref|YP_003483036.1|	-	3.7e-07	29.5	0.0	8.7e-07	28.3	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
MarR	PF01047.17	gi|289596340|ref|YP_003483036.1|	-	5.8e-07	29.1	0.1	1.6e-06	27.6	0.1	1.7	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|289596340|ref|YP_003483036.1|	-	8.4e-07	28.7	0.1	1.9e-06	27.5	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|289596340|ref|YP_003483036.1|	-	5.4e-06	25.9	0.1	1.2e-05	24.8	0.1	1.6	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|289596340|ref|YP_003483036.1|	-	1.4e-05	24.6	0.2	3.9e-05	23.2	0.1	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|289596340|ref|YP_003483036.1|	-	2.6e-05	23.7	0.2	6.9e-05	22.3	0.1	1.8	2	0	0	2	2	1	1	Homeodomain-like	domain
HTH_Crp_2	PF13545.1	gi|289596340|ref|YP_003483036.1|	-	6.2e-05	22.7	0.3	0.0032	17.2	0.1	2.7	3	0	0	3	3	2	1	Crp-like	helix-turn-helix	domain
HTH_28	PF13518.1	gi|289596340|ref|YP_003483036.1|	-	0.00011	22.0	0.2	0.0003	20.7	0.1	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
RepL	PF05732.6	gi|289596340|ref|YP_003483036.1|	-	0.00016	20.9	0.4	0.0023	17.1	0.0	2.0	1	1	0	2	2	2	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_36	PF13730.1	gi|289596340|ref|YP_003483036.1|	-	0.00019	21.4	0.0	0.00045	20.2	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289596340|ref|YP_003483036.1|	-	0.00079	19.0	0.3	0.003	17.2	0.1	1.9	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
GntR	PF00392.16	gi|289596340|ref|YP_003483036.1|	-	0.0013	18.1	0.2	0.0028	17.0	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|289596340|ref|YP_003483036.1|	-	0.0015	18.4	0.0	0.0036	17.2	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|289596340|ref|YP_003483036.1|	-	0.0018	17.8	0.0	0.0033	16.9	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_39	PF14090.1	gi|289596340|ref|YP_003483036.1|	-	0.0027	17.1	0.1	0.0052	16.2	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|289596340|ref|YP_003483036.1|	-	0.0034	17.6	0.2	0.0099	16.1	0.1	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
FeoC	PF09012.5	gi|289596340|ref|YP_003483036.1|	-	0.0035	17.0	0.0	0.0061	16.2	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
Sigma70_r4_2	PF08281.7	gi|289596340|ref|YP_003483036.1|	-	0.0043	16.4	0.2	0.03	13.8	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_34	PF13601.1	gi|289596340|ref|YP_003483036.1|	-	0.0048	16.8	0.9	0.015	15.2	0.1	2.2	3	0	0	3	3	2	1	Winged	helix	DNA-binding	domain
HTH_Mga	PF08280.6	gi|289596340|ref|YP_003483036.1|	-	0.0059	16.3	2.1	0.13	12.0	0.1	2.5	3	0	0	3	3	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_12	PF08461.5	gi|289596340|ref|YP_003483036.1|	-	0.0078	15.9	1.7	0.0086	15.7	0.1	1.9	2	0	0	2	2	1	1	Ribonuclease	R	winged-helix	domain
HTH_17	PF12728.2	gi|289596340|ref|YP_003483036.1|	-	0.0084	16.3	0.3	0.058	13.6	0.1	2.5	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_6	PF01418.12	gi|289596340|ref|YP_003483036.1|	-	0.0092	15.6	0.0	0.021	14.5	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
HTH_31	PF13560.1	gi|289596340|ref|YP_003483036.1|	-	0.013	15.7	0.4	0.021	15.0	0.3	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|289596340|ref|YP_003483036.1|	-	0.014	14.9	0.1	0.034	13.7	0.1	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Rrf2	PF02082.15	gi|289596340|ref|YP_003483036.1|	-	0.016	15.3	0.3	0.065	13.3	0.0	2.0	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_3	PF01381.17	gi|289596340|ref|YP_003483036.1|	-	0.017	14.9	1.0	0.029	14.2	0.1	1.8	2	0	0	2	2	1	0	Helix-turn-helix
Sigma70_r4	PF04545.11	gi|289596340|ref|YP_003483036.1|	-	0.025	13.8	0.2	0.055	12.7	0.1	1.7	2	0	0	2	2	1	0	Sigma-70,	region	4
Sigma70_ECF	PF07638.6	gi|289596340|ref|YP_003483036.1|	-	0.028	14.1	0.0	0.051	13.2	0.0	1.4	1	0	0	1	1	1	0	ECF	sigma	factor
HTH_Tnp_ISL3	PF13542.1	gi|289596340|ref|YP_003483036.1|	-	0.028	13.5	0.0	0.064	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
RP-C	PF03428.8	gi|289596340|ref|YP_003483036.1|	-	0.032	13.7	0.1	0.065	12.6	0.0	1.5	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
TFIIE_alpha	PF02002.12	gi|289596340|ref|YP_003483036.1|	-	0.036	13.5	0.7	0.086	12.3	0.4	1.7	1	1	0	1	1	1	0	TFIIE	alpha	subunit
RPA_C	PF08784.6	gi|289596340|ref|YP_003483036.1|	-	0.051	13.9	0.1	0.26	11.7	0.0	2.0	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
HTH_29	PF13551.1	gi|289596340|ref|YP_003483036.1|	-	0.054	13.6	0.0	0.096	12.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
Mga	PF05043.8	gi|289596340|ref|YP_003483036.1|	-	0.058	13.6	0.1	0.39	11.0	0.0	2.2	2	1	0	2	2	2	0	Mga	helix-turn-helix	domain
DDRGK	PF09756.4	gi|289596340|ref|YP_003483036.1|	-	0.06	12.7	0.5	0.095	12.1	0.0	1.5	2	0	0	2	2	1	0	DDRGK	domain
HTH_38	PF13936.1	gi|289596340|ref|YP_003483036.1|	-	0.064	12.8	0.1	0.23	11.0	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
Put_DNA-bind_N	PF06971.8	gi|289596340|ref|YP_003483036.1|	-	0.088	12.5	1.0	0.26	11.0	0.1	2.1	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
FUR	PF01475.14	gi|289596340|ref|YP_003483036.1|	-	0.089	12.7	0.3	0.66	9.9	0.0	2.1	1	1	1	2	2	2	0	Ferric	uptake	regulator	family
DUF4423	PF14394.1	gi|289596340|ref|YP_003483036.1|	-	0.11	12.0	0.2	0.29	10.6	0.1	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
KorB	PF08535.5	gi|289596340|ref|YP_003483036.1|	-	0.12	12.5	0.0	16	5.7	0.0	2.3	2	0	0	2	2	2	0	KorB	domain
Crp	PF00325.15	gi|289596340|ref|YP_003483036.1|	-	0.69	9.4	2.9	0.43	10.1	0.2	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	crp	family
MNHE	PF01899.11	gi|289596341|ref|YP_003483037.1|	-	2.2e-40	137.8	0.1	2.6e-40	137.5	0.1	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
Caps_synth_CapC	PF14102.1	gi|289596341|ref|YP_003483037.1|	-	0.088	12.9	3.3	0.16	12.0	2.3	1.4	1	0	0	1	1	1	0	Capsule	biosynthesis	CapC
DUF1673	PF07895.6	gi|289596341|ref|YP_003483037.1|	-	3.3	7.2	5.8	4.5	6.7	4.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
MrpF_PhaF	PF04066.8	gi|289596342|ref|YP_003483038.1|	-	1.2e-22	79.9	5.9	1.2e-22	79.9	4.1	1.6	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2108	PF09881.4	gi|289596342|ref|YP_003483038.1|	-	1.4	8.8	10.4	3.6	7.4	7.2	2.0	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2108)
DUF2417	PF10329.4	gi|289596342|ref|YP_003483038.1|	-	4.3	6.6	8.5	5.3	6.3	5.9	1.1	1	0	0	1	1	1	0	Region	of	unknown	function	(DUF2417)
PhaG_MnhG_YufB	PF03334.9	gi|289596343|ref|YP_003483039.1|	-	7.3e-25	86.8	10.6	8.8e-25	86.5	7.3	1.1	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
DUF4040	PF13244.1	gi|289596344|ref|YP_003483040.1|	-	6.9e-21	74.0	4.4	8.4e-21	73.7	3.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
MARVEL	PF01284.18	gi|289596344|ref|YP_003483040.1|	-	1.4	8.6	6.6	2.2	8.1	4.6	1.3	1	1	0	1	1	1	0	Membrane-associating	domain
DUF2106	PF09879.4	gi|289596345|ref|YP_003483041.1|	-	0.0089	15.3	0.1	0.014	14.7	0.0	1.4	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2106)
DUF347	PF03988.7	gi|289596345|ref|YP_003483041.1|	-	1.6	8.6	5.0	2.6	7.9	0.1	2.3	2	0	0	2	2	2	0	Repeat	of	Unknown	Function	(DUF347)
MnhB	PF04039.8	gi|289596346|ref|YP_003483042.1|	-	6.5e-27	94.0	13.0	7.5e-27	93.8	9.0	1.0	1	0	0	1	1	1	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2105	PF09878.4	gi|289596346|ref|YP_003483042.1|	-	0.011	15.3	4.9	0.015	14.9	3.4	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2105)
DnaA_N	PF11638.3	gi|289596346|ref|YP_003483042.1|	-	0.049	13.2	0.0	0.068	12.7	0.0	1.3	1	0	0	1	1	1	0	DnaA	N-terminal	domain
UPF0182	PF03699.8	gi|289596346|ref|YP_003483042.1|	-	0.081	10.8	0.8	0.099	10.5	0.6	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
Cyt_c_ox_IV	PF12270.3	gi|289596346|ref|YP_003483042.1|	-	2.5	7.8	5.8	0.81	9.4	0.6	2.3	3	0	0	3	3	3	0	Cytochrome	c	oxidase	subunit	IV
Oxidored_q2	PF00420.19	gi|289596347|ref|YP_003483043.1|	-	7.6e-25	86.3	4.1	8.6e-25	86.1	2.9	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.4	gi|289596347|ref|YP_003483043.1|	-	1.3e-05	24.8	2.7	1.3e-05	24.8	1.9	1.9	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2108)
DUF4040	PF13244.1	gi|289596347|ref|YP_003483043.1|	-	3.1	7.8	8.4	4.1	7.4	0.8	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4040)
TrbC	PF04956.8	gi|289596347|ref|YP_003483043.1|	-	8.6	6.4	8.0	11	6.1	2.9	2.1	2	0	0	2	2	2	0	TrbC/VIRB2	family
Claudin_2	PF13903.1	gi|289596347|ref|YP_003483043.1|	-	8.8	5.9	7.3	67	3.1	5.1	1.9	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
Oxidored_q1	PF00361.15	gi|289596348|ref|YP_003483044.1|	-	1.9e-45	155.2	26.5	1.9e-45	155.2	18.3	3.1	1	1	1	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|289596348|ref|YP_003483044.1|	-	0.033	13.7	2.5	0.089	12.3	0.0	3.1	2	0	0	2	2	2	0	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
PIG-Y	PF15159.1	gi|289596348|ref|YP_003483044.1|	-	0.19	11.9	0.2	0.19	11.9	0.1	4.2	4	0	0	4	4	4	0	Phosphatidylinositol	N-acetylglucosaminyltransferase	subunit	Y
Yip1	PF04893.12	gi|289596349|ref|YP_003483045.1|	-	0.027	13.9	1.7	0.058	12.9	1.2	1.5	1	1	0	1	1	1	0	Yip1	domain
Lig_chan	PF00060.21	gi|289596349|ref|YP_003483045.1|	-	0.065	12.9	0.1	0.085	12.5	0.0	1.3	1	1	0	1	1	1	0	Ligand-gated	ion	channel
ER_lumen_recept	PF00810.13	gi|289596349|ref|YP_003483045.1|	-	0.089	13.2	0.1	4	7.9	0.0	2.0	2	0	0	2	2	2	0	ER	lumen	protein	retaining	receptor
FixQ	PF05545.6	gi|289596349|ref|YP_003483045.1|	-	0.094	12.3	0.3	0.094	12.3	0.2	2.3	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
PRA1	PF03208.14	gi|289596349|ref|YP_003483045.1|	-	0.16	11.3	1.4	0.25	10.6	1.0	1.6	1	1	0	1	1	1	0	PRA1	family	protein
PepSY_TM	PF03929.11	gi|289596349|ref|YP_003483045.1|	-	4.5	7.8	9.4	0.46	10.9	0.6	2.4	2	0	0	2	2	2	0	PepSY-associated	TM	helix
Oxidored_q6	PF01058.17	gi|289596350|ref|YP_003483046.1|	-	3.2e-30	104.4	0.1	3.7e-30	104.2	0.1	1.0	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.14	gi|289596351|ref|YP_003483047.1|	-	9.9e-23	80.3	0.1	1.3e-22	79.9	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Complex1_49kDa	PF00346.14	gi|289596352|ref|YP_003483048.1|	-	2e-38	131.9	0.0	9.3e-36	123.2	0.0	2.1	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|289596352|ref|YP_003483048.1|	-	7.9e-20	71.0	2.0	1.8e-13	50.0	0.1	2.8	2	2	0	2	2	2	2	Nickel-dependent	hydrogenase
NADHdh	PF00146.16	gi|289596353|ref|YP_003483049.1|	-	4.1e-42	144.3	20.4	5.4e-42	143.9	14.1	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4_7	PF12838.2	gi|289596354|ref|YP_003483050.1|	-	3.2e-15	56.2	37.6	1.3e-08	35.0	11.3	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596354|ref|YP_003483050.1|	-	4.1e-15	54.6	15.9	2.1e-08	33.3	1.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596354|ref|YP_003483050.1|	-	1.3e-10	40.9	7.4	2.5e-10	39.9	5.1	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596354|ref|YP_003483050.1|	-	1.7e-10	41.5	19.5	1.3e-08	35.4	6.5	2.1	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|289596354|ref|YP_003483050.1|	-	1.8e-10	40.0	11.7	1.8e-05	24.3	1.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|289596354|ref|YP_003483050.1|	-	2.1e-10	40.6	11.8	4.8e-10	39.5	8.3	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596354|ref|YP_003483050.1|	-	3.3e-09	36.4	11.9	5.3e-06	26.1	0.5	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596354|ref|YP_003483050.1|	-	8.9e-09	35.2	10.8	1.4e-08	34.5	7.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596354|ref|YP_003483050.1|	-	4.3e-08	32.6	18.3	2.2e-05	24.0	1.3	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596354|ref|YP_003483050.1|	-	5.7e-08	32.9	8.5	1.2e-07	31.9	5.9	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596354|ref|YP_003483050.1|	-	1.9e-06	27.6	16.3	0.0039	17.4	1.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289596354|ref|YP_003483050.1|	-	6.6e-06	26.5	8.3	0.0045	17.5	0.8	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289596354|ref|YP_003483050.1|	-	0.00013	22.3	17.4	0.012	16.0	2.6	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|289596354|ref|YP_003483050.1|	-	0.00029	21.1	27.2	0.03	14.8	6.3	2.5	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|289596354|ref|YP_003483050.1|	-	0.00034	20.9	8.1	0.011	16.1	0.7	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
CbiA	PF01656.18	gi|289596355|ref|YP_003483051.1|	-	6.3e-18	64.8	0.0	9.4e-18	64.3	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.4	gi|289596355|ref|YP_003483051.1|	-	3.2e-17	62.1	0.2	5.4e-17	61.4	0.1	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
AAA_31	PF13614.1	gi|289596355|ref|YP_003483051.1|	-	1.4e-07	31.6	0.1	7.6e-06	25.9	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
MipZ	PF09140.6	gi|289596355|ref|YP_003483051.1|	-	1.8e-06	27.2	0.0	2.7e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|289596355|ref|YP_003483051.1|	-	2.3e-05	23.5	4.3	0.00049	19.2	0.5	2.6	1	1	1	2	2	2	2	Anion-transporting	ATPase
Fer4_NifH	PF00142.13	gi|289596355|ref|YP_003483051.1|	-	5.4e-05	22.5	0.2	0.004	16.3	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.1	gi|289596355|ref|YP_003483051.1|	-	8.4e-05	22.2	0.8	0.06	12.9	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Polysacc_deac_2	PF04748.8	gi|289596355|ref|YP_003483051.1|	-	0.15	11.0	0.0	5.9	5.8	0.0	2.1	1	1	1	2	2	2	0	Divergent	polysaccharide	deacetylase
HypA	PF01155.14	gi|289596356|ref|YP_003483052.1|	-	9e-29	99.4	0.8	1e-28	99.2	0.6	1.0	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TFIIS_C	PF01096.13	gi|289596356|ref|YP_003483052.1|	-	0.00057	19.4	2.4	0.088	12.4	0.3	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1595	PF12760.2	gi|289596356|ref|YP_003483052.1|	-	0.0013	18.4	0.4	0.61	9.9	0.0	2.2	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|289596356|ref|YP_003483052.1|	-	0.002	17.6	0.9	0.14	11.7	0.1	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289596356|ref|YP_003483052.1|	-	0.0034	17.2	0.7	1.9	8.5	0.0	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|289596356|ref|YP_003483052.1|	-	0.0057	16.3	1.8	0.19	11.4	0.1	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
DUF4379	PF14311.1	gi|289596356|ref|YP_003483052.1|	-	0.011	15.4	1.0	0.043	13.6	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
TF_Zn_Ribbon	PF08271.7	gi|289596356|ref|YP_003483052.1|	-	0.012	14.9	0.4	0.82	9.0	0.0	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-ZPR1	PF03367.8	gi|289596356|ref|YP_003483052.1|	-	0.015	14.4	2.7	0.022	13.9	0.5	2.2	2	1	0	2	2	2	0	ZPR1	zinc-finger	domain
UPF0547	PF10571.4	gi|289596356|ref|YP_003483052.1|	-	0.027	14.1	1.9	0.65	9.7	0.1	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.8	gi|289596356|ref|YP_003483052.1|	-	0.027	13.9	0.4	1.9	8.0	0.0	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2387	PF09526.5	gi|289596356|ref|YP_003483052.1|	-	0.031	14.1	0.2	3.8	7.4	0.1	2.4	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_2	PF13240.1	gi|289596356|ref|YP_003483052.1|	-	0.033	13.6	0.7	2.8	7.5	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289596356|ref|YP_003483052.1|	-	0.034	13.9	0.3	9.7	6.0	0.0	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-ISL3	PF14690.1	gi|289596356|ref|YP_003483052.1|	-	0.042	13.8	0.5	0.56	10.2	0.0	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
COX5B	PF01215.14	gi|289596356|ref|YP_003483052.1|	-	0.08	12.6	1.0	0.26	10.9	0.1	2.0	1	1	1	2	2	2	0	Cytochrome	c	oxidase	subunit	Vb
zf-3CxxC	PF13695.1	gi|289596356|ref|YP_003483052.1|	-	0.082	13.1	0.0	0.16	12.2	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	domain
zf-TFIIB	PF13453.1	gi|289596356|ref|YP_003483052.1|	-	0.1	11.7	0.1	6.3	6.0	0.0	2.4	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.6	gi|289596356|ref|YP_003483052.1|	-	0.11	12.1	2.4	2.5	7.8	0.2	2.3	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF2316	PF10078.4	gi|289596356|ref|YP_003483052.1|	-	0.12	12.3	0.1	0.18	11.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
Cytochrom_CIII	PF02085.11	gi|289596356|ref|YP_003483052.1|	-	0.12	12.4	1.0	0.22	11.6	0.7	1.5	1	1	0	1	1	1	0	Class	III	cytochrome	C	family
zf-DNA_Pol	PF08996.5	gi|289596356|ref|YP_003483052.1|	-	0.13	11.6	0.8	0.53	9.6	0.5	2.0	1	1	1	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
DUF2082	PF09855.4	gi|289596356|ref|YP_003483052.1|	-	0.13	12.1	0.2	1.3	8.8	0.0	2.3	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-CSL	PF05207.8	gi|289596356|ref|YP_003483052.1|	-	0.14	11.6	2.1	1.9	8.0	1.0	2.3	1	1	2	3	3	3	0	CSL	zinc	finger
Mut7-C	PF01927.11	gi|289596356|ref|YP_003483052.1|	-	0.18	11.7	0.9	1.1	9.2	0.6	1.9	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
Ogr_Delta	PF04606.7	gi|289596356|ref|YP_003483052.1|	-	0.2	11.3	1.1	9.8	5.9	0.0	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Lar_restr_allev	PF14354.1	gi|289596356|ref|YP_003483052.1|	-	0.26	11.6	2.1	6.1	7.2	1.5	2.2	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF35_N	PF12172.3	gi|289596356|ref|YP_003483052.1|	-	0.27	11.1	3.8	2	8.4	0.1	2.4	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ribbon_3	PF13248.1	gi|289596356|ref|YP_003483052.1|	-	1.1	8.5	3.4	2.7	7.3	0.0	2.4	3	0	0	3	3	2	0	zinc-ribbon	domain
AIRS_C	PF02769.17	gi|289596357|ref|YP_003483053.1|	-	1.4e-29	103.0	0.2	1.9e-29	102.6	0.2	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|289596357|ref|YP_003483053.1|	-	1.7e-13	50.6	0.2	3.8e-13	49.4	0.1	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Sua5_yciO_yrdC	PF01300.13	gi|289596358|ref|YP_003483054.1|	-	1.1e-46	158.3	0.0	2.4e-46	157.2	0.0	1.6	2	0	0	2	2	2	1	Telomere	recombination
zf-HYPF	PF07503.7	gi|289596358|ref|YP_003483054.1|	-	2.8e-34	116.2	15.9	4.9e-17	61.0	1.6	2.5	2	0	0	2	2	2	2	HypF	finger
Acylphosphatase	PF00708.13	gi|289596358|ref|YP_003483054.1|	-	4.9e-25	87.4	0.0	1.1e-24	86.3	0.0	1.6	1	0	0	1	1	1	1	Acylphosphatase
Peptidase_M22	PF00814.20	gi|289596358|ref|YP_003483054.1|	-	3.7e-07	29.9	0.1	2.3e-06	27.2	0.0	2.0	2	0	0	2	2	2	1	Glycoprotease	family
zinc_ribbon_2	PF13240.1	gi|289596358|ref|YP_003483054.1|	-	1.5	8.4	7.7	0.71	9.4	1.2	2.7	2	1	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|289596358|ref|YP_003483054.1|	-	1.6	8.6	9.3	1.2e+02	2.5	6.4	2.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|289596358|ref|YP_003483054.1|	-	2.6	8.0	9.1	1.5	8.8	2.5	2.6	2	0	0	2	2	2	0	Zinc	ribbon	domain
HypD	PF01924.11	gi|289596359|ref|YP_003483055.1|	-	1.6e-138	461.3	0.0	1.8e-138	461.1	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
zf-RING_6	PF14835.1	gi|289596359|ref|YP_003483055.1|	-	0.83	9.4	3.3	0.87	9.4	0.1	2.2	2	0	0	2	2	2	0	zf-RING	of	BARD1-type	protein
HupF_HypC	PF01455.13	gi|289596360|ref|YP_003483056.1|	-	3e-27	94.4	0.1	3.4e-27	94.2	0.1	1.0	1	0	0	1	1	1	1	HupF/HypC	family
DUF3006	PF11213.3	gi|289596360|ref|YP_003483056.1|	-	0.12	12.1	0.0	0.15	11.8	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
HTH_5	PF01022.15	gi|289596361|ref|YP_003483057.1|	-	5.2e-15	54.8	0.3	8.6e-15	54.1	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|289596361|ref|YP_003483057.1|	-	6.6e-09	35.4	0.0	9.2e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|289596361|ref|YP_003483057.1|	-	2.3e-06	27.5	0.2	4.9e-06	26.4	0.1	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.4	gi|289596361|ref|YP_003483057.1|	-	0.0001	22.3	0.0	0.00017	21.6	0.0	1.4	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_24	PF13412.1	gi|289596361|ref|YP_003483057.1|	-	0.00015	21.0	1.5	0.0012	18.1	0.1	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|289596361|ref|YP_003483057.1|	-	0.00098	18.8	0.8	0.0017	18.1	0.6	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|289596361|ref|YP_003483057.1|	-	0.003	17.2	0.0	0.0058	16.3	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
RepL	PF05732.6	gi|289596361|ref|YP_003483057.1|	-	0.019	14.2	0.0	0.025	13.7	0.0	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
RP-C	PF03428.8	gi|289596361|ref|YP_003483057.1|	-	0.033	13.6	0.0	0.037	13.5	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
Fer4	PF00037.22	gi|289596362|ref|YP_003483058.1|	-	2e-09	36.6	14.9	1.7e-05	24.2	3.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596362|ref|YP_003483058.1|	-	3.3e-09	36.9	17.8	5.8e-07	29.7	5.7	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596362|ref|YP_003483058.1|	-	5.8e-09	35.6	6.3	1e-08	34.8	4.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596362|ref|YP_003483058.1|	-	2.2e-08	34.2	18.5	2.5e-07	30.8	5.2	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596362|ref|YP_003483058.1|	-	7.8e-07	29.7	5.3	0.00018	22.2	0.5	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|289596362|ref|YP_003483058.1|	-	1.7e-06	27.5	10.8	6.9e-05	22.5	2.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|289596362|ref|YP_003483058.1|	-	4.6e-06	26.2	12.8	3e-05	23.6	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596362|ref|YP_003483058.1|	-	4.6e-05	23.1	9.4	0.0029	17.3	7.4	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289596362|ref|YP_003483058.1|	-	8.3e-05	22.8	5.1	0.12	12.6	0.1	2.5	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596362|ref|YP_003483058.1|	-	0.00042	20.2	7.2	0.036	14.1	5.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289596362|ref|YP_003483058.1|	-	0.014	15.9	9.6	0.16	12.5	6.0	2.4	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289596362|ref|YP_003483058.1|	-	0.015	15.6	12.6	0.18	12.2	0.7	2.7	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596362|ref|YP_003483058.1|	-	0.021	15.1	12.0	0.13	12.6	2.0	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|289596362|ref|YP_003483058.1|	-	0.11	12.8	10.6	1.8	9.0	7.4	2.4	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|289596362|ref|YP_003483058.1|	-	0.15	12.7	19.8	1.4	9.6	4.2	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Oxidored_FMN	PF00724.15	gi|289596363|ref|YP_003483059.1|	-	3e-63	213.9	0.0	4.4e-42	144.2	0.0	2.3	1	1	1	2	2	2	2	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Pyr_redox	PF00070.22	gi|289596363|ref|YP_003483059.1|	-	2.9e-17	62.8	9.0	1.7e-11	44.3	1.8	3.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|289596363|ref|YP_003483059.1|	-	1.1e-15	58.1	4.8	1.9e-07	31.2	1.5	3.9	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|289596363|ref|YP_003483059.1|	-	9.8e-06	24.6	0.3	0.0021	17.0	0.0	2.7	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|289596363|ref|YP_003483059.1|	-	1.2e-05	24.3	3.4	0.63	8.8	0.0	3.5	3	0	0	3	3	3	3	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|289596363|ref|YP_003483059.1|	-	1.9e-05	24.8	0.3	0.12	12.6	0.2	2.5	2	0	0	2	2	2	2	Putative	NAD(P)-binding
HI0933_like	PF03486.9	gi|289596363|ref|YP_003483059.1|	-	0.00019	20.0	6.4	0.032	12.6	0.1	3.2	3	0	0	3	3	3	2	HI0933-like	protein
ELFV_dehydrog	PF00208.16	gi|289596363|ref|YP_003483059.1|	-	0.00022	20.8	0.1	0.4	10.2	0.2	2.4	2	0	0	2	2	2	2	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Pyr_redox_3	PF13738.1	gi|289596363|ref|YP_003483059.1|	-	0.00034	20.7	0.0	2.2	8.2	0.0	3.1	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|289596363|ref|YP_003483059.1|	-	0.0009	18.3	2.8	0.16	11.0	0.0	2.7	2	1	1	3	3	3	2	Thi4	family
3HCDH_N	PF02737.13	gi|289596363|ref|YP_003483059.1|	-	0.0023	17.5	1.6	1.3	8.6	1.1	2.3	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|289596363|ref|YP_003483059.1|	-	0.0027	17.6	0.1	0.11	12.4	0.0	2.7	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|289596363|ref|YP_003483059.1|	-	0.0032	16.6	0.0	0.27	10.2	0.0	2.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.1	gi|289596363|ref|YP_003483059.1|	-	0.0079	15.1	0.0	2.2	7.1	0.0	3.0	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_3	PF01494.14	gi|289596363|ref|YP_003483059.1|	-	0.0079	15.2	3.4	0.15	11.0	0.1	2.5	2	1	0	2	2	2	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|289596363|ref|YP_003483059.1|	-	0.011	14.6	3.1	0.15	10.8	0.1	2.5	2	1	0	2	2	2	0	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|289596363|ref|YP_003483059.1|	-	0.012	15.2	0.9	2.6	7.5	0.0	2.6	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
KR	PF08659.5	gi|289596363|ref|YP_003483059.1|	-	0.076	12.6	0.2	0.14	11.8	0.1	1.4	1	0	0	1	1	1	0	KR	domain
UDPG_MGDP_dh_N	PF03721.9	gi|289596363|ref|YP_003483059.1|	-	0.094	12.0	1.7	0.19	11.0	0.2	2.1	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
adh_short	PF00106.20	gi|289596363|ref|YP_003483059.1|	-	0.19	11.6	0.1	0.44	10.4	0.1	1.6	1	0	0	1	1	1	0	short	chain	dehydrogenase
TrkA_N	PF02254.13	gi|289596363|ref|YP_003483059.1|	-	0.2	11.6	0.1	0.2	11.6	0.1	2.5	4	0	0	4	4	1	0	TrkA-N	domain
PcrB	PF01884.12	gi|289596363|ref|YP_003483059.1|	-	0.27	10.4	5.3	0.82	8.8	0.0	3.1	4	0	0	4	4	4	0	PcrB	family
Nitro_FeMo-Co	PF02579.12	gi|289596364|ref|YP_003483060.1|	-	2.1e-22	79.0	0.0	2.7e-22	78.6	0.0	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
NosD	PF05048.8	gi|289596365|ref|YP_003483061.1|	-	6.1e-22	77.9	47.9	3.2e-21	75.5	23.6	2.4	1	1	1	2	2	2	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289596365|ref|YP_003483061.1|	-	8e-13	48.4	42.2	1.8e-08	34.2	15.2	2.8	1	1	0	2	2	2	2	Right	handed	beta	helix	region
HCV_core	PF01542.13	gi|289596365|ref|YP_003483061.1|	-	0.0065	16.8	1.1	0.015	15.6	0.1	2.0	2	0	0	2	2	2	1	Hepatitis	C	virus	core	protein
fn3	PF00041.16	gi|289596365|ref|YP_003483061.1|	-	0.015	15.4	0.0	0.039	14.0	0.0	1.8	1	0	0	1	1	1	0	Fibronectin	type	III	domain
B12-binding	PF02310.14	gi|289596366|ref|YP_003483062.1|	-	1.4e-30	105.6	0.0	1.1e-29	102.7	0.0	2.1	2	0	0	2	2	2	1	B12	binding	domain
Radical_SAM	PF04055.16	gi|289596366|ref|YP_003483062.1|	-	4.2e-27	95.3	0.1	3.8e-26	92.2	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
Glyco_trans_4_2	PF13477.1	gi|289596366|ref|YP_003483062.1|	-	0.051	13.3	0.0	0.84	9.4	0.0	2.6	3	0	0	3	3	3	0	Glycosyl	transferase	4-like
Fer4_12	PF13353.1	gi|289596366|ref|YP_003483062.1|	-	0.12	12.4	0.0	0.5	10.4	0.0	2.1	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|289596367|ref|YP_003483063.1|	-	1.5e-25	90.3	0.0	6.6e-25	88.2	0.0	2.1	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289596367|ref|YP_003483063.1|	-	2.4e-12	47.1	0.0	5.6e-12	45.9	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289596367|ref|YP_003483063.1|	-	2.4e-11	43.7	0.0	2.4e-11	43.7	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|289596367|ref|YP_003483063.1|	-	2.4e-07	30.9	0.8	2.4e-07	30.9	0.6	2.0	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
DUF500	PF04366.7	gi|289596367|ref|YP_003483063.1|	-	0.012	15.1	0.0	0.026	13.9	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF500)
TrmB	PF01978.14	gi|289596368|ref|YP_003483064.1|	-	3.6e-13	48.9	0.4	9.7e-13	47.6	0.2	1.8	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|289596368|ref|YP_003483064.1|	-	1.2e-06	28.5	0.2	1.9e-06	27.9	0.2	1.5	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_CodY	PF08222.6	gi|289596368|ref|YP_003483064.1|	-	9.7e-05	21.6	0.0	0.0002	20.6	0.0	1.5	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|289596368|ref|YP_003483064.1|	-	0.00014	21.6	0.1	0.00053	19.7	0.0	1.9	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|289596368|ref|YP_003483064.1|	-	0.00025	20.7	0.1	0.00065	19.4	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|289596368|ref|YP_003483064.1|	-	0.00033	20.7	0.1	0.00058	19.9	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.2	gi|289596368|ref|YP_003483064.1|	-	0.00043	19.8	0.0	0.00066	19.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|289596368|ref|YP_003483064.1|	-	0.00045	19.8	0.0	0.00086	18.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_38	PF13936.1	gi|289596368|ref|YP_003483064.1|	-	0.002	17.6	0.0	0.0056	16.2	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
GntR	PF00392.16	gi|289596368|ref|YP_003483064.1|	-	0.002	17.5	0.0	0.0046	16.3	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_IclR	PF09339.5	gi|289596368|ref|YP_003483064.1|	-	0.0032	17.0	0.0	0.0062	16.0	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|289596368|ref|YP_003483064.1|	-	0.0034	16.9	0.5	0.0063	16.0	0.3	1.6	1	1	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Fe_dep_repress	PF01325.14	gi|289596368|ref|YP_003483064.1|	-	0.0058	16.5	0.2	0.012	15.5	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|289596368|ref|YP_003483064.1|	-	0.0072	15.8	0.1	0.016	14.7	0.1	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_9	PF08221.6	gi|289596368|ref|YP_003483064.1|	-	0.0097	15.7	0.0	0.027	14.3	0.0	1.6	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF1495	PF07381.6	gi|289596368|ref|YP_003483064.1|	-	0.015	14.9	0.3	0.33	10.6	0.0	2.5	1	1	2	3	3	3	0	Winged	helix	DNA-binding	domain	(DUF1495)
TBPIP	PF07106.8	gi|289596368|ref|YP_003483064.1|	-	0.016	14.7	1.5	0.022	14.3	1.0	1.3	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
PhoU	PF01895.14	gi|289596368|ref|YP_003483064.1|	-	0.019	15.3	1.3	1.8	9.0	0.1	2.3	1	1	1	2	2	2	0	PhoU	domain
HTH_5	PF01022.15	gi|289596368|ref|YP_003483064.1|	-	0.026	14.2	0.0	0.064	12.9	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HARE-HTH	PF05066.8	gi|289596368|ref|YP_003483064.1|	-	0.042	14.1	1.2	0.083	13.2	0.1	1.9	2	0	0	2	2	2	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
DUF387	PF04079.11	gi|289596368|ref|YP_003483064.1|	-	0.048	13.0	0.2	0.076	12.3	0.1	1.5	1	1	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
HTH_40	PF14493.1	gi|289596368|ref|YP_003483064.1|	-	0.073	13.3	1.0	0.17	12.0	0.2	2.0	2	1	0	2	2	2	0	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|289596368|ref|YP_003483064.1|	-	0.089	12.3	0.1	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
FaeA	PF04703.7	gi|289596368|ref|YP_003483064.1|	-	0.1	12.7	0.4	0.27	11.4	0.1	1.8	2	0	0	2	2	2	0	FaeA-like	protein
HrcA_DNA-bdg	PF03444.10	gi|289596368|ref|YP_003483064.1|	-	0.11	11.9	0.1	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_28	PF13518.1	gi|289596368|ref|YP_003483064.1|	-	0.12	12.3	0.0	0.28	11.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|289596368|ref|YP_003483064.1|	-	0.14	12.4	0.0	0.34	11.2	0.0	1.6	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
Usp	PF00582.21	gi|289596369|ref|YP_003483065.1|	-	3.6e-28	98.4	0.0	4.4e-28	98.2	0.0	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
SBF	PF01758.11	gi|289596370|ref|YP_003483066.1|	-	1.7e-35	122.1	24.6	1.7e-35	122.1	17.1	2.0	3	1	0	3	3	3	1	Sodium	Bile	acid	symporter	family
DUF4137	PF13593.1	gi|289596370|ref|YP_003483066.1|	-	1e-18	67.5	25.2	1.3e-18	67.1	17.5	1.1	1	0	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
Epiglycanin_C	PF14654.1	gi|289596370|ref|YP_003483066.1|	-	0.64	10.0	6.4	0.58	10.1	0.1	3.0	3	0	0	3	3	3	0	Mucin,	catalytic,	TM	and	cytoplasmic	tail	region
HycI	PF01750.13	gi|289596371|ref|YP_003483067.1|	-	1.4e-23	82.8	0.1	1.7e-23	82.5	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
adh_short_C2	PF13561.1	gi|289596371|ref|YP_003483067.1|	-	0.011	15.5	0.0	0.018	14.8	0.0	1.2	1	1	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
Aconitase	PF00330.15	gi|289596372|ref|YP_003483068.1|	-	4.5e-63	213.3	0.0	2.6e-38	131.7	0.1	2.4	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
4HBT	PF03061.17	gi|289596373|ref|YP_003483069.1|	-	0.00024	21.1	0.0	0.00047	20.2	0.0	1.5	2	0	0	2	2	2	1	Thioesterase	superfamily
CN_hydrolase	PF00795.17	gi|289596374|ref|YP_003483070.1|	-	2.6e-23	82.3	0.0	3.2e-23	82.0	0.0	1.1	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
MFS_1	PF07690.11	gi|289596375|ref|YP_003483071.1|	-	3.8e-30	104.7	53.4	5.6e-20	71.3	13.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|289596375|ref|YP_003483071.1|	-	4.4e-27	94.3	22.1	5.8e-27	94.0	15.3	1.0	1	0	0	1	1	1	1	Transmembrane	secretion	effector
MFS_2	PF13347.1	gi|289596375|ref|YP_003483071.1|	-	7.8e-10	37.7	36.7	1.2e-09	37.1	23.7	2.0	1	1	1	2	2	2	2	MFS/sugar	transport	protein
ATG22	PF11700.3	gi|289596375|ref|YP_003483071.1|	-	1.5e-06	26.9	34.1	0.00021	19.8	23.5	2.3	1	1	0	1	1	1	1	Vacuole	effluxer	Atg22	like
PRA1	PF03208.14	gi|289596375|ref|YP_003483071.1|	-	0.0031	16.8	4.4	0.0031	16.8	3.1	3.7	3	1	1	4	4	4	1	PRA1	family	protein
FPN1	PF06963.7	gi|289596375|ref|YP_003483071.1|	-	0.0046	15.3	3.9	0.0046	15.3	2.7	2.9	2	1	2	4	4	4	1	Ferroportin1	(FPN1)
GDC-P	PF02347.11	gi|289596376|ref|YP_003483072.1|	-	1.6e-124	415.8	0.0	2e-124	415.5	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|289596376|ref|YP_003483072.1|	-	0.0017	17.2	0.1	0.0044	15.8	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|289596376|ref|YP_003483072.1|	-	0.017	13.4	0.0	0.029	12.6	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
GDC-P	PF02347.11	gi|289596377|ref|YP_003483073.1|	-	2.7e-17	62.5	0.0	3.5e-13	49.0	0.0	2.0	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|289596377|ref|YP_003483073.1|	-	3.7e-09	35.7	0.0	5.9e-09	35.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|289596377|ref|YP_003483073.1|	-	1.3e-05	24.4	0.0	1.9e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|289596377|ref|YP_003483073.1|	-	0.00015	20.8	0.0	0.00075	18.5	0.0	2.0	3	0	0	3	3	3	1	Aminotransferase	class	I	and	II
Pyridoxal_deC	PF00282.14	gi|289596377|ref|YP_003483073.1|	-	0.019	13.4	0.0	3.8	5.8	0.0	2.2	2	0	0	2	2	2	0	Pyridoxal-dependent	decarboxylase	conserved	domain
Flavoprotein	PF02441.14	gi|289596378|ref|YP_003483074.1|	-	6.9e-33	113.0	0.2	8.6e-33	112.7	0.1	1.1	1	0	0	1	1	1	1	Flavoprotein
Na_H_Exchanger	PF00999.16	gi|289596379|ref|YP_003483075.1|	-	2.5e-52	177.6	42.3	3.1e-52	177.3	29.3	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_C	PF02080.16	gi|289596380|ref|YP_003483076.1|	-	1.7e-11	43.5	0.0	3e-11	42.7	0.0	1.5	1	0	0	1	1	1	1	TrkA-C	domain
Halogen_Hydrol	PF10112.4	gi|289596380|ref|YP_003483076.1|	-	0.78	9.1	3.1	0.38	10.1	0.1	2.0	2	0	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
TrkH	PF02386.11	gi|289596380|ref|YP_003483076.1|	-	1.5	7.3	9.4	0.41	9.1	4.5	1.5	2	0	0	2	2	2	0	Cation	transport	protein
PNP_UDP_1	PF01048.15	gi|289596381|ref|YP_003483077.1|	-	4.4e-50	169.8	0.0	5.4e-50	169.5	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Polysacc_synt	PF01943.12	gi|289596382|ref|YP_003483078.1|	-	4.4e-18	65.5	31.9	4.4e-18	65.5	22.1	3.4	1	1	2	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|289596382|ref|YP_003483078.1|	-	5e-13	49.0	14.9	5e-13	49.0	10.4	3.5	3	0	0	3	3	3	1	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.1	gi|289596382|ref|YP_003483078.1|	-	1.4e-07	31.2	31.1	1.4e-07	31.2	21.6	3.3	2	2	1	3	3	3	1	Polysaccharide	biosynthesis	protein
IspD	PF01128.14	gi|289596383|ref|YP_003483079.1|	-	1.9e-49	168.1	0.0	2.8e-49	167.6	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
adh_short	PF00106.20	gi|289596383|ref|YP_003483079.1|	-	1.5e-20	73.8	0.6	2.4e-18	66.5	0.0	2.2	1	1	1	2	2	2	2	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|289596383|ref|YP_003483079.1|	-	1.5e-12	47.8	0.9	5e-12	46.1	0.7	1.8	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
NTP_transf_3	PF12804.2	gi|289596383|ref|YP_003483079.1|	-	1.5e-12	47.8	0.0	3.9e-12	46.5	0.0	1.7	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
KR	PF08659.5	gi|289596383|ref|YP_003483079.1|	-	5e-09	36.0	0.1	1.4e-08	34.6	0.0	1.7	2	0	0	2	2	2	1	KR	domain
NTP_transferase	PF00483.18	gi|289596383|ref|YP_003483079.1|	-	0.00019	20.8	0.0	0.00033	20.0	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyl	transferase
Glyphos_transf	PF04464.9	gi|289596384|ref|YP_003483080.1|	-	1.6e-61	208.1	10.6	1.8e-61	207.9	7.3	1.0	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
GTF2I	PF02946.9	gi|289596384|ref|YP_003483080.1|	-	0.029	14.1	0.1	6.2	6.7	0.0	2.7	2	0	0	2	2	2	0	GTF2I-like	repeat
NTP_transferase	PF00483.18	gi|289596385|ref|YP_003483081.1|	-	3.4e-30	105.1	0.0	4.9e-30	104.6	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
MannoseP_isomer	PF01050.13	gi|289596385|ref|YP_003483081.1|	-	3.6e-10	39.6	0.4	7.7e-10	38.5	0.2	1.6	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_2	PF07883.6	gi|289596385|ref|YP_003483081.1|	-	1.2e-09	37.5	0.1	2.4e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.2	gi|289596385|ref|YP_003483081.1|	-	3.4e-09	36.9	0.0	8e-09	35.7	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Ectoine_synth	PF06339.7	gi|289596385|ref|YP_003483081.1|	-	0.00038	20.3	0.5	0.00062	19.6	0.3	1.2	1	0	0	1	1	1	1	Ectoine	synthase
AraC_binding	PF02311.14	gi|289596385|ref|YP_003483081.1|	-	0.00093	18.8	0.0	0.0016	18.1	0.0	1.3	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.17	gi|289596385|ref|YP_003483081.1|	-	0.01	15.2	0.0	0.04	13.3	0.0	1.8	2	0	0	2	2	2	0	Cupin
Cupin_3	PF05899.7	gi|289596385|ref|YP_003483081.1|	-	0.013	14.8	0.0	0.027	13.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
DUF1255	PF06865.6	gi|289596385|ref|YP_003483081.1|	-	0.079	13.2	0.0	0.18	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1255)
Glyco_trans_1_4	PF13692.1	gi|289596386|ref|YP_003483082.1|	-	3.9e-05	23.8	0.0	7.7e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Transaldolase	PF00923.14	gi|289596387|ref|YP_003483083.1|	-	2.1e-54	184.6	0.0	3.8e-54	183.7	0.0	1.4	1	1	0	1	1	1	1	Transaldolase
Transket_pyr	PF02779.19	gi|289596388|ref|YP_003483084.1|	-	6.3e-38	130.0	0.0	9.7e-38	129.4	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|289596388|ref|YP_003483084.1|	-	1.4e-29	102.5	0.1	4.4e-28	97.7	0.0	2.3	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Transketolase_N	PF00456.16	gi|289596389|ref|YP_003483085.1|	-	1.8e-79	266.9	0.0	2.6e-79	266.4	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|289596389|ref|YP_003483085.1|	-	1.8e-13	50.0	0.3	2.6e-09	36.4	0.1	2.8	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|289596389|ref|YP_003483085.1|	-	7e-09	35.4	0.0	5.7e-06	25.9	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|289596389|ref|YP_003483085.1|	-	1.2e-08	34.0	0.0	1.6e-08	33.6	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
XFP_N	PF09364.5	gi|289596389|ref|YP_003483085.1|	-	1.2e-06	27.3	0.0	2.9e-06	26.1	0.0	1.5	1	1	1	2	2	2	1	XFP	N-terminal	domain
AAA_25	PF13481.1	gi|289596389|ref|YP_003483085.1|	-	0.019	14.3	0.1	0.03	13.7	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
DUF763	PF05559.6	gi|289596390|ref|YP_003483086.1|	-	8.1e-131	435.7	0.0	9.3e-131	435.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH	PF00633.18	gi|289596390|ref|YP_003483086.1|	-	0.00047	19.7	0.0	0.0014	18.2	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|289596390|ref|YP_003483086.1|	-	0.12	12.5	0.0	0.49	10.6	0.0	2.0	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
KaiC	PF06745.8	gi|289596391|ref|YP_003483087.1|	-	1.8e-27	95.9	2.8	5.6e-27	94.3	1.9	1.7	1	1	0	1	1	1	1	KaiC
DUF835	PF05763.7	gi|289596391|ref|YP_003483087.1|	-	0.0033	16.9	0.4	0.011	15.3	0.1	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF835)
PAXNEB	PF05625.6	gi|289596391|ref|YP_003483087.1|	-	0.0067	15.3	0.2	1.9	7.2	0.0	2.1	2	0	0	2	2	2	2	PAXNEB	protein
GvpD	PF07088.6	gi|289596391|ref|YP_003483087.1|	-	0.0076	14.6	1.2	0.016	13.5	0.8	1.4	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.1	gi|289596391|ref|YP_003483087.1|	-	0.031	13.6	0.1	0.18	11.1	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
DAP3	PF10236.4	gi|289596391|ref|YP_003483087.1|	-	0.057	12.3	0.0	4.6	6.0	0.0	2.1	1	1	1	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Not3	PF04065.10	gi|289596391|ref|YP_003483087.1|	-	0.074	12.3	0.4	0.2	10.8	0.0	1.8	2	0	0	2	2	2	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
KaiC	PF06745.8	gi|289596392|ref|YP_003483088.1|	-	8e-05	21.8	0.5	0.00011	21.4	0.3	1.1	1	0	0	1	1	1	1	KaiC
DUF835	PF05763.7	gi|289596392|ref|YP_003483088.1|	-	0.0007	19.1	3.0	0.0007	19.1	2.1	2.1	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF835)
KaiC	PF06745.8	gi|289596393|ref|YP_003483089.1|	-	5.8e-58	195.6	1.2	6.6e-58	195.4	0.8	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596393|ref|YP_003483089.1|	-	2.9e-09	36.6	0.0	5.7e-09	35.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|289596393|ref|YP_003483089.1|	-	2.1e-08	32.9	0.5	2.7e-08	32.5	0.4	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_18	PF13238.1	gi|289596393|ref|YP_003483089.1|	-	6.4e-05	23.2	0.8	0.00011	22.4	0.6	1.4	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|289596393|ref|YP_003483089.1|	-	0.00012	21.2	0.1	0.00023	20.3	0.1	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Arch_ATPase	PF01637.13	gi|289596393|ref|YP_003483089.1|	-	0.00041	20.1	0.4	0.00058	19.6	0.3	1.2	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|289596393|ref|YP_003483089.1|	-	0.00076	19.3	0.3	0.0016	18.3	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
PAXNEB	PF05625.6	gi|289596393|ref|YP_003483089.1|	-	0.0027	16.5	3.0	0.0064	15.3	0.1	2.0	1	1	1	2	2	2	1	PAXNEB	protein
T2SE	PF00437.15	gi|289596393|ref|YP_003483089.1|	-	0.0054	15.6	0.1	0.0088	14.9	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Rad51	PF08423.6	gi|289596393|ref|YP_003483089.1|	-	0.0083	15.0	2.0	0.067	12.0	1.4	2.0	1	1	0	1	1	1	1	Rad51
DnaB_C	PF03796.10	gi|289596393|ref|YP_003483089.1|	-	0.01	14.7	0.1	0.014	14.3	0.0	1.2	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
ATP-synt_ab	PF00006.20	gi|289596393|ref|YP_003483089.1|	-	0.011	15.3	0.0	0.024	14.1	0.0	1.6	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ResIII	PF04851.10	gi|289596393|ref|YP_003483089.1|	-	0.011	15.5	0.1	0.015	15.1	0.1	1.2	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.1	gi|289596393|ref|YP_003483089.1|	-	0.013	15.4	0.1	0.028	14.3	0.1	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_19	PF13245.1	gi|289596393|ref|YP_003483089.1|	-	0.02	14.6	0.1	0.043	13.5	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|289596393|ref|YP_003483089.1|	-	0.021	14.2	0.0	0.034	13.5	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF2075	PF09848.4	gi|289596393|ref|YP_003483089.1|	-	0.028	13.4	0.0	0.034	13.1	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_28	PF13521.1	gi|289596393|ref|YP_003483089.1|	-	0.039	13.9	0.1	0.086	12.8	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
PEPCK_ATP	PF01293.15	gi|289596393|ref|YP_003483089.1|	-	0.045	12.2	0.2	0.06	11.8	0.2	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
AAA_35	PF14516.1	gi|289596393|ref|YP_003483089.1|	-	0.046	12.3	0.0	0.093	11.3	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
Hpr_kinase_C	PF07475.7	gi|289596393|ref|YP_003483089.1|	-	0.047	13.0	1.3	0.082	12.2	0.1	1.9	2	1	1	3	3	2	0	HPr	Serine	kinase	C-terminal	domain
Sigma54_activat	PF00158.21	gi|289596393|ref|YP_003483089.1|	-	0.055	12.9	0.0	0.093	12.1	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|289596393|ref|YP_003483089.1|	-	0.065	14.0	3.7	0.33	11.7	2.6	2.0	1	1	0	1	1	1	0	AAA	domain
Zot	PF05707.7	gi|289596393|ref|YP_003483089.1|	-	0.069	12.6	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
APS_kinase	PF01583.15	gi|289596393|ref|YP_003483089.1|	-	0.075	12.6	0.6	0.41	10.2	0.1	2.0	1	1	1	2	2	2	0	Adenylylsulphate	kinase
ABC_tran	PF00005.22	gi|289596393|ref|YP_003483089.1|	-	0.1	12.9	0.7	0.18	12.0	0.5	1.5	1	1	0	1	1	1	0	ABC	transporter
AAA_29	PF13555.1	gi|289596393|ref|YP_003483089.1|	-	0.11	12.0	1.0	0.23	11.0	0.7	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|289596393|ref|YP_003483089.1|	-	0.13	12.4	1.1	0.37	10.9	0.8	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|289596393|ref|YP_003483089.1|	-	0.15	12.1	2.1	0.64	10.1	1.5	1.9	1	1	0	1	1	1	0	AAA	domain
MFS_1	PF07690.11	gi|289596394|ref|YP_003483090.1|	-	7e-34	117.0	58.8	1.1e-22	80.3	16.3	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|289596394|ref|YP_003483090.1|	-	2.7e-06	25.8	20.4	4.1e-06	25.2	14.1	1.3	1	1	0	1	1	1	1	Transmembrane	secretion	effector
MFS_2	PF13347.1	gi|289596394|ref|YP_003483090.1|	-	3.5	5.9	45.2	0.2	10.0	12.0	2.8	1	1	2	3	3	3	0	MFS/sugar	transport	protein
HTH_3	PF01381.17	gi|289596395|ref|YP_003483091.1|	-	9.7e-12	44.5	0.0	2.2e-11	43.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|289596395|ref|YP_003483091.1|	-	8.3e-10	38.5	0.0	2.7e-09	36.9	0.0	1.9	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|289596395|ref|YP_003483091.1|	-	3e-09	36.9	0.0	5.8e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|289596395|ref|YP_003483091.1|	-	0.0024	17.6	0.0	0.0045	16.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|289596395|ref|YP_003483091.1|	-	0.0059	16.4	0.0	0.015	15.1	0.0	1.7	1	0	0	1	1	1	1	NUMOD1	domain
HTH_38	PF13936.1	gi|289596395|ref|YP_003483091.1|	-	0.0084	15.6	0.0	0.024	14.1	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
Phage_CI_repr	PF07022.8	gi|289596395|ref|YP_003483091.1|	-	0.047	13.7	0.0	0.058	13.4	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596395|ref|YP_003483091.1|	-	0.052	12.9	0.0	0.17	11.3	0.0	1.9	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Sigma70_r4_2	PF08281.7	gi|289596395|ref|YP_003483091.1|	-	0.053	12.9	0.0	0.13	11.7	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_26	PF13443.1	gi|289596395|ref|YP_003483091.1|	-	0.075	13.2	0.0	0.17	12.0	0.0	1.6	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Lyase_aromatic	PF00221.14	gi|289596396|ref|YP_003483092.1|	-	9.2e-194	644.2	0.8	1.1e-193	643.9	0.6	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
PmbA_TldD	PF01523.11	gi|289596398|ref|YP_003483094.1|	-	1.4e-42	146.0	0.1	1.8e-42	145.6	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|289596399|ref|YP_003483095.1|	-	3.8e-61	206.9	1.2	5.2e-61	206.4	0.9	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Proteasome	PF00227.21	gi|289596400|ref|YP_003483096.1|	-	5.5e-19	68.2	0.0	1.2e-18	67.1	0.0	1.5	1	1	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|289596400|ref|YP_003483096.1|	-	8.2e-08	31.4	2.3	1.3e-07	30.7	0.0	2.5	3	0	0	3	3	3	1	Proteasome	subunit	A	N-terminal	signature
RHH_1	PF01402.16	gi|289596400|ref|YP_003483096.1|	-	0.00069	19.4	0.2	0.012	15.4	0.0	2.4	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
MukE	PF04288.8	gi|289596400|ref|YP_003483096.1|	-	0.015	14.1	0.0	0.022	13.5	0.0	1.2	1	0	0	1	1	1	0	MukE-like	family
DUF389	PF04087.9	gi|289596401|ref|YP_003483097.1|	-	1e-25	90.3	15.3	1e-25	90.3	10.6	1.9	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF389)
DUF1129	PF06570.6	gi|289596401|ref|YP_003483097.1|	-	1.3	8.3	21.4	0.24	10.6	4.2	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1129)
AA_kinase	PF00696.23	gi|289596402|ref|YP_003483098.1|	-	6.7e-39	133.8	0.0	7.7e-39	133.6	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
FMN_dh	PF01070.13	gi|289596403|ref|YP_003483099.1|	-	4.3e-27	94.8	0.0	9e-16	57.6	0.0	2.2	1	1	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|289596403|ref|YP_003483099.1|	-	2.9e-07	29.7	2.8	0.00039	19.4	0.3	2.7	2	1	1	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|289596403|ref|YP_003483099.1|	-	3.5e-06	26.1	0.1	2e-05	23.6	0.0	1.9	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|289596403|ref|YP_003483099.1|	-	3.5e-05	22.8	0.1	7.6e-05	21.8	0.0	1.6	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
zf-ZPR1	PF03367.8	gi|289596404|ref|YP_003483100.1|	-	5.1e-39	133.0	0.1	6.8e-39	132.6	0.0	1.2	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.1	gi|289596404|ref|YP_003483100.1|	-	0.00033	20.8	0.2	0.00059	20.0	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|289596404|ref|YP_003483100.1|	-	0.046	13.0	2.0	1.8	7.9	0.0	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-piccolo	PF05715.8	gi|289596404|ref|YP_003483100.1|	-	0.053	13.5	0.3	0.084	12.8	0.2	1.2	1	0	0	1	1	1	0	Piccolo	Zn-finger
DNA_RNApol_7kD	PF03604.8	gi|289596404|ref|YP_003483100.1|	-	0.056	12.9	1.6	0.2	11.1	0.2	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
FpoO	PF10621.4	gi|289596404|ref|YP_003483100.1|	-	0.088	12.8	0.2	0.19	11.7	0.1	1.5	1	1	0	1	1	1	0	F420H2	dehydrogenase	subunit	FpoO
Prim_Zn_Ribbon	PF08273.7	gi|289596404|ref|YP_003483100.1|	-	0.097	12.7	3.1	0.44	10.6	2.1	1.9	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-Mss51	PF13824.1	gi|289596404|ref|YP_003483100.1|	-	0.72	9.7	2.6	1.6	8.6	0.8	2.1	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF4428	PF14471.1	gi|289596404|ref|YP_003483100.1|	-	1.3	8.8	4.8	7.8	6.3	3.3	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
tRNA-synt_2b	PF00587.20	gi|289596405|ref|YP_003483101.1|	-	5.7e-24	84.6	0.6	1.2e-23	83.5	0.4	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|289596405|ref|YP_003483101.1|	-	9e-21	73.6	0.2	2.3e-20	72.3	0.1	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|289596405|ref|YP_003483101.1|	-	3.4e-14	52.5	1.8	3.4e-14	52.5	1.2	2.5	2	1	1	3	3	3	1	Prolyl-tRNA	synthetase,	C-terminal
DUF643	PF04867.7	gi|289596405|ref|YP_003483101.1|	-	0.034	14.5	0.1	0.087	13.2	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF643)
DUF1353	PF07087.6	gi|289596405|ref|YP_003483101.1|	-	0.057	12.8	0.0	0.2	11.1	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1353)
HeLo	PF14479.1	gi|289596405|ref|YP_003483101.1|	-	0.1	12.3	0.7	0.19	11.4	0.5	1.4	1	0	0	1	1	1	0	Prion-inhibition	and	propagation
UbiA	PF01040.13	gi|289596406|ref|YP_003483102.1|	-	0.64	9.1	9.5	0.69	9.0	6.6	1.0	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
PIG-P	PF08510.7	gi|289596406|ref|YP_003483102.1|	-	0.96	9.0	9.7	0.87	9.2	6.2	1.4	1	1	0	1	1	1	0	PIG-P
DUF2975	PF11188.3	gi|289596406|ref|YP_003483102.1|	-	1.9	8.2	7.8	2.2	7.9	5.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
DUF3149	PF11346.3	gi|289596406|ref|YP_003483102.1|	-	6.2	6.4	7.8	2.8	7.5	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3149)
DUF1469	PF07332.6	gi|289596406|ref|YP_003483102.1|	-	6.5	6.5	6.4	8.2	6.1	4.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF3955	PF13127.1	gi|289596406|ref|YP_003483102.1|	-	8.9	5.9	8.0	8.3	6.0	1.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
Hydrolase_like	PF13242.1	gi|289596407|ref|YP_003483103.1|	-	4.1e-08	32.8	0.0	7.4e-08	31.9	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|289596407|ref|YP_003483103.1|	-	4.8e-08	33.4	0.0	6.9e-08	32.8	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|289596407|ref|YP_003483103.1|	-	0.0069	16.8	0.3	0.015	15.7	0.2	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|289596407|ref|YP_003483103.1|	-	0.007	16.5	0.4	0.015	15.4	0.3	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.9	gi|289596407|ref|YP_003483103.1|	-	0.033	13.5	0.0	0.1	11.9	0.0	1.8	2	0	0	2	2	2	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Aminotran_1_2	PF00155.16	gi|289596408|ref|YP_003483104.1|	-	3.4e-66	223.6	0.0	4.1e-66	223.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|289596408|ref|YP_003483104.1|	-	1.3e-05	23.7	0.0	1.7e-05	23.2	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.14	gi|289596408|ref|YP_003483104.1|	-	0.0042	15.8	0.0	0.0061	15.3	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|289596408|ref|YP_003483104.1|	-	0.0044	16.2	0.0	0.034	13.3	0.0	2.2	1	1	0	1	1	1	1	Beta-eliminating	lyase
TIR_2	PF13676.1	gi|289596408|ref|YP_003483104.1|	-	0.15	12.2	0.1	6.9	6.8	0.0	2.6	2	0	0	2	2	2	0	TIR	domain
DegT_DnrJ_EryC1	PF01041.12	gi|289596408|ref|YP_003483104.1|	-	0.43	9.5	2.6	0.91	8.4	1.1	2.0	2	1	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Epimerase	PF01370.16	gi|289596409|ref|YP_003483105.1|	-	3.7e-30	105.0	0.0	5.1e-30	104.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|289596409|ref|YP_003483105.1|	-	1.6e-12	46.9	0.0	2.1e-12	46.5	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|289596409|ref|YP_003483105.1|	-	5.8e-12	44.8	0.0	8.4e-12	44.3	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|289596409|ref|YP_003483105.1|	-	2.2e-09	36.6	0.0	8.8e-08	31.3	0.0	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|289596409|ref|YP_003483105.1|	-	1.2e-06	27.6	0.0	2.3e-06	26.7	0.0	1.5	1	1	1	2	2	2	1	Male	sterility	protein
adh_short	PF00106.20	gi|289596409|ref|YP_003483105.1|	-	7.3e-06	26.0	0.0	5.1e-05	23.2	0.0	2.0	1	1	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|289596409|ref|YP_003483105.1|	-	0.00053	20.0	0.0	0.0011	19.0	0.0	1.5	2	0	0	2	2	2	1	NADH(P)-binding
KR	PF08659.5	gi|289596409|ref|YP_003483105.1|	-	0.0007	19.3	0.0	0.016	14.8	0.0	2.2	1	1	0	1	1	1	1	KR	domain
Epimerase_Csub	PF13950.1	gi|289596409|ref|YP_003483105.1|	-	0.0037	17.1	0.2	0.008	16.1	0.2	1.5	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
Asn_synthase	PF00733.16	gi|289596410|ref|YP_003483106.1|	-	6.5e-41	140.5	0.8	4.9e-40	137.6	0.6	1.9	1	1	0	1	1	1	1	Asparagine	synthase
NAD_synthase	PF02540.12	gi|289596410|ref|YP_003483106.1|	-	3.1e-05	23.0	0.1	0.0026	16.6	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
QueC	PF06508.8	gi|289596410|ref|YP_003483106.1|	-	0.0055	16.0	0.0	0.0093	15.2	0.0	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Arginosuc_synth	PF00764.14	gi|289596410|ref|YP_003483106.1|	-	0.015	14.3	0.0	0.025	13.6	0.0	1.3	1	0	0	1	1	1	0	Arginosuccinate	synthase
Cytidylate_kin2	PF13189.1	gi|289596410|ref|YP_003483106.1|	-	0.026	14.4	0.2	5.8	6.7	0.0	2.5	1	1	1	2	2	2	0	Cytidylate	kinase-like	family
ATP_bind_3	PF01171.15	gi|289596410|ref|YP_003483106.1|	-	0.077	12.4	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|289596410|ref|YP_003483106.1|	-	0.082	11.4	0.1	0.39	9.2	0.1	2.0	1	1	0	1	1	1	0	tRNA	methyl	transferase
tRNA-synt_2b	PF00587.20	gi|289596411|ref|YP_003483107.1|	-	4e-53	179.5	0.0	8.8e-53	178.4	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|289596411|ref|YP_003483107.1|	-	6.1e-21	74.1	0.0	1.9e-20	72.5	0.0	1.9	1	0	0	1	1	1	1	Anticodon	binding	domain
zinc_ribbon_5	PF13719.1	gi|289596411|ref|YP_003483107.1|	-	0.0016	17.9	2.0	0.011	15.2	0.1	2.7	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|289596411|ref|YP_003483107.1|	-	0.0046	16.6	2.0	0.029	14.0	0.1	2.6	2	0	0	2	2	2	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596411|ref|YP_003483107.1|	-	0.026	14.2	2.0	0.74	9.5	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
MotCF	PF09158.5	gi|289596411|ref|YP_003483107.1|	-	0.034	13.8	0.3	0.67	9.6	0.0	2.6	2	0	0	2	2	2	0	Bacteriophage	T4	MotA,	C-terminal
Zn-ribbon_8	PF09723.5	gi|289596411|ref|YP_003483107.1|	-	0.055	13.4	1.6	10	6.1	0.1	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|289596411|ref|YP_003483107.1|	-	0.1	11.8	0.7	12	5.2	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Terminase_GpA	PF05876.7	gi|289596411|ref|YP_003483107.1|	-	0.24	9.7	0.1	0.34	9.2	0.0	1.1	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
TF_Zn_Ribbon	PF08271.7	gi|289596411|ref|YP_003483107.1|	-	0.32	10.3	1.5	22	4.4	0.2	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-C2H2	PF00096.21	gi|289596411|ref|YP_003483107.1|	-	0.7	10.3	2.6	20	5.8	0.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
DNA_RNApol_7kD	PF03604.8	gi|289596411|ref|YP_003483107.1|	-	1	8.8	4.8	1.9	8.0	0.2	2.6	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TFIIS_C	PF01096.13	gi|289596411|ref|YP_003483107.1|	-	1.3	8.7	3.2	4.3	7.0	0.3	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
CBS	PF00571.23	gi|289596412|ref|YP_003483108.1|	-	2.8e-53	177.4	2.2	1.6e-13	50.1	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
PRC	PF05239.11	gi|289596412|ref|YP_003483108.1|	-	0.0023	17.7	1.4	0.48	10.3	0.3	2.8	3	1	0	3	3	3	2	PRC-barrel	domain
IF3_N	PF05198.11	gi|289596412|ref|YP_003483108.1|	-	0.019	14.8	0.0	23	4.9	0.0	3.4	3	0	0	3	3	3	0	Translation	initiation	factor	IF-3,	N-terminal	domain
HAD_2	PF13419.1	gi|289596413|ref|YP_003483109.1|	-	7.3e-33	114.2	0.0	8.5e-33	114.0	0.0	1.0	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.7	gi|289596413|ref|YP_003483109.1|	-	0.0022	17.2	0.0	0.0063	15.6	0.0	1.8	1	1	0	2	2	2	1	Putative	Phosphatase
Hydrolase_like	PF13242.1	gi|289596413|ref|YP_003483109.1|	-	0.02	14.6	0.0	0.062	13.0	0.0	1.8	2	0	0	2	2	2	0	HAD-hyrolase-like
PRD	PF00874.15	gi|289596413|ref|YP_003483109.1|	-	0.42	10.7	3.3	0.68	10.0	0.4	2.2	2	0	0	2	2	2	0	PRD	domain
Radical_SAM	PF04055.16	gi|289596414|ref|YP_003483110.1|	-	5.3e-17	62.4	0.2	1.4e-14	54.6	0.0	2.3	1	1	1	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289596414|ref|YP_003483110.1|	-	3.8e-11	43.2	0.3	2e-10	40.9	0.0	2.2	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289596414|ref|YP_003483110.1|	-	2.7e-10	40.2	0.3	1.2e-08	35.0	0.0	2.9	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|289596414|ref|YP_003483110.1|	-	4e-05	23.8	0.4	0.00011	22.4	0.3	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
CPSase_L_D2	PF02786.12	gi|289596414|ref|YP_003483110.1|	-	0.076	12.2	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Radical_SAM	PF04055.16	gi|289596415|ref|YP_003483111.1|	-	4.1e-09	36.8	0.3	5.5e-09	36.4	0.2	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596415|ref|YP_003483111.1|	-	0.099	12.6	0.1	0.23	11.4	0.1	1.6	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF1848	PF08902.6	gi|289596415|ref|YP_003483111.1|	-	0.12	11.9	6.3	2.4	7.6	2.3	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
DUF3727	PF12527.3	gi|289596415|ref|YP_003483111.1|	-	0.13	12.3	0.0	0.25	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3727)
Fer4_12	PF13353.1	gi|289596415|ref|YP_003483111.1|	-	0.15	12.1	0.5	0.35	10.9	0.3	1.8	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Arch_ATPase	PF01637.13	gi|289596416|ref|YP_003483112.1|	-	1.3e-13	51.2	6.2	3.8e-11	43.1	0.5	2.9	2	1	1	3	3	3	2	Archaeal	ATPase
AAA_14	PF13173.1	gi|289596416|ref|YP_003483112.1|	-	1.5e-11	44.3	0.4	7e-10	38.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
HTH_Crp_2	PF13545.1	gi|289596416|ref|YP_003483112.1|	-	2.5e-08	33.5	0.0	7.3e-08	32.0	0.0	1.8	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|289596416|ref|YP_003483112.1|	-	1.9e-06	27.7	0.3	4.3e-06	26.6	0.2	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|289596416|ref|YP_003483112.1|	-	9.9e-06	24.8	0.3	0.00024	20.4	0.0	3.0	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
AAA_16	PF13191.1	gi|289596416|ref|YP_003483112.1|	-	0.00016	21.6	0.0	0.00055	19.9	0.0	1.8	1	1	1	2	2	2	1	AAA	ATPase	domain
MarR_2	PF12802.2	gi|289596416|ref|YP_003483112.1|	-	0.00064	19.3	0.0	0.0021	17.6	0.0	1.9	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|289596416|ref|YP_003483112.1|	-	0.00069	19.6	0.1	0.0026	17.8	0.0	2.0	2	0	0	2	2	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|289596416|ref|YP_003483112.1|	-	0.00085	18.9	0.2	0.0049	16.5	0.0	2.4	2	1	0	2	2	1	1	Sugar-specific	transcriptional	regulator	TrmB
AAA_22	PF13401.1	gi|289596416|ref|YP_003483112.1|	-	0.001	19.1	0.1	0.0067	16.5	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
PadR	PF03551.9	gi|289596416|ref|YP_003483112.1|	-	0.0014	18.3	0.1	0.012	15.3	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
PH_3	PF14593.1	gi|289596416|ref|YP_003483112.1|	-	0.0019	18.0	1.1	0.0047	16.8	0.0	2.2	2	1	0	2	2	1	1	PH	domain
MarR	PF01047.17	gi|289596416|ref|YP_003483112.1|	-	0.0021	17.7	0.0	0.008	15.8	0.0	2.0	1	0	0	1	1	1	1	MarR	family
ABC_tran	PF00005.22	gi|289596416|ref|YP_003483112.1|	-	0.0055	16.9	0.0	0.022	15.0	0.0	2.2	1	1	0	1	1	1	1	ABC	transporter
DUF258	PF03193.11	gi|289596416|ref|YP_003483112.1|	-	0.0065	15.6	0.0	0.014	14.6	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_35	PF14516.1	gi|289596416|ref|YP_003483112.1|	-	0.01	14.4	0.0	0.023	13.3	0.0	1.6	1	0	0	1	1	1	0	AAA-like	domain
DUF3045	PF11243.3	gi|289596416|ref|YP_003483112.1|	-	0.012	15.8	0.5	0.039	14.1	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3045)
ATP-synt_ab	PF00006.20	gi|289596416|ref|YP_003483112.1|	-	0.012	15.1	0.5	0.15	11.5	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Crp	PF00325.15	gi|289596416|ref|YP_003483112.1|	-	0.022	14.2	0.0	0.052	13.0	0.0	1.7	2	0	0	2	2	1	0	Bacterial	regulatory	proteins,	crp	family
AAA	PF00004.24	gi|289596416|ref|YP_003483112.1|	-	0.029	14.5	0.1	0.099	12.8	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Miro	PF08477.8	gi|289596416|ref|YP_003483112.1|	-	0.032	14.7	0.4	0.59	10.6	0.0	2.5	2	1	0	2	2	2	0	Miro-like	protein
HTH_5	PF01022.15	gi|289596416|ref|YP_003483112.1|	-	0.036	13.7	2.3	1.1	8.9	0.0	3.5	4	0	0	4	4	3	0	Bacterial	regulatory	protein,	arsR	family
AAA_25	PF13481.1	gi|289596416|ref|YP_003483112.1|	-	0.04	13.3	0.0	0.15	11.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|289596416|ref|YP_003483112.1|	-	0.05	13.0	0.0	0.11	11.8	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Hydrolase_6	PF13344.1	gi|289596416|ref|YP_003483112.1|	-	0.053	13.4	0.1	5.7	6.8	0.1	2.4	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
HTH_11	PF08279.7	gi|289596416|ref|YP_003483112.1|	-	0.06	12.9	0.0	0.4	10.3	0.0	2.3	2	0	0	2	2	2	0	HTH	domain
GntR	PF00392.16	gi|289596416|ref|YP_003483112.1|	-	0.069	12.5	0.0	0.34	10.3	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
B-block_TFIIIC	PF04182.7	gi|289596416|ref|YP_003483112.1|	-	0.074	12.9	0.1	0.47	10.3	0.0	2.3	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
Topo-VIb_trans	PF09239.6	gi|289596417|ref|YP_003483113.1|	-	4.7e-64	214.7	0.0	9.6e-64	213.7	0.0	1.5	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.21	gi|289596417|ref|YP_003483113.1|	-	1.3e-10	41.0	0.0	2.7e-10	39.9	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|289596417|ref|YP_003483113.1|	-	2.4e-10	40.2	0.0	8.1e-10	38.4	0.0	1.8	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|289596417|ref|YP_003483113.1|	-	2.3e-05	23.1	0.1	5.9e-05	21.7	0.0	1.7	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
MAF_flag10	PF01973.13	gi|289596417|ref|YP_003483113.1|	-	0.028	13.9	0.0	0.086	12.3	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF115
TP6A_N	PF04406.9	gi|289596418|ref|YP_003483114.1|	-	3.3e-20	71.5	0.1	6.4e-20	70.5	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DMRL_synthase	PF00885.14	gi|289596420|ref|YP_003483116.1|	-	5.1e-37	126.7	0.2	5.6e-37	126.5	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Methyltransf_25	PF13649.1	gi|289596420|ref|YP_003483116.1|	-	0.057	13.7	0.0	0.092	13.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Pox_E6	PF04656.7	gi|289596420|ref|YP_003483116.1|	-	0.12	10.5	0.1	0.15	10.2	0.0	1.0	1	0	0	1	1	1	0	Pox	virus	E6	protein
DMRL_synthase	PF00885.14	gi|289596421|ref|YP_003483117.1|	-	1.7e-18	66.6	0.0	2e-18	66.4	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Nitro_FeMo-Co	PF02579.12	gi|289596421|ref|YP_003483117.1|	-	0.08	13.0	0.1	0.2	11.7	0.0	1.7	1	1	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
CTP_transf_2	PF01467.21	gi|289596422|ref|YP_003483118.1|	-	1.3e-13	51.2	0.3	2.8e-13	50.2	0.2	1.5	1	1	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|289596422|ref|YP_003483118.1|	-	0.0053	16.4	0.1	0.19	11.3	0.0	2.2	2	0	0	2	2	2	1	FAD	synthetase
DUF498	PF04430.9	gi|289596422|ref|YP_003483118.1|	-	0.13	11.8	0.0	0.18	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF498/DUF598)
DHBP_synthase	PF00926.14	gi|289596423|ref|YP_003483119.1|	-	2e-60	203.3	0.0	2.3e-60	203.1	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
Ammonium_transp	PF00909.16	gi|289596424|ref|YP_003483120.1|	-	6.7e-107	357.3	35.9	7.6e-107	357.2	24.9	1.0	1	0	0	1	1	1	1	Ammonium	Transporter	Family
DUF87	PF01935.12	gi|289596426|ref|YP_003483122.1|	-	4.1e-37	128.2	0.2	4.1e-37	128.2	0.2	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|289596426|ref|YP_003483122.1|	-	1.6e-18	67.2	0.0	4.1e-16	59.2	0.0	2.2	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|289596426|ref|YP_003483122.1|	-	0.0012	18.3	0.0	0.0029	17.1	0.0	1.6	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|289596426|ref|YP_003483122.1|	-	0.011	14.3	0.0	0.22	10.0	0.0	2.1	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF552	PF04472.7	gi|289596426|ref|YP_003483122.1|	-	0.012	15.5	0.1	0.034	14.0	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF552)
NurA	PF09376.5	gi|289596427|ref|YP_003483123.1|	-	0.0011	18.5	0.5	0.015	14.7	0.1	2.2	2	0	0	2	2	2	1	NurA	domain
TRAP_alpha	PF03896.11	gi|289596427|ref|YP_003483123.1|	-	0.086	11.8	0.0	0.13	11.2	0.0	1.1	1	0	0	1	1	1	0	Translocon-associated	protein	(TRAP),	alpha	subunit
Glyco_tranf_2_3	PF13641.1	gi|289596428|ref|YP_003483124.1|	-	2e-36	125.9	0.0	2.7e-36	125.5	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|289596428|ref|YP_003483124.1|	-	1e-25	90.6	0.3	1e-25	90.6	0.2	2.5	2	1	1	3	3	3	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|289596428|ref|YP_003483124.1|	-	1.3e-15	57.0	0.0	2.2e-15	56.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glycos_transf_2	PF00535.21	gi|289596428|ref|YP_003483124.1|	-	6e-15	55.3	0.0	9.5e-15	54.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Cellulose_synt	PF03552.9	gi|289596428|ref|YP_003483124.1|	-	1.4e-06	26.9	11.4	1.4e-06	26.9	7.9	2.3	2	1	1	3	3	3	1	Cellulose	synthase
Rubrerythrin	PF02915.12	gi|289596428|ref|YP_003483124.1|	-	0.081	13.2	3.4	0.18	12.1	2.3	1.7	1	0	0	1	1	1	0	Rubrerythrin
Curto_V2	PF07325.6	gi|289596428|ref|YP_003483124.1|	-	0.2	11.3	0.1	0.2	11.3	0.0	3.4	3	1	1	4	4	4	0	Curtovirus	V2	protein
Peptidase_M24	PF00557.19	gi|289596429|ref|YP_003483125.1|	-	2.6e-47	161.1	0.0	3e-47	160.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Sua5_yciO_yrdC	PF01300.13	gi|289596430|ref|YP_003483126.1|	-	1.5e-32	112.2	0.0	1.8e-32	112.0	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
Radical_SAM	PF04055.16	gi|289596431|ref|YP_003483127.1|	-	1.3e-25	90.5	0.1	1.1e-24	87.5	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|289596431|ref|YP_003483127.1|	-	1e-15	57.3	0.0	2.1e-15	56.3	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|289596431|ref|YP_003483127.1|	-	0.0004	20.1	0.1	0.00098	18.8	0.0	1.7	1	0	0	1	1	1	1	TRAM	domain
LEAP-2	PF07359.6	gi|289596431|ref|YP_003483127.1|	-	0.039	13.5	0.1	0.079	12.6	0.1	1.4	1	0	0	1	1	1	0	Liver-expressed	antimicrobial	peptide	2	precursor	(LEAP-2)
Phg_2220_C	PF09524.5	gi|289596431|ref|YP_003483127.1|	-	0.075	13.0	0.2	0.31	11.0	0.0	2.0	2	0	0	2	2	2	0	Conserved	phage	C-terminus	(Phg_2220_C)
DUF552	PF04472.7	gi|289596432|ref|YP_003483128.1|	-	4.6e-17	61.7	0.1	6.2e-17	61.2	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF552)
NAD_kinase	PF01513.16	gi|289596433|ref|YP_003483129.1|	-	8.7e-55	185.4	0.2	1e-54	185.2	0.2	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|289596433|ref|YP_003483129.1|	-	0.0014	18.0	0.1	0.0096	15.3	0.0	2.4	3	0	0	3	3	3	1	Diacylglycerol	kinase	catalytic	domain
DeoRC	PF00455.17	gi|289596433|ref|YP_003483129.1|	-	0.015	14.9	0.0	0.082	12.5	0.0	2.1	2	0	0	2	2	2	0	DeoR	C	terminal	sensor	domain
Peripla_BP_4	PF13407.1	gi|289596433|ref|YP_003483129.1|	-	0.053	12.8	0.0	0.083	12.2	0.0	1.4	1	1	0	1	1	1	0	Periplasmic	binding	protein	domain
QRPTase_C	PF01729.14	gi|289596433|ref|YP_003483129.1|	-	0.084	12.3	0.0	0.21	11.1	0.0	1.6	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Fe-ADH	PF00465.14	gi|289596433|ref|YP_003483129.1|	-	0.15	10.6	0.1	0.41	9.2	0.0	1.7	2	0	0	2	2	2	0	Iron-containing	alcohol	dehydrogenase
RrnaAD	PF00398.15	gi|289596434|ref|YP_003483130.1|	-	7e-57	192.4	0.0	8.6e-57	192.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|289596434|ref|YP_003483130.1|	-	1.6e-06	28.1	0.0	3.8e-06	26.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289596434|ref|YP_003483130.1|	-	6.8e-06	25.7	0.0	7.7e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289596434|ref|YP_003483130.1|	-	0.02	15.4	0.0	0.028	14.9	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|289596434|ref|YP_003483130.1|	-	0.021	14.5	0.0	0.04	13.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|289596434|ref|YP_003483130.1|	-	0.027	13.8	0.0	0.037	13.3	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Met_10	PF02475.11	gi|289596434|ref|YP_003483130.1|	-	0.042	13.4	0.0	0.079	12.5	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_11	PF08241.7	gi|289596434|ref|YP_003483130.1|	-	0.051	14.0	0.0	0.092	13.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|289596434|ref|YP_003483130.1|	-	0.069	12.1	0.0	0.13	11.2	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
PCMT	PF01135.14	gi|289596434|ref|YP_003483130.1|	-	0.089	12.3	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Pox_I5	PF04713.7	gi|289596435|ref|YP_003483131.1|	-	0.07	12.8	0.7	0.09	12.4	0.5	1.3	1	1	0	1	1	1	0	Poxvirus	protein	I5
PPC	PF04151.10	gi|289596436|ref|YP_003483132.1|	-	8.7e-07	29.8	12.2	0.00074	20.4	0.5	3.6	3	0	0	3	3	3	2	Bacterial	pre-peptidase	C-terminal	domain
ODV-E18	PF10717.4	gi|289596436|ref|YP_003483132.1|	-	0.00014	21.2	0.1	0.00028	20.2	0.1	1.5	1	0	0	1	1	1	1	Occlusion-derived	virus	envelope	protein	ODV-E18
CUB_2	PF02408.15	gi|289596436|ref|YP_003483132.1|	-	0.00045	19.7	4.6	1	8.9	0.1	3.6	3	1	0	3	3	3	2	CUB-like	domain
DUF756	PF05506.7	gi|289596436|ref|YP_003483132.1|	-	0.0009	19.6	0.1	2.7	8.5	0.0	4.1	1	1	2	3	3	3	1	Domain	of	unknown	function	(DUF756)
Rifin_STEVOR	PF02009.11	gi|289596436|ref|YP_003483132.1|	-	0.0021	17.7	0.7	0.0029	17.2	0.5	1.2	1	0	0	1	1	1	1	Rifin/stevor	family
MpPF26	PF07666.6	gi|289596436|ref|YP_003483132.1|	-	0.0065	16.3	1.7	0.0065	16.3	1.2	2.3	2	0	0	2	2	2	1	M	penetrans	paralogue	family	26
EXOSC1	PF10447.4	gi|289596436|ref|YP_003483132.1|	-	0.013	15.4	0.0	2.9	7.8	0.0	2.5	2	0	0	2	2	2	0	Exosome	component	EXOSC1/CSL4
DUF3244	PF11589.3	gi|289596436|ref|YP_003483132.1|	-	0.025	14.2	0.2	2.9	7.6	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3244)
Baculo_11_kDa	PF06143.6	gi|289596436|ref|YP_003483132.1|	-	0.063	12.6	0.6	0.12	11.7	0.4	1.4	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
ASFV_J13L	PF05568.6	gi|289596436|ref|YP_003483132.1|	-	0.089	12.3	1.0	0.24	10.9	0.7	1.7	1	0	0	1	1	1	0	African	swine	fever	virus	J13L	protein
DUF1206	PF06724.6	gi|289596436|ref|YP_003483132.1|	-	0.1	12.3	1.2	2.5	7.9	0.0	2.3	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
DUF1467	PF07330.7	gi|289596436|ref|YP_003483132.1|	-	0.62	9.8	3.9	3.3	7.5	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1467)
7TM_GPCR_Srd	PF10317.4	gi|289596436|ref|YP_003483132.1|	-	1.4	7.8	7.7	0.042	12.8	1.0	1.5	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srd
Antitoxin-MazE	PF04014.13	gi|289596437|ref|YP_003483133.1|	-	5.4e-05	22.8	0.3	6.2e-05	22.6	0.2	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF655	PF04919.7	gi|289596438|ref|YP_003483134.1|	-	1.3e-72	243.3	2.9	1.4e-72	243.1	2.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|289596438|ref|YP_003483134.1|	-	1.2e-06	28.4	0.0	4.1e-06	26.7	0.0	1.8	1	1	1	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|289596438|ref|YP_003483134.1|	-	6.6e-05	22.7	0.0	0.00023	21.0	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.11	gi|289596439|ref|YP_003483135.1|	-	6.5e-13	48.7	2.4	8.7e-13	48.3	1.7	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
DUF4599	PF15371.1	gi|289596439|ref|YP_003483135.1|	-	0.076	13.0	0.2	0.11	12.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4599)
Phage_Nu1	PF07471.7	gi|289596439|ref|YP_003483135.1|	-	0.12	11.8	0.3	0.14	11.6	0.2	1.3	1	0	0	1	1	1	0	Phage	DNA	packaging	protein	Nu1
Ribosomal_L21e	PF01157.13	gi|289596440|ref|YP_003483136.1|	-	2.8e-27	94.4	5.1	3.1e-27	94.2	3.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
DDE_Tnp_1	PF01609.16	gi|289596441|ref|YP_003483137.1|	-	7.7e-20	71.3	0.3	1.6e-19	70.2	0.2	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596441|ref|YP_003483137.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596441|ref|YP_003483137.1|	-	0.0014	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|289596441|ref|YP_003483137.1|	-	0.092	12.9	2.1	0.26	11.4	0.4	2.3	2	1	0	2	2	2	0	Transposase	DDE	domain
HTH_38	PF13936.1	gi|289596441|ref|YP_003483137.1|	-	0.096	12.2	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
UbiD	PF01977.11	gi|289596442|ref|YP_003483138.1|	-	1.7e-93	313.3	0.0	2.1e-93	313.0	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
PROCN	PF08083.6	gi|289596442|ref|YP_003483138.1|	-	0.14	10.6	0.0	0.2	10.0	0.0	1.1	1	0	0	1	1	1	0	PROCN	(NUC071)	domain
ATP_bind_3	PF01171.15	gi|289596443|ref|YP_003483139.1|	-	4.8e-17	62.0	0.0	1.4e-16	60.5	0.0	1.7	1	1	1	2	2	2	1	PP-loop	family
PAPS_reduct	PF01507.14	gi|289596443|ref|YP_003483139.1|	-	1.1e-07	31.8	0.0	2.2e-07	30.8	0.0	1.5	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
tRNA_Me_trans	PF03054.11	gi|289596443|ref|YP_003483139.1|	-	5.6e-05	21.8	0.0	0.00021	19.9	0.0	1.8	1	1	0	1	1	1	1	tRNA	methyl	transferase
RecR	PF02132.10	gi|289596443|ref|YP_003483139.1|	-	0.0025	17.2	2.0	0.0025	17.2	1.4	2.9	3	0	0	3	3	3	1	RecR	protein
Asn_synthase	PF00733.16	gi|289596443|ref|YP_003483139.1|	-	0.004	16.6	0.0	0.0055	16.2	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|289596443|ref|YP_003483139.1|	-	0.022	14.0	0.0	0.047	12.9	0.0	1.5	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
Arginosuc_synth	PF00764.14	gi|289596443|ref|YP_003483139.1|	-	0.028	13.4	0.0	0.04	12.9	0.0	1.2	1	0	0	1	1	1	0	Arginosuccinate	synthase
zf-C4	PF00105.13	gi|289596443|ref|YP_003483139.1|	-	0.13	12.4	0.1	0.13	12.4	0.1	3.6	5	0	0	5	5	5	0	Zinc	finger,	C4	type	(two	domains)
RNase_P_Rpp14	PF01900.14	gi|289596444|ref|YP_003483140.1|	-	0.0022	17.8	0.3	0.046	13.6	0.2	2.2	1	1	0	1	1	1	1	Rpp14/Pop5	family
PcrB	PF01884.12	gi|289596445|ref|YP_003483141.1|	-	4.6e-80	268.1	4.0	5.5e-80	267.9	2.8	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|289596445|ref|YP_003483141.1|	-	4.9e-09	35.8	0.6	4.1e-08	32.7	0.1	2.1	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|289596445|ref|YP_003483141.1|	-	4.5e-05	22.6	0.6	4.5e-05	22.6	0.4	2.5	2	1	1	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
DHO_dh	PF01180.16	gi|289596445|ref|YP_003483141.1|	-	0.0001	21.3	0.4	0.00055	18.9	0.1	2.0	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
G3P_antiterm	PF04309.7	gi|289596445|ref|YP_003483141.1|	-	0.00012	21.1	2.3	0.00036	19.6	0.1	2.3	2	1	1	3	3	3	1	Glycerol-3-phosphate	responsive	antiterminator
Trp_syntA	PF00290.15	gi|289596445|ref|YP_003483141.1|	-	0.0002	20.0	0.6	0.00052	18.6	0.2	1.8	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
Dus	PF01207.12	gi|289596445|ref|YP_003483141.1|	-	0.0019	17.0	0.3	0.065	12.0	0.1	2.2	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
TMP-TENI	PF02581.12	gi|289596445|ref|YP_003483141.1|	-	0.0024	17.0	0.2	0.0091	15.1	0.1	1.8	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase/TENI
NanE	PF04131.9	gi|289596445|ref|YP_003483141.1|	-	0.0038	16.2	0.9	0.31	9.9	0.1	2.4	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
FMN_dh	PF01070.13	gi|289596445|ref|YP_003483141.1|	-	0.0075	15.1	0.1	0.016	14.1	0.0	1.7	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
Ribul_P_3_epim	PF00834.14	gi|289596445|ref|YP_003483141.1|	-	0.0082	15.2	0.1	0.015	14.3	0.1	1.4	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
NMO	PF03060.10	gi|289596445|ref|YP_003483141.1|	-	0.035	13.2	1.4	0.085	11.9	0.3	2.0	2	0	0	2	2	2	0	Nitronate	monooxygenase
IMPDH	PF00478.20	gi|289596445|ref|YP_003483141.1|	-	0.035	12.9	0.5	0.099	11.5	0.4	1.7	1	1	1	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF1355	PF07090.6	gi|289596445|ref|YP_003483141.1|	-	0.046	13.1	0.0	0.076	12.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1355)
CdhD	PF03599.11	gi|289596445|ref|YP_003483141.1|	-	0.053	12.0	0.8	2.5	6.5	0.0	2.2	2	0	0	2	2	2	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
DUF561	PF04481.7	gi|289596445|ref|YP_003483141.1|	-	0.056	12.3	1.3	0.076	11.9	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
UbiA	PF01040.13	gi|289596446|ref|YP_003483142.1|	-	4.8e-36	124.3	14.5	5.4e-36	124.1	10.0	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Radical_SAM	PF04055.16	gi|289596447|ref|YP_003483143.1|	-	3.1e-07	30.7	0.1	3.1e-06	27.4	0.0	2.2	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596447|ref|YP_003483143.1|	-	0.00027	20.9	0.0	0.00062	19.7	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF512	PF04459.7	gi|289596447|ref|YP_003483143.1|	-	0.11	11.5	0.0	0.29	10.1	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF512)
Oxidored_q1	PF00361.15	gi|289596448|ref|YP_003483144.1|	-	3.8e-33	114.9	25.6	3.8e-33	114.9	17.7	2.8	2	0	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q6	PF01058.17	gi|289596449|ref|YP_003483145.1|	-	4.9e-14	52.0	0.1	2.5e-11	43.3	0.1	2.3	1	1	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4_12	PF13353.1	gi|289596449|ref|YP_003483145.1|	-	0.039	14.0	2.1	0.2	11.7	1.5	1.9	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Complex1_49kDa	PF00346.14	gi|289596450|ref|YP_003483146.1|	-	2.5e-11	43.1	0.0	6.6e-11	41.7	0.0	1.6	1	1	1	2	2	2	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
SAB	PF04382.8	gi|289596450|ref|YP_003483146.1|	-	0.12	12.0	0.3	0.35	10.5	0.0	1.8	2	0	0	2	2	2	0	SAB	domain
Oxidored_q1	PF00361.15	gi|289596451|ref|YP_003483147.1|	-	1.5e-36	126.0	22.5	1.5e-36	126.0	15.6	2.6	2	1	0	3	3	3	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_C	PF01010.14	gi|289596452|ref|YP_003483148.1|	-	0.017	14.6	1.6	0.025	14.0	1.1	1.2	1	0	0	1	1	1	0	NADH-Ubiquinone	oxidoreductase	(complex	I)	subunit	C-terminus
YwiC	PF14256.1	gi|289596452|ref|YP_003483148.1|	-	1.6	8.8	10.8	0.47	10.5	5.1	1.9	1	1	1	2	2	2	0	YwiC-like	protein
NADHdh	PF00146.16	gi|289596453|ref|YP_003483149.1|	-	1.4e-13	50.5	18.0	1.9e-13	50.2	12.5	1.1	1	0	0	1	1	1	1	NADH	dehydrogenase
NosD	PF05048.8	gi|289596454|ref|YP_003483150.1|	-	4.3e-32	111.1	59.1	6e-30	104.1	23.8	5.0	3	2	3	6	6	4	2	Periplasmic	copper-binding	protein	(NosD)
Big_3_4	PF13754.1	gi|289596454|ref|YP_003483150.1|	-	1.9e-31	108.1	29.4	2.4e-09	37.3	0.3	8.0	8	0	0	8	8	8	5	Bacterial	Ig-like	domain	(group	3)
SWM_repeat	PF13753.1	gi|289596454|ref|YP_003483150.1|	-	8.1e-14	51.3	33.2	2.8e-11	43.0	6.1	4.8	3	1	2	5	5	5	2	Putative	flagellar	system-associated	repeat
Y_Y_Y	PF07495.8	gi|289596454|ref|YP_003483150.1|	-	3.3e-13	49.1	24.3	0.00063	19.4	0.4	5.3	5	0	0	5	5	4	4	Y_Y_Y	domain
Beta_helix	PF13229.1	gi|289596454|ref|YP_003483150.1|	-	1.8e-10	40.7	56.2	4e-07	29.9	17.5	6.5	3	2	1	4	4	3	2	Right	handed	beta	helix	region
Big_3_2	PF12245.3	gi|289596454|ref|YP_003483150.1|	-	2.3e-06	27.0	2.2	0.56	9.8	0.1	5.0	4	0	0	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
DUF4625	PF15418.1	gi|289596454|ref|YP_003483150.1|	-	5.6e-06	26.5	10.6	5.1	7.2	0.0	6.9	2	2	3	5	5	5	2	Domain	of	unknown	function	(DUF4625)
BiPBP_C	PF06832.7	gi|289596454|ref|YP_003483150.1|	-	1.9e-05	24.4	0.0	2.2	8.2	0.0	4.8	6	0	0	6	6	6	2	Penicillin-Binding	Protein	C-terminus	Family
DUF4399	PF14347.1	gi|289596454|ref|YP_003483150.1|	-	2.5e-05	24.1	0.8	1.1	9.3	0.0	4.8	4	1	1	5	5	5	1	Domain	of	unknown	function	(DUF4399)
HYR	PF02494.11	gi|289596454|ref|YP_003483150.1|	-	0.0025	17.8	24.1	0.35	10.8	0.5	7.6	2	1	4	6	6	6	2	HYR	domain
DUF1191	PF06697.7	gi|289596454|ref|YP_003483150.1|	-	0.0062	15.3	1.3	0.011	14.5	0.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1191)
PolyG_pol	PF01518.11	gi|289596454|ref|YP_003483150.1|	-	0.007	14.8	0.1	0.15	10.5	0.0	2.2	2	0	0	2	2	2	1	Sigma	NS	protein
FAM176	PF14851.1	gi|289596454|ref|YP_003483150.1|	-	0.019	14.6	0.1	0.034	13.8	0.1	1.3	1	0	0	1	1	1	0	FAM176	family
OAD_gamma	PF04277.8	gi|289596454|ref|YP_003483150.1|	-	0.042	14.2	0.6	0.084	13.2	0.4	1.6	1	0	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
Adeno_E1B_55K	PF01696.12	gi|289596454|ref|YP_003483150.1|	-	0.077	11.4	0.4	0.13	10.6	0.3	1.2	1	0	0	1	1	1	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
Conotoxin	PF02950.12	gi|289596454|ref|YP_003483150.1|	-	0.71	10.7	0.1	6.7	7.5	0.0	2.2	2	0	0	2	2	2	0	Conotoxin
Spore_YhaL	PF14147.1	gi|289596454|ref|YP_003483150.1|	-	3.1	7.2	5.8	3.7	7.0	1.5	2.3	2	0	0	2	2	2	0	Sporulation	protein	YhaL
PNP_UDP_1	PF01048.15	gi|289596455|ref|YP_003483151.1|	-	3.5e-38	130.8	0.0	4.2e-38	130.6	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF950	PF06106.6	gi|289596455|ref|YP_003483151.1|	-	0.013	15.5	0.1	0.026	14.5	0.1	1.5	1	0	0	1	1	1	0	Staphylococcus	protein	of	unknown	function	(DUF950)
PSDC	PF12588.3	gi|289596455|ref|YP_003483151.1|	-	0.02	14.5	0.0	0.027	14.0	0.0	1.2	1	0	0	1	1	1	0	Phophatidylserine	decarboxylase
GCHY-1	PF02649.9	gi|289596456|ref|YP_003483152.1|	-	4.6e-82	275.3	0.2	5.2e-82	275.1	0.1	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
FolB	PF02152.13	gi|289596456|ref|YP_003483152.1|	-	0.0026	17.9	1.1	0.65	10.1	0.0	2.4	2	0	0	2	2	2	2	Dihydroneopterin	aldolase
EKR	PF10371.4	gi|289596456|ref|YP_003483152.1|	-	0.039	13.5	0.2	8.6	6.0	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function
REF	PF05755.7	gi|289596456|ref|YP_003483152.1|	-	0.085	12.5	3.5	0.61	9.7	0.0	2.7	2	1	0	2	2	2	0	Rubber	elongation	factor	protein	(REF)
DUF3510	PF12022.3	gi|289596456|ref|YP_003483152.1|	-	0.092	12.8	0.7	0.51	10.4	0.1	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3510)
Peptidase_M16	PF00675.15	gi|289596457|ref|YP_003483153.1|	-	2.4e-18	66.3	0.0	2e-17	63.3	0.0	2.0	2	0	0	2	2	2	1	Insulinase	(Peptidase	family	M16)
Peptidase_M16_C	PF05193.16	gi|289596457|ref|YP_003483153.1|	-	2.7e-08	33.6	0.0	1e-06	28.5	0.0	2.2	1	1	0	1	1	1	1	Peptidase	M16	inactive	domain
ABC_tran	PF00005.22	gi|289596459|ref|YP_003483155.1|	-	3.8e-22	79.0	0.0	7.1e-22	78.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596459|ref|YP_003483155.1|	-	2.7e-15	57.1	12.1	3.8e-10	40.2	0.9	2.9	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|289596459|ref|YP_003483155.1|	-	1.4e-06	27.5	3.2	0.0075	15.3	0.2	2.4	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|289596459|ref|YP_003483155.1|	-	4.3e-06	27.2	2.0	9.2e-06	26.1	1.1	1.7	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|289596459|ref|YP_003483155.1|	-	0.00019	20.7	0.1	0.12	11.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.16	gi|289596459|ref|YP_003483155.1|	-	0.0014	17.8	0.0	0.0035	16.5	0.0	1.6	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_29	PF13555.1	gi|289596459|ref|YP_003483155.1|	-	0.0032	16.9	0.0	0.006	16.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|289596459|ref|YP_003483155.1|	-	0.0035	17.6	2.3	0.0068	16.7	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|289596459|ref|YP_003483155.1|	-	0.0057	16.8	0.0	0.016	15.4	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|289596459|ref|YP_003483155.1|	-	0.0057	16.5	0.0	0.011	15.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|289596459|ref|YP_003483155.1|	-	0.006	16.0	0.3	0.013	14.9	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|289596459|ref|YP_003483155.1|	-	0.0088	15.6	0.2	0.08	12.5	0.0	2.5	3	0	0	3	3	3	1	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|289596459|ref|YP_003483155.1|	-	0.012	15.3	0.2	0.034	13.8	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|289596459|ref|YP_003483155.1|	-	0.013	16.2	3.0	0.032	15.0	2.0	1.9	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|289596459|ref|YP_003483155.1|	-	0.03	13.5	0.0	0.047	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|289596459|ref|YP_003483155.1|	-	0.034	14.2	0.4	0.16	12.1	0.3	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|289596459|ref|YP_003483155.1|	-	0.09	12.7	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
MMR_HSR1	PF01926.18	gi|289596459|ref|YP_003483155.1|	-	0.097	12.6	0.3	0.19	11.6	0.2	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|289596459|ref|YP_003483155.1|	-	0.12	11.7	0.0	0.25	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|289596459|ref|YP_003483155.1|	-	0.13	11.8	0.0	0.25	10.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ABC2_membrane_2	PF12679.2	gi|289596460|ref|YP_003483156.1|	-	6.6e-09	35.0	20.2	6.6e-09	35.0	14.0	1.8	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|289596460|ref|YP_003483156.1|	-	3e-08	33.1	44.1	4.4e-08	32.5	30.6	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ThiC	PF01964.13	gi|289596462|ref|YP_003483158.1|	-	2.1e-187	622.8	0.4	2.3e-187	622.6	0.3	1.0	1	0	0	1	1	1	1	ThiC	family
DUF3606	PF12244.3	gi|289596462|ref|YP_003483158.1|	-	0.028	14.0	0.1	0.12	11.9	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3606)
Rhomboid	PF01694.17	gi|289596463|ref|YP_003483159.1|	-	1.7e-22	80.0	18.7	1.7e-22	80.0	12.9	1.7	2	0	0	2	2	2	1	Rhomboid	family
DUF454	PF04304.8	gi|289596463|ref|YP_003483159.1|	-	6.6	6.8	9.3	1.2	9.2	0.2	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF454)
RTC	PF01137.16	gi|289596464|ref|YP_003483160.1|	-	1e-78	263.2	0.1	1.3e-78	262.9	0.1	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|289596464|ref|YP_003483160.1|	-	2.7e-08	33.7	0.1	7.2e-08	32.3	0.0	1.8	1	1	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
NCD1	PF04904.8	gi|289596464|ref|YP_003483160.1|	-	0.041	13.6	0.1	0.08	12.6	0.0	1.4	1	0	0	1	1	1	0	NAB	conserved	region	1	(NCD1)
PAC2	PF09754.4	gi|289596465|ref|YP_003483161.1|	-	2.2e-36	125.7	0.1	2.5e-36	125.5	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
CTP_synth_N	PF06418.9	gi|289596466|ref|YP_003483162.1|	-	4.5e-132	439.2	0.8	5.9e-132	438.8	0.6	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|289596466|ref|YP_003483162.1|	-	2e-50	170.9	0.0	5.5e-50	169.4	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|289596466|ref|YP_003483162.1|	-	2.2e-09	37.0	0.0	2.4e-08	33.7	0.0	2.1	1	1	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|289596466|ref|YP_003483162.1|	-	3.2e-08	33.2	0.0	4.6e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArgK	PF03308.11	gi|289596466|ref|YP_003483162.1|	-	0.093	11.4	0.3	0.17	10.6	0.2	1.3	1	0	0	1	1	1	0	ArgK	protein
Glycos_transf_1	PF00534.15	gi|289596467|ref|YP_003483163.1|	-	1.1e-42	145.3	0.0	1.6e-42	144.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|289596467|ref|YP_003483163.1|	-	5.8e-18	65.3	0.0	1.2e-17	64.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|289596467|ref|YP_003483163.1|	-	5.5e-13	49.0	0.1	1.5e-12	47.6	0.1	1.7	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|289596467|ref|YP_003483163.1|	-	6.1e-12	45.6	0.0	1.2e-11	44.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|289596467|ref|YP_003483163.1|	-	3.7e-11	43.4	0.0	1.5e-10	41.4	0.0	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.1	gi|289596467|ref|YP_003483163.1|	-	2.8e-05	23.9	1.0	6.9e-05	22.7	0.3	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Epimerase_2	PF02350.14	gi|289596467|ref|YP_003483163.1|	-	0.0018	17.0	0.0	0.0048	15.7	0.0	1.6	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_transf_5	PF08323.6	gi|289596467|ref|YP_003483163.1|	-	0.0091	15.5	0.5	0.21	11.0	0.2	2.2	1	1	1	2	2	2	1	Starch	synthase	catalytic	domain
DDE_Tnp_1	PF01609.16	gi|289596468|ref|YP_003483164.1|	-	1.7e-19	70.2	0.4	1.7e-19	70.2	0.3	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596468|ref|YP_003483164.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596468|ref|YP_003483164.1|	-	0.0013	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
Phage_GPA	PF05840.8	gi|289596468|ref|YP_003483164.1|	-	0.075	11.7	0.2	0.11	11.1	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
HTH_38	PF13936.1	gi|289596468|ref|YP_003483164.1|	-	0.092	12.3	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDE_Tnp_1_2	PF13586.1	gi|289596468|ref|YP_003483164.1|	-	0.093	12.9	2.1	0.26	11.4	0.4	2.4	2	1	0	2	2	2	0	Transposase	DDE	domain
SBP_bac_5	PF00496.17	gi|289596469|ref|YP_003483165.1|	-	3.2e-71	240.1	8.0	9.3e-71	238.6	5.6	1.9	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Big_1	PF02369.11	gi|289596469|ref|YP_003483165.1|	-	6.3e-21	74.1	39.2	1.5e-08	34.4	0.9	8.2	7	2	0	7	7	7	4	Bacterial	Ig-like	domain	(group	1)
MG1	PF11974.3	gi|289596469|ref|YP_003483165.1|	-	3.2e-08	34.0	5.2	0.22	12.0	0.0	6.0	6	0	0	6	6	6	2	Alpha-2-macroglobulin	MG1	domain
CarboxypepD_reg	PF13620.1	gi|289596469|ref|YP_003483165.1|	-	8.8e-08	32.1	32.7	0.064	13.3	0.2	8.1	8	1	0	8	8	6	4	Carboxypeptidase	regulatory-like	domain
DUF824	PF05688.6	gi|289596469|ref|YP_003483165.1|	-	3.5e-05	23.3	18.6	0.0044	16.6	0.4	5.3	5	0	0	5	5	5	2	Salmonella	repeat	of	unknown	function	(DUF824)
DUF4480	PF13715.1	gi|289596469|ref|YP_003483165.1|	-	4.7e-05	23.3	18.7	0.7	9.9	0.0	6.3	5	2	0	5	5	5	3	Domain	of	unknown	function	(DUF4480)
SpoIIIAH	PF12685.2	gi|289596469|ref|YP_003483165.1|	-	0.00061	19.3	1.0	0.00061	19.3	0.7	2.6	3	0	0	3	3	2	1	SpoIIIAH-like	protein
MscS_porin	PF12795.2	gi|289596469|ref|YP_003483165.1|	-	0.0012	18.2	4.2	0.0023	17.3	2.9	1.4	1	0	0	1	1	1	1	Mechanosensitive	ion	channel	porin	domain
IncA	PF04156.9	gi|289596469|ref|YP_003483165.1|	-	0.0014	18.2	8.2	0.086	12.4	1.9	2.3	1	1	1	2	2	2	2	IncA	protein
EMP24_GP25L	PF01105.19	gi|289596469|ref|YP_003483165.1|	-	0.0022	17.7	0.0	0.0022	17.7	0.0	2.4	3	0	0	3	3	2	1	emp24/gp25L/p24	family/GOLD
V-ATPase_C	PF03223.10	gi|289596469|ref|YP_003483165.1|	-	0.0037	16.2	0.0	0.0045	15.9	0.0	1.2	1	0	0	1	1	1	1	V-ATPase	subunit	C
ATG16	PF08614.6	gi|289596469|ref|YP_003483165.1|	-	0.0044	16.8	2.9	0.0085	15.9	2.0	1.3	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
SlyX	PF04102.7	gi|289596469|ref|YP_003483165.1|	-	0.017	15.4	1.8	0.043	14.1	1.2	1.6	1	0	0	1	1	1	0	SlyX
Peptidase_M56	PF05569.6	gi|289596469|ref|YP_003483165.1|	-	0.037	12.9	0.3	0.072	12.0	0.2	1.4	1	0	0	1	1	1	0	BlaR1	peptidase	M56
TRAP_alpha	PF03896.11	gi|289596469|ref|YP_003483165.1|	-	0.054	12.4	2.6	0.11	11.4	1.8	1.5	1	0	0	1	1	1	0	Translocon-associated	protein	(TRAP),	alpha	subunit
Nup54	PF13874.1	gi|289596469|ref|YP_003483165.1|	-	0.097	12.3	0.6	0.19	11.3	0.4	1.5	1	0	0	1	1	1	0	Nucleoporin	complex	subunit	54
OAD_gamma	PF04277.8	gi|289596469|ref|YP_003483165.1|	-	0.11	12.8	0.2	0.28	11.5	0.1	1.6	1	0	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
Fib_alpha	PF08702.5	gi|289596469|ref|YP_003483165.1|	-	0.16	12.0	2.2	0.34	11.0	1.5	1.5	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Bap31	PF05529.7	gi|289596469|ref|YP_003483165.1|	-	0.34	10.3	2.8	2.8	7.3	0.0	2.2	2	0	0	2	2	2	0	B-cell	receptor-associated	protein	31-like
DUF4407	PF14362.1	gi|289596469|ref|YP_003483165.1|	-	0.39	9.6	1.7	0.72	8.7	1.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF4446	PF14584.1	gi|289596469|ref|YP_003483165.1|	-	0.83	9.4	4.7	17	5.1	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
AATF-Che1	PF13339.1	gi|289596469|ref|YP_003483165.1|	-	0.84	9.7	3.9	1.6	8.9	2.7	1.3	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
DUF912	PF06024.7	gi|289596469|ref|YP_003483165.1|	-	1.3	9.1	5.8	1.7	8.7	3.3	1.8	1	1	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DivIC	PF04977.10	gi|289596469|ref|YP_003483165.1|	-	2.7	7.5	11.0	0.062	12.7	2.5	2.1	3	0	0	3	3	2	0	Septum	formation	initiator
FliD_N	PF02465.13	gi|289596469|ref|YP_003483165.1|	-	3.4	8.0	9.9	2.4	8.5	2.5	3.2	3	0	0	3	3	3	0	Flagellar	hook-associated	protein	2	N-terminus
B5	PF03484.10	gi|289596470|ref|YP_003483166.1|	-	1.5e-19	69.5	0.5	1.5e-19	69.5	0.4	3.2	4	0	0	4	4	4	1	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|289596470|ref|YP_003483166.1|	-	1.9e-15	56.7	0.1	3.5e-15	55.8	0.0	1.4	1	0	0	1	1	1	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|289596470|ref|YP_003483166.1|	-	0.0031	16.7	0.1	0.013	14.6	0.1	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
RadC	PF04002.10	gi|289596470|ref|YP_003483166.1|	-	0.11	12.2	0.0	1.4	8.5	0.0	2.3	2	0	0	2	2	2	0	RadC-like	JAB	domain
DNA_processg_A	PF02481.10	gi|289596471|ref|YP_003483167.1|	-	6.9e-07	28.3	0.4	2.7e-05	23.1	0.1	2.0	1	1	1	2	2	2	2	DNA	recombination-mediator	protein	A
Lysine_decarbox	PF03641.9	gi|289596471|ref|YP_003483167.1|	-	9.2e-06	25.5	0.0	1.6e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.10	gi|289596471|ref|YP_003483167.1|	-	0.019	14.8	0.0	0.025	14.4	0.0	1.3	1	0	0	1	1	1	0	Nucleoside	2-deoxyribosyltransferase
tRNA_anti-codon	PF01336.20	gi|289596472|ref|YP_003483168.1|	-	1.6e-05	24.6	0.1	2.1e-05	24.2	0.1	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
L31	PF09784.4	gi|289596472|ref|YP_003483168.1|	-	0.053	13.5	0.3	0.098	12.7	0.1	1.5	2	0	0	2	2	2	0	Mitochondrial	ribosomal	protein	L31
KaiC	PF06745.8	gi|289596473|ref|YP_003483169.1|	-	6.7e-25	87.5	0.0	1.1e-24	86.7	0.0	1.3	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596473|ref|YP_003483169.1|	-	2.2e-09	37.0	0.0	3.1e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289596473|ref|YP_003483169.1|	-	2.2e-05	24.3	0.0	7.3e-05	22.6	0.0	1.8	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|289596473|ref|YP_003483169.1|	-	2.9e-05	23.7	0.2	0.00015	21.4	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|289596473|ref|YP_003483169.1|	-	0.00028	20.6	0.0	0.00047	19.9	0.0	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
GvpD	PF07088.6	gi|289596473|ref|YP_003483169.1|	-	0.00035	19.0	0.0	0.0022	16.3	0.0	1.9	2	0	0	2	2	2	1	GvpD	gas	vesicle	protein
AAA_22	PF13401.1	gi|289596473|ref|YP_003483169.1|	-	0.00067	19.8	0.0	0.0019	18.3	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|289596473|ref|YP_003483169.1|	-	0.00082	19.5	0.1	0.014	15.5	0.1	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DnaB_C	PF03796.10	gi|289596473|ref|YP_003483169.1|	-	0.0017	17.3	0.0	0.0026	16.7	0.0	1.3	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_19	PF13245.1	gi|289596473|ref|YP_003483169.1|	-	0.0023	17.6	0.0	0.012	15.3	0.0	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|289596473|ref|YP_003483169.1|	-	0.0032	16.9	0.0	0.0063	15.9	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Zot	PF05707.7	gi|289596473|ref|YP_003483169.1|	-	0.0045	16.4	0.0	0.0086	15.5	0.0	1.5	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_17	PF13207.1	gi|289596473|ref|YP_003483169.1|	-	0.0054	17.5	0.0	0.017	15.9	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
PPV_E1_C	PF00519.12	gi|289596473|ref|YP_003483169.1|	-	0.0088	14.7	0.0	0.013	14.1	0.0	1.2	1	0	0	1	1	1	1	Papillomavirus	helicase
CobU	PF02283.11	gi|289596473|ref|YP_003483169.1|	-	0.014	14.8	0.0	4.1	6.7	0.0	2.2	2	0	0	2	2	2	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_31	PF13614.1	gi|289596473|ref|YP_003483169.1|	-	0.014	15.3	0.0	0.16	11.9	0.0	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|289596473|ref|YP_003483169.1|	-	0.017	14.9	0.0	0.021	14.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|289596473|ref|YP_003483169.1|	-	0.02	14.4	0.0	0.035	13.6	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.11	gi|289596473|ref|YP_003483169.1|	-	0.031	13.5	0.0	0.093	11.9	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
AAA_23	PF13476.1	gi|289596473|ref|YP_003483169.1|	-	0.035	14.4	0.4	0.053	13.8	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
DAP3	PF10236.4	gi|289596473|ref|YP_003483169.1|	-	0.042	12.7	0.0	0.083	11.8	0.0	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_5	PF07728.9	gi|289596473|ref|YP_003483169.1|	-	0.049	13.3	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
DNA_pol3_delta2	PF13177.1	gi|289596473|ref|YP_003483169.1|	-	0.058	13.0	0.0	2.4	7.8	0.0	2.3	1	1	1	2	2	2	0	DNA	polymerase	III,	delta	subunit
RNA_helicase	PF00910.17	gi|289596473|ref|YP_003483169.1|	-	0.072	13.2	0.1	0.23	11.6	0.0	2.0	2	1	0	2	2	1	0	RNA	helicase
AAA_16	PF13191.1	gi|289596473|ref|YP_003483169.1|	-	0.081	12.8	0.0	0.1	12.5	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF2075	PF09848.4	gi|289596473|ref|YP_003483169.1|	-	0.17	10.8	0.0	0.24	10.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|289596474|ref|YP_003483170.1|	-	4.8e-40	137.0	0.1	7.4e-40	136.4	0.0	1.3	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596474|ref|YP_003483170.1|	-	1.3e-05	24.6	0.0	2.6e-05	23.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|289596474|ref|YP_003483170.1|	-	0.0031	15.8	0.3	0.016	13.5	0.2	1.9	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
IstB_IS21	PF01695.12	gi|289596474|ref|YP_003483170.1|	-	0.0081	15.6	0.0	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_22	PF13401.1	gi|289596474|ref|YP_003483170.1|	-	0.016	15.3	0.1	0.053	13.6	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|289596474|ref|YP_003483170.1|	-	0.052	13.0	0.0	0.081	12.4	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PAXNEB	PF05625.6	gi|289596474|ref|YP_003483170.1|	-	0.053	12.3	0.4	0.23	10.2	0.1	1.8	2	0	0	2	2	2	0	PAXNEB	protein
DUF2075	PF09848.4	gi|289596474|ref|YP_003483170.1|	-	0.057	12.3	0.0	0.085	11.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|289596474|ref|YP_003483170.1|	-	0.093	12.5	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.1	gi|289596474|ref|YP_003483170.1|	-	0.11	12.5	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|289596474|ref|YP_003483170.1|	-	0.11	11.3	0.1	0.18	10.6	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.1	gi|289596474|ref|YP_003483170.1|	-	0.13	11.8	0.2	1.1	8.8	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
Lar_restr_allev	PF14354.1	gi|289596475|ref|YP_003483171.1|	-	0.0054	16.9	0.2	0.0092	16.2	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
TIP49	PF06068.8	gi|289596475|ref|YP_003483171.1|	-	0.0091	14.7	1.9	0.011	14.5	1.3	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
MS_channel	PF00924.13	gi|289596475|ref|YP_003483171.1|	-	0.014	14.6	0.2	0.068	12.4	0.0	1.9	1	1	1	2	2	2	0	Mechanosensitive	ion	channel
zf-IS66	PF13005.2	gi|289596475|ref|YP_003483171.1|	-	0.03	14.2	1.0	0.091	12.7	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
RBD	PF02196.10	gi|289596475|ref|YP_003483171.1|	-	0.038	13.7	0.1	0.27	10.9	0.1	2.0	2	0	0	2	2	2	0	Raf-like	Ras-binding	domain
Zn-ribbon_8	PF09723.5	gi|289596475|ref|YP_003483171.1|	-	0.055	13.4	0.3	1.3	9.0	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|289596475|ref|YP_003483171.1|	-	0.055	13.1	0.1	0.14	11.9	0.1	1.7	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
CCDC92	PF14916.1	gi|289596475|ref|YP_003483171.1|	-	0.11	12.1	0.5	0.18	11.4	0.4	1.3	1	0	0	1	1	1	0	Coiled-coil	domain	of	unknown	function
zf-TFIIB	PF13453.1	gi|289596475|ref|YP_003483171.1|	-	0.13	11.4	0.6	0.33	10.1	0.4	1.7	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
Rad50_zn_hook	PF04423.9	gi|289596475|ref|YP_003483171.1|	-	0.16	11.4	0.0	0.16	11.4	0.0	2.2	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
DUF1272	PF06906.6	gi|289596475|ref|YP_003483171.1|	-	0.21	11.4	1.5	3.3	7.6	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zf-C4_Topoisom	PF01396.14	gi|289596475|ref|YP_003483171.1|	-	0.33	10.4	0.2	0.33	10.4	0.1	1.9	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-H2C2_2	PF13465.1	gi|289596475|ref|YP_003483171.1|	-	0.76	10.1	2.7	6.9	7.1	0.0	2.5	3	0	0	3	3	2	0	Zinc-finger	double	domain
CENP-H	PF05837.7	gi|289596476|ref|YP_003483172.1|	-	0.12	12.5	0.3	0.14	12.3	0.2	1.0	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
Ribosomal_S6e	PF01092.14	gi|289596477|ref|YP_003483173.1|	-	1.2e-34	118.7	1.5	1.3e-34	118.5	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.22	gi|289596478|ref|YP_003483174.1|	-	8.8e-45	152.4	0.2	1.3e-44	151.9	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|289596478|ref|YP_003483174.1|	-	3.3e-32	110.3	0.7	6.8e-32	109.3	0.5	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|289596478|ref|YP_003483174.1|	-	5e-05	23.3	0.2	0.00017	21.6	0.1	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|289596478|ref|YP_003483174.1|	-	0.00084	19.2	0.0	0.0016	18.4	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|289596478|ref|YP_003483174.1|	-	0.0011	18.4	1.4	0.27	10.6	0.0	2.5	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
FeoB_N	PF02421.13	gi|289596478|ref|YP_003483174.1|	-	0.048	12.9	0.7	11	5.2	0.0	2.8	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B
ArgK	PF03308.11	gi|289596478|ref|YP_003483174.1|	-	0.11	11.2	1.6	0.16	10.7	0.1	1.9	2	0	0	2	2	2	0	ArgK	protein
NTP_transf_3	PF12804.2	gi|289596480|ref|YP_003483176.1|	-	3.8e-10	40.0	0.0	4.9e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
2Fe-2S_thioredx	PF01257.14	gi|289596481|ref|YP_003483177.1|	-	8.9e-51	171.2	0.0	9.8e-51	171.1	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin-like	[2Fe-2S]	ferredoxin
Complex1_51K	PF01512.12	gi|289596482|ref|YP_003483178.1|	-	6.8e-51	171.9	0.0	1e-50	171.3	0.0	1.3	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.4	gi|289596482|ref|YP_003483178.1|	-	2.1e-19	68.4	0.2	4.3e-19	67.4	0.1	1.6	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.4	gi|289596482|ref|YP_003483178.1|	-	0.00012	21.9	1.3	0.00027	20.7	0.9	1.6	1	0	0	1	1	1	1	SLBB	domain
Molybdopterin	PF00384.17	gi|289596483|ref|YP_003483179.1|	-	4.3e-104	348.6	0.0	5.7e-104	348.2	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|289596483|ref|YP_003483179.1|	-	7.7e-32	109.3	0.0	1.6e-31	108.3	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Fer2_4	PF13510.1	gi|289596483|ref|YP_003483179.1|	-	1.3e-15	56.9	0.2	3.5e-15	55.5	0.1	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|289596483|ref|YP_003483179.1|	-	1.8e-13	50.0	1.0	6.3e-13	48.3	0.7	2.0	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_8	PF13183.1	gi|289596483|ref|YP_003483179.1|	-	1.1e-06	28.5	6.8	1.1e-06	28.5	4.7	2.1	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289596483|ref|YP_003483179.1|	-	7.7e-06	26.1	9.8	7.7e-06	26.1	6.8	3.2	4	1	1	5	5	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596483|ref|YP_003483179.1|	-	0.00016	21.4	10.2	0.00016	21.4	7.1	3.1	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596483|ref|YP_003483179.1|	-	0.00031	20.9	7.1	0.0046	17.1	1.4	3.5	4	1	1	5	5	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596483|ref|YP_003483179.1|	-	0.00046	19.9	17.4	0.037	13.9	1.1	3.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|289596483|ref|YP_003483179.1|	-	0.00051	19.5	6.2	0.00051	19.5	4.3	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|289596483|ref|YP_003483179.1|	-	0.0015	18.2	1.6	0.0015	18.2	1.1	4.0	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|289596483|ref|YP_003483179.1|	-	0.0026	18.1	12.9	0.031	14.7	0.5	3.5	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|289596483|ref|YP_003483179.1|	-	0.0068	16.8	7.8	0.0068	16.8	5.4	4.1	4	0	0	4	4	3	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596483|ref|YP_003483179.1|	-	0.0075	16.1	8.3	0.0075	16.1	5.7	2.7	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
TerB-N	PF13208.1	gi|289596483|ref|YP_003483179.1|	-	0.25	10.7	0.0	0.57	9.5	0.0	1.5	1	0	0	1	1	1	0	TerB-N
Fer4_16	PF13484.1	gi|289596483|ref|YP_003483179.1|	-	0.93	10.2	19.0	0.03	15.0	2.9	3.3	3	0	0	3	3	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.1	gi|289596483|ref|YP_003483179.1|	-	1.5	9.4	12.4	2.9	8.5	1.0	3.0	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|289596483|ref|YP_003483179.1|	-	1.6	9.1	14.0	4.5	7.7	2.3	3.0	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Amidohydro_1	PF01979.15	gi|289596484|ref|YP_003483180.1|	-	3.4e-55	188.0	1.7	4e-55	187.7	1.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|289596484|ref|YP_003483180.1|	-	2.5e-15	57.2	0.0	7.9e-10	39.2	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|289596484|ref|YP_003483180.1|	-	4.7e-13	48.7	0.0	1.1e-12	47.5	0.0	1.7	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|289596484|ref|YP_003483180.1|	-	5.1e-13	49.0	0.5	5.5e-10	39.0	0.0	2.4	2	1	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.17	gi|289596484|ref|YP_003483180.1|	-	0.021	13.7	0.1	0.056	12.3	0.0	1.7	2	0	0	2	2	2	0	Adenosine/AMP	deaminase
Lactamase_B_2	PF12706.2	gi|289596485|ref|YP_003483181.1|	-	6e-24	84.6	0.2	7.4e-24	84.3	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|289596485|ref|YP_003483181.1|	-	2e-15	56.8	0.5	3.2e-15	56.2	0.3	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289596485|ref|YP_003483181.1|	-	1.6e-05	24.6	2.5	3.8e-05	23.4	1.8	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Metallophos_3	PF14582.1	gi|289596485|ref|YP_003483181.1|	-	0.059	12.5	0.0	0.13	11.4	0.0	1.5	1	0	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
DUF3783	PF12646.2	gi|289596486|ref|YP_003483182.1|	-	1.1e-15	57.0	3.5	2.3e-15	56.0	0.2	2.5	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF3783)
Atg8	PF02991.11	gi|289596486|ref|YP_003483182.1|	-	0.032	14.1	0.8	0.6	10.1	0.5	2.0	1	1	0	1	1	1	0	Autophagy	protein	Atg8	ubiquitin	like
AFOR_C	PF01314.13	gi|289596487|ref|YP_003483183.1|	-	4.8e-98	328.3	0.0	1.5e-97	326.6	0.0	1.7	1	1	1	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|289596487|ref|YP_003483183.1|	-	3.6e-79	264.7	0.2	6.7e-79	263.9	0.1	1.4	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
PEMT	PF04191.8	gi|289596488|ref|YP_003483184.1|	-	2.2e-14	53.4	1.0	3.5e-14	52.7	0.7	1.3	1	0	0	1	1	1	1	Phospholipid	methyltransferase
DUF1295	PF06966.7	gi|289596488|ref|YP_003483184.1|	-	2.2e-05	23.9	0.3	2.8e-05	23.5	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1295)
ICMT	PF04140.9	gi|289596488|ref|YP_003483184.1|	-	3.7e-05	23.8	0.7	9e-05	22.6	0.1	1.8	1	1	1	2	2	2	1	Isoprenylcysteine	carboxyl	methyltransferase	(ICMT)	family
DUF3098	PF11297.3	gi|289596488|ref|YP_003483184.1|	-	0.0031	17.1	0.8	1.2	8.9	0.1	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3098)
DNA_ligase_A_M	PF01068.16	gi|289596489|ref|YP_003483185.1|	-	1e-55	188.2	0.0	1.7e-55	187.5	0.0	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|289596489|ref|YP_003483185.1|	-	4.5e-52	176.4	2.0	8.5e-52	175.5	1.4	1.5	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|289596489|ref|YP_003483185.1|	-	4.6e-23	81.4	0.1	3.3e-22	78.7	0.0	2.2	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.1	gi|289596489|ref|YP_003483185.1|	-	0.00015	21.4	0.1	0.0011	18.6	0.0	2.5	3	0	0	3	3	3	1	DNA	ligase	OB-like	domain
mRNA_cap_enzyme	PF01331.14	gi|289596489|ref|YP_003483185.1|	-	0.0017	18.0	0.0	0.33	10.6	0.0	2.5	2	0	0	2	2	2	2	mRNA	capping	enzyme,	catalytic	domain
ABC2_membrane_4	PF12730.2	gi|289596490|ref|YP_003483186.1|	-	8.9e-17	61.0	40.2	1.4e-16	60.3	27.8	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|289596490|ref|YP_003483186.1|	-	3.5e-16	58.8	24.2	5.6e-16	58.2	16.8	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|289596490|ref|YP_003483186.1|	-	3.6e-08	32.8	39.4	1.1e-07	31.1	27.3	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|289596490|ref|YP_003483186.1|	-	1e-06	28.0	26.9	1e-06	28.0	18.6	1.9	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_5	PF13346.1	gi|289596490|ref|YP_003483186.1|	-	0.0034	16.7	46.6	0.11	11.8	23.4	3.0	1	1	1	2	2	2	2	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|289596491|ref|YP_003483187.1|	-	2.6e-28	99.0	0.0	5.6e-28	97.9	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|289596491|ref|YP_003483187.1|	-	8.1e-13	48.9	0.7	4.1e-07	30.2	0.0	2.9	2	1	0	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|289596491|ref|YP_003483187.1|	-	0.0004	19.5	5.8	0.015	14.3	0.0	3.1	2	1	0	3	3	3	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596491|ref|YP_003483187.1|	-	0.011	15.2	0.1	0.035	13.6	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|289596491|ref|YP_003483187.1|	-	0.013	15.0	0.0	0.025	14.1	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|289596491|ref|YP_003483187.1|	-	0.031	14.2	0.0	0.054	13.4	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF4162	PF13732.1	gi|289596491|ref|YP_003483187.1|	-	0.034	14.6	0.5	0.082	13.4	0.2	1.8	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4162)
Mg_chelatase	PF01078.16	gi|289596491|ref|YP_003483187.1|	-	0.046	12.8	0.0	0.092	11.8	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SMC_N	PF02463.14	gi|289596491|ref|YP_003483187.1|	-	0.064	12.4	0.4	1.4	8.0	0.0	2.2	1	1	1	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Atg31	PF09795.4	gi|289596491|ref|YP_003483187.1|	-	0.069	12.8	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	Autophagy-related	protein	31
AAA_22	PF13401.1	gi|289596491|ref|YP_003483187.1|	-	0.094	12.8	0.2	0.35	11.0	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|289596491|ref|YP_003483187.1|	-	1.2	9.3	6.9	8.6	6.6	4.8	2.3	1	1	0	1	1	1	0	AAA	domain
DUF4399	PF14347.1	gi|289596492|ref|YP_003483188.1|	-	0.061	13.3	0.1	0.29	11.1	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4399)
DUF1648	PF07853.6	gi|289596493|ref|YP_003483189.1|	-	7.6e-13	47.7	0.7	7.6e-13	47.7	0.5	5.2	6	1	1	7	7	7	1	Protein	of	unknown	function	(DUF1648)
SdpI	PF13630.1	gi|289596493|ref|YP_003483189.1|	-	6.9e-10	38.5	8.5	6.9e-10	38.5	5.9	5.0	4	1	0	4	4	4	2	SdpI/YhfL	protein	family
PadR	PF03551.9	gi|289596494|ref|YP_003483190.1|	-	2.1e-19	69.0	0.4	2.1e-19	69.0	0.3	1.6	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
Replic_Relax	PF13814.1	gi|289596494|ref|YP_003483190.1|	-	0.013	15.3	0.1	0.017	15.0	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
DUF505	PF04458.7	gi|289596494|ref|YP_003483190.1|	-	0.015	13.4	0.2	0.018	13.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
DUF2250	PF10007.4	gi|289596494|ref|YP_003483190.1|	-	0.055	13.3	0.4	0.44	10.4	0.0	2.3	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DNA_gyraseB	PF00204.20	gi|289596495|ref|YP_003483191.1|	-	1.8e-61	206.3	0.2	3.1e-61	205.5	0.1	1.4	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.16	gi|289596495|ref|YP_003483191.1|	-	1.3e-30	104.8	0.1	2.6e-30	103.9	0.1	1.5	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
Toprim	PF01751.17	gi|289596495|ref|YP_003483191.1|	-	2.4e-29	101.2	0.0	5.6e-29	100.0	0.0	1.7	1	0	0	1	1	1	1	Toprim	domain
HATPase_c	PF02518.21	gi|289596495|ref|YP_003483191.1|	-	3.2e-17	62.2	0.0	2.3e-16	59.4	0.0	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|289596495|ref|YP_003483191.1|	-	5.5e-05	22.8	0.0	0.00012	21.7	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Toprim_4	PF13662.1	gi|289596495|ref|YP_003483191.1|	-	0.078	12.9	0.0	0.23	11.5	0.0	1.8	1	0	0	1	1	1	0	Toprim	domain
DNA_topoisoIV	PF00521.15	gi|289596496|ref|YP_003483192.1|	-	9.4e-160	532.0	1.7	1.2e-159	531.7	1.2	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.8	gi|289596496|ref|YP_003483192.1|	-	2.9e-64	212.1	19.5	5.9e-17	60.6	0.2	6.5	6	0	0	6	6	6	6	DNA	gyrase	C-terminal	domain,	beta-propeller
TPD52	PF04201.10	gi|289596496|ref|YP_003483192.1|	-	0.0046	16.6	1.9	0.0095	15.6	1.3	1.4	1	0	0	1	1	1	1	Tumour	protein	D52	family
Radical_SAM	PF04055.16	gi|289596497|ref|YP_003483193.1|	-	4.3e-15	56.2	0.0	2.7e-14	53.6	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
DUF1798	PF08807.5	gi|289596497|ref|YP_003483193.1|	-	0.011	15.4	0.4	0.04	13.6	0.3	2.0	1	1	0	1	1	1	0	Bacterial	domain	of	unknown	function	(DUF1798)
YicC_N	PF03755.8	gi|289596497|ref|YP_003483193.1|	-	0.1	12.5	0.2	0.3	10.9	0.0	1.8	2	0	0	2	2	2	0	YicC-like	family,	N-terminal	region
Exo_endo_phos	PF03372.18	gi|289596498|ref|YP_003483194.1|	-	5.3e-25	88.7	0.0	6.3e-25	88.5	0.0	1.0	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|289596498|ref|YP_003483194.1|	-	1.4e-15	56.9	0.0	1.9e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
DUF4065	PF13274.1	gi|289596499|ref|YP_003483195.1|	-	1e-05	26.1	0.2	1.3e-05	25.8	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
Imm2	PF14426.1	gi|289596499|ref|YP_003483195.1|	-	2.7	8.0	4.7	30	4.7	0.2	2.8	2	1	0	2	2	2	0	Immunity	protein	Imm2
CbiA	PF01656.18	gi|289596500|ref|YP_003483196.1|	-	5.3e-27	94.4	0.0	7.1e-27	94.0	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4	PF00037.22	gi|289596500|ref|YP_003483196.1|	-	6.5e-08	31.8	16.8	0.0004	19.8	2.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596500|ref|YP_003483196.1|	-	8.4e-08	31.9	14.4	1.2e-07	31.4	9.4	1.7	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289596500|ref|YP_003483196.1|	-	4.3e-07	30.2	11.5	1e-06	29.0	8.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596500|ref|YP_003483196.1|	-	6.1e-07	29.1	11.5	1.1e-06	28.2	8.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596500|ref|YP_003483196.1|	-	7.6e-07	29.3	13.1	1.4e-06	28.4	9.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.13	gi|289596500|ref|YP_003483196.1|	-	1.1e-06	28.0	0.0	0.0022	17.2	0.0	2.4	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_8	PF13183.1	gi|289596500|ref|YP_003483196.1|	-	1.4e-06	28.2	8.4	2.6e-06	27.3	5.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596500|ref|YP_003483196.1|	-	0.00022	20.9	15.0	0.0029	17.4	2.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289596500|ref|YP_003483196.1|	-	0.0015	18.3	16.2	0.018	14.9	2.1	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|289596500|ref|YP_003483196.1|	-	0.0036	17.5	14.0	0.036	14.3	2.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596500|ref|YP_003483196.1|	-	0.012	15.9	12.3	0.61	10.4	2.2	2.4	1	1	3	4	4	4	0	4Fe-4S	dicluster	domain
ArsA_ATPase	PF02374.10	gi|289596500|ref|YP_003483196.1|	-	0.016	14.2	0.0	0.027	13.5	0.0	1.4	1	0	0	1	1	1	0	Anion-transporting	ATPase
AAA_26	PF13500.1	gi|289596500|ref|YP_003483196.1|	-	0.017	14.7	0.2	0.35	10.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
MipZ	PF09140.6	gi|289596500|ref|YP_003483196.1|	-	0.019	14.0	0.0	0.027	13.5	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
YhjQ	PF06564.7	gi|289596500|ref|YP_003483196.1|	-	0.021	14.1	0.0	0.28	10.5	0.0	2.3	3	0	0	3	3	3	0	YhjQ	protein
Fer4_16	PF13484.1	gi|289596500|ref|YP_003483196.1|	-	0.052	14.3	13.6	0.38	11.5	1.8	2.7	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|289596500|ref|YP_003483196.1|	-	0.12	12.8	15.6	0.31	11.5	2.5	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|289596500|ref|YP_003483196.1|	-	0.13	12.6	10.7	0.71	10.2	1.0	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
AAA_31	PF13614.1	gi|289596500|ref|YP_003483196.1|	-	0.15	11.9	0.0	0.3	10.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Fer4_3	PF12798.2	gi|289596500|ref|YP_003483196.1|	-	1	10.0	18.4	0.13	12.8	4.7	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|289596500|ref|YP_003483196.1|	-	2.5	8.7	13.9	0.65	10.6	2.1	2.6	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
CbiA	PF01656.18	gi|289596501|ref|YP_003483197.1|	-	2.2e-31	108.7	0.0	2.9e-31	108.3	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_6	PF12837.2	gi|289596501|ref|YP_003483197.1|	-	3.8e-11	42.3	8.2	1.9e-06	27.4	0.7	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596501|ref|YP_003483197.1|	-	7.5e-09	35.8	21.6	1.6e-06	28.3	7.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596501|ref|YP_003483197.1|	-	8.6e-08	31.6	10.5	0.00029	20.5	1.2	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596501|ref|YP_003483197.1|	-	9.9e-08	31.6	27.9	2.8e-06	27.0	6.3	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596501|ref|YP_003483197.1|	-	1.6e-07	30.5	14.7	2.7e-05	23.5	1.1	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596501|ref|YP_003483197.1|	-	3.4e-07	30.0	4.4	7e-07	29.0	3.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.13	gi|289596501|ref|YP_003483197.1|	-	1e-06	28.1	0.4	0.012	14.8	0.0	2.3	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_31	PF13614.1	gi|289596501|ref|YP_003483197.1|	-	7.2e-06	26.0	0.0	3e-05	24.0	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
Fer4_9	PF13187.1	gi|289596501|ref|YP_003483197.1|	-	4.6e-05	23.6	11.1	0.0002	21.5	7.8	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
MipZ	PF09140.6	gi|289596501|ref|YP_003483197.1|	-	0.00024	20.2	0.1	0.0011	18.1	0.0	1.9	2	0	0	2	2	2	1	ATPase	MipZ
Fer4_8	PF13183.1	gi|289596501|ref|YP_003483197.1|	-	0.00048	20.1	11.8	0.029	14.3	9.6	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
ArsA_ATPase	PF02374.10	gi|289596501|ref|YP_003483197.1|	-	0.00085	18.4	3.4	0.00094	18.3	1.1	1.9	2	1	1	3	3	3	1	Anion-transporting	ATPase
Fer4_4	PF12800.2	gi|289596501|ref|YP_003483197.1|	-	0.0027	17.8	12.5	0.032	14.5	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
AAA_25	PF13481.1	gi|289596501|ref|YP_003483197.1|	-	0.0051	16.2	0.1	0.013	14.9	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
Fer4_15	PF13459.1	gi|289596501|ref|YP_003483197.1|	-	0.0059	17.1	5.1	1	9.9	0.4	3.0	3	0	0	3	3	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|289596501|ref|YP_003483197.1|	-	0.007	17.0	12.9	0.049	14.3	1.4	2.6	2	1	2	4	4	3	2	4Fe-4S	double	cluster	binding	domain
NAD_binding_10	PF13460.1	gi|289596501|ref|YP_003483197.1|	-	0.018	15.0	0.0	3.9	7.4	0.0	2.2	2	0	0	2	2	2	0	NADH(P)-binding
Fer4_18	PF13746.1	gi|289596501|ref|YP_003483197.1|	-	0.022	15.1	7.8	0.56	10.6	0.4	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289596501|ref|YP_003483197.1|	-	0.025	14.9	14.6	0.33	11.3	2.4	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
ParA	PF10609.4	gi|289596501|ref|YP_003483197.1|	-	0.035	14.0	0.1	0.079	12.8	0.0	1.6	1	0	0	1	1	1	0	ParA/MinD	ATPase	like
VirC1	PF07015.6	gi|289596501|ref|YP_003483197.1|	-	0.038	13.0	0.6	1.5	7.8	0.0	2.2	2	0	0	2	2	2	0	VirC1	protein
AAA_33	PF13671.1	gi|289596501|ref|YP_003483197.1|	-	0.041	13.7	0.0	0.075	12.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|289596501|ref|YP_003483197.1|	-	0.045	13.9	0.1	0.11	12.6	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_18	PF13238.1	gi|289596501|ref|YP_003483197.1|	-	0.063	13.5	0.5	0.17	12.1	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|289596501|ref|YP_003483197.1|	-	0.066	14.0	0.9	0.13	13.0	0.3	2.1	1	1	1	2	2	2	0	AAA	domain
Fer4_3	PF12798.2	gi|289596501|ref|YP_003483197.1|	-	0.082	13.5	20.0	0.56	10.9	3.2	2.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
YhjQ	PF06564.7	gi|289596501|ref|YP_003483197.1|	-	0.14	11.4	0.0	5.9	6.1	0.0	2.1	2	0	0	2	2	2	0	YhjQ	protein
Fer4_13	PF13370.1	gi|289596501|ref|YP_003483197.1|	-	4.5	7.7	12.8	8.5	6.8	1.0	2.7	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Nitro_FeMo-Co	PF02579.12	gi|289596502|ref|YP_003483198.1|	-	1.5e-19	69.8	0.0	1.9e-19	69.5	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Synaptobrevin	PF00957.16	gi|289596503|ref|YP_003483199.1|	-	0.35	10.5	2.1	1.5	8.4	0.0	2.4	2	0	0	2	2	2	0	Synaptobrevin
DUF1312	PF07009.6	gi|289596503|ref|YP_003483199.1|	-	1.9	8.3	6.6	9.1	6.1	0.3	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1312)
ABC_tran	PF00005.22	gi|289596505|ref|YP_003483201.1|	-	2.3e-28	99.1	0.0	3.2e-28	98.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596505|ref|YP_003483201.1|	-	6e-16	59.2	1.5	2.1e-10	41.0	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|289596505|ref|YP_003483201.1|	-	4.7e-10	39.0	2.1	5.8e-07	28.8	1.1	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|289596505|ref|YP_003483201.1|	-	0.00039	20.7	2.6	0.001	19.4	1.8	1.8	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|289596505|ref|YP_003483201.1|	-	0.0014	17.4	0.0	0.0023	16.7	0.0	1.2	1	0	0	1	1	1	1	ArgK	protein
DUF258	PF03193.11	gi|289596505|ref|YP_003483201.1|	-	0.0017	17.5	0.0	0.0021	17.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|289596505|ref|YP_003483201.1|	-	0.0018	17.0	0.0	0.0029	16.3	0.0	1.3	1	1	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_29	PF13555.1	gi|289596505|ref|YP_003483201.1|	-	0.0023	17.4	0.1	0.004	16.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
UPF0079	PF02367.12	gi|289596505|ref|YP_003483201.1|	-	0.0035	16.9	0.2	0.0071	15.9	0.1	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|289596505|ref|YP_003483201.1|	-	0.0068	15.6	0.2	1.9	7.6	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
KAP_NTPase	PF07693.9	gi|289596505|ref|YP_003483201.1|	-	0.028	13.4	1.7	0.8	8.6	1.2	2.1	1	1	0	1	1	1	0	KAP	family	P-loop	domain
AAA_10	PF12846.2	gi|289596505|ref|YP_003483201.1|	-	0.038	13.4	0.0	0.071	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_22	PF13401.1	gi|289596505|ref|YP_003483201.1|	-	0.04	14.0	0.4	0.43	10.7	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|289596505|ref|YP_003483201.1|	-	0.041	13.3	0.3	0.073	12.5	0.2	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|289596505|ref|YP_003483201.1|	-	0.057	13.3	0.7	0.098	12.6	0.5	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|289596505|ref|YP_003483201.1|	-	0.087	12.3	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|289596505|ref|YP_003483201.1|	-	0.13	11.3	0.0	0.18	10.8	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA	PF00004.24	gi|289596505|ref|YP_003483201.1|	-	0.13	12.4	3.5	0.15	12.2	0.6	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|289596505|ref|YP_003483201.1|	-	0.16	11.7	0.1	0.31	10.9	0.0	1.5	2	0	0	2	2	1	0	AAA	domain
AAA_16	PF13191.1	gi|289596505|ref|YP_003483201.1|	-	0.18	11.7	0.3	0.58	10.1	0.2	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_14	PF13173.1	gi|289596505|ref|YP_003483201.1|	-	0.2	11.5	1.3	1.8	8.4	0.4	2.5	1	1	1	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|289596505|ref|YP_003483201.1|	-	0.27	10.9	0.0	0.27	10.9	0.0	2.4	2	1	0	2	2	2	0	Archaeal	ATPase
DHODB_Fe-S_bind	PF10418.4	gi|289596506|ref|YP_003483202.1|	-	1.8e-12	46.5	0.9	3.1e-12	45.7	0.6	1.4	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.16	gi|289596506|ref|YP_003483202.1|	-	3.4e-10	40.4	0.0	5.9e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.19	gi|289596506|ref|YP_003483202.1|	-	8.7e-07	28.9	0.0	1.7e-06	28.0	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
DHO_dh	PF01180.16	gi|289596507|ref|YP_003483203.1|	-	3.7e-72	242.7	1.8	4.1e-72	242.6	1.3	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|289596507|ref|YP_003483203.1|	-	2.6e-11	42.9	0.3	5.5e-09	35.2	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.10	gi|289596507|ref|YP_003483203.1|	-	1.8e-05	24.0	2.9	0.0002	20.6	2.0	2.2	1	1	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|289596507|ref|YP_003483203.1|	-	0.00013	21.2	1.1	0.0059	15.9	0.1	2.7	2	2	0	3	3	3	1	Histidine	biosynthesis	protein
IMPDH	PF00478.20	gi|289596507|ref|YP_003483203.1|	-	0.0016	17.4	0.1	0.0034	16.3	0.1	1.4	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.13	gi|289596507|ref|YP_003483203.1|	-	0.0034	16.2	0.4	0.013	14.3	0.0	1.9	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
PcrB	PF01884.12	gi|289596507|ref|YP_003483203.1|	-	0.013	14.7	0.9	0.013	14.7	0.6	3.0	3	0	0	3	3	3	0	PcrB	family
Radical_SAM	PF04055.16	gi|289596507|ref|YP_003483203.1|	-	0.015	15.4	0.1	3	7.9	0.0	3.0	2	1	1	3	3	3	0	Radical	SAM	superfamily
DUF1887	PF09002.6	gi|289596507|ref|YP_003483203.1|	-	0.054	11.8	0.1	0.075	11.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1887)
DUF561	PF04481.7	gi|289596507|ref|YP_003483203.1|	-	0.059	12.3	3.5	0.53	9.1	1.5	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
DHquinase_I	PF01487.10	gi|289596507|ref|YP_003483203.1|	-	0.12	11.9	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	Type	I	3-dehydroquinase
DUF3783	PF12646.2	gi|289596507|ref|YP_003483203.1|	-	0.21	11.3	0.9	0.5	10.1	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3783)
CinA	PF02464.12	gi|289596508|ref|YP_003483204.1|	-	1.3e-60	203.3	0.2	1.5e-60	203.1	0.2	1.0	1	0	0	1	1	1	1	Competence-damaged	protein
UPF0254	PF06787.6	gi|289596508|ref|YP_003483204.1|	-	0.071	12.6	1.4	1.2	8.6	0.2	2.1	1	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0254)
CTP_transf_2	PF01467.21	gi|289596509|ref|YP_003483205.1|	-	1.3e-15	57.7	0.0	1.7e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
VIT1	PF01988.14	gi|289596510|ref|YP_003483206.1|	-	2.4e-47	161.1	5.7	2.4e-47	161.1	4.0	1.4	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.12	gi|289596510|ref|YP_003483206.1|	-	4e-05	23.9	5.8	9.2e-05	22.7	4.0	1.6	1	0	0	1	1	1	1	Rubrerythrin
DUF2628	PF10947.3	gi|289596510|ref|YP_003483206.1|	-	0.021	14.6	0.6	0.052	13.3	0.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
PEX11	PF05648.9	gi|289596510|ref|YP_003483206.1|	-	0.088	12.0	0.0	0.17	11.1	0.0	1.5	1	0	0	1	1	1	0	Peroxisomal	biogenesis	factor	11	(PEX11)
Rhomboid	PF01694.17	gi|289596510|ref|YP_003483206.1|	-	9.8	6.1	13.6	1.1	9.2	0.4	2.5	2	0	0	2	2	2	0	Rhomboid	family
Pribosyltran	PF00156.22	gi|289596511|ref|YP_003483207.1|	-	6e-23	80.9	0.0	1.1e-22	80.1	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|289596511|ref|YP_003483207.1|	-	0.017	14.3	0.0	0.022	13.9	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
PqqD	PF05402.7	gi|289596511|ref|YP_003483207.1|	-	0.042	13.8	0.0	0.074	13.0	0.0	1.4	1	0	0	1	1	1	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
THF_DHG_CYH_C	PF02882.14	gi|289596511|ref|YP_003483207.1|	-	0.087	11.9	0.0	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
HTH_Crp_2	PF13545.1	gi|289596511|ref|YP_003483207.1|	-	0.14	11.9	0.2	0.29	10.9	0.1	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Pribosyltran	PF00156.22	gi|289596512|ref|YP_003483208.1|	-	1.8e-19	69.7	1.6	2.5e-19	69.2	1.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|289596512|ref|YP_003483208.1|	-	9.3e-06	24.9	0.2	1.4e-05	24.3	0.1	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|289596512|ref|YP_003483208.1|	-	0.00012	21.4	0.2	0.00018	20.9	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase
CAP18_C	PF12153.3	gi|289596512|ref|YP_003483208.1|	-	0.52	9.9	5.0	0.78	9.4	0.1	2.5	2	0	0	2	2	2	0	LPS	binding	domain	of	CAP18	(C	terminal)
Glycos_trans_3N	PF02885.12	gi|289596513|ref|YP_003483209.1|	-	0.00074	19.0	3.5	0.0016	18.0	0.2	2.3	2	1	1	3	3	3	1	Glycosyl	transferase	family,	helical	bundle	domain
DUF3387	PF11867.3	gi|289596513|ref|YP_003483209.1|	-	0.0019	17.2	5.8	0.0021	17.0	4.0	1.2	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3387)
DUF3683	PF12447.3	gi|289596513|ref|YP_003483209.1|	-	0.0099	15.7	0.5	0.044	13.6	0.3	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3683)
COMPASS-Shg1	PF05205.7	gi|289596513|ref|YP_003483209.1|	-	0.012	15.8	1.6	0.015	15.5	1.1	1.2	1	0	0	1	1	1	0	COMPASS	(Complex	proteins	associated	with	Set1p)	component	shg1
RGS	PF00615.14	gi|289596513|ref|YP_003483209.1|	-	0.054	13.5	0.7	0.066	13.3	0.5	1.2	1	0	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
DUF2939	PF11159.3	gi|289596513|ref|YP_003483209.1|	-	0.11	12.6	0.5	0.19	11.8	0.2	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2939)
DUF3802	PF12290.3	gi|289596513|ref|YP_003483209.1|	-	0.16	12.3	2.3	0.24	11.7	1.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3802)
Cas_Cas6	PF01881.11	gi|289596513|ref|YP_003483209.1|	-	0.22	11.7	3.8	0.18	12.0	1.6	1.6	1	1	1	2	2	2	0	CRISPR	associated	protein	Cas6
OmpH	PF03938.9	gi|289596513|ref|YP_003483209.1|	-	0.51	10.2	4.3	0.83	9.5	3.0	1.5	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Tim44	PF04280.10	gi|289596513|ref|YP_003483209.1|	-	0.63	10.0	3.2	0.34	10.8	0.6	1.7	2	0	0	2	2	2	0	Tim44-like	domain
COMP	PF11598.3	gi|289596513|ref|YP_003483209.1|	-	2.9	8.0	8.7	2.9	8.0	0.9	3.2	3	1	1	4	4	4	0	Cartilage	oligomeric	matrix	protein
UPF0154	PF03672.8	gi|289596513|ref|YP_003483209.1|	-	3.1	7.4	8.6	0.85	9.2	3.0	2.2	2	1	1	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
BPD_transp_1	PF00528.17	gi|289596517|ref|YP_003483213.1|	-	1.6e-36	125.5	11.8	1.6e-36	125.5	8.2	1.7	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|289596518|ref|YP_003483214.1|	-	6.1e-27	94.3	14.5	6.1e-27	94.3	10.0	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|289596518|ref|YP_003483214.1|	-	4.7e-09	35.4	0.2	4.7e-09	35.4	0.1	3.0	3	0	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
ABC_tran	PF00005.22	gi|289596519|ref|YP_003483215.1|	-	1.6e-23	83.4	0.0	3.1e-23	82.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596519|ref|YP_003483215.1|	-	1.1e-21	76.9	0.5	2.6e-21	75.7	0.3	1.7	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289596519|ref|YP_003483215.1|	-	1.4e-09	38.3	0.0	3.3e-08	33.8	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
CdhD	PF03599.11	gi|289596519|ref|YP_003483215.1|	-	0.00034	19.2	0.3	0.00048	18.7	0.2	1.1	1	0	0	1	1	1	1	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
SMC_N	PF02463.14	gi|289596519|ref|YP_003483215.1|	-	0.00087	18.5	1.0	0.0097	15.1	0.7	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|289596519|ref|YP_003483215.1|	-	0.0039	16.6	0.0	0.071	12.5	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|289596519|ref|YP_003483215.1|	-	0.012	14.4	0.3	0.23	10.2	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
AAA	PF00004.24	gi|289596519|ref|YP_003483215.1|	-	0.013	15.7	1.1	0.18	12.0	0.8	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|289596519|ref|YP_003483215.1|	-	0.022	14.2	0.1	0.041	13.4	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.20	gi|289596519|ref|YP_003483215.1|	-	0.039	13.4	0.2	0.11	11.9	0.2	1.8	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.7	gi|289596519|ref|YP_003483215.1|	-	0.049	13.2	0.0	0.083	12.5	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
PRK	PF00485.13	gi|289596519|ref|YP_003483215.1|	-	0.06	12.8	0.0	0.086	12.3	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_22	PF13401.1	gi|289596519|ref|YP_003483215.1|	-	0.11	12.6	2.6	2.8	8.1	1.8	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289596519|ref|YP_003483215.1|	-	0.13	11.7	0.1	11	5.2	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
CbiA	PF01656.18	gi|289596519|ref|YP_003483215.1|	-	1.2	8.5	3.3	16	4.8	0.3	2.3	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.22	gi|289596520|ref|YP_003483216.1|	-	3.4e-35	121.3	0.0	4.6e-35	120.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596520|ref|YP_003483216.1|	-	3.7e-19	68.8	0.1	8e-19	67.7	0.1	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289596520|ref|YP_003483216.1|	-	7.2e-07	29.4	0.0	0.00018	21.5	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|289596520|ref|YP_003483216.1|	-	0.00025	21.1	0.7	0.0039	17.3	0.5	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|289596520|ref|YP_003483216.1|	-	0.016	15.5	0.0	0.029	14.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|289596520|ref|YP_003483216.1|	-	0.025	14.5	0.1	0.043	13.7	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|289596520|ref|YP_003483216.1|	-	0.087	13.6	0.0	0.17	12.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|289596520|ref|YP_003483216.1|	-	0.087	11.2	0.0	4.8	5.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
tRNA-synt_2	PF00152.15	gi|289596521|ref|YP_003483217.1|	-	1.2e-82	277.4	0.1	1.9e-82	276.7	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|289596521|ref|YP_003483217.1|	-	8.3e-14	51.2	2.0	1.7e-13	50.1	1.4	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DUF835	PF05763.7	gi|289596522|ref|YP_003483218.1|	-	2.3e-15	56.3	0.2	1.1e-14	54.0	0.1	2.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
Anticodon_1	PF08264.8	gi|289596522|ref|YP_003483218.1|	-	2e-11	43.8	0.1	6.8e-11	42.1	0.1	2.0	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
zf-ribbon_3	PF13248.1	gi|289596522|ref|YP_003483218.1|	-	1.1e-09	37.1	21.8	2.6e-07	29.6	2.8	4.0	4	1	0	4	4	4	2	zinc-ribbon	domain
DZR	PF12773.2	gi|289596522|ref|YP_003483218.1|	-	8.1e-09	35.1	6.8	2.1e-05	24.2	0.1	3.4	3	1	0	3	3	3	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|289596522|ref|YP_003483218.1|	-	7.3e-07	28.4	2.7	7.3e-07	28.4	1.9	4.4	4	1	1	5	5	5	1	zinc-ribbon	domain
HHH_5	PF14520.1	gi|289596522|ref|YP_003483218.1|	-	1.5e-05	25.0	0.1	0.00024	21.2	0.0	3.1	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
zf-TFIIB	PF13453.1	gi|289596522|ref|YP_003483218.1|	-	0.0055	15.8	5.5	6.4	6.0	0.0	5.4	5	1	0	5	5	5	1	Transcription	factor	zinc-finger
Prok-RING_1	PF14446.1	gi|289596522|ref|YP_003483218.1|	-	0.016	14.9	1.7	0.016	14.9	1.2	3.9	4	1	0	4	4	4	0	Prokaryotic	RING	finger	family	1
zf-NADH-PPase	PF09297.6	gi|289596522|ref|YP_003483218.1|	-	0.017	14.5	0.2	0.017	14.5	0.1	5.1	5	1	1	6	6	6	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF4332	PF14229.1	gi|289596522|ref|YP_003483218.1|	-	0.058	13.3	0.0	0.22	11.4	0.0	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4332)
DUF2616	PF11077.3	gi|289596522|ref|YP_003483218.1|	-	0.11	11.9	1.2	5.8	6.3	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2616)
zf-DHHC	PF01529.15	gi|289596522|ref|YP_003483218.1|	-	0.12	11.7	0.4	4.8	6.5	0.1	2.3	2	0	0	2	2	2	0	DHHC	palmitoyltransferase
YhfH	PF14149.1	gi|289596522|ref|YP_003483218.1|	-	0.47	10.2	12.4	0.22	11.3	0.2	4.4	5	0	0	5	5	5	0	YhfH-like	protein
RecR	PF02132.10	gi|289596522|ref|YP_003483218.1|	-	1	8.8	17.5	0.25	10.7	0.1	5.1	5	1	0	5	5	5	0	RecR	protein
Rad50_zn_hook	PF04423.9	gi|289596522|ref|YP_003483218.1|	-	1.1	8.8	17.2	2.8	7.5	0.6	5.7	5	1	0	5	5	5	0	Rad50	zinc	hook	motif
Nudix_N_2	PF14803.1	gi|289596522|ref|YP_003483218.1|	-	1.6	8.4	21.0	1.9	8.2	0.0	5.7	6	0	0	6	6	6	0	Nudix	N-terminal
zf-C4_Topoisom	PF01396.14	gi|289596522|ref|YP_003483218.1|	-	3.6	7.1	14.7	5.8	6.4	0.1	5.1	5	0	0	5	5	5	0	Topoisomerase	DNA	binding	C4	zinc	finger
tRNA-synt_1g	PF09334.6	gi|289596522|ref|YP_003483218.1|	-	4.8	5.7	10.0	0.48	9.0	0.1	3.4	5	0	0	5	5	5	0	tRNA	synthetases	class	I	(M)
GFA	PF04828.9	gi|289596522|ref|YP_003483218.1|	-	6.8	6.7	8.3	5	7.1	0.4	3.9	3	2	1	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
DNA_ligase_ZBD	PF03119.11	gi|289596522|ref|YP_003483218.1|	-	6.9	6.4	19.7	24	4.7	0.3	5.3	5	0	0	5	5	5	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF126	PF01989.11	gi|289596523|ref|YP_003483219.1|	-	3.5e-21	74.6	0.0	5.2e-21	74.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF126
DUF521	PF04412.8	gi|289596524|ref|YP_003483220.1|	-	5e-131	436.9	0.0	5.6e-131	436.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
AICARFT_IMPCHas	PF01808.13	gi|289596525|ref|YP_003483221.1|	-	1.8e-112	375.5	0.2	2.2e-112	375.1	0.1	1.1	1	0	0	1	1	1	1	AICARFT/IMPCHase	bienzyme
MGS	PF02142.17	gi|289596525|ref|YP_003483221.1|	-	2.5e-21	75.4	0.3	1.1e-20	73.3	0.1	2.2	2	0	0	2	2	2	1	MGS-like	domain
DRTGG	PF07085.7	gi|289596525|ref|YP_003483221.1|	-	0.033	13.7	0.1	1.6	8.4	0.1	3.0	2	1	0	2	2	2	0	DRTGG	domain
Response_reg	PF00072.19	gi|289596526|ref|YP_003483222.1|	-	1.8e-14	53.6	0.0	2.5e-14	53.2	0.0	1.3	1	1	0	1	1	1	1	Response	regulator	receiver	domain
5_3_exonuc_N	PF02739.11	gi|289596526|ref|YP_003483222.1|	-	0.0097	15.2	0.0	1.3	8.3	0.0	2.1	2	0	0	2	2	2	2	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
TPR_12	PF13424.1	gi|289596528|ref|YP_003483224.1|	-	3e-31	107.1	19.2	3.2e-12	46.2	1.4	6.5	4	2	4	8	8	7	6	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596528|ref|YP_003483224.1|	-	1.7e-16	59.6	13.2	7.3e-06	25.5	1.4	5.9	3	1	3	6	6	6	4	TPR	repeat
TPR_2	PF07719.12	gi|289596528|ref|YP_003483224.1|	-	6.1e-16	56.9	37.5	0.0017	18.1	0.6	9.0	9	1	0	9	9	8	5	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|289596528|ref|YP_003483224.1|	-	1.2e-13	50.0	32.9	0.00035	20.0	0.5	7.9	8	0	0	8	8	8	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289596528|ref|YP_003483224.1|	-	5e-13	47.8	41.6	0.00018	21.0	0.5	8.7	8	1	0	8	8	8	5	Tetratricopeptide	repeat
AAA_22	PF13401.1	gi|289596528|ref|YP_003483224.1|	-	4.9e-10	39.6	0.1	1.4e-09	38.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289596528|ref|YP_003483224.1|	-	2.2e-07	30.8	2.0	2.2e-07	30.8	1.4	3.1	2	2	1	3	3	2	1	AAA	domain
TPR_16	PF13432.1	gi|289596528|ref|YP_003483224.1|	-	3.4e-07	30.7	1.0	0.18	12.5	0.2	4.4	4	1	0	4	4	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289596528|ref|YP_003483224.1|	-	1.8e-06	28.0	0.1	20	6.1	0.0	6.8	7	0	0	7	7	6	0	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289596528|ref|YP_003483224.1|	-	5e-06	26.2	0.4	3.5	7.7	0.0	5.9	6	0	0	6	6	6	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289596528|ref|YP_003483224.1|	-	5.9e-06	25.6	8.7	0.097	12.5	0.1	5.9	6	0	0	6	6	5	1	Tetratricopeptide	repeat
AAA_16	PF13191.1	gi|289596528|ref|YP_003483224.1|	-	8.2e-06	25.9	0.0	8.3e-05	22.6	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
Apc5	PF12862.2	gi|289596528|ref|YP_003483224.1|	-	0.00034	20.3	0.0	0.011	15.6	0.0	2.8	1	1	1	2	2	2	1	Anaphase-promoting	complex	subunit	5
Apc3	PF12895.2	gi|289596528|ref|YP_003483224.1|	-	0.00043	20.3	0.1	0.0095	16.0	0.0	4.6	2	1	3	5	5	4	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|289596528|ref|YP_003483224.1|	-	0.00057	20.1	0.1	2.2	8.6	0.0	4.0	2	1	2	4	4	4	2	Tetratricopeptide	repeat
DUF258	PF03193.11	gi|289596528|ref|YP_003483224.1|	-	0.0018	17.4	0.0	0.004	16.3	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
HTH_Crp_2	PF13545.1	gi|289596528|ref|YP_003483224.1|	-	0.0028	17.3	0.0	0.0087	15.8	0.0	1.8	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
KaiC	PF06745.8	gi|289596528|ref|YP_003483224.1|	-	0.0034	16.5	1.5	0.0046	16.1	0.2	1.9	2	0	0	2	2	2	1	KaiC
SNAP	PF14938.1	gi|289596528|ref|YP_003483224.1|	-	0.018	14.1	10.5	0.41	9.7	0.3	3.5	1	1	2	3	3	3	0	Soluble	NSF	attachment	protein,	SNAP
cobW	PF02492.14	gi|289596528|ref|YP_003483224.1|	-	0.019	14.4	0.2	0.8	9.1	0.1	2.3	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|289596528|ref|YP_003483224.1|	-	0.022	13.6	1.5	0.092	11.5	1.0	2.1	1	1	0	1	1	1	0	NB-ARC	domain
TPR_6	PF13174.1	gi|289596528|ref|YP_003483224.1|	-	0.028	14.8	15.1	8.7	7.0	0.0	7.2	8	0	0	8	8	7	0	Tetratricopeptide	repeat
AAA	PF00004.24	gi|289596528|ref|YP_003483224.1|	-	0.03	14.5	0.1	0.1	12.7	0.0	2.0	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.17	gi|289596528|ref|YP_003483224.1|	-	0.043	13.2	0.0	0.11	11.9	0.0	1.7	2	0	0	2	2	1	0	SRP54-type	protein,	GTPase	domain
NACHT	PF05729.7	gi|289596528|ref|YP_003483224.1|	-	0.047	13.3	0.8	0.17	11.5	0.6	1.9	1	1	0	1	1	1	0	NACHT	domain
ResIII	PF04851.10	gi|289596528|ref|YP_003483224.1|	-	0.06	13.1	0.2	0.26	11.1	0.1	2.0	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AA_kinase	PF00696.23	gi|289596528|ref|YP_003483224.1|	-	0.098	12.1	0.0	0.28	10.7	0.0	1.8	1	1	0	1	1	1	0	Amino	acid	kinase	family
T2SE	PF00437.15	gi|289596528|ref|YP_003483224.1|	-	0.12	11.2	0.0	0.22	10.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PPR	PF01535.15	gi|289596528|ref|YP_003483224.1|	-	0.71	9.9	9.6	3.8	7.6	0.0	4.8	5	0	0	5	5	3	0	PPR	repeat
Metallophos	PF00149.23	gi|289596529|ref|YP_003483225.1|	-	8.4e-19	67.7	0.1	1.3e-18	67.1	0.1	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|289596529|ref|YP_003483225.1|	-	6.2e-16	58.6	0.0	1e-15	57.9	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
AAA_23	PF13476.1	gi|289596530|ref|YP_003483226.1|	-	6.1e-18	65.8	34.9	6.1e-18	65.8	24.2	5.7	1	1	2	4	4	2	1	AAA	domain
SMC_N	PF02463.14	gi|289596530|ref|YP_003483226.1|	-	5e-08	32.4	29.8	2.4e-05	23.7	0.0	3.1	2	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Rad50_zn_hook	PF04423.9	gi|289596530|ref|YP_003483226.1|	-	1.1e-07	31.1	6.7	1.1e-07	31.1	4.6	9.3	12	1	0	12	12	11	1	Rad50	zinc	hook	motif
AAA_29	PF13555.1	gi|289596530|ref|YP_003483226.1|	-	1.7e-06	27.4	0.0	3e-06	26.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NPV_P10	PF05531.7	gi|289596530|ref|YP_003483226.1|	-	7.9e-05	22.8	22.9	0.066	13.4	0.1	7.0	4	2	3	7	7	7	2	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.6	gi|289596530|ref|YP_003483226.1|	-	8e-05	21.4	99.9	0.0047	15.6	9.2	5.3	1	1	4	5	5	5	4	Spc7	kinetochore	protein
AAA_13	PF13166.1	gi|289596530|ref|YP_003483226.1|	-	9e-05	21.1	94.5	0.0057	15.1	26.2	5.1	2	1	3	5	5	5	4	AAA	domain
IncA	PF04156.9	gi|289596530|ref|YP_003483226.1|	-	0.00017	21.2	92.5	0.028	14.0	9.3	5.0	1	1	3	4	4	4	2	IncA	protein
SbcCD_C	PF13558.1	gi|289596530|ref|YP_003483226.1|	-	0.00018	21.3	0.0	0.00059	19.6	0.0	1.9	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
Tropomyosin_1	PF12718.2	gi|289596530|ref|YP_003483226.1|	-	0.00053	19.8	31.5	0.00053	19.8	21.8	5.5	1	1	4	5	5	4	2	Tropomyosin	like
Reo_sigmaC	PF04582.7	gi|289596530|ref|YP_003483226.1|	-	0.00096	18.4	4.7	0.23	10.6	0.3	4.2	2	1	0	4	4	4	1	Reovirus	sigma	C	capsid	protein
TPR_MLP1_2	PF07926.7	gi|289596530|ref|YP_003483226.1|	-	0.0017	18.1	89.8	0.011	15.4	10.6	4.7	2	2	2	4	4	4	2	TPR/MLP1/MLP2-like	protein
DASH_Dam1	PF08653.5	gi|289596530|ref|YP_003483226.1|	-	0.059	13.1	0.2	0.059	13.1	0.1	5.4	5	1	1	6	6	5	0	DASH	complex	subunit	Dam1
Auto_anti-p27	PF06677.7	gi|289596530|ref|YP_003483226.1|	-	0.075	12.8	0.2	0.17	11.7	0.2	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
GAS	PF13851.1	gi|289596530|ref|YP_003483226.1|	-	0.098	11.8	111.3	0.052	12.7	6.6	6.8	1	1	4	6	6	6	0	Growth-arrest	specific	micro-tubule	binding
ALIX_LYPXL_bnd	PF13949.1	gi|289596530|ref|YP_003483226.1|	-	0.28	10.0	68.9	0.028	13.3	14.0	3.3	1	1	2	3	3	3	0	ALIX	V-shaped	domain	binding	to	HIV
AAA_16	PF13191.1	gi|289596530|ref|YP_003483226.1|	-	1.6	8.6	6.1	4.4	7.2	0.0	3.9	4	1	1	5	5	5	0	AAA	ATPase	domain
AAA_27	PF13514.1	gi|289596530|ref|YP_003483226.1|	-	3.5	5.1	71.2	0.23	9.1	16.9	3.3	1	1	2	3	3	3	0	AAA	domain
Corona_S2	PF01601.11	gi|289596530|ref|YP_003483226.1|	-	3.8	5.4	15.3	0.7	7.9	1.5	3.3	3	0	0	3	3	3	0	Coronavirus	S2	glycoprotein
Phage_GP20	PF06810.6	gi|289596530|ref|YP_003483226.1|	-	4.9	6.5	91.7	0.014	14.8	8.5	6.7	2	2	5	7	7	7	0	Phage	minor	structural	protein	GP20
Sec20	PF03908.8	gi|289596530|ref|YP_003483226.1|	-	6	6.6	26.8	0.45	10.2	0.5	6.3	3	2	3	6	6	6	0	Sec20
Occludin_ELL	PF07303.8	gi|289596530|ref|YP_003483226.1|	-	7	7.4	78.8	0.072	13.8	7.8	6.8	1	1	4	6	6	6	0	Occludin	homology	domain
YwiC	PF14256.1	gi|289596531|ref|YP_003483227.1|	-	0.007	16.4	1.4	0.007	16.4	1.0	1.8	2	0	0	2	2	2	1	YwiC-like	protein
EmrE	PF13536.1	gi|289596531|ref|YP_003483227.1|	-	0.025	14.7	5.9	0.025	14.7	4.1	1.8	2	0	0	2	2	2	0	Multidrug	resistance	efflux	transporter
TMEM223	PF14640.1	gi|289596531|ref|YP_003483227.1|	-	0.032	14.1	0.2	0.058	13.3	0.2	1.4	1	0	0	1	1	1	0	Transmembrane	protein	223
DUF4131	PF13567.1	gi|289596531|ref|YP_003483227.1|	-	0.065	12.6	3.7	0.057	12.8	0.4	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF4064	PF13273.1	gi|289596531|ref|YP_003483227.1|	-	0.067	13.2	6.8	0.33	11.0	2.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
VanZ	PF04892.7	gi|289596532|ref|YP_003483228.1|	-	2.3e-08	34.0	3.1	4.2e-08	33.2	2.1	1.4	1	1	0	1	1	1	1	VanZ	like	family
MARVEL	PF01284.18	gi|289596532|ref|YP_003483228.1|	-	9.8	5.9	10.2	62	3.3	7.1	2.0	1	1	0	1	1	1	0	Membrane-associating	domain
TPR_1	PF00515.23	gi|289596533|ref|YP_003483229.1|	-	3.7e-82	266.8	61.2	3.1e-09	36.0	0.7	15.6	16	0	0	16	16	15	12	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596533|ref|YP_003483229.1|	-	4.8e-73	240.7	47.9	6.1e-17	61.0	2.0	10.7	5	4	3	9	9	9	9	TPR	repeat
TPR_2	PF07719.12	gi|289596533|ref|YP_003483229.1|	-	7.1e-72	231.6	60.3	2.9e-08	33.0	0.2	16.6	16	1	1	17	17	16	13	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|289596533|ref|YP_003483229.1|	-	1.8e-51	168.1	70.0	5.5e-07	28.9	0.1	16.0	11	3	6	17	17	17	12	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289596533|ref|YP_003483229.1|	-	4.3e-48	161.0	16.7	4.8e-12	46.1	0.4	10.3	7	3	4	11	11	11	6	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|289596533|ref|YP_003483229.1|	-	4.7e-47	157.8	33.1	4.8e-10	39.2	0.3	12.2	7	3	3	11	11	11	8	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|289596533|ref|YP_003483229.1|	-	7.4e-43	144.5	29.5	1.5e-09	37.8	0.6	7.6	5	1	1	7	7	7	7	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_17	PF13431.1	gi|289596533|ref|YP_003483229.1|	-	3.6e-42	139.0	39.2	1.7e-06	27.7	0.3	13.7	13	1	0	13	13	13	7	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289596533|ref|YP_003483229.1|	-	2.4e-41	139.9	17.7	1.2e-08	35.1	0.1	10.3	5	5	4	10	10	10	8	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289596533|ref|YP_003483229.1|	-	8.8e-40	131.3	29.4	0.00014	21.3	0.0	16.0	14	1	2	16	16	16	6	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289596533|ref|YP_003483229.1|	-	1.3e-39	130.9	3.7	0.00076	19.8	0.0	14.0	4	3	11	15	15	14	8	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|289596533|ref|YP_003483229.1|	-	2.7e-25	87.4	16.7	0.0016	18.3	0.0	13.0	14	0	0	14	14	13	4	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|289596533|ref|YP_003483229.1|	-	2.4e-21	74.6	32.0	0.0053	17.1	0.0	13.0	14	0	0	14	14	13	4	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289596533|ref|YP_003483229.1|	-	3e-20	71.8	1.1	1.6e-05	24.6	0.1	7.3	6	2	2	8	8	7	4	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|289596533|ref|YP_003483229.1|	-	8.1e-12	44.3	0.0	0.52	10.8	0.5	8.3	9	0	0	9	9	8	1	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|289596533|ref|YP_003483229.1|	-	4.5e-11	42.3	9.7	8.1e-10	38.2	1.3	3.7	3	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|289596533|ref|YP_003483229.1|	-	4.8e-08	33.0	1.9	1.5	9.0	0.0	7.4	6	3	2	9	9	8	1	Tetratricopeptide	repeat
Apc5	PF12862.2	gi|289596533|ref|YP_003483229.1|	-	3.8e-07	29.8	4.5	0.011	15.5	0.0	6.1	6	1	1	7	7	6	1	Anaphase-promoting	complex	subunit	5
TPR_21	PF09976.4	gi|289596533|ref|YP_003483229.1|	-	4.4e-07	29.9	4.1	0.033	14.1	0.1	6.4	6	2	0	7	7	7	1	Tetratricopeptide	repeat
DUF3856	PF12968.2	gi|289596533|ref|YP_003483229.1|	-	3.7e-06	26.8	11.9	0.082	12.7	0.1	6.6	4	2	2	6	6	5	2	Domain	of	Unknown	Function	(DUF3856)
PPR	PF01535.15	gi|289596533|ref|YP_003483229.1|	-	5.4e-06	26.0	27.0	4.1	7.5	0.0	11.8	13	0	0	13	13	12	0	PPR	repeat
MIT	PF04212.13	gi|289596533|ref|YP_003483229.1|	-	9.7e-06	25.3	26.4	0.68	9.8	0.2	8.9	9	1	0	9	9	7	2	MIT	(microtubule	interacting	and	transport)	domain
BTAD	PF03704.12	gi|289596533|ref|YP_003483229.1|	-	0.00062	20.0	4.1	23	5.2	0.1	5.3	4	2	1	5	5	5	0	Bacterial	transcriptional	activator	domain
Rapsyn_N	PF10579.4	gi|289596533|ref|YP_003483229.1|	-	0.001	18.8	5.7	23	4.8	0.0	6.9	6	4	3	9	9	8	0	Rapsyn	N-terminal	myristoylation	and	linker	region
TPR_3	PF07720.7	gi|289596533|ref|YP_003483229.1|	-	0.0013	18.5	30.5	0.34	10.7	0.5	9.5	11	1	0	11	11	10	2	Tetratricopeptide	repeat
RPN7	PF10602.4	gi|289596533|ref|YP_003483229.1|	-	0.0013	18.1	17.4	0.42	9.9	0.6	6.8	5	2	3	8	8	8	1	26S	proteasome	subunit	RPN7
PPTA	PF01239.17	gi|289596533|ref|YP_003483229.1|	-	0.0039	16.4	7.7	1.8	8.0	0.0	4.8	5	0	0	5	5	4	1	Protein	prenyltransferase	alpha	subunit	repeat
Fis1_TPR_C	PF14853.1	gi|289596533|ref|YP_003483229.1|	-	0.0039	17.0	0.0	0.0039	17.0	0.0	12.8	13	3	4	17	17	16	3	Fis1	C-terminal	tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|289596533|ref|YP_003483229.1|	-	0.0043	16.2	6.1	0.23	10.6	0.1	4.8	4	2	3	7	7	7	2	Coatomer	epsilon	subunit
Paf67	PF10255.4	gi|289596533|ref|YP_003483229.1|	-	0.0083	15.0	7.8	0.74	8.6	0.1	5.1	5	1	1	6	6	6	1	RNA	polymerase	I-associated	factor	PAF67
SHNi-TPR	PF10516.4	gi|289596533|ref|YP_003483229.1|	-	0.031	13.5	4.4	0.047	12.9	0.1	3.7	6	0	0	6	6	2	0	SHNi-TPR
FAT	PF02259.18	gi|289596533|ref|YP_003483229.1|	-	0.034	13.1	9.5	2.1	7.2	3.8	4.0	2	1	1	3	3	3	0	FAT	domain
EST1_DNA_bind	PF10373.4	gi|289596533|ref|YP_003483229.1|	-	0.035	13.3	5.6	0.51	9.5	0.8	3.1	2	1	0	2	2	2	0	Est1	DNA/RNA	binding	domain
ChAPs	PF09295.5	gi|289596533|ref|YP_003483229.1|	-	0.036	12.8	0.0	5.4	5.6	0.0	2.6	1	1	1	2	2	2	0	ChAPs	(Chs5p-Arf1p-binding	proteins)
PPR_2	PF13041.1	gi|289596533|ref|YP_003483229.1|	-	0.037	14.0	9.4	2.9	7.9	0.0	6.5	9	0	0	9	9	6	0	PPR	repeat	family
Pep3_Vps18	PF05131.9	gi|289596533|ref|YP_003483229.1|	-	0.13	11.6	0.7	14	5.0	0.0	3.9	4	0	0	4	4	3	0	Pep3/Vps18/deep	orange	family
Clathrin	PF00637.15	gi|289596533|ref|YP_003483229.1|	-	0.71	9.4	15.0	1.8	8.1	0.8	5.0	3	2	2	5	5	5	0	Region	in	Clathrin	and	VPS
SPOB_a	PF14689.1	gi|289596533|ref|YP_003483229.1|	-	5.2	6.7	19.6	1.1	8.8	0.1	7.3	10	0	0	10	10	9	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
PUA	PF01472.15	gi|289596534|ref|YP_003483230.1|	-	2.3e-21	75.3	0.8	2.3e-21	75.3	0.6	1.5	2	0	0	2	2	2	1	PUA	domain
Ribosomal_60s	PF00428.14	gi|289596535|ref|YP_003483231.1|	-	2.4e-17	63.1	22.6	2.7e-17	62.9	15.6	1.0	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
Sigma70_ner	PF04546.8	gi|289596535|ref|YP_003483231.1|	-	0.028	14.0	6.3	0.034	13.7	4.3	1.2	1	0	0	1	1	1	0	Sigma-70,	non-essential	region
Rox3	PF08633.5	gi|289596535|ref|YP_003483231.1|	-	0.066	13.5	0.0	0.078	13.2	0.0	1.0	1	0	0	1	1	1	0	Rox3	mediator	complex	subunit
RNase_H2-Ydr279	PF09468.5	gi|289596535|ref|YP_003483231.1|	-	0.19	10.9	2.3	0.21	10.7	1.6	1.1	1	0	0	1	1	1	0	Ydr279p	protein	family	(RNase	H2	complex	component)
DUF3408	PF11888.3	gi|289596535|ref|YP_003483231.1|	-	0.21	11.5	3.1	0.28	11.0	2.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3408)
YqfQ	PF14181.1	gi|289596535|ref|YP_003483231.1|	-	0.22	11.5	2.8	0.26	11.3	1.9	1.2	1	0	0	1	1	1	0	YqfQ-like	protein
GGDN	PF05165.7	gi|289596535|ref|YP_003483231.1|	-	0.26	10.3	1.6	0.31	10.0	1.1	1.1	1	0	0	1	1	1	0	GGDN	family
Med2	PF11214.3	gi|289596535|ref|YP_003483231.1|	-	0.33	11.0	4.9	0.44	10.6	3.4	1.3	1	0	0	1	1	1	0	Mediator	complex	subunit	2
Myc_N	PF01056.13	gi|289596535|ref|YP_003483231.1|	-	0.37	9.9	5.8	0.44	9.6	4.0	1.1	1	0	0	1	1	1	0	Myc	amino-terminal	region
CENP-B_dimeris	PF09026.5	gi|289596535|ref|YP_003483231.1|	-	0.62	10.3	4.1	1.1	9.5	2.8	1.4	1	0	0	1	1	1	0	Centromere	protein	B	dimerisation	domain
Cytomega_UL84	PF06284.6	gi|289596535|ref|YP_003483231.1|	-	0.77	8.1	3.5	0.86	7.9	2.5	1.1	1	0	0	1	1	1	0	Cytomegalovirus	UL84	protein
Radial_spoke	PF04712.7	gi|289596535|ref|YP_003483231.1|	-	7.9	5.1	9.6	10	4.7	6.6	1.1	1	0	0	1	1	1	0	Radial	spokehead-like	protein
Ribosomal_L10	PF00466.15	gi|289596536|ref|YP_003483232.1|	-	9.7e-25	86.4	1.9	1.9e-24	85.4	1.3	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L10
7TMR-HDED	PF07697.6	gi|289596536|ref|YP_003483232.1|	-	0.0018	18.0	0.5	0.0018	18.0	0.3	2.6	3	1	0	3	3	3	1	7TM-HD	extracellular
DUF2951	PF11166.3	gi|289596536|ref|YP_003483232.1|	-	4.4	7.2	7.9	0.45	10.3	0.5	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
Ribosomal_L1	PF00687.16	gi|289596537|ref|YP_003483233.1|	-	1.2e-48	165.3	0.6	1.5e-48	165.0	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L11_N	PF03946.9	gi|289596538|ref|YP_003483234.1|	-	2.5e-25	87.7	2.4	5.7e-25	86.5	1.7	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|289596538|ref|YP_003483234.1|	-	3.5e-25	87.9	0.6	3.5e-25	87.9	0.4	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L11,	RNA	binding	domain
DltD_C	PF04914.7	gi|289596538|ref|YP_003483234.1|	-	0.14	12.0	0.2	12	5.7	0.0	2.1	1	1	1	2	2	2	0	DltD	C-terminal	region
Spt5-NGN	PF03439.8	gi|289596539|ref|YP_003483235.1|	-	1.5e-20	72.6	0.6	3.9e-20	71.3	0.1	2.0	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|289596539|ref|YP_003483235.1|	-	2.2e-05	23.9	0.6	2.2e-05	23.9	0.4	2.6	3	0	0	3	3	3	1	KOW	motif
NusG	PF02357.14	gi|289596539|ref|YP_003483235.1|	-	0.0016	18.6	1.2	0.0072	16.5	0.0	2.7	3	1	0	3	3	3	1	Transcription	termination	factor	nusG
Transglut_N	PF00868.15	gi|289596539|ref|YP_003483235.1|	-	0.0035	17.3	0.2	0.12	12.4	0.0	2.3	1	1	1	2	2	2	2	Transglutaminase	family
DUF4312	PF14189.1	gi|289596539|ref|YP_003483235.1|	-	0.047	13.5	1.3	0.1	12.4	0.9	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4312)
DUF916	PF06030.7	gi|289596539|ref|YP_003483235.1|	-	0.059	13.1	0.1	0.16	11.7	0.1	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF916)
Flo11	PF10182.4	gi|289596539|ref|YP_003483235.1|	-	0.12	11.9	0.1	0.19	11.3	0.1	1.2	1	0	0	1	1	1	0	Flo11	domain
SecE	PF00584.15	gi|289596540|ref|YP_003483236.1|	-	0.12	11.9	0.0	0.17	11.4	0.0	1.2	1	0	0	1	1	1	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Tubulin	PF00091.20	gi|289596541|ref|YP_003483237.1|	-	8e-36	123.8	0.2	3e-35	121.9	0.1	1.8	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|289596541|ref|YP_003483237.1|	-	7.2e-34	115.7	2.2	1.9e-33	114.4	1.5	1.7	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
ThiF	PF00899.16	gi|289596541|ref|YP_003483237.1|	-	0.028	14.2	0.1	0.1	12.4	0.1	1.9	2	0	0	2	2	2	0	ThiF	family
RuvA_C	PF07499.8	gi|289596541|ref|YP_003483237.1|	-	0.42	10.8	2.2	34	4.6	0.1	3.2	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
Na_H_Exchanger	PF00999.16	gi|289596542|ref|YP_003483238.1|	-	1.6e-52	178.3	42.7	2.3e-52	177.8	29.6	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.13	gi|289596542|ref|YP_003483238.1|	-	3e-20	72.3	0.2	4.6e-20	71.7	0.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
ApbA	PF02558.11	gi|289596542|ref|YP_003483238.1|	-	0.0015	17.9	0.1	0.0024	17.3	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|289596542|ref|YP_003483238.1|	-	0.089	12.1	0.1	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
adh_short	PF00106.20	gi|289596543|ref|YP_003483239.1|	-	4.3e-27	95.0	0.0	5.6e-27	94.6	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|289596543|ref|YP_003483239.1|	-	2e-26	93.2	0.0	2.4e-26	92.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|289596543|ref|YP_003483239.1|	-	4e-05	23.3	0.0	5.8e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|289596543|ref|YP_003483239.1|	-	0.00076	18.9	0.0	0.0069	15.8	0.0	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|289596543|ref|YP_003483239.1|	-	0.034	12.8	0.0	0.045	12.4	0.0	1.2	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
3HCDH_N	PF02737.13	gi|289596543|ref|YP_003483239.1|	-	0.046	13.3	0.0	0.12	11.9	0.0	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Eno-Rase_NADH_b	PF12242.3	gi|289596543|ref|YP_003483239.1|	-	0.047	13.4	0.1	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
PC-Esterase	PF13839.1	gi|289596543|ref|YP_003483239.1|	-	0.14	11.9	0.0	0.2	11.4	0.0	1.2	1	0	0	1	1	1	0	GDSL/SGNH-like	Acyl-Esterase	family	found	in	Pmr5	and	Cas1p
NUDIX	PF00293.23	gi|289596544|ref|YP_003483240.1|	-	7.4e-15	54.7	0.0	8.9e-15	54.5	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Asp_Glu_race	PF01177.17	gi|289596545|ref|YP_003483241.1|	-	6.9e-29	101.2	0.0	1.1e-28	100.6	0.0	1.3	1	1	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
BRCT	PF00533.21	gi|289596545|ref|YP_003483241.1|	-	0.0035	17.4	0.1	0.6	10.2	0.0	2.3	2	0	0	2	2	2	2	BRCA1	C	Terminus	(BRCT)	domain
UDPG_MGDP_dh_C	PF03720.10	gi|289596545|ref|YP_003483241.1|	-	0.012	15.7	0.4	3.1	7.9	0.0	2.5	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Isochorismatase	PF00857.15	gi|289596545|ref|YP_003483241.1|	-	0.075	12.9	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Isochorismatase	family
TroA	PF01297.12	gi|289596545|ref|YP_003483241.1|	-	0.11	11.7	0.1	0.21	10.7	0.1	1.5	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
SfsA	PF03749.8	gi|289596546|ref|YP_003483242.1|	-	8.9e-66	221.4	0.0	1.1e-65	221.1	0.0	1.0	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
HTH_AsnC-type	PF13404.1	gi|289596547|ref|YP_003483243.1|	-	8.1e-17	60.4	0.1	1.3e-16	59.7	0.1	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596547|ref|YP_003483243.1|	-	1.3e-15	56.4	0.5	2e-15	55.8	0.4	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|289596547|ref|YP_003483243.1|	-	7.2e-11	41.5	0.7	1.2e-10	40.8	0.5	1.4	1	0	0	1	1	1	1	HTH	domain
AsnC_trans_reg	PF01037.16	gi|289596547|ref|YP_003483243.1|	-	2.3e-10	40.0	0.0	5.6e-10	38.7	0.0	1.6	2	0	0	2	2	2	1	AsnC	family
HTH_Mga	PF08280.6	gi|289596547|ref|YP_003483243.1|	-	3e-06	26.8	0.0	5.1e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_20	PF12840.2	gi|289596547|ref|YP_003483243.1|	-	9.2e-06	25.3	0.0	1.6e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|289596547|ref|YP_003483243.1|	-	1.9e-05	24.0	0.3	3.5e-05	23.2	0.2	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
MarR	PF01047.17	gi|289596547|ref|YP_003483243.1|	-	2.7e-05	23.7	0.1	5.8e-05	22.7	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|289596547|ref|YP_003483243.1|	-	4.7e-05	23.0	0.0	9.1e-05	22.1	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HxlR	PF01638.12	gi|289596547|ref|YP_003483243.1|	-	4.8e-05	22.9	0.5	9.4e-05	21.9	0.2	1.6	2	0	0	2	2	1	1	HxlR-like	helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|289596547|ref|YP_003483243.1|	-	5.7e-05	22.4	0.2	0.00013	21.3	0.0	1.7	2	0	0	2	2	1	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|289596547|ref|YP_003483243.1|	-	6.4e-05	22.4	0.1	0.00013	21.4	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
TFIIE_alpha	PF02002.12	gi|289596547|ref|YP_003483243.1|	-	0.00021	20.7	0.2	0.0011	18.4	0.1	1.9	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_38	PF13936.1	gi|289596547|ref|YP_003483243.1|	-	0.0004	19.8	0.3	0.00087	18.8	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|289596547|ref|YP_003483243.1|	-	0.00053	19.2	0.1	0.00089	18.5	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
MarR_2	PF12802.2	gi|289596547|ref|YP_003483243.1|	-	0.00054	19.5	0.0	0.00088	18.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
FaeA	PF04703.7	gi|289596547|ref|YP_003483243.1|	-	0.00094	19.2	0.2	0.0021	18.1	0.1	1.6	1	0	0	1	1	1	1	FaeA-like	protein
GntR	PF00392.16	gi|289596547|ref|YP_003483243.1|	-	0.0012	18.1	0.1	0.0024	17.2	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Tnp_ISL3	PF13542.1	gi|289596547|ref|YP_003483243.1|	-	0.0017	17.4	0.0	0.003	16.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
TrmB	PF01978.14	gi|289596547|ref|YP_003483243.1|	-	0.002	17.7	0.2	0.0032	17.1	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|289596547|ref|YP_003483243.1|	-	0.0032	17.4	0.1	0.0053	16.7	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|289596547|ref|YP_003483243.1|	-	0.0032	17.7	0.1	0.0065	16.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|289596547|ref|YP_003483243.1|	-	0.0043	16.9	0.0	0.015	15.1	0.0	1.9	2	1	1	3	3	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|289596547|ref|YP_003483243.1|	-	0.0045	16.5	0.0	0.0076	15.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.1	gi|289596547|ref|YP_003483243.1|	-	0.011	15.7	0.0	0.027	14.6	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289596547|ref|YP_003483243.1|	-	0.012	15.2	0.0	0.019	14.5	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|289596547|ref|YP_003483243.1|	-	0.02	14.9	0.0	0.067	13.3	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
DUF977	PF06163.6	gi|289596547|ref|YP_003483243.1|	-	0.024	14.3	0.1	0.038	13.7	0.1	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_29	PF13551.1	gi|289596547|ref|YP_003483243.1|	-	0.033	14.3	0.0	0.054	13.6	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_17	PF12728.2	gi|289596547|ref|YP_003483243.1|	-	0.034	14.3	0.1	0.071	13.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|289596547|ref|YP_003483243.1|	-	0.055	13.0	0.0	0.15	11.6	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_34	PF13601.1	gi|289596547|ref|YP_003483243.1|	-	0.074	13.0	0.0	0.16	12.0	0.0	1.7	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
GerE	PF00196.14	gi|289596547|ref|YP_003483243.1|	-	0.1	11.9	0.0	0.24	10.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_10	PF04967.7	gi|289596547|ref|YP_003483243.1|	-	0.1	12.1	0.3	0.32	10.5	0.0	1.9	2	0	0	2	2	1	0	HTH	DNA	binding	domain
FeoC	PF09012.5	gi|289596547|ref|YP_003483243.1|	-	0.11	12.2	0.0	0.27	10.9	0.0	1.6	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
Stk19	PF10494.4	gi|289596547|ref|YP_003483243.1|	-	0.11	11.9	0.1	0.11	11.9	0.0	1.1	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
Flavin_Reduct	PF01613.13	gi|289596548|ref|YP_003483244.1|	-	1.4e-21	76.9	0.0	1.7e-21	76.7	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Rubrerythrin	PF02915.12	gi|289596549|ref|YP_003483245.1|	-	1e-17	64.7	6.3	3.2e-10	40.4	0.2	2.0	2	0	0	2	2	2	2	Rubrerythrin
Ferritin	PF00210.19	gi|289596549|ref|YP_003483245.1|	-	0.0078	15.9	5.0	0.13	11.9	0.5	2.2	2	0	0	2	2	2	2	Ferritin-like	domain
DUF2383	PF09537.5	gi|289596549|ref|YP_003483245.1|	-	0.23	11.6	2.1	0.37	11.0	0.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2383)
Rubredoxin	PF00301.15	gi|289596550|ref|YP_003483246.1|	-	1.7e-25	88.5	2.8	1.9e-25	88.4	2.0	1.0	1	0	0	1	1	1	1	Rubredoxin
zf-Sec23_Sec24	PF04810.10	gi|289596550|ref|YP_003483246.1|	-	0.0022	17.5	0.7	0.59	9.7	0.0	2.1	2	0	0	2	2	2	2	Sec23/Sec24	zinc	finger
zf-RanBP	PF00641.13	gi|289596550|ref|YP_003483246.1|	-	0.0037	16.3	2.7	0.052	12.6	0.1	2.1	2	0	0	2	2	2	1	Zn-finger	in	Ran	binding	protein	and	others
TF_Zn_Ribbon	PF08271.7	gi|289596550|ref|YP_003483246.1|	-	0.0077	15.5	1.0	1.4	8.3	0.0	2.2	2	0	0	2	2	2	2	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|289596550|ref|YP_003483246.1|	-	0.018	14.2	0.4	0.6	9.3	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2296	PF10058.4	gi|289596550|ref|YP_003483246.1|	-	0.02	14.6	1.6	3.4	7.4	0.0	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-MIZ	PF02891.15	gi|289596550|ref|YP_003483246.1|	-	0.042	13.3	2.7	0.42	10.1	0.1	2.1	2	0	0	2	2	2	0	MIZ/SP-RING	zinc	finger
DUF4379	PF14311.1	gi|289596550|ref|YP_003483246.1|	-	0.071	12.9	0.8	1.5	8.6	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
DZR	PF12773.2	gi|289596550|ref|YP_003483246.1|	-	0.078	12.8	0.4	62	3.5	0.0	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
Desulfoferrod_N	PF06397.7	gi|289596550|ref|YP_003483246.1|	-	0.087	12.2	1.5	0.85	9.0	0.3	2.1	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zinc_ribbon_2	PF13240.1	gi|289596550|ref|YP_003483246.1|	-	0.12	11.8	0.3	2.9	7.5	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-nanos	PF05741.8	gi|289596550|ref|YP_003483246.1|	-	0.14	12.1	0.3	0.74	9.8	0.0	1.9	2	0	0	2	2	2	0	Nanos	RNA	binding	domain
Prim_Zn_Ribbon	PF08273.7	gi|289596550|ref|YP_003483246.1|	-	0.17	12.0	0.9	1.6	8.8	0.1	2.2	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
ADK_lid	PF05191.9	gi|289596550|ref|YP_003483246.1|	-	0.18	11.4	1.4	0.92	9.2	1.0	1.9	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
A2L_zn_ribbon	PF08792.5	gi|289596550|ref|YP_003483246.1|	-	0.21	11.0	2.3	1.4	8.4	0.0	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|289596550|ref|YP_003483246.1|	-	0.25	11.0	1.0	3.4	7.3	0.7	2.0	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Lactamase_B	PF00753.22	gi|289596551|ref|YP_003483247.1|	-	1.1e-27	96.9	0.0	2.3e-27	95.9	0.0	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Flavodoxin_1	PF00258.20	gi|289596551|ref|YP_003483247.1|	-	0.00011	22.2	0.1	0.00033	20.6	0.0	1.9	2	0	0	2	2	2	1	Flavodoxin
Flavodoxin_5	PF12724.2	gi|289596551|ref|YP_003483247.1|	-	0.00035	20.5	0.1	0.0053	16.7	0.0	2.6	3	0	0	3	3	3	1	Flavodoxin	domain
Lactamase_B_2	PF12706.2	gi|289596551|ref|YP_003483247.1|	-	0.00088	18.8	0.2	0.0014	18.1	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
AhpC-TSA	PF00578.16	gi|289596552|ref|YP_003483248.1|	-	2.5e-40	136.9	0.0	3.1e-40	136.7	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|289596552|ref|YP_003483248.1|	-	4.6e-18	65.1	0.0	5.2e-18	64.9	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.9	gi|289596552|ref|YP_003483248.1|	-	0.00025	20.7	0.1	0.00059	19.4	0.1	1.6	1	1	0	1	1	1	1	SCO1/SenC
Thioredoxin_8	PF13905.1	gi|289596552|ref|YP_003483248.1|	-	0.00027	20.9	0.0	0.00049	20.1	0.0	1.4	2	0	0	2	2	2	1	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|289596552|ref|YP_003483248.1|	-	0.0057	16.5	0.0	0.027	14.3	0.0	1.8	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF2540	PF10802.3	gi|289596552|ref|YP_003483248.1|	-	0.13	11.9	0.1	0.13	11.9	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2540)
Rubrerythrin	PF02915.12	gi|289596553|ref|YP_003483249.1|	-	1.7e-23	83.4	14.7	2.6e-22	79.5	10.2	2.0	1	1	0	1	1	1	1	Rubrerythrin
Cys_rich_CPCC	PF14206.1	gi|289596553|ref|YP_003483249.1|	-	0.0015	18.0	2.1	0.0037	16.7	1.5	1.7	1	0	0	1	1	1	1	Cysteine-rich	CPCC
Rubredoxin	PF00301.15	gi|289596553|ref|YP_003483249.1|	-	0.0031	17.3	8.4	0.1	12.5	5.8	2.4	1	1	0	1	1	1	1	Rubredoxin
A2L_zn_ribbon	PF08792.5	gi|289596553|ref|YP_003483249.1|	-	0.01	15.2	1.1	0.068	12.6	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
HypA	PF01155.14	gi|289596553|ref|YP_003483249.1|	-	0.025	14.2	0.2	0.055	13.1	0.1	1.6	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|289596553|ref|YP_003483249.1|	-	0.025	14.0	2.6	0.055	12.9	1.8	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|289596553|ref|YP_003483249.1|	-	0.069	12.4	2.1	6.3	6.2	0.1	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-FPG_IleRS	PF06827.9	gi|289596553|ref|YP_003483249.1|	-	0.078	12.6	1.0	2.1	8.1	0.1	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
DZR	PF12773.2	gi|289596553|ref|YP_003483249.1|	-	0.096	12.5	1.0	0.21	11.4	0.7	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF3039	PF11238.3	gi|289596553|ref|YP_003483249.1|	-	0.14	11.6	3.8	0.19	11.2	0.4	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3039)
DUF1610	PF07754.6	gi|289596553|ref|YP_003483249.1|	-	0.15	12.1	6.1	0.84	9.8	0.2	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Zn-ribbon_8	PF09723.5	gi|289596553|ref|YP_003483249.1|	-	0.19	11.7	4.1	0.82	9.6	2.9	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289596553|ref|YP_003483249.1|	-	0.21	11.4	1.6	1.4	8.7	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-H2C2_2	PF13465.1	gi|289596553|ref|YP_003483249.1|	-	0.31	11.3	2.5	3.3	8.1	0.1	2.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
Ferritin	PF00210.19	gi|289596553|ref|YP_003483249.1|	-	0.57	9.9	8.5	1.2	8.8	5.9	1.6	1	1	0	1	1	1	0	Ferritin-like	domain
zf-ISL3	PF14690.1	gi|289596553|ref|YP_003483249.1|	-	0.79	9.8	3.3	7.8	6.6	0.2	2.6	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|289596553|ref|YP_003483249.1|	-	0.9	8.8	6.8	24	4.3	4.8	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-C2H2_4	PF13894.1	gi|289596553|ref|YP_003483249.1|	-	1.3	9.4	3.3	13	6.3	0.2	2.5	2	0	0	2	2	2	0	C2H2-type	zinc	finger
UPF0547	PF10571.4	gi|289596553|ref|YP_003483249.1|	-	2.1	8.0	5.9	3.7	7.3	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
TerY-C	PF15616.1	gi|289596553|ref|YP_003483249.1|	-	2.5	8.0	6.1	23	4.9	3.7	2.4	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
DNA_ligase_ZBD	PF03119.11	gi|289596553|ref|YP_003483249.1|	-	3.3	7.4	8.8	5.7	6.7	1.3	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Rad50_zn_hook	PF04423.9	gi|289596553|ref|YP_003483249.1|	-	3.7	7.0	8.7	2.1	7.9	0.6	2.7	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
Ferritin	PF00210.19	gi|289596554|ref|YP_003483250.1|	-	1.7e-42	144.5	5.9	2e-42	144.3	4.1	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
DUF1769	PF08588.5	gi|289596554|ref|YP_003483250.1|	-	0.078	12.9	0.0	14	5.7	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1769)
Desulfoferrodox	PF01880.13	gi|289596555|ref|YP_003483251.1|	-	8.7e-31	106.0	0.2	1e-30	105.8	0.2	1.0	1	0	0	1	1	1	1	Desulfoferrodoxin
DUF308	PF03729.8	gi|289596556|ref|YP_003483252.1|	-	3.3e-18	65.4	63.8	1.1e-10	41.3	14.8	3.0	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
B12D	PF06522.6	gi|289596556|ref|YP_003483252.1|	-	0.81	9.4	2.6	1.4	8.6	1.8	1.3	1	0	0	1	1	1	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
OsmC	PF02566.14	gi|289596557|ref|YP_003483253.1|	-	5.4e-16	58.6	0.0	9.2e-16	57.8	0.0	1.3	1	0	0	1	1	1	1	OsmC-like	protein
AhpC-TSA	PF00578.16	gi|289596558|ref|YP_003483254.1|	-	1.4e-34	118.4	0.0	1.9e-34	118.0	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|289596558|ref|YP_003483254.1|	-	1.1e-15	57.4	0.0	1.3e-15	57.1	0.0	1.1	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|289596558|ref|YP_003483254.1|	-	2.1e-08	33.7	0.1	4.2e-08	32.7	0.1	1.6	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
Thioredoxin_8	PF13905.1	gi|289596558|ref|YP_003483254.1|	-	0.0025	17.9	0.0	0.0041	17.1	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Rubrerythrin	PF02915.12	gi|289596559|ref|YP_003483255.1|	-	2.7e-07	30.9	2.7	2.7e-07	30.9	1.9	1.3	2	0	0	2	2	2	1	Rubrerythrin
DUF2383	PF09537.5	gi|289596559|ref|YP_003483255.1|	-	0.0022	18.2	0.1	0.0041	17.3	0.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF2383)
Ferritin	PF00210.19	gi|289596559|ref|YP_003483255.1|	-	0.0031	17.2	1.0	0.0036	17.0	0.4	1.4	1	1	0	1	1	1	1	Ferritin-like	domain
COQ7	PF03232.8	gi|289596559|ref|YP_003483255.1|	-	0.019	14.4	0.0	0.026	14.0	0.0	1.2	1	0	0	1	1	1	0	Ubiquinone	biosynthesis	protein	COQ7
DUF2202	PF09968.4	gi|289596559|ref|YP_003483255.1|	-	0.022	14.4	0.3	0.051	13.2	0.2	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	domain	(DUF2202)
DUF3231	PF11553.3	gi|289596559|ref|YP_003483255.1|	-	0.095	12.1	0.1	0.12	11.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3231)
GDPD	PF03009.12	gi|289596560|ref|YP_003483256.1|	-	7.8e-32	110.7	0.0	2.6e-31	109.0	0.0	1.7	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
QRPTase_C	PF01729.14	gi|289596560|ref|YP_003483256.1|	-	0.046	13.2	0.2	5.9	6.3	0.0	2.2	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PI-PLC-X	PF00388.14	gi|289596560|ref|YP_003483256.1|	-	0.064	12.6	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
DUF308	PF03729.8	gi|289596561|ref|YP_003483257.1|	-	2.3e-08	33.8	48.6	1e-06	28.6	10.2	3.1	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
PEPCK	PF00821.13	gi|289596562|ref|YP_003483258.1|	-	7.1e-184	612.2	0.0	8.4e-184	611.9	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
PEPCK_ATP	PF01293.15	gi|289596562|ref|YP_003483258.1|	-	4.9e-05	22.0	0.0	7e-05	21.5	0.0	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
Nitro_FeMo-Co	PF02579.12	gi|289596563|ref|YP_003483259.1|	-	3.4e-08	33.4	0.1	7e-08	32.4	0.0	1.5	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
DUF2284	PF10050.4	gi|289596564|ref|YP_003483260.1|	-	5.3e-37	126.9	0.5	6.2e-37	126.7	0.3	1.0	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2284)
Fer4_8	PF13183.1	gi|289596564|ref|YP_003483260.1|	-	0.041	13.9	2.7	1.5	8.8	3.0	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
DUF998	PF06197.8	gi|289596565|ref|YP_003483261.1|	-	3.5e-26	91.6	21.3	4e-26	91.4	14.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
SAYSvFN	PF10260.4	gi|289596565|ref|YP_003483261.1|	-	4.3	7.1	8.4	0.85	9.4	3.0	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	domain	(SAYSvFN)
DUF1610	PF07754.6	gi|289596566|ref|YP_003483262.1|	-	2.4e-12	46.6	18.3	5.4e-06	26.4	4.7	2.6	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|289596566|ref|YP_003483262.1|	-	1.1e-05	25.1	10.3	0.00024	20.8	0.4	2.2	1	1	1	2	2	2	2	Double	zinc	ribbon
C1_3	PF07649.7	gi|289596566|ref|YP_003483262.1|	-	6.6e-05	22.8	9.7	0.0088	16.0	1.3	2.1	2	0	0	2	2	2	2	C1-like	domain
zf-ribbon_3	PF13248.1	gi|289596566|ref|YP_003483262.1|	-	0.00016	20.7	18.8	0.28	10.4	1.5	3.7	2	1	2	4	4	4	3	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596566|ref|YP_003483262.1|	-	0.00016	21.0	3.7	0.00016	21.0	2.6	3.2	3	1	0	3	3	3	2	zinc-ribbon	domain
DUF1272	PF06906.6	gi|289596566|ref|YP_003483262.1|	-	0.0035	17.1	11.4	4.9	7.0	7.8	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
Prok-RING_1	PF14446.1	gi|289596566|ref|YP_003483262.1|	-	0.0046	16.6	0.6	0.0046	16.6	0.4	2.7	1	1	1	2	2	2	1	Prokaryotic	RING	finger	family	1
C1_1	PF00130.17	gi|289596566|ref|YP_003483262.1|	-	0.0057	16.3	8.6	0.034	13.8	0.4	2.2	1	1	1	2	2	2	2	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
UPF0547	PF10571.4	gi|289596566|ref|YP_003483262.1|	-	0.0061	16.2	16.2	0.33	10.7	2.9	3.7	3	1	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
PolC_DP2	PF03833.8	gi|289596566|ref|YP_003483262.1|	-	0.01	13.5	5.4	0.011	13.4	3.7	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
OrfB_Zn_ribbon	PF07282.6	gi|289596566|ref|YP_003483262.1|	-	0.021	14.4	10.7	0.071	12.7	0.7	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS91	PF14319.1	gi|289596566|ref|YP_003483262.1|	-	0.024	14.1	6.9	0.031	13.7	4.8	1.2	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
tRNA-synt_1g	PF09334.6	gi|289596566|ref|YP_003483262.1|	-	0.06	12.0	0.7	0.06	12.0	0.5	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
DUF164	PF02591.10	gi|289596566|ref|YP_003483262.1|	-	0.077	12.8	13.7	0.44	10.4	0.1	3.3	1	1	2	3	3	3	0	Putative	zinc	ribbon	domain
zf-UBR	PF02207.15	gi|289596566|ref|YP_003483262.1|	-	0.14	11.8	6.6	0.92	9.2	3.4	2.3	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zf-AN1	PF01428.11	gi|289596566|ref|YP_003483262.1|	-	0.16	11.8	11.3	0.87	9.5	1.5	2.7	2	1	1	3	3	3	0	AN1-like	Zinc	finger
zf-Mss51	PF13824.1	gi|289596566|ref|YP_003483262.1|	-	0.2	11.5	12.0	0.89	9.4	1.9	2.3	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Sgf11	PF08209.6	gi|289596566|ref|YP_003483262.1|	-	0.2	11.0	14.8	0.23	10.7	1.1	3.5	2	1	1	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
DUF2296	PF10058.4	gi|289596566|ref|YP_003483262.1|	-	0.25	11.1	12.4	1.3	8.8	1.0	3.1	2	2	1	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-ISL3	PF14690.1	gi|289596566|ref|YP_003483262.1|	-	0.3	11.1	15.3	0.86	9.6	2.7	3.4	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-RING_5	PF14634.1	gi|289596566|ref|YP_003483262.1|	-	0.42	10.3	11.2	2.2	8.0	7.8	2.1	1	1	0	1	1	1	0	zinc-RING	finger	domain
TFIIS_C	PF01096.13	gi|289596566|ref|YP_003483262.1|	-	0.66	9.6	15.0	3.8	7.2	0.3	4.0	1	1	3	4	4	4	0	Transcription	factor	S-II	(TFIIS)
zf-B_box	PF00643.19	gi|289596566|ref|YP_003483262.1|	-	0.89	9.4	12.4	21	5.1	5.0	2.9	1	1	2	3	3	3	0	B-box	zinc	finger
IBR	PF01485.16	gi|289596566|ref|YP_003483262.1|	-	0.97	9.3	12.1	1.4	8.8	4.0	2.3	1	1	1	2	2	2	0	IBR	domain
Nudix_N_2	PF14803.1	gi|289596566|ref|YP_003483262.1|	-	1.1	9.0	15.2	2.5	7.8	0.1	3.7	2	1	0	2	2	2	0	Nudix	N-terminal
zinc-ribbons_6	PF07191.7	gi|289596566|ref|YP_003483262.1|	-	1.1	9.1	9.4	14	5.6	6.5	2.1	1	1	0	1	1	1	0	zinc-ribbons
zf-LITAF-like	PF10601.4	gi|289596566|ref|YP_003483262.1|	-	1.2	9.0	12.5	0.23	11.3	0.5	3.0	1	1	1	3	3	3	0	LITAF-like	zinc	ribbon	domain
HypA	PF01155.14	gi|289596566|ref|YP_003483262.1|	-	1.3	8.7	10.2	2.3	7.9	3.7	2.2	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-H2C2_2	PF13465.1	gi|289596566|ref|YP_003483262.1|	-	1.5	9.2	12.6	7	7.1	2.8	3.1	3	1	0	3	3	3	0	Zinc-finger	double	domain
DUF2072	PF09845.4	gi|289596566|ref|YP_003483262.1|	-	1.8	8.5	10.8	0.5	10.3	2.3	2.1	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
TF_Zn_Ribbon	PF08271.7	gi|289596566|ref|YP_003483262.1|	-	1.9	7.8	20.7	1.3	8.3	0.7	3.5	3	1	0	3	3	3	0	TFIIB	zinc-binding
zf-HIT	PF04438.11	gi|289596566|ref|YP_003483262.1|	-	2	8.1	18.4	3.1	7.5	5.0	3.2	2	2	0	2	2	2	0	HIT	zinc	finger
Dynactin_p62	PF05502.8	gi|289596566|ref|YP_003483262.1|	-	2	7.0	7.2	1.4	7.6	4.3	1.3	1	1	0	1	1	1	0	Dynactin	p62	family
zf-FPG_IleRS	PF06827.9	gi|289596566|ref|YP_003483262.1|	-	2.5	7.8	11.5	21	4.8	0.2	3.9	3	1	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Auto_anti-p27	PF06677.7	gi|289596566|ref|YP_003483262.1|	-	5.7	6.7	11.6	12	5.7	1.6	3.3	3	1	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
ADK_lid	PF05191.9	gi|289596566|ref|YP_003483262.1|	-	5.8	6.6	11.2	19	5.0	0.1	3.7	4	0	0	4	4	4	0	Adenylate	kinase,	active	site	lid
FYVE	PF01363.16	gi|289596566|ref|YP_003483262.1|	-	6.6	6.7	11.2	18	5.3	7.8	1.8	1	1	0	1	1	1	0	FYVE	zinc	finger
PhnA_Zn_Ribbon	PF08274.7	gi|289596566|ref|YP_003483262.1|	-	8	6.3	11.5	3.9	7.3	0.1	3.0	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
Rubredoxin	PF00301.15	gi|289596566|ref|YP_003483262.1|	-	9	6.2	14.3	7.3	6.5	1.5	3.4	1	1	2	3	3	3	0	Rubredoxin
Zn-ribbon_8	PF09723.5	gi|289596566|ref|YP_003483262.1|	-	9.1	6.3	17.4	8.4	6.4	0.5	3.6	1	1	1	3	3	3	0	Zinc	ribbon	domain
EF1_GNE	PF00736.14	gi|289596567|ref|YP_003483263.1|	-	1.9e-20	72.3	5.4	2e-20	72.2	3.8	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
DUF211	PF02680.9	gi|289596567|ref|YP_003483263.1|	-	0.041	13.6	0.7	1.9	8.3	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	ArCR,	COG1888
Spore_YhcN_YlaJ	PF09580.5	gi|289596567|ref|YP_003483263.1|	-	0.48	10.5	1.8	13	5.8	0.1	2.0	2	0	0	2	2	2	0	Sporulation	lipoprotein	YhcN/YlaJ	(Spore_YhcN_YlaJ)
P2	PF07194.6	gi|289596567|ref|YP_003483263.1|	-	0.99	9.3	4.0	17	5.3	0.8	2.2	2	0	0	2	2	2	0	P2	response	regulator	binding	domain
PQQ_3	PF13570.1	gi|289596568|ref|YP_003483264.1|	-	1.2e-34	117.6	20.4	9.9e-07	28.8	0.0	8.6	8	0	0	8	8	8	7	PQQ-like	domain
PQQ_2	PF13360.1	gi|289596568|ref|YP_003483264.1|	-	1.3e-31	109.8	3.2	3e-14	53.0	0.0	3.5	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|289596568|ref|YP_003483264.1|	-	3.2e-07	29.5	15.6	0.22	11.1	0.1	8.7	9	0	0	9	9	9	3	PQQ	enzyme	repeat
DUF4430	PF14478.1	gi|289596568|ref|YP_003483264.1|	-	2.1e-05	24.5	4.4	2.1e-05	24.5	3.1	3.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4430)
DUF4394	PF14339.1	gi|289596568|ref|YP_003483264.1|	-	0.082	12.1	2.0	1	8.5	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4394)
NTPase_I-T	PF01931.13	gi|289596569|ref|YP_003483265.1|	-	8.1e-52	175.3	0.0	1.2e-51	174.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
CTP_transf_2	PF01467.21	gi|289596569|ref|YP_003483265.1|	-	1.8e-12	47.5	0.0	3.4e-12	46.6	0.0	1.5	1	0	0	1	1	1	1	Cytidylyltransferase
Pantoate_ligase	PF02569.10	gi|289596569|ref|YP_003483265.1|	-	0.0097	14.6	0.0	0.047	12.4	0.0	2.0	2	0	0	2	2	2	1	Pantoate-beta-alanine	ligase
Glyco_transf_11	PF01531.11	gi|289596569|ref|YP_003483265.1|	-	0.051	12.5	0.0	0.077	11.9	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	11
FAD_syn	PF06574.7	gi|289596569|ref|YP_003483265.1|	-	0.12	11.9	0.1	0.2	11.2	0.1	1.5	1	1	0	1	1	1	0	FAD	synthetase
DUF2116	PF09889.4	gi|289596570|ref|YP_003483266.1|	-	1.2e-18	66.5	0.3	1.6e-18	66.2	0.2	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zf-ribbon_3	PF13248.1	gi|289596570|ref|YP_003483266.1|	-	0.017	14.3	1.0	0.025	13.7	0.7	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.2	gi|289596570|ref|YP_003483266.1|	-	0.022	14.5	0.4	0.029	14.1	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
RPAP2_Rtr1	PF04181.8	gi|289596570|ref|YP_003483266.1|	-	0.1	12.7	0.2	0.12	12.4	0.1	1.2	1	0	0	1	1	1	0	Rtr1/RPAP2	family
DUF4200	PF13863.1	gi|289596570|ref|YP_003483266.1|	-	0.1	12.5	0.5	0.17	11.8	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
PriCT_2	PF08707.6	gi|289596570|ref|YP_003483266.1|	-	0.14	11.9	0.1	0.23	11.3	0.1	1.3	1	0	0	1	1	1	0	Primase	C	terminal	2	(PriCT-2)
Takusan	PF04822.8	gi|289596570|ref|YP_003483266.1|	-	0.22	11.2	1.1	0.41	10.4	0.8	1.5	1	0	0	1	1	1	0	Takusan
NosD	PF05048.8	gi|289596571|ref|YP_003483267.1|	-	6.9e-35	120.3	80.5	6.1e-24	84.4	33.1	4.3	2	1	1	3	3	3	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289596571|ref|YP_003483267.1|	-	4.9e-25	88.1	75.7	1.1e-12	48.0	8.6	5.1	3	2	1	4	4	4	3	Right	handed	beta	helix	region
fn3	PF00041.16	gi|289596571|ref|YP_003483267.1|	-	2.1e-18	66.1	9.5	1.6e-06	28.1	0.1	4.4	3	2	0	3	3	3	3	Fibronectin	type	III	domain
Pectate_lyase_3	PF12708.2	gi|289596571|ref|YP_003483267.1|	-	5.3e-05	23.4	29.0	0.0014	18.8	4.5	3.6	1	1	2	3	3	3	2	Pectate	lyase	superfamily	protein
Adeno_E1B_55K	PF01696.12	gi|289596571|ref|YP_003483267.1|	-	0.015	13.8	2.9	0.028	12.9	0.4	2.0	1	1	1	2	2	2	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
ABC_tran	PF00005.22	gi|289596572|ref|YP_003483268.1|	-	4.7e-26	91.7	0.0	6.6e-26	91.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596572|ref|YP_003483268.1|	-	4.5e-11	43.2	0.2	2.9e-05	24.1	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|289596572|ref|YP_003483268.1|	-	9.7e-09	34.7	0.5	0.00037	19.7	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|289596572|ref|YP_003483268.1|	-	5.6e-05	23.5	0.0	9.9e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|289596572|ref|YP_003483268.1|	-	0.00015	21.2	0.0	0.00028	20.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|289596572|ref|YP_003483268.1|	-	0.0021	17.5	0.0	0.49	9.7	0.0	2.3	2	0	0	2	2	2	1	AAA-like	domain
NACHT	PF05729.7	gi|289596572|ref|YP_003483268.1|	-	0.0032	17.1	0.4	0.022	14.4	0.1	2.1	2	1	0	2	2	2	1	NACHT	domain
T2SE	PF00437.15	gi|289596572|ref|YP_003483268.1|	-	0.0075	15.1	0.1	0.016	14.0	0.0	1.6	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|289596572|ref|YP_003483268.1|	-	0.015	15.4	0.5	0.079	13.1	0.4	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|289596572|ref|YP_003483268.1|	-	0.023	14.5	0.2	0.096	12.5	0.1	2.0	1	1	0	2	2	2	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|289596572|ref|YP_003483268.1|	-	0.033	13.5	0.0	0.063	12.6	0.0	1.5	1	0	0	1	1	1	0	Thymidylate	kinase
FtsK_SpoIIIE	PF01580.13	gi|289596572|ref|YP_003483268.1|	-	0.036	13.5	0.0	0.067	12.6	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_19	PF13245.1	gi|289596572|ref|YP_003483268.1|	-	0.038	13.7	0.0	0.11	12.3	0.0	1.7	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|289596572|ref|YP_003483268.1|	-	0.038	14.7	0.1	0.054	14.3	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|289596572|ref|YP_003483268.1|	-	0.041	13.8	0.0	0.06	13.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|289596572|ref|YP_003483268.1|	-	0.046	12.8	0.0	0.082	12.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_13	PF13166.1	gi|289596572|ref|YP_003483268.1|	-	0.057	11.8	0.0	0.1	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|289596572|ref|YP_003483268.1|	-	0.069	10.4	0.1	0.095	10.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_22	PF13401.1	gi|289596572|ref|YP_003483268.1|	-	0.074	13.1	0.2	0.21	11.7	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|289596572|ref|YP_003483268.1|	-	0.088	12.4	0.1	0.26	10.9	0.0	1.8	2	0	0	2	2	2	0	Archaeal	ATPase
MobB	PF03205.9	gi|289596572|ref|YP_003483268.1|	-	0.095	12.3	0.1	0.97	9.1	0.0	2.3	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|289596572|ref|YP_003483268.1|	-	0.11	11.0	0.2	0.91	8.0	0.0	2.0	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
SRP54	PF00448.17	gi|289596572|ref|YP_003483268.1|	-	0.13	11.7	0.1	0.33	10.3	0.0	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
UPF0051	PF01458.12	gi|289596573|ref|YP_003483269.1|	-	5.1e-42	143.8	0.5	6.7e-42	143.5	0.4	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
zf-BED	PF02892.10	gi|289596574|ref|YP_003483270.1|	-	0.055	13.2	1.6	0.1	12.3	1.1	1.4	1	0	0	1	1	1	0	BED	zinc	finger
DUF3093	PF11292.3	gi|289596574|ref|YP_003483270.1|	-	0.09	12.5	0.1	0.16	11.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3093)
Fer4_13	PF13370.1	gi|289596575|ref|YP_003483271.1|	-	2.9e-22	78.8	5.0	3.2e-22	78.6	3.5	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|289596575|ref|YP_003483271.1|	-	5.3e-22	78.1	7.4	5.9e-22	78.0	5.1	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_19	PF06902.6	gi|289596575|ref|YP_003483271.1|	-	6.9e-06	25.7	1.9	9.2e-06	25.3	1.3	1.2	1	0	0	1	1	1	1	Divergent	4Fe-4S	mono-cluster
Fer4_9	PF13187.1	gi|289596575|ref|YP_003483271.1|	-	2.8e-05	24.2	2.9	3.6e-05	23.9	2.0	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596575|ref|YP_003483271.1|	-	5.1e-05	22.6	1.4	5.1e-05	22.6	1.0	2.5	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289596575|ref|YP_003483271.1|	-	0.00063	19.5	0.9	0.00063	19.5	0.6	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596575|ref|YP_003483271.1|	-	0.00078	19.7	9.3	0.03	14.6	2.7	2.3	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596575|ref|YP_003483271.1|	-	0.00086	19.0	0.9	0.00086	19.0	0.7	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289596575|ref|YP_003483271.1|	-	0.0013	18.5	3.6	0.0023	17.7	2.5	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596575|ref|YP_003483271.1|	-	0.0049	16.6	8.2	0.1	12.4	6.0	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596575|ref|YP_003483271.1|	-	2.7	8.5	6.8	0.93	10.0	0.2	2.5	2	1	0	2	2	2	0	4Fe-4S	binding	domain
DUF4131	PF13567.1	gi|289596576|ref|YP_003483272.1|	-	0.026	13.9	0.0	0.038	13.3	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
FtsX	PF02687.16	gi|289596576|ref|YP_003483272.1|	-	0.39	10.4	6.2	2.2	8.0	4.3	2.1	1	1	0	1	1	1	0	FtsX-like	permease	family
tRNA_anti-like	PF12869.2	gi|289596576|ref|YP_003483272.1|	-	0.62	9.5	4.2	1.2	8.6	0.4	2.2	1	1	1	2	2	2	0	tRNA_anti-like
Foamy_virus_ENV	PF03408.9	gi|289596577|ref|YP_003483273.1|	-	0.22	9.0	4.3	0.24	8.9	3.0	1.0	1	0	0	1	1	1	0	Foamy	virus	envelope	protein
CHORD	PF04968.7	gi|289596577|ref|YP_003483273.1|	-	1.3	9.2	8.0	0.082	13.1	1.7	1.8	1	1	1	2	2	2	0	CHORD
adh_short	PF00106.20	gi|289596578|ref|YP_003483274.1|	-	2.1e-37	128.6	0.0	2.5e-37	128.3	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|289596578|ref|YP_003483274.1|	-	4.8e-15	55.6	0.0	6.3e-15	55.3	0.0	1.1	1	0	0	1	1	1	1	KR	domain
adh_short_C2	PF13561.1	gi|289596578|ref|YP_003483274.1|	-	2.9e-14	53.4	0.1	3.7e-14	53.0	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.16	gi|289596578|ref|YP_003483274.1|	-	0.0017	17.8	1.0	0.0074	15.7	0.6	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Eno-Rase_NADH_b	PF12242.3	gi|289596578|ref|YP_003483274.1|	-	0.0033	17.1	1.0	0.0091	15.7	0.2	2.0	1	1	1	2	2	2	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
3Beta_HSD	PF01073.14	gi|289596578|ref|YP_003483274.1|	-	0.006	15.3	0.2	0.0072	15.0	0.2	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
HisG_C	PF08029.6	gi|289596578|ref|YP_003483274.1|	-	0.013	15.3	0.7	0.13	12.1	0.1	2.4	2	0	0	2	2	2	0	HisG,	C-terminal	domain
HEM4	PF02602.10	gi|289596578|ref|YP_003483274.1|	-	0.018	14.3	0.0	0.025	13.8	0.0	1.1	1	0	0	1	1	1	0	Uroporphyrinogen-III	synthase	HemD
Mur_ligase_C	PF02875.16	gi|289596578|ref|YP_003483274.1|	-	0.023	14.7	0.1	0.053	13.5	0.1	1.5	1	0	0	1	1	1	0	Mur	ligase	family,	glutamate	ligase	domain
Nol1_Nop2_Fmu	PF01189.12	gi|289596578|ref|YP_003483274.1|	-	0.071	12.4	0.0	0.099	11.9	0.0	1.1	1	0	0	1	1	1	0	NOL1/NOP2/sun	family
Amidohydro_4	PF13147.1	gi|289596579|ref|YP_003483275.1|	-	7.7e-27	95.0	0.0	9.7e-27	94.6	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|289596579|ref|YP_003483275.1|	-	2.1e-12	47.3	0.0	1.2e-08	35.0	0.0	2.5	2	1	0	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|289596579|ref|YP_003483275.1|	-	1.2e-08	34.6	0.1	2.7e-08	33.5	0.1	1.6	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|289596579|ref|YP_003483275.1|	-	1.5e-06	27.7	0.0	0.012	14.8	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
DUF885	PF05960.6	gi|289596579|ref|YP_003483275.1|	-	0.14	11.2	0.0	0.23	10.5	0.0	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
NUDIX	PF00293.23	gi|289596580|ref|YP_003483276.1|	-	1.2e-19	70.3	0.0	1.4e-19	70.0	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
CMV_1a_C	PF12503.3	gi|289596580|ref|YP_003483276.1|	-	0.032	13.9	0.1	8	6.2	0.0	2.2	2	0	0	2	2	2	0	Cucumber	mosaic	virus	1a	protein	C	terminal
NUDIX_4	PF14815.1	gi|289596580|ref|YP_003483276.1|	-	0.057	12.8	0.1	0.091	12.1	0.0	1.3	1	1	0	1	1	1	0	NUDIX	domain
Peptidase_C2	PF00648.16	gi|289596580|ref|YP_003483276.1|	-	0.097	11.6	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	Calpain	family	cysteine	protease
Lactamase_B	PF00753.22	gi|289596581|ref|YP_003483277.1|	-	1.6e-09	37.7	1.6	2.3e-09	37.2	1.1	1.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|289596581|ref|YP_003483277.1|	-	3.2e-07	30.0	0.0	4e-07	29.7	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
HHH_3	PF12836.2	gi|289596582|ref|YP_003483278.1|	-	2.3e-10	40.2	0.1	4.1e-10	39.4	0.1	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|289596582|ref|YP_003483278.1|	-	0.00034	20.1	0.1	0.11	12.2	0.0	2.4	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|289596582|ref|YP_003483278.1|	-	0.0084	16.2	0.2	0.09	12.9	0.1	2.3	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
PsbU	PF06514.6	gi|289596582|ref|YP_003483278.1|	-	0.11	12.3	0.0	0.26	11.1	0.0	1.6	1	0	0	1	1	1	0	Photosystem	II	12	kDa	extrinsic	protein	(PsbU)
PTS_2-RNA	PF01885.11	gi|289596583|ref|YP_003483279.1|	-	1.2e-42	145.2	0.0	1.7e-42	144.8	0.0	1.1	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
RE_SinI	PF09570.5	gi|289596583|ref|YP_003483279.1|	-	0.032	13.2	0.2	0.052	12.5	0.2	1.3	1	0	0	1	1	1	0	SinI	restriction	endonuclease
DUF59	PF01883.14	gi|289596584|ref|YP_003483280.1|	-	2.7e-19	68.9	0.1	3.3e-19	68.6	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
7TMR-DISM_7TM	PF07695.6	gi|289596585|ref|YP_003483281.1|	-	0.72	9.4	45.9	1.4	8.5	31.8	1.5	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
DUF754	PF05449.6	gi|289596585|ref|YP_003483281.1|	-	3.5	7.7	7.6	0.43	10.6	0.9	2.5	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF754)
GATase_5	PF13507.1	gi|289596586|ref|YP_003483282.1|	-	2.4e-71	239.6	0.0	2.8e-71	239.4	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|289596586|ref|YP_003483282.1|	-	4.6e-07	29.3	0.0	8.6e-07	28.5	0.0	1.5	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.9	gi|289596586|ref|YP_003483282.1|	-	1.8e-05	24.4	0.0	4.3e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|289596586|ref|YP_003483282.1|	-	8.4e-05	22.0	0.0	0.00012	21.5	0.0	1.6	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF4066	PF13278.1	gi|289596586|ref|YP_003483282.1|	-	0.00015	21.1	0.0	0.00025	20.3	0.0	1.3	1	0	0	1	1	1	1	Putative	amidotransferase
SNO	PF01174.14	gi|289596586|ref|YP_003483282.1|	-	0.041	13.5	0.0	0.18	11.4	0.0	1.9	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
AIRS_C	PF02769.17	gi|289596587|ref|YP_003483283.1|	-	8.9e-47	158.9	4.4	5.6e-26	91.3	0.4	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|289596587|ref|YP_003483283.1|	-	6.8e-37	125.6	0.1	4.6e-22	78.0	0.0	2.7	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
PurS	PF02700.9	gi|289596588|ref|YP_003483284.1|	-	2.5e-25	88.2	0.7	2.8e-25	88.0	0.5	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Peptidase_M26_C	PF07580.9	gi|289596588|ref|YP_003483284.1|	-	0.062	11.5	0.1	0.062	11.5	0.0	1.0	1	0	0	1	1	1	0	M26	IgA1-specific	Metallo-endopeptidase	C-terminal	region
4HB_MCP_1	PF12729.2	gi|289596589|ref|YP_003483285.1|	-	0.0089	15.4	0.1	0.011	15.1	0.1	1.0	1	0	0	1	1	1	1	Four	helix	bundle	sensory	module	for	signal	transduction
EMG1	PF03587.9	gi|289596590|ref|YP_003483286.1|	-	1e-50	171.8	0.0	1.1e-50	171.7	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Ribonuc_red_lgC	PF02867.10	gi|289596591|ref|YP_003483287.1|	-	1.9e-166	554.8	0.0	2.1e-120	402.8	0.0	2.5	1	1	1	2	2	2	2	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|289596591|ref|YP_003483287.1|	-	1.7e-27	95.0	0.6	4.8e-27	93.5	0.1	2.1	2	0	0	2	2	2	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|289596591|ref|YP_003483287.1|	-	3.5e-18	65.8	5.4	3.5e-18	65.8	3.7	3.1	3	0	0	3	3	3	1	ATP	cone	domain
NRDD	PF13597.1	gi|289596591|ref|YP_003483287.1|	-	0.002	16.2	0.0	0.0033	15.5	0.0	1.2	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
Stork_head	PF10264.4	gi|289596591|ref|YP_003483287.1|	-	0.074	13.2	0.1	0.16	12.1	0.1	1.5	1	0	0	1	1	1	0	Winged	helix	Storkhead-box1	domain
SRP54	PF00448.17	gi|289596592|ref|YP_003483288.1|	-	1.4e-72	243.2	0.3	2.4e-72	242.5	0.2	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|289596592|ref|YP_003483288.1|	-	9.9e-29	99.6	2.6	9.9e-29	99.6	1.8	2.4	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|289596592|ref|YP_003483288.1|	-	5.4e-14	52.0	7.5	7.7e-14	51.5	0.4	3.9	4	1	1	5	5	4	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|289596592|ref|YP_003483288.1|	-	1.9e-05	24.1	0.6	1.9e-05	24.1	0.4	2.5	1	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|289596592|ref|YP_003483288.1|	-	0.0018	18.4	0.1	0.012	15.7	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|289596592|ref|YP_003483288.1|	-	0.0053	15.5	0.2	0.017	13.9	0.0	1.9	2	0	0	2	2	2	1	ArgK	protein
MobB	PF03205.9	gi|289596592|ref|YP_003483288.1|	-	0.0056	16.3	0.0	0.016	14.9	0.0	1.8	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|289596592|ref|YP_003483288.1|	-	0.0085	16.0	0.1	0.026	14.4	0.0	2.0	2	1	0	2	2	2	1	AAA	ATPase	domain
Glyco_transf_4	PF13439.1	gi|289596592|ref|YP_003483288.1|	-	0.0098	15.6	0.2	0.44	10.2	0.0	2.5	3	0	0	3	3	3	1	Glycosyltransferase	Family	4
6PF2K	PF01591.13	gi|289596592|ref|YP_003483288.1|	-	0.013	14.5	0.0	0.028	13.4	0.0	1.6	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AAA	PF00004.24	gi|289596592|ref|YP_003483288.1|	-	0.014	15.6	1.3	0.63	10.2	0.1	3.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRPRB	PF09439.5	gi|289596592|ref|YP_003483288.1|	-	0.017	14.3	0.2	0.28	10.3	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
APS_kinase	PF01583.15	gi|289596592|ref|YP_003483288.1|	-	0.023	14.3	0.0	0.065	12.9	0.0	1.8	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|289596592|ref|YP_003483288.1|	-	0.027	14.2	0.0	0.073	12.8	0.0	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
cobW	PF02492.14	gi|289596592|ref|YP_003483288.1|	-	0.027	13.9	0.2	0.064	12.6	0.2	1.7	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
ATP_bind_1	PF03029.12	gi|289596592|ref|YP_003483288.1|	-	0.041	13.4	0.2	1.3	8.5	0.0	2.5	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_30	PF13604.1	gi|289596592|ref|YP_003483288.1|	-	0.054	13.0	0.1	0.51	9.8	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Spectrin	PF00435.16	gi|289596592|ref|YP_003483288.1|	-	0.068	13.4	1.5	0.37	11.0	0.0	2.7	3	0	0	3	3	2	0	Spectrin	repeat
AAA_17	PF13207.1	gi|289596592|ref|YP_003483288.1|	-	0.15	12.8	2.8	0.7	10.7	0.4	2.9	2	2	0	2	2	2	0	AAA	domain
Cytidylate_kin2	PF13189.1	gi|289596592|ref|YP_003483288.1|	-	0.39	10.6	3.8	5.8	6.7	0.1	2.9	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
Occludin_ELL	PF07303.8	gi|289596592|ref|YP_003483288.1|	-	1.8	9.3	6.6	0.49	11.1	1.9	2.1	2	0	0	2	2	1	0	Occludin	homology	domain
Methyltrn_RNA_2	PF04013.7	gi|289596593|ref|YP_003483289.1|	-	6.6e-53	179.2	0.0	7.5e-53	179.0	0.0	1.0	1	0	0	1	1	1	1	Putative	SAM-dependent	RNA	methyltransferase
Radical_SAM	PF04055.16	gi|289596594|ref|YP_003483290.1|	-	4.3e-07	30.2	0.1	2.7e-06	27.6	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
BPD_transp_1	PF00528.17	gi|289596595|ref|YP_003483291.1|	-	2.5e-12	46.7	12.5	2.5e-12	46.7	8.6	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|289596596|ref|YP_003483292.1|	-	4.5e-14	52.3	13.2	4.5e-14	52.3	9.1	2.9	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
EF-hand_1	PF00036.27	gi|289596596|ref|YP_003483292.1|	-	3.2e-05	22.9	0.2	7.6e-05	21.7	0.1	1.6	1	0	0	1	1	1	1	EF	hand
EF-hand_6	PF13405.1	gi|289596596|ref|YP_003483292.1|	-	0.00085	19.0	0.2	0.0023	17.6	0.2	1.7	1	0	0	1	1	1	1	EF-hand	domain
EF-hand_7	PF13499.1	gi|289596596|ref|YP_003483292.1|	-	0.0045	17.0	0.1	0.0095	16.0	0.1	1.5	1	0	0	1	1	1	1	EF-hand	domain	pair
EF-hand_8	PF13833.1	gi|289596596|ref|YP_003483292.1|	-	0.033	13.8	0.2	0.063	12.9	0.1	1.5	1	0	0	1	1	1	0	EF-hand	domain	pair
EF-hand_5	PF13202.1	gi|289596596|ref|YP_003483292.1|	-	0.067	12.5	0.0	0.15	11.4	0.0	1.5	1	0	0	1	1	1	0	EF	hand
DNA_pol_B	PF00136.16	gi|289596597|ref|YP_003483293.1|	-	1.2e-58	199.1	5.9	1.9e-58	198.4	4.1	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|289596597|ref|YP_003483293.1|	-	1.2e-06	27.6	0.4	2.4e-06	26.6	0.2	1.5	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.4	gi|289596597|ref|YP_003483293.1|	-	2e-05	24.2	0.0	4.8e-05	22.9	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF3502	PF12010.3	gi|289596597|ref|YP_003483293.1|	-	0.026	14.4	1.1	0.17	11.8	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3502)
PUA	PF01472.15	gi|289596598|ref|YP_003483294.1|	-	1.9e-09	37.0	0.1	3.5e-09	36.2	0.0	1.4	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.1	gi|289596598|ref|YP_003483294.1|	-	8.6e-06	25.5	0.0	1.8e-05	24.4	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
DUF4535	PF15054.1	gi|289596598|ref|YP_003483294.1|	-	0.033	13.5	0.0	0.15	11.5	0.0	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4535)
TGT	PF01702.13	gi|289596598|ref|YP_003483294.1|	-	0.13	11.5	0.1	0.72	9.0	0.0	2.2	3	0	0	3	3	3	0	Queuine	tRNA-ribosyltransferase
Prok-RING_1	PF14446.1	gi|289596599|ref|YP_003483295.1|	-	4.5e-17	61.5	4.2	7.5e-17	60.8	2.9	1.4	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
C1_1	PF00130.17	gi|289596599|ref|YP_003483295.1|	-	0.0038	16.9	4.7	0.0067	16.1	3.3	1.4	1	0	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-HC5HC2H	PF13771.1	gi|289596599|ref|YP_003483295.1|	-	0.0066	16.5	3.4	0.028	14.5	2.3	2.1	1	0	0	1	1	1	1	PHD-like	zinc-binding	domain
TPR_2	PF07719.12	gi|289596599|ref|YP_003483295.1|	-	0.007	16.2	13.8	3.9	7.6	0.0	7.8	8	0	0	8	8	8	2	Tetratricopeptide	repeat
PHD	PF00628.24	gi|289596599|ref|YP_003483295.1|	-	0.014	15.0	3.3	0.027	14.1	2.3	1.4	1	0	0	1	1	1	0	PHD-finger
ADK_lid	PF05191.9	gi|289596599|ref|YP_003483295.1|	-	0.028	14.0	7.5	0.0088	15.6	2.6	2.0	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-HC5HC2H_2	PF13832.1	gi|289596599|ref|YP_003483295.1|	-	0.04	13.9	2.4	0.1	12.6	1.7	1.6	1	0	0	1	1	1	0	PHD-zinc-finger	like	domain
TPR_19	PF14559.1	gi|289596599|ref|YP_003483295.1|	-	0.06	13.7	9.9	23	5.3	0.0	7.1	7	1	0	7	7	6	0	Tetratricopeptide	repeat
Fzo_mitofusin	PF04799.8	gi|289596599|ref|YP_003483295.1|	-	0.075	12.4	0.1	0.075	12.4	0.1	8.0	7	3	3	10	10	10	0	fzo-like	conserved	region
TPR_16	PF13432.1	gi|289596599|ref|YP_003483295.1|	-	0.2	12.3	5.8	1.2e+02	3.5	0.0	6.3	7	0	0	7	7	6	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289596599|ref|YP_003483295.1|	-	0.81	9.3	18.2	1.6	8.4	0.5	6.7	8	0	0	8	8	7	0	TPR	repeat
TPR_6	PF13174.1	gi|289596599|ref|YP_003483295.1|	-	1.6	9.3	7.1	1.4e+02	3.2	0.1	6.2	6	0	0	6	6	4	0	Tetratricopeptide	repeat
zinc_ribbon_5	PF13719.1	gi|289596599|ref|YP_003483295.1|	-	1.7	8.3	7.2	9.7	5.8	1.5	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-RING_2	PF13639.1	gi|289596599|ref|YP_003483295.1|	-	3.6	7.4	5.0	6.2	6.7	3.5	1.4	1	0	0	1	1	1	0	Ring	finger	domain
zinc_ribbon_4	PF13717.1	gi|289596599|ref|YP_003483295.1|	-	3.7	7.3	7.3	27	4.5	1.6	2.8	2	0	0	2	2	2	0	zinc-ribbon	domain
ZYG-11_interact	PF05884.7	gi|289596599|ref|YP_003483295.1|	-	7.5	5.5	5.0	14	4.6	0.1	3.3	3	0	0	3	3	3	0	Interactor	of	ZYG-11
Tubulin	PF00091.20	gi|289596600|ref|YP_003483296.1|	-	2.2e-26	93.0	2.4	7.8e-25	87.9	1.6	2.2	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|289596600|ref|YP_003483296.1|	-	3e-16	59.2	0.1	8e-16	57.9	0.1	1.7	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
CPSase_L_chain	PF00289.17	gi|289596600|ref|YP_003483296.1|	-	0.0097	16.0	0.1	0.032	14.3	0.0	2.0	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ThiF	PF00899.16	gi|289596600|ref|YP_003483296.1|	-	0.017	14.9	1.1	0.87	9.4	0.8	2.6	1	1	0	1	1	1	0	ThiF	family
LuxC	PF05893.9	gi|289596600|ref|YP_003483296.1|	-	0.12	11.0	0.1	0.36	9.4	0.0	1.7	2	0	0	2	2	2	0	Acyl-CoA	reductase	(LuxC)
RHH_1	PF01402.16	gi|289596601|ref|YP_003483297.1|	-	5.6e-09	35.5	1.9	2.8e-06	26.9	0.2	2.3	2	0	0	2	2	2	2	Ribbon-helix-helix	protein,	copG	family
DUF1378	PF07125.6	gi|289596601|ref|YP_003483297.1|	-	0.0072	16.2	0.5	6.7	6.7	0.1	2.9	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1378)
Latrotoxin_C	PF15658.1	gi|289596601|ref|YP_003483297.1|	-	0.036	13.8	0.1	0.079	12.7	0.0	1.6	2	0	0	2	2	2	0	Latrotoxin	C-terminal	domain
DUF3349	PF11829.3	gi|289596601|ref|YP_003483297.1|	-	0.043	14.2	0.5	1.1	9.7	0.0	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3349)
DUF2191	PF09957.4	gi|289596601|ref|YP_003483297.1|	-	0.06	13.1	0.6	7.6	6.4	0.1	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
DUF1832	PF08870.6	gi|289596601|ref|YP_003483297.1|	-	0.063	12.9	0.1	0.11	12.2	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1832)
CHASE3	PF05227.8	gi|289596601|ref|YP_003483297.1|	-	0.079	12.6	1.4	0.3	10.7	0.1	2.0	1	1	1	2	2	2	0	CHASE3	domain
TMP_2	PF06791.8	gi|289596601|ref|YP_003483297.1|	-	0.1	12.2	0.0	4.2	6.9	0.0	2.0	1	1	1	2	2	2	0	Prophage	tail	length	tape	measure	protein
tRNA_bind	PF01588.15	gi|289596602|ref|YP_003483298.1|	-	9.7e-16	57.4	0.0	2e-15	56.3	0.0	1.5	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
V-SNARE	PF05008.10	gi|289596602|ref|YP_003483298.1|	-	0.13	12.4	0.3	0.13	12.4	0.2	1.7	2	0	0	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF1743	PF08489.6	gi|289596603|ref|YP_003483299.1|	-	5.4e-36	122.9	0.0	1.2e-35	121.8	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.20	gi|289596603|ref|YP_003483299.1|	-	8.9e-09	35.0	0.9	7.3e-08	32.1	0.2	2.6	3	0	0	3	3	3	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.1	gi|289596603|ref|YP_003483299.1|	-	5.2e-05	23.0	0.0	0.0001	22.0	0.0	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|289596603|ref|YP_003483299.1|	-	0.017	14.7	0.6	0.054	13.1	0.4	1.8	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596603|ref|YP_003483299.1|	-	0.019	14.7	3.0	0.042	13.6	2.1	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Stn1	PF10451.4	gi|289596603|ref|YP_003483299.1|	-	0.019	13.7	0.0	0.032	13.0	0.0	1.3	1	0	0	1	1	1	0	Telomere	regulation	protein	Stn1
RNA_pol_Rpb6	PF01192.17	gi|289596604|ref|YP_003483300.1|	-	9.9e-18	63.6	0.0	1.3e-17	63.2	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Beta-Casp	PF10996.3	gi|289596605|ref|YP_003483301.1|	-	7.6e-20	71.1	0.0	1.4e-19	70.2	0.0	1.4	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B_2	PF12706.2	gi|289596605|ref|YP_003483301.1|	-	3.4e-13	49.5	0.4	2e-11	43.8	0.0	2.2	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|289596605|ref|YP_003483301.1|	-	2.4e-12	46.4	0.1	5e-12	45.4	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B	PF00753.22	gi|289596605|ref|YP_003483301.1|	-	1.5e-11	44.2	0.6	3.2e-11	43.2	0.4	1.6	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
TrkA_C	PF02080.16	gi|289596606|ref|YP_003483302.1|	-	5.1e-15	54.8	0.0	1.2e-14	53.5	0.0	1.7	2	0	0	2	2	2	1	TrkA-C	domain
PhoU	PF01895.14	gi|289596606|ref|YP_003483302.1|	-	4.2e-13	49.5	4.3	6.2e-13	49.0	3.0	1.3	1	0	0	1	1	1	1	PhoU	domain
PhoU_div	PF01865.11	gi|289596606|ref|YP_003483302.1|	-	1e-05	24.8	2.6	1.4e-05	24.3	1.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
TrkA_C	PF02080.16	gi|289596607|ref|YP_003483303.1|	-	3.1e-15	55.5	0.3	6e-15	54.5	0.2	1.5	1	0	0	1	1	1	1	TrkA-C	domain
PhoU	PF01895.14	gi|289596607|ref|YP_003483303.1|	-	0.0001	22.6	4.8	0.00015	22.1	3.3	1.3	1	0	0	1	1	1	1	PhoU	domain
CCDC92	PF14916.1	gi|289596607|ref|YP_003483303.1|	-	0.036	13.6	0.1	0.07	12.7	0.1	1.5	1	0	0	1	1	1	0	Coiled-coil	domain	of	unknown	function
CENP-F_leu_zip	PF10473.4	gi|289596607|ref|YP_003483303.1|	-	0.048	13.5	0.5	0.068	13.0	0.3	1.3	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Cupin_6	PF12852.2	gi|289596607|ref|YP_003483303.1|	-	0.073	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Cupin
HALZ	PF02183.13	gi|289596607|ref|YP_003483303.1|	-	0.077	12.7	0.1	0.17	11.6	0.1	1.6	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
ERM	PF00769.14	gi|289596607|ref|YP_003483303.1|	-	0.099	12.1	0.1	0.14	11.7	0.1	1.2	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
DUF4201	PF13870.1	gi|289596607|ref|YP_003483303.1|	-	0.12	11.7	0.7	0.17	11.2	0.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
DUF134	PF02001.11	gi|289596608|ref|YP_003483304.1|	-	1e-25	89.6	0.0	1.2e-25	89.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
Sigma70_r4_2	PF08281.7	gi|289596608|ref|YP_003483304.1|	-	3.8e-07	29.4	0.1	5.3e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|289596608|ref|YP_003483304.1|	-	9.1e-06	25.1	0.1	3e-05	23.5	0.0	1.8	2	0	0	2	2	2	1	Homeodomain-like	domain
Sigma70_r4	PF04545.11	gi|289596608|ref|YP_003483304.1|	-	1.2e-05	24.4	0.2	1.9e-05	23.9	0.1	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_28	PF13518.1	gi|289596608|ref|YP_003483304.1|	-	0.00035	20.5	6.0	0.00082	19.3	0.0	2.6	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|289596608|ref|YP_003483304.1|	-	0.0005	20.2	0.0	0.001	19.2	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|289596608|ref|YP_003483304.1|	-	0.00076	19.6	0.1	0.00099	19.2	0.0	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|289596608|ref|YP_003483304.1|	-	0.0015	18.3	0.1	0.0024	17.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
Sigma70_ECF	PF07638.6	gi|289596608|ref|YP_003483304.1|	-	0.0015	18.2	0.1	0.0018	17.9	0.1	1.1	1	0	0	1	1	1	1	ECF	sigma	factor
HTH_psq	PF05225.11	gi|289596608|ref|YP_003483304.1|	-	0.0021	17.5	0.0	0.0032	16.9	0.0	1.3	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
HTH_11	PF08279.7	gi|289596608|ref|YP_003483304.1|	-	0.0027	17.2	0.0	0.0043	16.6	0.0	1.5	1	1	0	1	1	1	1	HTH	domain
GerE	PF00196.14	gi|289596608|ref|YP_003483304.1|	-	0.0069	15.6	0.1	0.0086	15.3	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_37	PF13744.1	gi|289596608|ref|YP_003483304.1|	-	0.011	15.5	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|289596608|ref|YP_003483304.1|	-	0.032	13.7	0.0	0.096	12.2	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
HTH_10	PF04967.7	gi|289596608|ref|YP_003483304.1|	-	0.034	13.7	0.2	0.07	12.7	0.0	1.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
HTH_38	PF13936.1	gi|289596608|ref|YP_003483304.1|	-	0.051	13.1	0.0	0.076	12.5	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596608|ref|YP_003483304.1|	-	0.11	11.9	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
H_PPase	PF03030.11	gi|289596609|ref|YP_003483305.1|	-	4.8e-275	914.1	41.3	5.5e-275	913.9	28.6	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
MS_channel	PF00924.13	gi|289596610|ref|YP_003483306.1|	-	2.7e-52	177.1	3.3	7.6e-52	175.6	2.3	1.8	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
FixG_C	PF11614.3	gi|289596610|ref|YP_003483306.1|	-	0.0064	16.5	0.1	0.017	15.1	0.0	1.6	2	0	0	2	2	2	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
AAA_18	PF13238.1	gi|289596612|ref|YP_003483308.1|	-	2.2e-10	40.9	0.9	3e-10	40.5	0.6	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289596612|ref|YP_003483308.1|	-	1.1e-08	35.9	1.7	1.4e-08	35.6	1.2	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|289596612|ref|YP_003483308.1|	-	0.00012	21.9	0.0	0.00021	21.1	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|289596612|ref|YP_003483308.1|	-	0.015	14.3	0.1	0.03	13.4	0.0	1.5	1	1	0	1	1	1	0	Zeta	toxin
DZR	PF12773.2	gi|289596613|ref|YP_003483309.1|	-	0.012	15.4	0.2	0.018	14.8	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DNA_ligase_ZBD	PF03119.11	gi|289596613|ref|YP_003483309.1|	-	0.017	14.8	0.5	0.32	10.7	0.0	2.7	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C4_Topoisom	PF01396.14	gi|289596613|ref|YP_003483309.1|	-	0.021	14.3	0.4	0.7	9.4	0.1	2.4	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_2	PF13240.1	gi|289596613|ref|YP_003483309.1|	-	0.028	13.9	1.8	0.17	11.4	1.4	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|289596613|ref|YP_003483309.1|	-	0.071	12.3	2.3	0.32	10.2	0.1	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596613|ref|YP_003483309.1|	-	0.098	12.3	0.5	0.96	9.2	0.6	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-CHCC	PF10276.4	gi|289596613|ref|YP_003483309.1|	-	0.13	12.0	1.2	0.24	11.2	0.9	1.4	1	0	0	1	1	1	0	Zinc-finger	domain
RNA_POL_M_15KD	PF02150.11	gi|289596613|ref|YP_003483309.1|	-	0.17	11.6	0.6	0.64	9.7	0.0	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-ISL3	PF14690.1	gi|289596613|ref|YP_003483309.1|	-	0.5	10.4	2.8	1.4	8.9	0.0	2.4	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
CW_binding_1	PF01473.15	gi|289596613|ref|YP_003483309.1|	-	0.56	10.4	10.2	1.4	9.1	0.5	2.5	2	0	0	2	2	2	0	Putative	cell	wall	binding	repeat
zf-Di19	PF05605.7	gi|289596613|ref|YP_003483309.1|	-	2.7	8.1	4.6	5.6	7.1	0.5	2.2	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Zn_ribbon_recom	PF13408.1	gi|289596613|ref|YP_003483309.1|	-	4.3	7.6	6.4	0.61	10.3	1.5	1.9	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Pterin_bind	PF00809.17	gi|289596614|ref|YP_003483310.1|	-	3.7e-77	258.4	0.0	6.2e-77	257.6	0.0	1.4	1	0	0	1	1	1	1	Pterin	binding	enzyme
CdhD	PF03599.11	gi|289596614|ref|YP_003483310.1|	-	0.036	12.5	0.1	0.086	11.3	0.1	1.7	1	1	0	1	1	1	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
CAT_RBD	PF03123.10	gi|289596614|ref|YP_003483310.1|	-	0.049	13.3	0.2	0.12	12.0	0.1	1.6	1	0	0	1	1	1	0	CAT	RNA	binding	domain
PEP_mutase	PF13714.1	gi|289596614|ref|YP_003483310.1|	-	0.12	11.6	0.0	0.37	9.9	0.0	1.8	2	1	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
EAV_GS	PF01309.13	gi|289596614|ref|YP_003483310.1|	-	0.17	11.3	0.0	0.82	9.1	0.0	1.9	2	0	0	2	2	2	0	Equine	arteritis	virus	small	envelope	glycoprotein
Xan_ur_permease	PF00860.15	gi|289596615|ref|YP_003483311.1|	-	2.4e-38	131.6	42.7	2.4e-38	131.6	29.6	1.5	1	1	0	1	1	1	1	Permease	family
tRNA_SAD	PF07973.9	gi|289596616|ref|YP_003483312.1|	-	0.0007	19.4	0.0	0.0015	18.3	0.0	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DUF2058	PF09831.4	gi|289596616|ref|YP_003483312.1|	-	0.053	13.4	0.0	0.067	13.0	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2058)
GTP_EFTU	PF00009.22	gi|289596617|ref|YP_003483313.1|	-	9.6e-34	116.4	0.4	5.8e-33	113.9	0.3	2.1	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.3	gi|289596617|ref|YP_003483313.1|	-	2.8e-22	78.6	1.6	2.8e-22	78.6	1.1	2.3	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|289596617|ref|YP_003483313.1|	-	1.1e-17	63.9	6.9	3.4e-12	46.2	0.0	2.8	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|289596617|ref|YP_003483313.1|	-	1.1e-14	53.7	2.9	1.1e-14	53.7	2.0	2.7	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|289596617|ref|YP_003483313.1|	-	9e-07	28.8	0.1	2.3e-06	27.5	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|289596617|ref|YP_003483313.1|	-	0.00019	21.8	0.0	0.00054	20.4	0.0	1.8	1	0	0	1	1	1	1	Miro-like	protein
MobB	PF03205.9	gi|289596617|ref|YP_003483313.1|	-	0.00072	19.2	0.4	0.23	11.1	0.0	2.9	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Dynamin_N	PF00350.18	gi|289596617|ref|YP_003483313.1|	-	0.0019	18.0	0.1	0.23	11.2	0.0	2.9	2	1	1	3	3	3	1	Dynamin	family
ATP_bind_1	PF03029.12	gi|289596617|ref|YP_003483313.1|	-	0.015	14.8	0.0	0.044	13.3	0.0	1.7	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Ras	PF00071.17	gi|289596617|ref|YP_003483313.1|	-	0.021	14.2	0.0	0.042	13.2	0.0	1.5	1	0	0	1	1	1	0	Ras	family
Sec23_helical	PF04815.10	gi|289596617|ref|YP_003483313.1|	-	0.19	11.2	0.0	0.77	9.2	0.0	1.9	2	0	0	2	2	2	0	Sec23/Sec24	helical	domain
PAPS_reduct	PF01507.14	gi|289596618|ref|YP_003483314.1|	-	5e-31	107.8	0.0	7.9e-31	107.2	0.0	1.3	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_4	PF01902.12	gi|289596618|ref|YP_003483314.1|	-	0.031	13.6	0.0	0.055	12.8	0.0	1.4	1	0	0	1	1	1	0	ATP-binding	region
BPL_LplA_LipB	PF03099.14	gi|289596619|ref|YP_003483315.1|	-	1.6e-18	66.9	0.0	2.1e-18	66.5	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.12	gi|289596619|ref|YP_003483315.1|	-	3e-08	33.1	0.9	4.5e-08	32.6	0.2	1.7	2	0	0	2	2	2	1	Biotin	protein	ligase	C	terminal	domain
LemA	PF04011.7	gi|289596619|ref|YP_003483315.1|	-	0.11	11.5	0.0	0.17	10.9	0.0	1.2	1	0	0	1	1	1	0	LemA	family
CARDB	PF07705.6	gi|289596620|ref|YP_003483316.1|	-	1.6e-16	60.1	27.7	1.5e-09	37.8	1.1	7.2	7	1	0	7	7	7	3	CARDB
VWA_2	PF13519.1	gi|289596620|ref|YP_003483316.1|	-	2.3e-15	57.1	0.1	4.6e-15	56.1	0.1	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF1628	PF07790.6	gi|289596620|ref|YP_003483316.1|	-	1.9e-10	41.3	0.7	7.1e-09	36.3	0.0	3.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1628)
VWA	PF00092.23	gi|289596620|ref|YP_003483316.1|	-	4.6e-10	39.5	0.1	9.4e-10	38.4	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|289596620|ref|YP_003483316.1|	-	0.0001	22.0	0.0	0.0013	18.4	0.0	2.2	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|289596620|ref|YP_003483316.1|	-	0.7	8.9	0.0	1.5	7.9	0.0	1.4	1	0	0	1	1	1	0	VWA	domain	containing	CoxE-like	protein
PK	PF00224.16	gi|289596621|ref|YP_003483317.1|	-	3.4e-106	354.7	7.9	5.3e-106	354.1	5.5	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|289596621|ref|YP_003483317.1|	-	9.3e-30	102.5	0.0	2.6e-29	101.1	0.0	1.7	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|289596621|ref|YP_003483317.1|	-	0.0011	17.8	0.7	0.003	16.5	0.1	1.8	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
DDE_Tnp_1	PF01609.16	gi|289596623|ref|YP_003483319.1|	-	3.9e-19	69.0	0.3	3.9e-19	69.0	0.2	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596623|ref|YP_003483319.1|	-	0.00019	21.2	0.0	0.00019	21.2	0.0	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596623|ref|YP_003483319.1|	-	0.0013	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
Phage_GPA	PF05840.8	gi|289596623|ref|YP_003483319.1|	-	0.074	11.7	0.2	0.11	11.1	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
DDE_Tnp_1_2	PF13586.1	gi|289596623|ref|YP_003483319.1|	-	0.093	12.9	2.1	0.26	11.4	0.4	2.4	2	1	0	2	2	2	0	Transposase	DDE	domain
HTH_38	PF13936.1	gi|289596623|ref|YP_003483319.1|	-	0.095	12.2	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
KaiC	PF06745.8	gi|289596624|ref|YP_003483320.1|	-	3.8e-67	225.7	0.1	4.4e-67	225.5	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596624|ref|YP_003483320.1|	-	2.5e-08	33.5	0.0	3.6e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289596624|ref|YP_003483320.1|	-	0.00013	21.8	0.1	0.0003	20.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.6	gi|289596624|ref|YP_003483320.1|	-	0.00037	19.4	0.1	0.00054	18.9	0.1	1.4	1	1	0	1	1	1	1	Rad51
AAA_22	PF13401.1	gi|289596624|ref|YP_003483320.1|	-	0.00091	19.3	0.0	0.0015	18.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
HrcA	PF01628.16	gi|289596624|ref|YP_003483320.1|	-	0.0011	18.5	0.7	0.0016	18.0	0.5	1.1	1	0	0	1	1	1	1	HrcA	protein	C	terminal	domain
Arch_ATPase	PF01637.13	gi|289596624|ref|YP_003483320.1|	-	0.0076	15.9	0.3	0.015	15.0	0.2	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
DUF775	PF05603.7	gi|289596624|ref|YP_003483320.1|	-	0.013	15.0	0.4	0.019	14.5	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF775)
AAA	PF00004.24	gi|289596624|ref|YP_003483320.1|	-	0.018	15.2	0.2	0.053	13.7	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_10	PF12846.2	gi|289596624|ref|YP_003483320.1|	-	0.023	14.1	0.0	0.063	12.7	0.0	1.6	2	0	0	2	2	2	0	AAA-like	domain
CbiA	PF01656.18	gi|289596624|ref|YP_003483320.1|	-	0.048	13.0	0.1	0.063	12.6	0.0	1.2	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.12	gi|289596624|ref|YP_003483320.1|	-	0.05	13.0	0.0	0.16	11.3	0.0	1.8	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
HTH_23	PF13384.1	gi|289596625|ref|YP_003483321.1|	-	0.00014	21.3	0.0	0.00042	19.8	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
GerE	PF00196.14	gi|289596625|ref|YP_003483321.1|	-	0.00016	20.9	0.2	0.0041	16.4	0.1	2.4	1	1	1	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|289596625|ref|YP_003483321.1|	-	0.00017	20.9	0.1	0.0004	19.8	0.1	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_10	PF04967.7	gi|289596625|ref|YP_003483321.1|	-	0.0014	18.1	0.0	0.0035	16.8	0.0	1.7	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|289596625|ref|YP_003483321.1|	-	0.0031	16.8	0.1	0.0063	15.8	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF2795	PF11387.3	gi|289596625|ref|YP_003483321.1|	-	0.0047	16.7	0.0	0.014	15.2	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2795)
Sigma70_r4	PF04545.11	gi|289596625|ref|YP_003483321.1|	-	0.0068	15.6	0.0	0.017	14.4	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Mga	PF08280.6	gi|289596625|ref|YP_003483321.1|	-	0.0096	15.6	0.1	0.018	14.8	0.0	1.4	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_Tnp_ISL3	PF13542.1	gi|289596625|ref|YP_003483321.1|	-	0.019	14.1	0.0	0.15	11.2	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_28	PF13518.1	gi|289596625|ref|YP_003483321.1|	-	0.02	14.8	0.1	0.087	12.8	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
Dimer_Tnp_Tn5	PF02281.11	gi|289596625|ref|YP_003483321.1|	-	0.02	14.9	0.0	0.042	13.9	0.0	1.6	2	0	0	2	2	1	0	Transposase	Tn5	dimerisation	domain
Sigma70_r3	PF04539.11	gi|289596625|ref|YP_003483321.1|	-	0.022	14.6	0.1	0.055	13.3	0.0	1.6	1	0	0	1	1	1	0	Sigma-70	region	3
HTH_17	PF12728.2	gi|289596625|ref|YP_003483321.1|	-	0.027	14.7	0.0	0.073	13.3	0.0	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain
RepL	PF05732.6	gi|289596625|ref|YP_003483321.1|	-	0.045	12.9	0.1	0.07	12.3	0.0	1.3	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
MTH865	PF07747.6	gi|289596625|ref|YP_003483321.1|	-	0.052	13.1	0.0	0.32	10.6	0.0	2.2	2	0	0	2	2	2	0	MTH865-like	family
HTH_38	PF13936.1	gi|289596625|ref|YP_003483321.1|	-	0.068	12.7	0.7	0.29	10.6	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|289596625|ref|YP_003483321.1|	-	0.077	12.6	0.0	0.29	10.8	0.0	2.0	1	0	0	1	1	1	0	HTH	domain
HTH_29	PF13551.1	gi|289596625|ref|YP_003483321.1|	-	0.085	13.0	0.1	0.3	11.2	0.0	1.9	1	1	1	2	2	2	0	Winged	helix-turn	helix
HTH_3	PF01381.17	gi|289596625|ref|YP_003483321.1|	-	0.094	12.5	0.1	0.2	11.5	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix
Topoisom_bac	PF01131.15	gi|289596626|ref|YP_003483322.1|	-	4.2e-78	262.9	0.1	3.8e-77	259.7	0.1	2.2	1	1	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|289596626|ref|YP_003483322.1|	-	5.2e-24	84.1	0.0	1.9e-23	82.3	0.0	2.1	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|289596626|ref|YP_003483322.1|	-	1.9e-12	46.9	0.0	4e-12	45.9	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|289596626|ref|YP_003483322.1|	-	9e-06	25.4	0.1	0.052	13.4	0.0	3.8	3	1	0	3	3	2	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|289596626|ref|YP_003483322.1|	-	5.3e-05	23.1	0.4	0.00015	21.6	0.3	1.8	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
NRDD	PF13597.1	gi|289596626|ref|YP_003483322.1|	-	0.003	15.7	0.1	0.0049	15.0	0.1	1.2	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
Toprim_4	PF13662.1	gi|289596626|ref|YP_003483322.1|	-	0.06	13.3	0.0	0.15	12.0	0.0	1.7	1	0	0	1	1	1	0	Toprim	domain
DZR	PF12773.2	gi|289596626|ref|YP_003483322.1|	-	0.07	12.9	4.6	1.6	8.6	0.5	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
HypA	PF01155.14	gi|289596626|ref|YP_003483322.1|	-	0.088	12.4	0.7	0.29	10.8	0.0	2.0	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-trcl	PF13451.1	gi|289596626|ref|YP_003483322.1|	-	0.18	11.4	1.0	6.1	6.5	0.0	2.5	2	0	0	2	2	2	0	Probable	zinc-binding	domain
DUF3618	PF12277.3	gi|289596626|ref|YP_003483322.1|	-	0.19	11.7	5.2	0.58	10.2	3.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3618)
SNF2_N	PF00176.18	gi|289596626|ref|YP_003483322.1|	-	0.23	10.2	0.0	0.4	9.4	0.0	1.3	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
zinc-ribbons_6	PF07191.7	gi|289596626|ref|YP_003483322.1|	-	0.23	11.2	5.9	0.91	9.3	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbons
AAA_30	PF13604.1	gi|289596626|ref|YP_003483322.1|	-	0.27	10.7	0.0	26	4.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
DNA_ligase_ZBD	PF03119.11	gi|289596626|ref|YP_003483322.1|	-	0.33	10.6	2.0	3.5	7.4	0.2	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596626|ref|YP_003483322.1|	-	0.66	9.8	4.6	0.8	9.5	0.0	2.9	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
TGS	PF02824.16	gi|289596627|ref|YP_003483323.1|	-	0.064	13.1	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	TGS	domain
TFIIS_C	PF01096.13	gi|289596628|ref|YP_003483324.1|	-	3.3e-20	71.4	10.1	7e-20	70.3	0.9	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.11	gi|289596628|ref|YP_003483324.1|	-	1.9e-12	46.6	1.0	1.9e-12	46.6	0.7	3.3	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.6	gi|289596628|ref|YP_003483324.1|	-	1.4e-09	37.4	4.7	0.00034	20.2	0.3	2.4	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289596628|ref|YP_003483324.1|	-	1.4e-07	31.1	11.2	0.11	12.3	0.0	4.1	3	1	0	3	3	3	3	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.6	gi|289596628|ref|YP_003483324.1|	-	5.2e-07	29.0	10.4	0.00025	20.4	1.2	3.4	3	1	0	3	3	3	1	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596628|ref|YP_003483324.1|	-	6.2e-07	28.7	14.7	0.13	11.7	3.6	4.1	3	1	0	3	3	3	3	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|289596628|ref|YP_003483324.1|	-	6.8e-07	28.5	10.4	0.00085	18.5	0.3	3.3	2	1	1	3	3	3	2	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|289596628|ref|YP_003483324.1|	-	9.4e-07	28.5	14.8	0.00059	19.5	2.8	3.3	2	2	0	2	2	2	2	Transposase	zinc-ribbon	domain
DZR	PF12773.2	gi|289596628|ref|YP_003483324.1|	-	1.3e-06	28.1	8.1	0.0021	17.8	0.4	2.8	2	1	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|289596628|ref|YP_003483324.1|	-	1.4e-06	27.2	14.8	0.078	12.2	3.4	4.1	3	1	1	4	4	4	3	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|289596628|ref|YP_003483324.1|	-	0.00016	21.1	10.0	0.075	12.5	0.2	4.0	3	1	1	4	4	4	1	Topoisomerase	DNA	binding	C4	zinc	finger
Auto_anti-p27	PF06677.7	gi|289596628|ref|YP_003483324.1|	-	0.00018	21.2	14.4	0.0016	18.1	2.4	3.3	3	0	0	3	3	3	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-ISL3	PF14690.1	gi|289596628|ref|YP_003483324.1|	-	0.00045	20.1	12.7	1.6	8.8	0.4	4.1	3	1	1	4	4	4	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Prok-RING_1	PF14446.1	gi|289596628|ref|YP_003483324.1|	-	0.00059	19.5	4.9	0.37	10.5	0.3	3.2	3	0	0	3	3	3	1	Prokaryotic	RING	finger	family	1
zinc_ribbon_5	PF13719.1	gi|289596628|ref|YP_003483324.1|	-	0.0006	19.3	10.1	0.47	10.0	0.3	4.2	4	0	0	4	4	4	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|289596628|ref|YP_003483324.1|	-	0.00078	19.0	10.0	0.48	10.1	0.2	4.2	4	0	0	4	4	4	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596628|ref|YP_003483324.1|	-	0.00084	18.9	17.8	0.24	11.0	0.4	4.2	4	0	0	4	4	4	2	Uncharacterised	protein	family	UPF0547
HypA	PF01155.14	gi|289596628|ref|YP_003483324.1|	-	0.0011	18.6	6.1	0.025	14.2	1.2	2.6	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DUF4428	PF14471.1	gi|289596628|ref|YP_003483324.1|	-	0.0011	18.6	3.8	0.91	9.3	0.6	3.3	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4428)
Rubredoxin	PF00301.15	gi|289596628|ref|YP_003483324.1|	-	0.0011	18.7	12.1	0.26	11.1	0.2	4.2	3	1	1	4	4	4	1	Rubredoxin
PolC_DP2	PF03833.8	gi|289596628|ref|YP_003483324.1|	-	0.0017	16.1	3.0	0.31	8.6	0.1	2.0	1	1	1	2	2	2	2	DNA	polymerase	II	large	subunit	DP2
DUF2296	PF10058.4	gi|289596628|ref|YP_003483324.1|	-	0.0019	17.9	11.6	0.016	14.9	1.3	3.7	2	2	0	2	2	2	1	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DNA_RNApol_7kD	PF03604.8	gi|289596628|ref|YP_003483324.1|	-	0.0036	16.7	11.1	0.94	8.9	0.0	3.9	3	1	1	4	4	4	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
A2L_zn_ribbon	PF08792.5	gi|289596628|ref|YP_003483324.1|	-	0.0038	16.6	11.8	2.7	7.5	0.2	4.3	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
IBR	PF01485.16	gi|289596628|ref|YP_003483324.1|	-	0.004	17.0	8.0	0.94	9.3	0.7	3.1	2	1	1	3	3	3	2	IBR	domain
Zn_ribbon_recom	PF13408.1	gi|289596628|ref|YP_003483324.1|	-	0.0044	17.2	11.1	0.27	11.5	1.3	3.4	2	2	0	2	2	2	1	Recombinase	zinc	beta	ribbon	domain
GFA	PF04828.9	gi|289596628|ref|YP_003483324.1|	-	0.0053	16.6	9.1	11	6.0	0.1	4.0	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
Terminase_GpA	PF05876.7	gi|289596628|ref|YP_003483324.1|	-	0.0088	14.4	2.5	0.0088	14.4	1.7	2.1	2	0	0	2	2	2	1	Phage	terminase	large	subunit	(GpA)
Ribosomal_L32p	PF01783.18	gi|289596628|ref|YP_003483324.1|	-	0.01	15.9	4.7	2.6	8.2	0.2	3.3	2	1	1	3	3	3	0	Ribosomal	L32p	protein	family
Mut7-C	PF01927.11	gi|289596628|ref|YP_003483324.1|	-	0.011	15.7	2.4	0.8	9.6	1.6	2.9	1	1	1	2	2	2	0	Mut7-C	RNAse	domain
zf-IS66	PF13005.2	gi|289596628|ref|YP_003483324.1|	-	0.013	15.4	14.6	1.9	8.5	0.1	4.2	2	2	2	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Nudix_N_2	PF14803.1	gi|289596628|ref|YP_003483324.1|	-	0.013	15.1	14.7	2.1	8.0	0.1	4.1	3	1	1	4	4	4	0	Nudix	N-terminal
zf-C2HC5	PF06221.8	gi|289596628|ref|YP_003483324.1|	-	0.015	15.0	3.6	0.027	14.2	0.2	2.6	3	0	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
Ribosomal_L37e	PF01907.14	gi|289596628|ref|YP_003483324.1|	-	0.016	14.9	4.0	0.27	11.0	0.1	3.0	3	0	0	3	3	3	0	Ribosomal	protein	L37e
zinc-ribbons_6	PF07191.7	gi|289596628|ref|YP_003483324.1|	-	0.019	14.7	0.4	0.019	14.7	0.3	2.9	2	1	0	2	2	2	0	zinc-ribbons
Zn-ribbon_8	PF09723.5	gi|289596628|ref|YP_003483324.1|	-	0.019	14.8	12.8	3.9	7.4	0.0	4.2	3	1	0	4	4	4	0	Zinc	ribbon	domain
zf-UBP	PF02148.14	gi|289596628|ref|YP_003483324.1|	-	0.024	14.7	5.4	29	4.8	3.8	3.1	1	1	0	1	1	1	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
FYDLN_acid	PF09538.5	gi|289596628|ref|YP_003483324.1|	-	0.028	15.0	9.9	2.3	8.8	1.4	3.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
RRN7	PF11781.3	gi|289596628|ref|YP_003483324.1|	-	0.048	13.1	11.4	0.2	11.1	0.6	3.7	3	1	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zf-C2H2_4	PF13894.1	gi|289596628|ref|YP_003483324.1|	-	0.066	13.5	8.3	21	5.7	0.6	4.1	4	0	0	4	4	4	0	C2H2-type	zinc	finger
Lar_restr_allev	PF14354.1	gi|289596628|ref|YP_003483324.1|	-	0.08	13.2	14.6	0.35	11.1	2.2	3.6	1	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-RanBP	PF00641.13	gi|289596628|ref|YP_003483324.1|	-	0.082	12.0	1.2	0.082	12.0	0.8	3.9	4	0	0	4	4	4	0	Zn-finger	in	Ran	binding	protein	and	others
Ogr_Delta	PF04606.7	gi|289596628|ref|YP_003483324.1|	-	0.084	12.5	14.2	3.2	7.4	0.3	3.9	3	1	0	3	3	3	0	Ogr/Delta-like	zinc	finger
DNA_ligase_ZBD	PF03119.11	gi|289596628|ref|YP_003483324.1|	-	0.14	11.9	9.4	4.3	7.1	0.1	3.6	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF164	PF02591.10	gi|289596628|ref|YP_003483324.1|	-	0.15	11.9	7.5	12	5.8	0.1	4.0	3	1	1	4	4	4	0	Putative	zinc	ribbon	domain
TerY-C	PF15616.1	gi|289596628|ref|YP_003483324.1|	-	0.15	11.9	9.1	2	8.3	1.0	2.7	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
zf-RING_3	PF14369.1	gi|289596628|ref|YP_003483324.1|	-	0.16	12.0	11.2	2.6	8.1	0.0	3.9	3	1	0	3	3	3	0	zinc-finger
zf-C4pol	PF14260.1	gi|289596628|ref|YP_003483324.1|	-	0.18	11.8	2.8	2.1	8.4	0.1	2.6	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DUF1610	PF07754.6	gi|289596628|ref|YP_003483324.1|	-	0.22	11.6	23.1	0.78	9.9	0.8	4.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
FYVE_2	PF02318.11	gi|289596628|ref|YP_003483324.1|	-	0.22	11.4	3.6	3.1	7.7	0.3	2.3	1	1	1	2	2	2	0	FYVE-type	zinc	finger
zf-TFIIB	PF13453.1	gi|289596628|ref|YP_003483324.1|	-	0.23	10.6	14.2	0.13	11.4	1.6	3.3	2	2	0	2	2	2	0	Transcription	factor	zinc-finger
VP_N-CPKC	PF11475.3	gi|289596628|ref|YP_003483324.1|	-	0.24	10.9	6.9	14	5.2	0.1	3.6	3	0	0	3	3	3	0	Virion	protein	N	terminal	domain
PHD	PF00628.24	gi|289596628|ref|YP_003483324.1|	-	0.31	10.7	13.4	0.79	9.4	1.1	3.4	2	2	0	2	2	2	0	PHD-finger
Rpr2	PF04032.11	gi|289596628|ref|YP_003483324.1|	-	0.38	10.6	6.6	1.3e+02	2.5	4.6	3.0	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
CpXC	PF14353.1	gi|289596628|ref|YP_003483324.1|	-	0.41	10.6	11.7	1.7	8.6	0.0	3.7	1	1	2	3	3	3	0	CpXC	protein
DUF2082	PF09855.4	gi|289596628|ref|YP_003483324.1|	-	0.42	10.4	11.9	12	5.7	0.0	4.0	3	1	1	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-Sec23_Sec24	PF04810.10	gi|289596628|ref|YP_003483324.1|	-	0.46	10.0	8.1	5.6	6.6	0.9	3.6	3	1	0	3	3	3	0	Sec23/Sec24	zinc	finger
zf-RING_4	PF14570.1	gi|289596628|ref|YP_003483324.1|	-	0.47	10.0	7.2	21	4.7	0.0	3.2	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
DUF2318	PF10080.4	gi|289596628|ref|YP_003483324.1|	-	0.55	10.0	4.5	3.9	7.2	0.3	3.1	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2318)
YhfH	PF14149.1	gi|289596628|ref|YP_003483324.1|	-	0.77	9.6	7.3	55	3.6	0.0	4.0	4	0	0	4	4	4	0	YhfH-like	protein
NMD3	PF04981.8	gi|289596628|ref|YP_003483324.1|	-	0.85	8.6	7.5	2	7.4	0.7	2.5	1	1	1	2	2	2	0	NMD3	family
zf-HIT	PF04438.11	gi|289596628|ref|YP_003483324.1|	-	0.89	9.2	13.2	2.7	7.7	0.2	3.9	3	1	0	3	3	3	0	HIT	zinc	finger
DUF2387	PF09526.5	gi|289596628|ref|YP_003483324.1|	-	0.9	9.5	11.0	4.2	7.3	0.7	3.1	2	2	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Herpes_UL49_1	PF03117.9	gi|289596628|ref|YP_003483324.1|	-	1.2	8.1	4.8	24	3.9	0.0	3.0	1	1	2	3	3	3	0	UL49	family
GATA	PF00320.22	gi|289596628|ref|YP_003483324.1|	-	1.3	8.4	6.7	7.2	6.0	0.0	3.2	3	1	0	3	3	3	0	GATA	zinc	finger
zf-C2H2	PF00096.21	gi|289596628|ref|YP_003483324.1|	-	1.3	9.4	10.5	30	5.2	0.3	4.1	4	0	0	4	4	4	0	Zinc	finger,	C2H2	type
zf-CCHC_5	PF14787.1	gi|289596628|ref|YP_003483324.1|	-	1.5	8.3	15.4	0.72	9.3	0.1	3.5	4	0	0	4	4	3	0	GAG-polyprotein	viral	zinc-finger
Cys_rich_KTR	PF14205.1	gi|289596628|ref|YP_003483324.1|	-	1.9	7.9	12.4	9.5	5.7	0.2	4.0	4	1	0	4	4	4	0	Cysteine-rich	KTR
zf-H2C2_2	PF13465.1	gi|289596628|ref|YP_003483324.1|	-	2.2	8.7	12.8	24	5.4	0.1	4.0	3	1	1	4	4	4	0	Zinc-finger	double	domain
Prim_Zn_Ribbon	PF08273.7	gi|289596628|ref|YP_003483324.1|	-	2.3	8.3	15.7	27	4.9	4.7	3.9	3	1	0	3	3	3	0	Zinc-binding	domain	of	primase-helicase
zf-C3HC4_2	PF13923.1	gi|289596628|ref|YP_003483324.1|	-	2.4	8.2	9.3	14	5.7	0.1	3.5	3	1	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1936	PF09151.5	gi|289596628|ref|YP_003483324.1|	-	2.6	7.6	16.8	8.7	5.9	0.4	3.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
DUF4379	PF14311.1	gi|289596628|ref|YP_003483324.1|	-	3.1	7.6	16.9	0.85	9.4	0.5	4.0	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF4379)
Baculo_LEF5_C	PF11792.3	gi|289596628|ref|YP_003483324.1|	-	3.3	7.1	8.4	0.2	11.0	0.4	2.9	3	1	1	4	4	4	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
zf-B_box	PF00643.19	gi|289596628|ref|YP_003483324.1|	-	3.9	7.4	9.4	16	5.4	0.1	3.7	3	1	0	3	3	3	0	B-box	zinc	finger
zf-GRF	PF06839.7	gi|289596628|ref|YP_003483324.1|	-	4.1	7.4	6.6	0.43	10.5	0.2	2.4	3	0	0	3	3	2	0	GRF	zinc	finger
Ribosomal_L37ae	PF01780.14	gi|289596628|ref|YP_003483324.1|	-	4.5	7.2	5.3	8.4	6.3	0.1	2.8	2	1	0	2	2	2	0	Ribosomal	L37ae	protein	family
Tnp_zf-ribbon_2	PF13842.1	gi|289596628|ref|YP_003483324.1|	-	6.3	7.2	9.8	23	5.4	0.1	3.5	3	1	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
Trm112p	PF03966.11	gi|289596628|ref|YP_003483324.1|	-	6.4	7.2	7.8	96	3.4	2.5	3.5	2	1	0	2	2	2	0	Trm112p-like	protein
zf-tcix	PF14952.1	gi|289596628|ref|YP_003483324.1|	-	6.5	6.1	14.9	21	4.5	0.1	4.0	4	0	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
NOB1_Zn_bind	PF08772.6	gi|289596628|ref|YP_003483324.1|	-	7	6.5	16.6	17	5.3	0.1	4.1	1	1	3	4	4	4	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF35_N	PF12172.3	gi|289596628|ref|YP_003483324.1|	-	7.3	6.6	14.0	32	4.5	0.2	3.9	3	1	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-Mss51	PF13824.1	gi|289596628|ref|YP_003483324.1|	-	7.4	6.5	14.6	1.5e+04	-4.3	10.1	3.2	1	1	0	1	1	0	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Zn_Tnp_IS91	PF14319.1	gi|289596628|ref|YP_003483324.1|	-	7.8	6.0	12.2	8.1	6.0	0.1	3.8	1	1	2	3	3	3	0	Transposase	zinc-binding	domain
Methyltransf_11	PF08241.7	gi|289596629|ref|YP_003483325.1|	-	2.4e-13	50.3	0.0	3.9e-13	49.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289596629|ref|YP_003483325.1|	-	1.9e-06	27.5	0.0	3.5e-06	26.6	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|289596629|ref|YP_003483325.1|	-	1.4e-05	25.4	0.0	3.9e-05	24.0	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|289596629|ref|YP_003483325.1|	-	9.7e-05	22.1	0.0	0.00012	21.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|289596629|ref|YP_003483325.1|	-	0.00013	22.2	0.0	0.00035	20.8	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289596629|ref|YP_003483325.1|	-	0.00017	20.8	0.0	0.00034	19.7	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.7	gi|289596629|ref|YP_003483325.1|	-	0.00091	18.6	0.0	0.0033	16.8	0.0	1.7	2	0	0	2	2	2	1	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.2	gi|289596629|ref|YP_003483325.1|	-	0.0036	17.8	0.0	0.0095	16.5	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
AAA_12	PF13087.1	gi|289596630|ref|YP_003483326.1|	-	1.7e-63	213.6	0.0	3.7e-63	212.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|289596630|ref|YP_003483326.1|	-	7e-59	199.2	0.0	1.4e-58	198.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|289596630|ref|YP_003483326.1|	-	2.7e-12	46.2	0.0	9.4e-12	44.5	0.1	1.8	2	0	0	2	2	1	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|289596630|ref|YP_003483326.1|	-	1.2e-11	44.5	0.0	1.4e-09	37.8	0.0	2.9	3	1	0	3	3	3	1	AAA	domain
Helicase_RecD	PF05127.9	gi|289596630|ref|YP_003483326.1|	-	7.3e-07	28.9	0.2	0.00013	21.6	0.0	2.3	1	1	0	2	2	2	1	Helicase
Viral_helicase1	PF01443.13	gi|289596630|ref|YP_003483326.1|	-	3.2e-06	26.8	0.0	0.49	9.8	0.0	3.3	2	1	1	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
DEAD	PF00270.24	gi|289596630|ref|YP_003483326.1|	-	1.2e-05	24.9	0.2	4.9e-05	22.8	0.1	2.0	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
UvrD-helicase	PF00580.16	gi|289596630|ref|YP_003483326.1|	-	2.1e-05	23.9	1.0	0.00016	21.0	0.0	2.2	1	1	1	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
PIF1	PF05970.9	gi|289596630|ref|YP_003483326.1|	-	0.00035	19.6	0.1	0.039	12.8	0.0	2.3	2	0	0	2	2	2	1	PIF1-like	helicase
AAA	PF00004.24	gi|289596630|ref|YP_003483326.1|	-	0.00037	20.6	1.1	0.0067	16.6	0.0	3.2	4	0	0	4	4	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|289596630|ref|YP_003483326.1|	-	0.0016	17.4	0.1	0.015	14.2	0.0	2.2	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|289596630|ref|YP_003483326.1|	-	0.0016	18.5	0.1	0.038	14.1	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
UvrD_C_2	PF13538.1	gi|289596630|ref|YP_003483326.1|	-	0.0019	18.3	0.0	0.05	13.7	0.0	2.6	2	0	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
MobB	PF03205.9	gi|289596630|ref|YP_003483326.1|	-	0.0032	17.1	0.2	0.012	15.3	0.0	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|289596630|ref|YP_003483326.1|	-	0.0034	17.3	0.0	0.012	15.6	0.0	1.9	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF2075	PF09848.4	gi|289596630|ref|YP_003483326.1|	-	0.0059	15.6	0.1	0.12	11.3	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|289596630|ref|YP_003483326.1|	-	0.0062	16.3	0.7	0.067	13.0	0.0	2.7	3	0	0	3	3	2	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|289596630|ref|YP_003483326.1|	-	0.0068	15.6	0.0	0.038	13.2	0.0	2.2	2	0	0	2	2	2	1	PhoH-like	protein
IstB_IS21	PF01695.12	gi|289596630|ref|YP_003483326.1|	-	0.0075	15.7	0.0	0.017	14.5	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_10	PF12846.2	gi|289596630|ref|YP_003483326.1|	-	0.0098	15.3	0.0	0.016	14.6	0.0	1.5	1	0	0	1	1	1	1	AAA-like	domain
SRP54	PF00448.17	gi|289596630|ref|YP_003483326.1|	-	0.017	14.6	0.3	0.098	12.0	0.0	2.2	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_25	PF13481.1	gi|289596630|ref|YP_003483326.1|	-	0.023	14.0	0.0	0.078	12.3	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|289596630|ref|YP_003483326.1|	-	0.027	14.6	0.1	3.6	7.8	0.0	3.6	3	1	0	3	3	3	0	RNA	helicase
AAA_5	PF07728.9	gi|289596630|ref|YP_003483326.1|	-	0.028	14.1	0.2	2.8	7.6	0.0	3.1	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|289596630|ref|YP_003483326.1|	-	0.071	12.9	0.2	0.14	12.0	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
UvrD_C	PF13361.1	gi|289596630|ref|YP_003483326.1|	-	0.076	12.4	1.9	0.49	9.7	0.0	2.8	2	1	0	3	3	3	0	UvrD-like	helicase	C-terminal	domain
AAA_17	PF13207.1	gi|289596630|ref|YP_003483326.1|	-	0.13	13.0	0.2	0.13	13.0	0.1	2.8	3	1	0	3	3	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|289596630|ref|YP_003483326.1|	-	0.14	11.2	0.1	1.2	8.2	0.1	2.1	1	1	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|289596630|ref|YP_003483326.1|	-	0.41	10.1	5.8	0.72	9.3	0.1	3.1	2	1	0	3	3	3	0	AAA	domain
AAA_23	PF13476.1	gi|289596630|ref|YP_003483326.1|	-	1.4	9.1	8.5	1.3	9.3	3.3	2.8	2	1	0	2	2	1	0	AAA	domain
RNase_HII	PF01351.13	gi|289596631|ref|YP_003483327.1|	-	2.5e-52	177.4	1.7	2.9e-52	177.2	1.2	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
Tox-PLDMTX	PF15645.1	gi|289596631|ref|YP_003483327.1|	-	0.17	11.9	0.8	0.34	10.9	0.0	1.8	2	0	0	2	2	2	0	Dermonecrotoxin	of	the	Papain-like	fold
Methyltransf_31	PF13847.1	gi|289596632|ref|YP_003483328.1|	-	1.1e-18	67.2	0.1	1.4e-18	66.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289596632|ref|YP_003483328.1|	-	3e-16	59.2	0.1	3.7e-16	58.9	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|289596632|ref|YP_003483328.1|	-	8e-15	55.1	0.0	1.2e-14	54.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289596632|ref|YP_003483328.1|	-	1.1e-14	54.9	0.0	1.8e-14	54.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|289596632|ref|YP_003483328.1|	-	1.3e-14	54.4	0.0	2.7e-14	53.4	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|289596632|ref|YP_003483328.1|	-	8.3e-11	42.1	0.0	1.9e-10	40.9	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|289596632|ref|YP_003483328.1|	-	8.5e-08	32.0	0.0	1.1e-07	31.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Pox_MCEL	PF03291.11	gi|289596632|ref|YP_003483328.1|	-	3.3e-06	26.2	0.4	0.00027	19.9	0.0	2.5	2	1	0	2	2	2	1	mRNA	capping	enzyme
PCMT	PF01135.14	gi|289596632|ref|YP_003483328.1|	-	4.9e-06	26.2	0.0	6.4e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|289596632|ref|YP_003483328.1|	-	1.3e-05	24.6	0.0	1.9e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|289596632|ref|YP_003483328.1|	-	0.00014	21.8	0.0	0.0002	21.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|289596632|ref|YP_003483328.1|	-	0.00069	18.7	0.0	0.0015	17.6	0.0	1.5	2	0	0	2	2	2	1	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|289596632|ref|YP_003483328.1|	-	0.0013	17.6	0.0	0.0018	17.2	0.0	1.1	1	0	0	1	1	1	1	Fibrillarin
RrnaAD	PF00398.15	gi|289596632|ref|YP_003483328.1|	-	0.0014	17.7	0.0	0.0018	17.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
TPMT	PF05724.6	gi|289596632|ref|YP_003483328.1|	-	0.0042	16.5	0.0	0.02	14.3	0.0	1.9	1	1	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
Methyltransf_2	PF00891.13	gi|289596632|ref|YP_003483328.1|	-	0.012	14.8	0.0	0.014	14.5	0.0	1.1	1	0	0	1	1	1	0	O-methyltransferase
FtsJ	PF01728.14	gi|289596632|ref|YP_003483328.1|	-	0.014	15.4	0.0	0.023	14.6	0.0	1.3	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
CheR	PF01739.13	gi|289596632|ref|YP_003483328.1|	-	0.029	13.6	0.0	2.3	7.4	0.0	2.1	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
TehB	PF03848.9	gi|289596632|ref|YP_003483328.1|	-	0.04	13.0	0.0	0.051	12.7	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
DUF43	PF01861.11	gi|289596632|ref|YP_003483328.1|	-	0.053	12.4	0.1	0.083	11.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
Methyltransf_32	PF13679.1	gi|289596632|ref|YP_003483328.1|	-	0.12	12.0	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
TGS	PF02824.16	gi|289596633|ref|YP_003483329.1|	-	3.9e-21	74.6	0.0	8.3e-21	73.5	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
MMR_HSR1	PF01926.18	gi|289596633|ref|YP_003483329.1|	-	6.3e-19	68.0	0.1	2.5e-18	66.1	0.0	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|289596633|ref|YP_003483329.1|	-	4.2e-14	52.1	0.2	6.9e-13	48.1	0.0	2.3	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|289596633|ref|YP_003483329.1|	-	0.006	16.4	0.1	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	Dynamin	family
SRPRB	PF09439.5	gi|289596633|ref|YP_003483329.1|	-	0.013	14.7	0.0	0.013	14.7	0.0	2.0	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
Mg_chelatase	PF01078.16	gi|289596633|ref|YP_003483329.1|	-	0.013	14.6	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
CENP-Q	PF13094.1	gi|289596633|ref|YP_003483329.1|	-	0.015	15.2	2.4	0.028	14.4	1.6	1.4	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
AIG1	PF04548.11	gi|289596633|ref|YP_003483329.1|	-	0.035	13.2	0.5	0.12	11.4	0.0	2.1	3	0	0	3	3	3	0	AIG1	family
GTP_EFTU	PF00009.22	gi|289596633|ref|YP_003483329.1|	-	0.045	13.1	0.1	0.58	9.5	0.0	2.6	2	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
Ead_Ea22	PF13935.1	gi|289596633|ref|YP_003483329.1|	-	0.061	13.6	0.3	0.12	12.7	0.2	1.4	1	0	0	1	1	1	0	Ead/Ea22-like	protein
DUF258	PF03193.11	gi|289596633|ref|YP_003483329.1|	-	0.09	11.9	0.0	0.2	10.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Packaging_FI	PF14000.1	gi|289596633|ref|YP_003483329.1|	-	0.11	12.7	1.9	0.57	10.3	1.3	2.0	1	1	0	1	1	1	0	DNA	packaging	protein	FI
AAA_28	PF13521.1	gi|289596633|ref|YP_003483329.1|	-	0.21	11.5	1.0	0.45	10.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
5_nucleotid	PF05761.9	gi|289596633|ref|YP_003483329.1|	-	0.31	9.5	2.3	0.45	8.9	1.6	1.1	1	0	0	1	1	1	0	5'	nucleotidase	family
MAD	PF05557.8	gi|289596633|ref|YP_003483329.1|	-	0.63	8.0	7.6	0.86	7.6	5.3	1.1	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
DUF1192	PF06698.6	gi|289596633|ref|YP_003483329.1|	-	1.4	8.8	12.6	0.58	9.9	1.8	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Pyr_redox_2	PF07992.9	gi|289596634|ref|YP_003483330.1|	-	8.7e-38	130.2	2.6	1.1e-18	67.8	0.1	3.8	1	1	2	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|289596634|ref|YP_003483330.1|	-	2.2e-24	85.6	1.5	4.9e-21	74.9	0.2	3.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|289596634|ref|YP_003483330.1|	-	1.8e-14	53.4	1.7	1.7e-05	23.9	0.0	3.9	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596634|ref|YP_003483330.1|	-	9.1e-13	48.7	1.2	1.5e-06	28.4	0.4	4.0	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|289596634|ref|YP_003483330.1|	-	1.2e-09	38.0	0.1	1.5e-05	24.9	0.0	3.3	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_dim	PF02852.17	gi|289596634|ref|YP_003483330.1|	-	1.1e-06	28.5	0.3	1.2e-05	25.3	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
HI0933_like	PF03486.9	gi|289596634|ref|YP_003483330.1|	-	3.4e-06	25.7	3.5	0.048	12.1	0.2	3.8	4	1	1	5	5	5	2	HI0933-like	protein
TrkA_N	PF02254.13	gi|289596634|ref|YP_003483330.1|	-	1.3e-05	25.1	0.1	0.019	14.9	0.0	2.6	2	0	0	2	2	2	2	TrkA-N	domain
FAD_binding_2	PF00890.19	gi|289596634|ref|YP_003483330.1|	-	1.5e-05	24.0	0.6	0.006	15.4	0.0	3.8	4	0	0	4	4	4	1	FAD	binding	domain
Thi4	PF01946.12	gi|289596634|ref|YP_003483330.1|	-	2.7e-05	23.3	2.1	0.027	13.5	0.0	3.1	3	0	0	3	3	3	2	Thi4	family
3HCDH_N	PF02737.13	gi|289596634|ref|YP_003483330.1|	-	0.00011	21.8	0.6	0.00022	20.9	0.1	1.7	2	0	0	2	2	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|289596634|ref|YP_003483330.1|	-	0.00011	21.2	0.3	0.11	11.3	0.0	2.5	2	1	1	3	3	3	2	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|289596634|ref|YP_003483330.1|	-	0.00019	21.2	0.1	5.8	6.6	0.0	4.1	3	1	1	4	4	4	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|289596634|ref|YP_003483330.1|	-	0.00068	18.6	0.0	0.0011	17.9	0.0	1.4	1	0	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Cauli_DNA-bind	PF03310.8	gi|289596634|ref|YP_003483330.1|	-	0.00071	19.4	0.2	0.0016	18.2	0.1	1.5	1	0	0	1	1	1	1	Caulimovirus	DNA-binding	protein
ApbA	PF02558.11	gi|289596634|ref|YP_003483330.1|	-	0.00073	19.0	0.0	0.0079	15.6	0.0	2.2	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|289596634|ref|YP_003483330.1|	-	0.00084	18.4	0.1	0.0045	16.1	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|289596634|ref|YP_003483330.1|	-	0.0016	18.6	0.3	0.012	15.8	0.1	2.2	1	1	1	2	2	2	1	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|289596634|ref|YP_003483330.1|	-	0.0033	17.5	4.5	0.0044	17.1	0.8	2.7	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
GIDA	PF01134.17	gi|289596634|ref|YP_003483330.1|	-	0.004	16.0	3.3	0.15	10.9	0.2	3.6	2	1	2	4	4	4	1	Glucose	inhibited	division	protein	A
F420_oxidored	PF03807.12	gi|289596634|ref|YP_003483330.1|	-	0.01	16.2	1.0	2.4	8.6	0.4	3.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.9	gi|289596634|ref|YP_003483330.1|	-	0.012	15.0	0.3	0.06	12.7	0.1	2.3	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ThiF	PF00899.16	gi|289596634|ref|YP_003483330.1|	-	0.013	15.3	0.4	0.5	10.1	0.1	2.8	3	0	0	3	3	3	0	ThiF	family
2-Hacid_dh_C	PF02826.14	gi|289596634|ref|YP_003483330.1|	-	0.028	13.5	1.6	0.051	12.7	0.1	2.1	2	1	1	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Trp_halogenase	PF04820.9	gi|289596634|ref|YP_003483330.1|	-	0.046	12.3	0.1	2	6.9	0.0	2.3	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_2	PF03446.10	gi|289596634|ref|YP_003483330.1|	-	0.046	13.5	0.1	0.11	12.3	0.1	1.7	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|289596634|ref|YP_003483330.1|	-	0.052	14.0	0.7	2.7	8.5	0.0	3.3	3	1	1	4	4	3	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CPSase_L_chain	PF00289.17	gi|289596634|ref|YP_003483330.1|	-	0.054	13.5	0.0	0.15	12.2	0.0	1.8	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
NAD_binding_10	PF13460.1	gi|289596634|ref|YP_003483330.1|	-	0.086	12.8	0.0	0.19	11.7	0.0	1.5	1	0	0	1	1	1	0	NADH(P)-binding
Clat_adaptor_s	PF01217.15	gi|289596635|ref|YP_003483331.1|	-	0.028	14.1	1.4	0.032	13.9	1.0	1.2	1	0	0	1	1	1	0	Clathrin	adaptor	complex	small	chain
z-alpha	PF02295.12	gi|289596635|ref|YP_003483331.1|	-	0.15	11.8	0.2	0.21	11.4	0.1	1.2	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
AF0941-like	PF14591.1	gi|289596635|ref|YP_003483331.1|	-	0.19	11.8	4.6	0.29	11.2	3.2	1.3	1	1	0	1	1	1	0	AF0941-like
Hexapep	PF00132.19	gi|289596636|ref|YP_003483332.1|	-	5.5e-22	76.2	24.9	9.9e-09	34.3	6.6	4.2	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|289596636|ref|YP_003483332.1|	-	6e-09	35.3	20.8	1.5e-06	27.6	5.4	3.9	3	2	1	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
Thi4	PF01946.12	gi|289596638|ref|YP_003483334.1|	-	6.4e-85	283.9	1.3	7.4e-85	283.6	0.9	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|289596638|ref|YP_003483334.1|	-	1.8e-12	46.8	0.6	1.8e-07	30.3	0.4	2.1	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|289596638|ref|YP_003483334.1|	-	2.8e-10	40.0	0.1	7.4e-10	38.7	0.1	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|289596638|ref|YP_003483334.1|	-	4e-07	29.4	0.1	7.4e-07	28.5	0.0	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|289596638|ref|YP_003483334.1|	-	7.7e-07	28.2	0.6	5.1e-05	22.2	0.3	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|289596638|ref|YP_003483334.1|	-	1.4e-06	28.4	0.3	5.8e-06	26.5	0.2	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|289596638|ref|YP_003483334.1|	-	3.5e-06	27.0	0.9	5e-06	26.5	0.4	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|289596638|ref|YP_003483334.1|	-	9.6e-06	24.3	0.1	1.1e-05	24.0	0.1	1.2	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|289596638|ref|YP_003483334.1|	-	3.8e-05	22.9	0.0	0.00046	19.3	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|289596638|ref|YP_003483334.1|	-	0.00034	20.4	0.1	0.00077	19.2	0.0	1.7	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|289596638|ref|YP_003483334.1|	-	0.00055	20.2	0.4	0.005	17.2	0.1	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|289596638|ref|YP_003483334.1|	-	0.0034	16.3	0.6	0.0082	15.0	0.1	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Trp_halogenase	PF04820.9	gi|289596638|ref|YP_003483334.1|	-	0.013	14.1	0.1	0.22	10.1	0.1	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|289596638|ref|YP_003483334.1|	-	0.015	14.2	0.1	0.043	12.7	0.1	1.8	1	1	0	1	1	1	0	Lycopene	cyclase	protein
Amino_oxidase	PF01593.19	gi|289596638|ref|YP_003483334.1|	-	0.03	13.4	0.0	0.066	12.2	0.0	1.5	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|289596638|ref|YP_003483334.1|	-	0.046	13.4	0.2	0.12	12.1	0.1	1.7	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
K_oxygenase	PF13434.1	gi|289596638|ref|YP_003483334.1|	-	0.047	12.6	0.0	0.068	12.0	0.0	1.2	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Shikimate_DH	PF01488.15	gi|289596638|ref|YP_003483334.1|	-	0.096	12.7	0.0	0.33	11.0	0.0	1.9	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.11	gi|289596638|ref|YP_003483334.1|	-	0.16	11.4	0.4	0.37	10.2	0.0	1.8	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
Tubulin	PF00091.20	gi|289596639|ref|YP_003483335.1|	-	3.5e-35	121.7	0.1	8.9e-35	120.4	0.1	1.6	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|289596639|ref|YP_003483335.1|	-	1.1e-30	105.4	2.9	1.6e-30	105.0	0.6	2.3	2	0	0	2	2	2	1	FtsZ	family,	C-terminal	domain
ADH_zinc_N	PF00107.21	gi|289596639|ref|YP_003483335.1|	-	0.011	15.2	0.4	3.3	7.2	0.1	3.6	3	1	0	3	3	3	0	Zinc-binding	dehydrogenase
SIS_2	PF13580.1	gi|289596639|ref|YP_003483335.1|	-	0.014	15.0	1.3	2.8	7.6	0.3	3.2	2	1	0	2	2	2	0	SIS	domain
ThiF	PF00899.16	gi|289596639|ref|YP_003483335.1|	-	0.077	12.8	0.2	0.23	11.2	0.1	1.9	1	0	0	1	1	1	0	ThiF	family
DUF4102	PF13356.1	gi|289596639|ref|YP_003483335.1|	-	0.11	12.3	0.3	4.1	7.3	0.1	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4102)
Tubulin_2	PF13809.1	gi|289596639|ref|YP_003483335.1|	-	4	6.2	6.1	0.6	9.0	1.3	1.7	1	1	0	2	2	2	0	Tubulin	like
DUF973	PF06157.6	gi|289596640|ref|YP_003483336.1|	-	6e-19	68.0	13.7	7.2e-19	67.8	9.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|289596640|ref|YP_003483336.1|	-	5e-08	33.0	15.8	0.00015	21.7	2.3	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF996)
DUF1469	PF07332.6	gi|289596640|ref|YP_003483336.1|	-	0.018	14.7	7.1	0.098	12.3	0.0	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF3180	PF11377.3	gi|289596640|ref|YP_003483336.1|	-	0.066	13.0	1.4	0.61	9.9	0.0	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3180)
7TM_GPCR_Srab	PF10292.4	gi|289596640|ref|YP_003483336.1|	-	0.44	9.1	3.2	0.32	9.6	0.3	2.0	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	receptor	class	ab	chemoreceptor
Pho88	PF10032.4	gi|289596640|ref|YP_003483336.1|	-	0.73	9.0	2.7	1.1	8.4	0.0	2.3	2	1	1	3	3	3	0	Phosphate	transport	(Pho88)
DUF975	PF06161.6	gi|289596640|ref|YP_003483336.1|	-	0.79	9.4	16.7	0.079	12.6	4.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF975)
DUF3366	PF11846.3	gi|289596640|ref|YP_003483336.1|	-	1.4	8.7	3.9	8.5	6.1	0.1	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3366)
RtcB	PF01139.12	gi|289596641|ref|YP_003483337.1|	-	3.9e-158	526.8	0.2	4.5e-158	526.6	0.2	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
MFS_1	PF07690.11	gi|289596642|ref|YP_003483338.1|	-	1.1e-13	50.6	26.6	1.1e-13	50.6	18.5	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
CbtB	PF09489.5	gi|289596642|ref|YP_003483338.1|	-	0.89	9.5	2.9	4	7.4	0.1	3.1	3	0	0	3	3	3	0	Probable	cobalt	transporter	subunit	(CbtB)
ACP	PF06857.6	gi|289596643|ref|YP_003483339.1|	-	2e-13	50.0	0.1	2.4e-13	49.7	0.1	1.1	1	0	0	1	1	1	1	Malonate	decarboxylase	delta	subunit	(MdcD)
HpcH_HpaI	PF03328.9	gi|289596644|ref|YP_003483340.1|	-	9.6e-49	165.2	0.0	1.9e-48	164.2	0.0	1.5	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|289596644|ref|YP_003483340.1|	-	1.9e-13	50.0	0.0	6.1e-10	38.4	0.0	2.7	1	1	0	1	1	1	1	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
CitF	PF04223.7	gi|289596645|ref|YP_003483341.1|	-	5.7e-166	552.7	3.2	6.6e-166	552.5	2.3	1.0	1	0	0	1	1	1	1	Citrate	lyase,	alpha	subunit	(CitF)
AcetylCoA_hyd_C	PF13336.1	gi|289596645|ref|YP_003483341.1|	-	7.5e-05	22.4	0.1	0.00017	21.3	0.0	1.5	1	0	0	1	1	1	1	Acetyl-CoA	hydrolase/transferase	C-terminal	domain
SAM_1	PF00536.25	gi|289596645|ref|YP_003483341.1|	-	0.14	12.3	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	SAM	domain	(Sterile	alpha	motif)
TBP	PF00352.16	gi|289596646|ref|YP_003483342.1|	-	2.1e-66	219.2	0.2	4.6e-33	112.4	0.1	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|289596646|ref|YP_003483342.1|	-	0.00021	21.2	0.0	0.88	9.6	0.0	2.8	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF3378)
CENP-F_C_Rb_bdg	PF10490.4	gi|289596646|ref|YP_003483342.1|	-	0.035	13.4	0.2	5.9	6.2	0.0	2.3	2	0	0	2	2	2	0	Rb-binding	domain	of	kinetochore	protein	Cenp-F/LEK1
DUF3552	PF12072.3	gi|289596647|ref|YP_003483343.1|	-	1.2e-05	24.5	86.7	0.00073	18.8	8.1	4.2	1	1	3	4	4	4	3	Domain	of	unknown	function	(DUF3552)
AAA_13	PF13166.1	gi|289596647|ref|YP_003483343.1|	-	0.0016	16.9	39.4	0.0016	16.9	27.3	2.5	1	1	1	2	2	2	1	AAA	domain
APG6	PF04111.7	gi|289596647|ref|YP_003483343.1|	-	0.0027	16.8	18.7	0.0027	16.8	12.9	3.4	1	1	1	3	3	3	1	Autophagy	protein	Apg6
MCPsignal	PF00015.16	gi|289596647|ref|YP_003483343.1|	-	0.0069	15.9	7.2	0.0069	15.9	5.0	2.8	2	1	0	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Reo_sigmaC	PF04582.7	gi|289596647|ref|YP_003483343.1|	-	0.012	14.8	8.2	0.35	10.0	2.2	2.5	1	1	2	3	3	3	0	Reovirus	sigma	C	capsid	protein
DUF4200	PF13863.1	gi|289596647|ref|YP_003483343.1|	-	0.017	15.1	92.8	0.035	14.0	17.0	5.4	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4200)
DUF3584	PF12128.3	gi|289596647|ref|YP_003483343.1|	-	0.067	10.5	56.4	0.33	8.2	24.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
DUF948	PF06103.6	gi|289596647|ref|YP_003483343.1|	-	0.15	11.9	29.5	0.23	11.3	1.2	4.5	2	2	1	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
Baculo_PEP_C	PF04513.7	gi|289596647|ref|YP_003483343.1|	-	0.25	11.1	15.4	8	6.2	3.2	4.0	2	2	1	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
LXG	PF04740.7	gi|289596647|ref|YP_003483343.1|	-	0.28	10.9	47.3	0.033	13.9	12.7	4.2	2	2	1	3	3	3	0	LXG	domain	of	WXG	superfamily
Spc7	PF08317.6	gi|289596647|ref|YP_003483343.1|	-	0.64	8.6	72.9	2.3	6.7	23.0	3.3	1	1	2	3	3	3	0	Spc7	kinetochore	protein
IncA	PF04156.9	gi|289596647|ref|YP_003483343.1|	-	1.1	8.8	73.2	0.034	13.7	18.4	3.9	1	1	3	4	4	3	0	IncA	protein
DUF479	PF04336.7	gi|289596647|ref|YP_003483343.1|	-	2.2	8.4	11.3	0.81	9.8	0.1	3.9	2	2	1	4	4	4	0	Protein	of	unknown	function,	DUF479
Fib_alpha	PF08702.5	gi|289596647|ref|YP_003483343.1|	-	3.3	7.8	47.5	4.5	7.3	10.7	3.6	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
AAA_27	PF13514.1	gi|289596647|ref|YP_003483343.1|	-	3.5	5.1	47.6	14	3.2	33.0	1.7	1	1	0	1	1	1	0	AAA	domain
V_ATPase_I	PF01496.14	gi|289596647|ref|YP_003483343.1|	-	4	5.1	59.1	0.46	8.2	10.5	3.1	1	1	2	3	3	3	0	V-type	ATPase	116kDa	subunit	family
Fmp27_WPPW	PF10359.4	gi|289596647|ref|YP_003483343.1|	-	4.4	5.6	53.4	0.08	11.3	7.9	3.7	1	1	2	3	3	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
BLOC1_2	PF10046.4	gi|289596647|ref|YP_003483343.1|	-	5.5	7.1	52.3	0.059	13.5	4.1	4.6	1	1	4	5	5	5	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Laminin_I	PF06008.9	gi|289596647|ref|YP_003483343.1|	-	7.1	5.8	53.8	1	8.5	8.8	3.1	1	1	2	3	3	3	0	Laminin	Domain	I
Prefoldin	PF02996.12	gi|289596647|ref|YP_003483343.1|	-	7.6	6.2	59.4	0.24	11.0	1.7	6.6	2	2	4	7	7	7	0	Prefoldin	subunit
Baculo_PEP_C	PF04513.7	gi|289596648|ref|YP_003483344.1|	-	6e-05	22.8	6.8	0.0096	15.7	3.7	2.1	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
NPV_P10	PF05531.7	gi|289596648|ref|YP_003483344.1|	-	0.00063	19.9	11.2	0.007	16.5	3.6	2.2	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
MAP65_ASE1	PF03999.7	gi|289596648|ref|YP_003483344.1|	-	0.0009	17.9	6.9	0.001	17.8	4.8	1.0	1	0	0	1	1	1	1	Microtubule	associated	protein	(MAP65/ASE1	family)
Vip3A_N	PF12495.3	gi|289596648|ref|YP_003483344.1|	-	0.0014	18.3	6.6	0.0092	15.6	0.7	2.1	1	1	1	2	2	2	1	Vegetative	insecticide	protein	3A	N	terminal
Leu_zip	PF15294.1	gi|289596648|ref|YP_003483344.1|	-	0.004	16.3	6.6	0.0044	16.1	4.6	1.1	1	0	0	1	1	1	1	Leucine	zipper
DUF812	PF05667.6	gi|289596648|ref|YP_003483344.1|	-	0.0043	15.6	5.9	0.005	15.4	4.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
Seryl_tRNA_N	PF02403.17	gi|289596648|ref|YP_003483344.1|	-	0.0053	16.7	10.4	0.012	15.6	2.4	2.1	1	1	1	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
AAA_13	PF13166.1	gi|289596648|ref|YP_003483344.1|	-	0.0054	15.2	8.4	0.0063	15.0	5.8	1.0	1	0	0	1	1	1	1	AAA	domain
MCPsignal	PF00015.16	gi|289596648|ref|YP_003483344.1|	-	0.006	16.1	0.7	0.0066	16.0	0.5	1.1	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
BLOC1_2	PF10046.4	gi|289596648|ref|YP_003483344.1|	-	0.0062	16.6	12.2	0.26	11.4	0.5	2.2	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
LOH1CR12	PF10158.4	gi|289596648|ref|YP_003483344.1|	-	0.014	15.1	3.6	0.073	12.8	2.5	1.9	1	1	0	1	1	1	0	Tumour	suppressor	protein
Laminin_II	PF06009.7	gi|289596648|ref|YP_003483344.1|	-	0.018	14.8	7.4	0.033	13.9	4.8	1.6	1	1	0	1	1	1	0	Laminin	Domain	II
HD_3	PF13023.1	gi|289596648|ref|YP_003483344.1|	-	0.022	14.4	0.8	0.027	14.2	0.6	1.2	1	0	0	1	1	1	0	HD	domain
PSII_Pbs27	PF13326.1	gi|289596648|ref|YP_003483344.1|	-	0.026	14.4	0.4	0.033	14.1	0.2	1.2	1	1	0	1	1	1	0	Photosystem	II	Pbs27
CK2S	PF15011.1	gi|289596648|ref|YP_003483344.1|	-	0.05	13.3	1.1	0.072	12.8	0.8	1.3	1	1	0	1	1	1	0	Casein	Kinase	2	substrate
FliG_M	PF14841.1	gi|289596648|ref|YP_003483344.1|	-	0.051	13.5	1.9	0.27	11.2	0.0	2.3	2	0	0	2	2	2	0	FliG	middle	domain
PTPA	PF03095.10	gi|289596648|ref|YP_003483344.1|	-	0.053	12.6	0.8	0.067	12.3	0.5	1.0	1	0	0	1	1	1	0	Phosphotyrosyl	phosphate	activator	(PTPA)	protein
Matrilin_ccoil	PF10393.4	gi|289596648|ref|YP_003483344.1|	-	0.057	12.7	8.0	0.33	10.3	0.2	3.4	2	2	1	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Nsp1_C	PF05064.8	gi|289596648|ref|YP_003483344.1|	-	0.058	13.0	7.1	0.11	12.1	1.7	2.2	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
Reo_sigmaC	PF04582.7	gi|289596648|ref|YP_003483344.1|	-	0.061	12.4	1.6	0.087	11.9	1.1	1.3	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
FliD_C	PF07195.7	gi|289596648|ref|YP_003483344.1|	-	0.069	12.4	7.8	0.11	11.8	0.4	2.1	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
DASH_Dam1	PF08653.5	gi|289596648|ref|YP_003483344.1|	-	0.076	12.7	3.4	1.2	8.9	0.1	3.0	1	1	3	4	4	4	0	DASH	complex	subunit	Dam1
UME	PF08064.8	gi|289596648|ref|YP_003483344.1|	-	0.078	12.9	1.1	0.23	11.4	0.8	2.1	1	1	0	1	1	1	0	UME	(NUC010)	domain
DUF972	PF06156.8	gi|289596648|ref|YP_003483344.1|	-	0.08	13.2	5.8	0.15	12.3	3.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
COG2	PF06148.6	gi|289596648|ref|YP_003483344.1|	-	0.087	12.7	7.4	1	9.2	1.0	2.8	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF601	PF04642.7	gi|289596648|ref|YP_003483344.1|	-	0.098	12.0	4.1	0.11	11.8	2.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF601
Prominin	PF05478.6	gi|289596648|ref|YP_003483344.1|	-	0.099	10.1	2.0	0.14	9.6	1.4	1.3	1	0	0	1	1	1	0	Prominin
DUF4041	PF13250.1	gi|289596648|ref|YP_003483344.1|	-	0.11	12.0	6.2	3.9	7.1	0.1	3.3	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF4041)
MtrB	PF05440.7	gi|289596648|ref|YP_003483344.1|	-	0.11	12.4	1.5	4.1	7.5	0.1	2.1	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
Baculo_p24	PF05073.7	gi|289596648|ref|YP_003483344.1|	-	0.12	11.9	6.5	0.34	10.4	4.5	1.7	1	1	0	1	1	1	0	Baculovirus	P24	capsid	protein
Syntaxin-6_N	PF09177.6	gi|289596648|ref|YP_003483344.1|	-	0.12	12.7	8.3	0.75	10.2	1.7	2.6	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
MitMem_reg	PF13012.1	gi|289596648|ref|YP_003483344.1|	-	0.14	12.2	4.1	1.3	9.1	2.6	2.1	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
Sec34	PF04136.10	gi|289596648|ref|YP_003483344.1|	-	0.15	11.7	4.6	0.2	11.3	3.2	1.3	1	0	0	1	1	1	0	Sec34-like	family
AKNA	PF12443.3	gi|289596648|ref|YP_003483344.1|	-	0.16	12.0	2.6	0.2	11.7	0.9	1.8	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
Noelin-1	PF12308.3	gi|289596648|ref|YP_003483344.1|	-	0.17	11.6	4.8	0.48	10.2	0.7	2.2	1	1	1	2	2	2	0	Neurogenesis	glycoprotein
Tropomyosin	PF00261.15	gi|289596648|ref|YP_003483344.1|	-	0.2	10.7	9.9	0.43	9.6	0.5	2.1	1	1	0	2	2	2	0	Tropomyosin
Spc7	PF08317.6	gi|289596648|ref|YP_003483344.1|	-	0.22	10.1	10.4	0.26	9.8	7.2	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
TBPIP	PF07106.8	gi|289596648|ref|YP_003483344.1|	-	0.23	11.0	11.2	3.5	7.1	2.6	2.1	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HbrB	PF08539.6	gi|289596648|ref|YP_003483344.1|	-	0.23	11.3	4.4	1.2	8.9	1.7	2.1	1	1	1	2	2	2	0	HbrB-like
Allexi_40kDa	PF05549.6	gi|289596648|ref|YP_003483344.1|	-	0.25	10.5	5.7	3.4	6.8	2.0	2.0	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
V_ATPase_I	PF01496.14	gi|289596648|ref|YP_003483344.1|	-	0.27	9.0	4.7	0.49	8.1	3.3	1.5	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2450	PF10475.4	gi|289596648|ref|YP_003483344.1|	-	0.32	9.8	6.1	0.91	8.3	4.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
Uds1	PF15456.1	gi|289596648|ref|YP_003483344.1|	-	0.36	10.8	2.8	0.9	9.5	1.9	1.7	1	1	0	1	1	1	0	Up-regulated	During	Septation
Snapin_Pallidin	PF14712.1	gi|289596648|ref|YP_003483344.1|	-	0.37	11.1	7.6	4.6	7.6	2.5	2.3	1	1	1	2	2	2	0	Snapin/Pallidin
DivIC	PF04977.10	gi|289596648|ref|YP_003483344.1|	-	0.38	10.2	9.1	0.48	9.9	2.9	2.1	2	0	0	2	2	2	0	Septum	formation	initiator
DUF4559	PF15112.1	gi|289596648|ref|YP_003483344.1|	-	0.38	9.8	5.2	0.48	9.5	3.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
Spore_IV_A	PF09547.5	gi|289596648|ref|YP_003483344.1|	-	0.4	9.3	4.2	0.94	8.1	2.9	1.5	1	1	0	1	1	1	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
LXG	PF04740.7	gi|289596648|ref|YP_003483344.1|	-	0.41	10.3	10.9	0.33	10.7	3.5	2.0	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
DUF4446	PF14584.1	gi|289596648|ref|YP_003483344.1|	-	0.51	10.1	5.4	4.1	7.2	0.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF651	PF04895.7	gi|289596648|ref|YP_003483344.1|	-	0.52	9.9	2.6	7.9	6.1	0.1	2.3	1	1	1	2	2	2	0	Archaeal	protein	of	unknown	function	(DUF651)
DUF3552	PF12072.3	gi|289596648|ref|YP_003483344.1|	-	0.52	9.5	6.8	1.1	8.4	4.8	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
CDC37_N	PF03234.9	gi|289596648|ref|YP_003483344.1|	-	0.58	10.4	7.7	1.9	8.7	5.4	1.7	1	1	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
Phage_GPO	PF05929.6	gi|289596648|ref|YP_003483344.1|	-	0.59	9.3	2.7	0.86	8.7	1.9	1.4	1	1	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
DUF2762	PF10960.3	gi|289596648|ref|YP_003483344.1|	-	0.59	9.8	8.5	3.3	7.4	2.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2762)
DivIVA	PF05103.8	gi|289596648|ref|YP_003483344.1|	-	0.65	10.0	5.8	1.2	9.1	4.0	1.5	1	1	0	1	1	1	0	DivIVA	protein
Phage_Mu_Gam	PF07352.7	gi|289596648|ref|YP_003483344.1|	-	0.76	9.2	8.3	3.7	7.0	0.1	2.2	1	1	1	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
DUF1664	PF07889.7	gi|289596648|ref|YP_003483344.1|	-	0.78	9.5	9.4	4.7	7.0	2.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Fib_alpha	PF08702.5	gi|289596648|ref|YP_003483344.1|	-	0.79	9.8	7.8	4.3	7.4	5.4	2.0	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Dor1	PF04124.7	gi|289596648|ref|YP_003483344.1|	-	0.79	8.1	8.2	1.2	7.4	5.7	1.3	1	1	0	1	1	1	0	Dor1-like	family
Hormone_1	PF00103.15	gi|289596648|ref|YP_003483344.1|	-	0.93	8.7	5.6	5.3	6.3	0.4	2.1	1	1	1	2	2	2	0	Somatotropin	hormone	family
Med2	PF11214.3	gi|289596648|ref|YP_003483344.1|	-	1.1	9.3	7.9	1.9	8.5	5.5	1.5	1	1	0	1	1	1	0	Mediator	complex	subunit	2
DUF948	PF06103.6	gi|289596648|ref|YP_003483344.1|	-	1.4	8.8	6.5	1.5	8.7	1.5	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Phasin	PF05597.6	gi|289596648|ref|YP_003483344.1|	-	1.7	8.4	5.3	2.8	7.6	1.0	2.2	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF4164	PF13747.1	gi|289596648|ref|YP_003483344.1|	-	2.1	8.5	7.4	1.5	9.0	0.5	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4164)
MtrG	PF04210.8	gi|289596648|ref|YP_003483344.1|	-	2.4	7.9	7.1	17	5.1	0.1	3.0	2	2	1	3	3	3	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
Merozoite_SPAM	PF07133.6	gi|289596648|ref|YP_003483344.1|	-	2.4	8.0	10.9	3	7.7	7.6	1.1	1	0	0	1	1	1	0	Merozoite	surface	protein	(SPAM)
DUF16	PF01519.11	gi|289596648|ref|YP_003483344.1|	-	2.4	8.4	11.0	74	3.6	7.7	2.5	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
Prefoldin	PF02996.12	gi|289596648|ref|YP_003483344.1|	-	2.5	7.7	9.9	8	6.1	2.0	3.0	1	1	1	3	3	3	0	Prefoldin	subunit
NEP	PF10167.4	gi|289596648|ref|YP_003483344.1|	-	3.3	7.4	6.9	17	5.1	0.2	2.1	1	1	1	2	2	2	0	Uncharacterised	conserved	protein
Synaptobrevin	PF00957.16	gi|289596648|ref|YP_003483344.1|	-	3.3	7.3	7.4	4.9	6.8	0.2	2.2	2	0	0	2	2	2	0	Synaptobrevin
DASH_Dad3	PF08656.5	gi|289596648|ref|YP_003483344.1|	-	3.4	7.4	6.8	29	4.4	4.7	2.2	1	1	0	1	1	1	0	DASH	complex	subunit	Dad3
DUF342	PF03961.8	gi|289596648|ref|YP_003483344.1|	-	3.6	5.9	8.6	8.9	4.6	6.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
FlaC_arch	PF05377.6	gi|289596648|ref|YP_003483344.1|	-	3.9	7.4	10.1	12	5.9	2.7	3.2	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Syntaxin	PF00804.20	gi|289596648|ref|YP_003483344.1|	-	3.9	7.6	13.5	12	6.1	9.4	1.8	1	1	0	1	1	1	0	Syntaxin
ORF6C	PF10552.4	gi|289596648|ref|YP_003483344.1|	-	4.7	6.9	7.8	3.8	7.2	2.8	2.4	1	1	1	2	2	2	0	ORF6C	domain
PCRF	PF03462.13	gi|289596648|ref|YP_003483344.1|	-	5.2	6.8	5.4	9.7	5.9	0.4	2.5	2	1	1	3	3	3	0	PCRF	domain
IncA	PF04156.9	gi|289596648|ref|YP_003483344.1|	-	5.2	6.6	10.8	17	4.9	7.5	1.7	1	1	0	1	1	1	0	IncA	protein
EMP24_GP25L	PF01105.19	gi|289596648|ref|YP_003483344.1|	-	5.4	6.6	8.7	12	5.5	1.3	2.3	1	1	1	2	2	2	0	emp24/gp25L/p24	family/GOLD
DUF2664	PF10867.3	gi|289596648|ref|YP_003483344.1|	-	5.7	7.6	6.2	4.5	7.9	0.9	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2664)
Cauli_DNA-bind	PF03310.8	gi|289596648|ref|YP_003483344.1|	-	5.7	6.8	8.2	55	3.6	5.6	2.1	1	1	0	1	1	1	0	Caulimovirus	DNA-binding	protein
Lipoprotein_20	PF13942.1	gi|289596648|ref|YP_003483344.1|	-	5.7	6.4	8.3	2	7.8	0.4	2.2	1	1	1	2	2	2	0	YfhG	lipoprotein
CorA	PF01544.13	gi|289596648|ref|YP_003483344.1|	-	6.7	5.6	8.3	11	4.9	5.7	1.5	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Med4	PF10018.4	gi|289596648|ref|YP_003483344.1|	-	6.7	6.0	9.0	7.9	5.8	2.1	2.2	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
MerR-DNA-bind	PF09278.6	gi|289596648|ref|YP_003483344.1|	-	7.5	7.0	7.6	7.9	6.9	2.1	2.8	2	2	0	2	2	2	0	MerR,	DNA	binding
EB1	PF03271.12	gi|289596648|ref|YP_003483344.1|	-	8.1	6.5	9.6	7.1	6.7	4.2	2.6	2	1	0	2	2	1	0	EB1-like	C-terminal	motif
Fijivirus_P9-2	PF06837.6	gi|289596648|ref|YP_003483344.1|	-	8.6	5.4	7.4	3.7	6.6	1.4	2.1	1	1	1	2	2	2	0	Fijivirus	P9-2	protein
Asparaginase_2	PF01112.13	gi|289596649|ref|YP_003483345.1|	-	4.6e-55	186.5	0.0	6.1e-55	186.1	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
Fer4_8	PF13183.1	gi|289596650|ref|YP_003483346.1|	-	8.8e-10	38.4	4.8	1.5e-09	37.7	3.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289596650|ref|YP_003483346.1|	-	2e-09	37.6	15.3	5.1e-07	29.9	4.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596650|ref|YP_003483346.1|	-	9.5e-07	28.9	5.4	2.3e-06	27.7	3.8	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289596650|ref|YP_003483346.1|	-	1.6e-06	28.4	4.4	0.0091	16.4	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596650|ref|YP_003483346.1|	-	0.00045	19.9	9.7	0.018	14.8	8.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596650|ref|YP_003483346.1|	-	0.0019	18.8	5.3	0.45	11.2	1.0	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|289596650|ref|YP_003483346.1|	-	0.0051	16.6	10.4	0.046	13.6	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596650|ref|YP_003483346.1|	-	0.014	15.7	11.9	0.11	12.9	1.9	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596650|ref|YP_003483346.1|	-	0.015	15.1	1.9	0.015	15.1	1.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|289596650|ref|YP_003483346.1|	-	0.028	14.0	4.9	0.19	11.3	0.1	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.2	gi|289596650|ref|YP_003483346.1|	-	0.16	12.3	11.3	0.49	10.8	2.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596650|ref|YP_003483346.1|	-	0.17	11.7	11.0	0.94	9.3	1.1	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Molybdop_Fe4S4	PF04879.11	gi|289596650|ref|YP_003483346.1|	-	2.2	8.1	6.3	4.5	7.1	0.1	2.3	2	0	0	2	2	2	0	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_3	PF12798.2	gi|289596650|ref|YP_003483346.1|	-	3.6	8.3	17.3	2.9	8.6	3.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CCG	PF02754.11	gi|289596651|ref|YP_003483347.1|	-	1.3e-24	85.9	0.2	2.6e-13	49.7	0.0	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Pyr_redox_2	PF07992.9	gi|289596652|ref|YP_003483348.1|	-	1.9e-39	135.6	0.2	2.4e-24	86.3	0.0	5.9	3	2	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596652|ref|YP_003483348.1|	-	1.3e-24	87.4	3.1	6.2e-10	39.4	0.0	5.0	4	1	1	5	5	5	3	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_20	PF14691.1	gi|289596652|ref|YP_003483348.1|	-	4e-21	74.7	1.3	1.4e-18	66.5	0.0	4.8	4	1	1	5	5	5	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
NAD_binding_8	PF13450.1	gi|289596652|ref|YP_003483348.1|	-	5.6e-17	61.5	1.0	4.8e-08	32.9	0.0	3.3	3	0	0	3	3	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|289596652|ref|YP_003483348.1|	-	2.7e-16	59.7	12.3	8.9e-06	26.0	0.1	4.9	4	1	0	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.22	gi|289596652|ref|YP_003483348.1|	-	6e-16	57.2	48.1	3.5e-07	29.5	3.3	5.8	4	1	1	5	5	5	4	4Fe-4S	binding	domain
NAD_binding_7	PF13241.1	gi|289596652|ref|YP_003483348.1|	-	3.5e-15	56.1	0.7	0.0002	21.5	0.0	4.7	4	0	0	4	4	4	3	Putative	NAD(P)-binding
GIDA	PF01134.17	gi|289596652|ref|YP_003483348.1|	-	8.3e-15	54.5	9.8	0.0006	18.7	0.0	5.6	6	0	0	6	6	6	4	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|289596652|ref|YP_003483348.1|	-	5.2e-14	51.9	14.4	5.2e-05	22.3	0.4	4.3	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|289596652|ref|YP_003483348.1|	-	8.6e-14	51.4	3.5	0.00038	20.0	0.1	3.7	3	1	0	3	3	3	3	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_2	PF00890.19	gi|289596652|ref|YP_003483348.1|	-	9.7e-14	51.0	14.1	3e-07	29.6	0.5	3.7	4	0	0	4	4	4	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|289596652|ref|YP_003483348.1|	-	7.6e-13	48.3	13.1	6.8e-06	25.4	0.5	4.3	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
Fer4_7	PF12838.2	gi|289596652|ref|YP_003483348.1|	-	2.2e-12	47.1	48.6	4.6e-07	30.1	9.5	6.0	5	2	1	6	6	5	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596652|ref|YP_003483348.1|	-	5e-11	42.2	32.3	2.3e-07	30.5	7.8	4.5	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
HI0933_like	PF03486.9	gi|289596652|ref|YP_003483348.1|	-	2e-10	39.7	10.5	1.8e-06	26.6	0.7	3.5	3	0	0	3	3	3	2	HI0933-like	protein
Fer4_10	PF13237.1	gi|289596652|ref|YP_003483348.1|	-	1.3e-09	37.6	42.4	7.5e-06	25.6	7.1	5.4	3	2	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596652|ref|YP_003483348.1|	-	4.1e-09	37.0	35.9	0.005	17.5	0.5	6.0	5	2	1	6	6	6	4	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|289596652|ref|YP_003483348.1|	-	5.3e-09	35.9	33.6	0.0013	18.7	0.2	5.3	4	1	1	5	5	5	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596652|ref|YP_003483348.1|	-	1e-08	35.3	51.9	4.4e-07	30.0	8.6	5.5	6	1	0	6	6	4	2	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.14	gi|289596652|ref|YP_003483348.1|	-	1.6e-08	34.0	6.4	0.00059	18.9	0.5	2.9	4	0	0	4	4	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|289596652|ref|YP_003483348.1|	-	3.2e-08	32.9	1.6	0.008	15.2	0.0	3.2	3	0	0	3	3	3	2	Thi4	family
Shikimate_DH	PF01488.15	gi|289596652|ref|YP_003483348.1|	-	8e-08	32.4	3.4	0.22	11.5	0.0	4.5	4	0	0	4	4	3	3	Shikimate	/	quinate	5-dehydrogenase
CPSase_L_chain	PF00289.17	gi|289596652|ref|YP_003483348.1|	-	1.2e-07	31.8	0.1	0.32	11.0	0.0	3.8	3	0	0	3	3	3	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Fer4_6	PF12837.2	gi|289596652|ref|YP_003483348.1|	-	1.7e-07	30.8	54.2	8.6e-05	22.2	1.5	6.5	6	1	0	6	6	4	3	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596652|ref|YP_003483348.1|	-	1.8e-07	31.3	32.3	0.0052	17.1	0.3	6.7	7	1	1	8	8	6	3	4Fe-4S	dicluster	domain
2-Hacid_dh_C	PF02826.14	gi|289596652|ref|YP_003483348.1|	-	2.1e-07	30.2	0.7	0.0022	17.1	0.1	3.4	3	0	0	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Fer4_18	PF13746.1	gi|289596652|ref|YP_003483348.1|	-	2.6e-07	30.9	30.3	0.015	15.6	0.5	6.0	7	0	0	7	7	5	3	4Fe-4S	dicluster	domain
K_oxygenase	PF13434.1	gi|289596652|ref|YP_003483348.1|	-	3e-06	26.4	2.0	0.0029	16.5	0.0	4.5	5	0	0	5	5	5	1	L-lysine	6-monooxygenase	(NADPH-requiring)
IlvN	PF07991.7	gi|289596652|ref|YP_003483348.1|	-	3.1e-06	26.6	2.7	0.032	13.6	0.0	3.8	4	0	0	4	4	3	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
FMO-like	PF00743.14	gi|289596652|ref|YP_003483348.1|	-	5.1e-06	24.9	0.2	0.22	9.6	0.0	3.9	4	0	0	4	4	4	1	Flavin-binding	monooxygenase-like
Fer4_15	PF13459.1	gi|289596652|ref|YP_003483348.1|	-	6.6e-06	26.5	31.0	0.00022	21.6	0.3	5.2	4	1	0	4	4	3	2	4Fe-4S	single	cluster	domain
Amino_oxidase	PF01593.19	gi|289596652|ref|YP_003483348.1|	-	1.8e-05	24.0	5.0	0.035	13.1	0.1	3.6	4	0	0	4	4	4	2	Flavin	containing	amine	oxidoreductase
Fer4_2	PF12797.2	gi|289596652|ref|YP_003483348.1|	-	4e-05	23.2	3.3	4e-05	23.2	2.3	7.1	6	1	0	6	6	5	3	4Fe-4S	binding	domain
ThiF	PF00899.16	gi|289596652|ref|YP_003483348.1|	-	0.00031	20.5	4.5	1.1	9.0	0.0	4.6	5	0	0	5	5	4	1	ThiF	family
Glyco_hydro_3_C	PF01915.17	gi|289596652|ref|YP_003483348.1|	-	0.00064	19.3	0.3	0.16	11.4	0.0	2.4	1	1	0	2	2	2	1	Glycosyl	hydrolase	family	3	C-terminal	domain
Lycopene_cycl	PF05834.7	gi|289596652|ref|YP_003483348.1|	-	0.0013	17.7	3.1	0.43	9.4	0.0	2.6	3	0	0	3	3	2	2	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|289596652|ref|YP_003483348.1|	-	0.0019	16.8	6.9	0.25	9.9	0.0	3.5	3	0	0	3	3	3	1	Tryptophan	halogenase
3HCDH_N	PF02737.13	gi|289596652|ref|YP_003483348.1|	-	0.002	17.8	7.1	0.3	10.7	0.2	3.1	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|289596652|ref|YP_003483348.1|	-	0.0035	17.3	6.4	2	8.3	0.1	4.1	3	1	1	4	4	4	1	NADH(P)-binding
Fer4_4	PF12800.2	gi|289596652|ref|YP_003483348.1|	-	0.0038	17.4	2.0	0.0038	17.4	1.4	7.6	8	1	0	8	8	5	2	4Fe-4S	binding	domain
NAD_binding_9	PF13454.1	gi|289596652|ref|YP_003483348.1|	-	0.0041	16.9	5.7	1.1	8.9	0.2	4.1	4	0	0	4	4	4	1	FAD-NAD(P)-binding
NAD_binding_2	PF03446.10	gi|289596652|ref|YP_003483348.1|	-	0.0066	16.3	4.7	0.12	12.1	0.2	3.1	3	1	0	3	3	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ELFV_dehydrog	PF00208.16	gi|289596652|ref|YP_003483348.1|	-	0.0098	15.4	1.8	7.5	6.0	0.1	3.5	3	0	0	3	3	3	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
DJ-1_PfpI	PF01965.19	gi|289596652|ref|YP_003483348.1|	-	0.026	13.9	0.3	0.25	10.7	0.0	2.7	3	1	1	4	4	3	0	DJ-1/PfpI	family
TrkA_N	PF02254.13	gi|289596652|ref|YP_003483348.1|	-	0.028	14.3	2.8	2.7	8.0	0.0	3.2	3	0	0	3	3	2	0	TrkA-N	domain
Fer4_13	PF13370.1	gi|289596652|ref|YP_003483348.1|	-	0.043	14.2	0.6	0.043	14.2	0.4	4.8	4	0	0	4	4	3	0	4Fe-4S	single	cluster	domain
NAD_Gly3P_dh_N	PF01210.18	gi|289596652|ref|YP_003483348.1|	-	0.043	13.5	0.6	2.1	8.0	0.1	3.0	3	0	0	3	3	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|289596652|ref|YP_003483348.1|	-	0.054	12.9	3.3	0.19	11.1	0.2	2.6	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|289596652|ref|YP_003483348.1|	-	0.062	12.6	1.6	1.3	8.3	0.2	2.8	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|289596653|ref|YP_003483349.1|	-	1.4e-14	54.4	0.0	7.6e-07	29.2	0.0	3.7	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_7	PF12838.2	gi|289596653|ref|YP_003483349.1|	-	3.6e-14	52.8	22.3	9.3e-09	35.5	8.9	3.5	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596653|ref|YP_003483349.1|	-	6.4e-14	50.8	30.8	4.1e-05	22.9	3.0	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|289596653|ref|YP_003483349.1|	-	3.1e-12	46.5	23.6	1.5e-07	31.5	7.7	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596653|ref|YP_003483349.1|	-	1.3e-09	37.7	20.8	5e-06	26.2	6.3	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596653|ref|YP_003483349.1|	-	8e-09	35.1	25.5	8.3e-06	25.5	7.2	3.4	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596653|ref|YP_003483349.1|	-	2.2e-07	30.4	32.3	0.00082	19.1	2.4	4.3	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|289596653|ref|YP_003483349.1|	-	1.3e-06	29.0	23.7	0.23	12.2	0.2	4.5	3	1	1	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|289596653|ref|YP_003483349.1|	-	3.3e-06	27.3	16.2	0.048	14.0	6.1	4.2	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596653|ref|YP_003483349.1|	-	1e-05	25.1	28.4	0.0096	15.7	1.3	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|289596653|ref|YP_003483349.1|	-	2.3e-05	24.7	21.4	0.2	12.1	2.7	4.3	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596653|ref|YP_003483349.1|	-	8.2e-05	22.5	24.0	0.00023	21.1	6.5	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596653|ref|YP_003483349.1|	-	0.0017	18.5	30.8	0.031	14.6	2.0	4.3	4	0	0	4	4	4	2	4Fe-4S	binding	domain
FAD_binding_2	PF00890.19	gi|289596653|ref|YP_003483349.1|	-	0.0036	16.2	0.0	0.39	9.4	0.0	2.6	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.19	gi|289596653|ref|YP_003483349.1|	-	0.0046	15.9	0.0	0.15	10.9	0.0	2.9	4	1	1	5	5	5	1	FAD	dependent	oxidoreductase
Fer4_15	PF13459.1	gi|289596653|ref|YP_003483349.1|	-	0.083	13.4	29.5	1.4	9.4	0.6	4.7	3	1	1	4	4	4	0	4Fe-4S	single	cluster	domain
GIDA	PF01134.17	gi|289596653|ref|YP_003483349.1|	-	0.11	11.3	0.3	16	4.2	0.0	3.1	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.14	gi|289596653|ref|YP_003483349.1|	-	0.14	11.1	0.0	4.2	6.3	0.1	2.3	2	0	0	2	2	2	0	FAD	binding	domain
DUF2865	PF11064.3	gi|289596653|ref|YP_003483349.1|	-	0.16	11.8	2.1	0.29	11.0	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2865)
Fer4_13	PF13370.1	gi|289596653|ref|YP_003483349.1|	-	0.43	10.9	25.2	8.5	6.8	0.9	4.6	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|289596653|ref|YP_003483349.1|	-	0.5	11.0	43.2	0.7	10.6	6.6	4.4	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|289596653|ref|YP_003483349.1|	-	0.58	10.0	15.0	0.057	13.3	4.0	2.7	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
FlpD	PF02662.11	gi|289596654|ref|YP_003483350.1|	-	9.6e-46	154.5	0.0	1.1e-45	154.3	0.0	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Fer4_8	PF13183.1	gi|289596655|ref|YP_003483351.1|	-	3.4e-09	36.6	10.3	3.4e-09	36.6	7.1	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289596655|ref|YP_003483351.1|	-	1.3e-07	31.9	12.4	2e-07	31.3	5.2	2.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
FrhB_FdhB_C	PF04432.8	gi|289596655|ref|YP_003483351.1|	-	3.6e-06	26.4	6.9	0.026	13.9	0.0	3.8	2	1	3	5	5	5	2	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
Fer4_9	PF13187.1	gi|289596655|ref|YP_003483351.1|	-	1e-05	25.6	11.2	1e-05	25.6	7.8	2.6	2	2	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289596655|ref|YP_003483351.1|	-	2e-05	24.8	9.5	0.0024	18.2	0.0	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596655|ref|YP_003483351.1|	-	3e-05	23.6	15.0	0.00032	20.4	1.5	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596655|ref|YP_003483351.1|	-	0.00019	21.2	15.2	0.00085	19.1	0.3	3.3	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596655|ref|YP_003483351.1|	-	0.00061	19.2	4.2	0.00061	19.2	2.9	3.1	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596655|ref|YP_003483351.1|	-	0.0012	19.1	17.6	0.0014	18.9	9.5	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596655|ref|YP_003483351.1|	-	0.0043	16.8	1.2	0.0043	16.8	0.8	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596655|ref|YP_003483351.1|	-	0.016	15.4	3.9	0.016	15.4	2.7	3.4	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|289596655|ref|YP_003483351.1|	-	0.019	15.4	5.5	0.019	15.4	3.8	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|289596655|ref|YP_003483351.1|	-	0.083	13.6	17.7	0.47	11.2	10.5	3.1	2	1	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|289596656|ref|YP_003483352.1|	-	4.1e-09	36.6	10.0	0.00089	19.5	0.1	2.9	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596656|ref|YP_003483352.1|	-	1.1e-08	34.7	17.6	6e-07	29.1	7.0	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289596656|ref|YP_003483352.1|	-	1.4e-07	31.4	8.5	1.4e-07	31.4	5.9	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596656|ref|YP_003483352.1|	-	1.4e-07	31.6	9.9	4.7e-07	29.9	5.5	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289596656|ref|YP_003483352.1|	-	1.6e-06	28.3	15.5	0.0008	19.7	0.6	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289596656|ref|YP_003483352.1|	-	6.1e-06	26.5	11.8	3.6e-05	24.0	6.0	2.7	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|289596656|ref|YP_003483352.1|	-	6.6e-06	25.7	19.0	0.0012	18.6	1.9	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer2_4	PF13510.1	gi|289596656|ref|YP_003483352.1|	-	1.2e-05	25.0	0.0	3e-05	23.7	0.0	1.7	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|289596656|ref|YP_003483352.1|	-	4.1e-05	22.9	20.3	0.012	15.2	1.3	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|289596656|ref|YP_003483352.1|	-	5.3e-05	22.8	0.0	5.3e-05	22.8	0.0	2.7	3	0	0	3	3	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_16	PF13484.1	gi|289596656|ref|YP_003483352.1|	-	0.00026	21.6	7.5	0.13	13.0	0.3	3.3	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|289596656|ref|YP_003483352.1|	-	0.0006	19.4	7.5	0.0041	16.7	4.3	2.6	2	1	1	3	3	3	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.1	gi|289596656|ref|YP_003483352.1|	-	0.0013	18.5	11.6	0.0013	18.5	8.1	2.2	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer2_3	PF13085.1	gi|289596656|ref|YP_003483352.1|	-	0.0064	16.3	0.2	0.018	14.8	0.0	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.2	gi|289596656|ref|YP_003483352.1|	-	0.0088	16.3	21.4	0.028	14.7	3.2	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Tnp_DNA_bind	PF14706.1	gi|289596656|ref|YP_003483352.1|	-	0.0095	15.6	0.6	0.25	11.0	0.0	2.9	2	1	1	3	3	3	1	Transposase	DNA-binding
Fer4_6	PF12837.2	gi|289596656|ref|YP_003483352.1|	-	0.033	14.0	2.6	0.033	14.0	1.8	3.3	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|289596656|ref|YP_003483352.1|	-	0.4	11.1	12.5	1.5	9.2	0.1	3.0	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|289596656|ref|YP_003483352.1|	-	0.5	10.9	9.3	2.2	8.9	0.0	3.2	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
E6	PF00518.12	gi|289596656|ref|YP_003483352.1|	-	1	9.6	9.4	0.6	10.4	0.2	2.3	2	0	0	2	2	2	0	Early	Protein	(E6)
Fer4_3	PF12798.2	gi|289596656|ref|YP_003483352.1|	-	6.9	7.4	25.5	2.2	9.0	2.6	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
FAD_binding_2	PF00890.19	gi|289596657|ref|YP_003483353.1|	-	1.4e-70	238.2	1.0	1.7e-70	238.0	0.7	1.1	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.19	gi|289596657|ref|YP_003483353.1|	-	0.00082	18.3	5.0	0.031	13.1	3.4	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|289596657|ref|YP_003483353.1|	-	0.0088	14.9	1.7	0.3	9.9	0.9	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|289596657|ref|YP_003483353.1|	-	0.0097	14.4	0.5	0.052	12.0	0.4	2.1	1	1	0	1	1	1	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|289596657|ref|YP_003483353.1|	-	0.029	14.2	4.1	1	9.1	2.8	2.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|289596657|ref|YP_003483353.1|	-	0.041	12.9	0.3	0.4	9.6	0.1	2.0	2	0	0	2	2	2	0	FAD	binding	domain
DUF2493	PF10686.4	gi|289596657|ref|YP_003483353.1|	-	0.08	12.5	0.0	0.98	9.0	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2493)
FAD_oxidored	PF12831.2	gi|289596657|ref|YP_003483353.1|	-	0.098	11.7	3.9	0.11	11.5	1.4	2.1	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
PagP	PF07017.6	gi|289596657|ref|YP_003483353.1|	-	0.13	11.5	0.0	0.23	10.7	0.0	1.3	1	0	0	1	1	1	0	Antimicrobial	peptide	resistance	and	lipid	A	acylation	protein	PagP
CCG	PF02754.11	gi|289596658|ref|YP_003483354.1|	-	1.7e-09	37.5	0.0	0.0045	16.9	0.0	3.1	3	0	0	3	3	3	2	Cysteine-rich	domain
DUF162	PF02589.10	gi|289596659|ref|YP_003483355.1|	-	2.8e-51	173.7	0.1	4.3e-51	173.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|289596659|ref|YP_003483355.1|	-	1e-10	41.4	2.9	3.1e-10	39.9	2.1	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|289596659|ref|YP_003483355.1|	-	2.4e-07	30.9	4.5	1.5e-06	28.4	3.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|289596659|ref|YP_003483355.1|	-	5.1e-07	30.0	3.8	0.00045	20.5	0.6	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596659|ref|YP_003483355.1|	-	5.3e-07	29.3	4.2	0.01	15.6	0.7	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|289596659|ref|YP_003483355.1|	-	7.9e-05	22.2	6.4	0.0011	18.5	0.3	3.0	2	1	1	3	3	3	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_9	PF13187.1	gi|289596659|ref|YP_003483355.1|	-	9.6e-05	22.5	6.9	0.00067	19.8	5.0	2.2	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289596659|ref|YP_003483355.1|	-	0.00045	20.9	3.8	0.0016	19.1	2.7	2.0	1	1	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|289596659|ref|YP_003483355.1|	-	0.00063	19.2	13.2	0.079	12.5	2.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|289596659|ref|YP_003483355.1|	-	0.00071	19.9	7.1	0.0046	17.3	5.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289596659|ref|YP_003483355.1|	-	0.00081	19.5	8.7	0.15	12.4	1.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289596659|ref|YP_003483355.1|	-	0.00081	19.1	12.4	0.11	12.5	1.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289596659|ref|YP_003483355.1|	-	0.2	11.5	11.0	4.1	7.3	7.7	2.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
SpecificRecomb	PF10136.4	gi|289596659|ref|YP_003483355.1|	-	0.26	9.2	0.1	0.36	8.8	0.1	1.1	1	0	0	1	1	1	0	Site-specific	recombinase
Fer4_3	PF12798.2	gi|289596659|ref|YP_003483355.1|	-	2	9.1	15.4	2.1	9.0	2.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|289596659|ref|YP_003483355.1|	-	9.6	6.6	7.8	4	7.9	0.5	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Malic_M	PF03949.10	gi|289596660|ref|YP_003483356.1|	-	3.4e-63	213.5	0.1	4.4e-63	213.2	0.0	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|289596660|ref|YP_003483356.1|	-	1e-34	119.7	0.0	3.1e-25	88.8	0.0	2.7	2	1	1	3	3	3	2	Malic	enzyme,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|289596660|ref|YP_003483356.1|	-	0.068	13.2	0.0	0.16	12.0	0.0	1.6	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ATP-grasp_2	PF08442.5	gi|289596661|ref|YP_003483357.1|	-	6.7e-63	211.7	0.2	1.4e-62	210.6	0.1	1.6	2	0	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|289596661|ref|YP_003483357.1|	-	3.4e-10	39.7	0.1	6.8e-10	38.7	0.1	1.5	1	0	0	1	1	1	1	CoA-ligase
GARS_A	PF01071.14	gi|289596661|ref|YP_003483357.1|	-	4.5e-08	32.8	0.2	1.3e-07	31.3	0.0	1.8	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.1	gi|289596661|ref|YP_003483357.1|	-	5.4e-07	29.0	0.3	3.2e-06	26.5	0.2	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|289596661|ref|YP_003483357.1|	-	0.0028	17.4	0.0	0.0057	16.4	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|289596661|ref|YP_003483357.1|	-	0.068	12.4	0.0	0.15	11.3	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CoA_binding	PF02629.14	gi|289596662|ref|YP_003483358.1|	-	2.3e-23	82.4	5.6	5.6e-22	78.0	0.8	2.4	2	0	0	2	2	2	2	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|289596662|ref|YP_003483358.1|	-	4.4e-19	68.5	0.4	7.5e-19	67.8	0.3	1.3	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|289596662|ref|YP_003483358.1|	-	1.5e-11	44.0	0.0	2.4e-11	43.3	0.0	1.3	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|289596662|ref|YP_003483358.1|	-	0.0011	19.0	0.1	0.0048	17.0	0.0	2.0	2	1	1	3	3	3	1	CoA	binding	domain
DUF1214	PF06742.6	gi|289596663|ref|YP_003483359.1|	-	0.038	14.4	0.3	1.7	9.1	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1214)
RIP	PF00161.14	gi|289596663|ref|YP_003483359.1|	-	0.18	11.0	0.0	0.34	10.0	0.0	1.4	1	0	0	1	1	1	0	Ribosome	inactivating	protein
UPF0066	PF01980.11	gi|289596664|ref|YP_003483360.1|	-	3.2e-42	143.2	0.0	3.8e-42	143.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
Fumerase	PF05681.9	gi|289596665|ref|YP_003483361.1|	-	7.5e-96	320.3	0.0	8.4e-96	320.1	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Fumerase_C	PF05683.7	gi|289596666|ref|YP_003483362.1|	-	1.9e-51	174.1	0.3	2.3e-51	173.8	0.2	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
MFS_1	PF07690.11	gi|289596667|ref|YP_003483363.1|	-	5.2e-52	176.7	43.7	5.2e-52	176.7	30.3	1.9	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|289596667|ref|YP_003483363.1|	-	9e-17	60.7	8.8	9e-17	60.7	6.1	2.2	2	0	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|289596667|ref|YP_003483363.1|	-	1.6e-07	30.0	42.3	0.00017	20.1	3.6	3.6	2	1	1	3	3	3	3	MFS/sugar	transport	protein
MFS_3	PF05977.8	gi|289596667|ref|YP_003483363.1|	-	8.8	4.3	19.2	0.079	11.0	4.8	2.7	1	1	0	2	2	2	0	Transmembrane	secretion	effector
Phage_integrase	PF00589.17	gi|289596668|ref|YP_003483364.1|	-	3.5e-25	88.6	0.6	6.7e-25	87.7	0.3	1.6	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|289596668|ref|YP_003483364.1|	-	1.1e-07	31.9	0.3	7.6e-07	29.2	0.0	2.4	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|289596668|ref|YP_003483364.1|	-	0.0023	18.1	1.6	0.012	15.9	0.1	2.7	1	1	1	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
DUF3879	PF12995.2	gi|289596668|ref|YP_003483364.1|	-	0.043	13.3	0.5	0.085	12.4	0.3	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3879)
DNA_Packaging_2	PF11123.3	gi|289596668|ref|YP_003483364.1|	-	0.058	13.2	0.4	0.57	10.0	0.0	2.5	2	0	0	2	2	2	0	DNA	packaging	protein
zf-BED	PF02892.10	gi|289596669|ref|YP_003483365.1|	-	0.00044	19.9	1.6	0.00065	19.4	1.1	1.4	1	0	0	1	1	1	1	BED	zinc	finger
Desulfoferrod_N	PF06397.7	gi|289596669|ref|YP_003483365.1|	-	0.01	15.1	0.3	0.015	14.6	0.2	1.2	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
CoaE	PF01121.15	gi|289596669|ref|YP_003483365.1|	-	0.036	13.4	0.0	0.043	13.2	0.0	1.0	1	0	0	1	1	1	0	Dephospho-CoA	kinase
PyrI_C	PF02748.10	gi|289596669|ref|YP_003483365.1|	-	0.11	11.8	0.3	0.16	11.4	0.2	1.3	1	0	0	1	1	1	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-C2H2_4	PF13894.1	gi|289596669|ref|YP_003483365.1|	-	0.15	12.4	4.8	0.72	10.3	2.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-CHCC	PF10276.4	gi|289596669|ref|YP_003483365.1|	-	0.45	10.3	6.6	7.9	6.4	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	domain
zf-C2H2	PF00096.21	gi|289596669|ref|YP_003483365.1|	-	0.89	10.0	4.7	1.3	9.5	2.6	1.8	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
HTH_45	PF14947.1	gi|289596670|ref|YP_003483366.1|	-	3.1e-05	23.6	1.9	6e-05	22.7	1.3	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.11	gi|289596670|ref|YP_003483366.1|	-	3.4e-05	23.9	0.5	5.9e-05	23.1	0.3	1.5	1	1	0	1	1	1	1	Penicillinase	repressor
HxlR	PF01638.12	gi|289596670|ref|YP_003483366.1|	-	5.1e-05	22.8	0.6	7.8e-05	22.2	0.4	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.1	gi|289596670|ref|YP_003483366.1|	-	0.00015	21.6	0.5	0.00029	20.7	0.3	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4364	PF14277.1	gi|289596670|ref|YP_003483366.1|	-	0.00019	21.0	0.2	0.00027	20.6	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_27	PF13463.1	gi|289596670|ref|YP_003483366.1|	-	0.0069	16.6	0.0	0.015	15.5	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|289596670|ref|YP_003483366.1|	-	0.012	15.3	0.2	0.022	14.4	0.2	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_36	PF13730.1	gi|289596670|ref|YP_003483366.1|	-	0.15	12.2	0.7	0.42	10.7	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
Kin17_mid	PF10357.4	gi|289596670|ref|YP_003483366.1|	-	0.2	11.3	1.5	0.31	10.6	0.2	1.8	2	0	0	2	2	2	0	Domain	of	Kin17	curved	DNA-binding	protein
YqzH	PF14164.1	gi|289596671|ref|YP_003483367.1|	-	0.0074	16.1	0.4	0.032	14.1	0.1	2.2	2	0	0	2	2	2	1	YqzH-like	protein
B12-binding	PF02310.14	gi|289596671|ref|YP_003483367.1|	-	0.093	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
DUF1803	PF08820.5	gi|289596672|ref|YP_003483368.1|	-	0.066	12.9	0.1	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
Sulfolobus_pRN	PF05584.6	gi|289596673|ref|YP_003483369.1|	-	0.013	15.3	0.2	0.015	15.2	0.1	1.4	1	1	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
PDDEXK_1	PF12705.2	gi|289596676|ref|YP_003483372.1|	-	1.3e-10	41.1	2.3	5.8e-10	38.9	1.6	2.0	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|289596676|ref|YP_003483372.1|	-	2.7e-07	30.6	8.1	3.1e-06	27.1	0.1	2.8	2	1	0	2	2	2	2	Domain	of	unknown	function	DUF83
Dna2	PF08696.6	gi|289596676|ref|YP_003483372.1|	-	0.029	13.6	0.1	0.14	11.4	0.0	1.9	2	0	0	2	2	2	0	DNA	replication	factor	Dna2
DUF2874	PF11396.3	gi|289596676|ref|YP_003483372.1|	-	0.074	13.0	1.6	6.8	6.7	0.0	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2874)
SWIM	PF04434.12	gi|289596678|ref|YP_003483374.1|	-	0.083	12.3	0.1	0.13	11.7	0.1	1.3	1	0	0	1	1	1	0	SWIM	zinc	finger
SF3a60_bindingd	PF12108.3	gi|289596679|ref|YP_003483375.1|	-	0.001	18.5	5.3	0.063	12.8	0.3	2.9	3	0	0	3	3	3	2	Splicing	factor	SF3a60	binding	domain
RRF	PF01765.14	gi|289596679|ref|YP_003483375.1|	-	0.09	12.2	0.0	0.11	11.9	0.0	1.3	1	1	0	1	1	1	0	Ribosome	recycling	factor
Beta_protein	PF14350.1	gi|289596680|ref|YP_003483376.1|	-	0.0035	16.5	0.6	0.0035	16.5	0.4	1.0	1	0	0	1	1	1	1	Beta	protein
DUF3388	PF11868.3	gi|289596680|ref|YP_003483376.1|	-	0.023	13.8	0.9	0.022	13.8	0.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3388)
Chitin_synth_2	PF03142.10	gi|289596680|ref|YP_003483376.1|	-	0.072	11.4	0.2	0.071	11.4	0.1	1.0	1	0	0	1	1	1	0	Chitin	synthase
Bac_DNA_binding	PF00216.16	gi|289596680|ref|YP_003483376.1|	-	0.083	12.9	0.1	0.091	12.7	0.1	1.2	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
UBN2_2	PF14227.1	gi|289596681|ref|YP_003483377.1|	-	0.023	14.2	1.1	0.023	14.2	0.7	1.2	1	1	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
Ribonucleas_3_2	PF11469.3	gi|289596681|ref|YP_003483377.1|	-	0.072	13.2	0.5	0.083	13.1	0.3	1.0	1	0	0	1	1	1	0	Ribonuclease	III
M16C_assoc	PF08367.6	gi|289596682|ref|YP_003483378.1|	-	0.054	12.3	1.3	0.055	12.3	0.9	1.0	1	0	0	1	1	1	0	Peptidase	M16C	associated
BRE1	PF08647.6	gi|289596682|ref|YP_003483378.1|	-	0.063	13.2	4.3	0.07	13.0	3.0	1.3	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
Lumazine_bd	PF12870.2	gi|289596682|ref|YP_003483378.1|	-	0.066	13.2	1.8	0.068	13.2	1.3	1.1	1	0	0	1	1	1	0	Lumazine-binding	domain
Integrase_AP2	PF14657.1	gi|289596683|ref|YP_003483379.1|	-	0.022	14.5	2.0	0.027	14.2	1.4	1.2	1	0	0	1	1	1	0	AP2-like	DNA-binding	integrase	domain
Pro_dh	PF01619.13	gi|289596683|ref|YP_003483379.1|	-	0.053	12.4	0.1	0.053	12.4	0.1	1.0	1	0	0	1	1	1	0	Proline	dehydrogenase
Peptidase_MA_2	PF13485.1	gi|289596684|ref|YP_003483380.1|	-	0.025	14.6	0.0	0.067	13.2	0.0	1.7	1	0	0	1	1	1	0	Peptidase	MA	superfamily
DUF3920	PF13058.1	gi|289596684|ref|YP_003483380.1|	-	0.026	14.3	1.6	0.027	14.3	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3920)
DUF1019	PF06254.6	gi|289596684|ref|YP_003483380.1|	-	1.9	8.6	4.6	2.4	8.3	0.9	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1019)
AAA_5	PF07728.9	gi|289596685|ref|YP_003483381.1|	-	1.3e-20	73.5	0.0	2.1e-19	69.6	0.0	2.9	3	1	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|289596685|ref|YP_003483381.1|	-	6e-08	32.8	0.0	2e-07	31.2	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|289596685|ref|YP_003483381.1|	-	4.6e-06	26.1	0.0	1.2e-05	24.8	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA	PF00004.24	gi|289596685|ref|YP_003483381.1|	-	9.2e-06	25.8	1.9	0.00061	19.9	0.1	3.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|289596685|ref|YP_003483381.1|	-	1.3e-05	24.4	0.0	2.7e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	KaiC
PhoH	PF02562.11	gi|289596685|ref|YP_003483381.1|	-	0.0014	17.9	0.0	0.0028	16.9	0.0	1.4	1	0	0	1	1	1	1	PhoH-like	protein
AAA_17	PF13207.1	gi|289596685|ref|YP_003483381.1|	-	0.0034	18.1	0.1	0.0034	18.1	0.1	3.0	3	0	0	3	3	2	1	AAA	domain
AAA_14	PF13173.1	gi|289596685|ref|YP_003483381.1|	-	0.0039	17.0	3.4	0.42	10.5	0.0	3.6	2	1	0	3	3	3	1	AAA	domain
AAA_19	PF13245.1	gi|289596685|ref|YP_003483381.1|	-	0.0097	15.6	0.0	0.018	14.7	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_25	PF13481.1	gi|289596685|ref|YP_003483381.1|	-	0.011	15.1	0.0	0.023	14.0	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|289596685|ref|YP_003483381.1|	-	0.027	13.3	0.0	0.083	11.7	0.0	1.8	1	0	0	1	1	1	0	NB-ARC	domain
AAA_18	PF13238.1	gi|289596685|ref|YP_003483381.1|	-	0.045	14.0	6.2	0.18	12.1	0.0	3.6	4	1	0	4	4	4	0	AAA	domain
UPF0079	PF02367.12	gi|289596685|ref|YP_003483381.1|	-	0.083	12.5	0.0	0.18	11.4	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_33	PF13671.1	gi|289596685|ref|YP_003483381.1|	-	0.11	12.3	0.0	0.24	11.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|289596685|ref|YP_003483381.1|	-	0.18	10.9	0.0	0.37	9.9	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
McrBC	PF10117.4	gi|289596686|ref|YP_003483382.1|	-	1.1e-71	241.4	2.1	1.4e-71	241.0	1.5	1.1	1	0	0	1	1	1	1	McrBC	5-methylcytosine	restriction	system	component
PDDEXK_1	PF12705.2	gi|289596686|ref|YP_003483382.1|	-	0.0089	15.4	0.1	0.013	14.9	0.1	1.4	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
TF_Zn_Ribbon	PF08271.7	gi|289596687|ref|YP_003483383.1|	-	0.00019	20.6	3.5	0.00045	19.4	2.4	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|289596687|ref|YP_003483383.1|	-	0.00031	19.8	6.5	0.023	13.9	5.0	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596687|ref|YP_003483383.1|	-	0.00033	20.0	4.7	0.00058	19.2	3.3	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|289596687|ref|YP_003483383.1|	-	0.0011	18.6	1.7	0.002	17.8	1.2	1.4	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DZR	PF12773.2	gi|289596687|ref|YP_003483383.1|	-	0.0053	16.5	0.3	0.0087	15.8	0.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|289596687|ref|YP_003483383.1|	-	0.024	14.3	0.3	0.038	13.7	0.2	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
HypA	PF01155.14	gi|289596687|ref|YP_003483383.1|	-	0.051	13.2	0.1	0.077	12.6	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
OrfB_Zn_ribbon	PF07282.6	gi|289596687|ref|YP_003483383.1|	-	0.073	12.7	0.5	0.17	11.5	0.4	1.7	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-tcix	PF14952.1	gi|289596687|ref|YP_003483383.1|	-	0.28	10.5	5.5	0.5	9.7	0.6	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-H2C2_2	PF13465.1	gi|289596687|ref|YP_003483383.1|	-	0.29	11.5	5.0	3.6	8.0	0.3	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF1610	PF07754.6	gi|289596687|ref|YP_003483383.1|	-	0.3	11.2	12.0	1.4	9.1	0.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-ISL3	PF14690.1	gi|289596687|ref|YP_003483383.1|	-	0.34	10.9	7.1	6.1	6.9	0.2	2.8	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RNA_POL_M_15KD	PF02150.11	gi|289596687|ref|YP_003483383.1|	-	1.1	8.9	3.8	2.4	7.9	2.6	1.5	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Prim_Zn_Ribbon	PF08273.7	gi|289596687|ref|YP_003483383.1|	-	1.6	8.8	6.7	0.87	9.7	0.2	2.6	3	0	0	3	3	3	0	Zinc-binding	domain	of	primase-helicase
zf-FPG_IleRS	PF06827.9	gi|289596687|ref|YP_003483383.1|	-	2.7	7.7	5.9	19	4.9	4.2	2.2	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
UPF0547	PF10571.4	gi|289596687|ref|YP_003483383.1|	-	6.2	6.6	8.9	6.3	6.5	1.2	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.5	gi|289596687|ref|YP_003483383.1|	-	8.1	6.4	7.8	64	3.6	5.4	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
THUMP	PF02926.12	gi|289596688|ref|YP_003483384.1|	-	0.036	13.9	0.0	0.061	13.2	0.0	1.4	1	0	0	1	1	1	0	THUMP	domain
RHH_3	PF12651.2	gi|289596689|ref|YP_003483385.1|	-	0.0017	18.0	1.0	0.5	10.1	0.3	2.4	2	0	0	2	2	2	2	Ribbon-helix-helix	domain
RHH_1	PF01402.16	gi|289596689|ref|YP_003483385.1|	-	0.002	17.9	1.5	0.0046	16.7	0.1	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
rve_3	PF13683.1	gi|289596690|ref|YP_003483386.1|	-	0.00024	20.5	2.5	0.0019	17.6	0.1	3.1	4	0	0	4	4	4	1	Integrase	core	domain
TrwB_AAD_bind	PF10412.4	gi|289596691|ref|YP_003483387.1|	-	1.7e-43	148.7	0.0	6.1e-41	140.3	0.0	2.1	1	1	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T4SS-DNA_transf	PF02534.9	gi|289596691|ref|YP_003483387.1|	-	1.9e-24	86.1	0.1	3.2e-24	85.3	0.1	1.3	1	1	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
TraG-D_C	PF12696.2	gi|289596691|ref|YP_003483387.1|	-	1.5e-17	63.6	0.0	2.6e-17	62.9	0.0	1.4	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
AAA_10	PF12846.2	gi|289596691|ref|YP_003483387.1|	-	1.1e-13	51.2	0.0	9.3e-13	48.2	0.0	2.0	1	1	0	1	1	1	1	AAA-like	domain
AAA_14	PF13173.1	gi|289596691|ref|YP_003483387.1|	-	4.4e-06	26.6	0.3	0.081	12.8	0.0	3.1	2	1	1	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|289596691|ref|YP_003483387.1|	-	0.00015	21.8	0.0	0.0044	17.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
DUF87	PF01935.12	gi|289596691|ref|YP_003483387.1|	-	0.00016	21.5	0.0	0.00037	20.3	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
Zeta_toxin	PF06414.7	gi|289596691|ref|YP_003483387.1|	-	0.0021	17.1	0.0	0.0083	15.2	0.0	2.0	2	0	0	2	2	2	1	Zeta	toxin
Arch_ATPase	PF01637.13	gi|289596691|ref|YP_003483387.1|	-	0.0028	17.4	0.8	0.039	13.6	0.0	3.0	3	1	1	4	4	4	1	Archaeal	ATPase
AAA_19	PF13245.1	gi|289596691|ref|YP_003483387.1|	-	0.011	15.4	0.0	0.025	14.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
SF3a60_bindingd	PF12108.3	gi|289596691|ref|YP_003483387.1|	-	0.015	14.8	0.1	0.075	12.5	0.0	2.3	1	0	0	1	1	1	0	Splicing	factor	SF3a60	binding	domain
UvrD-helicase	PF00580.16	gi|289596691|ref|YP_003483387.1|	-	0.016	14.5	0.5	0.052	12.8	0.0	1.9	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
Miro	PF08477.8	gi|289596691|ref|YP_003483387.1|	-	0.019	15.4	0.0	0.049	14.1	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|289596691|ref|YP_003483387.1|	-	0.02	15.7	0.0	0.062	14.1	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|289596691|ref|YP_003483387.1|	-	0.027	14.3	0.0	0.061	13.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|289596691|ref|YP_003483387.1|	-	0.034	13.7	0.0	0.12	11.8	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_16	PF13191.1	gi|289596691|ref|YP_003483387.1|	-	0.035	14.0	0.0	0.13	12.1	0.0	1.9	2	0	0	2	2	1	0	AAA	ATPase	domain
cobW	PF02492.14	gi|289596691|ref|YP_003483387.1|	-	0.037	13.4	0.0	0.069	12.5	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.13	gi|289596691|ref|YP_003483387.1|	-	0.04	13.4	0.0	0.1	12.0	0.0	1.6	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
RNA12	PF10443.4	gi|289596691|ref|YP_003483387.1|	-	0.06	11.8	0.0	0.1	11.1	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
AAA_5	PF07728.9	gi|289596691|ref|YP_003483387.1|	-	0.1	12.3	0.0	0.24	11.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|289596691|ref|YP_003483387.1|	-	0.11	12.8	0.0	0.32	11.3	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|289596691|ref|YP_003483387.1|	-	0.14	11.0	0.0	0.24	10.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|289596691|ref|YP_003483387.1|	-	0.19	11.4	0.0	0.36	10.5	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
YtpI	PF14007.1	gi|289596692|ref|YP_003483388.1|	-	0.043	13.7	1.8	0.098	12.5	1.2	1.5	1	0	0	1	1	1	0	YtpI-like	protein
Lon_C	PF05362.8	gi|289596692|ref|YP_003483388.1|	-	0.17	11.2	0.1	15	4.8	0.0	2.2	1	1	1	2	2	2	0	Lon	protease	(S16)	C-terminal	proteolytic	domain
CRISPR_Cas2	PF09827.4	gi|289596693|ref|YP_003483389.1|	-	4e-22	78.1	0.5	4.5e-22	77.9	0.4	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|289596694|ref|YP_003483390.1|	-	1e-74	251.1	1.1	1.2e-74	250.9	0.7	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
DUF2312	PF10073.4	gi|289596694|ref|YP_003483390.1|	-	0.018	14.3	0.4	0.039	13.2	0.3	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Cas_Cas4	PF01930.12	gi|289596695|ref|YP_003483391.1|	-	1.9e-44	151.4	2.2	2.1e-44	151.2	1.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|289596695|ref|YP_003483391.1|	-	2.8e-07	30.1	0.2	3.3e-06	26.6	0.0	2.0	2	0	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
DUF1870	PF08965.5	gi|289596695|ref|YP_003483391.1|	-	0.0072	15.9	0.1	0.022	14.4	0.1	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1870)
DUF1284	PF06935.6	gi|289596695|ref|YP_003483391.1|	-	0.01	15.9	0.3	0.019	15.1	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1284)
Cas_Cas6	PF01881.11	gi|289596696|ref|YP_003483392.1|	-	1.5e-25	90.2	3.1	1.9e-25	89.8	2.2	1.2	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas6
MotCF	PF09158.5	gi|289596696|ref|YP_003483392.1|	-	0.04	13.5	0.3	0.074	12.7	0.2	1.5	1	0	0	1	1	1	0	Bacteriophage	T4	MotA,	C-terminal
Cas_NE0113	PF09623.5	gi|289596697|ref|YP_003483393.1|	-	6.1e-20	71.6	0.0	8.1e-20	71.2	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
HupH_C	PF04809.8	gi|289596697|ref|YP_003483393.1|	-	0.0045	16.7	0.0	0.023	14.4	0.0	2.1	2	1	1	3	3	3	1	HupH	hydrogenase	expression	protein,	C-terminal	conserved	region
Cas_APE2256	PF09651.5	gi|289596697|ref|YP_003483393.1|	-	0.011	15.5	0.0	0.018	14.7	0.0	1.4	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
Methyltransf_23	PF13489.1	gi|289596697|ref|YP_003483393.1|	-	0.052	13.2	0.0	0.13	11.9	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Cytadhesin_P30	PF07271.6	gi|289596697|ref|YP_003483393.1|	-	0.14	11.4	0.0	0.18	11.0	0.0	1.1	1	0	0	1	1	1	0	Cytadhesin	P30/P32
Cas_DxTHG	PF09455.5	gi|289596698|ref|YP_003483394.1|	-	6.3e-59	200.0	8.4	7.5e-59	199.8	5.9	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
RAMPs	PF03787.10	gi|289596699|ref|YP_003483395.1|	-	7.8e-11	42.2	0.0	1.6e-10	41.2	0.0	1.6	1	1	0	1	1	1	1	RAMP	superfamily
RNA_pol_A_CTD	PF03118.10	gi|289596699|ref|YP_003483395.1|	-	0.23	10.9	1.2	0.49	9.8	0.0	2.1	2	0	0	2	2	2	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
RAMPs	PF03787.10	gi|289596701|ref|YP_003483397.1|	-	5e-15	55.9	0.2	9e-15	55.0	0.2	1.4	1	1	0	1	1	1	1	RAMP	superfamily
DUF310	PF03750.8	gi|289596702|ref|YP_003483398.1|	-	1.6e-19	70.2	0.3	2.9e-19	69.3	0.1	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF310)
Peptidase_S28	PF05577.7	gi|289596702|ref|YP_003483398.1|	-	0.041	12.4	0.0	0.055	12.0	0.0	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
HD	PF01966.17	gi|289596703|ref|YP_003483399.1|	-	8.8e-09	35.4	0.7	2.7e-08	33.8	0.2	1.9	2	0	0	2	2	2	1	HD	domain
AAA_14	PF13173.1	gi|289596704|ref|YP_003483400.1|	-	4.2e-24	84.8	0.0	9.2e-24	83.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|289596704|ref|YP_003483400.1|	-	2.2e-18	66.1	0.0	3.5e-18	65.5	0.0	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|289596704|ref|YP_003483400.1|	-	5e-05	23.1	0.7	0.0014	18.3	0.0	2.8	2	1	1	3	3	3	1	Archaeal	ATPase
AAA_17	PF13207.1	gi|289596704|ref|YP_003483400.1|	-	7.2e-05	23.6	0.0	0.00029	21.6	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
HTH_11	PF08279.7	gi|289596704|ref|YP_003483400.1|	-	0.00036	20.1	0.0	0.001	18.6	0.0	1.8	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|289596704|ref|YP_003483400.1|	-	0.00068	18.9	0.3	0.0018	17.6	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|289596704|ref|YP_003483400.1|	-	0.0017	18.0	0.0	0.004	16.9	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
AAA_33	PF13671.1	gi|289596704|ref|YP_003483400.1|	-	0.0022	17.8	0.0	0.0097	15.7	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|289596704|ref|YP_003483400.1|	-	0.0067	16.5	0.1	0.24	11.5	0.0	2.7	2	1	1	3	3	3	1	AAA	domain
FaeA	PF04703.7	gi|289596704|ref|YP_003483400.1|	-	0.0083	16.2	0.0	0.022	14.8	0.0	1.8	1	0	0	1	1	1	1	FaeA-like	protein
HTH_28	PF13518.1	gi|289596704|ref|YP_003483400.1|	-	0.011	15.7	0.0	0.021	14.8	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
AAA_18	PF13238.1	gi|289596704|ref|YP_003483400.1|	-	0.012	15.9	0.1	0.063	13.5	0.0	2.3	3	1	0	3	3	2	0	AAA	domain
Rrf2	PF02082.15	gi|289596704|ref|YP_003483400.1|	-	0.012	15.7	0.0	0.04	14.0	0.0	1.9	2	0	0	2	2	1	0	Transcriptional	regulator
MobB	PF03205.9	gi|289596704|ref|YP_003483400.1|	-	0.019	14.6	0.1	0.06	13.0	0.0	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|289596704|ref|YP_003483400.1|	-	0.021	15.2	0.0	0.18	12.2	0.0	2.2	2	0	0	2	2	2	0	Miro-like	protein
UPF0079	PF02367.12	gi|289596704|ref|YP_003483400.1|	-	0.024	14.2	0.0	0.051	13.2	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Gtr1_RagA	PF04670.7	gi|289596704|ref|YP_003483400.1|	-	0.024	13.7	0.3	4.1	6.4	0.0	2.3	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
HTH_20	PF12840.2	gi|289596704|ref|YP_003483400.1|	-	0.028	14.2	0.0	0.06	13.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|289596704|ref|YP_003483400.1|	-	0.044	13.9	0.2	0.1	12.7	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
AAA_16	PF13191.1	gi|289596704|ref|YP_003483400.1|	-	0.044	13.7	0.0	0.091	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
HTH_45	PF14947.1	gi|289596704|ref|YP_003483400.1|	-	0.056	13.2	0.0	0.16	11.7	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix
AAA_28	PF13521.1	gi|289596704|ref|YP_003483400.1|	-	0.076	12.9	0.0	1.7	8.5	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
HTH_DeoR	PF08220.7	gi|289596704|ref|YP_003483400.1|	-	0.087	12.3	0.0	0.19	11.2	0.0	1.6	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
SRPRB	PF09439.5	gi|289596704|ref|YP_003483400.1|	-	0.091	11.9	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
TonB_2	PF13103.1	gi|289596704|ref|YP_003483400.1|	-	0.098	12.7	0.0	0.26	11.3	0.0	1.7	1	0	0	1	1	1	0	TonB	C	terminal
HTH_23	PF13384.1	gi|289596704|ref|YP_003483400.1|	-	0.14	11.8	0.0	0.27	10.9	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
SpoOE-like	PF09388.5	gi|289596704|ref|YP_003483400.1|	-	0.76	9.3	4.5	7.5	6.1	0.6	3.2	3	0	0	3	3	3	0	Spo0E	like	sporulation	regulatory	protein
Plasmid_stabil	PF05016.9	gi|289596707|ref|YP_003483403.1|	-	1e-08	35.4	1.4	1.1e-08	35.3	1.0	1.0	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
Gp49	PF05973.9	gi|289596707|ref|YP_003483403.1|	-	0.00037	20.4	2.4	0.00044	20.2	1.7	1.1	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
DUF104	PF01954.11	gi|289596708|ref|YP_003483404.1|	-	3.3e-07	30.2	4.4	4.8e-07	29.7	3.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF104
CoaE	PF01121.15	gi|289596708|ref|YP_003483404.1|	-	0.073	12.4	0.1	0.08	12.3	0.1	1.0	1	0	0	1	1	1	0	Dephospho-CoA	kinase
PRESAN	PF09687.5	gi|289596708|ref|YP_003483404.1|	-	0.11	12.5	0.2	0.14	12.2	0.1	1.1	1	0	0	1	1	1	0	Plasmodium	RESA	N-terminal
Lactamase_B_2	PF12706.2	gi|289596709|ref|YP_003483405.1|	-	1.5e-16	60.5	0.0	1.4e-15	57.3	0.0	2.1	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289596709|ref|YP_003483405.1|	-	6.3e-09	35.7	1.0	2.6e-08	33.7	0.6	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|289596709|ref|YP_003483405.1|	-	9e-08	31.8	0.0	2.2e-07	30.5	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|289596709|ref|YP_003483405.1|	-	0.0024	17.6	0.2	0.18	11.5	0.0	3.3	2	1	1	3	3	3	1	Beta-lactamase	superfamily	domain
AAA	PF00004.24	gi|289596710|ref|YP_003483406.1|	-	0.0025	18.0	0.0	0.0025	18.0	0.0	1.1	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Chorein_N	PF12624.2	gi|289596710|ref|YP_003483406.1|	-	0.087	12.3	0.0	0.097	12.2	0.0	1.0	1	0	0	1	1	1	0	N-terminal	region	of	Chorein,	a	TM	vesicle-mediated	sorter
AAA_27	PF13514.1	gi|289596711|ref|YP_003483407.1|	-	6.5e-24	83.7	47.5	4.5e-21	74.3	0.0	4.0	3	1	0	3	3	3	2	AAA	domain
IncA	PF04156.9	gi|289596711|ref|YP_003483407.1|	-	3.8e-05	23.3	68.1	0.00054	19.6	0.1	5.9	2	2	3	5	5	5	3	IncA	protein
TMF_DNA_bd	PF12329.3	gi|289596711|ref|YP_003483407.1|	-	0.0024	17.6	6.0	0.0024	17.6	4.2	8.2	5	2	4	9	9	7	2	TATA	element	modulatory	factor	1	DNA	binding
SbcCD_C	PF13558.1	gi|289596711|ref|YP_003483407.1|	-	0.0027	17.6	0.0	0.0062	16.4	0.0	1.6	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
Reo_sigmaC	PF04582.7	gi|289596711|ref|YP_003483407.1|	-	0.0084	15.3	5.4	0.7	9.0	0.1	3.4	2	1	1	3	3	3	2	Reovirus	sigma	C	capsid	protein
AAA_29	PF13555.1	gi|289596711|ref|YP_003483407.1|	-	0.015	14.8	0.0	0.032	13.7	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|289596711|ref|YP_003483407.1|	-	0.11	11.7	20.3	1.1	8.3	0.0	2.8	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
DASH_Dam1	PF08653.5	gi|289596711|ref|YP_003483407.1|	-	0.11	12.3	2.0	6.8	6.5	0.1	4.0	2	0	0	2	2	2	0	DASH	complex	subunit	Dam1
Lipase_GDSL	PF00657.17	gi|289596711|ref|YP_003483407.1|	-	0.48	10.1	4.8	1.1	8.9	1.7	2.5	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase
AAA_13	PF13166.1	gi|289596711|ref|YP_003483407.1|	-	0.62	8.4	80.5	0.32	9.4	8.0	5.1	4	1	1	5	5	5	0	AAA	domain
DUF869	PF05911.6	gi|289596711|ref|YP_003483407.1|	-	0.97	7.5	65.8	0.044	12.0	5.7	4.4	2	1	3	5	5	5	0	Plant	protein	of	unknown	function	(DUF869)
Metallophos	PF00149.23	gi|289596712|ref|YP_003483408.1|	-	2.2e-16	59.8	1.9	3.5e-16	59.2	1.3	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|289596712|ref|YP_003483408.1|	-	3.6e-15	56.1	0.0	9.2e-15	54.8	0.0	1.7	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
AAA_assoc_C	PF09821.4	gi|289596713|ref|YP_003483409.1|	-	0.02	15.1	0.4	7.9	6.7	0.0	3.2	2	1	1	3	3	3	0	C-terminal	AAA-associated	domain
DUF4294	PF14127.1	gi|289596713|ref|YP_003483409.1|	-	0.11	12.1	5.8	0.31	10.6	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4294)
HemN_C	PF06969.11	gi|289596713|ref|YP_003483409.1|	-	0.12	12.4	0.0	0.33	11.0	0.0	1.8	1	0	0	1	1	1	0	HemN	C-terminal	domain
Cas_Cas02710	PF09670.5	gi|289596714|ref|YP_003483410.1|	-	4e-08	32.3	0.3	6.7e-08	31.5	0.1	1.3	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DUF2383	PF09537.5	gi|289596714|ref|YP_003483410.1|	-	0.018	15.2	0.4	0.052	13.7	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2383)
TrmB	PF01978.14	gi|289596714|ref|YP_003483410.1|	-	0.02	14.5	0.0	0.069	12.8	0.0	1.9	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
2OG-FeII_Oxy_2	PF13532.1	gi|289596714|ref|YP_003483410.1|	-	0.034	13.9	0.0	0.038	13.8	0.0	1.2	1	0	0	1	1	1	0	2OG-Fe(II)	oxygenase	superfamily
Cas_NE0113	PF09623.5	gi|289596714|ref|YP_003483410.1|	-	0.063	12.7	0.1	0.6	9.5	0.0	2.2	1	1	1	2	2	2	0	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_APE2256	PF09651.5	gi|289596714|ref|YP_003483410.1|	-	0.065	12.9	1.0	0.28	10.8	0.3	2.3	2	1	0	2	2	2	0	CRISPR-associated	protein	(Cas_APE2256)
KTI12	PF08433.5	gi|289596714|ref|YP_003483410.1|	-	0.12	11.6	1.7	0.68	9.0	0.1	2.1	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Terminase_3	PF04466.8	gi|289596715|ref|YP_003483411.1|	-	0.087	11.8	0.6	0.17	10.9	0.4	1.4	1	0	0	1	1	1	0	Phage	terminase	large	subunit
AAA_5	PF07728.9	gi|289596717|ref|YP_003483413.1|	-	0.00021	21.0	0.0	0.00091	18.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|289596717|ref|YP_003483413.1|	-	0.00031	20.3	0.0	0.00053	19.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|289596717|ref|YP_003483413.1|	-	0.0029	17.9	0.0	0.0044	17.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|289596717|ref|YP_003483413.1|	-	0.03	13.8	0.2	0.082	12.4	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
Methyltransf_17	PF12692.2	gi|289596717|ref|YP_003483413.1|	-	0.069	12.8	0.0	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	S-adenosyl-L-methionine	methyltransferase
VWA_2	PF13519.1	gi|289596718|ref|YP_003483414.1|	-	2.6e-09	37.4	0.0	4.9e-09	36.5	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|289596718|ref|YP_003483414.1|	-	5.6e-09	35.9	0.0	1.3e-08	34.7	0.0	1.6	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
CobT_C	PF11775.3	gi|289596718|ref|YP_003483414.1|	-	0.0013	18.1	0.0	0.0031	16.9	0.0	1.5	2	0	0	2	2	2	1	Cobalamin	biosynthesis	protein	CobT	VWA	domain
VWA_3	PF13768.1	gi|289596718|ref|YP_003483414.1|	-	0.0046	16.6	0.0	0.008	15.8	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF58	PF01882.13	gi|289596718|ref|YP_003483414.1|	-	0.0069	16.5	0.0	0.015	15.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
DUF2201	PF09967.4	gi|289596718|ref|YP_003483414.1|	-	0.14	12.1	0.0	0.26	11.3	0.0	1.3	1	0	0	1	1	1	0	VWA-like	domain	(DUF2201)
Mannitol_dh_C	PF08125.8	gi|289596719|ref|YP_003483415.1|	-	0.091	11.9	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Mannitol	dehydrogenase	C-terminal	domain
SHOCT	PF09851.4	gi|289596721|ref|YP_003483417.1|	-	2.4e-07	29.9	6.0	2.4e-07	29.9	4.2	2.6	2	0	0	2	2	2	1	Short	C-terminal	domain
DMAP_binding	PF06464.6	gi|289596721|ref|YP_003483417.1|	-	0.026	15.1	5.5	0.026	15.1	3.8	2.0	1	1	1	2	2	2	0	DMAP1-binding	Domain
DUF1528	PF07515.6	gi|289596721|ref|YP_003483417.1|	-	0.095	12.7	3.4	0.15	12.0	1.6	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1528)
Spond_N	PF06468.8	gi|289596721|ref|YP_003483417.1|	-	0.13	11.9	0.7	0.19	11.4	0.5	1.1	1	0	0	1	1	1	0	Spondin_N
GvpG	PF05120.7	gi|289596721|ref|YP_003483417.1|	-	0.13	12.0	9.2	0.032	14.0	3.9	1.7	1	1	1	2	2	2	0	Gas	vesicle	protein	G
Phage_integrase	PF00589.17	gi|289596723|ref|YP_003483419.1|	-	2.6e-09	36.9	0.1	1.4e-08	34.6	0.1	1.8	1	1	0	1	1	1	1	Phage	integrase	family
DUF2861	PF11060.3	gi|289596723|ref|YP_003483419.1|	-	0.038	13.3	0.1	0.056	12.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2861)
CBS	PF00571.23	gi|289596725|ref|YP_003483421.1|	-	2e-26	91.5	2.6	8.3e-15	54.3	0.1	2.2	2	0	0	2	2	2	2	CBS	domain
HTH_3	PF01381.17	gi|289596725|ref|YP_003483421.1|	-	2e-17	62.7	0.6	3.3e-16	58.8	0.2	2.2	2	0	0	2	2	2	1	Helix-turn-helix
HTH_31	PF13560.1	gi|289596725|ref|YP_003483421.1|	-	1.6e-11	44.2	0.0	3.6e-11	43.0	0.0	1.5	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|289596725|ref|YP_003483421.1|	-	3.6e-10	39.7	0.4	4.1e-09	36.3	0.1	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|289596725|ref|YP_003483421.1|	-	4.6e-06	26.3	0.4	1.5e-05	24.7	0.0	2.0	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|289596725|ref|YP_003483421.1|	-	2.1e-05	24.6	0.3	0.0045	17.1	0.0	3.0	2	1	1	3	3	3	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_25	PF13413.1	gi|289596725|ref|YP_003483421.1|	-	0.0001	21.8	0.1	0.00018	21.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
ArsC	PF03960.10	gi|289596725|ref|YP_003483421.1|	-	0.0063	16.5	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	ArsC	family
MarR_2	PF12802.2	gi|289596725|ref|YP_003483421.1|	-	0.018	14.7	0.0	0.048	13.3	0.0	1.7	1	0	0	1	1	1	0	MarR	family
E3_binding	PF02817.12	gi|289596725|ref|YP_003483421.1|	-	0.019	14.5	0.6	33	4.2	0.0	4.0	4	0	0	4	4	4	0	e3	binding	domain
HTH_23	PF13384.1	gi|289596725|ref|YP_003483421.1|	-	0.022	14.3	0.3	0.07	12.8	0.1	1.9	2	0	0	2	2	2	0	Homeodomain-like	domain
MarR	PF01047.17	gi|289596725|ref|YP_003483421.1|	-	0.023	14.3	0.0	0.05	13.3	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Sigma70_r4	PF04545.11	gi|289596725|ref|YP_003483421.1|	-	0.028	13.7	0.2	0.071	12.4	0.1	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_38	PF13936.1	gi|289596725|ref|YP_003483421.1|	-	0.035	13.6	0.7	0.1	12.1	0.2	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596725|ref|YP_003483421.1|	-	0.062	12.7	0.1	0.25	10.7	0.1	2.1	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF2786	PF10979.3	gi|289596725|ref|YP_003483421.1|	-	0.093	12.4	0.0	0.27	10.9	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2786)
TetR_N	PF00440.18	gi|289596725|ref|YP_003483421.1|	-	0.11	12.1	0.0	8	6.1	0.0	2.9	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	tetR	family
Terminase_2	PF03592.11	gi|289596725|ref|YP_003483421.1|	-	0.13	12.5	2.5	0.062	13.5	0.4	1.5	2	0	0	2	2	1	0	Terminase	small	subunit
RC-P840_PscD	PF10657.4	gi|289596727|ref|YP_003483423.1|	-	0.096	12.5	0.1	0.3	10.9	0.0	1.7	1	1	1	2	2	2	0	Photosystem	P840	reaction	centre	protein	PscD
HTH_27	PF13463.1	gi|289596728|ref|YP_003483424.1|	-	1.5e-07	31.6	0.3	1.8e-07	31.3	0.2	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|289596728|ref|YP_003483424.1|	-	6e-07	29.1	0.8	8.6e-07	28.6	0.5	1.4	1	1	0	1	1	1	1	Winged	helix-turn-helix
PadR	PF03551.9	gi|289596728|ref|YP_003483424.1|	-	2.7e-06	27.0	0.1	3.6e-06	26.6	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|289596728|ref|YP_003483424.1|	-	4.3e-06	26.3	0.2	7.4e-06	25.5	0.2	1.4	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|289596728|ref|YP_003483424.1|	-	1.5e-05	24.7	0.0	1.9e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|289596728|ref|YP_003483424.1|	-	1.7e-05	24.3	0.0	2.1e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|289596728|ref|YP_003483424.1|	-	3.1e-05	23.2	1.2	0.00014	21.1	0.8	2.0	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|289596728|ref|YP_003483424.1|	-	8.5e-05	22.6	0.1	0.00011	22.2	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|289596728|ref|YP_003483424.1|	-	9.2e-05	22.0	0.4	0.00012	21.7	0.3	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|289596728|ref|YP_003483424.1|	-	0.00012	21.7	0.1	0.00015	21.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|289596728|ref|YP_003483424.1|	-	0.00012	21.9	0.4	0.00015	21.7	0.3	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4364	PF14277.1	gi|289596728|ref|YP_003483424.1|	-	0.00029	20.5	0.1	0.00038	20.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_5	PF01022.15	gi|289596728|ref|YP_003483424.1|	-	0.0004	19.9	0.4	0.0004	19.9	0.3	1.5	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
Replic_Relax	PF13814.1	gi|289596728|ref|YP_003483424.1|	-	0.00049	19.9	0.0	0.00053	19.8	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
Mrr_N	PF14338.1	gi|289596728|ref|YP_003483424.1|	-	0.00065	19.7	0.0	0.0013	18.7	0.0	1.7	1	1	0	1	1	1	1	Mrr	N-terminal	domain
HTH_IclR	PF09339.5	gi|289596728|ref|YP_003483424.1|	-	0.0025	17.3	0.0	0.0036	16.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HxlR	PF01638.12	gi|289596728|ref|YP_003483424.1|	-	0.0074	15.9	0.2	0.0087	15.6	0.2	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|289596728|ref|YP_003483424.1|	-	0.011	15.7	0.4	0.032	14.1	0.0	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF505	PF04458.7	gi|289596728|ref|YP_003483424.1|	-	0.013	13.6	0.2	0.013	13.6	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
Phage_rep_org_N	PF09681.5	gi|289596728|ref|YP_003483424.1|	-	0.024	14.1	0.0	0.032	13.8	0.0	1.4	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TFIIE_alpha	PF02002.12	gi|289596728|ref|YP_003483424.1|	-	0.054	13.0	0.8	0.076	12.5	0.5	1.4	1	1	0	1	1	1	0	TFIIE	alpha	subunit
TetR	PF13972.1	gi|289596728|ref|YP_003483424.1|	-	0.071	12.5	0.0	0.094	12.1	0.0	1.1	1	0	0	1	1	1	0	Bacterial	transcriptional	repressor
DUF3336	PF11815.3	gi|289596728|ref|YP_003483424.1|	-	0.1	12.1	0.3	0.11	12.0	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3336)
RE_BstXI	PF09552.5	gi|289596729|ref|YP_003483425.1|	-	0.017	14.1	0.2	0.065	12.2	0.1	2.0	1	1	0	1	1	1	0	BstXI	restriction	endonuclease
DUF1476	PF07345.6	gi|289596729|ref|YP_003483425.1|	-	0.037	14.2	1.7	0.042	14.0	0.0	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1476)
N6_N4_Mtase	PF01555.13	gi|289596730|ref|YP_003483426.1|	-	1.3e-32	113.1	3.6	1.3e-32	113.1	2.5	4.3	2	2	0	2	2	2	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|289596730|ref|YP_003483426.1|	-	4.3e-09	36.4	0.0	0.00021	21.2	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|289596730|ref|YP_003483426.1|	-	0.00027	20.5	0.1	0.0018	17.8	0.0	2.2	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
AAA_10	PF12846.2	gi|289596731|ref|YP_003483427.1|	-	2.8e-41	141.9	0.6	4.2e-41	141.3	0.4	1.2	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|289596731|ref|YP_003483427.1|	-	3.3e-06	27.0	0.4	1.3e-05	25.0	0.0	2.1	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
Zot	PF05707.7	gi|289596731|ref|YP_003483427.1|	-	0.00045	19.7	0.7	0.0053	16.2	0.3	2.4	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
FtsK_SpoIIIE	PF01580.13	gi|289596731|ref|YP_003483427.1|	-	0.00073	19.0	0.0	0.0021	17.5	0.0	1.7	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|289596731|ref|YP_003483427.1|	-	0.012	15.7	0.2	7.3	6.7	0.0	2.5	1	1	1	2	2	2	0	AAA	domain
DEAD	PF00270.24	gi|289596731|ref|YP_003483427.1|	-	0.055	12.9	0.0	0.47	9.9	0.0	2.2	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_29	PF13555.1	gi|289596731|ref|YP_003483427.1|	-	0.12	11.8	0.0	0.27	10.8	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Peptidase_M50B	PF13398.1	gi|289596732|ref|YP_003483428.1|	-	0.13	11.6	4.4	0.16	11.3	3.0	1.1	1	0	0	1	1	1	0	Peptidase	M50B-like
DUF939	PF06081.6	gi|289596732|ref|YP_003483428.1|	-	0.7	9.7	5.0	0.67	9.8	0.1	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF939)
DUF2626	PF11117.3	gi|289596732|ref|YP_003483428.1|	-	3.4	8.1	11.7	46	4.5	8.1	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2626)
PrgI	PF12666.2	gi|289596733|ref|YP_003483429.1|	-	0.00049	20.1	2.1	0.00092	19.3	1.5	1.4	1	0	0	1	1	1	1	PrgI	family	protein
Flavi_NS4A	PF01350.12	gi|289596737|ref|YP_003483433.1|	-	0.047	13.2	0.1	0.67	9.4	0.0	2.1	2	0	0	2	2	2	0	Flavivirus	non-structural	protein	NS4A
GRP	PF07172.6	gi|289596737|ref|YP_003483433.1|	-	0.6	10.6	15.5	13	6.3	0.0	2.7	2	0	0	2	2	2	0	Glycine	rich	protein	family
PspB	PF06667.7	gi|289596737|ref|YP_003483433.1|	-	0.84	9.6	3.3	24	4.9	0.5	2.4	2	0	0	2	2	2	0	Phage	shock	protein	B
GRP	PF07172.6	gi|289596738|ref|YP_003483434.1|	-	1.9	9.0	8.1	1.2e+02	3.1	5.8	2.3	2	0	0	2	2	2	0	Glycine	rich	protein	family
Colicin_V	PF02674.11	gi|289596739|ref|YP_003483435.1|	-	0.026	14.3	3.9	0.054	13.3	2.7	1.6	1	1	0	1	1	1	0	Colicin	V	production	protein
DUF4349	PF14257.1	gi|289596739|ref|YP_003483435.1|	-	0.053	12.7	2.0	0.058	12.6	1.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4349)
COPI_assoc	PF08507.5	gi|289596739|ref|YP_003483435.1|	-	0.061	13.0	0.3	0.077	12.6	0.2	1.2	1	0	0	1	1	1	0	COPI	associated	protein
EmrE	PF13536.1	gi|289596739|ref|YP_003483435.1|	-	0.21	11.8	5.2	0.24	11.5	3.6	1.1	1	0	0	1	1	1	0	Multidrug	resistance	efflux	transporter
HOK_GEF	PF01848.11	gi|289596739|ref|YP_003483435.1|	-	4	6.8	6.0	2.1	7.7	2.1	1.9	2	0	0	2	2	2	0	Hok/gef	family
TctB	PF07331.6	gi|289596740|ref|YP_003483436.1|	-	0.011	15.3	4.2	0.011	15.3	2.9	2.0	2	0	0	2	2	2	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF2976	PF11190.3	gi|289596740|ref|YP_003483436.1|	-	0.014	14.9	3.4	0.014	14.9	2.4	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
MscS_TM	PF12794.2	gi|289596740|ref|YP_003483436.1|	-	0.017	13.7	3.4	0.024	13.2	2.4	1.4	1	1	0	1	1	1	0	Mechanosensitive	ion	channel	inner	membrane	domain	1
DUF4149	PF13664.1	gi|289596740|ref|YP_003483436.1|	-	0.05	13.6	1.9	0.3	11.1	1.5	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4149)
PEN-2	PF10251.4	gi|289596740|ref|YP_003483436.1|	-	0.15	12.3	2.0	0.25	11.6	0.6	1.9	2	0	0	2	2	2	0	Presenilin	enhancer-2	subunit	of	gamma	secretase
DUF4013	PF13197.1	gi|289596740|ref|YP_003483436.1|	-	0.42	9.9	11.5	1.1	8.6	8.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4013)
Tetraspannin	PF00335.15	gi|289596740|ref|YP_003483436.1|	-	1.9	7.7	8.2	0.53	9.5	3.2	1.7	1	1	1	2	2	2	0	Tetraspanin	family
DUF4282	PF14110.1	gi|289596740|ref|YP_003483436.1|	-	4.2	7.6	8.1	0.98	9.6	3.0	1.9	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4282)
UPF0233	PF06781.7	gi|289596740|ref|YP_003483436.1|	-	4.5	6.9	8.8	1	9.0	0.8	2.8	1	1	2	3	3	3	0	Uncharacterised	protein	family	(UPF0233)
DUF2484	PF10658.4	gi|289596740|ref|YP_003483436.1|	-	6.3	6.9	10.9	8	6.6	6.3	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2484)
Big_3_4	PF13754.1	gi|289596741|ref|YP_003483437.1|	-	2.8e-23	81.9	16.8	4.9e-07	29.9	0.1	8.1	9	1	0	9	9	8	5	Bacterial	Ig-like	domain	(group	3)
Big_3_3	PF13750.1	gi|289596741|ref|YP_003483437.1|	-	1.3e-16	60.4	5.1	0.0016	17.9	0.0	6.5	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	3)
SWM_repeat	PF13753.1	gi|289596741|ref|YP_003483437.1|	-	1.9e-05	23.8	20.9	0.00025	20.2	0.9	4.1	1	1	2	4	4	4	2	Putative	flagellar	system-associated	repeat
Inhibitor_I42	PF09394.5	gi|289596741|ref|YP_003483437.1|	-	0.0018	18.5	1.8	1.8	8.9	0.1	3.0	2	0	0	2	2	2	2	Chagasin	family	peptidase	inhibitor	I42
TMEM154	PF15102.1	gi|289596741|ref|YP_003483437.1|	-	0.0033	17.1	0.1	0.0057	16.3	0.1	1.3	1	0	0	1	1	1	1	TMEM154	protein	family
CcmH	PF03918.9	gi|289596741|ref|YP_003483437.1|	-	0.024	13.6	0.1	0.04	12.8	0.0	1.3	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein
PIRT	PF15099.1	gi|289596741|ref|YP_003483437.1|	-	0.029	13.5	0.1	0.053	12.7	0.1	1.4	1	0	0	1	1	1	0	Phosphoinositide-interacting	protein	family
YajC	PF02699.10	gi|289596741|ref|YP_003483437.1|	-	0.05	13.2	0.2	0.11	12.2	0.2	1.5	1	0	0	1	1	1	0	Preprotein	translocase	subunit
Cadherin	PF00028.12	gi|289596741|ref|YP_003483437.1|	-	0.15	12.3	3.4	7.1	6.9	0.1	4.5	5	0	0	5	5	5	0	Cadherin	domain
Big_3_2	PF12245.3	gi|289596741|ref|YP_003483437.1|	-	0.19	11.2	7.0	0.91	9.1	0.0	3.9	5	0	0	5	5	5	0	Bacterial	Ig-like	domain	(group	3)
HYR	PF02494.11	gi|289596741|ref|YP_003483437.1|	-	0.26	11.3	6.5	8.9	6.4	0.0	4.4	5	1	0	5	5	5	0	HYR	domain
E6	PF00518.12	gi|289596742|ref|YP_003483438.1|	-	0.086	13.1	0.2	0.096	13.0	0.1	1.2	1	0	0	1	1	1	0	Early	Protein	(E6)
Spb1_C	PF07780.7	gi|289596742|ref|YP_003483438.1|	-	0.22	10.9	1.3	0.26	10.7	0.9	1.1	1	0	0	1	1	1	0	Spb1	C-terminal	domain
UvsW	PF11637.3	gi|289596742|ref|YP_003483438.1|	-	2.2	8.0	4.5	0.69	9.6	0.3	2.1	2	1	1	3	3	3	0	ATP-dependant	DNA	helicase	UvsW
Biotin_lipoyl_2	PF13533.1	gi|289596743|ref|YP_003483439.1|	-	0.05	13.2	0.0	11	5.8	0.0	2.4	2	0	0	2	2	2	0	Biotin-lipoyl	like
H-kinase_dim	PF02895.9	gi|289596743|ref|YP_003483439.1|	-	0.077	13.3	0.7	0.17	12.2	0.5	1.6	1	0	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
MerR-DNA-bind	PF09278.6	gi|289596743|ref|YP_003483439.1|	-	0.12	12.8	2.0	6.2	7.2	0.4	2.7	2	1	0	2	2	2	0	MerR,	DNA	binding
TSC22	PF01166.13	gi|289596743|ref|YP_003483439.1|	-	0.25	11.3	3.2	0.21	11.5	0.6	2.1	2	0	0	2	2	2	0	TSC-22/dip/bun	family
Pox_A_type_inc	PF04508.7	gi|289596743|ref|YP_003483439.1|	-	0.29	11.0	3.1	1.1	9.1	2.2	2.2	1	0	0	1	1	1	0	Viral	A-type	inclusion	protein	repeat
DUF3502	PF12010.3	gi|289596744|ref|YP_003483440.1|	-	0.085	12.8	0.0	0.085	12.8	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3502)
UPF0150	PF03681.10	gi|289596744|ref|YP_003483440.1|	-	0.087	12.4	0.2	0.087	12.4	0.1	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0150)
DUF46	PF01864.12	gi|289596746|ref|YP_003483442.1|	-	8.8e-55	185.2	3.8	1.1e-54	184.9	2.6	1.0	1	0	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|289596746|ref|YP_003483442.1|	-	8.5e-10	38.7	7.4	8.5e-10	38.7	5.1	1.8	1	1	0	1	1	1	1	Cytidylyltransferase	family
Bacteriocin_IIc	PF10439.4	gi|289596746|ref|YP_003483442.1|	-	0.41	10.7	2.7	2.5	8.2	0.3	2.2	2	0	0	2	2	2	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
DUF3792	PF12670.2	gi|289596746|ref|YP_003483442.1|	-	3.3	7.5	11.2	0.77	9.6	1.8	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3792)
Metallophos_2	PF12850.2	gi|289596748|ref|YP_003483444.1|	-	1.9e-36	125.2	0.0	2.2e-36	125.0	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|289596748|ref|YP_003483444.1|	-	5.4e-18	65.1	0.7	7.8e-18	64.5	0.5	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|289596748|ref|YP_003483444.1|	-	0.00029	20.0	0.0	0.072	12.2	0.0	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
AIM24	PF01987.12	gi|289596749|ref|YP_003483445.1|	-	1.4e-54	184.8	0.2	1.5e-54	184.6	0.1	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
Orbi_VP3	PF01700.11	gi|289596749|ref|YP_003483445.1|	-	0.011	13.1	0.0	0.016	12.7	0.0	1.1	1	0	0	1	1	1	0	Orbivirus	VP3	(T2)	protein
AAA	PF00004.24	gi|289596750|ref|YP_003483446.1|	-	1e-100	333.1	0.0	4.4e-49	166.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|289596750|ref|YP_003483446.1|	-	7.8e-26	89.8	0.2	4.4e-25	87.4	0.4	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.9	gi|289596750|ref|YP_003483446.1|	-	7.3e-17	61.7	0.0	2.6e-07	30.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|289596750|ref|YP_003483446.1|	-	1.8e-16	59.9	0.0	1.8e-08	33.6	0.0	2.8	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|289596750|ref|YP_003483446.1|	-	4.7e-15	56.0	0.0	9e-07	29.0	0.0	3.1	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289596750|ref|YP_003483446.1|	-	6.5e-15	55.4	0.3	1.1e-05	25.5	0.0	4.2	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|289596750|ref|YP_003483446.1|	-	2.9e-13	49.8	0.0	1.5e-05	24.9	0.0	3.5	4	0	0	4	4	4	2	AAA	domain
AAA_17	PF13207.1	gi|289596750|ref|YP_003483446.1|	-	1.4e-11	45.2	0.8	0.00015	22.5	0.1	3.5	2	2	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|289596750|ref|YP_003483446.1|	-	1.6e-11	44.0	0.2	0.00027	20.6	0.0	4.3	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|289596750|ref|YP_003483446.1|	-	1.7e-09	37.7	0.0	0.0024	17.7	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|289596750|ref|YP_003483446.1|	-	2e-09	36.6	9.1	7.9e-05	21.5	0.1	3.3	4	0	0	4	4	3	2	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|289596750|ref|YP_003483446.1|	-	3.8e-09	35.9	0.0	0.0012	18.0	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|289596750|ref|YP_003483446.1|	-	4e-09	36.1	0.0	0.0012	18.2	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|289596750|ref|YP_003483446.1|	-	1.6e-08	34.5	0.2	0.0056	16.3	0.0	4.2	3	2	1	4	4	4	2	Archaeal	ATPase
CDC48_2	PF02933.12	gi|289596750|ref|YP_003483446.1|	-	6e-08	32.2	2.4	6e-08	32.2	1.6	1.9	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_19	PF13245.1	gi|289596750|ref|YP_003483446.1|	-	7.9e-08	31.9	4.2	0.005	16.5	0.1	3.0	3	0	0	3	3	2	2	Part	of	AAA	domain
KaiC	PF06745.8	gi|289596750|ref|YP_003483446.1|	-	1.2e-07	31.1	0.4	0.035	13.2	0.0	3.7	2	1	1	3	3	3	2	KaiC
AAA_18	PF13238.1	gi|289596750|ref|YP_003483446.1|	-	1.3e-07	32.0	0.8	0.013	15.7	0.0	3.2	3	0	0	3	3	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|289596750|ref|YP_003483446.1|	-	2.3e-07	30.9	0.0	0.037	14.1	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
Sigma54_activat	PF00158.21	gi|289596750|ref|YP_003483446.1|	-	2.3e-07	30.4	0.0	0.029	13.8	0.0	3.6	2	2	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|289596750|ref|YP_003483446.1|	-	3.5e-07	29.5	0.2	0.016	14.3	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|289596750|ref|YP_003483446.1|	-	4.4e-07	29.9	0.0	0.041	13.8	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289596750|ref|YP_003483446.1|	-	6.8e-07	29.4	0.0	0.036	14.1	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|289596750|ref|YP_003483446.1|	-	2.6e-06	27.7	0.2	0.094	13.0	0.0	3.2	3	0	0	3	3	3	2	ABC	transporter
AAA_25	PF13481.1	gi|289596750|ref|YP_003483446.1|	-	3.2e-06	26.6	4.7	0.55	9.5	0.2	4.0	2	2	2	4	4	4	2	AAA	domain
AAA_24	PF13479.1	gi|289596750|ref|YP_003483446.1|	-	3.9e-06	26.6	0.6	0.056	13.0	0.1	2.5	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.8	gi|289596750|ref|YP_003483446.1|	-	4.3e-06	25.8	0.0	0.017	14.0	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|289596750|ref|YP_003483446.1|	-	1.4e-05	24.8	0.0	0.097	12.2	0.0	3.0	2	1	0	2	2	2	2	Bacterial	dnaA	protein
DUF2075	PF09848.4	gi|289596750|ref|YP_003483446.1|	-	2.9e-05	23.2	0.1	0.095	11.6	0.0	2.5	3	0	0	3	3	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_3	PF07726.6	gi|289596750|ref|YP_003483446.1|	-	2.9e-05	23.6	0.0	0.3	10.6	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.12	gi|289596750|ref|YP_003483446.1|	-	3.4e-05	22.8	0.1	0.15	10.9	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
NTPase_1	PF03266.10	gi|289596750|ref|YP_003483446.1|	-	4.1e-05	23.3	4.5	3.6	7.2	0.0	5.0	3	2	2	5	5	4	0	NTPase
ATP-synt_ab	PF00006.20	gi|289596750|ref|YP_003483446.1|	-	4.6e-05	23.0	0.2	1.9	7.9	0.0	3.4	3	0	0	3	3	3	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|289596750|ref|YP_003483446.1|	-	6.3e-05	21.9	0.0	0.15	10.9	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
PhoH	PF02562.11	gi|289596750|ref|YP_003483446.1|	-	6.8e-05	22.1	3.3	0.096	11.9	0.0	3.1	4	0	0	4	4	2	2	PhoH-like	protein
NACHT	PF05729.7	gi|289596750|ref|YP_003483446.1|	-	0.0001	21.9	0.0	1.1	8.8	0.0	3.7	3	0	0	3	3	3	1	NACHT	domain
AAA_11	PF13086.1	gi|289596750|ref|YP_003483446.1|	-	0.00039	20.0	0.0	1.1	8.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
T2SE	PF00437.15	gi|289596750|ref|YP_003483446.1|	-	0.00093	18.1	0.0	0.5	9.2	0.0	3.1	3	1	0	3	3	2	1	Type	II/IV	secretion	system	protein
AAA_30	PF13604.1	gi|289596750|ref|YP_003483446.1|	-	0.0012	18.4	0.0	1.9	8.0	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|289596750|ref|YP_003483446.1|	-	0.0014	18.5	0.1	0.25	11.2	0.0	2.9	3	0	0	3	3	3	1	Cytidylate	kinase-like	family
SKI	PF01202.17	gi|289596750|ref|YP_003483446.1|	-	0.0016	18.3	0.1	1.9	8.3	0.0	2.6	2	0	0	2	2	2	1	Shikimate	kinase
Vps4_C	PF09336.5	gi|289596750|ref|YP_003483446.1|	-	0.0039	17.0	0.4	3.2	7.6	0.1	3.1	3	0	0	3	3	2	0	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|289596750|ref|YP_003483446.1|	-	0.0045	16.6	0.0	2.4	7.8	0.0	2.5	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
MCM	PF00493.18	gi|289596750|ref|YP_003483446.1|	-	0.0095	14.7	0.0	0.62	8.8	0.0	2.6	2	0	0	2	2	2	1	MCM2/3/5	family
KAP_NTPase	PF07693.9	gi|289596750|ref|YP_003483446.1|	-	0.013	14.5	0.4	4.4	6.2	0.0	3.5	2	2	2	4	4	4	0	KAP	family	P-loop	domain
CPT	PF07931.7	gi|289596750|ref|YP_003483446.1|	-	0.013	15.0	0.1	16	5.0	0.0	3.3	3	0	0	3	3	3	0	Chloramphenicol	phosphotransferase-like	protein
ResIII	PF04851.10	gi|289596750|ref|YP_003483446.1|	-	0.014	15.2	0.0	6.4	6.5	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Zot	PF05707.7	gi|289596750|ref|YP_003483446.1|	-	0.021	14.2	0.3	6.9	6.0	0.1	3.8	2	1	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
Viral_helicase1	PF01443.13	gi|289596750|ref|YP_003483446.1|	-	0.058	12.9	0.0	1.6	8.1	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.1	gi|289596750|ref|YP_003483446.1|	-	0.078	12.5	0.0	14	5.3	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|289596750|ref|YP_003483446.1|	-	0.082	13.2	1.2	17	5.6	0.0	3.3	3	1	0	3	3	3	0	AAA	domain
KTI12	PF08433.5	gi|289596750|ref|YP_003483446.1|	-	0.11	11.6	0.0	13	4.8	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
IPT	PF01745.11	gi|289596750|ref|YP_003483446.1|	-	0.15	11.2	0.1	14	4.8	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
DAP3	PF10236.4	gi|289596750|ref|YP_003483446.1|	-	0.17	10.7	0.0	4.3	6.1	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_21	PF13304.1	gi|289596750|ref|YP_003483446.1|	-	0.22	11.4	0.9	52	3.6	0.0	3.2	2	1	0	3	3	3	0	AAA	domain
PRC	PF05239.11	gi|289596751|ref|YP_003483447.1|	-	6.8e-09	35.4	0.1	8e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
Nup88	PF10168.4	gi|289596751|ref|YP_003483447.1|	-	0.089	10.6	0.0	0.096	10.5	0.0	1.0	1	0	0	1	1	1	0	Nuclear	pore	component
eRF1_2	PF03464.10	gi|289596752|ref|YP_003483448.1|	-	4.9e-39	133.6	0.2	1.2e-38	132.4	0.1	1.7	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|289596752|ref|YP_003483448.1|	-	1.1e-33	115.8	0.1	4.3e-33	113.9	0.0	2.1	2	0	0	2	2	1	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|289596752|ref|YP_003483448.1|	-	5.3e-24	84.2	0.0	9.5e-24	83.4	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	1
zf-ribbon_3	PF13248.1	gi|289596752|ref|YP_003483448.1|	-	0.00024	20.1	0.4	0.00039	19.5	0.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596752|ref|YP_003483448.1|	-	0.004	16.8	4.1	0.012	15.3	2.9	1.8	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.5	gi|289596752|ref|YP_003483448.1|	-	0.0084	16.0	0.3	0.023	14.6	0.2	1.7	1	0	0	1	1	1	1	Zinc	ribbon	domain
DUF4379	PF14311.1	gi|289596752|ref|YP_003483448.1|	-	0.014	15.1	1.3	0.029	14.1	0.9	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
YhfH	PF14149.1	gi|289596752|ref|YP_003483448.1|	-	0.027	14.2	5.5	4.4	7.1	0.2	3.4	3	0	0	3	3	3	0	YhfH-like	protein
RNHCP	PF12647.2	gi|289596752|ref|YP_003483448.1|	-	0.031	14.1	0.1	0.054	13.3	0.1	1.3	1	0	0	1	1	1	0	RNHCP	domain
DZR	PF12773.2	gi|289596752|ref|YP_003483448.1|	-	0.033	14.0	0.5	0.066	13.0	0.4	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|289596752|ref|YP_003483448.1|	-	0.053	13.8	0.2	0.11	12.8	0.1	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-TFIIB	PF13453.1	gi|289596752|ref|YP_003483448.1|	-	0.067	12.3	3.5	0.14	11.3	2.4	1.6	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
zinc_ribbon_2	PF13240.1	gi|289596752|ref|YP_003483448.1|	-	0.069	12.6	4.5	0.4	10.2	3.1	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|289596752|ref|YP_003483448.1|	-	0.098	12.3	1.0	0.27	10.9	0.7	1.7	1	1	0	1	1	1	0	Nudix	N-terminal
DUF2256	PF10013.4	gi|289596752|ref|YP_003483448.1|	-	0.12	12.1	0.9	0.69	9.7	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Rubredoxin	PF00301.15	gi|289596752|ref|YP_003483448.1|	-	0.15	11.9	3.6	1.1	9.2	0.2	2.4	2	0	0	2	2	2	0	Rubredoxin
OrfB_Zn_ribbon	PF07282.6	gi|289596752|ref|YP_003483448.1|	-	0.54	9.9	1.8	0.76	9.4	0.2	2.0	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Rad50_zn_hook	PF04423.9	gi|289596752|ref|YP_003483448.1|	-	0.93	9.0	6.1	0.62	9.5	0.0	3.4	3	1	1	4	4	3	0	Rad50	zinc	hook	motif
Archease	PF01951.11	gi|289596753|ref|YP_003483449.1|	-	8.1e-41	139.1	0.1	9e-41	139.0	0.0	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
HAD_2	PF13419.1	gi|289596755|ref|YP_003483451.1|	-	6.6e-20	72.0	0.0	8.2e-20	71.7	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|289596755|ref|YP_003483451.1|	-	1.1e-08	35.7	0.0	2.7e-06	27.9	0.0	2.2	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|289596755|ref|YP_003483451.1|	-	3.1e-06	26.7	0.0	5.9e-06	25.8	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|289596755|ref|YP_003483451.1|	-	5e-05	23.5	0.0	7.2e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.7	gi|289596755|ref|YP_003483451.1|	-	0.0093	15.1	0.0	0.029	13.5	0.0	1.7	2	0	0	2	2	2	1	Putative	Phosphatase
ATE_C	PF04377.10	gi|289596755|ref|YP_003483451.1|	-	0.027	14.5	0.0	0.11	12.5	0.0	1.7	1	1	0	1	1	1	0	Arginine-tRNA-protein	transferase,	C	terminus
HTH_45	PF14947.1	gi|289596756|ref|YP_003483452.1|	-	2.9e-05	23.8	0.3	7.9e-05	22.4	0.2	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.2	gi|289596756|ref|YP_003483452.1|	-	0.0021	17.6	0.0	0.0034	17.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Skp1	PF01466.14	gi|289596756|ref|YP_003483452.1|	-	0.03	14.3	0.0	0.072	13.1	0.0	1.6	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
GerE	PF00196.14	gi|289596756|ref|YP_003483452.1|	-	0.064	12.5	0.2	0.15	11.4	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
RPA_C	PF08784.6	gi|289596756|ref|YP_003483452.1|	-	0.11	12.9	0.1	0.19	12.1	0.1	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_27	PF13463.1	gi|289596756|ref|YP_003483452.1|	-	0.12	12.7	0.1	0.24	11.7	0.1	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Response_reg	PF00072.19	gi|289596757|ref|YP_003483453.1|	-	1.3e-28	99.2	1.9	1.7e-28	98.8	0.9	1.5	2	0	0	2	2	2	1	Response	regulator	receiver	domain
Glyco_trans_1_2	PF13524.1	gi|289596757|ref|YP_003483453.1|	-	0.0054	16.9	0.1	0.016	15.4	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
OKR_DC_1_N	PF03709.10	gi|289596757|ref|YP_003483453.1|	-	0.0055	16.7	0.3	0.015	15.3	0.1	1.9	2	0	0	2	2	2	1	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
DHQS	PF01959.11	gi|289596757|ref|YP_003483453.1|	-	0.021	13.5	1.5	0.049	12.3	1.1	1.5	1	1	1	2	2	2	0	3-dehydroquinate	synthase	(EC	4.6.1.3)
B12-binding	PF02310.14	gi|289596757|ref|YP_003483453.1|	-	0.035	13.9	0.1	0.068	13.0	0.1	1.5	1	0	0	1	1	1	0	B12	binding	domain
LAGLIDADG_WhiA	PF14527.1	gi|289596757|ref|YP_003483453.1|	-	0.038	13.8	2.6	0.39	10.6	0.2	2.7	2	2	0	2	2	2	0	WhiA	LAGLIDADG-like	domain
Cas_APE2256	PF09651.5	gi|289596757|ref|YP_003483453.1|	-	0.054	13.2	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
Cons_hypoth95	PF03602.10	gi|289596757|ref|YP_003483453.1|	-	0.058	12.7	0.5	0.095	12.0	0.1	1.5	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
LAGLIDADG_3	PF14528.1	gi|289596757|ref|YP_003483453.1|	-	0.097	12.9	0.2	0.23	11.7	0.1	1.7	1	0	0	1	1	1	0	LAGLIDADG-like	domain
DXP_reductoisom	PF02670.11	gi|289596757|ref|YP_003483453.1|	-	0.14	12.6	0.8	1.1	9.7	0.6	2.1	1	1	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Pathogen_betaC1	PF09593.5	gi|289596757|ref|YP_003483453.1|	-	0.22	11.2	3.0	4.4	7.0	0.0	2.5	1	1	1	2	2	2	0	Beta-satellite	pathogenicity	beta	C1	protein
Radical_SAM	PF04055.16	gi|289596758|ref|YP_003483454.1|	-	1.1e-12	48.4	0.0	1.9e-12	47.6	0.0	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|289596758|ref|YP_003483454.1|	-	4.9e-07	29.5	4.8	0.013	15.0	0.0	2.6	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF1848)
RuBisCO_large	PF00016.15	gi|289596759|ref|YP_003483455.1|	-	7.2e-87	291.1	0.4	8.7e-87	290.8	0.3	1.1	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
RuBisCO_large_N	PF02788.11	gi|289596759|ref|YP_003483455.1|	-	7.5e-26	90.2	0.0	4e-25	87.9	0.0	2.1	2	0	0	2	2	2	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
Radical_SAM	PF04055.16	gi|289596760|ref|YP_003483456.1|	-	3e-19	69.8	0.1	1.6e-18	67.4	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|289596760|ref|YP_003483456.1|	-	3.6e-07	30.0	0.2	1.4e-06	28.2	0.1	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|289596760|ref|YP_003483456.1|	-	0.0073	16.4	0.0	0.033	14.3	0.0	2.0	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|289596760|ref|YP_003483456.1|	-	0.037	14.1	0.0	0.1	12.7	0.0	1.8	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
NUDIX	PF00293.23	gi|289596761|ref|YP_003483457.1|	-	4.6e-20	71.6	0.0	8.1e-20	70.8	0.0	1.4	2	0	0	2	2	2	1	NUDIX	domain
HTH_1	PF00126.22	gi|289596761|ref|YP_003483457.1|	-	3.1e-09	36.4	0.0	5.4e-09	35.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
KH_1	PF00013.24	gi|289596761|ref|YP_003483457.1|	-	0.0075	15.9	1.7	1.9	8.1	0.1	2.7	3	0	0	3	3	3	2	KH	domain
HTH_28	PF13518.1	gi|289596761|ref|YP_003483457.1|	-	0.021	14.8	0.2	0.044	13.7	0.2	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|289596761|ref|YP_003483457.1|	-	0.026	14.3	0.2	0.051	13.3	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix
KH_5	PF13184.1	gi|289596762|ref|YP_003483458.1|	-	2.9e-11	43.0	1.1	2.9e-11	43.0	0.7	1.5	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_2	PF07650.12	gi|289596762|ref|YP_003483458.1|	-	3.9e-08	32.7	1.4	0.0011	18.5	0.2	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|289596762|ref|YP_003483458.1|	-	5.2e-05	22.7	0.1	0.00011	21.7	0.0	1.5	1	0	0	1	1	1	1	KH	domain
DUF447	PF04289.7	gi|289596762|ref|YP_003483458.1|	-	0.019	14.5	0.2	0.036	13.6	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
Ribosomal_L7Ae	PF01248.21	gi|289596763|ref|YP_003483459.1|	-	1.5e-17	62.8	0.2	3.4e-17	61.7	0.2	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
eRF1_3	PF03465.10	gi|289596763|ref|YP_003483459.1|	-	0.0019	18.4	0.0	0.0019	18.4	0.0	1.1	1	0	0	1	1	1	1	eRF1	domain	3
RNA_pol_Rpb1_5	PF04998.12	gi|289596764|ref|YP_003483460.1|	-	4.6e-52	176.9	7.3	9.1e-52	176.0	5.0	1.6	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_1	PF04997.7	gi|289596765|ref|YP_003483461.1|	-	3.6e-93	312.4	1.8	2.6e-91	306.4	1.3	2.3	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|289596765|ref|YP_003483461.1|	-	1.5e-64	216.9	0.0	2.5e-64	216.2	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|289596765|ref|YP_003483461.1|	-	5.7e-30	104.1	0.0	2e-29	102.3	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_5	PF04998.12	gi|289596765|ref|YP_003483461.1|	-	1.5e-29	103.1	0.1	2.9e-29	102.2	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_4	PF05000.12	gi|289596765|ref|YP_003483461.1|	-	4.2e-29	100.4	0.0	8.8e-29	99.4	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
DUF3659	PF12396.3	gi|289596765|ref|YP_003483461.1|	-	0.0051	16.4	0.3	0.015	14.9	0.2	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3659)
zf-ribbon_3	PF13248.1	gi|289596765|ref|YP_003483461.1|	-	0.18	11.0	3.8	0.37	10.0	0.4	2.7	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596765|ref|YP_003483461.1|	-	9.9	5.7	8.3	1.3	8.5	0.1	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
RNA_pol_Rpb2_6	PF00562.23	gi|289596766|ref|YP_003483462.1|	-	8.3e-128	426.3	0.0	1.4e-127	425.6	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|289596766|ref|YP_003483462.1|	-	1.6e-37	128.4	0.0	3.8e-35	120.6	0.0	2.2	1	1	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|289596766|ref|YP_003483462.1|	-	1.8e-31	109.0	0.9	1.8e-31	109.0	0.6	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_3	PF04565.11	gi|289596766|ref|YP_003483462.1|	-	5.2e-25	86.9	0.0	1e-24	86.0	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_7	PF04560.15	gi|289596766|ref|YP_003483462.1|	-	1.6e-23	82.7	0.0	4.2e-23	81.3	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.8	gi|289596766|ref|YP_003483462.1|	-	4.3e-22	77.6	0.8	1.8e-21	75.7	0.6	2.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|289596766|ref|YP_003483462.1|	-	1.8e-18	66.1	0.4	4.2e-18	65.0	0.3	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
IBR	PF01485.16	gi|289596766|ref|YP_003483462.1|	-	0.0047	16.7	0.3	2.6	7.9	0.0	2.4	2	0	0	2	2	2	1	IBR	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596766|ref|YP_003483462.1|	-	0.0047	16.7	1.5	2	8.2	0.3	2.7	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
Terminase_GpA	PF05876.7	gi|289596766|ref|YP_003483462.1|	-	0.012	14.0	0.5	0.021	13.1	0.4	1.3	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
OrfB_Zn_ribbon	PF07282.6	gi|289596766|ref|YP_003483462.1|	-	0.031	13.9	4.1	0.96	9.1	0.1	2.6	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.1	gi|289596766|ref|YP_003483462.1|	-	0.14	11.8	5.3	4	7.2	0.1	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|289596766|ref|YP_003483462.1|	-	0.14	12.2	5.5	10	6.2	0.2	3.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_5	PF13719.1	gi|289596766|ref|YP_003483462.1|	-	0.14	11.7	5.7	3.1	7.4	0.1	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289596766|ref|YP_003483462.1|	-	0.14	12.0	5.1	20	5.2	0.2	3.5	3	0	0	3	3	3	0	Zinc	ribbon	domain
gpD	PF02925.11	gi|289596766|ref|YP_003483462.1|	-	0.17	11.6	0.1	0.58	9.9	0.0	1.8	2	0	0	2	2	2	0	Bacteriophage	scaffolding	protein	D
TF_Zn_Ribbon	PF08271.7	gi|289596766|ref|YP_003483462.1|	-	0.35	10.2	8.6	0.3	10.4	0.9	3.3	3	0	0	3	3	3	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|289596766|ref|YP_003483462.1|	-	0.39	10.5	3.8	0.61	9.9	0.2	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|289596766|ref|YP_003483462.1|	-	0.57	9.7	2.6	0.95	9.0	0.2	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|289596766|ref|YP_003483462.1|	-	1.1	9.6	5.6	1.7	9.0	0.3	2.8	2	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
DUF164	PF02591.10	gi|289596766|ref|YP_003483462.1|	-	3.1	7.6	4.9	4.8	7.0	0.0	3.1	3	0	0	3	3	3	0	Putative	zinc	ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|289596766|ref|YP_003483462.1|	-	3.5	7.9	13.2	21	5.4	0.0	4.8	5	1	1	6	6	4	0	Recombinase	zinc	beta	ribbon	domain
RNA_pol_Rpb5_C	PF01191.14	gi|289596767|ref|YP_003483463.1|	-	9.4e-26	89.2	1.0	1.1e-25	88.9	0.7	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
ATP_bind_4	PF01902.12	gi|289596768|ref|YP_003483464.1|	-	6.3e-69	231.6	0.6	7.7e-69	231.3	0.4	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|289596768|ref|YP_003483464.1|	-	3.9e-05	23.0	0.0	6.5e-05	22.3	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|289596768|ref|YP_003483464.1|	-	0.00033	20.1	0.0	0.00063	19.2	0.0	1.6	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.14	gi|289596768|ref|YP_003483464.1|	-	0.068	12.9	0.1	0.24	11.2	0.0	2.0	2	1	0	2	2	2	0	Phosphoadenosine	phosphosulfate	reductase	family
tRNA_Me_trans	PF03054.11	gi|289596768|ref|YP_003483464.1|	-	0.086	11.3	0.0	0.11	10.9	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
DAGK_prokar	PF01219.14	gi|289596769|ref|YP_003483465.1|	-	9.7e-29	99.0	5.2	1.1e-28	98.8	3.6	1.0	1	0	0	1	1	1	1	Prokaryotic	diacylglycerol	kinase
Sec7_N	PF12783.2	gi|289596769|ref|YP_003483465.1|	-	0.02	14.3	0.1	0.032	13.6	0.0	1.4	1	1	0	1	1	1	0	Guanine	nucleotide	exchange	factor	in	Golgi	transport	N-terminal
CreD	PF06123.7	gi|289596769|ref|YP_003483465.1|	-	0.22	9.9	1.4	0.29	9.6	1.0	1.1	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
DUF2892	PF11127.3	gi|289596769|ref|YP_003483465.1|	-	5.2	6.9	6.2	1.7	8.5	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2892)
Wzy_C	PF04932.10	gi|289596769|ref|YP_003483465.1|	-	8.4	6.1	7.6	18	5.0	5.2	1.6	1	1	0	1	1	1	0	O-Antigen	ligase
EamA	PF00892.15	gi|289596770|ref|YP_003483466.1|	-	5.2e-32	110.5	40.6	9.3e-19	67.7	10.0	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|289596770|ref|YP_003483466.1|	-	5.2e-09	36.3	29.5	9e-09	35.5	6.4	3.0	2	1	1	3	3	3	2	Multidrug	resistance	efflux	transporter
DUF4181	PF13789.1	gi|289596770|ref|YP_003483466.1|	-	0.00077	19.3	3.1	0.00077	19.3	2.1	3.5	2	2	2	4	4	4	2	Domain	of	unknown	function	(DUF4181)
PMT_2	PF13231.1	gi|289596771|ref|YP_003483467.1|	-	0.0033	17.3	2.7	0.0036	17.1	1.9	1.2	1	0	0	1	1	1	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF2583	PF10762.4	gi|289596771|ref|YP_003483467.1|	-	0.012	15.7	3.9	0.015	15.4	2.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2583)
DUF3784	PF12650.2	gi|289596771|ref|YP_003483467.1|	-	0.13	12.2	4.7	0.16	11.9	3.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3784)
Borrelia_P13	PF05628.7	gi|289596771|ref|YP_003483467.1|	-	0.17	11.7	5.4	0.2	11.4	3.8	1.1	1	0	0	1	1	1	0	Borrelia	membrane	protein	P13
FAM70	PF14967.1	gi|289596771|ref|YP_003483467.1|	-	0.21	10.7	7.2	0.25	10.5	5.0	1.0	1	0	0	1	1	1	0	FAM70	protein
Cg6151-P	PF10233.4	gi|289596771|ref|YP_003483467.1|	-	1	9.3	7.9	1.3	9.0	5.5	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	CG6151-P
DUF4097	PF13349.1	gi|289596771|ref|YP_003483467.1|	-	2.9	7.4	10.7	0.34	10.4	0.8	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
DUF1805	PF08827.6	gi|289596772|ref|YP_003483468.1|	-	3e-20	71.7	0.0	4.2e-20	71.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1805)
THUMP	PF02926.12	gi|289596773|ref|YP_003483469.1|	-	4.7e-05	23.3	1.4	0.0002	21.2	0.9	1.9	1	1	0	1	1	1	1	THUMP	domain
DUF387	PF04079.11	gi|289596774|ref|YP_003483470.1|	-	1.3e-39	135.1	0.7	1.5e-39	134.9	0.5	1.0	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
TrmB	PF01978.14	gi|289596774|ref|YP_003483470.1|	-	0.00052	19.6	1.6	0.16	11.6	0.0	2.4	2	1	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|289596774|ref|YP_003483470.1|	-	0.00089	18.9	0.1	1.1	8.9	0.0	2.8	2	1	0	2	2	2	2	MarR	family
HTH_20	PF12840.2	gi|289596774|ref|YP_003483470.1|	-	0.014	15.1	0.0	0.9	9.3	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
UPF0175	PF03683.8	gi|289596774|ref|YP_003483470.1|	-	0.043	13.2	0.1	0.097	12.1	0.0	1.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0175)
GARS_A	PF01071.14	gi|289596775|ref|YP_003483471.1|	-	1.9e-62	210.2	0.4	3.1e-62	209.5	0.3	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|289596775|ref|YP_003483471.1|	-	1.6e-27	95.9	0.1	5.1e-27	94.2	0.0	1.9	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|289596775|ref|YP_003483471.1|	-	3.4e-18	65.5	0.6	7.7e-18	64.4	0.4	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|289596775|ref|YP_003483471.1|	-	2.5e-14	53.4	0.0	6.7e-14	52.0	0.0	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|289596775|ref|YP_003483471.1|	-	2.2e-07	29.9	0.0	8.5e-06	24.7	0.0	2.1	2	0	0	2	2	2	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|289596775|ref|YP_003483471.1|	-	8.2e-07	29.0	0.0	0.00023	21.0	0.0	2.9	2	1	0	2	2	2	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|289596775|ref|YP_003483471.1|	-	0.015	14.6	0.1	0.034	13.5	0.0	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
ATPgrasp_ST	PF14397.1	gi|289596775|ref|YP_003483471.1|	-	0.021	13.9	0.2	0.23	10.5	0.0	2.1	2	0	0	2	2	2	0	Sugar-transfer	associated	ATP-grasp
MGS	PF02142.17	gi|289596775|ref|YP_003483471.1|	-	0.03	14.2	0.3	1.2	9.1	0.0	3.3	4	0	0	4	4	4	0	MGS-like	domain
GSH-S_ATP	PF02955.11	gi|289596775|ref|YP_003483471.1|	-	0.034	13.2	0.2	0.12	11.4	0.0	2.1	3	0	0	3	3	3	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
DUF2007	PF09413.5	gi|289596775|ref|YP_003483471.1|	-	0.091	12.5	0.1	22	4.9	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF2007)
PhosphMutase	PF10143.4	gi|289596776|ref|YP_003483472.1|	-	5.1e-63	211.8	0.0	7.5e-63	211.2	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|289596776|ref|YP_003483472.1|	-	1.1e-51	175.7	0.0	1.2e-51	175.4	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|289596776|ref|YP_003483472.1|	-	5.8e-09	35.7	0.1	9.7e-08	31.7	0.0	2.2	2	1	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.15	gi|289596776|ref|YP_003483472.1|	-	4.3e-06	25.6	0.0	6.8e-06	25.0	0.0	1.2	1	0	0	1	1	1	1	Alkaline	phosphatase
DUF77	PF01910.12	gi|289596777|ref|YP_003483473.1|	-	6.2e-27	93.1	0.4	6.9e-27	92.9	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
ERCC4	PF02732.10	gi|289596778|ref|YP_003483474.1|	-	2.2e-26	92.3	0.1	7.1e-26	90.6	0.1	2.0	1	0	0	1	1	1	1	ERCC4	domain
DEAD	PF00270.24	gi|289596778|ref|YP_003483474.1|	-	1.6e-24	86.2	1.2	2.6e-23	82.3	0.2	2.5	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|289596778|ref|YP_003483474.1|	-	4.7e-21	74.4	0.0	1.6e-20	72.7	0.0	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|289596778|ref|YP_003483474.1|	-	2.3e-18	66.6	0.0	7.6e-18	64.9	0.0	1.9	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.1	gi|289596778|ref|YP_003483474.1|	-	2.3e-09	37.2	0.0	1.3e-08	34.8	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|289596778|ref|YP_003483474.1|	-	4.5e-09	36.0	0.1	2.6e-08	33.6	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
SNF2_N	PF00176.18	gi|289596778|ref|YP_003483474.1|	-	4e-07	29.1	1.6	2.9e-06	26.3	0.1	2.4	2	1	0	2	2	2	1	SNF2	family	N-terminal	domain
HHH	PF00633.18	gi|289596778|ref|YP_003483474.1|	-	4e-05	23.0	0.1	0.00015	21.3	0.1	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF2075	PF09848.4	gi|289596778|ref|YP_003483474.1|	-	0.00064	18.8	0.0	0.0021	17.1	0.0	1.8	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_pol_A_CTD	PF03118.10	gi|289596778|ref|YP_003483474.1|	-	0.01	15.2	0.0	0.029	13.7	0.0	1.8	1	0	0	1	1	1	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
Flavi_DEAD	PF07652.9	gi|289596778|ref|YP_003483474.1|	-	0.033	13.9	0.1	0.13	11.9	0.0	2.1	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
AAA_11	PF13086.1	gi|289596778|ref|YP_003483474.1|	-	0.32	10.5	0.0	0.32	10.5	0.0	3.1	2	2	1	3	3	3	0	AAA	domain
MFS_1	PF07690.11	gi|289596779|ref|YP_003483475.1|	-	1.2e-14	53.8	39.5	1.1e-08	34.1	11.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Fe_dep_repress	PF01325.14	gi|289596780|ref|YP_003483476.1|	-	1.7e-21	75.8	3.0	2.9e-21	75.1	2.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.10	gi|289596780|ref|YP_003483476.1|	-	9.7e-16	57.2	0.2	1.9e-15	56.3	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
MarR_2	PF12802.2	gi|289596780|ref|YP_003483476.1|	-	1.2e-05	24.9	0.0	2.2e-05	24.0	0.0	1.5	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|289596780|ref|YP_003483476.1|	-	2.5e-05	23.8	0.0	6.1e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|289596780|ref|YP_003483476.1|	-	6.7e-05	22.1	0.0	0.00014	21.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289596780|ref|YP_003483476.1|	-	9.5e-05	22.0	0.3	0.00018	21.1	0.2	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|289596780|ref|YP_003483476.1|	-	0.0002	21.6	0.4	0.00043	20.5	0.0	1.8	2	1	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|289596780|ref|YP_003483476.1|	-	0.00026	20.7	1.1	0.00048	19.8	0.7	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
Topoisom_bac	PF01131.15	gi|289596780|ref|YP_003483476.1|	-	0.00037	19.4	0.2	0.00049	19.0	0.2	1.3	1	1	0	1	1	1	1	DNA	topoisomerase
HTH_IclR	PF09339.5	gi|289596780|ref|YP_003483476.1|	-	0.00089	18.7	0.0	0.0019	17.7	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|289596780|ref|YP_003483476.1|	-	0.0012	18.6	0.0	0.0032	17.2	0.0	1.7	1	1	1	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_Crp_2	PF13545.1	gi|289596780|ref|YP_003483476.1|	-	0.0021	17.8	0.0	0.0041	16.8	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
EAP30	PF04157.11	gi|289596780|ref|YP_003483476.1|	-	0.0033	16.6	0.0	0.0061	15.7	0.0	1.4	2	0	0	2	2	2	1	EAP30/Vps36	family
TFIIE_alpha	PF02002.12	gi|289596780|ref|YP_003483476.1|	-	0.0051	16.2	0.9	0.0083	15.6	0.3	1.7	1	1	0	1	1	1	1	TFIIE	alpha	subunit
GntR	PF00392.16	gi|289596780|ref|YP_003483476.1|	-	0.0067	15.8	0.0	0.015	14.6	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_11	PF08279.7	gi|289596780|ref|YP_003483476.1|	-	0.0075	15.8	0.1	0.027	14.1	0.0	1.9	2	0	0	2	2	2	1	HTH	domain
Rrf2	PF02082.15	gi|289596780|ref|YP_003483476.1|	-	0.0075	16.3	0.0	0.044	13.8	0.0	2.2	1	1	1	2	2	2	1	Transcriptional	regulator
HTH_10	PF04967.7	gi|289596780|ref|YP_003483476.1|	-	0.0077	15.7	0.1	0.043	13.3	0.0	2.2	2	1	1	3	3	3	1	HTH	DNA	binding	domain
SecA_PP_bind	PF01043.15	gi|289596780|ref|YP_003483476.1|	-	0.0079	16.5	0.2	0.014	15.7	0.1	1.5	1	1	0	1	1	1	1	SecA	preprotein	cross-linking	domain
EspG	PF06872.6	gi|289596780|ref|YP_003483476.1|	-	0.0089	14.4	0.0	0.0099	14.2	0.0	1.1	1	0	0	1	1	1	1	EspG	protein
HTH_5	PF01022.15	gi|289596780|ref|YP_003483476.1|	-	0.0096	15.5	0.0	0.043	13.4	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
FeoC	PF09012.5	gi|289596780|ref|YP_003483476.1|	-	0.011	15.3	0.1	0.025	14.2	0.0	1.6	2	0	0	2	2	1	0	FeoC	like	transcriptional	regulator
DUF2100	PF09873.4	gi|289596780|ref|YP_003483476.1|	-	0.037	13.4	2.4	0.043	13.2	1.7	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
Phage_terminase	PF10668.4	gi|289596780|ref|YP_003483476.1|	-	0.038	13.7	0.1	0.19	11.5	0.0	2.0	2	0	0	2	2	2	0	Phage	terminase	small	subunit
YjcQ	PF09639.5	gi|289596780|ref|YP_003483476.1|	-	0.055	13.5	0.8	1.2	9.2	0.1	2.3	1	1	1	2	2	2	0	YjcQ	protein
RNA_pol_Rpb1_6	PF04992.9	gi|289596780|ref|YP_003483476.1|	-	0.061	13.0	0.1	0.07	12.8	0.1	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	6
CobN-Mg_chel	PF02514.11	gi|289596780|ref|YP_003483476.1|	-	0.067	10.5	0.0	0.067	10.5	0.0	1.1	1	0	0	1	1	1	0	CobN/Magnesium	Chelatase
Mnd1	PF03962.10	gi|289596780|ref|YP_003483476.1|	-	0.069	12.8	0.7	0.11	12.1	0.1	1.7	2	0	0	2	2	2	0	Mnd1	family
HTH_DeoR	PF08220.7	gi|289596780|ref|YP_003483476.1|	-	0.1	12.1	0.0	1.2	8.7	0.0	2.5	2	1	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.10	gi|289596780|ref|YP_003483476.1|	-	0.18	11.2	0.8	1.4	8.4	0.1	2.1	1	1	1	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
IF2_N	PF04760.10	gi|289596780|ref|YP_003483476.1|	-	0.35	10.5	3.3	1.2	8.8	0.1	3.1	3	1	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
Sigma70_r1_1	PF03979.9	gi|289596780|ref|YP_003483476.1|	-	1.2	9.1	4.7	0.49	10.3	0.6	2.2	1	1	1	2	2	2	0	Sigma-70	factor,	region	1.1
BPL_LplA_LipB	PF03099.14	gi|289596781|ref|YP_003483477.1|	-	4.6e-23	81.5	0.0	6.9e-23	81.0	0.0	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
YqzH	PF14164.1	gi|289596781|ref|YP_003483477.1|	-	0.091	12.6	0.1	13	5.7	0.1	3.2	3	1	0	3	3	3	0	YqzH-like	protein
Lip_prot_lig_C	PF10437.4	gi|289596782|ref|YP_003483478.1|	-	1.9e-05	24.2	0.2	2.4e-05	23.9	0.1	1.3	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
Nol1_Nop2_Fmu	PF01189.12	gi|289596783|ref|YP_003483479.1|	-	2.6e-55	187.8	0.0	2.9e-55	187.6	0.0	1.0	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|289596783|ref|YP_003483479.1|	-	7.3e-09	35.3	0.0	1.1e-08	34.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|289596783|ref|YP_003483479.1|	-	2e-05	24.0	0.0	3e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|289596783|ref|YP_003483479.1|	-	7.3e-05	23.3	0.0	0.00011	22.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289596783|ref|YP_003483479.1|	-	0.0088	16.0	0.0	0.013	15.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|289596783|ref|YP_003483479.1|	-	0.0089	15.5	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Ubie_methyltran	PF01209.13	gi|289596783|ref|YP_003483479.1|	-	0.011	14.8	0.8	0.045	12.8	0.0	2.1	3	0	0	3	3	3	0	ubiE/COQ5	methyltransferase	family
FtsJ	PF01728.14	gi|289596783|ref|YP_003483479.1|	-	0.011	15.7	0.0	0.014	15.4	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
RrnaAD	PF00398.15	gi|289596783|ref|YP_003483479.1|	-	0.018	14.0	0.0	0.024	13.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Nol1_Nop2_Fmu_2	PF13636.1	gi|289596784|ref|YP_003483480.1|	-	1.2e-14	54.1	0.0	1.7e-14	53.7	0.0	1.2	1	0	0	1	1	1	1	pre-rRNA	processing	and	ribosome	biogenesis
ThiI	PF02568.9	gi|289596785|ref|YP_003483481.1|	-	1.5e-59	200.8	0.1	2.2e-59	200.2	0.0	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|289596785|ref|YP_003483481.1|	-	5.7e-21	74.9	1.5	5.7e-21	74.9	1.0	2.0	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.8	gi|289596785|ref|YP_003483481.1|	-	1.5e-05	24.3	0.1	0.00022	20.5	0.1	2.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|289596785|ref|YP_003483481.1|	-	4.6e-05	22.1	0.0	9.6e-05	21.0	0.0	1.6	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|289596785|ref|YP_003483481.1|	-	0.00018	21.0	0.1	0.00045	19.7	0.0	1.6	1	1	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.14	gi|289596785|ref|YP_003483481.1|	-	0.00032	20.5	0.0	0.0054	16.5	0.0	2.1	2	0	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.12	gi|289596785|ref|YP_003483481.1|	-	0.0011	17.9	0.0	0.0018	17.2	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
DUF4125	PF13526.1	gi|289596785|ref|YP_003483481.1|	-	0.017	14.6	0.1	0.088	12.3	0.0	2.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4125)
PCI_Csn8	PF10075.4	gi|289596785|ref|YP_003483481.1|	-	0.15	11.8	0.1	0.87	9.3	0.0	2.1	2	0	0	2	2	2	0	COP9	signalosome,	subunit	CSN8
Peptidase_C9	PF01707.11	gi|289596787|ref|YP_003483483.1|	-	0.026	14.1	0.1	0.039	13.5	0.1	1.3	1	0	0	1	1	1	0	Peptidase	family	C9
SSF	PF00474.12	gi|289596788|ref|YP_003483484.1|	-	1.5e-80	270.8	26.1	2.5e-80	270.1	18.1	1.3	1	0	0	1	1	1	1	Sodium:solute	symporter	family
AA_permease_C	PF13906.1	gi|289596789|ref|YP_003483485.1|	-	0.0012	18.6	1.1	0.0017	18.1	0.8	1.2	1	0	0	1	1	1	1	C-terminus	of	AA_permease
AFOR_C	PF01314.13	gi|289596790|ref|YP_003483486.1|	-	3e-106	355.3	0.0	4.4e-104	348.2	0.0	2.1	1	1	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|289596790|ref|YP_003483486.1|	-	2.5e-78	262.0	0.3	1.3e-77	259.7	0.1	2.0	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DHHA1	PF02272.14	gi|289596791|ref|YP_003483487.1|	-	3.5e-17	61.8	1.8	4.3e-17	61.5	0.3	1.9	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.15	gi|289596791|ref|YP_003483487.1|	-	3.1e-13	49.6	0.4	1.4e-12	47.4	0.1	2.0	2	0	0	2	2	2	1	DHH	family
Toprim	PF01751.17	gi|289596791|ref|YP_003483487.1|	-	0.0016	18.3	0.1	0.017	15.0	0.1	2.5	2	1	0	2	2	2	1	Toprim	domain
eIF-5_eIF-2B	PF01873.12	gi|289596792|ref|YP_003483488.1|	-	4.9e-42	142.5	0.2	7.2e-42	141.9	0.1	1.2	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
TRAM	PF01938.15	gi|289596792|ref|YP_003483488.1|	-	3.2e-13	49.2	1.6	6.5e-13	48.2	1.1	1.5	1	0	0	1	1	1	1	TRAM	domain
TF_Zn_Ribbon	PF08271.7	gi|289596792|ref|YP_003483488.1|	-	0.001	18.3	1.0	0.002	17.4	0.7	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF35_N	PF12172.3	gi|289596792|ref|YP_003483488.1|	-	0.12	12.3	3.5	0.19	11.7	0.2	2.2	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
A2L_zn_ribbon	PF08792.5	gi|289596792|ref|YP_003483488.1|	-	0.13	11.7	0.4	3.1	7.3	0.0	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Fcf1	PF04900.7	gi|289596793|ref|YP_003483489.1|	-	1.7e-09	37.6	0.1	2.3e-09	37.2	0.0	1.1	1	0	0	1	1	1	1	Fcf1
PIN	PF01850.16	gi|289596793|ref|YP_003483489.1|	-	8.4e-05	22.8	0.1	0.00012	22.4	0.1	1.2	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|289596793|ref|YP_003483489.1|	-	0.00096	19.2	0.0	0.0033	17.5	0.0	1.8	1	1	0	1	1	1	1	PIN	domain
RNase_Zc3h12a	PF11977.3	gi|289596793|ref|YP_003483489.1|	-	0.021	14.6	0.0	0.026	14.3	0.0	1.3	1	0	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
SUD-M	PF11633.3	gi|289596793|ref|YP_003483489.1|	-	0.03	13.6	0.2	0.087	12.1	0.0	1.7	2	0	0	2	2	2	0	Single-stranded	poly(A)	binding	domain
UPF0278	PF08745.6	gi|289596793|ref|YP_003483489.1|	-	0.062	12.5	0.0	0.18	11.0	0.0	1.6	1	1	1	2	2	2	0	UPF0278	family
CTP-dep_RFKase	PF01982.11	gi|289596794|ref|YP_003483490.1|	-	2.1e-40	137.0	0.1	3.6e-40	136.3	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
MarR_2	PF12802.2	gi|289596794|ref|YP_003483490.1|	-	6.8e-05	22.4	0.0	0.00014	21.4	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|289596794|ref|YP_003483490.1|	-	0.00037	20.2	0.0	0.00065	19.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596794|ref|YP_003483490.1|	-	0.00062	19.1	0.0	0.0025	17.1	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|289596794|ref|YP_003483490.1|	-	0.0093	15.6	0.0	0.026	14.2	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|289596794|ref|YP_003483490.1|	-	0.0099	15.5	0.1	0.1	12.2	0.0	2.3	2	0	0	2	2	2	1	HTH	domain
HTH_1	PF00126.22	gi|289596794|ref|YP_003483490.1|	-	0.01	15.5	0.0	0.016	14.8	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_34	PF13601.1	gi|289596794|ref|YP_003483490.1|	-	0.018	15.0	0.1	0.16	11.9	0.0	2.5	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|289596794|ref|YP_003483490.1|	-	0.028	14.1	0.0	0.17	11.6	0.0	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_AsnC-type	PF13404.1	gi|289596794|ref|YP_003483490.1|	-	0.03	13.8	0.0	0.071	12.6	0.0	1.7	1	1	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_45	PF14947.1	gi|289596794|ref|YP_003483490.1|	-	0.073	12.9	0.0	0.16	11.8	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_36	PF13730.1	gi|289596794|ref|YP_003483490.1|	-	0.14	12.3	0.0	0.26	11.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
PyrI	PF01948.13	gi|289596795|ref|YP_003483491.1|	-	1.2e-33	115.0	4.8	1.2e-33	115.0	3.3	1.6	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|289596795|ref|YP_003483491.1|	-	3.1e-20	71.3	3.5	6.4e-20	70.3	2.4	1.6	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
RD3	PF14473.1	gi|289596795|ref|YP_003483491.1|	-	0.12	11.8	0.1	0.2	11.1	0.1	1.4	1	0	0	1	1	1	0	RD3	protein
OTCace_N	PF02729.16	gi|289596796|ref|YP_003483492.1|	-	3e-48	163.0	0.0	4e-47	159.4	0.0	2.1	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|289596796|ref|YP_003483492.1|	-	8.3e-42	142.7	0.0	1.2e-41	142.1	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Shikimate_DH	PF01488.15	gi|289596796|ref|YP_003483492.1|	-	0.0062	16.6	0.0	0.036	14.1	0.0	2.0	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
DHH	PF01368.15	gi|289596797|ref|YP_003483493.1|	-	1.2e-09	37.9	0.5	2.2e-09	37.1	0.3	1.4	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|289596797|ref|YP_003483493.1|	-	5.8e-08	32.3	0.1	1.3e-07	31.2	0.1	1.6	1	0	0	1	1	1	1	DHHA1	domain
Prefoldin_2	PF01920.15	gi|289596798|ref|YP_003483494.1|	-	1.3e-23	82.7	14.8	1.4e-23	82.6	10.3	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
Nsp1_C	PF05064.8	gi|289596798|ref|YP_003483494.1|	-	0.014	15.0	10.7	0.059	13.0	1.8	2.1	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
GAS	PF13851.1	gi|289596798|ref|YP_003483494.1|	-	0.063	12.4	19.9	0.25	10.5	2.7	2.0	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
FH2	PF02181.18	gi|289596798|ref|YP_003483494.1|	-	0.07	11.9	4.1	0.092	11.6	2.9	1.1	1	0	0	1	1	1	0	Formin	Homology	2	Domain
DUF489	PF04356.7	gi|289596798|ref|YP_003483494.1|	-	0.098	12.2	4.4	0.17	11.4	3.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF489)
Prefoldin	PF02996.12	gi|289596798|ref|YP_003483494.1|	-	0.11	12.1	14.7	0.04	13.5	3.4	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
Uds1	PF15456.1	gi|289596798|ref|YP_003483494.1|	-	0.12	12.3	5.8	0.17	11.8	4.1	1.2	1	0	0	1	1	1	0	Up-regulated	During	Septation
DUF390	PF04094.9	gi|289596798|ref|YP_003483494.1|	-	0.15	10.1	2.5	0.17	9.9	1.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF390)
CENP-F_leu_zip	PF10473.4	gi|289596798|ref|YP_003483494.1|	-	0.36	10.6	15.6	1.7	8.5	1.7	2.3	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TPR_MLP1_2	PF07926.7	gi|289596798|ref|YP_003483494.1|	-	0.38	10.4	18.8	1.9	8.2	2.0	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF2968	PF11180.3	gi|289596798|ref|YP_003483494.1|	-	0.42	9.9	10.3	1.5	8.1	0.8	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DUF4200	PF13863.1	gi|289596798|ref|YP_003483494.1|	-	0.44	10.5	18.1	0.99	9.3	6.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
FliD_C	PF07195.7	gi|289596798|ref|YP_003483494.1|	-	0.61	9.3	3.2	1.4	8.2	2.2	1.6	1	1	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
Syntaxin-6_N	PF09177.6	gi|289596798|ref|YP_003483494.1|	-	0.62	10.5	4.8	4.7	7.6	0.4	2.2	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
FlxA	PF14282.1	gi|289596798|ref|YP_003483494.1|	-	0.76	9.7	9.6	2.6	8.0	1.9	2.3	2	0	0	2	2	2	0	FlxA-like	protein
ADIP	PF11559.3	gi|289596798|ref|YP_003483494.1|	-	0.89	9.4	11.1	0.7	9.7	2.2	2.0	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Tektin	PF03148.9	gi|289596798|ref|YP_003483494.1|	-	1.2	7.6	10.4	0.76	8.2	1.4	2.1	2	0	0	2	2	2	0	Tektin	family
Bap31	PF05529.7	gi|289596798|ref|YP_003483494.1|	-	1.4	8.3	8.0	1.8	7.9	5.5	1.3	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
Spc24	PF08286.6	gi|289596798|ref|YP_003483494.1|	-	2.3	7.9	11.9	2.8	7.6	1.2	2.2	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
EIAV_Rev	PF11129.3	gi|289596798|ref|YP_003483494.1|	-	2.9	7.8	9.8	2.2	8.2	1.8	2.2	1	1	1	2	2	2	0	Rev	protein	of	equine	infectious	anaemia	virus
DUF4164	PF13747.1	gi|289596798|ref|YP_003483494.1|	-	3.4	7.8	12.6	0.22	11.6	0.9	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
Mod_r	PF07200.8	gi|289596798|ref|YP_003483494.1|	-	5.1	7.0	14.9	1.2	9.0	1.4	2.1	1	1	1	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
Ax_dynein_light	PF10211.4	gi|289596798|ref|YP_003483494.1|	-	5.4	6.8	13.1	1.2	8.9	3.9	2.1	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
DUF972	PF06156.8	gi|289596798|ref|YP_003483494.1|	-	6.7	7.1	11.6	52	4.2	8.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
FlaC_arch	PF05377.6	gi|289596798|ref|YP_003483494.1|	-	9.9	6.1	9.4	6.4	6.7	1.6	2.4	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Pcc1	PF09341.5	gi|289596799|ref|YP_003483495.1|	-	4.3e-12	45.8	0.0	5.4e-12	45.5	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF3240	PF11582.3	gi|289596799|ref|YP_003483495.1|	-	0.067	13.1	0.0	0.083	12.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3240)
polyprenyl_synt	PF00348.12	gi|289596800|ref|YP_003483496.1|	-	2.7e-57	193.5	0.0	3e-35	121.3	0.0	2.1	2	0	0	2	2	2	2	Polyprenyl	synthetase
Ribosomal_L15e	PF00827.12	gi|289596801|ref|YP_003483497.1|	-	1.9e-85	285.2	12.2	2.1e-85	285.0	8.4	1.0	1	0	0	1	1	1	1	Ribosomal	L15
DUF2874	PF11396.3	gi|289596801|ref|YP_003483497.1|	-	0.016	15.1	0.2	0.016	15.1	0.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2874)
DUF2074	PF09847.4	gi|289596802|ref|YP_003483498.1|	-	4.9e-65	220.0	67.3	5.6e-65	219.8	46.7	1.0	1	0	0	1	1	1	1	Predicted	permease	(DUF2074)
ABC2_membrane_5	PF13346.1	gi|289596802|ref|YP_003483498.1|	-	0.0016	17.7	32.2	0.0016	17.7	22.3	3.1	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|289596803|ref|YP_003483499.1|	-	8.9e-28	97.2	0.0	1.6e-27	96.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596803|ref|YP_003483499.1|	-	6.1e-16	59.2	1.3	3e-14	53.6	0.9	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|289596803|ref|YP_003483499.1|	-	7.9e-06	26.3	0.2	1.6e-05	25.3	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|289596803|ref|YP_003483499.1|	-	0.00072	19.0	0.1	0.51	9.7	0.0	2.3	2	0	0	2	2	2	2	AAA-like	domain
AAA_29	PF13555.1	gi|289596803|ref|YP_003483499.1|	-	0.00073	19.0	0.1	0.0014	18.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|289596803|ref|YP_003483499.1|	-	0.011	15.8	0.7	0.062	13.5	0.2	2.4	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|289596803|ref|YP_003483499.1|	-	0.035	13.1	3.1	0.48	9.4	0.0	2.5	2	1	1	3	3	3	0	AAA	ATPase	domain
SMC_N	PF02463.14	gi|289596803|ref|YP_003483499.1|	-	0.043	13.0	0.3	1	8.5	0.1	2.3	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
ArgK	PF03308.11	gi|289596803|ref|YP_003483499.1|	-	0.045	12.5	0.2	0.066	11.9	0.1	1.3	1	0	0	1	1	1	0	ArgK	protein
DUF258	PF03193.11	gi|289596803|ref|YP_003483499.1|	-	0.056	12.6	0.1	0.15	11.2	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|289596803|ref|YP_003483499.1|	-	0.062	13.4	0.5	0.65	10.1	0.2	2.3	1	1	1	2	2	2	0	AAA	domain
G-alpha	PF00503.15	gi|289596803|ref|YP_003483499.1|	-	0.082	11.5	0.0	0.11	11.1	0.0	1.4	1	1	0	1	1	1	0	G-protein	alpha	subunit
AAA_18	PF13238.1	gi|289596803|ref|YP_003483499.1|	-	0.091	13.0	1.6	1.1	9.5	0.4	2.7	1	1	1	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|289596803|ref|YP_003483499.1|	-	0.091	12.1	0.0	0.2	11.0	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|289596803|ref|YP_003483499.1|	-	0.093	13.5	2.1	0.21	12.3	0.3	2.4	1	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|289596803|ref|YP_003483499.1|	-	0.11	12.1	0.0	0.24	11.0	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
BCA_ABC_TP_C	PF12399.3	gi|289596803|ref|YP_003483499.1|	-	0.12	12.0	0.0	1.1	8.9	0.0	2.4	2	0	0	2	2	2	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
Peptidase_S9	PF00326.16	gi|289596804|ref|YP_003483500.1|	-	3.1e-58	196.4	0.0	4.6e-58	195.9	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S9_N	PF02897.10	gi|289596804|ref|YP_003483500.1|	-	9.5e-21	73.8	0.1	2.8e-20	72.3	0.1	1.7	1	1	0	1	1	1	1	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Abhydrolase_5	PF12695.2	gi|289596804|ref|YP_003483500.1|	-	3.5e-05	23.6	0.0	5.7e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|289596804|ref|YP_003483500.1|	-	0.0059	16.4	0.0	0.016	15.1	0.0	1.7	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|289596804|ref|YP_003483500.1|	-	0.025	13.9	0.0	0.85	8.9	0.0	2.2	1	1	1	2	2	2	0	X-Pro	dipeptidyl-peptidase	(S15	family)
Peroxin-22	PF12827.2	gi|289596804|ref|YP_003483500.1|	-	0.095	12.4	0.1	1.2	8.8	0.1	2.4	2	0	0	2	2	2	0	Peroxisomal	biogenesis	protein	family
Peptidase_S28	PF05577.7	gi|289596804|ref|YP_003483500.1|	-	0.16	10.4	0.0	0.26	9.7	0.0	1.2	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
HD	PF01966.17	gi|289596805|ref|YP_003483501.1|	-	3.5e-12	46.4	0.6	1.2e-11	44.7	0.4	2.1	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|289596805|ref|YP_003483501.1|	-	0.03	13.5	0.0	0.066	12.4	0.0	1.5	1	0	0	1	1	1	0	HDOD	domain
Cpn60_TCP1	PF00118.19	gi|289596806|ref|YP_003483502.1|	-	3e-173	576.9	16.4	3.4e-173	576.7	11.4	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TENA_THI-4	PF03070.11	gi|289596806|ref|YP_003483502.1|	-	0.14	11.8	0.1	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	TENA/THI-4/PQQC	family
SPOUT_MTase	PF02590.12	gi|289596807|ref|YP_003483503.1|	-	1.4e-23	83.3	0.3	8.5e-19	67.7	0.0	2.0	1	1	1	2	2	2	2	Predicted	SPOUT	methyltransferase
Radical_SAM	PF04055.16	gi|289596808|ref|YP_003483504.1|	-	1.4e-18	67.6	0.0	5e-18	65.8	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|289596808|ref|YP_003483504.1|	-	0.0024	17.7	0.0	0.0052	16.6	0.0	1.5	1	1	0	1	1	1	1	B12	binding	domain
TraB	PF01963.12	gi|289596809|ref|YP_003483505.1|	-	1.9e-20	73.3	6.1	1.7e-17	63.7	4.2	2.0	1	1	0	1	1	1	1	TraB	family
Scramblase	PF03803.10	gi|289596809|ref|YP_003483505.1|	-	0.0031	16.6	0.1	0.0049	15.9	0.0	1.3	1	0	0	1	1	1	1	Scramblase
T2SS-T3SS_pil_N	PF13629.1	gi|289596809|ref|YP_003483505.1|	-	0.083	12.4	0.1	0.2	11.2	0.0	1.6	1	0	0	1	1	1	0	Pilus	formation	protein	N	terminal	region
DUF2621	PF11084.3	gi|289596809|ref|YP_003483505.1|	-	0.13	11.8	1.4	0.34	10.5	0.2	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2621)
DUF2680	PF10925.3	gi|289596809|ref|YP_003483505.1|	-	0.21	11.4	0.1	0.21	11.4	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2680)
FTCD_N	PF07837.7	gi|289596810|ref|YP_003483506.1|	-	3.3e-78	261.2	0.1	1.2e-77	259.4	0.1	2.0	2	0	0	2	2	2	1	Formiminotransferase	domain,	N-terminal	subdomain
FTCD_C	PF04961.7	gi|289596810|ref|YP_003483506.1|	-	1.4e-68	229.9	4.0	2.7e-68	229.0	2.8	1.5	1	0	0	1	1	1	1	Formiminotransferase-cyclodeaminase
FTCD	PF02971.9	gi|289596810|ref|YP_003483506.1|	-	5.6e-40	136.3	0.0	1.1e-39	135.3	0.0	1.5	1	0	0	1	1	1	1	Formiminotransferase	domain
KH_1	PF00013.24	gi|289596810|ref|YP_003483506.1|	-	0.031	13.8	0.1	0.11	12.2	0.1	2.0	1	0	0	1	1	1	0	KH	domain
tRNA_SAD	PF07973.9	gi|289596811|ref|YP_003483507.1|	-	6.4e-12	45.1	0.1	1.5e-11	44.0	0.1	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|289596811|ref|YP_003483507.1|	-	7.5e-10	37.7	0.1	2.1e-09	36.2	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
ATP-synt_D	PF01813.12	gi|289596812|ref|YP_003483508.1|	-	5.3e-59	199.0	11.1	6.1e-59	198.8	7.7	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF1836	PF08876.6	gi|289596812|ref|YP_003483508.1|	-	0.067	12.9	0.4	2.1	8.1	0.0	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1836)
Orthopox_A47	PF06334.6	gi|289596812|ref|YP_003483508.1|	-	0.2	10.7	2.5	0.33	10.0	1.7	1.3	1	1	0	1	1	1	0	Orthopoxvirus	A47	protein
OMPdecase	PF00215.19	gi|289596814|ref|YP_003483510.1|	-	6.6e-40	136.9	3.2	8.4e-40	136.5	2.2	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.14	gi|289596814|ref|YP_003483510.1|	-	0.0048	16.0	1.5	0.011	14.9	1.0	1.5	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
PcrB	PF01884.12	gi|289596814|ref|YP_003483510.1|	-	0.0066	15.7	0.7	0.017	14.3	0.1	1.8	1	1	1	2	2	2	1	PcrB	family
PEP_mutase	PF13714.1	gi|289596814|ref|YP_003483510.1|	-	0.016	14.4	1.2	1	8.5	0.1	2.2	1	1	1	2	2	2	0	Phosphoenolpyruvate	phosphomutase
PA	PF02225.17	gi|289596814|ref|YP_003483510.1|	-	0.4	10.3	3.8	9.7	5.9	0.1	2.9	2	1	1	3	3	3	0	PA	domain
Lactamase_B_2	PF12706.2	gi|289596815|ref|YP_003483511.1|	-	2.7e-09	36.8	0.0	3.4e-09	36.5	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289596815|ref|YP_003483511.1|	-	1.1e-08	34.9	0.0	1.3e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
PadR	PF03551.9	gi|289596816|ref|YP_003483512.1|	-	4.7e-16	58.3	0.5	3.7e-15	55.4	0.1	2.1	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|289596816|ref|YP_003483512.1|	-	0.00012	21.8	2.3	0.00045	19.9	0.1	2.6	2	1	1	3	3	3	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|289596816|ref|YP_003483512.1|	-	0.0011	18.9	0.0	0.0021	18.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
YjcQ	PF09639.5	gi|289596816|ref|YP_003483512.1|	-	0.014	15.4	2.4	0.018	15.1	0.2	2.1	2	1	0	2	2	2	0	YjcQ	protein
Mrr_N	PF14338.1	gi|289596816|ref|YP_003483512.1|	-	0.025	14.6	0.7	0.27	11.3	0.0	2.2	2	0	0	2	2	2	0	Mrr	N-terminal	domain
Phe_tRNA-synt_N	PF02912.13	gi|289596816|ref|YP_003483512.1|	-	0.026	14.2	0.8	0.026	14.2	0.5	2.2	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
DUF1495	PF07381.6	gi|289596816|ref|YP_003483512.1|	-	0.04	13.6	0.0	0.099	12.3	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
RNA12	PF10443.4	gi|289596816|ref|YP_003483512.1|	-	0.055	11.9	0.9	0.29	9.5	0.4	1.8	1	1	1	2	2	2	0	RNA12	protein
DUF3243	PF11588.3	gi|289596816|ref|YP_003483512.1|	-	0.1	12.5	0.9	2.1	8.4	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3243)
HTH_27	PF13463.1	gi|289596816|ref|YP_003483512.1|	-	0.11	12.8	0.0	0.42	10.9	0.0	2.0	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.1	gi|289596816|ref|YP_003483512.1|	-	0.13	12.1	0.0	0.19	11.5	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
Ribosomal_S13	PF00416.17	gi|289596816|ref|YP_003483512.1|	-	0.16	12.4	3.2	3.9	7.9	2.2	2.5	1	1	0	1	1	1	0	Ribosomal	protein	S13/S18
DUF4364	PF14277.1	gi|289596816|ref|YP_003483512.1|	-	0.18	11.3	5.2	0.076	12.6	1.2	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4364)
BRCA-2_OB3	PF09104.5	gi|289596816|ref|YP_003483512.1|	-	0.18	11.5	0.8	0.88	9.3	0.1	2.0	1	1	2	3	3	3	0	BRCA2,	oligonucleotide/oligosaccharide-binding,	domain	3
Pneumovirus_M2	PF06436.6	gi|289596816|ref|YP_003483512.1|	-	0.87	8.7	4.0	2	7.6	1.0	2.0	1	1	1	2	2	2	0	Pneumovirus	matrix	protein	2	(M2)
MatE	PF01554.13	gi|289596817|ref|YP_003483513.1|	-	3.3e-62	208.8	37.5	1.1e-38	132.3	7.4	3.2	4	0	0	4	4	4	2	MatE
Polysacc_synt_C	PF14667.1	gi|289596817|ref|YP_003483513.1|	-	1.3e-08	34.8	26.3	1.3e-08	34.8	18.2	5.4	3	2	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF1144	PF06610.8	gi|289596817|ref|YP_003483513.1|	-	0.012	15.3	1.9	0.012	15.3	1.3	3.3	3	1	0	4	4	4	0	Protein	of	unknown	function	(DUF1144)
UPF0016	PF01169.14	gi|289596817|ref|YP_003483513.1|	-	0.013	15.5	0.6	0.013	15.5	0.4	5.1	4	1	1	6	6	6	0	Uncharacterized	protein	family	UPF0016
DUF2663	PF10864.3	gi|289596817|ref|YP_003483513.1|	-	0.12	12.5	1.3	0.36	11.0	0.9	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2663)
Tetraspannin	PF00335.15	gi|289596818|ref|YP_003483514.1|	-	8.1e-07	28.5	0.9	1e-06	28.1	0.7	1.1	1	0	0	1	1	1	1	Tetraspanin	family
Potyvirid-P3	PF13608.1	gi|289596818|ref|YP_003483514.1|	-	0.0058	15.8	2.6	0.0072	15.5	1.8	1.1	1	0	0	1	1	1	1	Protein	P3	of	Potyviral	polyprotein
SID-1_RNA_chan	PF13965.1	gi|289596818|ref|YP_003483514.1|	-	0.061	11.4	0.7	0.092	10.8	0.5	1.3	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
TerC	PF03741.11	gi|289596818|ref|YP_003483514.1|	-	0.092	12.1	0.0	0.092	12.1	0.0	1.8	2	0	0	2	2	2	0	Integral	membrane	protein	TerC	family
CemA	PF03040.9	gi|289596818|ref|YP_003483514.1|	-	0.2	11.2	3.1	0.33	10.5	2.2	1.4	1	0	0	1	1	1	0	CemA	family
Mem_trans	PF03547.13	gi|289596818|ref|YP_003483514.1|	-	0.2	9.8	1.7	1.7	6.8	0.0	2.1	2	0	0	2	2	2	0	Membrane	transport	protein
DUF3169	PF11368.3	gi|289596818|ref|YP_003483514.1|	-	0.24	10.5	5.4	0.099	11.8	1.7	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3169)
Peptidase_S49_N	PF08496.5	gi|289596818|ref|YP_003483514.1|	-	0.27	11.0	4.7	0.38	10.5	3.2	1.2	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
Chromate_transp	PF02417.10	gi|289596818|ref|YP_003483514.1|	-	0.34	10.4	11.1	0.44	10.1	7.7	1.1	1	0	0	1	1	1	0	Chromate	transporter
DUF4407	PF14362.1	gi|289596818|ref|YP_003483514.1|	-	0.84	8.5	12.3	0.018	13.9	2.8	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF4083	PF13314.1	gi|289596818|ref|YP_003483514.1|	-	0.93	9.3	4.4	0.55	10.1	0.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4083)
SieB	PF14163.1	gi|289596818|ref|YP_003483514.1|	-	3.9	7.0	6.4	0.7	9.4	0.3	2.4	1	1	1	2	2	2	0	Superinfection	exclusion	protein	B
IncA	PF04156.9	gi|289596818|ref|YP_003483514.1|	-	9.8	5.7	13.1	2.2	7.8	5.6	2.2	2	1	0	2	2	2	0	IncA	protein
ATP_bind_3	PF01171.15	gi|289596819|ref|YP_003483515.1|	-	5.3e-14	52.1	0.0	9.4e-14	51.3	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
RecR	PF02132.10	gi|289596819|ref|YP_003483515.1|	-	0.00039	19.7	2.0	0.0074	15.7	0.4	2.6	2	0	0	2	2	2	1	RecR	protein
NAD_synthase	PF02540.12	gi|289596819|ref|YP_003483515.1|	-	0.0015	17.5	0.0	0.0026	16.6	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
DUF2392	PF10288.4	gi|289596819|ref|YP_003483515.1|	-	0.0016	18.7	0.0	0.0036	17.6	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2392)
Asn_synthase	PF00733.16	gi|289596819|ref|YP_003483515.1|	-	0.0031	17.0	0.0	0.0046	16.4	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.9	gi|289596819|ref|YP_003483515.1|	-	0.012	15.0	0.0	0.025	14.0	0.0	1.5	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|289596819|ref|YP_003483515.1|	-	0.029	12.9	0.0	0.044	12.3	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyl	transferase
QueC	PF06508.8	gi|289596819|ref|YP_003483515.1|	-	0.034	13.4	0.1	0.14	11.4	0.0	2.0	1	1	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
Antitoxin-MazE	PF04014.13	gi|289596819|ref|YP_003483515.1|	-	0.049	13.3	0.0	0.12	12.0	0.0	1.7	1	0	0	1	1	1	0	Antidote-toxin	recognition	MazE
ATP_bind_4	PF01902.12	gi|289596819|ref|YP_003483515.1|	-	0.073	12.4	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	ATP-binding	region
PAPS_reduct	PF01507.14	gi|289596819|ref|YP_003483515.1|	-	0.092	12.5	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
TF_Zn_Ribbon	PF08271.7	gi|289596819|ref|YP_003483515.1|	-	3.5	7.0	7.3	0.62	9.4	0.5	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|289596819|ref|YP_003483515.1|	-	4.8	7.5	7.0	21	5.4	0.8	3.0	3	0	0	3	3	3	0	Restriction	alleviation	protein	Lar
DHH	PF01368.15	gi|289596820|ref|YP_003483516.1|	-	4e-06	26.5	0.1	8.1e-06	25.5	0.1	1.5	1	1	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|289596820|ref|YP_003483516.1|	-	0.0031	17.1	0.0	0.012	15.3	0.0	2.0	1	0	0	1	1	1	1	DHHA1	domain
ThylakoidFormat	PF11264.3	gi|289596820|ref|YP_003483516.1|	-	0.007	16.0	0.9	0.0098	15.5	0.6	1.1	1	0	0	1	1	1	1	Thylakoid	formation	protein
ParB	PF08775.5	gi|289596820|ref|YP_003483516.1|	-	0.03	14.6	1.7	0.22	11.8	0.3	2.2	2	0	0	2	2	2	0	ParB	family
PhoU_div	PF01865.11	gi|289596821|ref|YP_003483517.1|	-	7.5e-51	172.3	6.9	8.2e-51	172.1	4.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|289596821|ref|YP_003483517.1|	-	4.6e-06	26.9	5.1	0.0021	18.4	0.7	2.3	2	0	0	2	2	2	2	PhoU	domain
Dpoe2NT	PF12213.3	gi|289596821|ref|YP_003483517.1|	-	0.084	12.8	5.1	0.22	11.4	0.4	2.9	3	0	0	3	3	3	0	DNA	polymerases	epsilon	N	terminal
PHO4	PF01384.15	gi|289596822|ref|YP_003483518.1|	-	1.6e-111	372.0	37.9	6.2e-111	370.1	26.3	1.7	1	1	0	1	1	1	1	Phosphate	transporter	family
RseC_MucC	PF04246.7	gi|289596822|ref|YP_003483518.1|	-	0.00051	19.6	0.2	0.00051	19.6	0.1	4.1	3	3	2	5	5	5	1	Positive	regulator	of	sigma(E),	RseC/MucC
TctB	PF07331.6	gi|289596822|ref|YP_003483518.1|	-	0.007	16.0	10.9	0.007	16.0	7.5	4.1	1	1	0	2	2	2	1	Tripartite	tricarboxylate	transporter	TctB	family
PGA2	PF07543.7	gi|289596822|ref|YP_003483518.1|	-	0.023	14.5	0.1	0.036	13.8	0.1	1.2	1	0	0	1	1	1	0	Protein	trafficking	PGA2
Ninjurin	PF04923.7	gi|289596822|ref|YP_003483518.1|	-	0.13	12.0	1.5	5.2	6.8	0.1	2.6	2	0	0	2	2	2	0	Ninjurin
YbjM	PF11045.3	gi|289596822|ref|YP_003483518.1|	-	0.77	9.5	6.3	1.1	9.0	0.6	3.3	2	1	1	3	3	3	0	Putative	inner	membrane	protein	of	Enterobacteriaceae
NUDIX	PF00293.23	gi|289596823|ref|YP_003483519.1|	-	4.1e-12	45.9	0.0	5.5e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NMD3	PF04981.8	gi|289596824|ref|YP_003483520.1|	-	5.1e-48	163.2	3.0	8.4e-48	162.5	2.1	1.3	1	0	0	1	1	1	1	NMD3	family
DUF164	PF02591.10	gi|289596824|ref|YP_003483520.1|	-	0.0032	17.2	2.0	0.051	13.3	0.2	2.6	2	0	0	2	2	2	1	Putative	zinc	ribbon	domain
DZR	PF12773.2	gi|289596824|ref|YP_003483520.1|	-	0.079	12.7	5.1	0.49	10.2	1.9	2.7	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-ISL3	PF14690.1	gi|289596824|ref|YP_003483520.1|	-	0.099	12.6	3.1	2	8.5	0.1	3.3	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-RING_3	PF14369.1	gi|289596824|ref|YP_003483520.1|	-	0.21	11.6	2.9	13	5.9	0.0	2.8	3	0	0	3	3	3	0	zinc-finger
DNA_RNApol_7kD	PF03604.8	gi|289596824|ref|YP_003483520.1|	-	0.24	10.8	2.6	0.87	9.1	0.1	2.6	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mut7-C	PF01927.11	gi|289596824|ref|YP_003483520.1|	-	1.2	9.0	5.0	32	4.4	0.0	2.9	3	0	0	3	3	3	0	Mut7-C	RNAse	domain
zf-ribbon_3	PF13248.1	gi|289596824|ref|YP_003483520.1|	-	2.9	7.2	8.9	0.95	8.7	0.0	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|289596824|ref|YP_003483520.1|	-	3.7	7.3	7.4	2	8.1	0.3	2.8	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.5	gi|289596824|ref|YP_003483520.1|	-	7	6.6	8.0	8.9	6.3	0.7	3.2	2	1	1	3	3	3	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289596824|ref|YP_003483520.1|	-	7.7	6.1	8.6	2	7.9	0.5	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
PAC2	PF09754.4	gi|289596825|ref|YP_003483521.1|	-	1.6e-47	162.1	0.0	1.9e-47	161.9	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Nop10p	PF04135.7	gi|289596826|ref|YP_003483522.1|	-	1.2e-24	85.7	1.5	1.3e-24	85.6	1.0	1.1	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
NOB1_Zn_bind	PF08772.6	gi|289596826|ref|YP_003483522.1|	-	0.00017	21.3	1.0	0.0035	17.1	0.7	2.1	1	1	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-NADH-PPase	PF09297.6	gi|289596826|ref|YP_003483522.1|	-	0.0003	20.2	0.6	0.61	9.6	0.1	2.2	2	0	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
PolC_DP2	PF03833.8	gi|289596826|ref|YP_003483522.1|	-	0.00034	18.4	0.1	0.00034	18.4	0.1	1.1	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
RecR	PF02132.10	gi|289596826|ref|YP_003483522.1|	-	0.00039	19.7	0.4	0.00047	19.5	0.3	1.2	1	0	0	1	1	1	1	RecR	protein
zf-ribbon_3	PF13248.1	gi|289596826|ref|YP_003483522.1|	-	0.00085	18.4	4.7	0.12	11.6	3.7	2.3	1	1	1	2	2	2	2	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|289596826|ref|YP_003483522.1|	-	0.00097	18.9	0.6	0.00097	18.9	0.4	1.7	2	0	0	2	2	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_2	PF13240.1	gi|289596826|ref|YP_003483522.1|	-	0.0012	18.2	4.4	0.45	10.0	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|289596826|ref|YP_003483522.1|	-	0.0013	18.1	2.1	0.76	9.3	0.2	2.6	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
DZR	PF12773.2	gi|289596826|ref|YP_003483522.1|	-	0.0027	17.5	0.3	0.004	16.9	0.2	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-TFIIB	PF13453.1	gi|289596826|ref|YP_003483522.1|	-	0.012	14.7	0.5	3.2	7.0	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-ISL3	PF14690.1	gi|289596826|ref|YP_003483522.1|	-	0.013	15.4	5.9	1.1	9.4	0.5	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF1272	PF06906.6	gi|289596826|ref|YP_003483522.1|	-	0.028	14.2	0.9	0.039	13.7	0.6	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-tcix	PF14952.1	gi|289596826|ref|YP_003483522.1|	-	0.029	13.6	9.0	0.031	13.5	0.9	2.3	1	1	1	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF1610	PF07754.6	gi|289596826|ref|YP_003483522.1|	-	0.033	14.2	8.3	0.99	9.5	1.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
DNA_ligase_ZBD	PF03119.11	gi|289596826|ref|YP_003483522.1|	-	0.043	13.5	2.0	5	6.9	0.2	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF1936	PF09151.5	gi|289596826|ref|YP_003483522.1|	-	0.057	12.9	7.1	0.36	10.3	0.6	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1936)
NRDD	PF13597.1	gi|289596826|ref|YP_003483522.1|	-	0.07	11.2	0.2	0.081	10.9	0.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
Zn-ribbon_8	PF09723.5	gi|289596826|ref|YP_003483522.1|	-	0.085	12.8	4.7	3.2	7.7	0.2	2.3	1	1	1	2	2	2	0	Zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|289596826|ref|YP_003483522.1|	-	0.11	12.1	1.4	9.1	6.0	0.1	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-IS66	PF13005.2	gi|289596826|ref|YP_003483522.1|	-	0.11	12.4	3.7	0.72	9.8	2.6	2.2	1	1	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
TF_Zn_Ribbon	PF08271.7	gi|289596826|ref|YP_003483522.1|	-	0.14	11.5	4.5	3.5	7.0	0.3	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
DUF2072	PF09845.4	gi|289596826|ref|YP_003483522.1|	-	0.16	11.8	1.5	0.49	10.3	1.1	1.8	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS1595	PF12760.2	gi|289596826|ref|YP_003483522.1|	-	0.16	11.7	4.7	3.8	7.3	0.1	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|289596826|ref|YP_003483522.1|	-	0.22	11.8	4.2	1.4	9.2	0.1	2.2	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-H2C2_2	PF13465.1	gi|289596826|ref|YP_003483522.1|	-	0.22	11.8	1.7	13	6.2	0.1	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
UPF0547	PF10571.4	gi|289596826|ref|YP_003483522.1|	-	0.23	11.1	4.5	1.7	8.4	0.2	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF2082	PF09855.4	gi|289596826|ref|YP_003483522.1|	-	0.23	11.3	3.9	4.6	7.1	0.2	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-dskA_traR	PF01258.12	gi|289596826|ref|YP_003483522.1|	-	0.27	11.0	4.3	2.2	8.1	0.2	2.3	1	1	1	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
ADK_lid	PF05191.9	gi|289596826|ref|YP_003483522.1|	-	0.32	10.6	2.6	8.4	6.1	0.1	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zinc_ribbon_5	PF13719.1	gi|289596826|ref|YP_003483522.1|	-	0.39	10.3	3.0	6.9	6.3	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|289596826|ref|YP_003483522.1|	-	0.48	10.2	2.3	18	5.1	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Nudix_N_2	PF14803.1	gi|289596826|ref|YP_003483522.1|	-	0.49	10.1	3.9	6.9	6.4	0.2	2.2	1	1	2	3	3	3	0	Nudix	N-terminal
VP_N-CPKC	PF11475.3	gi|289596826|ref|YP_003483522.1|	-	0.51	9.9	6.7	0.68	9.5	0.2	2.2	1	1	1	2	2	2	0	Virion	protein	N	terminal	domain
zf-FPG_IleRS	PF06827.9	gi|289596826|ref|YP_003483522.1|	-	0.58	9.8	4.1	5.3	6.7	3.0	2.2	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Ogr_Delta	PF04606.7	gi|289596826|ref|YP_003483522.1|	-	0.74	9.5	3.9	13	5.4	0.3	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Cys_rich_CPCC	PF14206.1	gi|289596826|ref|YP_003483522.1|	-	0.74	9.4	4.0	7.6	6.1	0.0	2.5	2	1	1	3	3	3	0	Cysteine-rich	CPCC
Cys_rich_KTR	PF14205.1	gi|289596826|ref|YP_003483522.1|	-	0.81	9.1	5.4	2	7.9	0.5	2.2	1	1	1	2	2	2	0	Cysteine-rich	KTR
Auto_anti-p27	PF06677.7	gi|289596826|ref|YP_003483522.1|	-	0.82	9.4	5.1	2.7	7.8	0.2	2.1	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_4	PF13717.1	gi|289596826|ref|YP_003483522.1|	-	0.84	9.3	3.9	9.3	6.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|289596826|ref|YP_003483522.1|	-	1.8	8.3	7.6	4.3	7.1	0.6	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-CCHC	PF00098.18	gi|289596826|ref|YP_003483522.1|	-	2.2	8.3	6.1	14	5.7	0.3	2.3	2	0	0	2	2	2	0	Zinc	knuckle
DUF329	PF03884.9	gi|289596826|ref|YP_003483522.1|	-	2.4	7.7	4.7	14	5.3	0.2	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF329)
zf-CCHC_5	PF14787.1	gi|289596826|ref|YP_003483522.1|	-	5.5	6.5	9.2	4.2	6.9	0.7	2.4	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
EIF_2_alpha	PF07541.7	gi|289596827|ref|YP_003483523.1|	-	5.6e-28	96.9	0.0	1.2e-27	95.8	0.0	1.6	1	0	0	1	1	1	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|289596827|ref|YP_003483523.1|	-	2.2e-14	53.3	0.2	1.3e-13	50.8	0.0	2.0	2	0	0	2	2	2	1	S1	RNA	binding	domain
HNOB	PF07700.10	gi|289596827|ref|YP_003483523.1|	-	0.1	12.1	0.0	0.19	11.2	0.0	1.5	1	0	0	1	1	1	0	Heme	NO	binding
Ribosomal_S27e	PF01667.12	gi|289596828|ref|YP_003483524.1|	-	7.8e-22	76.5	1.5	9.5e-22	76.3	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
A2L_zn_ribbon	PF08792.5	gi|289596828|ref|YP_003483524.1|	-	0.00022	20.6	0.8	0.00034	19.9	0.6	1.4	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|289596828|ref|YP_003483524.1|	-	0.00058	19.3	1.5	0.054	13.0	0.2	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|289596828|ref|YP_003483524.1|	-	0.00066	19.9	5.5	0.0097	16.1	1.0	1.7	1	1	1	2	2	2	2	Restriction	alleviation	protein	Lar
zinc_ribbon_4	PF13717.1	gi|289596828|ref|YP_003483524.1|	-	0.00071	19.2	1.5	0.069	12.8	0.2	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|289596828|ref|YP_003483524.1|	-	0.0017	17.5	2.3	0.014	14.5	1.6	2.1	1	1	1	2	2	2	1	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|289596828|ref|YP_003483524.1|	-	0.0045	16.4	1.0	0.26	10.8	0.1	2.2	2	0	0	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.14	gi|289596828|ref|YP_003483524.1|	-	0.006	16.2	0.3	0.0066	16.1	0.2	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
OrfB_Zn_ribbon	PF07282.6	gi|289596828|ref|YP_003483524.1|	-	0.0087	15.7	0.1	0.01	15.4	0.1	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.1	gi|289596828|ref|YP_003483524.1|	-	0.0093	15.4	0.5	0.46	10.0	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|289596828|ref|YP_003483524.1|	-	0.017	14.9	0.5	0.022	14.5	0.3	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|289596828|ref|YP_003483524.1|	-	0.024	14.1	0.2	0.032	13.7	0.1	1.2	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|289596828|ref|YP_003483524.1|	-	0.025	13.8	1.7	0.11	11.8	1.2	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
Zn_Tnp_IS1	PF03811.8	gi|289596828|ref|YP_003483524.1|	-	0.028	13.9	4.0	0.3	10.6	0.3	2.2	1	1	1	2	2	2	0	InsA	N-terminal	domain
zinc_ribbon_6	PF14599.1	gi|289596828|ref|YP_003483524.1|	-	0.035	13.8	1.5	0.05	13.4	1.0	1.3	1	0	0	1	1	1	0	Zinc-ribbon
Zn_ribbon_recom	PF13408.1	gi|289596828|ref|YP_003483524.1|	-	0.036	14.3	1.7	4.7	7.5	0.1	2.2	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
CpXC	PF14353.1	gi|289596828|ref|YP_003483524.1|	-	0.037	13.9	1.2	0.34	10.8	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
TFIIS_C	PF01096.13	gi|289596828|ref|YP_003483524.1|	-	0.043	13.4	2.3	1.4	8.6	1.7	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DUF3797	PF12677.2	gi|289596828|ref|YP_003483524.1|	-	0.044	13.4	2.3	0.19	11.3	1.6	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Elf1	PF05129.8	gi|289596828|ref|YP_003483524.1|	-	0.044	13.4	2.2	0.078	12.6	1.6	1.6	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DNA_RNApol_7kD	PF03604.8	gi|289596828|ref|YP_003483524.1|	-	0.05	13.0	5.4	0.65	9.5	3.7	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.4	gi|289596828|ref|YP_003483524.1|	-	0.057	13.1	3.3	0.33	10.7	0.4	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Desulfoferrod_N	PF06397.7	gi|289596828|ref|YP_003483524.1|	-	0.065	12.6	2.6	0.3	10.5	0.0	2.6	3	0	0	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
Ribosomal_L37ae	PF01780.14	gi|289596828|ref|YP_003483524.1|	-	0.066	13.0	0.4	0.066	13.0	0.3	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
ZZ	PF00569.12	gi|289596828|ref|YP_003483524.1|	-	0.075	12.5	0.9	3.8	7.1	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger,	ZZ	type
zf-LSD1	PF06943.7	gi|289596828|ref|YP_003483524.1|	-	0.079	12.5	1.2	0.92	9.1	0.1	2.2	2	0	0	2	2	2	0	LSD1	zinc	finger
T4_baseplate	PF12322.3	gi|289596828|ref|YP_003483524.1|	-	0.079	12.2	0.4	0.079	12.2	0.3	1.4	1	1	0	1	1	1	0	T4	bacteriophage	base	plate	protein
DZR	PF12773.2	gi|289596828|ref|YP_003483524.1|	-	0.079	12.7	0.8	0.25	11.2	0.6	1.6	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-NADH-PPase	PF09297.6	gi|289596828|ref|YP_003483524.1|	-	0.1	12.1	2.0	0.95	9.0	0.3	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-AN1	PF01428.11	gi|289596828|ref|YP_003483524.1|	-	0.11	12.3	0.9	2.3	8.1	0.1	2.1	2	0	0	2	2	2	0	AN1-like	Zinc	finger
zf-CHY	PF05495.7	gi|289596828|ref|YP_003483524.1|	-	0.12	12.5	0.9	0.15	12.2	0.7	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
Zn-ribbon_8	PF09723.5	gi|289596828|ref|YP_003483524.1|	-	0.12	12.3	2.6	0.43	10.5	1.8	1.8	1	1	1	2	2	2	0	Zinc	ribbon	domain
Prok-RING_1	PF14446.1	gi|289596828|ref|YP_003483524.1|	-	0.14	11.8	3.3	0.28	10.9	2.3	1.5	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DUF1922	PF09082.5	gi|289596828|ref|YP_003483524.1|	-	0.14	12.2	2.1	0.19	11.8	0.6	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1922)
C1_1	PF00130.17	gi|289596828|ref|YP_003483524.1|	-	0.15	11.8	0.6	0.21	11.3	0.4	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF1451	PF07295.6	gi|289596828|ref|YP_003483524.1|	-	0.16	11.7	0.8	0.21	11.3	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
Sgf11	PF08209.6	gi|289596828|ref|YP_003483524.1|	-	0.25	10.6	1.0	9.8	5.5	0.2	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Cys_rich_CPCC	PF14206.1	gi|289596828|ref|YP_003483524.1|	-	0.26	10.8	1.9	0.33	10.5	1.3	1.1	1	0	0	1	1	1	0	Cysteine-rich	CPCC
DUF329	PF03884.9	gi|289596828|ref|YP_003483524.1|	-	0.31	10.6	2.7	1.6	8.3	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF329)
zf-CCHC_6	PF15288.1	gi|289596828|ref|YP_003483524.1|	-	0.32	10.6	5.4	5.3	6.8	0.5	2.3	2	0	0	2	2	2	0	Zinc	knuckle
zf-ISL3	PF14690.1	gi|289596828|ref|YP_003483524.1|	-	0.39	10.7	2.8	0.83	9.7	0.2	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2_3	PF13878.1	gi|289596828|ref|YP_003483524.1|	-	0.44	10.1	2.8	3.7	7.1	0.1	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Mu-like_Com	PF10122.4	gi|289596828|ref|YP_003483524.1|	-	0.99	8.5	3.1	3.9	6.6	0.1	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
Ribosomal_L44	PF00935.14	gi|289596829|ref|YP_003483525.1|	-	1.1e-30	105.4	3.8	1.1e-30	105.4	2.6	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.15	gi|289596829|ref|YP_003483525.1|	-	0.0009	19.4	2.9	0.0009	19.4	2.0	2.5	2	0	0	2	2	2	1	Ribosomal	protein	L33
Elf1	PF05129.8	gi|289596829|ref|YP_003483525.1|	-	0.0033	17.0	1.4	1.2	8.8	0.1	2.2	2	0	0	2	2	2	2	Transcription	elongation	factor	Elf1	like
HNH	PF01844.18	gi|289596829|ref|YP_003483525.1|	-	0.053	13.3	1.6	2	8.3	0.0	2.2	2	0	0	2	2	2	0	HNH	endonuclease
NOB1_Zn_bind	PF08772.6	gi|289596829|ref|YP_003483525.1|	-	0.12	12.2	1.3	0.35	10.7	0.1	2.0	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-AN1	PF01428.11	gi|289596829|ref|YP_003483525.1|	-	0.29	11.0	2.7	6.3	6.7	0.2	2.2	2	0	0	2	2	2	0	AN1-like	Zinc	finger
Cys_rich_KTR	PF14205.1	gi|289596829|ref|YP_003483525.1|	-	0.3	10.5	3.1	0.34	10.3	0.5	2.0	2	0	0	2	2	2	0	Cysteine-rich	KTR
zf-C2H2_jaz	PF12171.3	gi|289596829|ref|YP_003483525.1|	-	0.32	11.1	4.9	2	8.6	0.7	2.3	2	0	0	2	2	2	0	Zinc-finger	double-stranded	RNA-binding
DUF2296	PF10058.4	gi|289596829|ref|YP_003483525.1|	-	0.41	10.4	2.1	13	5.5	0.1	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Tnp_zf-ribbon_2	PF13842.1	gi|289596829|ref|YP_003483525.1|	-	0.41	11.1	5.0	6	7.3	0.1	2.4	2	0	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
zf-ISL3	PF14690.1	gi|289596829|ref|YP_003483525.1|	-	0.5	10.4	7.5	1.2	9.1	1.9	2.5	2	1	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS1	PF03811.8	gi|289596829|ref|YP_003483525.1|	-	0.86	9.1	6.3	9.3	5.8	0.2	2.6	2	1	0	2	2	2	0	InsA	N-terminal	domain
Ribosomal_L34e	PF01199.13	gi|289596829|ref|YP_003483525.1|	-	1.3	9.2	5.6	0.64	10.2	1.3	1.9	1	1	1	2	2	2	0	Ribosomal	protein	L34e
Radical_SAM	PF04055.16	gi|289596830|ref|YP_003483526.1|	-	1.4e-13	51.3	0.2	4.8e-13	49.6	0.1	1.9	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289596830|ref|YP_003483526.1|	-	0.00032	20.7	0.0	0.00063	19.7	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
AIRS_C	PF02769.17	gi|289596831|ref|YP_003483527.1|	-	1.2e-20	74.0	0.0	2.1e-20	73.2	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|289596831|ref|YP_003483527.1|	-	7.8e-15	54.8	0.4	1.4e-14	54.0	0.3	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
HTH_24	PF13412.1	gi|289596832|ref|YP_003483528.1|	-	0.0074	15.6	1.6	0.015	14.6	0.2	2.3	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|289596832|ref|YP_003483528.1|	-	0.061	13.0	0.1	0.22	11.2	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|289596832|ref|YP_003483528.1|	-	0.097	12.3	0.0	1.6	8.4	0.0	2.3	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
E1-E2_ATPase	PF00122.15	gi|289596833|ref|YP_003483529.1|	-	2.4e-62	209.9	5.6	2.4e-62	209.9	3.8	2.5	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|289596833|ref|YP_003483529.1|	-	1.6e-35	123.4	1.6	2.4e-35	122.8	1.1	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.21	gi|289596833|ref|YP_003483529.1|	-	8.4e-17	60.3	0.1	5.6e-16	57.7	0.0	2.4	2	0	0	2	2	2	1	Cation	transporter/ATPase,	N-terminus
HAD	PF12710.2	gi|289596833|ref|YP_003483529.1|	-	2.8e-16	60.2	0.0	5.5e-16	59.2	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|289596833|ref|YP_003483529.1|	-	2.1e-06	27.5	2.2	0.00074	19.1	0.1	3.1	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like2	PF13246.1	gi|289596833|ref|YP_003483529.1|	-	0.00019	21.3	0.1	0.00041	20.2	0.0	1.5	1	0	0	1	1	1	1	Putative	hydrolase	of	sodium-potassium	ATPase	alpha	subunit
Lactamase_B_2	PF12706.2	gi|289596833|ref|YP_003483529.1|	-	0.029	13.9	0.0	0.069	12.6	0.0	1.6	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
DUF3366	PF11846.3	gi|289596833|ref|YP_003483529.1|	-	1.9	8.3	6.3	7.6	6.3	1.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3366)
Ribonuc_red_lgC	PF02867.10	gi|289596835|ref|YP_003483531.1|	-	3.2e-170	567.2	0.0	2.4e-120	402.6	0.0	2.6	1	1	1	2	2	2	2	Ribonucleotide	reductase,	barrel	domain
ATP-cone	PF03477.11	gi|289596835|ref|YP_003483531.1|	-	2.1e-26	92.1	8.5	1.8e-25	89.1	3.9	3.0	2	0	0	2	2	2	1	ATP	cone	domain
Ribonuc_red_lgN	PF00317.16	gi|289596835|ref|YP_003483531.1|	-	2.5e-26	91.2	0.1	5.8e-26	90.1	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
NRDD	PF13597.1	gi|289596835|ref|YP_003483531.1|	-	0.0027	15.8	0.0	0.0054	14.8	0.0	1.5	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
F-112	PF09645.5	gi|289596835|ref|YP_003483531.1|	-	0.033	14.0	3.2	0.12	12.2	0.1	2.8	3	0	0	3	3	3	0	F-112	protein
NTP_transferase	PF00483.18	gi|289596836|ref|YP_003483532.1|	-	2e-37	128.8	0.0	2.4e-37	128.5	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|289596836|ref|YP_003483532.1|	-	3.1e-14	53.3	0.0	3.6e-14	53.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
PS_pyruv_trans	PF04230.8	gi|289596836|ref|YP_003483532.1|	-	0.019	14.6	0.9	0.03	14.0	0.6	1.3	1	0	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
CTP_transf_3	PF02348.14	gi|289596836|ref|YP_003483532.1|	-	0.026	14.1	0.0	0.043	13.4	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
Lyase_1	PF00206.15	gi|289596837|ref|YP_003483533.1|	-	8.8e-55	186.0	0.1	1.2e-54	185.5	0.1	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|289596837|ref|YP_003483533.1|	-	1.4e-14	53.8	0.0	6.9e-14	51.6	0.0	2.3	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.6	gi|289596837|ref|YP_003483533.1|	-	1e-06	28.5	0.5	2.8e-06	27.1	0.1	2.0	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminal
ANTAR	PF03861.9	gi|289596837|ref|YP_003483533.1|	-	0.017	14.7	0.0	0.05	13.1	0.0	1.8	1	0	0	1	1	1	0	ANTAR	domain
ASL_C2	PF14698.1	gi|289596837|ref|YP_003483533.1|	-	0.018	15.0	0.5	0.15	12.1	0.1	2.5	3	0	0	3	3	3	0	Argininosuccinate	lyase	C-terminal
MMR1	PF08505.5	gi|289596838|ref|YP_003483534.1|	-	0.031	14.2	2.4	0.039	14.0	1.6	1.0	1	0	0	1	1	1	0	Mitochondrial	Myo2	receptor-related	protein
Activator-TraM	PF11657.3	gi|289596838|ref|YP_003483534.1|	-	0.18	11.2	6.0	1.3	8.5	0.2	2.4	1	1	1	2	2	2	0	Transcriptional	activator	TraM
Lipoprotein_10	PF03202.8	gi|289596838|ref|YP_003483534.1|	-	0.48	10.4	8.2	0.64	10.0	5.7	1.3	1	0	0	1	1	1	0	Putative	mycoplasma	lipoprotein,	C-terminal	region
DUF3450	PF11932.3	gi|289596838|ref|YP_003483534.1|	-	0.51	9.5	9.5	0.62	9.2	6.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
DUF342	PF03961.8	gi|289596838|ref|YP_003483534.1|	-	0.93	7.8	15.0	1	7.7	10.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
IncA	PF04156.9	gi|289596838|ref|YP_003483534.1|	-	1.5	8.3	10.0	2.2	7.8	7.0	1.3	1	0	0	1	1	1	0	IncA	protein
AAA_23	PF13476.1	gi|289596838|ref|YP_003483534.1|	-	2.4	8.4	13.9	3.5	7.8	9.6	1.4	1	0	0	1	1	1	0	AAA	domain
Uds1	PF15456.1	gi|289596838|ref|YP_003483534.1|	-	3	7.8	14.7	3.4	7.6	9.8	1.3	1	1	0	1	1	1	0	Up-regulated	During	Septation
HSP70	PF00012.15	gi|289596838|ref|YP_003483534.1|	-	4.4	5.0	15.1	5.3	4.8	10.5	1.0	1	0	0	1	1	1	0	Hsp70	protein
Effector_1	PF04518.7	gi|289596838|ref|YP_003483534.1|	-	5.7	5.8	10.3	4.8	6.0	6.0	1.5	1	1	0	1	1	1	0	Effector	from	type	III	secretion	system
TMF_DNA_bd	PF12329.3	gi|289596838|ref|YP_003483534.1|	-	6	6.7	22.9	10	5.9	6.8	2.9	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Pox_A_type_inc	PF04508.7	gi|289596838|ref|YP_003483534.1|	-	7.6	6.6	7.7	2	8.4	1.1	3.1	2	1	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
DDE_Tnp_1	PF01609.16	gi|289596839|ref|YP_003483535.1|	-	1.7e-19	70.2	0.4	1.7e-19	70.2	0.3	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596839|ref|YP_003483535.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596839|ref|YP_003483535.1|	-	0.0013	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
Phage_GPA	PF05840.8	gi|289596839|ref|YP_003483535.1|	-	0.075	11.7	0.2	0.11	11.1	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
HTH_38	PF13936.1	gi|289596839|ref|YP_003483535.1|	-	0.092	12.3	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDE_Tnp_1_2	PF13586.1	gi|289596839|ref|YP_003483535.1|	-	0.093	12.9	2.1	0.26	11.4	0.4	2.4	2	1	0	2	2	2	0	Transposase	DDE	domain
TMF_DNA_bd	PF12329.3	gi|289596840|ref|YP_003483536.1|	-	1.7e-05	24.5	4.4	2.7e-05	23.8	3.0	1.3	1	0	0	1	1	1	1	TATA	element	modulatory	factor	1	DNA	binding
Atg14	PF10186.4	gi|289596840|ref|YP_003483536.1|	-	0.00065	18.7	5.2	0.00073	18.5	3.6	1.0	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
M_domain	PF12938.2	gi|289596840|ref|YP_003483536.1|	-	0.0018	18.1	0.1	0.0019	18.0	0.0	1.0	1	0	0	1	1	1	1	M	domain	of	GW182
Prefoldin_2	PF01920.15	gi|289596840|ref|YP_003483536.1|	-	0.0022	17.7	4.0	0.017	14.8	1.3	2.0	1	1	1	2	2	2	1	Prefoldin	subunit
STAT_alpha	PF01017.15	gi|289596840|ref|YP_003483536.1|	-	0.0025	17.5	1.3	0.0029	17.3	0.9	1.0	1	0	0	1	1	1	1	STAT	protein,	all-alpha	domain
Nup54	PF13874.1	gi|289596840|ref|YP_003483536.1|	-	0.0029	17.2	0.5	0.0036	16.9	0.4	1.2	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
DUF4337	PF14235.1	gi|289596840|ref|YP_003483536.1|	-	0.0033	17.2	5.2	0.0046	16.7	3.6	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4337)
ADIP	PF11559.3	gi|289596840|ref|YP_003483536.1|	-	0.0041	17.0	3.8	0.0047	16.8	2.6	1.1	1	0	0	1	1	1	1	Afadin-	and	alpha	-actinin-Binding
PspA_IM30	PF04012.7	gi|289596840|ref|YP_003483536.1|	-	0.0043	16.4	2.7	0.0047	16.3	1.8	1.2	1	0	0	1	1	1	1	PspA/IM30	family
MSP1_C	PF07462.6	gi|289596840|ref|YP_003483536.1|	-	0.0068	14.8	5.0	0.0074	14.7	3.5	1.0	1	0	0	1	1	1	1	Merozoite	surface	protein	1	(MSP1)	C-terminus
DUF4200	PF13863.1	gi|289596840|ref|YP_003483536.1|	-	0.007	16.3	9.0	0.021	14.7	1.1	2.0	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4200)
COG2	PF06148.6	gi|289596840|ref|YP_003483536.1|	-	0.0081	16.0	1.2	0.0087	15.9	0.8	1.0	1	0	0	1	1	1	1	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
HCMV_UL139	PF12507.3	gi|289596840|ref|YP_003483536.1|	-	0.0094	16.1	1.4	0.01	16.0	1.0	1.1	1	0	0	1	1	1	1	Human	Cytomegalovirus	UL139	protein
YscO	PF07321.7	gi|289596840|ref|YP_003483536.1|	-	0.012	15.4	1.1	0.015	15.1	0.8	1.2	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
Snapin_Pallidin	PF14712.1	gi|289596840|ref|YP_003483536.1|	-	0.014	15.6	1.7	0.019	15.2	1.2	1.2	1	0	0	1	1	1	0	Snapin/Pallidin
Seryl_tRNA_N	PF02403.17	gi|289596840|ref|YP_003483536.1|	-	0.015	15.2	5.2	0.018	15.0	3.6	1.1	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
DivIC	PF04977.10	gi|289596840|ref|YP_003483536.1|	-	0.016	14.7	5.1	0.027	13.9	3.5	1.5	1	1	0	1	1	1	0	Septum	formation	initiator
Snf7	PF03357.16	gi|289596840|ref|YP_003483536.1|	-	0.016	14.6	5.7	0.018	14.4	3.9	1.1	1	0	0	1	1	1	0	Snf7
SPAM	PF02090.10	gi|289596840|ref|YP_003483536.1|	-	0.017	15.1	2.1	0.02	14.8	1.5	1.1	1	0	0	1	1	1	0	Salmonella	surface	presentation	of	antigen	gene	type	M	protein
Synaptobrevin	PF00957.16	gi|289596840|ref|YP_003483536.1|	-	0.017	14.7	0.3	0.024	14.2	0.2	1.2	1	0	0	1	1	1	0	Synaptobrevin
TBPIP	PF07106.8	gi|289596840|ref|YP_003483536.1|	-	0.019	14.5	3.2	0.021	14.3	2.2	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF4201	PF13870.1	gi|289596840|ref|YP_003483536.1|	-	0.019	14.3	4.1	0.024	14.0	2.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
GrpE	PF01025.14	gi|289596840|ref|YP_003483536.1|	-	0.02	14.4	6.5	0.021	14.3	4.5	1.1	1	0	0	1	1	1	0	GrpE
CM_2	PF01817.16	gi|289596840|ref|YP_003483536.1|	-	0.024	14.7	0.2	0.039	14.0	0.1	1.4	1	0	0	1	1	1	0	Chorismate	mutase	type	II
DUF1202	PF06717.6	gi|289596840|ref|YP_003483536.1|	-	0.025	13.8	1.8	0.028	13.6	1.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1202)
CENP-H	PF05837.7	gi|289596840|ref|YP_003483536.1|	-	0.029	14.5	3.6	0.033	14.3	2.5	1.1	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
HR1	PF02185.11	gi|289596840|ref|YP_003483536.1|	-	0.033	13.9	1.8	0.049	13.3	1.3	1.3	1	0	0	1	1	1	0	Hr1	repeat
DUF342	PF03961.8	gi|289596840|ref|YP_003483536.1|	-	0.034	12.5	4.3	0.033	12.6	3.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Mod_r	PF07200.8	gi|289596840|ref|YP_003483536.1|	-	0.035	14.0	3.5	0.042	13.7	2.4	1.1	1	0	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
FlxA	PF14282.1	gi|289596840|ref|YP_003483536.1|	-	0.037	13.9	0.4	0.047	13.6	0.2	1.2	1	0	0	1	1	1	0	FlxA-like	protein
bZIP_2	PF07716.10	gi|289596840|ref|YP_003483536.1|	-	0.037	13.8	1.0	0.037	13.8	0.7	2.1	1	1	0	2	2	2	0	Basic	region	leucine	zipper
IncA	PF04156.9	gi|289596840|ref|YP_003483536.1|	-	0.038	13.5	2.9	0.042	13.4	2.0	1.1	1	0	0	1	1	1	0	IncA	protein
SlyX	PF04102.7	gi|289596840|ref|YP_003483536.1|	-	0.04	14.3	0.2	0.055	13.8	0.1	1.3	1	0	0	1	1	1	0	SlyX
DUF3552	PF12072.3	gi|289596840|ref|YP_003483536.1|	-	0.042	13.0	3.8	0.054	12.6	2.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
DUF812	PF05667.6	gi|289596840|ref|YP_003483536.1|	-	0.048	12.1	3.5	0.049	12.1	2.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
Mnd1	PF03962.10	gi|289596840|ref|YP_003483536.1|	-	0.049	13.2	2.9	0.054	13.1	2.0	1.1	1	0	0	1	1	1	0	Mnd1	family
Spc24	PF08286.6	gi|289596840|ref|YP_003483536.1|	-	0.049	13.3	1.1	0.064	12.9	0.7	1.3	1	1	0	1	1	1	0	Spc24	subunit	of	Ndc80
APG6	PF04111.7	gi|289596840|ref|YP_003483536.1|	-	0.054	12.5	3.1	0.062	12.3	2.2	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg6
MscS_porin	PF12795.2	gi|289596840|ref|YP_003483536.1|	-	0.054	12.8	5.1	0.05	12.9	2.2	1.7	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF972	PF06156.8	gi|289596840|ref|YP_003483536.1|	-	0.055	13.8	1.4	0.068	13.5	1.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Spc7	PF08317.6	gi|289596840|ref|YP_003483536.1|	-	0.058	12.0	3.4	0.064	11.9	2.4	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
BRE1	PF08647.6	gi|289596840|ref|YP_003483536.1|	-	0.069	13.1	5.1	0.056	13.4	2.6	1.5	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
Ax_dynein_light	PF10211.4	gi|289596840|ref|YP_003483536.1|	-	0.076	12.8	5.1	0.086	12.6	3.5	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
TPR_MLP1_2	PF07926.7	gi|289596840|ref|YP_003483536.1|	-	0.077	12.7	6.7	0.11	12.2	4.7	1.4	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Fib_alpha	PF08702.5	gi|289596840|ref|YP_003483536.1|	-	0.084	12.9	3.1	0.17	11.9	1.5	1.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
CENP-F_leu_zip	PF10473.4	gi|289596840|ref|YP_003483536.1|	-	0.12	12.2	2.9	0.29	10.9	1.6	1.7	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF904	PF06005.7	gi|289596840|ref|YP_003483536.1|	-	0.12	12.6	1.2	0.15	12.3	0.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF904)
DUF848	PF05852.6	gi|289596840|ref|YP_003483536.1|	-	0.13	12.1	0.8	0.14	12.0	0.5	1.2	1	0	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF357	PF04010.8	gi|289596840|ref|YP_003483536.1|	-	0.14	11.8	1.7	0.2	11.4	1.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF357)
FliD_N	PF02465.13	gi|289596840|ref|YP_003483536.1|	-	0.15	12.4	3.2	0.33	11.3	2.2	1.6	1	1	0	1	1	1	0	Flagellar	hook-associated	protein	2	N-terminus
FliD_C	PF07195.7	gi|289596840|ref|YP_003483536.1|	-	0.15	11.3	1.9	0.16	11.2	1.3	1.2	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
Cep57_MT_bd	PF06657.8	gi|289596840|ref|YP_003483536.1|	-	0.16	11.9	0.7	0.16	11.9	0.5	1.7	2	1	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
DUF3847	PF12958.2	gi|289596840|ref|YP_003483536.1|	-	0.19	11.5	2.5	0.27	11.0	1.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3847)
LOH1CR12	PF10158.4	gi|289596840|ref|YP_003483536.1|	-	0.19	11.4	0.9	0.2	11.4	0.6	1.1	1	0	0	1	1	1	0	Tumour	suppressor	protein
DUF4140	PF13600.1	gi|289596840|ref|YP_003483536.1|	-	0.22	11.9	2.0	0.24	11.8	0.7	1.5	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Uds1	PF15456.1	gi|289596840|ref|YP_003483536.1|	-	0.25	11.3	3.9	0.29	11.1	2.7	1.1	1	0	0	1	1	1	0	Up-regulated	During	Septation
DUF724	PF05266.9	gi|289596840|ref|YP_003483536.1|	-	0.25	10.9	4.3	0.29	10.7	3.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Pox_A_type_inc	PF04508.7	gi|289596840|ref|YP_003483536.1|	-	0.28	11.0	1.8	0.88	9.5	0.0	2.7	2	2	1	3	3	2	0	Viral	A-type	inclusion	protein	repeat
AATF-Che1	PF13339.1	gi|289596840|ref|YP_003483536.1|	-	0.29	11.2	4.0	0.36	10.9	2.8	1.1	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
DUF4615	PF15393.1	gi|289596840|ref|YP_003483536.1|	-	0.72	10.0	4.5	0.83	9.8	3.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4615)
MIT	PF04212.13	gi|289596840|ref|YP_003483536.1|	-	5	7.0	8.9	2.3	8.1	0.4	2.7	1	1	2	3	3	3	0	MIT	(microtubule	interacting	and	transport)	domain
DUF4536	PF15055.1	gi|289596841|ref|YP_003483537.1|	-	0.99	9.5	3.5	2.2	8.3	0.1	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4536)
SAM_adeno_trans	PF01887.11	gi|289596843|ref|YP_003483539.1|	-	2.5e-87	292.1	0.7	2.9e-87	291.9	0.5	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
Acylphosphatase	PF00708.13	gi|289596844|ref|YP_003483540.1|	-	8.9e-27	93.0	0.0	9.7e-27	92.9	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
BLUF	PF04940.7	gi|289596844|ref|YP_003483540.1|	-	0.099	12.3	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	Sensors	of	blue-light	using	FAD
Pribosyltran	PF00156.22	gi|289596845|ref|YP_003483541.1|	-	2.1e-11	43.6	4.5	1.4e-10	40.9	3.1	1.9	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|289596845|ref|YP_003483541.1|	-	0.0014	17.9	0.0	0.0016	17.6	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
ATP_bind_1	PF03029.12	gi|289596846|ref|YP_003483542.1|	-	5.1e-55	186.5	0.0	6.2e-55	186.3	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
CbiA	PF01656.18	gi|289596846|ref|YP_003483542.1|	-	1e-06	28.3	0.0	1.5e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_10	PF12846.2	gi|289596846|ref|YP_003483542.1|	-	7.7e-06	25.5	0.0	1.9e-05	24.2	0.0	1.8	1	1	0	1	1	1	1	AAA-like	domain
AAA_24	PF13479.1	gi|289596846|ref|YP_003483542.1|	-	4.1e-05	23.2	0.0	7.4e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|289596846|ref|YP_003483542.1|	-	0.00015	21.2	0.0	0.087	12.2	0.0	2.2	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|289596846|ref|YP_003483542.1|	-	0.00042	21.1	0.0	0.0011	19.7	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|289596846|ref|YP_003483542.1|	-	0.00049	20.2	0.0	0.0011	19.0	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|289596846|ref|YP_003483542.1|	-	0.0013	17.8	0.0	0.0095	15.0	0.0	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
MobB	PF03205.9	gi|289596846|ref|YP_003483542.1|	-	0.0023	17.6	0.0	0.0053	16.4	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|289596846|ref|YP_003483542.1|	-	0.0043	17.0	0.0	0.019	14.9	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596846|ref|YP_003483542.1|	-	0.0054	16.2	0.0	0.013	14.9	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NB-ARC	PF00931.17	gi|289596846|ref|YP_003483542.1|	-	0.018	13.8	0.0	0.035	12.9	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Ras	PF00071.17	gi|289596846|ref|YP_003483542.1|	-	0.024	14.0	0.1	7	6.0	0.0	2.5	3	0	0	3	3	3	0	Ras	family
AAA_33	PF13671.1	gi|289596846|ref|YP_003483542.1|	-	0.028	14.3	0.0	0.044	13.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|289596846|ref|YP_003483542.1|	-	0.031	13.8	0.0	0.061	12.8	0.0	1.4	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|289596846|ref|YP_003483542.1|	-	0.061	12.7	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
KaiC	PF06745.8	gi|289596846|ref|YP_003483542.1|	-	0.071	12.2	0.0	0.14	11.2	0.0	1.5	1	0	0	1	1	1	0	KaiC
ArgK	PF03308.11	gi|289596846|ref|YP_003483542.1|	-	0.072	11.8	0.0	0.14	10.9	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_5	PF07728.9	gi|289596846|ref|YP_003483542.1|	-	0.079	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1_C	PF08438.5	gi|289596846|ref|YP_003483542.1|	-	0.089	13.0	0.0	0.82	9.9	0.0	2.4	3	0	0	3	3	3	0	GTPase	of	unknown	function	C-terminal
T2SE	PF00437.15	gi|289596846|ref|YP_003483542.1|	-	0.11	11.3	0.0	0.17	10.7	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PolC_DP2	PF03833.8	gi|289596847|ref|YP_003483543.1|	-	0	1157.4	12.0	0	1152.2	6.4	3.6	2	1	0	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
DUF2072	PF09845.4	gi|289596847|ref|YP_003483543.1|	-	3.4e-05	23.7	0.7	0.0013	18.6	0.0	2.7	2	0	0	2	2	2	1	Zn-ribbon	containing	protein	(DUF2072)
DZR	PF12773.2	gi|289596847|ref|YP_003483543.1|	-	5.2e-05	22.9	4.8	0.045	13.5	0.2	2.6	2	0	0	2	2	2	2	Double	zinc	ribbon
DUF2321	PF10083.4	gi|289596847|ref|YP_003483543.1|	-	0.004	16.6	0.4	3.6	7.0	0.0	2.9	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-NADH-PPase	PF09297.6	gi|289596847|ref|YP_003483543.1|	-	0.0085	15.5	12.0	0.06	12.8	0.8	4.1	4	0	0	4	4	4	1	NADH	pyrophosphatase	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|289596847|ref|YP_003483543.1|	-	0.01	15.6	7.5	2	8.3	0.1	3.4	2	1	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Nop10p	PF04135.7	gi|289596847|ref|YP_003483543.1|	-	0.029	14.0	0.6	0.66	9.7	0.0	2.8	2	0	0	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.6	gi|289596847|ref|YP_003483543.1|	-	0.058	13.2	8.8	0.15	11.9	0.7	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
HypA	PF01155.14	gi|289596847|ref|YP_003483543.1|	-	0.23	11.1	3.4	0.84	9.3	0.2	2.6	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
Zn-ribbon_8	PF09723.5	gi|289596847|ref|YP_003483543.1|	-	0.29	11.1	12.4	0.16	11.9	0.2	3.7	2	1	1	3	3	3	0	Zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|289596847|ref|YP_003483543.1|	-	0.91	9.2	10.5	4.3	7.1	0.2	4.0	4	0	0	4	4	4	0	Nudix	N-terminal
zinc_ribbon_2	PF13240.1	gi|289596847|ref|YP_003483543.1|	-	1	8.9	29.1	0.13	11.7	2.3	4.2	4	1	0	4	4	4	0	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|289596847|ref|YP_003483543.1|	-	1.6	8.3	4.1	7	6.1	0.0	2.7	2	1	1	3	3	3	0	Transposase	zinc-binding	domain
TerY-C	PF15616.1	gi|289596847|ref|YP_003483543.1|	-	2	8.3	4.3	2.3	8.1	0.2	2.6	2	0	0	2	2	2	0	TerY-C	metal	binding	domain
zf-ribbon_3	PF13248.1	gi|289596847|ref|YP_003483543.1|	-	3.7	6.8	28.1	0.081	12.1	5.3	3.2	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|289596847|ref|YP_003483543.1|	-	4	7.0	14.6	2.6	7.6	0.1	3.9	4	0	0	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
NAD_synthase	PF02540.12	gi|289596848|ref|YP_003483544.1|	-	8.2e-85	283.5	0.2	1e-84	283.2	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|289596848|ref|YP_003483544.1|	-	1.7e-07	30.1	0.0	2.4e-05	23.0	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|289596848|ref|YP_003483544.1|	-	5.7e-07	29.2	0.0	6.8e-07	29.0	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|289596848|ref|YP_003483544.1|	-	0.00021	20.6	0.0	0.0011	18.3	0.0	1.9	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|289596848|ref|YP_003483544.1|	-	0.069	12.6	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	PP-loop	family
ThiI	PF02568.9	gi|289596848|ref|YP_003483544.1|	-	0.069	12.5	0.1	0.1	12.0	0.0	1.3	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
DUF424	PF04242.8	gi|289596849|ref|YP_003483545.1|	-	4.4e-31	106.7	0.3	5.1e-31	106.5	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
MCM	PF00493.18	gi|289596850|ref|YP_003483546.1|	-	7.7e-129	429.2	0.4	1.3e-128	428.4	0.3	1.3	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|289596850|ref|YP_003483546.1|	-	5.5e-12	46.2	2.4	7.7e-12	45.7	0.5	2.1	2	0	0	2	2	2	1	MCM	N-terminal	domain
Mg_chelatase	PF01078.16	gi|289596850|ref|YP_003483546.1|	-	4.4e-07	29.2	0.1	0.0012	18.0	0.0	2.8	1	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|289596850|ref|YP_003483546.1|	-	0.00018	21.2	0.0	0.00081	19.1	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|289596850|ref|YP_003483546.1|	-	0.0069	15.9	0.0	0.021	14.4	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|289596850|ref|YP_003483546.1|	-	0.029	13.8	0.1	0.82	9.1	0.0	2.3	1	1	0	1	1	1	0	Sigma-54	interaction	domain
Zn-ribbon_8	PF09723.5	gi|289596850|ref|YP_003483546.1|	-	0.055	13.4	0.3	0.12	12.3	0.2	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
AAA_22	PF13401.1	gi|289596851|ref|YP_003483547.1|	-	0.033	14.3	0.1	0.24	11.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|289596851|ref|YP_003483547.1|	-	0.11	12.4	0.7	26	4.7	0.6	3.3	2	1	0	2	2	2	0	AAA	domain
tRNA-synt_1	PF00133.17	gi|289596853|ref|YP_003483549.1|	-	3.2e-131	438.2	1.2	3.2e-131	438.2	0.8	2.1	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|289596853|ref|YP_003483549.1|	-	1.1e-33	116.2	4.7	2e-33	115.2	3.2	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|289596853|ref|YP_003483549.1|	-	2.3e-26	92.3	3.5	2.1e-15	56.3	0.1	3.5	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|289596853|ref|YP_003483549.1|	-	2.1e-08	33.6	0.3	2.9e-06	26.7	0.0	3.1	2	1	1	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
HxlR	PF01638.12	gi|289596853|ref|YP_003483549.1|	-	0.0056	16.2	0.4	0.81	9.3	0.1	2.7	3	0	0	3	3	3	1	HxlR-like	helix-turn-helix
zf-FPG_IleRS	PF06827.9	gi|289596853|ref|YP_003483549.1|	-	0.017	14.7	0.9	2.9	7.6	0.0	2.9	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
DUF4451	PF14616.1	gi|289596853|ref|YP_003483549.1|	-	0.03	14.0	0.6	0.42	10.3	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4451)
zf-ribbon_3	PF13248.1	gi|289596853|ref|YP_003483549.1|	-	0.088	12.0	3.3	5.7	6.2	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|289596853|ref|YP_003483549.1|	-	2	8.2	4.9	4.6	7.0	0.1	2.8	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_2	PF13240.1	gi|289596853|ref|YP_003483549.1|	-	2.6	7.6	5.2	24	4.5	0.0	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
Metallophos_2	PF12850.2	gi|289596854|ref|YP_003483550.1|	-	5e-25	88.1	0.0	6.4e-25	87.8	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|289596854|ref|YP_003483550.1|	-	4.4e-16	58.8	1.9	8.5e-16	57.9	1.3	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
FBPase_2	PF06874.6	gi|289596854|ref|YP_003483550.1|	-	0.0079	14.2	0.2	0.25	9.3	0.0	2.2	1	1	1	2	2	2	2	Firmicute	fructose-1,6-bisphosphatase
Pentapeptide_3	PF13576.1	gi|289596856|ref|YP_003483552.1|	-	1.7e-16	59.8	37.1	1.6e-07	31.0	6.8	5.9	2	2	4	6	6	6	6	Pentapeptide	repeats	(9	copies)
Pentapeptide_4	PF13599.1	gi|289596856|ref|YP_003483552.1|	-	0.024	14.4	16.4	0.048	13.4	6.7	3.2	1	1	1	2	2	2	0	Pentapeptide	repeats	(9	copies)
DDE_Tnp_1	PF01609.16	gi|289596857|ref|YP_003483553.1|	-	1.7e-19	70.2	0.4	1.7e-19	70.2	0.3	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596857|ref|YP_003483553.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596857|ref|YP_003483553.1|	-	0.0013	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
Phage_GPA	PF05840.8	gi|289596857|ref|YP_003483553.1|	-	0.075	11.7	0.2	0.11	11.1	0.1	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
HTH_38	PF13936.1	gi|289596857|ref|YP_003483553.1|	-	0.092	12.3	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDE_Tnp_1_2	PF13586.1	gi|289596857|ref|YP_003483553.1|	-	0.093	12.9	2.1	0.26	11.4	0.4	2.4	2	1	0	2	2	2	0	Transposase	DDE	domain
Ion_trans_2	PF07885.11	gi|289596858|ref|YP_003483554.1|	-	6.2e-13	48.2	9.0	6.2e-13	48.2	6.3	1.5	1	1	0	1	1	1	1	Ion	channel
Peptidase_A24	PF01478.13	gi|289596858|ref|YP_003483554.1|	-	0.75	9.9	7.7	1.2	9.3	5.4	1.3	1	0	0	1	1	1	0	Type	IV	leader	peptidase	family
Hydrolase_6	PF13344.1	gi|289596859|ref|YP_003483555.1|	-	2.5e-29	101.1	0.2	7.4e-28	96.4	0.0	2.4	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|289596859|ref|YP_003483555.1|	-	1.5e-12	47.0	0.0	4e-12	45.6	0.0	1.8	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|289596859|ref|YP_003483555.1|	-	6.9e-07	29.8	0.1	1.2e-06	29.1	0.1	1.3	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.5	gi|289596859|ref|YP_003483555.1|	-	7.5e-05	22.1	0.1	0.00026	20.3	0.0	1.9	2	0	0	2	2	2	1	Mitochondrial	PGP	phosphatase
Hydrolase_3	PF08282.7	gi|289596859|ref|YP_003483555.1|	-	0.0066	16.0	0.0	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|289596859|ref|YP_003483555.1|	-	0.016	15.4	0.0	3.5	7.8	0.0	2.5	2	1	1	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
Baculo_LEF-10	PF07206.6	gi|289596859|ref|YP_003483555.1|	-	0.057	13.0	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Baculovirus	late	expression	factor	10	(LEF-10)
FAA_hydrolase	PF01557.13	gi|289596860|ref|YP_003483556.1|	-	6.6e-67	225.1	0.0	7.8e-67	224.9	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
DUF373	PF04123.8	gi|289596861|ref|YP_003483557.1|	-	3.8e-97	325.3	13.6	4.5e-97	325.1	9.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
L_lactis_ph-MCP	PF06673.6	gi|289596861|ref|YP_003483557.1|	-	0.077	11.7	0.0	0.12	11.1	0.0	1.2	1	0	0	1	1	1	0	Lactococcus	lactis	bacteriophage	major	capsid	protein
MAF_flag10	PF01973.13	gi|289596862|ref|YP_003483558.1|	-	3.8e-25	88.3	0.1	5.2e-25	87.8	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
FA_desaturase	PF00487.19	gi|289596863|ref|YP_003483559.1|	-	6.8	6.0	8.0	3.2	7.1	4.4	1.3	1	1	0	1	1	1	0	Fatty	acid	desaturase
DUF504	PF04457.7	gi|289596864|ref|YP_003483560.1|	-	8.4e-12	45.0	1.8	1.1e-11	44.6	1.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
DUF2085	PF09858.4	gi|289596865|ref|YP_003483561.1|	-	2.7e-25	88.2	5.9	5.5e-25	87.2	4.1	1.5	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2085)
Sterol-sensing	PF12349.3	gi|289596865|ref|YP_003483561.1|	-	0.1	12.0	6.3	0.026	13.9	1.6	1.8	2	0	0	2	2	2	0	Sterol-sensing	domain	of	SREBP	cleavage-activation
AA_kinase	PF00696.23	gi|289596866|ref|YP_003483562.1|	-	1e-20	74.3	0.1	5.2e-20	72.0	0.1	1.8	1	1	0	1	1	1	1	Amino	acid	kinase	family
DHFR_1	PF00186.14	gi|289596866|ref|YP_003483562.1|	-	0.057	13.0	0.0	0.39	10.2	0.0	2.1	1	1	1	2	2	2	0	Dihydrofolate	reductase
GvpD	PF07088.6	gi|289596867|ref|YP_003483563.1|	-	1.2e-25	89.8	1.0	3.5e-23	81.6	0.2	2.3	1	1	1	2	2	2	2	GvpD	gas	vesicle	protein
KaiC	PF06745.8	gi|289596867|ref|YP_003483563.1|	-	2.9e-12	46.1	1.1	1.6e-11	43.8	0.1	2.5	2	1	0	2	2	2	1	KaiC
AAA_25	PF13481.1	gi|289596867|ref|YP_003483563.1|	-	0.00072	19.0	0.0	0.029	13.7	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
DUF2075	PF09848.4	gi|289596867|ref|YP_003483563.1|	-	0.0011	18.0	0.0	0.0014	17.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|289596867|ref|YP_003483563.1|	-	0.0023	18.0	0.0	0.006	16.7	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
AAA_14	PF13173.1	gi|289596867|ref|YP_003483563.1|	-	0.0035	17.2	3.3	0.13	12.1	0.1	2.7	2	0	0	2	2	2	1	AAA	domain
UPF0079	PF02367.12	gi|289596867|ref|YP_003483563.1|	-	0.0053	16.3	0.0	0.01	15.4	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_18	PF13238.1	gi|289596867|ref|YP_003483563.1|	-	0.0056	16.9	0.7	0.042	14.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|289596867|ref|YP_003483563.1|	-	0.008	16.3	0.1	0.055	13.6	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289596867|ref|YP_003483563.1|	-	0.011	15.7	0.0	0.022	14.8	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
ResIII	PF04851.10	gi|289596867|ref|YP_003483563.1|	-	0.016	15.0	0.0	0.033	14.0	0.0	1.6	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|289596867|ref|YP_003483563.1|	-	0.021	14.5	0.0	0.041	13.6	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_11	PF13086.1	gi|289596867|ref|YP_003483563.1|	-	0.047	13.2	0.0	0.097	12.2	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|289596867|ref|YP_003483563.1|	-	0.059	13.3	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF1355	PF07090.6	gi|289596867|ref|YP_003483563.1|	-	0.087	12.1	0.1	0.34	10.2	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1355)
AAA	PF00004.24	gi|289596867|ref|YP_003483563.1|	-	0.096	12.8	0.1	0.27	11.4	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|289596867|ref|YP_003483563.1|	-	0.19	11.2	0.1	0.37	10.2	0.1	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|289596867|ref|YP_003483563.1|	-	0.21	11.4	0.0	0.32	10.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Response_reg	PF00072.19	gi|289596868|ref|YP_003483564.1|	-	1.4e-25	89.4	0.8	1.7e-25	89.2	0.6	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
CoA_binding_2	PF13380.1	gi|289596868|ref|YP_003483564.1|	-	0.0077	16.3	0.0	0.01	16.0	0.0	1.2	1	0	0	1	1	1	1	CoA	binding	domain
SRP54	PF00448.17	gi|289596868|ref|YP_003483564.1|	-	0.008	15.6	0.6	0.01	15.2	0.4	1.1	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
DUF3798	PF12683.2	gi|289596868|ref|YP_003483564.1|	-	0.015	14.4	0.5	0.019	14.0	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
MutL	PF13941.1	gi|289596868|ref|YP_003483564.1|	-	0.029	12.7	0.2	0.07	11.4	0.2	1.5	1	1	0	1	1	1	0	MutL	protein
His_biosynth	PF00977.16	gi|289596868|ref|YP_003483564.1|	-	0.032	13.5	0.4	0.037	13.3	0.3	1.1	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
B12-binding	PF02310.14	gi|289596868|ref|YP_003483564.1|	-	0.064	13.1	0.0	0.09	12.6	0.0	1.3	1	1	0	1	1	1	0	B12	binding	domain
ATPgrasp_Ter	PF15632.1	gi|289596868|ref|YP_003483564.1|	-	0.1	11.3	0.0	0.14	10.8	0.0	1.3	1	1	0	1	1	1	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Peripla_BP_6	PF13458.1	gi|289596868|ref|YP_003483564.1|	-	0.12	11.7	0.0	0.18	11.1	0.0	1.3	1	1	0	1	1	1	0	Periplasmic	binding	protein
DUF835	PF05763.7	gi|289596869|ref|YP_003483565.1|	-	3.8e-19	68.6	2.2	1.8e-10	40.4	0.0	2.8	1	1	0	2	2	2	2	Protein	of	unknown	function	(DUF835)
PAPS_reduct	PF01507.14	gi|289596870|ref|YP_003483566.1|	-	2.8e-40	137.9	0.0	5.1e-40	137.1	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
PUA	PF01472.15	gi|289596870|ref|YP_003483566.1|	-	4.2e-23	80.8	1.0	7.6e-23	80.0	0.3	1.8	2	0	0	2	2	2	1	PUA	domain
Fer4_7	PF12838.2	gi|289596870|ref|YP_003483566.1|	-	5.5e-07	29.8	7.9	5.5e-07	29.8	5.5	2.3	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|289596870|ref|YP_003483566.1|	-	1.3e-06	28.1	7.2	1.3e-06	28.1	5.0	2.7	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|289596870|ref|YP_003483566.1|	-	2.3e-05	24.5	8.3	2.3e-05	24.5	5.8	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|289596870|ref|YP_003483566.1|	-	2.5e-05	23.6	2.2	2.5e-05	23.6	1.5	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|289596870|ref|YP_003483566.1|	-	0.00016	22.0	2.0	0.016	15.6	0.0	2.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|289596870|ref|YP_003483566.1|	-	0.0021	17.8	0.3	0.0021	17.8	0.2	3.3	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289596870|ref|YP_003483566.1|	-	0.0049	16.6	1.8	0.0049	16.6	1.3	3.8	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|289596870|ref|YP_003483566.1|	-	0.0053	16.7	8.7	0.0053	16.7	6.1	2.7	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
QueC	PF06508.8	gi|289596870|ref|YP_003483566.1|	-	0.0055	16.0	0.0	0.015	14.6	0.0	1.7	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Fer4_16	PF13484.1	gi|289596870|ref|YP_003483566.1|	-	0.023	15.4	0.2	0.023	15.4	0.2	3.4	2	1	1	3	3	2	0	4Fe-4S	double	cluster	binding	domain
Asn_synthase	PF00733.16	gi|289596870|ref|YP_003483566.1|	-	0.025	14.0	0.0	0.041	13.3	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
Fer4_11	PF13247.1	gi|289596870|ref|YP_003483566.1|	-	0.12	12.3	3.5	0.31	10.9	2.4	1.7	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289596870|ref|YP_003483566.1|	-	1.8	9.1	8.7	1.2	9.7	0.4	2.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|289596870|ref|YP_003483566.1|	-	3.7	8.0	8.2	3.4	8.1	0.3	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_2	PF12797.2	gi|289596870|ref|YP_003483566.1|	-	5.9	7.0	29.4	0.032	14.1	1.7	4.0	4	1	0	4	4	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289596870|ref|YP_003483566.1|	-	7.4	7.0	20.4	0.23	11.8	0.7	3.3	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
TrmB	PF01978.14	gi|289596871|ref|YP_003483567.1|	-	0.0028	17.3	0.1	0.0054	16.4	0.0	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
RuvB_C	PF05491.8	gi|289596871|ref|YP_003483567.1|	-	0.0062	16.1	0.1	0.0093	15.5	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_DeoR	PF08220.7	gi|289596871|ref|YP_003483567.1|	-	0.0098	15.4	1.1	0.015	14.7	0.0	1.8	3	0	0	3	3	3	1	DeoR-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|289596871|ref|YP_003483567.1|	-	0.017	14.5	0.9	0.041	13.3	0.1	1.8	2	0	0	2	2	2	0	TFIIE	alpha	subunit
PaaX	PF07848.7	gi|289596871|ref|YP_003483567.1|	-	0.022	14.7	0.1	0.21	11.6	0.0	2.1	1	1	1	2	2	2	0	PaaX-like	protein
DUF4423	PF14394.1	gi|289596871|ref|YP_003483567.1|	-	0.052	13.0	0.2	0.24	10.9	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|289596871|ref|YP_003483567.1|	-	0.059	13.1	0.1	3.4	7.5	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
RRM_5	PF13893.1	gi|289596871|ref|YP_003483567.1|	-	0.061	13.1	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
HTH_IclR	PF09339.5	gi|289596871|ref|YP_003483567.1|	-	0.083	12.4	0.1	0.18	11.3	0.0	1.6	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|289596871|ref|YP_003483567.1|	-	0.1	11.9	0.4	0.31	10.4	0.1	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
LexA_DNA_bind	PF01726.11	gi|289596871|ref|YP_003483567.1|	-	0.14	11.7	0.1	0.28	10.7	0.0	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_5	PF01022.15	gi|289596871|ref|YP_003483567.1|	-	0.36	10.5	1.8	3.8	7.2	0.0	2.8	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
dUTPase	PF00692.14	gi|289596872|ref|YP_003483568.1|	-	3.8e-08	32.8	0.0	6.5e-08	32.0	0.0	1.4	1	1	0	1	1	1	1	dUTPase
Tubulin	PF00091.20	gi|289596873|ref|YP_003483569.1|	-	5.1e-17	62.4	0.0	6.2e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
Tubulin_2	PF13809.1	gi|289596873|ref|YP_003483569.1|	-	0.075	11.9	0.0	0.11	11.4	0.0	1.4	1	0	0	1	1	1	0	Tubulin	like
DUF1268	PF06896.6	gi|289596873|ref|YP_003483569.1|	-	0.31	11.3	3.6	0.2	12.0	1.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1268)
RHH_1	PF01402.16	gi|289596874|ref|YP_003483570.1|	-	0.00023	20.8	1.9	0.0006	19.5	0.5	2.3	2	1	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
YhfT	PF10797.4	gi|289596874|ref|YP_003483570.1|	-	0.065	12.0	0.0	0.09	11.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function
SCP2	PF02036.12	gi|289596875|ref|YP_003483571.1|	-	1.6e-07	31.5	2.0	1.8e-07	31.3	1.4	1.1	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
SRP54_N	PF02881.14	gi|289596875|ref|YP_003483571.1|	-	1.3	9.2	6.5	1.7	8.8	3.6	1.9	1	1	1	2	2	2	0	SRP54-type	protein,	helical	bundle	domain
CobA_CobO_BtuR	PF02572.10	gi|289596876|ref|YP_003483572.1|	-	3.6e-58	196.0	0.3	3.9e-58	195.8	0.2	1.0	1	0	0	1	1	1	1	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
CbiA	PF01656.18	gi|289596876|ref|YP_003483572.1|	-	0.00021	20.7	0.0	0.00037	19.9	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.12	gi|289596876|ref|YP_003483572.1|	-	0.0019	17.6	1.7	0.28	10.5	0.0	2.1	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
SRP54	PF00448.17	gi|289596876|ref|YP_003483572.1|	-	0.025	14.0	0.5	0.043	13.2	0.4	1.5	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_10	PF12846.2	gi|289596876|ref|YP_003483572.1|	-	0.1	12.0	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	AAA-like	domain
ArsA_ATPase	PF02374.10	gi|289596876|ref|YP_003483572.1|	-	0.11	11.5	1.0	0.55	9.2	0.1	2.0	2	0	0	2	2	2	0	Anion-transporting	ATPase
MS_channel	PF00924.13	gi|289596877|ref|YP_003483573.1|	-	1.1e-49	168.5	1.9	1.1e-49	168.5	1.3	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF4271	PF14093.1	gi|289596877|ref|YP_003483573.1|	-	0.24	11.0	10.3	0.35	10.5	7.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4271)
DUF4149	PF13664.1	gi|289596877|ref|YP_003483573.1|	-	1.5	8.9	7.7	2.8	8.0	5.3	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4149)
SPC12	PF06645.8	gi|289596877|ref|YP_003483573.1|	-	3.3	7.5	7.9	11	5.9	0.2	2.8	2	1	0	2	2	2	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF3810	PF12725.2	gi|289596877|ref|YP_003483573.1|	-	7.9	5.2	6.4	7.8	5.2	3.6	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3810)
Radical_SAM	PF04055.16	gi|289596878|ref|YP_003483574.1|	-	4.8e-37	127.6	1.2	9e-37	126.7	0.3	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.8	gi|289596878|ref|YP_003483574.1|	-	1.3e-27	95.9	0.1	2.2e-27	95.2	0.1	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_12	PF13353.1	gi|289596878|ref|YP_003483574.1|	-	1.5e-10	41.2	0.0	3.2e-10	40.2	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289596878|ref|YP_003483574.1|	-	3e-10	40.1	0.0	6.4e-10	39.1	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Penicillinase_R	PF03965.11	gi|289596880|ref|YP_003483576.1|	-	0.041	13.9	0.3	1.4	9.0	0.0	2.9	3	0	0	3	3	3	0	Penicillinase	repressor
DUF1160	PF06648.6	gi|289596881|ref|YP_003483577.1|	-	0.095	12.4	0.1	0.14	11.9	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1160)
TAF	PF02969.12	gi|289596881|ref|YP_003483577.1|	-	0.27	11.2	1.5	11	6.0	0.2	2.2	1	1	1	2	2	2	0	TATA	box	binding	protein	associated	factor	(TAF)
AAA_14	PF13173.1	gi|289596882|ref|YP_003483578.1|	-	1.3e-08	34.8	0.0	4.4e-08	33.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
DUF234	PF03008.9	gi|289596882|ref|YP_003483578.1|	-	0.00025	21.1	0.1	0.00066	19.7	0.1	1.7	1	0	0	1	1	1	1	Archaea	bacterial	proteins	of	unknown	function
AAA_22	PF13401.1	gi|289596882|ref|YP_003483578.1|	-	0.00038	20.6	0.0	1.1	9.3	0.0	2.6	1	1	1	2	2	2	2	AAA	domain
DUF4143	PF13635.1	gi|289596882|ref|YP_003483578.1|	-	0.0031	17.6	0.2	0.011	15.9	0.1	1.9	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
PqqD	PF05402.7	gi|289596882|ref|YP_003483578.1|	-	0.011	15.7	0.0	0.46	10.5	0.0	2.5	2	0	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
Viral_helicase1	PF01443.13	gi|289596882|ref|YP_003483578.1|	-	0.03	13.8	0.0	0.055	12.9	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
NERD	PF08378.6	gi|289596882|ref|YP_003483578.1|	-	0.031	14.5	0.0	0.083	13.1	0.0	1.7	1	0	0	1	1	1	0	Nuclease-related	domain
Arch_ATPase	PF01637.13	gi|289596882|ref|YP_003483578.1|	-	0.039	13.6	6.5	0.071	12.8	0.2	3.2	2	1	1	3	3	3	0	Archaeal	ATPase
RHH_1	PF01402.16	gi|289596883|ref|YP_003483579.1|	-	2.3e-05	24.0	1.8	2.3e-05	24.0	1.2	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|289596883|ref|YP_003483579.1|	-	0.015	15.0	0.3	6.2	6.6	0.0	2.6	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
Pox_VLTF3	PF04947.9	gi|289596883|ref|YP_003483579.1|	-	0.13	11.7	3.2	0.11	11.9	0.5	1.9	1	1	1	2	2	2	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
RloB	PF13707.1	gi|289596883|ref|YP_003483579.1|	-	0.45	10.1	5.7	0.68	9.5	1.0	2.2	1	1	1	2	2	2	0	RloB-like	protein
NosD	PF05048.8	gi|289596884|ref|YP_003483580.1|	-	5.8e-53	179.4	117.2	2.2e-34	118.6	33.0	4.5	2	1	3	5	5	5	4	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289596884|ref|YP_003483580.1|	-	8e-31	106.9	110.8	3.6e-14	52.7	21.6	5.4	2	1	4	6	6	6	4	Right	handed	beta	helix	region
fn3	PF00041.16	gi|289596884|ref|YP_003483580.1|	-	3.5e-08	33.4	2.5	3.5e-08	33.4	1.7	3.0	3	0	0	3	3	3	1	Fibronectin	type	III	domain
Peptidase_C1	PF00112.18	gi|289596884|ref|YP_003483580.1|	-	6.8e-08	32.6	1.6	2e-07	31.1	1.1	1.8	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Pectate_lyase_3	PF12708.2	gi|289596884|ref|YP_003483580.1|	-	5.1e-05	23.5	37.3	0.00013	22.1	10.6	4.9	1	1	2	4	4	4	2	Pectate	lyase	superfamily	protein
Peptidase_C1_2	PF03051.10	gi|289596884|ref|YP_003483580.1|	-	0.00017	20.2	0.1	0.0003	19.4	0.1	1.3	1	0	0	1	1	1	1	Peptidase	C1-like	family
ApoL	PF05461.6	gi|289596884|ref|YP_003483580.1|	-	0.21	10.7	0.0	0.32	10.2	0.0	1.1	1	0	0	1	1	1	0	Apolipoprotein	L
Pox_A51	PF04948.8	gi|289596885|ref|YP_003483581.1|	-	0.073	11.7	0.0	0.074	11.7	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	A51	protein
EntA_Immun	PF08951.5	gi|289596886|ref|YP_003483582.1|	-	0.016	15.3	1.1	0.017	15.2	0.8	1.2	1	0	0	1	1	1	0	Enterocin	A	Immunity
AAA_14	PF13173.1	gi|289596887|ref|YP_003483583.1|	-	2.6e-38	130.7	0.7	2.6e-38	130.7	0.5	2.6	3	0	0	3	3	3	1	AAA	domain
DUF4143	PF13635.1	gi|289596887|ref|YP_003483583.1|	-	5.6e-10	39.2	0.5	4.5e-09	36.3	0.1	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|289596887|ref|YP_003483583.1|	-	8e-07	28.9	4.9	0.00034	20.3	0.1	3.1	2	1	1	3	3	3	2	Archaeal	ATPase
MobB	PF03205.9	gi|289596887|ref|YP_003483583.1|	-	0.036	13.7	0.7	0.45	10.2	0.0	2.5	3	0	0	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|289596887|ref|YP_003483583.1|	-	0.061	13.5	0.0	0.16	12.1	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|289596887|ref|YP_003483583.1|	-	0.15	11.4	0.0	0.35	10.2	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
EcoEI_R_C	PF08463.5	gi|289596888|ref|YP_003483584.1|	-	0.0014	18.4	3.0	0.0018	18.1	2.1	1.1	1	0	0	1	1	1	1	EcoEI	R	protein	C-terminal
CCDC-167	PF15188.1	gi|289596888|ref|YP_003483584.1|	-	0.013	15.4	6.4	0.016	15.1	4.4	1.2	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	167
Hemerythrin	PF01814.18	gi|289596888|ref|YP_003483584.1|	-	0.015	15.4	0.5	0.021	15.0	0.3	1.2	1	0	0	1	1	1	0	Hemerythrin	HHE	cation	binding	domain
IncA	PF04156.9	gi|289596888|ref|YP_003483584.1|	-	0.021	14.4	4.5	0.024	14.2	3.1	1.0	1	0	0	1	1	1	0	IncA	protein
DUF3486	PF11985.3	gi|289596888|ref|YP_003483584.1|	-	0.025	14.6	0.3	0.026	14.5	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3486)
CALCOCO1	PF07888.6	gi|289596888|ref|YP_003483584.1|	-	0.025	12.9	2.3	0.027	12.7	1.6	1.0	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
RGCC	PF15151.1	gi|289596888|ref|YP_003483584.1|	-	0.033	14.6	0.3	0.06	13.7	0.1	1.5	1	1	0	1	1	1	0	Response	gene	to	complement	32	protein	family
Unstab_antitox	PF09720.5	gi|289596888|ref|YP_003483584.1|	-	0.035	13.7	4.3	0.057	13.1	3.0	1.5	1	1	0	1	1	1	0	Putative	addiction	module	component
UBN2	PF14223.1	gi|289596888|ref|YP_003483584.1|	-	0.043	13.6	1.1	0.056	13.2	0.8	1.2	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
RPW8	PF05659.6	gi|289596888|ref|YP_003483584.1|	-	0.079	12.5	0.6	0.086	12.3	0.4	1.1	1	0	0	1	1	1	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
ISG65-75	PF11727.3	gi|289596888|ref|YP_003483584.1|	-	0.08	11.9	0.3	0.087	11.8	0.2	1.0	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
Cauli_AT	PF03233.8	gi|289596888|ref|YP_003483584.1|	-	0.12	12.0	1.8	0.14	11.8	1.3	1.1	1	0	0	1	1	1	0	Aphid	transmission	protein
DUF4404	PF14357.1	gi|289596888|ref|YP_003483584.1|	-	0.14	12.6	2.4	0.17	12.3	1.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
APG6	PF04111.7	gi|289596888|ref|YP_003483584.1|	-	0.18	10.8	2.6	0.18	10.7	1.8	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Mei5	PF10376.4	gi|289596888|ref|YP_003483584.1|	-	0.2	11.1	5.8	0.24	10.8	4.0	1.1	1	0	0	1	1	1	0	Double-strand	recombination	repair	protein
AF0941-like	PF14591.1	gi|289596888|ref|YP_003483584.1|	-	0.2	11.6	6.4	0.23	11.5	4.4	1.1	1	0	0	1	1	1	0	AF0941-like
Ribosomal_S6	PF01250.12	gi|289596888|ref|YP_003483584.1|	-	0.3	10.9	2.0	0.62	9.9	0.5	1.9	1	1	1	2	2	2	0	Ribosomal	protein	S6
AAA_23	PF13476.1	gi|289596888|ref|YP_003483584.1|	-	0.88	9.8	5.4	1.1	9.6	3.7	1.1	1	0	0	1	1	1	0	AAA	domain
DivIC	PF04977.10	gi|289596888|ref|YP_003483584.1|	-	1.2	8.6	4.7	14	5.2	3.2	2.0	1	1	0	1	1	1	0	Septum	formation	initiator
MerR-DNA-bind	PF09278.6	gi|289596888|ref|YP_003483584.1|	-	2.3	8.6	5.9	14	6.1	0.4	2.2	2	0	0	2	2	2	0	MerR,	DNA	binding
HTH_20	PF12840.2	gi|289596890|ref|YP_003483586.1|	-	0.0011	18.7	0.0	0.0016	18.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|289596890|ref|YP_003483586.1|	-	0.073	12.7	0.2	0.13	11.9	0.2	1.5	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HEAT_2	PF13646.1	gi|289596890|ref|YP_003483586.1|	-	0.12	12.7	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	HEAT	repeats
HTH_17	PF12728.2	gi|289596890|ref|YP_003483586.1|	-	0.12	12.6	0.7	2.1	8.6	0.3	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
Phage_integrase	PF00589.17	gi|289596891|ref|YP_003483587.1|	-	8.2e-21	74.4	0.0	2.9e-20	72.6	0.0	1.8	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|289596891|ref|YP_003483587.1|	-	0.00026	21.0	5.3	0.00032	20.8	0.4	3.1	4	0	0	4	4	4	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|289596891|ref|YP_003483587.1|	-	0.0097	16.2	2.5	0.22	11.8	0.6	2.9	2	1	1	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|289596891|ref|YP_003483587.1|	-	0.012	15.3	0.1	0.49	10.1	0.0	2.6	1	1	1	2	2	2	0	Integrase
Lumazine_bd	PF12870.2	gi|289596891|ref|YP_003483587.1|	-	0.026	14.5	2.0	0.11	12.5	1.4	2.0	2	0	0	2	2	2	0	Lumazine-binding	domain
Zw10	PF06248.8	gi|289596891|ref|YP_003483587.1|	-	0.034	12.2	0.7	0.048	11.8	0.5	1.2	1	0	0	1	1	1	0	Centromere/kinetochore	Zw10
ELFV_dehydrog	PF00208.16	gi|289596893|ref|YP_003483589.1|	-	1.8e-75	253.7	0.6	2.2e-75	253.3	0.4	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|289596893|ref|YP_003483589.1|	-	2.9e-45	153.0	0.0	4.8e-45	152.3	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
TIP49	PF06068.8	gi|289596894|ref|YP_003483590.1|	-	3e-160	533.3	5.4	3.5e-160	533.0	3.8	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|289596894|ref|YP_003483590.1|	-	8.8e-10	38.8	0.3	2.8e-07	30.8	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|289596894|ref|YP_003483590.1|	-	1e-09	37.8	1.9	2.4e-06	26.7	0.0	3.1	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|289596894|ref|YP_003483590.1|	-	8.8e-06	25.8	0.2	0.057	13.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|289596894|ref|YP_003483590.1|	-	1.3e-05	25.2	0.1	0.0026	17.7	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|289596894|ref|YP_003483590.1|	-	2.2e-05	25.2	1.6	5.9e-05	23.8	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|289596894|ref|YP_003483590.1|	-	3.7e-05	22.9	0.2	0.00019	20.6	0.0	2.2	2	0	0	2	2	2	1	Zeta	toxin
DnaB_C	PF03796.10	gi|289596894|ref|YP_003483590.1|	-	7.3e-05	21.7	0.0	0.00013	20.9	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_18	PF13238.1	gi|289596894|ref|YP_003483590.1|	-	0.00018	21.8	3.4	0.00037	20.7	0.2	3.0	2	2	1	3	3	3	1	AAA	domain
AAA_19	PF13245.1	gi|289596894|ref|YP_003483590.1|	-	0.00039	20.1	0.0	0.00089	18.9	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_25	PF13481.1	gi|289596894|ref|YP_003483590.1|	-	0.00068	19.0	0.0	0.002	17.5	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|289596894|ref|YP_003483590.1|	-	0.00076	19.3	0.1	0.0025	17.7	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|289596894|ref|YP_003483590.1|	-	0.0019	18.0	0.1	0.26	11.1	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.16	gi|289596894|ref|YP_003483590.1|	-	0.0023	17.1	0.2	0.089	11.9	0.1	2.3	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DNA_pol3_delta	PF06144.8	gi|289596894|ref|YP_003483590.1|	-	0.0025	17.3	0.0	0.006	16.1	0.0	1.6	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|289596894|ref|YP_003483590.1|	-	0.0029	17.0	0.1	0.0068	15.8	0.1	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|289596894|ref|YP_003483590.1|	-	0.0035	16.2	0.6	0.29	9.9	0.0	2.6	1	1	1	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_5	PF07728.9	gi|289596894|ref|YP_003483590.1|	-	0.0043	16.7	0.1	0.35	10.6	0.0	2.7	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.17	gi|289596894|ref|YP_003483590.1|	-	0.0054	16.8	0.1	0.034	14.3	0.1	2.3	1	1	0	1	1	1	1	RNA	helicase
Zot	PF05707.7	gi|289596894|ref|YP_003483590.1|	-	0.0055	16.1	0.3	1.7	8.0	0.0	2.7	2	1	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
NACHT	PF05729.7	gi|289596894|ref|YP_003483590.1|	-	0.0069	16.0	0.0	0.018	14.6	0.0	1.7	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|289596894|ref|YP_003483590.1|	-	0.0087	15.7	0.4	0.0087	15.7	0.3	2.9	2	2	0	2	2	2	1	Archaeal	ATPase
DUF2075	PF09848.4	gi|289596894|ref|YP_003483590.1|	-	0.01	14.8	0.0	0.016	14.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|289596894|ref|YP_003483590.1|	-	0.011	14.8	0.4	0.032	13.3	0.1	2.0	2	0	0	2	2	2	0	KaiC
AAA_28	PF13521.1	gi|289596894|ref|YP_003483590.1|	-	0.011	15.6	0.4	0.055	13.4	0.0	2.3	3	0	0	3	3	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|289596894|ref|YP_003483590.1|	-	0.012	15.1	0.6	0.018	14.5	0.0	1.5	2	0	0	2	2	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Mgm101p	PF06420.7	gi|289596894|ref|YP_003483590.1|	-	0.024	13.9	0.1	0.048	12.9	0.1	1.4	1	0	0	1	1	1	0	Mitochondrial	genome	maintenance	MGM101
ResIII	PF04851.10	gi|289596894|ref|YP_003483590.1|	-	0.026	14.3	0.4	0.053	13.3	0.2	1.8	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
GvpD	PF07088.6	gi|289596894|ref|YP_003483590.1|	-	0.027	12.8	0.1	0.23	9.7	0.0	2.1	1	1	1	2	2	2	0	GvpD	gas	vesicle	protein
UPF0079	PF02367.12	gi|289596894|ref|YP_003483590.1|	-	0.029	14.0	0.0	0.071	12.7	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_30	PF13604.1	gi|289596894|ref|YP_003483590.1|	-	0.04	13.5	0.2	3.4	7.1	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|289596894|ref|YP_003483590.1|	-	0.04	14.2	0.0	0.11	12.8	0.0	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_11	PF13086.1	gi|289596894|ref|YP_003483590.1|	-	0.042	13.4	0.4	0.11	12.0	0.2	2.0	1	1	1	2	2	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|289596894|ref|YP_003483590.1|	-	0.056	12.9	0.1	0.88	9.0	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|289596894|ref|YP_003483590.1|	-	0.074	11.9	0.0	0.13	11.0	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
DNA_pol3_delta2	PF13177.1	gi|289596894|ref|YP_003483590.1|	-	0.088	12.4	1.4	0.22	11.1	0.1	2.5	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
Sipho_tail	PF05709.6	gi|289596894|ref|YP_003483590.1|	-	0.13	11.3	0.0	0.2	10.7	0.0	1.3	1	0	0	1	1	1	0	Phage	tail	protein
FtsK_SpoIIIE	PF01580.13	gi|289596894|ref|YP_003483590.1|	-	0.38	10.1	3.3	12	5.2	2.3	2.6	1	1	0	1	1	1	0	FtsK/SpoIIIE	family
EamA	PF00892.15	gi|289596895|ref|YP_003483591.1|	-	1.6e-29	102.5	40.4	2.2e-16	60.0	13.4	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|289596895|ref|YP_003483591.1|	-	2.3e-08	34.2	30.4	1.4e-07	31.7	6.1	3.1	1	1	2	3	3	3	2	Multidrug	resistance	efflux	transporter
UPF0546	PF10639.4	gi|289596895|ref|YP_003483591.1|	-	0.066	13.0	0.4	0.066	13.0	0.3	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0546
DDE_Tnp_1	PF01609.16	gi|289596896|ref|YP_003483592.1|	-	7.7e-20	71.3	0.3	1.6e-19	70.2	0.2	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289596896|ref|YP_003483592.1|	-	0.00019	21.1	0.0	0.00019	21.1	0.0	1.5	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|289596896|ref|YP_003483592.1|	-	0.0014	18.6	0.1	0.0034	17.3	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|289596896|ref|YP_003483592.1|	-	0.092	12.9	2.1	0.26	11.4	0.4	2.3	2	1	0	2	2	2	0	Transposase	DDE	domain
HTH_38	PF13936.1	gi|289596896|ref|YP_003483592.1|	-	0.096	12.2	1.0	0.31	10.6	0.7	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
DEAD	PF00270.24	gi|289596897|ref|YP_003483593.1|	-	3.9e-36	124.0	0.0	1.2e-35	122.5	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|289596897|ref|YP_003483593.1|	-	1.6e-27	96.4	0.0	3.4e-27	95.3	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|289596897|ref|YP_003483593.1|	-	8.5e-18	63.9	0.0	1.6e-16	59.9	0.0	2.7	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|289596897|ref|YP_003483593.1|	-	8.9e-05	22.3	0.0	0.00045	20.0	0.0	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|289596897|ref|YP_003483593.1|	-	0.012	14.4	0.0	0.021	13.6	0.0	1.3	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
SecA_DEAD	PF07517.9	gi|289596897|ref|YP_003483593.1|	-	0.015	14.6	0.0	0.02	14.2	0.0	1.5	1	1	0	1	1	1	0	SecA	DEAD-like	domain
zf-ribbon_3	PF13248.1	gi|289596897|ref|YP_003483593.1|	-	0.069	12.3	0.4	0.14	11.4	0.2	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.14	gi|289596897|ref|YP_003483593.1|	-	0.072	12.7	0.0	0.16	11.6	0.0	1.5	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Asparaginase	PF00710.15	gi|289596898|ref|YP_003483594.1|	-	1.6e-96	322.8	0.0	2e-96	322.5	0.0	1.0	1	0	0	1	1	1	1	Asparaginase
GatB_N	PF02934.10	gi|289596899|ref|YP_003483595.1|	-	4.8e-72	242.2	0.6	6.4e-72	241.8	0.4	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|289596899|ref|YP_003483595.1|	-	1.1e-10	41.3	2.9	4.5e-10	39.4	2.0	2.0	1	0	0	1	1	1	1	GatB	domain
GAD	PF02938.9	gi|289596899|ref|YP_003483595.1|	-	1.6e-06	28.1	0.1	6.6e-06	26.2	0.1	2.1	1	0	0	1	1	1	1	GAD	domain
YqeY	PF09424.5	gi|289596899|ref|YP_003483595.1|	-	0.087	12.6	5.3	0.14	12.0	0.3	2.9	2	0	0	2	2	2	0	Yqey-like	protein
Peptidase_C25	PF01364.13	gi|289596900|ref|YP_003483596.1|	-	1.4e-65	221.7	10.8	2.6e-65	220.8	7.5	1.5	1	0	0	1	1	1	1	Peptidase	family	C25
CARDB	PF07705.6	gi|289596900|ref|YP_003483596.1|	-	2.8e-12	46.5	23.7	1.2e-06	28.4	0.4	6.9	7	0	0	7	7	5	2	CARDB
Big_3_4	PF13754.1	gi|289596900|ref|YP_003483596.1|	-	2.7e-10	40.4	10.5	1.9e-09	37.6	1.0	5.6	6	1	0	6	6	3	2	Bacterial	Ig-like	domain	(group	3)
IncA	PF04156.9	gi|289596900|ref|YP_003483596.1|	-	7.9e-10	38.6	11.7	3e-07	30.2	6.6	2.3	1	1	1	2	2	2	1	IncA	protein
Propeptide_C25	PF08126.6	gi|289596900|ref|YP_003483596.1|	-	1.7e-08	33.7	1.9	4.1e-08	32.4	1.3	1.6	1	0	0	1	1	1	1	Propeptide_C25
AAA_13	PF13166.1	gi|289596900|ref|YP_003483596.1|	-	1e-07	30.8	21.5	1.6e-07	30.1	14.9	1.2	1	0	0	1	1	1	1	AAA	domain
CUB	PF00431.15	gi|289596900|ref|YP_003483596.1|	-	1.7e-07	31.2	0.1	4.6e-07	29.8	0.0	1.7	1	0	0	1	1	1	1	CUB	domain
Reo_sigmaC	PF04582.7	gi|289596900|ref|YP_003483596.1|	-	1.2e-06	27.9	13.0	2.2e-06	27.0	9.0	1.3	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
FlaC_arch	PF05377.6	gi|289596900|ref|YP_003483596.1|	-	1.1e-05	25.2	21.8	0.0017	18.1	3.7	3.6	2	1	1	3	3	3	2	Flagella	accessory	protein	C	(FlaC)
Atg14	PF10186.4	gi|289596900|ref|YP_003483596.1|	-	3.1e-05	23.0	6.9	5.8e-05	22.1	4.8	1.3	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF3584	PF12128.3	gi|289596900|ref|YP_003483596.1|	-	3.2e-05	21.5	8.5	4.5e-05	21.0	5.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Laminin_I	PF06008.9	gi|289596900|ref|YP_003483596.1|	-	3.5e-05	23.2	20.1	0.0015	17.9	3.9	2.1	1	1	1	2	2	2	2	Laminin	Domain	I
DUF1664	PF07889.7	gi|289596900|ref|YP_003483596.1|	-	6.2e-05	22.8	15.6	0.0087	15.8	7.1	2.6	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1664)
Cast	PF10174.4	gi|289596900|ref|YP_003483596.1|	-	6.3e-05	21.2	8.1	9.2e-05	20.7	5.6	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
Filament	PF00038.16	gi|289596900|ref|YP_003483596.1|	-	0.00013	21.5	11.2	0.027	13.9	0.1	2.1	1	1	1	2	2	2	1	Intermediate	filament	protein
NPV_P10	PF05531.7	gi|289596900|ref|YP_003483596.1|	-	0.00014	22.0	25.7	0.52	10.5	8.8	3.6	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.6	gi|289596900|ref|YP_003483596.1|	-	0.00019	20.2	22.0	0.0011	17.6	4.0	2.2	1	1	1	2	2	2	2	Spc7	kinetochore	protein
DUF4407	PF14362.1	gi|289596900|ref|YP_003483596.1|	-	0.00025	20.1	3.5	0.00044	19.3	2.4	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4407)
Baculo_PEP_C	PF04513.7	gi|289596900|ref|YP_003483596.1|	-	0.0003	20.6	38.2	0.037	13.8	20.0	2.5	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Tropomyosin_1	PF12718.2	gi|289596900|ref|YP_003483596.1|	-	0.00031	20.6	2.2	0.00031	20.6	1.6	2.9	2	1	1	3	3	2	1	Tropomyosin	like
TBPIP	PF07106.8	gi|289596900|ref|YP_003483596.1|	-	0.00038	20.0	19.8	0.0085	15.6	3.1	2.4	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
WEMBL	PF05701.6	gi|289596900|ref|YP_003483596.1|	-	0.0005	18.6	6.9	0.00087	17.8	4.8	1.3	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
Myosin_tail_1	PF01576.14	gi|289596900|ref|YP_003483596.1|	-	0.00067	17.5	12.1	0.0012	16.6	8.4	1.3	1	0	0	1	1	1	1	Myosin	tail
TMF_TATA_bd	PF12325.3	gi|289596900|ref|YP_003483596.1|	-	0.00072	19.2	11.5	0.07	12.8	0.7	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	TATA	binding
Apolipoprotein	PF01442.13	gi|289596900|ref|YP_003483596.1|	-	0.0011	18.5	1.1	0.0017	17.9	0.7	1.2	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
TRAP_beta	PF05753.9	gi|289596900|ref|YP_003483596.1|	-	0.0011	18.1	1.1	0.072	12.2	0.0	2.8	2	0	0	2	2	2	1	Translocon-associated	protein	beta	(TRAPB)
Prefoldin_2	PF01920.15	gi|289596900|ref|YP_003483596.1|	-	0.0012	18.5	12.4	0.43	10.3	6.1	3.6	1	1	1	2	2	2	1	Prefoldin	subunit
MscS_porin	PF12795.2	gi|289596900|ref|YP_003483596.1|	-	0.0019	17.5	27.0	0.012	14.8	5.0	2.2	1	1	1	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
Laminin_II	PF06009.7	gi|289596900|ref|YP_003483596.1|	-	0.002	17.8	22.7	0.021	14.6	15.6	2.2	1	1	0	1	1	1	1	Laminin	Domain	II
DUF812	PF05667.6	gi|289596900|ref|YP_003483596.1|	-	0.0021	16.6	4.2	0.0021	16.6	2.9	2.7	2	1	1	3	3	2	1	Protein	of	unknown	function	(DUF812)
DUF2968	PF11180.3	gi|289596900|ref|YP_003483596.1|	-	0.0021	17.4	8.2	0.0041	16.5	0.0	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2968)
DUF4164	PF13747.1	gi|289596900|ref|YP_003483596.1|	-	0.0023	18.0	2.3	0.0023	18.0	1.6	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4164)
DUF4631	PF15450.1	gi|289596900|ref|YP_003483596.1|	-	0.0026	16.1	6.4	0.0044	15.3	4.4	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4631)
V_ATPase_I	PF01496.14	gi|289596900|ref|YP_003483596.1|	-	0.0032	15.4	13.1	0.0037	15.2	7.2	1.9	1	1	1	2	2	2	1	V-type	ATPase	116kDa	subunit	family
TPR_MLP1_2	PF07926.7	gi|289596900|ref|YP_003483596.1|	-	0.0032	17.1	22.0	0.032	13.9	13.3	2.4	1	1	1	2	2	2	1	TPR/MLP1/MLP2-like	protein
Prefoldin	PF02996.12	gi|289596900|ref|YP_003483596.1|	-	0.0034	17.0	15.6	0.37	10.4	0.1	3.5	1	1	2	3	3	3	2	Prefoldin	subunit
DUF948	PF06103.6	gi|289596900|ref|YP_003483596.1|	-	0.0037	17.0	22.5	0.014	15.2	1.9	3.8	1	1	2	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF948)
FliD_C	PF07195.7	gi|289596900|ref|YP_003483596.1|	-	0.0047	16.2	6.1	0.0047	16.2	4.2	3.2	1	1	1	2	2	2	1	Flagellar	hook-associated	protein	2	C-terminus
CENP-F_leu_zip	PF10473.4	gi|289596900|ref|YP_003483596.1|	-	0.0053	16.6	1.0	0.0053	16.6	0.7	2.4	2	1	1	3	3	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
FAM176	PF14851.1	gi|289596900|ref|YP_003483596.1|	-	0.0055	16.4	0.1	0.013	15.2	0.1	1.6	1	0	0	1	1	1	1	FAM176	family
Taxilin	PF09728.4	gi|289596900|ref|YP_003483596.1|	-	0.0055	15.8	6.0	0.0084	15.2	4.2	1.1	1	0	0	1	1	1	1	Myosin-like	coiled-coil	protein
MAD	PF05557.8	gi|289596900|ref|YP_003483596.1|	-	0.008	14.3	14.6	0.012	13.8	10.1	1.1	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
PspA_IM30	PF04012.7	gi|289596900|ref|YP_003483596.1|	-	0.0092	15.3	5.3	0.048	13.0	3.6	1.9	1	1	0	1	1	1	1	PspA/IM30	family
EzrA	PF06160.7	gi|289596900|ref|YP_003483596.1|	-	0.0097	14.1	15.2	0.03	12.5	10.5	1.7	1	1	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
DUF2730	PF10805.3	gi|289596900|ref|YP_003483596.1|	-	0.012	15.3	6.9	0.22	11.2	0.1	2.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
SF-assemblin	PF06705.6	gi|289596900|ref|YP_003483596.1|	-	0.014	14.5	19.4	0.056	12.5	13.5	1.8	1	1	0	1	1	1	0	SF-assemblin/beta	giardin
Snapin_Pallidin	PF14712.1	gi|289596900|ref|YP_003483596.1|	-	0.015	15.6	15.1	0.32	11.3	0.9	2.6	1	1	0	2	2	2	0	Snapin/Pallidin
CALCOCO1	PF07888.6	gi|289596900|ref|YP_003483596.1|	-	0.017	13.4	10.0	0.03	12.6	6.9	1.3	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
DUF1640	PF07798.6	gi|289596900|ref|YP_003483596.1|	-	0.019	14.9	6.0	0.041	13.9	4.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
Tweety	PF04906.8	gi|289596900|ref|YP_003483596.1|	-	0.02	13.3	3.2	0.038	12.3	2.2	1.4	1	0	0	1	1	1	0	Tweety
Lebercilin	PF15619.1	gi|289596900|ref|YP_003483596.1|	-	0.021	14.2	7.3	0.036	13.4	5.0	1.3	1	0	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
SlyX	PF04102.7	gi|289596900|ref|YP_003483596.1|	-	0.022	15.1	13.2	0.58	10.5	4.8	2.9	1	1	0	2	2	2	0	SlyX
DUF869	PF05911.6	gi|289596900|ref|YP_003483596.1|	-	0.025	12.8	11.9	0.037	12.2	8.2	1.2	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
AAA_27	PF13514.1	gi|289596900|ref|YP_003483596.1|	-	0.026	12.2	6.3	0.04	11.6	4.3	1.2	1	0	0	1	1	1	0	AAA	domain
APG6	PF04111.7	gi|289596900|ref|YP_003483596.1|	-	0.028	13.4	11.4	0.055	12.5	7.9	1.4	1	0	0	1	1	1	0	Autophagy	protein	Apg6
ADIP	PF11559.3	gi|289596900|ref|YP_003483596.1|	-	0.03	14.2	19.4	0.1	12.5	1.8	2.3	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Fib_alpha	PF08702.5	gi|289596900|ref|YP_003483596.1|	-	0.035	14.2	22.5	0.13	12.3	12.7	2.4	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Phage_GP20	PF06810.6	gi|289596900|ref|YP_003483596.1|	-	0.036	13.4	23.2	0.095	12.1	2.6	3.2	1	1	2	3	3	3	0	Phage	minor	structural	protein	GP20
Syntaxin	PF00804.20	gi|289596900|ref|YP_003483596.1|	-	0.038	14.1	24.2	2.7	8.1	16.6	2.6	1	1	1	2	2	2	0	Syntaxin
AAA_32	PF13654.1	gi|289596900|ref|YP_003483596.1|	-	0.04	12.5	3.9	0.065	11.8	2.7	1.3	1	0	0	1	1	1	0	AAA	domain
Fez1	PF06818.10	gi|289596900|ref|YP_003483596.1|	-	0.043	13.8	5.3	0.071	13.1	3.7	1.2	1	0	0	1	1	1	0	Fez1
COG7	PF10191.4	gi|289596900|ref|YP_003483596.1|	-	0.044	11.6	9.4	0.069	11.0	0.2	2.1	1	1	1	2	2	2	0	Golgi	complex	component	7	(COG7)
AKNA	PF12443.3	gi|289596900|ref|YP_003483596.1|	-	0.05	13.6	5.2	1.8	8.6	0.9	3.1	1	1	2	3	3	3	0	AT-hook-containing	transcription	factor
FliJ	PF02050.11	gi|289596900|ref|YP_003483596.1|	-	0.058	13.4	11.2	0.21	11.6	0.3	2.4	1	1	2	3	3	3	0	Flagellar	FliJ	protein
Uds1	PF15456.1	gi|289596900|ref|YP_003483596.1|	-	0.061	13.3	5.5	0.51	10.3	1.8	2.6	1	1	2	3	3	3	0	Up-regulated	During	Septation
Striatin	PF08232.7	gi|289596900|ref|YP_003483596.1|	-	0.073	13.3	11.9	0.094	13.0	4.7	2.3	1	1	1	2	2	2	0	Striatin	family
DUF4349	PF14257.1	gi|289596900|ref|YP_003483596.1|	-	0.074	12.2	8.8	1.6	7.9	0.1	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4349)
EMP24_GP25L	PF01105.19	gi|289596900|ref|YP_003483596.1|	-	0.077	12.7	9.6	0.47	10.1	1.2	2.9	1	1	1	2	2	2	0	emp24/gp25L/p24	family/GOLD
GAS	PF13851.1	gi|289596900|ref|YP_003483596.1|	-	0.097	11.8	16.8	0.37	9.9	11.5	1.8	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
BRE1	PF08647.6	gi|289596900|ref|YP_003483596.1|	-	0.11	12.4	11.5	1.5	8.8	2.3	2.4	1	1	1	2	2	2	0	BRE1	E3	ubiquitin	ligase
DUF3450	PF11932.3	gi|289596900|ref|YP_003483596.1|	-	0.12	11.6	18.6	0.057	12.6	3.7	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
HsbA	PF12296.3	gi|289596900|ref|YP_003483596.1|	-	0.13	12.1	24.5	5.9	6.7	12.8	3.5	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
DUF904	PF06005.7	gi|289596900|ref|YP_003483596.1|	-	0.17	12.2	17.2	0.18	12.1	0.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
V-SNARE	PF05008.10	gi|289596900|ref|YP_003483596.1|	-	0.18	12.0	12.7	3.9	7.6	5.5	2.7	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
ATG16	PF08614.6	gi|289596900|ref|YP_003483596.1|	-	0.19	11.5	19.0	8.2	6.2	0.1	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
HCMV_UL139	PF12507.3	gi|289596900|ref|YP_003483596.1|	-	0.21	11.7	1.8	4.6	7.4	0.2	2.5	1	1	1	2	2	2	0	Human	Cytomegalovirus	UL139	protein
Spectrin	PF00435.16	gi|289596900|ref|YP_003483596.1|	-	0.23	11.7	9.4	2.4	8.4	0.2	2.4	1	1	1	2	2	2	0	Spectrin	repeat
COG5	PF10392.4	gi|289596900|ref|YP_003483596.1|	-	0.24	11.3	13.2	3	7.8	0.6	2.4	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
DUF4140	PF13600.1	gi|289596900|ref|YP_003483596.1|	-	0.3	11.5	5.9	9	6.8	0.0	3.8	1	1	2	3	3	3	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF972	PF06156.8	gi|289596900|ref|YP_003483596.1|	-	0.3	11.4	17.3	0.71	10.2	1.4	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
RmuC	PF02646.11	gi|289596900|ref|YP_003483596.1|	-	0.31	9.8	12.5	1	8.1	2.4	2.4	1	1	2	3	3	3	0	RmuC	family
DUF641	PF04859.7	gi|289596900|ref|YP_003483596.1|	-	0.37	10.5	8.3	11	5.8	0.5	2.7	1	1	2	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
Bacillus_HBL	PF05791.6	gi|289596900|ref|YP_003483596.1|	-	0.38	10.1	23.4	0.18	11.1	4.4	2.7	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
WXG100	PF06013.7	gi|289596900|ref|YP_003483596.1|	-	0.45	10.5	12.8	1.2	9.2	1.1	3.6	2	1	2	4	4	3	0	Proteins	of	100	residues	with	WXG
Herpes_UL6	PF01763.11	gi|289596900|ref|YP_003483596.1|	-	0.47	8.5	13.3	0.32	9.1	7.5	1.7	1	1	1	2	2	2	0	Herpesvirus	UL6	like
Lectin_N	PF03954.9	gi|289596900|ref|YP_003483596.1|	-	0.51	9.7	11.9	0.047	13.0	2.6	2.3	1	1	1	2	2	2	0	Hepatic	lectin,	N-terminal	domain
Prominin	PF05478.6	gi|289596900|ref|YP_003483596.1|	-	0.59	7.5	20.2	4.9	4.5	13.9	1.8	1	1	1	2	2	2	0	Prominin
DUF4201	PF13870.1	gi|289596900|ref|YP_003483596.1|	-	0.65	9.4	14.3	1.2	8.5	1.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
GLE1	PF07817.8	gi|289596900|ref|YP_003483596.1|	-	0.72	8.7	19.7	0.069	12.0	2.8	2.4	1	1	1	2	2	2	0	GLE1-like	protein
COG2	PF06148.6	gi|289596900|ref|YP_003483596.1|	-	0.73	9.7	10.9	5.5	6.8	0.1	2.6	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
LUC7	PF03194.10	gi|289596900|ref|YP_003483596.1|	-	0.76	9.2	6.0	1.2	8.5	4.1	1.3	1	0	0	1	1	1	0	LUC7	N_terminus
USP8_interact	PF08941.5	gi|289596900|ref|YP_003483596.1|	-	0.77	9.0	6.6	1.4	8.2	0.5	2.3	2	0	0	2	2	2	0	USP8	interacting
BLOC1_2	PF10046.4	gi|289596900|ref|YP_003483596.1|	-	0.78	9.9	22.8	6.2	7.0	8.5	2.6	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Seryl_tRNA_N	PF02403.17	gi|289596900|ref|YP_003483596.1|	-	0.78	9.7	19.0	2	8.4	3.7	2.6	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF4559	PF15112.1	gi|289596900|ref|YP_003483596.1|	-	0.86	8.6	13.8	4.7	6.2	9.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF1515	PF07439.6	gi|289596900|ref|YP_003483596.1|	-	0.93	9.3	2.1	8.2	6.2	0.2	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1515)
EAP30	PF04157.11	gi|289596900|ref|YP_003483596.1|	-	1.1	8.4	9.4	0.68	9.0	3.2	2.4	1	1	1	2	2	2	0	EAP30/Vps36	family
DUF3086	PF11285.3	gi|289596900|ref|YP_003483596.1|	-	1.2	7.9	6.3	1.9	7.2	4.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3086)
Rootletin	PF15035.1	gi|289596900|ref|YP_003483596.1|	-	1.3	8.9	10.2	2.3	8.1	7.1	1.3	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
Fmp27_WPPW	PF10359.4	gi|289596900|ref|YP_003483596.1|	-	1.7	6.9	17.5	0.34	9.2	8.2	2.2	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
CENP-Q	PF13094.1	gi|289596900|ref|YP_003483596.1|	-	2	8.4	13.3	12	5.8	9.2	2.2	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Nsp1_C	PF05064.8	gi|289596900|ref|YP_003483596.1|	-	2	8.0	16.6	1.5	8.4	1.3	2.4	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
DUF489	PF04356.7	gi|289596900|ref|YP_003483596.1|	-	2.2	7.8	8.1	4	6.9	5.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF489)
LXG	PF04740.7	gi|289596900|ref|YP_003483596.1|	-	2.3	7.9	23.8	4.3	7.0	7.0	2.3	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
YlqD	PF11068.3	gi|289596900|ref|YP_003483596.1|	-	2.5	8.1	13.6	6	6.9	0.8	2.3	1	1	1	2	2	2	0	YlqD	protein
TMPIT	PF07851.8	gi|289596900|ref|YP_003483596.1|	-	2.6	7.0	9.9	2.5	7.1	4.4	2.0	1	1	1	2	2	2	0	TMPIT-like	protein
DUF724	PF05266.9	gi|289596900|ref|YP_003483596.1|	-	3.7	7.1	10.1	12	5.4	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF724)
DUF2203	PF09969.4	gi|289596900|ref|YP_003483596.1|	-	3.8	7.7	7.2	22	5.2	0.2	2.7	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
DivIC	PF04977.10	gi|289596900|ref|YP_003483596.1|	-	4.5	6.8	20.8	1.9	8.0	0.1	4.1	1	1	3	4	4	4	0	Septum	formation	initiator
HAUS-augmin3	PF14932.1	gi|289596900|ref|YP_003483596.1|	-	5.5	6.1	18.1	1.5	7.9	6.2	2.2	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
Nup54	PF13874.1	gi|289596900|ref|YP_003483596.1|	-	5.6	6.6	12.2	3	7.5	1.0	2.5	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
Fzo_mitofusin	PF04799.8	gi|289596900|ref|YP_003483596.1|	-	6.5	6.1	12.0	5.9	6.2	6.4	2.1	1	1	1	2	2	2	0	fzo-like	conserved	region
Macoilin	PF09726.4	gi|289596900|ref|YP_003483596.1|	-	7.9	4.6	15.6	1.5	7.0	0.8	2.1	1	1	1	2	2	2	0	Transmembrane	protein
Syntaxin-6_N	PF09177.6	gi|289596900|ref|YP_003483596.1|	-	8	6.9	15.4	40	4.7	7.0	2.9	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
AAA_18	PF13238.1	gi|289596901|ref|YP_003483597.1|	-	1.2e-23	83.7	2.4	1.2e-23	83.7	1.7	1.4	2	0	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|289596901|ref|YP_003483597.1|	-	1.7e-12	48.2	2.2	1.9e-12	48.0	1.1	1.6	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|289596901|ref|YP_003483597.1|	-	0.00013	21.8	0.1	0.069	13.0	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|289596901|ref|YP_003483597.1|	-	0.00014	21.8	0.4	0.00055	19.9	0.0	2.1	1	1	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|289596901|ref|YP_003483597.1|	-	0.0007	19.7	0.0	0.0015	18.7	0.0	1.6	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.9	gi|289596901|ref|YP_003483597.1|	-	0.0015	18.2	0.4	0.15	11.7	0.3	2.4	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ADK	PF00406.17	gi|289596901|ref|YP_003483597.1|	-	0.0025	17.7	0.3	0.49	10.2	0.1	2.2	2	0	0	2	2	2	1	Adenylate	kinase
CPT	PF07931.7	gi|289596901|ref|YP_003483597.1|	-	0.0025	17.4	0.1	1.4	8.4	0.0	2.2	1	1	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
CoaE	PF01121.15	gi|289596901|ref|YP_003483597.1|	-	0.003	16.9	0.5	0.23	10.8	0.1	2.3	1	1	1	2	2	2	1	Dephospho-CoA	kinase
AAA_19	PF13245.1	gi|289596901|ref|YP_003483597.1|	-	0.0032	17.1	0.3	0.0066	16.1	0.2	1.6	1	1	0	1	1	1	1	Part	of	AAA	domain
dNK	PF01712.14	gi|289596901|ref|YP_003483597.1|	-	0.0035	17.2	2.0	0.0052	16.6	1.2	1.6	1	1	0	1	1	1	1	Deoxynucleoside	kinase
STN1_2	PF09170.5	gi|289596901|ref|YP_003483597.1|	-	0.0039	16.9	2.0	0.0052	16.5	1.4	1.1	1	0	0	1	1	1	1	CST,	Suppressor	of	cdc	thirteen	homolog,	complex	subunit	STN1
KTI12	PF08433.5	gi|289596901|ref|YP_003483597.1|	-	0.0049	16.1	0.1	0.013	14.7	0.0	1.7	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
KaiC	PF06745.8	gi|289596901|ref|YP_003483597.1|	-	0.005	15.9	2.6	0.15	11.1	0.0	2.4	2	1	0	2	2	2	1	KaiC
AAA_22	PF13401.1	gi|289596901|ref|YP_003483597.1|	-	0.0054	16.8	0.0	0.011	15.8	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
YiiD_Cterm	PF09500.5	gi|289596901|ref|YP_003483597.1|	-	0.0057	16.2	0.0	0.0095	15.5	0.0	1.3	1	0	0	1	1	1	1	Putative	thioesterase	(yiiD_Cterm)
ABC_tran	PF00005.22	gi|289596901|ref|YP_003483597.1|	-	0.0088	16.3	0.0	0.014	15.6	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
AAA_14	PF13173.1	gi|289596901|ref|YP_003483597.1|	-	0.014	15.3	0.4	0.02	14.8	0.3	1.6	1	1	0	1	1	1	0	AAA	domain
SKI	PF01202.17	gi|289596901|ref|YP_003483597.1|	-	0.018	14.8	1.2	0.4	10.5	0.2	2.2	1	1	0	2	2	2	0	Shikimate	kinase
DUF2075	PF09848.4	gi|289596901|ref|YP_003483597.1|	-	0.047	12.6	0.1	0.2	10.6	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Mg_chelatase	PF01078.16	gi|289596901|ref|YP_003483597.1|	-	0.056	12.5	0.1	0.28	10.3	0.0	1.9	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.7	gi|289596901|ref|YP_003483597.1|	-	0.067	12.2	0.1	0.14	11.1	0.0	1.6	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Seryl_tRNA_N	PF02403.17	gi|289596901|ref|YP_003483597.1|	-	0.36	10.8	3.9	4.8	7.2	1.3	2.9	2	1	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
NTPase_1	PF03266.10	gi|289596901|ref|YP_003483597.1|	-	0.71	9.5	3.2	1.8	8.2	0.5	2.4	2	1	0	2	2	2	0	NTPase
TSC22	PF01166.13	gi|289596901|ref|YP_003483597.1|	-	0.93	9.4	3.6	2	8.4	0.2	2.3	2	0	0	2	2	2	0	TSC-22/dip/bun	family
CDP-OH_P_transf	PF01066.16	gi|289596902|ref|YP_003483598.1|	-	4.2e-15	55.8	14.9	4.3e-14	52.6	10.3	2.1	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
DNA_primase_lrg	PF04104.9	gi|289596903|ref|YP_003483599.1|	-	5.3e-38	130.7	0.1	7.8e-38	130.2	0.1	1.3	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
JmjN	PF02375.12	gi|289596903|ref|YP_003483599.1|	-	0.014	14.9	1.7	1.6	8.3	0.0	3.3	3	0	0	3	3	3	0	jmjN	domain
PYC_OADA	PF02436.13	gi|289596904|ref|YP_003483600.1|	-	9.9e-63	211.1	0.3	1.9e-62	210.2	0.2	1.4	1	0	0	1	1	1	1	Conserved	carboxylase	domain
HMGL-like	PF00682.14	gi|289596904|ref|YP_003483600.1|	-	2e-44	152.0	0.0	3e-44	151.4	0.0	1.3	1	0	0	1	1	1	1	HMGL-like
TGT	PF01702.13	gi|289596904|ref|YP_003483600.1|	-	0.0036	16.6	0.3	0.018	14.3	0.1	2.0	1	1	0	2	2	2	1	Queuine	tRNA-ribosyltransferase
DUF561	PF04481.7	gi|289596904|ref|YP_003483600.1|	-	0.016	14.1	0.1	0.22	10.4	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF561)
DUF3787	PF12655.2	gi|289596904|ref|YP_003483600.1|	-	0.097	12.4	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3787)
DUF1614	PF07758.6	gi|289596905|ref|YP_003483601.1|	-	8.4e-56	188.4	13.1	1e-55	188.1	9.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
PmbA_TldD	PF01523.11	gi|289596906|ref|YP_003483602.1|	-	7.2e-47	160.0	1.8	8.8e-47	159.7	1.3	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|289596907|ref|YP_003483603.1|	-	1.6e-62	211.4	1.0	2e-62	211.1	0.7	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Spore_coat_CotO	PF14153.1	gi|289596907|ref|YP_003483603.1|	-	0.0049	16.3	0.3	0.008	15.6	0.2	1.2	1	0	0	1	1	1	1	Spore	coat	protein	CotO
CBS	PF00571.23	gi|289596908|ref|YP_003483604.1|	-	3.4e-56	186.7	13.8	5.8e-15	54.7	0.2	4.3	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|289596908|ref|YP_003483604.1|	-	3.4e-05	24.2	1.3	5.1e-05	23.6	0.1	1.9	2	0	0	2	2	2	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Tubulin	PF00091.20	gi|289596909|ref|YP_003483605.1|	-	3.4e-33	115.2	3.1	3.1e-32	112.1	2.1	2.1	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.3	gi|289596909|ref|YP_003483605.1|	-	3.1e-21	75.2	0.0	7.8e-21	73.9	0.0	1.7	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
Fe-ADH_2	PF13685.1	gi|289596909|ref|YP_003483605.1|	-	0.009	15.3	0.2	0.021	14.1	0.1	1.6	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Ribosomal_L7Ae	PF01248.21	gi|289596910|ref|YP_003483606.1|	-	1.9e-25	88.1	0.1	2.4e-25	87.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.6	gi|289596910|ref|YP_003483606.1|	-	0.0016	18.3	0.0	0.0019	18.0	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
NDUF_B5	PF09781.4	gi|289596910|ref|YP_003483606.1|	-	0.081	12.1	0.0	0.12	11.6	0.0	1.2	1	0	0	1	1	1	0	NADH:ubiquinone	oxidoreductase,	NDUFB5/SGDH	subunit
Ribosomal_S28e	PF01200.13	gi|289596911|ref|YP_003483607.1|	-	1.7e-32	110.9	4.6	1.8e-32	110.8	3.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|289596911|ref|YP_003483607.1|	-	0.027	14.1	1.9	0.37	10.5	0.1	2.6	1	1	1	2	2	2	0	KOW	motif
Ribosomal_L24e	PF01246.15	gi|289596912|ref|YP_003483608.1|	-	1.6e-22	79.1	0.7	1.8e-22	78.9	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|289596912|ref|YP_003483608.1|	-	1.5e-06	27.7	2.7	1.9e-06	27.3	1.8	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
YHS	PF04945.8	gi|289596912|ref|YP_003483608.1|	-	4.7e-05	23.1	1.8	6.7e-05	22.6	1.3	1.2	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|289596912|ref|YP_003483608.1|	-	0.0029	17.7	2.7	0.0058	16.7	1.9	1.5	1	1	0	1	1	1	1	Archaeal	TRASH	domain
DUF581	PF04570.9	gi|289596912|ref|YP_003483608.1|	-	0.006	15.8	0.8	0.011	15.0	0.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
DUF2175	PF09943.4	gi|289596912|ref|YP_003483608.1|	-	0.098	12.7	1.3	0.12	12.4	0.9	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
DUF2116	PF09889.4	gi|289596912|ref|YP_003483608.1|	-	0.1	12.3	0.8	9.6	6.0	0.1	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Zn_ribbon_recom	PF13408.1	gi|289596912|ref|YP_003483608.1|	-	0.49	10.6	4.5	0.61	10.3	2.9	1.4	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-HIT	PF04438.11	gi|289596912|ref|YP_003483608.1|	-	1.8	8.2	9.3	1.1e+02	2.5	6.4	2.2	1	1	0	1	1	1	0	HIT	zinc	finger
NDK	PF00334.14	gi|289596913|ref|YP_003483609.1|	-	9.4e-61	203.5	0.0	1.1e-60	203.3	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
TruD	PF01142.13	gi|289596914|ref|YP_003483610.1|	-	1.4e-90	303.6	0.0	1.6e-90	303.5	0.0	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
ECF-ribofla_trS	PF07155.7	gi|289596915|ref|YP_003483611.1|	-	3.5e-15	56.1	14.4	3.5e-15	56.1	10.0	1.5	2	0	0	2	2	2	1	ECF-type	riboflavin	transporter,	S	component
DUF3816	PF12822.2	gi|289596915|ref|YP_003483611.1|	-	2.4e-09	37.3	19.2	2.4e-09	37.3	13.3	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3816)
DUF3188	PF11384.3	gi|289596915|ref|YP_003483611.1|	-	0.36	10.4	3.6	0.18	11.3	0.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3188)
IncA	PF04156.9	gi|289596915|ref|YP_003483611.1|	-	1	8.9	5.8	1.9	8.0	4.0	1.4	1	0	0	1	1	1	0	IncA	protein
ABC_tran	PF00005.22	gi|289596916|ref|YP_003483612.1|	-	3.4e-60	202.2	0.1	7.2e-29	100.8	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|289596916|ref|YP_003483612.1|	-	1.2e-20	74.6	11.9	2.4e-08	34.2	2.1	4.3	2	2	1	3	3	3	3	AAA	domain
SMC_N	PF02463.14	gi|289596916|ref|YP_003483612.1|	-	3e-18	65.8	1.0	9.5e-09	34.8	0.0	3.3	2	1	1	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|289596916|ref|YP_003483612.1|	-	2.1e-10	40.8	0.8	0.0014	18.7	0.1	3.2	2	1	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|289596916|ref|YP_003483612.1|	-	5.6e-10	39.8	4.9	0.00017	21.9	0.5	2.6	1	1	1	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|289596916|ref|YP_003483612.1|	-	6.7e-09	36.6	0.9	0.0023	18.7	0.0	3.5	4	0	0	4	4	3	2	AAA	domain
AAA_15	PF13175.1	gi|289596916|ref|YP_003483612.1|	-	9.9e-09	34.7	9.9	0.25	10.3	0.0	4.2	2	2	2	4	4	4	4	AAA	ATPase	domain
AAA_16	PF13191.1	gi|289596916|ref|YP_003483612.1|	-	5.3e-08	33.0	0.1	0.0027	17.7	0.0	3.0	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596916|ref|YP_003483612.1|	-	7.3e-08	31.8	0.1	0.00067	19.1	0.0	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|289596916|ref|YP_003483612.1|	-	1.9e-07	30.9	0.2	0.0039	17.0	0.1	3.6	2	2	0	2	2	2	2	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|289596916|ref|YP_003483612.1|	-	4.8e-07	29.5	0.7	0.014	15.0	0.0	2.7	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|289596916|ref|YP_003483612.1|	-	1e-06	28.5	0.2	0.017	14.7	0.0	2.3	2	0	0	2	2	2	2	NACHT	domain
NB-ARC	PF00931.17	gi|289596916|ref|YP_003483612.1|	-	1.2e-06	27.6	0.1	0.0045	15.8	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
AAA_18	PF13238.1	gi|289596916|ref|YP_003483612.1|	-	2e-06	28.1	1.3	0.032	14.5	0.1	2.8	2	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|289596916|ref|YP_003483612.1|	-	2.6e-06	26.7	0.2	0.06	12.5	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|289596916|ref|YP_003483612.1|	-	2.8e-06	26.4	0.1	0.023	13.6	0.0	2.7	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
AAA_25	PF13481.1	gi|289596916|ref|YP_003483612.1|	-	1e-05	25.0	0.1	0.021	14.2	0.0	2.7	3	0	0	3	3	2	2	AAA	domain
AAA_33	PF13671.1	gi|289596916|ref|YP_003483612.1|	-	1.3e-05	25.0	1.0	0.0068	16.2	0.1	2.6	3	0	0	3	3	2	1	AAA	domain
UPF0079	PF02367.12	gi|289596916|ref|YP_003483612.1|	-	2.8e-05	23.7	0.4	0.15	11.7	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_10	PF12846.2	gi|289596916|ref|YP_003483612.1|	-	3.1e-05	23.5	2.8	0.096	12.0	0.1	3.3	3	0	0	3	3	3	1	AAA-like	domain
Mg_chelatase	PF01078.16	gi|289596916|ref|YP_003483612.1|	-	3.3e-05	23.1	0.0	0.18	10.9	0.0	2.6	3	0	0	3	3	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|289596916|ref|YP_003483612.1|	-	4.7e-05	23.0	0.3	0.31	10.8	0.0	2.5	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_30	PF13604.1	gi|289596916|ref|YP_003483612.1|	-	6.4e-05	22.6	0.0	0.046	13.3	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|289596916|ref|YP_003483612.1|	-	0.0001	22.4	1.5	0.33	11.1	0.0	3.1	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|289596916|ref|YP_003483612.1|	-	0.00011	21.9	1.2	0.047	13.3	0.1	2.8	2	1	0	2	2	2	1	Archaeal	ATPase
Miro	PF08477.8	gi|289596916|ref|YP_003483612.1|	-	0.00035	21.0	0.1	1.4	9.4	0.0	2.6	2	0	0	2	2	2	2	Miro-like	protein
FtsK_SpoIIIE	PF01580.13	gi|289596916|ref|YP_003483612.1|	-	0.00045	19.7	0.1	0.019	14.4	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Zeta_toxin	PF06414.7	gi|289596916|ref|YP_003483612.1|	-	0.00075	18.6	0.0	0.52	9.3	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
PduV-EutP	PF10662.4	gi|289596916|ref|YP_003483612.1|	-	0.00091	18.7	0.1	1.2	8.6	0.0	2.5	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_24	PF13479.1	gi|289596916|ref|YP_003483612.1|	-	0.0012	18.5	0.4	0.35	10.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.4	gi|289596916|ref|YP_003483612.1|	-	0.0015	17.1	0.4	4.5	5.7	0.0	3.4	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
DEAD	PF00270.24	gi|289596916|ref|YP_003483612.1|	-	0.0017	17.8	0.0	1.2	8.5	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
RNA_helicase	PF00910.17	gi|289596916|ref|YP_003483612.1|	-	0.0024	17.9	0.1	3	8.0	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
ATP_bind_1	PF03029.12	gi|289596916|ref|YP_003483612.1|	-	0.0036	16.8	0.4	0.17	11.4	0.0	2.4	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
IstB_IS21	PF01695.12	gi|289596916|ref|YP_003483612.1|	-	0.0036	16.7	0.2	2.1	7.7	0.0	3.4	4	0	0	4	4	3	1	IstB-like	ATP	binding	protein
Pox_A32	PF04665.7	gi|289596916|ref|YP_003483612.1|	-	0.0036	16.6	0.1	0.27	10.4	0.0	2.4	2	0	0	2	2	2	1	Poxvirus	A32	protein
PRK	PF00485.13	gi|289596916|ref|YP_003483612.1|	-	0.0045	16.5	0.1	1.8	8.0	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_5	PF07728.9	gi|289596916|ref|YP_003483612.1|	-	0.005	16.5	1.4	0.65	9.7	0.0	3.1	3	0	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|289596916|ref|YP_003483612.1|	-	0.006	16.4	2.5	4	7.3	0.0	3.6	3	1	0	3	3	2	0	AAA	domain
AAA_13	PF13166.1	gi|289596916|ref|YP_003483612.1|	-	0.0088	14.5	7.1	0.055	11.9	0.0	3.4	2	2	1	4	4	4	1	AAA	domain
PhoH	PF02562.11	gi|289596916|ref|YP_003483612.1|	-	0.0099	15.1	0.1	3.1	6.9	0.0	2.3	2	0	0	2	2	2	0	PhoH-like	protein
NTPase_1	PF03266.10	gi|289596916|ref|YP_003483612.1|	-	0.011	15.5	1.5	3.3	7.4	0.2	2.5	2	0	0	2	2	2	0	NTPase
KaiC	PF06745.8	gi|289596916|ref|YP_003483612.1|	-	0.011	14.9	0.2	1.4	8.0	0.0	2.4	2	0	0	2	2	2	0	KaiC
SRP54	PF00448.17	gi|289596916|ref|YP_003483612.1|	-	0.013	14.9	1.7	3.3	7.0	0.1	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
cobW	PF02492.14	gi|289596916|ref|YP_003483612.1|	-	0.019	14.4	2.6	1.3	8.4	0.1	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
G-alpha	PF00503.15	gi|289596916|ref|YP_003483612.1|	-	0.026	13.2	0.1	0.28	9.8	0.0	2.2	2	1	0	2	2	2	0	G-protein	alpha	subunit
Septin	PF00735.13	gi|289596916|ref|YP_003483612.1|	-	0.034	13.1	0.2	1	8.3	0.0	2.2	2	0	0	2	2	2	0	Septin
Sigma54_activat	PF00158.21	gi|289596916|ref|YP_003483612.1|	-	0.043	13.2	0.1	4.4	6.7	0.0	2.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DUF87	PF01935.12	gi|289596916|ref|YP_003483612.1|	-	0.044	13.5	3.6	2.6	7.8	0.0	3.3	4	0	0	4	4	3	0	Domain	of	unknown	function	DUF87
MMR_HSR1	PF01926.18	gi|289596916|ref|YP_003483612.1|	-	0.07	13.0	2.9	5	7.1	0.3	2.7	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF3584	PF12128.3	gi|289596916|ref|YP_003483612.1|	-	0.1	9.9	1.7	3.8	4.7	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3584)
MutS_V	PF00488.16	gi|289596916|ref|YP_003483612.1|	-	0.14	11.5	0.1	0.84	8.9	0.0	2.2	3	0	0	3	3	3	0	MutS	domain	V
Dynamin_N	PF00350.18	gi|289596916|ref|YP_003483612.1|	-	0.14	11.9	1.9	7.5	6.3	0.2	2.8	3	1	0	3	3	2	0	Dynamin	family
AAA_28	PF13521.1	gi|289596916|ref|YP_003483612.1|	-	0.31	10.9	1.8	7.6	6.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
CbiQ	PF02361.11	gi|289596917|ref|YP_003483613.1|	-	6e-19	68.4	21.0	6e-19	68.4	14.6	2.4	1	1	1	2	2	2	1	Cobalt	transport	protein
DUF4430	PF14478.1	gi|289596918|ref|YP_003483614.1|	-	8.9e-15	54.5	3.0	1.3e-14	53.9	0.3	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4430)
DNA_primase_S	PF01896.14	gi|289596919|ref|YP_003483615.1|	-	2.8e-18	66.1	0.2	5.4e-18	65.1	0.1	1.4	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
Rb_C	PF08934.5	gi|289596919|ref|YP_003483615.1|	-	0.11	12.1	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	Rb	C-terminal	domain
Ribosomal_S17e	PF00833.13	gi|289596920|ref|YP_003483616.1|	-	5.1e-18	64.9	0.1	5.7e-18	64.8	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	S17
TYW3	PF02676.9	gi|289596921|ref|YP_003483617.1|	-	1e-49	168.4	1.8	1.2e-49	168.2	1.2	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
Ribosomal_S15	PF00312.17	gi|289596921|ref|YP_003483617.1|	-	0.059	13.1	0.1	0.29	10.9	0.0	2.2	3	0	0	3	3	3	0	Ribosomal	protein	S15
tRNA_anti-codon	PF01336.20	gi|289596922|ref|YP_003483618.1|	-	5.6e-10	38.9	0.3	1.1e-09	37.9	0.2	1.6	1	1	1	2	2	2	1	OB-fold	nucleic	acid	binding	domain
DUF1975	PF09318.5	gi|289596922|ref|YP_003483618.1|	-	0.043	13.4	0.1	0.049	13.2	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1975)
DUF3979	PF13141.1	gi|289596922|ref|YP_003483618.1|	-	0.1	12.4	0.7	0.16	11.8	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3979)
Methyltransf_31	PF13847.1	gi|289596923|ref|YP_003483619.1|	-	1.1e-13	51.0	0.0	2.1e-13	50.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289596923|ref|YP_003483619.1|	-	9e-11	42.3	0.0	2.1e-10	41.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|289596923|ref|YP_003483619.1|	-	2.2e-10	40.3	0.0	4.4e-10	39.3	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.9	gi|289596923|ref|YP_003483619.1|	-	4.7e-09	35.8	0.0	8.2e-09	35.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.1	gi|289596923|ref|YP_003483619.1|	-	8.9e-09	35.6	0.0	2.1e-08	34.4	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289596923|ref|YP_003483619.1|	-	2.2e-07	30.9	0.0	3.1e-07	30.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|289596923|ref|YP_003483619.1|	-	4.8e-06	26.9	0.0	9.7e-06	25.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.11	gi|289596923|ref|YP_003483619.1|	-	4e-05	22.7	0.0	8.8e-05	21.6	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
UPF0020	PF01170.13	gi|289596923|ref|YP_003483619.1|	-	4.5e-05	23.0	0.0	9e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_4	PF02390.12	gi|289596923|ref|YP_003483619.1|	-	0.00044	19.3	0.0	0.00097	18.2	0.0	1.6	2	0	0	2	2	2	1	Putative	methyltransferase
tRNA_U5-meth_tr	PF05958.6	gi|289596923|ref|YP_003483619.1|	-	0.0012	17.6	0.0	0.0023	16.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
PrmA	PF06325.8	gi|289596923|ref|YP_003483619.1|	-	0.0013	17.9	0.0	0.002	17.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.14	gi|289596923|ref|YP_003483619.1|	-	0.0025	17.3	0.0	0.0042	16.6	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Cons_hypoth95	PF03602.10	gi|289596923|ref|YP_003483619.1|	-	0.0027	17.1	0.0	0.0052	16.1	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
GidB	PF02527.10	gi|289596923|ref|YP_003483619.1|	-	0.0038	16.3	0.0	0.0083	15.2	0.0	1.5	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_12	PF08242.7	gi|289596923|ref|YP_003483619.1|	-	0.0044	17.4	0.2	0.011	16.1	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|289596923|ref|YP_003483619.1|	-	0.0063	15.6	0.1	0.011	14.8	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Ubie_methyltran	PF01209.13	gi|289596923|ref|YP_003483619.1|	-	0.012	14.7	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_32	PF13679.1	gi|289596923|ref|YP_003483619.1|	-	0.023	14.4	0.0	0.042	13.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
DUF2507	PF10702.4	gi|289596923|ref|YP_003483619.1|	-	0.05	13.2	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2507)
CmcI	PF04989.7	gi|289596923|ref|YP_003483619.1|	-	0.054	12.7	0.0	0.12	11.6	0.0	1.5	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
FmrO	PF07091.6	gi|289596923|ref|YP_003483619.1|	-	0.06	12.3	0.0	0.1	11.5	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
UDPG_MGDP_dh_N	PF03721.9	gi|289596923|ref|YP_003483619.1|	-	0.11	11.8	0.0	0.21	10.9	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Methyltransf_24	PF13578.1	gi|289596923|ref|YP_003483619.1|	-	0.13	13.1	0.0	0.33	11.7	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Mtp	PF03821.11	gi|289596924|ref|YP_003483620.1|	-	0.0034	16.8	1.2	0.0036	16.7	0.8	1.2	1	0	0	1	1	1	1	Golgi	4-transmembrane	spanning	transporter
Tetraspannin	PF00335.15	gi|289596924|ref|YP_003483620.1|	-	0.026	13.8	1.7	0.025	13.8	1.2	1.1	1	0	0	1	1	1	0	Tetraspanin	family
YcxB	PF14317.1	gi|289596924|ref|YP_003483620.1|	-	0.11	11.7	2.2	0.24	10.6	0.4	2.4	1	1	1	2	2	2	0	YcxB-like	protein
DUF4131	PF13567.1	gi|289596924|ref|YP_003483620.1|	-	0.11	11.8	0.5	0.12	11.7	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
ABC_tran	PF00005.22	gi|289596925|ref|YP_003483621.1|	-	3.9e-30	104.9	0.0	1.1e-29	103.4	0.0	1.7	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596925|ref|YP_003483621.1|	-	3.6e-20	72.0	0.3	7.7e-20	71.0	0.2	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289596925|ref|YP_003483621.1|	-	9.4e-13	48.7	2.3	5.6e-11	42.9	1.6	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289596925|ref|YP_003483621.1|	-	7.5e-07	29.3	0.0	1.2e-06	28.6	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|289596925|ref|YP_003483621.1|	-	1.1e-05	24.7	0.2	5.8e-05	22.4	0.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|289596925|ref|YP_003483621.1|	-	4.7e-05	22.6	1.7	0.0087	15.1	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289596925|ref|YP_003483621.1|	-	0.0003	20.9	0.7	0.0084	16.2	0.5	2.2	1	1	0	1	1	1	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|289596925|ref|YP_003483621.1|	-	0.00095	18.7	0.0	0.0012	18.3	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|289596925|ref|YP_003483621.1|	-	0.0021	18.3	0.1	0.0088	16.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|289596925|ref|YP_003483621.1|	-	0.0044	17.2	0.1	0.23	11.6	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|289596925|ref|YP_003483621.1|	-	0.0096	14.8	0.1	0.04	12.7	0.0	1.9	2	0	0	2	2	2	1	NB-ARC	domain
NACHT	PF05729.7	gi|289596925|ref|YP_003483621.1|	-	0.012	15.3	0.2	0.028	14.0	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
Sigma54_activat	PF00158.21	gi|289596925|ref|YP_003483621.1|	-	0.013	14.9	0.0	0.77	9.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|289596925|ref|YP_003483621.1|	-	0.016	14.8	0.6	0.03	14.0	0.1	1.7	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_17	PF13207.1	gi|289596925|ref|YP_003483621.1|	-	0.026	15.3	0.1	0.042	14.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|289596925|ref|YP_003483621.1|	-	0.027	13.6	0.0	0.26	10.3	0.0	2.1	2	0	0	2	2	2	0	KaiC
SbcCD_C	PF13558.1	gi|289596925|ref|YP_003483621.1|	-	0.031	14.1	0.0	0.098	12.5	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
PRK	PF00485.13	gi|289596925|ref|YP_003483621.1|	-	0.035	13.6	0.1	0.086	12.3	0.0	1.7	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
MobB	PF03205.9	gi|289596925|ref|YP_003483621.1|	-	0.035	13.8	0.3	0.069	12.8	0.1	1.5	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_5	PF07728.9	gi|289596925|ref|YP_003483621.1|	-	0.042	13.5	0.0	0.25	11.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|289596925|ref|YP_003483621.1|	-	0.084	12.0	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|289596925|ref|YP_003483621.1|	-	0.1	11.4	0.1	0.18	10.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|289596925|ref|YP_003483621.1|	-	0.12	11.9	0.1	0.23	11.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|289596925|ref|YP_003483621.1|	-	0.14	11.5	0.0	2.3	7.5	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA_13	PF13166.1	gi|289596925|ref|YP_003483621.1|	-	0.85	8.0	5.9	2.3	6.5	0.0	3.0	2	1	0	3	3	3	0	AAA	domain
ABC_tran	PF00005.22	gi|289596926|ref|YP_003483622.1|	-	1.3e-28	100.0	0.0	1.7e-28	99.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289596926|ref|YP_003483622.1|	-	1e-20	73.8	0.2	2.4e-20	72.6	0.1	1.7	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289596926|ref|YP_003483622.1|	-	1.7e-09	38.0	0.6	4.3e-09	36.7	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|289596926|ref|YP_003483622.1|	-	0.0028	16.9	0.7	0.011	15.0	0.5	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|289596926|ref|YP_003483622.1|	-	0.0079	15.2	0.1	0.0079	15.2	0.1	2.2	2	1	0	3	3	3	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|289596926|ref|YP_003483622.1|	-	0.0096	15.3	0.4	1	8.7	0.0	2.3	2	1	0	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|289596926|ref|YP_003483622.1|	-	0.019	14.3	0.1	0.46	9.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Zot	PF05707.7	gi|289596926|ref|YP_003483622.1|	-	0.024	14.1	0.1	1.4	8.3	0.1	2.2	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_22	PF13401.1	gi|289596926|ref|YP_003483622.1|	-	0.095	12.8	2.3	8.6	6.5	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.4	gi|289596926|ref|YP_003483622.1|	-	0.32	9.5	1.6	1.1	7.7	0.9	2.0	1	1	1	2	2	2	0	Predicted	ATPase	of	the	ABC	class
BPD_transp_1	PF00528.17	gi|289596927|ref|YP_003483623.1|	-	1e-36	126.1	11.4	1e-36	126.1	7.9	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|289596927|ref|YP_003483623.1|	-	7.5e-10	38.0	0.2	7.5e-10	38.0	0.2	3.5	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|289596928|ref|YP_003483624.1|	-	7.1e-44	149.5	15.1	7.1e-44	149.5	10.4	1.6	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.17	gi|289596929|ref|YP_003483625.1|	-	4.2e-90	302.2	6.7	5.6e-90	301.8	4.6	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF1510	PF07423.6	gi|289596929|ref|YP_003483625.1|	-	1.9	7.8	5.4	28	3.9	2.5	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1510)
Ribosomal_L18ae	PF01775.12	gi|289596931|ref|YP_003483627.1|	-	3.8e-05	23.5	0.2	5e-05	23.1	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
Prefoldin	PF02996.12	gi|289596932|ref|YP_003483628.1|	-	1.9e-17	62.9	8.1	2.6e-17	62.5	5.6	1.2	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.15	gi|289596932|ref|YP_003483628.1|	-	0.00098	18.8	12.6	0.002	17.8	0.4	2.5	2	1	0	2	2	2	1	Prefoldin	subunit
Bacillus_HBL	PF05791.6	gi|289596932|ref|YP_003483628.1|	-	0.013	14.8	7.8	0.49	9.7	0.4	2.2	2	0	0	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
Baculo_PEP_C	PF04513.7	gi|289596932|ref|YP_003483628.1|	-	0.024	14.4	3.2	0.6	9.9	0.3	2.1	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF4407	PF14362.1	gi|289596932|ref|YP_003483628.1|	-	0.024	13.6	4.4	0.86	8.5	0.5	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
FlxA	PF14282.1	gi|289596932|ref|YP_003483628.1|	-	0.03	14.2	1.8	0.03	14.2	1.3	2.2	2	0	0	2	2	2	0	FlxA-like	protein
DUF2121	PF09894.4	gi|289596932|ref|YP_003483628.1|	-	0.056	12.7	2.6	0.079	12.2	1.8	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2121)
COG5	PF10392.4	gi|289596932|ref|YP_003483628.1|	-	0.06	13.2	5.1	1.4	8.8	0.8	2.1	2	0	0	2	2	2	0	Golgi	transport	complex	subunit	5
Cep57_CLD_2	PF14197.1	gi|289596932|ref|YP_003483628.1|	-	0.065	13.1	5.5	0.31	10.9	0.2	2.4	2	0	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
Phage_GP20	PF06810.6	gi|289596932|ref|YP_003483628.1|	-	0.078	12.4	15.2	0.32	10.4	1.5	2.1	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
NPV_P10	PF05531.7	gi|289596932|ref|YP_003483628.1|	-	0.089	13.0	5.9	0.42	10.8	0.4	2.5	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Lectin_N	PF03954.9	gi|289596932|ref|YP_003483628.1|	-	0.099	12.0	2.4	0.69	9.3	1.7	2.0	1	1	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
FliD_C	PF07195.7	gi|289596932|ref|YP_003483628.1|	-	0.15	11.2	5.3	2.2	7.5	0.4	2.1	2	0	0	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Rab5-bind	PF09311.6	gi|289596932|ref|YP_003483628.1|	-	0.15	11.8	10.1	0.6	9.9	1.6	2.1	2	0	0	2	2	2	0	Rabaptin-like	protein
Occludin_ELL	PF07303.8	gi|289596932|ref|YP_003483628.1|	-	0.2	12.4	8.4	1.7	9.4	0.3	2.1	2	0	0	2	2	2	0	Occludin	homology	domain
Phasin	PF05597.6	gi|289596932|ref|YP_003483628.1|	-	0.23	11.2	6.4	0.77	9.5	0.5	2.2	2	0	0	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF4201	PF13870.1	gi|289596932|ref|YP_003483628.1|	-	0.24	10.8	11.3	0.53	9.6	3.2	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
DUF4618	PF15397.1	gi|289596932|ref|YP_003483628.1|	-	0.26	10.6	7.6	2.2	7.5	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
Uds1	PF15456.1	gi|289596932|ref|YP_003483628.1|	-	0.29	11.1	3.8	0.91	9.5	2.1	2.1	1	1	1	2	2	2	0	Up-regulated	During	Septation
HsbA	PF12296.3	gi|289596932|ref|YP_003483628.1|	-	0.29	11.0	2.9	3.3	7.5	0.1	2.1	2	0	0	2	2	2	0	Hydrophobic	surface	binding	protein	A
DUF3573	PF12097.3	gi|289596932|ref|YP_003483628.1|	-	0.32	9.5	5.3	0.16	10.5	0.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3573)
DUF87	PF01935.12	gi|289596932|ref|YP_003483628.1|	-	0.32	10.7	5.3	1.4	8.7	3.6	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
TBPIP	PF07106.8	gi|289596932|ref|YP_003483628.1|	-	0.34	10.4	12.0	1.1	8.8	0.7	2.2	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
ADIP	PF11559.3	gi|289596932|ref|YP_003483628.1|	-	0.42	10.5	10.6	0.72	9.7	1.4	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Fib_alpha	PF08702.5	gi|289596932|ref|YP_003483628.1|	-	0.44	10.6	5.8	1.8	8.6	0.4	2.2	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Spc24	PF08286.6	gi|289596932|ref|YP_003483628.1|	-	0.47	10.1	7.8	0.58	9.8	0.3	2.2	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Spc7	PF08317.6	gi|289596932|ref|YP_003483628.1|	-	0.52	8.9	13.0	0.22	10.1	1.8	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DUF4200	PF13863.1	gi|289596932|ref|YP_003483628.1|	-	0.66	9.9	13.7	0.47	10.4	0.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
YgaB	PF14182.1	gi|289596932|ref|YP_003483628.1|	-	0.72	10.1	9.4	4.2	7.6	0.8	2.6	2	1	0	2	2	2	0	YgaB-like	protein
FlaC_arch	PF05377.6	gi|289596932|ref|YP_003483628.1|	-	0.8	9.6	6.2	0.68	9.8	0.4	2.6	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF4140	PF13600.1	gi|289596932|ref|YP_003483628.1|	-	0.88	10.0	5.1	2.4	8.6	0.4	2.3	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
IncA	PF04156.9	gi|289596932|ref|YP_003483628.1|	-	0.88	9.1	11.4	1.5	8.3	1.3	2.1	2	0	0	2	2	2	0	IncA	protein
Snapin_Pallidin	PF14712.1	gi|289596932|ref|YP_003483628.1|	-	0.91	9.8	8.8	6.8	7.0	1.8	2.2	2	0	0	2	2	2	0	Snapin/Pallidin
dNK	PF01712.14	gi|289596932|ref|YP_003483628.1|	-	1.2	8.9	6.3	2.7	7.8	4.4	1.7	1	1	0	1	1	1	0	Deoxynucleoside	kinase
Atg14	PF10186.4	gi|289596932|ref|YP_003483628.1|	-	1.3	7.9	8.8	2.4	7.0	0.4	2.0	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DivIC	PF04977.10	gi|289596932|ref|YP_003483628.1|	-	1.5	8.3	13.4	0.085	12.3	0.6	2.7	2	1	0	2	2	2	0	Septum	formation	initiator
Spectrin	PF00435.16	gi|289596932|ref|YP_003483628.1|	-	1.6	9.0	7.7	6.2	7.1	0.8	2.3	2	0	0	2	2	2	0	Spectrin	repeat
TMF_DNA_bd	PF12329.3	gi|289596932|ref|YP_003483628.1|	-	1.6	8.5	16.4	2.3	8.0	1.8	2.4	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
ATG16	PF08614.6	gi|289596932|ref|YP_003483628.1|	-	1.6	8.4	9.4	0.61	9.8	1.2	2.2	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
Phage_lysis	PF03245.8	gi|289596932|ref|YP_003483628.1|	-	1.7	8.6	6.3	2.2	8.3	0.6	2.3	2	0	0	2	2	2	0	Bacteriophage	Rz	lysis	protein
Laminin_II	PF06009.7	gi|289596932|ref|YP_003483628.1|	-	1.7	8.4	7.5	7.6	6.2	0.5	2.4	3	0	0	3	3	2	0	Laminin	Domain	II
Ax_dynein_light	PF10211.4	gi|289596932|ref|YP_003483628.1|	-	1.9	8.2	10.0	5	6.9	1.3	2.2	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
Rootletin	PF15035.1	gi|289596932|ref|YP_003483628.1|	-	2	8.3	9.9	6.3	6.7	1.3	2.2	2	0	0	2	2	2	0	Ciliary	rootlet	component,	centrosome	cohesion
Macoilin	PF09726.4	gi|289596932|ref|YP_003483628.1|	-	2.1	6.5	9.3	25	2.9	6.0	1.9	1	1	0	1	1	1	0	Transmembrane	protein
SlyX	PF04102.7	gi|289596932|ref|YP_003483628.1|	-	2.1	8.7	8.6	0.98	9.8	0.9	2.4	2	1	0	2	2	2	0	SlyX
ParB	PF08775.5	gi|289596932|ref|YP_003483628.1|	-	2.5	8.4	8.3	10	6.4	0.8	2.2	1	1	0	2	2	2	0	ParB	family
EAP30	PF04157.11	gi|289596932|ref|YP_003483628.1|	-	2.6	7.1	6.8	0.53	9.3	0.4	2.0	1	1	1	2	2	2	0	EAP30/Vps36	family
Snf7	PF03357.16	gi|289596932|ref|YP_003483628.1|	-	2.6	7.3	11.0	3.5	6.9	0.9	2.2	2	0	0	2	2	2	0	Snf7
Mnd1	PF03962.10	gi|289596932|ref|YP_003483628.1|	-	2.8	7.5	8.2	1.7	8.2	0.6	2.1	2	0	0	2	2	2	0	Mnd1	family
CENP-F_leu_zip	PF10473.4	gi|289596932|ref|YP_003483628.1|	-	3.1	7.6	15.2	0.53	10.1	2.3	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
BRE1	PF08647.6	gi|289596932|ref|YP_003483628.1|	-	3.7	7.5	13.2	0.45	10.5	3.5	2.2	2	0	0	2	2	2	0	BRE1	E3	ubiquitin	ligase
Viral_P18	PF04521.8	gi|289596932|ref|YP_003483628.1|	-	3.8	6.9	7.5	2.6	7.4	0.4	2.2	2	0	0	2	2	2	0	ssRNA	positive	strand	viral	18kD	cysteine	rich	protein
Tho2	PF11262.3	gi|289596932|ref|YP_003483628.1|	-	3.9	6.4	8.4	4	6.4	0.5	2.0	1	1	1	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
TPR_MLP1_2	PF07926.7	gi|289596932|ref|YP_003483628.1|	-	5.9	6.6	13.4	84	2.9	8.4	2.4	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
CENP-Q	PF13094.1	gi|289596932|ref|YP_003483628.1|	-	6.8	6.7	11.8	14	5.6	7.1	1.9	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
CDC37_N	PF03234.9	gi|289596932|ref|YP_003483628.1|	-	9	6.5	7.9	3.3	8.0	1.2	2.0	1	1	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
DUF3847	PF12958.2	gi|289596932|ref|YP_003483628.1|	-	9.2	6.0	9.3	12	5.7	0.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3847)
SRP54	PF00448.17	gi|289596933|ref|YP_003483629.1|	-	1.9e-77	259.1	1.1	3.4e-77	258.3	0.8	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|289596933|ref|YP_003483629.1|	-	1.4e-12	47.4	6.5	3.7e-12	46.1	4.4	1.8	1	1	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_30	PF13604.1	gi|289596933|ref|YP_003483629.1|	-	3.4e-08	33.3	0.2	5.9e-08	32.5	0.2	1.4	1	0	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|289596933|ref|YP_003483629.1|	-	2.1e-07	30.5	0.6	4e-07	29.6	0.4	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|289596933|ref|YP_003483629.1|	-	1e-06	28.5	1.8	3.8e-06	26.6	1.3	2.1	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|289596933|ref|YP_003483629.1|	-	1e-06	28.3	6.4	5.4e-06	25.9	2.5	2.6	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
APS_kinase	PF01583.15	gi|289596933|ref|YP_003483629.1|	-	5.6e-06	26.1	0.0	1.5e-05	24.7	0.0	1.7	1	0	0	1	1	1	1	Adenylylsulphate	kinase
Thymidylate_kin	PF02223.12	gi|289596933|ref|YP_003483629.1|	-	2.2e-05	23.8	0.5	0.00031	20.1	0.1	2.6	3	0	0	3	3	3	1	Thymidylate	kinase
AAA_22	PF13401.1	gi|289596933|ref|YP_003483629.1|	-	0.00012	22.1	0.1	0.00033	20.7	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|289596933|ref|YP_003483629.1|	-	0.00015	20.6	1.5	0.0009	18.0	0.9	2.3	1	1	0	1	1	1	1	ArgK	protein
DUF2075	PF09848.4	gi|289596933|ref|YP_003483629.1|	-	0.00019	20.5	0.1	0.00027	20.0	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.1	gi|289596933|ref|YP_003483629.1|	-	0.00025	20.9	0.0	0.00059	19.7	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA	PF00004.24	gi|289596933|ref|YP_003483629.1|	-	0.00031	20.9	0.3	0.00074	19.7	0.2	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|289596933|ref|YP_003483629.1|	-	0.00062	19.6	1.5	0.0014	18.5	0.1	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_19	PF13245.1	gi|289596933|ref|YP_003483629.1|	-	0.00065	19.3	0.1	0.0013	18.4	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_28	PF13521.1	gi|289596933|ref|YP_003483629.1|	-	0.0013	18.7	0.2	0.0031	17.5	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289596933|ref|YP_003483629.1|	-	0.0024	17.8	0.0	0.0056	16.6	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
KTI12	PF08433.5	gi|289596933|ref|YP_003483629.1|	-	0.0037	16.5	0.0	0.0083	15.3	0.0	1.5	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_17	PF13207.1	gi|289596933|ref|YP_003483629.1|	-	0.0046	17.7	0.5	0.0046	17.7	0.3	2.5	2	1	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|289596933|ref|YP_003483629.1|	-	0.0057	16.3	3.1	0.032	13.9	0.1	2.6	3	0	0	3	3	3	1	NTPase
LpxK	PF02606.9	gi|289596933|ref|YP_003483629.1|	-	0.006	15.5	0.1	0.013	14.4	0.1	1.5	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
6PF2K	PF01591.13	gi|289596933|ref|YP_003483629.1|	-	0.0087	15.1	0.0	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
DUF2855	PF11017.3	gi|289596933|ref|YP_003483629.1|	-	0.015	14.4	0.1	0.034	13.3	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2855)
Zeta_toxin	PF06414.7	gi|289596933|ref|YP_003483629.1|	-	0.018	14.1	0.2	0.054	12.5	0.2	1.8	1	1	0	1	1	1	0	Zeta	toxin
ABC_tran	PF00005.22	gi|289596933|ref|YP_003483629.1|	-	0.018	15.3	0.2	0.045	14.0	0.2	1.7	1	1	0	1	1	1	0	ABC	transporter
AAA_15	PF13175.1	gi|289596933|ref|YP_003483629.1|	-	0.02	13.9	0.0	0.046	12.7	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_5	PF07728.9	gi|289596933|ref|YP_003483629.1|	-	0.022	14.4	0.0	0.038	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
KaiC	PF06745.8	gi|289596933|ref|YP_003483629.1|	-	0.022	13.8	2.5	0.023	13.8	0.1	1.9	1	1	1	2	2	2	0	KaiC
DUF853	PF05872.7	gi|289596933|ref|YP_003483629.1|	-	0.022	13.1	0.5	0.49	8.6	0.0	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF853)
T2SE	PF00437.15	gi|289596933|ref|YP_003483629.1|	-	0.023	13.6	0.1	0.036	12.9	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
GTP_EFTU	PF00009.22	gi|289596933|ref|YP_003483629.1|	-	0.026	13.9	0.3	0.026	13.9	0.2	1.7	2	0	0	2	2	1	0	Elongation	factor	Tu	GTP	binding	domain
AAA_18	PF13238.1	gi|289596933|ref|YP_003483629.1|	-	0.036	14.3	1.7	0.093	13.0	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
B12-binding	PF02310.14	gi|289596933|ref|YP_003483629.1|	-	0.038	13.8	1.0	0.084	12.7	0.1	2.0	2	1	0	2	2	1	0	B12	binding	domain
PIF1	PF05970.9	gi|289596933|ref|YP_003483629.1|	-	0.038	12.9	0.0	0.057	12.3	0.0	1.4	1	0	0	1	1	1	0	PIF1-like	helicase
ATP_bind_1	PF03029.12	gi|289596933|ref|YP_003483629.1|	-	0.038	13.5	0.1	0.37	10.3	0.1	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
SRPRB	PF09439.5	gi|289596933|ref|YP_003483629.1|	-	0.039	13.1	2.7	2.7	7.1	0.0	3.0	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
Arf	PF00025.16	gi|289596933|ref|YP_003483629.1|	-	0.052	12.7	0.1	0.26	10.5	0.0	2.1	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
TrwB_AAD_bind	PF10412.4	gi|289596933|ref|YP_003483629.1|	-	0.07	11.7	0.0	0.12	10.9	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Arch_ATPase	PF01637.13	gi|289596933|ref|YP_003483629.1|	-	0.096	12.3	2.4	0.16	11.6	0.0	2.2	1	1	1	2	2	2	0	Archaeal	ATPase
DUF1021	PF06257.6	gi|289596933|ref|YP_003483629.1|	-	0.11	12.1	0.4	0.28	10.8	0.3	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1021)
DFP	PF04127.10	gi|289596933|ref|YP_003483629.1|	-	0.12	12.0	7.5	0.012	15.2	1.9	1.7	2	1	0	2	2	1	0	DNA	/	pantothenate	metabolism	flavoprotein
DUF258	PF03193.11	gi|289596933|ref|YP_003483629.1|	-	0.13	11.4	0.0	1.2	8.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
Glyco_transf_4	PF13439.1	gi|289596933|ref|YP_003483629.1|	-	0.13	11.9	0.0	0.43	10.2	0.0	1.6	1	1	1	2	2	2	0	Glycosyltransferase	Family	4
AAA_26	PF13500.1	gi|289596933|ref|YP_003483629.1|	-	0.14	11.7	0.8	6.1	6.3	0.1	2.6	2	1	0	2	2	2	0	AAA	domain
PPV_E1_C	PF00519.12	gi|289596933|ref|YP_003483629.1|	-	0.14	10.7	0.0	0.2	10.2	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
AAA_31	PF13614.1	gi|289596933|ref|YP_003483629.1|	-	0.14	12.0	0.0	2.3	8.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|289596933|ref|YP_003483629.1|	-	0.33	10.7	2.0	0.78	9.5	0.4	2.2	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
ArsA_ATPase	PF02374.10	gi|289596933|ref|YP_003483629.1|	-	0.54	9.2	3.9	0.36	9.8	0.2	2.3	3	0	0	3	3	3	0	Anion-transporting	ATPase
PTS_IIB	PF02302.12	gi|289596933|ref|YP_003483629.1|	-	3	8.4	6.6	1.9	9.0	0.2	3.1	2	1	0	2	2	2	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
AAA_23	PF13476.1	gi|289596933|ref|YP_003483629.1|	-	4.7	7.4	7.2	0.55	10.5	0.5	2.3	1	1	1	2	2	2	0	AAA	domain
PALP	PF00291.20	gi|289596934|ref|YP_003483630.1|	-	2.4e-51	174.7	0.0	2.7e-51	174.6	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
GHMP_kinases_C	PF08544.8	gi|289596934|ref|YP_003483630.1|	-	0.15	12.2	0.2	1.5	9.1	0.0	2.4	2	0	0	2	2	2	0	GHMP	kinases	C	terminal
ATP-synt_ab	PF00006.20	gi|289596935|ref|YP_003483631.1|	-	3.2e-65	219.6	0.0	4.2e-65	219.2	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|289596935|ref|YP_003483631.1|	-	1.8e-15	57.3	0.1	3.5e-15	56.4	0.1	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|289596935|ref|YP_003483631.1|	-	6e-13	48.8	0.8	1.2e-12	47.8	0.5	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|289596935|ref|YP_003483631.1|	-	1.9e-07	30.8	0.9	4.8e-07	29.5	0.6	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab	PF00006.20	gi|289596936|ref|YP_003483632.1|	-	9.5e-101	335.7	0.0	2.4e-100	334.4	0.0	1.7	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|289596936|ref|YP_003483632.1|	-	2.2e-20	73.1	0.6	7.4e-20	71.5	0.5	1.8	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|289596936|ref|YP_003483632.1|	-	2.2e-15	56.5	4.0	2.2e-15	56.5	2.8	1.9	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
DUF706	PF05153.10	gi|289596936|ref|YP_003483632.1|	-	0.17	11.2	0.0	0.29	10.4	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF706)
ATP-synt_F	PF01990.12	gi|289596937|ref|YP_003483633.1|	-	1.7e-20	73.1	0.3	2e-20	72.9	0.2	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
Phycobilisome	PF00502.14	gi|289596937|ref|YP_003483633.1|	-	0.00037	20.2	0.0	0.00053	19.7	0.0	1.1	1	0	0	1	1	1	1	Phycobilisome	protein
vATP-synt_AC39	PF01992.11	gi|289596938|ref|YP_003483634.1|	-	2.7e-35	122.1	11.0	3.4e-35	121.7	7.6	1.1	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
vATP-synt_E	PF01991.13	gi|289596939|ref|YP_003483635.1|	-	7.8e-11	41.6	15.2	1.5e-10	40.6	10.4	1.6	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
V-ATPase_G	PF03179.10	gi|289596939|ref|YP_003483635.1|	-	0.0082	16.4	7.6	0.016	15.5	5.3	1.4	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
GvpL_GvpF	PF06386.6	gi|289596939|ref|YP_003483635.1|	-	0.36	10.3	7.5	0.87	9.1	5.2	1.7	1	1	0	1	1	1	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
ATP-synt_B	PF00430.13	gi|289596939|ref|YP_003483635.1|	-	2.7	7.8	7.7	2.6	7.8	1.7	2.3	1	1	0	2	2	2	0	ATP	synthase	B/B'	CF(0)
Endonuc_Holl	PF10107.4	gi|289596939|ref|YP_003483635.1|	-	9.5	5.8	10.1	1.1	8.9	0.1	2.4	1	1	1	2	2	2	0	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
ATP-synt_C	PF00137.16	gi|289596940|ref|YP_003483636.1|	-	2.4e-89	293.2	129.9	9.4e-19	67.0	10.3	6.8	7	0	0	7	7	7	6	ATP	synthase	subunit	C
PKD	PF00801.15	gi|289596940|ref|YP_003483636.1|	-	0.0012	18.5	0.6	0.0028	17.3	0.4	1.6	1	0	0	1	1	1	1	PKD	domain
V_ATPase_I	PF01496.14	gi|289596941|ref|YP_003483637.1|	-	4.8e-79	266.1	19.3	6.9e-55	186.2	0.0	3.1	3	0	0	3	3	3	3	V-type	ATPase	116kDa	subunit	family
DBINO	PF13892.1	gi|289596941|ref|YP_003483637.1|	-	0.0039	17.2	0.6	0.01	15.8	0.4	1.7	1	0	0	1	1	1	1	DNA-binding	domain
DUF812	PF05667.6	gi|289596941|ref|YP_003483637.1|	-	0.0074	14.8	0.3	0.012	14.1	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
ENT	PF03735.9	gi|289596941|ref|YP_003483637.1|	-	0.019	14.6	0.9	0.039	13.6	0.1	1.9	2	0	0	2	2	2	0	ENT	domain
ATP-synt_B	PF00430.13	gi|289596942|ref|YP_003483638.1|	-	0.00029	20.6	17.7	0.00041	20.1	12.3	1.3	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
Muted	PF14942.1	gi|289596942|ref|YP_003483638.1|	-	0.0016	18.3	11.0	0.0023	17.8	7.6	1.2	1	0	0	1	1	1	1	Organelle	biogenesis,	Muted-like	protein
V-ATPase_G	PF03179.10	gi|289596942|ref|YP_003483638.1|	-	0.013	15.8	17.6	0.016	15.4	12.2	1.2	1	0	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
UvrD-helicase	PF00580.16	gi|289596942|ref|YP_003483638.1|	-	0.029	13.6	5.7	0.035	13.4	4.0	1.0	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
FBP	PF07299.6	gi|289596942|ref|YP_003483638.1|	-	0.066	12.5	3.4	0.082	12.2	2.4	1.2	1	0	0	1	1	1	0	Fibronectin-binding	protein	(FBP)
HrpE	PF06188.7	gi|289596942|ref|YP_003483638.1|	-	0.085	12.5	4.2	0.09	12.5	2.9	1.1	1	0	0	1	1	1	0	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
Prominin	PF05478.6	gi|289596942|ref|YP_003483638.1|	-	0.1	10.1	2.3	0.1	10.1	1.6	1.1	1	0	0	1	1	1	0	Prominin
BTV_NS2	PF04514.7	gi|289596942|ref|YP_003483638.1|	-	0.14	11.0	12.9	0.16	10.8	9.0	1.0	1	0	0	1	1	1	0	Bluetongue	virus	non-structural	protein	NS2
DinB_2	PF12867.2	gi|289596942|ref|YP_003483638.1|	-	0.14	12.4	0.2	0.22	11.8	0.2	1.3	1	1	0	1	1	1	0	DinB	superfamily
DUF3584	PF12128.3	gi|289596942|ref|YP_003483638.1|	-	0.61	7.3	12.7	0.72	7.0	8.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DivIVA	PF05103.8	gi|289596942|ref|YP_003483638.1|	-	0.73	9.8	14.9	1.1	9.3	10.3	1.4	1	0	0	1	1	1	0	DivIVA	protein
Phage_int_SAM_5	PF13102.1	gi|289596942|ref|YP_003483638.1|	-	0.83	9.6	9.7	1	9.3	6.7	1.1	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
DUF883	PF05957.8	gi|289596942|ref|YP_003483638.1|	-	0.88	10.0	9.9	1.4	9.4	1.3	2.1	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
tRNA-synt_1b	PF00579.20	gi|289596942|ref|YP_003483638.1|	-	0.97	8.4	3.9	1.1	8.3	2.7	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(W	and	Y)
ING	PF12998.2	gi|289596942|ref|YP_003483638.1|	-	1.4	9.2	11.1	3	8.1	6.6	1.9	1	1	1	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
DUF1488	PF07369.6	gi|289596942|ref|YP_003483638.1|	-	1.8	8.4	7.5	0.79	9.6	1.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1488)
Mnd1	PF03962.10	gi|289596942|ref|YP_003483638.1|	-	2	8.0	14.8	2.5	7.7	10.3	1.1	1	0	0	1	1	1	0	Mnd1	family
DUF342	PF03961.8	gi|289596942|ref|YP_003483638.1|	-	2.4	6.5	11.9	2.7	6.2	8.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Vps51	PF08700.6	gi|289596942|ref|YP_003483638.1|	-	2.6	7.9	8.3	0.65	9.8	2.2	2.2	1	1	1	2	2	2	0	Vps51/Vps67
hDGE_amylase	PF14701.1	gi|289596942|ref|YP_003483638.1|	-	3.5	6.4	5.9	3.8	6.2	4.1	1.0	1	0	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
DUF1700	PF08006.6	gi|289596942|ref|YP_003483638.1|	-	4.3	6.5	6.1	4.2	6.6	3.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
OmpH	PF03938.9	gi|289596942|ref|YP_003483638.1|	-	4.5	7.1	9.0	5.2	6.9	6.2	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
CENP-H	PF05837.7	gi|289596942|ref|YP_003483638.1|	-	4.7	7.4	13.4	6.7	6.9	9.2	1.4	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
V-SNARE	PF05008.10	gi|289596942|ref|YP_003483638.1|	-	5.3	7.2	14.7	3.2	7.9	7.7	1.9	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
TMPIT	PF07851.8	gi|289596942|ref|YP_003483638.1|	-	5.9	5.8	9.0	7.1	5.5	6.2	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
PA26	PF04636.8	gi|289596942|ref|YP_003483638.1|	-	6.4	5.3	6.5	7	5.2	4.5	1.0	1	0	0	1	1	1	0	PA26	p53-induced	protein	(sestrin)
HAUS-augmin3	PF14932.1	gi|289596942|ref|YP_003483638.1|	-	7	5.7	12.5	3.4	6.7	2.1	2.0	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
PTPlike_phytase	PF14566.1	gi|289596942|ref|YP_003483638.1|	-	9.5	6.2	10.5	14	5.7	7.3	1.4	1	1	0	1	1	1	0	Inositol	hexakisphosphate
HAUS6_N	PF14661.1	gi|289596942|ref|YP_003483638.1|	-	9.6	5.4	9.2	12	5.2	6.4	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
LamB_YcsF	PF03746.11	gi|289596943|ref|YP_003483639.1|	-	1.3e-107	358.3	0.0	1.5e-107	358.2	0.0	1.0	1	0	0	1	1	1	1	LamB/YcsF	family
AHS1	PF02682.11	gi|289596944|ref|YP_003483640.1|	-	1.9e-78	262.5	0.0	2.2e-78	262.3	0.0	1.0	1	0	0	1	1	1	1	Allophanate	hydrolase	subunit	1
AHS2	PF02626.10	gi|289596945|ref|YP_003483641.1|	-	1.3e-89	300.1	0.0	1.5e-89	299.9	0.0	1.0	1	0	0	1	1	1	1	Allophanate	hydrolase	subunit	2
Ala_racemase_N	PF01168.15	gi|289596946|ref|YP_003483642.1|	-	6.3e-37	127.2	0.0	7e-37	127.0	0.0	1.0	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Orn_Arg_deC_N	PF02784.11	gi|289596946|ref|YP_003483642.1|	-	0.018	14.2	0.0	0.035	13.2	0.0	1.5	1	1	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
INT_SG_DDX_CT_C	PF15300.1	gi|289596946|ref|YP_003483642.1|	-	0.035	13.5	0.4	0.26	10.7	0.0	2.6	3	0	0	3	3	3	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
DUF2840	PF11000.3	gi|289596946|ref|YP_003483642.1|	-	0.052	13.0	0.5	2.2	7.8	0.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2840)
DUF1273	PF06908.6	gi|289596946|ref|YP_003483642.1|	-	0.054	13.1	0.3	0.26	10.9	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1273)
Peptidase_C15	PF01470.12	gi|289596947|ref|YP_003483643.1|	-	6e-82	274.4	0.0	6.8e-82	274.2	0.0	1.0	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
ABC_membrane	PF00664.18	gi|289596948|ref|YP_003483644.1|	-	1.6e-38	132.6	22.7	2.3e-38	132.2	15.7	1.2	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|289596948|ref|YP_003483644.1|	-	1.2e-35	122.7	0.0	2.3e-35	121.8	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596948|ref|YP_003483644.1|	-	9.2e-08	32.3	2.6	0.0014	18.6	0.1	3.3	2	1	1	3	3	3	2	AAA	domain
AAA_17	PF13207.1	gi|289596948|ref|YP_003483644.1|	-	9.4e-07	29.6	0.1	2.2e-06	28.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|289596948|ref|YP_003483644.1|	-	1e-06	28.4	0.0	4e-06	26.4	0.0	2.0	2	0	0	2	2	1	1	Part	of	AAA	domain
NTPase_1	PF03266.10	gi|289596948|ref|YP_003483644.1|	-	2.8e-05	23.8	0.4	0.0013	18.5	0.0	2.4	2	0	0	2	2	2	1	NTPase
AAA_18	PF13238.1	gi|289596948|ref|YP_003483644.1|	-	3.6e-05	24.0	0.0	9.4e-05	22.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289596948|ref|YP_003483644.1|	-	0.0002	21.3	0.0	0.00037	20.5	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|289596948|ref|YP_003483644.1|	-	0.00025	20.4	0.0	0.00061	19.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|289596948|ref|YP_003483644.1|	-	0.0011	17.9	0.0	0.0029	16.5	0.0	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|289596948|ref|YP_003483644.1|	-	0.0012	19.0	0.1	0.0061	16.7	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289596948|ref|YP_003483644.1|	-	0.0015	18.4	0.0	0.0041	17.0	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|289596948|ref|YP_003483644.1|	-	0.0023	18.1	0.1	0.0066	16.6	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_10	PF12846.2	gi|289596948|ref|YP_003483644.1|	-	0.0035	16.8	0.0	0.0067	15.9	0.0	1.4	1	0	0	1	1	1	1	AAA-like	domain
Zeta_toxin	PF06414.7	gi|289596948|ref|YP_003483644.1|	-	0.0046	16.0	0.0	0.012	14.6	0.0	1.7	2	0	0	2	2	1	1	Zeta	toxin
ResIII	PF04851.10	gi|289596948|ref|YP_003483644.1|	-	0.0062	16.3	0.1	0.041	13.7	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
G-alpha	PF00503.15	gi|289596948|ref|YP_003483644.1|	-	0.011	14.4	0.0	0.016	13.9	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_30	PF13604.1	gi|289596948|ref|YP_003483644.1|	-	0.015	14.8	0.0	0.031	13.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|289596948|ref|YP_003483644.1|	-	0.018	13.7	0.0	0.031	12.9	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA-ATPase_like	PF09820.4	gi|289596948|ref|YP_003483644.1|	-	0.018	14.2	1.2	0.54	9.3	0.4	2.3	2	0	0	2	2	2	0	Predicted	AAA-ATPase
Mg_chelatase	PF01078.16	gi|289596948|ref|YP_003483644.1|	-	0.021	14.0	0.0	0.04	13.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_23	PF13476.1	gi|289596948|ref|YP_003483644.1|	-	0.021	15.1	0.1	0.021	15.1	0.1	2.1	4	0	0	4	4	1	0	AAA	domain
AAA_5	PF07728.9	gi|289596948|ref|YP_003483644.1|	-	0.027	14.2	0.0	0.065	12.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.1	gi|289596948|ref|YP_003483644.1|	-	0.031	14.2	0.0	0.054	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|289596948|ref|YP_003483644.1|	-	0.032	13.0	0.0	0.058	12.1	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_13	PF13166.1	gi|289596948|ref|YP_003483644.1|	-	0.033	12.6	0.0	2	6.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
SMC_N	PF02463.14	gi|289596948|ref|YP_003483644.1|	-	0.056	12.6	0.2	2.4	7.3	0.1	2.4	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
SRP54	PF00448.17	gi|289596948|ref|YP_003483644.1|	-	0.061	12.7	0.0	0.14	11.5	0.0	1.7	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
FtsK_SpoIIIE	PF01580.13	gi|289596948|ref|YP_003483644.1|	-	0.068	12.6	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|289596948|ref|YP_003483644.1|	-	0.077	12.8	0.0	0.26	11.1	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
DUF815	PF05673.8	gi|289596948|ref|YP_003483644.1|	-	0.079	11.8	0.0	0.14	11.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
DAP3	PF10236.4	gi|289596948|ref|YP_003483644.1|	-	0.084	11.7	0.0	0.21	10.5	0.0	1.5	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
KTI12	PF08433.5	gi|289596948|ref|YP_003483644.1|	-	0.096	11.8	0.0	0.2	10.8	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_25	PF13481.1	gi|289596948|ref|YP_003483644.1|	-	0.1	12.0	0.0	0.21	10.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|289596948|ref|YP_003483644.1|	-	0.11	11.8	0.0	0.37	10.2	0.0	1.9	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_11	PF13086.1	gi|289596948|ref|YP_003483644.1|	-	0.14	11.6	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|289596948|ref|YP_003483644.1|	-	0.16	11.6	0.0	0.34	10.5	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
Viral_helicase1	PF01443.13	gi|289596948|ref|YP_003483644.1|	-	0.18	11.2	0.0	0.28	10.6	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RuvA_C	PF07499.8	gi|289596948|ref|YP_003483644.1|	-	0.24	11.5	1.1	18	5.5	0.1	2.8	3	0	0	3	3	2	0	RuvA,	C-terminal	domain
ABC_membrane	PF00664.18	gi|289596949|ref|YP_003483645.1|	-	1.1e-49	169.3	15.0	1.4e-49	168.9	10.4	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|289596949|ref|YP_003483645.1|	-	5.8e-31	107.6	0.0	1e-30	106.8	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289596949|ref|YP_003483645.1|	-	3.4e-06	27.2	0.5	0.022	14.7	0.0	2.9	2	1	1	3	3	3	2	AAA	domain
AAA	PF00004.24	gi|289596949|ref|YP_003483645.1|	-	0.0012	19.0	0.4	0.052	13.7	0.2	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|289596949|ref|YP_003483645.1|	-	0.0016	19.2	0.1	0.006	17.3	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|289596949|ref|YP_003483645.1|	-	0.0031	16.9	0.2	0.014	14.8	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
ABC_membrane_2	PF06472.10	gi|289596949|ref|YP_003483645.1|	-	0.0048	16.0	5.5	0.0048	16.0	3.8	1.8	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region	2
AAA_22	PF13401.1	gi|289596949|ref|YP_003483645.1|	-	0.0072	16.4	0.0	0.032	14.3	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|289596949|ref|YP_003483645.1|	-	0.012	15.9	0.5	0.048	13.9	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
SMC_N	PF02463.14	gi|289596949|ref|YP_003483645.1|	-	0.018	14.2	0.0	0.042	13.0	0.0	1.6	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
ATP-synt_ab	PF00006.20	gi|289596949|ref|YP_003483645.1|	-	0.074	12.5	0.1	11	5.4	0.0	2.5	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|289596949|ref|YP_003483645.1|	-	0.095	12.4	0.1	0.4	10.4	0.0	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DEAD	PF00270.24	gi|289596949|ref|YP_003483645.1|	-	0.12	11.9	0.0	0.53	9.7	0.0	2.0	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_30	PF13604.1	gi|289596949|ref|YP_003483645.1|	-	0.12	11.9	0.4	7.9	6.0	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
Zeta_toxin	PF06414.7	gi|289596949|ref|YP_003483645.1|	-	0.16	11.0	1.4	0.47	9.5	0.1	2.3	3	0	0	3	3	3	0	Zeta	toxin
ABC_membrane_3	PF13748.1	gi|289596949|ref|YP_003483645.1|	-	0.57	9.1	12.4	2.6	6.9	6.6	2.6	2	1	0	2	2	2	0	ABC	transporter	transmembrane	region
adh_short	PF00106.20	gi|289596950|ref|YP_003483646.1|	-	8.4e-38	129.9	0.1	1e-37	129.6	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|289596950|ref|YP_003483646.1|	-	1.9e-23	83.4	0.0	2.5e-23	83.0	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|289596950|ref|YP_003483646.1|	-	1e-15	57.8	0.0	1.4e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|289596950|ref|YP_003483646.1|	-	4.2e-06	26.3	0.1	9.6e-06	25.1	0.1	1.6	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
DUF1776	PF08643.5	gi|289596950|ref|YP_003483646.1|	-	0.11	11.6	0.0	0.9	8.6	0.0	1.9	2	0	0	2	2	2	0	Fungal	family	of	unknown	function	(DUF1776)
Peptidase_A17	PF05380.8	gi|289596950|ref|YP_003483646.1|	-	0.18	11.6	0.0	0.28	11.0	0.0	1.3	1	0	0	1	1	1	0	Pao	retrotransposon	peptidase
Thioredoxin_3	PF13192.1	gi|289596951|ref|YP_003483647.1|	-	8.5e-28	95.9	0.2	1.5e-18	66.3	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_9	PF14595.1	gi|289596951|ref|YP_003483647.1|	-	3.3e-10	39.6	0.3	0.00057	19.4	0.2	2.3	1	1	1	2	2	2	2	Thioredoxin
Glutaredoxin	PF00462.19	gi|289596951|ref|YP_003483647.1|	-	1.2e-08	34.7	2.0	5.2e-05	23.1	0.2	3.4	3	2	0	3	3	3	2	Glutaredoxin
Thioredoxin	PF00085.15	gi|289596951|ref|YP_003483647.1|	-	5.1e-07	29.3	0.1	0.016	14.8	0.1	2.2	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.1	gi|289596951|ref|YP_003483647.1|	-	8.4e-07	29.1	3.8	0.41	10.8	0.3	4.1	2	2	0	2	2	2	2	Thioredoxin-like	domain
Thioredoxin_4	PF13462.1	gi|289596951|ref|YP_003483647.1|	-	0.00032	20.7	1.2	2.5	8.0	0.0	3.4	3	1	1	4	4	4	2	Thioredoxin
Thioredoxin_8	PF13905.1	gi|289596951|ref|YP_003483647.1|	-	0.013	15.5	0.3	9.5	6.4	0.0	3.6	2	2	2	4	4	4	0	Thioredoxin-like
TrbC_Ftype	PF09673.5	gi|289596951|ref|YP_003483647.1|	-	0.02	14.5	0.0	2.6	7.7	0.0	2.4	2	1	1	3	3	3	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
Redoxin	PF08534.5	gi|289596951|ref|YP_003483647.1|	-	0.051	13.1	0.0	2.7	7.5	0.0	2.2	2	0	0	2	2	2	0	Redoxin
Pyr_redox_2	PF07992.9	gi|289596952|ref|YP_003483648.1|	-	1.8e-34	119.3	0.0	3.5e-34	118.4	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289596952|ref|YP_003483648.1|	-	3.8e-20	72.8	4.0	2.8e-13	50.3	0.0	3.0	1	1	2	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|289596952|ref|YP_003483648.1|	-	1.3e-14	54.3	6.6	7.7e-12	45.4	0.0	3.1	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|289596952|ref|YP_003483648.1|	-	2.7e-11	42.9	13.7	0.0013	17.6	0.1	4.1	3	1	0	4	4	4	4	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|289596952|ref|YP_003483648.1|	-	1.2e-10	40.8	10.2	0.0013	17.7	1.2	3.6	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|289596952|ref|YP_003483648.1|	-	2.4e-10	39.8	11.2	6.1e-05	22.0	2.2	4.4	3	1	2	5	5	5	3	FAD	binding	domain
HI0933_like	PF03486.9	gi|289596952|ref|YP_003483648.1|	-	2.6e-10	39.3	10.8	0.0003	19.3	1.5	3.7	3	1	0	3	3	3	3	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|289596952|ref|YP_003483648.1|	-	5.2e-08	32.7	0.9	0.0011	18.9	0.5	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|289596952|ref|YP_003483648.1|	-	1e-07	31.3	8.6	0.00058	19.0	0.7	3.1	2	1	1	3	3	3	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|289596952|ref|YP_003483648.1|	-	9.6e-06	25.2	1.3	0.047	13.2	0.3	2.6	2	1	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_oxidored	PF12831.2	gi|289596952|ref|YP_003483648.1|	-	1e-05	24.8	8.1	3.2e-05	23.1	0.1	3.1	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|289596952|ref|YP_003483648.1|	-	0.00031	19.9	6.5	0.0073	15.4	0.3	3.0	2	1	1	3	3	3	2	Thi4	family
IlvN	PF07991.7	gi|289596952|ref|YP_003483648.1|	-	0.00033	20.0	1.0	0.0018	17.6	0.1	2.3	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Lycopene_cycl	PF05834.7	gi|289596952|ref|YP_003483648.1|	-	0.0011	17.9	1.9	0.48	9.2	0.7	3.0	2	1	1	3	3	3	1	Lycopene	cyclase	protein
K_oxygenase	PF13434.1	gi|289596952|ref|YP_003483648.1|	-	0.0011	17.9	3.2	0.081	11.8	0.0	3.1	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Shikimate_DH	PF01488.15	gi|289596952|ref|YP_003483648.1|	-	0.02	14.9	5.0	2.5	8.1	0.1	3.0	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|289596952|ref|YP_003483648.1|	-	0.054	13.7	0.6	3.1	8.0	0.0	2.4	2	0	0	2	2	2	0	Putative	NAD(P)-binding
LBR_tudor	PF09465.5	gi|289596952|ref|YP_003483648.1|	-	0.055	13.0	0.2	0.13	11.9	0.2	1.5	1	0	0	1	1	1	0	Lamin-B	receptor	of	TUDOR	domain
NAD_Gly3P_dh_N	PF01210.18	gi|289596952|ref|YP_003483648.1|	-	0.13	11.9	0.4	0.35	10.5	0.0	1.8	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FMO-like	PF00743.14	gi|289596952|ref|YP_003483648.1|	-	0.27	9.3	2.4	1.5	6.9	0.0	2.5	3	0	0	3	3	3	0	Flavin-binding	monooxygenase-like
NAD_binding_9	PF13454.1	gi|289596952|ref|YP_003483648.1|	-	0.27	10.9	8.6	4	7.1	0.0	3.4	4	0	0	4	4	4	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|289596952|ref|YP_003483648.1|	-	0.83	8.2	5.5	0.8	8.2	0.2	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
UDPG_MGDP_dh_N	PF03721.9	gi|289596952|ref|YP_003483648.1|	-	8.1	5.7	9.2	6.8	6.0	0.2	3.1	3	0	0	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
eIF-1a	PF01176.14	gi|289596953|ref|YP_003483649.1|	-	5.9e-25	86.4	0.7	7.2e-25	86.2	0.5	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RIO1	PF01163.17	gi|289596954|ref|YP_003483650.1|	-	4.7e-55	185.8	0.5	7.1e-55	185.3	0.3	1.1	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|289596954|ref|YP_003483650.1|	-	1.1e-09	37.6	0.0	3.2e-09	36.1	0.0	1.6	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.20	gi|289596954|ref|YP_003483650.1|	-	2e-07	30.4	1.3	5.4e-07	29.0	0.9	1.6	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|289596954|ref|YP_003483650.1|	-	3.4e-05	23.7	0.0	0.02	14.5	0.0	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.12	gi|289596954|ref|YP_003483650.1|	-	0.0001	21.4	0.3	0.00025	20.2	0.2	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
DUF2226	PF09987.4	gi|289596954|ref|YP_003483650.1|	-	0.026	13.6	0.2	0.041	13.0	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
KH_1	PF00013.24	gi|289596955|ref|YP_003483651.1|	-	7.7e-19	67.1	8.6	7e-10	38.4	0.2	2.3	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|289596955|ref|YP_003483651.1|	-	7.6e-12	44.6	8.3	1.8e-05	24.2	1.5	2.5	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.12	gi|289596955|ref|YP_003483651.1|	-	0.00086	18.8	9.7	0.11	12.1	1.2	3.2	2	2	0	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|289596955|ref|YP_003483651.1|	-	0.007	15.9	6.3	0.65	9.6	0.1	2.9	2	2	0	2	2	2	2	KH	domain
Na_H_Exchanger	PF00999.16	gi|289596956|ref|YP_003483652.1|	-	1.1e-57	195.3	52.0	1.4e-57	194.9	36.1	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
DUF99	PF01949.11	gi|289596957|ref|YP_003483653.1|	-	6.8e-66	220.9	0.1	7.7e-66	220.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
PTH2	PF01981.11	gi|289596958|ref|YP_003483654.1|	-	7.9e-43	144.8	0.0	8.7e-43	144.7	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
DUF1616	PF07760.6	gi|289596959|ref|YP_003483655.1|	-	2.7e-14	52.9	4.2	3.2e-14	52.7	2.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
DUF342	PF03961.8	gi|289596959|ref|YP_003483655.1|	-	0.072	11.4	0.2	0.081	11.3	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
AAA_27	PF13514.1	gi|289596959|ref|YP_003483655.1|	-	0.081	10.6	2.0	0.095	10.3	1.4	1.0	1	0	0	1	1	1	0	AAA	domain
Vma12	PF11712.3	gi|289596959|ref|YP_003483655.1|	-	0.93	9.1	6.6	0.94	9.1	0.3	2.5	2	1	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
Radical_SAM	PF04055.16	gi|289596960|ref|YP_003483656.1|	-	5e-18	65.8	0.0	2.5e-17	63.5	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
HHH_3	PF12836.2	gi|289596960|ref|YP_003483656.1|	-	9.2e-09	35.1	0.0	2.2e-08	33.9	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|289596960|ref|YP_003483656.1|	-	0.00012	21.5	0.0	0.00029	20.3	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
PsbU	PF06514.6	gi|289596960|ref|YP_003483656.1|	-	0.027	14.3	0.1	0.16	11.8	0.0	2.2	2	0	0	2	2	2	0	Photosystem	II	12	kDa	extrinsic	protein	(PsbU)
HHH_8	PF14716.1	gi|289596960|ref|YP_003483656.1|	-	0.05	13.7	0.1	4.2	7.6	0.0	2.9	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
HHH_5	PF14520.1	gi|289596960|ref|YP_003483656.1|	-	0.15	12.2	0.0	0.37	10.9	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
Cpn60_TCP1	PF00118.19	gi|289596961|ref|YP_003483657.1|	-	1.8e-174	580.9	18.8	2e-174	580.7	13.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
YwpF	PF14183.1	gi|289596961|ref|YP_003483657.1|	-	0.1	12.3	8.2	0.025	14.2	1.6	2.7	3	0	0	3	3	3	0	YwpF-like	protein
Ustilago_mating	PF05722.7	gi|289596961|ref|YP_003483657.1|	-	0.13	11.5	0.0	0.32	10.2	0.0	1.6	2	0	0	2	2	2	0	Ustilago	B	locus	mating-type	protein
Radical_SAM	PF04055.16	gi|289596961|ref|YP_003483657.1|	-	0.16	12.1	0.6	1.4	9.0	0.1	2.6	2	0	0	2	2	2	0	Radical	SAM	superfamily
Radical_SAM	PF04055.16	gi|289596962|ref|YP_003483658.1|	-	9.9e-06	25.8	0.0	2.2e-05	24.6	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289596962|ref|YP_003483658.1|	-	0.029	14.4	0.2	0.09	12.8	0.2	1.9	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289596962|ref|YP_003483658.1|	-	0.037	14.0	0.0	0.082	12.9	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Pyr_redox_3	PF13738.1	gi|289596963|ref|YP_003483659.1|	-	2.2e-15	57.2	0.0	5.6e-09	36.3	0.0	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|289596963|ref|YP_003483659.1|	-	1.4e-12	47.9	3.2	2.1e-12	47.3	0.2	2.2	1	1	2	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|289596963|ref|YP_003483659.1|	-	1.6e-08	33.8	0.1	3.8e-05	22.7	0.0	2.9	1	1	1	3	3	3	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|289596963|ref|YP_003483659.1|	-	7.4e-08	31.2	0.1	0.0025	16.3	0.0	2.3	1	1	1	2	2	2	2	HI0933-like	protein
Pyr_redox	PF00070.22	gi|289596963|ref|YP_003483659.1|	-	7.9e-08	32.5	3.6	0.00014	22.1	0.1	3.3	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|289596963|ref|YP_003483659.1|	-	1.4e-06	27.4	0.4	0.029	13.2	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|289596963|ref|YP_003483659.1|	-	4.9e-06	26.4	0.0	1.3e-05	25.0	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|289596963|ref|YP_003483659.1|	-	3.8e-05	22.9	0.0	0.00023	20.3	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|289596963|ref|YP_003483659.1|	-	3.9e-05	23.4	0.1	0.019	14.7	0.0	2.4	1	1	1	2	2	2	2	FAD-NAD(P)-binding
Thi4	PF01946.12	gi|289596963|ref|YP_003483659.1|	-	0.00077	18.6	0.1	0.0015	17.6	0.0	1.6	1	0	0	1	1	1	1	Thi4	family
Shikimate_DH	PF01488.15	gi|289596963|ref|YP_003483659.1|	-	0.0068	16.5	0.5	0.62	10.1	0.0	2.7	2	1	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|289596963|ref|YP_003483659.1|	-	0.007	16.6	0.5	1.1	9.5	0.0	2.5	2	1	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|289596963|ref|YP_003483659.1|	-	0.052	13.5	0.9	5	7.1	0.0	2.5	2	0	0	2	2	2	0	TrkA-N	domain
FAD_oxidored	PF12831.2	gi|289596963|ref|YP_003483659.1|	-	0.069	12.2	0.0	0.17	10.9	0.0	1.4	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|289596963|ref|YP_003483659.1|	-	0.093	11.3	2.2	0.96	8.0	0.1	2.9	3	1	1	4	4	4	0	Tryptophan	halogenase
FAD_binding_2	PF00890.19	gi|289596963|ref|YP_003483659.1|	-	0.1	11.4	0.1	0.16	10.7	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
CPSase_L_chain	PF00289.17	gi|289596963|ref|YP_003483659.1|	-	0.11	12.5	0.1	13	5.9	0.0	2.4	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Lycopene_cycl	PF05834.7	gi|289596963|ref|YP_003483659.1|	-	0.12	11.2	0.1	0.23	10.3	0.0	1.4	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Isochorismatase	PF00857.15	gi|289596964|ref|YP_003483660.1|	-	5.2e-40	137.1	0.0	6e-40	137.0	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
UPF0231	PF06062.6	gi|289596964|ref|YP_003483660.1|	-	0.086	12.7	0.2	0.14	12.0	0.1	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0231)
Amidohydro_1	PF01979.15	gi|289596965|ref|YP_003483661.1|	-	2.2e-21	76.8	2.0	2.5e-20	73.4	1.4	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|289596965|ref|YP_003483661.1|	-	2.7e-17	63.7	0.0	6.3e-11	42.8	0.0	2.2	1	1	1	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|289596965|ref|YP_003483661.1|	-	1.2e-15	57.0	0.0	3.6e-15	55.5	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|289596965|ref|YP_003483661.1|	-	7.4e-15	55.0	1.3	4.3e-09	36.0	0.1	2.5	1	1	1	2	2	2	2	Amidohydrolase	family
Acetyltransf_1	PF00583.19	gi|289596966|ref|YP_003483662.1|	-	7.8e-15	54.6	0.1	1.2e-14	54.1	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|289596966|ref|YP_003483662.1|	-	1.8e-10	40.8	0.1	2.7e-10	40.2	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|289596966|ref|YP_003483662.1|	-	8.7e-09	35.5	0.0	1.1e-08	35.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|289596966|ref|YP_003483662.1|	-	3.5e-08	33.5	0.2	1e-07	32.0	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|289596966|ref|YP_003483662.1|	-	3.7e-05	23.5	0.0	0.00046	20.0	0.0	2.2	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|289596966|ref|YP_003483662.1|	-	5.1e-05	23.2	0.0	9.7e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|289596966|ref|YP_003483662.1|	-	5.3e-05	22.8	0.1	8.3e-05	22.2	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|289596966|ref|YP_003483662.1|	-	0.00089	19.4	0.1	0.0019	18.3	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|289596966|ref|YP_003483662.1|	-	0.023	14.5	0.0	0.036	13.9	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
AdoMet_Synthase	PF01941.14	gi|289596967|ref|YP_003483663.1|	-	5.1e-172	571.8	2.3	5.9e-172	571.6	1.6	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
S-AdoMet_synt_N	PF00438.15	gi|289596967|ref|YP_003483663.1|	-	0.11	12.6	0.2	2.1	8.6	0.0	2.6	2	0	0	2	2	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
Queuosine_synth	PF02547.10	gi|289596968|ref|YP_003483664.1|	-	8.9e-126	419.2	0.0	1e-125	419.0	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein
Serpin	PF00079.15	gi|289596970|ref|YP_003483666.1|	-	7.1e-107	357.7	0.1	8.2e-107	357.5	0.1	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
MoaC	PF01967.16	gi|289596971|ref|YP_003483667.1|	-	3.3e-48	162.7	0.7	3.7e-48	162.6	0.5	1.0	1	0	0	1	1	1	1	MoaC	family
DUF4159	PF13709.1	gi|289596971|ref|YP_003483667.1|	-	0.07	12.2	0.0	0.08	12.0	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4159)
MoCF_biosynth	PF00994.19	gi|289596972|ref|YP_003483668.1|	-	3.2e-27	94.6	0.2	3.8e-27	94.4	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
XhoI	PF04555.8	gi|289596972|ref|YP_003483668.1|	-	0.062	12.6	0.0	0.083	12.2	0.0	1.1	1	0	0	1	1	1	0	Restriction	endonuclease	XhoI
DUF202	PF02656.10	gi|289596973|ref|YP_003483669.1|	-	1.6	8.9	5.1	10	6.3	0.6	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
DUF3278	PF11683.3	gi|289596973|ref|YP_003483669.1|	-	6.7	6.7	9.6	0.3	11.0	1.1	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3278)
Peptidase_M18	PF02127.10	gi|289596974|ref|YP_003483670.1|	-	7.6e-117	390.4	0.0	8.7e-117	390.2	0.0	1.0	1	0	0	1	1	1	1	Aminopeptidase	I	zinc	metalloprotease	(M18)
Peptidase_M42	PF05343.9	gi|289596974|ref|YP_003483670.1|	-	6.9e-07	28.3	0.2	0.0037	16.0	0.0	2.6	3	0	0	3	3	3	2	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.23	gi|289596974|ref|YP_003483670.1|	-	0.00071	19.1	0.0	0.001	18.6	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Herpes_UL92	PF03048.9	gi|289596974|ref|YP_003483670.1|	-	0.13	11.8	0.1	0.32	10.5	0.0	1.6	2	0	0	2	2	2	0	UL92	family
Memo	PF01875.12	gi|289596975|ref|YP_003483671.1|	-	6.6e-74	248.2	0.0	7.6e-74	248.0	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|289596975|ref|YP_003483671.1|	-	1.3e-09	37.4	0.0	1.6e-09	37.1	0.0	1.1	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Ribosomal_S2	PF00318.15	gi|289596976|ref|YP_003483672.1|	-	1.1e-40	139.0	0.1	1.9e-19	69.7	0.3	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Enolase_C	PF00113.17	gi|289596977|ref|YP_003483673.1|	-	4.9e-67	225.9	1.3	6.2e-67	225.6	0.5	1.4	2	0	0	2	2	2	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|289596977|ref|YP_003483673.1|	-	4.4e-38	130.1	0.0	7.4e-38	129.4	0.0	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MAAL_C	PF07476.6	gi|289596977|ref|YP_003483673.1|	-	6.7e-06	25.2	0.1	1.2e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
MR_MLE	PF01188.16	gi|289596977|ref|YP_003483673.1|	-	0.00026	21.4	0.0	0.00066	20.1	0.0	1.7	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_C	PF13378.1	gi|289596977|ref|YP_003483673.1|	-	0.036	14.0	0.1	1.7	8.6	0.0	2.6	2	0	0	2	2	2	0	Enolase	C-terminal	domain-like
DUF2061	PF09834.4	gi|289596977|ref|YP_003483673.1|	-	0.24	11.6	0.6	11	6.3	0.0	2.5	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2061)
Cytochrom_C1	PF02167.10	gi|289596978|ref|YP_003483674.1|	-	0.062	12.9	0.0	0.086	12.4	0.0	1.1	1	0	0	1	1	1	0	Cytochrome	C1	family
tRNA-Thr_ED	PF08915.6	gi|289596979|ref|YP_003483675.1|	-	6.5e-52	175.1	0.7	1.2e-51	174.2	0.5	1.5	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|289596979|ref|YP_003483675.1|	-	1.3e-24	86.6	1.2	3e-24	85.5	0.8	1.6	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|289596979|ref|YP_003483675.1|	-	3.9e-17	61.9	0.8	1.7e-16	59.9	0.5	2.2	1	0	0	1	1	1	1	Anticodon	binding	domain
DUF2721	PF11026.3	gi|289596980|ref|YP_003483676.1|	-	2.6e-25	88.5	3.1	2.9e-25	88.4	2.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
Rax2	PF12768.2	gi|289596980|ref|YP_003483676.1|	-	0.026	13.7	0.1	0.031	13.4	0.1	1.2	1	0	0	1	1	1	0	Cortical	protein	marker	for	cell	polarity
SUR7	PF06687.7	gi|289596980|ref|YP_003483676.1|	-	0.19	11.2	7.7	0.16	11.5	4.9	1.2	1	1	0	1	1	1	0	SUR7/PalI	family
DUF2207	PF09972.4	gi|289596980|ref|YP_003483676.1|	-	0.43	9.0	3.0	0.47	8.9	2.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
CBS	PF00571.23	gi|289596982|ref|YP_003483678.1|	-	6.8e-42	141.0	2.2	3.5e-21	74.7	0.2	2.1	2	0	0	2	2	2	2	CBS	domain
Peptidase_S29	PF02907.10	gi|289596982|ref|YP_003483678.1|	-	0.019	14.5	0.0	4.8	6.7	0.0	2.2	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
Trypsin_2	PF13365.1	gi|289596982|ref|YP_003483678.1|	-	0.034	14.1	0.0	1.7	8.6	0.0	2.2	2	0	0	2	2	2	0	Trypsin-like	peptidase	domain
Peptidase_S32	PF05579.8	gi|289596982|ref|YP_003483678.1|	-	0.05	12.5	0.0	2.6	6.9	0.0	2.1	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
Ribosomal_L9_C	PF03948.9	gi|289596982|ref|YP_003483678.1|	-	0.076	13.1	0.0	14	5.8	0.0	2.5	2	0	0	2	2	2	0	Ribosomal	protein	L9,	C-terminal	domain
Peptidase_S7	PF00949.16	gi|289596982|ref|YP_003483678.1|	-	0.09	12.1	0.0	1	8.7	0.0	2.1	2	0	0	2	2	2	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
Arc_PepC_II	PF06847.6	gi|289596983|ref|YP_003483679.1|	-	3.9e-15	56.0	0.1	9.2e-15	54.8	0.1	1.6	1	0	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminus	Type	II
CbiN	PF02553.10	gi|289596983|ref|YP_003483679.1|	-	0.014	15.3	0.3	0.087	12.8	0.0	2.3	1	1	1	2	2	2	0	Cobalt	transport	protein	component	CbiN
PDDEXK_1	PF12705.2	gi|289596984|ref|YP_003483680.1|	-	2e-25	89.6	0.2	2.3e-25	89.4	0.1	1.0	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|289596984|ref|YP_003483680.1|	-	4.6e-12	46.1	0.1	2.4e-09	37.3	0.0	2.1	1	1	1	2	2	2	2	Domain	of	unknown	function	DUF83
DUF911	PF06023.7	gi|289596984|ref|YP_003483680.1|	-	0.042	13.0	0.0	0.063	12.4	0.0	1.3	1	1	0	1	1	1	0	Archaeal	protein	of	unknown	function	(DUF911)
DUF3799	PF12684.2	gi|289596984|ref|YP_003483680.1|	-	0.045	13.1	2.6	0.038	13.3	0.6	1.9	2	1	0	2	2	2	0	PDDEXK-like	domain	of	unknown	function	(DUF3799)
Phos_pyr_kin	PF08543.7	gi|289596985|ref|YP_003483681.1|	-	7.7e-58	195.5	0.0	9.4e-58	195.2	0.0	1.0	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|289596985|ref|YP_003483681.1|	-	3.1e-09	36.3	0.0	4.2e-09	35.9	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|289596985|ref|YP_003483681.1|	-	0.00031	20.1	0.0	0.00046	19.5	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
Ribosomal_L40e	PF01020.12	gi|289596986|ref|YP_003483682.1|	-	2.5e-06	26.9	7.2	3e-06	26.7	5.0	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zf-RanBP	PF00641.13	gi|289596986|ref|YP_003483682.1|	-	5.2e-05	22.2	1.9	7.6e-05	21.7	1.3	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.2	gi|289596986|ref|YP_003483682.1|	-	0.00019	21.1	1.0	0.00021	21.0	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|289596986|ref|YP_003483682.1|	-	0.0003	20.1	1.6	0.00042	19.7	1.1	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-DHHC	PF01529.15	gi|289596986|ref|YP_003483682.1|	-	0.0045	16.3	2.6	0.0048	16.3	1.8	1.1	1	0	0	1	1	1	1	DHHC	palmitoyltransferase
zf-ribbon_3	PF13248.1	gi|289596986|ref|YP_003483682.1|	-	0.0056	15.8	2.5	0.007	15.5	1.7	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
HypA	PF01155.14	gi|289596986|ref|YP_003483682.1|	-	0.073	12.7	1.0	0.078	12.6	0.7	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DNA_RNApol_7kD	PF03604.8	gi|289596986|ref|YP_003483682.1|	-	0.11	11.9	5.8	0.3	10.5	4.0	1.7	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Cytochrome_C7	PF14522.1	gi|289596986|ref|YP_003483682.1|	-	0.23	11.1	3.9	0.35	10.5	2.7	1.3	1	1	0	1	1	1	0	Cytochrome	c7
Zn_Tnp_IS1595	PF12760.2	gi|289596986|ref|YP_003483682.1|	-	0.84	9.4	4.7	3.1	7.6	0.5	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Ribosomal_L37e	PF01907.14	gi|289596986|ref|YP_003483682.1|	-	2.3	8.1	7.0	0.24	11.2	0.9	2.0	1	1	1	2	2	2	0	Ribosomal	protein	L37e
QRPTase_C	PF01729.14	gi|289596987|ref|YP_003483683.1|	-	2.8e-22	79.0	0.0	3.7e-22	78.6	0.0	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|289596987|ref|YP_003483683.1|	-	0.0014	18.3	0.0	0.0026	17.5	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Zn-ribbon_8	PF09723.5	gi|289596987|ref|YP_003483683.1|	-	0.0019	18.0	1.1	0.0036	17.2	0.8	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
NAPRTase	PF04095.11	gi|289596987|ref|YP_003483683.1|	-	0.0032	16.7	0.0	0.019	14.2	0.0	2.0	1	1	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
DNA_ligase_ZBD	PF03119.11	gi|289596987|ref|YP_003483683.1|	-	0.063	12.9	0.1	0.28	10.9	0.1	2.0	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ribbon_3	PF13248.1	gi|289596987|ref|YP_003483683.1|	-	0.069	12.3	2.1	0.13	11.4	1.5	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF2072	PF09845.4	gi|289596987|ref|YP_003483683.1|	-	0.08	12.8	0.7	0.16	11.9	0.5	1.5	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
SprT-like	PF10263.4	gi|289596987|ref|YP_003483683.1|	-	0.089	12.4	0.1	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	SprT-like	family
SH3_8	PF13457.1	gi|289596987|ref|YP_003483683.1|	-	0.098	12.8	0.1	0.21	11.7	0.1	1.6	1	0	0	1	1	1	0	SH3-like	domain
TF_Zn_Ribbon	PF08271.7	gi|289596987|ref|YP_003483683.1|	-	0.71	9.2	3.5	2	7.8	2.4	1.7	1	1	0	1	1	1	0	TFIIB	zinc-binding
zf-IS66	PF13005.2	gi|289596987|ref|YP_003483683.1|	-	2.2	8.2	4.6	1.4	8.9	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-H2C2_2	PF13465.1	gi|289596987|ref|YP_003483683.1|	-	7.7	7.0	7.0	2.2	8.7	0.4	2.7	3	0	0	3	3	3	0	Zinc-finger	double	domain
Isochorismatase	PF00857.15	gi|289596988|ref|YP_003483684.1|	-	5.8e-49	166.3	0.1	6.3e-49	166.2	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
AP2	PF00847.15	gi|289596988|ref|YP_003483684.1|	-	0.065	13.3	0.3	0.49	10.5	0.0	2.1	2	0	0	2	2	2	0	AP2	domain
DUF296	PF03479.10	gi|289596989|ref|YP_003483685.1|	-	8.6e-26	89.9	0.0	9.6e-26	89.7	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF296)
HI0933_like	PF03486.9	gi|289596989|ref|YP_003483685.1|	-	0.095	11.1	0.0	0.11	10.9	0.0	1.1	1	0	0	1	1	1	0	HI0933-like	protein
DNA_pol_B	PF00136.16	gi|289596990|ref|YP_003483686.1|	-	2.3e-69	234.3	0.0	4.3e-69	233.5	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|289596990|ref|YP_003483686.1|	-	2e-25	89.3	2.4	1.6e-12	46.9	0.2	2.5	1	1	1	2	2	2	2	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|289596990|ref|YP_003483686.1|	-	4.8e-08	32.9	1.8	3.2e-07	30.2	1.1	2.4	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|289596990|ref|YP_003483686.1|	-	1.3e-05	24.7	0.1	4e-05	23.2	0.1	1.7	1	1	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DNA_pol_B_2	PF03175.8	gi|289596990|ref|YP_003483686.1|	-	0.00015	20.5	0.0	0.00015	20.5	0.0	2.2	3	0	0	3	3	3	1	DNA	polymerase	type	B,	organellar	and	viral
T2SF	PF00482.18	gi|289596991|ref|YP_003483687.1|	-	3.3e-21	75.4	1.7	1.8e-14	53.7	0.2	3.4	4	1	0	4	4	4	2	Type	II	secretion	system	(T2SS),	protein	F
MtrG	PF04210.8	gi|289596991|ref|YP_003483687.1|	-	0.61	9.8	0.0	0.61	9.8	0.0	2.7	3	0	0	3	3	3	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
T2SE	PF00437.15	gi|289596992|ref|YP_003483688.1|	-	1.8e-48	164.8	0.0	2.4e-48	164.4	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|289596992|ref|YP_003483688.1|	-	2e-05	24.0	0.1	3.8e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|289596992|ref|YP_003483688.1|	-	0.029	14.5	0.0	0.18	11.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|289596992|ref|YP_003483688.1|	-	0.069	13.4	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
AAA_16	PF13191.1	gi|289596992|ref|YP_003483688.1|	-	0.12	12.3	0.0	0.34	10.8	0.0	1.7	2	0	0	2	2	2	0	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|289596992|ref|YP_003483688.1|	-	0.17	11.3	0.0	0.37	10.2	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_23	PF13476.1	gi|289596992|ref|YP_003483688.1|	-	0.96	9.7	6.0	0.28	11.5	0.7	2.1	2	0	0	2	2	2	0	AAA	domain
SHOCT	PF09851.4	gi|289596992|ref|YP_003483688.1|	-	3.2	7.3	6.4	6.2	6.4	2.1	2.7	2	0	0	2	2	2	0	Short	C-terminal	domain
KaiC	PF06745.8	gi|289596993|ref|YP_003483689.1|	-	2.3e-16	59.6	0.0	2.6e-16	59.4	0.0	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289596993|ref|YP_003483689.1|	-	1e-09	38.0	0.0	1.4e-09	37.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289596993|ref|YP_003483689.1|	-	0.0019	18.2	0.1	0.0033	17.4	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
PAXNEB	PF05625.6	gi|289596993|ref|YP_003483689.1|	-	0.0029	16.4	0.1	0.21	10.3	0.0	2.0	2	0	0	2	2	2	1	PAXNEB	protein
NACHT	PF05729.7	gi|289596993|ref|YP_003483689.1|	-	0.0035	17.0	0.1	0.0062	16.2	0.0	1.7	1	1	0	1	1	1	1	NACHT	domain
AAA_22	PF13401.1	gi|289596993|ref|YP_003483689.1|	-	0.0037	17.4	0.0	0.0087	16.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|289596993|ref|YP_003483689.1|	-	0.0042	16.8	0.0	0.0065	16.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|289596993|ref|YP_003483689.1|	-	0.0059	16.0	0.1	0.0074	15.7	0.1	1.4	1	1	0	1	1	1	1	AAA-like	domain
ABC_tran	PF00005.22	gi|289596993|ref|YP_003483689.1|	-	0.0064	16.7	0.1	0.011	15.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
UPF0079	PF02367.12	gi|289596993|ref|YP_003483689.1|	-	0.0068	16.0	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
RecA	PF00154.16	gi|289596993|ref|YP_003483689.1|	-	0.011	14.8	0.4	0.23	10.4	0.0	2.4	2	1	1	3	3	3	0	recA	bacterial	DNA	recombination	protein
DnaB_C	PF03796.10	gi|289596993|ref|YP_003483689.1|	-	0.012	14.5	0.1	0.18	10.6	0.0	2.0	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
AAA_23	PF13476.1	gi|289596993|ref|YP_003483689.1|	-	0.017	15.4	0.2	0.06	13.6	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|289596993|ref|YP_003483689.1|	-	0.019	14.5	0.1	0.036	13.5	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ArgK	PF03308.11	gi|289596993|ref|YP_003483689.1|	-	0.057	12.1	0.0	0.091	11.5	0.0	1.2	1	0	0	1	1	1	0	ArgK	protein
Mtp	PF03821.11	gi|289596993|ref|YP_003483689.1|	-	0.07	12.5	0.9	0.096	12.0	0.6	1.2	1	0	0	1	1	1	0	Golgi	4-transmembrane	spanning	transporter
CobU	PF02283.11	gi|289596993|ref|YP_003483689.1|	-	0.099	12.0	0.1	7.5	5.9	0.0	2.5	2	1	0	2	2	2	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
Arch_flagellin	PF01917.11	gi|289596994|ref|YP_003483690.1|	-	6.4e-16	58.5	2.7	1.3e-14	54.3	1.9	2.0	1	1	0	1	1	1	1	Archaebacterial	flagellin
CARDB	PF07705.6	gi|289596994|ref|YP_003483690.1|	-	0.0077	16.2	0.2	0.012	15.6	0.1	1.2	1	0	0	1	1	1	1	CARDB
DUF4399	PF14347.1	gi|289596994|ref|YP_003483690.1|	-	0.014	15.4	0.1	0.021	14.7	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4399)
DUF2190	PF09956.4	gi|289596994|ref|YP_003483690.1|	-	0.1	12.3	0.1	1.3	8.7	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2190)
ATP-synt_J	PF04911.7	gi|289596994|ref|YP_003483690.1|	-	0.5	9.8	2.6	16	5.0	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	j	chain
Kelch_6	PF13964.1	gi|289596995|ref|YP_003483691.1|	-	0.98	9.7	7.4	0.81	9.9	0.2	3.8	4	0	0	4	4	4	0	Kelch	motif
Arch_flagellin	PF01917.11	gi|289596996|ref|YP_003483692.1|	-	3e-30	105.2	0.9	3.7e-30	104.9	0.6	1.1	1	0	0	1	1	1	1	Archaebacterial	flagellin
DUF4363	PF14276.1	gi|289596996|ref|YP_003483692.1|	-	0.12	12.1	1.9	0.22	11.2	0.8	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4363)
GHMP_kinases_N	PF00288.21	gi|289596997|ref|YP_003483693.1|	-	4.1e-15	55.5	0.0	9.3e-15	54.4	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|289596997|ref|YP_003483693.1|	-	1.4e-14	54.0	0.0	2.7e-14	53.1	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GalKase_gal_bdg	PF10509.4	gi|289596997|ref|YP_003483693.1|	-	0.019	14.2	0.0	0.034	13.4	0.0	1.4	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
DUF2711	PF10924.3	gi|289596997|ref|YP_003483693.1|	-	0.11	11.9	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2711)
Peptidase_M42	PF05343.9	gi|289596998|ref|YP_003483694.1|	-	1.2e-86	290.0	0.4	1.4e-86	289.8	0.3	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.23	gi|289596998|ref|YP_003483694.1|	-	6.9e-10	38.7	0.0	1.1e-09	38.0	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M18	PF02127.10	gi|289596998|ref|YP_003483694.1|	-	1.5e-06	27.0	0.0	8e-05	21.3	0.0	2.2	2	0	0	2	2	2	2	Aminopeptidase	I	zinc	metalloprotease	(M18)
Peptidase_M28	PF04389.12	gi|289596998|ref|YP_003483694.1|	-	0.031	14.0	0.0	0.21	11.3	0.0	2.0	2	0	0	2	2	2	0	Peptidase	family	M28
HTH_20	PF12840.2	gi|289596999|ref|YP_003483695.1|	-	1.6e-05	24.5	0.0	2.3e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|289596999|ref|YP_003483695.1|	-	6.2e-05	22.5	0.0	9.4e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_5	PF01022.15	gi|289596999|ref|YP_003483695.1|	-	0.00015	21.3	0.0	0.00022	20.8	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|289596999|ref|YP_003483695.1|	-	0.0054	17.0	0.0	0.016	15.5	0.0	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|289596999|ref|YP_003483695.1|	-	0.01	15.5	0.1	0.018	14.7	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF3684	PF12449.3	gi|289596999|ref|YP_003483695.1|	-	0.013	13.1	0.0	0.015	12.9	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3684)
HTH_DeoR	PF08220.7	gi|289596999|ref|YP_003483695.1|	-	0.021	14.3	0.0	0.037	13.5	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_17	PF12728.2	gi|289596999|ref|YP_003483695.1|	-	0.028	14.6	0.2	0.051	13.8	0.2	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|289596999|ref|YP_003483695.1|	-	0.033	14.4	0.0	0.045	14.0	0.0	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|289596999|ref|YP_003483695.1|	-	0.054	13.0	0.0	0.088	12.4	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|289596999|ref|YP_003483695.1|	-	0.091	12.5	0.5	0.18	11.5	0.2	1.6	2	0	0	2	2	2	0	CDC6,	C	terminal
HTH_7	PF02796.10	gi|289596999|ref|YP_003483695.1|	-	0.1	12.4	0.1	0.24	11.3	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
MarR_2	PF12802.2	gi|289596999|ref|YP_003483695.1|	-	0.11	12.2	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_23	PF13384.1	gi|289596999|ref|YP_003483695.1|	-	0.13	11.9	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
LigT_PEase	PF02834.11	gi|289597001|ref|YP_003483697.1|	-	8.4e-24	83.3	0.0	2.5e-15	56.2	0.0	2.2	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|289597001|ref|YP_003483697.1|	-	5e-15	55.5	0.0	6e-15	55.2	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|289597001|ref|YP_003483697.1|	-	2e-10	40.7	0.0	2.7e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
HMA	PF00403.21	gi|289597001|ref|YP_003483697.1|	-	0.47	10.6	3.4	0.92	9.6	1.0	2.3	2	0	0	2	2	2	0	Heavy-metal-associated	domain
GCV_H	PF01597.14	gi|289597002|ref|YP_003483698.1|	-	8.9e-45	151.3	4.6	9.9e-45	151.1	3.2	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|289597002|ref|YP_003483698.1|	-	1.1e-05	24.9	1.7	4.1e-05	23.1	0.5	2.1	1	1	1	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|289597002|ref|YP_003483698.1|	-	1.4e-05	24.7	0.1	1.8e-05	24.3	0.1	1.3	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
DUF2118	PF09891.4	gi|289597002|ref|YP_003483698.1|	-	0.076	12.7	0.1	0.15	11.8	0.0	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Peptidase_M23	PF01551.17	gi|289597002|ref|YP_003483698.1|	-	0.1	12.6	0.8	8.6	6.4	0.1	2.2	1	1	1	2	2	2	0	Peptidase	family	M23
FtsJ	PF01728.14	gi|289597003|ref|YP_003483699.1|	-	1.6e-55	187.9	0.0	1.8e-55	187.7	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.1	gi|289597003|ref|YP_003483699.1|	-	9.2e-08	31.8	0.1	0.0069	15.9	0.0	3.1	1	1	1	2	2	2	2	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289597003|ref|YP_003483699.1|	-	5.3e-05	23.7	0.1	0.00028	21.4	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Nol1_Nop2_Fmu	PF01189.12	gi|289597003|ref|YP_003483699.1|	-	0.0031	16.9	0.0	0.0052	16.2	0.0	1.3	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Fibrillarin	PF01269.12	gi|289597003|ref|YP_003483699.1|	-	0.0035	16.2	0.0	0.0069	15.3	0.0	1.6	1	1	0	1	1	1	1	Fibrillarin
Methyltransf_23	PF13489.1	gi|289597003|ref|YP_003483699.1|	-	0.015	14.9	0.0	0.021	14.5	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289597003|ref|YP_003483699.1|	-	0.029	13.4	0.0	0.62	9.1	0.0	2.1	1	1	1	2	2	2	0	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.14	gi|289597003|ref|YP_003483699.1|	-	0.056	12.9	0.0	0.083	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TrkA_N	PF02254.13	gi|289597003|ref|YP_003483699.1|	-	0.071	13.1	0.1	0.11	12.4	0.1	1.4	1	1	0	1	1	1	0	TrkA-N	domain
ADH_zinc_N	PF00107.21	gi|289597003|ref|YP_003483699.1|	-	0.073	12.6	0.1	0.17	11.4	0.0	1.6	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
HTH_3	PF01381.17	gi|289597005|ref|YP_003483701.1|	-	1.1e-10	41.1	0.4	2.7e-10	39.9	0.2	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|289597005|ref|YP_003483701.1|	-	1.4e-06	28.4	0.2	3.1e-06	27.3	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|289597005|ref|YP_003483701.1|	-	3e-06	27.2	0.0	1e-05	25.4	0.0	2.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|289597005|ref|YP_003483701.1|	-	0.00076	19.0	0.9	0.0021	17.6	0.2	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|289597005|ref|YP_003483701.1|	-	0.0054	16.2	0.5	0.049	13.1	0.0	2.4	2	0	0	2	2	2	1	MerR	family	regulatory	protein
HTH_11	PF08279.7	gi|289597005|ref|YP_003483701.1|	-	0.0096	15.5	0.1	0.037	13.6	0.1	2.0	1	0	0	1	1	1	1	HTH	domain
MerR_1	PF13411.1	gi|289597005|ref|YP_003483701.1|	-	0.025	14.3	0.0	0.11	12.2	0.0	2.1	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
DUF2202	PF09968.4	gi|289597005|ref|YP_003483701.1|	-	0.046	13.3	0.2	0.13	11.9	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	domain	(DUF2202)
PRK	PF00485.13	gi|289597006|ref|YP_003483702.1|	-	2.2e-50	170.9	0.1	3.5e-50	170.2	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_17	PF13207.1	gi|289597006|ref|YP_003483702.1|	-	1.5e-05	25.7	2.2	6e-05	23.8	1.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|289597006|ref|YP_003483702.1|	-	0.00016	21.9	0.8	0.00052	20.3	0.4	2.0	1	1	1	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|289597006|ref|YP_003483702.1|	-	0.0011	19.2	0.0	0.0017	18.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_23	PF13476.1	gi|289597006|ref|YP_003483702.1|	-	0.0015	18.9	0.7	0.0018	18.6	0.5	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289597006|ref|YP_003483702.1|	-	0.003	17.5	0.0	0.0044	17.0	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
Imm27	PF15573.1	gi|289597006|ref|YP_003483702.1|	-	0.0038	16.4	1.1	0.0057	15.8	0.7	1.2	1	0	0	1	1	1	1	Immunity	protein	27
MobB	PF03205.9	gi|289597006|ref|YP_003483702.1|	-	0.0044	16.7	0.0	0.0094	15.6	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|289597006|ref|YP_003483702.1|	-	0.0059	16.1	0.1	0.011	15.2	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
UPF0079	PF02367.12	gi|289597006|ref|YP_003483702.1|	-	0.011	15.3	0.0	0.026	14.1	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_33	PF13671.1	gi|289597006|ref|YP_003483702.1|	-	0.03	14.1	0.0	0.05	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289597006|ref|YP_003483702.1|	-	0.037	13.4	1.1	0.1	11.9	0.2	1.9	2	0	0	2	2	2	0	AAA-like	domain
NACHT	PF05729.7	gi|289597006|ref|YP_003483702.1|	-	0.04	13.5	0.0	0.068	12.8	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
RNA_helicase	PF00910.17	gi|289597006|ref|YP_003483702.1|	-	0.05	13.7	0.0	0.12	12.5	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
T2SE	PF00437.15	gi|289597006|ref|YP_003483702.1|	-	0.062	12.1	0.0	0.11	11.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|289597006|ref|YP_003483702.1|	-	0.092	12.2	0.4	0.17	11.3	0.3	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
NB-ARC	PF00931.17	gi|289597006|ref|YP_003483702.1|	-	0.095	11.5	0.0	0.17	10.6	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Zeta_toxin	PF06414.7	gi|289597006|ref|YP_003483702.1|	-	0.12	11.4	0.0	0.24	10.4	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
DUF87	PF01935.12	gi|289597006|ref|YP_003483702.1|	-	0.13	12.0	3.1	0.35	10.6	2.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
TaqI_C	PF12950.2	gi|289597007|ref|YP_003483703.1|	-	2.6e-41	140.0	2.2	1.4e-40	137.7	0.4	2.6	2	0	0	2	2	2	1	TaqI-like	C-terminal	specificity	domain
Eco57I	PF07669.6	gi|289597007|ref|YP_003483703.1|	-	3.9e-19	68.9	0.4	2.5e-18	66.3	0.1	2.5	2	0	0	2	2	2	1	Eco57I	restriction-modification	methylase
N6_Mtase	PF02384.11	gi|289597007|ref|YP_003483703.1|	-	2.5e-16	59.6	0.9	1.2e-09	37.7	0.0	2.9	3	1	0	3	3	3	2	N-6	DNA	Methylase
Methyltransf_26	PF13659.1	gi|289597007|ref|YP_003483703.1|	-	2.5e-16	59.7	0.0	5e-16	58.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
HSDR_N	PF04313.9	gi|289597007|ref|YP_003483703.1|	-	7.9e-09	35.5	0.1	3.5e-06	26.8	0.0	2.8	2	1	0	2	2	2	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N_2	PF13588.1	gi|289597007|ref|YP_003483703.1|	-	9.7e-07	28.5	0.0	5.1e-06	26.2	0.0	2.3	2	1	0	2	2	2	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
UPF0020	PF01170.13	gi|289597007|ref|YP_003483703.1|	-	0.00057	19.5	0.0	0.55	9.7	0.0	2.5	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.1	gi|289597007|ref|YP_003483703.1|	-	0.0015	18.1	0.0	7.6	6.1	0.0	3.3	3	0	0	3	3	3	1	Methyltransferase	domain
MTS	PF05175.9	gi|289597007|ref|YP_003483703.1|	-	0.0077	15.6	0.0	0.17	11.2	0.0	2.8	3	0	0	3	3	3	1	Methyltransferase	small	domain
NosD	PF05048.8	gi|289597008|ref|YP_003483704.1|	-	1.3e-90	302.6	188.3	5.3e-18	65.0	18.4	8.9	1	1	6	7	7	7	7	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|289597008|ref|YP_003483704.1|	-	5.1e-88	292.7	190.4	1.2e-23	83.6	23.9	7.4	3	1	5	8	8	8	8	Right	handed	beta	helix	region
Pectate_lyase_3	PF12708.2	gi|289597008|ref|YP_003483704.1|	-	0.018	15.1	114.3	8.4	6.4	3.0	7.9	2	2	3	6	6	6	0	Pectate	lyase	superfamily	protein
NERD	PF08378.6	gi|289597009|ref|YP_003483705.1|	-	1.9e-15	57.1	0.0	3.1e-15	56.4	0.0	1.4	1	0	0	1	1	1	1	Nuclease-related	domain
DUF4131	PF13567.1	gi|289597009|ref|YP_003483705.1|	-	0.0039	16.6	0.1	0.64	9.4	0.2	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4131)
DUF2207	PF09972.4	gi|289597009|ref|YP_003483705.1|	-	0.04	12.5	1.1	0.055	12.0	0.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF2721	PF11026.3	gi|289597009|ref|YP_003483705.1|	-	0.089	12.4	1.8	0.18	11.4	1.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2721)
EMP70	PF02990.11	gi|289597009|ref|YP_003483705.1|	-	0.12	10.8	0.2	0.16	10.4	0.2	1.1	1	0	0	1	1	1	0	Endomembrane	protein	70
IncA	PF04156.9	gi|289597009|ref|YP_003483705.1|	-	1.7	8.1	4.4	7.6	6.0	0.3	2.3	2	0	0	2	2	2	0	IncA	protein
CN_hydrolase	PF00795.17	gi|289597010|ref|YP_003483706.1|	-	2.3e-31	108.5	0.0	6e-31	107.2	0.0	1.6	2	0	0	2	2	2	1	Carbon-nitrogen	hydrolase
BPL_N	PF09825.4	gi|289597011|ref|YP_003483707.1|	-	5.4e-16	58.3	1.7	8.1e-16	57.7	1.1	1.3	1	0	0	1	1	1	1	Biotin-protein	ligase,	N	terminal
Peptidase_S51	PF03575.12	gi|289597011|ref|YP_003483707.1|	-	0.0042	16.8	0.0	0.0087	15.8	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	S51
GATase_3	PF07685.9	gi|289597011|ref|YP_003483707.1|	-	0.014	15.0	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
ThuA	PF06283.6	gi|289597011|ref|YP_003483707.1|	-	0.018	14.7	0.1	0.057	13.1	0.0	1.7	1	1	0	1	1	1	0	Trehalose	utilisation
DUF4535	PF15054.1	gi|289597011|ref|YP_003483707.1|	-	0.075	12.4	2.2	0.19	11.1	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4535)
ABC_tran	PF00005.22	gi|289597012|ref|YP_003483708.1|	-	1.2e-26	93.6	0.1	2.7e-26	92.4	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289597012|ref|YP_003483708.1|	-	3.6e-20	72.0	0.6	6.5e-20	71.2	0.4	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289597012|ref|YP_003483708.1|	-	2.8e-09	37.3	1.1	2.8e-08	34.0	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|289597012|ref|YP_003483708.1|	-	0.0001	21.4	3.8	0.1	11.5	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|289597012|ref|YP_003483708.1|	-	0.00011	21.5	5.1	0.0011	18.2	3.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.1	gi|289597012|ref|YP_003483708.1|	-	0.0025	18.1	0.3	0.0056	16.9	0.1	1.7	2	0	0	2	2	1	1	AAA	domain
AAA_29	PF13555.1	gi|289597012|ref|YP_003483708.1|	-	0.0056	16.1	0.1	0.01	15.3	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ResIII	PF04851.10	gi|289597012|ref|YP_003483708.1|	-	0.0084	15.9	0.1	0.011	15.6	0.1	1.2	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SbcCD_C	PF13558.1	gi|289597012|ref|YP_003483708.1|	-	0.013	15.3	0.1	0.1	12.5	0.1	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF3987	PF13148.1	gi|289597012|ref|YP_003483708.1|	-	0.016	13.8	0.0	0.024	13.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
DEAD	PF00270.24	gi|289597012|ref|YP_003483708.1|	-	0.059	12.8	0.1	5.9	6.3	0.0	2.2	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
FtsK_SpoIIIE	PF01580.13	gi|289597012|ref|YP_003483708.1|	-	0.088	12.2	0.0	0.2	11.1	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
KaiC	PF06745.8	gi|289597012|ref|YP_003483708.1|	-	0.089	11.8	0.6	1.2	8.1	0.0	2.3	2	0	0	2	2	2	0	KaiC
DUF87	PF01935.12	gi|289597012|ref|YP_003483708.1|	-	0.092	12.5	8.4	15	5.2	5.9	2.8	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
STAS	PF01740.16	gi|289597012|ref|YP_003483708.1|	-	0.13	11.7	0.8	1.5	8.2	0.6	2.6	1	1	0	1	1	1	0	STAS	domain
AAA_22	PF13401.1	gi|289597012|ref|YP_003483708.1|	-	0.22	11.6	3.1	6.3	6.9	2.2	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289597012|ref|YP_003483708.1|	-	0.45	9.9	2.6	4.8	6.5	0.3	2.2	1	1	1	2	2	2	0	AAA-like	domain
ABC_tran	PF00005.22	gi|289597013|ref|YP_003483709.1|	-	3.2e-28	98.7	0.0	4.3e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|289597013|ref|YP_003483709.1|	-	3e-18	65.9	0.8	5.7e-18	65.0	0.5	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|289597013|ref|YP_003483709.1|	-	7.3e-09	35.9	1.2	4.8e-08	33.3	0.8	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|289597013|ref|YP_003483709.1|	-	0.0013	17.9	1.7	0.0033	16.7	1.2	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|289597013|ref|YP_003483709.1|	-	0.0015	18.0	0.5	1.1	8.5	0.1	2.2	2	0	0	2	2	2	2	AAA-like	domain
AAA_15	PF13175.1	gi|289597013|ref|YP_003483709.1|	-	0.0075	15.3	5.8	0.47	9.4	4.5	2.1	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289597013|ref|YP_003483709.1|	-	0.039	14.0	1.3	0.59	10.2	0.9	2.1	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|289597013|ref|YP_003483709.1|	-	0.062	12.7	0.1	0.096	12.1	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|289597013|ref|YP_003483709.1|	-	0.12	12.3	0.0	0.21	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
BPD_transp_1	PF00528.17	gi|289597014|ref|YP_003483710.1|	-	9.3e-31	106.7	15.4	9.3e-31	106.7	10.6	2.3	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|289597014|ref|YP_003483710.1|	-	2.5e-06	26.7	0.4	2.5e-06	26.7	0.3	3.5	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|289597015|ref|YP_003483711.1|	-	2.6e-38	131.3	16.4	2.6e-38	131.3	11.3	2.3	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
SecG	PF03840.9	gi|289597015|ref|YP_003483711.1|	-	0.048	13.3	0.0	0.048	13.3	0.0	2.9	3	1	1	4	4	4	0	Preprotein	translocase	SecG	subunit
SBP_bac_5	PF00496.17	gi|289597016|ref|YP_003483712.1|	-	1e-70	238.4	12.4	1.4e-70	238.0	8.6	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF1628	PF07790.6	gi|289597016|ref|YP_003483712.1|	-	0.092	13.5	0.5	0.39	11.4	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
AFOR_C	PF01314.13	gi|289597017|ref|YP_003483713.1|	-	5.9e-132	439.9	0.1	7.2e-132	439.6	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|289597017|ref|YP_003483713.1|	-	1.2e-76	256.5	0.0	1.9e-76	255.9	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
PqqD	PF05402.7	gi|289597017|ref|YP_003483713.1|	-	0.055	13.4	0.0	0.12	12.3	0.0	1.6	1	0	0	1	1	1	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
SHOCT	PF09851.4	gi|289597017|ref|YP_003483713.1|	-	4	7.0	6.8	0.87	9.1	0.5	2.8	3	0	0	3	3	3	0	Short	C-terminal	domain
Aminotran_3	PF00202.16	gi|289597018|ref|YP_003483714.1|	-	1.2e-106	356.3	0.0	1.5e-106	356.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Gemini_AC4_5_2	PF08464.5	gi|289597018|ref|YP_003483714.1|	-	1.1	8.9	3.2	23	4.7	0.1	3.0	4	0	0	4	4	4	0	Geminivirus	AC4/5	conserved	region
DUF61	PF01886.11	gi|289597019|ref|YP_003483715.1|	-	3.9e-10	39.6	0.2	4.5e-10	39.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
SOR_SNZ	PF01680.12	gi|289597020|ref|YP_003483716.1|	-	3e-106	353.6	8.8	7.6e-106	352.3	3.2	2.3	3	0	0	3	3	3	1	SOR/SNZ	family
ThiG	PF05690.9	gi|289597020|ref|YP_003483716.1|	-	2.4e-11	43.1	3.4	2.1e-07	30.2	0.0	2.5	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.12	gi|289597020|ref|YP_003483716.1|	-	2.6e-06	26.5	0.6	0.0044	15.8	0.0	2.3	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NanE	PF04131.9	gi|289597020|ref|YP_003483716.1|	-	0.00083	18.3	0.9	0.017	14.0	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
PcrB	PF01884.12	gi|289597020|ref|YP_003483716.1|	-	0.0027	16.9	0.0	0.0067	15.6	0.0	1.6	1	0	0	1	1	1	1	PcrB	family
NMO	PF03060.10	gi|289597020|ref|YP_003483716.1|	-	0.0039	16.4	6.6	0.0054	15.9	0.0	2.7	2	1	0	2	2	2	1	Nitronate	monooxygenase
IGPS	PF00218.16	gi|289597020|ref|YP_003483716.1|	-	0.0061	15.6	0.1	0.034	13.1	0.0	2.2	2	1	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|289597020|ref|YP_003483716.1|	-	0.012	14.8	1.0	0.6	9.3	0.0	2.8	3	1	0	3	3	3	0	Histidine	biosynthesis	protein
Phage_Mu_Gam	PF07352.7	gi|289597020|ref|YP_003483716.1|	-	0.013	14.9	0.1	0.029	13.8	0.1	1.5	1	0	0	1	1	1	0	Bacteriophage	Mu	Gam	like	protein
Trp_syntA	PF00290.15	gi|289597020|ref|YP_003483716.1|	-	0.028	12.9	0.0	0.056	11.9	0.0	1.4	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
FMN_dh	PF01070.13	gi|289597020|ref|YP_003483716.1|	-	0.031	13.1	0.2	0.33	9.7	0.0	2.1	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
DUF561	PF04481.7	gi|289597020|ref|YP_003483716.1|	-	0.036	13.0	0.0	1.1	8.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
GDPD_2	PF13653.1	gi|289597020|ref|YP_003483716.1|	-	0.14	12.4	0.1	9.4	6.5	0.0	2.7	2	0	0	2	2	2	0	Glycerophosphoryl	diester	phosphodiesterase	family
TGT	PF01702.13	gi|289597020|ref|YP_003483716.1|	-	0.23	10.7	0.9	1.1	8.4	0.1	2.2	3	0	0	3	3	3	0	Queuine	tRNA-ribosyltransferase
GrpE	PF01025.14	gi|289597021|ref|YP_003483717.1|	-	3e-40	137.4	4.2	3.3e-40	137.3	2.9	1.0	1	0	0	1	1	1	1	GrpE
AMP-binding_C_2	PF14535.1	gi|289597021|ref|YP_003483717.1|	-	0.009	16.0	0.7	0.022	14.7	0.5	1.7	1	1	1	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
DUF1351	PF07083.6	gi|289597021|ref|YP_003483717.1|	-	0.15	11.6	6.9	0.25	10.9	4.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1351)
NAC	PF01849.13	gi|289597021|ref|YP_003483717.1|	-	1.1	8.8	4.3	0.32	10.5	0.7	1.8	2	0	0	2	2	2	0	NAC	domain
FCH	PF00611.18	gi|289597021|ref|YP_003483717.1|	-	1.3	9.2	6.3	5.3	7.2	4.4	1.9	1	1	0	1	1	1	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
HSP70	PF00012.15	gi|289597022|ref|YP_003483718.1|	-	1.3e-223	743.2	12.5	7.3e-203	674.7	6.8	2.0	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.8	gi|289597022|ref|YP_003483718.1|	-	2.5e-21	75.6	6.8	2.5e-21	75.6	4.7	2.7	2	1	0	2	2	2	1	MreB/Mbl	protein
FGGY_C	PF02782.11	gi|289597022|ref|YP_003483718.1|	-	8.3e-05	22.2	0.0	0.00017	21.2	0.0	1.5	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
StbA	PF06406.6	gi|289597022|ref|YP_003483718.1|	-	0.0019	17.2	0.2	0.015	14.2	0.1	2.3	1	1	0	2	2	2	1	StbA	protein
SrfB	PF07520.6	gi|289597022|ref|YP_003483718.1|	-	0.013	13.0	0.1	0.98	6.8	0.0	2.2	2	0	0	2	2	2	0	Virulence	factor	SrfB
FtsA	PF14450.1	gi|289597022|ref|YP_003483718.1|	-	0.089	12.6	15.7	2.7	7.8	1.0	5.4	4	2	0	4	4	4	0	Cell	division	protein	FtsA
DUF4175	PF13779.1	gi|289597022|ref|YP_003483718.1|	-	0.65	7.6	10.0	0.93	7.1	7.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
Chrome_Resist	PF09828.4	gi|289597023|ref|YP_003483719.1|	-	7.1e-46	155.7	0.0	8e-46	155.5	0.0	1.0	1	0	0	1	1	1	1	Chromate	resistance	exported	protein
DnaJ	PF00226.26	gi|289597024|ref|YP_003483720.1|	-	2.8e-30	103.8	4.5	4.8e-30	103.0	3.1	1.4	1	0	0	1	1	1	1	DnaJ	domain
CTDII	PF01556.13	gi|289597024|ref|YP_003483720.1|	-	2.5e-27	94.5	9.8	1.7e-19	69.4	0.2	3.4	3	0	0	3	3	3	2	DnaJ	C	terminal	domain
DnaJ_CXXCXGXG	PF00684.14	gi|289597024|ref|YP_003483720.1|	-	4.2e-16	58.7	12.4	6.4e-16	58.1	8.6	1.3	1	0	0	1	1	1	1	DnaJ	central	domain
Cytochrome_C554	PF13435.1	gi|289597024|ref|YP_003483720.1|	-	0.18	11.8	3.9	5.7	7.0	0.5	2.2	1	1	1	2	2	2	0	Cytochrome	c554	and	c-prime
Cytochrome_C7	PF14522.1	gi|289597024|ref|YP_003483720.1|	-	0.24	11.0	4.8	0.94	9.1	3.3	1.9	1	1	0	1	1	1	0	Cytochrome	c7
DZR	PF12773.2	gi|289597024|ref|YP_003483720.1|	-	4.3	7.2	10.0	9.9	6.0	1.5	2.0	1	1	1	2	2	2	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|289597024|ref|YP_003483720.1|	-	6.7	7.1	13.7	36	4.7	0.2	3.6	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
HTH_34	PF13601.1	gi|289597026|ref|YP_003483722.1|	-	1.3e-19	69.9	0.0	1.6e-19	69.7	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|289597026|ref|YP_003483722.1|	-	2.7e-08	33.5	0.0	4.7e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289597026|ref|YP_003483722.1|	-	1.9e-07	30.6	0.0	6e-07	29.0	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|289597026|ref|YP_003483722.1|	-	0.00035	20.8	0.0	0.00049	20.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|289597026|ref|YP_003483722.1|	-	0.0011	18.7	0.0	0.0015	18.2	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HxlR	PF01638.12	gi|289597026|ref|YP_003483722.1|	-	0.0011	18.4	0.1	0.0015	18.1	0.1	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
MarR_2	PF12802.2	gi|289597026|ref|YP_003483722.1|	-	0.0034	17.0	0.0	0.0093	15.6	0.0	1.7	2	0	0	2	2	2	1	MarR	family
HTH_24	PF13412.1	gi|289597026|ref|YP_003483722.1|	-	0.013	14.9	0.0	0.026	13.8	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
KA1	PF02149.14	gi|289597026|ref|YP_003483722.1|	-	0.014	14.8	0.0	0.024	14.0	0.0	1.4	1	0	0	1	1	1	0	Kinase	associated	domain	1
TrmB	PF01978.14	gi|289597026|ref|YP_003483722.1|	-	0.019	14.6	0.0	0.042	13.5	0.0	1.7	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
LexA_DNA_bind	PF01726.11	gi|289597026|ref|YP_003483722.1|	-	0.063	12.8	0.0	0.27	10.8	0.0	2.0	2	0	0	2	2	2	0	LexA	DNA	binding	domain
DUF2774	PF11242.3	gi|289597026|ref|YP_003483722.1|	-	0.076	13.0	0.0	1.7	8.6	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2774)
MarR	PF01047.17	gi|289597026|ref|YP_003483722.1|	-	0.11	12.2	0.0	0.23	11.1	0.0	1.6	1	0	0	1	1	1	0	MarR	family
CitMHS	PF03600.11	gi|289597028|ref|YP_003483724.1|	-	3.4e-18	65.3	24.4	3.4e-18	65.3	16.9	1.7	1	1	0	1	1	1	1	Citrate	transporter
Aldolase_II	PF00596.16	gi|289597029|ref|YP_003483725.1|	-	6.7e-32	110.5	0.1	7.5e-32	110.4	0.1	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
UvsW	PF11637.3	gi|289597031|ref|YP_003483727.1|	-	0.055	13.1	1.5	0.055	13.1	1.0	4.0	3	1	0	3	3	3	0	ATP-dependant	DNA	helicase	UvsW
GP41	PF00517.12	gi|289597031|ref|YP_003483727.1|	-	0.062	12.8	10.6	0.11	12.0	1.0	2.7	2	0	0	2	2	2	0	Retroviral	envelope	protein
HTH_42	PF06224.7	gi|289597031|ref|YP_003483727.1|	-	0.11	11.8	0.1	0.11	11.8	0.1	2.5	1	1	2	3	3	3	0	Winged	helix	DNA-binding	domain
DUF948	PF06103.6	gi|289597031|ref|YP_003483727.1|	-	0.91	9.4	12.1	1.5	8.7	1.6	2.8	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
IncA	PF04156.9	gi|289597031|ref|YP_003483727.1|	-	0.94	9.0	52.1	0.33	10.5	13.6	3.1	2	1	1	3	3	3	0	IncA	protein
DUF2094	PF09867.4	gi|289597031|ref|YP_003483727.1|	-	1	9.2	4.4	13	5.6	0.4	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2094)
DUF2937	PF11157.3	gi|289597031|ref|YP_003483727.1|	-	1.1	8.5	11.1	1.2	8.3	1.1	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2937)
Acyl-CoA_dh_C	PF12806.2	gi|289597031|ref|YP_003483727.1|	-	2.8	7.8	15.3	0.83	9.5	0.9	3.4	2	1	1	3	3	3	0	Acetyl-CoA	dehydrogenase	C-terminal	like
Seryl_tRNA_N	PF02403.17	gi|289597031|ref|YP_003483727.1|	-	2.9	7.9	60.9	0.4	10.7	12.8	4.1	1	1	3	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
FUSC	PF04632.7	gi|289597031|ref|YP_003483727.1|	-	4.8	5.4	6.7	1.7	6.9	0.5	2.0	2	0	0	2	2	2	0	Fusaric	acid	resistance	protein	family
Fib_alpha	PF08702.5	gi|289597031|ref|YP_003483727.1|	-	5.4	7.1	28.6	4.5	7.3	6.3	3.1	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Laminin_II	PF06009.7	gi|289597031|ref|YP_003483727.1|	-	8.4	6.1	33.1	3.9	7.2	5.0	3.4	1	1	2	4	4	4	0	Laminin	Domain	II
DUF3450	PF11932.3	gi|289597031|ref|YP_003483727.1|	-	9.9	5.3	28.7	1.2	8.3	5.7	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Tweety	PF04906.8	gi|289597031|ref|YP_003483727.1|	-	10	4.4	8.0	2	6.7	1.2	2.2	2	0	0	2	2	2	0	Tweety
Lactamase_B_2	PF12706.2	gi|289597032|ref|YP_003483728.1|	-	4.3e-11	42.7	0.2	5.4e-11	42.4	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|289597032|ref|YP_003483728.1|	-	2.1e-05	24.3	0.0	2.9e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
AAA_25	PF13481.1	gi|289597032|ref|YP_003483728.1|	-	0.08	12.3	0.0	0.15	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
B12-binding	PF02310.14	gi|289597033|ref|YP_003483729.1|	-	4e-25	88.0	0.1	4.8e-25	87.7	0.0	1.0	1	0	0	1	1	1	1	B12	binding	domain
QRPTase_C	PF01729.14	gi|289597033|ref|YP_003483729.1|	-	0.065	12.7	0.0	0.079	12.4	0.0	1.1	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PGM_PMM_I	PF02878.11	gi|289597033|ref|YP_003483729.1|	-	0.079	12.4	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
Nitro_FeMo-Co	PF02579.12	gi|289597033|ref|YP_003483729.1|	-	0.082	12.9	0.2	18	5.4	0.0	2.3	2	1	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
AP_endonuc_2	PF01261.19	gi|289597033|ref|YP_003483729.1|	-	0.14	11.4	0.0	0.17	11.1	0.0	1.1	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
ArgK	PF03308.11	gi|289597034|ref|YP_003483730.1|	-	1.5e-72	243.6	0.1	2e-72	243.1	0.1	1.1	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|289597034|ref|YP_003483730.1|	-	6.8e-09	35.4	2.3	1.1e-08	34.6	0.6	2.1	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_29	PF13555.1	gi|289597034|ref|YP_003483730.1|	-	1.2e-05	24.7	0.0	2.3e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|289597034|ref|YP_003483730.1|	-	1.5e-05	24.7	0.2	3.7e-05	23.4	0.1	1.8	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|289597034|ref|YP_003483730.1|	-	2.8e-05	24.1	0.0	5.2e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289597034|ref|YP_003483730.1|	-	3.9e-05	23.7	0.0	0.00039	20.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|289597034|ref|YP_003483730.1|	-	4.3e-05	23.2	0.4	0.00017	21.3	0.1	2.1	2	0	0	2	2	2	1	NTPase
CbiA	PF01656.18	gi|289597034|ref|YP_003483730.1|	-	8.1e-05	22.1	0.0	0.00016	21.1	0.0	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|289597034|ref|YP_003483730.1|	-	0.00035	19.7	0.0	0.00051	19.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
AAA_25	PF13481.1	gi|289597034|ref|YP_003483730.1|	-	0.00048	19.5	0.0	0.0013	18.2	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|289597034|ref|YP_003483730.1|	-	0.00081	18.6	0.0	0.0018	17.5	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ATP_bind_1	PF03029.12	gi|289597034|ref|YP_003483730.1|	-	0.0011	18.5	0.4	0.003	17.1	0.0	1.8	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_10	PF12846.2	gi|289597034|ref|YP_003483730.1|	-	0.0014	18.0	0.1	0.0032	16.9	0.0	1.6	2	0	0	2	2	2	1	AAA-like	domain
AAA_17	PF13207.1	gi|289597034|ref|YP_003483730.1|	-	0.0017	19.1	1.9	0.0026	18.5	0.1	2.2	2	1	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|289597034|ref|YP_003483730.1|	-	0.0018	18.5	0.0	0.0039	17.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_19	PF13245.1	gi|289597034|ref|YP_003483730.1|	-	0.0055	16.4	0.1	0.012	15.3	0.1	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|289597034|ref|YP_003483730.1|	-	0.0066	16.7	0.9	0.015	15.6	0.1	2.0	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|289597034|ref|YP_003483730.1|	-	0.0086	16.2	0.1	0.026	14.6	0.0	1.9	2	0	0	2	2	1	1	RNA	helicase
AAA	PF00004.24	gi|289597034|ref|YP_003483730.1|	-	0.012	15.8	0.2	0.033	14.4	0.0	1.9	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|289597034|ref|YP_003483730.1|	-	0.015	14.9	0.1	0.034	13.7	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
MMR_HSR1	PF01926.18	gi|289597034|ref|YP_003483730.1|	-	0.022	14.6	0.1	0.056	13.3	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|289597034|ref|YP_003483730.1|	-	0.025	14.3	0.2	0.064	12.9	0.0	1.8	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_5	PF07728.9	gi|289597034|ref|YP_003483730.1|	-	0.025	14.2	0.0	0.051	13.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.1	gi|289597034|ref|YP_003483730.1|	-	0.028	14.4	0.4	0.054	13.4	0.3	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|289597034|ref|YP_003483730.1|	-	0.035	14.0	0.4	0.096	12.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
ArsR	PF09824.4	gi|289597034|ref|YP_003483730.1|	-	0.039	13.2	0.1	0.099	11.9	0.1	1.7	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
AAA_23	PF13476.1	gi|289597034|ref|YP_003483730.1|	-	0.042	14.1	0.0	0.08	13.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|289597034|ref|YP_003483730.1|	-	0.046	13.5	0.0	0.074	12.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|289597034|ref|YP_003483730.1|	-	0.071	12.3	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Mg_chelatase	PF01078.16	gi|289597034|ref|YP_003483730.1|	-	0.083	12.0	0.4	0.17	11.0	0.0	1.6	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.1	gi|289597034|ref|YP_003483730.1|	-	0.1	12.1	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
ArsA_ATPase	PF02374.10	gi|289597034|ref|YP_003483730.1|	-	0.3	10.0	2.6	0.37	9.7	0.1	2.1	2	1	0	2	2	2	0	Anion-transporting	ATPase
Glyoxalase_4	PF13669.1	gi|289597035|ref|YP_003483731.1|	-	6.6e-22	77.5	0.0	7.7e-22	77.3	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.20	gi|289597035|ref|YP_003483731.1|	-	7e-12	45.4	0.0	7.4e-12	45.3	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|289597035|ref|YP_003483731.1|	-	3.5e-09	36.7	0.0	4.6e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_2	PF12681.2	gi|289597035|ref|YP_003483731.1|	-	1.1e-05	25.9	0.0	1.4e-05	25.6	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Osmo_CC	PF08946.5	gi|289597035|ref|YP_003483731.1|	-	0.028	14.4	1.4	0.072	13.1	0.2	2.1	2	0	0	2	2	2	0	Osmosensory	transporter	coiled	coil
Glyoxalase_5	PF14696.1	gi|289597035|ref|YP_003483731.1|	-	0.055	13.4	0.0	0.066	13.1	0.0	1.1	1	0	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
MM_CoA_mutase	PF01642.17	gi|289597036|ref|YP_003483732.1|	-	1.1e-212	706.7	0.1	1.3e-212	706.5	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
SapB_1	PF05184.10	gi|289597036|ref|YP_003483732.1|	-	0.0079	15.9	2.5	0.5	10.2	0.0	3.6	4	0	0	4	4	4	1	Saposin-like	type	B,	region	1
RE_AccI	PF09545.5	gi|289597036|ref|YP_003483732.1|	-	0.009	14.6	0.0	0.016	13.7	0.0	1.3	1	0	0	1	1	1	1	AccI	restriction	endonuclease
Carboxyl_trans	PF01039.17	gi|289597037|ref|YP_003483733.1|	-	3.8e-209	695.1	0.3	4.3e-209	694.9	0.2	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|289597037|ref|YP_003483733.1|	-	5e-07	29.1	2.0	5.1e-07	29.1	0.1	2.0	3	0	0	3	3	3	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
DUF3572	PF12096.3	gi|289597037|ref|YP_003483733.1|	-	0.035	13.9	0.0	0.56	10.0	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3572)
OAD_gamma	PF04277.8	gi|289597038|ref|YP_003483734.1|	-	4e-10	39.9	1.2	7.4e-10	39.0	0.8	1.4	1	0	0	1	1	1	1	Oxaloacetate	decarboxylase,	gamma	chain
Biotin_lipoyl	PF00364.17	gi|289597039|ref|YP_003483735.1|	-	4.4e-22	77.5	5.2	6.9e-22	76.8	3.6	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|289597039|ref|YP_003483735.1|	-	6.1e-12	45.0	4.6	1.1e-07	31.3	0.0	2.2	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_2	PF12700.2	gi|289597039|ref|YP_003483735.1|	-	1.2e-06	27.9	1.8	0.0019	17.4	0.0	2.1	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|289597039|ref|YP_003483735.1|	-	2.7e-05	24.4	0.6	0.02	15.2	0.2	2.3	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|289597039|ref|YP_003483735.1|	-	2.9e-05	23.5	3.9	0.065	12.5	0.0	2.1	1	1	1	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|289597039|ref|YP_003483735.1|	-	0.00096	18.8	0.4	0.0015	18.1	0.3	1.4	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|289597039|ref|YP_003483735.1|	-	0.0087	15.7	3.5	0.033	13.9	1.5	2.3	2	1	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
NQRA	PF05896.6	gi|289597039|ref|YP_003483735.1|	-	0.012	14.7	1.2	0.04	13.1	0.8	1.7	1	1	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
PTS_EIIA_1	PF00358.15	gi|289597039|ref|YP_003483735.1|	-	0.034	13.6	0.3	0.42	10.1	0.0	2.3	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
PASTA	PF03793.14	gi|289597039|ref|YP_003483735.1|	-	0.044	13.4	1.6	1	9.0	0.2	2.4	1	1	1	2	2	2	0	PASTA	domain
Peptidase_M23	PF01551.17	gi|289597039|ref|YP_003483735.1|	-	0.089	12.8	1.2	6.5	6.8	0.1	2.7	1	1	0	1	1	1	0	Peptidase	family	M23
PYNP_C	PF07831.8	gi|289597039|ref|YP_003483735.1|	-	0.14	11.6	2.3	4.9	6.6	1.6	2.2	1	1	0	1	1	1	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
OAD_beta	PF03977.8	gi|289597040|ref|YP_003483736.1|	-	6.2e-165	548.2	30.3	7.3e-165	548.0	21.0	1.0	1	0	0	1	1	1	1	Na+-transporting	oxaloacetate	decarboxylase	beta	subunit
ABC_tran	PF00005.22	gi|289597041|ref|YP_003483737.1|	-	4.2e-28	98.3	0.0	9e-28	97.2	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|289597041|ref|YP_003483737.1|	-	6.8e-11	42.6	0.8	7.2e-09	36.0	0.5	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|289597041|ref|YP_003483737.1|	-	2.8e-09	36.5	0.3	0.002	17.2	0.0	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|289597041|ref|YP_003483737.1|	-	4e-08	32.7	0.0	5.5e-08	32.3	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|289597041|ref|YP_003483737.1|	-	2.1e-05	23.9	0.0	3.9e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|289597041|ref|YP_003483737.1|	-	0.00096	18.6	0.0	0.0056	16.1	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|289597041|ref|YP_003483737.1|	-	0.001	19.4	0.3	0.002	18.4	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|289597041|ref|YP_003483737.1|	-	0.0096	15.1	0.0	0.014	14.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_13	PF13166.1	gi|289597041|ref|YP_003483737.1|	-	0.012	14.1	0.1	1.6	7.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|289597041|ref|YP_003483737.1|	-	0.038	13.6	0.1	0.07	12.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|289597041|ref|YP_003483737.1|	-	0.044	13.7	0.0	0.086	12.8	0.0	1.5	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|289597041|ref|YP_003483737.1|	-	0.077	13.1	0.1	0.1	12.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|289597041|ref|YP_003483737.1|	-	0.11	12.8	1.0	0.9	9.8	0.7	2.2	1	1	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.15	gi|289597041|ref|YP_003483737.1|	-	0.12	12.0	0.0	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_5	PF07728.9	gi|289597041|ref|YP_003483737.1|	-	0.15	11.8	0.1	0.54	9.9	0.0	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
CbiQ	PF02361.11	gi|289597042|ref|YP_003483738.1|	-	2.6e-32	112.2	18.0	2.6e-32	112.2	12.5	1.4	2	0	0	2	2	2	1	Cobalt	transport	protein
BCHF	PF07284.6	gi|289597042|ref|YP_003483738.1|	-	0.43	10.4	8.9	0.3	10.9	4.0	2.3	1	1	0	1	1	1	0	2-vinyl	bacteriochlorophyllide	hydratase	(BCHF)
CD34_antigen	PF06365.7	gi|289597042|ref|YP_003483738.1|	-	0.71	9.4	2.2	0.82	9.2	0.7	1.7	2	0	0	2	2	2	0	CD34/Podocalyxin	family
PDGLE	PF13190.1	gi|289597043|ref|YP_003483739.1|	-	4.2e-08	32.7	1.0	8.2e-08	31.8	0.7	1.5	1	1	0	1	1	1	1	PDGLE	domain
7TM_GPCR_Sri	PF10327.4	gi|289597043|ref|YP_003483739.1|	-	0.0071	15.3	0.0	0.0076	15.2	0.0	1.0	1	0	0	1	1	1	1	Serpentine	type	7TM	GPCR	chemoreceptor	Sri
PepSY_TM_2	PF13703.1	gi|289597043|ref|YP_003483739.1|	-	0.015	15.4	1.4	0.42	10.8	0.1	2.1	2	0	0	2	2	2	0	PepSY-associated	TM	helix
EI24	PF07264.6	gi|289597043|ref|YP_003483739.1|	-	0.027	13.9	0.5	0.032	13.6	0.3	1.1	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
DUF3671	PF12420.3	gi|289597043|ref|YP_003483739.1|	-	0.033	14.1	0.1	0.04	13.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function
DUF3309	PF11752.3	gi|289597043|ref|YP_003483739.1|	-	0.071	12.9	7.7	0.39	10.5	1.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3309)
Peptidase_M50B	PF13398.1	gi|289597043|ref|YP_003483739.1|	-	0.12	11.7	3.5	0.51	9.7	0.4	2.1	1	1	1	2	2	2	0	Peptidase	M50B-like
ABC2_membrane_4	PF12730.2	gi|289597043|ref|YP_003483739.1|	-	0.13	11.4	4.3	0.21	10.7	3.0	1.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
CbiM	PF01891.11	gi|289597044|ref|YP_003483740.1|	-	1.2e-65	220.9	13.7	1.4e-65	220.7	9.5	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
DUF3816	PF12822.2	gi|289597044|ref|YP_003483740.1|	-	2.5e-07	30.7	14.9	2.5e-07	30.7	10.3	2.4	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF3816)
5TM-5TMR_LYT	PF07694.7	gi|289597044|ref|YP_003483740.1|	-	0.003	16.9	13.2	0.0031	16.8	8.5	1.6	1	1	0	1	1	1	1	5TMR	of	5TMR-LYT
DUF1129	PF06570.6	gi|289597044|ref|YP_003483740.1|	-	9.6	5.4	11.6	0.69	9.1	1.3	2.6	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
NikR_C	PF08753.6	gi|289597045|ref|YP_003483741.1|	-	8e-28	96.1	4.0	1.1e-27	95.7	2.8	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.16	gi|289597045|ref|YP_003483741.1|	-	2.6e-08	33.4	0.4	1e-07	31.5	0.1	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
NTF-like	PF14540.1	gi|289597045|ref|YP_003483741.1|	-	0.024	14.2	1.0	0.032	13.8	0.7	1.2	1	0	0	1	1	1	0	Nucleotidyltransferase-like
Metallophos_2	PF12850.2	gi|289597046|ref|YP_003483742.1|	-	6.2e-19	68.3	0.0	8.3e-19	67.9	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|289597046|ref|YP_003483742.1|	-	4.4e-16	58.7	0.2	2.4e-13	49.8	0.1	2.7	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.23	gi|289597046|ref|YP_003483742.1|	-	1.4e-13	50.7	4.3	3.6e-13	49.3	3.0	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
UPF0547	PF10571.4	gi|289597047|ref|YP_003483743.1|	-	3.6e-06	26.5	1.0	6.3e-06	25.7	0.7	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|289597047|ref|YP_003483743.1|	-	4.7e-06	25.6	1.7	7.6e-06	24.9	1.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-tcix	PF14952.1	gi|289597047|ref|YP_003483743.1|	-	8.3e-05	21.8	0.9	0.00016	20.8	0.6	1.4	1	0	0	1	1	1	1	Putative	treble-clef,	zinc-finger,	Zn-binding
DZR	PF12773.2	gi|289597047|ref|YP_003483743.1|	-	0.00016	21.4	0.9	0.00031	20.5	0.6	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|289597047|ref|YP_003483743.1|	-	0.00043	19.6	2.4	0.00094	18.5	1.6	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
DUF3552	PF12072.3	gi|289597047|ref|YP_003483743.1|	-	0.00043	19.5	41.1	0.0028	16.8	12.3	3.2	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF3552)
DUF3450	PF11932.3	gi|289597047|ref|YP_003483743.1|	-	0.0015	17.8	2.1	0.0015	17.8	1.5	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3450)
Spectrin	PF00435.16	gi|289597047|ref|YP_003483743.1|	-	0.0036	17.5	10.9	0.0036	17.5	7.6	2.5	1	1	2	3	3	3	1	Spectrin	repeat
DUF3287	PF11690.3	gi|289597047|ref|YP_003483743.1|	-	0.0038	17.2	11.2	0.1	12.6	1.3	2.5	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3287)
DNA_RNApol_7kD	PF03604.8	gi|289597047|ref|YP_003483743.1|	-	0.011	15.1	2.0	0.61	9.6	1.8	2.4	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mu-like_Com	PF10122.4	gi|289597047|ref|YP_003483743.1|	-	0.012	14.6	0.1	0.035	13.1	0.1	1.8	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
Baculo_PEP_C	PF04513.7	gi|289597047|ref|YP_003483743.1|	-	0.014	15.2	6.8	1.7	8.4	4.7	2.1	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Tropomyosin	PF00261.15	gi|289597047|ref|YP_003483743.1|	-	0.016	14.3	36.8	0.021	13.9	25.5	1.1	1	0	0	1	1	1	0	Tropomyosin
NPV_P10	PF05531.7	gi|289597047|ref|YP_003483743.1|	-	0.039	14.2	6.7	3.7	7.8	0.7	2.9	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
V_ATPase_I	PF01496.14	gi|289597047|ref|YP_003483743.1|	-	0.046	11.5	21.0	0.077	10.8	14.6	1.4	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Muted	PF14942.1	gi|289597047|ref|YP_003483743.1|	-	0.051	13.4	25.3	0.04	13.7	9.7	2.8	2	1	0	2	2	2	0	Organelle	biogenesis,	Muted-like	protein
IFT57	PF10498.4	gi|289597047|ref|YP_003483743.1|	-	0.059	12.1	28.1	0.1	11.3	11.1	2.1	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
Spc7	PF08317.6	gi|289597047|ref|YP_003483743.1|	-	0.068	11.8	33.7	0.27	9.8	11.1	2.0	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Rubredoxin	PF00301.15	gi|289597047|ref|YP_003483743.1|	-	0.1	12.4	0.9	5.9	6.8	0.2	2.5	2	0	0	2	2	2	0	Rubredoxin
Nckap1	PF09735.4	gi|289597047|ref|YP_003483743.1|	-	0.12	9.8	3.9	0.041	11.3	1.0	1.3	1	1	0	1	1	1	0	Membrane-associated	apoptosis	protein
ERM	PF00769.14	gi|289597047|ref|YP_003483743.1|	-	0.13	11.7	31.5	0.35	10.3	21.8	1.6	1	1	0	1	1	1	0	Ezrin/radixin/moesin	family
TPR_MLP1_2	PF07926.7	gi|289597047|ref|YP_003483743.1|	-	0.13	11.9	38.5	0.75	9.5	17.4	3.0	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
Nup54	PF13874.1	gi|289597047|ref|YP_003483743.1|	-	0.14	11.7	16.4	0.043	13.4	6.5	2.2	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
Prok-RING_1	PF14446.1	gi|289597047|ref|YP_003483743.1|	-	0.21	11.3	1.8	0.5	10.1	1.1	1.7	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF3584	PF12128.3	gi|289597047|ref|YP_003483743.1|	-	0.25	8.6	22.2	0.32	8.2	15.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Zn-ribbon_8	PF09723.5	gi|289597047|ref|YP_003483743.1|	-	0.26	11.2	2.1	0.66	9.9	0.1	2.4	1	1	0	2	2	2	0	Zinc	ribbon	domain
TMCO5	PF14992.1	gi|289597047|ref|YP_003483743.1|	-	0.32	10.0	30.4	0.42	9.6	21.1	1.1	1	0	0	1	1	1	0	TMCO5	family
zinc_ribbon_5	PF13719.1	gi|289597047|ref|YP_003483743.1|	-	0.41	10.2	2.1	12	5.5	0.1	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
Dus	PF01207.12	gi|289597047|ref|YP_003483743.1|	-	0.45	9.2	4.9	0.13	11.0	1.1	1.7	1	1	1	2	2	2	0	Dihydrouridine	synthase	(Dus)
GAGA_bind	PF06217.7	gi|289597047|ref|YP_003483743.1|	-	0.66	9.8	9.5	1	9.2	6.6	1.3	1	0	0	1	1	1	0	GAGA	binding	protein-like	family
Sec34	PF04136.10	gi|289597047|ref|YP_003483743.1|	-	0.69	9.6	11.1	8.1	6.1	0.1	2.3	1	1	1	2	2	2	0	Sec34-like	family
AAA_13	PF13166.1	gi|289597047|ref|YP_003483743.1|	-	0.77	8.1	31.3	1.5	7.2	6.7	1.9	1	1	0	1	1	1	0	AAA	domain
Erythro_esteras	PF05139.9	gi|289597047|ref|YP_003483743.1|	-	0.93	8.6	6.8	1.2	8.2	4.7	1.2	1	0	0	1	1	1	0	Erythromycin	esterase
DUF789	PF05623.7	gi|289597047|ref|YP_003483743.1|	-	1.1	8.6	4.2	1.7	8.0	2.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF789)
HlyD	PF00529.15	gi|289597047|ref|YP_003483743.1|	-	2.2	7.4	13.1	2.8	7.1	9.1	1.1	1	0	0	1	1	1	0	HlyD	family	secretion	protein
CALCOCO1	PF07888.6	gi|289597047|ref|YP_003483743.1|	-	2.3	6.4	20.2	3.2	5.9	14.0	1.3	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
IncA	PF04156.9	gi|289597047|ref|YP_003483743.1|	-	2.6	7.5	28.0	48	3.4	19.6	2.2	1	1	0	1	1	1	0	IncA	protein
OrfB_Zn_ribbon	PF07282.6	gi|289597047|ref|YP_003483743.1|	-	4.3	7.0	6.8	0.96	9.1	0.7	2.7	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF1664	PF07889.7	gi|289597047|ref|YP_003483743.1|	-	5.2	6.8	12.9	1.1	9.0	2.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF812	PF05667.6	gi|289597047|ref|YP_003483743.1|	-	6	5.2	24.0	9.7	4.5	16.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
SDH_alpha	PF03313.10	gi|289597047|ref|YP_003483743.1|	-	6.1	5.7	7.3	0.54	9.2	1.2	1.8	1	1	1	2	2	2	0	Serine	dehydratase	alpha	chain
DUF479	PF04336.7	gi|289597047|ref|YP_003483743.1|	-	7.4	6.7	7.1	43	4.2	0.7	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function,	DUF479
TerY-C	PF15616.1	gi|289597047|ref|YP_003483743.1|	-	7.5	6.4	12.3	0.27	11.1	0.3	2.8	2	1	1	3	3	3	0	TerY-C	metal	binding	domain
GAS	PF13851.1	gi|289597047|ref|YP_003483743.1|	-	8.1	5.5	41.3	0.2	10.8	21.8	2.0	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
UvrD-helicase	PF00580.16	gi|289597047|ref|YP_003483743.1|	-	9.4	5.4	15.0	11	5.1	10.4	1.1	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
HemX	PF04375.9	gi|289597047|ref|YP_003483743.1|	-	9.4	4.7	12.1	22	3.4	6.3	2.1	1	1	1	2	2	2	0	HemX
THRAP3_BCLAF1	PF15440.1	gi|289597047|ref|YP_003483743.1|	-	9.9	4.6	21.7	13	4.2	15.0	1.1	1	0	0	1	1	1	0	THRAP3/BCLAF1	family
DUF137	PF02006.11	gi|289597048|ref|YP_003483744.1|	-	1.1e-69	233.3	3.1	1.4e-69	233.0	2.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
Ribosomal_L17	PF01196.14	gi|289597048|ref|YP_003483744.1|	-	0.24	11.9	2.0	0.58	10.7	0.2	2.3	2	1	1	3	3	3	0	Ribosomal	protein	L17
Snf7	PF03357.16	gi|289597048|ref|YP_003483744.1|	-	0.39	10.0	3.4	0.48	9.7	1.1	1.9	1	1	0	1	1	1	0	Snf7
DHHA1	PF02272.14	gi|289597049|ref|YP_003483745.1|	-	1.7e-15	56.4	0.8	5.1e-15	54.9	0.3	2.0	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.15	gi|289597049|ref|YP_003483745.1|	-	1.2e-11	44.4	0.6	2.3e-11	43.5	0.4	1.4	1	0	0	1	1	1	1	DHH	family
Ribosomal_S13_N	PF08069.7	gi|289597050|ref|YP_003483746.1|	-	2.4e-24	84.9	0.7	2.4e-24	84.9	0.5	2.0	3	0	0	3	3	3	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|289597050|ref|YP_003483746.1|	-	4.8e-19	67.9	0.0	6.6e-19	67.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
DDE_Tnp_1	PF01609.16	gi|289597051|ref|YP_003483747.1|	-	5.4e-14	52.2	0.0	9.9e-14	51.3	0.0	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|289597051|ref|YP_003483747.1|	-	0.011	15.4	0.0	0.021	14.5	0.0	1.5	1	0	0	1	1	1	0	Transposase	DDE	domain
DUF429	PF04250.8	gi|289597052|ref|YP_003483748.1|	-	1.8e-10	40.4	0.1	2e-10	40.2	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
SMC_N	PF02463.14	gi|289597054|ref|YP_003483750.1|	-	2.8e-52	177.1	65.6	7.2e-51	172.5	45.5	3.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SMC_hinge	PF06470.8	gi|289597054|ref|YP_003483750.1|	-	5.2e-31	107.1	0.0	1.9e-30	105.2	0.0	2.1	1	0	0	1	1	1	1	SMC	proteins	Flexible	Hinge	Domain
AAA_23	PF13476.1	gi|289597054|ref|YP_003483750.1|	-	1e-20	74.9	12.7	1e-20	74.9	8.8	8.2	2	2	2	4	4	2	1	AAA	domain
IncA	PF04156.9	gi|289597054|ref|YP_003483750.1|	-	9.1e-12	44.9	135.3	0.0012	18.4	10.6	7.6	3	2	4	7	7	7	5	IncA	protein
AAA_29	PF13555.1	gi|289597054|ref|YP_003483750.1|	-	6.3e-09	35.2	0.0	1.1e-08	34.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Reo_sigmaC	PF04582.7	gi|289597054|ref|YP_003483750.1|	-	1.8e-08	33.9	21.8	0.00031	20.0	2.0	5.5	3	2	3	6	6	6	4	Reovirus	sigma	C	capsid	protein
Baculo_PEP_C	PF04513.7	gi|289597054|ref|YP_003483750.1|	-	4.5e-08	33.0	32.4	0.006	16.4	0.1	7.1	4	2	2	6	6	6	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MscS_porin	PF12795.2	gi|289597054|ref|YP_003483750.1|	-	1.4e-05	24.5	90.3	0.00046	19.5	14.5	6.3	4	2	3	7	7	7	3	Mechanosensitive	ion	channel	porin	domain
AAA_13	PF13166.1	gi|289597054|ref|YP_003483750.1|	-	3e-05	22.7	148.3	0.19	10.1	13.9	6.9	3	2	3	6	6	6	6	AAA	domain
Spc7	PF08317.6	gi|289597054|ref|YP_003483750.1|	-	5.3e-05	22.0	19.7	5.3e-05	22.0	13.7	8.0	2	2	6	8	8	7	3	Spc7	kinetochore	protein
AAA_21	PF13304.1	gi|289597054|ref|YP_003483750.1|	-	0.00051	20.0	7.9	0.00051	20.0	5.5	5.8	2	2	2	4	4	2	2	AAA	domain
Myosin_tail_1	PF01576.14	gi|289597054|ref|YP_003483750.1|	-	0.0011	16.8	49.3	0.0011	16.8	34.2	4.4	2	2	1	3	3	3	1	Myosin	tail
TMF_DNA_bd	PF12329.3	gi|289597054|ref|YP_003483750.1|	-	0.0025	17.6	14.8	0.0025	17.6	10.3	13.7	5	3	7	13	13	13	2	TATA	element	modulatory	factor	1	DNA	binding
DUF342	PF03961.8	gi|289597054|ref|YP_003483750.1|	-	0.0027	16.2	10.1	0.0027	16.2	7.0	8.1	2	2	6	8	8	8	4	Protein	of	unknown	function	(DUF342)
HALZ	PF02183.13	gi|289597054|ref|YP_003483750.1|	-	0.0045	16.6	9.5	0.0045	16.6	6.6	10.3	10	4	2	12	12	11	1	Homeobox	associated	leucine	zipper
ABC_tran	PF00005.22	gi|289597054|ref|YP_003483750.1|	-	0.16	12.3	0.0	0.16	12.3	0.0	6.9	3	2	0	3	3	1	0	ABC	transporter
APG6	PF04111.7	gi|289597054|ref|YP_003483750.1|	-	0.3	10.0	151.0	0.52	9.3	17.0	7.4	2	2	4	7	7	7	0	Autophagy	protein	Apg6
GAS	PF13851.1	gi|289597054|ref|YP_003483750.1|	-	2.3	7.3	174.9	0.28	10.3	6.6	8.5	2	2	5	8	8	8	0	Growth-arrest	specific	micro-tubule	binding
ScpA_ScpB	PF02616.9	gi|289597055|ref|YP_003483751.1|	-	7.1e-20	71.6	10.5	9.2e-20	71.2	7.3	1.1	1	0	0	1	1	1	1	ScpA/B	protein
Rad21_Rec8	PF04824.11	gi|289597055|ref|YP_003483751.1|	-	0.0068	15.5	1.1	0.012	14.8	0.1	1.9	2	0	0	2	2	2	1	Conserved	region	of	Rad21	/	Rec8	like	protein
RNA_pol_L_2	PF13656.1	gi|289597056|ref|YP_003483752.1|	-	2.5e-21	74.8	0.2	2.5e-21	74.8	0.2	1.4	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|289597056|ref|YP_003483752.1|	-	0.087	11.9	0.1	0.14	11.2	0.1	1.7	1	1	0	1	1	1	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
DUF2229	PF09989.4	gi|289597056|ref|YP_003483752.1|	-	0.16	11.4	0.7	0.18	11.2	0.5	1.1	1	0	0	1	1	1	0	CoA	enzyme	activase	uncharacterised	domain	(DUF2229)
AAA	PF00004.24	gi|289597057|ref|YP_003483753.1|	-	2.3e-43	147.5	0.0	4.1e-43	146.7	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|289597057|ref|YP_003483753.1|	-	6.9e-08	32.5	0.0	1.8e-06	27.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|289597057|ref|YP_003483753.1|	-	1.6e-06	27.3	0.3	7.3e-06	25.1	0.1	2.1	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|289597057|ref|YP_003483753.1|	-	4.1e-06	26.5	2.6	2.5e-05	24.0	0.2	3.0	2	2	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|289597057|ref|YP_003483753.1|	-	1e-05	25.5	1.7	3.1e-05	24.0	0.2	2.5	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|289597057|ref|YP_003483753.1|	-	3.4e-05	23.4	0.3	8.6e-05	22.2	0.2	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|289597057|ref|YP_003483753.1|	-	6.9e-05	22.7	0.1	0.00078	19.3	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|289597057|ref|YP_003483753.1|	-	0.00011	22.3	0.8	0.0045	17.1	0.2	2.7	2	1	0	2	2	1	1	AAA	domain
AAA_28	PF13521.1	gi|289597057|ref|YP_003483753.1|	-	0.00023	21.1	0.0	0.00058	19.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|289597057|ref|YP_003483753.1|	-	0.00032	19.5	0.0	0.0023	16.6	0.0	2.1	2	0	0	2	2	2	1	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|289597057|ref|YP_003483753.1|	-	0.00035	19.7	0.0	0.00074	18.6	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
DUF815	PF05673.8	gi|289597057|ref|YP_003483753.1|	-	0.00055	18.9	0.0	0.0013	17.7	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
IstB_IS21	PF01695.12	gi|289597057|ref|YP_003483753.1|	-	0.00056	19.3	0.1	0.0012	18.2	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_17	PF13207.1	gi|289597057|ref|YP_003483753.1|	-	0.00075	20.3	3.8	0.0045	17.7	0.7	3.1	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|289597057|ref|YP_003483753.1|	-	0.0018	18.5	0.0	0.0053	17.0	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|289597057|ref|YP_003483753.1|	-	0.0024	17.7	0.0	0.0077	16.1	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|289597057|ref|YP_003483753.1|	-	0.0031	16.9	3.7	0.043	13.1	0.2	3.0	2	1	1	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.16	gi|289597057|ref|YP_003483753.1|	-	0.0067	15.6	0.1	0.021	14.0	0.1	1.7	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
KaiC	PF06745.8	gi|289597057|ref|YP_003483753.1|	-	0.009	15.1	2.5	0.12	11.5	0.0	2.7	2	1	1	3	3	3	1	KaiC
Sigma54_activ_2	PF14532.1	gi|289597057|ref|YP_003483753.1|	-	0.012	15.6	0.0	0.045	13.8	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
PhoH	PF02562.11	gi|289597057|ref|YP_003483753.1|	-	0.021	14.0	0.0	0.036	13.2	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|289597057|ref|YP_003483753.1|	-	0.022	14.2	0.3	0.16	11.4	0.0	2.3	2	1	0	2	2	2	0	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|289597057|ref|YP_003483753.1|	-	0.026	14.1	0.0	0.054	13.0	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|289597057|ref|YP_003483753.1|	-	0.028	14.6	0.0	0.075	13.2	0.0	1.7	2	0	0	2	2	1	0	RNA	helicase
DivIC	PF04977.10	gi|289597057|ref|YP_003483753.1|	-	0.087	12.3	0.5	0.36	10.3	0.1	2.3	2	0	0	2	2	2	0	Septum	formation	initiator
Prefoldin_2	PF01920.15	gi|289597057|ref|YP_003483753.1|	-	0.12	12.1	1.8	0.29	10.9	0.4	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
NACHT	PF05729.7	gi|289597057|ref|YP_003483753.1|	-	0.12	12.0	0.2	0.62	9.7	0.0	2.0	1	1	1	2	2	2	0	NACHT	domain
TBPIP	PF07106.8	gi|289597057|ref|YP_003483753.1|	-	0.14	11.6	0.4	0.45	10.0	0.1	1.9	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
EFhand_Ca_insen	PF08726.5	gi|289597057|ref|YP_003483753.1|	-	0.14	12.1	0.1	1.6	8.7	0.0	2.4	2	0	0	2	2	2	0	Ca2+	insensitive	EF	hand
ABC_tran	PF00005.22	gi|289597057|ref|YP_003483753.1|	-	0.15	12.3	0.0	0.68	10.2	0.0	2.1	1	0	0	1	1	1	0	ABC	transporter
AAA_30	PF13604.1	gi|289597057|ref|YP_003483753.1|	-	0.17	11.4	0.1	0.33	10.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
Prefoldin	PF02996.12	gi|289597057|ref|YP_003483753.1|	-	0.31	10.6	1.4	0.61	9.7	0.4	1.8	2	0	0	2	2	1	0	Prefoldin	subunit
DUF87	PF01935.12	gi|289597058|ref|YP_003483754.1|	-	1.9e-37	129.2	0.2	3.4e-37	128.4	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|289597058|ref|YP_003483754.1|	-	5.1e-27	95.1	0.0	6.6e-27	94.7	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|289597058|ref|YP_003483754.1|	-	5.9e-08	31.5	0.0	0.0026	16.1	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|289597058|ref|YP_003483754.1|	-	9.5e-07	27.7	0.0	0.00022	19.9	0.0	2.3	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|289597058|ref|YP_003483754.1|	-	4e-06	26.4	0.0	0.015	14.7	0.0	2.2	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
HAS-barrel	PF09378.5	gi|289597058|ref|YP_003483754.1|	-	0.00011	22.0	2.0	0.00032	20.5	1.4	1.8	1	0	0	1	1	1	1	HAS	barrel	domain
T4SS-DNA_transf	PF02534.9	gi|289597058|ref|YP_003483754.1|	-	0.002	16.8	0.0	0.0027	16.3	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
Zot	PF05707.7	gi|289597058|ref|YP_003483754.1|	-	0.011	15.2	0.0	0.03	13.8	0.0	1.7	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DUF357	PF04010.8	gi|289597059|ref|YP_003483755.1|	-	1.8e-28	97.9	0.6	2.1e-28	97.7	0.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
Sulfolobus_pRN	PF05584.6	gi|289597061|ref|YP_003483757.1|	-	0.019	14.9	0.2	0.033	14.1	0.1	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
GATase_2	PF00310.16	gi|289597062|ref|YP_003483758.1|	-	6.7e-24	84.2	0.0	1.8e-19	69.6	0.0	2.9	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|289597062|ref|YP_003483758.1|	-	1.9e-23	82.5	0.0	2.9e-23	81.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|289597062|ref|YP_003483758.1|	-	1e-22	80.5	0.0	1.6e-22	79.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|289597062|ref|YP_003483758.1|	-	9.1e-17	60.9	1.7	1.5e-16	60.2	0.1	2.1	3	0	0	3	3	3	1	Phosphoribosyl	transferase	domain
GATase_4	PF13230.1	gi|289597062|ref|YP_003483758.1|	-	1.4e-07	30.4	0.0	2e-07	29.9	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.1	gi|289597062|ref|YP_003483758.1|	-	0.011	15.0	0.0	0.021	14.1	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Ribosomal_L37e	PF01907.14	gi|289597063|ref|YP_003483759.1|	-	7.2e-23	80.1	13.0	7.8e-23	80.0	9.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|289597063|ref|YP_003483759.1|	-	0.00043	20.0	1.3	0.00056	19.6	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|289597063|ref|YP_003483759.1|	-	0.013	14.7	4.5	0.064	12.4	3.0	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|289597063|ref|YP_003483759.1|	-	0.014	14.8	5.1	0.047	13.1	3.7	1.7	1	1	1	2	2	2	0	zinc-ribbon	domain
SelR	PF01641.13	gi|289597063|ref|YP_003483759.1|	-	0.015	15.0	0.1	0.015	14.9	0.1	1.1	1	0	0	1	1	1	0	SelR	domain
HypA	PF01155.14	gi|289597063|ref|YP_003483759.1|	-	0.015	14.9	0.7	0.015	14.9	0.5	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
UPF0547	PF10571.4	gi|289597063|ref|YP_003483759.1|	-	0.021	14.5	8.7	0.042	13.5	0.8	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
IGFL	PF14653.1	gi|289597063|ref|YP_003483759.1|	-	0.061	13.3	3.2	0.068	13.1	2.2	1.2	1	0	0	1	1	1	0	Insulin	growth	factor-like	family
Zn_Tnp_IS1595	PF12760.2	gi|289597063|ref|YP_003483759.1|	-	0.071	12.9	8.3	0.11	12.2	5.5	1.5	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|289597063|ref|YP_003483759.1|	-	0.095	12.2	4.8	2.7	7.5	0.3	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|289597063|ref|YP_003483759.1|	-	0.11	12.4	2.3	5.8	6.9	0.1	2.1	1	1	2	3	3	3	0	Zinc	ribbon	domain
zinc_ribbon_6	PF14599.1	gi|289597063|ref|YP_003483759.1|	-	0.14	11.9	1.3	0.17	11.7	0.9	1.3	1	0	0	1	1	1	0	Zinc-ribbon
DnaJ_CXXCXGXG	PF00684.14	gi|289597063|ref|YP_003483759.1|	-	0.23	11.5	3.9	0.3	11.1	2.7	1.2	1	0	0	1	1	1	0	DnaJ	central	domain
OrfB_Zn_ribbon	PF07282.6	gi|289597063|ref|YP_003483759.1|	-	0.29	10.8	5.8	0.96	9.1	3.9	1.8	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
YhfH	PF14149.1	gi|289597063|ref|YP_003483759.1|	-	0.57	10.0	3.6	1	9.1	0.2	2.1	1	1	1	2	2	2	0	YhfH-like	protein
zf-ZPR1	PF03367.8	gi|289597063|ref|YP_003483759.1|	-	0.65	9.1	2.8	3.6	6.7	0.3	2.0	1	1	1	2	2	2	0	ZPR1	zinc-finger	domain
DNA_RNApol_7kD	PF03604.8	gi|289597063|ref|YP_003483759.1|	-	1.5	8.3	10.0	2.7	7.5	1.3	2.0	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-Mss51	PF13824.1	gi|289597063|ref|YP_003483759.1|	-	1.7	8.5	5.2	3	7.7	0.2	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
RNA_POL_M_15KD	PF02150.11	gi|289597063|ref|YP_003483759.1|	-	3.8	7.2	5.6	6	6.6	0.3	2.1	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Zn_ribbon_recom	PF13408.1	gi|289597063|ref|YP_003483759.1|	-	3.8	7.8	13.4	71	3.7	7.4	2.5	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
LSM	PF01423.17	gi|289597064|ref|YP_003483760.1|	-	7.4e-20	70.2	0.9	8.4e-20	70.0	0.7	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|289597064|ref|YP_003483760.1|	-	0.0041	17.0	0.1	0.0047	16.8	0.1	1.1	1	0	0	1	1	1	1	Ataxin	2	SM	domain
DsbC_N	PF10411.4	gi|289597064|ref|YP_003483760.1|	-	0.09	12.0	0.1	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	Disulfide	bond	isomerase	protein	N-terminus
MFS_1	PF07690.11	gi|289597065|ref|YP_003483761.1|	-	5.9e-27	94.3	51.9	3.3e-22	78.7	27.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
ATG22	PF11700.3	gi|289597065|ref|YP_003483761.1|	-	2.4	6.5	31.8	0.19	10.1	1.5	3.5	2	1	1	3	3	3	0	Vacuole	effluxer	Atg22	like
dCMP_cyt_deam_1	PF00383.17	gi|289597066|ref|YP_003483762.1|	-	2.3e-17	62.5	3.5	2.7e-17	62.2	2.4	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
dCMP_cyt_deam_2	PF08211.6	gi|289597066|ref|YP_003483762.1|	-	4.4e-10	39.6	0.2	6.9e-10	39.0	0.1	1.3	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
LmjF365940-deam	PF14421.1	gi|289597066|ref|YP_003483762.1|	-	1	8.7	3.9	1.4	8.2	0.1	2.1	1	1	1	2	2	2	0	A	distinct	subfamily	of	CDD/CDA-like	deaminases
AAA_32	PF13654.1	gi|289597067|ref|YP_003483763.1|	-	2.3e-16	59.5	0.0	1.2e-11	43.9	0.1	2.9	2	1	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|289597067|ref|YP_003483763.1|	-	1.7e-15	56.7	0.1	1.2e-09	37.6	0.0	2.3	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|289597067|ref|YP_003483763.1|	-	1.9e-11	43.7	0.0	1.2e-05	24.8	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_5	PF07728.9	gi|289597067|ref|YP_003483763.1|	-	1.7e-09	37.5	0.0	0.00011	21.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.18	gi|289597067|ref|YP_003483763.1|	-	3.8e-08	32.5	0.0	0.024	13.4	0.0	3.1	3	0	0	3	3	3	2	MCM2/3/5	family
AAA	PF00004.24	gi|289597067|ref|YP_003483763.1|	-	5.3e-08	33.1	0.0	0.0001	22.5	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|289597067|ref|YP_003483763.1|	-	2.3e-07	30.9	0.0	0.00021	21.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|289597067|ref|YP_003483763.1|	-	6e-07	28.7	0.1	0.0029	16.7	0.0	2.3	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|289597067|ref|YP_003483763.1|	-	6.8e-05	23.6	0.0	0.00042	21.1	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289597067|ref|YP_003483763.1|	-	0.00022	21.2	0.0	0.0015	18.5	0.0	2.0	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_25	PF13481.1	gi|289597067|ref|YP_003483763.1|	-	0.00031	20.1	0.0	0.0012	18.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|289597067|ref|YP_003483763.1|	-	0.0005	19.5	0.0	0.00087	18.7	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|289597067|ref|YP_003483763.1|	-	0.00059	19.5	0.0	0.0012	18.5	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|289597067|ref|YP_003483763.1|	-	0.00062	20.0	0.0	0.0013	19.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|289597067|ref|YP_003483763.1|	-	0.00071	19.6	0.0	0.0033	17.4	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|289597067|ref|YP_003483763.1|	-	0.0028	17.1	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
zf-ribbon_3	PF13248.1	gi|289597067|ref|YP_003483763.1|	-	0.0031	16.6	8.9	0.0061	15.7	6.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
ABC_tran	PF00005.22	gi|289597067|ref|YP_003483763.1|	-	0.0036	17.6	0.0	0.0075	16.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
Rad17	PF03215.10	gi|289597067|ref|YP_003483763.1|	-	0.0041	15.8	0.0	0.0075	14.9	0.0	1.4	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_3	PF07726.6	gi|289597067|ref|YP_003483763.1|	-	0.0044	16.6	0.0	0.78	9.3	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DZR	PF12773.2	gi|289597067|ref|YP_003483763.1|	-	0.0047	16.7	1.8	0.0091	15.7	1.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
AAA_14	PF13173.1	gi|289597067|ref|YP_003483763.1|	-	0.0061	16.4	0.0	2.9	7.7	0.0	3.0	2	1	1	3	3	3	1	AAA	domain
ResIII	PF04851.10	gi|289597067|ref|YP_003483763.1|	-	0.015	15.1	0.0	0.054	13.3	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|289597067|ref|YP_003483763.1|	-	0.015	14.5	0.0	0.027	13.6	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
zinc_ribbon_2	PF13240.1	gi|289597067|ref|YP_003483763.1|	-	0.016	14.6	6.1	0.032	13.7	4.2	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
AAA_33	PF13671.1	gi|289597067|ref|YP_003483763.1|	-	0.016	15.0	0.0	0.034	14.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289597067|ref|YP_003483763.1|	-	0.018	14.4	0.0	0.03	13.7	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
TIP49	PF06068.8	gi|289597067|ref|YP_003483763.1|	-	0.023	13.4	0.1	0.13	10.9	0.0	2.0	2	0	0	2	2	2	0	TIP49	C-terminus
AAA_PrkA	PF08298.6	gi|289597067|ref|YP_003483763.1|	-	0.027	13.1	0.0	0.21	10.2	0.0	2.0	2	0	0	2	2	2	0	PrkA	AAA	domain
AAA_30	PF13604.1	gi|289597067|ref|YP_003483763.1|	-	0.029	13.9	0.0	0.053	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Zn-ribbon_8	PF09723.5	gi|289597067|ref|YP_003483763.1|	-	0.033	14.1	3.1	0.092	12.7	2.1	1.8	1	0	0	1	1	1	0	Zinc	ribbon	domain
AAA_29	PF13555.1	gi|289597067|ref|YP_003483763.1|	-	0.045	13.2	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.1	gi|289597067|ref|YP_003483763.1|	-	0.048	13.6	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|289597067|ref|YP_003483763.1|	-	0.06	13.5	0.0	0.2	11.8	0.0	1.9	1	0	0	1	1	1	0	RNA	helicase
KTI12	PF08433.5	gi|289597067|ref|YP_003483763.1|	-	0.063	12.4	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|289597067|ref|YP_003483763.1|	-	0.065	12.3	0.0	0.13	11.3	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
NACHT	PF05729.7	gi|289597067|ref|YP_003483763.1|	-	0.068	12.8	0.0	0.15	11.7	0.0	1.5	2	0	0	2	2	1	0	NACHT	domain
DUF35_N	PF12172.3	gi|289597067|ref|YP_003483763.1|	-	0.068	13.0	2.7	0.14	12.1	1.9	1.4	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
FumaraseC_C	PF10415.4	gi|289597067|ref|YP_003483763.1|	-	0.085	12.9	0.0	0.22	11.5	0.0	1.7	1	0	0	1	1	1	0	Fumarase	C	C-terminus
Parvo_NS1	PF01057.12	gi|289597067|ref|YP_003483763.1|	-	0.15	10.9	0.0	0.26	10.1	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
DUF258	PF03193.11	gi|289597067|ref|YP_003483763.1|	-	0.17	11.1	0.0	0.3	10.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
zf-tcix	PF14952.1	gi|289597067|ref|YP_003483763.1|	-	2.5	7.5	4.9	5.6	6.3	0.1	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Zn_Tnp_IS1595	PF12760.2	gi|289597067|ref|YP_003483763.1|	-	3.2	7.6	5.9	1.6	8.5	0.4	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Toprim_4	PF13662.1	gi|289597068|ref|YP_003483764.1|	-	9.8e-09	35.1	0.7	4e-08	33.1	0.1	2.3	2	1	0	2	2	2	1	Toprim	domain
Toprim	PF01751.17	gi|289597068|ref|YP_003483764.1|	-	0.0016	18.4	0.3	0.0016	18.4	0.2	3.3	3	1	0	3	3	3	1	Toprim	domain
CARD	PF00619.16	gi|289597068|ref|YP_003483764.1|	-	0.019	14.7	0.2	0.084	12.7	0.2	2.1	1	0	0	1	1	1	0	Caspase	recruitment	domain
Radical_SAM	PF04055.16	gi|289597068|ref|YP_003483764.1|	-	0.29	11.2	2.8	0.48	10.5	0.2	2.5	2	1	1	3	3	3	0	Radical	SAM	superfamily
CDV3	PF15359.1	gi|289597068|ref|YP_003483764.1|	-	0.82	9.7	4.7	1.8	8.6	3.3	1.5	1	0	0	1	1	1	0	Carnitine	deficiency-associated	protein	3
Ribosomal_60s	PF00428.14	gi|289597068|ref|YP_003483764.1|	-	9.9	6.6	15.3	13	6.2	7.3	3.3	3	1	0	3	3	3	0	60s	Acidic	ribosomal	protein
Ribosomal_S13	PF00416.17	gi|289597069|ref|YP_003483765.1|	-	2e-34	118.2	1.0	2.4e-34	117.9	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.6	gi|289597069|ref|YP_003483765.1|	-	0.0062	15.1	0.0	0.0071	14.9	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
S4	PF01479.20	gi|289597070|ref|YP_003483766.1|	-	4.9e-13	48.2	0.1	4.9e-13	48.2	0.1	1.6	2	0	0	2	2	2	1	S4	domain
Ribosomal_S4	PF00163.14	gi|289597070|ref|YP_003483766.1|	-	5.2e-05	23.5	2.4	0.00011	22.5	1.7	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.14	gi|289597071|ref|YP_003483767.1|	-	6.5e-40	135.7	0.3	7.8e-40	135.4	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.21	gi|289597072|ref|YP_003483768.1|	-	2.6e-24	85.5	0.0	2e-23	82.6	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|289597072|ref|YP_003483768.1|	-	1.1e-15	56.5	0.0	1.4e-15	56.1	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L_2	PF13656.1	gi|289597072|ref|YP_003483768.1|	-	0.11	11.9	0.0	15	5.0	0.0	2.4	2	0	0	2	2	2	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Esterase_phd	PF10503.4	gi|289597073|ref|YP_003483769.1|	-	7e-13	48.3	0.0	1e-12	47.7	0.0	1.1	1	0	0	1	1	1	1	Esterase	PHB	depolymerase
Abhydrolase_5	PF12695.2	gi|289597073|ref|YP_003483769.1|	-	2.4e-09	37.1	0.0	3e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|289597073|ref|YP_003483769.1|	-	1.6e-08	34.3	0.0	3e-08	33.3	0.0	1.4	1	1	0	1	1	1	1	Phospholipase/Carboxylesterase
Esterase	PF00756.15	gi|289597073|ref|YP_003483769.1|	-	5.4e-07	29.2	0.0	7.6e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Abhydrolase_6	PF12697.2	gi|289597073|ref|YP_003483769.1|	-	3.1e-06	27.2	0.0	0.00016	21.6	0.0	2.1	1	1	1	2	2	2	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|289597073|ref|YP_003483769.1|	-	7.9e-06	25.2	0.0	1.2e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_1	PF00561.15	gi|289597073|ref|YP_003483769.1|	-	0.012	15.2	0.0	1.4	8.3	0.0	2.1	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
DLH	PF01738.13	gi|289597073|ref|YP_003483769.1|	-	0.02	14.1	0.0	0.029	13.6	0.0	1.2	1	0	0	1	1	1	0	Dienelactone	hydrolase	family
BAAT_C	PF08840.6	gi|289597073|ref|YP_003483769.1|	-	0.038	13.6	0.0	0.055	13.1	0.0	1.2	1	0	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
COesterase	PF00135.23	gi|289597073|ref|YP_003483769.1|	-	0.041	12.5	0.0	0.28	9.8	0.0	1.9	2	0	0	2	2	2	0	Carboxylesterase	family
DUF915	PF06028.6	gi|289597073|ref|YP_003483769.1|	-	0.07	12.1	0.2	0.93	8.5	0.1	2.0	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Radical_SAM	PF04055.16	gi|289597074|ref|YP_003483770.1|	-	1.7e-13	51.0	0.2	3.3e-13	50.1	0.1	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289597074|ref|YP_003483770.1|	-	1.1e-08	35.2	0.0	2.7e-08	34.0	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289597074|ref|YP_003483770.1|	-	1.4e-06	28.2	0.0	2.8e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|289597074|ref|YP_003483770.1|	-	0.035	14.4	2.0	0.14	12.5	1.4	2.1	1	0	0	1	1	1	0	Iron-sulfur	cluster-binding	domain
UPF0104	PF03706.8	gi|289597075|ref|YP_003483771.1|	-	0.014	14.7	0.3	0.019	14.2	0.2	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0104)
ABC_tran	PF00005.22	gi|289597076|ref|YP_003483772.1|	-	2.2e-33	115.4	0.0	3.4e-33	114.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE	PF03459.12	gi|289597076|ref|YP_003483772.1|	-	3.7e-08	33.3	0.0	5.3e-07	29.6	0.0	2.4	2	1	0	2	2	2	1	TOBE	domain
AAA_21	PF13304.1	gi|289597076|ref|YP_003483772.1|	-	4.2e-08	33.4	0.7	0.0038	17.2	0.1	2.5	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|289597076|ref|YP_003483772.1|	-	1.6e-05	24.1	2.5	0.0028	16.7	0.8	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|289597076|ref|YP_003483772.1|	-	0.00037	20.3	0.0	0.0033	17.3	0.0	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
SMC_N	PF02463.14	gi|289597076|ref|YP_003483772.1|	-	0.0018	17.5	0.1	0.65	9.1	0.0	2.3	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.16	gi|289597076|ref|YP_003483772.1|	-	0.0037	16.4	0.0	0.012	14.8	0.0	1.7	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
ABC_ATPase	PF09818.4	gi|289597076|ref|YP_003483772.1|	-	0.01	14.4	1.9	5.7	5.4	0.2	3.0	2	1	1	3	3	3	0	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.1	gi|289597076|ref|YP_003483772.1|	-	0.013	15.6	0.2	0.05	13.7	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|289597076|ref|YP_003483772.1|	-	0.019	15.3	3.6	0.087	13.1	2.6	2.0	1	1	0	1	1	1	0	AAA	domain
TOBE_2	PF08402.5	gi|289597076|ref|YP_003483772.1|	-	0.021	14.8	0.0	0.053	13.5	0.0	1.8	1	0	0	1	1	1	0	TOBE	domain
AAA_16	PF13191.1	gi|289597076|ref|YP_003483772.1|	-	0.022	14.7	0.0	0.038	13.9	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|289597076|ref|YP_003483772.1|	-	0.026	13.4	0.1	0.05	12.4	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|289597076|ref|YP_003483772.1|	-	0.051	13.2	0.1	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
cobW	PF02492.14	gi|289597076|ref|YP_003483772.1|	-	0.062	12.7	0.1	0.12	11.8	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|289597076|ref|YP_003483772.1|	-	0.069	12.9	0.1	0.13	11.9	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_29	PF13555.1	gi|289597076|ref|YP_003483772.1|	-	0.079	12.5	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NB-ARC	PF00931.17	gi|289597076|ref|YP_003483772.1|	-	0.088	11.6	0.2	2	7.1	0.0	2.2	2	0	0	2	2	2	0	NB-ARC	domain
IstB_IS21	PF01695.12	gi|289597076|ref|YP_003483772.1|	-	0.11	11.9	0.1	0.32	10.3	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|289597076|ref|YP_003483772.1|	-	0.11	12.0	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|289597076|ref|YP_003483772.1|	-	0.13	11.5	0.0	0.47	9.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|289597076|ref|YP_003483772.1|	-	0.15	11.2	0.0	0.29	10.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|289597076|ref|YP_003483772.1|	-	0.2	11.8	1.1	1.5	8.9	0.8	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
BPD_transp_1	PF00528.17	gi|289597077|ref|YP_003483773.1|	-	3.8e-22	78.7	15.8	3.8e-22	78.7	10.9	3.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.1	gi|289597078|ref|YP_003483774.1|	-	5.2e-36	124.4	0.0	6.3e-36	124.1	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|289597078|ref|YP_003483774.1|	-	2.5e-08	34.0	3.0	5.2e-08	32.9	2.1	1.5	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|289597078|ref|YP_003483774.1|	-	0.0074	16.0	2.4	2.7	7.6	0.4	2.6	2	2	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|289597078|ref|YP_003483774.1|	-	0.014	14.7	0.1	0.041	13.2	0.0	1.9	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein
EamA	PF00892.15	gi|289597079|ref|YP_003483775.1|	-	4.3e-09	36.4	17.8	5.3e-09	36.1	12.3	1.1	1	0	0	1	1	1	1	EamA-like	transporter	family
EmrE	PF13536.1	gi|289597079|ref|YP_003483775.1|	-	1.7e-05	25.0	12.5	1.7e-05	25.0	8.7	2.0	1	1	1	2	2	2	1	Multidrug	resistance	efflux	transporter
UPF0546	PF10639.4	gi|289597079|ref|YP_003483775.1|	-	0.075	12.8	4.0	0.055	13.2	0.8	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0546
TPT	PF03151.11	gi|289597079|ref|YP_003483775.1|	-	1.7	8.2	15.7	5.4	6.6	10.9	1.8	1	1	0	1	1	1	0	Triose-phosphate	Transporter	family
NADHdh-2_N	PF12155.3	gi|289597079|ref|YP_003483775.1|	-	3.1	8.0	6.1	1.5	9.0	1.7	2.0	2	0	0	2	2	2	0	NADH	dehydrogenase	subunit	2	N-terminal
LigB	PF02900.13	gi|289597080|ref|YP_003483776.1|	-	8.8e-13	47.8	0.0	1.1e-12	47.5	0.0	1.1	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Nup84_Nup100	PF04121.8	gi|289597080|ref|YP_003483776.1|	-	0.084	10.5	0.0	0.12	10.0	0.0	1.1	1	0	0	1	1	1	0	Nuclear	pore	protein	84	/	107
Memo	PF01875.12	gi|289597080|ref|YP_003483776.1|	-	0.11	11.3	0.1	0.3	9.9	0.0	1.6	2	0	0	2	2	2	0	Memo-like	protein
Lon_C	PF05362.8	gi|289597081|ref|YP_003483777.1|	-	5.6e-32	110.7	4.4	9.4e-32	109.9	3.0	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_32	PF13654.1	gi|289597081|ref|YP_003483777.1|	-	1.1e-31	110.0	0.2	2.3e-22	79.3	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|289597081|ref|YP_003483777.1|	-	3.6e-16	58.9	0.0	5.9e-09	35.3	0.0	2.3	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|289597081|ref|YP_003483777.1|	-	6.2e-15	55.0	0.0	5.3e-08	32.5	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
MCM	PF00493.18	gi|289597081|ref|YP_003483777.1|	-	3.4e-13	49.1	0.2	0.00024	20.0	0.0	3.4	3	0	0	3	3	3	3	MCM2/3/5	family
AAA_5	PF07728.9	gi|289597081|ref|YP_003483777.1|	-	3.7e-11	42.9	0.0	6.3e-05	22.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
ChlI	PF13541.1	gi|289597081|ref|YP_003483777.1|	-	8.6e-10	38.1	0.3	2e-09	36.9	0.2	1.7	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
RuvB_N	PF05496.7	gi|289597081|ref|YP_003483777.1|	-	1.4e-06	27.5	0.0	0.0035	16.4	0.0	2.4	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|289597081|ref|YP_003483777.1|	-	1.4e-06	28.4	0.0	0.0011	19.1	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289597081|ref|YP_003483777.1|	-	6.6e-06	26.2	0.0	0.0083	16.1	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA	PF00004.24	gi|289597081|ref|YP_003483777.1|	-	1.9e-05	24.8	0.0	0.37	10.9	0.0	2.9	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|289597081|ref|YP_003483777.1|	-	9.3e-05	21.2	1.1	0.13	10.9	0.0	3.2	4	0	0	4	4	4	2	TIP49	C-terminus
AAA_3	PF07726.6	gi|289597081|ref|YP_003483777.1|	-	0.00012	21.6	0.0	0.016	14.8	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|289597081|ref|YP_003483777.1|	-	0.00021	20.9	0.0	0.00069	19.3	0.0	1.8	2	0	0	2	2	2	1	NACHT	domain
AAA_16	PF13191.1	gi|289597081|ref|YP_003483777.1|	-	0.0015	18.5	0.0	0.014	15.4	0.0	2.4	3	0	0	3	3	3	1	AAA	ATPase	domain
T2SE	PF00437.15	gi|289597081|ref|YP_003483777.1|	-	0.0021	17.0	0.0	0.0043	16.0	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|289597081|ref|YP_003483777.1|	-	0.0044	16.2	0.0	0.013	14.7	0.0	1.8	1	0	0	1	1	1	1	PhoH-like	protein
YwiC	PF14256.1	gi|289597081|ref|YP_003483777.1|	-	0.0047	17.0	0.0	0.0085	16.1	0.0	1.3	1	0	0	1	1	1	1	YwiC-like	protein
AAA_30	PF13604.1	gi|289597081|ref|YP_003483777.1|	-	0.01	15.4	0.0	0.1	12.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Ribosomal_L18_c	PF14204.1	gi|289597081|ref|YP_003483777.1|	-	0.02	15.4	0.1	0.02	15.4	0.1	2.7	3	0	0	3	3	2	0	Ribosomal	L18	C-terminal	region
IstB_IS21	PF01695.12	gi|289597081|ref|YP_003483777.1|	-	0.029	13.8	0.0	0.13	11.7	0.0	2.0	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
PRA1	PF03208.14	gi|289597081|ref|YP_003483777.1|	-	0.036	13.4	0.0	0.062	12.6	0.0	1.3	1	0	0	1	1	1	0	PRA1	family	protein
AAA_19	PF13245.1	gi|289597081|ref|YP_003483777.1|	-	0.039	13.7	0.0	0.11	12.2	0.0	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
NapE	PF06796.6	gi|289597081|ref|YP_003483777.1|	-	0.056	12.7	0.5	0.17	11.2	0.3	1.8	1	0	0	1	1	1	0	Periplasmic	nitrate	reductase	protein	NapE
DUF2075	PF09848.4	gi|289597081|ref|YP_003483777.1|	-	0.062	12.2	0.0	0.12	11.3	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
FtsK_SpoIIIE	PF01580.13	gi|289597081|ref|YP_003483777.1|	-	0.069	12.6	0.0	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
PPV_E1_C	PF00519.12	gi|289597081|ref|YP_003483777.1|	-	0.077	11.5	0.0	0.12	10.9	0.0	1.3	1	0	0	1	1	1	0	Papillomavirus	helicase
AAA_25	PF13481.1	gi|289597081|ref|YP_003483777.1|	-	0.086	12.2	0.0	0.42	9.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|289597081|ref|YP_003483777.1|	-	0.1	12.9	0.9	2.2	8.6	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
AAA_10	PF12846.2	gi|289597081|ref|YP_003483777.1|	-	0.12	11.8	0.0	0.26	10.6	0.0	1.6	2	0	0	2	2	2	0	AAA-like	domain
DUF3671	PF12420.3	gi|289597081|ref|YP_003483777.1|	-	0.63	10.0	6.8	0.34	10.9	2.7	2.0	2	0	0	2	2	1	0	Protein	of	unknown	function
CGI-121	PF08617.5	gi|289597082|ref|YP_003483778.1|	-	2.1e-09	37.2	0.0	2.4e-09	37.0	0.0	1.1	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
DUF2039	PF10217.4	gi|289597082|ref|YP_003483778.1|	-	0.0096	15.9	0.2	0.013	15.5	0.1	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2039)
TGT	PF01702.13	gi|289597083|ref|YP_003483779.1|	-	1.3e-92	309.3	0.1	1.6e-92	309.1	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
CTP_transf_1	PF01148.15	gi|289597084|ref|YP_003483780.1|	-	1.8e-15	57.2	20.6	1.3e-13	51.2	14.3	2.2	1	1	0	1	1	1	1	Cytidylyltransferase	family
DUF1212	PF06738.7	gi|289597084|ref|YP_003483780.1|	-	0.035	13.5	3.2	0.43	10.0	1.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
Mak16	PF04874.9	gi|289597084|ref|YP_003483780.1|	-	0.039	14.0	0.6	0.064	13.3	0.4	1.2	1	0	0	1	1	1	0	Mak16	protein	C-terminal	region
DUF809	PF05663.6	gi|289597084|ref|YP_003483780.1|	-	0.19	11.6	0.4	0.7	9.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF809)
DUF3169	PF11368.3	gi|289597084|ref|YP_003483780.1|	-	0.66	9.1	10.2	3.1	6.9	0.1	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3169)
Ribosomal_S8e	PF01201.17	gi|289597085|ref|YP_003483781.1|	-	4.5e-40	136.8	0.7	5e-40	136.7	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
SRP19	PF01922.12	gi|289597086|ref|YP_003483782.1|	-	4.2e-25	88.1	0.5	4.7e-25	87.9	0.4	1.0	1	0	0	1	1	1	1	SRP19	protein
DUF211	PF02680.9	gi|289597087|ref|YP_003483783.1|	-	3.1e-38	129.4	2.3	3.8e-38	129.1	1.6	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
Macro	PF01661.16	gi|289597088|ref|YP_003483784.1|	-	3.7e-40	136.5	0.5	7.3e-40	135.5	0.1	1.6	2	0	0	2	2	2	1	Macro	domain
FTH	PF01827.22	gi|289597088|ref|YP_003483784.1|	-	0.14	11.7	0.4	0.24	10.9	0.0	1.5	2	0	0	2	2	2	0	FTH	domain
Glyco_hydro_25	PF01183.15	gi|289597089|ref|YP_003483785.1|	-	7.3e-51	172.5	3.2	7.3e-51	172.5	2.2	1.9	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	25
Amidase_6	PF12671.2	gi|289597089|ref|YP_003483785.1|	-	2.2e-17	63.5	5.6	2.2e-17	63.5	3.9	2.4	3	0	0	3	3	3	1	Putative	amidase	domain
SH3_3	PF08239.6	gi|289597089|ref|YP_003483785.1|	-	4.5e-14	52.3	10.6	8.4e-09	35.4	0.5	3.5	3	0	0	3	3	3	2	Bacterial	SH3	domain
Pribosyltran	PF00156.22	gi|289597090|ref|YP_003483786.1|	-	3e-22	78.6	0.1	5.8e-22	77.7	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GerE	PF00196.14	gi|289597090|ref|YP_003483786.1|	-	0.00038	19.7	0.0	0.00085	18.5	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
UPRTase	PF14681.1	gi|289597090|ref|YP_003483786.1|	-	0.00047	19.4	0.0	0.0007	18.8	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|289597090|ref|YP_003483786.1|	-	0.00087	18.6	0.0	0.0013	18.0	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase
Sigma70_r4_2	PF08281.7	gi|289597090|ref|YP_003483786.1|	-	0.0012	18.2	0.1	0.0033	16.8	0.0	1.8	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_40	PF14493.1	gi|289597090|ref|YP_003483786.1|	-	0.01	16.0	0.1	0.022	14.9	0.1	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|289597090|ref|YP_003483786.1|	-	0.011	15.3	0.0	0.039	13.6	0.0	1.9	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_11	PF08279.7	gi|289597090|ref|YP_003483786.1|	-	0.019	14.5	1.1	3.1	7.5	0.1	3.1	3	0	0	3	3	3	0	HTH	domain
Zeta_toxin	PF06414.7	gi|289597090|ref|YP_003483786.1|	-	0.034	13.2	0.0	0.065	12.3	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Terminase_5	PF06056.7	gi|289597090|ref|YP_003483786.1|	-	0.071	12.6	0.2	0.34	10.4	0.0	2.2	3	0	0	3	3	3	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_30	PF13556.1	gi|289597090|ref|YP_003483786.1|	-	0.12	11.9	0.1	2.9	7.5	0.0	2.4	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
PGA2	PF07543.7	gi|289597091|ref|YP_003483787.1|	-	0.00054	19.7	0.5	0.00062	19.5	0.4	1.2	1	0	0	1	1	1	1	Protein	trafficking	PGA2
DUF2417	PF10329.4	gi|289597091|ref|YP_003483787.1|	-	0.088	12.2	0.0	0.096	12.0	0.0	1.0	1	0	0	1	1	1	0	Region	of	unknown	function	(DUF2417)
HTH_3	PF01381.17	gi|289597092|ref|YP_003483788.1|	-	6.6e-16	57.8	2.6	1.2e-15	57.0	1.8	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|289597092|ref|YP_003483788.1|	-	5e-11	42.5	1.9	1e-10	41.5	1.3	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|289597092|ref|YP_003483788.1|	-	5.8e-06	26.4	0.0	1.7e-05	24.8	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|289597092|ref|YP_003483788.1|	-	0.00032	20.2	0.8	0.00081	18.9	0.5	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF4428	PF14471.1	gi|289597092|ref|YP_003483788.1|	-	0.0012	18.5	2.2	0.0013	18.4	0.3	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4428)
HTH_37	PF13744.1	gi|289597092|ref|YP_003483788.1|	-	0.01	15.6	0.1	0.023	14.5	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
XkdW	PF09636.5	gi|289597092|ref|YP_003483788.1|	-	0.64	9.9	4.3	0.64	9.9	0.1	2.3	1	1	0	2	2	2	0	XkdW	protein
SBP	PF03110.9	gi|289597092|ref|YP_003483788.1|	-	1.1	9.5	4.6	6.2	7.1	3.2	2.1	1	1	0	1	1	1	0	SBP	domain
Aminotran_5	PF00266.14	gi|289597093|ref|YP_003483789.1|	-	1.3e-34	119.5	0.1	1.7e-34	119.2	0.1	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
TetR_N	PF00440.18	gi|289597093|ref|YP_003483789.1|	-	0.0072	15.9	0.0	0.021	14.4	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
2-Hacid_dh_C	PF02826.14	gi|289597094|ref|YP_003483790.1|	-	1.4e-72	242.5	0.0	2.6e-72	241.7	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|289597094|ref|YP_003483790.1|	-	2.9e-33	114.1	0.2	3.4e-33	113.9	0.1	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|289597094|ref|YP_003483790.1|	-	8.1e-09	35.5	0.0	3e-08	33.6	0.0	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|289597094|ref|YP_003483790.1|	-	0.00036	19.9	0.1	0.0011	18.3	0.0	1.8	2	1	1	3	3	3	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|289597094|ref|YP_003483790.1|	-	0.0025	18.2	0.0	0.0057	17.0	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AdoHcyase_NAD	PF00670.16	gi|289597094|ref|YP_003483790.1|	-	0.0029	17.4	0.1	0.0076	16.1	0.0	1.7	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|289597094|ref|YP_003483790.1|	-	0.0062	17.0	0.0	2.4	8.7	0.0	2.4	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
3HCDH_N	PF02737.13	gi|289597094|ref|YP_003483790.1|	-	0.018	14.6	0.1	0.043	13.4	0.0	1.7	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UPF0180	PF03698.8	gi|289597094|ref|YP_003483790.1|	-	0.019	14.7	0.0	0.069	12.9	0.0	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0180)
TrkA_N	PF02254.13	gi|289597094|ref|YP_003483790.1|	-	0.044	13.7	0.4	0.21	11.5	0.0	2.4	2	1	0	2	2	2	0	TrkA-N	domain
XdhC_C	PF13478.1	gi|289597094|ref|YP_003483790.1|	-	0.049	13.9	0.0	0.12	12.6	0.0	1.7	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Nitro_FeMo-Co	PF02579.12	gi|289597094|ref|YP_003483790.1|	-	0.052	13.6	1.0	1.1	9.4	0.0	3.2	4	0	0	4	4	4	0	Dinitrogenase	iron-molybdenum	cofactor
ELFV_dehydrog	PF00208.16	gi|289597094|ref|YP_003483790.1|	-	0.055	13.0	0.0	0.12	11.9	0.0	1.6	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Shikimate_DH	PF01488.15	gi|289597094|ref|YP_003483790.1|	-	0.1	12.7	3.5	2.5	8.1	1.4	2.9	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|289597094|ref|YP_003483790.1|	-	0.11	12.8	0.1	0.33	11.2	0.0	1.8	2	0	0	2	2	2	0	Putative	NAD(P)-binding
DUF1015	PF06245.6	gi|289597095|ref|YP_003483791.1|	-	3.8e-114	381.4	5.2	4.3e-114	381.2	3.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1015)
CBS	PF00571.23	gi|289597095|ref|YP_003483791.1|	-	0.0073	16.0	0.0	0.089	12.6	0.0	2.5	2	0	0	2	2	2	1	CBS	domain
Gln-synt_C	PF00120.19	gi|289597096|ref|YP_003483792.1|	-	6e-64	215.6	0.0	9.1e-64	215.0	0.0	1.3	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|289597096|ref|YP_003483792.1|	-	6.4e-18	64.1	0.0	2.9e-17	62.0	0.0	2.0	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Lactamase_B_2	PF12706.2	gi|289597097|ref|YP_003483793.1|	-	6.3e-30	104.1	0.0	8.9e-30	103.6	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|289597097|ref|YP_003483793.1|	-	2.3e-14	53.4	0.0	1.1e-12	48.0	0.0	2.2	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|289597097|ref|YP_003483793.1|	-	1.4e-07	30.8	0.0	2.6e-07	29.9	0.0	1.4	1	0	0	1	1	1	1	tRNase	Z	endonuclease
PDEase_II	PF02112.10	gi|289597097|ref|YP_003483793.1|	-	7.3e-05	21.8	0.0	0.00011	21.3	0.0	1.3	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
IF3_N	PF05198.11	gi|289597097|ref|YP_003483793.1|	-	0.033	14.1	0.1	0.079	12.9	0.1	1.7	1	0	0	1	1	1	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Nitro_FeMo-Co	PF02579.12	gi|289597097|ref|YP_003483793.1|	-	0.11	12.5	0.2	0.34	11.0	0.0	1.9	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
tRNA-synt_1b	PF00579.20	gi|289597098|ref|YP_003483794.1|	-	2.1e-43	148.5	0.0	4.9e-25	88.2	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Toprim_4	PF13662.1	gi|289597099|ref|YP_003483795.1|	-	2.2e-07	30.8	0.0	3.8e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|289597099|ref|YP_003483795.1|	-	8.9e-07	28.8	0.1	3e-06	27.1	0.1	1.8	1	1	0	1	1	1	1	Toprim	domain
Toprim_3	PF13362.1	gi|289597099|ref|YP_003483795.1|	-	0.002	18.3	0.0	0.0028	17.8	0.0	1.2	1	0	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.1	gi|289597099|ref|YP_003483795.1|	-	0.0064	16.7	0.0	0.0094	16.2	0.0	1.3	1	0	0	1	1	1	1	Toprim-like
OKR_DC_1_N	PF03709.10	gi|289597099|ref|YP_003483795.1|	-	0.071	13.1	0.0	0.16	12.0	0.0	1.5	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
Act-Frag_cataly	PF09192.5	gi|289597099|ref|YP_003483795.1|	-	0.089	11.7	0.0	0.1	11.5	0.0	1.1	1	0	0	1	1	1	0	Actin-fragmin	kinase,	catalytic
Methyltransf_11	PF08241.7	gi|289597100|ref|YP_003483796.1|	-	3.3e-12	46.7	0.0	5.2e-12	46.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|289597100|ref|YP_003483796.1|	-	6.1e-12	46.1	0.0	1.3e-11	45.0	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|289597100|ref|YP_003483796.1|	-	6.8e-12	45.2	0.2	9.3e-12	44.7	0.2	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|289597100|ref|YP_003483796.1|	-	7.4e-09	35.8	0.0	1.6e-08	34.8	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|289597100|ref|YP_003483796.1|	-	6.6e-08	32.6	0.0	2.4e-07	30.7	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|289597100|ref|YP_003483796.1|	-	2.6e-06	27.8	0.0	4.4e-06	27.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|289597100|ref|YP_003483796.1|	-	7.7e-06	25.1	0.0	1.2e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|289597100|ref|YP_003483796.1|	-	3.5e-05	23.2	0.0	7.5e-05	22.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|289597100|ref|YP_003483796.1|	-	0.00038	20.2	0.0	0.0013	18.4	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|289597100|ref|YP_003483796.1|	-	0.011	15.2	0.0	0.024	14.0	0.0	1.5	1	0	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Pox_MCEL	PF03291.11	gi|289597100|ref|YP_003483796.1|	-	0.018	13.9	0.5	0.033	13.0	0.4	1.3	1	0	0	1	1	1	0	mRNA	capping	enzyme
UPF0020	PF01170.13	gi|289597100|ref|YP_003483796.1|	-	0.059	12.9	0.1	0.22	11.0	0.0	1.9	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Adenosine_kin	PF04008.9	gi|289597101|ref|YP_003483797.1|	-	4.4e-72	240.6	0.2	4.9e-72	240.4	0.2	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
FGGY_N	PF00370.16	gi|289597102|ref|YP_003483798.1|	-	1.3e-81	273.5	0.1	2.6e-81	272.5	0.0	1.6	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|289597102|ref|YP_003483798.1|	-	5.4e-53	179.5	0.0	4.1e-52	176.6	0.0	2.0	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|289597102|ref|YP_003483798.1|	-	0.028	13.7	0.1	5.2	6.2	0.0	2.3	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
V4R	PF02830.13	gi|289597103|ref|YP_003483799.1|	-	5.5e-14	51.7	0.5	8.3e-14	51.1	0.3	1.3	1	0	0	1	1	1	1	V4R	domain
DUF4064	PF13273.1	gi|289597104|ref|YP_003483800.1|	-	0.0046	17.0	0.7	0.022	14.8	0.1	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4064)
DUF3753	PF12575.3	gi|289597104|ref|YP_003483800.1|	-	0.0092	15.7	0.0	0.03	14.1	0.0	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3753)
tRNA_SAD	PF07973.9	gi|289597105|ref|YP_003483801.1|	-	3.7e-07	29.9	0.2	9.3e-07	28.6	0.1	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|289597105|ref|YP_003483801.1|	-	3.4e-05	22.3	0.0	0.00013	20.4	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.14	gi|289597105|ref|YP_003483801.1|	-	0.012	15.2	0.0	0.034	13.8	0.0	1.9	1	0	0	1	1	1	0	DHHA1	domain
PH_11	PF15413.1	gi|289597105|ref|YP_003483801.1|	-	0.033	14.4	0.2	0.11	12.8	0.0	2.1	2	0	0	2	2	2	0	Pleckstrin	homology	domain
Nop53	PF07767.6	gi|289597105|ref|YP_003483801.1|	-	0.04	12.9	0.1	0.057	12.4	0.1	1.2	1	0	0	1	1	1	0	Nop53	(60S	ribosomal	biogenesis)
Peptidase_M42	PF05343.9	gi|289597106|ref|YP_003483802.1|	-	1.5e-87	293.0	0.0	1.7e-87	292.8	0.0	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.23	gi|289597106|ref|YP_003483802.1|	-	4.3e-11	42.6	0.0	7.4e-11	41.9	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.12	gi|289597106|ref|YP_003483802.1|	-	4.9e-05	23.1	0.0	0.00024	20.9	0.0	1.9	2	0	0	2	2	2	1	Peptidase	family	M28
Peptidase_M18	PF02127.10	gi|289597106|ref|YP_003483802.1|	-	0.013	14.0	0.0	0.023	13.1	0.0	1.4	1	0	0	1	1	1	0	Aminopeptidase	I	zinc	metalloprotease	(M18)
Aminotran_1_2	PF00155.16	gi|289597107|ref|YP_003483803.1|	-	6e-38	130.7	0.0	7.6e-38	130.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|289597107|ref|YP_003483803.1|	-	3.2e-11	42.4	0.0	8.9e-11	40.9	0.0	1.6	1	1	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
Beta_elim_lyase	PF01212.16	gi|289597107|ref|YP_003483803.1|	-	0.0064	15.6	0.0	0.01	15.0	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|289597107|ref|YP_003483803.1|	-	0.012	14.6	0.0	0.025	13.6	0.0	1.5	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Gln-synt_C	PF00120.19	gi|289597108|ref|YP_003483804.1|	-	1.1e-92	309.8	0.0	1.4e-92	309.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|289597108|ref|YP_003483804.1|	-	2.2e-22	78.4	0.1	4.9e-22	77.3	0.1	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
Pyridoxal_deC	PF00282.14	gi|289597109|ref|YP_003483805.1|	-	4.2e-28	97.8	0.0	9.7e-28	96.6	0.0	1.6	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.14	gi|289597109|ref|YP_003483805.1|	-	1e-06	27.7	0.0	1.7e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|289597109|ref|YP_003483805.1|	-	6.6e-06	25.4	0.0	1.2e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|289597109|ref|YP_003483805.1|	-	6.9e-06	25.2	0.0	2.3e-05	23.5	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
GDC-P	PF02347.11	gi|289597109|ref|YP_003483805.1|	-	0.15	10.7	0.0	0.26	9.9	0.0	1.4	1	0	0	1	1	1	0	Glycine	cleavage	system	P-protein
TPP_enzyme_C	PF02775.16	gi|289597110|ref|YP_003483806.1|	-	8e-26	90.4	0.4	1.2e-25	89.8	0.3	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|289597110|ref|YP_003483806.1|	-	5.9e-05	22.1	0.6	0.00011	21.2	0.4	1.5	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
POR_N	PF01855.14	gi|289597111|ref|YP_003483807.1|	-	5.4e-72	242.0	0.2	7.2e-72	241.6	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|289597111|ref|YP_003483807.1|	-	4.8e-10	39.4	0.0	4.7e-09	36.2	0.0	2.4	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|289597111|ref|YP_003483807.1|	-	0.082	12.3	0.2	0.12	11.9	0.1	1.3	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4	PF00037.22	gi|289597112|ref|YP_003483808.1|	-	4.6e-14	51.3	17.5	5.1e-08	32.1	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|289597112|ref|YP_003483808.1|	-	2.9e-10	39.7	8.4	8.2e-05	22.3	0.7	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|289597112|ref|YP_003483808.1|	-	1.2e-09	37.6	15.7	8.2e-07	28.6	3.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|289597112|ref|YP_003483808.1|	-	1.4e-09	37.2	13.3	4.1e-05	23.2	1.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|289597112|ref|YP_003483808.1|	-	1.5e-09	37.5	6.6	3.1e-09	36.5	4.6	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|289597112|ref|YP_003483808.1|	-	1.9e-08	34.5	16.7	9.7e-08	32.2	5.8	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|289597112|ref|YP_003483808.1|	-	8.2e-08	32.8	18.8	3.4e-05	24.5	6.5	2.4	2	1	1	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|289597112|ref|YP_003483808.1|	-	2.8e-06	27.6	7.0	0.00065	20.0	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.1	gi|289597112|ref|YP_003483808.1|	-	3.7e-06	27.1	9.3	0.00016	21.8	7.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|289597112|ref|YP_003483808.1|	-	3.7e-06	26.8	7.4	6e-06	26.1	5.1	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|289597112|ref|YP_003483808.1|	-	8e-06	26.3	7.7	0.041	14.4	0.1	2.5	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|289597112|ref|YP_003483808.1|	-	7.1e-05	23.1	3.8	0.062	13.7	0.2	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|289597112|ref|YP_003483808.1|	-	0.0002	21.4	11.4	0.07	13.4	0.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|289597112|ref|YP_003483808.1|	-	0.00037	20.7	7.5	0.00076	19.7	5.2	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|289597112|ref|YP_003483808.1|	-	0.23	11.3	4.4	0.99	9.3	3.0	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
POR	PF01558.13	gi|289597113|ref|YP_003483809.1|	-	4.2e-37	127.6	2.3	5e-37	127.4	1.6	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Peptidase_M20	PF01546.23	gi|289597114|ref|YP_003483810.1|	-	1.5e-31	109.3	0.0	1.9e-31	109.0	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|289597114|ref|YP_003483810.1|	-	2.5e-17	62.6	0.2	8.2e-17	60.9	0.0	2.0	3	0	0	3	3	3	1	Peptidase	dimerisation	domain
IMS	PF00817.15	gi|289597114|ref|YP_003483810.1|	-	0.12	12.1	0.0	0.27	11.0	0.0	1.6	1	0	0	1	1	1	0	impB/mucB/samB	family
Glyco_trans_1_3	PF13528.1	gi|289597115|ref|YP_003483811.1|	-	6.8e-25	87.9	0.0	1.4e-24	86.9	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|289597115|ref|YP_003483811.1|	-	5.1e-11	42.5	0.0	1.2e-10	41.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Head_binding	PF09008.5	gi|289597115|ref|YP_003483811.1|	-	0.056	13.4	0.0	8.6	6.4	0.0	2.4	2	0	0	2	2	2	0	Head	binding
UPF0104	PF03706.8	gi|289597116|ref|YP_003483812.1|	-	1.3e-38	132.9	24.9	1.7e-38	132.6	17.3	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
DUF2070	PF09843.4	gi|289597117|ref|YP_003483813.1|	-	3.5e-33	114.5	1.3	4e-33	114.3	0.2	1.6	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2070)
Synaptonemal_3	PF15191.1	gi|289597117|ref|YP_003483813.1|	-	0.14	11.8	0.1	1.9	8.3	0.0	2.5	2	0	0	2	2	2	0	Synaptonemal	complex	central	element	protein	3
DUF72	PF01904.13	gi|289597118|ref|YP_003483814.1|	-	7.1e-39	133.9	0.0	8.3e-39	133.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Peptidase_M50	PF02163.17	gi|289597119|ref|YP_003483815.1|	-	1.7e-17	63.0	12.8	2.6e-16	59.1	5.7	3.1	3	1	0	3	3	3	1	Peptidase	family	M50
tRNA-synt_2c	PF01411.14	gi|289597120|ref|YP_003483816.1|	-	9.2e-114	380.7	0.0	3.3e-113	378.8	0.0	1.8	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|289597120|ref|YP_003483816.1|	-	2e-17	62.7	1.6	4.3e-17	61.7	1.1	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|289597120|ref|YP_003483816.1|	-	0.00033	20.2	0.5	0.00094	18.8	0.4	1.8	1	0	0	1	1	1	1	DHHA1	domain
DrsE_2	PF13686.1	gi|289597120|ref|YP_003483816.1|	-	0.12	12.1	0.0	0.26	11.0	0.0	1.6	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
DUF1676	PF07898.8	gi|289597120|ref|YP_003483816.1|	-	0.17	12.2	1.5	1.3	9.3	1.0	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1676)
Amidohydro_4	PF13147.1	gi|289597121|ref|YP_003483817.1|	-	5.1e-20	72.6	0.0	1.7e-19	70.9	0.0	1.7	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|289597121|ref|YP_003483817.1|	-	6.8e-15	55.5	0.0	2.5e-14	53.6	0.0	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|289597121|ref|YP_003483817.1|	-	9e-08	31.8	1.7	2.4e-07	30.4	0.1	2.5	3	0	0	3	3	3	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|289597121|ref|YP_003483817.1|	-	0.00041	19.7	0.0	0.016	14.4	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase	family
D-aminoacyl_C	PF07908.7	gi|289597121|ref|YP_003483817.1|	-	0.023	14.0	0.9	0.086	12.1	0.5	2.0	2	0	0	2	2	2	0	D-aminoacylase,	C-terminal	region
DHOase	PF12890.2	gi|289597121|ref|YP_003483817.1|	-	0.039	13.6	0.0	0.094	12.3	0.0	1.7	1	0	0	1	1	1	0	Dihydro-orotase-like
AMMECR1	PF01871.12	gi|289597122|ref|YP_003483818.1|	-	1.5e-59	199.9	0.0	1.9e-59	199.6	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Radical_SAM	PF04055.16	gi|289597123|ref|YP_003483819.1|	-	4.5e-20	72.4	0.1	6.9e-20	71.8	0.1	1.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|289597123|ref|YP_003483819.1|	-	1.5e-18	66.9	0.1	2.5e-18	66.2	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|289597123|ref|YP_003483819.1|	-	5.4e-13	49.2	0.1	9.3e-13	48.4	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SKI	PF01202.17	gi|289597123|ref|YP_003483819.1|	-	0.045	13.6	0.0	0.66	9.8	0.0	2.1	1	1	0	1	1	1	0	Shikimate	kinase
CTP_transf_3	PF02348.14	gi|289597123|ref|YP_003483819.1|	-	0.046	13.3	0.0	0.057	13.0	0.0	1.1	1	0	0	1	1	1	0	Cytidylyltransferase
DUF3215	PF11503.3	gi|289597124|ref|YP_003483820.1|	-	0.1	12.2	0.3	0.2	11.3	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3215)
Mei5	PF10376.4	gi|289597124|ref|YP_003483820.1|	-	0.12	11.9	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Double-strand	recombination	repair	protein
PIN_4	PF13638.1	gi|289597125|ref|YP_003483821.1|	-	1.6e-06	28.2	0.1	2.9e-06	27.4	0.1	1.4	1	0	0	1	1	1	1	PIN	domain
Peptidase_M24	PF00557.19	gi|289597126|ref|YP_003483822.1|	-	1.2e-17	64.2	0.0	3.2e-17	62.8	0.0	1.7	1	1	0	1	1	1	1	Metallopeptidase	family	M24
MatE	PF01554.13	gi|289597127|ref|YP_003483823.1|	-	1.8e-57	193.4	39.9	4.8e-31	107.5	7.9	2.7	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.1	gi|289597127|ref|YP_003483823.1|	-	2.4e-07	30.6	14.1	2.4e-07	30.6	9.8	4.5	3	2	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
Radical_SAM	PF04055.16	gi|289597128|ref|YP_003483824.1|	-	8.1e-23	81.3	0.0	1.6e-22	80.4	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|289597128|ref|YP_003483824.1|	-	1.5e-08	34.8	0.2	4.2e-08	33.4	0.0	1.8	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
OrfB_Zn_ribbon	PF07282.6	gi|289597128|ref|YP_003483824.1|	-	0.0045	16.6	0.2	0.0045	16.6	0.2	2.9	4	0	0	4	4	4	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.1	gi|289597128|ref|YP_003483824.1|	-	0.0084	15.5	1.6	0.0084	15.5	1.1	3.2	3	1	0	3	3	3	1	zinc-ribbon	domain
Fer4_14	PF13394.1	gi|289597128|ref|YP_003483824.1|	-	0.025	14.6	0.0	0.084	12.9	0.0	1.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|289597128|ref|YP_003483824.1|	-	0.034	13.9	0.2	0.034	13.9	0.1	2.8	3	0	0	3	3	3	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|289597128|ref|YP_003483824.1|	-	0.034	13.3	5.4	0.19	10.9	0.1	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|289597128|ref|YP_003483824.1|	-	1.5	8.6	6.5	2.7	7.8	0.7	2.7	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
AIRS	PF00586.19	gi|289597129|ref|YP_003483825.1|	-	4.3e-14	52.5	0.0	7e-14	51.8	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|289597129|ref|YP_003483825.1|	-	0.0013	18.7	0.0	0.0022	18.0	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
DUF2240	PF09999.4	gi|289597131|ref|YP_003483827.1|	-	1.2e-31	109.1	0.2	1.4e-31	108.8	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
NUDIX	PF00293.23	gi|289597132|ref|YP_003483828.1|	-	1.5e-16	60.2	0.0	2e-16	59.8	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
HMG-CoA_red	PF00368.13	gi|289597133|ref|YP_003483829.1|	-	1.2e-94	317.1	1.0	1.4e-94	316.8	0.7	1.1	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF3759	PF12585.3	gi|289597133|ref|YP_003483829.1|	-	0.077	12.9	1.7	0.13	12.1	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3759)
CARDB	PF07705.6	gi|289597134|ref|YP_003483830.1|	-	4.2e-24	84.5	27.0	3e-20	72.1	4.8	4.5	3	1	0	3	3	3	2	CARDB
Pro-kuma_activ	PF09286.6	gi|289597134|ref|YP_003483830.1|	-	9e-23	80.9	0.6	3.4e-22	79.0	0.0	2.3	3	0	0	3	3	3	1	Pro-kumamolisin,	activation	domain
DUF11	PF01345.13	gi|289597134|ref|YP_003483830.1|	-	9.3e-10	38.4	30.0	0.00045	20.2	3.0	5.2	4	0	0	4	4	4	3	Domain	of	unknown	function	DUF11
NPCBM_assoc	PF10633.4	gi|289597134|ref|YP_003483830.1|	-	6.6e-08	32.4	17.2	0.00042	20.2	3.6	5.0	3	1	0	3	3	3	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CarboxypepD_reg	PF13620.1	gi|289597134|ref|YP_003483830.1|	-	1e-07	31.8	3.7	1e-07	31.8	2.6	5.8	4	1	1	5	5	5	1	Carboxypeptidase	regulatory-like	domain
FixG_C	PF11614.3	gi|289597134|ref|YP_003483830.1|	-	7.8e-07	29.2	2.1	3e-06	27.3	0.6	2.6	2	0	0	2	2	2	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
A2M	PF00207.17	gi|289597134|ref|YP_003483830.1|	-	0.0075	15.8	1.1	2.2	7.9	0.0	2.8	2	0	0	2	2	2	2	Alpha-2-macroglobulin	family
TRAP_beta	PF05753.9	gi|289597134|ref|YP_003483830.1|	-	0.048	12.8	0.1	0.048	12.8	0.1	3.7	3	1	1	4	4	4	0	Translocon-associated	protein	beta	(TRAPB)
Iso_dh	PF00180.15	gi|289597135|ref|YP_003483831.1|	-	1.3e-72	244.6	0.1	2.3e-72	243.8	0.1	1.3	1	1	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PLDc_N	PF13396.1	gi|289597136|ref|YP_003483832.1|	-	5.6e-08	32.3	12.6	5.6e-08	32.3	8.7	1.7	2	0	0	2	2	1	1	Phospholipase_D-nuclease	N-terminal
PPC	PF04151.10	gi|289597136|ref|YP_003483832.1|	-	0.00019	22.3	0.7	0.00035	21.4	0.5	1.5	1	0	0	1	1	1	1	Bacterial	pre-peptidase	C-terminal	domain
DUF1883	PF08980.5	gi|289597136|ref|YP_003483832.1|	-	0.0011	18.5	0.2	0.0016	17.9	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1883)
NicO	PF03824.11	gi|289597136|ref|YP_003483832.1|	-	0.0073	15.6	0.3	0.0073	15.6	0.2	1.6	2	0	0	2	2	2	1	High-affinity	nickel-transport	protein
TrkH	PF02386.11	gi|289597136|ref|YP_003483832.1|	-	0.012	14.1	4.6	0.022	13.3	3.2	1.3	1	0	0	1	1	1	0	Cation	transport	protein
Glucos_trans_II	PF14264.1	gi|289597136|ref|YP_003483832.1|	-	0.015	14.3	1.2	0.015	14.3	0.8	1.8	2	0	0	2	2	2	0	Glucosyl	transferase	GtrII
POLO_box	PF00659.13	gi|289597136|ref|YP_003483832.1|	-	0.017	15.0	0.1	0.032	14.1	0.1	1.4	1	0	0	1	1	1	0	POLO	box	duplicated	region
DUF805	PF05656.9	gi|289597136|ref|YP_003483832.1|	-	0.02	14.6	0.9	0.02	14.6	0.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF805)
DUF843	PF05814.6	gi|289597136|ref|YP_003483832.1|	-	0.2	11.4	1.4	14	5.5	0.4	2.4	2	0	0	2	2	2	0	Baculovirus	protein	of	unknown	function	(DUF843)
DUF4131	PF13567.1	gi|289597136|ref|YP_003483832.1|	-	3.8	6.8	7.2	1.7	8.0	3.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
FixQ	PF05545.6	gi|289597136|ref|YP_003483832.1|	-	8.7	6.0	16.4	0.37	10.4	1.2	2.9	3	0	0	3	3	3	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Aconitase_C	PF00694.14	gi|289597137|ref|YP_003483833.1|	-	4.5e-19	68.8	0.0	5.7e-19	68.5	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|289597137|ref|YP_003483833.1|	-	4.9e-06	26.0	0.0	0.00024	20.5	0.0	2.0	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.15	gi|289597138|ref|YP_003483834.1|	-	6.2e-86	288.7	1.5	2.1e-55	188.0	0.3	2.1	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|289597138|ref|YP_003483834.1|	-	0.0039	15.7	0.0	0.0067	15.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Citrate_synt	PF00285.16	gi|289597139|ref|YP_003483835.1|	-	2.1e-143	477.3	0.0	2.4e-143	477.1	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
Amidohydro_1	PF01979.15	gi|289597140|ref|YP_003483836.1|	-	1.3e-43	149.9	0.0	1.6e-43	149.6	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|289597140|ref|YP_003483836.1|	-	1.5e-11	43.9	0.0	3.1e-11	42.9	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|289597140|ref|YP_003483836.1|	-	2.5e-10	40.1	0.0	6e-05	22.4	0.0	3.1	3	1	0	3	3	3	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|289597140|ref|YP_003483836.1|	-	2.2e-09	37.7	0.0	0.0019	18.3	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase
Chitin_synth_1N	PF08407.6	gi|289597140|ref|YP_003483836.1|	-	0.095	12.4	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Chitin	synthase	N-terminal
tRNA-synt_1	PF00133.17	gi|289597141|ref|YP_003483837.1|	-	2.1e-60	204.3	7.7	4.4e-58	196.7	5.3	3.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|289597141|ref|YP_003483837.1|	-	5.6e-24	84.5	1.3	3.3e-11	42.4	0.0	3.5	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|289597141|ref|YP_003483837.1|	-	2.2e-18	66.4	3.0	6.9e-18	64.8	2.1	1.9	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|289597141|ref|YP_003483837.1|	-	2.4e-09	36.7	0.1	8.1e-09	35.0	0.0	1.8	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|289597141|ref|YP_003483837.1|	-	8.9e-07	28.3	1.8	0.039	13.0	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1d	PF00750.14	gi|289597141|ref|YP_003483837.1|	-	4.4e-05	22.4	0.0	0.00032	19.6	0.0	2.3	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(R)
DctM	PF06808.7	gi|289597142|ref|YP_003483838.1|	-	6.4e-78	262.1	56.7	7.9e-53	179.4	21.7	3.0	3	1	1	4	4	4	2	DctM-like	transporters
Syndecan	PF01034.15	gi|289597142|ref|YP_003483838.1|	-	1.2	8.8	7.3	6	6.5	0.1	4.3	3	0	0	3	3	3	0	Syndecan	domain
DUF1850	PF08905.6	gi|289597143|ref|YP_003483839.1|	-	1.1e-11	44.3	0.0	2e-11	43.5	0.0	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1850)
NMT1	PF09084.6	gi|289597144|ref|YP_003483840.1|	-	8e-23	81.1	5.7	3.3e-11	43.2	0.4	2.5	2	1	0	2	2	2	2	NMT1/THI5	like
Phosphonate-bd	PF12974.2	gi|289597144|ref|YP_003483840.1|	-	2.4e-11	43.4	13.4	5.3e-05	22.7	0.3	4.2	3	1	0	4	4	4	2	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.15	gi|289597144|ref|YP_003483840.1|	-	2.8e-08	33.3	16.3	0.00015	21.1	0.3	3.9	2	2	2	4	4	4	2	Bacterial	extracellular	solute-binding	proteins,	family	3
DUF4012	PF13196.1	gi|289597144|ref|YP_003483840.1|	-	0.0027	17.8	0.1	1	9.4	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF4012)
DUF4431	PF14485.1	gi|289597144|ref|YP_003483840.1|	-	0.028	14.0	0.1	11	5.7	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4431)
Gag_p19	PF02228.11	gi|289597144|ref|YP_003483840.1|	-	0.057	13.7	0.2	20	5.5	0.0	2.5	2	0	0	2	2	2	0	Major	core	protein	p19
Flavoprotein	PF02441.14	gi|289597144|ref|YP_003483840.1|	-	5.5	6.6	7.9	10	5.8	0.1	3.5	5	0	0	5	5	5	0	Flavoprotein
Cellulase	PF00150.13	gi|289597145|ref|YP_003483841.1|	-	8.1e-14	51.4	4.0	8.9e-14	51.3	2.2	1.5	1	1	1	2	2	2	1	Cellulase	(glycosyl	hydrolase	family	5)
Mycobact_memb	PF05423.8	gi|289597145|ref|YP_003483841.1|	-	0.018	14.7	0.1	0.018	14.7	0.0	2.3	2	0	0	2	2	2	0	Mycobacterium	membrane	protein
Ribosomal_L18e	PF00828.14	gi|289597146|ref|YP_003483842.1|	-	1.2e-17	64.5	0.2	1.6e-17	64.0	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L13	PF00572.13	gi|289597147|ref|YP_003483843.1|	-	1.5e-25	89.7	0.3	1.8e-25	89.4	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.14	gi|289597148|ref|YP_003483844.1|	-	1.5e-35	122.1	1.4	1.7e-35	121.9	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
RNA_pol_N	PF01194.12	gi|289597149|ref|YP_003483845.1|	-	1.1e-23	83.0	0.7	1.3e-23	82.7	0.5	1.1	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
YccV-like	PF08755.6	gi|289597149|ref|YP_003483845.1|	-	0.09	12.7	0.0	0.11	12.4	0.0	1.1	1	0	0	1	1	1	0	Hemimethylated	DNA-binding	protein	YccV	like
MutS_V	PF00488.16	gi|289597150|ref|YP_003483846.1|	-	4.2e-102	340.5	0.3	8e-102	339.6	0.1	1.6	2	0	0	2	2	2	1	MutS	domain	V
MutS_III	PF05192.13	gi|289597150|ref|YP_003483846.1|	-	8.1e-46	156.3	1.8	1e-45	156.0	0.5	1.7	2	0	0	2	2	2	1	MutS	domain	III
MutS_I	PF01624.15	gi|289597150|ref|YP_003483846.1|	-	3.4e-45	152.7	0.0	1.2e-44	150.9	0.0	2.0	2	0	0	2	2	2	1	MutS	domain	I
MutS_IV	PF05190.13	gi|289597150|ref|YP_003483846.1|	-	1.8e-28	98.5	3.5	1.8e-28	98.5	2.4	2.5	2	0	0	2	2	2	1	MutS	family	domain	IV
MutS_II	PF05188.12	gi|289597150|ref|YP_003483846.1|	-	3.8e-16	59.3	0.8	1.9e-15	57.1	0.2	2.5	2	1	0	2	2	2	1	MutS	domain	II
FtsK_SpoIIIE	PF01580.13	gi|289597150|ref|YP_003483846.1|	-	0.031	13.7	0.0	1.3	8.4	0.0	3.0	1	1	1	3	3	3	0	FtsK/SpoIIIE	family
AAA_14	PF13173.1	gi|289597150|ref|YP_003483846.1|	-	0.054	13.3	3.7	0.19	11.6	0.0	3.6	4	1	0	4	4	4	0	AAA	domain
AAA_29	PF13555.1	gi|289597150|ref|YP_003483846.1|	-	0.088	12.3	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|289597150|ref|YP_003483846.1|	-	0.63	10.8	5.8	3.2	8.6	0.0	3.9	4	2	0	4	4	4	0	AAA	domain
AAA_23	PF13476.1	gi|289597150|ref|YP_003483846.1|	-	1.5	9.0	0.0	1.5	9.0	0.0	4.3	3	1	0	3	3	3	0	AAA	domain
DUF3242	PF11586.3	gi|289597152|ref|YP_003483848.1|	-	0.039	13.4	1.0	0.052	13.0	0.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3242)
Pex24p	PF06398.6	gi|289597152|ref|YP_003483848.1|	-	3.9	6.1	6.9	6.1	5.5	4.8	1.6	1	1	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
EamA	PF00892.15	gi|289597152|ref|YP_003483848.1|	-	5.3	7.1	11.4	0.55	10.2	3.7	1.9	1	1	1	2	2	2	0	EamA-like	transporter	family
Flavi_NS2A	PF01005.14	gi|289597153|ref|YP_003483849.1|	-	0.0023	17.2	2.8	0.0023	17.2	1.9	2.6	3	0	0	3	3	3	1	Flavivirus	non-structural	protein	NS2A
TMEM173	PF15009.1	gi|289597153|ref|YP_003483849.1|	-	2	7.1	9.1	1.7	7.3	1.9	2.3	2	0	0	2	2	2	0	Transmembrane	protein	173
Big_3_4	PF13754.1	gi|289597154|ref|YP_003483850.1|	-	1.9e-07	31.2	8.0	5.8	7.3	0.0	6.9	6	0	0	6	6	6	4	Bacterial	Ig-like	domain	(group	3)
FtsX	PF02687.16	gi|289597154|ref|YP_003483850.1|	-	5.3e-06	26.2	19.1	5.3e-06	26.2	13.3	2.1	2	0	0	2	2	2	1	FtsX-like	permease	family
PKD	PF00801.15	gi|289597154|ref|YP_003483850.1|	-	0.056	13.1	1.8	14	5.5	0.3	4.1	5	0	0	5	5	5	0	PKD	domain
FlgD_ig	PF13860.1	gi|289597154|ref|YP_003483850.1|	-	0.11	12.2	1.7	13	5.6	0.0	4.4	4	1	0	4	4	4	0	FlgD	Ig-like	domain
FtsX	PF02687.16	gi|289597155|ref|YP_003483851.1|	-	4.5e-10	39.3	21.1	4.5e-10	39.3	14.6	2.6	3	0	0	3	3	3	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|289597155|ref|YP_003483851.1|	-	0.0017	17.9	0.1	0.0017	17.9	0.1	2.0	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
ABC_tran	PF00005.22	gi|289597156|ref|YP_003483852.1|	-	2.2e-31	108.9	0.1	2.9e-31	108.5	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|289597156|ref|YP_003483852.1|	-	1.1e-10	41.9	2.5	1.5e-08	34.9	1.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|289597156|ref|YP_003483852.1|	-	8e-06	25.1	9.0	8.8e-05	21.7	0.2	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|289597156|ref|YP_003483852.1|	-	1e-05	24.8	1.3	3.4e-05	23.1	0.9	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|289597156|ref|YP_003483852.1|	-	0.00045	20.3	0.6	1.1	9.4	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
SbcCD_C	PF13558.1	gi|289597156|ref|YP_003483852.1|	-	0.0013	18.6	0.1	0.0063	16.3	0.1	2.0	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|289597156|ref|YP_003483852.1|	-	0.0019	17.4	0.0	0.0032	16.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|289597156|ref|YP_003483852.1|	-	0.004	17.4	2.7	1.4	9.1	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
Septin	PF00735.13	gi|289597156|ref|YP_003483852.1|	-	0.0067	15.4	0.5	0.019	13.9	0.0	1.9	2	0	0	2	2	2	1	Septin
NACHT	PF05729.7	gi|289597156|ref|YP_003483852.1|	-	0.0098	15.5	0.0	0.019	14.6	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
UPF0079	PF02367.12	gi|289597156|ref|YP_003483852.1|	-	0.024	14.2	0.0	0.038	13.6	0.0	1.5	1	1	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_17	PF13207.1	gi|289597156|ref|YP_003483852.1|	-	0.026	15.3	0.2	0.041	14.6	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|289597156|ref|YP_003483852.1|	-	0.029	12.8	0.1	0.076	11.4	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Epimerase_2	PF02350.14	gi|289597156|ref|YP_003483852.1|	-	0.038	12.7	0.1	0.052	12.3	0.1	1.2	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
AAA_24	PF13479.1	gi|289597156|ref|YP_003483852.1|	-	0.041	13.4	0.1	0.44	10.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
DnaB_C	PF03796.10	gi|289597156|ref|YP_003483852.1|	-	0.058	12.2	0.2	1.5	7.6	0.0	2.1	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
AAA_16	PF13191.1	gi|289597156|ref|YP_003483852.1|	-	0.066	13.2	0.1	0.12	12.3	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|289597156|ref|YP_003483852.1|	-	0.073	12.4	0.0	0.42	9.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
DUF2326	PF10088.4	gi|289597156|ref|YP_003483852.1|	-	0.074	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2326)
AAA_29	PF13555.1	gi|289597156|ref|YP_003483852.1|	-	0.096	12.2	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|289597156|ref|YP_003483852.1|	-	0.11	12.3	0.6	0.32	10.9	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|289597156|ref|YP_003483852.1|	-	0.12	12.2	0.0	0.29	11.0	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289597156|ref|YP_003483852.1|	-	0.13	11.6	0.4	2.7	7.3	0.1	2.1	1	1	1	2	2	2	0	AAA-like	domain
AAA_23	PF13476.1	gi|289597156|ref|YP_003483852.1|	-	2.3	8.5	5.4	11	6.2	3.7	2.1	1	1	0	1	1	1	0	AAA	domain
DUF1616	PF07760.6	gi|289597157|ref|YP_003483853.1|	-	0.039	13.0	24.5	5.7	5.9	16.9	2.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1616)
TMEM238	PF15125.1	gi|289597157|ref|YP_003483853.1|	-	0.074	12.9	7.4	0.18	11.7	1.0	2.7	2	0	0	2	2	2	0	TMEM238	protein	family
DUF4131	PF13567.1	gi|289597157|ref|YP_003483853.1|	-	6.8	6.0	13.1	0.24	10.8	0.9	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
MgtE	PF01769.11	gi|289597158|ref|YP_003483854.1|	-	3.3e-37	127.7	21.9	2.4e-20	73.1	4.5	2.6	3	0	0	3	3	3	2	Divalent	cation	transporter
RNA_pol_Rpc34	PF05158.7	gi|289597159|ref|YP_003483855.1|	-	0.00075	18.7	0.1	0.0011	18.1	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
RPA_C	PF08784.6	gi|289597159|ref|YP_003483855.1|	-	0.00075	19.8	0.0	0.0016	18.8	0.0	1.5	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
AIG1	PF04548.11	gi|289597159|ref|YP_003483855.1|	-	0.014	14.5	0.2	0.02	13.9	0.1	1.2	1	0	0	1	1	1	0	AIG1	family
Sigma54_CBD	PF04963.8	gi|289597159|ref|YP_003483855.1|	-	0.017	14.5	2.6	0.23	10.8	0.5	2.2	1	1	1	2	2	2	0	Sigma-54	factor,	core	binding	domain
tRNA_anti-codon	PF01336.20	gi|289597159|ref|YP_003483855.1|	-	0.093	12.6	0.1	0.17	11.7	0.1	1.4	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
PCI	PF01399.22	gi|289597159|ref|YP_003483855.1|	-	0.22	11.8	1.7	74	3.7	0.0	3.7	3	1	0	3	3	3	0	PCI	domain
tRNA_anti-codon	PF01336.20	gi|289597160|ref|YP_003483856.1|	-	7.5e-10	38.5	6.5	0.00098	18.9	0.1	3.9	4	0	0	4	4	4	3	OB-fold	nucleic	acid	binding	domain
DUF164	PF02591.10	gi|289597160|ref|YP_003483856.1|	-	0.01	15.6	0.0	0.021	14.6	0.0	1.5	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
Bac_DNA_binding	PF00216.16	gi|289597161|ref|YP_003483857.1|	-	0.00042	20.2	0.1	0.00097	19.1	0.1	1.6	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
PAS_7	PF12860.2	gi|289597161|ref|YP_003483857.1|	-	0.029	14.3	0.0	0.057	13.4	0.0	1.5	1	0	0	1	1	1	0	PAS	fold
SMK-1	PF04802.10	gi|289597161|ref|YP_003483857.1|	-	0.035	13.6	0.1	0.061	12.8	0.1	1.4	1	0	0	1	1	1	0	Component	of	IIS	longevity	pathway	SMK-1
MazG-like	PF12643.2	gi|289597161|ref|YP_003483857.1|	-	0.11	12.3	0.8	1.7	8.6	0.1	2.6	1	1	1	2	2	2	0	MazG-like	family
Rep_fac_C	PF08542.6	gi|289597161|ref|YP_003483857.1|	-	0.15	12.0	0.3	1.4	8.9	0.0	2.4	2	1	0	2	2	2	0	Replication	factor	C	C-terminal	domain
RDD	PF06271.7	gi|289597162|ref|YP_003483858.1|	-	4e-12	46.2	9.1	5.4e-12	45.7	6.3	1.3	1	1	0	1	1	1	1	RDD	family
HTH_20	PF12840.2	gi|289597163|ref|YP_003483859.1|	-	2.3e-09	36.9	0.2	3.6e-09	36.2	0.2	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|289597163|ref|YP_003483859.1|	-	1.2e-07	31.2	0.6	2.5e-07	30.2	0.4	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|289597163|ref|YP_003483859.1|	-	0.0016	18.0	0.7	0.0016	18.0	0.5	2.0	2	1	0	2	2	2	1	HTH	domain
PadR	PF03551.9	gi|289597163|ref|YP_003483859.1|	-	0.03	14.0	0.1	0.11	12.3	0.1	2.0	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|289597163|ref|YP_003483859.1|	-	0.033	13.8	0.1	0.074	12.7	0.1	1.7	1	0	0	1	1	1	0	MarR	family
HxlR	PF01638.12	gi|289597163|ref|YP_003483859.1|	-	0.091	12.4	1.0	0.12	11.9	0.1	1.8	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
HDV_ag	PF01517.13	gi|289597163|ref|YP_003483859.1|	-	0.11	12.1	0.1	0.11	12.1	0.1	1.9	2	0	0	2	2	2	0	Hepatitis	delta	virus	delta	antigen
DUF4423	PF14394.1	gi|289597163|ref|YP_003483859.1|	-	0.13	11.8	0.3	0.13	11.8	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF1492	PF07374.6	gi|289597163|ref|YP_003483859.1|	-	0.27	11.3	4.6	9	6.4	1.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1492)
SpoU_sub_bind	PF08032.7	gi|289597163|ref|YP_003483859.1|	-	1.5	9.0	4.3	1.4	9.1	0.7	2.2	2	0	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
DUF3811	PF11656.3	gi|289597163|ref|YP_003483859.1|	-	2.4	8.2	5.2	1.2	9.3	0.1	2.3	2	1	0	2	2	2	0	YjbD	family	(DUF3811)
CorA	PF01544.13	gi|289597163|ref|YP_003483859.1|	-	5.7	5.8	8.9	2.9	6.8	1.0	2.1	1	1	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
HSP20	PF00011.16	gi|289597164|ref|YP_003483860.1|	-	1.9e-11	43.7	4.1	1.3e-09	37.7	2.8	2.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|289597164|ref|YP_003483860.1|	-	0.00011	22.6	0.2	0.00019	21.8	0.2	1.3	1	0	0	1	1	1	1	CS	domain
PIH1	PF08190.7	gi|289597164|ref|YP_003483860.1|	-	0.019	14.4	0.0	0.026	13.9	0.0	1.1	1	0	0	1	1	1	0	pre-RNA	processing	PIH1/Nop17
DUF401	PF04165.7	gi|289597165|ref|YP_003483861.1|	-	2.9e-69	233.9	39.2	4.2e-69	233.4	27.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF401)
DUF969	PF06149.7	gi|289597165|ref|YP_003483861.1|	-	0.18	11.0	12.9	0.036	13.3	6.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF969)
TruB_N	PF01509.13	gi|289597166|ref|YP_003483862.1|	-	2.9e-27	95.6	0.4	1.2e-16	61.2	0.1	3.1	1	1	1	2	2	2	2	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
PUA	PF01472.15	gi|289597166|ref|YP_003483862.1|	-	3.8e-10	39.3	0.2	3.6e-09	36.2	0.0	2.4	2	0	0	2	2	2	1	PUA	domain
DKCLD	PF08068.7	gi|289597166|ref|YP_003483862.1|	-	5.2e-09	35.9	0.0	1.5e-08	34.4	0.0	1.8	2	0	0	2	2	2	1	DKCLD	(NUC011)	domain
Cytidylate_kin2	PF13189.1	gi|289597167|ref|YP_003483863.1|	-	1.3e-21	77.3	0.5	3.4e-20	72.6	0.3	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|289597167|ref|YP_003483863.1|	-	1.6e-21	76.9	0.1	2.5e-21	76.3	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289597167|ref|YP_003483863.1|	-	4.8e-16	59.6	1.2	1.7e-15	57.9	0.1	1.8	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|289597167|ref|YP_003483863.1|	-	3.7e-10	39.8	0.0	8e-10	38.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|289597167|ref|YP_003483863.1|	-	2.9e-08	33.7	0.3	6.5e-08	32.5	0.2	1.5	1	1	0	1	1	1	1	Shikimate	kinase
ADK	PF00406.17	gi|289597167|ref|YP_003483863.1|	-	7e-08	32.4	0.0	1.7e-07	31.1	0.0	1.7	2	0	0	2	2	1	1	Adenylate	kinase
AAA_28	PF13521.1	gi|289597167|ref|YP_003483863.1|	-	7.8e-07	29.1	0.0	9.6e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|289597167|ref|YP_003483863.1|	-	5.1e-06	26.7	0.0	7.3e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|289597167|ref|YP_003483863.1|	-	3.3e-05	22.7	0.0	4.6e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
CoaE	PF01121.15	gi|289597167|ref|YP_003483863.1|	-	0.00012	21.5	0.0	0.0048	16.3	0.0	2.3	1	1	1	2	2	2	1	Dephospho-CoA	kinase
AAA_14	PF13173.1	gi|289597167|ref|YP_003483863.1|	-	0.00045	20.1	0.2	0.0037	17.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|289597167|ref|YP_003483863.1|	-	0.00094	18.2	0.0	0.0014	17.6	0.0	1.2	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_19	PF13245.1	gi|289597167|ref|YP_003483863.1|	-	0.0012	18.6	0.1	0.0019	17.9	0.0	1.3	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_24	PF13479.1	gi|289597167|ref|YP_003483863.1|	-	0.0024	17.4	0.0	0.0032	17.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|289597167|ref|YP_003483863.1|	-	0.0034	16.6	0.2	0.0066	15.6	0.1	1.6	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
RNA_helicase	PF00910.17	gi|289597167|ref|YP_003483863.1|	-	0.0034	17.5	0.1	0.007	16.5	0.0	1.6	2	0	0	2	2	1	1	RNA	helicase
Zeta_toxin	PF06414.7	gi|289597167|ref|YP_003483863.1|	-	0.0038	16.3	0.1	0.013	14.6	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
Cytidylate_kin	PF02224.13	gi|289597167|ref|YP_003483863.1|	-	0.0039	16.6	0.0	0.0057	16.1	0.0	1.3	1	0	0	1	1	1	1	Cytidylate	kinase
NTPase_1	PF03266.10	gi|289597167|ref|YP_003483863.1|	-	0.0041	16.8	0.2	0.0088	15.7	0.0	1.6	2	0	0	2	2	1	1	NTPase
ABC_tran	PF00005.22	gi|289597167|ref|YP_003483863.1|	-	0.0052	17.0	0.1	0.0083	16.4	0.1	1.4	1	1	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.1	gi|289597167|ref|YP_003483863.1|	-	0.0062	16.6	0.0	0.0099	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|289597167|ref|YP_003483863.1|	-	0.014	15.4	0.0	0.066	13.2	0.0	2.0	1	1	2	3	3	3	0	Sigma-54	interaction	domain
PRK	PF00485.13	gi|289597167|ref|YP_003483863.1|	-	0.014	14.9	0.2	0.12	11.8	0.0	2.1	1	1	1	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_5	PF07728.9	gi|289597167|ref|YP_003483863.1|	-	0.014	15.0	0.0	0.028	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|289597167|ref|YP_003483863.1|	-	0.015	13.9	0.0	0.026	13.2	0.0	1.4	1	0	0	1	1	1	0	TIP49	C-terminus
Zot	PF05707.7	gi|289597167|ref|YP_003483863.1|	-	0.025	14.0	0.0	0.043	13.2	0.0	1.4	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
Thymidylate_kin	PF02223.12	gi|289597167|ref|YP_003483863.1|	-	0.028	13.7	0.6	0.27	10.5	0.1	2.4	1	1	1	2	2	2	0	Thymidylate	kinase
AAA_2	PF07724.9	gi|289597167|ref|YP_003483863.1|	-	0.029	14.2	0.0	0.051	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|289597167|ref|YP_003483863.1|	-	0.03	14.3	0.0	0.038	13.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
APS_kinase	PF01583.15	gi|289597167|ref|YP_003483863.1|	-	0.041	13.5	0.0	0.098	12.3	0.0	1.7	2	0	0	2	2	2	0	Adenylylsulphate	kinase
SRP54	PF00448.17	gi|289597167|ref|YP_003483863.1|	-	0.042	13.2	0.0	0.057	12.8	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
T2SE	PF00437.15	gi|289597167|ref|YP_003483863.1|	-	0.046	12.6	0.4	0.097	11.5	0.2	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|289597167|ref|YP_003483863.1|	-	0.086	13.1	1.9	0.15	12.4	1.3	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|289597167|ref|YP_003483863.1|	-	0.088	12.3	0.0	0.097	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|289597167|ref|YP_003483863.1|	-	0.097	12.1	0.3	0.16	11.4	0.0	1.5	2	0	0	2	2	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Mg_chelatase	PF01078.16	gi|289597167|ref|YP_003483863.1|	-	0.1	11.7	0.1	0.18	10.9	0.1	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MobB	PF03205.9	gi|289597167|ref|YP_003483863.1|	-	0.13	11.9	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CPT	PF07931.7	gi|289597167|ref|YP_003483863.1|	-	0.14	11.7	0.1	2.1	7.9	0.0	2.3	1	1	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
NACHT	PF05729.7	gi|289597167|ref|YP_003483863.1|	-	0.15	11.7	0.2	0.23	11.1	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
DUF87	PF01935.12	gi|289597167|ref|YP_003483863.1|	-	0.83	9.4	5.7	16	5.2	0.7	3.1	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_21	PF13304.1	gi|289597167|ref|YP_003483863.1|	-	1.5	8.7	7.6	4	7.3	5.3	1.8	1	1	0	1	1	1	0	AAA	domain
DUF106	PF01956.11	gi|289597168|ref|YP_003483864.1|	-	3e-15	56.1	12.6	3e-15	56.1	8.8	1.9	2	0	0	2	2	2	1	Integral	membrane	protein	DUF106
DUF241	PF03087.9	gi|289597168|ref|YP_003483864.1|	-	0.021	14.3	4.5	0.059	12.8	3.1	1.7	1	1	0	1	1	1	0	Arabidopsis	protein	of	unknown	function
DUF2208	PF09973.4	gi|289597168|ref|YP_003483864.1|	-	0.18	11.0	16.6	0.048	12.8	4.3	2.2	1	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2208)
TauE	PF01925.14	gi|289597168|ref|YP_003483864.1|	-	6.5	6.1	9.5	0.15	11.4	0.6	2.1	2	1	0	2	2	2	0	Sulfite	exporter	TauE/SafE
AAA_18	PF13238.1	gi|289597169|ref|YP_003483865.1|	-	3.2e-13	50.0	0.0	4.3e-13	49.7	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|289597169|ref|YP_003483865.1|	-	2.7e-08	34.6	0.0	3.6e-08	34.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|289597169|ref|YP_003483865.1|	-	2.6e-07	30.5	0.0	4.6e-07	29.8	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|289597169|ref|YP_003483865.1|	-	0.0001	22.3	0.1	0.0002	21.3	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|289597169|ref|YP_003483865.1|	-	0.0003	20.7	0.1	0.0013	18.6	0.1	2.1	1	1	0	1	1	1	1	Shikimate	kinase
AAA_16	PF13191.1	gi|289597169|ref|YP_003483865.1|	-	0.0016	18.4	0.0	0.0019	18.1	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|289597169|ref|YP_003483865.1|	-	0.0022	18.1	0.0	0.0042	17.2	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.13	gi|289597169|ref|YP_003483865.1|	-	0.0074	15.8	0.0	0.036	13.6	0.0	1.9	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
DUF2075	PF09848.4	gi|289597169|ref|YP_003483865.1|	-	0.016	14.2	0.0	0.019	13.9	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
FeoB_N	PF02421.13	gi|289597169|ref|YP_003483865.1|	-	0.042	13.1	0.0	0.065	12.5	0.0	1.4	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|289597169|ref|YP_003483865.1|	-	0.05	14.0	0.0	0.089	13.2	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
Zeta_toxin	PF06414.7	gi|289597169|ref|YP_003483865.1|	-	0.058	12.4	0.0	0.1	11.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
MMR_HSR1	PF01926.18	gi|289597169|ref|YP_003483865.1|	-	0.064	13.2	0.1	0.11	12.4	0.1	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
CSF-1	PF05337.6	gi|289597169|ref|YP_003483865.1|	-	0.16	11.2	0.0	0.19	11.0	0.0	1.1	1	0	0	1	1	1	0	Macrophage	colony	stimulating	factor-1	(CSF-1)
SecY	PF00344.15	gi|289597170|ref|YP_003483866.1|	-	1.8e-94	316.5	22.9	1.8e-94	316.5	15.9	1.6	2	0	0	2	2	2	1	SecY	translocase
Plug_translocon	PF10559.4	gi|289597170|ref|YP_003483866.1|	-	3.1e-10	39.3	1.9	9.1e-10	37.8	0.4	2.5	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Phage_holin_5	PF06946.6	gi|289597170|ref|YP_003483866.1|	-	0.02	15.0	0.2	0.02	15.0	0.1	2.5	3	0	0	3	3	3	0	Phage	holin
Ribosomal_L18e	PF00828.14	gi|289597171|ref|YP_003483867.1|	-	1.6e-26	93.2	1.6	2e-26	92.8	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|289597172|ref|YP_003483868.1|	-	4.6e-21	74.1	0.3	1.2e-20	72.8	0.2	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5	PF00333.15	gi|289597173|ref|YP_003483869.1|	-	2e-25	88.3	5.5	3.9e-25	87.3	3.8	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.10	gi|289597173|ref|YP_003483869.1|	-	6.4e-23	79.8	0.5	1.2e-22	78.9	0.4	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L18p	PF00861.17	gi|289597174|ref|YP_003483870.1|	-	6e-34	116.7	0.2	7.4e-34	116.5	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L19e	PF01280.15	gi|289597175|ref|YP_003483871.1|	-	6.1e-57	191.5	11.8	6.8e-57	191.3	8.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Ribosomal_L32e	PF01655.13	gi|289597176|ref|YP_003483872.1|	-	1.9e-41	140.5	3.2	2.4e-41	140.2	2.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.18	gi|289597177|ref|YP_003483873.1|	-	6.5e-28	97.0	3.1	2.5e-17	63.1	0.1	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
HSP20	PF00011.16	gi|289597177|ref|YP_003483873.1|	-	0.097	12.5	0.3	8.3	6.3	0.0	3.1	3	1	1	4	4	4	0	Hsp20/alpha	crystallin	family
YabP	PF07873.6	gi|289597177|ref|YP_003483873.1|	-	0.76	9.3	3.6	9.7	5.8	0.2	3.3	2	2	2	4	4	4	0	YabP	family
Ribosomal_S8	PF00410.14	gi|289597178|ref|YP_003483874.1|	-	3.2e-28	98.1	0.0	5e-28	97.5	0.0	1.3	1	1	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.16	gi|289597179|ref|YP_003483875.1|	-	1.6e-17	62.6	10.3	1.8e-17	62.4	7.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
DUF2039	PF10217.4	gi|289597179|ref|YP_003483875.1|	-	0.34	10.9	1.9	1.3	9.0	1.3	1.7	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
Ribosomal_L5_C	PF00673.16	gi|289597180|ref|YP_003483876.1|	-	2.9e-26	91.0	0.0	4.7e-26	90.3	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|289597180|ref|YP_003483876.1|	-	5.9e-17	61.1	0.4	1.1e-16	60.2	0.1	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L5
CBFB_NFYA	PF02045.10	gi|289597180|ref|YP_003483876.1|	-	0.094	13.2	3.0	0.22	12.0	2.1	1.6	1	0	0	1	1	1	0	CCAAT-binding	transcription	factor	(CBF-B/NF-YA)	subunit	B
Ribosomal_S4e	PF00900.15	gi|289597181|ref|YP_003483877.1|	-	1.1e-30	105.0	0.3	2.1e-30	104.1	0.2	1.5	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.7	gi|289597181|ref|YP_003483877.1|	-	1.3e-13	50.4	3.8	2.7e-13	49.5	2.6	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.20	gi|289597181|ref|YP_003483877.1|	-	1.7e-10	40.1	0.8	3.8e-10	39.0	0.5	1.7	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.24	gi|289597181|ref|YP_003483877.1|	-	0.062	13.0	0.9	0.062	13.0	0.6	2.4	2	0	0	2	2	2	0	KOW	motif
KOW	PF00467.24	gi|289597182|ref|YP_003483878.1|	-	9.8e-08	31.4	6.4	1.7e-07	30.6	4.4	1.4	1	0	0	1	1	1	1	KOW	motif
RNA_pol_Rpb5_C	PF01191.14	gi|289597182|ref|YP_003483878.1|	-	0.15	11.6	1.1	1.2	8.7	0.1	2.5	1	1	1	2	2	2	0	RNA	polymerase	Rpb5,	C-terminal	domain
DUF2457	PF10446.4	gi|289597182|ref|YP_003483878.1|	-	0.32	9.6	11.2	0.52	8.9	7.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2457)
AF1Q	PF15017.1	gi|289597182|ref|YP_003483878.1|	-	0.73	9.7	9.4	7.9	6.4	0.0	2.3	2	0	0	2	2	2	0	Drug	resistance	and	apoptosis	regulator
Ribosomal_L14	PF00238.14	gi|289597183|ref|YP_003483879.1|	-	4.9e-38	129.6	0.0	5.5e-38	129.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
EutN_CcmL	PF03319.8	gi|289597183|ref|YP_003483879.1|	-	0.033	14.5	0.8	0.098	13.0	0.1	2.1	2	1	1	3	3	3	0	Ethanolamine	utilisation	protein	EutN/carboxysome
Ribosomal_S17	PF00366.15	gi|289597184|ref|YP_003483880.1|	-	2.4e-28	97.9	3.7	3e-28	97.6	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
zf-C3H1	PF10650.4	gi|289597184|ref|YP_003483880.1|	-	0.43	10.0	2.6	0.72	9.3	1.8	1.3	1	0	0	1	1	1	0	Putative	zinc-finger	domain
UPF0086	PF01868.11	gi|289597185|ref|YP_003483881.1|	-	9.4e-24	82.8	0.1	1e-23	82.7	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
DUF2111	PF09884.4	gi|289597185|ref|YP_003483881.1|	-	0.024	14.4	0.1	0.031	14.1	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
Ribosomal_L29	PF00831.18	gi|289597186|ref|YP_003483882.1|	-	3.6e-17	61.8	0.1	4.3e-17	61.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
HRDC	PF00570.18	gi|289597186|ref|YP_003483882.1|	-	0.046	13.4	1.0	0.77	9.5	0.2	2.3	2	0	0	2	2	2	0	HRDC	domain
CSTF_C	PF14304.1	gi|289597186|ref|YP_003483882.1|	-	0.64	9.3	4.6	4.7	6.5	0.8	2.1	2	0	0	2	2	2	0	Transcription	termination	and	cleavage	factor	C-terminal
Ribosomal_S3_C	PF00189.15	gi|289597187|ref|YP_003483883.1|	-	3.1e-18	65.7	0.5	7.2e-18	64.5	0.4	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|289597187|ref|YP_003483883.1|	-	1.7e-14	53.0	0.2	4.4e-14	51.8	0.2	1.7	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|289597187|ref|YP_003483883.1|	-	0.00035	20.1	0.3	0.0032	17.0	0.0	2.4	2	0	0	2	2	2	1	KH	domain
KH_3	PF13014.1	gi|289597187|ref|YP_003483883.1|	-	0.016	14.8	2.7	0.04	13.5	0.1	2.9	3	1	0	3	3	3	0	KH	domain
Ribosomal_L22	PF00237.14	gi|289597188|ref|YP_003483884.1|	-	6.9e-33	112.7	0.1	9.2e-33	112.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_L12	PF00542.14	gi|289597188|ref|YP_003483884.1|	-	0.086	12.8	0.3	0.48	10.4	0.0	2.2	2	0	0	2	2	2	0	Ribosomal	protein	L7/L12	C-terminal	domain
Ribosomal_S19	PF00203.16	gi|289597189|ref|YP_003483885.1|	-	1.1e-26	92.2	0.5	1.1e-26	92.2	0.4	1.6	2	0	0	2	2	2	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.13	gi|289597190|ref|YP_003483886.1|	-	4.1e-44	149.5	1.6	6e-44	148.9	1.1	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|289597190|ref|YP_003483886.1|	-	2.8e-12	46.4	0.0	6.3e-12	45.2	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|289597191|ref|YP_003483887.1|	-	8.2e-18	64.1	6.8	3.7e-17	62.0	4.7	1.8	1	1	0	1	1	1	1	Ribosomal	protein	L23
Ribosomal_L4	PF00573.17	gi|289597192|ref|YP_003483888.1|	-	1.5e-36	125.5	0.3	1.8e-36	125.3	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.17	gi|289597193|ref|YP_003483889.1|	-	2e-75	253.5	0.4	2.4e-75	253.3	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L3
Urocanase	PF01175.13	gi|289597194|ref|YP_003483890.1|	-	6.4e-274	909.0	0.0	7.2e-274	908.8	0.0	1.0	1	0	0	1	1	1	1	Urocanase
DUF896	PF05979.7	gi|289597194|ref|YP_003483890.1|	-	0.13	11.9	0.0	0.35	10.5	0.0	1.7	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF896)
CRS1_YhbY	PF01985.16	gi|289597195|ref|YP_003483891.1|	-	4.2e-18	65.1	3.1	4.5e-18	65.0	2.1	1.0	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF3811	PF11656.3	gi|289597195|ref|YP_003483891.1|	-	0.0074	16.3	0.9	0.0076	16.2	0.7	1.1	1	0	0	1	1	1	1	YjbD	family	(DUF3811)
SbcD_C	PF12320.3	gi|289597195|ref|YP_003483891.1|	-	0.0081	16.1	0.1	0.0096	15.9	0.0	1.1	1	0	0	1	1	1	1	Type	5	capsule	protein	repressor	C-terminal	domain
zf-CHC2	PF01807.15	gi|289597195|ref|YP_003483891.1|	-	0.029	13.9	0.2	0.045	13.3	0.1	1.3	1	1	0	1	1	1	0	CHC2	zinc	finger
DUF1638	PF07796.6	gi|289597195|ref|YP_003483891.1|	-	0.035	13.7	0.0	0.036	13.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1638)
Cas_APE2256	PF09651.5	gi|289597195|ref|YP_003483891.1|	-	0.047	13.3	0.2	0.055	13.1	0.1	1.1	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
FMN_bind	PF04205.9	gi|289597195|ref|YP_003483891.1|	-	0.13	12.3	0.6	0.21	11.7	0.4	1.5	1	1	0	1	1	1	0	FMN-binding	domain
RHD	PF00554.17	gi|289597195|ref|YP_003483891.1|	-	0.15	11.7	1.0	0.14	11.8	0.7	1.0	1	0	0	1	1	1	0	Rel	homology	domain	(RHD)
HIT	PF01230.18	gi|289597196|ref|YP_003483892.1|	-	1.4e-13	51.1	0.0	2.5e-13	50.3	0.0	1.4	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|289597196|ref|YP_003483892.1|	-	2.2e-10	40.7	0.0	3.5e-10	40.1	0.0	1.3	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|289597196|ref|YP_003483892.1|	-	2.2e-08	33.7	0.1	3.4e-08	33.1	0.0	1.4	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
PseudoU_synth_1	PF01416.15	gi|289597197|ref|YP_003483893.1|	-	7.2e-19	68.1	0.1	4.1e-08	33.5	0.0	3.0	2	2	0	2	2	2	2	tRNA	pseudouridine	synthase
HTH_5	PF01022.15	gi|289597198|ref|YP_003483894.1|	-	3.3e-11	42.6	0.1	1.3e-10	40.7	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|289597198|ref|YP_003483894.1|	-	9.5e-10	38.1	0.0	2.6e-09	36.7	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|289597198|ref|YP_003483894.1|	-	6.9e-08	31.7	0.1	6.9e-08	31.7	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|289597198|ref|YP_003483894.1|	-	2.3e-07	30.4	0.1	6.9e-07	28.8	0.1	1.8	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|289597198|ref|YP_003483894.1|	-	4.3e-07	29.4	0.4	4.3e-07	29.4	0.3	2.7	3	0	0	3	3	3	1	HTH	domain
TrmB	PF01978.14	gi|289597198|ref|YP_003483894.1|	-	4.6e-06	26.2	0.0	1.2e-05	24.8	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|289597198|ref|YP_003483894.1|	-	7e-06	25.6	0.0	1.7e-05	24.4	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_38	PF13936.1	gi|289597198|ref|YP_003483894.1|	-	7.8e-06	25.3	0.7	1.9e-05	24.0	0.1	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|289597198|ref|YP_003483894.1|	-	0.00014	21.4	0.0	0.0027	17.2	0.0	2.6	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_34	PF13601.1	gi|289597198|ref|YP_003483894.1|	-	0.00021	21.2	0.2	0.00067	19.6	0.0	2.0	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|289597198|ref|YP_003483894.1|	-	0.00023	21.4	0.0	0.00074	19.7	0.0	1.9	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|289597198|ref|YP_003483894.1|	-	0.00077	19.0	0.3	0.003	17.1	0.0	2.1	3	0	0	3	3	3	1	IclR	helix-turn-helix	domain
HTH_29	PF13551.1	gi|289597198|ref|YP_003483894.1|	-	0.0019	18.3	0.0	0.0038	17.3	0.0	1.5	1	1	0	1	1	1	1	Winged	helix-turn	helix
B-block_TFIIIC	PF04182.7	gi|289597198|ref|YP_003483894.1|	-	0.0019	18.0	0.1	0.0099	15.7	0.0	2.2	2	1	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_28	PF13518.1	gi|289597198|ref|YP_003483894.1|	-	0.0021	18.0	0.0	0.0077	16.2	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|289597198|ref|YP_003483894.1|	-	0.0055	16.8	0.0	0.014	15.4	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
IF2_N	PF04760.10	gi|289597198|ref|YP_003483894.1|	-	0.0063	16.1	0.9	2.9	7.5	0.0	2.8	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
Sigma70_r4_2	PF08281.7	gi|289597198|ref|YP_003483894.1|	-	0.011	15.2	0.1	0.069	12.6	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
Fe_dep_repress	PF01325.14	gi|289597198|ref|YP_003483894.1|	-	0.026	14.4	0.0	0.057	13.3	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|289597198|ref|YP_003483894.1|	-	0.03	14.0	1.2	0.33	10.7	0.0	2.6	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_40	PF14493.1	gi|289597198|ref|YP_003483894.1|	-	0.04	14.1	1.0	0.18	12.0	0.7	2.2	1	1	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|289597198|ref|YP_003483894.1|	-	0.085	12.1	0.0	0.2	11.0	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
UPF0047	PF01894.12	gi|289597199|ref|YP_003483895.1|	-	6.6e-34	116.2	0.0	7.5e-34	116.0	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
DUF2505	PF10698.4	gi|289597199|ref|YP_003483895.1|	-	0.014	14.8	0.0	0.031	13.7	0.0	1.6	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2505)
GYD	PF08734.6	gi|289597200|ref|YP_003483896.1|	-	0.00012	21.6	0.0	0.00014	21.5	0.0	1.1	1	0	0	1	1	1	1	GYD	domain
Glyoxalase_5	PF14696.1	gi|289597200|ref|YP_003483896.1|	-	0.11	12.4	0.0	0.11	12.3	0.0	1.0	1	0	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
Peptidase_S9	PF00326.16	gi|289597201|ref|YP_003483897.1|	-	8e-55	185.3	0.0	1.3e-54	184.6	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S15	PF02129.13	gi|289597201|ref|YP_003483897.1|	-	1.4e-12	47.6	0.1	1.4e-08	34.5	0.1	2.2	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_5	PF12695.2	gi|289597201|ref|YP_003483897.1|	-	1.6e-12	47.3	0.0	2.5e-12	46.7	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
AXE1	PF05448.7	gi|289597201|ref|YP_003483897.1|	-	1.3e-06	27.2	2.5	2.7e-05	22.8	0.3	3.4	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
BAAT_C	PF08840.6	gi|289597201|ref|YP_003483897.1|	-	5e-06	26.3	0.0	0.00047	19.9	0.0	2.4	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_6	PF12697.2	gi|289597201|ref|YP_003483897.1|	-	4.7e-05	23.3	0.0	0.00024	21.0	0.0	1.9	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|289597201|ref|YP_003483897.1|	-	0.00014	21.2	0.0	0.00034	19.9	0.0	1.6	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Esterase	PF00756.15	gi|289597201|ref|YP_003483897.1|	-	0.021	14.2	0.0	0.036	13.4	0.0	1.3	1	0	0	1	1	1	0	Putative	esterase
Abhydrolase_3	PF07859.8	gi|289597201|ref|YP_003483897.1|	-	0.033	13.7	0.0	0.12	11.9	0.0	1.9	1	1	0	1	1	1	0	alpha/beta	hydrolase	fold
DUF2048	PF09752.4	gi|289597201|ref|YP_003483897.1|	-	0.073	11.9	0.0	0.13	11.1	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2048)
DUF1667	PF07892.6	gi|289597202|ref|YP_003483898.1|	-	2.2e-33	113.7	2.7	2.6e-33	113.5	1.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1667)
DUF2404	PF10296.4	gi|289597202|ref|YP_003483898.1|	-	0.14	12.2	0.2	0.2	11.7	0.1	1.3	1	0	0	1	1	1	0	Putative	integral	membrane	protein	conserved	region	(DUF2404)
Pyr_redox_2	PF07992.9	gi|289597203|ref|YP_003483899.1|	-	1.6e-23	83.6	6.4	6.8e-22	78.3	4.4	3.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|289597203|ref|YP_003483899.1|	-	8e-13	48.6	1.6	8.6e-05	22.8	0.1	3.6	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|289597203|ref|YP_003483899.1|	-	1.8e-10	40.2	7.3	4.9e-07	28.9	0.3	4.1	2	2	3	5	5	5	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|289597203|ref|YP_003483899.1|	-	2.5e-10	40.2	0.1	2.9e-05	24.0	0.0	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|289597203|ref|YP_003483899.1|	-	2.9e-10	39.8	0.1	1.5e-09	37.4	0.0	2.1	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|289597203|ref|YP_003483899.1|	-	3.8e-09	36.8	0.2	0.002	18.2	0.1	3.0	2	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|289597203|ref|YP_003483899.1|	-	1.2e-08	34.3	5.4	0.0012	17.7	0.3	4.0	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|289597203|ref|YP_003483899.1|	-	1.2e-08	33.8	5.4	5.2e-07	28.4	0.1	3.8	3	1	1	4	4	4	1	HI0933-like	protein
GIDA	PF01134.17	gi|289597203|ref|YP_003483899.1|	-	3.8e-06	26.0	6.9	6.7e-05	21.9	0.1	3.7	4	1	0	5	5	5	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.12	gi|289597203|ref|YP_003483899.1|	-	3.2e-05	23.1	5.3	0.013	14.5	0.1	2.9	2	1	0	2	2	2	2	Thi4	family
AlaDh_PNT_C	PF01262.16	gi|289597203|ref|YP_003483899.1|	-	0.00019	21.0	0.7	0.068	12.7	0.0	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.14	gi|289597203|ref|YP_003483899.1|	-	0.0005	19.2	0.9	0.095	11.7	0.0	2.3	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|289597203|ref|YP_003483899.1|	-	0.0006	20.0	0.1	0.082	13.1	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|289597203|ref|YP_003483899.1|	-	0.0014	17.5	3.6	0.0088	15.0	0.1	3.2	4	0	0	4	4	4	1	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.14	gi|289597203|ref|YP_003483899.1|	-	0.22	10.6	1.2	3.4	6.8	0.3	2.5	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DAO	PF01266.19	gi|289597204|ref|YP_003483900.1|	-	6.2e-71	239.1	0.0	7.5e-71	238.9	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer2_BFD	PF04324.10	gi|289597204|ref|YP_003483900.1|	-	4.1e-12	45.9	1.2	9.3e-12	44.8	0.8	1.6	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
NAD_binding_8	PF13450.1	gi|289597204|ref|YP_003483900.1|	-	2.6e-07	30.5	0.0	6.2e-07	29.3	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|289597204|ref|YP_003483900.1|	-	6.8e-07	29.6	0.7	0.0019	18.5	0.1	3.1	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|289597204|ref|YP_003483900.1|	-	1.5e-05	24.1	3.1	4.8e-05	22.5	0.1	2.7	3	0	0	3	3	3	1	Thi4	family
TrkA_N	PF02254.13	gi|289597204|ref|YP_003483900.1|	-	5.1e-05	23.2	0.1	0.00018	21.4	0.1	2.0	1	0	0	1	1	1	1	TrkA-N	domain
Pyr_redox_2	PF07992.9	gi|289597204|ref|YP_003483900.1|	-	0.0001	22.2	0.0	0.00046	20.1	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|289597204|ref|YP_003483900.1|	-	0.00016	20.4	0.9	0.12	10.9	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_binding_2	PF00890.19	gi|289597204|ref|YP_003483900.1|	-	0.00027	19.9	0.0	0.083	11.7	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|289597204|ref|YP_003483900.1|	-	0.00095	18.1	0.0	0.0024	16.8	0.0	1.7	2	0	0	2	2	2	1	Lycopene	cyclase	protein
HI0933_like	PF03486.9	gi|289597204|ref|YP_003483900.1|	-	0.0017	16.9	0.0	0.085	11.3	0.0	2.3	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|289597204|ref|YP_003483900.1|	-	0.0024	17.9	0.0	0.032	14.2	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|289597204|ref|YP_003483900.1|	-	0.0036	17.0	0.1	0.0061	16.3	0.0	1.3	1	0	0	1	1	1	1	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|289597204|ref|YP_003483900.1|	-	0.0051	15.9	0.0	0.008	15.2	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
K_oxygenase	PF13434.1	gi|289597204|ref|YP_003483900.1|	-	0.006	15.5	0.0	0.0087	15.0	0.0	1.2	1	0	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Saccharop_dh	PF03435.13	gi|289597204|ref|YP_003483900.1|	-	0.025	13.5	0.1	0.042	12.8	0.1	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
Shikimate_DH	PF01488.15	gi|289597204|ref|YP_003483900.1|	-	0.039	14.0	0.1	0.077	13.1	0.1	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
FKBP_C	PF00254.23	gi|289597205|ref|YP_003483901.1|	-	1.7e-15	56.7	0.0	3.9e-15	55.6	0.0	1.8	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
PA-IL	PF07828.7	gi|289597205|ref|YP_003483901.1|	-	0.072	12.8	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	PA-IL-like	protein
RNA_binding	PF01877.12	gi|289597206|ref|YP_003483902.1|	-	6.4e-24	84.2	1.0	8e-24	83.9	0.7	1.1	1	0	0	1	1	1	1	RNA	binding
TrmB	PF01978.14	gi|289597207|ref|YP_003483903.1|	-	1.3e-20	72.8	0.8	4e-20	71.2	0.1	2.1	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
Regulator_TrmB	PF11495.3	gi|289597207|ref|YP_003483903.1|	-	6.1e-08	31.9	0.1	9.2e-08	31.3	0.0	1.3	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
DUF1863	PF08937.6	gi|289597207|ref|YP_003483903.1|	-	0.00095	19.2	0.2	0.0015	18.5	0.1	1.4	1	0	0	1	1	1	1	MTH538	TIR-like	domain	(DUF1863)
Rrf2	PF02082.15	gi|289597207|ref|YP_003483903.1|	-	0.0019	18.2	0.2	0.0075	16.3	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_36	PF13730.1	gi|289597207|ref|YP_003483903.1|	-	0.0021	18.1	0.9	0.01	15.9	0.1	2.5	2	1	1	3	3	3	1	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|289597207|ref|YP_003483903.1|	-	0.0062	16.4	0.1	0.46	10.4	0.0	2.7	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Lant_dehyd_C	PF04738.8	gi|289597207|ref|YP_003483903.1|	-	0.0066	14.7	0.0	0.011	13.9	0.0	1.3	1	0	0	1	1	1	1	Lantibiotic	dehydratase,	C	terminus
DUF2110	PF09883.4	gi|289597207|ref|YP_003483903.1|	-	0.0088	15.6	0.1	0.02	14.4	0.1	1.7	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2110)
MarR	PF01047.17	gi|289597207|ref|YP_003483903.1|	-	0.018	14.7	0.3	0.13	11.9	0.0	2.5	3	0	0	3	3	3	0	MarR	family
HTH_11	PF08279.7	gi|289597207|ref|YP_003483903.1|	-	0.032	13.8	0.1	0.2	11.3	0.0	2.4	2	0	0	2	2	2	0	HTH	domain
PLDc_2	PF13091.1	gi|289597207|ref|YP_003483903.1|	-	0.04	13.6	0.0	0.087	12.5	0.0	1.7	1	0	0	1	1	1	0	PLD-like	domain
HTH_IclR	PF09339.5	gi|289597207|ref|YP_003483903.1|	-	0.041	13.4	0.0	0.11	12.1	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
PadR	PF03551.9	gi|289597207|ref|YP_003483903.1|	-	0.098	12.4	0.0	0.29	10.9	0.0	1.8	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
UME	PF08064.8	gi|289597207|ref|YP_003483903.1|	-	0.18	11.7	1.0	0.64	10.0	0.2	2.1	1	1	0	2	2	2	0	UME	(NUC010)	domain
Borrelia_lipo_1	PF05714.6	gi|289597207|ref|YP_003483903.1|	-	1.8	7.6	8.3	0.39	9.7	1.6	2.7	2	1	1	3	3	3	0	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
Spore_GerAC	PF05504.6	gi|289597207|ref|YP_003483903.1|	-	3.9	7.2	6.9	8.9	6.0	0.2	2.2	1	1	1	2	2	2	0	Spore	germination	B3/	GerAC	like,	C-terminal
Rad50_zn_hook	PF04423.9	gi|289597207|ref|YP_003483903.1|	-	6	6.4	8.0	19	4.8	0.2	3.3	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
Response_reg	PF00072.19	gi|289597208|ref|YP_003483904.1|	-	3.1e-22	78.7	0.3	3.4e-22	78.5	0.2	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
DUF2322	PF10084.4	gi|289597208|ref|YP_003483904.1|	-	0.031	13.9	0.0	0.055	13.1	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2322)
TrkA_N	PF02254.13	gi|289597208|ref|YP_003483904.1|	-	0.13	12.2	0.5	0.32	11.0	0.3	1.6	1	1	0	1	1	1	0	TrkA-N	domain
Amidohydro_3	PF07969.6	gi|289597209|ref|YP_003483905.1|	-	1.6e-44	152.7	0.0	8.6e-44	150.3	0.0	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|289597209|ref|YP_003483905.1|	-	8.4e-10	38.3	0.0	2.3e-09	36.9	0.0	1.8	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|289597209|ref|YP_003483905.1|	-	6.6e-07	29.2	0.0	0.00016	21.4	0.0	2.6	3	0	0	3	3	3	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|289597209|ref|YP_003483905.1|	-	5.3e-05	23.3	0.0	0.11	12.4	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase
PGM_PMM_I	PF02878.11	gi|289597210|ref|YP_003483906.1|	-	1.2e-40	138.1	0.0	2.6e-40	137.0	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|289597210|ref|YP_003483906.1|	-	4e-30	104.2	0.2	1.3e-29	102.5	0.0	2.0	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|289597210|ref|YP_003483906.1|	-	1.7e-29	102.1	0.0	3.5e-29	101.1	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|289597210|ref|YP_003483906.1|	-	2.7e-13	49.6	0.1	9.3e-13	47.9	0.0	1.9	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Na_H_Exchanger	PF00999.16	gi|289597211|ref|YP_003483907.1|	-	2.7e-24	85.4	49.8	3.2e-24	85.1	34.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
AFOR_C	PF01314.13	gi|289597212|ref|YP_003483908.1|	-	2.8e-144	480.5	0.0	3.6e-144	480.1	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|289597212|ref|YP_003483908.1|	-	2.9e-87	291.2	0.8	4.5e-87	290.6	0.5	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
ThiS	PF02597.15	gi|289597213|ref|YP_003483909.1|	-	1.5e-19	70.1	0.2	1.7e-19	70.0	0.1	1.0	1	0	0	1	1	1	1	ThiS	family
DLD	PF14878.1	gi|289597213|ref|YP_003483909.1|	-	0.053	13.6	0.6	0.061	13.4	0.4	1.1	1	0	0	1	1	1	0	Death-like	domain	of	SPT6
Ribosom_S12_S23	PF00164.20	gi|289597213|ref|YP_003483909.1|	-	0.12	11.8	0.1	0.31	10.4	0.0	1.6	1	1	1	2	2	2	0	Ribosomal	protein	S12/S23
Radical_SAM	PF04055.16	gi|289597214|ref|YP_003483910.1|	-	5e-19	69.0	0.1	7.3e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.1	gi|289597214|ref|YP_003483910.1|	-	8e-13	48.5	0.2	8e-13	48.5	0.2	2.3	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.1	gi|289597214|ref|YP_003483910.1|	-	6.6e-07	29.5	0.1	2.9e-06	27.4	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|289597214|ref|YP_003483910.1|	-	1.3e-06	28.4	0.0	2.6e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
IF-2B	PF01008.12	gi|289597215|ref|YP_003483911.1|	-	2e-79	266.5	0.0	2.6e-79	266.1	0.0	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DSPc	PF00782.15	gi|289597215|ref|YP_003483911.1|	-	0.026	14.1	0.0	2.3	7.7	0.1	2.8	2	1	1	3	3	3	0	Dual	specificity	phosphatase,	catalytic	domain
PS_pyruv_trans	PF04230.8	gi|289597215|ref|YP_003483911.1|	-	0.079	12.6	0.0	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
KaiC	PF06745.8	gi|289597217|ref|YP_003483913.1|	-	1.5e-43	148.5	0.1	1.7e-43	148.3	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|289597217|ref|YP_003483913.1|	-	1.4e-16	60.4	0.0	1.7e-16	60.2	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|289597217|ref|YP_003483913.1|	-	3.6e-05	22.7	0.0	8.1e-05	21.6	0.0	1.7	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
RecA	PF00154.16	gi|289597217|ref|YP_003483913.1|	-	0.00044	19.4	0.0	0.002	17.2	0.0	1.8	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
T2SE	PF00437.15	gi|289597217|ref|YP_003483913.1|	-	0.0073	15.2	0.0	0.011	14.7	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_14	PF13173.1	gi|289597217|ref|YP_003483913.1|	-	0.014	15.2	0.2	0.038	13.8	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|289597217|ref|YP_003483913.1|	-	0.018	15.8	0.1	0.063	14.1	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|289597217|ref|YP_003483913.1|	-	0.031	13.7	0.0	0.034	13.5	0.0	1.1	1	0	0	1	1	1	0	AAA-like	domain
TPR_12	PF13424.1	gi|289597218|ref|YP_003483914.1|	-	7.1e-49	163.6	35.5	1e-15	57.4	0.7	7.6	4	1	2	8	8	8	7	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|289597218|ref|YP_003483914.1|	-	9.1e-37	124.5	34.9	8.1e-10	38.2	0.8	7.9	6	2	1	7	7	7	5	TPR	repeat
TPR_1	PF00515.23	gi|289597218|ref|YP_003483914.1|	-	2.1e-33	112.5	43.3	2.9e-08	32.9	0.1	11.9	11	1	1	12	12	12	7	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|289597218|ref|YP_003483914.1|	-	1.2e-25	87.2	51.0	2e-05	24.1	0.4	13.4	13	1	0	13	13	12	7	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|289597218|ref|YP_003483914.1|	-	3.3e-21	73.3	19.7	3.2e-05	23.3	0.0	10.6	10	0	0	10	10	10	5	Tetratricopeptide	repeat
DUF835	PF05763.7	gi|289597218|ref|YP_003483914.1|	-	1e-20	73.6	5.8	1.3e-13	50.7	0.1	3.7	3	1	1	4	4	4	2	Protein	of	unknown	function	(DUF835)
AAA_16	PF13191.1	gi|289597218|ref|YP_003483914.1|	-	2.3e-20	73.3	0.0	1.9e-12	47.5	0.0	2.6	2	0	0	2	2	2	2	AAA	ATPase	domain
TPR_8	PF13181.1	gi|289597218|ref|YP_003483914.1|	-	2.1e-17	61.5	64.2	0.00076	19.0	0.2	13.3	13	2	0	13	13	13	5	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|289597218|ref|YP_003483914.1|	-	3.1e-17	61.5	2.7	0.15	12.7	0.0	10.8	8	3	3	11	11	10	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|289597218|ref|YP_003483914.1|	-	4.2e-14	52.7	2.4	0.0018	18.9	0.2	7.7	4	2	4	8	8	8	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|289597218|ref|YP_003483914.1|	-	3e-13	49.8	19.2	0.003	17.8	0.0	8.0	7	3	3	10	10	7	5	Tetratricopeptide	repeat
SNAP	PF14938.1	gi|289597218|ref|YP_003483914.1|	-	4.7e-12	45.6	27.3	1.1e-05	24.7	1.6	4.3	2	1	2	4	4	4	4	Soluble	NSF	attachment	protein,	SNAP
TPR_10	PF13374.1	gi|289597218|ref|YP_003483914.1|	-	5.2e-12	45.2	17.7	0.0002	21.2	0.0	7.9	8	1	1	9	9	8	4	Tetratricopeptide	repeat
RPN7	PF10602.4	gi|289597218|ref|YP_003483914.1|	-	4.4e-08	32.7	27.4	0.0067	15.8	0.1	6.3	2	1	4	6	6	6	3	26S	proteasome	subunit	RPN7
Apc3	PF12895.2	gi|289597218|ref|YP_003483914.1|	-	1.1e-07	31.8	35.1	0.012	15.7	1.6	6.7	4	1	2	6	6	6	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_17	PF13431.1	gi|289597218|ref|YP_003483914.1|	-	1.7e-07	30.8	18.2	0.5	10.6	0.0	9.6	9	0	0	9	9	9	1	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|289597218|ref|YP_003483914.1|	-	9e-07	28.6	0.9	0.21	11.4	0.0	5.8	4	1	1	6	6	5	1	Tetratricopeptide	repeat
AAA_22	PF13401.1	gi|289597218|ref|YP_003483914.1|	-	9.6e-06	25.7	0.6	0.00032	20.8	0.0	3.1	3	0	0	3	3	2	1	AAA	domain
Apc5	PF12862.2	gi|289597218|ref|YP_003483914.1|	-	3.5e-05	23.5	7.2	0.049	13.4	0.1	4.3	1	1	2	3	3	3	2	Anaphase-promoting	complex	subunit	5
Foie-gras_1	PF11817.3	gi|289597218|ref|YP_003483914.1|	-	4.7e-05	22.9	16.0	0.051	13.0	0.4	4.2	2	1	1	3	3	3	2	Foie	gras	liver	health	family	1
TPR_6	PF13174.1	gi|289597218|ref|YP_003483914.1|	-	4.8e-05	23.5	23.9	0.36	11.4	0.1	9.6	11	1	0	11	11	9	2	Tetratricopeptide	repeat
AAA_14	PF13173.1	gi|289597218|ref|YP_003483914.1|	-	7.1e-05	22.7	0.2	7.1e-05	22.7	0.1	4.0	3	1	0	4	4	4	1	AAA	domain
AAA	PF00004.24	gi|289597218|ref|YP_003483914.1|	-	0.0023	18.1	0.0	0.0088	16.2	0.0	2.1	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|289597218|ref|YP_003483914.1|	-	0.0044	15.9	0.2	0.17	10.6	0.0	2.8	2	0	0	2	2	2	1	NB-ARC	domain
Rapsyn_N	PF10579.4	gi|289597218|ref|YP_003483914.1|	-	0.023	14.5	8.2	2.1	8.2	0.0	5.8	6	1	0	6	6	6	0	Rapsyn	N-terminal	myristoylation	and	linker	region
Zeta_toxin	PF06414.7	gi|289597218|ref|YP_003483914.1|	-	0.024	13.7	0.1	8.3	5.4	0.0	2.9	3	0	0	3	3	3	0	Zeta	toxin
STAS	PF01740.16	gi|289597218|ref|YP_003483914.1|	-	0.06	12.7	0.1	0.68	9.3	0.0	2.7	2	1	1	3	3	3	0	STAS	domain
Sigma54_activ_2	PF14532.1	gi|289597218|ref|YP_003483914.1|	-	0.084	12.9	0.0	18	5.4	0.0	2.8	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|289597218|ref|YP_003483914.1|	-	0.093	12.3	0.0	0.22	11.1	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
PLU-1	PF08429.6	gi|289597218|ref|YP_003483914.1|	-	1.1	8.0	5.4	0.17	10.7	0.1	2.3	3	0	0	3	3	3	0	PLU-1-like	protein
AdoHcyase	PF05221.12	gi|289597219|ref|YP_003483915.1|	-	1e-56	191.8	0.1	1.3e-56	191.5	0.1	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|289597219|ref|YP_003483915.1|	-	1.4e-49	168.0	1.6	5.3e-49	166.1	1.0	1.9	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|289597219|ref|YP_003483915.1|	-	3.1e-09	36.4	0.3	2.2e-08	33.6	0.1	2.0	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.14	gi|289597219|ref|YP_003483915.1|	-	1.3e-08	34.2	0.5	3.5e-08	32.7	0.3	1.8	1	1	1	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|289597219|ref|YP_003483915.1|	-	6.8e-05	22.8	0.5	0.0015	18.5	0.2	2.9	2	1	0	2	2	2	1	TrkA-N	domain
F420_oxidored	PF03807.12	gi|289597219|ref|YP_003483915.1|	-	0.00072	19.9	0.2	0.0017	18.7	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
THF_DHG_CYH_C	PF02882.14	gi|289597219|ref|YP_003483915.1|	-	0.0042	16.1	1.1	0.026	13.5	0.7	2.0	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Shikimate_DH	PF01488.15	gi|289597219|ref|YP_003483915.1|	-	0.0064	16.5	0.4	0.03	14.4	0.2	2.1	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.13	gi|289597219|ref|YP_003483915.1|	-	0.0096	15.5	2.9	0.69	9.5	0.9	2.8	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|289597219|ref|YP_003483915.1|	-	0.025	14.5	0.2	0.097	12.6	0.1	2.0	2	0	0	2	2	2	0	NADH(P)-binding
NAD_binding_7	PF13241.1	gi|289597219|ref|YP_003483915.1|	-	0.028	14.6	0.2	0.073	13.3	0.1	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|289597219|ref|YP_003483915.1|	-	0.061	12.8	1.4	0.4	10.2	0.9	2.4	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
MFS_1	PF07690.11	gi|289597220|ref|YP_003483916.1|	-	2.2e-41	141.7	51.9	7.3e-27	93.9	20.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|289597220|ref|YP_003483916.1|	-	3.1e-33	115.0	31.6	8.6e-28	97.0	8.0	2.5	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|289597220|ref|YP_003483916.1|	-	5e-06	25.1	6.4	5e-06	25.1	4.4	3.4	1	1	1	3	3	3	1	MFS/sugar	transport	protein
MFS_3	PF05977.8	gi|289597220|ref|YP_003483916.1|	-	0.11	10.6	8.2	0.027	12.6	0.7	2.3	2	1	0	2	2	2	0	Transmembrane	secretion	effector
Mur_ligase_M	PF08245.7	gi|289597221|ref|YP_003483917.1|	-	9.6e-15	55.1	0.0	2e-14	54.0	0.0	1.6	1	1	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.16	gi|289597221|ref|YP_003483917.1|	-	3.2e-06	27.0	0.1	5.3e-05	23.1	0.1	2.5	1	1	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
WhiA_N	PF10298.4	gi|289597221|ref|YP_003483917.1|	-	0.032	14.0	0.4	8.8	6.2	0.0	3.4	2	1	1	3	3	3	0	WhiA	N-terminal	LAGLIDADG-like	domain
MMR_HSR1	PF01926.18	gi|289597222|ref|YP_003483918.1|	-	6.6e-16	58.3	0.5	2.4e-15	56.5	0.1	2.2	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
GTP-bdg_N	PF13167.1	gi|289597222|ref|YP_003483918.1|	-	1.2e-12	47.7	1.5	1.2e-12	47.7	1.1	2.6	3	1	1	4	4	3	1	GTP-binding	GTPase	N-terminal
FeoB_N	PF02421.13	gi|289597222|ref|YP_003483918.1|	-	3.6e-05	23.0	0.5	0.00017	20.8	0.3	2.1	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|289597222|ref|YP_003483918.1|	-	0.00014	21.3	3.9	0.15	11.5	0.1	3.1	3	1	0	3	3	3	2	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|289597222|ref|YP_003483918.1|	-	0.00023	21.0	1.1	0.041	13.7	0.0	3.2	2	2	2	4	4	4	1	Dynamin	family
PduV-EutP	PF10662.4	gi|289597222|ref|YP_003483918.1|	-	0.0003	20.3	1.0	0.0017	17.8	0.7	2.1	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Miro	PF08477.8	gi|289597222|ref|YP_003483918.1|	-	0.0068	16.8	0.0	0.027	14.9	0.0	2.1	1	1	0	1	1	1	1	Miro-like	protein
Caldesmon	PF02029.10	gi|289597222|ref|YP_003483918.1|	-	0.019	13.4	1.4	0.03	12.7	0.9	1.2	1	0	0	1	1	1	0	Caldesmon
ABC_tran	PF00005.22	gi|289597222|ref|YP_003483918.1|	-	0.023	15.0	0.4	0.064	13.5	0.2	2.0	1	1	1	2	2	2	0	ABC	transporter
AAA_17	PF13207.1	gi|289597222|ref|YP_003483918.1|	-	0.073	13.8	9.4	0.35	11.7	0.0	3.3	3	1	0	3	3	3	0	AAA	domain
TroA	PF01297.12	gi|289597222|ref|YP_003483918.1|	-	0.09	12.0	0.1	0.24	10.6	0.1	1.7	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
MobB	PF03205.9	gi|289597222|ref|YP_003483918.1|	-	0.21	11.2	0.1	0.21	11.2	0.1	2.6	3	0	0	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF4600	PF15372.1	gi|289597222|ref|YP_003483918.1|	-	0.53	10.4	6.4	6.8	6.9	0.2	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4600)
AAA_23	PF13476.1	gi|289597222|ref|YP_003483918.1|	-	2.6	8.3	19.8	2.1	8.6	4.8	2.8	1	1	1	2	2	2	0	AAA	domain